##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM20383v1
#!genome-build-accession NCBI_Assembly:GCF_000203835.1
##sequence-region NC_003888.3 1 8667507
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=100226
NC_003888.3	RefSeq	region	1	8667507	.	+	.	ID=id0;Dbxref=taxon:100226;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;old-name=Streptomyces coelicolor;serovar=A3(2)
NC_003888.3	RefSeq	sequence_feature	1	21653	.	+	.	ID=id1;Note=TIR-L. Left hand chromosome end terminal inveretd repeat.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	435	440	.	+	.	ID=id2;gbkey=RBS
NC_003888.3	RefSeq	gene	446	1123	.	+	.	ID=gene0;Dbxref=GeneID:1095448;Name=SCEND.02c;gbkey=Gene;gene=SCEND.02c;gene_biotype=protein_coding;gene_synonym=SCEND.02c;locus_tag=SCO0001
NC_003888.3	RefSeq	CDS	446	1123	.	+	0	ID=cds0;Parent=gene0;Dbxref=Genbank:NP_624362.1,GeneID:1095448;Name=NP_624362.1;Note=SCEND.02c%2C unknown%2C doubtful CDS%2C len: 225aa;gbkey=CDS;gene=SCEND.02c;product=hypothetical protein;protein_id=NP_624362.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1238	1243	.	+	.	ID=id3;gbkey=RBS
NC_003888.3	RefSeq	gene	1252	3813	.	+	.	ID=gene1;Dbxref=GeneID:1095447;Name=SC8E7.42c;gbkey=Gene;gene=SC8E7.42c;gene_biotype=protein_coding;gene_synonym=SC8E7.42c,SCEND.01c,SCJ24.01c;locus_tag=SCO0002
NC_003888.3	RefSeq	CDS	1252	3813	.	+	0	ID=cds1;Parent=gene1;Dbxref=Genbank:NP_624363.1,GeneID:1095447;Name=NP_624363.1;Note=SCEND.01c%2C unknown%2C partial CDS%2C len: >27aa%3B strongly similar to TR:AAF36550 (EMBL:AF194023) helicase-like protein from Streptomyces lividans (881 aa) fasta scores%3B opt: 114%2C z-score: 206.0%2C E(): 0.00052%2C 80.0%25 identity in 25 aa overlap.~SCJ24.01c%2C unknown%2C partial CDS%2C len: >457aa%3B strongly similar to TR:AAF36550 (EMBL:AF194023) helicase-like protein from Streptomyces lividans (881 aa) fasta scores%3B opt: 2191%2C z-score: 2490.1%2C E(): 0%2C 72.5%25 identity in 458 aa overlap.~SC8E7.42c%2C partial CDS%2C unknown%2C len:> 431 aa. Highly similar to Streptomyces lividans TR:AAF36550(EMBL:AF194023) helicase-like protein found in the chromosome terminal region (881 aa)%2C fasta scores opt: 1940 z-score: 2170.3 E():0 66.9%25 identity in 438 aa overlap.;gbkey=CDS;gene=SC8E7.42c;product=hypothetical protein;protein_id=NP_624363.1;transl_table=11
NC_003888.3	RefSeq	gene	3869	6220	.	+	.	ID=gene2;Dbxref=GeneID:1095446;Name=SC8E7.41c;gbkey=Gene;gene=SC8E7.41c;gene_biotype=protein_coding;gene_synonym=SC8E7.41c;locus_tag=SCO0003
NC_003888.3	RefSeq	CDS	3869	6220	.	+	0	ID=cds2;Parent=gene2;Dbxref=Genbank:NP_624364.1,GeneID:1095446;Name=NP_624364.1;Note=SC8E7.41c%2C possible DNA-binding protein%2C len: 783 aa. Contains a helix-turn-helix motif situated between residues 69..90 (+3.17 SD).;gbkey=CDS;gene=SC8E7.41c;product=DNA-binding protein;protein_id=NP_624364.1;transl_table=11
NC_003888.3	RefSeq	gene	6226	7173	.	+	.	ID=gene3;Dbxref=GeneID:1095445;Name=SC1C9.01;gbkey=Gene;gene=SC1C9.01;gene_biotype=protein_coding;gene_synonym=SC1C9.01,SC8E7.40c;locus_tag=SCO0004
NC_003888.3	RefSeq	CDS	6226	7173	.	+	0	ID=cds3;Parent=gene3;Dbxref=Genbank:NP_631871.1,GeneID:1095445;Name=NP_631871.1;Note=SC8E7.40c%2C unknown%2C len: 315 aa.~SC1C9.01%2C hypothetical protein (fragment)%2C len: >64 aa%3B identical to C-terminal part of TR:Q9FBV5 (EMBL:AL391338) Streptomyces coelicolor hypothetical 33.7 kDa protein SC8E7.40c%2C 315 aa%2C situated on the opposite end of the chromosome;gbkey=CDS;gene=SC1C9.01;product=hypothetical protein;protein_id=NP_631871.1;transl_table=11
NC_003888.3	RefSeq	gene	7187	9307	.	+	.	ID=gene4;Dbxref=GeneID:1095444;Name=SC1C9.02;gbkey=Gene;gene=SC1C9.02;gene_biotype=protein_coding;gene_synonym=SC1C9.02;locus_tag=SCO0005
NC_003888.3	RefSeq	CDS	7187	9307	.	+	0	ID=cds4;Parent=gene4;Dbxref=Genbank:NP_733487.1,GeneID:1095444;Name=NP_733487.1;Note=SC1C9.02%2C possible transposase%2C len: 706 aa%3B identical to TR:Q9FBV6 (EMBL:AL391338) Streptomyces coelicolor transposase SC9E7.39c%2C 706 aa%2C situated on the opposite end of the chromosome. Contains Pfam match to entry PF00665 rve%2C Integrase core domain;gbkey=CDS;gene=SC1C9.02;product=transposase;protein_id=NP_733487.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8231	8623	.	+	.	ID=id4;Dbxref=GeneID:1095444;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 47.20%2C E-value 1.8e-12;gbkey=misc_feature;gene=SC1C9.02
NC_003888.3	RefSeq	gene	9304	10410	.	+	.	ID=gene5;Dbxref=GeneID:1095443;Name=SC1C9.03;gbkey=Gene;gene=SC1C9.03;gene_biotype=protein_coding;gene_synonym=SC1C9.03,SCJ30.01;locus_tag=SCO0006
NC_003888.3	RefSeq	CDS	9304	10410	.	+	0	ID=cds5;Parent=gene5;Dbxref=Genbank:NP_631869.1,GeneID:1095443;Name=NP_631869.1;Note=SC1C9.03%2C possible ATP/GTP-binding protein (fragment)%2C len: >223 aa%3B identical to N-terminal part of TR:Q9FBV7 (EMBL:AL391338) Streptomyces coelicolor ATP/GTP-binding protein%2C 368 aa%3B situated on the opposite end of the chromosome. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop)~SCJ30.01%2C partial CDS%2C unknown%2C len: >183 aa%3B weakly similar to the C-terminal half of suspected transposition related nucleotide binding proteins eg. TR:Q57461 (EMBL:U49101) TniB delta1 from plasmid pVS1 (286 aa) fasta scores%3B opt: 133%2C z-score: 170.1%2C E(): 0.041%2C (29.7%25 identity in 148 aa overlap).;gbkey=CDS;gene=SC1C9.03;product=ATP/GTP-binding protein;protein_id=NP_631869.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	9646	9669	.	+	.	ID=id5;Dbxref=GeneID:1095443;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1C9.03
NC_003888.3	RefSeq	gene	10554	11000	.	-	.	ID=gene6;Dbxref=GeneID:1095442;Name=SCJ30.02c;gbkey=Gene;gene=SCJ30.02c;gene_biotype=protein_coding;gene_synonym=SCJ30.02c;locus_tag=SCO0007
NC_003888.3	RefSeq	CDS	10554	11000	.	-	0	ID=cds6;Parent=gene6;Dbxref=Genbank:NP_624368.1,GeneID:1095442;Name=NP_624368.1;Note=SCJ30.02c%2C unknown%2C len: 148 aa;gbkey=CDS;gene=SCJ30.02c;product=hypothetical protein;protein_id=NP_624368.1;transl_table=11
NC_003888.3	RefSeq	gene	11010	11360	.	-	.	ID=gene7;Dbxref=GeneID:1095440;Name=SCJ30.03c;gbkey=Gene;gene=SCJ30.03c;gene_biotype=protein_coding;gene_synonym=SCJ30.03c;locus_tag=SCO0008
NC_003888.3	RefSeq	CDS	11010	11360	.	-	0	ID=cds7;Parent=gene7;Dbxref=Genbank:NP_624369.1,GeneID:1095440;Name=NP_624369.1;Note=SCJ30.03c%2C unknown%2C len: 116 aa;gbkey=CDS;gene=SCJ30.03c;product=hypothetical protein;protein_id=NP_624369.1;transl_table=11
NC_003888.3	RefSeq	gene	11617	11952	.	-	.	ID=gene8;Dbxref=GeneID:1095441;Name=SCJ30.04c;gbkey=Gene;gene=SCJ30.04c;gene_biotype=protein_coding;gene_synonym=SCJ30.04c;locus_tag=SCO0009
NC_003888.3	RefSeq	CDS	11617	11952	.	-	0	ID=cds8;Parent=gene8;Dbxref=Genbank:NP_624370.1,GeneID:1095441;Name=NP_624370.1;Note=SCJ30.04c%2C improbable CDS%2C function unknown%2C len: 111 aa%3B predicted by GC frameplot and amino acid usage.;gbkey=CDS;gene=SCJ30.04c;product=hypothetical protein;protein_id=NP_624370.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	12078	12122	.	+	.	ID=id6;Note=Inverted and repeated at 3791-3835bp.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	12366	13457	.	+	.	ID=gene9;Dbxref=GeneID:1095439;Name=SCJ30.05;gbkey=Gene;gene=SCJ30.05;gene_biotype=protein_coding;gene_synonym=SCJ30.05;locus_tag=SCO0010
NC_003888.3	RefSeq	CDS	12366	13457	.	+	0	ID=cds9;Parent=gene9;Dbxref=Genbank:NP_624371.1,GeneID:1095439;Name=NP_624371.1;Note=SCJ30.05%2C unknown (hypothetical protein)%2C len: 362 aa%3B region of similarity to TR:CAB41280 (EMBL:AL049707) transferase from Streptomyces coelicolor (448 aa) fasta scores%3B opt: 411%2C z-score: 409.4%2C E(): 1.9e-15%2C (32.8%25 identity in 274 aa overlap). Contains leucine TTA codon%2C possible target for bldA regulation. Note large overlap with downstream CDS.;gbkey=CDS;gene=SCJ30.05;product=hypothetical protein;protein_id=NP_624371.1;transl_table=11
NC_003888.3	RefSeq	gene	13214	14023	.	-	.	ID=gene10;Dbxref=GeneID:1095438;Name=SCJ30.06c;gbkey=Gene;gene=SCJ30.06c;gene_biotype=protein_coding;gene_synonym=SCJ30.06c;locus_tag=SCO0011
NC_003888.3	RefSeq	CDS	13214	14023	.	-	0	ID=cds10;Parent=gene10;Dbxref=Genbank:NP_624372.1,GeneID:1095438;Name=NP_624372.1;Note=SCJ30.06c%2C unknown%2C len: 269 aa%3B predicted amino acid usage. Note large overlap with downstream CDS.;gbkey=CDS;gene=SCJ30.06c;product=hypothetical protein;protein_id=NP_624372.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	13260	13262	.	+	.	ID=id7;Dbxref=GeneID:1095439;Note=Leucine tta codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCJ30.05
NC_003888.3	RefSeq	repeat_region	13648	13692	.	+	.	ID=id8;Note=Inverted and repeated at 2221-2265bp.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	14044	14454	.	-	.	ID=gene11;Dbxref=GeneID:1095452;Name=SCJ30.07c;gbkey=Gene;gene=SCJ30.07c;gene_biotype=protein_coding;gene_synonym=SCJ30.07c;locus_tag=SCO0012
NC_003888.3	RefSeq	CDS	14044	14454	.	-	0	ID=cds11;Parent=gene11;Dbxref=Genbank:NP_624373.1,GeneID:1095452;Name=NP_624373.1;Note=SCJ30.07c%2C unknown%2C len: 136 aa%3B predicted by GC Frameplot%2C Hidden Markov model and amino acid usage.;gbkey=CDS;gene=SCJ30.07c;product=hypothetical protein;protein_id=NP_624373.1;transl_table=11
NC_003888.3	RefSeq	gene	14739	15029	.	-	.	ID=gene12;Dbxref=GeneID:1095453;Name=SCJ30.09c;gbkey=Gene;gene=SCJ30.09c;gene_biotype=protein_coding;gene_synonym=SCJ30.09c;locus_tag=SCO0013
NC_003888.3	RefSeq	CDS	14739	15029	.	-	0	ID=cds12;Parent=gene12;Dbxref=Genbank:NP_624374.1,GeneID:1095453;Name=NP_624374.1;Note=SCJ30.09c%2C unknown%2C len: 96 aa%3B predicted by GC Frameplot%2C Hidden Markov model and amino acid usage%3B similar to the C-terminal region of the SCP1 plasmid borne TR:Q9ACW6 (EMBL:AL590464) Streptomyces coelicolor conserved hypothetical protein SCP1.185%2C 184 aa%3B fasta scores: opt: 442 Z-score: 592.9 E(): 2.1e-25%3B 84.615%25 identity in 78 aa overlap;gbkey=CDS;gene=SCJ30.09c;product=hypothetical protein;protein_id=NP_624374.1;transl_table=11
NC_003888.3	RefSeq	gene	15317	15595	.	-	.	ID=gene13;Dbxref=GeneID:1095449;Name=SCJ30.10c;gbkey=Gene;gene=SCJ30.10c;gene_biotype=protein_coding;gene_synonym=SCJ30.10c;locus_tag=SCO0014
NC_003888.3	RefSeq	CDS	15317	15595	.	-	0	ID=cds13;Parent=gene13;Dbxref=Genbank:NP_624375.1,GeneID:1095449;Name=NP_624375.1;Note=SCJ30.10c%2C unknown%2C len: 92 aa%3B predicted by GC Frameplot%2C Hidden Markov model and amino acid usage%3B highly similar to the SCP1 plasmid borne TR:Q9ACW7 (EMBL:AL590464) Streptomyces coelicolor conserved hypothetical protein SCP1.184%2C 92 aa%3B fasta scores: opt: 499 Z-score: 653.4 E(): 9.2e-29%3B 81.522%25 identity in 92 aa overlap. Contains leucine TTA codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCJ30.10c;product=hypothetical protein;protein_id=NP_624375.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	15587	15589	.	-	.	ID=id9;Dbxref=GeneID:1095449;Note=Leucine tta codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCJ30.10c
NC_003888.3	RefSeq	gene	16070	17302	.	-	.	ID=gene14;Dbxref=GeneID:1095436;Name=SCJ30.11c;gbkey=Gene;gene=SCJ30.11c;gene_biotype=protein_coding;gene_synonym=SCJ30.11c;locus_tag=SCO0015
NC_003888.3	RefSeq	CDS	16070	17302	.	-	0	ID=cds14;Parent=gene14;Dbxref=Genbank:NP_624376.1,GeneID:1095436;Name=NP_624376.1;Note=SCJ30.11c%2C possible Na+/H+ antiporter%2C len: 410 aa%3B similar to many eg. TR:Q56580 (EMBL:D25214) Na+/H+ antiporter from Vibrio alginolyticus (383 aa) fasta scores%3B opt: 536%2C z-score: 594.7%2C E(): 9.1e-26%2C (38.5%25 identity in 384 aa overlap). Also similar to TR:CAB38501 (EMBL:AL035636) Na+/H+ antiporter from Streptomyces coelicolor (474 aa) fasta scores%3B opt: 968%2C z-score: 1067.2%2C E(): 0%2C (52.2%25 identity in 404 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCJ30.11c;product=Na+/H+ antiporter;protein_id=NP_624376.1;transl_table=11
NC_003888.3	RefSeq	gene	17715	17918	.	+	.	ID=gene15;Dbxref=GeneID:1095450;Name=SCJ30.12;gbkey=Gene;gene=SCJ30.12;gene_biotype=protein_coding;gene_synonym=SCJ30.12;locus_tag=SCO0016
NC_003888.3	RefSeq	CDS	17715	17918	.	+	0	ID=cds15;Parent=gene15;Dbxref=Genbank:NP_624377.1,GeneID:1095450;Name=NP_624377.1;Note=SCJ30.12%2C unknown%2C len: 67 aa%3B predicted by GC Frameplot%2C Hidden Markov model and amino acid usage.;gbkey=CDS;gene=SCJ30.12;product=hypothetical protein;protein_id=NP_624377.1;transl_table=11
NC_003888.3	RefSeq	gene	17919	18263	.	+	.	ID=gene16;Dbxref=GeneID:1095451;Name=SCJ30.13;gbkey=Gene;gene=SCJ30.13;gene_biotype=protein_coding;gene_synonym=SCJ30.13;locus_tag=SCO0017
NC_003888.3	RefSeq	CDS	17919	18263	.	+	0	ID=cds16;Parent=gene16;Dbxref=Genbank:NP_624378.1,GeneID:1095451;Name=NP_624378.1;Note=SCJ30.13%2C unknown%2C len: 114 aa%3B predicted by GC Frameplot%2C Hidden Markov model and amino acid usage.;gbkey=CDS;gene=SCJ30.13;product=hypothetical protein;protein_id=NP_624378.1;transl_table=11
NC_003888.3	RefSeq	gene	18485	19351	.	-	.	ID=gene17;Dbxref=GeneID:1095454;Name=SCJ30.14c;gbkey=Gene;gene=SCJ30.14c;gene_biotype=protein_coding;gene_synonym=SCJ30.14c;locus_tag=SCO0018
NC_003888.3	RefSeq	CDS	18485	19351	.	-	0	ID=cds17;Parent=gene17;Dbxref=Genbank:NP_624379.1,GeneID:1095454;Name=NP_624379.1;Note=SCJ30.14c%2C hypothetical protein%2C len: 228 aa%3B predicted by GC Frameplot%2C Hidden Markov model and amino acid usage. Has regions of similarity to SCJ4.39 hypothetical protein from the overlapping Streptomyces coelicolor cosmid J4 (EMBL:AL109950) fasta scores%3B opt: 334%2C z-score: 359.9%2C E(): 8.2e-15%2C (41.6%25 identity in 245 aa overlap).;gbkey=CDS;gene=SCJ30.14c;product=hypothetical protein;protein_id=NP_624379.1;transl_table=11
NC_003888.3	RefSeq	gene	19517	19771	.	-	.	ID=gene18;Dbxref=GeneID:1095455;Name=SCJ30.15c;gbkey=Gene;gene=SCJ30.15c;gene_biotype=protein_coding;gene_synonym=SCJ30.15c;locus_tag=SCO0019
NC_003888.3	RefSeq	CDS	19517	19771	.	-	0	ID=cds18;Parent=gene18;Dbxref=Genbank:NP_624380.1,GeneID:1095455;Name=NP_624380.1;Note=SCJ30.15c%2C improbable CDS%2C function unknown%2C len: 115 aa%3B predicted by amino acid usage.;gbkey=CDS;gene=SCJ30.15c;product=hypothetical protein;protein_id=NP_624380.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	19911	21168	.	+	.	ID=id10;Note=possible insertion sequence.;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	19911	19973	.	+	.	ID=id11;Note=possible inverted repeat bounding insertion sequence.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	19974	21620	.	+	.	ID=gene19;Dbxref=GeneID:1095437;Name=SCJ30.16;gbkey=Gene;gene=SCJ30.16;gene_biotype=protein_coding;gene_synonym=SCJ30.16,SCJ4.01;locus_tag=SCO0020
NC_003888.3	RefSeq	CDS	19974	21620	.	+	0	ID=cds19;Parent=gene19;Dbxref=Genbank:NP_733488.1,GeneID:1095437;Name=NP_733488.1;Note=SCJ4.01%2C partial CDS%2C possible transposase%2C len: >183 aa%3B similar to TR:Q9R2U8(EMBL:AL133236) transposase from Streptomyces coelicolor (501 aa) fasta scores%2C opt: 267 z-score: 317.3 E(): 3.4e-10 33.9%25 identity in 168 aa overlap and TR:O69919 (EMBL:AL023861) hypothetical protein from Streptomyces coelicolor (188 aa) fasta scores%3B opt: 419%2C z-score: 501.4%2C E(): 1.4e-20%2C (45.9%25 identity in 159 aa overlap). Overlaps and extends into CDS SCJ30.16 on the adjoining cosmid.~SCJ30.16%2C partial CDS%2C possible transposase%2C len: >397 aa%3B varying regions and lengths of similarity to many eg. SW:TRA1_BORPA transposase from IS1001 of Bordetella parapertussis (406 aa) fasta scores%3B opt: 203%2C z-score: 236.1%2C E(): 8.7e-06%2C (28.4%25 identity in 215 aa overlap). Also contains short region of similarity to TR:O69919 (EMBL:AL023861) hypothetical protein from Streptomyces coelicolor (188 aa) fasta scores%3B opt: 248%2C z-score: 292.3%2C E(): 6.4e-09%2C (68.1%25 identity in 47 aa overlap). Contains possible helix-turn-helix motif (+4.11 SD) 308-329 aa. Also contains TTA leucine%2C possible target for bldA regulation.;gbkey=CDS;gene=SCJ30.16;product=transposase;protein_id=NP_733488.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	20016	20018	.	+	.	ID=id12;Dbxref=GeneID:1095437;Note=tta leucine%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCJ30.16
NC_003888.3	RefSeq	sequence_feature	21068	21650	.	+	.	ID=id13;Note=possible insertion sequence.;gbkey=misc_feature;partial=true;start_range=.,21068
NC_003888.3	RefSeq	sequence_feature	21588	21650	.	+	.	ID=id14;Note=possible inverted repeat bounding insertion sequence.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	21617	22210	.	+	.	ID=gene20;Dbxref=GeneID:1095456;Name=SCJ4.02;gbkey=Gene;gene=SCJ4.02;gene_biotype=protein_coding;gene_synonym=SCJ4.02;locus_tag=SCO0021
NC_003888.3	RefSeq	CDS	21617	22210	.	+	0	ID=cds20;Parent=gene20;Dbxref=Genbank:NP_624381.1,GeneID:1095456;Name=NP_624381.1;Note=SCJ4.02%2C unknown%2C len: 197 aa;gbkey=CDS;gene=SCJ4.02;product=hypothetical protein;protein_id=NP_624381.1;transl_table=11
NC_003888.3	RefSeq	gene	22156	22761	.	-	.	ID=gene21;Dbxref=GeneID:1095457;Name=SCJ4.03c;gbkey=Gene;gene=SCJ4.03c;gene_biotype=protein_coding;gene_synonym=SCJ4.03c,SCJ4.04c,SCJ4.05c,SCO0023,SCO0024;locus_tag=SCO0022
NC_003888.3	RefSeq	CDS	22624	22761	.	-	0	ID=cds21;Parent=gene21;Dbxref=Genbank:NP_624382.1,GeneID:1095457;Name=NP_624382.1;Note=SCJ4.03c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 47 aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 132%2C z-score: 207.1%2C E(): 0.00035%2C (53.8%25 identity in 39 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 224%2C z-score: 343.7%2C E(): 8.7e-12%2C (72.3%25 identity in 47 aa overlap)~SCJ4.04c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 47aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 193%2C z-score: 314.5%2C E(): 3.7e-10%2C (55.3%25 identity in 47 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 273%2C z-score: 440.0%2C E(): 3.8e-17%2C (91.5%25 identity in 47 aa overlap).~SCJ4.05c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 46aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 150%2C z-score: 245.0%2C E(): 2.7e-06%2C (43.5%25 identity in 46 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 250%2C z-score: 400.5%2C E(): 6e-15%2C (78.3%25 identity in 46 aa overlap).;end_range=22761,.;gbkey=CDS;gene=SCJ4.03c;partial=true;product=IS element ATP-binding protein;protein_id=NP_624382.1;transl_table=11
NC_003888.3	RefSeq	CDS	22290	22430	.	-	0	ID=cds21;Parent=gene21;Dbxref=Genbank:NP_624382.1,GeneID:1095457;Name=NP_624382.1;Note=SCJ4.03c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 47 aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 132%2C z-score: 207.1%2C E(): 0.00035%2C (53.8%25 identity in 39 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 224%2C z-score: 343.7%2C E(): 8.7e-12%2C (72.3%25 identity in 47 aa overlap)~SCJ4.04c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 47aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 193%2C z-score: 314.5%2C E(): 3.7e-10%2C (55.3%25 identity in 47 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 273%2C z-score: 440.0%2C E(): 3.8e-17%2C (91.5%25 identity in 47 aa overlap).~SCJ4.05c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 46aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 150%2C z-score: 245.0%2C E(): 2.7e-06%2C (43.5%25 identity in 46 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 250%2C z-score: 400.5%2C E(): 6e-15%2C (78.3%25 identity in 46 aa overlap).;gbkey=CDS;gene=SCJ4.03c;partial=true;product=IS element ATP-binding protein;protein_id=NP_624382.1;transl_table=11
NC_003888.3	RefSeq	CDS	22156	22299	.	-	0	ID=cds21;Parent=gene21;Dbxref=Genbank:NP_624382.1,GeneID:1095457;Name=NP_624382.1;Note=SCJ4.03c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 47 aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 132%2C z-score: 207.1%2C E(): 0.00035%2C (53.8%25 identity in 39 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 224%2C z-score: 343.7%2C E(): 8.7e-12%2C (72.3%25 identity in 47 aa overlap)~SCJ4.04c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 47aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 193%2C z-score: 314.5%2C E(): 3.7e-10%2C (55.3%25 identity in 47 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 273%2C z-score: 440.0%2C E(): 3.8e-17%2C (91.5%25 identity in 47 aa overlap).~SCJ4.05c%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 46aa%3B similar to regions of many eg. SW:ISTB_ECOLI IS element ATP-binding protein from Escherichia coli (265 aa) fasta scores%3B opt: 150%2C z-score: 245.0%2C E(): 2.7e-06%2C (43.5%25 identity in 46 aa overlap). Also similar to TR:O69925 (EMBL:AL023861) IS element ATP-binding protein from Streptomyces coelicolor (256 aa) fasta scores%3B opt: 250%2C z-score: 400.5%2C E(): 6e-15%2C (78.3%25 identity in 46 aa overlap).;gbkey=CDS;gene=SCJ4.03c;partial=true;product=IS element ATP-binding protein;protein_id=NP_624382.1;transl_table=11
NC_003888.3	RefSeq	gene	22843	23061	.	+	.	ID=gene22;Dbxref=GeneID:1095458;Name=SCJ4.06;gbkey=Gene;gene=SCJ4.06;gene_biotype=protein_coding;gene_synonym=SCJ4.06;locus_tag=SCO0025
NC_003888.3	RefSeq	CDS	22843	23061	.	+	0	ID=cds22;Parent=gene22;Dbxref=Genbank:NP_624383.1,GeneID:1095458;Name=NP_624383.1;Note=SCJ4.06%2C partial CDS%2C possible IS element ATP-binding protein%2C len: 46aa%3B similar to regions of many eg. TR:BAA78797 (EMBL:AP000342) NTP-binding protein from IS element of plasmid R100 (261 aa) fasta scores%3B opt: 113%2C z-score: 154.6%2C E(): 0.3%2C (36.4%25 identity in 55 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCJ4.06;product=IS element ATP-binding protein;protein_id=NP_624383.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	22915	22938	.	+	.	ID=id15;Dbxref=GeneID:1095458;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCJ4.06
NC_003888.3	RefSeq	gene	23316	23831	.	+	.	ID=gene23;Dbxref=GeneID:1095459;Name=SCJ4.07;gbkey=Gene;gene=SCJ4.07;gene_biotype=protein_coding;gene_synonym=SCJ4.07;locus_tag=SCO0026
NC_003888.3	RefSeq	CDS	23316	23831	.	+	0	ID=cds23;Parent=gene23;Dbxref=Genbank:NP_624384.1,GeneID:1095459;Name=NP_624384.1;Note=SCJ4.07%2C possible hypothetical protein%2C len: 171 aa%3B Contains possible N-terminal signal sequence. Also contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCJ4.07;product=hypothetical protein;protein_id=NP_624384.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	23340	23372	.	+	.	ID=id16;Dbxref=GeneID:1095459;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCJ4.07
NC_003888.3	RefSeq	gene	23977	24345	.	-	.	ID=gene24;Dbxref=GeneID:1095460;Name=SCJ4.08c;gbkey=Gene;gene=SCJ4.08c;gene_biotype=protein_coding;gene_synonym=SCJ4.08c;locus_tag=SCO0027
NC_003888.3	RefSeq	CDS	23977	24345	.	-	0	ID=cds24;Parent=gene24;Dbxref=Genbank:NP_624385.1,GeneID:1095460;Name=NP_624385.1;Note=SCJ4.08c%2C doubtful CDS%2C function unknown%2C len: 122 aa;gbkey=CDS;gene=SCJ4.08c;product=hypothetical protein;protein_id=NP_624385.1;transl_table=11
NC_003888.3	RefSeq	gene	24378	24521	.	-	.	ID=gene25;Dbxref=GeneID:1095461;Name=SCJ4.09c;gbkey=Gene;gene=SCJ4.09c;gene_biotype=protein_coding;gene_synonym=SCJ4.09c;locus_tag=SCO0028
NC_003888.3	RefSeq	CDS	24378	24521	.	-	0	ID=cds25;Parent=gene25;Dbxref=Genbank:NP_624386.1,GeneID:1095461;Name=NP_624386.1;Note=SCJ4.09c%2C doubtful CDS%2C function unknown%2C len: 47 aa;gbkey=CDS;gene=SCJ4.09c;product=hypothetical protein;protein_id=NP_624386.1;transl_table=11
NC_003888.3	RefSeq	gene	24644	24943	.	+	.	ID=gene26;Dbxref=GeneID:1095462;Name=SCJ4.10;gbkey=Gene;gene=SCJ4.10;gene_biotype=protein_coding;gene_synonym=SCJ4.10;locus_tag=SCO0029
NC_003888.3	RefSeq	CDS	24644	24943	.	+	0	ID=cds26;Parent=gene26;Dbxref=Genbank:NP_624387.1,GeneID:1095462;Name=NP_624387.1;Note=SCJ4.10%2C unknown%2C len: 99 aa;gbkey=CDS;gene=SCJ4.10;product=hypothetical protein;protein_id=NP_624387.1;transl_table=11
NC_003888.3	RefSeq	gene	25251	25871	.	+	.	ID=gene27;Dbxref=GeneID:1095463;Name=SCJ4.11;gbkey=Gene;gene=SCJ4.11;gene_biotype=protein_coding;gene_synonym=SCJ4.11;locus_tag=SCO0030
NC_003888.3	RefSeq	CDS	25251	25871	.	+	0	ID=cds27;Parent=gene27;Dbxref=Genbank:NP_624388.1,GeneID:1095463;Name=NP_624388.1;Note=SCJ4.11%2C unknown%2C len: 206 aa%3B similar in its N-terminal region to the SCP1 plasmid borne TR:Q9ACQ7 (EMBL:AL590464) Streptomyces coelicolor hypothetical protein SCP1.261c%2C 167 aa%3B fasta scores: opt: 478 Z-score: 480.3 E(): 4e-19%3B 74.766%25 identity in 107 aa overlap;gbkey=CDS;gene=SCJ4.11;product=hypothetical protein;protein_id=NP_624388.1;transl_table=11
NC_003888.3	RefSeq	gene	25843	26385	.	-	.	ID=gene28;Dbxref=GeneID:1095464;Name=SCJ4.12c;gbkey=Gene;gene=SCJ4.12c;gene_biotype=protein_coding;gene_synonym=SCJ4.12c;locus_tag=SCO0031
NC_003888.3	RefSeq	CDS	25843	26385	.	-	0	ID=cds28;Parent=gene28;Dbxref=Genbank:NP_624389.1,GeneID:1095464;Name=NP_624389.1;Note=SCJ4.12c%2C unknown%2C len: 180 aa;gbkey=CDS;gene=SCJ4.12c;product=hypothetical protein;protein_id=NP_624389.1;transl_table=11
NC_003888.3	RefSeq	gene	26527	28773	.	-	.	ID=gene29;Dbxref=GeneID:1095466;Name=SCJ4.14c;gbkey=Gene;gene=SCJ4.14c;gene_biotype=protein_coding;gene_synonym=SCJ4.14c;locus_tag=SCO0033
NC_003888.3	RefSeq	CDS	26527	28773	.	-	0	ID=cds29;Parent=gene29;Dbxref=Genbank:NP_624391.1,GeneID:1095466;Name=NP_624391.1;Note=SCJ4.14c%2C possible  neuraminidase (sialidase)%2C len: 748 aa%3B similar to many%2C both prokaryote and eukaryote%2C egs. SW:NANH_MICVI sialidase precusor from Micromonospora viridifaciens (647 aa) fasta scores%3B opt: 274%2C z-score: 299.9%2C E(): 2.4e-09%2C (28.6%25 identity in 587 aa overlap) and TR:O35657 (EMBL:Y11412) G9 sialidase precusor from Mus musculus (Mouse) (409 aa) fasta scores%3B opt: 325%2C z-score: 358.5%2C E(): 1.3e-12%2C (26.6%25 identity in 425 aa overlap). Also similar to TR:Q9ZBW1 (EMBL:AL034443) neuraminidase from Streptomyces coelicolor (648 aa) fasta scores%3B opt: 479%2C z-score: 524.0%2C E(): 7.9e-22%2C (33.5%25 identity in 638 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCJ4.14c;product=neuraminidase;protein_id=NP_624391.1;transl_table=11
NC_003888.3	RefSeq	gene	29040	29519	.	+	.	ID=gene30;Dbxref=GeneID:1095467;Name=SCJ4.15;gbkey=Gene;gene=SCJ4.15;gene_biotype=protein_coding;gene_synonym=SCJ4.15;locus_tag=SCO0034
NC_003888.3	RefSeq	CDS	29040	29519	.	+	0	ID=cds30;Parent=gene30;Dbxref=Genbank:NP_624392.1,GeneID:1095467;Name=NP_624392.1;Note=SCJ4.15%2C unknown%2C len: 159 aa;gbkey=CDS;gene=SCJ4.15;product=hypothetical protein;protein_id=NP_624392.1;transl_table=11
NC_003888.3	RefSeq	gene	29605	30054	.	-	.	ID=gene31;Dbxref=GeneID:1095468;Name=SCJ4.16c;gbkey=Gene;gene=SCJ4.16c;gene_biotype=protein_coding;gene_synonym=SCJ4.16c;locus_tag=SCO0035
NC_003888.3	RefSeq	CDS	29605	30054	.	-	0	ID=cds31;Parent=gene31;Dbxref=Genbank:NP_624393.1,GeneID:1095468;Name=NP_624393.1;Note=SCJ4.16c%2C unknown%2C len: 149 aa;gbkey=CDS;gene=SCJ4.16c;product=hypothetical protein;protein_id=NP_624393.1;transl_table=11
NC_003888.3	RefSeq	gene	30116	30355	.	-	.	ID=gene32;Dbxref=GeneID:1095469;Name=SCJ4.17c;gbkey=Gene;gene=SCJ4.17c;gene_biotype=protein_coding;gene_synonym=SCJ4.17c;locus_tag=SCO0036
NC_003888.3	RefSeq	CDS	30116	30355	.	-	0	ID=cds32;Parent=gene32;Dbxref=Genbank:NP_624394.1,GeneID:1095469;Name=NP_624394.1;Note=SCJ4.17c%2C unknown%2C len: 79 aa%3B weak similarity to TR:Q48505 (EMBL:M63292%3B) beta-lactamase (fragment) from Lactococcus lactis subsp. lactis (87 aa) fasta scores%3B opt: 91%2C z-score: 133.7%2C E(): 4.4%2C (31.8%25 identity in 66 aa overlap).;gbkey=CDS;gene=SCJ4.17c;product=hypothetical protein;protein_id=NP_624394.1;transl_table=11
NC_003888.3	RefSeq	gene	30379	31131	.	-	.	ID=gene33;Dbxref=GeneID:1095470;Name=SCJ4.18c;gbkey=Gene;gene=SCJ4.18c;gene_biotype=protein_coding;gene_synonym=SCJ4.18c;locus_tag=SCO0037
NC_003888.3	RefSeq	CDS	30379	31131	.	-	0	ID=cds33;Parent=gene33;Dbxref=Genbank:NP_624395.1,GeneID:1095470;Name=NP_624395.1;Note=SCJ4.18c%2C possible sigma factor%2C len: 250 aa%3B similar to many proposed sigma factors e.g. TR:CAB44418 (EMBL:AL078610) sigma factor from Streptomyces coelicolor (223 aa) fasta scores%3B opt: 419%2C z-score: 506.3%2C E(): 7.7e-21%2C (44.3%25 identity in 183 aa overlap) and SW:SIGY_BACSU RNA polymerase sigma factor%2C SigY from Bacillus subtilis (178 aa) fasta scores%3B opt: 111%2C z-score: 142.5%2C E(): 1.4%2C (23.9%25 identity in 117 aa overlap). Note possible framshift from previous CDS as similar to all but the N-terminus of TR:CAB42013 (EMBL:AL049754) RNA polymerase sigma factor from Streptomyces coelicolor (294 aa) fasta scores%3B opt: 270%2C z-score: 327.8%2C E(): 6.7e-11%2C (26.9%25 identity in 238 aa overlap) while SCJ4.19c is similar to the N-terminus. Contains possible helix-turn-helix motif (+3.23 SD) 91-112 aa;gbkey=CDS;gene=SCJ4.18c;product=sigma factor;protein_id=NP_624395.1;transl_table=11
NC_003888.3	RefSeq	gene	31146	31274	.	-	.	ID=gene34;Dbxref=GeneID:1095471;Name=SCJ4.19c;gbkey=Gene;gene=SCJ4.19c;gene_biotype=protein_coding;gene_synonym=SCJ4.19c;locus_tag=SCO0038
NC_003888.3	RefSeq	CDS	31146	31274	.	-	0	ID=cds34;Parent=gene34;Dbxref=Genbank:NP_624396.1,GeneID:1095471;Name=NP_624396.1;Note=SCJ4.19c%2C partial CDS%2C possible sigma factor%2C len: 24 aa%3B similar to the N-terminus of TR:CAB42013 (EMBL:AL049754) RNA polymerase sigma factor from Streptomyces coelicolor (294 aa) fasta scores%3B opt: 105%2C z-score: 185.5%2C E(): 0.0056%2C (50.0%25 identity in 32 aa overlap) and may frameshift into the downstream CDS (SCJ4.18c) which is similar to the remainder.;gbkey=CDS;gene=SCJ4.19c;product=sigma factor;protein_id=NP_624396.1;transl_table=11
NC_003888.3	RefSeq	gene	31520	32137	.	+	.	ID=gene35;Dbxref=GeneID:1095472;Name=SCJ4.20;gbkey=Gene;gene=SCJ4.20;gene_biotype=protein_coding;gene_synonym=SCJ4.20;locus_tag=SCO0039
NC_003888.3	RefSeq	CDS	31520	32137	.	+	0	ID=cds35;Parent=gene35;Dbxref=Genbank:NP_624397.1,GeneID:1095472;Name=NP_624397.1;Note=SCJ4.20%2C unknown%2C len: 205 aa%3B similar to the N-terminal region of TR:O53411 (EMBL:AL021897) hypothetical protein from Mycobacterium tuberculosis (360 aa) fasta scores%3B opt: 165%2C z-score: 190.9%2C E(): 0.0028%2C (34.1%25 identity in 135 aa overlap).;gbkey=CDS;gene=SCJ4.20;product=hypothetical protein;protein_id=NP_624397.1;transl_table=11
NC_003888.3	RefSeq	gene	32134	33357	.	+	.	ID=gene36;Dbxref=GeneID:1095473;Name=SCJ4.21;gbkey=Gene;gene=SCJ4.21;gene_biotype=protein_coding;gene_synonym=SCJ4.21;locus_tag=SCO0040
NC_003888.3	RefSeq	CDS	32134	33357	.	+	0	ID=cds36;Parent=gene36;Dbxref=Genbank:NP_624398.1,GeneID:1095473;Name=NP_624398.1;Note=SCJ4.21%2C possible glycosyl transferase%2C len: 407 aa%3B similar to many e.g. TR:O86304 (EMBL:AJ223970) macrolide glycosyl transferase from Streptomyces ambofaciens (417 aa) fasta scores%3B opt: 615%2C z-score: 696.4%2C E(): 2e-31%2C (34.3%25 identity in 405 aa overlap). Contains Pfam match to entry PF00201 UDPGT%2C UDP-glucoronosyl and UDP-glucosyl transferases.;gbkey=CDS;gene=SCJ4.21;product=glycosyl transferase;protein_id=NP_624398.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	33013	33216	.	+	.	ID=id17;Dbxref=GeneID:1095473;Note=Pfam match to entry PF00201 UDPGT%2C UDP-glucoronosyl and UDP-glucosyl transferases%2C score 37.10%2C E-value 1.3e-09.;gbkey=misc_feature;gene=SCJ4.21
NC_003888.3	RefSeq	gene	33360	33845	.	+	.	ID=gene37;Dbxref=GeneID:1095474;Name=SCJ4.22;gbkey=Gene;gene=SCJ4.22;gene_biotype=protein_coding;gene_synonym=SCJ4.22;locus_tag=SCO0041
NC_003888.3	RefSeq	CDS	33360	33845	.	+	0	ID=cds37;Parent=gene37;Dbxref=Genbank:NP_624399.1,GeneID:1095474;Name=NP_624399.1;Note=SCJ4.22%2C possible integral membrane protein%2C len: 161 aa%3B contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCJ4.22;product=hypothetical protein;protein_id=NP_624399.1;transl_table=11
NC_003888.3	RefSeq	gene	33842	34777	.	+	.	ID=gene38;Dbxref=GeneID:1095475;Name=SCJ4.23;gbkey=Gene;gene=SCJ4.23;gene_biotype=protein_coding;gene_synonym=SCJ4.23;locus_tag=SCO0042
NC_003888.3	RefSeq	CDS	33842	34777	.	+	0	ID=cds38;Parent=gene38;Dbxref=Genbank:NP_624400.1,GeneID:1095475;Name=NP_624400.1;Note=SCJ4.23%2C unknown%2C len: 311 aa;gbkey=CDS;gene=SCJ4.23;product=hypothetical protein;protein_id=NP_624400.1;transl_table=11
NC_003888.3	RefSeq	gene	35179	35907	.	-	.	ID=gene39;Dbxref=GeneID:1095476;Name=SCJ4.24c;gbkey=Gene;gene=SCJ4.24c;gene_biotype=protein_coding;gene_synonym=SCJ4.24c;locus_tag=SCO0043
NC_003888.3	RefSeq	CDS	35179	35907	.	-	0	ID=cds39;Parent=gene39;Dbxref=Genbank:NP_624401.1,GeneID:1095476;Name=NP_624401.1;Note=SCJ4.24c%2C unknown%2C len: 242 aa%3B weakly similar to several hypothetical proteins eg. TR:O86850 (EMBL:AJ007731) from Streptomyces coelicolor (284 aa) fasta scores%3B opt: 167%2C z-score: 198.4%2C E(): 0.0011%2C (31.7%25 identity in 224 aa overlap).;gbkey=CDS;gene=SCJ4.24c;product=hypothetical protein;protein_id=NP_624401.1;transl_table=11
NC_003888.3	RefSeq	gene	36006	36674	.	-	.	ID=gene40;Dbxref=GeneID:1095477;Name=SCJ4.25c;gbkey=Gene;gene=SCJ4.25c;gene_biotype=protein_coding;gene_synonym=SCJ4.25c;locus_tag=SCO0044
NC_003888.3	RefSeq	CDS	36006	36674	.	-	0	ID=cds40;Parent=gene40;Dbxref=Genbank:NP_624402.1,GeneID:1095477;Name=NP_624402.1;Note=SCJ4.25c%2C probable oxidoreductase%2C len: 222 aa%3B similar to many e.g. SW:NOX_THETH NADH dehydrogenase from Thermus thermophilus (205 aa) fasta scores%3B opt: 169%2C z-score: 215.5%2C E(): 0.00012%2C (27.7%25 identity in 220 aa overlap). Contains Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family;gbkey=CDS;gene=SCJ4.25c;product=oxidoreductase;protein_id=NP_624402.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	36123	36671	.	-	.	ID=id18;Dbxref=GeneID:1095477;Note=Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family%2C score 37.00%2C E-value 4.2e-07;gbkey=misc_feature;gene=SCJ4.25c
NC_003888.3	RefSeq	gene	36689	36817	.	-	.	ID=gene41;Dbxref=GeneID:1095478;Name=SCJ4.26c;gbkey=Gene;gene=SCJ4.26c;gene_biotype=protein_coding;gene_synonym=SCJ4.26c;locus_tag=SCO0045
NC_003888.3	RefSeq	CDS	36689	36817	.	-	0	ID=cds41;Parent=gene41;Dbxref=Genbank:NP_624403.1,GeneID:1095478;Name=NP_624403.1;Note=SCJ4.26c%2C unknown%2C len: 42 aa;gbkey=CDS;gene=SCJ4.26c;product=hypothetical protein;protein_id=NP_624403.1;transl_table=11
NC_003888.3	RefSeq	gene	36816	37478	.	+	.	ID=gene42;Dbxref=GeneID:1095479;Name=SCJ4.27;gbkey=Gene;gene=SCJ4.27;gene_biotype=protein_coding;gene_synonym=SCJ4.27;locus_tag=SCO0046
NC_003888.3	RefSeq	CDS	36816	37478	.	+	0	ID=cds42;Parent=gene42;Dbxref=Genbank:NP_624404.1,GeneID:1095479;Name=NP_624404.1;gbkey=CDS;gene=SCJ4.27;product=hydrolase;protein_id=NP_624404.1;transl_table=11
NC_003888.3	RefSeq	gene	37614	38768	.	-	.	ID=gene43;Dbxref=GeneID:1095480;Name=SCJ4.28c;gbkey=Gene;gene=SCJ4.28c;gene_biotype=protein_coding;gene_synonym=SCJ4.28c;locus_tag=SCO0047
NC_003888.3	RefSeq	CDS	37614	38768	.	-	0	ID=cds43;Parent=gene43;Dbxref=Genbank:NP_624405.1,GeneID:1095480;Name=NP_624405.1;Note=SCJ4.28c%2C possible transcriptional regulator%2C len: 384 aa%3B C-terminal similar to many transcriptional regulator eg. SW:SLYA_ECOLI transcriptional regulator from Escherichia coli (146 aa) fasta scores%3B opt: 156%2C z-score: 184.9%2C E(): 0.0061%2C (24.6%25 identity in 122 aa overlap). Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SCJ4.28c;product=transcriptional regulator;protein_id=NP_624405.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	37641	37952	.	-	.	ID=id19;Dbxref=GeneID:1095480;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 48.90%2C E-value 1.1e-10;gbkey=misc_feature;gene=SCJ4.28c
NC_003888.3	RefSeq	gene	39107	39490	.	-	.	ID=gene44;Dbxref=GeneID:1095481;Name=SCJ4.29c;gbkey=Gene;gene=SCJ4.29c;gene_biotype=protein_coding;gene_synonym=SCJ4.29c;locus_tag=SCO0048
NC_003888.3	RefSeq	CDS	39107	39490	.	-	0	ID=cds44;Parent=gene44;Dbxref=Genbank:NP_624406.1,GeneID:1095481;Name=NP_624406.1;Note=SCJ4.29c%2C unknown%2C len: 127 aa;gbkey=CDS;gene=SCJ4.29c;product=hypothetical protein;protein_id=NP_624406.1;transl_table=11
NC_003888.3	RefSeq	gene	39489	39812	.	+	.	ID=gene45;Dbxref=GeneID:1095482;Name=SCJ4.30;gbkey=Gene;gene=SCJ4.30;gene_biotype=protein_coding;gene_synonym=SCJ4.30;locus_tag=SCO0049
NC_003888.3	RefSeq	CDS	39489	39812	.	+	0	ID=cds45;Parent=gene45;Dbxref=Genbank:NP_624407.1,GeneID:1095482;Name=NP_624407.1;Note=SCJ4.30%2C unknown%2C len: 107 aa;gbkey=CDS;gene=SCJ4.30;product=hypothetical protein;protein_id=NP_624407.1;transl_table=11
NC_003888.3	RefSeq	gene	39877	40212	.	+	.	ID=gene46;Dbxref=GeneID:1095483;Name=SCJ4.31;gbkey=Gene;gene=SCJ4.31;gene_biotype=protein_coding;gene_synonym=SCJ4.31;locus_tag=SCO0050
NC_003888.3	RefSeq	CDS	39877	40212	.	+	0	ID=cds46;Parent=gene46;Dbxref=Genbank:NP_624408.1,GeneID:1095483;Name=NP_624408.1;Note=SCJ4.31%2C hypothetical protein%2C len: 111 aa%3B region of similarity to many respiratory electron transport chain proteins eg. TR:O49078 (EMBL:AF037456) cytochrome B6-F complex iron-sulphur subunit from Fritillaria agrestis (230 aa) fasta scores%3B opt: 104%2C z-score: 143.7%2C E(): 1.2%2C (32.8%25 identity in 67 aa overlap).;gbkey=CDS;gene=SCJ4.31;product=hypothetical protein;protein_id=NP_624408.1;transl_table=11
NC_003888.3	RefSeq	gene	40223	40918	.	-	.	ID=gene47;Dbxref=GeneID:1095484;Name=SCJ4.32c;gbkey=Gene;gene=SCJ4.32c;gene_biotype=pseudogene;gene_synonym=SCJ4.32c,SCJ4.33c;locus_tag=SCO0051;pseudo=true
NC_003888.3	RefSeq	sequence_feature	40223	40918	.	-	.	ID=id20;Dbxref=GeneID:1095484;Note=SCJ4.32c%2C partial CDS%2C possible transposase%2C len: 59aa%3B similar to N-terminal region of many eg. TR:CAB38475 (EMBL:AL035636)  transposase (229 aa) fasta scores%3B opt: 249%2C z-score: 392.1%2C E(): 1.8e-14%2C (59.6%25 identity in 57 aa overlap).~SCJ4.33c%2C partial CDS%2C possible transposase%2C len: 146aa%3B similar to N-terminal region of many eg. TR:CAB38475 (EMBL:AL035636) transposase (229 aa) fasta scores%3B opt: 532%2C z-score: 652.6%2C E(): 5.5e-29%2C (55.6%25 identity in 144 aa overlap).%3B transposase;gbkey=misc_feature;gene=SCJ4.32c
NC_003888.3	RefSeq	gene	41354	42174	.	+	.	ID=gene48;Dbxref=GeneID:1095485;Name=SCJ4.34;gbkey=Gene;gene=SCJ4.34;gene_biotype=pseudogene;gene_synonym=SCJ4.34,SCJ4.35;locus_tag=SCO0053;pseudo=true
NC_003888.3	RefSeq	sequence_feature	41354	42174	.	+	.	ID=id21;Dbxref=GeneID:1095485;Note=SCJ4.34%2C partial CDS%2C possible transposase%2C len: 146 aa%3B similar to SW:YI22_BURCE insertion element hypothetical protein from Pseudomonas cepacia (147 aa) fasta scores%3B opt: 439%2C z-score: 578.9%2C E(): 7e-25%2C (57.6%25 identity in 118 aa overlap).~SCJ4.35%2C partial CDS%2C possible transposase%2C len: 124 aa%3B similar to SW:YI21_BURCE insertion element hypothetical protein from Pseudomonas cepacia (147 aa) fasta scores%3B opt: 527%2C z-score: 683.1%2C E(): 1.1e-30%2C (65.3%25 identity in 118 aa overlap).%3Btransposase;gbkey=misc_feature;gene=SCJ4.34
NC_003888.3	RefSeq	gene	42171	43682	.	-	.	ID=gene49;Dbxref=GeneID:1095486;Name=SCJ4.36c;gbkey=Gene;gene=SCJ4.36c;gene_biotype=protein_coding;gene_synonym=SCJ4.36c;locus_tag=SCO0055
NC_003888.3	RefSeq	CDS	42171	43682	.	-	0	ID=cds47;Parent=gene49;Dbxref=Genbank:NP_624409.1,GeneID:1095486;Name=NP_624409.1;Note=SCJ4.36c%2C possible membrane-associated oxidoreductase%2C len: 503aa%3B N-terminal region similar to TR:Q53931 (EMBL:X64420) HisD L-histidinol:NAD oxidoreductase from Streptomyces coelicolor (203 aa) fasta scores%3B opt: 345%2C z-score: 401.6%2C E(): 5.2e-15%2C (35.6%25 identity in 177 aa overlap). Also similar to TR:O88013 (EMBL:AL031107) hypothetical protein from Streptomyces coelicolor (527 aa) fasta scores%3B opt: 684%2C z-score: 783.6%2C E(): 0%2C (37.0%25 identity in 525 aa overlap);gbkey=CDS;gene=SCJ4.36c;product=membrane-associated oxidoreductase;protein_id=NP_624409.1;transl_table=11
NC_003888.3	RefSeq	gene	43768	43857	.	+	.	ID=gene50;Dbxref=GeneID:1095487;Name=SCJ4.37;gbkey=Gene;gene=SCJ4.37;gene_biotype=protein_coding;gene_synonym=SCJ4.37;locus_tag=SCO0056
NC_003888.3	RefSeq	CDS	43768	43857	.	+	0	ID=cds48;Parent=gene50;Dbxref=Genbank:NP_624410.1,GeneID:1095487;Name=NP_624410.1;Note=SCJ4.37%2C unknown%2C len: 29 aa;gbkey=CDS;gene=SCJ4.37;product=hypothetical protein;protein_id=NP_624410.1;transl_table=11
NC_003888.3	RefSeq	gene	43950	44090	.	+	.	ID=gene51;Dbxref=GeneID:1095488;Name=SCJ4.38;gbkey=Gene;gene=SCJ4.38;gene_biotype=protein_coding;gene_synonym=SCJ4.38;locus_tag=SCO0057
NC_003888.3	RefSeq	CDS	43950	44090	.	+	0	ID=cds49;Parent=gene51;Dbxref=Genbank:NP_624411.1,GeneID:1095488;Name=NP_624411.1;Note=SCJ4.38%2C unknown%2C len: 46 aa;gbkey=CDS;gene=SCJ4.38;product=hypothetical protein;protein_id=NP_624411.1;transl_table=11
NC_003888.3	RefSeq	gene	44253	44975	.	+	.	ID=gene52;Dbxref=GeneID:1095489;Name=SCJ4.39;gbkey=Gene;gene=SCJ4.39;gene_biotype=protein_coding;gene_synonym=SCJ4.39;locus_tag=SCO0058
NC_003888.3	RefSeq	CDS	44253	44975	.	+	0	ID=cds50;Parent=gene52;Dbxref=Genbank:NP_624412.1,GeneID:1095489;Name=NP_624412.1;Note=SCJ4.39%2C unknown%2C len: 240 aa;gbkey=CDS;gene=SCJ4.39;product=hypothetical protein;protein_id=NP_624412.1;transl_table=11
NC_003888.3	RefSeq	gene	45267	46073	.	+	.	ID=gene53;Dbxref=GeneID:1095490;Name=SCJ4.40;gbkey=Gene;gene=SCJ4.40;gene_biotype=protein_coding;gene_synonym=SCJ4.40;locus_tag=SCO0059
NC_003888.3	RefSeq	CDS	45267	46073	.	+	0	ID=cds51;Parent=gene53;Dbxref=Genbank:NP_624413.1,GeneID:1095490;Name=NP_624413.1;Note=SCJ4.40%2C possible zinc-binding oxidoreductase%2C len: 268 aa%3B similar to many both prokaryote and eukaryote egs. TR:O85702 (EMBL:AF072709) oxidoreductase from Streptomyces lividans 66 (313 aa) fasta scores%3B opt: 494%2C z-score: 509.6%2C E(): 5e-21%2C (41.3%25 identity in 240 aa overlap) and SW:QOR_CAVPO quinone oxidoreductase from Cavia porcellus (guinea pig) (329 aa) fasta scores%3B opt: 397%2C z-score: 411.5%2C E(): 1.5e-15%2C (32.8%25 identity in 244 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SCJ4.40;product=zinc-binding oxidoreductase;protein_id=NP_624413.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	45285	46058	.	+	.	ID=id22;Dbxref=GeneID:1095490;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score -75.50%2C E-value 1e-05;gbkey=misc_feature;gene=SCJ4.40
NC_003888.3	RefSeq	gene	46064	46201	.	+	.	ID=gene54;Dbxref=GeneID:1095491;Name=SCJ4.41;gbkey=Gene;gene=SCJ4.41;gene_biotype=protein_coding;gene_synonym=SCJ4.41;locus_tag=SCO0060
NC_003888.3	RefSeq	CDS	46064	46201	.	+	0	ID=cds52;Parent=gene54;Dbxref=Genbank:NP_624414.1,GeneID:1095491;Name=NP_624414.1;Note=SCJ4.41%2C unknown%2C len: 45 aa%3B predicted by GC Frameplot and amino acid usage.;gbkey=CDS;gene=SCJ4.41;product=hypothetical protein;protein_id=NP_624414.1;transl_table=11
NC_003888.3	RefSeq	gene	46430	47734	.	-	.	ID=gene55;Dbxref=GeneID:1095492;Name=SCJ4.42c;gbkey=Gene;gene=SCJ4.42c;gene_biotype=protein_coding;gene_synonym=SCJ4.42c;locus_tag=SCO0061
NC_003888.3	RefSeq	CDS	46430	47734	.	-	0	ID=cds53;Parent=gene55;Dbxref=Genbank:NP_624415.1,GeneID:1095492;Name=NP_624415.1;Note=SCJ4.42c%2C unknown%2C len: 434 aa%3B similar to SW:YDEG_SCHPO hypothetical protein from Schizosaccharomyces pombe (fission yeast) (509 aa) fasta scores%3B opt: 665%2C z-score: 791.0%2C E(): 0%2C (37.6%25 identity in 423 aa overlap) and to TR:Q9KEQ9 (EMBL:AP001509) Bacillus halodurans BH0790 protein%2C 454 aa%3B fasta scores: opt: 1262 Z-score: 1468.0 bits: 280.8 E(): 3.9e-74%3B 45.433%25 identity in 416 aa overlap;gbkey=CDS;gene=SCJ4.42c;product=hypothetical protein;protein_id=NP_624415.1;transl_table=11
NC_003888.3	RefSeq	gene	47789	48892	.	-	.	ID=gene56;Dbxref=GeneID:1095493;Name=SCJ4.43c;gbkey=Gene;gene=SCJ4.43c;gene_biotype=protein_coding;gene_synonym=SCJ4.43c;locus_tag=SCO0062
NC_003888.3	RefSeq	CDS	47789	48892	.	-	0	ID=cds54;Parent=gene56;Dbxref=Genbank:NP_624416.1,GeneID:1095493;Name=NP_624416.1;Note=SCJ4.43c%2C probable LacI family transcriptional regulator%2C len: 367 aa%3B similar to many transcriptional regulators e.g. SW:GALR_ECOLI galactose operon repressor (343 aa) fasta scores%3B opt: 549%2C z-score: 636.2%2C E(): 4.5e-28%2C (32.5%25 identity in 332 aa overlap). Contains Pfam matches to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family. Contains possible helix-turn-helix motif (+3.86 SD) 26-47.;gbkey=CDS;gene=SCJ4.43c;product=LacI family transcriptional regulator;protein_id=NP_624416.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	47942	48652	.	-	.	ID=id23;Dbxref=GeneID:1095493;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 89.10%2C E-value 9.2e-23;gbkey=misc_feature;gene=SCJ4.43c
NC_003888.3	RefSeq	sequence_feature	48743	48826	.	-	.	ID=id24;Dbxref=GeneID:1095493;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 30.90%2C E-value 3.3e-07;gbkey=misc_feature;gene=SCJ4.43c
NC_003888.3	RefSeq	gene	48889	49824	.	-	.	ID=gene57;Dbxref=GeneID:1095494;Name=SCJ4.44c;gbkey=Gene;gene=SCJ4.44c;gene_biotype=protein_coding;gene_synonym=SCJ4.44c;locus_tag=SCO0063
NC_003888.3	RefSeq	CDS	48889	49824	.	-	0	ID=cds55;Parent=gene57;Dbxref=Genbank:NP_624417.1,GeneID:1095494;Name=NP_624417.1;Note=SCJ4.44c%2C possible glucokinase%2C len: 311 aa%3B similar to many eg. SW:GLK_STRCO glucokinase from Streptomyces coelicolor (317 aa) fasta scores%3B opt: 175%2C z-score: 195.7%2C E(): 0.0015%2C (28.2%25 identity in 326 aa overlap). Contains Pfam match to entry PF00480 ROK%2C ROK family;gbkey=CDS;gene=SCJ4.44c;product=glucokinase;protein_id=NP_624417.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	49336	49467	.	-	.	ID=id25;Dbxref=GeneID:1095494;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 30.40%2C E-value 5.8e-08;gbkey=misc_feature;gene=SCJ4.44c
NC_003888.3	RefSeq	gene	49821	51539	.	-	.	ID=gene58;Dbxref=GeneID:1095495;Name=SCJ4.45c;gbkey=Gene;gene=SCJ4.45c;gene_biotype=protein_coding;gene_synonym=SCJ4.45c;locus_tag=SCO0064
NC_003888.3	RefSeq	CDS	49821	51539	.	-	0	ID=cds56;Parent=gene58;Dbxref=Genbank:NP_624418.1,GeneID:1095495;Name=NP_624418.1;Note=SCJ4.45c%2C unknown%2C len: 572 aa;gbkey=CDS;gene=SCJ4.45c;product=hypothetical protein;protein_id=NP_624418.1;transl_table=11
NC_003888.3	RefSeq	gene	51831	53144	.	+	.	ID=gene59;Dbxref=GeneID:1095496;Name=SCJ4.46;gbkey=Gene;gene=SCJ4.46;gene_biotype=protein_coding;gene_synonym=SCJ4.46;locus_tag=SCO0065
NC_003888.3	RefSeq	CDS	51831	53144	.	+	0	ID=cds57;Parent=gene59;Dbxref=Genbank:NP_624419.1,GeneID:1095496;Name=NP_624419.1;Note=SCJ4.46%2C possible extracellular binding protein%2C part of a possible binding protein dependent transport system%2C len: 437 aa%3B similar to many egs. TR:Q9Z492 (EMBL:AF043654) BxlE%2C extracellular binding protein from Streptomyces lividans (434 aa) fasta scores%3B opt: 256%2C z-score: 290.5%2C E(): 8.1e-09%2C (23.3%25 identity in 446 aa overlap) and SW:YC14_PYRHO hypothetical ABC transporter extracellular binding protein from Pyrococcus horikoshii OT3 (441 aa) fasta scores%3B opt: 348%2C z-score: 393.3%2C E(): 1.5e-14%2C (25.4%25 identity in 343 aa overlap). Contains Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site so may be anchored by lipid.;gbkey=CDS;gene=SCJ4.46;product=extracellular binding protein;protein_id=NP_624419.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	51903	51935	.	+	.	ID=id26;Dbxref=GeneID:1095496;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCJ4.46
NC_003888.3	RefSeq	gene	53141	54100	.	+	.	ID=gene60;Dbxref=GeneID:1095497;Name=SCJ4.47;gbkey=Gene;gene=SCJ4.47;gene_biotype=protein_coding;gene_synonym=SCJ4.47;locus_tag=SCO0066
NC_003888.3	RefSeq	CDS	53141	54100	.	+	0	ID=cds58;Parent=gene60;Dbxref=Genbank:NP_624420.1,GeneID:1095497;Name=NP_624420.1;Note=SCJ4.47%2C possible integral membrane permease%2C part of a possible binding protein dependent transport system%2C len: 319 aa%3B similar to many eg. SW:LACF_AGRRD lactose transport system permease from Agrobacterium radiobacter (298 aa) fasta scores%3B opt: 460%2C z-score: 522.1%2C E(): 1e-21%2C (30.5%25 identity in 272 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SCJ4.47;product=integral membrane permease;protein_id=NP_624420.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	53756	53989	.	+	.	ID=id27;Dbxref=GeneID:1095497;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 64.50%2C E-value 2.3e-15;gbkey=misc_feature;gene=SCJ4.47
NC_003888.3	RefSeq	sequence_feature	53759	53845	.	+	.	ID=id28;Dbxref=GeneID:1095497;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCJ4.47
NC_003888.3	RefSeq	gene	54097	54918	.	+	.	ID=gene61;Dbxref=GeneID:1095498;Name=SCJ4.48;gbkey=Gene;gene=SCJ4.48;gene_biotype=protein_coding;gene_synonym=SCJ4.48;locus_tag=SCO0067
NC_003888.3	RefSeq	CDS	54097	54918	.	+	0	ID=cds59;Parent=gene61;Dbxref=Genbank:NP_624421.1,GeneID:1095498;Name=NP_624421.1;Note=SCJ4.48%2C probable integral membrane permease%2C len: 273 aa%3B similar to many e.g. TR:Q9Z3R7 (EMBL:AF045609) inner membrane permease from the alpha-glucosides binding protein dependent transport system of Rhizobium (Sinorhizobium) meliloti (305 aa) fasta scores%3B opt: 393%2C z-score: 457.6%2C E(): 4e-18%2C (32.3%25 identity in 229 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCJ4.48;product=integral membrane permease;protein_id=NP_624421.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	54571	54807	.	+	.	ID=id29;Dbxref=GeneID:1095498;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 61.00%2C E-value 2.5e-14;gbkey=misc_feature;gene=SCJ4.48
NC_003888.3	RefSeq	gene	54968	56173	.	+	.	ID=gene62;Dbxref=GeneID:1095499;Name=SCJ4.49;gbkey=Gene;gene=SCJ4.49;gene_biotype=protein_coding;gene_synonym=SCJ4.49;locus_tag=SCO0068
NC_003888.3	RefSeq	CDS	54968	56173	.	+	0	ID=cds60;Parent=gene62;Dbxref=Genbank:NP_624422.1,GeneID:1095499;Name=NP_624422.1;Note=SCJ4.49%2C possible hydrolase (hypothetical protein)%2C len: 401aa%3B N-terminal region similar to that of TR:Q9Z4P9 (EMBL:AB024331) alpha-1%2C6-D-mannanase from Bacillus circulans (589 aa) fasta scores%3B opt: 218%2C z-score: 251.2%2C E(): 1.2e-06%2C (26.2%25 identity in 229 aa overlap);gbkey=CDS;gene=SCJ4.49;product=hydrolase;protein_id=NP_624422.1;transl_table=11
NC_003888.3	RefSeq	gene	56225	59383	.	+	.	ID=gene63;Dbxref=GeneID:1095500;Name=SCJ4.50;gbkey=Gene;gene=SCJ4.50;gene_biotype=protein_coding;gene_synonym=SCJ4.50;locus_tag=SCO0069
NC_003888.3	RefSeq	CDS	56225	59383	.	+	0	ID=cds61;Parent=gene63;Dbxref=Genbank:NP_624423.1,GeneID:1095500;Name=NP_624423.1;Note=SCJ4.50%2C unknown%2C len: 1052 aa;gbkey=CDS;gene=SCJ4.50;product=hypothetical protein;protein_id=NP_624423.1;transl_table=11
NC_003888.3	RefSeq	gene	59558	60241	.	+	.	ID=gene64;Dbxref=GeneID:1095501;Name=SCJ4.51;gbkey=Gene;gene=SCJ4.51;gene_biotype=protein_coding;gene_synonym=SCJ4.51;locus_tag=SCO0070
NC_003888.3	RefSeq	CDS	59558	60241	.	+	0	ID=cds62;Parent=gene64;Dbxref=Genbank:NP_624424.1,GeneID:1095501;Name=NP_624424.1;Note=SCJ4.51%2C unknown%2C possibly involved in sugar metabolism%2C len: 22 aa%3B similar over region to many hypothetical sugar metabolism proteins e.g. SW:VIPB_SALTI polysaccharide biosynthesis protein from Salmonella enterica (348 aa) fasta scores%3B opt: 220%2C z-score: 251.9%2C E(): 1.1e-06%2C (31.8%25 identity in 170 aa overlap). Note overlap with downstream gene.;gbkey=CDS;gene=SCJ4.51;product=hypothetical protein;protein_id=NP_624424.1;transl_table=11
NC_003888.3	RefSeq	gene	60069	60275	.	-	.	ID=gene65;Dbxref=GeneID:1095502;Name=SCJ4.52c;gbkey=Gene;gene=SCJ4.52c;gene_biotype=protein_coding;gene_synonym=SCJ4.52c;locus_tag=SCO0071
NC_003888.3	RefSeq	CDS	60069	60275	.	-	0	ID=cds63;Parent=gene65;Dbxref=Genbank:NP_624425.1,GeneID:1095502;Name=NP_624425.1;Note=SCJ4.52c%2C unknown%2C len: 68 aa%3B predicted by GC Frameplot and amino acid usage. Note overlap with downstream gene.;gbkey=CDS;gene=SCJ4.52c;product=hypothetical protein;protein_id=NP_624425.1;transl_table=11
NC_003888.3	RefSeq	gene	60740	64093	.	-	.	ID=gene66;Dbxref=GeneID:1095503;Name=SCJ11.01c;gbkey=Gene;gene=SCJ11.01c;gene_biotype=protein_coding;gene_synonym=SCJ11.01c,SCJ4.53c;locus_tag=SCO0072
NC_003888.3	RefSeq	CDS	60740	64093	.	-	0	ID=cds64;Parent=gene66;Dbxref=Genbank:NP_733489.1,GeneID:1095503;Name=NP_733489.1;Note=SCJ4.53c%2C partial CDS%2C unknown%2C len: >356 aa%3B similar to many of undefined function e.g. SW:WAPA_BACSU wall associated protein from Bacillus subtilis (2334 aa) fasta scores%3B opt: 322%2C z-score: 315.0%2C E(): 3.5e-10%2C (27.5%25 identity in 320 aa overlap).~SCJ11.01c%2C partial CDS%2C possible hypothetical protein%2C len: >793 aa;gbkey=CDS;gene=SCJ11.01c;product=hypothetical protein;protein_id=NP_733489.1;transl_table=11
NC_003888.3	RefSeq	gene	64605	64925	.	+	.	ID=gene67;Dbxref=GeneID:1095504;Name=SCJ11.02;gbkey=Gene;gene=SCJ11.02;gene_biotype=protein_coding;gene_synonym=SCJ11.02;locus_tag=SCO0073
NC_003888.3	RefSeq	CDS	64605	64925	.	+	0	ID=cds65;Parent=gene67;Dbxref=Genbank:NP_624426.1,GeneID:1095504;Name=NP_624426.1;Note=SCJ11.02%2C unknown%2C len: 106 aa;gbkey=CDS;gene=SCJ11.02;product=hypothetical protein;protein_id=NP_624426.1;transl_table=11
NC_003888.3	RefSeq	gene	64994	65092	.	+	.	ID=gene68;Dbxref=GeneID:1095505;Name=SCJ11.03;gbkey=Gene;gene=SCJ11.03;gene_biotype=protein_coding;gene_synonym=SCJ11.03;locus_tag=SCO0074
NC_003888.3	RefSeq	CDS	64994	65092	.	+	0	ID=cds66;Parent=gene68;Dbxref=Genbank:NP_624427.1,GeneID:1095505;Name=NP_624427.1;Note=SCJ11.03%2C unknown%2C len: 32 aa;gbkey=CDS;gene=SCJ11.03;product=hypothetical protein;protein_id=NP_624427.1;transl_table=11
NC_003888.3	RefSeq	gene	65092	65679	.	+	.	ID=gene69;Dbxref=GeneID:1095506;Name=SCJ11.04;gbkey=Gene;gene=SCJ11.04;gene_biotype=protein_coding;gene_synonym=SCJ11.04;locus_tag=SCO0075
NC_003888.3	RefSeq	CDS	65092	65679	.	+	0	ID=cds67;Parent=gene69;Dbxref=Genbank:NP_624428.1,GeneID:1095506;Name=NP_624428.1;Note=SCJ11.04%2C unknown%2C len: 195 aa%3B weakly similar to SW:KILB_STRLI KilB protein from Streptomyces lividans plasmid pIJ101 thought to be involved in plasmid transfer (147 aa) fasta scores%3B opt: 126%2C z-score: 152.9%2C E(): 0.37%2C (27.5%25 identity in 142 aa overlap). Contains probable coiled-coil region approx. 25-45aa. Contains TTA encode leucine%2C possible site for bldA regulation.;gbkey=CDS;gene=SCJ11.04;product=hypothetical protein;protein_id=NP_624428.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	65158	65160	.	+	.	ID=id30;Dbxref=GeneID:1095506;Note=Leucine encoding tta codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCJ11.04
NC_003888.3	RefSeq	gene	65627	66535	.	-	.	ID=gene70;Dbxref=GeneID:1095507;Name=SCJ11.05c;gbkey=Gene;gene=SCJ11.05c;gene_biotype=pseudogene;gene_synonym=SCJ11.05c,SCJ11.06c,SCJ11.07c;locus_tag=SCO0076;pseudo=true
NC_003888.3	RefSeq	sequence_feature	65627	66535	.	-	.	ID=id31;Dbxref=GeneID:1095507;Note=SCJ11.05c%2C partial CDS%2C possible transposase%2C len: 104 aa%3B appears to form the C-terminal region of a transposase with the remainder encoded by the two upstream CDSs%2C SCJ11.06c and SCJ11.07c. Similar to many egs. TR:P73414 (EMBL:D90906) proposed transposase from Synechocystis sp. strain PCC6803 (261 aa) fasta scores%3B opt: 246%2C z-score: 334.1%2C E(): 3e-11%2C (44.7%25 identity in 85 aa overlap) and TR:CAB38475 (EMBL:AL035636) proposed transposase from Streptomyces coelicolor (229 aa) fasta scores%3B opt: 234%2C z-score: 319.2%2C E(): 2e-10%2C (51.5%25 identity in 66 aa overlap).~SCJ11.06c%2C partial CDS%2C possible transposase%2C len: 104 aa%3B appears to form the middle region of a transposase with the remainder encoded by the downstream and upstream CDSs%2C SCJ11.05c and SCJ11.07c. Similar to many egs. TR:O67989 (EMBL:AF003948) proposed transposase from Rhodococcus opacus (242 aa) fasta scores%3B opt: 286%2C z-score: 379.4%2C E(): 9e-14%2C (49.4%25 identity in 89 aa overlap) and TR:CAB38475 (EMBL:AL035636) proposed transposase from Streptomyces coelicolor (229 aa) fasta scores%3B opt: 227%2C z-score: 303.9%2C E(): 1.4e-09%2C (41.6%25 identity in 89 aa overlap).~SCJ11.07c%2C partial CDS%2C possible transposase%2C len: 143 aa%3B appears to form the N-terminal region of a transposase with the remainder encoded by the two downstream CDSs%2C SCJ11.06c and SCJ11.05c. Similar to many eg. TR:Q44579 (EMBL:M98777) transposase from IS elements of Acetobacter xylinum (278 aa) fasta scores%3B opt: 258%2C z-score: 326.7%2C E(): 7.8e-11%2C (38.5%25 identity in 109 aa overlap). Also similar to TR:Q54404 (EMBL:Z11519) from Tn4811%2C in Streptomyces lividans 66 (320 aa) fasta scores%3B opt: 362%2C z-score: 453.5%2C E(): 6.7e-18%2C (50.5%25 identity in 103 aa overlap).%3Btransposase;gbkey=misc_feature;gene=SCJ11.05c
NC_003888.3	RefSeq	repeat_region	66404	66680	.	+	.	ID=id32;Note=Degenerate direct repeat unit%3B repeated at 6294-6566bp.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	66688	67911	.	-	.	ID=gene71;Dbxref=GeneID:1095508;Name=SCJ11.08c;gbkey=Gene;gene=SCJ11.08c;gene_biotype=protein_coding;gene_synonym=SCJ11.08c;locus_tag=SCO0079
NC_003888.3	RefSeq	CDS	66688	67911	.	-	0	ID=cds68;Parent=gene71;Dbxref=Genbank:NP_624429.1,GeneID:1095508;Name=NP_624429.1;Note=SCJ11.08c%2C possible integral membrane transport protein%2C len: 407 aa%3B similar to many e.g. TR:P72472 (EMBL:U63848) sensor protein homolog from Streptomyces lividans (410 aa) fasta scores%3B opt: 2533%2C z-score: 2742.9%2C E(): 0%2C (98.5%25 identity in 407 aa overlap) and TR:Q56147 (EMBL:U09991) chloramphenicol resistance protein from Streptomyces venezuelae (436 aa) fasta scores%3B opt: 559%2C z-score: 610.6%2C E(): 1.2e-26%2C (28.2%25 identity in 411 aa overlap). Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter.;gbkey=CDS;gene=SCJ11.08c;product=integral membrane transport protein;protein_id=NP_624429.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	66694	67842	.	-	.	ID=id33;Dbxref=GeneID:1095508;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -103.00%2C E-value 0.0034.;gbkey=misc_feature;gene=SCJ11.08c
NC_003888.3	RefSeq	repeat_region	68006	68278	.	+	.	ID=id34;Note=Degenerate direct repeat unit%3B repeated at 4692-4968bp.;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	68283	69767	.	+	.	ID=id35;Note=Possible disrupted transposon. Bounded by an inverted repeat (Score 51: 21/24 ( 87%25) matches%2C 0 gaps). Contains 2 partial CDSs (SCJ11.10c and SCJ11.11c) which are similar to many transposases and linked by a possible ribosomal frameshifting site but the upstream CDS lacks a start codon so is probably not translated. Also contains a hypothetical CDS (SCJ11.09).;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	68283	68306	.	+	.	ID=id36;Note=Part of inverted repeat bounding possible disrupted insertion element.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	68372	68887	.	+	.	ID=gene72;Dbxref=GeneID:1095509;Name=SCJ11.09;gbkey=Gene;gene=SCJ11.09;gene_biotype=protein_coding;gene_synonym=SCJ11.09;locus_tag=SCO0080
NC_003888.3	RefSeq	CDS	68372	68887	.	+	0	ID=cds69;Parent=gene72;Dbxref=Genbank:NP_624430.1,GeneID:1095509;Name=NP_624430.1;Note=SCJ11.09%2C unknown%2C len: 171 aa;gbkey=CDS;gene=SCJ11.09;product=hypothetical protein;protein_id=NP_624430.1;transl_table=11
NC_003888.3	RefSeq	gene	68914	69647	.	-	.	ID=gene73;Dbxref=GeneID:1095510;Name=SCJ11.10c;gbkey=Gene;gene=SCJ11.10c;gene_biotype=pseudogene;gene_synonym=SCJ11.10c,SCJ11.11c;locus_tag=SCO0081;pseudo=true
NC_003888.3	RefSeq	repeat_region	68914	69647	.	+	.	ID=id37;Note=Inverted and repeated degenerately at 20998-21806bp.;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	68914	69647	.	-	.	ID=id38;Dbxref=GeneID:1095510;Note=SCJ11.10c%2C partial CDS%2C possible transposon transposase%2C len: 165aa%3B similar to many egs. TR:O69847 (EMBL:AL023702) insertion element IS1647 transposase from Streptomyces coelicolor (150 aa) fasta scores%3B opt: 868%2C z-score: 1024.9%2C E(): 0%2C (81.8%25 identity in 148 aa overlap) and SW:YI21_BURCE insertion element IS402 hypothetical protein from Pseudomonas cepacia (211 aa) fasta scores%3B opt: 472%2C z-score: 561.6%2C E(): 6.4e-24%2C (46.7%25 identity in 167 aa overlap).~SCJ11.11c%2C partial CDS%2C possible transposon transposase%2C len: 94aa%3B similar to many egs. TR:O69846 (EMBL:AL023702) insertion element IS1647 transposase from Streptomyces coelicolor (119 aa) fasta scores%3B opt: 460%2C z-score: 639.1%2C E(): 3.1e-28%2C (77.3%25 identity in 88 aa overlap) and SW:YI22_BURCE insertion element IS402 hypothetical protein from Pseudomonas cepacia (147 aa) fasta scores%3B opt: 202%2C z-score: 287.7%2C E(): 1.1e-08%2C (39.8%25 identity in 88 aa overlap)%3Binsertion element transposase;gbkey=misc_feature;gene=SCJ11.10c
NC_003888.3	RefSeq	sequence_feature	69370	69376	.	-	.	ID=id39;Dbxref=GeneID:1095510;Note=possible ribosomal frameshifting site;gbkey=misc_feature;gene=SCJ11.10c
NC_003888.3	RefSeq	repeat_region	69744	69767	.	+	.	ID=id40;Note=Part of inverted repeat bounding possible disrupted insertion element.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	69799	70647	.	+	.	ID=gene74;Dbxref=GeneID:1095511;Name=SCJ11.12;gbkey=Gene;gene=SCJ11.12;gene_biotype=protein_coding;gene_synonym=SCJ11.12;locus_tag=SCO0083
NC_003888.3	RefSeq	CDS	69799	70647	.	+	0	ID=cds70;Parent=gene74;Dbxref=Genbank:NP_624431.1,GeneID:1095511;Name=NP_624431.1;Note=SCJ11.12%2C possible transposase%2C len: 282aa%3B N-terminal similar to SW:YI22_BURCE (147 aa) fasta scores%3B opt: 431%2C z-score: 529.9%2C E(): 3.7e-22%2C (54.6%25 identity in 119 aa overlap)%2C C-terminal similar to SW:YI21_BURCE (211 aa) fasta scores%3B opt: 700%2C z-score: 852.1%2C E(): 0%2C (61.4%25 identity in 166 aa overlap). SW:YI22_BURCE and SW:YI21_BURCE encode insertion element IS402 hypothetical protein from Pseudomonas cepacia. C-terminal also similar to TR:O69847 (EMBL:AL023702) insertion element IS1647 transposase from Streptomyces coelicolor (150 aa) fasta scores%3B opt: 440%2C z-score: 540.6%2C E(): 9.4e-23%2C (44.2%25 identity in 147 aa overlap).;gbkey=CDS;gene=SCJ11.12;product=transposase;protein_id=NP_624431.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	69799	70647	.	+	.	ID=id41;Dbxref=GeneID:1095511;Note=Inverted and repeated degenerately at 31881-32405bp.;gbkey=repeat_region;gene=SCJ11.12
NC_003888.3	RefSeq	gene	70777	71235	.	+	.	ID=gene75;Dbxref=GeneID:1095512;Name=SCJ11.13;gbkey=Gene;gene=SCJ11.13;gene_biotype=protein_coding;gene_synonym=SCJ11.13;locus_tag=SCO0084
NC_003888.3	RefSeq	CDS	70777	71235	.	+	0	ID=cds71;Parent=gene75;Dbxref=Genbank:NP_624432.1,GeneID:1095512;Name=NP_624432.1;Note=SCJ11.13%2C hypothetical protein%2C len: 152 aa%3B similar to TR:Q9S1Q3 (EMBL:AL109972) Streptomyces coelicolor hypothetical protein SCJ9A.17%2C 175 aa%3B fasta scores: opt: 683 Z-score: 803.5 E(): 4e-37%3B 68.421%25 identity in 152 aa overlap;gbkey=CDS;gene=SCJ11.13;product=hypothetical protein;protein_id=NP_624432.1;transl_table=11
NC_003888.3	RefSeq	gene	71648	72139	.	-	.	ID=gene76;Dbxref=GeneID:1095513;Name=SCJ11.14c;gbkey=Gene;gene=SCJ11.14c;gene_biotype=protein_coding;gene_synonym=SCJ11.14c;locus_tag=SCO0085
NC_003888.3	RefSeq	CDS	71648	72139	.	-	0	ID=cds72;Parent=gene76;Dbxref=Genbank:NP_624433.1,GeneID:1095513;Name=NP_624433.1;Note=SCJ11.14c%2C unknown%2C len: 163 aa%3B weak similarity to a region from many proposed DNA ligases eg. TR:CAB45581 (EMBL:AL079355) DNA ligase from Streptomyces coelicolor (355 aa) fasta scores%3B opt: 182%2C z-score: 228.5%2C E(): 2.3e-05%2C (32.6%25 identity in 132 aa overlap).;gbkey=CDS;gene=SCJ11.14c;product=hypothetical protein;protein_id=NP_624433.1;transl_table=11
NC_003888.3	RefSeq	gene	72159	73097	.	-	.	ID=gene77;Dbxref=GeneID:1095514;Name=SCJ11.15c;gbkey=Gene;gene=SCJ11.15c;gene_biotype=protein_coding;gene_synonym=SCJ11.15c;locus_tag=SCO0086
NC_003888.3	RefSeq	CDS	72159	73097	.	-	0	ID=cds73;Parent=gene77;Dbxref=Genbank:NP_624434.1,GeneID:1095514;Name=NP_624434.1;Note=SCJ11.15c%2C possible ribosylglycohydrolase ( hypothetical protein)%2C len: 312 aa%3B similar to SW:DRAG_RHORU (EMBL:X16187) ADP-ribosylglycohydrolase DraG from Rhodospirillum rubrum (294 aa) fasta scores%3B opt: 267%2C z-score: 299.5%2C E(): 2.5e-09%2C (31.1%25 identity in 283 aa overlap);gbkey=CDS;gene=SCJ11.15c;product=ribosylglycohydrolase;protein_id=NP_624434.1;transl_table=11
NC_003888.3	RefSeq	gene	73784	74833	.	-	.	ID=gene78;Dbxref=GeneID:1095515;Name=SCJ11.16c;gbkey=Gene;gene=SCJ11.16c;gene_biotype=protein_coding;gene_synonym=SCJ11.16c;locus_tag=SCO0087
NC_003888.3	RefSeq	CDS	73784	74833	.	-	0	ID=cds74;Parent=gene78;Dbxref=Genbank:NP_624435.1,GeneID:1095515;Name=NP_624435.1;Note=SCJ11.16c%2C hypothetical protein%2C len: 349 aa%3B similar to TR:P97061 (EMBL:Z81324) hypothetical protein downstream of a beta-lactam regulatory protein in Streptomyces clavuligerus (338 aa) fasta scores%3B opt: 548%2C z-score: 613.6%2C E(): 8.1e-27%2C (40.6%25 identity in 330 aa overlap);gbkey=CDS;gene=SCJ11.16c;product=hypothetical protein;protein_id=NP_624435.1;transl_table=11
NC_003888.3	RefSeq	gene	74917	75876	.	-	.	ID=gene79;Dbxref=GeneID:1095516;Name=SCJ11.17c;gbkey=Gene;gene=SCJ11.17c;gene_biotype=protein_coding;gene_synonym=SCJ11.17c;locus_tag=SCO0088
NC_003888.3	RefSeq	CDS	74917	75876	.	-	0	ID=cds75;Parent=gene79;Dbxref=Genbank:NP_624436.1,GeneID:1095516;Name=NP_624436.1;Note=SCJ11.17c%2C possible  beta-lactamase%2C len: 319 aa%3B some similarity to many e.g. SW:BLAB_STRCI partially defined beta-lactamase regulatory protein from Streptomyces cacaoi (312 aa) fasta scores%3B opt: 196%2C z-score: 231.8%2C E(): 1.5e-05%2C (28.4%25 identity in 278 aa overlap) and SW:BLAC_BACLI beta-lactamase from Bacillus licheniformis (307 aa) fasta scores%3B opt: 123%2C z-score: 148.2%2C E(): 0.68%2C (24.3%25 identity in 267 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCJ11.17c;product=beta-lactamase;protein_id=NP_624436.1;transl_table=11
NC_003888.3	RefSeq	gene	75856	76893	.	+	.	ID=gene80;Dbxref=GeneID:1095517;Name=SCJ11.18;gbkey=Gene;gene=SCJ11.18;gene_biotype=protein_coding;gene_synonym=SCJ11.18;locus_tag=SCO0089
NC_003888.3	RefSeq	CDS	75856	76893	.	+	0	ID=cds76;Parent=gene80;Dbxref=Genbank:NP_624437.1,GeneID:1095517;Name=NP_624437.1;Note=SCJ11.18%2C probable LysR-family transcriptional regulator%2C len: 345 aa%3B similar to many e.g. SW:ALSR_BACSU ALS operon regulator from Bacillus subtilis (302 aa) fasta scores%3B opt: 507%2C z-score: 564.5%2C E(): 4.4e-24%2C (31.0%25 identity in 290 aa overlap). Note possible alternative start codons downstream. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and Prosite match to PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=CDS;gene=SCJ11.18;product=transcriptional regulator;protein_id=NP_624437.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	75916	76344	.	+	.	ID=id42;Dbxref=GeneID:1095517;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 165.40%2C E-value 9.3e-46;gbkey=misc_feature;gene=SCJ11.18
NC_003888.3	RefSeq	sequence_feature	75958	76050	.	+	.	ID=id43;Dbxref=GeneID:1095517;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCJ11.18
NC_003888.3	RefSeq	gene	76895	77314	.	-	.	ID=gene81;Dbxref=GeneID:1095518;Name=SCJ11.19c;gbkey=Gene;gene=SCJ11.19c;gene_biotype=protein_coding;gene_synonym=SCJ11.19c;locus_tag=SCO0090
NC_003888.3	RefSeq	CDS	76895	77314	.	-	0	ID=cds77;Parent=gene81;Dbxref=Genbank:NP_624438.1,GeneID:1095518;Name=NP_624438.1;Note=SCJ11.19c%2C partial CDS%2C possible transposase%2C len: 140 aa%3B similar to SW:IS12_STRAL IS112 28%2C4 kD protein from Streptomyces albus (256 aa) fasta scores%3B opt: 349%2C z-score: 447.9%2C E(): 1.4e-17%2C (53.9%25 identity in 128 aa overlap).;end_range=77314,.;gbkey=CDS;gene=SCJ11.19c;partial=true;product=transposase;protein_id=NP_624438.1;start_range=.,76895;transl_table=11
NC_003888.3	RefSeq	sequence_feature	77202	78271	.	+	.	ID=id44;Note=Insertion element IS1652.;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	77202	77244	.	+	.	ID=id45;Note=Part of inverted repeat bounding insertion element IS1652.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	77315	78271	.	+	.	ID=gene82;Dbxref=GeneID:1095519;Name=SCJ11.20;gbkey=Gene;gene=SCJ11.20;gene_biotype=protein_coding;gene_synonym=SCJ11.20;locus_tag=SCO0091
NC_003888.3	RefSeq	CDS	77315	78271	.	+	0	ID=cds78;Parent=gene82;Dbxref=Genbank:NP_624439.1,GeneID:1095519;Name=NP_624439.1;Note=SCJ11.20%2C probable insertion element IS1652 transposase%2C len: 318 aa%3B similar to many e.g. TR:O86758 (EMBL:AL031035) transposase from Streptomyces coelicolor (318 aa) fasta scores%3B opt: 2217%2C z-score: 2566.4%2C E(): 0%2C (99.7%25 identity in 318 aa overlap).;gbkey=CDS;gene=SCJ11.20;product=IS1652 transposase;protein_id=NP_624439.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	78229	78271	.	+	.	ID=id46;Dbxref=GeneID:1095519;Note=Part of inverted repeat bounding insertion element IS1652.;gbkey=repeat_region;gene=SCJ11.20
NC_003888.3	RefSeq	gene	78489	78815	.	-	.	ID=gene83;Dbxref=GeneID:1095520;Name=SCJ11.21c;gbkey=Gene;gene=SCJ11.21c;gene_biotype=pseudogene;gene_synonym=SCJ11.21c,SCJ11.22c,SCJ11.23c;locus_tag=SCO0092;pseudo=true
NC_003888.3	RefSeq	sequence_feature	78489	78815	.	-	.	ID=id47;Dbxref=GeneID:1095520;Note=SCJ11.21c%2C partial CDS%2C possible transposase%2C associated with the two upstream CDSs%2C len: 42aa%3B similar to a region of SW:IS12_STRAL insertion element IS112 28.4kD protein from Streptomyces albus (256 aa) fasta scores%3B opt: 239%2C z-score: 404.1%2C E(): 3.8e-15%2C (88.1%25 identity in 42 aa overlap).~SCJ11.22c%2C partial CDS%2C possible transposase%2C associated with upstream and downstream CDSs%2C len: 42aa%3B similar to a region of SW:IS12_STRAL insertion element IS112 28.4kD protein from Streptomyces albus (256 aa) fasta scores%3B opt: 191%2C z-score: 306.6%2C E(): 1e-09%2C (77.5%25 identity in 40 aa overlap).~SCJ11.23c%2C partial CDS%2C possible transposase%2C associated with the two downstream CDSs%2C lacks start codon%2C len: 35aa%3B similar to a region of SW:IS12_STRAL insertion element IS112 28.4kD protein from Streptomyces albus (256 aa) fasta scores%3B opt: 163%2C z-score: 274.2%2C E(): 6.5e-08%2C (69.4%25 identity in 36 aa overlap).%3Btransposase;gbkey=misc_feature;gene=SCJ11.21c
NC_003888.3	RefSeq	sequence_feature	78709	78714	.	-	.	ID=id48;Dbxref=GeneID:1095520;Note=Possible site for ribosomal frameshifting.;gbkey=misc_feature;gene=SCJ11.21c
NC_003888.3	RefSeq	sequence_feature	78830	80793	.	+	.	ID=id49;Note=Noncomposite transposon (awaiting designation).;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	78830	78875	.	+	.	ID=id50;Note=Inverted repeat bounding noncomposite transposon.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	78983	79702	.	-	.	ID=gene84;Dbxref=GeneID:1095521;Name=SCJ11.24c;gbkey=Gene;gene=SCJ11.24c;gene_biotype=protein_coding;gene_synonym=SCJ11.24c;locus_tag=SCO0095
NC_003888.3	RefSeq	CDS	78983	79702	.	-	0	ID=cds79;Parent=gene84;Dbxref=Genbank:NP_624440.1,GeneID:1095521;Name=NP_624440.1;Note=SCJ11.24c%2C hypothetical protein%2C part of noncomposite transposon%2C len: 239 aa%3B weakly similar to SW:YAFD_ECOLI hypothetical protein from Escherichia coli (259 aa) fasta scores%3B opt: 112%2C z-score: 130.4%2C E(): 6.7%2C (25.0%25 identity in 208 aa overlap).;gbkey=CDS;gene=SCJ11.24c;product=hypothetical protein;protein_id=NP_624440.1;transl_table=11
NC_003888.3	RefSeq	gene	79839	80690	.	-	.	ID=gene85;Dbxref=GeneID:1095522;Name=SCJ11.25c;gbkey=Gene;gene=SCJ11.25c;gene_biotype=protein_coding;gene_synonym=SCJ11.25c;locus_tag=SCO0096
NC_003888.3	RefSeq	CDS	79839	80690	.	-	0	ID=cds80;Parent=gene85;Dbxref=Genbank:NP_624441.1,GeneID:1095522;Name=NP_624441.1;Note=SCJ11.25c%2C possible noncomposite transposon transposase%2C len: 283 aa%3B similar to many e.g. TR:O86758 (EMBL:AL031035) proposed transposase from Streptomyces coelicolor (318 aa) fasta scores%3B opt: 275%2C z-score: 330.3%2C E(): 4.9e-11%2C (32.7%25 identity in 278 aa overlap).;gbkey=CDS;gene=SCJ11.25c;product=noncomposite transposon transposase;protein_id=NP_624441.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	80748	80793	.	+	.	ID=id51;Note=Inverted repeat bounding noncomposite transposon.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	80845	81165	.	-	.	ID=gene86;Dbxref=GeneID:1095523;Name=SCJ11.26c;gbkey=Gene;gene=SCJ11.26c;gene_biotype=protein_coding;gene_synonym=SCJ11.26c;locus_tag=SCO0097
NC_003888.3	RefSeq	CDS	80845	81165	.	-	0	ID=cds81;Parent=gene86;Dbxref=Genbank:NP_624442.1,GeneID:1095523;Name=NP_624442.1;Note=SCJ11.26c%2C possible integral membrane protein%2C len: 106 aa%3B contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCJ11.26c;product=hypothetical protein;protein_id=NP_624442.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	81565	82665	.	-	.	ID=id52;Note=Insertion element IS1653. Previously sequenced as EMBL:AB024596 Streptomyces coelicolor insertion sequence DNA.;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	81565	81576	.	+	.	ID=id53;Note=Parted of the inverted repeat which bounds insertion element IS1653.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	81602	82441	.	-	.	ID=gene87;Dbxref=GeneID:1095524;Name=SCJ11.27c;gbkey=Gene;gene=SCJ11.27c;gene_biotype=protein_coding;gene_synonym=SCJ11.27c;locus_tag=SCO0098
NC_003888.3	RefSeq	CDS	81602	82441	.	-	0	ID=cds82;Parent=gene87;Dbxref=Genbank:NP_624443.1,GeneID:1095524;Name=NP_624443.1;Note=SCJ11.27c%2C possible transposase%2C len: 279 aa%3B previously sequenced therefore identical to TR:Q9Z9H3 (EMBL:AB024596)  transposase from Streptomyces coelicolor (279 aa) fasta scores%3B opt: 1839%2C z-score: 2190.6%2C E(): 0%2C (99.6%25 identity in 279 aa overlap). Also similar to many others eg. TR:Q48339 (EMBL:M80805) from IS1031 of Acetobacter xylinum (278 aa) fasta scores%3B opt: 611%2C z-score: 732.8%2C E(): 0%2C (38.9%25 identity in 262 aa overlap).;gbkey=CDS;gene=SCJ11.27c;product=transposase;protein_id=NP_624443.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	82656	82665	.	-	.	ID=id54;Note=Part of the inverted repeat which bounds the insertion element IS1653.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	82710	83518	.	+	.	ID=gene88;Dbxref=GeneID:1095525;Name=SCJ11.28;gbkey=Gene;gene=SCJ11.28;gene_biotype=pseudogene;gene_synonym=SCJ11.28,SCJ11.29;locus_tag=SCO0099;pseudo=true
NC_003888.3	RefSeq	sequence_feature	82710	83518	.	+	.	ID=id55;Dbxref=GeneID:1095525;Note=SCJ11.28%2C partial CDS%2C possible transposase%2C len: 116aa%3B similar to many egs. TR:O69846 (EMBL:AL023702) insertion element IS1647 transposase from Streptomyces coelicolor (119 aa) fasta scores%3B opt: 623%2C z-score: 791.1%2C E(): 0%2C (77.4%25 identity in 115 aa overlap) and SW:YI22_BURCE insertion element IS402 hypothetical protein (147 aa) fasta scores%3B opt: 272%2C z-score: 352.9%2C E(): 2.7e-12%2C (39.7%25 identity in 116 aa overlap).~SCJ11.29%2C partial CDS%2C possible transposase%2C len: 153aa%3B similar to many egs. TR:O69847 (EMBL:AL023702) insertion element IS1647 transposase (150 aa) fasta scores%3B opt: 810%2C z-score: 999.4%2C E(): 0%2C (76.9%25 identity in 147 aa overlap) and SW:YI21_BURCE insertion element IS402 hypothetical protein from Pseudomonas cepacia (211 aa) fasta scores%3B opt: 434%2C z-score: 539.8%2C E(): 1e-22%2C (45.1%25 identity in 153 aa overlap). Contains tta leucine codon%2C possible target for bldA regulation.%3Btransposase;gbkey=misc_feature;gene=SCJ11.28
NC_003888.3	RefSeq	repeat_region	82710	83518	.	-	.	ID=id56;Note=Inverted and repeated degenerately at 7202-7935bp.;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	83047	83053	.	+	.	ID=id57;Dbxref=GeneID:1095525;Note=Possible site for ribosomal frameshifting.;gbkey=misc_feature;gene=SCJ11.28
NC_003888.3	RefSeq	sequence_feature	83189	83191	.	+	.	ID=id58;Dbxref=GeneID:1095525;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCJ11.28
NC_003888.3	RefSeq	gene	83516	83992	.	-	.	ID=gene89;Dbxref=GeneID:1095526;Name=SCJ11.30c;gbkey=Gene;gene=SCJ11.30c;gene_biotype=protein_coding;gene_synonym=SCJ11.30c;locus_tag=SCO0101
NC_003888.3	RefSeq	CDS	83516	83992	.	-	0	ID=cds83;Parent=gene89;Dbxref=Genbank:NP_624444.2,GeneID:1095526;Name=NP_624444.2;Note=SCJ11.30c%2C unknown%2C len: 247 aa%3B similar to SW:YBFG_HAEIN hypothetical protein from Haemophilus influenzae (228 aa) fasta scores%3B opt: 374%2C z-score: 437.3%2C E(): 5.3e-17%2C (32.8%25 identity in 195 aa overlap). Contains TTA leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SCJ11.30c;product=hypothetical protein;protein_id=NP_624444.2;transl_table=11
NC_003888.3	RefSeq	sequence_feature	83735	83737	.	-	.	ID=id59;Dbxref=GeneID:1095526;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCJ11.30c
NC_003888.3	RefSeq	gene	84893	85339	.	+	.	ID=gene90;Dbxref=GeneID:1095527;Name=SCJ11.31;gbkey=Gene;gene=SCJ11.31;gene_biotype=protein_coding;gene_synonym=SCJ11.31;locus_tag=SCO0102
NC_003888.3	RefSeq	CDS	84893	85339	.	+	0	ID=cds84;Parent=gene90;Dbxref=Genbank:NP_624445.1,GeneID:1095527;Name=NP_624445.1;Note=SCJ11.31%2C unknown%2C len: 148 aa;gbkey=CDS;gene=SCJ11.31;product=hypothetical protein;protein_id=NP_624445.1;transl_table=11
NC_003888.3	RefSeq	gene	85336	86643	.	+	.	ID=gene91;Dbxref=GeneID:1095528;Name=SCJ11.32;gbkey=Gene;gene=SCJ11.32;gene_biotype=protein_coding;gene_synonym=SCJ11.32;locus_tag=SCO0103
NC_003888.3	RefSeq	CDS	85336	86643	.	+	0	ID=cds85;Parent=gene91;Dbxref=Genbank:NP_624446.1,GeneID:1095528;Name=NP_624446.1;Note=SCJ11.32%2C probable flavohemoprotein%2C len: 435aa%3B C-terminal region similar to many with reductase and dioxygenase activities%2C typical of flavohemoproteins e.g. TR:Q9ZI75 (EMBL:AF039533) naphthalene dioxygenase reductase from Pseudomonas stutzeri (328 aa) fasta scores%3B opt: 369%2C z-score: 419.0%2C E(): 5.6e-16%2C (28.6%25 identity in 241 aa overlap). Also typical of flavohemoprotein%2C C-terminal region contains Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain and N-terminal region contains Pfam match to entry PF00042 globin%2C Globin.;gbkey=CDS;gene=SCJ11.32;product=flavohemoprotein;protein_id=NP_624446.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	85462	85869	.	+	.	ID=id60;Dbxref=GeneID:1095528;Note=Pfam match to entry PF00042 globin%2C Globin%2C score 42.10%2C E-value 1.3e-08;gbkey=misc_feature;gene=SCJ11.32
NC_003888.3	RefSeq	sequence_feature	86200	86529	.	+	.	ID=id61;Dbxref=GeneID:1095528;Note=Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain%2C score 59.40%2C E-value 7.7e-14;gbkey=misc_feature;gene=SCJ11.32
NC_003888.3	RefSeq	gene	86640	87311	.	+	.	ID=gene92;Dbxref=GeneID:1095529;Name=SCJ11.33;gbkey=Gene;gene=SCJ11.33;gene_biotype=protein_coding;gene_synonym=SCJ11.33;locus_tag=SCO0104
NC_003888.3	RefSeq	CDS	86640	87311	.	+	0	ID=cds86;Parent=gene92;Dbxref=Genbank:NP_624447.1,GeneID:1095529;Name=NP_624447.1;Note=SCJ11.33%2C possible hydrolase%2C len: 223aa%3B similar to TR:O54126 (EMBL:AL021529) NTP pyrophosphohydrolase from Streptomyces coelicolor (359 aa) fasta scores%3B opt: 223%2C z-score: 267.6%2C E(): 1.5e-07%2C (29.4%25 identity in 194 aa overlap).;gbkey=CDS;gene=SCJ11.33;product=hydrolase;protein_id=NP_624447.1;transl_table=11
NC_003888.3	RefSeq	gene	87907	88632	.	-	.	ID=gene93;Dbxref=GeneID:1095530;Name=SCJ11.34c;gbkey=Gene;gene=SCJ11.34c;gene_biotype=protein_coding;gene_synonym=SCJ11.34c,xlnC;locus_tag=SCO0105
NC_003888.3	RefSeq	CDS	87907	88632	.	-	0	ID=cds87;Parent=gene93;Dbxref=Genbank:NP_624448.1,GeneID:1095530;Name=NP_624448.1;Note=SCJ11.34c%2C xlnC%2C endo-1%2C4-beta-xylanase ( hypothetical protein)%2C len: 241 aa%3B highly similar to many endo-1%2C4-beta-xylanases e.g. SW:XYNC_STRLI from Streptomyces lividans (240 aa) fasta scores%3B opt: 1605%2C z-score: 1785.1%2C E(): 0%2C (97.9%25 identity in 241 aa overlap) and SW:XYNA_BACSU from Bacillus subtilis (213 aa) fasta scores%3B opt: 813%2C z-score: 910.7%2C E(): 0%2C (58.8%25 identity in 221 aa overlap). Contains Pfam match to entry PF00457 Glyco_hydro_11%2C Glycosyl hydrolases family 11 and Prosite matches to PS00777 Glycosyl hydrolases family 11 active site signature 2 and PS00776 Glycosyl hydrolases family 11 active site signature 1;gbkey=CDS;gene=SCJ11.34c;product=endo-1%2C4-beta-xylanase;protein_id=NP_624448.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	87916	88458	.	-	.	ID=id62;Dbxref=GeneID:1095530;Note=Pfam match to entry PF00457 Glyco_hydro_11%2C Glycosyl hydrolases family 11%2C score 418.50%2C E-value 6.2e-122;gbkey=misc_feature;gene=SCJ11.34c
NC_003888.3	RefSeq	sequence_feature	87928	87963	.	-	.	ID=id63;Dbxref=GeneID:1095530;Note=PS00777 Glycosyl hydrolases family 11 active site signature 2.;gbkey=misc_feature;gene=SCJ11.34c
NC_003888.3	RefSeq	sequence_feature	88207	88239	.	-	.	ID=id64;Dbxref=GeneID:1095530;Note=PS00776 Glycosyl hydrolases family 11 active site signature 1.;gbkey=misc_feature;gene=SCJ11.34c
NC_003888.3	RefSeq	sequence_feature	89033	90239	.	+	.	ID=id65;Note=Possible noncomposite drug resistance transposon.;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	89033	89161	.	+	.	ID=id66;Note=Part of inverted repeat bounding possible noncomposite drug resistance transposon.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	89073	89465	.	+	.	ID=gene94;Dbxref=GeneID:1095531;Name=SCJ11.35;gbkey=Gene;gene=SCJ11.35;gene_biotype=protein_coding;gene_synonym=SCJ11.35;locus_tag=SCO0106
NC_003888.3	RefSeq	CDS	89073	89465	.	+	0	ID=cds88;Parent=gene94;Dbxref=Genbank:NP_624449.1,GeneID:1095531;Name=NP_624449.1;Note=SCJ11.35%2C possible noncomposite drug resistance transposon transposase%2C len: 185 aa%3B similar to many e.g. TR:O69927 (EMBL:AL023861) IS1648 transposase from Streptomyces coelicolor (141 aa) fasta scores%3B opt: 432%2C z-score: 565.7 E(): 3.8e-24%2C (47.8%25 identity in 136 aa overlap).;gbkey=CDS;gene=SCJ11.35;product=insertion element transposase;protein_id=NP_624449.1;transl_table=11
NC_003888.3	RefSeq	gene	89486	90043	.	-	.	ID=gene95;Dbxref=GeneID:1095532;Name=SCJ11.36c;gbkey=Gene;gene=SCJ11.36c;gene_biotype=protein_coding;gene_synonym=SCJ11.36c;locus_tag=SCO0107
NC_003888.3	RefSeq	CDS	89486	90043	.	-	0	ID=cds89;Parent=gene95;Dbxref=Genbank:NP_624450.1,GeneID:1095532;Name=NP_624450.1;Note=SCJ11.36c%2C possible noncomposite drug resistance transposon aminoglycoside nucleotidyltransferase%2C len: 185 aa%3B some similarity to many involved in antibiotic resistance e.g. TR:Q53702 (EMBL:J03947) lincosaminide nucleotidyltransferase from Staphylococcus aureus (161 aa) fasta scores%3B opt: 176%2C z-score: 229.0%2C E(): 2.1e-05%2C (28.4%25 identity in 148 aa overlap);gbkey=CDS;gene=SCJ11.36c;product=aminoglycoside nucleotidyltransferase;protein_id=NP_624450.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	90111	90239	.	+	.	ID=id67;Note=Part of inverted repeat bounding possible noncomposite drug resistance transposon.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	90242	90391	.	+	.	ID=gene96;Dbxref=GeneID:1095533;Name=SCJ11.37;gbkey=Gene;gene=SCJ11.37;gene_biotype=protein_coding;gene_synonym=SCJ11.37;locus_tag=SCO0108
NC_003888.3	RefSeq	CDS	90242	90391	.	+	0	ID=cds90;Parent=gene96;Dbxref=Genbank:NP_624451.1,GeneID:1095533;Name=NP_624451.1;Note=SCJ11.37%2C unknown%2C len: 49 aa;gbkey=CDS;gene=SCJ11.37;product=hypothetical protein;protein_id=NP_624451.1;transl_table=11
NC_003888.3	RefSeq	gene	90395	90865	.	-	.	ID=gene97;Dbxref=GeneID:1095534;Name=SCJ11.38c;gbkey=Gene;gene=SCJ11.38c;gene_biotype=protein_coding;gene_synonym=SCJ11.38c;locus_tag=SCO0109
NC_003888.3	RefSeq	CDS	90395	90865	.	-	0	ID=cds91;Parent=gene97;Dbxref=Genbank:NP_624452.1,GeneID:1095534;Name=NP_624452.1;Note=SCJ11.38c%2C unknown%2C len: 156aa%3B shows similarity to human proteins involved in the expression of GAGE genes eg. TR:AAC33676 (EMBL:AF055473) GAGE-7 from Homo sapiens (Human) (116 aa) fasta scores%3B opt: 114%2C z-score: 144.7%2C E(): 1.1%2C (31.9%25 identity in 119 aa overlap).;gbkey=CDS;gene=SCJ11.38c;product=hypothetical protein;protein_id=NP_624452.1;transl_table=11
NC_003888.3	RefSeq	gene	90951	91790	.	-	.	ID=gene98;Dbxref=GeneID:1095535;Name=SCJ11.39c;gbkey=Gene;gene=SCJ11.39c;gene_biotype=protein_coding;gene_synonym=SCJ11.39c;locus_tag=SCO0110
NC_003888.3	RefSeq	CDS	90951	91790	.	-	0	ID=cds92;Parent=gene98;Dbxref=Genbank:NP_624453.1,GeneID:1095535;Name=NP_624453.1;Note=SCJ11.39c%2C possible DNA-binding protein%2C len: 279 aa%3B similar to TR:O86721 (EMBL:AL031515) hypothetical protein from Streptomyces coelicolor (272 aa) fasta scores%3B opt: 123%2C z-score: 148.4%2C E(): 0.66%2C (26.6%25 identity in 278 aa overlap). Contains possible helix-turn-helix motif 40-61 aa (+3.21 SD);gbkey=CDS;gene=SCJ11.39c;product=DNA-binding protein;protein_id=NP_624453.1;transl_table=11
NC_003888.3	RefSeq	gene	91977	92729	.	+	.	ID=gene99;Dbxref=GeneID:1095536;Name=SCJ11.40;gbkey=Gene;gene=SCJ11.40;gene_biotype=protein_coding;gene_synonym=SCJ11.40;locus_tag=SCO0111
NC_003888.3	RefSeq	CDS	91977	92729	.	+	0	ID=cds93;Parent=gene99;Dbxref=Genbank:NP_624454.1,GeneID:1095536;Name=NP_624454.1;Note=SCJ11.40%2C probable oxidoreductase%2C len: 753 aa%3B similar to many egs. TR:O32457 (EMBL:D87924) ORF7 from the polyketide synthase cluster of Actinomadura hibisca (246 aa) fasta scores%3B opt: 480%2C z-score: 498.5%2C E(): 2.1e-20%2C (38.3%25 identity in 248 aa overlap) and TR:Q54810 (EMBL:L35560) reductase from the doxorubicin polyketide synthase cluster of Streptomyces peucetius (251 aa) fasta scores%3B opt: 408%2C z-score: 425.7%2C E(): 2.4e-16%2C (33.7%25 identity in 243 aa overlap). Contains Pfam matches to entry PF00106 adh_short%2C short chain dehydrogenase and to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCJ11.40;product=oxidoreductase;protein_id=NP_624454.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	91998	92537	.	+	.	ID=id68;Dbxref=GeneID:1095536;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 199.10%2C E-value 6.7e-56;gbkey=misc_feature;gene=SCJ11.40
NC_003888.3	RefSeq	sequence_feature	92388	92474	.	+	.	ID=id69;Dbxref=GeneID:1095536;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SCJ11.40
NC_003888.3	RefSeq	sequence_feature	92613	92705	.	+	.	ID=id70;Dbxref=GeneID:1095536;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 32.90%2C E-value 7.4e-06;gbkey=misc_feature;gene=SCJ11.40
NC_003888.3	RefSeq	sequence_feature	92696	92698	.	+	.	ID=id71;Dbxref=GeneID:1095536;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCJ11.40
NC_003888.3	RefSeq	gene	92773	92928	.	-	.	ID=gene100;Dbxref=GeneID:1095537;Name=SCJ11.41c;gbkey=Gene;gene=SCJ11.41c;gene_biotype=protein_coding;gene_synonym=SCJ11.41c;locus_tag=SCO0112
NC_003888.3	RefSeq	CDS	92773	92928	.	-	0	ID=cds94;Parent=gene100;Dbxref=Genbank:NP_624455.1,GeneID:1095537;Name=NP_624455.1;Note=SCJ11.41c%2C improbable CDS%2C function unknown%2C len: 51aa%3B predicted by GC Frameplot.;gbkey=CDS;gene=SCJ11.41c;product=hypothetical protein;protein_id=NP_624455.1;transl_table=11
NC_003888.3	RefSeq	gene	92961	93257	.	+	.	ID=gene101;Dbxref=GeneID:1095538;Name=SCJ11.42;gbkey=Gene;gene=SCJ11.42;gene_biotype=pseudogene;gene_synonym=SCJ11.42;locus_tag=SCO0113;pseudo=true
NC_003888.3	RefSeq	sequence_feature	92961	93257	.	+	.	ID=id72;Dbxref=GeneID:1095538;Note=SCJ11.42%2C possible pseudogene%2C len: 98 aa%3B predicted from codon and amino acid usage but lacking a start codon;gbkey=misc_feature;gene=SCJ11.42
NC_003888.3	RefSeq	gene	93292	94117	.	-	.	ID=gene102;Dbxref=GeneID:1095539;Name=SCJ11.43c;gbkey=Gene;gene=SCJ11.43c;gene_biotype=pseudogene;gene_synonym=SCJ11.43c,SCJ11.44c;locus_tag=SCO0114;pseudo=true
NC_003888.3	RefSeq	sequence_feature	93292	94117	.	-	.	ID=id73;Dbxref=GeneID:1095539;Note=SCJ11.43c%2C possible transposase%2C len: 86 aa%3B similar to many eg. TR:O69847 (EMBL:AL023702) insertion element IS1647 transposase (150 aa) from Streptomyces coelicolor (150 aa) fasta scores%3B opt: 197%2C z-score: 294.5%2C E(): 4.8e-09%2C (42.1%25 identity in 76 aa overlap). Lacks a stop codon and start codon is probably fortuitous.~SCJ11.44c%2C possible transposase%2C len: 174 aa%3B similar to but longer than many eg. TR:O69846 (EMBL:AL023702) insertion element IS1647 transposase from Streptomyces coelicolor (119 aa) fasta scores%3B opt: 276%2C z-score: 344.8%2C E(): 7.6e-12%2C (40.4%25 identity in 114 aa overlap).%3Btransposase;gbkey=misc_feature;gene=SCJ11.43c
NC_003888.3	RefSeq	repeat_region	93593	94117	.	-	.	ID=id74;Dbxref=GeneID:1095539;Note=Inverted and repeated degenerately at 8087-8935bp.;gbkey=repeat_region;gene=SCJ11.43c
NC_003888.3	RefSeq	gene	94306	94872	.	-	.	ID=gene103;Dbxref=GeneID:1095540;Name=SCJ11.45c;gbkey=Gene;gene=SCJ11.45c;gene_biotype=protein_coding;gene_synonym=SCJ11.45c;locus_tag=SCO0116
NC_003888.3	RefSeq	CDS	94306	94872	.	-	0	ID=cds95;Parent=gene103;Dbxref=Genbank:NP_624456.1,GeneID:1095540;Name=NP_624456.1;Note=SCJ11.45c%2C possible tetR-family transcriptional regulator%2C len: 188 aa%3B N-terminal region similar to that of others e.g. SW:ACRR_ECOLI potential AcrAB operon repressor (215 aa) fasta scores%3B opt: 148%2C z-score: 188.9%2C E(): 0.0037%2C (39.3%25 identity in 61 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Also contains possible helix-turn-helix motif 32-53aa (+3.34 SD).;gbkey=CDS;gene=SCJ11.45c;product=TetR family transcriptional regulator;protein_id=NP_624456.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	94690	94827	.	-	.	ID=id75;Dbxref=GeneID:1095540;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 24.20%2C E-value 5.4e-05;gbkey=misc_feature;gene=SCJ11.45c
NC_003888.3	RefSeq	gene	94989	95681	.	+	.	ID=gene104;Dbxref=GeneID:1095541;Name=SCJ11.46;gbkey=Gene;gene=SCJ11.46;gene_biotype=protein_coding;gene_synonym=SCJ11.46;locus_tag=SCO0117
NC_003888.3	RefSeq	CDS	94989	95681	.	+	0	ID=cds96;Parent=gene104;Dbxref=Genbank:NP_624457.1,GeneID:1095541;Name=NP_624457.1;Note=SCJ11.46%2C possible oxidoreductase%2C len: 230 aa%3B similar to many proposed oxidoreductases eg. TR:O53324 (EMBL:AL021646) oxidoreductase from Mycobacterium tuberculosis (235 aa) fasta scores%3B opt: 626%2C z-score: 717.5%2C E(): 1.3e-32%2C (50.9%25 identity in 224 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCJ11.46;product=short chain dehydrogenase;protein_id=NP_624457.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	95004	95519	.	+	.	ID=id76;Dbxref=GeneID:1095541;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 121.40%2C E-value 1.7e-32;gbkey=misc_feature;gene=SCJ11.46
NC_003888.3	RefSeq	sequence_feature	95370	95456	.	+	.	ID=id77;Dbxref=GeneID:1095541;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SCJ11.46
NC_003888.3	RefSeq	gene	95989	97518	.	+	.	ID=gene105;Dbxref=GeneID:1095542;Name=SCJ11.47;gbkey=Gene;gene=SCJ11.47;gene_biotype=protein_coding;gene_synonym=SCJ11.47;locus_tag=SCO0118
NC_003888.3	RefSeq	CDS	95989	97518	.	+	0	ID=cds97;Parent=gene105;Dbxref=Genbank:NP_624458.1,GeneID:1095542;Name=NP_624458.1;Note=SCJ11.47%2C possible xylosidase/arabinosidase%2C len: 509aa%3B similar to many xylosidase/arabinosidases especially in the N-terminal xylosidase region e.g. SW:XYLB_BUTFI xylosidase/arabinosidase from Butyrivibrio fibrisolvens (517 aa) fasta scores%3B opt: 582%2C z-score: 640.5%2C E(): 2.6e-28%2C (35.2%25 identity in 526 aa overlap);gbkey=CDS;gene=SCJ11.47;product=xylosidase/arabinosidase;protein_id=NP_624458.1;transl_table=11
NC_003888.3	RefSeq	gene	97760	98281	.	-	.	ID=gene106;Dbxref=GeneID:1095543;Name=SCJ11.48c;gbkey=Gene;gene=SCJ11.48c;gene_biotype=protein_coding;gene_synonym=SCJ11.48c;locus_tag=SCO0119
NC_003888.3	RefSeq	CDS	97760	98281	.	-	0	ID=cds98;Parent=gene106;Dbxref=Genbank:NP_624459.1,GeneID:1095543;Name=NP_624459.1;Note=SCJ11.48c%2C possible small hypothetical protein%2C len: 173aa%3B contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCJ11.48c;product=hypothetical protein;protein_id=NP_624459.1;transl_table=11
NC_003888.3	RefSeq	gene	98463	99338	.	-	.	ID=gene107;Dbxref=GeneID:1095544;Name=SCJ11.49c;gbkey=Gene;gene=SCJ11.49c;gene_biotype=protein_coding;gene_synonym=SCJ11.49c,SCJ21.01c;locus_tag=SCO0120
NC_003888.3	RefSeq	CDS	98463	99338	.	-	0	ID=cds99;Parent=gene107;Dbxref=Genbank:NP_733490.1,GeneID:1095544;Name=NP_733490.1;Note=SCJ21.01c%2C probable integral membrane protein%2C partial CDS%2C len: >114 aa~SCJ11.49c%2C probable integral membrane protein%2C len: >222aa%3B contains probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCJ11.49c;product=hypothetical protein;protein_id=NP_733490.1;transl_table=11
NC_003888.3	RefSeq	gene	99335	99949	.	-	.	ID=gene108;Dbxref=GeneID:1095545;Name=SCJ21.02c;gbkey=Gene;gene=SCJ21.02c;gene_biotype=protein_coding;gene_synonym=SCJ21.02c;locus_tag=SCO0121
NC_003888.3	RefSeq	CDS	99335	99949	.	-	0	ID=cds100;Parent=gene108;Dbxref=Genbank:NP_624460.1,GeneID:1095545;Name=NP_624460.1;Note=SCJ21.02c%2C probable ABC transport system ATP-binding protein%2C len: 204 aa%3B similar to many e.g. NUC_ECOLI high-affinity zinc uptake system ATP-binding protein (251 aa)%2C fasta scores%3B opt: 327 z-score: 404.3 E(): 3.6e-15%2C 35.2%25 identity in 179 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry PF00005 ABC_tran%2C ABC transporter;gbkey=CDS;gene=SCJ21.02c;product=ABC transporter ATP-binding protein;protein_id=NP_624460.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	99346	99350	.	-	.	ID=id78;Dbxref=GeneID:1095545;gbkey=RBS;gene=SCJ21.02c
NC_003888.3	RefSeq	sequence_feature	99377	99874	.	-	.	ID=id79;Dbxref=GeneID:1095545;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 147.80%2C E-value 1.9e-40;gbkey=misc_feature;gene=SCJ21.02c
NC_003888.3	RefSeq	sequence_feature	99830	99853	.	-	.	ID=id80;Dbxref=GeneID:1095545;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCJ21.02c
NC_003888.3	RefSeq	ribosome_entry_site	99957	99960	.	-	.	ID=id81;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	100176	100179	.	+	.	ID=id82;gbkey=RBS
NC_003888.3	RefSeq	gene	100190	101566	.	+	.	ID=gene109;Dbxref=GeneID:1095546;Name=SCJ21.03;gbkey=Gene;gene=SCJ21.03;gene_biotype=protein_coding;gene_synonym=SCJ21.03;locus_tag=SCO0122
NC_003888.3	RefSeq	CDS	100190	101566	.	+	0	ID=cds101;Parent=gene109;Dbxref=Genbank:NP_624461.1,GeneID:1095546;Name=NP_624461.1;Note=SCJ21.03%2C probable flavin-containing monooxygenase (hypothetical protein)%2C len: 458 aa%3B similar to many eukaryotic monooxygenases%2C e.g. FMO5_RABIT dimethylaniline monooxygenase [N-oxide forming] (532 aa)%2C fasta scores%3B opt: 938 z-score: 1016.9 E(): 0%2C 38.7%25 identity in 432 aa overlap. Also similar to S. coelicolor  oxidoreductase SCH35.27 E(): 3.4e-07%2C 34.8%25 identity in 282 aa overlap. Contains Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like;gbkey=CDS;gene=SCJ21.03;product=flavin-containing monooxygenase;protein_id=NP_624461.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	100190	101563	.	+	.	ID=id83;Dbxref=GeneID:1095546;Note=Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like%2C score 47.90%2C E-value 7.5e-25;gbkey=misc_feature;gene=SCJ21.03
NC_003888.3	RefSeq	gene	101656	103002	.	-	.	ID=gene110;Dbxref=GeneID:1095547;Name=SCJ21.04c;gbkey=Gene;gene=SCJ21.04c;gene_biotype=protein_coding;gene_synonym=SCJ21.04c;locus_tag=SCO0123
NC_003888.3	RefSeq	CDS	101656	103002	.	-	0	ID=cds102;Parent=gene110;Dbxref=Genbank:NP_624462.1,GeneID:1095547;Name=NP_624462.1;Note=SCJ21.04c%2C unknown%2C len: 448 aa%3B some similarity to M. tuberculosis hypothetical protein TR:P71694 (EMBL:Z95844) Rv1425 (459 aa)%2C fasta scores%3B opt: 150 z-score: 166.6 E(): 0.063%2C 23.9%25 identity in 464 aa overlap;gbkey=CDS;gene=SCJ21.04c;product=hypothetical protein;protein_id=NP_624462.1;transl_table=11
NC_003888.3	RefSeq	gene	103628	104989	.	+	.	ID=gene111;Dbxref=GeneID:1095548;Name=SCJ21.05;gbkey=Gene;gene=SCJ21.05;gene_biotype=protein_coding;gene_synonym=SCJ21.05;locus_tag=SCO0124
NC_003888.3	RefSeq	CDS	103628	104989	.	+	0	ID=cds103;Parent=gene111;Dbxref=Genbank:NP_624463.1,GeneID:1095548;Name=NP_624463.1;Note=SCJ21.05%2C unknown%2C len: 453 aa%3B similar in part to several polyketide synthases%2C e.g. HETM_ANASP polyketide synthase HETM (506 aa)%2C fasta scores%3B opt: 252 z-score: 267.0 E(): 1.6e-07%2C 33.7%25 identity in 199 aa overlap%2C and TR:Q50858 (EMBL:U24657) saframycin MX1 synthetase A (2605 aa)%2C fasta scores%3B opt: 244 z-score: 248.0 E(): 1.9e-06%2C 28.5%25 identity in 372 aa overlap. Contains TTA Leu codon%3B possible target for regulation by bldA;gbkey=CDS;gene=SCJ21.05;product=hypothetical protein;protein_id=NP_624463.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	103829	103831	.	+	.	ID=id84;Dbxref=GeneID:1095548;Note=TTA Leu codon%3B possible target for regulation by bldA;gbkey=misc_feature;gene=SCJ21.05
NC_003888.3	RefSeq	ribosome_entry_site	105048	105051	.	+	.	ID=id85;gbkey=RBS
NC_003888.3	RefSeq	gene	105057	106640	.	+	.	ID=gene112;Dbxref=GeneID:1095549;Name=SCJ21.06;gbkey=Gene;gene=SCJ21.06;gene_biotype=protein_coding;gene_synonym=SCJ21.06;locus_tag=SCO0125
NC_003888.3	RefSeq	CDS	105057	106640	.	+	0	ID=cds104;Parent=gene112;Dbxref=Genbank:NP_624464.1,GeneID:1095549;Name=NP_624464.1;Note=SCJ21.06%2C possible oxidoreductase%2C len: 527 aa%3B similar to hypothetical proteins associated with fatty acid or polyketide biosynthesis e.g. TR:O33907 (EMBL:U73935) hypothetical protein in eicosapentaenoic acid synthesis gene cluster from Shewanella sp. (543 aa)%2C fasta scores%3B opt: 1474 z-score: 1595.4 E(): 0%2C 48.1%25 identity in 472 aa overlap%3B and TR:Q44210 (EMBL:U04436) ORF in region required for nitrogen fixation in Anabaena 7120 (442 aa)%2C fasta scores%3B opt: 1395 z-score: 1511.4 E(): 0%2C 47.7%25 identity in 440 aa overlap. Also shows some similarity to predicted oxidoreductase from M. tuberculosis TR:O33323 oxidoreductase RV2781c (344 aa)%2C fasta scores%3B opt: 161 z-score: 179.6 E(): 0.012%2C 26.7%25 identity in 277 aa overlap;gbkey=CDS;gene=SCJ21.06;product=oxidoreductase;protein_id=NP_624464.1;transl_table=11
NC_003888.3	RefSeq	gene	106637	112885	.	+	.	ID=gene113;Dbxref=GeneID:1095550;Name=SCJ21.07;gbkey=Gene;gene=SCJ21.07;gene_biotype=protein_coding;gene_synonym=SCJ21.07;locus_tag=SCO0126
NC_003888.3	RefSeq	CDS	106637	112885	.	+	0	ID=cds105;Parent=gene113;Dbxref=Genbank:NP_624465.1,GeneID:1095550;Name=NP_624465.1;Note=SCJ21.07%2C probable multi-domain beta keto-acyl synthase%2C len: 2082 aa%3B similar to proteins involved in fatty acid or polyketide biosynthesis e.g. TR:O30776 (EMBL:) heterocyst glycolipid synthase HglE (1053 aa)%2C fasta scores%3B opt: 2382 z-score: 1897.1 E(): 0%2C 41.6%25 identity in 1013 aa overlap%2C and TR:O54142 (EMBL:AL021530) S. coelicolor polyketide synthase RedX (982 aa)%2C fasta scores%3B opt: 910 z-score: 728.5 E(): 0%2C 37.4%25 identity in 494 aa overlap. Contains 2x Pfam matches to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C and Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site;gbkey=CDS;gene=SCJ21.07;product=beta keto-acyl synthase;protein_id=NP_624465.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	106724	108088	.	+	.	ID=id86;Dbxref=GeneID:1095550;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 370.70%2C E-value 1.6e-107;gbkey=misc_feature;gene=SCJ21.07
NC_003888.3	RefSeq	sequence_feature	108461	109447	.	+	.	ID=id87;Dbxref=GeneID:1095550;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 210.50%2C E-value 2.5e-59;gbkey=misc_feature;gene=SCJ21.07
NC_003888.3	RefSeq	sequence_feature	110228	110437	.	+	.	ID=id88;Dbxref=GeneID:1095550;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 20.50%2C E-value 0.00048;gbkey=misc_feature;gene=SCJ21.07
NC_003888.3	RefSeq	gene	112932	119654	.	+	.	ID=gene114;Dbxref=GeneID:1095551;Name=SCJ21.08;gbkey=Gene;gene=SCJ21.08;gene_biotype=protein_coding;gene_synonym=SCJ21.08;locus_tag=SCO0127
NC_003888.3	RefSeq	CDS	112932	119654	.	+	0	ID=cds106;Parent=gene114;Dbxref=Genbank:NP_624466.1,GeneID:1095551;Name=NP_624466.1;Note=SCJ21.08%2C probable multi-domain beta keto-acyl synthase%2C len: 2240 aa%3B similar to proteins involved in fatty acid or polyketide biosynthesis e.g. TR:Q44221 Anabaena sp. type 4 polyketide synthases HglD (fragment) (448 aa)%2C fasta scores%3B opt: 760 z-score: 639.3 E(): 2.9e-28%2C 38.0%25 identity in 392 aa overlap%3B MCAS_MYCBO mycocerosic acid synthase (2110 aa)%2C fasta scores opt: 707 z-score: 586.8 E(): 2.5e-25%2C 35.4%25 identity in 560 aa overlap%3B and TR:O54142 (EMBL:AL021530) S. coelicolor polyketide synthase RedX (982 aa)%2C opt: 658 z-score: 550.3 E(): 2.7e-23%2C 36.4%25 identity in 470 aa overlap. Contains Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C and 2x Pfam matches to entry PF01377 Thioester_dehyd%2C Thioester dehydrase;gbkey=CDS;gene=SCJ21.08;product=beta keto-acyl synthase;protein_id=NP_624466.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	112947	114248	.	+	.	ID=id89;Dbxref=GeneID:1095551;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 255.20%2C E-value 9.1e-73;gbkey=misc_feature;gene=SCJ21.08
NC_003888.3	RefSeq	sequence_feature	115632	116603	.	+	.	ID=id90;Dbxref=GeneID:1095551;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score -20.20%2C E-value 9.5e-09;gbkey=misc_feature;gene=SCJ21.08
NC_003888.3	RefSeq	sequence_feature	117936	118361	.	+	.	ID=id91;Dbxref=GeneID:1095551;Note=Pfam match to entry PF01377 Thioester_dehyd%2C Thioester dehydrase%2C score 50.00%2C E-value 5.2e-11;gbkey=misc_feature;gene=SCJ21.08
NC_003888.3	RefSeq	sequence_feature	119151	119531	.	+	.	ID=id92;Dbxref=GeneID:1095551;Note=Pfam match to entry PF01377 Thioester_dehyd%2C Thioester dehydrase%2C score 30.60%2C E-value 1.8e-07;gbkey=misc_feature;gene=SCJ21.08
NC_003888.3	RefSeq	gene	119651	119833	.	+	.	ID=gene115;Dbxref=GeneID:1095552;Name=SCJ21.09;gbkey=Gene;gene=SCJ21.09;gene_biotype=protein_coding;gene_synonym=SCJ21.09;locus_tag=SCO0128
NC_003888.3	RefSeq	CDS	119651	119833	.	+	0	ID=cds107;Parent=gene115;Dbxref=Genbank:NP_624467.1,GeneID:1095552;Name=NP_624467.1;Note=SCJ21.09%2C unknown%2C len: 60 aa;gbkey=CDS;gene=SCJ21.09;product=hypothetical protein;protein_id=NP_624467.1;transl_table=11
NC_003888.3	RefSeq	gene	119841	120215	.	+	.	ID=gene116;Dbxref=GeneID:1095553;Name=SCJ21.10;gbkey=Gene;gene=SCJ21.10;gene_biotype=protein_coding;gene_synonym=SCJ21.10;locus_tag=SCO0129
NC_003888.3	RefSeq	CDS	119841	120215	.	+	0	ID=cds108;Parent=gene116;Dbxref=Genbank:NP_624468.1,GeneID:1095553;Name=NP_624468.1;Note=SCJ21.10%2C unknown%2C len: 124 aa;gbkey=CDS;gene=SCJ21.10;product=hypothetical protein;protein_id=NP_624468.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	120446	120449	.	+	.	ID=id93;gbkey=RBS
NC_003888.3	RefSeq	gene	120457	121371	.	+	.	ID=gene117;Dbxref=GeneID:1095554;Name=SCJ21.11;gbkey=Gene;gene=SCJ21.11;gene_biotype=protein_coding;gene_synonym=SCJ21.11;locus_tag=SCO0130
NC_003888.3	RefSeq	CDS	120457	121371	.	+	0	ID=cds109;Parent=gene117;Dbxref=Genbank:NP_624469.1,GeneID:1095554;Name=NP_624469.1;Note=SCJ21.11%2C possible beta-lactamase%2C len%3B 304 aa%3B some similarity to S. coelicolor TR:CAB39710 (EMBL:AL049485)  beta-lactamase SC6A5.26C (310 aa)%2C fasta scores%3B opt: 197 z-score: 236.5 E(): 8e-06%2C 28.1%25 identity in 295 aa overlap%2C and TR:O34760 (EMBL:AF008220) Bacillus subtilis YtnP (256 aa)%2C fasta scores%3B opt: 189 z-score: 228.5 E(): 2.2e-05%2C 25.1%25 identity in 191 aa overlap and similar to TR:Q9ALW1 (EMBL:AF338729) Plesiomonas sp. M6 methyl parathion hydrolase Mpd%2C 331 aa%3B fasta scores: opt: 511 Z-score: 578.8 bits: 115.3 E(): 1.3e-24%3B 31.61%25 identity in 310 aa overlap;gbkey=CDS;gene=SCJ21.11;product=beta-lactamase;protein_id=NP_624469.1;transl_table=11
NC_003888.3	RefSeq	gene	121617	122456	.	-	.	ID=gene118;Dbxref=GeneID:1095555;Name=SCJ21.12c;gbkey=Gene;gene=SCJ21.12c;gene_biotype=protein_coding;gene_synonym=SCJ21.12c;locus_tag=SCO0131
NC_003888.3	RefSeq	CDS	121617	122456	.	-	0	ID=cds110;Parent=gene118;Dbxref=Genbank:NP_624470.1,GeneID:1095555;Name=NP_624470.1;Note=SCJ21.12c%2C probable hypothetical protein%2C len: 279 aa%3B similar to hypothetical proteins e.g. YBHP_ECOLI (253 aa)%2C fasta scores%3B opt: 244 z-score: 290.0 E(): 8.4e-09%2C 29.5%25 identity in 251 aa overlap. Also similar to S. coelicolor TR:Q9ZBN3 (EMBL:AL034492) SC6C5.12C (276 aa)%2C fasta scores%3B opt: 474 z-score: 555.0 E(): 1.5e-23%2C 41.0%25 identity in 278 aa overlap;gbkey=CDS;gene=SCJ21.12c;product=hypothetical protein;protein_id=NP_624470.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	122463	122468	.	-	.	ID=id94;gbkey=RBS
NC_003888.3	RefSeq	gene	122743	125502	.	+	.	ID=gene119;Dbxref=GeneID:1095556;Name=SCJ21.13;gbkey=Gene;gene=SCJ21.13;gene_biotype=protein_coding;gene_synonym=SCJ21.13;locus_tag=SCO0132
NC_003888.3	RefSeq	CDS	122743	125502	.	+	0	ID=cds111;Parent=gene119;Dbxref=Genbank:NP_624471.1,GeneID:1095556;Name=NP_624471.1;Note=SCJ21.13%2C probable transcriptional regulator%2C len: 919 aa%3B similar to many e.g. TR:AAD28307 (EMBL:U95170) Rhodococcus erythropolis ThcG (927 aa)%2C fasta scores%3B opt: 1176 z-score: 1258.4 E(): 0%2C 34.2%25 identity in 933 aa overlap%2C and TR:AAA53487 (EMBL:U03114) Streptomyces albus LipR (890 aa)%2C fasta scores%3B opt: 740 z-score: 791.4 E(): 0%2C 31.1%25 identity in 952 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop)%2C Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C and probable helix-turn-helix motif at aa 871-892 (Score 1389%2C +3.92 SD);gbkey=CDS;gene=SCJ21.13;product=transcriptional regulator;protein_id=NP_624471.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	122848	122871	.	+	.	ID=id95;Dbxref=GeneID:1095556;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCJ21.13
NC_003888.3	RefSeq	sequence_feature	125296	125493	.	+	.	ID=id96;Dbxref=GeneID:1095556;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 59.20%2C E-value 8.8e-14;gbkey=misc_feature;gene=SCJ21.13
NC_003888.3	RefSeq	gene	125625	126005	.	-	.	ID=gene120;Dbxref=GeneID:1095557;Name=SCJ21.14c;gbkey=Gene;gene=SCJ21.14c;gene_biotype=protein_coding;gene_synonym=SCJ21.14c;locus_tag=SCO0133
NC_003888.3	RefSeq	CDS	125625	126005	.	-	0	ID=cds112;Parent=gene120;Dbxref=Genbank:NP_624472.1,GeneID:1095557;Name=NP_624472.1;Note=SCJ21.14c%2C unknown%2C len: 126 aa;gbkey=CDS;gene=SCJ21.14c;product=hypothetical protein;protein_id=NP_624472.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	126014	126017	.	-	.	ID=id97;gbkey=RBS
NC_003888.3	RefSeq	gene	126989	127294	.	-	.	ID=gene121;Dbxref=GeneID:1095558;Name=SCJ21.15c;gbkey=Gene;gene=SCJ21.15c;gene_biotype=protein_coding;gene_synonym=SCJ21.15c;locus_tag=SCO0134
NC_003888.3	RefSeq	CDS	126989	127294	.	-	0	ID=cds113;Parent=gene121;Dbxref=Genbank:NP_624473.1,GeneID:1095558;Name=NP_624473.1;Note=SCJ21.15c%2C unknown%2C len: 101 aa;gbkey=CDS;gene=SCJ21.15c;product=hypothetical protein;protein_id=NP_624473.1;transl_table=11
NC_003888.3	RefSeq	gene	127571	128290	.	+	.	ID=gene122;Dbxref=GeneID:1095559;Name=SCJ21.16;gbkey=Gene;gene=SCJ21.16;gene_biotype=protein_coding;gene_synonym=SCJ21.16;locus_tag=SCO0135
NC_003888.3	RefSeq	CDS	127571	128290	.	+	0	ID=cds114;Parent=gene122;Dbxref=Genbank:NP_624474.1,GeneID:1095559;Name=NP_624474.1;Note=SCJ21.16%2C unknown%2C len: 239 aa%3B similar to two hypothetical proteins from S. coelicolor TR:O86620 (EMBL:AL031155) SC3A7.19 (232 aa)%2C fasta scores%3B opt: 188 z-score: 222.0 E(): 5.1e-05%2C 33.6%25 identity in 238 aa overlap%2C and TR:Q9ZBN4 (EMBL:AL034492) SC6C5.11 (327 aa)%2C fasta scores%3B opt: 149 z-score: 176.2 E(): 0.018%2C 30.0%25 identity in 203 aa overlapand to TR:Q988L9 (EMBL:AP003009) Rhizobium loti MLR6684 protein%2C 259 aa%3B fasta scores: opt: 764 Z-score: 831.4 E(): 1.1e-38%3B 51.883%25 identity in 239 aa overlap;gbkey=CDS;gene=SCJ21.16;product=hypothetical protein;protein_id=NP_624474.1;transl_table=11
NC_003888.3	RefSeq	gene	128634	130184	.	-	.	ID=gene123;Dbxref=GeneID:1095560;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=SCO0136
NC_003888.3	RefSeq	CDS	128634	130184	.	-	0	ID=cds115;Parent=gene123;Dbxref=Genbank:NP_624475.1,GeneID:1095560;Name=NP_624475.1;Note=membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;gbkey=CDS;gene=ulaA;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=NP_624475.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	130196	130199	.	-	.	ID=id98;gbkey=RBS
NC_003888.3	RefSeq	gene	130201	131001	.	-	.	ID=gene124;Dbxref=GeneID:1095561;Name=SCJ21.18c;gbkey=Gene;gene=SCJ21.18c;gene_biotype=protein_coding;gene_synonym=SCJ21.18c,SCJ33.01c;locus_tag=SCO0137
NC_003888.3	RefSeq	CDS	130201	131001	.	-	0	ID=cds116;Parent=gene124;Dbxref=Genbank:NP_733491.1,GeneID:1095561;Name=NP_733491.1;Note=SCJ21.18c%2C unknown%2C partial CDS%2C len >170 aa~SCJ33.01c%2C sugar-transport protein%2C partial CDS%2C len: > 138 aa. Similar to many e.g. Escherichia coli SW: PTXA_ECOLI (EMBL%3B U14003) unknown pentitol phosphotransferase enzyme II%2C A component (EC 2.7.1.69) (154 aa)%2C fasta scores opt: 313 z-score: 403.6 E(): 4.1e-15 38.3%25 identity in 133 aa overlap. Overlaps with and extends into CDS SCJ21.18c. Contains a Pfam match to entry PF00359 PTS_EIIA_2%2C phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2.;gbkey=CDS;gene=SCJ21.18c;product=sugar-transport protein;protein_id=NP_733491.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	130738	130929	.	-	.	ID=id99;Dbxref=GeneID:1095561;Note=Pfam match to entry PF00359 PTS_EIIA_2%2C phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C score 37.60%2C E-value 4.9e-09;gbkey=misc_feature;gene=SCJ21.18c
NC_003888.3	RefSeq	ribosome_entry_site	131011	131018	.	-	.	ID=id100;gbkey=RBS
NC_003888.3	RefSeq	gene	131523	132296	.	+	.	ID=gene125;Dbxref=GeneID:1095562;Name=SCJ33.02;gbkey=Gene;gene=SCJ33.02;gene_biotype=protein_coding;gene_synonym=SCJ33.02;locus_tag=SCO0138
NC_003888.3	RefSeq	CDS	131523	132296	.	+	0	ID=cds117;Parent=gene125;Dbxref=Genbank:NP_624476.1,GeneID:1095562;Name=NP_624476.1;Note=SCJ33.02%2C possible oxidoreductase%2C len: 257 aa. Similar to many other oxidoreductases including: Streptomyces cinnamonensis SW:DHKR_STRCM (EMBL%3B Z11511) monensin polyketide synthase ketoacyl reductase (EC 1.3.1.-) (261 aa)%2C fasta scores opt: 386 z-score: 426.3 E(): 2.2e-16 35.8%25 identity in 260 aa overlap. Contains a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature and a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SCJ33.02;product=short chain dehydrogenase;protein_id=NP_624476.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	131547	132077	.	+	.	ID=id101;Dbxref=GeneID:1095562;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 85.20%2C E-value 1.4e-21;gbkey=misc_feature;gene=SCJ33.02
NC_003888.3	RefSeq	sequence_feature	131928	132014	.	+	.	ID=id102;Dbxref=GeneID:1095562;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCJ33.02
NC_003888.3	RefSeq	sequence_feature	132177	132269	.	+	.	ID=id103;Dbxref=GeneID:1095562;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 50.60%2C E-value 3.6e-11;gbkey=misc_feature;gene=SCJ33.02
NC_003888.3	RefSeq	ribosome_entry_site	132317	132320	.	+	.	ID=id104;gbkey=RBS
NC_003888.3	RefSeq	gene	132327	132647	.	+	.	ID=gene126;Dbxref=GeneID:1095563;Name=SCJ33.03;gbkey=Gene;gene=SCJ33.03;gene_biotype=protein_coding;gene_synonym=SCJ33.03;locus_tag=SCO0139
NC_003888.3	RefSeq	CDS	132327	132647	.	+	0	ID=cds118;Parent=gene126;Dbxref=Genbank:NP_624477.1,GeneID:1095563;Name=NP_624477.1;Note=SCJ33.03%2C unknown%2C len: 106 aa.;gbkey=CDS;gene=SCJ33.03;product=hypothetical protein;protein_id=NP_624477.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	132679	132684	.	+	.	ID=id105;gbkey=RBS
NC_003888.3	RefSeq	gene	132693	133520	.	+	.	ID=gene127;Dbxref=GeneID:1095564;Name=SCJ33.04;gbkey=Gene;gene=SCJ33.04;gene_biotype=protein_coding;gene_synonym=SCJ33.04;locus_tag=SCO0140
NC_003888.3	RefSeq	CDS	132693	133520	.	+	0	ID=cds119;Parent=gene127;Dbxref=Genbank:NP_624478.1,GeneID:1095564;Name=NP_624478.1;Note=SCJ33.04%2C possible merR-family transcriptional regulator%2C len: 275 aa. Similar to several e.g. Streptomyces coelicolor TR:CAB56383 (EMBL%3B AL118515) merR family transcriptional regulator SCD17.06C (319 aa)%2C fasta scores opt: 164 z-score: 194.6 E(): 0.0018 28.9%25 identity in 298 aa overlap and Bacillus subtilis SW:BLTR_BACSU (EMBL%3B L32599) multidrug-efflux transporter 2 regulator (273 aa)%2C fasta scores opt: 154 z-score: 184.2 E(): 0.0069 21.3%25 identity in 253 aa overlap. Contains a Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family. Contains a possible helix-turn-helix motif located between residues 6..27 (+3.26 SD).;gbkey=CDS;gene=SCJ33.04;product=MerR family transcriptional regulator;protein_id=NP_624478.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	132714	132824	.	+	.	ID=id106;Dbxref=GeneID:1095564;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 25.10%2C E-value 0.00069;gbkey=misc_feature;gene=SCJ33.04
NC_003888.3	RefSeq	gene	133570	134121	.	-	.	ID=gene128;Dbxref=GeneID:1095565;Name=SCJ33.05c;gbkey=Gene;gene=SCJ33.05c;gene_biotype=protein_coding;gene_synonym=SCJ33.05c;locus_tag=SCO0141
NC_003888.3	RefSeq	CDS	133570	134121	.	-	0	ID=cds120;Parent=gene128;Dbxref=Genbank:NP_624479.1,GeneID:1095565;Name=NP_624479.1;Note=SCJ33.05c%2C possible calcium-binding protein%2C len: 183 aa. Weakly similar to many Eukaryotic calcium-binding proteins e.g. Drosophila melanogaster (Fruit fly) TR:O16158 (EMBL:AF014952) calcium-binding protein (184 aa)%2C fasta scores opt: 265 z-score: 323.1 E(): 1.2e-10 28.1%25 identity in 178 aa overlap. Contains a 4xPfam match to entry PF00036 efhand%2C EF hand.;gbkey=CDS;gene=SCJ33.05c;product=calcium-binding protein;protein_id=NP_624479.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	133642	133728	.	-	.	ID=id107;Dbxref=GeneID:1095565;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 7.10%2C E-value 2.3;gbkey=misc_feature;gene=SCJ33.05c
NC_003888.3	RefSeq	sequence_feature	133744	133830	.	-	.	ID=id108;Dbxref=GeneID:1095565;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 2.60%2C E-value 8;gbkey=misc_feature;gene=SCJ33.05c
NC_003888.3	RefSeq	sequence_feature	133858	133926	.	-	.	ID=id109;Dbxref=GeneID:1095565;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 6.30%2C E-value 2.9;gbkey=misc_feature;gene=SCJ33.05c
NC_003888.3	RefSeq	sequence_feature	134011	134097	.	-	.	ID=id110;Dbxref=GeneID:1095565;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 21.90%2C E-value 0.015;gbkey=misc_feature;gene=SCJ33.05c
NC_003888.3	RefSeq	gene	134295	136100	.	-	.	ID=gene129;Dbxref=GeneID:1095566;Name=SCJ33.06c;gbkey=Gene;gene=SCJ33.06c;gene_biotype=protein_coding;gene_synonym=SCJ33.06c;locus_tag=SCO0142
NC_003888.3	RefSeq	CDS	134295	136100	.	-	0	ID=cds121;Parent=gene129;Dbxref=Genbank:NP_624480.1,GeneID:1095566;Name=NP_624480.1;Note=SCJ33.06c%2C unknown%2C len: 601 aa. Similar to the C-terminus of Mycobacterium tuberculosis hypothetical proteins SW:YS74_MYCTU (EMBL%3B Z74024) (695 aa)%2C fasta scores opt: 331 z-score: 375.0 E(): 1.6e-13 30.3%25 identity in 185 aa overlap and SW:YX05_MYCTU (EMBL%3B Z74024) (695 aa)%2C fasta scores opt: 331 z-score: 375.0 E(): 1.6e-13 30.3%25 identity in 185 aa overlap. Contains 5x Pfam match to entry PF01436 NHL%2C NHL repeat and possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCJ33.06c;product=hypothetical protein;protein_id=NP_624480.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	134709	134789	.	-	.	ID=id111;Dbxref=GeneID:1095566;Note=Pfam match to entry PF01436 NHL%2C NHL repeat%2C score 5.30%2C E-value 11;gbkey=misc_feature;gene=SCJ33.06c
NC_003888.3	RefSeq	sequence_feature	134829	134912	.	-	.	ID=id112;Dbxref=GeneID:1095566;Note=Pfam match to entry PF01436 NHL%2C NHL repeat%2C score 30.00%2C E-value 5.5e-05;gbkey=misc_feature;gene=SCJ33.06c
NC_003888.3	RefSeq	sequence_feature	134997	135077	.	-	.	ID=id113;Dbxref=GeneID:1095566;Note=Pfam match to entry PF01436 NHL%2C NHL repeat%2C score 2.10%2C E-value 27;gbkey=misc_feature;gene=SCJ33.06c
NC_003888.3	RefSeq	sequence_feature	135159	135239	.	-	.	ID=id114;Dbxref=GeneID:1095566;Note=Pfam match to entry PF01436 NHL%2C NHL repeat%2C score 4.40%2C E-value 14;gbkey=misc_feature;gene=SCJ33.06c
NC_003888.3	RefSeq	sequence_feature	135333	135416	.	-	.	ID=id115;Dbxref=GeneID:1095566;Note=Pfam match to entry PF01436 NHL%2C NHL repeat%2C score 22.70%2C E-value 0.0084;gbkey=misc_feature;gene=SCJ33.06c
NC_003888.3	RefSeq	ribosome_entry_site	136631	136636	.	+	.	ID=id116;gbkey=RBS
NC_003888.3	RefSeq	gene	136647	137183	.	+	.	ID=gene130;Dbxref=GeneID:1095567;Name=SCJ33.07;gbkey=Gene;gene=SCJ33.07;gene_biotype=protein_coding;gene_synonym=SCJ33.07;locus_tag=SCO0143
NC_003888.3	RefSeq	CDS	136647	137183	.	+	0	ID=cds122;Parent=gene130;Dbxref=Genbank:NP_624481.1,GeneID:1095567;Name=NP_624481.1;Note=SCJ33.07%2C possible membrane protein%2C len: 162 aa. Similar to the N-terminus of an E. coli SW:YJGJ_ECOLI (EMBL%3B U14003) hypothetical 21.5 KD protein in PYRL-ARGI intergenic region (197 aa)%2C fasta scores opt: 199 z-score: 239.3 E(): 5.8e-06 41.3%25 identity in 75 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCJ33.07;product=hypothetical protein;protein_id=NP_624481.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	137185	137188	.	+	.	ID=id117;gbkey=RBS
NC_003888.3	RefSeq	gene	137197	137556	.	+	.	ID=gene131;Dbxref=GeneID:1095568;Name=SCJ33.08;gbkey=Gene;gene=SCJ33.08;gene_biotype=protein_coding;gene_synonym=SCJ33.08;locus_tag=SCO0144
NC_003888.3	RefSeq	CDS	137197	137556	.	+	0	ID=cds123;Parent=gene131;Dbxref=Genbank:NP_624482.1,GeneID:1095568;Name=NP_624482.1;Note=SCJ33.08%2C unknown%2C len: 119 aa.;gbkey=CDS;gene=SCJ33.08;product=hypothetical protein;protein_id=NP_624482.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	137547	137554	.	+	.	ID=id118;Dbxref=GeneID:1095568;gbkey=RBS;gene=SCJ33.08
NC_003888.3	RefSeq	gene	137561	138589	.	+	.	ID=gene132;Dbxref=GeneID:1095569;Name=SCJ33.09;gbkey=Gene;gene=SCJ33.09;gene_biotype=protein_coding;gene_synonym=SCJ33.09;locus_tag=SCO0145
NC_003888.3	RefSeq	CDS	137561	138589	.	+	0	ID=cds124;Parent=gene132;Dbxref=Genbank:NP_624483.1,GeneID:1095569;Name=NP_624483.1;Note=SCJ33.09%2C possible hypothetical protein%2C len: 342 aa. Similar to Streptomyces coelicolor TR:CAB45466 (EMBL%3B AL079348) hypothetical 33.9 KD protein SC66T3.10C (318 aa)%2C fasta scores opt: 272 z-score: 301.5 E(): 2e-09 34.0%25 identity in 300 aa overlap. Contains a TTA /leucine codon%2C possible target for bldA regulation. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCJ33.09;product=hypothetical protein;protein_id=NP_624483.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	137801	137803	.	+	.	ID=id119;Dbxref=GeneID:1095569;Note=TTA/leucine codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCJ33.09
NC_003888.3	RefSeq	gene	138618	138761	.	-	.	ID=gene133;Dbxref=GeneID:1095570;Name=SCJ33.10c;gbkey=Gene;gene=SCJ33.10c;gene_biotype=pseudogene;gene_synonym=SCJ33.10c;locus_tag=SCO0146;pseudo=true
NC_003888.3	RefSeq	sequence_feature	138618	138761	.	-	.	ID=id120;Dbxref=GeneID:1095570;Note=SCJ33.10c%2C transposase%2C pseudogene fragment%2C len: 48 aa. Gene fragment which is highly similar to Streptomyces coelicolor SW:YM3_STRCO (EMBL%3B X15942) mini-circle transposase for IS117 (414 aa)%3Btransposase%2C pseudogene;gbkey=misc_feature;gene=SCJ33.10c
NC_003888.3	RefSeq	ribosome_entry_site	138965	138970	.	+	.	ID=id121;gbkey=RBS
NC_003888.3	RefSeq	gene	138976	139467	.	+	.	ID=gene134;Dbxref=GeneID:1095571;Name=SCJ33.11;gbkey=Gene;gene=SCJ33.11;gene_biotype=protein_coding;gene_synonym=SCJ33.11;locus_tag=SCO0147
NC_003888.3	RefSeq	CDS	138976	139467	.	+	0	ID=cds125;Parent=gene134;Dbxref=Genbank:NP_624484.1,GeneID:1095571;Name=NP_624484.1;Note=SCJ33.11%2C possible transmembrane transport protein%2C len: 163 aa. Weakly similar to several including: Aquifex aeolicus TR:O66755 (EMBL%3B AE000690) MG(2+) transport ATPase (225 aa)%2C fasta scores opt: 110 z-score: 142.5 E(): 1.4 26.7%25 identity in 146 aa overlap and Bacillus subtilis TR:O31833 (EMBL%3B Z99114) YoaS protein (160 aa)%2C fasta scores opt:109 z-score: 143.2 E(): 1.3 25.0%25 identity in 148 aa overlap. Contains a Prosite hit to PS00211 ABC transporters family signature and Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCJ33.11;product=transmembrane transport protein;protein_id=NP_624484.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	139294	139338	.	+	.	ID=id122;Dbxref=GeneID:1095571;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCJ33.11
NC_003888.3	RefSeq	gene	139467	139712	.	+	.	ID=gene135;Dbxref=GeneID:1095572;Name=SCJ33.12;gbkey=Gene;gene=SCJ33.12;gene_biotype=protein_coding;gene_synonym=SCJ33.12;locus_tag=SCO0148
NC_003888.3	RefSeq	CDS	139467	139712	.	+	0	ID=cds126;Parent=gene135;Dbxref=Genbank:NP_624485.1,GeneID:1095572;Name=NP_624485.1;Note=SCJ33.12%2C possible transcriptional regulatory protein%2C len: 81 aa. Highly similar to Bacillus subtilis TR:O31834 (EMBL:Z99114) YozG protein (84 aa)%2C fasta scores opt: 307 z-score: 443.1 E(): 2.6e-17 61.8%25 identity in 68 aa overlap. Contains a Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix which lies between residues 17..38 (+3.45 SD).;gbkey=CDS;gene=SCJ33.12;product=transcriptional regulator;protein_id=NP_624485.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	139485	139652	.	+	.	ID=id123;Dbxref=GeneID:1095572;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 34.50%2C E-value 2.4e-06;gbkey=misc_feature;gene=SCJ33.12
NC_003888.3	RefSeq	gene	139703	140299	.	-	.	ID=gene136;Dbxref=GeneID:1095573;Name=SCJ33.13c;gbkey=Gene;gene=SCJ33.13c;gene_biotype=protein_coding;gene_synonym=SCJ33.13c;locus_tag=SCO0149
NC_003888.3	RefSeq	CDS	139703	140299	.	-	0	ID=cds127;Parent=gene136;Dbxref=Genbank:NP_624486.1,GeneID:1095573;Name=NP_624486.1;Note=SCJ33.13c%2C unknown%2C len: 198 aa.;gbkey=CDS;gene=SCJ33.13c;product=hypothetical protein;protein_id=NP_624486.1;transl_table=11
NC_003888.3	RefSeq	gene	140368	140862	.	+	.	ID=gene137;Dbxref=GeneID:1095574;Name=SCJ33.14;gbkey=Gene;gene=SCJ33.14;gene_biotype=protein_coding;gene_synonym=SCJ33.14;locus_tag=SCO0150
NC_003888.3	RefSeq	CDS	140368	140862	.	+	0	ID=cds128;Parent=gene137;Dbxref=Genbank:NP_624487.1,GeneID:1095574;Name=NP_624487.1;Note=SCJ33.14%2C unknown%2C len: 164 aa;gbkey=CDS;gene=SCJ33.14;product=hypothetical protein;protein_id=NP_624487.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	141360	141363	.	+	.	ID=id124;gbkey=RBS
NC_003888.3	RefSeq	gene	141370	141708	.	+	.	ID=gene138;Dbxref=GeneID:1095575;Name=SCJ33.15;gbkey=Gene;gene=SCJ33.15;gene_biotype=protein_coding;gene_synonym=SCJ33.15;locus_tag=SCO0151
NC_003888.3	RefSeq	CDS	141370	141708	.	+	0	ID=cds129;Parent=gene138;Dbxref=Genbank:NP_624488.1,GeneID:1095575;Name=NP_624488.1;Note=SCJ33.15%2C possible integral membrane protein%2C len: 112 aa. Contains Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCJ33.15;product=hypothetical protein;protein_id=NP_624488.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	141695	141701	.	+	.	ID=id125;Dbxref=GeneID:1095575;gbkey=RBS;gene=SCJ33.15
NC_003888.3	RefSeq	gene	141705	143315	.	+	.	ID=gene139;Dbxref=GeneID:1095576;Name=SCJ1.01;gbkey=Gene;gene=SCJ1.01;gene_biotype=protein_coding;gene_synonym=SCJ1.01,SCJ33.16;locus_tag=SCO0152
NC_003888.3	RefSeq	CDS	141705	143315	.	+	0	ID=cds130;Parent=gene139;Dbxref=Genbank:NP_733492.1,GeneID:1095576;Name=NP_733492.1;Note=SCJ1.01%2C possible transmembrane transport protein%2C partial CDS%2C len: >284 aa%3B similar to S. coelicolor transmembrane transport protein SC5B8.17 TR:O70003 (EMBL: AL022374) (530 aa)%2C fasta scores%3B opt: 513 z-score: 549.9 E(): 2.9e-23 38.1%25 identity in 270 aa overlap%2C Rhodobacter capsulatus transmembrane protein TR:O68042(EMBL: AF010496)(578 aa)%2C fasta scores opt: 243 z-score: 263.6 E(): 2.5e-07 26.3%25 identity in 281 aa overlap and Pseudomonas putida TR:O50471 (EMBL%3B Z71176) phenylacetic acid permease (520 aa)%2C fasta scores opt: 233 z-score: 253.6 E(): 9.1e-07 31.1%25 identity in 293 aa overlap. Contains probable membrane spanning hydrophobic domains.~SCJ33.16%2C possible transmembrane transport protein%2C partial CDS%2C len: >288 aa. Similar to several including: Pseudomonas putida TR:O50471 (EMBL%3B Z71176) phenylacetic acid permease (520 aa)%2C fasta scores opt: 337 z-score: 380.9 E(): 7.5e-14 29.4%25 identity in 269 aa overlap and Streptomyces coelicolor TR:O70003 (EMBL%3B AL022374) transmembrane transport SC5B8.17 (530 aa)%2C fasta scores opt: 462 z-score: 520.1 E(): 1.3e-21 31.9%25 identity in 279 aa overlap. Overlaps with and extends into CDS SCJ1.01. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCJ1.01;product=transmembrane transport protein;protein_id=NP_733492.1;transl_table=11
NC_003888.3	RefSeq	gene	143776	144363	.	-	.	ID=gene140;Dbxref=GeneID:1095577;Name=SCJ1.02c;gbkey=Gene;gene=SCJ1.02c;gene_biotype=protein_coding;gene_synonym=SCJ1.02c;locus_tag=SCO0153
NC_003888.3	RefSeq	CDS	143776	144363	.	-	0	ID=cds131;Parent=gene140;Dbxref=Genbank:NP_624489.1,GeneID:1095577;Name=NP_624489.1;Note=SCJ1.02c%2C probable hypothetical protein%2C len: 195 aa%2C similar to Actinosynnema pretiosum auranticum hypothetical 20.0 KD protein TR:O69206 (EMBL:U33059) (190 aa)%2C fasta scores%2C opt: 524 z-score: 529.6 E(): 3.9e-22%3B 43.2%25 identity in 192 aa overlap. Contains a possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCJ1.02c;product=hypothetical protein;protein_id=NP_624489.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	144374	144379	.	-	.	ID=id126;gbkey=RBS
NC_003888.3	RefSeq	gene	144704	145366	.	-	.	ID=gene141;Dbxref=GeneID:1095578;Name=SCJ1.03c;gbkey=Gene;gene=SCJ1.03c;gene_biotype=protein_coding;gene_synonym=SCJ1.03c;locus_tag=SCO0154
NC_003888.3	RefSeq	CDS	144704	145366	.	-	0	ID=cds132;Parent=gene141;Dbxref=Genbank:NP_624490.1,GeneID:1095578;Name=NP_624490.1;Note=SCJ1.03c%2C unknown%2Clen:220 aa%2C similarity to Synechocystis sp. (strain PCC 6803) hypothetical 24.8 KD protein TR:P73776 (EMBL: D90909)(218 aa)%2C fasta scores opt: 291 z-score: 344.1 E(): 8.3e-12 31.2%25 identity in 170 aa overlap and a weakly similar to Pseudomonas fluorescens SW:TIPB_PSEFL (EMBL%3B U44827) thiol:disulfide interchange protein TipB precursor (cytochrome C biogenesis protein TipB) (178 aa)%2C fasta scores opt: 148 z-score: 181.8 E(): 0.0091 28.7%25 identity in 122 aa overlap.;gbkey=CDS;gene=SCJ1.03c;product=hypothetical protein;protein_id=NP_624490.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	145374	145377	.	-	.	ID=id127;gbkey=RBS
NC_003888.3	RefSeq	gene	145499	146122	.	+	.	ID=gene142;Dbxref=GeneID:1095579;Name=SCJ1.04;gbkey=Gene;gene=SCJ1.04;gene_biotype=protein_coding;gene_synonym=SCJ1.04;locus_tag=SCO0155
NC_003888.3	RefSeq	CDS	145499	146122	.	+	0	ID=cds133;Parent=gene142;Dbxref=Genbank:NP_624491.1,GeneID:1095579;Name=NP_624491.1;Note=SCJ1.04%2C possible tetR family transcriptional regulatory protein%2C len: 204 aa%2C similarity to several E.coli proteins including uid operon repressor (gus operon repressor) SW:UIDR_ECOLI (EMBL:M14641)( 196 aa)%2C fasta scores opt: 170 z-score: 212.8 E(): 0.00017 25.5%25identity in 184 aa overlap and the hypothetical transcriptional regulator SW:YDHM_ECOLI (EMBL: AE000260)(199 aa)%2C fasta scores opt: 176 z-score: 219.8 E(): 7e-05 27.6%25 identity in 185 aa overlap. In addition to Lactococcus lactis (subsp. lactis) hypothetical protein SW:YPB3_LACLA (EMBL: X60456) (196 aa)%2C fasta scores opt: 245 z-score: 301.6 E(): 1.9e-09 31.9%25 identity in 188 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SCJ1.04;product=transcriptional regulator;protein_id=NP_624491.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	145559	145702	.	+	.	ID=id128;Dbxref=GeneID:1095579;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 28.80%2C E-value 3e-06;gbkey=misc_feature;gene=SCJ1.04
NC_003888.3	RefSeq	gene	146034	146351	.	-	.	ID=gene143;Dbxref=GeneID:1095580;Name=SCJ1.05c;gbkey=Gene;gene=SCJ1.05c;gene_biotype=protein_coding;gene_synonym=SCJ1.05c;locus_tag=SCO0156
NC_003888.3	RefSeq	CDS	146034	146351	.	-	0	ID=cds134;Parent=gene143;Dbxref=Genbank:NP_624492.1,GeneID:1095580;Name=NP_624492.1;Note=SCJ1.05c%2C doubtful CDS%2C len: 125 aa;gbkey=CDS;gene=SCJ1.05c;product=hypothetical protein;protein_id=NP_624492.1;transl_table=11
NC_003888.3	RefSeq	gene	146603	146980	.	+	.	ID=gene144;Dbxref=GeneID:1095581;Name=SCJ1.06;gbkey=Gene;gene=SCJ1.06;gene_biotype=protein_coding;gene_synonym=SCJ1.06;locus_tag=SCO0157
NC_003888.3	RefSeq	CDS	146603	146980	.	+	0	ID=cds135;Parent=gene144;Dbxref=Genbank:NP_624493.1,GeneID:1095581;Name=NP_624493.1;Note=SCJ1.06%2C doubtful CDS%2C len: 125 aa;gbkey=CDS;gene=SCJ1.06;product=hypothetical protein;protein_id=NP_624493.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	146966	146970	.	+	.	ID=id129;Dbxref=GeneID:1095581;gbkey=RBS;gene=SCJ1.06
NC_003888.3	RefSeq	gene	146977	148206	.	+	.	ID=gene145;Dbxref=GeneID:1095582;Name=SCJ1.07;gbkey=Gene;gene=SCJ1.07;gene_biotype=protein_coding;gene_synonym=SCJ1.07;locus_tag=SCO0158
NC_003888.3	RefSeq	CDS	146977	148206	.	+	0	ID=cds136;Parent=gene145;Dbxref=Genbank:NP_624494.1,GeneID:1095582;Name=NP_624494.1;Note=SCJ1.07%2C probable oxidoreductase%2C len: 409 aa%3B similar to e.g. Synechocystis sp. (strain PCC 6803) TR:P73735 (EMBL:D90909) NADH dehydrogenase (404 aa)%2C fasta scores opt: 358 z-score: 399.1 E(): 7.1e-15 28.9%25 identity in 353 aa overlap and Rhodococcus globerulus TR:Q57031(EMBL:X80041) ferredoxin reductase BPH (412 aa)%2C fasta scores opt:294 z-score: 328.8 E(): 5.9e-11 31.3%25 identity in 358 aa overlap;gbkey=CDS;gene=SCJ1.07;product=oxidoreductase;protein_id=NP_624494.1;transl_table=11
NC_003888.3	RefSeq	gene	148216	149184	.	+	.	ID=gene146;Dbxref=GeneID:1095583;Name=SCJ1.08;gbkey=Gene;gene=SCJ1.08;gene_biotype=protein_coding;gene_synonym=SCJ1.08;locus_tag=SCO0159
NC_003888.3	RefSeq	CDS	148216	149184	.	+	0	ID=cds137;Parent=gene146;Dbxref=Genbank:NP_624495.1,GeneID:1095583;Name=NP_624495.1;Note=SCJ1.08 ECF sigma factor%2C len: 322 aa%2C similar to many e.g. S. coelicolor TR:CAB44418 (EMBL:AL078610) ECF sigma factor SCH35.09 (223 aa) fasta scores%2C opt: 656 z-score: 777.0 E(): 0 64.6%25 identity in 175 aa overlap and Mycobacterium tuberculosis SIGI protein TR:O50445 (EMBL%3B AL010186)(290 aa)%2C fasta scores opt: 385 z-score: 458.0 E(): 3.7e-18 30.0%25 identity in 290 aa overlap. Contains a Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily). Possible helix-turn-helix motif between 142-163 aa%2C score +4.11 SD;gbkey=CDS;gene=SCJ1.08;product=ECF sigma factor;protein_id=NP_624495.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	148291	148488	.	+	.	ID=id130;Dbxref=GeneID:1095583;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 27.40%2C E-value 6.5e-05;gbkey=misc_feature;gene=SCJ1.08
NC_003888.3	RefSeq	gene	149508	150209	.	-	.	ID=gene147;Dbxref=GeneID:1095584;Name=SCJ1.09c;gbkey=Gene;gene=SCJ1.09c;gene_biotype=protein_coding;gene_synonym=SCJ1.09c;locus_tag=SCO0160
NC_003888.3	RefSeq	CDS	149508	150209	.	-	0	ID=cds138;Parent=gene147;Dbxref=Genbank:NP_624496.1,GeneID:1095584;Name=NP_624496.1;Note=SCJ1.09c%2C possible DNA-binding protein%2C len: 195 aa%2C similarity to Mycobacterium tuberculosis TR:O53625 (EMBL%3B AL021428) hypothetical 16.6 KD protein (152 aa)%2C fasta scores opt: 182 z-score: 220.8 E(): 6.1e-05 34.2%25 identity in 155 aa overlap and Mycobacterium tuberculosis TR:O05803 (EMBL%3B Z95150) hypothetical 12.3 KD protein (110 aa)%2C fasta scores opt: 142 z-score: 177.2 E(): 0.016 34.8%25 identity in 89 aa overlap. Contains a Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and a possible helix-turn-helix motif at residues 34..55 (+3.91 SD);gbkey=CDS;gene=SCJ1.09c;product=DNA-binding protein;protein_id=NP_624496.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	149973	150137	.	-	.	ID=id131;Dbxref=GeneID:1095584;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 36.00%2C E-value 8.3e-07;gbkey=misc_feature;gene=SCJ1.09c
NC_003888.3	RefSeq	gene	150181	150525	.	-	.	ID=gene148;Dbxref=GeneID:1095585;Name=SCJ1.10c;gbkey=Gene;gene=SCJ1.10c;gene_biotype=protein_coding;gene_synonym=SCJ1.10c;locus_tag=SCO0161
NC_003888.3	RefSeq	CDS	150181	150525	.	-	0	ID=cds139;Parent=gene148;Dbxref=Genbank:NP_624497.1,GeneID:1095585;Name=NP_624497.1;Note=SCJ1.10c%2C doubtful CDS%2C len:124 aa.;gbkey=CDS;gene=SCJ1.10c;product=hypothetical protein;protein_id=NP_624497.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	150219	150225	.	-	.	ID=id132;Dbxref=GeneID:1095585;gbkey=RBS;gene=SCJ1.10c
NC_003888.3	RefSeq	ribosome_entry_site	150530	150535	.	-	.	ID=id133;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	150568	150573	.	+	.	ID=id134;gbkey=RBS
NC_003888.3	RefSeq	gene	150579	151571	.	+	.	ID=gene149;Dbxref=GeneID:1095586;Name=SCJ1.11;gbkey=Gene;gene=SCJ1.11;gene_biotype=protein_coding;gene_synonym=SCJ1.11;locus_tag=SCO0162
NC_003888.3	RefSeq	CDS	150579	151571	.	+	0	ID=cds140;Parent=gene149;Dbxref=Genbank:NP_624498.1,GeneID:1095586;Name=NP_624498.1;Note=SCJ1.11%2C unknown%2C similar to several including: Mycobacterium tuberculosis TR:O53476(EMBL%3B AL021899) hypothetical 36.6 KD protein (331 aa)%2C fasta scores opt: 394 z-score: 468.4 E(): 1e-18 32.2%25 identity in 332 aa overlap and Mycobacterium tuberculosis TR:O05800 (EMBL%3B Z95150) hypothetical 38.5 KD protein (344 aa)%2C fasta scores opt: 345 z-score: 410.5 E(): 1.7e-15 30.2%25 identity in 324 aa overlap.;gbkey=CDS;gene=SCJ1.11;product=hypothetical protein;protein_id=NP_624498.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	151738	151742	.	+	.	ID=id135;gbkey=RBS
NC_003888.3	RefSeq	gene	151749	153275	.	+	.	ID=gene150;Dbxref=GeneID:1095587;Name=SCJ1.12;gbkey=Gene;gene=SCJ1.12;gene_biotype=protein_coding;gene_synonym=SCJ1.12;locus_tag=SCO0163
NC_003888.3	RefSeq	CDS	151749	153275	.	+	0	ID=cds141;Parent=gene150;Dbxref=Genbank:NP_624499.1,GeneID:1095587;Name=NP_624499.1;Note=SCJ1.12 unkown%2C len: 508 aa%2C similar to Mycobacterium tuberculosis SW:YW13_MYCTU (EMBL%3B Z74025) hypothetical 54.4 KD protein CY39.13 (498 aa)%2Cfasta scores opt: 1192 z-score: 1332.4 E(): 0 43.8%25 identity in 470 aa overlap and Aquifex aeolicus TR:O66641 (EMBL: AE000682) hypothetical 38.3 KD protein (322 aa)%2C fasta scores opt: 550 z-score: 618.7 E(): 4.2e-27 35.5%25 identity in 279 aa overlap. Contains a PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCJ1.12;product=hypothetical protein;protein_id=NP_624499.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	152718	152741	.	+	.	ID=id136;Dbxref=GeneID:1095587;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCJ1.12
NC_003888.3	RefSeq	ribosome_entry_site	153389	153393	.	+	.	ID=id137;gbkey=RBS
NC_003888.3	RefSeq	gene	153398	155728	.	+	.	ID=gene151;Dbxref=GeneID:1095588;Name=SCJ1.13;gbkey=Gene;gene=SCJ1.13;gene_biotype=protein_coding;gene_synonym=SCJ1.13;locus_tag=SCO0164
NC_003888.3	RefSeq	CDS	153398	155728	.	+	0	ID=cds142;Parent=gene151;Dbxref=Genbank:NP_624500.1,GeneID:1095588;Name=NP_624500.1;Note=SCJ1.13%2C cation-transporting ATPase%2C len: 776 aa%2C similar to many including: Mycobacterium tuberculosis SW:CTPG_MYCTU (EMBL:Z74025) probable cation-transporting ATPase G (771 aa)%2C fasta scores opt: 1050 z-score: 1095.0 E(): 0 37.6%25 identity in 588 aa overlap%2C Mycobacterium tuberculosis TR:O66027 (EMBL:U82820)(EMBL metal-transporting ATPase MTA72 (680 aa)%2C fasta scores opt: 1036 z-score: 1081.2 E(): 0 33.8%25 identity in 577 aa overlap and Helicobacter felis SW:COPA_HELFE (EMBL: AJ001932) copper-transporting ATPase (EC 3.6.1.36) (732 aa)%2C fasta scores opt: 904 z-score: 943.3 E(): 0%2C 33.1%25 identity in 547 aa overlap.Contains possible membrane spanning hydrophobic domains%2C a Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPases and a PS00154 E1-E2 ATPases phosphorylation site.;gbkey=CDS;gene=SCJ1.13;product=cation-transporting ATPase;protein_id=NP_624500.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	153698	155089	.	+	.	ID=id138;Dbxref=GeneID:1095588;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPases%2C score 294.10%2C E-value 1.7e-84;gbkey=misc_feature;gene=SCJ1.13
NC_003888.3	RefSeq	sequence_feature	154364	154384	.	+	.	ID=id139;Dbxref=GeneID:1095588;Note=PS00154 E1-E2 ATPases phosphorylation site;gbkey=misc_feature;gene=SCJ1.13
NC_003888.3	RefSeq	gene	155707	156120	.	-	.	ID=gene152;Dbxref=GeneID:1095589;Name=SCJ1.14c;gbkey=Gene;gene=SCJ1.14c;gene_biotype=protein_coding;gene_synonym=SCJ1.14c;locus_tag=SCO0165
NC_003888.3	RefSeq	CDS	155707	156120	.	-	0	ID=cds143;Parent=gene152;Dbxref=Genbank:NP_624501.1,GeneID:1095589;Name=NP_624501.1;Note=SCJ1.14c%2C unknown%2C len:137 aa%2C shares a low level of similarity with Aquifex aeolicus TR:O66857 (EMBL:AE000697) hypothetical 14.5 KD protein (130 aa)%2C fasta scores opt:144 z-score: 190.2 E(): 0.003127.2%25 identity in 103 aa overlap. Contains a PS00216 Sugar transport proteins signature 1.;gbkey=CDS;gene=SCJ1.14c;product=hypothetical protein;protein_id=NP_624501.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	155743	155796	.	-	.	ID=id140;Dbxref=GeneID:1095589;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCJ1.14c
NC_003888.3	RefSeq	ribosome_entry_site	156328	156333	.	+	.	ID=id141;gbkey=RBS
NC_003888.3	RefSeq	gene	156338	157141	.	+	.	ID=gene153;Dbxref=GeneID:1095590;Name=SCJ1.15;gbkey=Gene;gene=SCJ1.15;gene_biotype=protein_coding;gene_synonym=SCJ1.15;locus_tag=SCO0166
NC_003888.3	RefSeq	CDS	156338	157141	.	+	0	ID=cds144;Parent=gene153;Dbxref=Genbank:NP_624502.1,GeneID:1095590;Name=NP_624502.1;Note=SCJ1.15%2C possible regulator%2C len: 267 aa%2C highly similar to Pseudomonas aeruginosa substrain OT684 TR:P72119 (EMBL:U12891) pyoverdine gene transcriptional regulator PvdS (237 aa)%2C fasta scores opt: 1040 z-score: 1209.8 E(): 0 60.4%25 identity in 235 aa overlap and Mycobacterium tuberculosis TR:O05877 (EMBL%3B Z95121) hypothetical 34.1 KD protein MTCY20B11.07C (295 aa) fasta scores opt: 1189 z-score: 1380.2 E(): 0 65.6%25 identity in 262 aa overlap.;gbkey=CDS;gene=SCJ1.15;product=regulator;protein_id=NP_624502.1;transl_table=11
NC_003888.3	RefSeq	gene	157189	158073	.	-	.	ID=gene154;Dbxref=GeneID:1095591;Name=SCJ1.16c;gbkey=Gene;gene=SCJ1.16c;gene_biotype=protein_coding;gene_synonym=SCJ1.16c;locus_tag=SCO0167
NC_003888.3	RefSeq	CDS	157189	158073	.	-	0	ID=cds145;Parent=gene154;Dbxref=Genbank:NP_624503.1,GeneID:1095591;Name=NP_624503.1;Note=SCJ1.16c%2C unknown%2C len: 294 aa%2C similar to many including: Mycobacterium tuberculosis TR:O06189 (EMBL%3B Z95387)hypothetical 31.7 KD protein MTCY1A10.09C (297 aa)%2C fasta scores opt: 407 z-score: 484.5 E(): 1.3e-19 32.7%25 identity in 303 aa overlap and Mycobacterium tuberculosis SW:YW12_MYCTU (EMBL%3B Z74025) hypothetical 30.9 KD protein MTCY39.12 (295 aa)%2C fasta scores opt: 401 z-score: 477.5 E(): 3.1e-19 34.7%25 identity in 294 aa overlap. Also similar to S. coelicolor SCJ1.29c (283 aa)%2C fasta scores opt: 806 z-score: 761.9 E(): 0 46.4%25 identity in 295 aa overlap. Contains a Pfam match to entry PF00582 Usp%2C Universal stress protein family.;gbkey=CDS;gene=SCJ1.16c;product=hypothetical protein;protein_id=NP_624503.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	157204	157524	.	-	.	ID=id142;Dbxref=GeneID:1095591;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 26.40%2C E-value 0.00012;gbkey=misc_feature;gene=SCJ1.16c
NC_003888.3	RefSeq	gene	158732	159304	.	+	.	ID=gene155;Dbxref=GeneID:1095592;Name=SCJ1.17;gbkey=Gene;gene=SCJ1.17;gene_biotype=protein_coding;gene_synonym=SCJ1.17;locus_tag=SCO0168
NC_003888.3	RefSeq	CDS	158732	159304	.	+	0	ID=cds146;Parent=gene155;Dbxref=Genbank:NP_624504.1,GeneID:1095592;Name=NP_624504.1;Note=SCJ1.17%2C possible regulator%2C len: 190 aa%2C similar to Mycobacterium tuberculosis TR:O69644 (EMBL%3B AL022121)  transcriptional regulator MTV025.024 (224 aa)%2C fasta scores opt: 199 z-score: 254.8 E(): 7.8e-07 31.5%25 identity in 124 aa overlap. Contains a Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain.;gbkey=CDS;gene=SCJ1.17;product=regulator protein;protein_id=NP_624504.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	158909	159190	.	+	.	ID=id143;Dbxref=GeneID:1095592;Note=Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain%2C score 27.50%2C E-value 0.0003;gbkey=misc_feature;gene=SCJ1.17
NC_003888.3	RefSeq	repeat_region	159366	159977	.	+	.	ID=id144;Note=This repeat unit encodes SCJ1.18 and is 67%25 identical to the repeated region complement(17965..18576).;gbkey=repeat_region
NC_003888.3	RefSeq	gene	159372	160025	.	+	.	ID=gene156;Dbxref=GeneID:1095593;Name=SCJ1.18;gbkey=Gene;gene=SCJ1.18;gene_biotype=protein_coding;gene_synonym=SCJ1.18;locus_tag=SCO0169
NC_003888.3	RefSeq	CDS	159372	160025	.	+	0	ID=cds147;Parent=gene156;Dbxref=Genbank:NP_624505.1,GeneID:1095593;Name=NP_624505.1;Note=SCJ1.18%2C conserved hypothetical protein%2C len: 217 aa. Duplication of DNA region complement(17965..18576). Similar to many hypothetical proteins including: Thermotoga maritima TR:AAD36216 (EMBL%3B AE001771) conserved hypothetical protein (215 aa)%2C fasta scores opt: 239 z-score: 287.3 E(): 1.2e-08 29.1%25 identity in 175 aa overlap and S. coelicolor SCJ1.19c (223 aa)%2C fasta scores opt: 711 z-score: 702.0 E(): 7.1e-34 56.7%25 identity in 215 aa overlap.Contains 2xPfam match to entry PF00571 CBS%2C CBS domains.;gbkey=CDS;gene=SCJ1.18;product=hypothetical protein;protein_id=NP_624505.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	159372	159527	.	+	.	ID=id145;Dbxref=GeneID:1095593;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 18.40%2C E-value 0.17;gbkey=misc_feature;gene=SCJ1.18
NC_003888.3	RefSeq	sequence_feature	159609	159770	.	+	.	ID=id146;Dbxref=GeneID:1095593;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 53.50%2C E-value 4.8e-12;gbkey=misc_feature;gene=SCJ1.18
NC_003888.3	RefSeq	gene	160356	161027	.	-	.	ID=gene157;Dbxref=GeneID:1095594;Name=SCJ1.19c;gbkey=Gene;gene=SCJ1.19c;gene_biotype=protein_coding;gene_synonym=SCJ1.19c;locus_tag=SCO0170
NC_003888.3	RefSeq	CDS	160356	161027	.	-	0	ID=cds148;Parent=gene157;Dbxref=Genbank:NP_624506.1,GeneID:1095594;Name=NP_624506.1;Note=SCJ1.19c%2C conserved hypothetical protein%2C len: 223 aa. Duplication of DNA region 16907..17518. Similar to many hypothetical proteins including: Thermotoga maritima TR:AAD36216 (EMBL%3B AE001771) conserved hypothetical protein (215 aa)%2C fasta scores opt: 204 z-score: 245.5 E(): 2.6e-06 29.3%25 identity in 133 aa overlap and S. coelicolor SCJ1.18 (217 aa)%2C fasta scores opt: 711 z-score: 712.7 E(): 1.8e-34 56.7%25 identity in 215 aa overlap. Contains 2x Pfam match to entry PF00571 CBS%2C CBS domains;gbkey=CDS;gene=SCJ1.19c;product=hypothetical protein;protein_id=NP_624506.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	160424	161035	.	-	.	ID=id147;Note=This repeat unit encodes SCJ1.19c and is 67%25 identical to the repeated region 16907..17518.;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	160629	160790	.	-	.	ID=id148;Dbxref=GeneID:1095594;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 54.10%2C E-value 3.1e-12;gbkey=misc_feature;gene=SCJ1.19c
NC_003888.3	RefSeq	sequence_feature	160872	161027	.	-	.	ID=id149;Dbxref=GeneID:1095594;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 25.80%2C E-value 0.001;gbkey=misc_feature;gene=SCJ1.19c
NC_003888.3	RefSeq	gene	161237	162553	.	+	.	ID=gene158;Dbxref=GeneID:1095595;Name=SCJ1.20;gbkey=Gene;gene=SCJ1.20;gene_biotype=protein_coding;gene_synonym=SCJ1.20;locus_tag=SCO0171
NC_003888.3	RefSeq	CDS	161237	162553	.	+	0	ID=cds149;Parent=gene158;Dbxref=Genbank:NP_624507.1,GeneID:1095595;Name=NP_624507.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;gene=SCJ1.20;product=nicotinate phosphoribosyltransferase;protein_id=NP_624507.1;transl_table=11
NC_003888.3	RefSeq	gene	162661	163119	.	+	.	ID=gene159;Dbxref=GeneID:1095596;Name=SCJ1.21;gbkey=Gene;gene=SCJ1.21;gene_biotype=protein_coding;gene_synonym=SCJ1.21;locus_tag=SCO0172
NC_003888.3	RefSeq	CDS	162661	163119	.	+	0	ID=cds150;Parent=gene159;Dbxref=Genbank:NP_624508.1,GeneID:1095596;Name=NP_624508.1;Note=SCJ1.21%2C hypothetical protein%2C len: 152 aa. Similar to many hypothetical proteins including: Mycobacterium tuberculosis TR:O53472 (EMBL%3B AL021899) hypothetical 31.5 KD protein MTV018.13C (294 aa)%2C fasta scores opt: 248 z-score: 298.8 E(): 2.8e-09 35.6%25 identity in 160 aa overlap and Methanobacterium thermoautotrophicum TR:O27074 (EMBL%3B AE000872) conserved protein (143 aa)%2C fasta scores opt: 195 z-score: 241.7 E(): 4.2e-06 32.4%25 identity in 142 aa overlap. Contains a Pfam match to entry PF00582 Usp%2C Universal stress protein family.;gbkey=CDS;gene=SCJ1.21;product=hypothetical protein;protein_id=NP_624508.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	162775	163086	.	+	.	ID=id150;Dbxref=GeneID:1095596;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 55.10%2C E-value 1.6e-12;gbkey=misc_feature;gene=SCJ1.21
NC_003888.3	RefSeq	gene	163235	164017	.	-	.	ID=gene160;Dbxref=GeneID:1095597;Name=SCJ1.22c;gbkey=Gene;gene=SCJ1.22c;gene_biotype=protein_coding;gene_synonym=SCJ1.22c;locus_tag=SCO0173
NC_003888.3	RefSeq	CDS	163235	164017	.	-	0	ID=cds151;Parent=gene160;Dbxref=Genbank:NP_624509.1,GeneID:1095597;Name=NP_624509.1;Note=SCJ1.22c%2C unkown%2C len: 260 aa.;gbkey=CDS;gene=SCJ1.22c;product=hypothetical protein;protein_id=NP_624509.1;transl_table=11
NC_003888.3	RefSeq	gene	164023	164994	.	-	.	ID=gene161;Dbxref=GeneID:1095598;Name=SCJ1.23c;gbkey=Gene;gene=SCJ1.23c;gene_biotype=protein_coding;gene_synonym=SCJ1.23c;locus_tag=SCO0174
NC_003888.3	RefSeq	CDS	164023	164994	.	-	0	ID=cds152;Parent=gene161;Dbxref=Genbank:NP_624510.1,GeneID:1095598;Name=NP_624510.1;Note=SCJ1.23c%2C possible DNA-binding protein%2C len: 323 aa. Similar in parts to many%2C e.g. Mycobacterium tuberculosis TR:O53625 (EMBL%3B AL021428) hypothetical 16.6 KD protein MTV030.24 (152 aa)%2C fasta scores opt: 224 z-score: 258.5 E(): 4.9e-07 34.3%25 identity in 134 aa overlap and Mycobacterium tuberculosis SW:YU07_MYCTU (EMBL%3B Z77163) hypothetical 8.6 KD protein MTCY339.07C (80 aa)%2C fasta scores opt: 182 z-score: 216.4 E(): 0.00011 42.3%25 identity in 71 aa overlap. Also similar to TR:Q9RJ05 (EMBL:AL109962) Streptomyces coelicolor possible DNA-binding protein SCJ1.09c%2C 233 aa%3B fasta scores: opt: 516 Z-score: 566.6 E(): 6.3e-24%3B 37.615%25 identity in 218 aa overlap. Contains a Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and a possible helix-turn-helix motif at residues 127..148 (+2.82 SD);gbkey=CDS;gene=SCJ1.23c;product=DNA-binding protein;protein_id=NP_624510.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	164479	164643	.	-	.	ID=id151;Dbxref=GeneID:1095598;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 39.60%2C E-value 7.1e-08;gbkey=misc_feature;gene=SCJ1.23c
NC_003888.3	RefSeq	gene	165059	165406	.	-	.	ID=gene162;Dbxref=GeneID:1095599;Name=SCJ1.24c;gbkey=Gene;gene=SCJ1.24c;gene_biotype=protein_coding;gene_synonym=SCJ1.24c;locus_tag=SCO0175
NC_003888.3	RefSeq	CDS	165059	165406	.	-	0	ID=cds153;Parent=gene162;Dbxref=Genbank:NP_624511.1,GeneID:1095599;Name=NP_624511.1;Note=SCJ1.24c%2C unknown%2C len: 115 aa.;gbkey=CDS;gene=SCJ1.24c;product=hypothetical protein;protein_id=NP_624511.1;transl_table=11
NC_003888.3	RefSeq	gene	165460	165855	.	+	.	ID=gene163;Dbxref=GeneID:1095600;Name=SCJ1.25;gbkey=Gene;gene=SCJ1.25;gene_biotype=protein_coding;gene_synonym=SCJ1.25;locus_tag=SCO0176
NC_003888.3	RefSeq	CDS	165460	165855	.	+	0	ID=cds154;Parent=gene163;Dbxref=Genbank:NP_624512.1,GeneID:1095600;Name=NP_624512.1;Note=SCJ1.25%2C unknown%2C len: 131 aa.;gbkey=CDS;gene=SCJ1.25;product=hypothetical protein;protein_id=NP_624512.1;transl_table=11
NC_003888.3	RefSeq	gene	166033	166614	.	+	.	ID=gene164;Dbxref=GeneID:1095601;Name=SCJ1.26;gbkey=Gene;gene=SCJ1.26;gene_biotype=protein_coding;gene_synonym=SCJ1.26;locus_tag=SCO0177
NC_003888.3	RefSeq	CDS	166033	166614	.	+	0	ID=cds155;Parent=gene164;Dbxref=Genbank:NP_624513.1,GeneID:1095601;Name=NP_624513.1;Note=SCJ1.26%2C possible membrane protein%2C len: 193 aa. Similar to Mycobacterium tuberculosis TR:P71991(EMBL%3B Z81360) hypothetical 22.5 KD protein (210 aa)%2C fasta scores opt: 287 z-score: 333.1 E(): 3.4e-11 35.2%25 identity in 182 aa overlap and S. coelicolor TR:Q9ZBP2 (EMBL%3BAL034492) 50KD proline rich protein (456 aa)%2C fasta scores opt: 338 z-score: 385.2 E(): 4.3e-14 35.6%25 identity in 188 aa overlap. Contains possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCJ1.26;product=hypothetical protein;protein_id=NP_624513.1;transl_table=11
NC_003888.3	RefSeq	gene	166891	167337	.	+	.	ID=gene165;Dbxref=GeneID:1095602;Name=SCJ1.27;gbkey=Gene;gene=SCJ1.27;gene_biotype=protein_coding;gene_synonym=SCJ1.27;locus_tag=SCO0178
NC_003888.3	RefSeq	CDS	166891	167337	.	+	0	ID=cds156;Parent=gene165;Dbxref=Genbank:NP_624514.1,GeneID:1095602;Name=NP_624514.1;Note=SCJ1.27%2C unknown%2C len: 148 aa. Weak similarity to Mycobacterium tuberculosis SW:YW23_MYCTU (EMBL%3B Z74025) hypothetical 33.9 KD protein MTCY39.23C (317 aa)%2C fasta scores opt: 201 z-score: 231.7 E(): 1.5e-05 33.1%25 identity in 136 aa overlap and Mycobacterium tuberculosis TR:O06189 (EMBL%3B Z95387)hypothetical 31.7 KD protein MTCY1A10.09C (297 aa)%2C fasta scores opt: 199 z-score: 229.8 E(): 1.9e-05 33.3%25 identity in 153 aa overlap.;gbkey=CDS;gene=SCJ1.27;product=hypothetical protein;protein_id=NP_624514.1;transl_table=11
NC_003888.3	RefSeq	gene	167444	168514	.	-	.	ID=gene166;Dbxref=GeneID:1095603;Name=SCJ1.28c;gbkey=Gene;gene=SCJ1.28c;gene_biotype=protein_coding;gene_synonym=SCJ1.28c;locus_tag=SCO0179
NC_003888.3	RefSeq	CDS	167444	168514	.	-	0	ID=cds157;Parent=gene166;Dbxref=Genbank:NP_624515.1,GeneID:1095603;Name=NP_624515.1;Note=SCJ1.28c%2Cpossible zinc-containing dehydrogenase%2C len: 356 aa. Similar to many including: Thermoanaerobacter brockii SW:ADH_THEBR (EMBL%3B X64841) NADP-dependent alcohol dehydrogenase (EC 1.1.1.2) (352 aa)%2C fasta scores opt: 556 z-score: 601.1 E(): 4e-26 33.7%25 identity in 338 aa overlap and Halobacterium volcanii TR:O34179 (EMBL%3B U95372) dehydrogenase (389 aa)%2C fasta scores opt: 715 z-score: 770.1 E(): 0 37.0%25 identity in 351 aa overlap. Contains a Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and a PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=CDS;gene=SCJ1.28c;product=zinc-containing dehydrogenase;protein_id=NP_624515.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	167483	168487	.	-	.	ID=id152;Dbxref=GeneID:1095603;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 236.60%2C E-value 3.4e-67;gbkey=misc_feature;gene=SCJ1.28c
NC_003888.3	RefSeq	sequence_feature	168296	168340	.	-	.	ID=id153;Dbxref=GeneID:1095603;Note=PS00059 Zinc-containing alcohol dehydrogenases signature%2C GHE.{2}G.{5}[GA].{2}[IVSAC]%2C info count %3D 21.8;gbkey=misc_feature;gene=SCJ1.28c
NC_003888.3	RefSeq	ribosome_entry_site	168528	168533	.	-	.	ID=id154;gbkey=RBS
NC_003888.3	RefSeq	gene	168705	169556	.	-	.	ID=gene167;Dbxref=GeneID:1095604;Name=SCJ1.29c;gbkey=Gene;gene=SCJ1.29c;gene_biotype=protein_coding;gene_synonym=SCJ1.29c;locus_tag=SCO0180
NC_003888.3	RefSeq	CDS	168705	169556	.	-	0	ID=cds158;Parent=gene167;Dbxref=Genbank:NP_624516.1,GeneID:1095604;Name=NP_624516.1;Note=SCJ1.29c%2C unknown%2C len: 283 aa. Similar to many including: Mycobacterium tuberculosis TR:O53472 (EMBL%3B AL021899) hypothetical 31.5 KD protein (294 aa)%2C fasta scores opt: 329 z-score: 389.0 E(): 2.6e-14 32.1%25 identity in 293 aa overlap and Mycobacterium tuberculosis TR:O06189 (EMBL%3B Z95387) hypothetical 31.7 KD protein (297 aa)%2C fasta scores opt: 330 z-score: 390.1 E(): 2.3e-14 31.8%25 identity in 296 aa overlap. Also similar to S. coelicolor SCJ1.16c (294 aa)%2C fasta scores opt: 806 z-score: 748.1 E():0 46.1%25 identity in 295 aa overlap. Contains a Pfam match to entry PF00582 Usp%2C Universal stress protein family;gbkey=CDS;gene=SCJ1.29c;product=hypothetical protein;protein_id=NP_624516.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	169143	169481	.	-	.	ID=id155;Dbxref=GeneID:1095604;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 34.80%2C E-value 2e-06;gbkey=misc_feature;gene=SCJ1.29c
NC_003888.3	RefSeq	ribosome_entry_site	169563	169570	.	-	.	ID=id156;gbkey=RBS
NC_003888.3	RefSeq	gene	169584	170570	.	-	.	ID=gene168;Dbxref=GeneID:1095605;Name=SCJ1.30c;gbkey=Gene;gene=SCJ1.30c;gene_biotype=protein_coding;gene_synonym=SCJ1.30c;locus_tag=SCO0181
NC_003888.3	RefSeq	CDS	169584	170570	.	-	0	ID=cds159;Parent=gene168;Dbxref=Genbank:NP_624517.1,GeneID:1095605;Name=NP_624517.1;Note=SCJ1.30c%2C unknown%2C len: 328 aa. Similar to many including: Mycobacterium tuberculosis SW:YW23_MYCTU (EMBL%3B Z74025) hypothetical 33.9 KD protein MTCY39.23C (317 aa) fasta scores opt: 382 z-score: 439.2 E(): 4.2e-17 32.6%25 identity in 319 aa overlap and Mycobacterium tuberculosis TR:O53472 (EMBL%3B AL021899) hypothetical 31.5 KD protein (294 aa)%2C fasta scores opt: 382 z-score: 439.2 E(): 4.2e-17 32.6%25 identity in 319 aa overlap. Contains a Pfam match to entry PF00582 Usp%2C Universal stress protein family.;gbkey=CDS;gene=SCJ1.30c;product=hypothetical protein;protein_id=NP_624517.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	169596	169919	.	-	.	ID=id157;Dbxref=GeneID:1095605;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 42.80%2C E-value 7.5e-09;gbkey=misc_feature;gene=SCJ1.30c
NC_003888.3	RefSeq	gene	170656	170880	.	-	.	ID=gene169;Dbxref=GeneID:1095606;Name=SCJ1.31c;gbkey=Gene;gene=SCJ1.31c;gene_biotype=protein_coding;gene_synonym=SCJ1.31c;locus_tag=SCO0182
NC_003888.3	RefSeq	CDS	170656	170880	.	-	0	ID=cds160;Parent=gene169;Dbxref=Genbank:NP_624518.1,GeneID:1095606;Name=NP_624518.1;Note=SCJ1.31c%2C doubtful CDS%2C len: 74 aa. Contains a TTA/leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SCJ1.31c;product=hypothetical protein;protein_id=NP_624518.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	170806	170808	.	-	.	ID=id158;Dbxref=GeneID:1095606;Note=TTA/leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCJ1.31c
NC_003888.3	RefSeq	gene	170911	172158	.	+	.	ID=gene170;Dbxref=GeneID:1095607;Name=SCJ1.32;gbkey=Gene;gene=SCJ1.32;gene_biotype=protein_coding;gene_synonym=SCJ1.32;locus_tag=SCO0183
NC_003888.3	RefSeq	CDS	170911	172158	.	+	0	ID=cds161;Parent=gene170;Dbxref=Genbank:NP_624519.1,GeneID:1095607;Name=NP_624519.1;Note=SCJ1.32%2C unknown%2Clen: 415 aa. Likely to have arisen as a result of a duplication of SCF43A.31/32%2C followed by a deletion event generating a possible CDS with the 5' coding sequence of SCF43A.31 and the 3' coding sequence of SCF43A.32. Similarity scores are as follows: to Streptomyces coelicolor TR:CAB48918 (EMBL%3B AL096837) oxidoreductase SCF43A.31 (520 aa)%2C fasta scores opt: 1191 z-score: 1365.3 E(): 0 64.2%25 identity in 307 aa overlap and to Streptomyces coelicolor TR:CAB48919(EMBL%3B AL096837) deoxyribodipyrimidine photolyase SCF43A.32 (458 aa)%2C opt: 909 z-score: 1043.2 E(): 0 45.7%25 identity in 418 aa overlap. Contains a PS00394 DNA photolyases class 1 signature 1 and a PS00691 DNA photolyases class 1 signature 2.;gbkey=CDS;gene=SCJ1.32;product=deoxiribopirymidine photolyase;protein_id=NP_624519.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	171718	171756	.	+	.	ID=id159;Dbxref=GeneID:1095607;Note=PS00394 DNA photolyases class 1 signature 1;gbkey=misc_feature;gene=SCJ1.32
NC_003888.3	RefSeq	sequence_feature	171778	171837	.	+	.	ID=id160;Dbxref=GeneID:1095607;Note=PS00691 DNA photolyases class 1 signature 2;gbkey=misc_feature;gene=SCJ1.32
NC_003888.3	RefSeq	gene	172170	173984	.	+	.	ID=gene171;Dbxref=GeneID:1095608;Name=SCJ1.33;gbkey=Gene;gene=SCJ1.33;gene_biotype=protein_coding;gene_synonym=SCJ1.33;locus_tag=SCO0184
NC_003888.3	RefSeq	CDS	172170	173984	.	+	0	ID=cds162;Parent=gene171;Dbxref=Genbank:NP_624520.1,GeneID:1095608;Name=NP_624520.1;Note=SCJ1.33 unknown%2C len: 604 aa. Highly similar to Synechocystis sp. (strain PCC6803) TR:P74080 (EMBL%3BD90912) hypothetical 58.1 KD protein (504 aa)%2C fasta scores opt: 931 z-score: 996.4 E(): 0 38.8%25 identity in 479 aa overlap and Methanobacterium thermoautotrophicum TR:O27804 (EMBL%3BAE000932) conserved protein MTH1776 (491 aa)%2C fasta scores opt: 572 z-score: 613.5 E(): 8.1e-27 31.7%25 identity in 483 aa overlap. Also shares a low level of similarity with Streptomyces coelicolor TR:CAB48919 (EMBL%3BAL096837) deoxyribodipyrimidine photolyase SCF43A.32 (458 aa)%2C fasta scores opt: 176 z-score: 191.4 E(): 0.0026 31.1%25 identity in 219 aa overlap.;gbkey=CDS;gene=SCJ1.33;product=hypothetical protein;protein_id=NP_624520.1;transl_table=11
NC_003888.3	RefSeq	gene	173768	174946	.	+	.	ID=gene172;Dbxref=GeneID:1095609;Name=crtB;gbkey=Gene;gene=crtB;gene_biotype=protein_coding;gene_synonym=crtB,SCJ1.34;locus_tag=SCO0185
NC_003888.3	RefSeq	CDS	173768	174946	.	+	0	ID=cds163;Parent=gene172;Dbxref=Genbank:NP_624521.1,GeneID:1095609;Name=NP_624521.1;Note=SCJ1.34%2C crtB%2C possible geranylgeranyl pyrophosphate synthase%2C len: 392 aa. Shares a high level of similarity with Streptomyces griseus TR:Q54193 (EMBL:L37405) geranylgeranyl pyrophosphate synthase (425 aa)%2C fasta scores: opt: 964 z-score: 1076.9 E(): 0 48.0%25 identity in 381 aa overlap and Mycobacterium tuberculosis TR:O53507 (EMBL:AL021957) geranylgeranyl pyrophosphate synthase (352 aa)%2C fasta scores opt: 742 z-score: 831.2 E(): 0 43.0%25 identity in 328 aa overlap. Contains a PS00723 Polyprenyl synthetases signature 1;gbkey=CDS;gene=crtB;product=geranylgeranyl pyrophosphate synthase;protein_id=NP_624521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	174113	174157	.	+	.	ID=id161;Dbxref=GeneID:1095609;Note=PS00723 Polyprenyl synthetases signature 1%2C [LIVM]{2}.DD.{2%2C4}D.{4}RR[GH]%2C info count %3D 26.9;gbkey=misc_feature;gene=crtB
NC_003888.3	RefSeq	gene	174943	176514	.	+	.	ID=gene173;Dbxref=GeneID:1095610;Name=crtE;gbkey=Gene;gene=crtE;gene_biotype=protein_coding;gene_synonym=crtE,SCJ1.35;locus_tag=SCO0186
NC_003888.3	RefSeq	CDS	174943	176514	.	+	0	ID=cds164;Parent=gene173;Dbxref=Genbank:NP_624522.1,GeneID:1095610;Name=NP_624522.1;Note=SCJ1.35%2C crtE%2C probable phytoene dehydrogenase (phytoene desaturase) (hypothetical protein)%2C len: 523 aa. High level of similarity to Streptomyces griseus SW:CRTI_STRGR (EMBL%3B L37405) phytoene dehydrogenase (EC 1.3.-.-) (phytoene desaturase) (507 aa)%2C fasta scores opt: 2459 z-score: 2615.3 E(): 0%3B 74.5%25 identity in 501 aa overlap and Streptomyces setonii SW:CRTI_STRSE (EMBL%3B D55723) phytoene dehydrogenase (EC 1.3.-.-) (phytoene desaturase) (508 aa)%2C fasta scores opt: 2455 z-score: 2611.0 E(): 0%3B 74.3%25 identity in 498 aa overlap. Contains a PS00982 Bacterial-type phytoene dehydrogenase signature;gbkey=CDS;gene=crtE;product=phytoene dehydrogenase;protein_id=NP_624522.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	176326	176388	.	+	.	ID=id162;Dbxref=GeneID:1095610;Note=PS00982 Bacterial-type phytoene dehydrogenase signature;gbkey=misc_feature;gene=crtE
NC_003888.3	RefSeq	gene	176501	177496	.	+	.	ID=gene174;Dbxref=GeneID:1095611;Name=crtI;gbkey=Gene;gene=crtI;gene_biotype=protein_coding;gene_synonym=crtI,SCJ1.36;locus_tag=SCO0187
NC_003888.3	RefSeq	CDS	176501	177496	.	+	0	ID=cds165;Parent=gene174;Dbxref=Genbank:NP_624523.1,GeneID:1095611;Name=NP_624523.1;Note=SCJ1.36%2C crtI%2C probable phytoene synthase%2C len: 331 aa. Shares a high level of similarity with Streptomyces griseus SW:CRTB_STRGR (EMBL%3B L37405) phytoene synthase (342 aa)%2C fasta scores opt: 1388 z-score: 1657.5 E(): 0 67.6%25 identity in 343 aa overlap and Mycobacterium marinum TR: O05423 (EMBL%3B U92075) phytoene synthase (319 aa)%2C fasta scores opt: 996 z-score: 1191.5 E():0 52.2%25 identity in 316 aa overlap. Contains a PS01045 Squalene and phytoene synthases signature 2 and a Pfam match to entry PF00494 SQS_PSY%2C Squalene and phytoene synthases;gbkey=CDS;gene=crtI;product=phytoene synthase;protein_id=NP_624523.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	176645	177415	.	+	.	ID=id163;Dbxref=GeneID:1095611;Note=Pfam match to entry PF00494 SQS_PSY%2C Squalene and phytoene synthases%2C score 253.20%2C E-value 3.5e-72;gbkey=misc_feature;gene=crtI
NC_003888.3	RefSeq	sequence_feature	177020	177097	.	+	.	ID=id164;Dbxref=GeneID:1095611;Note=PS01045 Squalene and phytoene synthases signature 2;gbkey=misc_feature;gene=crtI
NC_003888.3	RefSeq	gene	177493	178503	.	+	.	ID=gene175;Dbxref=GeneID:1095612;Name=crtV;gbkey=Gene;gene=crtV;gene_biotype=protein_coding;gene_synonym=crtV,SCJ1.37;locus_tag=SCO0188
NC_003888.3	RefSeq	CDS	177493	178503	.	+	0	ID=cds166;Parent=gene175;Dbxref=Genbank:NP_624524.1,GeneID:1095612;Name=NP_624524.1;Note=SCJ1.37%2C crtV%2C probable methylesterase%2C len: 336 aa. Highly similar to Streptomyces griseus TR:P72448 (EMBL%3B X95596) methylesterase (338 aa)%2C fasta scores opt: 1315 z-score: 1538.7 E(): 0 60.5%25 identity in 337 aa overlap;gbkey=CDS;gene=crtV;product=methylesterase;protein_id=NP_624524.1;transl_table=11
NC_003888.3	RefSeq	gene	178519	180087	.	-	.	ID=gene176;Dbxref=GeneID:1095613;Name=crtU;gbkey=Gene;gene=crtU;gene_biotype=protein_coding;gene_synonym=crtU,SCJ1.38c;locus_tag=SCO0189
NC_003888.3	RefSeq	CDS	178519	180087	.	-	0	ID=cds167;Parent=gene176;Dbxref=Genbank:NP_733493.1,GeneID:1095613;Name=NP_733493.1;Note=SCJ1.38c%2C crtU%2C probable dehydrogenase%2C a partial CDS%2C len: >336 aa. Highly similar to Streptomyces griseus TR:P72449 (EMBL:X95596) dehydrogenase (517 aa)%2C fasta scores opt: 1277 z-score: 1459.8 E():0 69.0%25 identity in 281 aa overlap and Synechocystis sp SW:CRTI_SYNY3 (EMBL%3B X62574) phytoene dehydrogenase (427 aa)%2C fasta scores opt: 133 z-score: 155.8 E():0.25 24.6%25 identity in 260 aa overlap.~SCJ12.01c%2C crtU%2C probable dehydrogenase%2C partial CDS%2C len: >278 aa. Highly similar to Streptomyces griseus TR:P72449 (EMBL:X95596) dehydrogenase (517 aa)%2C fasta scores opt: 1311 z-score: 1471.3 E(): 0 74.0%25 identity in 269 aa overlap and Synechocystis sp. (strain PCC 6803) SW:CRTI_SYNY3 (EMBL:X62574) phytoene dehydrogenase (EC 1.3.-.-) (phytoene desaturase) (427 aa)%2C fasta scores opt: 219 z-score: 250.2 E(): 1.4e-06 27.6%25 identity in 254 aa overlap.;gbkey=CDS;gene=crtU;product=dehydrogenase;protein_id=NP_733493.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	179252	179384	.	+	.	ID=id165;Note=665 (-1) 36793 36925 overlap with cosmid StJ1;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	179252	179384	.	-	.	ID=id166;Dbxref=GeneID:1095613;Note=overlap with StJ12;gbkey=misc_feature;gene=crtU
NC_003888.3	RefSeq	gene	180084	180824	.	-	.	ID=gene177;Dbxref=GeneID:1095614;Name=crtT;gbkey=Gene;gene=crtT;gene_biotype=protein_coding;gene_synonym=crtT,SCJ12.02c;locus_tag=SCO0190
NC_003888.3	RefSeq	CDS	180084	180824	.	-	0	ID=cds168;Parent=gene177;Dbxref=Genbank:NP_624525.1,GeneID:1095614;Name=NP_624525.1;Note=SCJ12.02c%2C crtT%2C probable methyltransferase%2C len: 246 aa. Shares a high level of sequence similarity with Streptomyces griseus TR:P72450 (EMBL:X95596) methyltransferase (242 aa)%2C fasta scores opt: 984 z-score: 1164.2 E(): 0 65.0%25 identity in 234 aa overlap. Contains a Pfam match to entry PF01209 Ubie_methyltran%2C ubiE/COQ5 methyltransferase family;gbkey=CDS;gene=crtT;product=methyltransferase;protein_id=NP_624525.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	180096	180101	.	-	.	ID=id167;Dbxref=GeneID:1095614;gbkey=RBS;gene=crtT
NC_003888.3	RefSeq	sequence_feature	180123	180824	.	-	.	ID=id168;Dbxref=GeneID:1095614;Note=Pfam match to entry PF01209 Ubie_methyltran%2C ubiE/COQ5 methyltransferase family%2C score -45.20%2C E-value 1.1e-08;gbkey=misc_feature;gene=crtT
NC_003888.3	RefSeq	gene	180821	182038	.	-	.	ID=gene178;Dbxref=GeneID:1095615;Name=crtY;gbkey=Gene;gene=crtY;gene_biotype=protein_coding;gene_synonym=crtY,SCJ12.03c;locus_tag=SCO0191
NC_003888.3	RefSeq	CDS	180821	182038	.	-	0	ID=cds169;Parent=gene178;Dbxref=Genbank:NP_624526.1,GeneID:1095615;Name=NP_624526.1;Note=SCJ12.03c%2C crtY%2C probable lycopene cyclase%2C len: 405 aa. Highly similar to Streptomyces griseus TR:P72451 (EMBL:X95596) lycopene cyclase (418 aa)%2C fasta scores opt: 1426 z-score: 1602.7 E(): 0 56.3%25 identity in 396 aa overlap;gbkey=CDS;gene=crtY;product=lycopene cyclase;protein_id=NP_624526.1;transl_table=11
NC_003888.3	RefSeq	gene	182309	183559	.	-	.	ID=gene179;Dbxref=GeneID:1095616;Name=SCJ12.04c;gbkey=Gene;gene=SCJ12.04c;gene_biotype=protein_coding;gene_synonym=SCJ12.04c;locus_tag=SCO0192
NC_003888.3	RefSeq	CDS	182309	183559	.	-	0	ID=cds170;Parent=gene179;Dbxref=Genbank:NP_624527.1,GeneID:1095616;Name=NP_624527.1;Note=SCJ12.04c%2C possible oxidoreductase%2C len: 416 aa. Similar to many protoporphyrinogen oxidases including: Propionibacterium freudenreichii shermanii SW:PPOX_PROFR (EMBL:D85417) HemY (527 aa)%2C fasta scores opt: 228 z-score: 249.0 E(): 1.6e-06 26.8%25 identity in 504 aa overlap and Bacillus subtilis SW:PPOX_BACSU (EMBL%3B M97208) HemY (470 aa)%2C fasta scores opt: 209 z-score: 229.3 E(): 2.1e-05 25.7%25 identity in 311 aa overlap. Contains a Pfam match to entry PF01593 Amino_oxidase;gbkey=CDS;gene=SCJ12.04c;product=oxidoreductase;protein_id=NP_624527.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	182333	183508	.	-	.	ID=id169;Dbxref=GeneID:1095616;Note=Pfam match to entry PF01593 Amino_oxidase%2C score -105.60%2C E-value 0.0012;gbkey=misc_feature;gene=SCJ12.04c
NC_003888.3	RefSeq	ribosome_entry_site	183564	183568	.	-	.	ID=id170;gbkey=RBS
NC_003888.3	RefSeq	gene	183793	184797	.	-	.	ID=gene180;Dbxref=GeneID:1095617;Name=SCJ12.05c;gbkey=Gene;gene=SCJ12.05c;gene_biotype=protein_coding;gene_synonym=SCJ12.05c;locus_tag=SCO0193
NC_003888.3	RefSeq	CDS	183793	184797	.	-	0	ID=cds171;Parent=gene180;Dbxref=Genbank:NP_624528.1,GeneID:1095617;Name=NP_624528.1;Note=SCJ12.05c%2C possible DNA-binding regulator%2C len:334 aa. Some similarity to Myxococcus xanthus TR:Q50900 (EMBL:Z21955) regulatory protein (299 aa)%2C fasta scores opt: 121 z-score: 141.6 E(): 1.6 32.4%25 identity in 281 aa overlap and Myxococcus xanthus TR:Q50899 (EMBL:Z21955) regulatory protein (288 aa)%2C fasta scores opt: 118 z-score: 138.5 E() 2.4 26.9%25 identity in 279 aa overlap. Contains a possible helix-turn-helix motif between aa's 23..44.;gbkey=CDS;gene=SCJ12.05c;product=DNA-binding regulator;protein_id=NP_624528.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	184945	184950	.	+	.	ID=id171;gbkey=RBS
NC_003888.3	RefSeq	gene	184958	185566	.	+	.	ID=gene181;Dbxref=GeneID:1095618;Name=SCJ12.06;gbkey=Gene;gene=SCJ12.06;gene_biotype=protein_coding;gene_synonym=SCJ12.06;locus_tag=SCO0194
NC_003888.3	RefSeq	CDS	184958	185566	.	+	0	ID=cds172;Parent=gene181;Dbxref=Genbank:NP_624529.1,GeneID:1095618;Name=NP_624529.1;Note=SCJ12.06%2C possible sigma factor%2C len: 202 aa. Similar to many including: Rhodobacter sphaeroide TR:O33546 (EMBL%3B U11283) RpoE homologue (168 aa)%2C fasta scores opt: 291 z-score: 373.4 E(): 1.9e-13 35.4%25 identity in 161 aa overlap and Streptomyces coelicolor TR:O54163 (EMBL%3B AL021411) sigma factor SC7H1.04 (200 aa)%2C fasta scores opt: 255 z-score: 327.4 E(): 7.1e-11 33.7%25 identity in 184 aa overlap. Contains a PS01063 Sigma-70 factors ECF subfamily signature and a Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily). Contains a possible helix-turn-helix motif between aa's 162..183.;gbkey=CDS;gene=SCJ12.06;product=sigma factor;protein_id=NP_624529.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	185102	185308	.	+	.	ID=id172;Dbxref=GeneID:1095618;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 47.10%2C E-value 3.8e-10;gbkey=misc_feature;gene=SCJ12.06
NC_003888.3	RefSeq	sequence_feature	185138	185236	.	+	.	ID=id173;Dbxref=GeneID:1095618;Note=PS01063 Sigma-70 factors ECF subfamily signature%2C info count %3D 32.1;gbkey=misc_feature;gene=SCJ12.06
NC_003888.3	RefSeq	ribosome_entry_site	185660	185664	.	+	.	ID=id174;gbkey=RBS
NC_003888.3	RefSeq	gene	185675	186361	.	+	.	ID=gene182;Dbxref=GeneID:1095619;Name=SCJ12.07;gbkey=Gene;gene=SCJ12.07;gene_biotype=protein_coding;gene_synonym=SCJ12.07;locus_tag=SCO0195
NC_003888.3	RefSeq	CDS	185675	186361	.	+	0	ID=cds173;Parent=gene182;Dbxref=Genbank:NP_624530.1,GeneID:1095619;Name=NP_624530.1;Note=SCJ12.07%2C possible lipoprotein%2C len: 228 aa. Contains an N-terminal signal sequence and a PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCJ12.07;product=lipoprotein;protein_id=NP_624530.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	185690	185722	.	+	.	ID=id175;Dbxref=GeneID:1095619;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCJ12.07
NC_003888.3	RefSeq	ribosome_entry_site	186472	186477	.	+	.	ID=id176;gbkey=RBS
NC_003888.3	RefSeq	gene	186483	186887	.	+	.	ID=gene183;Dbxref=GeneID:1095620;Name=SCJ12.08;gbkey=Gene;gene=SCJ12.08;gene_biotype=protein_coding;gene_synonym=SCJ12.08;locus_tag=SCO0196
NC_003888.3	RefSeq	CDS	186483	186887	.	+	0	ID=cds174;Parent=gene183;Dbxref=Genbank:NP_624531.1,GeneID:1095620;Name=NP_624531.1;Note=SCJ12.08%2C unknown%2C len:134 aa. Shares a low level of similarity with Mycobacterium tuberculosis TR:O53597 (EMBL%3B AL021426) hypothetical 24.0 KD protein MTV028.10C (224 aa)%2C fasta scores opt: 119 z-score: 159.2 E(): 0.1 32.8%25 identity in 116 aa overlap.;gbkey=CDS;gene=SCJ12.08;product=hypothetical protein;protein_id=NP_624531.1;transl_table=11
NC_003888.3	RefSeq	gene	187019	187459	.	-	.	ID=gene184;Dbxref=GeneID:1095621;Name=SCJ12.09c;gbkey=Gene;gene=SCJ12.09c;gene_biotype=protein_coding;gene_synonym=SCJ12.09c;locus_tag=SCO0197
NC_003888.3	RefSeq	CDS	187019	187459	.	-	0	ID=cds175;Parent=gene184;Dbxref=Genbank:NP_624532.1,GeneID:1095621;Name=NP_624532.1;Note=SCJ12.09c%2C hypothetical protein%2C len: 146 aa. Some similarity to Mycobacterium tuberculosis TR:O53625 (EMBL%3B AL021428) hypothetical 16.6 KD protein (152 aa)%2C fasta scores opt: 291 z-score: 377.8 E(): 1.1e-13 42.9%25 identity in 133 aa overlap. Also similar to TR:Q9RI34 (EMBL:AL109989) S. coelicolor SCJ12.26 (137 aa)%2C fasta scores: opt: 524 z-score: 568.0 E(): 2.2e-26 62.2%25 identity in 135 aa overlap;gbkey=CDS;gene=SCJ12.09c;product=hypothetical protein;protein_id=NP_624532.1;transl_table=11
NC_003888.3	RefSeq	gene	187992	188858	.	-	.	ID=gene185;Dbxref=GeneID:1095622;Name=SCJ12.10c;gbkey=Gene;gene=SCJ12.10c;gene_biotype=protein_coding;gene_synonym=SCJ12.10c;locus_tag=SCO0198
NC_003888.3	RefSeq	CDS	187992	188858	.	-	0	ID=cds176;Parent=gene185;Dbxref=Genbank:NP_624533.1,GeneID:1095622;Name=NP_624533.1;Note=SCJ12.10c%2C unknown%2C len: 288 aa. Similar to several hypothetical proteins including: Mycobacterium tuberculosis SW:YW12_MYCTU (EMBL%3B Z74025) hypothetical 30.9 KD protein MTCY39.12 (295 aa)%2C fasta scores opt: 363 z-score: 441.0 E(): 3.3e-17 32.3%25 identity in 288 aa overlap and Mycobacterium tuberculosis TR:O06189 (EMBL%3B Z95387) hypothetical 31.7 KD protein MTCY1A10.09C (297 aa)%2C fasta scores opt: 336 z-score: 408.6 E(): 2.1e-15 29.3%25 identity in 294 aa overlap. Also highly similar to S. coelicolor hypothetical proteins (AL109962) SCJ1.29c (283 aa)%2C fasta scores opt: 1161 z-score: 1097.2 E(): 0 63.5%25 identity in 288 aa overlap and SCJ1.16c (294 aa)%2C fasta scores opt:892 z-score: 844.7 E():0 50.3%25 identity in 296 aa overlap;gbkey=CDS;gene=SCJ12.10c;product=hypothetical protein;protein_id=NP_624533.1;transl_table=11
NC_003888.3	RefSeq	gene	188864	189886	.	-	.	ID=gene186;Dbxref=GeneID:1095623;Name=SCJ12.11c;gbkey=Gene;gene=SCJ12.11c;gene_biotype=protein_coding;gene_synonym=SCJ12.11c;locus_tag=SCO0199
NC_003888.3	RefSeq	CDS	188864	189886	.	-	0	ID=cds177;Parent=gene186;Dbxref=Genbank:NP_624534.1,GeneID:1095623;Name=NP_624534.1;Note=SCJ12.11c%2C probable alcohol dehydrogenase%2C len: 340 aa. Highly similar to many e.g. Bacillus stearothermophilus SW:ADH3_BACST (EMBL%3B Z27089) alcohol dehydrogenase (EC 1.1.1.1) (ADH-HT) (339 aa)%2C fasta scores opt: 1281 z-score: 1383.7 E(): 0 55.2%25 identity in 337 aa overlap. Contains a PS00059 Zinc-containing alcohol dehydrogenases signature and a Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=CDS;gene=SCJ12.11c;product=alcohol dehydrogenase;protein_id=NP_624534.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	188868	188872	.	-	.	ID=id177;Dbxref=GeneID:1095623;gbkey=RBS;gene=SCJ12.11c
NC_003888.3	RefSeq	sequence_feature	188882	189880	.	-	.	ID=id178;Dbxref=GeneID:1095623;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 359.60%2C E-value 3.2e-104;gbkey=misc_feature;gene=SCJ12.11c
NC_003888.3	RefSeq	sequence_feature	189665	189709	.	-	.	ID=id179;Dbxref=GeneID:1095623;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=misc_feature;gene=SCJ12.11c
NC_003888.3	RefSeq	ribosome_entry_site	189894	189899	.	-	.	ID=id180;gbkey=RBS
NC_003888.3	RefSeq	gene	189925	190830	.	-	.	ID=gene187;Dbxref=GeneID:1095624;Name=SCJ12.12c;gbkey=Gene;gene=SCJ12.12c;gene_biotype=protein_coding;gene_synonym=SCJ12.12c;locus_tag=SCO0200
NC_003888.3	RefSeq	CDS	189925	190830	.	-	0	ID=cds178;Parent=gene187;Dbxref=Genbank:NP_624535.1,GeneID:1095624;Name=NP_624535.1;Note=SCJ12.12c%2C unknown%2C len: 301 aa. Similar to several hypothetical proteins including: Mycobacterium tuberculosis SW:YW23_MYCTU (EMBL%3B Z74025) hypothetical 33.9 KD protein MTCY39.23C (317 aa)%2C fasta scores opt: 380 z-score: 447.3 E(): 1.5e-17 33.5%25 identity in 316 aa overlap and S. coelicolor (EMBL%3BAL109962) SCJ1.30c (328 aa)fasta scores opt: 1274 z-score: 1163.7 E():0 65.3%25 identity in 300 aa overlap. Contains 2x Pfam match to entry PF00582 Usp%2C Universal stress protein family.;gbkey=CDS;gene=SCJ12.12c;product=hypothetical protein;protein_id=NP_624535.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	189937	190254	.	-	.	ID=id181;Dbxref=GeneID:1095624;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 47.30%2C E-value 3.4e-10;gbkey=misc_feature;gene=SCJ12.12c
NC_003888.3	RefSeq	sequence_feature	190420	190731	.	-	.	ID=id182;Dbxref=GeneID:1095624;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 27.00%2C E-value 0.00011;gbkey=misc_feature;gene=SCJ12.12c
NC_003888.3	RefSeq	gene	190983	191654	.	-	.	ID=gene188;Dbxref=GeneID:1095625;Name=SCJ12.13c;gbkey=Gene;gene=SCJ12.13c;gene_biotype=protein_coding;gene_synonym=SCJ12.13c;locus_tag=SCO0201
NC_003888.3	RefSeq	CDS	190983	191654	.	-	0	ID=cds179;Parent=gene188;Dbxref=Genbank:NP_624536.1,GeneID:1095625;Name=NP_624536.1;Note=SCJ12.13c%2C possible integral membrane protein%2C len: 223 aa. Contains potential membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCJ12.13c;product=hypothetical protein;protein_id=NP_624536.1;transl_table=11
NC_003888.3	RefSeq	gene	191919	192848	.	+	.	ID=gene189;Dbxref=GeneID:1095626;Name=SCJ12.14;gbkey=Gene;gene=SCJ12.14;gene_biotype=protein_coding;gene_synonym=SCJ12.14;locus_tag=SCO0202
NC_003888.3	RefSeq	CDS	191919	192848	.	+	0	ID=cds180;Parent=gene189;Dbxref=Genbank:NP_624537.1,GeneID:1095626;Name=NP_624537.1;Note=SCJ12.14%2C unknown%2C len: 309 aa. Similar to Mycobacterium tuberculosis TR:P95195 (EMBL%3B Z83867) hypothetical 36.0 KD protein MTCY03A2.27C (332 aa)%2C fasta scores opt: 331 z-score: 377.3 E(): 1.2e-13 28.1%25 identity in 310 aa overlap and S. coelicolor SCJ12.27c (335 aa)%2C fasta scores opt: 780 z-score: 721.8 E(): 5.9e-35 45.8%25 identity in 308 aa overlap;gbkey=CDS;gene=SCJ12.14;product=hypothetical protein;protein_id=NP_624537.1;transl_table=11
NC_003888.3	RefSeq	gene	192880	194637	.	-	.	ID=gene190;Dbxref=GeneID:1095627;Name=SCJ12.15c;gbkey=Gene;gene=SCJ12.15c;gene_biotype=protein_coding;gene_synonym=SCJ12.15c;locus_tag=SCO0203
NC_003888.3	RefSeq	CDS	192880	194637	.	-	0	ID=cds181;Parent=gene190;Dbxref=Genbank:NP_624538.1,GeneID:1095627;Name=NP_624538.1;Note=SCJ12.15c%2C probable two-component sensor. len: 585 aa. Similarity to Streptomyces coelicolor TR:Q9ZBY4 (EMBL%3B AL034355) two component sensor SCD78.15 (560 aa)%2C fasta scores opt: 1439 z-score: 1571.0 E(): 0 44.7%25 identity in 553 aa overlap. Also some similarity to Pseudomonas aeruginosa TR:O54040 (EMBL%3B Y15252) nitrate/nitrite sensory protein NarX (622 aa)%2C fasta scores opt: 315 z-score: 344.5 E(): 7.9e-1 29.0%25 identity in 297 aa overlap. Contains 2x Pfam match to entry PF01590 GAF and potential membrane spanning hydrophobic domains. Probable coiled-coil from 17 to 48 (32 residues).;gbkey=CDS;gene=SCJ12.15c;product=two-component sensor;protein_id=NP_624538.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	193540	193968	.	-	.	ID=id183;Dbxref=GeneID:1095627;Note=Pfam match to entry PF01590 GAF%2C %2C score 40.30%2C E-value 4.3e-08;gbkey=misc_feature;gene=SCJ12.15c
NC_003888.3	RefSeq	sequence_feature	194044	194475	.	-	.	ID=id184;Dbxref=GeneID:1095627;Note=Pfam match to entry PF01590 GAF%2C %2C score 93.20%2C E-value 5.3e-24;gbkey=misc_feature;gene=SCJ12.15c
NC_003888.3	RefSeq	ribosome_entry_site	194644	194649	.	-	.	ID=id185;gbkey=RBS
NC_003888.3	RefSeq	gene	194760	195461	.	-	.	ID=gene191;Dbxref=GeneID:1095628;Name=SCJ12.16c;gbkey=Gene;gene=SCJ12.16c;gene_biotype=protein_coding;gene_synonym=SCJ12.16c;locus_tag=SCO0204
NC_003888.3	RefSeq	CDS	194760	195461	.	-	0	ID=cds182;Parent=gene191;Dbxref=Genbank:NP_624539.1,GeneID:1095628;Name=NP_624539.1;Note=SCJ12.16c%2C probable LuxR family transcriptional regulator%2C len: 233 aa. Highly similar to many including: several Streptomyces coelicolor two-component response regulators such as SW:CAB46941 (EMBL%3B AL096822) response regulator SCGD3.19 (218 aa)%2C fasta scores opt: 865 z-score: 987.7 E(): 0 64.7%25 identity in 215 aa overlap. In addition to Pseudomonas aeruginosa TR:O54039 (EMBL%3B Y15252) nitrate/nitrite regulatory protein NarL (216 aa)%2C fasta scores opt: 458 z-score: 528.5 E(): 4.4e-22 38.6%25 identity in 210 aa overlap. Contains a Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and a PS00622 Bacterial regulatory proteins%2C luxR family signature. Contains a possible helix-turn-helix motif between aa's 182..203.;gbkey=CDS;gene=SCJ12.16c;product=LuxR family transcriptional regulator;protein_id=NP_624539.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	194778	194975	.	-	.	ID=id186;Dbxref=GeneID:1095628;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 71.90%2C E-value 1.3e-17;gbkey=misc_feature;gene=SCJ12.16c
NC_003888.3	RefSeq	sequence_feature	194841	194924	.	-	.	ID=id187;Dbxref=GeneID:1095628;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=SCJ12.16c
NC_003888.3	RefSeq	sequence_feature	195081	195422	.	-	.	ID=id188;Dbxref=GeneID:1095628;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 110.90%2C E-value 2.5e-29;gbkey=misc_feature;gene=SCJ12.16c
NC_003888.3	RefSeq	ribosome_entry_site	195468	195473	.	-	.	ID=id189;gbkey=RBS
NC_003888.3	RefSeq	gene	195554	196280	.	-	.	ID=gene192;Dbxref=GeneID:1095629;Name=SCJ12.17c;gbkey=Gene;gene=SCJ12.17c;gene_biotype=pseudogene;gene_synonym=SCJ12.17c;locus_tag=SCO0205;pseudo=true
NC_003888.3	RefSeq	sequence_feature	195554	196280	.	-	.	ID=id190;Dbxref=GeneID:1095629;Note=SCJ12.17c possible pyruvate formate-lyase activating enzyme pseudogene. Similar to many e.g. Escherichia coli SW:PFLA_ECOLI (EMBL%3B X08035) pyruvate formate-lyase 1 activating enzyme (EC 1.97.1.4) (245 aa).%3Bpyruvate formate-lyase activating enzyme (pseudogene);gbkey=misc_feature;gene=SCJ12.17c
NC_003888.3	RefSeq	gene	196306	196443	.	-	.	ID=gene193;Dbxref=GeneID:1095630;Name=SCJ12.18c;gbkey=Gene;gene=SCJ12.18c;gene_biotype=pseudogene;gene_synonym=SCJ12.18c;locus_tag=SCO0206;pseudo=true
NC_003888.3	RefSeq	sequence_feature	196306	196443	.	-	.	ID=id191;Dbxref=GeneID:1095630;Note=SCJ12.18c%2C possible acetyltransferase pseudogene%2C len: 46 aa. Highly similar to several acetyltransferases (over limited sequence) e.g. Escherichia coli SW:TDCE_ECOLI (EMBL%3B U18997) keto-acid formate acetyltransferase (EC 2.3.1.-) (keto-acid formate-lyase) (746 aa)%2C fasta scores opt: 161 z-score: 250.4 E(): 1.3e-06 71.9%25 identity in 32 aa overlap%3Bacetyltransferase (pseudogene);gbkey=misc_feature;gene=SCJ12.18c
NC_003888.3	RefSeq	gene	196386	196991	.	-	.	ID=gene194;Dbxref=GeneID:1095631;Name=SCJ12.19c;gbkey=Gene;gene=SCJ12.19c;gene_biotype=protein_coding;gene_synonym=SCJ12.19c;locus_tag=SCO0207
NC_003888.3	RefSeq	CDS	196386	196991	.	-	0	ID=cds183;Parent=gene194;Dbxref=Genbank:NP_624540.1,GeneID:1095631;Name=NP_624540.1;Note=SCJ12.19c%2C unknown%2C len: 201 aa. Weakly similar to many hypotheticals e.g. Thermus aquaticus SW:YQA3_THEAQ (EMBL%3B D87664) hypothetical 14.6 KD protein in QAH/OAS sulfhydrylase 3'region (137 aa)%2C fasta scores opt: 172 z-score: 213.8 E(): 0.00015 35.9%25 identity in 142 aa overlap. Also similar to the N-terminal region of TR:Q9RI46 (EMBL:AL109989) Streptomyces coelicolor hypothetical protein SCJ12.12c%2C 301 aa%3B fasta scores: opt: 466 Z-score: 532.5 E(): 5e-22%3B 42.500%25 identity in 200 aa overlap;gbkey=CDS;gene=SCJ12.19c;product=hypothetical protein;protein_id=NP_624540.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	197206	197211	.	+	.	ID=id192;gbkey=RBS
NC_003888.3	RefSeq	gene	197221	199917	.	+	.	ID=gene195;Dbxref=GeneID:1095632;Name=SCJ12.20;gbkey=Gene;gene=SCJ12.20;gene_biotype=protein_coding;gene_synonym=SCJ12.20;locus_tag=SCO0208
NC_003888.3	RefSeq	CDS	197221	199917	.	+	0	ID=cds184;Parent=gene195;Dbxref=Genbank:NP_624541.1,GeneID:1095632;Name=NP_624541.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=SCJ12.20;product=pyruvate phosphate dikinase;protein_id=NP_624541.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	197263	198312	.	+	.	ID=id193;Dbxref=GeneID:1095632;Note=Pfam match to entry PF01326 PPDK_N_term%2C Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain%2C score 389.00%2C E-value 4.7e-113;gbkey=misc_feature;gene=SCJ12.20
NC_003888.3	RefSeq	sequence_feature	198481	199773	.	+	.	ID=id194;Dbxref=GeneID:1095632;Note=Pfam match to entry PF00391 PEP-utilizers%2C PEP-utilizing enzymes%2C score 372.90%2C E-value 3.2e-108;gbkey=misc_feature;gene=SCJ12.20
NC_003888.3	RefSeq	sequence_feature	198556	198591	.	+	.	ID=id195;Dbxref=GeneID:1095632;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature.;gbkey=misc_feature;gene=SCJ12.20
NC_003888.3	RefSeq	ribosome_entry_site	200011	200015	.	+	.	ID=id196;gbkey=RBS
NC_003888.3	RefSeq	gene	200024	200428	.	+	.	ID=gene196;Dbxref=GeneID:1095633;Name=SCJ12.21;gbkey=Gene;gene=SCJ12.21;gene_biotype=protein_coding;gene_synonym=SCJ12.21;locus_tag=SCO0209
NC_003888.3	RefSeq	CDS	200024	200428	.	+	0	ID=cds185;Parent=gene196;Dbxref=Genbank:NP_624542.1,GeneID:1095633;Name=NP_624542.1;Note=SCJ12.21%2C unknown%2C len: 134 aa.;gbkey=CDS;gene=SCJ12.21;product=hypothetical protein;protein_id=NP_624542.1;transl_table=11
NC_003888.3	RefSeq	gene	200728	201369	.	+	.	ID=gene197;Dbxref=GeneID:1095634;Name=SCJ12.22;gbkey=Gene;gene=SCJ12.22;gene_biotype=protein_coding;gene_synonym=SCJ12.22;locus_tag=SCO0210
NC_003888.3	RefSeq	CDS	200728	201369	.	+	0	ID=cds186;Parent=gene197;Dbxref=Genbank:NP_624543.1,GeneID:1095634;Name=NP_624543.1;Note=SCJ12.22%2C hypothetical protein%2C len: 213 aa. Similar in parts to several hypotheticals e.g. Methanopyrus kandleri SW:IMDH_METKA (EMBL%3B U31567) OrfX (fragment) (172 aa)%2C fasta scores opt: 251 z-score: 300.4 E(): 2.3e-09 34.5%25 identity in 116 aa overlap. Also similar to S. coelicolor conserved hypothetical proteins (AL109962) SCJ1.19c (223 aa)%2C fasta scores opt: 411 z-score: 396.5 E(): 7.9e-17 47.3%25 identity in 201 aa overlap and SCJ1.18 (217 aa)%2C fasta scores opt: 371 z-score: 359.1 E(): 9.5e-15 44.4%25 identity in 196 aa overlap. Contains 2x Pfam matches to entry PF00571 CBS%2C CBS domains.;gbkey=CDS;gene=SCJ12.22;product=hypothetical protein;protein_id=NP_624543.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	200728	200883	.	+	.	ID=id197;Dbxref=GeneID:1095634;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 40.30%2C E-value 4.3e-08;gbkey=misc_feature;gene=SCJ12.22
NC_003888.3	RefSeq	sequence_feature	200926	201087	.	+	.	ID=id198;Dbxref=GeneID:1095634;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 64.90%2C E-value 1.7e-15;gbkey=misc_feature;gene=SCJ12.22
NC_003888.3	RefSeq	gene	201374	202090	.	+	.	ID=gene198;Dbxref=GeneID:1095635;Name=SCJ12.23;gbkey=Gene;gene=SCJ12.23;gene_biotype=protein_coding;gene_synonym=SCJ12.23;locus_tag=SCO0211
NC_003888.3	RefSeq	CDS	201374	202090	.	+	0	ID=cds187;Parent=gene198;Dbxref=Genbank:NP_624544.1,GeneID:1095635;Name=NP_624544.1;Note=SCJ12.23%2C unknown%2C len: 238 aa. Weakly similar%2C in parts%2C to many two component sensor kinases e.g. E. coli SW:NARQ_ECOLI (EMBL%3B M94724) nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) (566 aa)%2C fasta scores opt: 424 z-score: 475.7 E(): 3.9e-19 39.5%25 identity in 238 aa overlap and Streptomyces coelicolor TR:Q9ZBY4 (EMBL%3B AL034355) two component sensor SCD78.15 (560 aa)%2C fasta scores opt: 424 z-score: 475.7 E(): 3.9e-19 39.5%25 identity in 238 aa overlap;gbkey=CDS;gene=SCJ12.23;product=hypothetical protein;protein_id=NP_624544.1;transl_table=11
NC_003888.3	RefSeq	gene	202370	202843	.	-	.	ID=gene199;Dbxref=GeneID:1095636;Name=SCJ12.24c;gbkey=Gene;gene=SCJ12.24c;gene_biotype=protein_coding;gene_synonym=SCJ12.24c;locus_tag=SCO0212
NC_003888.3	RefSeq	CDS	202370	202843	.	-	0	ID=cds188;Parent=gene199;Dbxref=Genbank:NP_624545.1,GeneID:1095636;Name=NP_624545.1;Note=SCJ12.24c%2C unknown%2C len: 157 aa.;gbkey=CDS;gene=SCJ12.24c;product=hypothetical protein;protein_id=NP_624545.1;transl_table=11
NC_003888.3	RefSeq	gene	202863	204101	.	-	.	ID=gene200;Dbxref=GeneID:1095637;Name=SCJ12.25c;gbkey=Gene;gene=SCJ12.25c;gene_biotype=protein_coding;gene_synonym=SCJ12.25c;locus_tag=SCO0213
NC_003888.3	RefSeq	CDS	202863	204101	.	-	0	ID=cds189;Parent=gene200;Dbxref=Genbank:NP_624546.1,GeneID:1095637;Name=NP_624546.1;Note=SCJ12.25c%2C possible nitrate/nitrite transporter%2C len: 412 aa. Similar to Bacillus subtilis SW:NARK_BACSU (EMBL%3B Z49884) nitrite extrusion protein (395 aa)%2C fasta scores opt: 834 z-score: 877.9 E():0 36.8%25 identity in 378 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCJ12.25c;product=nitrate/nitrite transporter;protein_id=NP_624546.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	204112	204117	.	-	.	ID=id199;gbkey=RBS
NC_003888.3	RefSeq	gene	204387	204800	.	+	.	ID=gene201;Dbxref=GeneID:1095638;Name=SCJ12.26;gbkey=Gene;gene=SCJ12.26;gene_biotype=protein_coding;gene_synonym=SCJ12.26;locus_tag=SCO0214
NC_003888.3	RefSeq	CDS	204387	204800	.	+	0	ID=cds190;Parent=gene201;Dbxref=Genbank:NP_624547.1,GeneID:1095638;Name=NP_624547.1;Note=SCJ12.26%2C hypothetical protein%2C len: 137 aa. Some similarity to several hypotheticals e.g. Mycobacterium tuberculosis TR:O53625 (EMBL%3B AL021428) hypothetical 16.6 KD protein (152 aa)%2C fasta scores opt: 291 z-score: 372.0 E(): 2.3e-13 46.5%25 identity in 129 aa overlap. Also similar to TR:Q9RI49 (EMBL:AL109989) S. coelicolor SCJ12.09c (146 aa)%2C fasta scores opt: 524 z-score: 550.7 E(): 2e-25 62.2%25 identity in 135 aa overlap;gbkey=CDS;gene=SCJ12.26;product=hypothetical protein;protein_id=NP_624547.1;transl_table=11
NC_003888.3	RefSeq	gene	204881	205888	.	-	.	ID=gene202;Dbxref=GeneID:1095639;Name=SCJ12.27c;gbkey=Gene;gene=SCJ12.27c;gene_biotype=protein_coding;gene_synonym=SCJ12.27c;locus_tag=SCO0215
NC_003888.3	RefSeq	CDS	204881	205888	.	-	0	ID=cds191;Parent=gene202;Dbxref=Genbank:NP_624548.1,GeneID:1095639;Name=NP_624548.1;Note=SCJ12.27c%2C unknown%2C len: 335 aa. Similar to several hypotheticals e.g. Mycobacterium tuberculosis TR:P95195 (EMBL%3B Z83867) hypothetical 36.0 KD protein (332 aa)%2C fasta scores opt: 441 z-score: 491.9 E(): 4.9e-20 35.7%25 identity in 319 aa overlap and S. coelicolor (AL109962) hypothetical protein SCJ1.11 (330 aa)%2C fasta scores opt: 816 z-score: 796.1 E():0 43.0%25 identity in 321 aa overlap and SCJ12.14 (309 aa)%2C fasta scores opt: 780 z-score: 755.6 E(): 0 45.8%25 identity in 308 aa overlap.;gbkey=CDS;gene=SCJ12.27c;product=hypothetical protein;protein_id=NP_624548.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	205894	205899	.	-	.	ID=id200;gbkey=RBS
NC_003888.3	RefSeq	gene	206480	210181	.	+	.	ID=gene203;Dbxref=GeneID:1095640;Name=narG2;gbkey=Gene;gene=narG2;gene_biotype=protein_coding;gene_synonym=narG2;locus_tag=SCO0216
NC_003888.3	RefSeq	CDS	206480	210181	.	+	0	ID=cds192;Parent=gene203;Dbxref=Genbank:NP_624549.1,GeneID:1095640;Name=NP_624549.1;Note=SCJ12.28%2C narG2%2C probable nitrate reductase alpha chain%2C len: 1233 aa. Highly similar to Streptomyces coelicolor TR:O86717 (EMBL%3B AL031515) nitrate reductase alpha chain NarG SC5C7.20c (1231 aa)%2C fasta scores: opt: 5792 z-score: 6544.7 E(): 0 67.6%25 identity in 1230 aa overlap and Bacillus subtilis SW:NARG_BACSU (EMBL%3B Z49884) nitrate reductase alpha chain (EC 1.7.99.4) NarG (1228 aa)%2C fasta scores: opt: 4331 z-score: 4891.8 E(): 0 52.9%25 identity in 1201 aa overlap. Contains a PS00551 Prokaryotic molybdopterin oxidoreductases signature 1%2C a Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases and a Pfam match to entry PF01568 Molydop_binding%2C Prokaryotic molybdopterin oxidoreductases.;gbkey=CDS;gene=narG2;product=nitrate reductase subunit alpha NarG2;protein_id=NP_624549.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	206663	206719	.	+	.	ID=id201;Dbxref=GeneID:1095640;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1;gbkey=misc_feature;gene=narG2
NC_003888.3	RefSeq	sequence_feature	208772	208963	.	+	.	ID=id202;Dbxref=GeneID:1095640;Note=Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 92.80%2C E-value 2.7e-29;gbkey=misc_feature;gene=narG2
NC_003888.3	RefSeq	sequence_feature	209735	210100	.	+	.	ID=id203;Dbxref=GeneID:1095640;Note=Pfam match to entry PF01568 Molydop_binding%2C Prokaryotic molybdopterin oxidoreductases%2C score 130.00%2C E-value 4.3e-35;gbkey=misc_feature;gene=narG2
NC_003888.3	RefSeq	gene	210183	211751	.	+	.	ID=gene204;Dbxref=GeneID:1095641;Name=narH2;gbkey=Gene;gene=narH2;gene_biotype=protein_coding;gene_synonym=narH2;locus_tag=SCO0217
NC_003888.3	RefSeq	CDS	210183	211751	.	+	0	ID=cds193;Parent=gene204;Dbxref=Genbank:NP_624550.1,GeneID:1095641;Name=NP_624550.1;Note=SCJ12.29%2C narH2%2C probable nitrate reductase beta chain%2C len: 522 aa. Highly similar to many e.g. Streptomyces coelicolor TR:O86716 (EMBL%3B AL031515) nitrate reductase beta chain NarH SC5C7.19c (531 aa)%2C fasta scores: opt: 2348 z-score: 2413.0 E(): opt: 2348 z-score: 2413.0 E(): 0 65.3%25 identity in 496 aa overlap and Bacillus subtilis SW:NARH_BACSU (EMBL%3B Z49884) nitrate reductase beta chain (EC 1.7.99.4) NarH (487 aa)%2C fasta scores: opt: 2081 z-score: 2139.7 E(): 0 57.1%25 identity in 485 aa overlap. Contains a PS00190 Cytochrome c family heme-binding site signature%2C a Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains and a Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.;gbkey=CDS;gene=narH2;product=nitrate reductase subunit beta NarH2;protein_id=NP_624550.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	210231	210284	.	+	.	ID=id204;Dbxref=GeneID:1095641;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 9.00%2C E-value 0.23;gbkey=misc_feature;gene=narH2
NC_003888.3	RefSeq	sequence_feature	210252	210269	.	+	.	ID=id205;Dbxref=GeneID:1095641;Note=PS00190 Cytochrome c family heme-binding site signature;gbkey=misc_feature;gene=narH2
NC_003888.3	RefSeq	sequence_feature	210732	210908	.	+	.	ID=id206;Dbxref=GeneID:1095641;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 63.40%2C E-value 2.9e-17;gbkey=misc_feature;gene=narH2
NC_003888.3	RefSeq	gene	211748	212551	.	+	.	ID=gene205;Dbxref=GeneID:1095642;Name=narJ2;gbkey=Gene;gene=narJ2;gene_biotype=protein_coding;gene_synonym=narJ2;locus_tag=SCO0218
NC_003888.3	RefSeq	CDS	211748	212551	.	+	0	ID=cds194;Parent=gene205;Dbxref=Genbank:NP_624551.1,GeneID:1095642;Name=NP_624551.1;Note=SCJ12.30%2C narJ2%2C probable nitrate reductase delta chain%2C len: 267 aa. Similar to many e.g. Bacillus subtilis SW:NARJ_BACSU (EMBL:Z49884) nitrate reductase delta chain NarJ (EC 1.7.99.4) SC5C7.18c (184 aa)%2C fasta scores: opt: 287 z-score: 314.9 E(): 3.5e-10 32.9%25 identity in 164 aa overlap and Streptomyces coelicolor TR:O86715 (EMBL:AL031515) nitrate reductase delta chain SC5C7.18c (164 aa)%2C fasta scores: opt: 309 z-score: 338.8 E(): 1.6e-11 40.1%25 identity in 172 aa overlap.;gbkey=CDS;gene=narJ2;product=nitrate reductase subunit delta NarJ2;protein_id=NP_624551.1;transl_table=11
NC_003888.3	RefSeq	gene	212551	213321	.	+	.	ID=gene206;Dbxref=GeneID:1095643;Name=narI2;gbkey=Gene;gene=narI2;gene_biotype=protein_coding;gene_synonym=narI2;locus_tag=SCO0219
NC_003888.3	RefSeq	CDS	212551	213321	.	+	0	ID=cds195;Parent=gene206;Dbxref=Genbank:NP_624552.1,GeneID:1095643;Name=NP_624552.1;Note=SCJ12.31%2C narI2%2C possible nitrate reductase gamma chain%2C len: 256 aa. Similar to many including: Streptomyces coelicolor TR:O86714 (EMBL:AL031515) nitrate reductase gamma chain NarI SC5C7.17c (240 aa)%2C fasta scores: opt: 755 z-score: 891.5 E(): 0 46.8%25 identity in 235 aa overlap and Bacillus subtilis SW:NARI_BACSU (EMBL:Z49884) nitrate reductase gamma chain (EC 1.7.99.4) (223 aa)%2C fasta scores: opt: 668 z-score: 790.4 E(): 0 43.6%25 identity in 225 aa overlap. Contains possible membrane spanning hydrophobic domains;gbkey=CDS;gene=narI2;product=nitrate reductase subunit delta NarI2;protein_id=NP_624552.1;transl_table=11
NC_003888.3	RefSeq	gene	213427	213870	.	+	.	ID=gene207;Dbxref=GeneID:1095644;Name=SCJ12.32;gbkey=Gene;gene=SCJ12.32;gene_biotype=protein_coding;gene_synonym=SCJ12.32;locus_tag=SCO0220
NC_003888.3	RefSeq	CDS	213427	213870	.	+	0	ID=cds196;Parent=gene207;Dbxref=Genbank:NP_624553.1,GeneID:1095644;Name=NP_624553.1;Note=SCJ12.32%2C unknown%2C len: 147 aa.;gbkey=CDS;gene=SCJ12.32;product=hypothetical protein;protein_id=NP_624553.1;transl_table=11
NC_003888.3	RefSeq	gene	213895	214553	.	-	.	ID=gene208;Dbxref=GeneID:1095645;Name=SCJ12.33c;gbkey=Gene;gene=SCJ12.33c;gene_biotype=pseudogene;gene_synonym=SCJ12.33c;locus_tag=SCO0221;pseudo=true
NC_003888.3	RefSeq	sequence_feature	213895	214553	.	-	.	ID=id207;Dbxref=GeneID:1095645;Note=SCJ12.33c%2C transposase pseudogene. Similar to Streptomyces coelicolor SW:CAB45030 (EMBL:AL078635) transposase (fragment) (142 aa)%3Btransposase (pseudogene);gbkey=misc_feature;gene=SCJ12.33c;partial=true
NC_003888.3	RefSeq	ribosome_entry_site	214431	214435	.	-	.	ID=id208;Dbxref=GeneID:1095645;gbkey=RBS;gene=SCJ12.33c
NC_003888.3	RefSeq	gene	214913	215446	.	+	.	ID=gene209;Dbxref=GeneID:1095646;Name=SCJ9A.01;gbkey=Gene;gene=SCJ9A.01;gene_biotype=protein_coding;gene_synonym=SCJ9A.01;locus_tag=SCO0222
NC_003888.3	RefSeq	CDS	214913	215446	.	+	0	ID=cds197;Parent=gene209;Dbxref=Genbank:NP_624554.1,GeneID:1095646;Name=NP_624554.1;Note=SCJ9A.01%2C possible acetyltransferase%2C len: 177 aa%3B similar to many e.g. TR:Q53796 (EMBL:L26955) bleomycin acetyltransferase from Streptomyces verticillus (301 aa) fasta scores%3B opt: 150%2C z-score: 190.2%2C E(): 0.0031%2C (30.8%25 identity in 169 aa overlap). Also similar to TR:CAB44535 (EMBL:AL078618) acetyltransferase from Streptomyces coelicolor (187 aa) fasta scores%3B opt: 215%2C z-score: 271.9%2C E(): 8.8e-08%2C (34.2%25 identity in 146 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCJ9A.01;product=acetyltransferase;protein_id=NP_624554.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	214943	215365	.	+	.	ID=id209;Dbxref=GeneID:1095646;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 23.40%2C E-value 0.0053.;gbkey=misc_feature;gene=SCJ9A.01
NC_003888.3	RefSeq	gene	215443	215559	.	+	.	ID=gene210;Dbxref=GeneID:1095647;Name=SCJ9A.02;gbkey=Gene;gene=SCJ9A.02;gene_biotype=protein_coding;gene_synonym=SCJ9A.02;locus_tag=SCO0223
NC_003888.3	RefSeq	CDS	215443	215559	.	+	0	ID=cds198;Parent=gene210;Dbxref=Genbank:NP_624555.1,GeneID:1095647;Name=NP_624555.1;Note=SCJ9A.02%2C improbable CDS%2C function unknown%2C len: 38aa%3B predicted by Hidden Markov Model and amino acid usage.;gbkey=CDS;gene=SCJ9A.02;product=hypothetical protein;protein_id=NP_624555.1;transl_table=11
NC_003888.3	RefSeq	gene	215807	216844	.	-	.	ID=gene211;Dbxref=GeneID:1095648;Name=SCJ9A.03c;gbkey=Gene;gene=SCJ9A.03c;gene_biotype=protein_coding;gene_synonym=SCJ9A.03c;locus_tag=SCO0224
NC_003888.3	RefSeq	CDS	215807	216844	.	-	0	ID=cds199;Parent=gene211;Dbxref=Genbank:NP_624556.1,GeneID:1095648;Name=NP_624556.1;Note=SCJ9A.03c%2C unknown%2C len: 345aa%3B similar to TR:CAB45045 (EMBL:AL078635) hypothetical protein from Amycolatopsis orientalis (353 aa) fasta scores%3B opt: 1018%2C z-score: 1095.3%2C E(): 0%2C (47.3%25 identity in 355 aa overlap).;gbkey=CDS;gene=SCJ9A.03c;product=hypothetical protein;protein_id=NP_624556.1;transl_table=11
NC_003888.3	RefSeq	gene	216834	217268	.	-	.	ID=gene212;Dbxref=GeneID:1095649;Name=SCJ9A.04c;gbkey=Gene;gene=SCJ9A.04c;gene_biotype=protein_coding;gene_synonym=SCJ9A.04c;locus_tag=SCO0225
NC_003888.3	RefSeq	CDS	216834	217268	.	-	0	ID=cds200;Parent=gene212;Dbxref=Genbank:NP_624557.1,GeneID:1095649;Name=NP_624557.1;Note=SCJ9A.04c%2C unknown%2C len: 144aa%3B predicted by amino acid usage.;gbkey=CDS;gene=SCJ9A.04c;product=hypothetical protein;protein_id=NP_624557.1;transl_table=11
NC_003888.3	RefSeq	gene	217315	218019	.	-	.	ID=gene213;Dbxref=GeneID:1095650;Name=SCJ9A.05c;gbkey=Gene;gene=SCJ9A.05c;gene_biotype=protein_coding;gene_synonym=SCJ9A.05c;locus_tag=SCO0226
NC_003888.3	RefSeq	CDS	217315	218019	.	-	0	ID=cds201;Parent=gene213;Dbxref=Genbank:NP_624558.1,GeneID:1095650;Name=NP_624558.1;Note=SCJ9A.05c%2C possible membrane protein%2C len: 234aa%3B contains possible peripheral membrane hydrophobic region.;gbkey=CDS;gene=SCJ9A.05c;product=hypothetical protein;protein_id=NP_624558.1;transl_table=11
NC_003888.3	RefSeq	gene	218418	218780	.	-	.	ID=gene214;Dbxref=GeneID:1095651;Name=SCJ9A.06c;gbkey=Gene;gene=SCJ9A.06c;gene_biotype=protein_coding;gene_synonym=SCJ9A.06c;locus_tag=SCO0227
NC_003888.3	RefSeq	CDS	218418	218780	.	-	0	ID=cds202;Parent=gene214;Dbxref=Genbank:NP_624559.1,GeneID:1095651;Name=NP_624559.1;Note=SCJ9A.06c%2C unknown%2C len: 120aa%3B predicted by GC Frameplot and amino acid usage.;gbkey=CDS;gene=SCJ9A.06c;product=hypothetical protein;protein_id=NP_624559.1;transl_table=11
NC_003888.3	RefSeq	gene	218973	219059	.	+	.	ID=gene215;Dbxref=GeneID:1095652;Name=SCJ9A.07;gbkey=Gene;gene=SCJ9A.07;gene_biotype=protein_coding;gene_synonym=SCJ9A.07;locus_tag=SCO0228
NC_003888.3	RefSeq	CDS	218973	219059	.	+	0	ID=cds203;Parent=gene215;Dbxref=Genbank:NP_624560.1,GeneID:1095652;Name=NP_624560.1;Note=SCJ9A.07%2C unknown%2C len: 28aa%3B predicted by GC Frameplot and amino acid usage.;gbkey=CDS;gene=SCJ9A.07;product=hypothetical protein;protein_id=NP_624560.1;transl_table=11
NC_003888.3	RefSeq	gene	219302	220150	.	+	.	ID=gene216;Dbxref=GeneID:1095653;Name=SCJ9A.08;gbkey=Gene;gene=SCJ9A.08;gene_biotype=protein_coding;gene_synonym=SCJ9A.08;locus_tag=SCO0229
NC_003888.3	RefSeq	CDS	219302	220150	.	+	0	ID=cds204;Parent=gene216;Dbxref=Genbank:NP_624561.1,GeneID:1095653;Name=NP_624561.1;Note=SCJ9A.08%2C probable oxidoreductase (hypothetical protein)%2C len: 282 aa%3B similar to many e.g. TR:CAB51136 (EMBL:Y18817) oxidoreductase of short chain from Streptomyces coelicolor (276 aa) fasta scores%3B opt: 615%2C z-score: 697.7%2C E(): 1.7e-31%2C (40.9%25 identity in 274 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCJ9A.08;product=short chain dehydrogenase;protein_id=NP_624561.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	219311	219856	.	+	.	ID=id210;Dbxref=GeneID:1095653;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 179.90%2C E-value 4e-50;gbkey=misc_feature;gene=SCJ9A.08
NC_003888.3	RefSeq	sequence_feature	219707	219793	.	+	.	ID=id211;Dbxref=GeneID:1095653;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SCJ9A.08
NC_003888.3	RefSeq	gene	220150	220764	.	+	.	ID=gene217;Dbxref=GeneID:1095654;Name=SCJ9A.09;gbkey=Gene;gene=SCJ9A.09;gene_biotype=protein_coding;gene_synonym=SCJ9A.09;locus_tag=SCO0230
NC_003888.3	RefSeq	CDS	220150	220764	.	+	0	ID=cds205;Parent=gene217;Dbxref=Genbank:NP_624562.1,GeneID:1095654;Name=NP_624562.1;Note=SCJ9A.09%2C possible tetR-family transcriptional regulator%2C len: 204 aa%3B similar to many proposed regulators and hypothetical proteins e.g. TR:CAB46789 (EMBL:AL096811) tetR transcriptional regulator from Streptomyces coelicolor (251 aa) fasta scores%3B opt: 194%2C z-score: 252.1%2C E(): 1.1e-06%2C (35.3%25 identity in 102 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and Prosite match to PS01081 Bacterial regulatory proteins%2C tetR family signature. Also contains possible helix-turn-helix motif (+3.50 SD) 41-62 aa;gbkey=CDS;gene=SCJ9A.09;product=TetR family transcriptional regulator;protein_id=NP_624562.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	220219	220359	.	+	.	ID=id212;Dbxref=GeneID:1095654;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 47.10%2C E-value 2.4e-11;gbkey=misc_feature;gene=SCJ9A.09
NC_003888.3	RefSeq	sequence_feature	220255	220347	.	+	.	ID=id213;Dbxref=GeneID:1095654;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature;gbkey=misc_feature;gene=SCJ9A.09
NC_003888.3	RefSeq	gene	221092	221247	.	-	.	ID=gene218;Dbxref=GeneID:1095655;Name=SCJ9A.10c;gbkey=Gene;gene=SCJ9A.10c;gene_biotype=protein_coding;gene_synonym=SCJ9A.10c;locus_tag=SCO0231
NC_003888.3	RefSeq	CDS	221092	221247	.	-	0	ID=cds206;Parent=gene218;Dbxref=Genbank:NP_624563.1,GeneID:1095655;Name=NP_624563.1;Note=SCJ9A.10c%2C small hydrophobic protein%2C function unknown%2C len: 51 aa%3B predicted by GC Frameplot%2C Hidden Markov Model and amino acid usage. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCJ9A.10c;product=hypothetical protein;protein_id=NP_624563.1;transl_table=11
NC_003888.3	RefSeq	gene	221414	221599	.	-	.	ID=gene219;Dbxref=GeneID:1095656;Name=SCJ9A.11c;gbkey=Gene;gene=SCJ9A.11c;gene_biotype=protein_coding;gene_synonym=SCJ9A.11c;locus_tag=SCO0232
NC_003888.3	RefSeq	CDS	221414	221599	.	-	0	ID=cds207;Parent=gene219;Dbxref=Genbank:NP_624564.1,GeneID:1095656;Name=NP_624564.1;Note=SCJ9A.11c%2C unknown%2C len: 61aa%3B predicted by GC Frameplot%2C Hidden Markov Model and amino acid usage. Similar to a region of several aldolases eg. TR:AAB40121 (EMBL:U70664) from Haloferax sp. (215 aa) fasta scores%3B opt: 140%2C z-score: 198.7%2C E(): 0.0011%2C (49.0%25 identity in 51 aa overlap).;gbkey=CDS;gene=SCJ9A.11c;product=hypothetical protein;protein_id=NP_624564.1;transl_table=11
NC_003888.3	RefSeq	gene	221699	222538	.	-	.	ID=gene220;Dbxref=GeneID:1095657;Name=SCJ9A.12c;gbkey=Gene;gene=SCJ9A.12c;gene_biotype=protein_coding;gene_synonym=SCJ9A.12c;locus_tag=SCO0233
NC_003888.3	RefSeq	CDS	221699	222538	.	-	0	ID=cds208;Parent=gene220;Dbxref=Genbank:NP_624565.1,GeneID:1095657;Name=NP_624565.1;Note=SCJ9A.12c%2C possible DNA-binding protein%2C len: 279 aa%3B N-terminal similar to TR:O86721 (EMBL:AL031515) hypothetical protein from Streptomyces coelicolor (272 aa) fasta scores%3B opt: 135%2C z-score: 165.1%2C E(): 0.079%2C (29.3%25 identity in 150 aa overlap). Contains possible helix-turn-helix motif (+3.31 SD) 37-58 aa;gbkey=CDS;gene=SCJ9A.12c;product=DNA-binding protein;protein_id=NP_624565.1;transl_table=11
NC_003888.3	RefSeq	gene	222827	223288	.	+	.	ID=gene221;Dbxref=GeneID:1095658;Name=SCJ9A.13;gbkey=Gene;gene=SCJ9A.13;gene_biotype=protein_coding;gene_synonym=SCJ9A.13;locus_tag=SCO0234
NC_003888.3	RefSeq	CDS	222827	223288	.	+	0	ID=cds209;Parent=gene221;Dbxref=Genbank:NP_624566.1,GeneID:1095658;Name=NP_624566.1;Note=SCJ9A.13%2C probable oxidoreductase%2C len: 153aa%3B similar to many eg. SW:DHG_BACME glucose dehydrogenase from Bacillus megaterium (261 aa) fasta scores%3B opt: 252%2C z-score: 277.8%2C E(): 4.1e-08%2C (44.0%25 identity in 100 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=SCJ9A.13;product=oxidoreductase;protein_id=NP_624566.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	222845	223273	.	+	.	ID=id214;Dbxref=GeneID:1095658;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 13.80%2C E-value 1.7e-06;gbkey=misc_feature;gene=SCJ9A.13
NC_003888.3	RefSeq	gene	223294	224232	.	+	.	ID=gene222;Dbxref=GeneID:1095659;Name=SCJ9A.14;gbkey=Gene;gene=SCJ9A.14;gene_biotype=protein_coding;gene_synonym=SCJ9A.14;locus_tag=SCO0235
NC_003888.3	RefSeq	CDS	223294	224232	.	+	0	ID=cds210;Parent=gene222;Dbxref=Genbank:NP_624567.1,GeneID:1095659;Name=NP_624567.1;Note=SCJ9A.14%2C possible oxidoreductase%2C len: 312 aa%3B similar to many proposed oxidoreductases e.g. TR:O53537 (EMBL:AL021925)  oxidoreductase from Mycobacterium tuberculosis (317 aa) fasta scores%3B opt: 988%2C z-score: 1030.4%2C E(): 0%2C (52.6%25 identity in 304 aa overlap). Also similar to SCJ9A.19c five CDSs downstream (311 aa) fasta scores%3B opt: 433%2C z-score: 409.8%2C E(): 1.4e-17%2C (38.0%25 identity in 300 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=SCJ9A.14;product=short chain dehydrogenase;protein_id=NP_624567.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	223339	223935	.	+	.	ID=id215;Dbxref=GeneID:1095659;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 50.30%2C E-value 4.2e-11;gbkey=misc_feature;gene=SCJ9A.14
NC_003888.3	RefSeq	gene	224404	225276	.	-	.	ID=gene223;Dbxref=GeneID:1095660;Name=SCJ9A.15c;gbkey=Gene;gene=SCJ9A.15c;gene_biotype=protein_coding;gene_synonym=SCJ9A.15c;locus_tag=SCO0236
NC_003888.3	RefSeq	CDS	224404	225276	.	-	0	ID=cds211;Parent=gene223;Dbxref=Genbank:NP_624568.1,GeneID:1095660;Name=NP_624568.1;Note=SCJ9A.15c%2C possible DNA-binding protein%2C len: 290 aa%3B prediction based on GC Frameplot%2C Hidden Markov Model and amino acid usage. Similar to TR:CAC44562 (EMBL:AL596144) Streptomyces coelicolor  DNA-binding protein SCBAC12C8.07c%2C 284 aa%3B fasta scores: opt: 636 Z-score: 730.2 E(): 4.9e-33%3B 43.060%25 identity in 281 aa overlap. Contains possible helix-turn-helix motif (+3.31 SD) residues 39-60;gbkey=CDS;gene=SCJ9A.15c;product=DNA-binding protein;protein_id=NP_624568.1;transl_table=11
NC_003888.3	RefSeq	gene	225476	226237	.	+	.	ID=gene224;Dbxref=GeneID:1095661;Name=SCJ9A.16;gbkey=Gene;gene=SCJ9A.16;gene_biotype=protein_coding;gene_synonym=SCJ9A.16;locus_tag=SCO0237
NC_003888.3	RefSeq	CDS	225476	226237	.	+	0	ID=cds212;Parent=gene224;Dbxref=Genbank:NP_624569.1,GeneID:1095661;Name=NP_624569.1;Note=SCJ9A.16%2C possible oxidoreductase%2C len: 253 aa%3B similar to many proposed oxidoreductases e.g. SW:DLTE_BACSU from Bacillus subtilis (252 aa) fasta scores%3B opt: 368%2C z-score: 429.4%2C E(): 1.5e-16%2C (33.2%25 identity in 205 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCJ9A.16;product=oxidoreductase;protein_id=NP_624569.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	225491	226030	.	+	.	ID=id216;Dbxref=GeneID:1095661;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 128.20%2C E-value 1.6e-34;gbkey=misc_feature;gene=SCJ9A.16
NC_003888.3	RefSeq	sequence_feature	225881	225967	.	+	.	ID=id217;Dbxref=GeneID:1095661;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SCJ9A.16
NC_003888.3	RefSeq	gene	226481	227008	.	+	.	ID=gene225;Dbxref=GeneID:1095662;Name=SCJ9A.17;gbkey=Gene;gene=SCJ9A.17;gene_biotype=protein_coding;gene_synonym=SCJ9A.17;locus_tag=SCO0238
NC_003888.3	RefSeq	CDS	226481	227008	.	+	0	ID=cds213;Parent=gene225;Dbxref=Genbank:NP_624570.1,GeneID:1095662;Name=NP_624570.1;Note=SCJ9A.17%2C hypothetical protein%2C len: 175 aa%3B similar to TR:Q9RI91 (EMBL:AL109949) Streptomyces coelicolor hypothetical protein SCJ11.13%2C 152 aa%3B fasta scores: opt: 683 Z-score: 798.0 E(): 8.1e-37%3B 68.421%25 identity in 152 aa overlap;gbkey=CDS;gene=SCJ9A.17;product=hypothetical protein;protein_id=NP_624570.1;transl_table=11
NC_003888.3	RefSeq	gene	227081	228154	.	-	.	ID=gene226;Dbxref=GeneID:1095663;Name=SCJ9A.18c;gbkey=Gene;gene=SCJ9A.18c;gene_biotype=protein_coding;gene_synonym=SCJ9A.18c;locus_tag=SCO0239
NC_003888.3	RefSeq	CDS	227081	228154	.	-	0	ID=cds214;Parent=gene226;Dbxref=Genbank:NP_624571.1,GeneID:1095663;Name=NP_624571.1;Note=SCJ9A.18c%2C unknown%2C len: 357aa;gbkey=CDS;gene=SCJ9A.18c;product=hypothetical protein;protein_id=NP_624571.1;transl_table=11
NC_003888.3	RefSeq	gene	228714	229649	.	-	.	ID=gene227;Dbxref=GeneID:1095664;Name=SCJ9A.19c;gbkey=Gene;gene=SCJ9A.19c;gene_biotype=protein_coding;gene_synonym=SCJ9A.19c;locus_tag=SCO0240
NC_003888.3	RefSeq	CDS	228714	229649	.	-	0	ID=cds215;Parent=gene227;Dbxref=Genbank:NP_624572.1,GeneID:1095664;Name=NP_624572.1;Note=SCJ9A.19c%2C possible oxidoreductase%2C len: 311aa%3B similar to many proposed oxidoreductases eg. TR:O53613 (EMBL:AL021428)  oxidoreductase from Mycobacterium tuberculosis (303 aa) fasta scores%3B opt: 746%2C z-score: 814.7%2C E(): 0%2C (43.0%25 identity in 305 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=SCJ9A.19c;product=oxidoreductase;protein_id=NP_624572.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	229008	229598	.	-	.	ID=id218;Dbxref=GeneID:1095664;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 91.90%2C E-value 1.3e-23;gbkey=misc_feature;gene=SCJ9A.19c
NC_003888.3	RefSeq	gene	229995	230669	.	+	.	ID=gene228;Dbxref=GeneID:1095665;Name=SCJ9A.20;gbkey=Gene;gene=SCJ9A.20;gene_biotype=protein_coding;gene_synonym=SCJ9A.20;locus_tag=SCO0241
NC_003888.3	RefSeq	CDS	229995	230669	.	+	0	ID=cds216;Parent=gene228;Dbxref=Genbank:NP_624573.1,GeneID:1095665;Name=NP_624573.1;Note=SCJ9A.20%2C possible transcriptional regulator%2C len: 224aa%3B similar to many proposed transcriptional regulators eg. TR:O53737 (EMBL:AL021932) transcriptional regulator from Streptomyces coelicolor (236 aa) fasta scores%3B opt: 308%2C z-score: 371.4%2C E(): 2.5e-13%2C (30.3%25 identity in 221 aa overlap). Contains possible helix-turn-helix motif (+3.83 SD) 37-58 aa;gbkey=CDS;gene=SCJ9A.20;product=transcriptional regulator;protein_id=NP_624573.1;transl_table=11
NC_003888.3	RefSeq	gene	231022	231465	.	+	.	ID=gene229;Dbxref=GeneID:1095666;Name=SCJ9A.21;gbkey=Gene;gene=SCJ9A.21;gene_biotype=protein_coding;gene_synonym=SCJ9A.21;locus_tag=SCO0242
NC_003888.3	RefSeq	CDS	231022	231465	.	+	0	ID=cds217;Parent=gene229;Dbxref=Genbank:NP_624574.1,GeneID:1095666;Name=NP_624574.1;Note=SCJ9A.21%2C unknown%2C len: 147aa%3B similar to TR:Q98JA0 (EMBL:AP002998) MLR2034 protein from Rhizobium loti (Mesorhizobium loti) (145 aa) fasta scores%3B opt: 334%2C Z-score: 400.1%2C E(): 1.2e-14%2C 37.324%25 identity (37.324%25 ungapped) in 142 aa overlap. Weak similarity to SW:YAER_ECOLI hypothetical protein from Escherichia coli (129 aa) fasta scores%3B opt: 105%2C z-score: 139.5%2C E(): 2.1%2C (25.0%25 identity in 148 aa overlap).;gbkey=CDS;gene=SCJ9A.21;product=hypothetical protein;protein_id=NP_624574.1;transl_table=11
NC_003888.3	RefSeq	gene	231475	231654	.	+	.	ID=gene230;Dbxref=GeneID:1095667;Name=SCJ9A.22;gbkey=Gene;gene=SCJ9A.22;gene_biotype=protein_coding;gene_synonym=SCJ9A.22;locus_tag=SCO0243
NC_003888.3	RefSeq	CDS	231475	231654	.	+	0	ID=cds218;Parent=gene230;Dbxref=Genbank:NP_624575.1,GeneID:1095667;Name=NP_624575.1;Note=SCJ9A.22%2C unknown%2C len: 59aa;gbkey=CDS;gene=SCJ9A.22;product=hypothetical protein;protein_id=NP_624575.1;transl_table=11
NC_003888.3	RefSeq	gene	232508	233518	.	+	.	ID=gene231;Dbxref=GeneID:1095668;Name=SCJ9A.23;gbkey=Gene;gene=SCJ9A.23;gene_biotype=protein_coding;gene_synonym=SCJ9A.23;locus_tag=SCO0244
NC_003888.3	RefSeq	CDS	232508	233518	.	+	0	ID=cds219;Parent=gene231;Dbxref=Genbank:NP_624576.1,GeneID:1095668;Name=NP_624576.1;Note=SCJ9A.23%2C hypothetical protein%2C len: 336 aa%3B similar to TR:O88063 (EMBL:AL031541) hypothetical protein from Streptomyces coelicolor (322 aa) fasta scores%3B opt: 852%2C z-score: 891.5%2C E(): 0%2C (51.9%25 identity in 320 aa overlap);gbkey=CDS;gene=SCJ9A.23;product=hypothetical protein;protein_id=NP_624576.1;transl_table=11
NC_003888.3	RefSeq	gene	233854	234873	.	-	.	ID=gene232;Dbxref=GeneID:1095669;Name=SCJ9A.24c;gbkey=Gene;gene=SCJ9A.24c;gene_biotype=protein_coding;gene_synonym=SCJ9A.24c;locus_tag=SCO0245
NC_003888.3	RefSeq	CDS	233854	234873	.	-	0	ID=cds220;Parent=gene232;Dbxref=Genbank:NP_624577.1,GeneID:1095669;Name=NP_624577.1;Note=SCJ9A.24c%2C possible integral membrane protein%2C len: 339aa%3B similar to many hypothetical proteins eg. SW:Y0D3_MYCTU from Mycobacterium tuberculosis (345 aa) fasta scores%3B opt: 598%2C z-score: 676.4%2C E(): 2.6e-30%2C (34.2%25 identity in 333 aa overlap). Contains two Pfam matches to entry PF00571 CBS%2C CBS domain and a Pfam match to entry PF01595 DUF21. Also contains possible membrane spanning hydrophobic regions in the N-terminal region.;gbkey=CDS;gene=SCJ9A.24c;product=hypothetical protein;protein_id=NP_624577.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	233872	234033	.	-	.	ID=id219;Dbxref=GeneID:1095669;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 32.00%2C E-value 1.3e-05;gbkey=misc_feature;gene=SCJ9A.24c
NC_003888.3	RefSeq	sequence_feature	234055	234213	.	-	.	ID=id220;Dbxref=GeneID:1095669;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 11.60%2C E-value 1.3;gbkey=misc_feature;gene=SCJ9A.24c
NC_003888.3	RefSeq	sequence_feature	234247	234864	.	-	.	ID=id221;Dbxref=GeneID:1095669;Note=Pfam match to entry PF01595 DUF21%2C %2C score 143.20%2C E-value 4.6e-39;gbkey=misc_feature;gene=SCJ9A.24c
NC_003888.3	RefSeq	gene	234870	236207	.	-	.	ID=gene233;Dbxref=GeneID:1095670;Name=SCJ9A.25c;gbkey=Gene;gene=SCJ9A.25c;gene_biotype=protein_coding;gene_synonym=SCJ9A.25c;locus_tag=SCO0246
NC_003888.3	RefSeq	CDS	234870	236207	.	-	0	ID=cds221;Parent=gene233;Dbxref=Genbank:NP_624578.1,GeneID:1095670;Name=NP_624578.1;Note=SCJ9A.25c%2C possible integral membrane protein%2C len: 445aa%3B similar to many hypothetical proteins eg. SW:Y0D2_MYCTU from Mycobacterium tuberculosis (455 aa) fasta scores%3B opt: 925%2C z-score: 997.3%2C E(): 0%2C (39.4%25 identity in 411 aa overlap). Contains two Pfam matches to entry PF00571 CBS%2C CBS domain and a Pfam match to entry PF01595 DUF21. Also contains possible membrane spanning hydrophobic regions in the N-terminal region.;gbkey=CDS;gene=SCJ9A.25c;product=hypothetical protein;protein_id=NP_624578.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	235188	235349	.	-	.	ID=id222;Dbxref=GeneID:1095670;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 12.70%2C E-value 0.94;gbkey=misc_feature;gene=SCJ9A.25c
NC_003888.3	RefSeq	sequence_feature	235374	235538	.	-	.	ID=id223;Dbxref=GeneID:1095670;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 21.90%2C E-value 0.015;gbkey=misc_feature;gene=SCJ9A.25c
NC_003888.3	RefSeq	sequence_feature	235572	236189	.	-	.	ID=id224;Dbxref=GeneID:1095670;Note=Pfam match to entry PF01595 DUF21%2C %2C score 156.50%2C E-value 4.5e-43;gbkey=misc_feature;gene=SCJ9A.25c
NC_003888.3	RefSeq	gene	236782	237807	.	+	.	ID=gene234;Dbxref=GeneID:1095671;Name=SCJ9A.26;gbkey=Gene;gene=SCJ9A.26;gene_biotype=protein_coding;gene_synonym=SCJ9A.26;locus_tag=SCO0247
NC_003888.3	RefSeq	CDS	236782	237807	.	+	0	ID=cds222;Parent=gene234;Dbxref=Genbank:NP_624579.1,GeneID:1095671;Name=NP_624579.1;Note=SCJ9A.26%2C unknown%2C possibly membrane associated%2C len: 341aa%3B similar to TR:P71088 (EMBL:Z82044) hypothetical protein from Bacillus subtilis (258 aa) fasta scores%3B opt: 452%2C z-score: 475.1%2C E(): 4.2e-19%2C (36.6%25 identity in 262 aa overlap). Also similar to TR:CAB45285 (EMBL:AL079332) hypothetical protein from Streptomyces coelicolor (195 aa) fasta scores%3B opt: 572%2C z-score: 600.1%2C E(): 4.6e-26%2C (50.0%25 identity in 184 aa overlap). Contains possible membrane spanning hydrophobic region.;gbkey=CDS;gene=SCJ9A.26;product=hypothetical protein;protein_id=NP_624579.1;transl_table=11
NC_003888.3	RefSeq	gene	237664	238251	.	-	.	ID=gene235;Dbxref=GeneID:1095672;Name=SCJ9A.27c;gbkey=Gene;gene=SCJ9A.27c;gene_biotype=protein_coding;gene_synonym=SCJ9A.27c;locus_tag=SCO0248
NC_003888.3	RefSeq	CDS	237664	238251	.	-	0	ID=cds223;Parent=gene235;Dbxref=Genbank:NP_624580.1,GeneID:1095672;Name=NP_624580.1;Note=SCJ9A.27c%2C unknown%2C len: 195aa%3B prediction based on Hidden Markov Model and amino acid usage.;gbkey=CDS;gene=SCJ9A.27c;product=hypothetical protein;protein_id=NP_624580.1;transl_table=11
NC_003888.3	RefSeq	gene	238280	239794	.	-	.	ID=gene236;Dbxref=GeneID:1095673;Name=SCJ9A.28c;gbkey=Gene;gene=SCJ9A.28c;gene_biotype=protein_coding;gene_synonym=SCJ9A.28c;locus_tag=SCO0249
NC_003888.3	RefSeq	CDS	238280	239794	.	-	0	ID=cds224;Parent=gene236;Dbxref=Genbank:NP_624581.1,GeneID:1095673;Name=NP_624581.1;Note=SCJ9A.28c%2C possible monooxygenase%2C len: 504 aa%3B similar to many e.g. TR:Q9ZGM8 (EMBL:AF077869) oxygenase involved in the last step of mithramycin biosynthesis in Streptomyces argillaceus (533 aa) fasta scores%3B opt: 1215%2C z-score: 1311.5%2C E(): 0%2C (45.0%25 identity in 513 aa overlap). Contains Pfam matches to entry PF01360 Monooxygenase%2C Monooxygenase and Pfam match to entry PF01494 FAD_binding_3%2C and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible uncleavable N-terminal signal sequence.;gbkey=CDS;gene=SCJ9A.28c;product=hypothetical protein;protein_id=NP_624581.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	238784	239353	.	-	.	ID=id225;Dbxref=GeneID:1095673;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 166.60%2C E-value 4.2e-46;gbkey=misc_feature;gene=SCJ9A.28c
NC_003888.3	RefSeq	sequence_feature	239378	239782	.	-	.	ID=id226;Dbxref=GeneID:1095673;Note=Pfam match to entry PF01494 FAD_binding_3%2C %2C score 137.20%2C E-value 2.9e-37;gbkey=misc_feature;gene=SCJ9A.28c
NC_003888.3	RefSeq	sequence_feature	239738	239770	.	-	.	ID=id227;Dbxref=GeneID:1095673;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCJ9A.28c
NC_003888.3	RefSeq	sequence_feature	239811	239816	.	+	.	ID=id228;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	239811	239816	.	-	.	ID=id229;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	239858	240523	.	+	.	ID=gene237;Dbxref=GeneID:1095674;Name=SCJ9A.29;gbkey=Gene;gene=SCJ9A.29;gene_biotype=protein_coding;gene_synonym=SCJ9A.29;locus_tag=SCO0250
NC_003888.3	RefSeq	CDS	239858	240523	.	+	0	ID=cds225;Parent=gene237;Dbxref=Genbank:NP_624582.1,GeneID:1095674;Name=NP_624582.1;Note=SCJ9A.29%2C possible transcriptional regulator%2C len: 221aa%3B similar to many tetR-family transcriptional regulators eg. SW:TER1_ECOLI TetR from Tn1721 of Escherichia coli (216 aa) fasta scores%3B opt: 429%2C z-score: 484.8%2C E(): 1.2e-19%2C (40.7%25 identity in 209 aa overlap). Contains possible helix-turn-helix motif (+4.13 SD) 37-58aa.;gbkey=CDS;gene=SCJ9A.29;product=transcriptional regulator;protein_id=NP_624582.1;transl_table=11
NC_003888.3	RefSeq	gene	240559	240843	.	-	.	ID=gene238;Dbxref=GeneID:1095675;Name=SCJ9A.30c;gbkey=Gene;gene=SCJ9A.30c;gene_biotype=protein_coding;gene_synonym=SCJ9A.30c;locus_tag=SCO0251
NC_003888.3	RefSeq	CDS	240559	240843	.	-	0	ID=cds226;Parent=gene238;Dbxref=Genbank:NP_624583.1,GeneID:1095675;Name=NP_624583.1;Note=SCJ9A.30c%2C unknown%2C len: 94aa%3B prediction based on Hidden Markov Model.;gbkey=CDS;gene=SCJ9A.30c;product=hypothetical protein;protein_id=NP_624583.1;transl_table=11
NC_003888.3	RefSeq	gene	240876	242123	.	-	.	ID=gene239;Dbxref=GeneID:1095676;Name=SCJ9A.31c;gbkey=Gene;gene=SCJ9A.31c;gene_biotype=protein_coding;gene_synonym=SCJ9A.31c;locus_tag=SCO0252
NC_003888.3	RefSeq	CDS	240876	242123	.	-	0	ID=cds227;Parent=gene239;Dbxref=Genbank:NP_624584.1,GeneID:1095676;Name=NP_624584.1;Note=SCJ9A.31c%2C possible oxidoreductase%2C len: 415 aa%3B similar to many e.g. TR:AAD25066 (EMBL:AF121000) tetracycline resistance associated oxidoreductase homolog from Corynebacterium glutamicum (402 aa) fasta scores%3B opt: 672%2C z-score: 786.6%2C E(): 0%2C (32.8%25 identity in 390 aa overlap) and SW:TETX_BACFR tetracycline resistance oxidoreductase from Bacteroides fragilis transposons (388 aa) fasta scores%3B opt: 275%2C z-score: 324.5%2C E(): 1e-10%2C (24.9%25 identity in 377 aa overlap). Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase.;gbkey=CDS;gene=SCJ9A.31c;product=oxidoreductase;protein_id=NP_624584.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	241050	241655	.	-	.	ID=id230;Dbxref=GeneID:1095676;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 52.70%2C E-value 8.1e-12;gbkey=misc_feature;gene=SCJ9A.31c
NC_003888.3	RefSeq	gene	242194	242766	.	+	.	ID=gene240;Dbxref=GeneID:1095677;Name=SCJ9A.32;gbkey=Gene;gene=SCJ9A.32;gene_biotype=protein_coding;gene_synonym=SCJ9A.32;locus_tag=SCO0253
NC_003888.3	RefSeq	CDS	242194	242766	.	+	0	ID=cds228;Parent=gene240;Dbxref=Genbank:NP_624585.1,GeneID:1095677;Name=NP_624585.1;Note=SCJ9A.32%2C probable tetR-family transcriptional regulator%2C len: 190 aa%3B similar to many e.g. SW:TER1_ECOLI TetR tetracycline resistance repressor from Escherichia coli (216 aa) fasta scores%3B opt: 501%2C z-score: 616.1%2C E(): 5.9e-27%2C (44.5%25 identity in 200 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and Prosite match to PS01081 Bacterial regulatory proteins%2C tetR family signature. Contains possible helix-turn-helix motif (+5.97 SD) 26-47 aa;gbkey=CDS;gene=SCJ9A.32;product=TetR family transcriptional regulator;protein_id=NP_624585.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	242218	242358	.	+	.	ID=id231;Dbxref=GeneID:1095677;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 67.50%2C E-value 5.2e-17;gbkey=misc_feature;gene=SCJ9A.32
NC_003888.3	RefSeq	sequence_feature	242254	242346	.	+	.	ID=id232;Dbxref=GeneID:1095677;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;gene=SCJ9A.32
NC_003888.3	RefSeq	gene	243022	243762	.	-	.	ID=gene241;Dbxref=GeneID:1095678;Name=SCJ9A.33c;gbkey=Gene;gene=SCJ9A.33c;gene_biotype=protein_coding;gene_synonym=SCJ9A.33c;locus_tag=SCO0254
NC_003888.3	RefSeq	CDS	243022	243762	.	-	0	ID=cds229;Parent=gene241;Dbxref=Genbank:NP_624586.1,GeneID:1095678;Name=NP_624586.1;Note=SCJ9A.33c%2C hypothetical protein%2C len: 246 aa%3B weakly similar to TR:Q18926 (EMBL:U23517) hypothetical protein from the eukaryote Caenorhabditis elegans (243 aa) fasta scores%3B opt: 354%2C z-score: 396.7%2C E(): 9.9e-15%2C (28.3%25 identity in 240 aa overlap). Also weakly similar to TR:O87611 (EMBL:AF087482) dienelactone hydrolase from Pseudomonas aeruginosa (236 aa) fasta scores%3B opt: 212%2C z-score: 241.9%2C E(): 4.1e-06%2C (27.4%25 identity in 230 aa overlap). Similar also to TR:Q9I4H1 (EMBL:AE004547) Pseudomonas aeruginosa hypothetical protein PA1166%2C 262 aa%3B fasta scores: opt: 474 Z-score: 515.3 E(): 4.5e-21%3B 35.000%25 identity in 240 aa overlap;gbkey=CDS;gene=SCJ9A.33c;product=hypothetical protein;protein_id=NP_624586.1;transl_table=11
NC_003888.3	RefSeq	gene	243936	245672	.	-	.	ID=gene242;Dbxref=GeneID:1095679;Name=SCF20.01c;gbkey=Gene;gene=SCF20.01c;gene_biotype=protein_coding;gene_synonym=SCF20.01c,SCJ9A.34c;locus_tag=SCO0255
NC_003888.3	RefSeq	CDS	243936	245672	.	-	0	ID=cds230;Parent=gene242;Dbxref=Genbank:NP_733494.1,GeneID:1095679;Name=NP_733494.1;Note=SCF20.01c%2C possible transcriptional regulator%2C len: >476aa%3B weakly similar to the N-terminal region of many transcriptional regulator eg. SW:ACOR_ALCEU acetoin catabolism regulatory protein from Alcaligenes eutrophus (668 aa) fasta scores%3B opt: 288%2C z-score: 292.1%2C E(): 6.6e-09%2C (26.8%25 identity in 496 aa overlap). Contains Pfam match to entry PF00158 sigma54%2C Sigma-54 transcription factors and Prosite match to PS00675 Sigma-54 interaction domain ATP-binding region A signature.~SCJ9A.34c%2C partial CDS%2C possible transcriptional regulator%2C len: >185aa%3B similar to C-terminal region of many eg. SW:HYDG_SALTY hydrogenase regulatory gene from Salmonella typhimurium (441 aa) fasta scores%3B opt: 207%2C z-score: 258.1%2C E(): 5.2e-07%2C (31.3%25 identity in 134 aa overlap). Contains Pfam match to entry PF00158 sigma54%2C Sigma-54 transcription factors. Contains possible helix-turn-helix motif (+4.35 SD) 155-176aa.;gbkey=CDS;gene=SCF20.01c;product=sigma factor;protein_id=NP_733494.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	243954	244073	.	-	.	ID=id233;Dbxref=GeneID:1095679;Note=Pfam match to entry PF00158 sigma54%2C Sigma-54 transcription factors%2C score 36.00%2C E-value 3e-09;gbkey=misc_feature;gene=SCF20.01c
NC_003888.3	RefSeq	sequence_feature	244611	244745	.	-	.	ID=id234;Dbxref=GeneID:1095679;Note=Pfam match to entry PF00158 sigma54%2C Sigma-54 transcription factors%2C score 32.10%2C E-value 3.8e-08;gbkey=misc_feature;gene=SCF20.01c
NC_003888.3	RefSeq	sequence_feature	244632	244673	.	-	.	ID=id235;Dbxref=GeneID:1095679;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;gbkey=misc_feature;gene=SCF20.01c
NC_003888.3	RefSeq	gene	245986	246783	.	+	.	ID=gene243;Dbxref=GeneID:1095680;Name=SCF20.02;gbkey=Gene;gene=SCF20.02;gene_biotype=protein_coding;gene_synonym=SCF20.02;locus_tag=SCO0256
NC_003888.3	RefSeq	CDS	245986	246783	.	+	0	ID=cds231;Parent=gene243;Dbxref=Genbank:NP_624587.1,GeneID:1095680;Name=NP_624587.1;Note=SCF20.02%2C possible short chain oxidoreductase%2C len: 265aa%3B similar to many oxidoreductases e.g. TR:Q9ZNN8 (EMBL:AB009078) L-2%2C3-butanediol dehydrogenase from Corynebacterium glutamicum (258 aa) fasta scores%3B opt: 784%2C z-score: 848.0%2C E(): 0%2C (49.4%25 identity in 255 aa overlap). Contains Pfam matches to entry PF00106 adh_short%2C short chain dehydrogenase and to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCF20.02;product=short chain oxidoreductase;protein_id=NP_624587.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	246013	246576	.	+	.	ID=id236;Dbxref=GeneID:1095680;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 245.80%2C E-value 6e-70;gbkey=misc_feature;gene=SCF20.02
NC_003888.3	RefSeq	sequence_feature	246427	246513	.	+	.	ID=id237;Dbxref=GeneID:1095680;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SCF20.02
NC_003888.3	RefSeq	sequence_feature	246667	246759	.	+	.	ID=id238;Dbxref=GeneID:1095680;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 35.90%2C E-value 8.9e-07;gbkey=misc_feature;gene=SCF20.02
NC_003888.3	RefSeq	gene	246868	247869	.	+	.	ID=gene244;Dbxref=GeneID:1095681;Name=SCF20.03;gbkey=Gene;gene=SCF20.03;gene_biotype=protein_coding;gene_synonym=SCF20.03;locus_tag=SCO0257
NC_003888.3	RefSeq	CDS	246868	247869	.	+	0	ID=cds232;Parent=gene244;Dbxref=Genbank:NP_624588.1,GeneID:1095681;Name=NP_624588.1;Note=SCF20.03%2C hypothetical protein%2C len: 333 aa%3B similar to TR:Q9Y9P8 (EMBL:AP000063) hypothetical protein APE2240 from Aeropyrum pernix (324 aa) fasta scores%3B opt: 728%2C z-score: 908.5%2C E(): 0%2C (51.7%25 identity in 298 aa overlap);gbkey=CDS;gene=SCF20.03;product=hypothetical protein;protein_id=NP_624588.1;transl_table=11
NC_003888.3	RefSeq	gene	247871	248680	.	+	.	ID=gene245;Dbxref=GeneID:1095682;Name=SCF20.04;gbkey=Gene;gene=SCF20.04;gene_biotype=protein_coding;gene_synonym=SCF20.04;locus_tag=SCO0258
NC_003888.3	RefSeq	CDS	247871	248680	.	+	0	ID=cds233;Parent=gene245;Dbxref=Genbank:NP_624589.1,GeneID:1095682;Name=NP_624589.1;Note=SCF20.04%2C hypothetical protein%2C len: 269 aa%3B similar to TR:BAA81254 (EMBL:AP000063) hypothetical protein from Aeropyrum pernix (238 aa) fasta scores%3B opt: 228%2C z-score: 274.4%2C E(): 6.4e-08%2C (29.7%25 identity in 232 aa overlap).;gbkey=CDS;gene=SCF20.04;product=hypothetical protein;protein_id=NP_624589.1;transl_table=11
NC_003888.3	RefSeq	gene	248677	249702	.	+	.	ID=gene246;Dbxref=GeneID:1095683;Name=SCF1.01;gbkey=Gene;gene=SCF1.01;gene_biotype=protein_coding;gene_synonym=SCF1.01,SCF20.05;locus_tag=SCO0259
NC_003888.3	RefSeq	CDS	248677	249702	.	+	0	ID=cds234;Parent=gene246;Dbxref=Genbank:NP_733495.1,GeneID:1095683;Name=NP_733495.1;Note=SCF1.01%2C partial CDS%2C probable alcohol dehydrogenase%2C len: >167aa%3B similar the C-terminal region of many eg. SW:ADH3_SULSO NAD-dependent alcohol dehydrogenase from Sulfolobus solfataricus (347 aa) fasta scores%3B opt: 274%2C z-score: 304.7%2C E(): 1.3e-09%2C (31.8%25 identity in 170 aa overlap). Also similar to C-terminal region of TR:BAA82700 (EMBL:AB017438) from Streptomyces coelicolor (346 aa) fasta scores%3B opt: 372%2C z-score: 409.3%2C E(): 2e-15%2C (40.7%25 identity in 167 aa overlap).~SCF20.05%2C probable alcohol dehydrogenase (zinc-binding)%2C len: >236aa%3B similar to many eg. alcohol dehydrogenases eg. SW:ADH1_SULSO NAD-dependent alcohol dehydrogenase from Sulfolobus solfataricus (347 aa) fasta scores%3B opt: 476%2C z-score: 530.0%2C E(): 3.7e-22%2C (35.4%25 identity in 243 aa overlap). Also similar to TR:BAA82700 (EMBL:AB017438) hypothetical protein from Streptomyces coelicolor (346 aa) fasta scores%3B opt: 591%2C%2C z-score: 655.8%2C E(): 3.7e-29%2C (42.8%25 identity in 243 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and Prosite match to PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=CDS;gene=SCF1.01;product=alcohol dehydrogenase;protein_id=NP_733495.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	248689	249384	.	+	.	ID=id239;Dbxref=GeneID:1095683;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 17.10%2C E-value 1.1e-10;gbkey=misc_feature;gene=SCF1.01
NC_003888.3	RefSeq	sequence_feature	248863	248907	.	+	.	ID=id240;Dbxref=GeneID:1095683;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=misc_feature;gene=SCF1.01
NC_003888.3	RefSeq	gene	249755	250084	.	+	.	ID=gene247;Dbxref=GeneID:1095684;Name=SCF1.02;gbkey=Gene;gene=SCF1.02;gene_biotype=protein_coding;gene_synonym=SCF1.02;locus_tag=SCO0260
NC_003888.3	RefSeq	CDS	249755	250084	.	+	0	ID=cds235;Parent=gene247;Dbxref=Genbank:NP_624590.1,GeneID:1095684;Name=NP_624590.1;Note=SCF1.02%2C unknown%2C len: 109 aa%3B similar to TR:O06569 (EMBL:Z95585) hypothetical protein from Mycobacterium tuberculosis (107 aa) fasta scores%3B opt: 433%2C z-score: 595.2%2C E(): 8.7e-26%2C (56.6%25 identity in 106 aa overlap);gbkey=CDS;gene=SCF1.02;product=hypothetical protein;protein_id=NP_624590.1;transl_table=11
NC_003888.3	RefSeq	gene	250164	250691	.	-	.	ID=gene248;Dbxref=GeneID:1095685;Name=SCF1.03c;gbkey=Gene;gene=SCF1.03c;gene_biotype=protein_coding;gene_synonym=SCF1.03c;locus_tag=SCO0261
NC_003888.3	RefSeq	CDS	250164	250691	.	-	0	ID=cds236;Parent=gene248;Dbxref=Genbank:NP_624591.1,GeneID:1095685;Name=NP_624591.1;Note=SCF1.03c%2C probable acetyltransferase%2C len: 175 aa%3B similar to many e.g. SW:MAA_ECOLI maltose O-acetyltransferase from Escherichia coli (182 aa) fasta scores%3B opt: 365%2C z-score: 432.1%2C E(): 1.1e-16%2C (43.6%25 identity in 140 aa overlap). Contains Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats) and Prosite match to PS00101 Hexapeptide-repeat containing-transferases signature;gbkey=CDS;gene=SCF1.03c;product=acetyltransferase;protein_id=NP_624591.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	250221	250325	.	-	.	ID=id241;Dbxref=GeneID:1095685;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 49.50%2C E-value 3.2e-12;gbkey=misc_feature;gene=SCF1.03c
NC_003888.3	RefSeq	sequence_feature	250221	250307	.	-	.	ID=id242;Dbxref=GeneID:1095685;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=SCF1.03c
NC_003888.3	RefSeq	gene	250805	251740	.	+	.	ID=gene249;Dbxref=GeneID:1095686;Name=SCF1.04;gbkey=Gene;gene=SCF1.04;gene_biotype=protein_coding;gene_synonym=SCF1.04;locus_tag=SCO0262
NC_003888.3	RefSeq	CDS	250805	251740	.	+	0	ID=cds237;Parent=gene249;Dbxref=Genbank:NP_624592.1,GeneID:1095686;Name=NP_624592.1;Note=SCF1.04%2C probable LysR-family transcriptional regulator%2C len: 311 aa%3B similar to many transcriptional regulators especially in the N-terminal region%2C e.g. SW:OXYR_MYCAV regulator of hydrogen peroxide responsive genes from Mycobacterium avium (311 aa) fasta scores%3B opt: 292%2C z-score: 329.4%2C E(): 5.5e-11%2C (36.6%25 identity in 191 aa overlap). Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and Prosite match to PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=CDS;gene=SCF1.04;product=LysR family transcriptional regulator;protein_id=NP_624592.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	250811	251230	.	+	.	ID=id243;Dbxref=GeneID:1095686;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 83.50%2C E-value 4.3e-21;gbkey=misc_feature;gene=SCF1.04
NC_003888.3	RefSeq	sequence_feature	250853	250945	.	+	.	ID=id244;Dbxref=GeneID:1095686;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=SCF1.04
NC_003888.3	RefSeq	gene	251764	252879	.	-	.	ID=gene250;Dbxref=GeneID:1095687;Name=SCF1.05c;gbkey=Gene;gene=SCF1.05c;gene_biotype=protein_coding;gene_synonym=SCF1.05c;locus_tag=SCO0263
NC_003888.3	RefSeq	CDS	251764	252879	.	-	0	ID=cds238;Parent=gene250;Dbxref=Genbank:NP_624593.1,GeneID:1095687;Name=NP_624593.1;Note=SCF1.05c%2C possible oxidoreductase%2C len: 371 aa%3B weakly similar to many e.g. TR:O69945 (EMBL:AL023862) oxidoreductase from Streptomyces coelicolor (430 aa) fasta scores%3B opt: 224%2C z-score: 247.7%2C E(): 2e-06%2C (26.0%25 identity in 392 aa overlap). Contains Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=SCF1.05c;product=oxidoreductase;protein_id=NP_624593.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	252055	252828	.	-	.	ID=id245;Dbxref=GeneID:1095687;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 86.40%2C E-value 5.9e-22;gbkey=misc_feature;gene=SCF1.05c
NC_003888.3	RefSeq	sequence_feature	252401	252403	.	-	.	ID=id246;Dbxref=GeneID:1095687;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCF1.05c
NC_003888.3	RefSeq	gene	252946	253398	.	+	.	ID=gene251;Dbxref=GeneID:1095688;Name=SCF1.06;gbkey=Gene;gene=SCF1.06;gene_biotype=protein_coding;gene_synonym=SCF1.06;locus_tag=SCO0264
NC_003888.3	RefSeq	CDS	252946	253398	.	+	0	ID=cds239;Parent=gene251;Dbxref=Genbank:NP_624594.1,GeneID:1095688;Name=NP_624594.1;Note=SCF1.06%2C possible transcriptional regulator%2C len: 150 aa%3B weakly similar to many e.g. TR:AAD32748 (EMBL:AF127374) transcriptional repressor from Streptomyces lavendulae (163 aa) fasta scores%3B opt: 142%2C z-score: 184.9%2C E(): 0.0062%2C (27.3%25 identity in 128 aa overlap). Contains Pfam match to entry PF01047 MarR%2C MarR family and probable helix-turn-helix motif (+3.47 SD) 68-89aa.;gbkey=CDS;gene=SCF1.06;product=transcriptional regulator;protein_id=NP_624594.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	253090	253395	.	+	.	ID=id247;Dbxref=GeneID:1095688;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 42.90%2C E-value 7.3e-09;gbkey=misc_feature;gene=SCF1.06
NC_003888.3	RefSeq	gene	253499	254290	.	+	.	ID=gene252;Dbxref=GeneID:1095689;Name=SCF1.07;gbkey=Gene;gene=SCF1.07;gene_biotype=protein_coding;gene_synonym=SCF1.07;locus_tag=SCO0265
NC_003888.3	RefSeq	CDS	253499	254290	.	+	0	ID=cds240;Parent=gene252;Dbxref=Genbank:NP_624595.1,GeneID:1095689;Name=NP_624595.1;Note=SCF1.07%2C possible hydroxylase%2C len: 263 aa%3B similar to many from Streptomyces sp. eg. TR:Q55078 (EMBL:U50973) daunomycin C-14 hydroxylase from Streptomyces sp. strain C5 (275 aa) fasta scores%3B opt: 302%2C z-score: 356.8%2C E(): 1.7e-12%2C (39.3%25 identity in 270 aa overlap). Also similar to TR:CAB45588 (EMBL:AL079355) hydroxylase from Streptomyces coelicolor (263 aa) fasta scores%3B opt: 746%2C z-score: 870.2%2C E(): 0%2C (44.3%25 identity in 262 aa overlap).;gbkey=CDS;gene=SCF1.07;product=hydroxylase;protein_id=NP_624595.1;transl_table=11
NC_003888.3	RefSeq	gene	254332	255309	.	-	.	ID=gene253;Dbxref=GeneID:1095690;Name=SCF1.08c;gbkey=Gene;gene=SCF1.08c;gene_biotype=protein_coding;gene_synonym=SCF1.08c;locus_tag=SCO0266
NC_003888.3	RefSeq	CDS	254332	255309	.	-	0	ID=cds241;Parent=gene253;Dbxref=Genbank:NP_624596.1,GeneID:1095690;Name=NP_624596.1;Note=SCF1.08c%2C possible transcriptional regulator%2C len: 325aa%3B similar to many eg. TR:CAB43482 (EMBL:Y18527) PobR regulator from Pseudomonas sp. strain HR199 (293 aa) fasta scores%3B opt: 254%2C z-score: 302.3%2C E(): 1.8e-09%2C (30.3%25 identity in 254 aa overlap). Also similar to TR:O88020 (EMBL:AL031107) transcriptional regulator from Streptomyces coelicolor (301 aa) fasta scores%3B opt: 318%2C z-score: 376.7%2C E(): 1.3e-13%2C (37.2%25 identity in 253 aa overlap). Contains Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family.;gbkey=CDS;gene=SCF1.08c;product=transcriptional regulator;protein_id=NP_624596.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	254383	254622	.	-	.	ID=id248;Dbxref=GeneID:1095690;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 14.90%2C E-value 0.00057;gbkey=misc_feature;gene=SCF1.08c
NC_003888.3	RefSeq	gene	255311	256087	.	+	.	ID=gene254;Dbxref=GeneID:1095691;Name=SCF1.09;gbkey=Gene;gene=SCF1.09;gene_biotype=protein_coding;gene_synonym=SCF1.09;locus_tag=SCO0267
NC_003888.3	RefSeq	CDS	255311	256087	.	+	0	ID=cds242;Parent=gene254;Dbxref=Genbank:NP_624597.1,GeneID:1095691;Name=NP_624597.1;Note=SCF1.09%2C possible hydrolase%2C len: 258 aa%3B similar to many e.g. TR:O67982 (EMBL:AF003947) 3-oxoadipate enol-lactone hydrolase from Rhodococcus opacus (400 aa) fasta scores%3B opt: 259%2C z-score: 300.%2C1 E(): 2.4e-09%2C (31.5%25 identity in 251 aa overlap). Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SCF1.09;product=hydrolase;protein_id=NP_624597.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	255443	256075	.	+	.	ID=id249;Dbxref=GeneID:1095691;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 82.90%2C E-value 6.7e-21;gbkey=misc_feature;gene=SCF1.09
NC_003888.3	RefSeq	gene	256281	256442	.	+	.	ID=gene255;Dbxref=GeneID:1095692;Name=SCF1.10;gbkey=Gene;gene=SCF1.10;gene_biotype=protein_coding;gene_synonym=SCF1.10;locus_tag=SCO0268
NC_003888.3	RefSeq	CDS	256281	256442	.	+	0	ID=cds243;Parent=gene255;Dbxref=Genbank:NP_624598.1,GeneID:1095692;Name=NP_624598.1;Note=SCF1.10%2C unknown%2C len:53 aa;gbkey=CDS;gene=SCF1.10;product=hypothetical protein;protein_id=NP_624598.1;transl_table=11
NC_003888.3	RefSeq	gene	256526	259687	.	+	.	ID=gene256;Dbxref=GeneID:1095693;Name=SCF1.11;gbkey=Gene;gene=SCF1.11;gene_biotype=protein_coding;gene_synonym=SCF1.11;locus_tag=SCO0269
NC_003888.3	RefSeq	CDS	256526	259687	.	+	0	ID=cds244;Parent=gene256;Dbxref=Genbank:NP_624599.1,GeneID:1095693;Name=NP_624599.1;Note=SCF1.11%2C unknown%2C len: 1053aa%3B similar to large proteins thought to be involved in the post-translational modification of lantibiotics eg. SW:SPAB_BACSU subtilin modification protein from Bacillus subtilis (1030 aa) fasta scores%3B opt: 346%2C z-score: 367.5%2C E(): 4.2e-13%2C (22.6%25 identity in 1041 aa overlap).;gbkey=CDS;gene=SCF1.11;product=hypothetical protein;protein_id=NP_624599.1;transl_table=11
NC_003888.3	RefSeq	gene	259684	261084	.	+	.	ID=gene257;Dbxref=GeneID:1095694;Name=SCF1.12;gbkey=Gene;gene=SCF1.12;gene_biotype=protein_coding;gene_synonym=SCF1.12;locus_tag=SCO0270
NC_003888.3	RefSeq	CDS	259684	261084	.	+	0	ID=cds245;Parent=gene257;Dbxref=Genbank:NP_624600.1,GeneID:1095694;Name=NP_624600.1;Note=SCF1.12%2C unknown%2C len: 466 aa%3B similar to proteins predicted to be involved in lantibiotic biosynthesis eg. SW:SPAC_BACSU subtilin biosynthesis protein from Bacillus subtilis (441 aa) fasta scores%3B opt: 502%2C z-score: 549.2%2C E(): 3.2e-23%2C (28.9%25 identity in 405 aa overlap);gbkey=CDS;gene=SCF1.12;product=hypothetical protein;protein_id=NP_624600.1;transl_table=11
NC_003888.3	RefSeq	gene	261366	262319	.	+	.	ID=gene258;Dbxref=GeneID:1095695;Name=SCF1.13;gbkey=Gene;gene=SCF1.13;gene_biotype=protein_coding;gene_synonym=SCF1.13;locus_tag=SCO0271
NC_003888.3	RefSeq	CDS	261366	262319	.	+	0	ID=cds246;Parent=gene258;Dbxref=Genbank:NP_624601.1,GeneID:1095695;Name=NP_624601.1;Note=SCF1.13%2C possible binding-protein-dependent transport protein%2C len: 317aa%3B similar to many predicted membrane transporters eg. TR:CAB41203 (EMBL:AL049661) binding-protein-dependent transport protein from Streptomyces coelicolor (327 aa) fasta scores%3B opt: 624%2C z-score: 720.7%2C E(): 8.8e-33%2C (35.9%25 identity in 320 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCF1.13;product=binding-protein-dependent transport protein;protein_id=NP_624601.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	261969	262190	.	+	.	ID=id250;Dbxref=GeneID:1095695;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.30%2C E-value 1.7e-13;gbkey=misc_feature;gene=SCF1.13
NC_003888.3	RefSeq	sequence_feature	261972	262058	.	+	.	ID=id251;Dbxref=GeneID:1095695;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF1.13
NC_003888.3	RefSeq	gene	262330	263220	.	+	.	ID=gene259;Dbxref=GeneID:1095696;Name=SCF1.14;gbkey=Gene;gene=SCF1.14;gene_biotype=protein_coding;gene_synonym=SCF1.14;locus_tag=SCO0272
NC_003888.3	RefSeq	CDS	262330	263220	.	+	0	ID=cds247;Parent=gene259;Dbxref=Genbank:NP_624602.1,GeneID:1095696;Name=NP_624602.1;Note=SCF1.14%2C possible binding-protein-dependent transport protein%2C len: 296aa%3B similar to many predicted membrane transporters eg. TR:O53483 (EMBL:AL021899) sugar transport protein from Mycobacterium tuberculosis (280 aa) fasta scores%3B opt: 594%2C z-score: 708.0%2C E(): 4.5e-32%2C (34.6%25 identity in 283 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCF1.14;product=binding-protein-dependent transport protein;protein_id=NP_624602.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	262861	263091	.	+	.	ID=id252;Dbxref=GeneID:1095696;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 64.10%2C E-value 3.1e-15;gbkey=misc_feature;gene=SCF1.14
NC_003888.3	RefSeq	sequence_feature	262864	262950	.	+	.	ID=id253;Dbxref=GeneID:1095696;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF1.14
NC_003888.3	RefSeq	gene	263285	264634	.	+	.	ID=gene260;Dbxref=GeneID:1095697;Name=SCF1.15;gbkey=Gene;gene=SCF1.15;gene_biotype=protein_coding;gene_synonym=SCF1.15,SCF85.01;locus_tag=SCO0273
NC_003888.3	RefSeq	CDS	263285	264634	.	+	0	ID=cds248;Parent=gene260;Dbxref=Genbank:NP_733496.1,GeneID:1095697;Name=NP_733496.1;Note=SCF85.01%2C unknown%2C partial CDS%2C len: >264 aa. Weakly similar to several hypotheticals e.g. Mycobacterium tuberculosis TR:O53485 (EMBL%3B AL021899) lipoprotein component of sugar transport system (439 aa)%2C fasta scores opt: 258 z-score: 307.2 E(): 9.3e-10 27.9%25 identity in 222 aa overlap and Thermotoga maritima TR:AAD35892 (EMBL%3B AE001748) sugar ABC transporter%2C periplasmic sugar-binding protein TM0810 (420 aa)%2C fasta scores opt: 169 z-score: 203.2 E(): 0.00058 25.1%25 identity in 263 aa overlap.~SCF1.15%2C partial CDS%2C possible substrate binding protein (extracellular) (binding-protein-dependent transport)%2C len: >221aa%3B similar to many the N-terminal region of undefined function eg. SW:YURO_BACSU hypothetical ABC transporter extracellular binding protein from Bacillus subtilis (422 aa) fasta scores%3B opt: 224%2C z-score: 276.0%2C E(): 5.2e-08%2C (26.1%25 identity in 161 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCF1.15;product=substrate binding protein;protein_id=NP_733496.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	264754	264759	.	+	.	ID=id254;gbkey=RBS
NC_003888.3	RefSeq	gene	264764	266263	.	+	.	ID=gene261;Dbxref=GeneID:1095698;Name=SCF85.02;gbkey=Gene;gene=SCF85.02;gene_biotype=protein_coding;gene_synonym=SCF85.02;locus_tag=SCO0274
NC_003888.3	RefSeq	CDS	264764	266263	.	+	0	ID=cds249;Parent=gene261;Dbxref=Genbank:NP_624603.1,GeneID:1095698;Name=NP_624603.1;Note=SCF85.02%2C possible alpha-galactosidase%2C len: 499 aa. Similar to many alpha galactosidases e.g. Thermus aquaticus TR:AAD32628(EMBL%3B AF135399) alpha-galactosidase (476 aa)%2C fasta scores opt: 1329 z-score: 1530.0 E(): 0 45.8%25 identity in 487 aa overlap;gbkey=CDS;gene=SCF85.02;product=alpha-galactosidase;protein_id=NP_624603.1;transl_table=11
NC_003888.3	RefSeq	gene	266356	267513	.	+	.	ID=gene262;Dbxref=GeneID:1095699;Name=SCF85.03;gbkey=Gene;gene=SCF85.03;gene_biotype=protein_coding;gene_synonym=SCF85.03;locus_tag=SCO0275
NC_003888.3	RefSeq	CDS	266356	267513	.	+	0	ID=cds250;Parent=gene262;Dbxref=Genbank:NP_624604.1,GeneID:1095699;Name=NP_624604.1;Note=SCF85.03%2C possible transcriptional repressor protein%2C len: 385 aa. Low similarity to many repressor proteins e.g. Anaerocellum thermophilum SW:XYLR_ANATH (EMBL%3B Z69782)xylose repressor (399 aa)%2C fasta scores opt: 325 z-score: 375.7 E(): 1.4e-13 23.3%25 identity in 395 aa overlap and Streptomyces coelicolor TR:O50502 (EMBL%3B AL009199) probable transcriptional repressor protein SC7B7.05 (403 aa)%2C fasta scores opt: 402 z-score: 463.7 E(): 1.8e-18 29.7%25 identity in 404 aa overlap. Contains a Pfam match to entry PF00480 ROK%2C ROK family and has a possible helix turn helix motif between aa 30..51.;gbkey=CDS;gene=SCF85.03;product=transcriptional repressor protein;protein_id=NP_624604.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	266614	267087	.	+	.	ID=id255;Dbxref=GeneID:1095699;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 95.10%2C E-value 3.4e-27;gbkey=misc_feature;gene=SCF85.03
NC_003888.3	RefSeq	gene	267585	268838	.	+	.	ID=gene263;Dbxref=GeneID:1095700;Name=SCF85.04;gbkey=Gene;gene=SCF85.04;gene_biotype=protein_coding;gene_synonym=SCF85.04;locus_tag=SCO0276
NC_003888.3	RefSeq	CDS	267585	268838	.	+	0	ID=cds251;Parent=gene263;Dbxref=Genbank:NP_624605.1,GeneID:1095700;Name=NP_624605.1;Note=SCF85.04%2C possible oxidoreductase%2C len: 417 aa. Weakly similar to many including: Bacillus subtilis TR:O34371 (EMBL:AF008220) YteT (428 aa)%2C fasta scores opt: 296 z-score: 340.2 E(): 1.3e-11 25.3%25 identity in 379 aa overlap and Alcaligenes sp. (strain BR60) SW:CBAC_ALCSB (EMBL%3B U18133) 1-carboxy-3-chloro-3%2C4-dihydroxycyclo hexa-1%2C5-diene dehydrogenase (497 aa)%2C fasta scores opt: 300 z-score: 345.3 E(): 7e-12 32.4%25 identity in 216 aa overlap. Contains a Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family;gbkey=CDS;gene=SCF85.04;product=oxidoreductase;protein_id=NP_624605.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	267618	268460	.	+	.	ID=id256;Dbxref=GeneID:1095700;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 148.90%2C E-value 8.6e-41;gbkey=misc_feature;gene=SCF85.04
NC_003888.3	RefSeq	gene	269020	269688	.	-	.	ID=gene264;Dbxref=GeneID:1095701;Name=SCF85.05c;gbkey=Gene;gene=SCF85.05c;gene_biotype=protein_coding;gene_synonym=SCF85.05c;locus_tag=SCO0277
NC_003888.3	RefSeq	CDS	269020	269688	.	-	0	ID=cds252;Parent=gene264;Dbxref=Genbank:NP_624606.1,GeneID:1095701;Name=NP_624606.1;Note=SCF85.05c%2C unknown%2C len:222 aa. Low similarity to Haemophilus influenzae SW:PEPE_HAEIN (EMBL%3B U32740) peptidase E (EC 3.4.-.-) (alpha-aspartyl dipeptidase) (226 aa)%2C fasta scores opt: 134 z-score: 169.6 E(): 0.043 24.4%25 identity in 209 aa overlap.;gbkey=CDS;gene=SCF85.05c;product=hypothetical protein;protein_id=NP_624606.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	269772	269777	.	+	.	ID=id257;gbkey=RBS
NC_003888.3	RefSeq	gene	269783	270397	.	+	.	ID=gene265;Dbxref=GeneID:1095702;Name=SCF85.06;gbkey=Gene;gene=SCF85.06;gene_biotype=protein_coding;gene_synonym=SCF85.06;locus_tag=SCO0278
NC_003888.3	RefSeq	CDS	269783	270397	.	+	0	ID=cds253;Parent=gene265;Dbxref=Genbank:NP_624607.1,GeneID:1095702;Name=NP_624607.1;Note=SCF85.06%2C MutT domain containing protein%2C len: 204. Similar to the MutT domains of other proteins e.g. Bacillus subtilis SW:YZGD_BACSU (EMBL:U17168) hypothetical 45.4 KD protein in thiaminase (413 aa)%2C fasta scores opt: 138 z-score: 176.6 E(): 0.017 36.1%25 identity in 97 aa overlap. Contains a Pfam match to entry PF00293 mutT%2C Bacterial MutT protein.;gbkey=CDS;gene=SCF85.06;product=MutT domain-containing protein;protein_id=NP_624607.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	270014	270127	.	+	.	ID=id258;Dbxref=GeneID:1095702;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 22.80%2C E-value 5.1e-05;gbkey=misc_feature;gene=SCF85.06
NC_003888.3	RefSeq	ribosome_entry_site	270464	270467	.	+	.	ID=id259;gbkey=RBS
NC_003888.3	RefSeq	gene	270477	271748	.	+	.	ID=gene266;Dbxref=GeneID:1095703;Name=SCF85.07;gbkey=Gene;gene=SCF85.07;gene_biotype=protein_coding;gene_synonym=SCF85.07;locus_tag=SCO0279
NC_003888.3	RefSeq	CDS	270477	271748	.	+	0	ID=cds254;Parent=gene266;Dbxref=Genbank:NP_624608.1,GeneID:1095703;Name=NP_624608.1;Note=SCF85.07%2C possible glycosyl hydrolase%2C len%3B 423 aa. Shares a low level of similarity with many alpha-l-fucosidases e.g. Thermotoga maritima TR:AAD35394 (EMBL:AE001712) alpha-l-fucosidase%2C  (449 aa)%2C fasta scores opt: 332 z-score: 363.4 E(): 6.9e-13 35.8%25 identity in 358 aa overlap.;gbkey=CDS;gene=SCF85.07;product=glycosyl hydrolase;protein_id=NP_624608.1;transl_table=11
NC_003888.3	RefSeq	gene	271768	272469	.	-	.	ID=gene267;Dbxref=GeneID:1095704;Name=SCF85.08c;gbkey=Gene;gene=SCF85.08c;gene_biotype=protein_coding;gene_synonym=SCF85.08c;locus_tag=SCO0280
NC_003888.3	RefSeq	CDS	271768	272469	.	-	0	ID=cds255;Parent=gene267;Dbxref=Genbank:NP_624609.1,GeneID:1095704;Name=NP_624609.1;Note=SCF85.08c%2C unknown%2C len: 233 aa. Weakly similar to many hypotheticals e.g. Haemophilus influenzae SW:YQIE_HAEIN (EMBL%3B U32723) hypothetical protein HI0398 (217 aa)%2C fasta scores opt: 291 z-score: 349.5 E(): 4.1e-12 31.8%25 identity in 179 aa overlap. Contains a PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCF85.08c;product=hypothetical protein;protein_id=NP_624609.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	271855	271878	.	-	.	ID=id260;Dbxref=GeneID:1095704;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF85.08c
NC_003888.3	RefSeq	gene	272466	272834	.	-	.	ID=gene268;Dbxref=GeneID:1095705;Name=SCF85.09c;gbkey=Gene;gene=SCF85.09c;gene_biotype=protein_coding;gene_synonym=SCF85.09c;locus_tag=SCO0281
NC_003888.3	RefSeq	CDS	272466	272834	.	-	0	ID=cds256;Parent=gene268;Dbxref=Genbank:NP_624610.1,GeneID:1095705;Name=NP_624610.1;Note=SCF85.09c%2C unknown%2C len: 122 aa.;gbkey=CDS;gene=SCF85.09c;product=hypothetical protein;protein_id=NP_624610.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	272474	272479	.	-	.	ID=id261;Dbxref=GeneID:1095705;gbkey=RBS;gene=SCF85.09c
NC_003888.3	RefSeq	ribosome_entry_site	272884	272888	.	+	.	ID=id262;gbkey=RBS
NC_003888.3	RefSeq	gene	272892	273656	.	+	.	ID=gene269;Dbxref=GeneID:1095706;Name=SCF85.10;gbkey=Gene;gene=SCF85.10;gene_biotype=protein_coding;gene_synonym=SCF85.10;locus_tag=SCO0282
NC_003888.3	RefSeq	CDS	272892	273656	.	+	0	ID=cds257;Parent=gene269;Dbxref=Genbank:NP_624611.1,GeneID:1095706;Name=NP_624611.1;Note=SCF85.10%2C probable deoR family transcriptional regulator%2C len: 254 aa%3B similar to many transcriptional regulators of the deoR family e.g. Bacillus subtilis TR:P94591 (EMBL:Z83337) similar to phosphotransferase system regulator (258 aa)%2C fasta scores opt: 433 z-score: 500.9 E(): 1.5e-20 33.5%25 identity in 254 aa overlap. Contains a PS00894 Bacterial regulatory proteins%2C deoR family signature and a Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family. Has a possible helix turn helix motif between aa 23..44.;gbkey=CDS;gene=SCF85.10;product=deoR family transcriptional regulator;protein_id=NP_624611.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	272913	273587	.	+	.	ID=id263;Dbxref=GeneID:1095706;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 149.10%2C E-value 2.8e-41;gbkey=misc_feature;gene=SCF85.10
NC_003888.3	RefSeq	sequence_feature	272913	273017	.	+	.	ID=id264;Dbxref=GeneID:1095706;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature;gbkey=misc_feature;gene=SCF85.10
NC_003888.3	RefSeq	ribosome_entry_site	272934	272938	.	-	.	ID=id265;gbkey=RBS
NC_003888.3	RefSeq	gene	274101	274595	.	-	.	ID=gene270;Dbxref=GeneID:1095707;Name=SCF85.11c;gbkey=Gene;gene=SCF85.11c;gene_biotype=protein_coding;gene_synonym=SCF85.11c;locus_tag=SCO0283
NC_003888.3	RefSeq	CDS	274101	274595	.	-	0	ID=cds258;Parent=gene270;Dbxref=Genbank:NP_624612.1,GeneID:1095707;Name=NP_624612.1;Note=SCF85.11c%2C unknown%2C len: 164 aa.;gbkey=CDS;gene=SCF85.11c;product=hypothetical protein;protein_id=NP_624612.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	274749	274753	.	+	.	ID=id266;gbkey=RBS
NC_003888.3	RefSeq	gene	274763	276805	.	+	.	ID=gene271;Dbxref=GeneID:1095708;Name=SCF85.12;gbkey=Gene;gene=SCF85.12;gene_biotype=protein_coding;gene_synonym=SCF85.12;locus_tag=SCO0284
NC_003888.3	RefSeq	CDS	274763	276805	.	+	0	ID=cds259;Parent=gene271;Dbxref=Genbank:NP_624613.1,GeneID:1095708;Name=NP_624613.1;Note=SCF85.12%2C possible  alpha-galactosidase%2C len: 680 aa. Highly similar to many Eukaryotic alpha-galactosidases over the first 415 aa%2C e.g. Coffea arabica (Coffee) alpha-galactosidase precursor (EC 3.2.1.22) (melibiase) (378 aa)%2Copt: 1323 z-score: 1416.9 E(): 0%3B 54.5%25 identity in 354 aa overlap%2C in addition to Saccharopolyspora erythraea (Streptomyces erythraeus)alpha galactosidase precursor MelA (428 aa)%2Cfasta scores opt: 623 z-score: 668.6 E(): 6.9e-30 50.6%25 identity in 427 aa overlap. Contains a PS00512 Alpha-galactosidase signature%2C a PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site and a possible N-terminal signal sequence;gbkey=CDS;gene=SCF85.12;product=alpha-galactosidase;protein_id=NP_624613.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	275045	275095	.	+	.	ID=id267;Dbxref=GeneID:1095708;Note=PS00512 Alpha-galactosidase signature;gbkey=misc_feature;gene=SCF85.12
NC_003888.3	RefSeq	sequence_feature	276494	276523	.	+	.	ID=id268;Dbxref=GeneID:1095708;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SCF85.12
NC_003888.3	RefSeq	gene	276938	278827	.	+	.	ID=gene272;Dbxref=GeneID:1095709;Name=SCF85.13;gbkey=Gene;gene=SCF85.13;gene_biotype=protein_coding;gene_synonym=SCF85.13;locus_tag=SCO0285
NC_003888.3	RefSeq	CDS	276938	278827	.	+	0	ID=cds260;Parent=gene272;Dbxref=Genbank:NP_624614.1,GeneID:1095709;Name=NP_624614.1;Note=SCF85.13%2C possible sodium/proton antiporter%2C len: 629 aa. Similar to many including Streptomyces coelicolor TR:CAB38501 (EMBL%3B AL035636) sodium/proton antiporter SCH5.27 (474 aa)%2C fasta scores opt: 603 z-score: 691.3 E(): 3.7e-31 37.7%25 identity in 454 aa overlap. This protein is longer than most of the similar antiporter proteins. The additional C-terminal sequence has similarity to many outer membrane proteins e.g. Coxiella burnetii TR:O07645 (EMBL%3B AB004699) 27KDA outer membrane protein (252 aa)%2C fasta scores opt: 250 z-score: 291.5 E():c7e-09 28.6%25 identity in 140 aa overlap. Contains membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF85.13;product=sodium/proton antiporter;protein_id=NP_624614.1;transl_table=11
NC_003888.3	RefSeq	gene	278910	279416	.	-	.	ID=gene273;Dbxref=GeneID:1095710;Name=SCF85.14c;gbkey=Gene;gene=SCF85.14c;gene_biotype=protein_coding;gene_synonym=SCF85.14c;locus_tag=SCO0286
NC_003888.3	RefSeq	CDS	278910	279416	.	-	0	ID=cds261;Parent=gene273;Dbxref=Genbank:NP_624615.1,GeneID:1095710;Name=NP_624615.1;Note=SCF85.14c%2C possible  peptidoglycan binding protein%2C len: 168 aa. Some similarity to N-acetylmuramoyl-L-alanine amidases over the peptidoglycan binding domains e.g. Bacillus subtilis SW:CWLA_BACSU (EMBL%3B X51424) (272 aa)%2C fasta scores opt: 127 z-score: 157.1 E():0.21 34.9%25 identity in 63 aa overlap. Contains a Pfam match to entry PF01471 PG_binding_1%2C  peptidoglycan binding domain. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SCF85.14c;product=peptidoglycan binding protein;protein_id=NP_624615.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	278958	279170	.	-	.	ID=id269;Dbxref=GeneID:1095710;Note=Pfam match to entry PF01471 PG_binding_1%2C  peptidoglycan binding domain%2C score 30.00%2C E-value 5.7e-05;gbkey=misc_feature;gene=SCF85.14c
NC_003888.3	RefSeq	ribosome_entry_site	279425	279429	.	-	.	ID=id270;gbkey=RBS
NC_003888.3	RefSeq	gene	279691	280695	.	+	.	ID=gene274;Dbxref=GeneID:1095711;Name=SCF85.15;gbkey=Gene;gene=SCF85.15;gene_biotype=protein_coding;gene_synonym=SCF85.15;locus_tag=SCO0287
NC_003888.3	RefSeq	CDS	279691	280695	.	+	0	ID=cds262;Parent=gene274;Dbxref=Genbank:NP_624616.1,GeneID:1095711;Name=NP_624616.1;Note=SCF85.15%2C possible regulatory protein%2C len: 334 aa. similar to many e.g. Rhodococcus rhodochrous TR:P72312 (EMBL%3B D67026) nitrilase regulator NitR (319 aa)%2C fasta scores opt: 538 z-score: 658.4 E(): 2.5e-29 30.6%25 identity in 307 aa overlap and tp SW:FEAR_ECOLI (EMBL:D67041) Escherichia coli transcriptional activator FeaR%2C 301 aa%3B fasta scores: opt: 290 Z-score: 343.6 E(): 1.7e-11%3B 23.970%25 identity in 267 aa overlap. Contains a Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family;gbkey=CDS;gene=SCF85.15;product=regulatory protein;protein_id=NP_624616.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	280372	280638	.	+	.	ID=id271;Dbxref=GeneID:1095711;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 53.90%2C E-value 3.6e-12;gbkey=misc_feature;gene=SCF85.15
NC_003888.3	RefSeq	gene	280692	281132	.	-	.	ID=gene275;Dbxref=GeneID:1095712;Name=SCF85.16;gbkey=Gene;gene=SCF85.16;gene_biotype=protein_coding;gene_synonym=SCF85.16;locus_tag=SCO0288
NC_003888.3	RefSeq	CDS	280692	281132	.	-	0	ID=cds263;Parent=gene275;Dbxref=Genbank:NP_624617.1,GeneID:1095712;Name=NP_624617.1;Note=SCF85.16%2C unknown%2C len: 146 aa.;gbkey=CDS;gene=SCF85.16;product=hypothetical protein;protein_id=NP_624617.1;transl_table=11
NC_003888.3	RefSeq	gene	281129	282157	.	-	.	ID=gene276;Dbxref=GeneID:1095713;Name=SCF85.17c;gbkey=Gene;gene=SCF85.17c;gene_biotype=protein_coding;gene_synonym=SCF85.17c;locus_tag=SCO0289
NC_003888.3	RefSeq	CDS	281129	282157	.	-	0	ID=cds264;Parent=gene276;Dbxref=Genbank:NP_624618.1,GeneID:1095713;Name=NP_624618.1;Note=SCF85.17c%2C probable transcriptional regulator%2C len: 342 aa. Similar to many e.g. Streptomyces lividans TR:Q9ZI18 (EMBL%3B AF043654) BxlR (338 aa)%2C fasta scores opt: 753 z-score: 849.8 E(): 0 42.9%25 identity in 333 aa overlap and Streptomyces coelicolor TR:O86795 (EMBL%3B AL031317) transcriptional regulator SC6G4.32 (355 aa)%2C fasta scores opt: 880 z-score: 991.6 E(): 0 47.5%25 identity in 339 aa overlap. Contains Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family%2C Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and a PS00356 Bacterial regulatory proteins%2C lacI family signature. Has a helix turn helix motif between aa 9..30;gbkey=CDS;gene=SCF85.17c;product=transcriptional regulator;protein_id=NP_624618.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	281255	281971	.	-	.	ID=id272;Dbxref=GeneID:1095713;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 92.80%2C E-value 6.8e-24;gbkey=misc_feature;gene=SCF85.17c
NC_003888.3	RefSeq	sequence_feature	282059	282142	.	-	.	ID=id273;Dbxref=GeneID:1095713;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 41.10%2C E-value 3.7e-10;gbkey=misc_feature;gene=SCF85.17c
NC_003888.3	RefSeq	sequence_feature	282074	282130	.	-	.	ID=id274;Dbxref=GeneID:1095713;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCF85.17c
NC_003888.3	RefSeq	ribosome_entry_site	282164	282168	.	-	.	ID=id275;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	282323	282337	.	+	.	ID=id276;Note=similar to that found in the intergenic region between bxlE and bxlR of S. lividans%2C also found at the 5' end of xylanase genes (xln) in various Streptomycetes%3B possibly involved in regulation;gbkey=stem_loop
NC_003888.3	RefSeq	gene	282491	283801	.	+	.	ID=gene277;Dbxref=GeneID:1095714;Name=SCF85.18;gbkey=Gene;gene=SCF85.18;gene_biotype=protein_coding;gene_synonym=SCF85.18;locus_tag=SCO0290
NC_003888.3	RefSeq	CDS	282491	283801	.	+	0	ID=cds265;Parent=gene277;Dbxref=Genbank:NP_624619.1,GeneID:1095714;Name=NP_624619.1;Note=SCF85.18%2C probable solute-binding protein%2C len: 436 aa. Similar to many including: Streptomyces lividans TR:Q9Z492 (EMBL%3B AF043654) BxlE precursor (434 aa)%2C fasta scores opt: 946 z-score: 1058.6 E(): 0 33.7%25 identity in 427 aa overlap and Streptococcus mutans SW:MSME_STRMU (EMBL%3B M77351) multiple sugar-binding protein precursor MsmE (420 aa)%2C fasta scores opt: 258 z-score: 291.6 E(): 6.9e-09 24.2%25 identity in 351 aa overlap. Contains a Pfam match to entry PF01547 SBP_bacterial_1%2C PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF85.18;product=solute-binding protein;protein_id=NP_624619.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	282530	282562	.	+	.	ID=id277;Dbxref=GeneID:1095714;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF85.18
NC_003888.3	RefSeq	sequence_feature	282563	282586	.	+	.	ID=id278;Dbxref=GeneID:1095714;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF85.18
NC_003888.3	RefSeq	sequence_feature	282902	283786	.	+	.	ID=id279;Dbxref=GeneID:1095714;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C %2C score 52.40%2C E-value 9.8e-12;gbkey=misc_feature;gene=SCF85.18
NC_003888.3	RefSeq	gene	283798	284700	.	+	.	ID=gene278;Dbxref=GeneID:1095715;Name=SCF85.19;gbkey=Gene;gene=SCF85.19;gene_biotype=protein_coding;gene_synonym=SCF85.19;locus_tag=SCO0291
NC_003888.3	RefSeq	CDS	283798	284700	.	+	0	ID=cds266;Parent=gene278;Dbxref=Genbank:NP_624620.1,GeneID:1095715;Name=NP_624620.1;Note=SCF85.19%2C possible binding protein dependent transport protein%2C len: 300 aa. Similar to many including: Streptomyces lividans TR:Q9ZI17 (EMBL%3B AF043654) BxlF (317 aa)%2C fasta scores opt: 873 z-score: 1049.2 E(): 0 44.0%25 identity in 298 aa overlap and Streptomyces coelicolor TR:CAB41203 (EMBL%3B AL049661)binding protein dependent transport protein SCE134.05C (327 aa)%2C fasta scores opt: 551 z-score: 664.3 E(): 1.2e-29 32.7%25 identity in 294 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and a PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains multiple membrane-spanning hydrophobic domains.;gbkey=CDS;gene=SCF85.19;product=binding protein dependent transport protein;protein_id=NP_624620.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	284338	284562	.	+	.	ID=id280;Dbxref=GeneID:1095715;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.30%2C E-value 1.7e-13;gbkey=misc_feature;gene=SCF85.19
NC_003888.3	RefSeq	sequence_feature	284341	284427	.	+	.	ID=id281;Dbxref=GeneID:1095715;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF85.19
NC_003888.3	RefSeq	gene	284702	285598	.	+	.	ID=gene279;Dbxref=GeneID:1095716;Name=SC5G9.01;gbkey=Gene;gene=SC5G9.01;gene_biotype=protein_coding;gene_synonym=SC5G9.01,SCF85.20;locus_tag=SCO0292
NC_003888.3	RefSeq	CDS	284702	285598	.	+	0	ID=cds267;Parent=gene279;Dbxref=Genbank:NP_733497.1,GeneID:1095716;Name=NP_733497.1;Note=SC5G9.01%2C probable sugar ABC-transporter integral membrane protein%2C partial CDS%2C len: >148 aa%3B similar to e.g. TR:O51925 (EMBL:AF012836)%2C malG%2C Thermococcus litoralis inner membrane protein from trehalose/maltose ABC-transporter system (278 aa)%2C fasta scores%3B opt: 296 z-score: 384.7 E(): 4.6e-14%2C 32.2%25 identity in 146 aa overlap. Also similar to many ABC-transporter components e.g. SW:YOR2_CALSR (EMBL:L18965) Caldicellulosiruptor sp. (strain Rt8B.4) membrane bound sugar transport protein ORF2 (275 aa) (43.0%25 identity in 142 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component~SCF85.20%2C possible transmembrane transport protein%2C partial CDS%2C len: >185 aa. Similar to Streptomyces lividans TR:Q9ZI16 (EMBL%3B AF043654) BxlG (272 aa)%2C fasta scores opt: 377 z-score: 450.9 E(): 9.2e-18 39.9%25 identity in 158 aa overlap and Streptomyces coelicolor TR:O50501 (EMBL%3B AL009199) probable transmembrane transport protein SCSt7b7.04 (302 aa)%2C fasta scores opt: 288 z-score: 346.2 E(): 6.2e-12 29.3%25 identity in 181 aa overlap. Contains multiple potential membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC5G9.01;product=sugar ABC-transporter integral membrane protein;protein_id=NP_733497.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	285248	285472	.	+	.	ID=id282;Dbxref=GeneID:1095716;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 53.80%2C E-value 3.8e-12;gbkey=misc_feature;gene=SC5G9.01
NC_003888.3	RefSeq	ribosome_entry_site	285705	285709	.	+	.	ID=id283;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	285714	288104	.	+	.	ID=gene280;Dbxref=GeneID:1095717;Name=SC5G9.02;gbkey=Gene;gene=SC5G9.02;gene_biotype=protein_coding;gene_synonym=SC5G9.02;locus_tag=SCO0293
NC_003888.3	RefSeq	CDS	285714	288104	.	+	0	ID=cds268;Parent=gene280;Dbxref=Genbank:NP_624621.1,GeneID:1095717;Name=NP_624621.1;Note=SC5G9.02%2C probable beta-xylosidase%2C len: 796 aa%3B similar to many xylosidases and glucosidases e.g. TR:Q9ZI15 (EMBL:AF043654)%2C blxA%2C Streptomyces lividans beta-D-xylosidase (861 aa)%2C fasta scores%3B opt: 3669 z-score: 3880.7 E(): 0%2C 71.3%25 identity in 791 aa overlap. Similar to others from S.coelicolor e.g. TR:O87852 (EMBL:AL031013) S.coelicolor probable beta-glucosidase (859 aa) (29.7%25 identity in 811 aa overlap). Contains 2 Pfam matches to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3;gbkey=CDS;gene=SC5G9.02;product=beta-xylosidase;protein_id=NP_624621.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	286035	287042	.	+	.	ID=id284;Dbxref=GeneID:1095717;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3%2C score 295.00%2C E-value 3.2e-89;gbkey=misc_feature;gene=SC5G9.02
NC_003888.3	RefSeq	sequence_feature	287145	287990	.	+	.	ID=id285;Dbxref=GeneID:1095717;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3%2C score 230.20%2C E-value 1.6e-69;gbkey=misc_feature;gene=SC5G9.02
NC_003888.3	RefSeq	gene	288187	288840	.	-	.	ID=gene281;Dbxref=GeneID:1095718;Name=SC5G9.03c;gbkey=Gene;gene=SC5G9.03c;gene_biotype=protein_coding;gene_synonym=SC5G9.03c;locus_tag=SCO0294
NC_003888.3	RefSeq	CDS	288187	288840	.	-	0	ID=cds269;Parent=gene281;Dbxref=Genbank:NP_624622.1,GeneID:1095718;Name=NP_624622.1;Note=SC5G9.03c%2C probable acetyltransferase%2C len: 217 aa%3B similar to many acetyltransferases which inactivate virginiamycin A-like antibiotics by acetylation e.g. SW:SATA_ENTFC (EMBL:L12033)%2C satA%2C Enterococcus faecium streptogramin A acetyltransferase (209 aa)%2C fasta scores%3B opt: 632 z-score: 743.9 E(): 0%2C 43.6%25 identity in 202 aa overlap. Contains Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats);gbkey=CDS;gene=SC5G9.03c;product=acetyltransferase;protein_id=NP_624622.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	288388	288492	.	-	.	ID=id286;Dbxref=GeneID:1095718;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 46.90%2C E-value 1.8e-11;gbkey=misc_feature;gene=SC5G9.03c
NC_003888.3	RefSeq	gene	288987	290456	.	-	.	ID=gene282;Dbxref=GeneID:1095719;Name=SC5G9.04c;gbkey=Gene;gene=SC5G9.04c;gene_biotype=protein_coding;gene_synonym=SC5G9.04c;locus_tag=SCO0295
NC_003888.3	RefSeq	CDS	288987	290456	.	-	0	ID=cds270;Parent=gene282;Dbxref=Genbank:NP_624623.1,GeneID:1095719;Name=NP_624623.1;Note=SC5G9.04c%2C probable transmembrane efflux protein%2C len: 489 aa%3B similar to many e.g. TR:Q54806 (EMBL:X84072)%2C ptr%2C Streptomyces pristinaespiralis multidrug resistance integral membrane protein (501 aa)%2C fasta scores%3B opt: 975 z-score: 1038.5 E(): 0%2C 37.1%25 identity in 421 aa overlap. Similar to others from S.coelicolor e.g. TR:Q9ZBW5 (EMBL:AL034443) S.coelicolor probable integral membrane efflux protein (504 aa) (38.8%25 identity in 484 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions and PS00216 Sugar transport proteins signature 1;gbkey=CDS;gene=SC5G9.04c;product=transmembrane efflux protein;protein_id=NP_624623.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	290196	290246	.	-	.	ID=id287;Dbxref=GeneID:1095719;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC5G9.04c
NC_003888.3	RefSeq	gene	290584	291165	.	+	.	ID=gene283;Dbxref=GeneID:1095720;Name=SC5G9.05;gbkey=Gene;gene=SC5G9.05;gene_biotype=protein_coding;gene_synonym=SC5G9.05;locus_tag=SCO0296
NC_003888.3	RefSeq	CDS	290584	291165	.	+	0	ID=cds271;Parent=gene283;Dbxref=Genbank:NP_624624.1,GeneID:1095720;Name=NP_624624.1;Note=SC5G9.05%2C possible transcriptional regulator%2C len: 193 aa%3B similar to several transcriptional regulators e.g. TR:Q54288 (EMBL:X86780) Streptomyces hygroscopicus regulator of antibiotic transport complexes (204 aa)%2C fasta scores%3B opt: 239 z-score: 291.2 E(): 7.5e-09%2C 31.9%25 identity in 182 aa overlap. Similar to TR:O54180 (EMBL:AL021411) S.coelicolor probable transcriptional regulator (203 aa) (35.2%25 identity in 165 aa overlap). Contains probable helix-turn-helix motif at aa 38-59 (Score 1242%2C +3.42 SD);gbkey=CDS;gene=SC5G9.05;product=transcriptional regulator;protein_id=NP_624624.1;transl_table=11
NC_003888.3	RefSeq	gene	291315	292592	.	+	.	ID=gene284;Dbxref=GeneID:1095721;Name=SC5G9.06;gbkey=Gene;gene=SC5G9.06;gene_biotype=protein_coding;gene_synonym=SC5G9.06;locus_tag=SCO0297
NC_003888.3	RefSeq	CDS	291315	292592	.	+	0	ID=cds272;Parent=gene284;Dbxref=Genbank:NP_624625.1,GeneID:1095721;Name=NP_624625.1;Note=SC5G9.06%2C possible hypothetical protein%2C len: 425 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains a probable N-terminal signal sequence;gbkey=CDS;gene=SC5G9.06;product=hypothetical protein;protein_id=NP_624625.1;transl_table=11
NC_003888.3	RefSeq	gene	292656	293519	.	-	.	ID=gene285;Dbxref=GeneID:1095722;Name=SC5G9.07c;gbkey=Gene;gene=SC5G9.07c;gene_biotype=protein_coding;gene_synonym=SC5G9.07c;locus_tag=SCO0298
NC_003888.3	RefSeq	CDS	292656	293519	.	-	0	ID=cds273;Parent=gene285;Dbxref=Genbank:NP_624626.1,GeneID:1095722;Name=NP_624626.1;Note=SC5G9.07c%2C probable lysR-family transcriptional regulator%2C len: 287 aa%3B similar to many e.g. SW:ALSR_BACSU (EMBL:L04470)%2C AlsR%2C Bacillus subtilis regulator of acetoin biosynthesis operon (302 aa)%2C fasta scores%3B opt: 424 z-score: 491.8 E(): 5e-20%2C 31.6%25 identity in 253 aa overlap. Contains probable helix-turn-helix motif at aa 20-41 (Score 1533%2C +4.41 SD). Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=CDS;gene=SC5G9.07c;product=LysR family transcriptional regulator;protein_id=NP_624626.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	293061	293504	.	-	.	ID=id288;Dbxref=GeneID:1095722;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 125.40%2C E-value 1.1e-33;gbkey=misc_feature;gene=SC5G9.07c
NC_003888.3	RefSeq	sequence_feature	293370	293462	.	-	.	ID=id289;Dbxref=GeneID:1095722;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC5G9.07c
NC_003888.3	RefSeq	gene	293613	294497	.	+	.	ID=gene286;Dbxref=GeneID:1095723;Name=SC5G9.08;gbkey=Gene;gene=SC5G9.08;gene_biotype=protein_coding;gene_synonym=SC5G9.08;locus_tag=SCO0299
NC_003888.3	RefSeq	CDS	293613	294497	.	+	0	ID=cds274;Parent=gene286;Dbxref=Genbank:NP_624627.1,GeneID:1095723;Name=NP_624627.1;Note=SC5G9.08%2C possible oxidoreductase%2C len: 294 aa%3B shows weak similarity to TR:P06632 (EMBL:M12799) Corynebacterium sp. 2%2C5-diketo-D-gluconic acid reductase (278 aa)%2C fasta scores%3B opt: 196 z-score: 229.3 E(): 2.1e-05%2C 27.6%25 identity in 286 aa overlap. Similar to many hypothetical oxidoreductases e.g. SW:YDBC_ECOLI (EMBL:X62680)%2C YbcD%2C Escherichia coli hypothetical oxidoreductase (286 aa) (63.3%25 identity in 283 aa overlap). Also similar to SC5H1.28C (EMBL:AL049863) Streptomyces coelicolor oxidoreductase (305 aa) (46.5%25 identity in 301 aa overlap);gbkey=CDS;gene=SC5G9.08;product=oxidoreductase;protein_id=NP_624627.1;transl_table=11
NC_003888.3	RefSeq	gene	294494	296305	.	-	.	ID=gene287;Dbxref=GeneID:1095724;Name=SC5G9.09c;gbkey=Gene;gene=SC5G9.09c;gene_biotype=protein_coding;gene_synonym=SC5G9.09c;locus_tag=SCO0300
NC_003888.3	RefSeq	CDS	294494	296305	.	-	0	ID=cds275;Parent=gene287;Dbxref=Genbank:NP_624628.1,GeneID:1095724;Name=NP_624628.1;Note=SC5G9.09c%2C probable monooxygenase%2C len: 603 aa%3B similar to several monooxygenases e.g. SW:CYMO_ACISP (EMBL:M19029) Acinetobacter sp cyclohexanone monooxygenase (542 aa)%2C fasta scores%3B opt: 643 z-score: 715.7 E(): 1.7e-32%2C 33.6%25 identity in 518 aa overlap. GC frameplot and codon usage plots suggest the presence of an approx. 50 aa N-terminal extension absent from similar sequences;gbkey=CDS;gene=SC5G9.09c;product=monooxygenase;protein_id=NP_624628.1;transl_table=11
NC_003888.3	RefSeq	gene	296471	297499	.	+	.	ID=gene288;Dbxref=GeneID:1095725;Name=SC5G9.10;gbkey=Gene;gene=SC5G9.10;gene_biotype=protein_coding;gene_synonym=SC5G9.10;locus_tag=SCO0301
NC_003888.3	RefSeq	CDS	296471	297499	.	+	0	ID=cds276;Parent=gene288;Dbxref=Genbank:NP_624629.1,GeneID:1095725;Name=NP_624629.1;Note=SC5G9.10%2C possible lipoprotein%2C len: 342 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains a probable N-terminal signal sequence and an appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC5G9.10;product=lipoprotein;protein_id=NP_624629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	296513	296545	.	+	.	ID=id290;Dbxref=GeneID:1095725;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC5G9.10
NC_003888.3	RefSeq	gene	297515	298108	.	-	.	ID=gene289;Dbxref=GeneID:1095726;Name=SC5G9.11c;gbkey=Gene;gene=SC5G9.11c;gene_biotype=protein_coding;gene_synonym=SC5G9.11c;locus_tag=SCO0302
NC_003888.3	RefSeq	CDS	297515	298108	.	-	0	ID=cds277;Parent=gene289;Dbxref=Genbank:NP_624630.1,GeneID:1095726;Name=NP_624630.1;Note=SC5G9.11c%2C possible tetR-family transcriptional regulator%2C len: 197 aa%3B shows weak similarity to A-factor receptors and their homologues e.g. TR:O66121 (EMBL:AB000384)%2C CprA%2C Streptomyces coelicolor A-factor receptor homologue involved in the regulation of secondary metabolism and morphogenesis (215 aa)%2C fasta scores%3B opt: 168 z-score: 202.3 E(): 0.00066%2C 30.1%25 identity in 193 aa overlap. Contains probable helix-turn-helix motif at aa 43-64 (Score 1686%2C +4.93 SD). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SC5G9.11c;product=TetR family transcriptional regulator;protein_id=NP_624630.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	297893	298030	.	-	.	ID=id291;Dbxref=GeneID:1095726;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 22.10%2C E-value 0.00021;gbkey=misc_feature;gene=SC5G9.11c
NC_003888.3	RefSeq	gene	298105	298311	.	-	.	ID=gene290;Dbxref=GeneID:1095727;Name=SC5G9.12c;gbkey=Gene;gene=SC5G9.12c;gene_biotype=protein_coding;gene_synonym=SC5G9.12c;locus_tag=SCO0303
NC_003888.3	RefSeq	CDS	298105	298311	.	-	0	ID=cds278;Parent=gene290;Dbxref=Genbank:NP_624631.1,GeneID:1095727;Name=NP_624631.1;Note=SC5G9.12c%2C hypothetical protein%2C len: 68 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SC5G9.12c;product=hypothetical protein;protein_id=NP_624631.1;transl_table=11
NC_003888.3	RefSeq	gene	298468	298836	.	-	.	ID=gene291;Dbxref=GeneID:1095728;Name=SC5G9.13c;gbkey=Gene;gene=SC5G9.13c;gene_biotype=protein_coding;gene_synonym=SC5G9.13c;locus_tag=SCO0304
NC_003888.3	RefSeq	CDS	298468	298836	.	-	0	ID=cds279;Parent=gene291;Dbxref=Genbank:NP_624632.1,GeneID:1095728;Name=NP_624632.1;Note=SC5G9.13c%2C unknown%2C len: 122 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SC5G9.13c;product=hypothetical protein;protein_id=NP_624632.1;transl_table=11
NC_003888.3	RefSeq	gene	299213	302092	.	+	.	ID=gene292;Dbxref=GeneID:1095729;Name=SC5G9.14;gbkey=Gene;gene=SC5G9.14;gene_biotype=protein_coding;gene_synonym=SC5G9.14;locus_tag=SCO0305
NC_003888.3	RefSeq	CDS	299213	302092	.	+	0	ID=cds280;Parent=gene292;Dbxref=Genbank:NP_624633.1,GeneID:1095729;Name=NP_624633.1;Note=SC5G9.14%2C hypothetical protein%2C len: 959 aa%3B unknown function%2C similar to TR:O54182 (EMBL:AL021411) Streptomyces coelicolor hypothetical protein (913 aa)%2C fasta scores%3B opt: 698 z-score: 776.6 E(): 0%2C 27.0%25 identity in 972 aa overlap. The C-terminus shows very weak similarity to eukaryotic beta-transducins e.g. SW:GBB4_MOUSE (EMBL:S86124)%2C gnb4%2C Mus musculus guanine nucleotide-binding protein beta subunit 4 (340 aa) (23.0%25 identity in 291 aa overlap). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC5G9.14;product=hypothetical protein;protein_id=NP_624633.1;transl_table=11
NC_003888.3	RefSeq	gene	302056	302961	.	-	.	ID=gene293;Dbxref=GeneID:1095730;Name=SC5G9.15c;gbkey=Gene;gene=SC5G9.15c;gene_biotype=pseudogene;gene_synonym=SC5G9.15c;locus_tag=SCO0306;pseudo=true
NC_003888.3	RefSeq	sequence_feature	302056	302961	.	-	.	ID=id292;Dbxref=GeneID:1095730;Note=SC5G9.15c%2C possible pseudogene%2C len: 302 aa%3B similar to hypothetical proteins e.g. SW:YCJY_ECOLI (EMBL:AE000230)%2C YcjY%2C Escherichia coli hypothetical protein (310 aa). GC frameplot and codon usage plots indicate a coding region which lacks a start codon%3Bpseudogene;gbkey=misc_feature;gene=SC5G9.15c
NC_003888.3	RefSeq	gene	303084	303971	.	+	.	ID=gene294;Dbxref=GeneID:1095731;Name=SC5G9.16;gbkey=Gene;gene=SC5G9.16;gene_biotype=protein_coding;gene_synonym=SC5G9.16;locus_tag=SCO0307
NC_003888.3	RefSeq	CDS	303084	303971	.	+	0	ID=cds281;Parent=gene294;Dbxref=Genbank:NP_624634.1,GeneID:1095731;Name=NP_624634.1;Note=SC5G9.16%2C possible DNA-binding protein%2C len: 295 aa%3B probable CDS suggested by GC frameplot and positional base preference. Similar to possible DNA-binding proteins from S. coelicolor e.g. SCJ9A.15c (cosmid SCJ9A)%2C S. coelicolor possible DNA-binding protein (290 aa) (39.3%25 identity in 298 aa overlap). Contains probable helix-turn-helix motif at residues 35-56 (Score 1197%2C +3.26 SD);gbkey=CDS;gene=SC5G9.16;product=DNA-binding protein;protein_id=NP_624634.1;transl_table=11
NC_003888.3	RefSeq	gene	304026	305429	.	+	.	ID=gene295;Dbxref=GeneID:1095732;Name=SC5G9.17;gbkey=Gene;gene=SC5G9.17;gene_biotype=protein_coding;gene_synonym=SC5G9.17;locus_tag=SCO0308
NC_003888.3	RefSeq	CDS	304026	305429	.	+	0	ID=cds282;Parent=gene295;Dbxref=Genbank:NP_624635.1,GeneID:1095732;Name=NP_624635.1;Note=SC5G9.17%2C possible membrane protein%2C len: 467 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains hydrophobic%2C possible membrane-spanning regions near the C-terminus. Contains TTA (leucine) codon%3B possible target for bldA regulation;gbkey=CDS;gene=SC5G9.17;product=hypothetical protein;protein_id=NP_624635.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	304434	304436	.	+	.	ID=id293;Dbxref=GeneID:1095732;Note=TTA (leucine) codon%3B possible target for bldA regulation;gbkey=misc_feature;gene=SC5G9.17
NC_003888.3	RefSeq	gene	305537	306625	.	-	.	ID=gene296;Dbxref=GeneID:1095733;Name=SC5G9.18c;gbkey=Gene;gene=SC5G9.18c;gene_biotype=protein_coding;gene_synonym=SC5G9.18c;locus_tag=SCO0309
NC_003888.3	RefSeq	CDS	305537	306625	.	-	0	ID=cds283;Parent=gene296;Dbxref=Genbank:NP_624636.1,GeneID:1095733;Name=NP_624636.1;Note=SC5G9.18c%2C probable amide hydrolase%2C len: 362 aa%3B similar to 6-aminohexanoate-dimer hydrolases which degrade N-(6-aminohexanoyl)-6-aminohexanoate e.g. TR:P75007 (EMBL:K02336)%2C NylB'%2C Flavobacterium sp. (strain K172) 6-aminohexanoic acid linear oligomer hydrolase (EII') (392 aa)%2C fasta scores%3B opt: 531 z-score: 598.0 E(): 6.1e-26%2C 34.1%25 identity in 323 aa overlap;gbkey=CDS;gene=SC5G9.18c;product=amide hydrolase;protein_id=NP_624636.1;transl_table=11
NC_003888.3	RefSeq	gene	306816	307466	.	-	.	ID=gene297;Dbxref=GeneID:1095734;Name=SC5G9.19c;gbkey=Gene;gene=SC5G9.19c;gene_biotype=protein_coding;gene_synonym=SC5G9.19c;locus_tag=SCO0310
NC_003888.3	RefSeq	CDS	306816	307466	.	-	0	ID=cds284;Parent=gene297;Dbxref=Genbank:NP_624637.1,GeneID:1095734;Name=NP_624637.1;Note=SC5G9.19c%2C possible tetR-family transcriptional regulator%2C len: 141 aa%3B shows similarity to the N-terminal half of TR:O24741 (EMBL:AB001683)%2C FarA%2C Streptomyces sp. strain FRI-5 receptor for an extracellular regulatory factor (IM-2) (221 aa)%2C fasta scores%3B opt: 154 z-score: 193.4 E(): 0.0021%2C 36.7%25 identity in 79 aa overlap and to  transcriptional regulators. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SC5G9.19c;product=TetR family transcriptional regulator;protein_id=NP_624637.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	307278	307418	.	-	.	ID=id294;Dbxref=GeneID:1095734;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 31.50%2C E-value 5.4e-07;gbkey=misc_feature;gene=SC5G9.19c
NC_003888.3	RefSeq	gene	307575	309131	.	+	.	ID=gene298;Dbxref=GeneID:1095735;Name=SC5G9.20;gbkey=Gene;gene=SC5G9.20;gene_biotype=protein_coding;gene_synonym=SC5G9.20;locus_tag=SCO0311
NC_003888.3	RefSeq	CDS	307575	309131	.	+	0	ID=cds285;Parent=gene298;Dbxref=Genbank:NP_624638.1,GeneID:1095735;Name=NP_624638.1;Note=SC5G9.20%2C probable ligase%2C len: 518 aa%3B similar to domains within polyketide synthases e.g. to the N-terminus of TR:Q54297 (EMBL:X86780)%2C RapA%2C Streptomyces hygroscopicus polyketide synthase (8563 aa)%2C fasta scores%3B opt: 815 z-score: 894.4 E(): 0%2C 34.0%25 identity in 509 aa overlap and to SW:DHBE_BACSU (EMBL:U26444)%2C DhbE%2C EntE%2C Bacillus subtilis 2%2C3-dihydroxybenzoate-AMP ligase (539 aa) (31.3%25 identity in 520 aa overlap). Also similar to others from S. coelicolor e.g. TR:Q9Z5A6 (EMBL:AL035478) S. coelicolor probable long-chain-fatty-acid-CoA ligase (541 aa) (35.9%25 identity in 537 aa overlap). Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and PS00455  AMP-binding domain signature;gbkey=CDS;gene=SC5G9.20;product=ligase;protein_id=NP_624638.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	307656	308894	.	+	.	ID=id295;Dbxref=GeneID:1095735;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 140.40%2C E-value 3.1e-38;gbkey=misc_feature;gene=SC5G9.20
NC_003888.3	RefSeq	sequence_feature	308055	308090	.	+	.	ID=id296;Dbxref=GeneID:1095735;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC5G9.20
NC_003888.3	RefSeq	gene	309147	310316	.	+	.	ID=gene299;Dbxref=GeneID:1095736;Name=SC5G9.21;gbkey=Gene;gene=SC5G9.21;gene_biotype=protein_coding;gene_synonym=SC5G9.21;locus_tag=SCO0312
NC_003888.3	RefSeq	CDS	309147	310316	.	+	0	ID=cds286;Parent=gene299;Dbxref=Genbank:NP_624639.1,GeneID:1095736;Name=NP_624639.1;Note=SC5G9.21%2C probable acyl-CoA dehydrogenase%2C len: 389 aa%3B similar to both bacterial and eukaryotic acyl-CoA dehydrogenases e.g. SW:ACDS_HUMAN (EMBL:M26393)%2C AcaDS%2C Homo sapiens mitochondrial acyl-CoA dehydrogenase short-chain specific precursor (412 aa)%2C fasta scores%3B opt: 653 z-score: 771.4 E(): 0%2C 34.8%25 identity in 376 aa overlap. Also similar to SCI30A.22C (EMBL:AL096811) Streptomyces coelicolor probable acyl-CoA dehydrogenase. Contains 2 Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase;gbkey=CDS;gene=SC5G9.21;product=acyl-CoA dehydrogenase;protein_id=NP_624639.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	309294	309758	.	+	.	ID=id297;Dbxref=GeneID:1095736;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 109.50%2C E-value 2.6e-31;gbkey=misc_feature;gene=SC5G9.21
NC_003888.3	RefSeq	sequence_feature	309813	310304	.	+	.	ID=id298;Dbxref=GeneID:1095736;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 155.40%2C E-value 9.4e-45;gbkey=misc_feature;gene=SC5G9.21
NC_003888.3	RefSeq	ribosome_entry_site	310367	310371	.	+	.	ID=id299;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	310378	311727	.	+	.	ID=gene300;Dbxref=GeneID:1095737;Name=SC5G9.22;gbkey=Gene;gene=SC5G9.22;gene_biotype=protein_coding;gene_synonym=SC5G9.22;locus_tag=SCO0313
NC_003888.3	RefSeq	CDS	310378	311727	.	+	0	ID=cds287;Parent=gene300;Dbxref=Genbank:NP_624640.1,GeneID:1095737;Name=NP_624640.1;Note=SC5G9.22%2C probable transmembrane transport protein%2C len: 449 aa%3B similar to many transmembrane transporters e.g. SW:DGOT_ECOLI (EMBL:L10328)%2C dgoT%2C Escherichia coli D-galactonate transporter (445 aa)%2C fasta scores%3B opt: 332 z-score: 376.2 E(): 1.4e-13%2C 23.7%25 identity in 438 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter;gbkey=CDS;gene=SC5G9.22;product=transmembrane transport protein;protein_id=NP_624640.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	310462	311700	.	+	.	ID=id300;Dbxref=GeneID:1095737;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -70.60%2C E-value 0.00025;gbkey=misc_feature;gene=SC5G9.22
NC_003888.3	RefSeq	gene	311724	313670	.	+	.	ID=gene301;Dbxref=GeneID:1095738;Name=SC5G9.23;gbkey=Gene;gene=SC5G9.23;gene_biotype=protein_coding;gene_synonym=SC5G9.23;locus_tag=SCO0314
NC_003888.3	RefSeq	CDS	311724	313670	.	+	0	ID=cds288;Parent=gene301;Dbxref=Genbank:NP_624641.1,GeneID:1095738;Name=NP_624641.1;Note=SC5G9.23%2C hypothetical protein%2C len: 648 aa%3B unknown function%2C similar to TR:Q52556 (EMBL:M86744)%2C SdsA%2C Pseudomonas sp. alkyl sulfatase which degrades sulfate esters of long-chain primary alcohols (SDS) (528 aa)%2C fasta scores%3B opt: 739 z-score: 806.7 E(): 0%2C 29.7%25 identity in 528 aa overlap%2C but having an N-terminal extension of approx. 140 aa. Similar to TR:Q48790 (EMBL:X92423)%2C SepA%2C Listeria monocytogenes gene implicated in cell separation (391 aa) (42.6%25 identity in 364 aa overlap). Also similar to hypothetical proteins e.g. TR:O69728 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical protein (626 aa) (52.9%25 identity in 624 aa overlap). Contains Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily. Contains possible N-terminal region signal sequence peptide;gbkey=CDS;gene=SC5G9.23;product=hypothetical protein;protein_id=NP_624641.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	312090	312773	.	+	.	ID=id301;Dbxref=GeneID:1095738;Note=Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily%2C score 69.40%2C E-value 7.3e-17;gbkey=misc_feature;gene=SC5G9.23
NC_003888.3	RefSeq	gene	313697	315055	.	-	.	ID=gene302;Dbxref=GeneID:1095739;Name=SC5G9.24c;gbkey=Gene;gene=SC5G9.24c;gene_biotype=protein_coding;gene_synonym=SC5G9.24c;locus_tag=SCO0315
NC_003888.3	RefSeq	CDS	313697	315055	.	-	0	ID=cds289;Parent=gene302;Dbxref=Genbank:NP_624642.1,GeneID:1095739;Name=NP_624642.1;Note=SC5G9.24c%2C probable decarboxylase%2C len: 452 aa%3B similar to many e.g. SW:DCDA_BACSU (EMBL:L09228)%2C LysA%2C Bacillus subtilis diaminopimelate decarboxylase (441 aa)%2C fasta scores%3B opt: 484 z-score: 542.1 E(): 7.9e-23%2C 31.6%25 identity in 389 aa overlap. Similar to TR:Q9ZBH5 (EMBL:AL035206)%2C DcdA%2C Streptomyces coelicolor diaminopimelate decarboxylase (440 aa)%2C fasta scores%3B opt: 400 z-score: 384.5 E(): 3.6e-16%2C 30.2%25 identity in 427 aa overlap. Contains 2 Pfam matches to entry PF00278 Orn_DAP_Arg_deC%2C Pyridoxal-dependent decarboxylase%2C PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2 and PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site;gbkey=CDS;gene=SC5G9.24c;product=decarboxylase;protein_id=NP_624642.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	313859	314020	.	-	.	ID=id302;Dbxref=GeneID:1095739;Note=Pfam match to entry PF00278 Orn_DAP_Arg_deC%2C Pyridoxal-dependent decarboxylase%2C score 28.10%2C E-value 1.2e-07;gbkey=misc_feature;gene=SC5G9.24c
NC_003888.3	RefSeq	sequence_feature	314105	314905	.	-	.	ID=id303;Dbxref=GeneID:1095739;Note=Pfam match to entry PF00278 Orn_DAP_Arg_deC%2C Pyridoxal-dependent decarboxylase%2C score 135.90%2C E-value 7.7e-40;gbkey=misc_feature;gene=SC5G9.24c
NC_003888.3	RefSeq	sequence_feature	314312	314356	.	-	.	ID=id304;Dbxref=GeneID:1095739;Note=PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2;gbkey=misc_feature;gene=SC5G9.24c
NC_003888.3	RefSeq	sequence_feature	314816	314872	.	-	.	ID=id305;Dbxref=GeneID:1095739;Note=PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site;gbkey=misc_feature;gene=SC5G9.24c
NC_003888.3	RefSeq	gene	315254	316921	.	-	.	ID=gene303;Dbxref=GeneID:1095740;Name=SC5G9.25c;gbkey=Gene;gene=SC5G9.25c;gene_biotype=protein_coding;gene_synonym=SC5G9.25c;locus_tag=SCO0316
NC_003888.3	RefSeq	CDS	315254	316921	.	-	0	ID=cds290;Parent=gene303;Dbxref=Genbank:NP_624643.1,GeneID:1095740;Name=NP_624643.1;Note=SC5G9.25c%2C hypothetical protein%2C len: 555 aa%3B similar to hypothetical proteins e.g. TR:O50442 (EMBL:AL010186) Mycobacterium tuberculosis hypothetical protein (538 aa)%2C fasta scores%3B opt: 485 z-score: 521.2 E(): 1.2e-21%2C 32.6%25 identity in 568 aa overlap and to TR:Q9Z561 (EMBL:AL035569) S.coelicolor transcriptional regulator (415 aa) (28.4%25 identity in 444 aa overlap). Contains probable helix-turn-helix motif at aa 505-526 (Score 1081%2C +2.87 SD);gbkey=CDS;gene=SC5G9.25c;product=DNA-binding protein;protein_id=NP_624643.1;transl_table=11
NC_003888.3	RefSeq	gene	316975	318237	.	-	.	ID=gene304;Dbxref=GeneID:1095741;Name=SC5G9.26c;gbkey=Gene;gene=SC5G9.26c;gene_biotype=protein_coding;gene_synonym=SC5G9.26c;locus_tag=SCO0317
NC_003888.3	RefSeq	CDS	316975	318237	.	-	0	ID=cds291;Parent=gene304;Dbxref=Genbank:NP_624644.1,GeneID:1095741;Name=NP_624644.1;Note=SC5G9.26c%2C probable transmembrane transport protein%2C len: 420 aa%3B shows weak similarity to many efflux pumps e.g. SW:CMLR_STRLI (EMBL:X59968)%2C cmlR%2C Streptomyces lividans chloramphenicol resistance protein (392 aa)%2C fasta scores%3B opt: 276 z-score: 292.9 E(): 6e-09%2C 27.3%25 identity in 407 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC5G9.26c;product=transmembrane transport protein;protein_id=NP_624644.1;transl_table=11
NC_003888.3	RefSeq	gene	318329	319345	.	-	.	ID=gene305;Dbxref=GeneID:1095742;Name=SC5G9.27c;gbkey=Gene;gene=SC5G9.27c;gene_biotype=protein_coding;gene_synonym=SC5G9.27c;locus_tag=SCO0318
NC_003888.3	RefSeq	CDS	318329	319345	.	-	0	ID=cds292;Parent=gene305;Dbxref=Genbank:NP_624645.1,GeneID:1095742;Name=NP_624645.1;Note=SC5G9.27c%2C possible oxidoreductase%2C len: 388 aa%3B shows weak similarity to many eukaryotic and bacterial oxidoreductases e.g. TR:Q39617 (EMBL:U36752)%2C LpcR-1%2C Chlamydomonas reinhardtii NADPH:protochlorophyllide oxidoreductase (397 aa)%2C fasta scores%3B opt: 278 z-score: 296.3 E(): 3.8e-09%2C 27.4%25 identity in 343 aa overlap. Similar to TR:O53726 (EMBL:AL021932) Mycobacterium tuberculosis oxidoreductase (311 aa) (41.1%25 identity in 309 aa overlap). Similar to others from S. coelicolor e.g. SCJ9A.19c (cosmid SCJ9A)%2C possible oxidoreductase (311 aa) (39.6%25 identity in 303 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=SC5G9.27c;product=oxidoreductase;protein_id=NP_624645.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	318626	319228	.	-	.	ID=id306;Dbxref=GeneID:1095742;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 70.30%2C E-value 4e-17;gbkey=misc_feature;gene=SC5G9.27c
NC_003888.3	RefSeq	gene	319499	320008	.	-	.	ID=gene306;Dbxref=GeneID:1095743;Name=SC5G9.28c;gbkey=Gene;gene=SC5G9.28c;gene_biotype=protein_coding;gene_synonym=SC5G9.28c;locus_tag=SCO0319
NC_003888.3	RefSeq	CDS	319499	320008	.	-	0	ID=cds293;Parent=gene306;Dbxref=Genbank:NP_624646.1,GeneID:1095743;Name=NP_624646.1;Note=SC5G9.28c%2C unknown%2C len: 169 aa%3B probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SC5G9.28c;product=hypothetical protein;protein_id=NP_624646.1;transl_table=11
NC_003888.3	RefSeq	gene	320110	320583	.	+	.	ID=gene307;Dbxref=GeneID:1095744;Name=SC5G9.29;gbkey=Gene;gene=SC5G9.29;gene_biotype=protein_coding;gene_synonym=SC5G9.29;locus_tag=SCO0320
NC_003888.3	RefSeq	CDS	320110	320583	.	+	0	ID=cds294;Parent=gene307;Dbxref=Genbank:NP_624647.1,GeneID:1095744;Name=NP_624647.1;Note=SC5G9.29%2C hypothetical protein%2C len: 157 aa%3B similar to the C-terminal half of SW:QOR_PSEAE (EMBL:X85015)%2C qor%2C Pseudomonas aeruginosa quinone oxidoreductase (325 aa)%2C fasta scores%3B opt: 223 z-score: 254.4 E(): 8.3e-07%2C 34.8%25 identity in 161 aa overlap and the corresponding region of many similar hypothetical proteins. Also similar to regions of polyketide synthase-type proteins e.g. SW:MCAS_MYCBO (EMBL:M95808)%2C mas%2C Mycobacterium bovis mycocerosic acid synthase (2110 aa) (35.8%25 identity in 159 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC5G9.29;product=hypothetical protein;protein_id=NP_624647.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	320536	320559	.	+	.	ID=id307;Dbxref=GeneID:1095744;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5G9.29
NC_003888.3	RefSeq	gene	320699	322255	.	+	.	ID=gene308;Dbxref=GeneID:1095745;Name=SC5G9.30;gbkey=Gene;gene=SC5G9.30;gene_biotype=protein_coding;gene_synonym=SC5G9.30;locus_tag=SCO0321
NC_003888.3	RefSeq	CDS	320699	322255	.	+	0	ID=cds295;Parent=gene308;Dbxref=Genbank:NP_624648.1,GeneID:1095745;Name=NP_624648.1;Note=SC5G9.30%2C probable carboxylesterase%2C len: 518 aa%3B similar to many eukaryotic and bacterial e.g. SW:PNBA_BACSU (EMBL:U06089)%2C PrnbA%2C Bacillus subtilis 4-nitrobenzyl esterase (489 aa)%2C fasta scores%3B opt: 718 z-score: 774.9 E(): 0%2C 36.3%25 identity in 479 aa overlap. Similar to TR:Q9Z545 (EMBL:AL035212) Streptomyces coelicolor probable carboxylesterase (502 aa) (41.3%25 identity in 521 aa overlap). Contains 2 Pfam matches to entry PF00135 COesterase%2C Carboxylesterases and PS00122 Carboxylesterases type-B serine active site;gbkey=CDS;gene=SC5G9.30;product=carboxylesterase;protein_id=NP_624648.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	320735	321658	.	+	.	ID=id308;Dbxref=GeneID:1095745;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterases%2C score 250.70%2C E-value 2.9e-72;gbkey=misc_feature;gene=SC5G9.30
NC_003888.3	RefSeq	sequence_feature	321236	321283	.	+	.	ID=id309;Dbxref=GeneID:1095745;Note=PS00122 Carboxylesterases type-B serine active site;gbkey=misc_feature;gene=SC5G9.30
NC_003888.3	RefSeq	sequence_feature	321944	322186	.	+	.	ID=id310;Dbxref=GeneID:1095745;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterases%2C score 12.90%2C E-value 0.0041;gbkey=misc_feature;gene=SC5G9.30
NC_003888.3	RefSeq	gene	322244	323938	.	-	.	ID=gene309;Dbxref=GeneID:1095746;Name=SC5G9.31c;gbkey=Gene;gene=SC5G9.31c;gene_biotype=protein_coding;gene_synonym=SC5G9.31c,SCF12.01c;locus_tag=SCO0322
NC_003888.3	RefSeq	CDS	322244	323938	.	-	0	ID=cds296;Parent=gene309;Dbxref=Genbank:NP_733498.1,GeneID:1095746;Name=NP_733498.1;Note=SCF12.01c%2C possible ABC transport ATP-binding subunit%2C len: >230aa%3B similar to many eg. SW:TLRC_STRFR tylosin resistance ATP-binding protein from Streptomyces fradiae (548 aa) fasta scores%3B opt: 1017%2C z-score: 1131.8%2C E(): 0%2C (69.0%25 identity in 232 aa overlap). Contains Prosite match to PS00211 ABC transporters family signature and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).~SC5G9.31c%2C probable ABC-transporter ATP-binding protein%2C partial CDS%2C len: >371 aa%3B similar ATP-binding components from antibiotic resistance export systems e.g. SW:TLRC_STRFR (EMBL:M57437)%2C tlrC%2C Streptomyces fradiae tylosin resistance ATP-binding protein (548 aa)%2C fasta scores%3B opt: 1517 z-score: 1597.3 E(): 0%2C 67.4%25 identity in 356 aa overlap. Also similar to many other  ABC-transporter ATP-binding proteins. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC5G9.31c;product=ABC transport ATP-binding subunit;protein_id=NP_733498.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	322310	322798	.	-	.	ID=id311;Dbxref=GeneID:1095746;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 144.30%2C E-value 2.1e-39;gbkey=misc_feature;gene=SC5G9.31c
NC_003888.3	RefSeq	sequence_feature	322484	322528	.	-	.	ID=id312;Dbxref=GeneID:1095746;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC5G9.31c
NC_003888.3	RefSeq	sequence_feature	322754	322777	.	-	.	ID=id313;Dbxref=GeneID:1095746;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5G9.31c
NC_003888.3	RefSeq	sequence_feature	323411	323455	.	-	.	ID=id314;Dbxref=GeneID:1095746;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC5G9.31c
NC_003888.3	RefSeq	sequence_feature	323804	323827	.	-	.	ID=id315;Dbxref=GeneID:1095746;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC5G9.31c
NC_003888.3	RefSeq	gene	324467	325069	.	-	.	ID=gene310;Dbxref=GeneID:1095747;Name=SCF12.02c;gbkey=Gene;gene=SCF12.02c;gene_biotype=protein_coding;gene_synonym=SCF12.02c;locus_tag=SCO0323
NC_003888.3	RefSeq	CDS	324467	325069	.	-	0	ID=cds297;Parent=gene310;Dbxref=Genbank:NP_624649.1,GeneID:1095747;Name=NP_624649.1;Note=SCF12.02c%2C unknown%2C len: 200aa;gbkey=CDS;gene=SCF12.02c;product=hypothetical protein;protein_id=NP_624649.1;transl_table=11
NC_003888.3	RefSeq	gene	325238	327616	.	-	.	ID=gene311;Dbxref=GeneID:1095748;Name=SCF12.03c;gbkey=Gene;gene=SCF12.03c;gene_biotype=protein_coding;gene_synonym=SCF12.03c;locus_tag=SCO0324
NC_003888.3	RefSeq	CDS	325238	327616	.	-	0	ID=cds298;Parent=gene311;Dbxref=Genbank:NP_624650.1,GeneID:1095748;Name=NP_624650.1;Note=SCF12.03c%2C possible hypothetical protein%2C len: 799 aa%3B similar to TR:CAC45838 (EMBL:AL591786) Rhizobium meliloti (Sinorhizobium meliloti) hypothetical transmembrane protein (fragment) SMC01907%2C 729 aa%3B fasta scores: opt: 492 Z-score: 517.1 E(): 3.6e-21%3B 42.318%25 identity in 742 aa overlap. Contains possible cleavable N-terminal signal sequence;gbkey=CDS;gene=SCF12.03c;product=hypothetical protein;protein_id=NP_624650.1;transl_table=11
NC_003888.3	RefSeq	gene	327899	328264	.	+	.	ID=gene312;Dbxref=GeneID:1095749;Name=SCF12.04;gbkey=Gene;gene=SCF12.04;gene_biotype=protein_coding;gene_synonym=SCF12.04;locus_tag=SCO0325
NC_003888.3	RefSeq	CDS	327899	328264	.	+	0	ID=cds299;Parent=gene312;Dbxref=Genbank:NP_624651.1,GeneID:1095749;Name=NP_624651.1;Note=SCF12.04%2C unknown%2C len: 121aa;gbkey=CDS;gene=SCF12.04;product=hypothetical protein;protein_id=NP_624651.1;transl_table=11
NC_003888.3	RefSeq	gene	328333	329301	.	+	.	ID=gene313;Dbxref=GeneID:1095750;Name=SCF12.05;gbkey=Gene;gene=SCF12.05;gene_biotype=protein_coding;gene_synonym=SCF12.05;locus_tag=SCO0326
NC_003888.3	RefSeq	CDS	328333	329301	.	+	0	ID=cds300;Parent=gene313;Dbxref=Genbank:NP_624652.1,GeneID:1095750;Name=NP_624652.1;Note=SCF12.05%2C hypothetical protein%2C len: 322 aa%3B similar to TR:O54173 (EMBL:AL021411) hypothetical protein from Streptomyces coelicolor (382 aa) fasta scores%3B E(): 6.7e-12%2C 34.2%25 identity in 371 aa overlap.;gbkey=CDS;gene=SCF12.05;product=hypothetical protein;protein_id=NP_624652.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	329297	330194	.	+	.	ID=id316;Note=Insertion element IS1650. Also present at 35521-36418bp on Streptomyces coelicolor cosmid SC6G9.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	329297	329317	.	+	.	ID=id317;Note=Part of inverted repeat bounding insertion element IS1650.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	329321	330174	.	+	.	ID=gene314;Dbxref=GeneID:1095751;Name=SCF12.06;gbkey=Gene;gene=SCF12.06;gene_biotype=pseudogene;gene_synonym=SCF12.06,SCF12.07;locus_tag=SCO0328;pseudo=true
NC_003888.3	RefSeq	sequence_feature	329321	330174	.	+	.	ID=id318;Dbxref=GeneID:1095751;Note=SCF12.07%2C partial CDS%2C insertion element IS1650 transposase%2C len: 148 aa%3B similar to many transposases. Identical to TR:CAB45627 (EMBL:AL079356) insertion element IS1650 transposase from Streptomyces coelicolor (136 aa) fasta scores%3B opt: 999%2C z-score: 1255.4%2C E(): 0%2C 99.3%25 identity in 148 aa overlap. Complete protein probably translated by ribosomal frameshifting from the upstream CDS.~SCF12.06%2C partial CDS%2C insertion element IS1650 transposase%2C len: 136 aa%3B similar to many transposases. Identical to TR:CAB45627 (EMBL:AL079356) insertion element IS1650 transposase from Streptomyces coelicolor (136 aa) fasta scores%3B opt: 952%2C z-score: 1212.6 E(): 0%2C 99.3%25 identity in 136 aa overlap. Contains Pfam match to entry PF01511 Transposase_6. Complete protein probably translated by ribosomal frameshifting into the downstream CDS.%3Binsertion element IS1650 transposase;gbkey=misc_feature;gene=SCF12.06
NC_003888.3	RefSeq	sequence_feature	329441	329701	.	+	.	ID=id319;Dbxref=GeneID:1095751;Note=Pfam match to entry PF01511 Transposase_6.;gbkey=misc_feature;gene=SCF12.06
NC_003888.3	RefSeq	repeat_region	330174	330194	.	-	.	ID=id320;Note=Part of inverted repeat bounding insertion element IS1650.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	330235	331365	.	+	.	ID=gene315;Dbxref=GeneID:1095752;Name=SCF12.08;gbkey=Gene;gene=SCF12.08;gene_biotype=protein_coding;gene_synonym=SCF12.08;locus_tag=SCO0329
NC_003888.3	RefSeq	CDS	330235	331365	.	+	0	ID=cds301;Parent=gene315;Dbxref=Genbank:NP_624653.1,GeneID:1095752;Name=NP_624653.1;Note=SCF12.08%2C possible esterase len: 376 aa%3B similar to many e.g. TR:O87861 (EMBL:Z15137) esterase A from Streptomyces chrysomallus (389 aa) fasta scores%3B opt: 503%2C z-score: 581.9%2C E(): 4.6e-25%2C 34.9%25 identity in 378 aa overlap;gbkey=CDS;gene=SCF12.08;product=esterase;protein_id=NP_624653.1;transl_table=11
NC_003888.3	RefSeq	gene	331504	332253	.	+	.	ID=gene316;Dbxref=GeneID:1095753;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;gene_synonym=SCF12.09;locus_tag=SCO0330
NC_003888.3	RefSeq	CDS	331504	332253	.	+	0	ID=cds302;Parent=gene316;Dbxref=Genbank:NP_624654.1,GeneID:1095753;Name=NP_624654.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=NP_624654.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	331525	332085	.	+	.	ID=id321;Dbxref=GeneID:1095753;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 175.50%2C E-value 8.5e-49;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	331936	332022	.	+	.	ID=id322;Dbxref=GeneID:1095753;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	332146	332235	.	+	.	ID=id323;Dbxref=GeneID:1095753;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 33.90%2C E-value 3.8e-06;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	gene	332311	333210	.	+	.	ID=gene317;Dbxref=GeneID:1095754;Name=SCF12.10;gbkey=Gene;gene=SCF12.10;gene_biotype=protein_coding;gene_synonym=SCF12.10;locus_tag=SCO0331
NC_003888.3	RefSeq	CDS	332311	333210	.	+	0	ID=cds303;Parent=gene317;Dbxref=Genbank:NP_624655.1,GeneID:1095754;Name=NP_624655.1;Note=SCF12.10%2C possible short chain oxidoreductase ( hypothetical protein)%2C len: 299 aa%3B similar to many e.g. TR:CAB51136 (EMBL:Y18817) short chain oxidoreductase from actinorhodin biosynthesis cluster of Streptomyces coelicolor (276 aa) fasta scores%3B opt: 358%2C z-score: 403.3%2C E(): 4.1e-15%2C 34.6%25 identity in 280 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=SCF12.10;product=short chain oxidoreductase;protein_id=NP_624655.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	332326	332898	.	+	.	ID=id324;Dbxref=GeneID:1095754;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 123.30%2C E-value 4.4e-33;gbkey=misc_feature;gene=SCF12.10
NC_003888.3	RefSeq	gene	333529	334149	.	+	.	ID=gene318;Dbxref=GeneID:1095755;Name=SCF12.11;gbkey=Gene;gene=SCF12.11;gene_biotype=protein_coding;gene_synonym=SCF12.11;locus_tag=SCO0332
NC_003888.3	RefSeq	CDS	333529	334149	.	+	0	ID=cds304;Parent=gene318;Dbxref=Genbank:NP_624656.1,GeneID:1095755;Name=NP_624656.1;Note=SCF12.11%2C possible transcriptional regulator%2C len: 206 aa%3B similar to many e.g. TR:AAD31815 (EMBL:AF129856) transcriptional repressor from Pseudomonas fluorescens (208 aa) fasta scores%3B opt: 275%2C z-score: 343.1%2C E(): 9.3e-12%2C 30.0%25 identity in 200 aa overlap. Contains probable helix-turn-helix motif (+5.38 SD) 45-66aa.;gbkey=CDS;gene=SCF12.11;product=transcriptional regulator;protein_id=NP_624656.1;transl_table=11
NC_003888.3	RefSeq	gene	334223	335734	.	-	.	ID=gene319;Dbxref=GeneID:1095756;Name=SCF12.12c;gbkey=Gene;gene=SCF12.12c;gene_biotype=protein_coding;gene_synonym=SCF12.12c;locus_tag=SCO0333
NC_003888.3	RefSeq	CDS	334223	335734	.	-	0	ID=cds305;Parent=gene319;Dbxref=Genbank:NP_624657.1,GeneID:1095756;Name=NP_624657.1;Note=SCF12.12c%2C possible dioxygenase (hypothetical protein)%2C len: 503 aa%3B similar to many of undefined function and to TR:Q53353 (EMBL:S65040) lignostilbene-alpha%2Cbeta-dioxygenase from Pseudomonas paucimobilis (485 aa) fasta scores%3B opt: 529%2C z-score: 596.3%2C E(): 7.3e-26%2C (31.6%25 identity in 493 aa overlap);gbkey=CDS;gene=SCF12.12c;product=dioxygenase;protein_id=NP_624657.1;transl_table=11
NC_003888.3	RefSeq	gene	335948	336292	.	+	.	ID=gene320;Dbxref=GeneID:1095757;Name=SCF12.13;gbkey=Gene;gene=SCF12.13;gene_biotype=protein_coding;gene_synonym=SCF12.13;locus_tag=SCO0334
NC_003888.3	RefSeq	CDS	335948	336292	.	+	0	ID=cds306;Parent=gene320;Dbxref=Genbank:NP_624658.1,GeneID:1095757;Name=NP_624658.1;Note=SCF12.13%2C hypothetical protein%2C len: 111 aa;gbkey=CDS;gene=SCF12.13;product=hypothetical protein;protein_id=NP_624658.1;transl_table=11
NC_003888.3	RefSeq	gene	336333	339467	.	+	.	ID=gene321;Dbxref=GeneID:1095758;Name=SCF12.14;gbkey=Gene;gene=SCF12.14;gene_biotype=protein_coding;gene_synonym=SCF12.14;locus_tag=SCO0335
NC_003888.3	RefSeq	CDS	336333	339467	.	+	0	ID=cds307;Parent=gene321;Dbxref=Genbank:NP_624659.1,GeneID:1095758;Name=NP_624659.1;Note=SCF12.14%2C hypothetical protein%2C len: 1044 aa;gbkey=CDS;gene=SCF12.14;product=hypothetical protein;protein_id=NP_624659.1;transl_table=11
NC_003888.3	RefSeq	gene	339521	340630	.	-	.	ID=gene322;Dbxref=GeneID:1095759;Name=SCF12.15c;gbkey=Gene;gene=SCF12.15c;gene_biotype=protein_coding;gene_synonym=SCF12.15c;locus_tag=SCO0336
NC_003888.3	RefSeq	CDS	339521	340630	.	-	0	ID=cds308;Parent=gene322;Dbxref=Genbank:NP_624660.1,GeneID:1095759;Name=NP_624660.1;Note=SCF12.15c%2C possible integral membrane protein%2C len: 369aa%3B contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCF12.15c;product=hypothetical protein;protein_id=NP_624660.1;transl_table=11
NC_003888.3	RefSeq	gene	340752	341318	.	+	.	ID=gene323;Dbxref=GeneID:1095760;Name=SCF12.16;gbkey=Gene;gene=SCF12.16;gene_biotype=protein_coding;gene_synonym=SCF12.16;locus_tag=SCO0337
NC_003888.3	RefSeq	CDS	340752	341318	.	+	0	ID=cds309;Parent=gene323;Dbxref=Genbank:NP_624661.1,GeneID:1095760;Name=NP_624661.1;Note=SCF12.16%2C probable transcriptional regulator%2C len: 188 aa%3B similar to many transcriptional regulators from Streptomyces spp. e.g. SW:TCMR_STRGA tetracenomycin C transcriptional repressor from Streptomyces glaucescens (226 aa) fasta scores%3B opt: 152%2C z-score: 176.0%2C E(): 0.019%2C 28.1%25 identity in 203 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif (+3.98 SD) 29-50aa.;gbkey=CDS;gene=SCF12.16;product=transcriptional regulator;protein_id=NP_624661.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	340785	340916	.	+	.	ID=id325;Dbxref=GeneID:1095760;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 33.50%2C E-value 1.4e-07;gbkey=misc_feature;gene=SCF12.16
NC_003888.3	RefSeq	gene	341370	341909	.	-	.	ID=gene324;Dbxref=GeneID:1095761;Name=SCF12.17c;gbkey=Gene;gene=SCF12.17c;gene_biotype=protein_coding;gene_synonym=SCF12.17c;locus_tag=SCO0338
NC_003888.3	RefSeq	CDS	341370	341909	.	-	0	ID=cds310;Parent=gene324;Dbxref=Genbank:NP_624662.1,GeneID:1095761;Name=NP_624662.1;Note=SCF12.17c%2C possible dehydrogenase%2C len: 179 aa%3B similar to the C-terminal many proposed glucose-6-phosphate dehydrogenase eg. TR:AAD36231 (EMBL:AE001772) from Thermotoga maritima (496 aa) fasta scores%3B opt: 314%2C z-score: 381.8%2C E(): 6.5e-14%2C (42.5%25 identity in 146 aa overlap). Contains Pfam match to entry PF00479 G6PD%2C Glucose-6-phosphate dehydrogenase.;gbkey=CDS;gene=SCF12.17c;product=dehydrogenase;protein_id=NP_624662.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	341442	341603	.	-	.	ID=id326;Dbxref=GeneID:1095761;Note=Pfam match to entry PF00479 G6PD%2C Glucose-6-phosphate dehydrogenase%2C score 59.80%2C E-value 4.1e-19;gbkey=misc_feature;gene=SCF12.17c
NC_003888.3	RefSeq	gene	341992	342561	.	+	.	ID=gene325;Dbxref=GeneID:1095762;Name=SCF12.18;gbkey=Gene;gene=SCF12.18;gene_biotype=protein_coding;gene_synonym=SCF12.18;locus_tag=SCO0339
NC_003888.3	RefSeq	CDS	341992	342561	.	+	0	ID=cds311;Parent=gene325;Dbxref=Genbank:NP_624663.1,GeneID:1095762;Name=NP_624663.1;Note=SCF12.18%2C possible dehydrogenase%2C len: 189 aa%3B similar to a region from many proposed dehydrogenases e.g. SW:SERA_METJA D-3-phosphoglycerate dehydrogenase from Methanococcus jannaschii (524 aa) fasta scores%3B opt: 415%2C z-score: 508.1%2C E(): 6e-21%2C 40.8%25 identity in 179 aa overlap. Contains Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases;gbkey=CDS;gene=SCF12.18;product=dehydrogenase;protein_id=NP_624663.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	341992	342420	.	+	.	ID=id327;Dbxref=GeneID:1095762;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 106.10%2C E-value 4e-43;gbkey=misc_feature;gene=SCF12.18
NC_003888.3	RefSeq	gene	342578	343165	.	-	.	ID=gene326;Dbxref=GeneID:1095763;Name=SCF12.19c;gbkey=Gene;gene=SCF12.19c;gene_biotype=protein_coding;gene_synonym=SCF12.19c;locus_tag=SCO0340
NC_003888.3	RefSeq	CDS	342578	343165	.	-	0	ID=cds312;Parent=gene326;Dbxref=Genbank:NP_624664.1,GeneID:1095763;Name=NP_624664.1;Note=SCF12.19c%2C unknown%2C len: 195aa;gbkey=CDS;gene=SCF12.19c;product=hypothetical protein;protein_id=NP_624664.1;transl_table=11
NC_003888.3	RefSeq	gene	343234	345663	.	-	.	ID=gene327;Dbxref=GeneID:1095764;Name=SCF12.20c;gbkey=Gene;gene=SCF12.20c;gene_biotype=protein_coding;gene_synonym=SCF12.20c;locus_tag=SCO0341
NC_003888.3	RefSeq	CDS	343234	345663	.	-	0	ID=cds313;Parent=gene327;Dbxref=Genbank:NP_624665.1,GeneID:1095764;Name=NP_624665.1;Note=SCF12.20c%2C possible large hypothetical protein%2C len: 809 aa%3B similar to TR:CAB36703 (EMBL:AL035521) hypothetical protein from Arabidopsis thaliana (thale cress) (847 aa) fasta scores%3B opt: 903%2C z-score: 959.2%2C E(): 0%2C 38.7%25 identity in 775 aa overlap;gbkey=CDS;gene=SCF12.20c;product=large hypothetical protein;protein_id=NP_624665.1;transl_table=11
NC_003888.3	RefSeq	gene	345817	347706	.	-	.	ID=gene328;Dbxref=GeneID:1095765;Name=SCF12.21c;gbkey=Gene;gene=SCF12.21c;gene_biotype=protein_coding;gene_synonym=SCF12.21c,SCF41.01c;locus_tag=SCO0342
NC_003888.3	RefSeq	CDS	345817	347706	.	-	0	ID=cds314;Parent=gene328;Dbxref=Genbank:NP_733499.1,GeneID:1095765;Name=NP_733499.1;Note=SCF41.01c%2C partial CDS%2C possible hypothetical protein%2C len: >350 aa. Contains a possible N-terminal signal sequence.~SCF12.21c%2C partial CDS%2C unknown%2C len: >533aa;gbkey=CDS;gene=SCF12.21c;product=hypothetical protein;protein_id=NP_733499.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	347712	347716	.	-	.	ID=id328;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	347807	347810	.	+	.	ID=id329;gbkey=RBS
NC_003888.3	RefSeq	gene	347814	348083	.	+	.	ID=gene329;Dbxref=GeneID:1095766;Name=SCF41.02;gbkey=Gene;gene=SCF41.02;gene_biotype=protein_coding;gene_synonym=SCF41.02;locus_tag=SCO0343
NC_003888.3	RefSeq	CDS	347814	348083	.	+	0	ID=cds315;Parent=gene329;Dbxref=Genbank:NP_624666.1,GeneID:1095766;Name=NP_624666.1;Note=SCF41.02%2C unknown%2C len: 113 aa. Contains a PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;gbkey=CDS;gene=SCF41.02;product=hypothetical protein;protein_id=NP_624666.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	347901	347927	.	+	.	ID=id330;Dbxref=GeneID:1095766;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SCF41.02
NC_003888.3	RefSeq	gene	348137	349381	.	+	.	ID=gene330;Dbxref=GeneID:1095767;Name=SCF41.03;gbkey=Gene;gene=SCF41.03;gene_biotype=protein_coding;gene_synonym=SCF41.03;locus_tag=SCO0344
NC_003888.3	RefSeq	CDS	348137	349381	.	+	0	ID=cds316;Parent=gene330;Dbxref=Genbank:NP_624667.1,GeneID:1095767;Name=NP_624667.1;Note=SCF41.03%2C possible GntR family DNA-binding regulator%2C len: 414 aa. C-terminus similar to Streptomyces coelicolor TR:Q9ZBS9 (EMBL%3B AL034446) GntR family transcriptional regulator SC1A9.23 (273 aa)%2C fasta scores opt: 332 z-score: 363.0 E(): 7.2e-13 31.9%25 identity in 254 aa overlap. The N-terminus is weakly similar to other DNA-binding proteins e.g. Clavibacter michiganensis subsp. sepedonicus TR:O86023 (EMBL%3B AF079817) transposase (320 aa)%2C fasta scores opt: 158 z-score:0.0 E(): 0.0 30.04%25 identity in 233 aa overlap. Contains a Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family. Contains two potential helix- turn-helix motifs: between aa 135..156 score (+5.36 SD) and residues 69..90 score (+4.14 SD).;gbkey=CDS;gene=SCF41.03;product=GntR family transcriptional regulator;protein_id=NP_624667.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	348755	348931	.	+	.	ID=id331;Dbxref=GeneID:1095767;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 54.90%2C E-value 2e-15;gbkey=misc_feature;gene=SCF41.03
NC_003888.3	RefSeq	gene	349419	350201	.	-	.	ID=gene331;Dbxref=GeneID:1095768;Name=SCF41.04c;gbkey=Gene;gene=SCF41.04c;gene_biotype=protein_coding;gene_synonym=SCF41.04c;locus_tag=SCO0345
NC_003888.3	RefSeq	CDS	349419	350201	.	-	0	ID=cds317;Parent=gene331;Dbxref=Genbank:NP_624668.1,GeneID:1095768;Name=NP_624668.1;Note=SCF41.04c%2C probable IclR family regulator ( hypothetical protein)%2C len: 260 aa. Similar to many e.g. Agrobacterium tumefaciens TR:AAD43987 (EMBL:U59485) AttJ (275 aa)%2C fasta scores: opt: 354 z-score: 406.3 E(): 2.8e-15 31.6%25 identity in 237 aa overlap and Streptomyces coelicolor TR:CAB45040 (EMBL:AL078635) transcriptional regulator (248 aa)%2C fasta scores: opt: 333 z-score: 383.3 E(): 5.3e-14 32.3%25 identity in 248 aa overlap. Contains a Pfam match to entry PF01614 IclR.;gbkey=CDS;gene=SCF41.04c;product=IclR family regulatory protein;protein_id=NP_624668.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	349425	349985	.	-	.	ID=id332;Dbxref=GeneID:1095768;Note=Pfam match to entry PF01614 IclR%2C %2C score 85.60%2C E-value 1e-21;gbkey=misc_feature;gene=SCF41.04c
NC_003888.3	RefSeq	gene	350474	351352	.	+	.	ID=gene332;Dbxref=GeneID:1095769;Name=SCF41.05;gbkey=Gene;gene=SCF41.05;gene_biotype=protein_coding;gene_synonym=SCF41.05;locus_tag=SCO0346
NC_003888.3	RefSeq	CDS	350474	351352	.	+	0	ID=cds318;Parent=gene332;Dbxref=Genbank:NP_624669.1,GeneID:1095769;Name=NP_624669.1;Note=SCF41.05%2C possible 2-hydroxyhepta-2%2C4-diene-1%2C7- dioate isomerase%2C len: 292 aa. Similar to many e.g. Mycobacterium leprae TR:O33119 (EMBL%3B Z99263) possible 2-hydroxyhepta-2%2C 4-diene-1%2C7- dioate isomerase (242 aa)%2C fasta scores opt: 491 z-score: 566.1 E(): 3.5e-24 40.6%25 identity in 212 aa overlap%2C Streptomyces coelicolor TR:O86527 (EMBL%3B AL031124) hypothetical 28.2 KD protein SC1C2.27 (261 aa)%2C fasta scores opt: 465 z-score: 479.6 E(): 1.9e-21 40.0%25 identity in 220 aa overlap and to the C-terminus of Escherichia coli SW:HPCE_ECOLI (EMBL%3B X75028) homoprotocatechuate catabolism bifunctional isomerase/decarboxylase (405 aa)%2C fasta scores opt: 479 z-score: 549.1 E(): 3.1e-23 42.8%25 identity in 187 aa overlap. Contains a Pfam match to entry PF01557 FAA_hydrolase.;gbkey=CDS;gene=SCF41.05;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=NP_624669.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	350738	351241	.	+	.	ID=id333;Dbxref=GeneID:1095769;Note=Pfam match to entry PF01557 FAA_hydrolase%2C score 226.00%2C E-value 5.6e-64;gbkey=misc_feature;gene=SCF41.05
NC_003888.3	RefSeq	gene	351529	352779	.	+	.	ID=gene333;Dbxref=GeneID:1095770;Name=SCF41.06;gbkey=Gene;gene=SCF41.06;gene_biotype=protein_coding;gene_synonym=SCF41.06;locus_tag=SCO0347
NC_003888.3	RefSeq	CDS	351529	352779	.	+	0	ID=cds319;Parent=gene333;Dbxref=Genbank:NP_624670.1,GeneID:1095770;Name=NP_624670.1;Note=SCF41.06%2C possible racemase%2C len: 416 aa. Similar to Pseudomonas putida SW:MANR_PSEPU (EMBL%3B M19043) mandelate racemase (EC 5.1.2.2) (359 aa)%2C fasta scores opt: 322 z-score: 326.6 E(): 7.7e-11 27.9%25 identity in 366 aa overlap. Contains a Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family. This gene is duplicated on this cosmid and shares 74.3%25 identity%2C in 378 aa overlap%2C with the downstream gene%2C SCF41.17. Note the predicted protein product of SCF41.06 is 36 aa longer than that of SCF41.17;gbkey=CDS;gene=SCF41.06;product=racemase;protein_id=NP_624670.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	351530	352654	.	+	.	ID=id334;Dbxref=GeneID:1095770;Note=This repeat unit is 76%25 identical to the repeated region complement(15980..17108).;gbkey=repeat_region;gene=SCF41.06
NC_003888.3	RefSeq	sequence_feature	351589	352530	.	+	.	ID=id335;Dbxref=GeneID:1095770;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family%2C score 13.80%2C E-value 3.9e-09;gbkey=misc_feature;gene=SCF41.06
NC_003888.3	RefSeq	gene	352776	353795	.	+	.	ID=gene334;Dbxref=GeneID:1095771;Name=SCF41.07;gbkey=Gene;gene=SCF41.07;gene_biotype=protein_coding;gene_synonym=SCF41.07;locus_tag=SCO0348
NC_003888.3	RefSeq	CDS	352776	353795	.	+	0	ID=cds320;Parent=gene334;Dbxref=Genbank:NP_624671.1,GeneID:1095771;Name=NP_624671.1;Note=SCF41.07%2C possible 2-hydroxyacid-family dehydrogenase%2C len: 339 aa. Similar to Mycobacterium leprae SW:SERA_MYCLE (EMBL%3B Z99263) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH) MLCB637.25 (528 aa)%2C fasta scores opt: 452 z-score: 525.4 E(): 6.5e-22 36.7%25 identity in 286 aa overlap and Pyrococcus abyssi TR:CAB49675 (EMBL%3B AJ248285) SERA-like protein (307 aa)%2C fasta scores opt: 437 z-score: 511.6 E(): 3.8e-21 32.0%25 identity in 309 aa overlap. Contains a Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases;gbkey=CDS;gene=SCF41.07;product=2-hydroxyacid dehydrogenase;protein_id=NP_624671.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	353052	353660	.	+	.	ID=id336;Dbxref=GeneID:1095771;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 150.80%2C E-value 1.9e-61;gbkey=misc_feature;gene=SCF41.07
NC_003888.3	RefSeq	gene	353801	354805	.	+	.	ID=gene335;Dbxref=GeneID:1095772;Name=SCF41.08;gbkey=Gene;gene=SCF41.08;gene_biotype=protein_coding;gene_synonym=SCF41.08;locus_tag=SCO0349
NC_003888.3	RefSeq	CDS	353801	354805	.	+	0	ID=cds321;Parent=gene335;Dbxref=Genbank:NP_624672.1,GeneID:1095772;Name=NP_624672.1;Note=SCF41.08%2C possible oxidoreductase (hypothetical protein)%2C len: 334 aa. Similar to Pseudomonas sp. TR:Q52472 (EMBL%3B D32042) L-fucose dehydrogenase (329 aa)%2C fasta scores opt: 960 z-score: 1078.8 E(): 0 48.4%25 identity in 318 aa overlap;gbkey=CDS;gene=SCF41.08;product=oxidoreductase;protein_id=NP_624672.1;transl_table=11
NC_003888.3	RefSeq	gene	354802	355686	.	+	.	ID=gene336;Dbxref=GeneID:1095773;Name=SCF41.09;gbkey=Gene;gene=SCF41.09;gene_biotype=protein_coding;gene_synonym=SCF41.09;locus_tag=SCO0350
NC_003888.3	RefSeq	CDS	354802	355686	.	+	0	ID=cds322;Parent=gene336;Dbxref=Genbank:NP_624673.1,GeneID:1095773;Name=NP_624673.1;Note=SCF41.09%2C unknown%2C len: 334 aa. Similar to several hypotheticals including: Rhizobium sp. SW:Y4MH_RHISN (EMBL%3B AE000085) hypothetical 33.9 KD protein Y4MH (297 aa)%2C fasta scores opt: 262 z-score: 309.5 E(): 6.9e-10 23.8%25 identity in 303 aa overlap;gbkey=CDS;gene=SCF41.09;product=hypothetical protein;protein_id=NP_624673.1;transl_table=11
NC_003888.3	RefSeq	gene	355683	357158	.	+	.	ID=gene337;Dbxref=GeneID:1095774;Name=SCF41.10;gbkey=Gene;gene=SCF41.10;gene_biotype=protein_coding;gene_synonym=SCF41.10;locus_tag=SCO0351
NC_003888.3	RefSeq	CDS	355683	357158	.	+	0	ID=cds323;Parent=gene337;Dbxref=Genbank:NP_624674.1,GeneID:1095774;Name=NP_624674.1;Note=SCF41.10%2C unknown%2C len: 491 aa.;gbkey=CDS;gene=SCF41.10;product=hypothetical protein;protein_id=NP_624674.1;transl_table=11
NC_003888.3	RefSeq	gene	357209	358477	.	+	.	ID=gene338;Dbxref=GeneID:1095775;Name=SCF41.11;gbkey=Gene;gene=SCF41.11;gene_biotype=protein_coding;gene_synonym=SCF41.11;locus_tag=SCO0352
NC_003888.3	RefSeq	CDS	357209	358477	.	+	0	ID=cds324;Parent=gene338;Dbxref=Genbank:NP_624675.1,GeneID:1095775;Name=NP_624675.1;Note=SCF41.11 possible solute-binding protein%2C len: 422 aa. Similar to many including: Streptomyces lividans TR:Q9Z492 (EMBL%3B AF043654) BxlE precursor (434 aa)%2C fasta scores opt: 287 z-score: 311.3 E(): 5.5e-10 25.7%25 identity in 354 aa overlap. Contains a PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF41.11;product=solute-binding protein;protein_id=NP_624675.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	357257	357289	.	+	.	ID=id337;Dbxref=GeneID:1095775;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF41.11
NC_003888.3	RefSeq	gene	358481	359392	.	+	.	ID=gene339;Dbxref=GeneID:1095776;Name=SCF41.12;gbkey=Gene;gene=SCF41.12;gene_biotype=protein_coding;gene_synonym=SCF41.12;locus_tag=SCO0353
NC_003888.3	RefSeq	CDS	358481	359392	.	+	0	ID=cds325;Parent=gene339;Dbxref=Genbank:NP_624676.1,GeneID:1095776;Name=NP_624676.1;Note=SCF41.12%2C possible binding-protein-dependent transport protein%2C len: 303 aa. Similar to many including: Streptomyces coelicolor TR:CAB41203 (EMBL%3B AL049661) binding protein dependent transport protein SCE134.05c (327 aa)%2C fasta scores opt: 560 z-score: 661.2 E(): 1.8e-29 35.5%25 identity in 301 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains multiple potential membrane-spanning hydrophobic domains.;gbkey=CDS;gene=SCF41.12;product=binding protein dependent transport protein;protein_id=NP_624676.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	359033	359266	.	+	.	ID=id338;Dbxref=GeneID:1095776;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 75.90%2C E-value 8.2e-19;gbkey=misc_feature;gene=SCF41.12
NC_003888.3	RefSeq	gene	359389	360231	.	+	.	ID=gene340;Dbxref=GeneID:1095777;Name=SCF41.13;gbkey=Gene;gene=SCF41.13;gene_biotype=protein_coding;gene_synonym=SCF41.13;locus_tag=SCO0354
NC_003888.3	RefSeq	CDS	359389	360231	.	+	0	ID=cds326;Parent=gene340;Dbxref=Genbank:NP_624677.1,GeneID:1095777;Name=NP_624677.1;Note=SCF41.13%2C possible binding-protein-dependent transport protein%2C len: 280 aa%2C Similar to many e.g. Streptomyces coelicolor TR:O50501 (EMBL%3B AL009199) probable transmembrane transport protein SC7b7.04 (302 aa)%2C fasta scores opt: 584 z-score: 670.3 E(): 5.5e-30 36.1%25 identity in 274 aa overlap. Contains multiple membrane spanning hydrophobic domains%2C a PS00402 Binding-protein-dependent transport systems inner membrane comp sign and a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=CDS;gene=SCF41.13;product=binding-protein-dependent transport protein;protein_id=NP_624677.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	359875	360087	.	+	.	ID=id339;Dbxref=GeneID:1095777;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 71.80%2C E-value 1.4e-17;gbkey=misc_feature;gene=SCF41.13
NC_003888.3	RefSeq	sequence_feature	359878	359964	.	+	.	ID=id340;Dbxref=GeneID:1095777;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF41.13
NC_003888.3	RefSeq	gene	360305	360646	.	+	.	ID=gene341;Dbxref=GeneID:1095778;Name=SCF41.14;gbkey=Gene;gene=SCF41.14;gene_biotype=protein_coding;gene_synonym=SCF41.14;locus_tag=SCO0355
NC_003888.3	RefSeq	CDS	360305	360646	.	+	0	ID=cds327;Parent=gene341;Dbxref=Genbank:NP_624678.1,GeneID:1095778;Name=NP_624678.1;Note=SCF41.14%2C unknown%2C len: 113 aa. Shares a low level of similarity with Bacillus subtilis TR:O05263 (EMBL%3B Z93938) hypothetical 12.6 KD protein (104 aa)%2C fasta scores opt: 129 z-score: 179.4 E(): 0.012 31.3%25 identity in 96 aa overlap.;gbkey=CDS;gene=SCF41.14;product=hypothetical protein;protein_id=NP_624678.1;transl_table=11
NC_003888.3	RefSeq	gene	360674	361465	.	+	.	ID=gene342;Dbxref=GeneID:1095779;Name=SCF41.15;gbkey=Gene;gene=SCF41.15;gene_biotype=protein_coding;gene_synonym=SCF41.15;locus_tag=SCO0356
NC_003888.3	RefSeq	CDS	360674	361465	.	+	0	ID=cds328;Parent=gene342;Dbxref=Genbank:NP_624679.1,GeneID:1095779;Name=NP_624679.1;Note=SCF41.15%2C probable oxidoreductase%2C len: 263 aa. Shares a high level of sequence similarity with Comamonas testosteroni TR:P94681 (EMBL:U32622) toluenesulfonate zinc-independent alcohol dehydrogenase (252 aa)%2C fasta scores opt: 506 z-score: 549.4 E(): 3e-23 39.8%25 identity in 244 aa overlap and Streptomyces coelicolor TR:O88068 (EMBL:AL031541)  dehydrogenase SCI35.33C (260 aa)%2C fasta scores opt: 500 z-score: 542.8 E(): 7e-23 36.4%25 identity in 253 aa overlap. Contains a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and a PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCF41.15;product=oxidoreductase;protein_id=NP_624679.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	360716	361252	.	+	.	ID=id341;Dbxref=GeneID:1095779;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 225.30%2C E-value 8.7e-64;gbkey=misc_feature;gene=SCF41.15
NC_003888.3	RefSeq	sequence_feature	361103	361189	.	+	.	ID=id342;Dbxref=GeneID:1095779;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCF41.15
NC_003888.3	RefSeq	sequence_feature	361328	361420	.	+	.	ID=id343;Dbxref=GeneID:1095779;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 36.90%2C E-value 4.5e-07;gbkey=misc_feature;gene=SCF41.15
NC_003888.3	RefSeq	gene	361759	362478	.	-	.	ID=gene343;Dbxref=GeneID:1095780;Name=SCF41.16c;gbkey=Gene;gene=SCF41.16c;gene_biotype=protein_coding;gene_synonym=SCF41.16c;locus_tag=SCO0357
NC_003888.3	RefSeq	CDS	361759	362478	.	-	0	ID=cds329;Parent=gene343;Dbxref=Genbank:NP_624680.1,GeneID:1095780;Name=NP_624680.1;Note=SCF41.16c%2C probable GntR-family regulator ( hypothetical protein)%2C len: 270 aa. Similar to Streptomyces coelicolor TR:CAB50881 (EMBL%3B AL096844) GntR-family transcriptional regulator SCI28.07 (230 aa)%2C fasta scores opt: 292 z-score: 343.8 E(): 8.5e-12 32.7%25 identity in 220 aa overlap and Escherichia coli SW:PDHR_ECOLI (EMBL%3B V01498) pyruvate dehydrogenase complex repressor(254 aa)%2C fasta scores opt: 253 z-score: 298.6 E(): 2.8e-09 30.4%25 identity in 224 aa overlap. Contains a Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family.;gbkey=CDS;gene=SCF41.16c;product=GntR family transcriptional regulator;protein_id=NP_624680.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	362257	362436	.	-	.	ID=id344;Dbxref=GeneID:1095780;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 66.90%2C E-value 3.9e-19;gbkey=misc_feature;gene=SCF41.16c
NC_003888.3	RefSeq	gene	362635	363777	.	+	.	ID=gene344;Dbxref=GeneID:1095781;Name=SCF41.17;gbkey=Gene;gene=SCF41.17;gene_biotype=protein_coding;gene_synonym=SCF41.17;locus_tag=SCO0358
NC_003888.3	RefSeq	CDS	362635	363777	.	+	0	ID=cds330;Parent=gene344;Dbxref=Genbank:NP_624681.1,GeneID:1095781;Name=NP_624681.1;Note=SCF41.17%2C possible racemase%2C len: 380 aa. Duplication of SCF41.06. Similar to Pseudomonas putida SW:MANR_PSEPU (EMBL%3B M19043) mandelate racemase (EC 5.1.2.2) (359 aa)%2C fasta scores opt: 374 z-score: 431.2 E(): 1.2e-16 29.8%25 identity in 362 aa overlap. Contains a Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family. This gene is duplicated on this cosmid and shares 74.3%25 identity%2C in 378 aa overlap%2C with the upstream gene%2C SCF41.06;gbkey=CDS;gene=SCF41.17;product=racemase;protein_id=NP_624681.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	362636	363764	.	+	.	ID=id345;Dbxref=GeneID:1095781;Note=This repeat unit is 76%25 identical to the repeated region 4874..5998.;gbkey=repeat_region;gene=SCF41.17
NC_003888.3	RefSeq	sequence_feature	362650	363636	.	+	.	ID=id346;Dbxref=GeneID:1095781;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family%2C score 39.40%2C E-value 1.4e-10;gbkey=misc_feature;gene=SCF41.17
NC_003888.3	RefSeq	gene	363774	364496	.	+	.	ID=gene345;Dbxref=GeneID:1095782;Name=SCF41.18;gbkey=Gene;gene=SCF41.18;gene_biotype=protein_coding;gene_synonym=SCF41.18;locus_tag=SCO0359
NC_003888.3	RefSeq	CDS	363774	364496	.	+	0	ID=cds331;Parent=gene345;Dbxref=Genbank:NP_624682.1,GeneID:1095782;Name=NP_624682.1;Note=SCF41.18%2C hypothetical protein%2C len: 240 aa%3B similar to TR:Q9KEZ0 (EMBL:AP001509) Bacillus halodurans BH0709 protein%2C 242 aa%3B fasta scores: opt: 515 Z-score: 603.7 E(): 5.4e-26%3B 36.000%25 identity in 225 aa overlap;gbkey=CDS;gene=SCF41.18;product=hypothetical protein;protein_id=NP_624682.1;transl_table=11
NC_003888.3	RefSeq	gene	364559	365551	.	-	.	ID=gene346;Dbxref=GeneID:1095783;Name=SCF41.19c;gbkey=Gene;gene=SCF41.19c;gene_biotype=protein_coding;gene_synonym=SCF41.19c;locus_tag=SCO0360
NC_003888.3	RefSeq	CDS	364559	365551	.	-	0	ID=cds332;Parent=gene346;Dbxref=Genbank:NP_624683.1,GeneID:1095783;Name=NP_624683.1;Note=SCF41.19c%2C probable DNA-binding%2C LacI family%2C regulator. len: 330 aa. Similar to Escherichia coli SW:GNTR_ECOLI (EMBL:D84362) gluconate utilization system GNT-I transcriptional repressor (331 aa)%2C fasta scores opt: 674 z-score: 767.8 E(): 0 36.9%25 identity in 320 aa overlap. Contains a PS00356 Bacterial regulatory proteins%2C lacI family signature%2C a PS00237 G-protein coupled receptors signature%2C Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and a Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C LacI family. Contains a possible helix-turn-helix motif between residues 2..23 score (+5.90 SD).;gbkey=CDS;gene=SCF41.19c;product=LacI family DNA-binding transcriptional repressor;protein_id=NP_624683.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	364652	365383	.	-	.	ID=id347;Dbxref=GeneID:1095783;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 63.80%2C E-value 3.6e-15;gbkey=misc_feature;gene=SCF41.19c
NC_003888.3	RefSeq	sequence_feature	365369	365419	.	-	.	ID=id348;Dbxref=GeneID:1095783;Note=PS00237 G-protein coupled receptors signature;gbkey=misc_feature;gene=SCF41.19c
NC_003888.3	RefSeq	sequence_feature	365474	365557	.	-	.	ID=id349;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 35.10%2C E-value 2e-08;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	365489	365545	.	-	.	ID=id350;Dbxref=GeneID:1095783;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCF41.19c
NC_003888.3	RefSeq	gene	365623	366795	.	-	.	ID=gene347;Dbxref=GeneID:1095784;Name=SCF41.20c;gbkey=Gene;gene=SCF41.20c;gene_biotype=protein_coding;gene_synonym=SCF41.20c;locus_tag=SCO0361
NC_003888.3	RefSeq	CDS	365623	366795	.	-	0	ID=cds333;Parent=gene347;Dbxref=Genbank:NP_624684.1,GeneID:1095784;Name=NP_624684.1;Note=SCF41.20c%2C unknown%2C len: 390 aa. Highly similar%2C over available sequence%2C to Caulobacter crescentus TR: Q46022 (EMBL%3B X98879) xylX gene (fragment) (>140 aa)%2C fasta scores opt: 276 z-score: 326.5 E(): 7.8e-11 50.0%25 identity in 122 aa overlap.;gbkey=CDS;gene=SCF41.20c;product=hypothetical protein;protein_id=NP_624684.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	366926	366930	.	+	.	ID=id351;gbkey=RBS
NC_003888.3	RefSeq	gene	366935	368146	.	+	.	ID=gene348;Dbxref=GeneID:1095785;Name=SCF41.21;gbkey=Gene;gene=SCF41.21;gene_biotype=protein_coding;gene_synonym=SCF41.21;locus_tag=SCO0362
NC_003888.3	RefSeq	CDS	366935	368146	.	+	0	ID=cds334;Parent=gene348;Dbxref=Genbank:NP_624685.1,GeneID:1095785;Name=NP_624685.1;Note=SCF41.21%2C possible racemase%2C len: 403 aa. Weakly similar to Eukaryotic and Prokaryotic racemases e.g. Homo sapiens (Human) TR:O43673 (EMBL%3B AF047020) alpha-methylacyl-CoA racemase (EC 5.1.99.4) (382 aa)%2C fasta scores opt: 466 z-score: 544.7 E(): 5.5e-23 31.1%25 identity in 392 aa overlap and Streptomyces coelicolor TR:CAB40680 (EMBL%3B AL049587) racemase SC5F2A.13 (398 aa)%2C fasta scores opt: 508 z-score: 593.2 E(): 1.1e-25 34.5%25 identity in 383 aa overlap;gbkey=CDS;gene=SCF41.21;product=racemase;protein_id=NP_624685.1;transl_table=11
NC_003888.3	RefSeq	gene	368143	369252	.	+	.	ID=gene349;Dbxref=GeneID:1095786;Name=SCF41.22;gbkey=Gene;gene=SCF41.22;gene_biotype=protein_coding;gene_synonym=SCF41.22;locus_tag=SCO0363
NC_003888.3	RefSeq	CDS	368143	369252	.	+	0	ID=cds335;Parent=gene349;Dbxref=Genbank:NP_624686.1,GeneID:1095786;Name=NP_624686.1;Note=SCF41.22%2C possible integral membrane protein%2C len: 369 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF41.22;product=hypothetical protein;protein_id=NP_624686.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	369236	369239	.	+	.	ID=id352;Dbxref=GeneID:1095786;gbkey=RBS;gene=SCF41.22
NC_003888.3	RefSeq	gene	369249	370055	.	+	.	ID=gene350;Dbxref=GeneID:1095787;Name=SCF41.23;gbkey=Gene;gene=SCF41.23;gene_biotype=protein_coding;gene_synonym=SCF41.23;locus_tag=SCO0364
NC_003888.3	RefSeq	CDS	369249	370055	.	+	0	ID=cds336;Parent=gene350;Dbxref=Genbank:NP_624687.1,GeneID:1095787;Name=NP_624687.1;Note=SCF41.23%2C possible enoyl-CoA hydratase%2C len: 268 aa. Shares a high level of similarity with Mycobacterium tuberculosis TR:O53418 (EMBL%3B AL021897) enoyl-CoA hydratase MTV017.23C (EMBL%3B AL021897)%2C fasta scores opt: 554 z-score: 635.0 E(): 5.1e-28 40.9%25 identity in 257 aa overlap. Contains a Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family;gbkey=CDS;gene=SCF41.23;product=enoyl-CoA hydratase;protein_id=NP_624687.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	369324	369824	.	+	.	ID=id353;Dbxref=GeneID:1095787;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 166.20%2C E-value 5.6e-46;gbkey=misc_feature;gene=SCF41.23
NC_003888.3	RefSeq	gene	370066	370812	.	+	.	ID=gene351;Dbxref=GeneID:1095788;Name=SCF41.24;gbkey=Gene;gene=SCF41.24;gene_biotype=protein_coding;gene_synonym=SCF41.24;locus_tag=SCO0365
NC_003888.3	RefSeq	CDS	370066	370812	.	+	0	ID=cds337;Parent=gene351;Dbxref=Genbank:NP_624688.1,GeneID:1095788;Name=NP_624688.1;Note=SCF41.24%2C probable oxidoreductase (hypothetical protein)%2C len: 248 aa. Similar to Rhizobium sp. (strain NGR234) SW:Y4LA_RHISN (EMBL%3B AE000082) short-chain type dehydrogenase/reductase Y4LA (EC 1.-.-.-)%2C fasta scores opt: 487 z-score: 537.0 E(): 1.5e-22 38.8%25 identity in 245 aa overlap. Contains a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and a PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCF41.24;product=oxidoreductase;protein_id=NP_624688.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	370078	370632	.	+	.	ID=id354;Dbxref=GeneID:1095788;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 184.00%2C E-value 2.4e-51;gbkey=misc_feature;gene=SCF41.24
NC_003888.3	RefSeq	sequence_feature	370483	370569	.	+	.	ID=id355;Dbxref=GeneID:1095788;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCF41.24
NC_003888.3	RefSeq	sequence_feature	370696	370788	.	+	.	ID=id356;Dbxref=GeneID:1095788;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 43.80%2C E-value 3.9e-09;gbkey=misc_feature;gene=SCF41.24
NC_003888.3	RefSeq	gene	370809	371876	.	+	.	ID=gene352;Dbxref=GeneID:1095789;Name=SCF41.25;gbkey=Gene;gene=SCF41.25;gene_biotype=protein_coding;gene_synonym=SCF41.25;locus_tag=SCO0366
NC_003888.3	RefSeq	CDS	370809	371876	.	+	0	ID=cds338;Parent=gene352;Dbxref=Genbank:NP_624689.1,GeneID:1095789;Name=NP_624689.1;Note=SCF41.25%2C hypothetical protein%2C len: 355 aa%3B similar to the plasmid borne TR:Q9R6D3 (EMBL:AB016260) Agrobacterium radiobacter TIORF127 protein%2C 361 aa%3B fasta scores: opt: 520 Z-score: 612.2 E(): 1.8e-26%3B 34.295%25 identity in 312 aa overlap;gbkey=CDS;gene=SCF41.25;product=hypothetical protein;protein_id=NP_624689.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	371896	371953	.	+	.	ID=id357;gbkey=stem_loop
NC_003888.3	RefSeq	gene	371921	372478	.	-	.	ID=gene353;Dbxref=GeneID:1095790;Name=SCF41.26;gbkey=Gene;gene=SCF41.26;gene_biotype=protein_coding;gene_synonym=SCF41.26;locus_tag=SCO0367
NC_003888.3	RefSeq	CDS	371921	372478	.	-	0	ID=cds339;Parent=gene353;Dbxref=Genbank:NP_624690.1,GeneID:1095790;Name=NP_624690.1;Note=SCF41.26%2C membrane protein%2C len: 185 aa. A low level of similarity to Streptomyces coelicolor TR:O54175 (EMBL%3B AL021411) hypothetical 24.6 KD protein SC7H1.16 (257 aa)%2C fasta scores opt: 190 z-score: 226.1 E(): 3.1e-05 35.1%25 identity in 188 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCF41.26;product=hypothetical protein;protein_id=NP_624690.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	372932	374001	.	+	.	ID=id358;Note=Insertion element IS1649.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	372932	372974	.	+	.	ID=id359;Note=22/27 bp inverted repeat bounding insertion element IS1649.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	373034	373039	.	+	.	ID=id360;gbkey=RBS
NC_003888.3	RefSeq	gene	373045	374001	.	+	.	ID=gene354;Dbxref=GeneID:1095791;Name=SCF41.27;gbkey=Gene;gene=SCF41.27;gene_biotype=protein_coding;gene_synonym=SCF41.27;locus_tag=SCO0368
NC_003888.3	RefSeq	CDS	373045	374001	.	+	0	ID=cds340;Parent=gene354;Dbxref=Genbank:NP_624691.1,GeneID:1095791;Name=NP_624691.1;Note=SCF41.27%2C transposase%2C len: 318 aa. Almost identical to several Streptomyces coelicolor transposases: TR:O86758 (EMBL%3B AL031035) transposase SC6A9.26 (318 aa)%2C fasta scores opt: 2214 z-score: 2579.1 E(): 0 99.7%25 identity in 318 aa overlap and TR:CAB52905 (EMBL%3B AL109949)  insertion element transposase SCJ11.20 (318 aa)%2C fasta scores opt: 2214 z-score: 2571.8 E():0 99.7%25 identity in 318 aa overlap. Contains a possible helix-turn-helix motif between residues 26..47 scores (+3.19 SD).;gbkey=CDS;gene=SCF41.27;product=transposase;protein_id=NP_624691.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	373959	374001	.	-	.	ID=id361;Note=22/27 bp inverted repeat bounding insertion element IS1649.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	373998	377255	.	-	.	ID=gene355;Dbxref=GeneID:1095792;Name=SCF41.28c;gbkey=Gene;gene=SCF41.28c;gene_biotype=protein_coding;gene_synonym=SCF41.28c;locus_tag=SCO0369
NC_003888.3	RefSeq	CDS	373998	377255	.	-	0	ID=cds341;Parent=gene355;Dbxref=Genbank:NP_624692.1,GeneID:1095792;Name=NP_624692.1;Note=SCF41.28c%2C hypothetical protein%2C len: 1085 aa. Contains a possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCF41.28c;product=hypothetical protein;protein_id=NP_624692.1;transl_table=11
NC_003888.3	RefSeq	gene	377286	380690	.	-	.	ID=gene356;Dbxref=GeneID:1095793;Name=SCF41.29c;gbkey=Gene;gene=SCF41.29c;gene_biotype=protein_coding;gene_synonym=SCF41.29c;locus_tag=SCO0370
NC_003888.3	RefSeq	CDS	377286	380690	.	-	0	ID=cds342;Parent=gene356;Dbxref=Genbank:NP_624693.1,GeneID:1095793;Name=NP_624693.1;Note=SCF41.29c%2C possible DNA-binding protein ( hypothetical protein)%2C len: 1134 aa. Contains a possible N-terminal signal peptide sequence and a possible helix-turn-helix motif between residues 51..72 scores (+3.60 SD);gbkey=CDS;gene=SCF41.29c;product=DNA-binding protein;protein_id=NP_624693.1;transl_table=11
NC_003888.3	RefSeq	gene	380751	383360	.	-	.	ID=gene357;Dbxref=GeneID:1095794;Name=SCF41.30c;gbkey=Gene;gene=SCF41.30c;gene_biotype=protein_coding;gene_synonym=SCF41.30c;locus_tag=SCO0371
NC_003888.3	RefSeq	CDS	380751	383360	.	-	0	ID=cds343;Parent=gene357;Dbxref=Genbank:NP_624694.1,GeneID:1095794;Name=NP_624694.1;Note=SCF41.30c%2C possible hypothetical protein%2C len: 900 aa. Shares a low level of similarity%2C over the available sequence%2C with Bacteroides ovatus TR:Q45327 (EMBL%3B U15179) arabinosidase (ASDII) (fragment) (>436 aa)%2C fasta scores opt: 323 z-score: 317.9 E(): 2.4e-10 30.6%25 identity in 304 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF41.30c;product=hypothetical protein;protein_id=NP_624694.1;transl_table=11
NC_003888.3	RefSeq	gene	383578	386592	.	-	.	ID=gene358;Dbxref=GeneID:1095795;Name=SCF41.31c;gbkey=Gene;gene=SCF41.31c;gene_biotype=protein_coding;gene_synonym=SCF41.31c;locus_tag=SCO0372
NC_003888.3	RefSeq	CDS	383578	386592	.	-	0	ID=cds344;Parent=gene358;Dbxref=Genbank:NP_624695.1,GeneID:1095795;Name=NP_624695.1;Note=SCF41.31c%2C possible hypothetical protein%2C len: 1024 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF41.31c;product=hypothetical protein;protein_id=NP_624695.1;transl_table=11
NC_003888.3	RefSeq	gene	386761	387360	.	-	.	ID=gene359;Dbxref=GeneID:1095796;Name=SCF41.32c;gbkey=Gene;gene=SCF41.32c;gene_biotype=protein_coding;gene_synonym=SCF41.32c;locus_tag=SCO0373
NC_003888.3	RefSeq	CDS	386761	387360	.	-	0	ID=cds345;Parent=gene359;Dbxref=Genbank:NP_624696.1,GeneID:1095796;Name=NP_624696.1;Note=SCF41.32c%2C possible hypothetical protein%2C len: 199 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF41.32c;product=hypothetical protein;protein_id=NP_624696.1;transl_table=11
NC_003888.3	RefSeq	gene	387750	389519	.	+	.	ID=gene360;Dbxref=GeneID:1095797;Name=SCF41.33;gbkey=Gene;gene=SCF41.33;gene_biotype=protein_coding;gene_synonym=SCF41.33;locus_tag=SCO0374
NC_003888.3	RefSeq	CDS	387750	389519	.	+	0	ID=cds346;Parent=gene360;Dbxref=Genbank:NP_624697.1,GeneID:1095797;Name=NP_624697.1;Note=SCF41.33%2C ABC transporter%2C len: 589 aa. Similar to many e.g. Streptomyces coelicolor TR:Q9ZNB0 (EMBL%3B AB019513) ABC transporter (584 aa)%2C fasta scores opt: 597 z-score: 649.7 E(): 7.7e-29 30.9%25 identity in 572 aa overlap. Contains a Pfam match to entry PF00005 ABC_tran%2C ABC transporter and a PS00017 ATP/GTP-binding site motif A (P-loop). Contains membrane-spanning hydrophobic domains.;gbkey=CDS;gene=SCF41.33;product=ABC transporter;protein_id=NP_624697.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	388866	389432	.	+	.	ID=id362;Dbxref=GeneID:1095797;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 218.80%2C E-value 8.2e-62;gbkey=misc_feature;gene=SCF41.33
NC_003888.3	RefSeq	sequence_feature	388887	388910	.	+	.	ID=id363;Dbxref=GeneID:1095797;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCF41.33
NC_003888.3	RefSeq	gene	389531	391123	.	-	.	ID=gene361;Dbxref=GeneID:1095798;Name=SCF41.34c;gbkey=Gene;gene=SCF41.34c;gene_biotype=protein_coding;gene_synonym=SCF41.34c,SCF62.01c;locus_tag=SCO0375
NC_003888.3	RefSeq	CDS	389531	391123	.	-	0	ID=cds347;Parent=gene361;Dbxref=Genbank:NP_733500.1,GeneID:1095798;Name=NP_733500.1;Note=SCF62.01c%2C possible integral membrane transport protein%2C partial CDS%2C len: > 406 aa. Similar to many members of the drug resistance translocase family e.g. Staphylococcus aureus SW:QACA_STAAU (EMBL%3B X56628) antiseptic resistance protein (514 aa)%2C fasta scores opt: 750 z-score: 750.4 E():0 30.0%25 identity in 493 aa overlap%2C as well as many other Streptomyces coelicolor membrane transport proteins e.g. TR:O54186 (EMBL%3B AL021411) SC7H1.27 (533 aa)%2C fasta scores opt: 972 z-score: 970.2 E(): 0 35.0%25 identity in 543 aa overlap. Overlaps with and extends into SCF41.34c. Contains multiple possible membrane spanning hydrophobic domains and a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter.~SCF41.34c%2C possible transport protein%2C partial CDS%2C len: >157 aa. Similar to Streptomyces coelicolor transport protein TR:O54186 (EMBL%3B AL021411)  transport protein SC7H1.27 (533 aa)%2C fasta scores opt: 263 z-score: 281.1 E(): 2.6e-08 36.1%25 identity in 166 aa overlap.;gbkey=CDS;gene=SCF41.34c;product=integral membrane transport protein;protein_id=NP_733500.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	389924	391030	.	-	.	ID=id364;Dbxref=GeneID:1095798;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -87.50%2C E-value 0.00097;gbkey=misc_feature;gene=SCF41.34c
NC_003888.3	RefSeq	ribosome_entry_site	391128	391133	.	-	.	ID=id365;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	391222	391225	.	+	.	ID=id366;gbkey=RBS
NC_003888.3	RefSeq	gene	391232	391834	.	+	.	ID=gene362;Dbxref=GeneID:1095799;Name=SCF62.02;gbkey=Gene;gene=SCF62.02;gene_biotype=protein_coding;gene_synonym=SCF62.02;locus_tag=SCO0376
NC_003888.3	RefSeq	CDS	391232	391834	.	+	0	ID=cds348;Parent=gene362;Dbxref=Genbank:NP_624698.1,GeneID:1095799;Name=NP_624698.1;Note=SCF62.02%2C possible transcriptional regulator%2C len: 200 aa. Similar to several proteins of undefined function from Streptomyces sp. e.g. Streptomyces coelicolor TR:CAB51134 (EMBL%3B Y18817) hypothetical 20.6 KD protein (190 aa)%2C fasta scores opt: 352 z-score: 424.9 E(): 2.6e-16 37.0%25 identity in 189 aa overlap. Contains a Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix between residues 29..50 (+5.17 SD).;gbkey=CDS;gene=SCF62.02;product=transcriptional regulator;protein_id=NP_624698.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	391286	391450	.	+	.	ID=id367;Dbxref=GeneID:1095799;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 64.30%2C E-value 2.5e-15;gbkey=misc_feature;gene=SCF62.02
NC_003888.3	RefSeq	gene	391950	392483	.	-	.	ID=gene363;Dbxref=GeneID:1095800;Name=SCF62.03c;gbkey=Gene;gene=SCF62.03c;gene_biotype=protein_coding;gene_synonym=SCF62.03c;locus_tag=SCO0377
NC_003888.3	RefSeq	CDS	391950	392483	.	-	0	ID=cds349;Parent=gene363;Dbxref=Genbank:NP_624699.1,GeneID:1095800;Name=NP_624699.1;Note=SCF62.03c%2C possible integral membrane protein%2C len: 177 aa. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF62.03c;product=hypothetical protein;protein_id=NP_624699.1;transl_table=11
NC_003888.3	RefSeq	gene	392484	393218	.	-	.	ID=gene364;Dbxref=GeneID:1095801;Name=SCF62.04c;gbkey=Gene;gene=SCF62.04c;gene_biotype=protein_coding;gene_synonym=SCF62.04c;locus_tag=SCO0378
NC_003888.3	RefSeq	CDS	392484	393218	.	-	0	ID=cds350;Parent=gene364;Dbxref=Genbank:NP_624700.1,GeneID:1095801;Name=NP_624700.1;Note=SCF62.04c%2C possible hypothetical protein%2C len: 244 aa. Highly similar to Streptomyces coelicolor TR:CAB52958 (EMBL%3B AL109950) hypothetical 25.2 KD protein SCJ4.24C (242 aa)%2C fasta scores opt: 1283 z-score: 1457.6 E(): 0 83.1%25 identity in 242 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF62.04c;product=hypothetical protein;protein_id=NP_624700.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	393227	393231	.	-	.	ID=id368;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	393487	393491	.	+	.	ID=id369;gbkey=RBS
NC_003888.3	RefSeq	gene	393498	394961	.	+	.	ID=gene365;Dbxref=GeneID:1095802;Name=katA;gbkey=Gene;gene=katA;gene_biotype=protein_coding;gene_synonym=katA;locus_tag=SCO0379
NC_003888.3	RefSeq	CDS	393498	394961	.	+	0	ID=cds351;Parent=gene365;Dbxref=Genbank:NP_624701.1,GeneID:1095802;Name=NP_624701.1;Note=SCF62.05%2C katA%2C catalase (EC 1.11.1.6) len: 487 aa. Has been previously sequenced and characterised from Streptomyces coelicolor strain ATCC10147 TR:P77948 (EMBL%3B X96981) catalase (EC 1.11.1.6) (488 aa)%2C fasta scores opt: 3300 z-score: 3768.6 E():0 98.2%25 identity in 488 aa overlap. Also similar to another proposed Streptomyces coelicolor catalase (EC 1.11.1.6) TR:Q9Z598 (EMBL%3B AL035478) SC2G5.25C (487 aa)%2C fasta scores opt: 1704 z-score: 1896.1 E():0 53.8%25 identity in 483 aa overlap. Contains Prosite hits to PS00437 Catalase proximal heme-ligand signature and to PS00438 Catalase proximal active site signature. Also contains a Pfam match to entry PF00199 catalase%2C Catalase.;gbkey=CDS;gene=katA;product=catalase;protein_id=NP_624701.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	393525	394937	.	+	.	ID=id370;Dbxref=GeneID:1095802;Note=Pfam match to entry PF00199 catalase%2C Catalase%2C score 1129.70%2C E-value 0;gbkey=misc_feature;gene=katA
NC_003888.3	RefSeq	sequence_feature	393633	393683	.	+	.	ID=id371;Dbxref=GeneID:1095802;Note=PS00438 Catalase proximal active site signature;gbkey=misc_feature;gene=katA
NC_003888.3	RefSeq	sequence_feature	394503	394529	.	+	.	ID=id372;Dbxref=GeneID:1095802;Note=PS00437 Catalase proximal heme-ligand signature;gbkey=misc_feature;gene=katA
NC_003888.3	RefSeq	stem_loop	394997	395039	.	+	.	ID=id373;Note=Inverted repeat 21/21 (100%25) with 1 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	395052	395055	.	+	.	ID=id374;gbkey=RBS
NC_003888.3	RefSeq	gene	395065	395460	.	+	.	ID=gene366;Dbxref=GeneID:1095803;Name=SCF62.06;gbkey=Gene;gene=SCF62.06;gene_biotype=protein_coding;gene_synonym=SCF62.06;locus_tag=SCO0380
NC_003888.3	RefSeq	CDS	395065	395460	.	+	0	ID=cds352;Parent=gene366;Dbxref=Genbank:NP_624702.1,GeneID:1095803;Name=NP_624702.1;Note=SCF62.06%2C unknown%2C len: 131 aa. Weakly similar to several Prokaryotic Ank-like proteins e.g. Pseudomonas syringae TR:P95546 (EMBL%3B AF001355) AnkF precursor (183 aa)%2C fasta scores opt: 255 z-score: 318.0 E(): 2.3e-10 38.4%25 identity in 125 aa overlap. Contains 2x Pfam match to entry PF00023 ank%2C Ank repeat.;gbkey=CDS;gene=SCF62.06;product=hypothetical protein;protein_id=NP_624702.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	395209	395307	.	+	.	ID=id375;Dbxref=GeneID:1095803;Note=Pfam match to entry PF00023 ank%2C Ank repeat%2C score 38.10%2C E-value 2e-07;gbkey=misc_feature;gene=SCF62.06
NC_003888.3	RefSeq	sequence_feature	395308	395406	.	+	.	ID=id376;Dbxref=GeneID:1095803;Note=Pfam match to entry PF00023 ank%2C Ank repeat%2C score 6.10%2C E-value 13;gbkey=misc_feature;gene=SCF62.06
NC_003888.3	RefSeq	gene	395939	397414	.	+	.	ID=gene367;Dbxref=GeneID:1095804;Name=SCF62.07;gbkey=Gene;gene=SCF62.07;gene_biotype=protein_coding;gene_synonym=SCF62.07;locus_tag=SCO0381
NC_003888.3	RefSeq	CDS	395939	397414	.	+	0	ID=cds353;Parent=gene367;Dbxref=Genbank:NP_624703.1,GeneID:1095804;Name=NP_624703.1;gbkey=CDS;gene=SCF62.07;product=glycosyl transferase;protein_id=NP_624703.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	397472	397476	.	+	.	ID=id377;gbkey=RBS
NC_003888.3	RefSeq	gene	397485	398810	.	+	.	ID=gene368;Dbxref=GeneID:1095805;Name=SCF62.08;gbkey=Gene;gene=SCF62.08;gene_biotype=protein_coding;gene_synonym=SCF62.08;locus_tag=SCO0382
NC_003888.3	RefSeq	CDS	397485	398810	.	+	0	ID=cds354;Parent=gene368;Dbxref=Genbank:NP_624704.1,GeneID:1095805;Name=NP_624704.1;Note=SCF62.08%2C probable UDP-glucose/GDP-mannose dehydrogenase (hypothetical protein)%2C len: 441 aa. Highly similar to many e.g. Pseudomonas syringae (pv. phaseolicola) SW: ALGD_PSESH (EMBL%3B AF001555) GDP-mannose 6-dehydrogenase (EC 1.1.1.132) (438 aa)%2C fasta scores opt: 1453 z-score: 1666.9 E(): 0 49.2%25 identity in 445 aa overlap. Contains a Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family.;gbkey=CDS;gene=SCF62.08;product=UDP-glucose/GDP-mannose dehydrogenase;protein_id=NP_624704.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	397485	398747	.	+	.	ID=id378;Dbxref=GeneID:1095805;Note=Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family%2C score 401.50%2C E-value 8.1e-117;gbkey=misc_feature;gene=SCF62.08
NC_003888.3	RefSeq	gene	398881	400104	.	+	.	ID=gene369;Dbxref=GeneID:1095806;Name=SCF62.09;gbkey=Gene;gene=SCF62.09;gene_biotype=protein_coding;gene_synonym=SCF62.09;locus_tag=SCO0383
NC_003888.3	RefSeq	CDS	398881	400104	.	+	0	ID=cds355;Parent=gene369;Dbxref=Genbank:NP_624705.1,GeneID:1095806;Name=NP_624705.1;Note=SCF62.09%2C unknown%2C len: 407 aa. Weakly similar to a number of glycosyl transferases e.g. Streptomyces coelicolor TR:CAB39859 (EMBL%3B AL049497) glycosyl transferase SC6G10.05C (412 aa)%2C fasta scores opt: 236 z-score: 280.6 E(): 2.8e-08 26.4%25 identity in 386 aa overlap and Escherichia coli TR:Q47594 (EMBL%3B D43637) mannosyltransferase B (381 aa)%2C fasta scores opt: 187 z-score: 223.4 E(): 4.3e-05 23.3%25 identity in 288 aa overlap. Contains a TTA leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SCF62.09;product=hypothetical protein;protein_id=NP_624705.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	399910	399912	.	+	.	ID=id379;Dbxref=GeneID:1095806;Note=TTA/leucine codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCF62.09
NC_003888.3	RefSeq	gene	400179	401468	.	+	.	ID=gene370;Dbxref=GeneID:1095807;Name=SCF62.10;gbkey=Gene;gene=SCF62.10;gene_biotype=protein_coding;gene_synonym=SCF62.10;locus_tag=SCO0384
NC_003888.3	RefSeq	CDS	400179	401468	.	+	0	ID=cds356;Parent=gene370;Dbxref=Genbank:NP_624706.1,GeneID:1095807;Name=NP_624706.1;Note=SCF62.10%2C possible membrane protein%2C len: 429 aa. Contains a possible membrane spanning hydrophobic domain and a probable coiled-coil from 146 to 176 (31 residues).;gbkey=CDS;gene=SCF62.10;product=hypothetical protein;protein_id=NP_624706.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	401453	401460	.	+	.	ID=id380;Dbxref=GeneID:1095807;gbkey=RBS;gene=SCF62.10
NC_003888.3	RefSeq	gene	401465	403030	.	+	.	ID=gene371;Dbxref=GeneID:1095808;Name=SCF62.11;gbkey=Gene;gene=SCF62.11;gene_biotype=protein_coding;gene_synonym=SCF62.11;locus_tag=SCO0385
NC_003888.3	RefSeq	CDS	401465	403030	.	+	0	ID=cds357;Parent=gene371;Dbxref=Genbank:NP_624707.1,GeneID:1095808;Name=NP_624707.1;Note=SCF62.11%2C possible membrane protein%2C len: 521 aa. Contains possible membrane spanning hydrophobic domains and two possible coiled-coils from 144 to 182 (39 residues) and from 190 to 221 (32 residues).;gbkey=CDS;gene=SCF62.11;product=hypothetical protein;protein_id=NP_624707.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	403017	403022	.	+	.	ID=id381;Dbxref=GeneID:1095808;gbkey=RBS;gene=SCF62.11
NC_003888.3	RefSeq	gene	403034	404968	.	+	.	ID=gene372;Dbxref=GeneID:1095809;Name=SCF62.12;gbkey=Gene;gene=SCF62.12;gene_biotype=protein_coding;gene_synonym=SCF62.12;locus_tag=SCO0386
NC_003888.3	RefSeq	CDS	403034	404968	.	+	0	ID=cds358;Parent=gene372;Dbxref=Genbank:NP_624708.1,GeneID:1095809;Name=NP_624708.1;Note=SCF62.12%2C asparagine synthetase%2C len: 644 aa. Highly similar to many e.g. Mycobacterium tuberculosis SW:ASNH_MYCTU (EMBL%3B Z70283) asparagine synthetase (glutamine-hydrolysing) (EC 6.3.5.4) (652 aa)%2C fasta scores opt: 752 z-score: 874.8 E():0 32.8%25 identity in 655 aa overlap. Contains a Pfam match to entry PF00310 GATase_2%2C Glutamine amidotransferases class-II.;gbkey=CDS;gene=SCF62.12;product=asparagine synthetase;protein_id=NP_624708.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	403037	403480	.	+	.	ID=id382;Dbxref=GeneID:1095809;Note=Pfam match to entry PF00310 GATase_2%2C Glutamine amidotransferases class-II%2C score 87.90%2C E-value 2.4e-29;gbkey=misc_feature;gene=SCF62.12
NC_003888.3	RefSeq	ribosome_entry_site	405048	405051	.	+	.	ID=id383;gbkey=RBS
NC_003888.3	RefSeq	gene	405070	407250	.	+	.	ID=gene373;Dbxref=GeneID:1095810;Name=SCF62.13;gbkey=Gene;gene=SCF62.13;gene_biotype=protein_coding;gene_synonym=SCF62.13;locus_tag=SCO0387
NC_003888.3	RefSeq	CDS	405070	407250	.	+	0	ID=cds359;Parent=gene373;Dbxref=Genbank:NP_624709.1,GeneID:1095810;Name=NP_624709.1;Note=SCF62.13. possible bi-domain oxidoreductase%2C len: 726 aa. The N-terminus is similar to many Zinc-binding dehydrogenases e.g. Sinorhizobium meliloti TR:O31186 (EMBL%3B AF031940) alcohol dehydrogenase (340 aa)%2C fasta scores pt: 224 z-score: 241.8 E(): 4.1e-06 25.5%25 identity in 333 aa overlap. The C-terminus is similar to other oxidoreductases e.g. Zymomonas mobilis SW:GFO_ZYMMO (EMBL%3B M97379) glucose-fructose oxidoreductase precursor (EC 1.1.99.28) (439 aa)%2C fasta scores opt: 243 z-score: 260.3 E(): 3.8e-07 26.1%25 identity in 272 aa overlap. Note this CDS is also weakly similar to the C-terminus of the Eukaryotic: Cochliobolus heterostrophus TR:Q92217 (EMBL%3B U68040) polyketide synthase (2530 aa)%2C fasta scores opt: 164 z-score:0.0 E(): 0.0 25.52%25 identity in 576 aa overlap. Contains a Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and a Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family. Also contains possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCF62.13;product=bi-domain-containing oxidoreductase;protein_id=NP_624709.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	405076	406167	.	+	.	ID=id384;Dbxref=GeneID:1095810;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score -34.50%2C E-value 6.5e-08;gbkey=misc_feature;gene=SCF62.13
NC_003888.3	RefSeq	sequence_feature	406282	406995	.	+	.	ID=id385;Dbxref=GeneID:1095810;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 121.00%2C E-value 2.2e-32;gbkey=misc_feature;gene=SCF62.13
NC_003888.3	RefSeq	ribosome_entry_site	407238	407242	.	+	.	ID=id386;Dbxref=GeneID:1095810;gbkey=RBS;gene=SCF62.13
NC_003888.3	RefSeq	gene	407253	409214	.	+	.	ID=gene374;Dbxref=GeneID:1095811;Name=SCF62.14;gbkey=Gene;gene=SCF62.14;gene_biotype=protein_coding;gene_synonym=SCF62.14;locus_tag=SCO0388
NC_003888.3	RefSeq	CDS	407253	409214	.	+	0	ID=cds360;Parent=gene374;Dbxref=Genbank:NP_624710.1,GeneID:1095811;Name=NP_624710.1;Note=SCF62.14%2C unknown%2C len: 653 aa. Weakly similar to Cytophaga heparina TR: Q59289 (EMBL%3B U27586) heparinase III protein precursor (EC 4.2.2.8) (659 aa)%2C fasta scores opt: 202 z-score: 229.2 E(): 2.1e-05 22.8%25 identity in 421 aa overlap.;gbkey=CDS;gene=SCF62.14;product=hypothetical protein;protein_id=NP_624710.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	409221	409227	.	+	.	ID=id387;gbkey=RBS
NC_003888.3	RefSeq	gene	409237	410772	.	+	.	ID=gene375;Dbxref=GeneID:1095812;Name=SCF62.15;gbkey=Gene;gene=SCF62.15;gene_biotype=protein_coding;gene_synonym=SCF62.15;locus_tag=SCO0389
NC_003888.3	RefSeq	CDS	409237	410772	.	+	0	ID=cds361;Parent=gene375;Dbxref=Genbank:NP_624711.1,GeneID:1095812;Name=NP_624711.1;Note=SCF62.15%2C possible lipoprotein%2C len: 511 aa. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCF62.15;product=lipoprotein;protein_id=NP_624711.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	409279	409311	.	+	.	ID=id388;Dbxref=GeneID:1095812;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF62.15
NC_003888.3	RefSeq	gene	410774	412006	.	+	.	ID=gene376;Dbxref=GeneID:1095813;Name=SCF62.16;gbkey=Gene;gene=SCF62.16;gene_biotype=protein_coding;gene_synonym=SCF62.16;locus_tag=SCO0390
NC_003888.3	RefSeq	CDS	410774	412006	.	+	0	ID=cds362;Parent=gene376;Dbxref=Genbank:NP_624712.1,GeneID:1095813;Name=NP_624712.1;Note=SCF62.16%2C possible membrane protein%2C len: 410 aa. Contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF62.16;product=hypothetical protein;protein_id=NP_624712.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	411994	412001	.	+	.	ID=id389;Dbxref=GeneID:1095813;gbkey=RBS;gene=SCF62.16
NC_003888.3	RefSeq	gene	412009	413250	.	+	.	ID=gene377;Dbxref=GeneID:1095814;Name=SCF62.17;gbkey=Gene;gene=SCF62.17;gene_biotype=protein_coding;gene_synonym=SCF62.17;locus_tag=SCO0391
NC_003888.3	RefSeq	CDS	412009	413250	.	+	0	ID=cds363;Parent=gene377;Dbxref=Genbank:NP_624713.1,GeneID:1095814;Name=NP_624713.1;Note=SCF62.17%2C possible transferase%2C len: 413 aa. Similar to many including Streptomyces coelicolor TR:Q9Z5B7 (EMBL:AL035478)  transferase SC2G5.06 (406 aa)%2C fasta scores opt: 263 z-score: 301.1 E(): 2.1e-09 31.9%25 identity in 385 aa overlap and Erwinia amylovora SW:AMSK_ERWAM (EMBL:X77921) amylovoran biosynthesis protein AmsK (407 aa)%2C fasta scores opt: 224 z-score: 257.0 E(): 5.8e-07 28.4%25 identity in 232 aa overlap. Contains a Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1;gbkey=CDS;gene=SCF62.17;product=transferase;protein_id=NP_624713.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	412657	413115	.	+	.	ID=id390;Dbxref=GeneID:1095814;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 71.40%2C E-value 2.6e-19;gbkey=misc_feature;gene=SCF62.17
NC_003888.3	RefSeq	gene	413247	414497	.	+	.	ID=gene378;Dbxref=GeneID:1095815;Name=SCF62.18;gbkey=Gene;gene=SCF62.18;gene_biotype=protein_coding;gene_synonym=SCF62.18;locus_tag=SCO0392
NC_003888.3	RefSeq	CDS	413247	414497	.	+	0	ID=cds364;Parent=gene378;Dbxref=Genbank:NP_624714.1,GeneID:1095815;Name=NP_624714.1;Note=SCF62.18%2C possible methyltransferase%2C len: 416 aa. Similar to several including: Streptomyces peucetius TR:O68501 (EMBL%3B AF048833) daunorubicin/doxorubicin biosynthesis enzyme DnrX (403 aa)%2C fasta scores opt: 801 z-score: 923.6 E(): 0%3B 36.7%25 identity in 403 aa overlap and Streptomyces fradiae TR:AAD41823 (EMBL:AF147704) NDP-hexose 3-C-methyltransferase TYLCIII (418 aa)%2C fasta scores opt: 688 z-score: 793.6 E(): 0%3B 34.1%25 identity in 425 aa overlap;gbkey=CDS;gene=SCF62.18;product=methyltransferase;protein_id=NP_624714.1;transl_table=11
NC_003888.3	RefSeq	gene	414494	415303	.	+	.	ID=gene379;Dbxref=GeneID:1095816;Name=SCF62.19;gbkey=Gene;gene=SCF62.19;gene_biotype=protein_coding;gene_synonym=SCF62.19;locus_tag=SCO0393
NC_003888.3	RefSeq	CDS	414494	415303	.	+	0	ID=cds365;Parent=gene379;Dbxref=Genbank:NP_624715.1,GeneID:1095816;Name=NP_624715.1;Note=SCF62.19%2C possible transferase%2C len: 269 aa. Similar to many transferases e.g. Streptomyces glaucescens TR:Q54266 (EMBL:X82177) alpha-D-glucose-1-phosphate cytidylyl-transferase StrQ (fragment) (299 aa)%2C fasta scores opt: 554 z-score: 687.3 E(): 6.3e-31 35.0%25 identity in 280 aa overlap.;gbkey=CDS;gene=SCF62.19;product=transferase;protein_id=NP_624715.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	415291	415294	.	+	.	ID=id391;Dbxref=GeneID:1095816;gbkey=RBS;gene=SCF62.19
NC_003888.3	RefSeq	gene	415300	415947	.	+	.	ID=gene380;Dbxref=GeneID:1095817;Name=SCF62.20;gbkey=Gene;gene=SCF62.20;gene_biotype=protein_coding;gene_synonym=SCF62.20;locus_tag=SCO0394
NC_003888.3	RefSeq	CDS	415300	415947	.	+	0	ID=cds366;Parent=gene380;Dbxref=Genbank:NP_624716.1,GeneID:1095817;Name=NP_624716.1;Note=SCF62.20%2C unknown%2C len: 215 aa;gbkey=CDS;gene=SCF62.20;product=hypothetical protein;protein_id=NP_624716.1;transl_table=11
NC_003888.3	RefSeq	gene	415951	416976	.	+	.	ID=gene381;Dbxref=GeneID:1095818;Name=SCF62.21;gbkey=Gene;gene=SCF62.21;gene_biotype=protein_coding;gene_synonym=SCF62.21;locus_tag=SCO0395
NC_003888.3	RefSeq	CDS	415951	416976	.	+	0	ID=cds367;Parent=gene381;Dbxref=Genbank:NP_624717.1,GeneID:1095818;Name=NP_624717.1;Note=SCF62.21%2C possible epimerase/dehydratase%2C len: 314 aa. Highly similar to Streptomyces glaucescens TR:Q54262 (EMBL:X78974)  protein involved in biosynthesis of 5'-hydroxystreptomycin StrP (358 aa)%2C fasta scores opt: 1446 z-score: 1656.6 E(): 0 68.4%25 identity in 342 aa overlap. Also similar to Streptomyces griseus SW:STRE_STRGR (EMBL:X62567) DTDP-glucose 4%2C6-dehydratase (EC 4.2.1.46) (328 aa)%2C fasta scores opt: 260 z-score: 303.2 E(): 1.6e-09 28.4%25 identity in 317 aa overlap. Contains a Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family;gbkey=CDS;gene=SCF62.21;product=epimerase/dehydratase;protein_id=NP_624717.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	415957	416874	.	+	.	ID=id392;Dbxref=GeneID:1095818;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 2.10%2C E-value 2.2e-12;gbkey=misc_feature;gene=SCF62.21
NC_003888.3	RefSeq	gene	416973	418247	.	+	.	ID=gene382;Dbxref=GeneID:1095819;Name=SCF62.22;gbkey=Gene;gene=SCF62.22;gene_biotype=protein_coding;gene_synonym=SCF62.22;locus_tag=SCO0396
NC_003888.3	RefSeq	CDS	416973	418247	.	+	0	ID=cds368;Parent=gene382;Dbxref=Genbank:NP_624718.1,GeneID:1095819;Name=NP_624718.1;Note=SCF62.22%2C unknown%2C len: 424 aa;gbkey=CDS;gene=SCF62.22;product=hypothetical protein;protein_id=NP_624718.1;transl_table=11
NC_003888.3	RefSeq	gene	418253	419542	.	+	.	ID=gene383;Dbxref=GeneID:1095820;Name=SCF62.23;gbkey=Gene;gene=SCF62.23;gene_biotype=protein_coding;gene_synonym=SCF62.23;locus_tag=SCO0397
NC_003888.3	RefSeq	CDS	418253	419542	.	+	0	ID=cds369;Parent=gene383;Dbxref=Genbank:NP_624719.1,GeneID:1095820;Name=NP_624719.1;Note=SCF62.23%2C possible integral membrane protein%2C len:429 aa. Weakly similar to several proteins of undefined function e.g. Synechocystis sp. (strain PCC 6803) TR:P72591 (EMBL%3B D90899) iron(III) dicitrate transport system permease FecD (349 aa)%2C fasta scores opt: 154 z-score: 170.4 E(): 0.039 25.4%25 identity in 334 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF62.23;product=hypothetical protein;protein_id=NP_624719.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	419531	419534	.	+	.	ID=id393;Dbxref=GeneID:1095820;gbkey=RBS;gene=SCF62.23
NC_003888.3	RefSeq	gene	419539	420486	.	+	.	ID=gene384;Dbxref=GeneID:1095821;Name=SCF62.24;gbkey=Gene;gene=SCF62.24;gene_biotype=protein_coding;gene_synonym=SCF62.24;locus_tag=SCO0398
NC_003888.3	RefSeq	CDS	419539	420486	.	+	0	ID=cds370;Parent=gene384;Dbxref=Genbank:NP_624720.1,GeneID:1095821;Name=NP_624720.1;Note=SCF62.24%2C possible glycosyl transferase%2C len: 315 aa. Similar to several e.g. Rickettsia prowazekii TR:Q9ZD96 (EMBL:AJ235271) glycosyl transferase (280 aa)%2C fasta scores opt: 272 z-score: 326.2 E(): 8.1e-11 29.9%25 identity in 214 aa overlap and Neisseria gonorrhoeae TR:Q50949 (EMBL:U14554) glycosyl transferase (337 aa)%2C fasta scores opt: 234 z-score: 280.4 E(): 2.9e-08 27.8%25 identity in 248 aa overlap. Contains a Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=SCF62.24;product=glycosyl transferase;protein_id=NP_624720.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	419560	420084	.	+	.	ID=id394;Dbxref=GeneID:1095821;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 57.20%2C E-value 3.5e-13;gbkey=misc_feature;gene=SCF62.24
NC_003888.3	RefSeq	gene	420492	421715	.	+	.	ID=gene385;Dbxref=GeneID:1095822;Name=SCF62.25;gbkey=Gene;gene=SCF62.25;gene_biotype=protein_coding;gene_synonym=SCF62.25;locus_tag=SCO0399
NC_003888.3	RefSeq	CDS	420492	421715	.	+	0	ID=cds371;Parent=gene385;Dbxref=Genbank:NP_624721.1,GeneID:1095822;Name=NP_624721.1;Note=SCF62.25%2C possible membrane protein%2C len: 407 aa. Weakly similar to a several e.g. Erwinia amylovora SW: AMSJ_ERWAM (EMBL%3B X77921) amylovoran biosynthesis protein AmsJ (415 aa)%2C fasta scores opt: 107 z-score: 129.1 E(): 7.8 21.3%25 identity in 423 aa overlap and Escherichia coli SW:WCAK_ECOLI (EMBL%3B U38473) colanic acid biosynthesis protein WcaK (426 aa)%2C fasta scores opt: 111 z-score: 133.6 E():4.3 20.1%25 identity in 398 aa overlap. Contains a possible N-terminal signal sequence and a membrane spanning hydrophobic domain. Also contains a TTA leucine codon%2C possible target for bldA regulation and a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCF62.25;product=hypothetical protein;protein_id=NP_624721.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	420507	420509	.	+	.	ID=id395;Dbxref=GeneID:1095822;Note=TTA/leucine codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCF62.25
NC_003888.3	RefSeq	sequence_feature	421455	421478	.	+	.	ID=id396;Dbxref=GeneID:1095822;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF62.25
NC_003888.3	RefSeq	ribosome_entry_site	421703	421707	.	+	.	ID=id397;Dbxref=GeneID:1095822;gbkey=RBS;gene=SCF62.25
NC_003888.3	RefSeq	gene	421712	422263	.	+	.	ID=gene386;Dbxref=GeneID:1095823;Name=SCF62.26;gbkey=Gene;gene=SCF62.26;gene_biotype=protein_coding;gene_synonym=SCF62.26;locus_tag=SCO0400
NC_003888.3	RefSeq	CDS	421712	422263	.	+	0	ID=cds372;Parent=gene386;Dbxref=Genbank:NP_624722.1,GeneID:1095823;Name=NP_624722.1;Note=SCF62.26%2C possible epimerase%2C len: 178 aa. Similar to many including: Streptomyces griseus SW:STRM_STRGR (EMBL%3B X62567) dTDP-4-dehydrorhamnose 3%2C5-epimerase (EC 5.1.3.13) (DTDP-4-keto-6-deoxyglucose 3%2C5-epimerase) (DTDP-l-rhamnose synthetase) (200 aa)%2C fasta scores opt: 340 z-score:0.0 E(): 0.0 37.78%25 identity in 180 aa overlap and Leptospira borgpetersenii TR:Q9ZGK0 (EMBL%3B AF078135) RmlC (186 aa)%2C fasta scores pt: 432 z-score: 524.9 E(): 7.2e-22 42.3%25 identity in 175 aa overlap. Contains a Pfam match to entry PF00908 dTDP_sugar_isom%2C dTDP-4-dehydrorhamnose 3%2C5-epimerase.;gbkey=CDS;gene=SCF62.26;product=epimerase;protein_id=NP_624722.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	421733	422242	.	+	.	ID=id398;Dbxref=GeneID:1095823;Note=Pfam match to entry PF00908 dTDP_sugar_isom%2C dTDP-4-dehydrorhamnose 3%2C5-epimerase%2C score 207.70%2C E-value 1.8e-58;gbkey=misc_feature;gene=SCF62.26
NC_003888.3	RefSeq	ribosome_entry_site	422254	422258	.	+	.	ID=id399;Dbxref=GeneID:1095823;gbkey=RBS;gene=SCF62.26
NC_003888.3	RefSeq	gene	422271	423596	.	+	.	ID=gene387;Dbxref=GeneID:1095824;Name=SCF62.27;gbkey=Gene;gene=SCF62.27;gene_biotype=protein_coding;gene_synonym=SCF62.27;locus_tag=SCO0401
NC_003888.3	RefSeq	CDS	422271	423596	.	+	0	ID=cds373;Parent=gene387;Dbxref=Genbank:NP_624723.1,GeneID:1095824;Name=NP_624723.1;Note=catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate;gbkey=CDS;gene=SCF62.27;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=NP_624723.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	422355	422369	.	+	.	ID=id400;Dbxref=GeneID:1095824;gbkey=RBS;gene=SCF62.27
NC_003888.3	RefSeq	sequence_feature	422415	422714	.	+	.	ID=id401;Dbxref=GeneID:1095824;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 61.30%2C E-value 9.5e-21;gbkey=misc_feature;gene=SCF62.27
NC_003888.3	RefSeq	sequence_feature	422808	423290	.	+	.	ID=id402;Dbxref=GeneID:1095824;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 80.10%2C E-value 2.8e-27;gbkey=misc_feature;gene=SCF62.27
NC_003888.3	RefSeq	gene	423654	424406	.	-	.	ID=gene388;Dbxref=GeneID:1095825;Name=SCF51.01c;gbkey=Gene;gene=SCF51.01c;gene_biotype=protein_coding;gene_synonym=SCF51.01c,SCF62.28c;locus_tag=SCO0402
NC_003888.3	RefSeq	CDS	423654	424406	.	-	0	ID=cds374;Parent=gene388;Dbxref=Genbank:NP_733501.1,GeneID:1095825;Name=NP_733501.1;Note=SCF51.01c%2C unknown%2C len: >48 aa~SCF62.28c%2C possible integral membrane protein%2C partial CDS%2C len: >248 aa. Weakly similar in parts to Streptomyces coelicolor TR:O86624 (EMBL: AL031155) integral membrane protein SC3A7.23C (272 aa)%2C fasta scores opt: 189 z-score: 228.1 E(): 2.5e-05 31.6%25 identity in 190 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF51.01c;product=hypothetical protein;protein_id=NP_733501.1;transl_table=11
NC_003888.3	RefSeq	gene	424609	425226	.	-	.	ID=gene389;Dbxref=GeneID:1095826;Name=SCF51.02c;gbkey=Gene;gene=SCF51.02c;gene_biotype=protein_coding;gene_synonym=SCF51.02c;locus_tag=SCO0403
NC_003888.3	RefSeq	CDS	424609	425226	.	-	0	ID=cds375;Parent=gene389;Dbxref=Genbank:NP_624724.1,GeneID:1095826;Name=NP_624724.1;Note=SCF51.02c%2C hypothetical protein%2C len: 187 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB56690 (EMBL:AL121596) Streptomyces coelicolor SCF51A.38 hypothetical 18.5 KD protein%2C 169 aa%3B fasta scores: opt: 176 z-score: 225.6 E(): 3.4e-05%3B 32.9%25 identity in 173 aa overlap;gbkey=CDS;gene=SCF51.02c;product=hypothetical protein;protein_id=NP_624724.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	425232	425235	.	+	.	ID=id403;gbkey=RBS
NC_003888.3	RefSeq	gene	425243	425983	.	+	.	ID=gene390;Dbxref=GeneID:1095827;Name=SCF51.03;gbkey=Gene;gene=SCF51.03;gene_biotype=protein_coding;gene_synonym=SCF51.03;locus_tag=SCO0404
NC_003888.3	RefSeq	CDS	425243	425983	.	+	0	ID=cds376;Parent=gene390;Dbxref=Genbank:NP_624725.1,GeneID:1095827;Name=NP_624725.1;Note=SCF51.03%2C possible 2-haloalkanoic acid dehalogenase%2C len: 246 aa%3B similar to SW:HAD2_PSEPU (EMBL:D17523) Pseudomonas putida 2-haloalkanoic acid dehalogenase H-109 (EC 3.8.1.2) (L-2-haloacid dehalogenase H-109) (halocarboxylic acid halidohydrolase H-109) DehH109%2C 224 aa: fasta scores: opt: 275 z-score: 328.4 E(): 6.4e-11%3B 32.2%25 identity in 202 aa overlap. Contains a Pfam match to entry PF00702 hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=SCF51.03;product=2-haloalkanoic acid dehalogenase;protein_id=NP_624725.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	425312	425899	.	+	.	ID=id404;Dbxref=GeneID:1095827;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 27.80%2C E-value 2.7e-05;gbkey=misc_feature;gene=SCF51.03
NC_003888.3	RefSeq	gene	426015	426833	.	-	.	ID=gene391;Dbxref=GeneID:1095828;Name=SCF51.04c;gbkey=Gene;gene=SCF51.04c;gene_biotype=protein_coding;gene_synonym=SCF51.04c;locus_tag=SCO0405
NC_003888.3	RefSeq	CDS	426015	426833	.	-	0	ID=cds377;Parent=gene391;Dbxref=Genbank:NP_624726.1,GeneID:1095828;Name=NP_624726.1;Note=SCF51.04%2C conserved hypothetical protein%2C len: 272 aa%3B similar to TR:O86540 (EMBL:AL031350) Streptomyces coelicolor hypothetical 32.8 kD protein%2C 300 aa%3B fasta scores: opt: 656 z-score: 793.0 E(): 0%3B 43.1%25 identity in 246 aa overlap;gbkey=CDS;gene=SCF51.04c;product=hypothetical protein;protein_id=NP_624726.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	426843	426847	.	-	.	ID=id405;gbkey=RBS
NC_003888.3	RefSeq	gene	426893	427606	.	+	.	ID=gene392;Dbxref=GeneID:1095829;Name=SCF51.05;gbkey=Gene;gene=SCF51.05;gene_biotype=protein_coding;gene_synonym=SCF51.05;locus_tag=SCO0406
NC_003888.3	RefSeq	CDS	426893	427606	.	+	0	ID=cds378;Parent=gene392;Dbxref=Genbank:NP_624727.1,GeneID:1095829;Name=NP_624727.1;Note=SCF51.05%2C unknown%2C len: 237 aa;gbkey=CDS;gene=SCF51.05;product=hypothetical protein;protein_id=NP_624727.1;transl_table=11
NC_003888.3	RefSeq	gene	427610	428614	.	+	.	ID=gene393;Dbxref=GeneID:1095830;Name=SCF51.06;gbkey=Gene;gene=SCF51.06;gene_biotype=protein_coding;gene_synonym=SCF51.06;locus_tag=SCO0407
NC_003888.3	RefSeq	CDS	427610	428614	.	+	0	ID=cds379;Parent=gene393;Dbxref=Genbank:NP_624728.1,GeneID:1095830;Name=NP_624728.1;Note=SCF51.06%2C possible transcriptional regulator%2C len: 334 aa%3B similar to SW:TIPA_STRLI (EMBL:S64314) Streptomyces lividans transcriptional activator TipA%2C 253 aa%3B fasta scores: opt: 215 z-score: 237.9 E(): 7e-06%3B 37.9%25 identity in 103 aa overlap and to TR:O54191 (EMBL:AL021411) Streptomyces coelicolor transcriptional regulator SC7H1.32c%2C len: 196 aa%3B fasta scores: opt: 264 z-score: 290.9 E(): 7.8e-09%3B 37.4%25 identity in 139 aa overlap. Contains a Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and a prosite match to entry PS00552 Bacterial regulatory proteins%2C merR family signature. Contains possible helix-turn-helix motif between residues 3351..3416%2C score 1170 (+3.17 SD);gbkey=CDS;gene=SCF51.06;product=transcriptional regulator;protein_id=NP_624728.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	427610	427675	.	+	.	ID=id406;Dbxref=GeneID:1095830;Note=Helix-turn-helix from SCF51.06 score 1170;gbkey=misc_feature;gene=SCF51.06
NC_003888.3	RefSeq	sequence_feature	427619	427726	.	+	.	ID=id407;Dbxref=GeneID:1095830;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 44.50%2C E-value 2.3e-09;gbkey=misc_feature;gene=SCF51.06
NC_003888.3	RefSeq	sequence_feature	427619	427687	.	+	.	ID=id408;Dbxref=GeneID:1095830;Note=PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=misc_feature;gene=SCF51.06
NC_003888.3	RefSeq	gene	428615	429403	.	+	.	ID=gene394;Dbxref=GeneID:1095831;Name=SCF51.07;gbkey=Gene;gene=SCF51.07;gene_biotype=protein_coding;gene_synonym=SCF51.07;locus_tag=SCO0408
NC_003888.3	RefSeq	CDS	428615	429403	.	+	0	ID=cds380;Parent=gene394;Dbxref=Genbank:NP_624729.1,GeneID:1095831;Name=NP_624729.1;Note=SCF51.07%2C probable methyltransferase%2C len: 262 aa%3B some similarity to TR:Q9ZGH6 (EMBL:AF079762) Streptomyces venezuelae N%2CN-dimethyltransferase DesVI 273 aa%3B fasta scores: opt: 165 z-score: 205.9 E(): 0.00043%3B 28.3%25 identity in 237 aa overlap and to TR:CAB49808 (EMBL:AJ248285) Pyrococcus abyssi menaquinone biosynthesis methyltransferase%2C 248 aa%3B fasta scores: opt: 165 z-score: 205.6 E(): 0.00044%3B 27.3%25 identity in 183 aa overlap;gbkey=CDS;gene=SCF51.07;product=methyltransferase;protein_id=NP_624729.1;transl_table=11
NC_003888.3	RefSeq	gene	429492	429956	.	-	.	ID=gene395;Dbxref=GeneID:1095832;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;gene_synonym=sapA,SCF51.08c;locus_tag=SCO0409
NC_003888.3	RefSeq	CDS	429492	429956	.	-	0	ID=cds381;Parent=gene395;Dbxref=Genbank:NP_624730.1,GeneID:1095832;Name=NP_624730.1;Note=SCF51.08c%2C sapA spore-associated protein precursor%2C len: 154 aa%3B N-terminal region identical to SW:SAPA_STRCO (EMBL:M20145) Streptomyces coelicolor spore-associated protein precursor (fragment) SapA%2C 120 aa;gbkey=CDS;gene=sapA;product=spore-associated protein;protein_id=NP_624730.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	429973	429976	.	-	.	ID=id409;gbkey=RBS
NC_003888.3	RefSeq	gene	430071	431321	.	-	.	ID=gene396;Dbxref=GeneID:1095833;Name=SCF51.09c;gbkey=Gene;gene=SCF51.09c;gene_biotype=protein_coding;gene_synonym=SCF51.09c;locus_tag=SCO0410
NC_003888.3	RefSeq	CDS	430071	431321	.	-	0	ID=cds382;Parent=gene396;Dbxref=Genbank:NP_624731.1,GeneID:1095833;Name=NP_624731.1;Note=SCF51.09c%2C hypothetical protein%2C len: 416 aa%3B similar to TR:Q49897 (EMBL:U00021) Mycobacterium leprae hypothetical protein MLC1351.13c%2C 311 aa%3B fasta scores: opt: 288 z-score: 317.7 E(): 2.5e-10%3B 34.4%25 identity in 326 aa overlap. Contains Pfam match to entry PF01513 DUF15%2C domain of unknown function and prosite PS00339 aminoacyl-transfer RNA synthetases class-II signature 2;gbkey=CDS;gene=SCF51.09c;product=hypothetical protein;protein_id=NP_624731.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	430239	431159	.	-	.	ID=id410;Dbxref=GeneID:1095833;Note=Pfam match to entry PF01513 DUF15%2C Domain of unknown function%2C score 150.90%2C E-value 2.2e-41;gbkey=misc_feature;gene=SCF51.09c
NC_003888.3	RefSeq	sequence_feature	431136	431165	.	-	.	ID=id411;Dbxref=GeneID:1095833;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2;gbkey=misc_feature;gene=SCF51.09c
NC_003888.3	RefSeq	gene	431327	431551	.	+	.	ID=gene397;Dbxref=GeneID:1095834;Name=SCF51.10;gbkey=Gene;gene=SCF51.10;gene_biotype=protein_coding;gene_synonym=SCF51.10;locus_tag=SCO0411
NC_003888.3	RefSeq	CDS	431327	431551	.	+	0	ID=cds383;Parent=gene397;Dbxref=Genbank:NP_624732.1,GeneID:1095834;Name=NP_624732.1;Note=SCF51.10%2C unknown%2C len: 74 aa. Contains a prosite match to entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF51.10;product=hypothetical protein;protein_id=NP_624732.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	431366	431389	.	+	.	ID=id412;Dbxref=GeneID:1095834;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF51.10
NC_003888.3	RefSeq	gene	431551	431934	.	+	.	ID=gene398;Dbxref=GeneID:1095835;Name=SCF51.11;gbkey=Gene;gene=SCF51.11;gene_biotype=protein_coding;gene_synonym=SCF51.11;locus_tag=SCO0412
NC_003888.3	RefSeq	CDS	431551	431934	.	+	0	ID=cds384;Parent=gene398;Dbxref=Genbank:NP_624733.1,GeneID:1095835;Name=NP_624733.1;Note=SCF51.11%2C unknown%2C len: 127 aa;gbkey=CDS;gene=SCF51.11;product=hypothetical protein;protein_id=NP_624733.1;transl_table=11
NC_003888.3	RefSeq	gene	431962	432564	.	-	.	ID=gene399;Dbxref=GeneID:1095836;Name=SCF51.12c;gbkey=Gene;gene=SCF51.12c;gene_biotype=protein_coding;gene_synonym=SCF51.12c;locus_tag=SCO0413
NC_003888.3	RefSeq	CDS	431962	432564	.	-	0	ID=cds385;Parent=gene399;Dbxref=Genbank:NP_624734.1,GeneID:1095836;Name=NP_624734.1;Note=SCF51.12c%2C unknown%2C len: 200 aa.;gbkey=CDS;gene=SCF51.12c;product=hypothetical protein;protein_id=NP_624734.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	432570	432574	.	-	.	ID=id413;gbkey=RBS
NC_003888.3	RefSeq	gene	432617	433513	.	-	.	ID=gene400;Dbxref=GeneID:1095837;Name=SCF51.13c;gbkey=Gene;gene=SCF51.13c;gene_biotype=protein_coding;gene_synonym=SCF51.13c;locus_tag=SCO0414
NC_003888.3	RefSeq	CDS	432617	433513	.	-	0	ID=cds386;Parent=gene400;Dbxref=Genbank:NP_624735.1,GeneID:1095837;Name=NP_624735.1;Note=SCF51.13c%2C possible RNA polymerase sigma factor%2C len: 298 aa%3B similar to TR:CAB42013 (EMBL:AL049754) Streptomyces coelicolor  RNA polymerase sigma factor SCH10.4c%2C 294aa%3B fasta scores: opt: 614 z-score: 721.0 E(): 8.7e-33%3B 41.4%25 identity in 285 aa overlap and to TR:O86856 (EMBL:AJ007313) Streptomyces coelicolor sigma factor%2C SigT%2C 236aa%3B fasta scores: opt: 160 z-score: 194.6 E(): 0.0018%3B 31.0%25 identity in 158 aa overlap;gbkey=CDS;gene=SCF51.13c;product=RNA polymerase sigma factor;protein_id=NP_624735.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	433526	433529	.	-	.	ID=id414;gbkey=RBS
NC_003888.3	RefSeq	gene	433615	433977	.	+	.	ID=gene401;Dbxref=GeneID:1095838;Name=SCF51.14;gbkey=Gene;gene=SCF51.14;gene_biotype=protein_coding;gene_synonym=SCF51.14;locus_tag=SCO0415
NC_003888.3	RefSeq	CDS	433615	433977	.	+	0	ID=cds387;Parent=gene401;Dbxref=Genbank:NP_624736.1,GeneID:1095838;Name=NP_624736.1;Note=SCF51.14%2C possible integral membrane protein%2C len: 120 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCF51.14;product=hypothetical protein;protein_id=NP_624736.1;transl_table=11
NC_003888.3	RefSeq	gene	433984	434589	.	-	.	ID=gene402;Dbxref=GeneID:1095839;Name=SCF51.15c;gbkey=Gene;gene=SCF51.15c;gene_biotype=protein_coding;gene_synonym=SCF51.15c;locus_tag=SCO0416
NC_003888.3	RefSeq	CDS	433984	434589	.	-	0	ID=cds388;Parent=gene402;Dbxref=Genbank:NP_624737.1,GeneID:1095839;Name=NP_624737.1;Note=SCF51.15c%2C probable integral membrane protein%2C len: 201 aa%3B similarity to SW:CMLR_STRLI (EMBL:X59968) Streptomyces lividans chloramphenicol resistance protein%2C 392aa%3B fasta scores: opt: 123 z-score: 149.4 E(): 0.6%3B 30.5%25 identity in 177 aa overlap;gbkey=CDS;gene=SCF51.15c;product=hypothetical protein;protein_id=NP_624737.1;transl_table=11
NC_003888.3	RefSeq	gene	434651	435397	.	-	.	ID=gene403;Dbxref=GeneID:1095840;Name=SCF51.16c;gbkey=Gene;gene=SCF51.16c;gene_biotype=protein_coding;gene_synonym=SCF51.16c;locus_tag=SCO0417
NC_003888.3	RefSeq	CDS	434651	435397	.	-	0	ID=cds389;Parent=gene403;Dbxref=Genbank:NP_624738.1,GeneID:1095840;Name=NP_624738.1;Note=SCF51.16c%2C hypothetical protein%2C len: 248 aa%3B similar to TR:P74164 (EMBL:D90912) Synechocystis sp. (strain PCC 6803) hypothetical 33.9 KD protein%2C 300 aa%3B fasta scores: opt: 361 z-score: 423.5 E(): 3.2e-16%3B 35.9%25 identity in 259 aa overlap;gbkey=CDS;gene=SCF51.16c;product=hypothetical protein;protein_id=NP_624738.1;transl_table=11
NC_003888.3	RefSeq	gene	435456	436103	.	+	.	ID=gene404;Dbxref=GeneID:1095841;Name=SCF51.17;gbkey=Gene;gene=SCF51.17;gene_biotype=protein_coding;gene_synonym=SCF51.17;locus_tag=SCO0418
NC_003888.3	RefSeq	CDS	435456	436103	.	+	0	ID=cds390;Parent=gene404;Dbxref=Genbank:NP_624739.1,GeneID:1095841;Name=NP_624739.1;Note=SCF51.17%2C DNA-binding protein%2C len: 215 aa%3B similar to TR:CAB44405 (EMBL:AL078610) Streptomyces coelicolor DNA-binding protein%2C SCH35.22c 215 aa%3B fasta scores: opt: 206 z-score: 233.8 E(): 1.2e-05%3B 30.9%25 identity in 220 aa overlap and to TR:CAB45035 (EMBL:AL078635) Amycolatopsis orientalis hypothetical protein CZA382.14c%2C 202 aa%3B fasta scores: opt: 305 z-score: 340.6 E(): 1.3e-11%3B 34.0%25 identity in 212 aa overlap;gbkey=CDS;gene=SCF51.17;product=DNA-binding protein;protein_id=NP_624739.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	436215	436218	.	+	.	ID=id415;gbkey=RBS
NC_003888.3	RefSeq	gene	436235	437224	.	+	.	ID=gene405;Dbxref=GeneID:1095842;Name=SCF51.18;gbkey=Gene;gene=SCF51.18;gene_biotype=protein_coding;gene_synonym=SCF51.18;locus_tag=SCO0419
NC_003888.3	RefSeq	CDS	436235	437224	.	+	0	ID=cds391;Parent=gene405;Dbxref=Genbank:NP_624740.1,GeneID:1095842;Name=NP_624740.1;Note=SCF51.18%2C possible zinc-binding oxidoreductase%2C len: 329 aa%3B similar to SW:QOR_PSEAE (EMBL:X85015) Pseudomonas aeruginosa quinone oxidoreductase (EC 1.6.5.5) (NADPH:quinone reductase) qor%2C 325 aa%3B fasta scores: opt: 420 z-score: 452.5 E(): 7.8e-18%3B 32.8%25 identity in 332 aa overlap and to TR:CAB45348 (EMBL:AL079345) Streptomyces coelicolor  dehydrogenase SCE68.12c%2C 318 aa%3B fasta scores: opt: 535 z-score: 574.1 E(): 1.3e-24%3B 38.6%25 identity in 332 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SCF51.18;product=zinc-binding oxidoreductase;protein_id=NP_624740.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	436253	437215	.	+	.	ID=id416;Dbxref=GeneID:1095842;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score -9.20%2C E-value 2.9e-09;gbkey=misc_feature;gene=SCF51.18
NC_003888.3	RefSeq	gene	437253	438287	.	-	.	ID=gene406;Dbxref=GeneID:1095843;Name=SCF51.19c;gbkey=Gene;gene=SCF51.19c;gene_biotype=protein_coding;gene_synonym=SCF51.19c;locus_tag=SCO0420
NC_003888.3	RefSeq	CDS	437253	438287	.	-	0	ID=cds392;Parent=gene406;Dbxref=Genbank:NP_624741.1,GeneID:1095843;Name=NP_624741.1;Note=SCF51.19c%2C possible homoserine dehydrogenase%2C len: 344 aa%3B similar to SW:DHOM_SYNY3 (EMBL:D64001) Synechocystis sp. (strain PCC 6803) homoserine dehydrogenase (EC 1.1.1.3) (HDH)%2C 433 aa%3B fasta scores: opt: 284 z-score: 307.6 E(): 9.2e-10%3B 29.0%25 identity in 335 aa overlap and to TR:O26517 (EMBL:AE000826) Methanobacterium thermoautotrophicum homoserine dehydrogenase homologue MTH417%2C 340 aa%3B fasta scores: opt: 332 z-score: 359.9 E(): 1.1e-12%3B 30.1%25 identity in 335 aa overlap. Contains Prosite match to entry PS01042 Homoserine dehydrogenase signature;gbkey=CDS;gene=SCF51.19c;product=homoserine dehydrogenase;protein_id=NP_624741.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	437613	437681	.	-	.	ID=id417;Dbxref=GeneID:1095843;Note=PS01042 Homoserine dehydrogenase signature;gbkey=misc_feature;gene=SCF51.19c
NC_003888.3	RefSeq	ribosome_entry_site	438299	438303	.	-	.	ID=id418;gbkey=RBS
NC_003888.3	RefSeq	gene	438329	438988	.	-	.	ID=gene407;Dbxref=GeneID:1095844;Name=SCF51.20c;gbkey=Gene;gene=SCF51.20c;gene_biotype=protein_coding;gene_synonym=SCF51.20c;locus_tag=SCO0421
NC_003888.3	RefSeq	CDS	438329	438988	.	-	0	ID=cds393;Parent=gene407;Dbxref=Genbank:NP_624742.1,GeneID:1095844;Name=NP_624742.1;Note=SCF51.20c%2C possible two-component response regulator%2C len: 219 aa%3B similar to TR:CAB51249 (EMBL:AL096872) Streptomyces coelicolor two-component response regulator%2C SC5F7.36c%2C 227 aa%3B fasta scores: opt: 815 z-score: 952.9 E(): 0%3B 61.8%25 identity in 220 aa overlap and to TR:Q53894 (EMBL:U51332) Streptomyces coelicolor absA2%2C 222 aa%3B fasta scores: opt: 543 z-score: 638.7 E(): 3.3e-28%3B 43.8%25 identity in 217 aa overlap. Contains two Pfam matches to entries PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and PF00072 response_reg%2C Response regulator receiver domain and Prosite match to entry PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible helix-turn-helix motif between residues 14157..14222%2C score 1198 (+3.27 SD);gbkey=CDS;gene=SCF51.20c;product=two-component response regulator;protein_id=NP_624742.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	438338	438535	.	-	.	ID=id419;Dbxref=GeneID:1095844;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 82.90%2C E-value 6.4e-21;gbkey=misc_feature;gene=SCF51.20c
NC_003888.3	RefSeq	sequence_feature	438416	438481	.	-	.	ID=id420;Dbxref=GeneID:1095844;Note=Helix-turn-helix from SCF51.20c score 1198;gbkey=misc_feature;gene=SCF51.20c
NC_003888.3	RefSeq	sequence_feature	438476	438499	.	-	.	ID=id421;Dbxref=GeneID:1095844;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF51.20c
NC_003888.3	RefSeq	sequence_feature	438647	438988	.	-	.	ID=id422;Dbxref=GeneID:1095844;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 107.80%2C E-value 2.1e-28;gbkey=misc_feature;gene=SCF51.20c
NC_003888.3	RefSeq	gene	438997	440190	.	-	.	ID=gene408;Dbxref=GeneID:1095845;Name=SCF51.21c;gbkey=Gene;gene=SCF51.21c;gene_biotype=protein_coding;gene_synonym=SCF51.21c;locus_tag=SCO0422
NC_003888.3	RefSeq	CDS	438997	440190	.	-	0	ID=cds394;Parent=gene408;Dbxref=Genbank:NP_624743.1,GeneID:1095845;Name=NP_624743.1;Note=SCF51.21c%2C possible two-component sensor kinase%2C len: 397 aa%3B similar to TR:CAB51250 (EMBL:AL096872) Streptomyces coelicolor  two-component sensor kinase%2C SC5F7.35c%2C 416 aa%3B fasta scores: opt: 841 z-score: 875.2 E(): 0%3B 43.5%25 identity in 393 aa overlap and to TR:Q53893 (EMBL:U51332) Streptomyces coelicolor AbsA1%2C571 aa%3B fasta scores: opt: 369 z-score: 385.9 E(): 4e-14%3B 30.5%25 identity in 394 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCF51.21c;product=two-component sensor kinase;protein_id=NP_624743.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	440197	440201	.	-	.	ID=id423;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	440227	440280	.	+	.	ID=id424;gbkey=stem_loop
NC_003888.3	RefSeq	gene	440282	442579	.	-	.	ID=gene409;Dbxref=GeneID:1095846;Name=SCF51A.01c;gbkey=Gene;gene=SCF51A.01c;gene_biotype=protein_coding;gene_synonym=SCF51A.01c;locus_tag=SCO0423
NC_003888.3	RefSeq	CDS	440282	442579	.	-	0	ID=cds395;Parent=gene409;Dbxref=Genbank:NP_624744.1,GeneID:1095846;Name=NP_624744.1;Note=SCF51A.01c%2C membrane transport protein%2C len: 765 aa. Similar to many Streptomyces coelicolor integral membrane proteins including:TR:Q53902 (EMBL%3B M64683) ORF1-4 (ACTII) (711 aa)%2Cfasta scores opt: 291 z-score: 295.3 E(): 4.3e-09 27.7%25 identity in 779 aa overlap%2C TR:Q9Z577 (EMBL%3B AL035569) SC8D9.14 (748 aa)%2C fasta scores opt: 1021 z-score: 1028.4 E(): 0 40.6%25 identity in 773 aa overlap and TR:O88022 (EMBL%3B AL031107) SC5A7.16C (705 aa)%2C fasta scores opt: 639 z-score: 645.0 E(): 1.4e-28 37.2%25 identity in 764 aa overlap. Contains multiple possible transmembrane hydrophobic domains.;gbkey=CDS;gene=SCF51A.01c;product=membrane transport protein;protein_id=NP_624744.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	442692	442697	.	+	.	ID=id425;gbkey=RBS
NC_003888.3	RefSeq	gene	442700	443191	.	+	.	ID=gene410;Dbxref=GeneID:1095847;Name=SCF51A.02;gbkey=Gene;gene=SCF51A.02;gene_biotype=protein_coding;gene_synonym=SCF51A.02;locus_tag=SCO0424
NC_003888.3	RefSeq	CDS	442700	443191	.	+	0	ID=cds396;Parent=gene410;Dbxref=Genbank:NP_624745.1,GeneID:1095847;Name=NP_624745.1;Note=SCF51A.02%2C unknown%2C len: 168 aa.;gbkey=CDS;gene=SCF51A.02;product=hypothetical protein;protein_id=NP_624745.1;transl_table=11
NC_003888.3	RefSeq	gene	443293	444243	.	-	.	ID=gene411;Dbxref=GeneID:1095848;Name=SCF51A.03c;gbkey=Gene;gene=SCF51A.03c;gene_biotype=protein_coding;gene_synonym=SCF51A.03c;locus_tag=SCO0425
NC_003888.3	RefSeq	CDS	443293	444243	.	-	0	ID=cds397;Parent=gene411;Dbxref=Genbank:NP_624746.1,GeneID:1095848;Name=NP_624746.1;Note=SCF51A.03c%2C unknown%2C len: 316 aa. Similar to Streptomyces coelicolor TR:CAB46385 (EMBL%3B AL096743) hypothetical 30.5 KD protein SCI7.02C (281 aa)%2C fasta scores opt: 424 z-score: 490.6 E(): 5.7e-20 36.6%25 identity in 292 aa overlap.;gbkey=CDS;gene=SCF51A.03c;product=hypothetical protein;protein_id=NP_624746.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	444248	444253	.	-	.	ID=id426;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	444428	444430	.	+	.	ID=id427;gbkey=RBS
NC_003888.3	RefSeq	gene	444441	444671	.	+	.	ID=gene412;Dbxref=GeneID:1095849;Name=SCF51A.04;gbkey=Gene;gene=SCF51A.04;gene_biotype=protein_coding;gene_synonym=SCF51A.04;locus_tag=SCO0426
NC_003888.3	RefSeq	CDS	444441	444671	.	+	0	ID=cds398;Parent=gene412;Dbxref=Genbank:NP_624747.1,GeneID:1095849;Name=NP_624747.1;Note=SCF51A.04%2C unknown%2C len: 76 aa.;gbkey=CDS;gene=SCF51A.04;product=hypothetical protein;protein_id=NP_624747.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	444744	444747	.	+	.	ID=id428;gbkey=RBS
NC_003888.3	RefSeq	gene	444752	445588	.	+	.	ID=gene413;Dbxref=GeneID:1095850;Name=SCF51A.05;gbkey=Gene;gene=SCF51A.05;gene_biotype=protein_coding;gene_synonym=SCF51A.05;locus_tag=SCO0427
NC_003888.3	RefSeq	CDS	444752	445588	.	+	0	ID=cds399;Parent=gene413;Dbxref=Genbank:NP_624748.1,GeneID:1095850;Name=NP_624748.1;Note=SCF51A.05%2C possible hydrolase%2C len: 278 aa. Similar to many e.g. Pseudomonas fluorescens SW:PRXC_PSEFL (EMBL:AF031153) non-heme chloroperoxidase (EC 1.11.1.10) (chloride peroxidase)%2C fasta scores opt: 243 z-score: 282.1 E(): 2.4e-08 28.4%25 identity in 275 aa overlap and many hydrolases: Streptomyces coelicolor TR:CAB44393 (EMBL%3B AL078610) hydrolase SCH35.34C (269 aa)%2C fasta scores opt: 259 z-score: 300.1 E(): 2.3e-09 29.7%25 identity in 269 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SCF51A.05;product=hydrolase;protein_id=NP_624748.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	444893	445564	.	+	.	ID=id429;Dbxref=GeneID:1095850;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 74.40%2C E-value 2.4e-18;gbkey=misc_feature;gene=SCF51A.05
NC_003888.3	RefSeq	ribosome_entry_site	445604	445608	.	+	.	ID=id430;gbkey=RBS
NC_003888.3	RefSeq	gene	445611	446144	.	+	.	ID=gene414;Dbxref=GeneID:1095851;Name=SCF51A.06;gbkey=Gene;gene=SCF51A.06;gene_biotype=protein_coding;gene_synonym=SCF51A.06;locus_tag=SCO0428
NC_003888.3	RefSeq	CDS	445611	446144	.	+	0	ID=cds400;Parent=gene414;Dbxref=Genbank:NP_624749.1,GeneID:1095851;Name=NP_624749.1;Note=SCF51A.06%2C possible tetR family transcriptional regulator%2C len: 177 aa. Similar to many regulators e.g. Streptomyces coelicolor TR:Q9ZBU4 (EMBL%3B AL034446) transcriptional regulator SC1A9.08C (189 aa)%2C fasta scores opt: 402 z-score: 476.9 E(): 3.3e-19 45.5%25 identity in 165 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif between residues 18..39 (+2.91 SD).;gbkey=CDS;gene=SCF51A.06;product=tetR family transcriptional regulator;protein_id=NP_624749.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	445611	445721	.	+	.	ID=id431;Dbxref=GeneID:1095851;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 17.50%2C E-value 0.0041;gbkey=misc_feature;gene=SCF51A.06
NC_003888.3	RefSeq	gene	446214	447161	.	-	.	ID=gene415;Dbxref=GeneID:1095852;Name=SCF51A.07c;gbkey=Gene;gene=SCF51A.07c;gene_biotype=protein_coding;gene_synonym=SCF51A.07c;locus_tag=SCO0429
NC_003888.3	RefSeq	CDS	446214	447161	.	-	0	ID=cds401;Parent=gene415;Dbxref=Genbank:NP_624750.1,GeneID:1095852;Name=NP_624750.1;Note=SCF51A.07c%2C possible oxidoreductase%2C len: 315 aa. Weakly similar to many eukaryotic oxidoreductases e.g. Hordeum vulgare (Barley) TR:Q42837 (EMBL%3B Z48360) aldose reductase (EC 1.1.1.21) (aldehyde reductase) (320 aa)%2C fasta scores opt: 236 z-score: 263.3 E(): 2.6e-07 27.0%25 identity in 296 aa overlap and many other oxidoreductases e.g. Streptomyces coelicolor TR:CAB42953 (EMBL:AL049863) oxidoreductase SC5H1.28C (305 aa)%2C fasta scores opt: 563 z-score: 617.0 E(): 5.2e-27 39.7%25 identity in 305 aa overlap;gbkey=CDS;gene=SCF51A.07c;product=oxidoreductase;protein_id=NP_624750.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	447172	447176	.	-	.	ID=id432;gbkey=RBS
NC_003888.3	RefSeq	gene	447185	447868	.	+	.	ID=gene416;Dbxref=GeneID:1095853;Name=SCF51A.08;gbkey=Gene;gene=SCF51A.08;gene_biotype=protein_coding;gene_synonym=SCF51A.08;locus_tag=SCO0430
NC_003888.3	RefSeq	CDS	447185	447868	.	+	0	ID=cds402;Parent=gene416;Dbxref=Genbank:NP_624751.1,GeneID:1095853;Name=NP_624751.1;Note=SCF51A.08%2C possible tetR family transcriptional regulator%2C len: 227 aa. Similar to several regulators e.g. Streptomyces coelicolor TR:CAB46405 (EMBL%3B AL096743) transcriptional regulator SCI7.22c (202 aa)%2C fasta scores opt: 428 z-score: 495.6 E(): 3e-20 41.1%25 identity in 202 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif between residues 71..92 (+3.86 SD).;gbkey=CDS;gene=SCF51A.08;product=tetR family transcriptional regulator;protein_id=NP_624751.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	447347	447484	.	+	.	ID=id433;Dbxref=GeneID:1095853;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 29.80%2C E-value 1.5e-06;gbkey=misc_feature;gene=SCF51A.08
NC_003888.3	RefSeq	gene	447890	449218	.	-	.	ID=gene417;Dbxref=GeneID:1095854;Name=SCF51A.09c;gbkey=Gene;gene=SCF51A.09c;gene_biotype=protein_coding;gene_synonym=SCF51A.09c;locus_tag=SCO0431
NC_003888.3	RefSeq	CDS	447890	449218	.	-	0	ID=cds403;Parent=gene417;Dbxref=Genbank:NP_624752.1,GeneID:1095854;Name=NP_624752.1;Note=SCF51A.09c%2C possible hypothetical protein%2C len: 442 aa%3B similar to TR:Q9KZR1 (EMBL:AL353832) Streptomyces coelicolor  hypothetical protein SCE6.29%2C 454 aa%3B fasta scores: opt: 614 Z-score: 655.9 E(): 6.7e-29%3B 31.278%25 identity in 454 aa overlap. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SCF51A.09c;product=hypothetical protein;protein_id=NP_624752.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	449501	449504	.	+	.	ID=id434;gbkey=RBS
NC_003888.3	RefSeq	gene	449515	453252	.	+	.	ID=gene418;Dbxref=GeneID:1095855;Name=SCF51A.10;gbkey=Gene;gene=SCF51A.10;gene_biotype=protein_coding;gene_synonym=SCF51A.10;locus_tag=SCO0432
NC_003888.3	RefSeq	CDS	449515	453252	.	+	0	ID=cds404;Parent=gene418;Dbxref=Genbank:NP_624753.1,GeneID:1095855;Name=NP_624753.1;Note=SCF51A.10%2C probable  peptidase%2C len: 1245 aa. Highly similar to Streptomyces albogriseolus TR:P95684 (EMBL%3B D83672) subtilisin-like protease (1102 aa)%2C fasta scores opt: 1572 z-score: 1550.1 E(): 0 34.4%25 identity in 1259 aa overlap. Also similar to the much smaller subtilisins e.g. Bacillus sp. (strain TA39) SW:SUBT_BACS9 (EMBL%3B X62369) subtilisin precursor (EC 3.4.21.62) (420 aa)%2C fasta scores opt: 485 z-score: 483.5 E(): 1.4e-19 38.2%25 identity in 304 aa overlap. Contains a Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF51A.10;product=peptidase;protein_id=NP_624753.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	450166	451035	.	+	.	ID=id435;Dbxref=GeneID:1095855;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 187.70%2C E-value 1.8e-52;gbkey=misc_feature;gene=SCF51A.10
NC_003888.3	RefSeq	ribosome_entry_site	453359	453363	.	+	.	ID=id436;gbkey=RBS
NC_003888.3	RefSeq	gene	453370	454374	.	+	.	ID=gene419;Dbxref=GeneID:1095856;Name=SCF51A.11;gbkey=Gene;gene=SCF51A.11;gene_biotype=protein_coding;gene_synonym=SCF51A.11;locus_tag=SCO0433
NC_003888.3	RefSeq	CDS	453370	454374	.	+	0	ID=cds405;Parent=gene419;Dbxref=Genbank:NP_624754.1,GeneID:1095856;Name=NP_624754.1;Note=SCF51A.11%2C possible transcriptional regulator%2C len: 334 aa. Similar to Streptomyces coelicolor TR:Q9ZBT5 (EMBL%3B AL034446)  regulatory protein SC1A9.17C (327 aa)%2C fasta scores opt: 494 z-score: 573.8 E(): 1.3e-24 36.9%25 identity in 333 aa overlap. Contains a possible helix-turn-helix motif between residues 290..311 (+2.71 SD).;gbkey=CDS;gene=SCF51A.11;product=transcriptional regulator;protein_id=NP_624754.1;transl_table=11
NC_003888.3	RefSeq	gene	454546	456195	.	+	.	ID=gene420;Dbxref=GeneID:1095857;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;gene_synonym=malX;locus_tag=SCO0434
NC_003888.3	RefSeq	CDS	454546	456195	.	+	0	ID=cds406;Parent=gene420;Dbxref=Genbank:NP_624755.1,GeneID:1095857;Name=NP_624755.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site;gbkey=CDS;gene=malX;product=bifunctional PTS system maltose and glucose-specific transporter subunits IICB;protein_id=NP_624755.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	455956	456060	.	+	.	ID=id437;Dbxref=GeneID:1095857;Note=Pfam match to entry PF00367 PTS_EIIB%2C phosphotransferase system%2C EIIB%2C score 51.00%2C E-value 3.7e-13;gbkey=misc_feature;gene=malX
NC_003888.3	RefSeq	sequence_feature	455992	456045	.	+	.	ID=id438;Dbxref=GeneID:1095857;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=malX
NC_003888.3	RefSeq	gene	456192	457397	.	+	.	ID=gene421;Dbxref=GeneID:1095858;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;gene_synonym=malY;locus_tag=SCO0435
NC_003888.3	RefSeq	CDS	456192	457397	.	+	0	ID=cds407;Parent=gene421;Dbxref=Genbank:NP_624756.1,GeneID:1095858;Name=NP_624756.1;Note=SCF51A.13%2C malY%2C aminotransferase%2C len: 401 aa. Highly similar to Escherichia coli SW:MALY_ECOLI (EMBL%3B M60722) MalY protein (EC 2.6.1.-) (390 aa)%2C fasta scores opt: 1577 z-score: 1814.7 E():0 58.5%25 identity in 386 aa overlap;gbkey=CDS;gene=malY;product=aminotransferase;protein_id=NP_624756.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	457469	457476	.	+	.	ID=id439;gbkey=RBS
NC_003888.3	RefSeq	gene	457484	457654	.	+	.	ID=gene422;Dbxref=GeneID:1095859;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;gene_synonym=SCF51A.14;locus_tag=SCO0436
NC_003888.3	RefSeq	CDS	457484	457654	.	+	0	ID=cds408;Parent=gene422;Dbxref=Genbank:NP_624757.1,GeneID:1095859;Name=NP_624757.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=NP_624757.1;transl_table=11
NC_003888.3	RefSeq	gene	457670	458695	.	-	.	ID=gene423;Dbxref=GeneID:1095860;Name=SCF51A.15c;gbkey=Gene;gene=SCF51A.15c;gene_biotype=protein_coding;gene_synonym=SCF51A.15c;locus_tag=SCO0437
NC_003888.3	RefSeq	CDS	457670	458695	.	-	0	ID=cds409;Parent=gene423;Dbxref=Genbank:NP_624758.1,GeneID:1095860;Name=NP_624758.1;Note=SCF51A.15c%2C hypothetical protein%2C len: 341 aa%3B similar to TR:Q9A8Z7 (EMBL:AE005797) Caulobacter crescentus hypothetical protein CC1198%2C 331 aa%3B fasta scores: opt: 855 Z-score: 977.0 E(): 8.7e-47%3B 45.181%25 identity in 332 aa overlap;gbkey=CDS;gene=SCF51A.15c;product=hypothetical protein;protein_id=NP_624758.1;transl_table=11
NC_003888.3	RefSeq	gene	458695	459345	.	-	.	ID=gene424;Dbxref=GeneID:1095861;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;gene_synonym=pcp;locus_tag=SCO0438
NC_003888.3	RefSeq	CDS	458695	459345	.	-	0	ID=cds410;Parent=gene424;Dbxref=Genbank:NP_624759.1,GeneID:1095861;Name=NP_624759.1;Note=SCF51A.16c%2C pcp%2C pyrrolidone-carboxylate peptidase (EC 3.4.19.3)%2C len: 216 aa. Highly similar to many e.g. Bacillus subtilis SW:PCP_BACSU (EMBL%3B X66034) pyrrolidone-carboxylate peptidase (EC 3.4.19.3) (5-oxoprolyl-peptidase) (pyroglutamyl-peptidase I) (PGP-I) (pyrase)(215 aa)%2C fasta scores opt: 741 z-score: 820.9 E(): 0 52.3%25 identity in 214 aa overlap. Contains a Pfam match to entry PF01470 Peptidase_C15%2C Pyroglutamyl peptidase and a Prosite hit to PS01334 Pyrrolidone-carboxylate peptidase cysteine active site;gbkey=CDS;gene=pcp;product=pyrrolidone-carboxylate peptidase;protein_id=NP_624759.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	458706	458711	.	-	.	ID=id440;Dbxref=GeneID:1095861;gbkey=RBS;gene=pcp
NC_003888.3	RefSeq	sequence_feature	458737	459342	.	-	.	ID=id441;Dbxref=GeneID:1095861;Note=Pfam match to entry PF01470 Peptidase_C15%2C Pyroglutamyl peptidase%2C score 333.00%2C E-value 3.3e-96;gbkey=misc_feature;gene=pcp
NC_003888.3	RefSeq	sequence_feature	458914	458961	.	-	.	ID=id442;Dbxref=GeneID:1095861;Note=PS01334 Pyrrolidone-carboxylate peptidase cysteine active site;gbkey=misc_feature;gene=pcp
NC_003888.3	RefSeq	ribosome_entry_site	459352	459356	.	-	.	ID=id443;gbkey=RBS
NC_003888.3	RefSeq	gene	459393	460367	.	-	.	ID=gene425;Dbxref=GeneID:1095862;Name=SCF51A.17c;gbkey=Gene;gene=SCF51A.17c;gene_biotype=protein_coding;gene_synonym=SCF51A.17c;locus_tag=SCO0439
NC_003888.3	RefSeq	CDS	459393	460367	.	-	0	ID=cds411;Parent=gene425;Dbxref=Genbank:NP_624760.1,GeneID:1095862;Name=NP_624760.1;Note=SCF51A.17c%2C possible membrane protein%2C len: 324 aa. Contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF51A.17c;product=hypothetical protein;protein_id=NP_624760.1;transl_table=11
NC_003888.3	RefSeq	gene	460364	461083	.	-	.	ID=gene426;Dbxref=GeneID:1095863;Name=SCF51A.18c;gbkey=Gene;gene=SCF51A.18c;gene_biotype=protein_coding;gene_synonym=SCF51A.18c;locus_tag=SCO0440
NC_003888.3	RefSeq	CDS	460364	461083	.	-	0	ID=cds412;Parent=gene426;Dbxref=Genbank:NP_624761.1,GeneID:1095863;Name=NP_624761.1;Note=SCF51A.18c%2C possible integral membrane protein%2C len: 239 aa. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF51A.18c;product=hypothetical protein;protein_id=NP_624761.1;transl_table=11
NC_003888.3	RefSeq	gene	461350	462102	.	+	.	ID=gene427;Dbxref=GeneID:1095864;Name=SCF51A.19;gbkey=Gene;gene=SCF51A.19;gene_biotype=protein_coding;gene_synonym=SCF51A.19;locus_tag=SCO0441
NC_003888.3	RefSeq	CDS	461350	462102	.	+	0	ID=cds413;Parent=gene427;Dbxref=Genbank:NP_624762.1,GeneID:1095864;Name=NP_624762.1;Note=SCF51A.19%2C unknown%2C len: 250 aa. Similar to hypothetical proteins e.g. Bordetella pertussis TR:O30444 (EMBL%3B AF006000) hypothetical 26.3 KD protein (252 aa)%2C fasta scores opt: 742 z-score: 794.0 E(): 0 47.4%25 identity in 247 aa overlap.;gbkey=CDS;gene=SCF51A.19;product=LamB/YcsF family protein;protein_id=NP_624762.1;transl_table=11
NC_003888.3	RefSeq	gene	462099	462857	.	+	.	ID=gene428;Dbxref=GeneID:1095865;Name=SCF51A.20;gbkey=Gene;gene=SCF51A.20;gene_biotype=protein_coding;gene_synonym=SCF51A.20;locus_tag=SCO0442
NC_003888.3	RefSeq	CDS	462099	462857	.	+	0	ID=cds414;Parent=gene428;Dbxref=Genbank:NP_624763.1,GeneID:1095865;Name=NP_624763.1;Note=SCF51A.20%2C unknown%2C len: 252 aa. Similar to a number of hypothetical proteins e.g. Escherichia coli SW:YBGJ_ECOLI (EMBL%3B AE000174) hypothetical 23.9 KD protein in phrB-nei intergenic region (218 aa)%2C fasta scores: opt: 477 z-score: 492.1 E(): 4.7e-20 43.5%25 identity in 214 aa overlap;gbkey=CDS;gene=SCF51A.20;product=hypothetical protein;protein_id=NP_624763.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	462842	462846	.	+	.	ID=id444;Dbxref=GeneID:1095865;gbkey=RBS;gene=SCF51A.20
NC_003888.3	RefSeq	gene	462854	463711	.	+	.	ID=gene429;Dbxref=GeneID:1095866;Name=SCF51A.21;gbkey=Gene;gene=SCF51A.21;gene_biotype=protein_coding;gene_synonym=SCF51A.21;locus_tag=SCO0443
NC_003888.3	RefSeq	CDS	462854	463711	.	+	0	ID=cds415;Parent=gene429;Dbxref=Genbank:NP_624764.1,GeneID:1095866;Name=NP_624764.1;Note=SCF51A.21%2C unknown%2C len: 285 aa. Similar to a number of hypothetical proteins e.g. Mycobacterium tuberculosis TR:P95220 (EMBL%3B Z86089) hypothetical 32.2 KD protein (300 aa)%2C fasta scores opt: 714 z-score: 663.0 E(): 1.4e-29 45.3%25 identity in 289 aa overlap. Also similar in parts to Pseudomonas fluorescens TR:CAB48407 (EMBL%3B AJ243652) urea amidolyase homologue (1213 aa)%2C fasta scores opt: 423 z-score: 390.1 E(): 2.3e-14 37.7%25 identity in 289 aa overlap;gbkey=CDS;gene=SCF51A.21;product=hypothetical protein;protein_id=NP_624764.1;transl_table=11
NC_003888.3	RefSeq	gene	463698	464099	.	-	.	ID=gene430;Dbxref=GeneID:1095867;Name=SCF51A.22c;gbkey=Gene;gene=SCF51A.22c;gene_biotype=protein_coding;gene_synonym=SCF51A.22c;locus_tag=SCO0444
NC_003888.3	RefSeq	CDS	463698	464099	.	-	0	ID=cds416;Parent=gene430;Dbxref=Genbank:NP_624765.1,GeneID:1095867;Name=NP_624765.1;Note=SCF51A.22c%2C possible integral membrane protein%2C len: 133 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF51A.22c;product=hypothetical protein;protein_id=NP_624765.1;transl_table=11
NC_003888.3	RefSeq	gene	464207	465502	.	-	.	ID=gene431;Dbxref=GeneID:1095868;Name=SCF51A.23c;gbkey=Gene;gene=SCF51A.23c;gene_biotype=protein_coding;gene_synonym=SCF51A.23c;locus_tag=SCO0445
NC_003888.3	RefSeq	CDS	464207	465502	.	-	0	ID=cds417;Parent=gene431;Dbxref=Genbank:NP_624766.1,GeneID:1095868;Name=NP_624766.1;Note=SCF51A.23c%2C possible hypothetical protein%2C len: 405 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF51A.23c;product=hypothetical protein;protein_id=NP_624766.1;transl_table=11
NC_003888.3	RefSeq	gene	465496	465861	.	-	.	ID=gene432;Dbxref=GeneID:1095869;Name=SCF51A.24c;gbkey=Gene;gene=SCF51A.24c;gene_biotype=protein_coding;gene_synonym=SCF51A.24c;locus_tag=SCO0446
NC_003888.3	RefSeq	CDS	465496	465861	.	-	0	ID=cds418;Parent=gene432;Dbxref=Genbank:NP_624767.1,GeneID:1095869;Name=NP_624767.1;Note=SCF51A.24c%2C unknown%2C len: 121 aa%3B similar to C-terminal of SCF51A.23C TR:Q9RL41 (EMBL:AL121596) hypothetical protein from Streptomyces coelicolor (431 aa) fasta scores%3B opt: 408%2C Z-score: 470.3%2C E(): 1.4e-18%2C 70.115%25 identity (70.115%25 ungapped) in 87 aa overlap.;gbkey=CDS;gene=SCF51A.24c;product=hypothetical protein;protein_id=NP_624767.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	465510	465514	.	-	.	ID=id445;Dbxref=GeneID:1095869;gbkey=RBS;gene=SCF51A.24c
NC_003888.3	RefSeq	ribosome_entry_site	465869	465874	.	-	.	ID=id446;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	465984	465988	.	+	.	ID=id447;gbkey=RBS
NC_003888.3	RefSeq	gene	465990	466436	.	+	.	ID=gene433;Dbxref=GeneID:1095870;Name=SCF51A.25;gbkey=Gene;gene=SCF51A.25;gene_biotype=protein_coding;gene_synonym=SCF51A.25;locus_tag=SCO0447
NC_003888.3	RefSeq	CDS	465990	466436	.	+	0	ID=cds419;Parent=gene433;Dbxref=Genbank:NP_624768.1,GeneID:1095870;Name=NP_624768.1;Note=SCF51A.25%2C possible MarR-family regulatory protein%2C len: 148 aa. Similar to many hypothetical proteins with similarity to the MarR family of transcriptional regulators e.g. Mycobacterium tuberculosis SW: YZ08_MYCTU (EMBL%3B Z73101) hypothetical 15.6 KD protein CY31.08 (143 aa)%2C fasta scores opt: 256 z-score: 328.8 E(): 5.9e-11 34.1%25 identity in 135 aa overlap. Contains a Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SCF51A.25;product=MarR family regulatory protein;protein_id=NP_624768.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	466101	466415	.	+	.	ID=id448;Dbxref=GeneID:1095870;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 95.90%2C E-value 8.2e-25;gbkey=misc_feature;gene=SCF51A.25
NC_003888.3	RefSeq	gene	466504	467909	.	+	.	ID=gene434;Dbxref=GeneID:1095871;Name=SCF51A.26;gbkey=Gene;gene=SCF51A.26;gene_biotype=pseudogene;gene_synonym=SCF51A.26;locus_tag=SCO0448;pseudo=true
NC_003888.3	RefSeq	sequence_feature	466504	467909	.	+	.	ID=id449;Dbxref=GeneID:1095871;Note=SCF51A.26%2C transmembrane efflux protein pseudogene%2C len: 86 aa. Similar to Streptomyces coelicolor TR:CAB42035 (EMBL%3B AL049754) transmembrane efflux protein (484 aa). Sequence contains a likely frame shift%2C within a well sequenced region%2C between bases 26483..26492.%3Btransmembrane efflux protein (pseudogene);gbkey=misc_feature;gene=SCF51A.26
NC_003888.3	RefSeq	gene	468153	469232	.	+	.	ID=gene435;Dbxref=GeneID:1095872;Name=SCF51A.27;gbkey=Gene;gene=SCF51A.27;gene_biotype=protein_coding;gene_synonym=SCF51A.27;locus_tag=SCO0449
NC_003888.3	RefSeq	CDS	468153	469232	.	+	0	ID=cds420;Parent=gene435;Dbxref=Genbank:NP_624769.1,GeneID:1095872;Name=NP_624769.1;Note=SCF51A.27%2C possible  solute-binding lipoprotein %2C len: 359 aa. Weakly similar to many solute-binding proteins e.g. Streptomyces coelicolor TR:O69944 (EMBL%3B AL023862)  solute binding protein SC3F9.04 (348 aa)%2C fasta scores opt: 231 z-score: 259.4 E(): 4.3e-07 23.2%25 identity in 366 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to%2C PS00013%2C a prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCF51A.27;product=solute-binding lipoprotein;protein_id=NP_624769.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	468198	468230	.	+	.	ID=id450;Dbxref=GeneID:1095872;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF51A.27
NC_003888.3	RefSeq	gene	469315	470304	.	-	.	ID=gene436;Dbxref=GeneID:1095873;Name=SCF51A.28c;gbkey=Gene;gene=SCF51A.28c;gene_biotype=protein_coding;gene_synonym=SCF51A.28c;locus_tag=SCO0450
NC_003888.3	RefSeq	CDS	469315	470304	.	-	0	ID=cds421;Parent=gene436;Dbxref=Genbank:NP_624770.1,GeneID:1095873;Name=NP_624770.1;Note=SCF51A.28c%2C possible integral membrane protein%2C len: 326 aa. Weakly similar to a number of sensory transduction histidine kinases e.g. Synechocystis sp. (strain PCC 6803) TR:P72791 (EMBL%3B D90900) (834 aa)%2C fasta scores opt: 172 z-score: 187.7 E(): 0.0042 23.7%25 identity in 317 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF51A.28c;product=hypothetical protein;protein_id=NP_624770.1;transl_table=11
NC_003888.3	RefSeq	gene	470355	471209	.	-	.	ID=gene437;Dbxref=GeneID:1095874;Name=SCF51A.29c;gbkey=Gene;gene=SCF51A.29c;gene_biotype=protein_coding;gene_synonym=SCF51A.29c;locus_tag=SCO0451
NC_003888.3	RefSeq	CDS	470355	471209	.	-	0	ID=cds422;Parent=gene437;Dbxref=Genbank:NP_624771.1,GeneID:1095874;Name=NP_624771.1;Note=SCF51A.29c%2C unknown%2C len: 284 aa. Similar to the C-terminus of many hypothetical proteins e.g. Mycobacterium tuberculosis SW:Y07S_MYCTU (EMBL%3B Z75555) hypothetical 69.5 KD protein CY02B10.28C (653 aa)%2C fasta scores opt: 390 z-score: 451.1 E(): 9.1e-18 33.5%25 identity in 263 aa overlap. In addition to Bacillus subtilis SW:RSBU_BACSU (EMBL%3B L35574) sigma factor SibG regulation protein RsbU (335 aa)%2C fasta scores opt: 206 z-score: 243.6 E(): 3.3e-06 24.3%25 identity in 185 aa overlap.;gbkey=CDS;gene=SCF51A.29c;product=hypothetical protein;protein_id=NP_624771.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	471216	471219	.	-	.	ID=id451;gbkey=RBS
NC_003888.3	RefSeq	gene	471415	472314	.	+	.	ID=gene438;Dbxref=GeneID:1095875;Name=SCF51A.30;gbkey=Gene;gene=SCF51A.30;gene_biotype=protein_coding;gene_synonym=SCF51A.30;locus_tag=SCO0452
NC_003888.3	RefSeq	CDS	471415	472314	.	+	0	ID=cds423;Parent=gene438;Dbxref=Genbank:NP_624772.1,GeneID:1095875;Name=NP_624772.1;Note=SCF51A.30%2C possible SIR2-like regulatory protein%2C len: 299 aa. Similar to several Eukaryotic proteins e.g. Homo sapiens TR:AAD40852 (EMBL%3B AF083109) sirtuin type 4 (314 aa)%2C fasta scores opt: 736 z-score: 829.3 E(): 0 46.3%25 identity in 255 aa overlap. Also similar to several Prokaryotic proteins e.g. Archaeoglobus fulgidus TR:O30124 (EMBL%3B AE001098) transcriptional regulatory protein%2C SIR2 family (253 aa)%2C fasta scores opt: 319 z-score: 364.7 E(): 5.9e-13 31.9%25 identity in 257 aa overlap.;gbkey=CDS;gene=SCF51A.30;product=SIR2-like regulatory protein;protein_id=NP_624772.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	472445	472448	.	+	.	ID=id452;gbkey=RBS
NC_003888.3	RefSeq	gene	472458	473747	.	+	.	ID=gene439;Dbxref=GeneID:1095876;Name=SCF51A.31;gbkey=Gene;gene=SCF51A.31;gene_biotype=protein_coding;gene_synonym=SCF51A.31;locus_tag=SCO0453
NC_003888.3	RefSeq	CDS	472458	473747	.	+	0	ID=cds424;Parent=gene439;Dbxref=Genbank:NP_624773.1,GeneID:1095876;Name=NP_624773.1;Note=SCF51A.31%2C probable  solute-binding lipoprotein%2C len: 429 aa. Weakly similar to many solute-binding proteins e.g. Bacillus subtilis SW:YURO_BACSU (EMBL%3B Z99120) hypothetical ABC transporter extracellular binding protein YurO (422 aa)%2C fasta scores opt: 235 z-score: 270.1 E(): 1.1e-07 19.9%25 identity in 422 aa overlap. Contains a Pfam match to entry PF01547 SBP_bacterial_1%2C an appropriately positioned Prosite hit to PS00013%2C a prokaryotic membrane lipoprotein lipid attachment site and also contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF51A.31;product=solute-binding lipoprotein;protein_id=NP_624773.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	472512	472544	.	+	.	ID=id453;Dbxref=GeneID:1095876;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF51A.31
NC_003888.3	RefSeq	sequence_feature	472890	473729	.	+	.	ID=id454;Dbxref=GeneID:1095876;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C %2C score 33.50%2C E-value 4.7e-06;gbkey=misc_feature;gene=SCF51A.31
NC_003888.3	RefSeq	ribosome_entry_site	473837	473840	.	+	.	ID=id455;gbkey=RBS
NC_003888.3	RefSeq	gene	473848	474789	.	+	.	ID=gene440;Dbxref=GeneID:1095877;Name=SCF51A.32;gbkey=Gene;gene=SCF51A.32;gene_biotype=protein_coding;gene_synonym=SCF51A.32;locus_tag=SCO0454
NC_003888.3	RefSeq	CDS	473848	474789	.	+	0	ID=cds425;Parent=gene440;Dbxref=Genbank:NP_624774.1,GeneID:1095877;Name=NP_624774.1;Note=SCF51A.32%2C probable binding-protein dependent transport protein%2C len: 313 aa. Similar to many including: Streptomyces coelicolor TR:CAB41203 (EMBL%3B AL049661) protein SCE134.05C (327 aa)%2C fasta scores opt: 479 z-score: 546.7 E(): 4.3e-23 31.4%25 identity in 315 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and a Prosite hit to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF51A.32;product=binding-protein dependent transport protein;protein_id=NP_624774.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	474448	474684	.	+	.	ID=id456;Dbxref=GeneID:1095877;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 40.90%2C E-value 2.8e-08;gbkey=misc_feature;gene=SCF51A.32
NC_003888.3	RefSeq	sequence_feature	474451	474537	.	+	.	ID=id457;Dbxref=GeneID:1095877;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF51A.32
NC_003888.3	RefSeq	gene	474804	475631	.	+	.	ID=gene441;Dbxref=GeneID:1095878;Name=SCF51A.33;gbkey=Gene;gene=SCF51A.33;gene_biotype=protein_coding;gene_synonym=SCF51A.33;locus_tag=SCO0455
NC_003888.3	RefSeq	CDS	474804	475631	.	+	0	ID=cds426;Parent=gene441;Dbxref=Genbank:NP_624775.1,GeneID:1095878;Name=NP_624775.1;Note=SCF51A.33%2C binding-protein dependent transport protein%2C len: 274 aa. Similar to many e.g. Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides) TR:O30833 (EMBL%3B AF018073) sorbitol/mannitol transport inner membrane protein (276 aa)%2C fasta scores opt: 452 z-score: 556.9 E(): 1.2e-23 32.0%25 identity in 272 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF51A.33;product=binding-protein dependent transport protein;protein_id=NP_624775.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	475275	475502	.	+	.	ID=id458;Dbxref=GeneID:1095878;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 49.80%2C E-value 6e-11;gbkey=misc_feature;gene=SCF51A.33
NC_003888.3	RefSeq	gene	475628	476671	.	+	.	ID=gene442;Dbxref=GeneID:1095879;Name=SCF51A.34;gbkey=Gene;gene=SCF51A.34;gene_biotype=protein_coding;gene_synonym=SCF51A.34;locus_tag=SCO0456
NC_003888.3	RefSeq	CDS	475628	476671	.	+	0	ID=cds427;Parent=gene442;Dbxref=Genbank:NP_624776.1,GeneID:1095879;Name=NP_624776.1;Note=SCF51A.34%2C possible LacI family transcriptional regulator%2C len: 347 aa. Highly similar to several including: Escherichia coli SW:CYTR_ECOLI (EMBL%3B X03683) transcriptional repressor CytR (341 aa)%2C fasta scores opt: 504 z-score: 574.2 E(): 1.3e-24 31.6%25 identity in 339 aa overlap and Streptomyces coelicolor TR:O86598 (EMBL%3B AL031514)  transcriptional regulator SC2H4.15 (342 aa)%2C fasta scores opt: 807 z-score: 915.3 E(): 0 44.4%25 identity in 333 aa overlap. Contains a Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C a Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and a possible helix-turn-helix motif between residues 13..34 (+5.95 SD).;gbkey=CDS;gene=SCF51A.34;product=LacI family transcriptional regulator;protein_id=NP_624776.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	475655	475738	.	+	.	ID=id459;Dbxref=GeneID:1095879;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 34.10%2C E-value 3.9e-08;gbkey=misc_feature;gene=SCF51A.34
NC_003888.3	RefSeq	sequence_feature	475829	476566	.	+	.	ID=id460;Dbxref=GeneID:1095879;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 85.50%2C E-value 1.1e-21;gbkey=misc_feature;gene=SCF51A.34
NC_003888.3	RefSeq	ribosome_entry_site	476731	476735	.	+	.	ID=id461;gbkey=RBS
NC_003888.3	RefSeq	gene	476738	478672	.	+	.	ID=gene443;Dbxref=GeneID:1095880;Name=SCF51A.35;gbkey=Gene;gene=SCF51A.35;gene_biotype=protein_coding;gene_synonym=SCF51A.35;locus_tag=SCO0457
NC_003888.3	RefSeq	CDS	476738	478672	.	+	0	ID=cds428;Parent=gene443;Dbxref=Genbank:NP_624777.1,GeneID:1095880;Name=NP_624777.1;Note=SCF51A.35%2C unknown%2C len: 644 aa;gbkey=CDS;gene=SCF51A.35;product=hypothetical protein;protein_id=NP_624777.1;transl_table=11
NC_003888.3	RefSeq	gene	478669	480957	.	+	.	ID=gene444;Dbxref=GeneID:1095881;Name=SCF51A.36;gbkey=Gene;gene=SCF51A.36;gene_biotype=protein_coding;gene_synonym=SCF51A.36;locus_tag=SCO0458
NC_003888.3	RefSeq	CDS	478669	480957	.	+	0	ID=cds429;Parent=gene444;Dbxref=Genbank:NP_624778.1,GeneID:1095881;Name=NP_624778.1;Note=SCF51A.36%2C probable Beta-glucosidase (EC 3.2.1.21)%2C len: 762 aa. Highly similar to many e.g. Escherichia coli SW:BGLX_ECOLI (EMBL%3B U15049) periplasmic Beta-glucosidase precursor (EC 3.2.1.21) (765 aa)%2C fasta scores opt: 851 z-score: 896.9 E(): 0 32.2%25 identity in 773 aa overlap. Contains 2x Pfam matches to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3.;gbkey=CDS;gene=SCF51A.36;product=Beta-glucosidase;protein_id=NP_624778.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	478981	480045	.	+	.	ID=id462;Dbxref=GeneID:1095881;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3%2C score 274.20%2C E-value 6.7e-83;gbkey=misc_feature;gene=SCF51A.36
NC_003888.3	RefSeq	sequence_feature	480214	480906	.	+	.	ID=id463;Dbxref=GeneID:1095881;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3%2C score 199.10%2C E-value 4.5e-60;gbkey=misc_feature;gene=SCF51A.36
NC_003888.3	RefSeq	gene	481012	481791	.	+	.	ID=gene445;Dbxref=GeneID:1095882;Name=SCF51A.37;gbkey=Gene;gene=SCF51A.37;gene_biotype=protein_coding;gene_synonym=SCF51A.37;locus_tag=SCO0459
NC_003888.3	RefSeq	CDS	481012	481791	.	+	0	ID=cds430;Parent=gene445;Dbxref=Genbank:NP_624779.1,GeneID:1095882;Name=NP_624779.1;Note=SCF51A.37%2C unknown%2C len: 259 aa. Similar to Mycobacterium tuberculosis SW:YX26_MYCTU (EMBL%3B Z74024) hypothetical 30.6 KD protein CY274.26C (283 aa)%2C fasta scores opt: 268 z-score: 318.2 E(): 2.3e-10 28.9%25 identity in 263 aa overlap.;gbkey=CDS;gene=SCF51A.37;product=hypothetical protein;protein_id=NP_624779.1;transl_table=11
NC_003888.3	RefSeq	gene	481810	482319	.	-	.	ID=gene446;Dbxref=GeneID:1095883;Name=SCF51A.38;gbkey=Gene;gene=SCF51A.38;gene_biotype=protein_coding;gene_synonym=SCF51A.38;locus_tag=SCO0460
NC_003888.3	RefSeq	CDS	481810	482319	.	-	0	ID=cds431;Parent=gene446;Dbxref=Genbank:NP_624780.1,GeneID:1095883;Name=NP_624780.1;Note=SCF51A.38%2C unknown%2C len: 169 aa.;gbkey=CDS;gene=SCF51A.38;product=hypothetical protein;protein_id=NP_624780.1;transl_table=11
NC_003888.3	RefSeq	gene	482456	483325	.	+	.	ID=gene447;Dbxref=GeneID:1095884;Name=SCF51A.39;gbkey=Gene;gene=SCF51A.39;gene_biotype=protein_coding;gene_synonym=SCF51A.39,SCF76.01;locus_tag=SCO0461
NC_003888.3	RefSeq	CDS	482456	483325	.	+	0	ID=cds432;Parent=gene447;Dbxref=Genbank:NP_733502.1,GeneID:1095884;Name=NP_733502.1;Note=SCF76.01%2C possible hydrolase%2C partial CDS%2C len: >228 aa. Similar to several hypothetical proteins e.g. from Saccharomyces cerevisiae SW:YN93_YEAST (EMBLL:Z71679) (290 aa)%2C fasta scores opt: 609 z-score: 749.0 E():0 42.4%25 identity in 229 aa overlap. Also weakly similar to Xanthobacter autotrophicus SW:HALO_XANAU (EMBL:M26950) haloalkane dehalogenase (EC 3.8.1.5) (310 aa)%2C fasta scores opt: 151 z-score: 190.4 E():0.003 22.9%25 identity in 231 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold~SCF51A.39%2C possible hydrolase%2C partial CDS%2C len: >113 aa. Highly similar to Saccharomyces cerevisiae (Bakers yeast) SW:YN93_YEAST (EMBL%3B Z71679) hypothetical 32.8 KD protein in BIO3-HXT17 intergenic region. In addition to being similar to many dehalogenases e.g. Mycobacterium tuberculosis SW:YU14_MYCTU (EMBL%3B Z77163) haloalkane dehalogenase (EC 3.8.1.5) (300 aa)%2C fasta scores opt: 222 z-score: 292.5 E(): 6.2e-09 37.0%25 identity in 100 aa overlap;gbkey=CDS;gene=SCF51A.39;product=hydrolase;protein_id=NP_733502.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	482639	483307	.	+	.	ID=id464;Dbxref=GeneID:1095884;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 56.90%2C E-value 4.4e-13;gbkey=misc_feature;gene=SCF51A.39
NC_003888.3	RefSeq	gene	483338	484267	.	-	.	ID=gene448;Dbxref=GeneID:1095885;Name=SCF76.02c;gbkey=Gene;gene=SCF76.02c;gene_biotype=protein_coding;gene_synonym=SCF76.02c;locus_tag=SCO0462
NC_003888.3	RefSeq	CDS	483338	484267	.	-	0	ID=cds433;Parent=gene448;Dbxref=Genbank:NP_624781.1,GeneID:1095885;Name=NP_624781.1;Note=SCF76.02c%2C possible oxidoreductase%2C len: 305 aa. Similar to many hypothetical proteins e.g. Pyrococcus horikoshii SW:APBA_PYRHO (EMBL%3B AP000006) probable 2-dehydropantoate 2-reductase (EC 1.1.1.169) (ketopantoate reductase) (KPA reductase) (301 aa)%2C fasta scores opt: 359 z-score: 419.9 E(): 4.9e-16 26.5%25 identity in 291 aa overlap and Streptomyces coelicolor TR:Q9ZBV6 (EMBL:AL034443) oxidoreductase SC4B5.12C (323 aa)%2C fasta scores opt: 233 z-score: 274.7 E(): 6.1e-08 32.0%25 identity in 322 aa overlap.;gbkey=CDS;gene=SCF76.02c;product=oxidoreductase;protein_id=NP_624781.1;transl_table=11
NC_003888.3	RefSeq	gene	484318	484932	.	+	.	ID=gene449;Dbxref=GeneID:1095886;Name=SCF76.03;gbkey=Gene;gene=SCF76.03;gene_biotype=protein_coding;gene_synonym=SCF76.03;locus_tag=SCO0463
NC_003888.3	RefSeq	CDS	484318	484932	.	+	0	ID=cds434;Parent=gene449;Dbxref=Genbank:NP_624782.1,GeneID:1095886;Name=NP_624782.1;Note=SCF76.03%2C unknown%2C len: 204 aa%3B similar to TR:Q9L1U0 (EMBL:AL138851) SCE59.14C hypothetical protein from Streptomyces coelicolor (196 aa) fasta scores%3B opt: 357%2C Z-score: 418.9%2C E(): 1.1e-15%2C 37.433%25 identity (40.230%25 ungapped) in 187 aa overlap.;gbkey=CDS;gene=SCF76.03;product=hypothetical protein;protein_id=NP_624782.1;transl_table=11
NC_003888.3	RefSeq	gene	484973	486670	.	-	.	ID=gene450;Dbxref=GeneID:1095887;Name=SCF76.04c;gbkey=Gene;gene=SCF76.04c;gene_biotype=protein_coding;gene_synonym=SCF76.04c;locus_tag=SCO0464
NC_003888.3	RefSeq	CDS	484973	486670	.	-	0	ID=cds435;Parent=gene450;Dbxref=Genbank:NP_624783.1,GeneID:1095887;Name=NP_624783.1;Note=SCF76.04c%2C possible integral membrane protein%2C len: 565 aa. Similar in parts to many hypothetical proteins e.g. Streptomyces lividans TR:O86875 (EMBL%3B U22894) hypothetical 57.9 KD protein (547 aa)%2C fasta scores opt: 689 z-score: 806.6 E(): 0 41.7%25 identity in 439 aa overlap and Streptomyces coelicolor TR:O86807 (EMBL%3B AL031031) regulatory protein (916 aa)%2C fasta scores opt: 329 z-score: 381.2 E(): 7.1e-14 26.5%25 identity in 582 aa overlap. Contains a Pfam match to entry PF01590 GAF%2C GAF domain and possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF76.04c;product=hypothetical protein;protein_id=NP_624783.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	485714	486388	.	-	.	ID=id465;Dbxref=GeneID:1095887;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 38.80%2C E-value 1.3e-07;gbkey=misc_feature;gene=SCF76.04c
NC_003888.3	RefSeq	gene	486684	487514	.	-	.	ID=gene451;Dbxref=GeneID:1095888;Name=SCF76.05c;gbkey=Gene;gene=SCF76.05c;gene_biotype=protein_coding;gene_synonym=SCF76.05c;locus_tag=SCO0465
NC_003888.3	RefSeq	CDS	486684	487514	.	-	0	ID=cds436;Parent=gene451;Dbxref=Genbank:NP_624784.1,GeneID:1095888;Name=NP_624784.1;Note=SCF76.05c%2C non-heme chloroperoxidase (chloride peroxidase)%2C len: 276 aa. Identical to Streptomyces lividans SW:PRXC_STRLI (EMBL%3B U02635) non-heme chloroperoxidase (EC 1.11.1.10) (chloride peroxidase)(CPO-L) (chloroperoxidase L) (275 aa)%2C fasta scores opt: 1866 z-score: 2162.6 E():0 99.3%25 identity in 275 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SCF76.05c;product=non-heme chloroperoxidase;protein_id=NP_624784.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	486693	487367	.	-	.	ID=id466;Dbxref=GeneID:1095888;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 124.80%2C E-value 1.6e-33;gbkey=misc_feature;gene=SCF76.05c
NC_003888.3	RefSeq	gene	487618	488601	.	+	.	ID=gene452;Dbxref=GeneID:1095889;Name=SCF76.06;gbkey=Gene;gene=SCF76.06;gene_biotype=protein_coding;gene_synonym=SCF76.06;locus_tag=SCO0466
NC_003888.3	RefSeq	CDS	487618	488601	.	+	0	ID=cds437;Parent=gene452;Dbxref=Genbank:NP_624785.1,GeneID:1095889;Name=NP_624785.1;Note=SCF76.06%2C probable araC family transcriptional regulator%2C len: 327 aa. Highly similar to many including the Streptomyces coelicolor hypothetical regulators: TR:CAB40696 (EMBL%3B AL049587) SC5F2A.29 (325 aa)%2C fasta scores opt: 857 z-score: 962.2 E():0 45.8%25 identity in 323 aa overlap and TR:CAB46927 (EMBL%3B AL096822) SCGD3.05 (334 aa)%2C fasta scores opt: 617 z-score: 694.7 E(): 2.4e-31 38.6%25 identity in 332 aa overlap. In addition to Streptomyces lividans SW:YCP1_STRLI (EMBL%3B U02635) hypothetical protein in CPOL 5'region (ORF1) (fragment) (141 aa)%2C fasta scores opt: 908 z-score: 1024.0 E():0 99.3%25 identity in 141 aa overlap. Contains a Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family. There are two possible helix-turn-helix motifs located between residues 237..258 (+3.99 SD) and 301..322 (+2.58 SD). Note that the translational start site may be 'M' residue 6.;gbkey=CDS;gene=SCF76.06;product=AraC family transcription regulator;protein_id=NP_624785.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	488320	488577	.	+	.	ID=id467;Dbxref=GeneID:1095889;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 50.60%2C E-value 3.5e-11;gbkey=misc_feature;gene=SCF76.06
NC_003888.3	RefSeq	gene	488614	489357	.	+	.	ID=gene453;Dbxref=GeneID:1095890;Name=SCF76.07;gbkey=Gene;gene=SCF76.07;gene_biotype=protein_coding;gene_synonym=SCF76.07;locus_tag=SCO0467
NC_003888.3	RefSeq	CDS	488614	489357	.	+	0	ID=cds438;Parent=gene453;Dbxref=Genbank:NP_624786.1,GeneID:1095890;Name=NP_624786.1;Note=SCF76.07%2C unknown%2C len: 247 aa%3B similar to TR:Q98LL0 (EMBL:AP002996) MLR0982 protein from Rhizobium loti (Mesorhizobium loti) (215 aa) fasta scores%3B opt: 410%2C Z-score: 484.9%2C E(): 2.2e-19%2C 33.178%25 identity (33.649%25 ungapped) in 214 aa overlap.;gbkey=CDS;gene=SCF76.07;product=hypothetical protein;protein_id=NP_624786.1;transl_table=11
NC_003888.3	RefSeq	gene	489373	490350	.	-	.	ID=gene454;Dbxref=GeneID:1095891;Name=SCF76.08c;gbkey=Gene;gene=SCF76.08c;gene_biotype=protein_coding;gene_synonym=SCF76.08c;locus_tag=SCO0468
NC_003888.3	RefSeq	CDS	489373	490350	.	-	0	ID=cds439;Parent=gene454;Dbxref=Genbank:NP_624787.1,GeneID:1095891;Name=NP_624787.1;Note=SCF76.08c%2C unknown%2C len: 325 aa. The N-terminus is highly similar to several PIRIN proteins e.g. Alcaligenes eutrophus TR: AAD21775 (EMBL%3B J05278) PIRIN (187 aa)%2C fasta scores opt: 446 z-score: 495.3 E(): 3.1e-20 49.7%25 identity in 149 aa overlap. Also similar to several hypothetical proteins e.g. Mycobacterium tuberculosis TR:O07425 (EMBL%3B Z97050) hypothetical 26.3 KD protein (244 aa)%2C fasta scores opt: 269 z-score: 301.6 E(): 1.9e-09 32.7%25 identity in 217 aa overlap.;gbkey=CDS;gene=SCF76.08c;product=hypothetical protein;protein_id=NP_624787.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	490437	490441	.	+	.	ID=id468;gbkey=RBS
NC_003888.3	RefSeq	gene	490451	490972	.	+	.	ID=gene455;Dbxref=GeneID:1095892;Name=SCF76.09;gbkey=Gene;gene=SCF76.09;gene_biotype=protein_coding;gene_synonym=SCF76.09;locus_tag=SCO0469
NC_003888.3	RefSeq	CDS	490451	490972	.	+	0	ID=cds440;Parent=gene455;Dbxref=Genbank:NP_624788.1,GeneID:1095892;Name=NP_624788.1;Note=SCF76.09%2C unknown%2C len: 173 aa. Weakly similar in parts to Bacillus subtilis TR:P96684 (EMBL%3B AB001488) YDFG protein (147 aa)%2C fasta scores opt: 260 z-score: 329.6 E(): 5.3e-11 35.1%25 identity in 111 aa overlap.;gbkey=CDS;gene=SCF76.09;product=hypothetical protein;protein_id=NP_624788.1;transl_table=11
NC_003888.3	RefSeq	gene	490983	491891	.	+	.	ID=gene456;Dbxref=GeneID:1095893;Name=SCF76.10;gbkey=Gene;gene=SCF76.10;gene_biotype=protein_coding;gene_synonym=SCF76.10;locus_tag=SCO0470
NC_003888.3	RefSeq	CDS	490983	491891	.	+	0	ID=cds441;Parent=gene456;Dbxref=Genbank:NP_624789.1,GeneID:1095893;Name=NP_624789.1;Note=SCF76.10%2C possible hydrolase%2C len: 302 aa. Weakly similar to hydrolases e.g. the N-terminal%2C domain of Streptomyces coelicolor TR:O86608 (EMBL:AL031155) 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (449 aa)%2C fasta scores opt: 387 z-score: 428.9 E(): 1.6e-16 33.7%25 identity in 258 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SCF76.10;product=hydrolase;protein_id=NP_624789.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	491199	491849	.	+	.	ID=id469;Dbxref=GeneID:1095893;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 77.30%2C E-value 3.1e-19;gbkey=misc_feature;gene=SCF76.10
NC_003888.3	RefSeq	gene	491901	492881	.	+	.	ID=gene457;Dbxref=GeneID:1095894;Name=SCF76.11;gbkey=Gene;gene=SCF76.11;gene_biotype=protein_coding;gene_synonym=SCF76.11;locus_tag=SCO0471
NC_003888.3	RefSeq	CDS	491901	492881	.	+	0	ID=cds442;Parent=gene457;Dbxref=Genbank:NP_624790.1,GeneID:1095894;Name=NP_624790.1;Note=SCF76.11%2C possible araC family transcriptional regulator%2C len: 326 aa. Weakly similar to the DNA-binding domains of other transcriptional regulators e.g. Escherichia coli SW:ARAC_ECOLI (EMBL%3B V00256) arabinose operon regulatory protein (292 aa)%2C fasta scores opt: 130 z-score: 151.4 E(): 0.45 28.2%25 identity in 163 aa overlap. Contains a Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family. The helix-turn-helix motif is located between residues 197..218 (+2.74 SD). Also contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCF76.11;product=AraC family transcription regulator;protein_id=NP_624790.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	492483	492740	.	+	.	ID=id470;Dbxref=GeneID:1095894;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 46.50%2C E-value 5.7e-10;gbkey=misc_feature;gene=SCF76.11
NC_003888.3	RefSeq	gene	493055	494263	.	-	.	ID=gene458;Dbxref=GeneID:1095895;Name=SCF76.12c;gbkey=Gene;gene=SCF76.12c;gene_biotype=protein_coding;gene_synonym=SCF76.12c;locus_tag=SCO0472
NC_003888.3	RefSeq	CDS	493055	494263	.	-	0	ID=cds443;Parent=gene458;Dbxref=Genbank:NP_624791.1,GeneID:1095895;Name=NP_624791.1;Note=SCF76.12c%2C possible hypothetical protein%2C len: 384 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF76.12c;product=hypothetical protein;protein_id=NP_624791.1;transl_table=11
NC_003888.3	RefSeq	gene	494260	495249	.	-	.	ID=gene459;Dbxref=GeneID:1095896;Name=SCF76.13c;gbkey=Gene;gene=SCF76.13c;gene_biotype=protein_coding;gene_synonym=SCF76.13c;locus_tag=SCO0473
NC_003888.3	RefSeq	CDS	494260	495249	.	-	0	ID=cds444;Parent=gene459;Dbxref=Genbank:NP_624792.1,GeneID:1095896;Name=NP_624792.1;Note=SCF76.13c%2C possible solute-binding lipoprotein%2C len: 329 aa. Similar to many e.g. Streptococcus parasanguis SW:ADHS_STRPA (EMBL%3B M26130) adhesin B precursor (saliva-binding protein) (309 aa)%2C fasta scores opt: 354 z-score: 399.1 E(): 7.2e-15 23.7%25 identity in 317 aa overlap. Contains an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site%2C a Pfam match to entry PF01297 Lipoprotein_4%2C Adhesion lipoprotein and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF76.13c;product=solute-binding lipoprotein;protein_id=NP_624792.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	494272	494277	.	-	.	ID=id471;Dbxref=GeneID:1095896;gbkey=RBS;gene=SCF76.13c
NC_003888.3	RefSeq	sequence_feature	494290	495189	.	-	.	ID=id472;Dbxref=GeneID:1095896;Note=Pfam match to entry PF01297 Lipoprotein_4%2C Adhesion lipoprotein%2C score 134.20%2C E-value 2.4e-36;gbkey=misc_feature;gene=SCF76.13c
NC_003888.3	RefSeq	sequence_feature	495151	495183	.	-	.	ID=id473;Dbxref=GeneID:1095896;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF76.13c
NC_003888.3	RefSeq	gene	495246	496493	.	-	.	ID=gene460;Dbxref=GeneID:1095897;Name=SCF76.14c;gbkey=Gene;gene=SCF76.14c;gene_biotype=protein_coding;gene_synonym=SCF76.14c;locus_tag=SCO0474
NC_003888.3	RefSeq	CDS	495246	496493	.	-	0	ID=cds445;Parent=gene460;Dbxref=Genbank:NP_624793.1,GeneID:1095897;Name=NP_624793.1;Note=SCF76.14c%2C possible lipoprotein%2C len: 415 aa. Contains an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF76.14c;product=lipoprotein;protein_id=NP_624793.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	496410	496442	.	-	.	ID=id474;Dbxref=GeneID:1095897;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF76.14c
NC_003888.3	RefSeq	gene	496508	497359	.	-	.	ID=gene461;Dbxref=GeneID:1095898;Name=SCF76.15c;gbkey=Gene;gene=SCF76.15c;gene_biotype=protein_coding;gene_synonym=SCF76.15c;locus_tag=SCO0475
NC_003888.3	RefSeq	CDS	496508	497359	.	-	0	ID=cds446;Parent=gene461;Dbxref=Genbank:NP_624794.1,GeneID:1095898;Name=NP_624794.1;Note=SCF76.15c%2C probable ABC transporter%2C integral membrane subunit%2C len: 283 aa. Similar to many e.g. Escherichia coli SW:ZNUB_ECOLI (EMBL%3B AE000280) high-affinity zinc uptake system membrane protein ZnuB (261 aa)%2C fasta scores opt: 442 z-score: 483.2 E(): 1.5e-19 32.5%25 identity in 246 aa overlap. Contains a Pfam match to entry PF00950 ABC-3%2C ABC 3 transport family and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF76.15c;product=ABC transporter;protein_id=NP_624794.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	496562	497335	.	-	.	ID=id475;Dbxref=GeneID:1095898;Note=Pfam match to entry PF00950 ABC-3%2C ABC 3 transport family%2C score 238.20%2C E-value 1.2e-67;gbkey=misc_feature;gene=SCF76.15c
NC_003888.3	RefSeq	ribosome_entry_site	497362	497366	.	+	.	ID=id476;gbkey=RBS
NC_003888.3	RefSeq	gene	497375	498133	.	+	.	ID=gene462;Dbxref=GeneID:1095899;Name=SCF76.16;gbkey=Gene;gene=SCF76.16;gene_biotype=protein_coding;gene_synonym=SCF76.16;locus_tag=SCO0476
NC_003888.3	RefSeq	CDS	497375	498133	.	+	0	ID=cds447;Parent=gene462;Dbxref=Genbank:NP_624795.1,GeneID:1095899;Name=NP_624795.1;Note=SCF76.16%2C ABC transporter%2C ATP-binding subunit%2C len: 252 aa. Similar to many e.g. Haemophilus influenzae SW:FECE_HAEIN (EMBL%3B U32720) iron(III) dicitrate transport ATP-binding protein FecE homolog (306 aa)%2C fasta scores opt: 375 z-score: 413.4 E(): 1.2e-15 37.3%25 identity in 185 aa overlap. Contains a Prosite hit to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCF76.16;product=ABC transporter ATP-binding protein;protein_id=NP_624795.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	497534	497557	.	+	.	ID=id477;Dbxref=GeneID:1095899;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF76.16
NC_003888.3	RefSeq	sequence_feature	497819	497863	.	+	.	ID=id478;Dbxref=GeneID:1095899;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF76.16
NC_003888.3	RefSeq	ribosome_entry_site	498226	498229	.	+	.	ID=id479;gbkey=RBS
NC_003888.3	RefSeq	gene	498238	498630	.	+	.	ID=gene463;Dbxref=GeneID:1095900;Name=SCF76.17;gbkey=Gene;gene=SCF76.17;gene_biotype=protein_coding;gene_synonym=SCF76.17;locus_tag=SCO0477
NC_003888.3	RefSeq	CDS	498238	498630	.	+	0	ID=cds448;Parent=gene463;Dbxref=Genbank:NP_624796.1,GeneID:1095900;Name=NP_624796.1;Note=SCF76.17%2C conserved hypothetical protein%2C len: 130 aa. Highly similar to several including: Bacillus subtilis TR:O32161 (EMBL%3B Z99120) YurT protein (127 aa)%2C fasta scores opt: 494 z-score: 605.8 E(): 2.2e-26 58.6%25 identity in 128 aa overlap%2C Streptomyces coelicolor TR:CAB42950 (EMBL%3B AL049863) hypothetical 14.4 KD protein SC5H1.25C (131 aa)%2C fasta scores opt: 221 z-score: 280.0 E(): 3.1e-08 37.2%25 identity in 129 aa overlap and also weakly similar to some lyases e.g. Salmonella typhimurium SW:LGUL_SALTY (EMBL%3B U57364) lactoylglutathione lyase (EC 4.4.1.5) (135 aa)%2C fasta scores opt: 101 z-score: 136.7 E(): 2.9 23.1%25 identity in 134 aa overlap;gbkey=CDS;gene=SCF76.17;product=hypothetical protein;protein_id=NP_624796.1;transl_table=11
NC_003888.3	RefSeq	gene	498683	499807	.	-	.	ID=gene464;Dbxref=GeneID:1095901;Name=SCF76.18c;gbkey=Gene;gene=SCF76.18c;gene_biotype=protein_coding;gene_synonym=SCF76.18c;locus_tag=SCO0478
NC_003888.3	RefSeq	CDS	498683	499807	.	-	0	ID=cds449;Parent=gene464;Dbxref=Genbank:NP_624797.1,GeneID:1095901;Name=NP_624797.1;Note=SCF76.18c%2C possible membrane protein%2C len: 374 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCF76.18c;product=hypothetical protein;protein_id=NP_624797.1;transl_table=11
NC_003888.3	RefSeq	gene	499952	500776	.	-	.	ID=gene465;Dbxref=GeneID:1095902;Name=SCF76.19c;gbkey=Gene;gene=SCF76.19c;gene_biotype=protein_coding;gene_synonym=SCF76.19c;locus_tag=SCO0479
NC_003888.3	RefSeq	CDS	499952	500776	.	-	0	ID=cds450;Parent=gene465;Dbxref=Genbank:NP_624798.1,GeneID:1095902;Name=NP_624798.1;Note=SCF76.19c%2C phosphatase%2C len: 274 aa. Almost identical to Streptomyces lividans TR:O70034 (EMBL%3B AJ223365) Sbl1 gene (274 aa)%2C fasta scores opt: 1764 z-score: 2005.4 E():0 97.1%25 identity in 274 aa overlap. Also weakly similar to many inositol monophosphatases e.g. Mycobacterium smegmatis TR:O51845 (EMBL%3B AF005905) inositol monophosphate phosphatase (276 aa)%2C fasta scores opt: 299 z-score: 346.7 E(): 6e-12 33.1%25 identity in 269 aa overlap and Escherichia coli SW: SUHB_ECOLI (EMBL%3B M34828) extragenic suppressor protein SuhB (267 aa)%2C fasta scores opt: 269 z-score: 313.0 E(): 4.6e-10 30.8%25 identity in 263 aa overlap.;gbkey=CDS;gene=SCF76.19c;product=phosphatase;protein_id=NP_624798.1;transl_table=11
NC_003888.3	RefSeq	gene	500780	501412	.	+	.	ID=gene466;Dbxref=GeneID:1095903;Name=SCF76.20;gbkey=Gene;gene=SCF76.20;gene_biotype=protein_coding;gene_synonym=SCF76.20,SCF80.01;locus_tag=SCO0480
NC_003888.3	RefSeq	CDS	500780	501412	.	+	0	ID=cds451;Parent=gene466;Dbxref=Genbank:NP_733503.1,GeneID:1095903;Name=NP_733503.1;Note=SCF80.01%2C unknown%2C partial CDS%2C len: >193 aa. Similar in parts to Streptomyces coelicolor TR:CAB53333 (EMBL%3BAL109974) hypothetical 34.2 KD protein SCF34.22 (326 aa)%2C fasta scores opt:opt: 296 z-score: 300.2 E(): 2.4e-09 40.5%25 identity in 148 aa overlap.~SCF76.20%2C unknown%2C partial CDS%2C len: >49 aa.;gbkey=CDS;gene=SCF76.20;product=hypothetical protein;protein_id=NP_733503.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	500825	500877	.	+	.	ID=id480;Dbxref=GeneID:1095903;Note=degenerate repeat region with 3x CCTCCCGA%2C 2x CCTCCCGG%2C 1x CCTCCGG.;gbkey=repeat_region;gene=SCF76.20
NC_003888.3	RefSeq	sequence_feature	501356	502904	.	+	.	ID=id481;Note=99%25 identical to Streptomyces coelicolor EMBL:AB017013.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	501688	501693	.	+	.	ID=id482;gbkey=RBS
NC_003888.3	RefSeq	gene	501699	502217	.	+	.	ID=gene467;Dbxref=GeneID:1095904;Name=SCF80.02;gbkey=Gene;gene=SCF80.02;gene_biotype=protein_coding;gene_synonym=SCF80.02;locus_tag=SCO0481
NC_003888.3	RefSeq	CDS	501699	502217	.	+	0	ID=cds452;Parent=gene467;Dbxref=Genbank:NP_624799.1,GeneID:1095904;Name=NP_624799.1;Note=SCF80.02%2C possible  chitin binding protein%2C len: 172 aa. This CDS has been previously sequenced but was unclassified: Streptomyces coelicolor TR:Q9Z9M5 (EMBL%3B AB017013) gene for ChiG%2C partial CDS (fragment) (172 aa)%2C fasta scores opt: 1151 z-score: 1339.7 E():0 99.4%25 identity in 172 aa overlap. This CDS is similar to several e.g. Streptomyces reticuli TR:O87962 (EMBL%3B Y14315) chitin binding protein (Chb2) (201 aa)%2C fasta scores opt: 193 z-score: 234.7 E(): 1e-05 37.3%25 identity in 201 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF80.02;product=chitin binding protein;protein_id=NP_624799.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	502329	502333	.	+	.	ID=id483;gbkey=RBS
NC_003888.3	RefSeq	gene	502342	503076	.	+	.	ID=gene468;Dbxref=GeneID:1095905;Name=chiG;gbkey=Gene;gene=chiG;gene_biotype=protein_coding;gene_synonym=chiG,SCF34.01;locus_tag=SCO0482
NC_003888.3	RefSeq	CDS	502342	503076	.	+	0	ID=cds453;Parent=gene468;Dbxref=Genbank:NP_733504.1,GeneID:1095905;Name=NP_733504.1;Note=SCF80.03%2C  chitinase%2C partial CDS%2C len:> 187 aa. Previously sequenced and characterised. Streptomyces coelicolor TR:Q9Z9M4 (EMBL%3B AB017013) chiG (fragment) (244 aa)%2C fasta scores opt: 1238 z-score: 1463.2 E():0 98.9%25 identity in 187 aa overlap. Contains a possible N-terminal signal sequence and a Pfam match to entry PF00182 Glyco_hydro_19%2C Chitinases class I.~SCF34.01%2C chiG%2C chitinase%2C partial CDS%2C len: >90 aa%3B identical to the C-terminus of TR:Q9Z9M4 (EMBL:AB017013)%2C chiG%2C Streptomyces coelicolor chitinase (fragment) (244 aa)%2C fasta scores%3B opt: 638 z-score: 812.8 E(): 0%2C 100.0%25 identity in 90 aa overlap. Highly similar to SC5H1.29c (EMBL:AL049863)%2C chiF%2C Streptomyces coelicolor chitinase (296 aa) (81.1%25 identity in 90 aa overlap). Contains Pfam match to entry PF00182 Glyco_hydro_19%2C Chitinases class I;gbkey=CDS;gene=chiG;product=chitinase;protein_id=NP_733504.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	502465	502875	.	+	.	ID=id484;Dbxref=GeneID:1095905;Note=Pfam match to entry PF00182 Glyco_hydro_19%2C Chitinases class I%2C score 195.40%2C E-value 9.1e-55;gbkey=misc_feature;gene=chiG
NC_003888.3	RefSeq	sequence_feature	502804	503330	.	+	.	ID=id485;Note=sequence corresponding to Streptomyces coelicolor gene for ChiG%2C partial cds (EMBL:AB017013) from 1449 to 1975;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	502804	503073	.	+	.	ID=id486;Dbxref=GeneID:1095905;Note=Pfam match to entry PF00182 Glyco_hydro_19%2C Chitinases class I%2C score 87.60%2C E-value 7.6e-24;gbkey=misc_feature;gene=chiG
NC_003888.3	RefSeq	gene	503073	503474	.	-	.	ID=gene469;Dbxref=GeneID:1095906;Name=SCF34.02c;gbkey=Gene;gene=SCF34.02c;gene_biotype=protein_coding;gene_synonym=SCF34.02c;locus_tag=SCO0483
NC_003888.3	RefSeq	CDS	503073	503474	.	-	0	ID=cds454;Parent=gene469;Dbxref=Genbank:NP_624800.1,GeneID:1095906;Name=NP_624800.1;Note=SCF34.02c%2C hypothetical protein%2C len: 133 aa%3B unknown function%2C possible CDS suggested by GC frameplot. Contains an Arg-rich region;gbkey=CDS;gene=SCF34.02c;product=hypothetical protein;protein_id=NP_624800.1;transl_table=11
NC_003888.3	RefSeq	gene	503539	504705	.	-	.	ID=gene470;Dbxref=GeneID:1095907;Name=SCF34.03c;gbkey=Gene;gene=SCF34.03c;gene_biotype=protein_coding;gene_synonym=SCF34.03c;locus_tag=SCO0484
NC_003888.3	RefSeq	CDS	503539	504705	.	-	0	ID=cds455;Parent=gene470;Dbxref=Genbank:NP_624801.1,GeneID:1095907;Name=NP_624801.1;Note=SCF34.03c%2C possible monooxygenase%2C len: 388 aa%3B similar to SW:TETX_BACFR (EMBL:M37699)%2C TetX%2C Bacteroides fragilis tetracycline resistance protein from transposon Tn4351/Tn4400 (388 aa)%2C fasta scores%3B opt: 582 z-score: 637.6 E(): 3.7e-28%2C 33.9%25 identity in 351 aa overlap. Also similar to monooxygenases e.g. TR:P96555 (EMBL:AB000564) Sphingomonas sp. salicylate hydroxylase (395 aa) (27.2%25 identity in 360 aa overlap). Similar to others from S.coelicolor e.g. TR:Q9Z4Y6 (EMBL:AL035707) S.coelicolor possible salicylate hydroxylase (420 aa) (32.9%25 identity in 340 aa overlap). Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SCF34.03c;product=monooxygenase;protein_id=NP_624801.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	503629	504246	.	-	.	ID=id487;Dbxref=GeneID:1095907;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 59.40%2C E-value 7.7e-14;gbkey=misc_feature;gene=SCF34.03c
NC_003888.3	RefSeq	gene	504854	505465	.	+	.	ID=gene471;Dbxref=GeneID:1095908;Name=SCF34.04;gbkey=Gene;gene=SCF34.04;gene_biotype=protein_coding;gene_synonym=SCF34.04;locus_tag=SCO0485
NC_003888.3	RefSeq	CDS	504854	505465	.	+	0	ID=cds456;Parent=gene471;Dbxref=Genbank:NP_624802.1,GeneID:1095908;Name=NP_624802.1;Note=SCF34.04%2C possible tetR-family transcriptional regulator%2C len: 203 aa%3B shows weak similarity to SW:TCMR_STRGA (EMBL:M80674)%2C TcmR%2C Streptomyces glaucescens tetracenomycin C transcriptional repressor (226 aa)%2C fasta scores%3B opt: 201 z-score: 254.2 E(): 8.4e-07%2C 32.2%25 identity in 152 aa overlap and to many transcriptional regulators. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Contains probable helix-turn-helix motif at aa 38-59 (Score 1212%2C +3.31 SD);gbkey=CDS;gene=SCF34.04;product=TetR family transcriptional regulator;protein_id=NP_624802.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	504914	505045	.	+	.	ID=id488;Dbxref=GeneID:1095908;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.10%2C E-value 8.7e-11;gbkey=misc_feature;gene=SCF34.04
NC_003888.3	RefSeq	gene	505447	506670	.	-	.	ID=gene472;Dbxref=GeneID:1095909;Name=SCF34.05c;gbkey=Gene;gene=SCF34.05c;gene_biotype=protein_coding;gene_synonym=SCF34.05c;locus_tag=SCO0486
NC_003888.3	RefSeq	CDS	505447	506670	.	-	0	ID=cds457;Parent=gene472;Dbxref=Genbank:NP_624803.1,GeneID:1095909;Name=NP_624803.1;Note=SCF34.05c%2C possible monooxygenase%2C len: 407 aa%3B similar to TR:Q9ZI64 (EMBL:AF039534)%2C NahW%2C Pseudomonas stutzeri salicylate hydroxylase (389 aa)%2C fasta scores%3B opt: 328 z-score: 383.8 E(): 5.1e-14%2C 27.0%25 identity in 403 aa overlap and to the N-terminal half of some epoxidases e.g. SW:ABA2_LYCES (EMBL:Z83835) Lycopersicon esculentum zeaxanthin epoxidase precursor (669 aa) (26.8%25 identity in 336 aa overlap). Also similar to many oxidoreductases e.g. TR:O54177 (EMBL:AL021411) Streptomyces coelicolor possible oxidoreductase (397 aa) (56.1%25 identity in 403 aa overlap). Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SCF34.05c;product=monooxygenase;protein_id=NP_624803.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	505615	506211	.	-	.	ID=id489;Dbxref=GeneID:1095909;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 95.00%2C E-value 1.5e-24;gbkey=misc_feature;gene=SCF34.05c
NC_003888.3	RefSeq	gene	506842	507348	.	+	.	ID=gene473;Dbxref=GeneID:1095910;Name=SCF34.06;gbkey=Gene;gene=SCF34.06;gene_biotype=protein_coding;gene_synonym=SCF34.06;locus_tag=SCO0487
NC_003888.3	RefSeq	CDS	506842	507348	.	+	0	ID=cds458;Parent=gene473;Dbxref=Genbank:NP_624804.1,GeneID:1095910;Name=NP_624804.1;Note=SCF34.06%2C possible MarR-family transcriptional regulator%2C len: 168 aa%3B shows weak similarity to TR:Q53002 (EMBL:U51475)%2C MucS%2C Rhizobium meliloti exopolysaccharide synthesis regulatory protein (190 aa)%2C fasta scores%3B opt: 126 z-score: 160.1 E(): 0.15%2C 24.8%25 identity in 145 aa overlap and to hypothetical transcriptional regulators. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SCF34.06;product=MarR family transcriptional regulator;protein_id=NP_624804.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	506986	507300	.	+	.	ID=id490;Dbxref=GeneID:1095910;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 64.20%2C E-value 2.8e-15;gbkey=misc_feature;gene=SCF34.06
NC_003888.3	RefSeq	gene	507394	510810	.	+	.	ID=gene474;Dbxref=GeneID:1095911;Name=SCF34.07;gbkey=Gene;gene=SCF34.07;gene_biotype=protein_coding;gene_synonym=SCF34.07;locus_tag=SCO0488
NC_003888.3	RefSeq	CDS	507394	510810	.	+	0	ID=cds459;Parent=gene474;Dbxref=Genbank:NP_624805.1,GeneID:1095911;Name=NP_624805.1;Note=SCF34.07%2C hydrolase%2C len: 1138 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Similar to TR:Q9S3L0 (EMBL:AJ238748) alfa-L-ramnisidase from Clostridium stercorarium (874 aa) fasta scores%3B opt: 554%2C Z-score: 585.8%2C E(): 5.4e-25%2C 27.513%25 identity (30.672%25 ungapped) in 796 aa overlap.;gbkey=CDS;gene=SCF34.07;product=hydrolase;protein_id=NP_624805.1;transl_table=11
NC_003888.3	RefSeq	gene	510823	511035	.	-	.	ID=gene475;Dbxref=GeneID:1095912;Name=SCF34.08c;gbkey=Gene;gene=SCF34.08c;gene_biotype=protein_coding;gene_synonym=SCF34.08c;locus_tag=SCO0489
NC_003888.3	RefSeq	CDS	510823	511035	.	-	0	ID=cds460;Parent=gene475;Dbxref=Genbank:NP_624806.1,GeneID:1095912;Name=NP_624806.1;Note=SCF34.08c%2C conserved hypothetical protein%2C len: 70 aa%3B unknown function%2C similar to hypothetical proteins from several bacteria e.g. SW:MBTH_MYCTU (EMBL:Z95208)%2C MbtH%2C Mycobacterium tuberculosis hypothetical protein (71 aa)%2C fasta scores%3B opt: 329 z-score: 486.3 E(): 9.9e-20%2C 70.3%25 identity in 64 aa overlap. Also similar to TR:Q9Z388 (EMBL:AL035654) Streptomyces coelicolor small conserved hypothetical protein (71 aa) (74.2%25 identity in 62 aa overlap);gbkey=CDS;gene=SCF34.08c;product=hypothetical protein;protein_id=NP_624806.1;transl_table=11
NC_003888.3	RefSeq	gene	511124	512215	.	+	.	ID=gene476;Dbxref=GeneID:1095913;Name=SCF34.09;gbkey=Gene;gene=SCF34.09;gene_biotype=protein_coding;gene_synonym=SCF34.09;locus_tag=SCO0490
NC_003888.3	RefSeq	CDS	511124	512215	.	+	0	ID=cds461;Parent=gene476;Dbxref=Genbank:NP_624807.1,GeneID:1095913;Name=NP_624807.1;Note=SCF34.09%2C possible esterase%2C len: 363 aa%3B similar to enterochelin esterases e.g. SW:FES_ECOLI (EMBL:J04216)%2C Fes%2C Escherichia coli enterochelin esterase (374 aa)%2C fasta scores%3B opt: 422 z-score: 474.2 E(): 4.7e-19%2C 32.5%25 identity in 332 aa overlap;gbkey=CDS;gene=SCF34.09;product=esterase;protein_id=NP_624807.1;transl_table=11
NC_003888.3	RefSeq	gene	512302	513924	.	-	.	ID=gene477;Dbxref=GeneID:1095914;Name=SCF34.10c;gbkey=Gene;gene=SCF34.10c;gene_biotype=protein_coding;gene_synonym=SCF34.10c;locus_tag=SCO0491
NC_003888.3	RefSeq	CDS	512302	513924	.	-	0	ID=cds462;Parent=gene477;Dbxref=Genbank:NP_624808.1,GeneID:1095914;Name=NP_624808.1;Note=SCF34.10c%2C probable ABC-transporter transmembrane protein%2C len: 540 aa%3B similar to transporters e.g. SW:PRTD_ERWCH (EMBL:M60395)%2C PrtD%2C Erwinia chrysanthemi proteases secretion ATP-binding protein (575 aa)%2C fasta scores%3B opt: 433 z-score: 468.5 E(): 9.7e-19%2C 29.1%25 identity in 413 aa overlap. Similar to TR:O87312 (EMBL:AF027770)%2C FxtA%2C Mycobacterium smegmatis hypothetical protein at exochelin locus (574 aa) (39.7%25 identity in 524 aa overlap). Similar to others from S.coelicolor e.g. to the N-terminal half of TR:Q9ZBY5 (EMBL:AL034355)%2C CydCD%2C Streptomyces coelicolor probable ABC transporter (1172 aa) (29.6%25 identity in 550 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCF34.10c;product=ABC transporter;protein_id=NP_624808.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	512377	512880	.	-	.	ID=id491;Dbxref=GeneID:1095914;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 71.90%2C E-value 1.4e-17;gbkey=misc_feature;gene=SCF34.10c
NC_003888.3	RefSeq	sequence_feature	512554	512598	.	-	.	ID=id492;Dbxref=GeneID:1095914;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF34.10c
NC_003888.3	RefSeq	gene	513989	524920	.	-	.	ID=gene478;Dbxref=GeneID:1095915;Name=SCF34.11c;gbkey=Gene;gene=SCF34.11c;gene_biotype=protein_coding;gene_synonym=SCF34.11c;locus_tag=SCO0492
NC_003888.3	RefSeq	CDS	513989	524920	.	-	0	ID=cds463;Parent=gene478;Dbxref=Genbank:NP_624809.1,GeneID:1095915;Name=NP_624809.1;Note=SCF34.11c%2C probable peptide synthetase%2C len: 3643 aa%3B similar to parts of many antibiotic peptide synthetases e.g. the C-terminal half of TR:Q9Z4X6 (EMBL:AL035640) Streptomyces coelicolor CDA peptide synthetase I (7463 aa)%2C fasta scores%3B opt: 1948 z-score: 1929.3 E(): 0%2C 33.7%25 identity in 3723 aa overlap. Also similar to parts of peptide synthetases from the exochelin biosynthesis locus of Mycobacterium smegmatis TR:O87314 (EMBL:AF027770)%2C FxbC%2C peptide synthetase (4976 aa) (42.3%25 identity in 3756 aa overlap). Contains 3 Pfam matches to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C 3 Pfam matches to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C 4 Pfam matches to entry PF00668 DUF4%2C Domain of unknown function%2C 2 PS00455  AMP-binding domain signatures%2C 2 PS00012 Phosphopantetheine attachment sites and 1 PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF34.11c;product=peptide synthetase;protein_id=NP_624809.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	514004	514204	.	-	.	ID=id493;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 58.90%2C E-value 1.2e-14;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	514082	514129	.	-	.	ID=id494;Dbxref=GeneID:1095915;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	514460	515677	.	-	.	ID=id495;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 360.70%2C E-value 1.6e-104;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	515951	517081	.	-	.	ID=id496;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 227.30%2C E-value 2.2e-64;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	517154	518251	.	-	.	ID=id497;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 4.30%2C E-value 9.8e-10;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	518300	518491	.	-	.	ID=id498;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 49.80%2C E-value 3.8e-12;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	518375	518422	.	-	.	ID=id499;Dbxref=GeneID:1095915;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	518729	519967	.	-	.	ID=id500;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 473.00%2C E-value 2.4e-138;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	519563	519598	.	-	.	ID=id501;Dbxref=GeneID:1095915;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	520241	521350	.	-	.	ID=id502;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 178.50%2C E-value 1.1e-49;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	521552	522745	.	-	.	ID=id503;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 89.10%2C E-value 8.7e-23;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	522785	522976	.	-	.	ID=id504;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 62.90%2C E-value 9e-16;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	523229	524431	.	-	.	ID=id505;Dbxref=GeneID:1095915;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 451.90%2C E-value 5.6e-132;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	sequence_feature	524042	524077	.	-	.	ID=id506;Dbxref=GeneID:1095915;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SCF34.11c
NC_003888.3	RefSeq	gene	524978	526783	.	-	.	ID=gene479;Dbxref=GeneID:1095916;Name=SCF34.12c;gbkey=Gene;gene=SCF34.12c;gene_biotype=protein_coding;gene_synonym=SCF34.12c;locus_tag=SCO0493
NC_003888.3	RefSeq	CDS	524978	526783	.	-	0	ID=cds464;Parent=gene479;Dbxref=Genbank:NP_624810.1,GeneID:1095916;Name=NP_624810.1;Note=SCF34.12c%2C probable ABC-transporter transmembrane protein%2C len: 601 aa%3B similar to the C-terminal half of TR:O85018 (EMBL:AF034152)%2C ExiT%2C Mycobacterium smegmatis ABC-transporter associated with ferric exochelin biosynthetic and uptake (possibly involved in exochelin secretion) (1122 aa)%2C fasta scores%3B opt: 1778 z-score: 1789.6 E(): 0%2C 50.4%25 identity in 585 aa overlap%2C to TR:Q54204 (EMBL:X89010)%2C StrW%2C Streptomyces glaucescens ABC-transporter from the hydroxystreptomycin production locus (591 aa) (33.1%25 identity in 577 aa overlap) and to many other ABC-transporters. Similar to many others from S.coelicolor e.g. to the C-terminal half of TR:Q9ZBY5 (EMBL:AL034355) CydCD%2C S.coelicolor probable ABC transporter (1172 aa) (30.3%25 identity in 574 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam matches to entry PF00005 ABC_tran%2C ABC transporter and to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF34.12c;product=ABC-transporter transmembrane protein;protein_id=NP_624810.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	525080	525634	.	-	.	ID=id507;Dbxref=GeneID:1095916;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 89.20%2C E-value 8.1e-23;gbkey=misc_feature;gene=SCF34.12c
NC_003888.3	RefSeq	sequence_feature	525590	525613	.	-	.	ID=id508;Dbxref=GeneID:1095916;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF34.12c
NC_003888.3	RefSeq	sequence_feature	525857	526675	.	-	.	ID=id509;Dbxref=GeneID:1095916;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 93.10%2C E-value 5.7e-24;gbkey=misc_feature;gene=SCF34.12c
NC_003888.3	RefSeq	gene	526786	527838	.	-	.	ID=gene480;Dbxref=GeneID:1095917;Name=SCF34.13c;gbkey=Gene;gene=SCF34.13c;gene_biotype=protein_coding;gene_synonym=SCF34.13c;locus_tag=SCO0494
NC_003888.3	RefSeq	CDS	526786	527838	.	-	0	ID=cds465;Parent=gene480;Dbxref=Genbank:NP_624811.1,GeneID:1095917;Name=NP_624811.1;Note=SCF34.13c%2C probable iron-siderophore binding lipoprotein%2C len: 350 aa%3B similar to TR:Q46023 (EMBL:U02617) Corynebacterium diphtheriae DtxR/iron-regulated lipoprotein precursor (355 aa)%2C fasta scores%3B opt: 479 z-score: 518.8 E(): 1.5e-21%2C 34.4%25 identity in 358 aa overlap and SW:FATB_VIBAN (EMBL:J03529)%2C FatB%2C Vibrio anguillarum plasmid pJM1 ferric anguibactin-binding protein precursor (322 aa) (26.2%25 identity in 305 aa overlap). Also similar to other iron-siderophore binding proteins. Contains an appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence. Contains Pfam match to entry PF01497 Peripla_BP_2. Contains a probable coiled-coil from 189 to 219 (31 residues) (Max score: 1.558%2C probability 0.98);gbkey=CDS;gene=SCF34.13c;product=iron-siderophore binding lipoprotein;protein_id=NP_624811.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	526870	527631	.	-	.	ID=id510;Dbxref=GeneID:1095917;Note=Pfam match to entry PF01497 Peripla_BP_2%2C %2C score 96.40%2C E-value 5.5e-25;gbkey=misc_feature;gene=SCF34.13c
NC_003888.3	RefSeq	sequence_feature	527746	527778	.	-	.	ID=id511;Dbxref=GeneID:1095917;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF34.13c
NC_003888.3	RefSeq	gene	527889	528752	.	-	.	ID=gene481;Dbxref=GeneID:1095918;Name=SCF34.14c;gbkey=Gene;gene=SCF34.14c;gene_biotype=protein_coding;gene_synonym=SCF34.14c;locus_tag=SCO0495
NC_003888.3	RefSeq	CDS	527889	528752	.	-	0	ID=cds466;Parent=gene481;Dbxref=Genbank:NP_624812.1,GeneID:1095918;Name=NP_624812.1;Note=SCF34.14c%2C probable iron-siderophore ABC-transporter ATP-binding protein%2C len: 287 aa%3B similar to SW:FEPC_ECOLI (EMBL:X57471)%2C FepC%2C Escherichia coli ferric enterobactin transport ATP-binding protein (271 aa)%2C fasta scores%3B opt: 946 z-score: 1003.1 E(): 0%2C 52.3%25 identity in 262 aa overlap and to many other iron-siderophore ATP-binding proteins. Similar to many others from S. coelicolor e.g. SCI51.25c (EMBL:AL109848) S.coelicolor probable iron-siderophore uptake system ATP-binding component (301 aa) (58.9%25 identity in 258 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF34.14c;product=iron-siderophore ABC-transporter ATP-binding protein;protein_id=NP_624812.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	528063	528623	.	-	.	ID=id512;Dbxref=GeneID:1095918;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 196.10%2C E-value 5.3e-55;gbkey=misc_feature;gene=SCF34.14c
NC_003888.3	RefSeq	sequence_feature	528246	528290	.	-	.	ID=id513;Dbxref=GeneID:1095918;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF34.14c
NC_003888.3	RefSeq	sequence_feature	528579	528602	.	-	.	ID=id514;Dbxref=GeneID:1095918;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF34.14c
NC_003888.3	RefSeq	gene	528791	529897	.	-	.	ID=gene482;Dbxref=GeneID:1095919;Name=SCF34.15c;gbkey=Gene;gene=SCF34.15c;gene_biotype=protein_coding;gene_synonym=SCF34.15c;locus_tag=SCO0496
NC_003888.3	RefSeq	CDS	528791	529897	.	-	0	ID=cds467;Parent=gene482;Dbxref=Genbank:NP_624813.1,GeneID:1095919;Name=NP_624813.1;Note=SCF34.15c%2C probable iron-siderophore permease transmembrane protein%2C len: 368 aa%3B similar to SW:FEPG_ECOLI (EMBL:X57471)%2C FepG%2C Escherichia coli ferric enterobactin transport protein (330 aa)%2C fasta scores%3B opt: 741 z-score: 794.3 E(): 0%2C 38.7%25 identity in 326 aa overlap and to many other iron-siderophore permeases. Similar to others from S. coelicolor e.g. SCI51.26c (EMBL:AL109848) S. coelicolor probable iron-siderophore uptake system transmembrane component (375 aa) (45.9%25 identity in 333 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF01032 FecCD_family%2C FecCD transport family;gbkey=CDS;gene=SCF34.15c;product=iron-siderophore permease transmembrane protein;protein_id=NP_624813.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	528806	529708	.	-	.	ID=id515;Dbxref=GeneID:1095919;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 305.20%2C E-value 8.1e-88;gbkey=misc_feature;gene=SCF34.15c
NC_003888.3	RefSeq	gene	529894	530970	.	-	.	ID=gene483;Dbxref=GeneID:1095920;Name=SCF34.16c;gbkey=Gene;gene=SCF34.16c;gene_biotype=protein_coding;gene_synonym=SCF34.16c;locus_tag=SCO0497
NC_003888.3	RefSeq	CDS	529894	530970	.	-	0	ID=cds468;Parent=gene483;Dbxref=Genbank:NP_624814.1,GeneID:1095920;Name=NP_624814.1;Note=SCF34.16c%2C probable iron-siderophore permease transmembrane protein%2C len: 358 aa%3B similar to SW:FEPD_ECOLI (EMBL:X57471)%2C FepD%2C Escherichia coli ferric enterobactin transport protein (334 aa)%2C fasta scores%3B opt: 796 z-score: 833.5 E(): 0%2C 43.9%25 identity in 330 aa overlap and to many other iron-siderophore permeases. Similar to others from S.coelicolor e.g. SCI51.27c (EMBL:AL109848) S.coelicolor probable iron-siderophore uptake system transmembrane component (348 aa) (46.8%25 identity in 344 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF01032 FecCD_family%2C FecCD transport family;gbkey=CDS;gene=SCF34.16c;product=iron-siderophore permease transmembrane protein;protein_id=NP_624814.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	529915	530826	.	-	.	ID=id516;Dbxref=GeneID:1095920;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 302.30%2C E-value 5.8e-87;gbkey=misc_feature;gene=SCF34.16c
NC_003888.3	RefSeq	gene	530970	532325	.	-	.	ID=gene484;Dbxref=GeneID:1095921;Name=SCF34.17c;gbkey=Gene;gene=SCF34.17c;gene_biotype=protein_coding;gene_synonym=SCF34.17c;locus_tag=SCO0498
NC_003888.3	RefSeq	CDS	530970	532325	.	-	0	ID=cds469;Parent=gene484;Dbxref=Genbank:NP_624815.1,GeneID:1095921;Name=NP_624815.1;Note=SCF34.17c%2C probable peptide monooxygenase%2C len: 451 aa%3B similar to monooxygenases/hydroxylases associated with peptide siderophore biosynthesis e.g. SW:PVDA_BURCE (EMBL:AF013993)%2C PvdA%2C Burkholderia cepacia L-ornithine 5-monooxygenase (444 aa)%2C fasta scores%3B opt: 982 z-score: 1149.4 E(): 0%2C 43.5%25 identity in 405 aa overlap and SW:IUCD_ECOLI (EMBL:M18968)%2C IucD%2C Escherichia coli L-lysine 6-monooxygenase (425 aa) (31.3%25 identity in 425 aa overlap). Also similar to others from S.coelicolor e.g. TR:Q9ZBH9 (EMBL:AL035206) S.coelicolor probable oxidoreductase%2C partial CDS (353 aa) (38.1%25 identity in 349 aa overlap);gbkey=CDS;gene=SCF34.17c;product=peptide monooxygenase;protein_id=NP_624815.1;transl_table=11
NC_003888.3	RefSeq	gene	532501	533448	.	+	.	ID=gene485;Dbxref=GeneID:1095922;Name=SCF34.18;gbkey=Gene;gene=SCF34.18;gene_biotype=protein_coding;gene_synonym=SCF34.18;locus_tag=SCO0499
NC_003888.3	RefSeq	CDS	532501	533448	.	+	0	ID=cds470;Parent=gene485;Dbxref=Genbank:NP_624816.1,GeneID:1095922;Name=NP_624816.1;Note=SCF34.18%2C possible formyltransferase%2C len: 315 aa%3B similar to TR:Q50378 (EMBL:U10425)%2C FxbA%2C Mycobacterium smegmatis  formyltransferase required for exochelin biosynthesis (360 aa)%2C fasta scores%3B opt: 942 z-score: 1102.4 E(): 0%2C 49.5%25 identity in 309 aa overlap. Also similar to many methionyl-tRNA formyltransferases e.g. SW:FMT_PSEAE (EMBL:AF073952)%2C Fmt%2C Pseudomonas aeruginosa methionyl-tRNA formyltransferase (314 aa) (30.3%25 identity in 307 aa overlap). Contains Pfam match to entry PF00551 formyl_transf%2C Formyl transferase;gbkey=CDS;gene=SCF34.18;product=formyltransferase;protein_id=NP_624816.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	532501	532989	.	+	.	ID=id517;Dbxref=GeneID:1095922;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 111.20%2C E-value 6.8e-31;gbkey=misc_feature;gene=SCF34.18
NC_003888.3	RefSeq	gene	533534	533773	.	-	.	ID=gene486;Dbxref=GeneID:1095923;Name=SCF34.19c;gbkey=Gene;gene=SCF34.19c;gene_biotype=protein_coding;gene_synonym=SCF34.19c;locus_tag=SCO0500
NC_003888.3	RefSeq	CDS	533534	533773	.	-	0	ID=cds471;Parent=gene486;Dbxref=Genbank:NP_624817.1,GeneID:1095923;Name=NP_624817.1;Note=SCF34.19c%2C unknown%2C len: 79 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference%2C amino acid composition and the presence of a potential RBS;gbkey=CDS;gene=SCF34.19c;product=hypothetical protein;protein_id=NP_624817.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	533779	533784	.	-	.	ID=id518;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	533812	535764	.	-	.	ID=gene487;Dbxref=GeneID:1095924;Name=SCF34.20c;gbkey=Gene;gene=SCF34.20c;gene_biotype=protein_coding;gene_synonym=SCF34.20c;locus_tag=SCO0501
NC_003888.3	RefSeq	CDS	533812	535764	.	-	0	ID=cds472;Parent=gene487;Dbxref=Genbank:NP_624818.1,GeneID:1095924;Name=NP_624818.1;Note=SCF34.20c%2C hypothetical protein%2C len: 650 aa%3B unknown function%2C shows very weak similarity to SW:Y0D8_MYCTU (EMBL:Z78020) Mycobacterium tuberculosis hypothetical protein (628 aa)%2C fasta scores%3B opt: 233 z-score: 232.7 E(): 1.3e-05%2C 23.6%25 identity in 512 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF34.20c;product=hypothetical protein;protein_id=NP_624818.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	535120	535143	.	-	.	ID=id519;Dbxref=GeneID:1095924;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF34.20c
NC_003888.3	RefSeq	ribosome_entry_site	535958	535962	.	+	.	ID=id520;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	535974	536408	.	+	.	ID=gene488;Dbxref=GeneID:1095925;Name=SCF34.21;gbkey=Gene;gene=SCF34.21;gene_biotype=protein_coding;gene_synonym=SCF34.21;locus_tag=SCO0502
NC_003888.3	RefSeq	CDS	535974	536408	.	+	0	ID=cds473;Parent=gene488;Dbxref=Genbank:NP_624819.1,GeneID:1095925;Name=NP_624819.1;Note=SCF34.21%2C possible membrane protein%2C len: 144 aa%3B unknown function%2C probable CDS suggested by GC frameplot and positional base preference. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCF34.21;product=hypothetical protein;protein_id=NP_624819.1;transl_table=11
NC_003888.3	RefSeq	gene	536532	537512	.	+	.	ID=gene489;Dbxref=GeneID:1095926;Name=SCF34.22;gbkey=Gene;gene=SCF34.22;gene_biotype=protein_coding;gene_synonym=SCF34.22;locus_tag=SCO0503
NC_003888.3	RefSeq	CDS	536532	537512	.	+	0	ID=cds474;Parent=gene489;Dbxref=Genbank:NP_624820.1,GeneID:1095926;Name=NP_624820.1;Note=SCF34.22%2C hypothetical protein%2C len: 326 aa%3B unknown function%2C shows weak similarity to the N-terminal half of SCH10.22C (EMBL:AL049754) Streptomyces coelicolor lipase/esterase (301 aa)%2C fasta scores%3B opt: 178 z-score: 202.4 E(): 0.00065%2C 30.1%25 identity in 163 aa overlap;gbkey=CDS;gene=SCF34.22;product=hypothetical protein;protein_id=NP_624820.1;transl_table=11
NC_003888.3	RefSeq	gene	537623	538942	.	+	.	ID=gene490;Dbxref=GeneID:1095927;Name=SCF34.23;gbkey=Gene;gene=SCF34.23;gene_biotype=protein_coding;gene_synonym=SCF34.23;locus_tag=SCO0504
NC_003888.3	RefSeq	CDS	537623	538942	.	+	0	ID=cds475;Parent=gene490;Dbxref=Genbank:NP_624821.1,GeneID:1095927;Name=NP_624821.1;Note=SCF34.23%2C probable DEAD-box RNA-helicase%2C len: 439 aa%3B similar to many e.g. to TR:O64430 (EMBL:AB010259)%2C Drh1%2C Arabidopsis thaliana DEAD box ATPase/RNA helicase (619 aa)%2C except where the A.thaliana protein is longer at the N-terminus%2C fasta scores%3B opt: 806 z-score: 892.9 E(): 0%2C 35.3%25 identity in 447 aa overlap. Also similar to many  RNA-helicases e.g. SW:RHLE_ECOLI (EMBL:L02123)%2C RhlE%2C Escherichia coli ATP-dependent RNA helicase (454 aa) (36.4%25 identity in 451 aa overlap) and to TR:O54116 (EMBL:AL021529) Streptomyces coelicolor probable DEAD-box RNA-helicase (498 aa) (67.7%25 identity in 424 aa overlap). Contains Pfam matches to entry PF00270 DEAD%2C DEAD/DEAH box helicase and to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain. Contains 2 PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF34.23;product=DEAD/DEAH box helicase;protein_id=NP_624821.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	537680	538315	.	+	.	ID=id521;Dbxref=GeneID:1095927;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 165.20%2C E-value 2.6e-51;gbkey=misc_feature;gene=SCF34.23
NC_003888.3	RefSeq	sequence_feature	537773	537796	.	+	.	ID=id522;Dbxref=GeneID:1095927;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF34.23
NC_003888.3	RefSeq	sequence_feature	538400	538645	.	+	.	ID=id523;Dbxref=GeneID:1095927;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 101.10%2C E-value 2.1e-26;gbkey=misc_feature;gene=SCF34.23
NC_003888.3	RefSeq	sequence_feature	538442	538465	.	+	.	ID=id524;Dbxref=GeneID:1095927;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF34.23
NC_003888.3	RefSeq	gene	539123	542131	.	+	.	ID=gene491;Dbxref=GeneID:1095928;Name=SCF34.24;gbkey=Gene;gene=SCF34.24;gene_biotype=protein_coding;gene_synonym=SCF34.24,SCF6.01;locus_tag=SCO0505
NC_003888.3	RefSeq	CDS	539123	542131	.	+	0	ID=cds476;Parent=gene491;Dbxref=Genbank:NP_733505.1,GeneID:1095928;Name=NP_733505.1;Note=SCF6.01%2C possible multi-domain protein%2C (fragment)%2C len: >152 aa. Highly similar to Amycolatopsis orientalis TR:CAB45032 (EMBL%3B AL078635) large multi-functional protein (987 aa)%2C fasta scores opt: 595 z-score: 714.7 E(): 1.9e-32 58.6%25 identity in 152 aa overlap.~SCF34.24%2C possible large%2C multifunctional hypothetical protein%2C partial CDS%2C len: >891 aa%3B contains a region of weak similarity to members of the glycosyl hydrolase family at approx. aa 700-890 e.g. to part of SW:CTA2_BACCI (EMBL:D88360)%2C Cit%2C Bacillus circulans cycloisomaltooligosaccharide glucanotransferase precursor (964 aa)%2C fasta scores%3B opt: 279 z-score: 292.6 E(): 6.1e-09%2C 33.3%25 identity in 213 aa overlap and region of very weak similarity at approx. aa 200-400 to part of a dehydrogenase SW:SNDH_ACELI (EMBL:D28511) Acetobacter liquefaciens L-sorbosone dehydrogenase (449 aa) (26.2%25 identity in 279 aa overlap). Similar to CZA382.11 (EMBL:AL078635) Amycolatopsis orientalis possible large%2C multifunctional protein (987 aa) (63.2%25 identity in 880 aa overlap). Contains a probable N-terminal signal sequence;gbkey=CDS;gene=SCF34.24;product=large%2C multifunctional hypothetical protein;protein_id=NP_733505.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	542258	542263	.	+	.	ID=id525;gbkey=RBS
NC_003888.3	RefSeq	gene	542269	543099	.	+	.	ID=gene492;Dbxref=GeneID:1095929;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;gene_synonym=nadE1;locus_tag=SCO0506
NC_003888.3	RefSeq	CDS	542269	543099	.	+	0	ID=cds477;Parent=gene492;Dbxref=Genbank:NP_624822.1,GeneID:1095929;Name=NP_624822.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;product=NAD synthetase;protein_id=NP_624822.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	543021	543110	.	+	.	ID=id526;Note=possible stem loop consisting of 90 bp with a 28 bp inverted repeat.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	543119	543535	.	-	.	ID=gene493;Dbxref=GeneID:1095930;Name=SCF6.03c;gbkey=Gene;gene=SCF6.03c;gene_biotype=protein_coding;gene_synonym=SCF6.03c;locus_tag=SCO0507
NC_003888.3	RefSeq	CDS	543119	543535	.	-	0	ID=cds478;Parent=gene493;Dbxref=Genbank:NP_624823.1,GeneID:1095930;Name=NP_624823.1;Note=SCF6.03c%2C unknown%2C len: 138 aa. Similar to the C-terminus of many hypothetical oxidoreductases e.g. Streptomyces coelicolor TR: CAB53280 (EMBL%3B AL109972) oxidoreductase SCJ9A.19C (311 aa)%2C fasta scores opt: 307 z-score: 331.8 E(): 4.1e-11 44.4%25 identity in 126 aa overlap.;gbkey=CDS;gene=SCF6.03c;product=hypothetical protein;protein_id=NP_624823.1;transl_table=11
NC_003888.3	RefSeq	gene	543545	544087	.	+	.	ID=gene494;Dbxref=GeneID:1095931;Name=SCF6.04;gbkey=Gene;gene=SCF6.04;gene_biotype=protein_coding;gene_synonym=SCF6.04;locus_tag=SCO0508
NC_003888.3	RefSeq	CDS	543545	544087	.	+	0	ID=cds479;Parent=gene494;Dbxref=Genbank:NP_624824.1,GeneID:1095931;Name=NP_624824.1;Note=SCF6.04%2C possible tetR family transcriptional regulator%2C len: 180 aa. Similar to many e.g. Streptomyces glaucescens SW:TCMR_STRGA (EMBL:M80674) tetracenomycin C transcriptional repressor (226 aa)%2C fasta scores opt: 225 z-score: 288.9 E(): 1e-08 34.5%25 identity in 174 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the possible helix-turn-helix motif between residues 13..34 (+3.92 SD).;gbkey=CDS;gene=SCF6.04;product=tetR family transcriptional regulator;protein_id=NP_624824.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	543572	543670	.	+	.	ID=id527;Dbxref=GeneID:1095931;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 33.70%2C E-value 1.3e-07;gbkey=misc_feature;gene=SCF6.04
NC_003888.3	RefSeq	gene	544194	545717	.	+	.	ID=gene495;Dbxref=GeneID:1095932;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;gene_synonym=glpK2;locus_tag=SCO0509
NC_003888.3	RefSeq	CDS	544194	545717	.	+	0	ID=cds480;Parent=gene495;Dbxref=Genbank:NP_624825.1,GeneID:1095932;Name=NP_624825.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=NP_624825.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	544419	545540	.	+	.	ID=id528;Dbxref=GeneID:1095932;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C score 419.50%2C E-value 3.2e-122;gbkey=misc_feature;gene=glpK
NC_003888.3	RefSeq	sequence_feature	544593	544631	.	+	.	ID=id529;Dbxref=GeneID:1095932;Note=PS00933 FGGY family of carbohydrate kinases signature 1;gbkey=misc_feature;gene=glpK
NC_003888.3	RefSeq	sequence_feature	545292	545354	.	+	.	ID=id530;Dbxref=GeneID:1095932;Note=PS00445 FGGY family of carbohydrate kinases signature 2;gbkey=misc_feature;gene=glpK
NC_003888.3	RefSeq	gene	545740	546147	.	-	.	ID=gene496;Dbxref=GeneID:1095933;Name=SCF6.06c;gbkey=Gene;gene=SCF6.06c;gene_biotype=pseudogene;gene_synonym=SCF6.06c;locus_tag=SCO0510;pseudo=true
NC_003888.3	RefSeq	sequence_feature	545740	546147	.	-	.	ID=id531;Dbxref=GeneID:1095933;Note=SCF6.06c%2C oxidoreductase%2C pseudogene%2C len: 83 aa. Similar to parts of Streptomyces lividans SW:OXIR_STRLI probable oxidoreductase (EC 1.-.-.-) (297 aa) and Streptomyces antibioticus SW:OXIR_STRAT (EMBL%3B M96551) probable oxidoreductase (EC 1.-.-.-) (298 aa). This CDS has at least one frame shift in the sequence after residue 35%2C nucleotide position 4371.%3Boxidoreductase (pseudogene);gbkey=misc_feature;gene=SCF6.06c
NC_003888.3	RefSeq	ribosome_entry_site	546341	546345	.	+	.	ID=id532;gbkey=RBS
NC_003888.3	RefSeq	gene	546358	547116	.	+	.	ID=gene497;Dbxref=GeneID:1095934;Name=SCF6.07;gbkey=Gene;gene=SCF6.07;gene_biotype=protein_coding;gene_synonym=SCF6.07;locus_tag=SCO0511
NC_003888.3	RefSeq	CDS	546358	547116	.	+	0	ID=cds481;Parent=gene497;Dbxref=Genbank:NP_624826.1,GeneID:1095934;Name=NP_624826.1;Note=SCF6.07%2C possible dehydrogenase (hypothetical protein)%2C len: 252 aa. Highly similar to many e.g. Pseudomonas paucimobilis SW:LINX_PSEPA (EMBL%3B D23722) 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase (EC 1.1.-.-) (2%2C5-ddol dehydrogenase) LinX (250 aa)%2C fasta scores opt: 532 z-score: 558.4 E(): 9.7e-24 40.0%25 identity in 245 aa overlap. Also similar to many Streptomyces coelicolor oxidoreductases e.g. TR:O88068 (EMBL%3B AL031541) dehydrogenase SCI35.33C (260 aa)%2C fasta scores opt: 488 z-score: 438.3 E(): 4.1e-19 38.7%25 identity in 256 aa overlap. Contains a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature and Pfam hits to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SCF6.07;product=dehydrogenase;protein_id=NP_624826.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	546373	546933	.	+	.	ID=id533;Dbxref=GeneID:1095934;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 217.30%2C E-value 2.3e-61;gbkey=misc_feature;gene=SCF6.07
NC_003888.3	RefSeq	sequence_feature	546784	546870	.	+	.	ID=id534;Dbxref=GeneID:1095934;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCF6.07
NC_003888.3	RefSeq	sequence_feature	546985	547077	.	+	.	ID=id535;Dbxref=GeneID:1095934;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 42.80%2C E-value 7.7e-09;gbkey=misc_feature;gene=SCF6.07
NC_003888.3	RefSeq	gene	547135	547743	.	-	.	ID=gene498;Dbxref=GeneID:1095935;Name=SCF6.08c;gbkey=Gene;gene=SCF6.08c;gene_biotype=protein_coding;gene_synonym=SCF6.08c;locus_tag=SCO0512
NC_003888.3	RefSeq	CDS	547135	547743	.	-	0	ID=cds482;Parent=gene498;Dbxref=Genbank:NP_624827.1,GeneID:1095935;Name=NP_624827.1;Note=SCF6.08c%2C possible regulatory protein%2C len: 202 aa. Similar to many other regulatory proteins e.g. Streptomyces coelicolor TR:CAB53122 (EMBL%3B AL109962) transcriptional regulatory protein SCJ1.04 (207 aa)%2C fasta scores opt: 436 z-score: 515.3 E(): 2.5e-21 44.4%25 identity in 196 aa overlap.;gbkey=CDS;gene=SCF6.08c;product=regulatory protein;protein_id=NP_624827.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	547751	547755	.	-	.	ID=id536;gbkey=RBS
NC_003888.3	RefSeq	gene	547809	548900	.	+	.	ID=gene499;Dbxref=GeneID:1095936;Name=SCF6.09;gbkey=Gene;gene=SCF6.09;gene_biotype=protein_coding;gene_synonym=SCF6.09;locus_tag=SCO0513
NC_003888.3	RefSeq	CDS	547809	548900	.	+	0	ID=cds483;Parent=gene499;Dbxref=Genbank:NP_624828.1,GeneID:1095936;Name=NP_624828.1;Note=SCF6.09%2C integral membrane protein%2C len: 363 aa. Similar to a number of hypothetical integral membrane proteins e.g. Escherichia coli SW:PERM_ECOLI (EMBL%3B AE000335) permease PerM (353 aa)%2C fasta scores opt: 383 z-score: 425.2 E(): 2.6e-16 27.5%25 identity in 346 aa overlap and Mycobacterium tuberculosis TR:O53656 (EMBL%3B AL021928) hypothetical 38.0 KD protein (367 aa)%2C fasta scores opt: 687 z-score: 755.9 E():0 33.5%25 identity in 340 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a Pfam match to entry PF01594 DUF20%2C  permease.;gbkey=CDS;gene=SCF6.09;product=hypothetical protein;protein_id=NP_624828.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	547896	548852	.	+	.	ID=id537;Dbxref=GeneID:1095936;Note=Pfam match to entry PF01594 DUF20%2C  permease%2C score 161.60%2C E-value 1.3e-44;gbkey=misc_feature;gene=SCF6.09
NC_003888.3	RefSeq	gene	548968	549621	.	+	.	ID=gene500;Dbxref=GeneID:1095937;Name=SCF6.10;gbkey=Gene;gene=SCF6.10;gene_biotype=protein_coding;gene_synonym=SCF6.10;locus_tag=SCO0514
NC_003888.3	RefSeq	CDS	548968	549621	.	+	0	ID=cds484;Parent=gene500;Dbxref=Genbank:NP_624829.1,GeneID:1095937;Name=NP_624829.1;Note=SCF6.10%2C unknown%2C len: 217 aa.;gbkey=CDS;gene=SCF6.10;product=hypothetical protein;protein_id=NP_624829.1;transl_table=11
NC_003888.3	RefSeq	gene	549850	550458	.	+	.	ID=gene501;Dbxref=GeneID:1095938;Name=SCF6.11;gbkey=Gene;gene=SCF6.11;gene_biotype=pseudogene;gene_synonym=SCF6.11;locus_tag=SCO0515;pseudo=true
NC_003888.3	RefSeq	sequence_feature	549850	550458	.	+	.	ID=id538;Dbxref=GeneID:1095938;Note=SCF6.11%2C unknown%2C pseudogene%2C len: 128 aa. Similar to Escherichia coli SW:YAHD_ECOLI (EMBL%3B AE000139) hypothetical 21.7 KD protein in BETT-PRPR intergenic region (201 aa). The high similarity extends past the last possible translational start codon suitable for this CDS.%3Bhypothetical protein SCF6.11 (pseudogene);gbkey=misc_feature;gene=SCF6.11
NC_003888.3	RefSeq	gene	550455	551633	.	+	.	ID=gene502;Dbxref=GeneID:1095939;Name=SCF6.12;gbkey=Gene;gene=SCF6.12;gene_biotype=protein_coding;gene_synonym=SCF6.12;locus_tag=SCO0516
NC_003888.3	RefSeq	CDS	550455	551633	.	+	0	ID=cds485;Parent=gene502;Dbxref=Genbank:NP_624830.1,GeneID:1095939;Name=NP_624830.1;Note=SCF6.12%2C possible lipoprotein%2C len:392 aa. Weakly similar to Methylobacterium extorquens TR:O30796 (EMBL%3B AF017434) hypothetical protein MxaE (281 aa)%2C fasta scores opt: 205 z-score: 214.7 E(): 0.00014 32.5%25 identity in 295 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCF6.12;product=lipoprotein;protein_id=NP_624830.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	550491	550523	.	+	.	ID=id539;Dbxref=GeneID:1095939;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF6.12
NC_003888.3	RefSeq	gene	551918	552115	.	+	.	ID=gene503;Dbxref=GeneID:1095940;Name=SCF6.13;gbkey=Gene;gene=SCF6.13;gene_biotype=protein_coding;gene_synonym=SCF6.13;locus_tag=SCO0517
NC_003888.3	RefSeq	CDS	551918	552115	.	+	0	ID=cds486;Parent=gene503;Dbxref=Genbank:NP_624831.1,GeneID:1095940;Name=NP_624831.1;Note=SCF6.13%2C hypothetical protein%2C len: 66 aa. Gene fragment shares a high level of similarity with Streptomyces coelicolor TR:CAB53135 (EMBL%3B AL109962) possible regulator protein SCJ1.17 (190 aa)%3B fasta scores: opt: 275 z-score: 356.5 E(): 1.7e-12%3B 62.1%25 identity in 66 aa overlap;end_range=552115,.;gbkey=CDS;gene=SCF6.13;partial=true;product=hypothetical protein;protein_id=NP_624831.1;start_range=.,551918;transl_table=11
NC_003888.3	RefSeq	gene	552094	552351	.	+	.	ID=gene504;Dbxref=GeneID:1095941;Name=SCF6.14;gbkey=Gene;gene=SCF6.14;gene_biotype=protein_coding;gene_synonym=SCF6.14;locus_tag=SCO0518
NC_003888.3	RefSeq	CDS	552094	552351	.	+	0	ID=cds487;Parent=gene504;Dbxref=Genbank:NP_624832.1,GeneID:1095941;Name=NP_624832.1;Note=SCF6.14%2C hypothetical protein%2C len: 86 aa. Gene fragment that is highly similar to Streptomyces coelicolor TR:Q9RI29 (EMBL:AL109989) nitrate reductase delta chain NarI2 (256 aa)%3B fasta scores: opt: 409 Z-score: 526.8 bits: 103.5 E(): 9.3e-22%3B 74.390%25 identity in 82 aa overlap;end_range=552351,.;gbkey=CDS;gene=SCF6.14;partial=true;product=hypothetical protein;protein_id=NP_624832.1;transl_table=11
NC_003888.3	RefSeq	gene	552403	553140	.	-	.	ID=gene505;Dbxref=GeneID:1095942;Name=SCF6.15c;gbkey=Gene;gene=SCF6.15c;gene_biotype=protein_coding;gene_synonym=SCF6.15c;locus_tag=SCO0519
NC_003888.3	RefSeq	CDS	552403	553140	.	-	0	ID=cds488;Parent=gene505;Dbxref=Genbank:NP_624833.1,GeneID:1095942;Name=NP_624833.1;Note=SCF6.15c%2C possible oxidoreductase%2C len: 245 aa. Similar to many e.g. Bacillus megaterium SW:DHG2_BACME (EMBL%3B D90044) glucose 1-dehydrogenase II (EC 1.1.1.47) (GLCDH-II) (261 aa)%2C fasta scores opt: 402 z-score: 449.5 E(): 1.1e-17 35.1%25 identity in 228 aa overlap. Also similar to many other Streptomyces coelicolor oxidoreductases e.g. TR:CAB41284 (EMBL%3B AL049707) (260 aa)%2C fasta scores opt: 395 z-score: 365.3 E(): 4.8e-15 37.2%25 identity in 242 aa overlap. Contains a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=CDS;gene=SCF6.15c;product=oxidoreductase;protein_id=NP_624833.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	552571	553122	.	-	.	ID=id540;Dbxref=GeneID:1095942;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 199.00%2C E-value 7.2e-56;gbkey=misc_feature;gene=SCF6.15c
NC_003888.3	RefSeq	sequence_feature	552631	552717	.	-	.	ID=id541;Dbxref=GeneID:1095942;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCF6.15c
NC_003888.3	RefSeq	ribosome_entry_site	553262	553267	.	+	.	ID=id542;gbkey=RBS
NC_003888.3	RefSeq	gene	553277	553861	.	+	.	ID=gene506;Dbxref=GeneID:1095943;Name=SCF6.16;gbkey=Gene;gene=SCF6.16;gene_biotype=protein_coding;gene_synonym=SCF6.16;locus_tag=SCO0520
NC_003888.3	RefSeq	CDS	553277	553861	.	+	0	ID=cds489;Parent=gene506;Dbxref=Genbank:NP_624834.1,GeneID:1095943;Name=NP_624834.1;Note=SCF6.16%2C tetR family transcriptional regulator%2C len: 194 aa. Weakly similar to many other tetR family regulators e.g. Streptomyces sp. TR:O24741 (EMBL:AB001683) FarA (221 aa)%2C fasta scores opt: 161 z-score: 205.5 E(): 0.00044 28.4%25 identity in 190 aa overlap and Streptomyces coelicolor TR:O86852 (EMBL:AJ007731) gamma-butyrolactone binding protein (215 aa)%2C fasta scores opt: 149 z-score: 191.2 E(): 0.0028 26.6%25 identity in 188 aa overlap. Also highly similar to Streptomyces coelicolor SCF51A.08 (EMBL%3B AL121596) tetR family transcriptional regulator (227 aa)%2C fasta scores opt: 479 z-score: 463.7 E(): 1.5e-20 43.7%25 identity in 183 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. The possible helix-turn-helix motif lies between residues 36..57 (+4.21 SD).;gbkey=CDS;gene=SCF6.16;product=tetR family transcriptional regulator;protein_id=NP_624834.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	553334	553471	.	+	.	ID=id543;Dbxref=GeneID:1095943;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 31.00%2C E-value 7.1e-07;gbkey=misc_feature;gene=SCF6.16
NC_003888.3	RefSeq	gene	553892	554473	.	+	.	ID=gene507;Dbxref=GeneID:1095944;Name=SCF11.01;gbkey=Gene;gene=SCF11.01;gene_biotype=protein_coding;gene_synonym=SCF11.01,SCF6.17;locus_tag=SCO0521
NC_003888.3	RefSeq	CDS	553892	554473	.	+	0	ID=cds490;Parent=gene507;Dbxref=Genbank:NP_624835.1,GeneID:1095944;Name=NP_624835.1;Note=SCF11.01%2C possible tetR family transcriptional regulator%2C partial CDS%2C len: >32 aa. Previously annotated as Streptomyces coelicolor SCF6.17%2C possible tetR family trasncriptional regulator%2C len: >193 aa. Similar to several e.g. Streptomyces coelicolor TR:CAB56142 (EMBL%3B AL117669) transcriptional regulator SCF12.15 (188 aa)%2C fasta scores opt:446 z-score: 521.2 E(): 1.2e-21 43.5%25 identity in 184 aa overlap and Streptomyces glaucescens SW:TCMR_STRGA (EMBL%3B M80674) tetracenomycin C transcriptional repressor (226 aa)%2C fasta scores opt: 202 z-score: 242.5 E(): 3.8e-06 29.3%25 identity in 164 aa overlap.~SCF6.17%2C possible tetR family transcriptional regulator%2C len: 193 aa. Similar to several e.g. Streptomyces coelicolor TR:CAB56142 (EMBL%3B AL117669) transcriptional regulator SCF12.15 (188 aa)%2C fasta scores opt:446 z-score: 521.2 E(): 1.2e-21 43.5%25 identity in 184 aa overlap and Streptomyces glaucescens SW:TCMR_STRGA (EMBL%3B M80674) tetracenomycin C transcriptional repressor (226 aa)%2C fasta scores opt: 202 z-score: 242.5 E(): 3.8e-06 29.3%25 identity in 164 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. The possible helix-turn-helix motif lies between residues 29..50 (+2.70 SD).;gbkey=CDS;gene=SCF11.01;product=TetR family transcriptional regulator;protein_id=NP_624835.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	553925	554056	.	+	.	ID=id544;Dbxref=GeneID:1095944;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 37.70%2C E-value 1e-08;gbkey=misc_feature;gene=SCF11.01
NC_003888.3	RefSeq	ribosome_entry_site	554627	554630	.	+	.	ID=id545;gbkey=RBS
NC_003888.3	RefSeq	gene	554649	555440	.	+	.	ID=gene508;Dbxref=GeneID:1095945;Name=SCF11.02;gbkey=Gene;gene=SCF11.02;gene_biotype=protein_coding;gene_synonym=SCF11.02;locus_tag=SCO0522
NC_003888.3	RefSeq	CDS	554649	555440	.	+	0	ID=cds491;Parent=gene508;Dbxref=Genbank:NP_624836.1,GeneID:1095945;Name=NP_624836.1;Note=SCF11.02%2C probable oxidoreductase%2C len: 262 aa%3B similar to TR:O54197 (EMBL:AJ000671) Streptomyces clavuligerus clavulanate-9-aldehyde reductase%2C 247 aa%3B fasta scores: opt: 501 z-score: 567.7 E(): 3e-24%3B 39.1%25 identity in 238 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and prosite match to entry PS00061 Short-chain dehydrogenases/reductases family signature. also similar to Streptomyces coelicolor SCF6.15c%2C 245 aa%3B fasta scores: opt: 818 z-score: 805.2 E():0%3B 56.5%25 identity in 237 aa overlap;gbkey=CDS;gene=SCF11.02;product=oxidoreductase;protein_id=NP_624836.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	554721	555272	.	+	.	ID=id546;Dbxref=GeneID:1095945;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 248.20%2C E-value 1.2e-70;gbkey=misc_feature;gene=SCF11.02
NC_003888.3	RefSeq	sequence_feature	555126	555212	.	+	.	ID=id547;Dbxref=GeneID:1095945;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCF11.02
NC_003888.3	RefSeq	gene	555468	555905	.	-	.	ID=gene509;Dbxref=GeneID:1095946;Name=SCF11.03c;gbkey=Gene;gene=SCF11.03c;gene_biotype=protein_coding;gene_synonym=SCF11.03c;locus_tag=SCO0523
NC_003888.3	RefSeq	CDS	555468	555905	.	-	0	ID=cds492;Parent=gene509;Dbxref=Genbank:NP_624837.1,GeneID:1095946;Name=NP_624837.1;Note=SCF11.03c%2C probable transcriptional regulator%2C len: 145 aa%3B similar to SW:ASNC_ECOLI (EMBL:AE000451) Escherichia coli%2C regulatory protein AsnC%2C 152 aa%3B fasta scores: opt: 222 z-score: 287.1 E(): 1.3e-08%3B 26.9%25 identity in 145 aa overlap. Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family;gbkey=CDS;gene=SCF11.03c;product=transcriptional regulator;protein_id=NP_624837.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	555537	555833	.	-	.	ID=id548;Dbxref=GeneID:1095946;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 52.20%2C E-value 1.1e-11;gbkey=misc_feature;gene=SCF11.03c
NC_003888.3	RefSeq	ribosome_entry_site	555981	555985	.	+	.	ID=id549;gbkey=RBS
NC_003888.3	RefSeq	gene	555990	556898	.	+	.	ID=gene510;Dbxref=GeneID:1095947;Name=SCF11.04;gbkey=Gene;gene=SCF11.04;gene_biotype=protein_coding;gene_synonym=SCF11.04;locus_tag=SCO0524
NC_003888.3	RefSeq	CDS	555990	556898	.	+	0	ID=cds493;Parent=gene510;Dbxref=Genbank:NP_624838.1,GeneID:1095947;Name=NP_624838.1;Note=SCF11.04%2C possible gluconolactonase%2C len: 302 aa%3B similar to SW:GNL_ZYMMO (EMBL:X67189) Zymomonas mobilis gluconolactonase precursor (EC 3.1.1.17) D-glucono-delta-lactone lactonohydrolase%3B fasta scores: opt: 326 z-score: 392.6 E(): 1.7e-14%3B 28.7%25 identity in 258 aa overlap;gbkey=CDS;gene=SCF11.04;product=gluconolactonase;protein_id=NP_624838.1;transl_table=11
NC_003888.3	RefSeq	gene	557029	557844	.	+	.	ID=gene511;Dbxref=GeneID:1095948;Name=SCF11.05;gbkey=Gene;gene=SCF11.05;gene_biotype=protein_coding;gene_synonym=SCF11.05;locus_tag=SCO0525
NC_003888.3	RefSeq	CDS	557029	557844	.	+	0	ID=cds494;Parent=gene511;Dbxref=Genbank:NP_624839.1,GeneID:1095948;Name=NP_624839.1;Note=SCF11.05%2C hypothetical protein%2C len: 271 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB45341 (EMBL:AL079345) Streptomyces coelicolor SCE68.05C hypothetical 33.1 KD protein%2C 300 aa%3B fasta scores: opt: 808 z-score: 960.4 E(): 0%3B 53.2%25 identity in 250 aa overlap;gbkey=CDS;gene=SCF11.05;product=hypothetical protein;protein_id=NP_624839.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	557868	557872	.	+	.	ID=id550;gbkey=RBS
NC_003888.3	RefSeq	gene	557882	558715	.	+	.	ID=gene512;Dbxref=GeneID:1095949;Name=SCF11.06;gbkey=Gene;gene=SCF11.06;gene_biotype=protein_coding;gene_synonym=SCF11.06;locus_tag=SCO0526
NC_003888.3	RefSeq	CDS	557882	558715	.	+	0	ID=cds495;Parent=gene512;Dbxref=Genbank:NP_624840.1,GeneID:1095949;Name=NP_624840.1;Note=SCF11.06%2C possible oxidoreductase%2C len: 277 aa%3B similar to TR:O53622 (EMBL:AL021428) Mycobacterium tuberculosis  oxidoreductase MTV030.21c%2C 276 aa%3B fasta scores: opt: 276 z-score: 329.4 E(): 5.6e-11%3B 24.7%25 identity in 267 aa overlap and to SW:PRXC_PSEFL (EMBL:AF031153) Pseudomonas fluorescens non-heme chloroperodixase (EC 1.11.1.10) (chloride peroxidase) (CPO-F) (chloropeorixidase F) Cpo or CpoF%3B fasta scores: opt: 233 z-score: 279.3 E():3.5e-08%3B 26.1%25 identity in 283 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SCF11.06;product=oxidoreductase;protein_id=NP_624840.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	558041	558700	.	+	.	ID=id551;Dbxref=GeneID:1095949;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 62.30%2C E-value 1e-14;gbkey=misc_feature;gene=SCF11.06
NC_003888.3	RefSeq	gene	558812	559015	.	-	.	ID=gene513;Dbxref=GeneID:1095950;Name=SCF11.07c;gbkey=Gene;gene=SCF11.07c;gene_biotype=protein_coding;gene_synonym=SCF11.07c,scoF;locus_tag=SCO0527
NC_003888.3	RefSeq	CDS	558812	559015	.	-	0	ID=cds496;Parent=gene513;Dbxref=Genbank:NP_624841.1,GeneID:1095950;Name=NP_624841.1;Note=SCF11.07c%2C scoF%2C cold shock protein%2C len: 67 aa. Identical to SW:CSPF_STRCO (EMBL:X92686) Streptomyces coelicolor cold shock protein ScoF and similar to SW:CSP7_STRCL (EMBL:X68245) Streptomyces clavuligerus cold shock-like protein 7.0%2C 66 aa%3B fasta scores: opt: 362 z-score: 493.9 E(): 3.8e-20%3B 74.6%25 identity in 67 aa overlap and to Streptomyces coelicolor SC10A5.26c%2C 67 aa%3B fasta scores: opt: 383 z-score: 518.2 E(): 1.5e-23%3B 82.1%25 identity in 67 aa overlap. Contains Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain and Prosite match to entry PS00352 'Cold-shock' DNA-binding domain signature;gbkey=CDS;gene=SCF11.07c;product=cold shock protein;protein_id=NP_624841.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	558821	558973	.	-	.	ID=id552;Dbxref=GeneID:1095950;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 101.10%2C E-value 9.5e-27;gbkey=misc_feature;gene=SCF11.07c
NC_003888.3	RefSeq	sequence_feature	558914	558973	.	-	.	ID=id553;Dbxref=GeneID:1095950;Note=PS00352 'Cold-shock' DNA-binding domain signature;gbkey=misc_feature;gene=SCF11.07c
NC_003888.3	RefSeq	ribosome_entry_site	559336	559340	.	+	.	ID=id554;gbkey=RBS
NC_003888.3	RefSeq	gene	559346	560098	.	+	.	ID=gene514;Dbxref=GeneID:1095951;Name=SCF11.08;gbkey=Gene;gene=SCF11.08;gene_biotype=protein_coding;gene_synonym=SCF11.08;locus_tag=SCO0528
NC_003888.3	RefSeq	CDS	559346	560098	.	+	0	ID=cds497;Parent=gene514;Dbxref=Genbank:NP_624842.1,GeneID:1095951;Name=NP_624842.1;Note=SCF11.08%2C possible lipoprotein%2C len: 261 aa%3B similar to various hypothetical proteins%2C e.g. TR:O07236 (EMBL:Z96800) Mycobacterium tuberculosis hypothetical 22.5 KD protein%2C 218 aa%3B fasta scores: opt: 157 z-score: 172.7 E(): 0.03%3B 25.3%25 identity in 194 aa overlap. Contains a Prosite match correctly situated to entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains probable N-terminal signal sequence;gbkey=CDS;gene=SCF11.08;product=lipoprotein;protein_id=NP_624842.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	559385	559417	.	+	.	ID=id555;Dbxref=GeneID:1095951;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF11.08
NC_003888.3	RefSeq	gene	560127	561545	.	-	.	ID=gene515;Dbxref=GeneID:1095952;Name=SCF11.09c;gbkey=Gene;gene=SCF11.09c;gene_biotype=protein_coding;gene_synonym=SCF11.09c;locus_tag=SCO0529
NC_003888.3	RefSeq	CDS	560127	561545	.	-	0	ID=cds498;Parent=gene515;Dbxref=Genbank:NP_624843.1,GeneID:1095952;Name=NP_624843.1;Note=SCF11.09c%2C probable oxidoreductase (hypothetical protein)%2C len: 508 aa%3B similar to TR:P75002 (EMBL:Z80356) Zymomonas mobilis glucose-fructose oxidoreductase precursor%2C 433 aa%3B fasta scores: opt: 270 z-score: 301.6 E(): 2e-09%3B 28.8%25 identity in 219 aa overlap. Contains a Pfam match to entry PF01408 GFO_IDH_MocA%2C oxidoreductase family. Contains possible n-terminal region signal sequence peptide;gbkey=CDS;gene=SCF11.09c;product=oxidoreductase;protein_id=NP_624843.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	560583	561371	.	-	.	ID=id556;Dbxref=GeneID:1095952;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 18.10%2C E-value 9.1e-06;gbkey=misc_feature;gene=SCF11.09c
NC_003888.3	RefSeq	ribosome_entry_site	561556	561560	.	-	.	ID=id557;gbkey=RBS
NC_003888.3	RefSeq	gene	561731	562576	.	-	.	ID=gene516;Dbxref=GeneID:1095953;Name=SCF11.10c;gbkey=Gene;gene=SCF11.10c;gene_biotype=protein_coding;gene_synonym=SCF11.10c;locus_tag=SCO0530
NC_003888.3	RefSeq	CDS	561731	562576	.	-	0	ID=cds499;Parent=gene516;Dbxref=Genbank:NP_624844.1,GeneID:1095953;Name=NP_624844.1;Note=SCF11.10c%2C possible transcriptional regulator%2C len: 281 aa%3B similar to SW:FARR_ECOLI (EMBL:X15790) Escherichia coli fatty acyl responsive regulator (P30 protein)%2C 240 aa%3B fasta scores: opt: 286 z-score: 325.5 E(): 9.2e-11%3B 27.7%25 identity in 224 aa overlap. Contains Pfam match to entry PF00392 gntR%2C bacterial regulatory proteins%2C gntR family and Prosite match to entry PS00043 bacterial regulatory proteins%2C gntR family signature. Contains a possible helix-turn-helix motif between residues 36..57%2C score 1211 (+3.31 SD);gbkey=CDS;gene=SCF11.10c;product=transcriptional regulator;protein_id=NP_624844.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	562355	562528	.	-	.	ID=id558;Dbxref=GeneID:1095953;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 78.70%2C E-value 8.7e-23;gbkey=misc_feature;gene=SCF11.10c
NC_003888.3	RefSeq	sequence_feature	562403	562477	.	-	.	ID=id559;Dbxref=GeneID:1095953;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCF11.10c
NC_003888.3	RefSeq	sequence_feature	562409	562474	.	-	.	ID=id560;Dbxref=GeneID:1095953;Note=Helix-turn-helix from SCF11.10c between residues 36..57%2C score 1211 (+3.31 SD);gbkey=misc_feature;gene=SCF11.10c
NC_003888.3	RefSeq	ribosome_entry_site	562583	562586	.	-	.	ID=id561;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	562793	562796	.	+	.	ID=id562;gbkey=RBS
NC_003888.3	RefSeq	gene	562803	564071	.	+	.	ID=gene517;Dbxref=GeneID:1095954;Name=SCF11.11;gbkey=Gene;gene=SCF11.11;gene_biotype=protein_coding;gene_synonym=SCF11.11;locus_tag=SCO0531
NC_003888.3	RefSeq	CDS	562803	564071	.	+	0	ID=cds500;Parent=gene517;Dbxref=Genbank:NP_624845.1,GeneID:1095954;Name=NP_624845.1;Note=SCF11.11%2C probable sugar transporter sugar binding protein%2C len: 422 aa%3B similar to TR:P72397 (EMBL:Y07706) Streptomyces coelicolor MalE%2C maltose-binding protein%2C 423 aa%3B fasta scores: opt: 367 z-score: 390.0 E(): 2.4e-14%3B 27.2%25 identity in 419 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C bacterial extracellular solute-binding protein and a prosite match correctly situated to entry PS00013 prokaryotic membrane lipoprotein lipid attachment site. Contains probable N-terminal signal sequence;gbkey=CDS;gene=SCF11.11;product=sugar transporter sugar binding protein;protein_id=NP_624845.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	562833	562865	.	+	.	ID=id563;Dbxref=GeneID:1095954;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF11.11
NC_003888.3	RefSeq	sequence_feature	563211	564050	.	+	.	ID=id564;Dbxref=GeneID:1095954;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 62.00%2C E-value 1.2e-14;gbkey=misc_feature;gene=SCF11.11
NC_003888.3	RefSeq	gene	564141	565049	.	+	.	ID=gene518;Dbxref=GeneID:1095955;Name=SCF11.12;gbkey=Gene;gene=SCF11.12;gene_biotype=protein_coding;gene_synonym=SCF11.12;locus_tag=SCO0532
NC_003888.3	RefSeq	CDS	564141	565049	.	+	0	ID=cds501;Parent=gene518;Dbxref=Genbank:NP_624846.1,GeneID:1095955;Name=NP_624846.1;Note=SCF11.12%2C probable sugar transporter membrane protein%2C len: 302 aa%3B similar to TR:CAB55533 (EMBL:Y07706) Streptomyces coelicolor inner membrane protein MalF%2C 300 aa%3B fasta scores: opt: 493 z-score: 600.8 E(): 4.3e-26%3B 32.6%25 identity in 291 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C binding-protein-dependent transport systems inner membrane component and a prosite match to entry PS00402 binding-protein-dependent transport systems inner membrane component signature;gbkey=CDS;gene=SCF11.12;product=sugar transporter membrane protein;protein_id=NP_624846.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	564699	564932	.	+	.	ID=id565;Dbxref=GeneID:1095955;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 55.40%2C E-value 1.3e-12;gbkey=misc_feature;gene=SCF11.12
NC_003888.3	RefSeq	sequence_feature	564702	564788	.	+	.	ID=id566;Dbxref=GeneID:1095955;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF11.12
NC_003888.3	RefSeq	gene	565046	565903	.	+	.	ID=gene519;Dbxref=GeneID:1095956;Name=SCF11.13;gbkey=Gene;gene=SCF11.13;gene_biotype=protein_coding;gene_synonym=SCF11.13;locus_tag=SCO0533
NC_003888.3	RefSeq	CDS	565046	565903	.	+	0	ID=cds502;Parent=gene519;Dbxref=Genbank:NP_624847.1,GeneID:1095956;Name=NP_624847.1;Note=SCF11.13%2C possible sugar transporter membrane protein%2C len: 285 aa%3B similar to TR:CAB46387 (EMBL:AL096743) Streptomyces coelicolor integral membrane transport protein MalG%2C 296 aa%3B fasta scores: opt: 538 z-score: 675.0 E(): 3.2e-30%3B 33.7%25 identity in 279 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C binding-protein-dependent transport systems inner membrane component and prosite match to entry PS00402 binding-protein-dependent transport systems inner membrane component signature;gbkey=CDS;gene=SCF11.13;product=sugar transporter membrane protein;protein_id=NP_624847.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	565547	565774	.	+	.	ID=id567;Dbxref=GeneID:1095956;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 55.20%2C E-value 1.4e-12;gbkey=misc_feature;gene=SCF11.13
NC_003888.3	RefSeq	sequence_feature	565550	565636	.	+	.	ID=id568;Dbxref=GeneID:1095956;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF11.13
NC_003888.3	RefSeq	ribosome_entry_site	565996	565999	.	+	.	ID=id569;gbkey=RBS
NC_003888.3	RefSeq	gene	566007	567626	.	+	.	ID=gene520;Dbxref=GeneID:1095957;Name=SCF11.14;gbkey=Gene;gene=SCF11.14;gene_biotype=protein_coding;gene_synonym=SCF11.14;locus_tag=SCO0534
NC_003888.3	RefSeq	CDS	566007	567626	.	+	0	ID=cds503;Parent=gene520;Dbxref=Genbank:NP_624848.1,GeneID:1095957;Name=NP_624848.1;Note=SCF11.14%2C possible beta-hexosaminidase (hypothetical protein)%2C len: 539 aa%3B similar to TR:Q9ZH39 (EMBL:AF072374) Pseudoalteromonas sp. S9 beta-N-acetylglucosaminidase%2C 783 aa%3B fasta scores: opt: 1097 z-score: 1169.9 E(): 0%3B 36.6%25 identity in 527 aa overlap and SW:HEX1_VIBFU (EMBL:U41417) Vibrio furnissii beta-hexosaminidase (EC 3.2.1.52) (N-acetyl-beta-glucosaminidase) (beta-N-acetylhexosaminidase) ExoI: fasta scores: opt: 783 z-score: 836.7 E(): 0%3B 34.1%25 identity in 478 aa overlap. Contains Pfam match to entry PF00728 glyco_hydro_20%2C glycosyl hydrolase family 20;gbkey=CDS;gene=SCF11.14;product=beta-hexosaminidase;protein_id=NP_624848.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	566238	566768	.	+	.	ID=id570;Dbxref=GeneID:1095957;Note=Pfam match to entry PF00728 Glyco_hydro_20%2C Glycosyl hydrolase family 20%2C score 120.40%2C E-value 3.4e-32;gbkey=misc_feature;gene=SCF11.14
NC_003888.3	RefSeq	sequence_feature	566730	566747	.	+	.	ID=id571;Dbxref=GeneID:1095957;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide;gbkey=misc_feature;gene=SCF11.14
NC_003888.3	RefSeq	gene	567623	569044	.	+	.	ID=gene521;Dbxref=GeneID:1095958;Name=SCF11.15;gbkey=Gene;gene=SCF11.15;gene_biotype=protein_coding;gene_synonym=SCF11.15;locus_tag=SCO0535
NC_003888.3	RefSeq	CDS	567623	569044	.	+	0	ID=cds504;Parent=gene521;Dbxref=Genbank:NP_624849.1,GeneID:1095958;Name=NP_624849.1;Note=SCF11.15%2C possible hydrolase (hypothetical protein)%2C len: 473 aa%3B similar to TR:AAD30364 (EMBL:AF078737) Caldicellulosiruptor sp. Tok7B.1 xylanase/endoglucanase%2C CelB%2C 1426 aa%3B fasta scores: opt: 484 z-score: 506.2 E(): 7.9e-21%3B 33.0%25 identity in 327 aa overlap. Contains a Pfam match to entry PF00942 CBD_3%2C cellulose binding domain. Contains possible n-terminal region signal sequence peptide;gbkey=CDS;gene=SCF11.15;product=hydrolase;protein_id=NP_624849.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	567743	567994	.	+	.	ID=id572;Dbxref=GeneID:1095958;Note=Pfam match to entry PF00942 CBD_3%2C Cellulose binding domain%2C score 95.20%2C E-value 1.3e-24;gbkey=misc_feature;gene=SCF11.15
NC_003888.3	RefSeq	gene	569061	569282	.	-	.	ID=gene522;Dbxref=GeneID:1095959;Name=SCF11.16c;gbkey=Gene;gene=SCF11.16c;gene_biotype=protein_coding;gene_synonym=SCF11.16c;locus_tag=SCO0536
NC_003888.3	RefSeq	CDS	569061	569282	.	-	0	ID=cds505;Parent=gene522;Dbxref=Genbank:NP_624850.1,GeneID:1095959;Name=NP_624850.1;Note=SCF11.16c%2C unknown%2C len: 73 aa;gbkey=CDS;gene=SCF11.16c;product=hypothetical protein;protein_id=NP_624850.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	569292	569296	.	-	.	ID=id573;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	569643	569646	.	+	.	ID=id574;gbkey=RBS
NC_003888.3	RefSeq	gene	569655	570482	.	+	.	ID=gene523;Dbxref=GeneID:1095960;Name=SCF11.17;gbkey=Gene;gene=SCF11.17;gene_biotype=protein_coding;gene_synonym=SCF11.17;locus_tag=SCO0537
NC_003888.3	RefSeq	CDS	569655	570482	.	+	0	ID=cds506;Parent=gene523;Dbxref=Genbank:NP_624851.1,GeneID:1095960;Name=NP_624851.1;Note=SCF11.17%2C hypothetical hypothetical protein%2C len: 275 aa%3B highly similar to TR:P95755 (EMBL:D89734) Streptomyces griseus hypothetical protein adjacent to SgaA%2C 258 aa%3B fasta scores: opt: 858 z-score: 936.4 E(): 0%3B 54.9%25 identity in 264 aa overlap and to TR:CAB51262 (EMBL:AL096872) Streptomyces coelicolor endo alpha-1%2C4 polygalactosaminidase SC5F7.23c%2C 282 aa%3B fasta scores: opt: 303 z-score: 336.5 E(): 2.3e-11%3B 33.6%25 identity in 223 aa overlap. Contains probable N-terminal signal sequence;gbkey=CDS;gene=SCF11.17;product=hypothetical protein;protein_id=NP_624851.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	570511	570514	.	+	.	ID=id575;gbkey=RBS
NC_003888.3	RefSeq	gene	570520	571848	.	+	.	ID=gene524;Dbxref=GeneID:1095961;Name=SCF11.18;gbkey=Gene;gene=SCF11.18;gene_biotype=protein_coding;gene_synonym=SCF11.18;locus_tag=SCO0538
NC_003888.3	RefSeq	CDS	570520	571848	.	+	0	ID=cds507;Parent=gene524;Dbxref=Genbank:NP_624852.1,GeneID:1095961;Name=NP_624852.1;Note=SCF11.18%2C probable sugar transporter sugar binding lipoprotein%2C len: 449 aa%3B similar to TR:AAD35680 (EMBL:AE001734) Thermotoga maritima sugar ABC transporter periplasmic sugar-binding protein TM0595%2C 419 aa%3B fasta scores: opt: 333 z-score: 361.2 E(): 9.5e-13%3B 24.1%25 identity in 406 aa overlap. Contains a Pfam match to entry PF01547 SBP_bacterial_1%2C bacterial extracellular solute-binding protein and probable N-terminal signal sequence;gbkey=CDS;gene=SCF11.18;product=sugar transporter sugar binding lipoprotein;protein_id=NP_624852.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	570976	571827	.	+	.	ID=id576;Dbxref=GeneID:1095961;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 91.70%2C E-value 1.4e-23;gbkey=misc_feature;gene=SCF11.18
NC_003888.3	RefSeq	ribosome_entry_site	571848	571852	.	+	.	ID=id577;gbkey=RBS
NC_003888.3	RefSeq	gene	571863	572813	.	+	.	ID=gene525;Dbxref=GeneID:1095962;Name=SCF11.19;gbkey=Gene;gene=SCF11.19;gene_biotype=protein_coding;gene_synonym=SCF11.19;locus_tag=SCO0539
NC_003888.3	RefSeq	CDS	571863	572813	.	+	0	ID=cds508;Parent=gene525;Dbxref=Genbank:NP_624853.1,GeneID:1095962;Name=NP_624853.1;Note=SCF11.19%2C probable sugar transporter membrane protein%2C len: 316 aa%3B similar to TR:CAB52981 (EMBL:AL109950) Streptomyces coelicolor integral membrane permease%2C 319 aa%3B fasta scores: opt: 606 z-score: 689.2 E(): 5.1e-31%3B 34.9%25 identity in 312 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C binding-protein-dependent transport systems inner membrane component and a prosite match to entry PS00402 binding-protein-dependent transport systems inner membrane component signature. Contains probable N-terminal signal sequence;gbkey=CDS;gene=SCF11.19;product=sugar transporter membrane protein;protein_id=NP_624853.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	572451	572684	.	+	.	ID=id578;Dbxref=GeneID:1095962;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 61.30%2C E-value 2.1e-14;gbkey=misc_feature;gene=SCF11.19
NC_003888.3	RefSeq	sequence_feature	572454	572540	.	+	.	ID=id579;Dbxref=GeneID:1095962;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF11.19
NC_003888.3	RefSeq	gene	572810	573709	.	+	.	ID=gene526;Dbxref=GeneID:1095963;Name=SCF11.20;gbkey=Gene;gene=SCF11.20;gene_biotype=protein_coding;gene_synonym=SCF11.20;locus_tag=SCO0540
NC_003888.3	RefSeq	CDS	572810	573709	.	+	0	ID=cds509;Parent=gene526;Dbxref=Genbank:NP_624854.1,GeneID:1095963;Name=NP_624854.1;Note=SCF11.20%2C probable sugar transport membrane protein%2C len: 299 aa%3B similar to TR:Q06111 (EMBL:X66092) Clostridium perfringens  transport system permease%2C 275 aa%3B fasta scores: opt: 704 z-score: 838.6 E(): 0%3B 38.4%25 identity in 255 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C binding-protein-dependent transport systems inner membrane component and a prosite match to entry PS00402 binding-protein-dependent transport systems inner membrane component signature. Contains porbable N-terminal signal sequence;gbkey=CDS;gene=SCF11.20;product=sugar transport membrane protein;protein_id=NP_624854.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	573356	573586	.	+	.	ID=id580;Dbxref=GeneID:1095963;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 66.80%2C E-value 4.6e-16;gbkey=misc_feature;gene=SCF11.20
NC_003888.3	RefSeq	sequence_feature	573359	573445	.	+	.	ID=id581;Dbxref=GeneID:1095963;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCF11.20
NC_003888.3	RefSeq	gene	573756	575081	.	+	.	ID=gene527;Dbxref=GeneID:1095964;Name=SCF11.21;gbkey=Gene;gene=SCF11.21;gene_biotype=protein_coding;gene_synonym=SCF11.21;locus_tag=SCO0541
NC_003888.3	RefSeq	CDS	573756	575081	.	+	0	ID=cds510;Parent=gene527;Dbxref=Genbank:NP_624855.1,GeneID:1095964;Name=NP_624855.1;Note=SCF11.21%2C probable alpha-galactosidase%2C len: 441 aa%3B similar to SW:AGAL_BACSU (EMBL:AF008220) Bacillus subtilis alpha-galactosidase (EC 3.2.1.22) (Melibiase) MelA%2C 432 aa%3B fasta scores: opt: 1068 z-score: 1240.5 E(): 0%3B 39.3%25 identity in 427 aa overlap;gbkey=CDS;gene=SCF11.21;product=alpha-galactosidase;protein_id=NP_624855.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	575097	575144	.	+	.	ID=id582;gbkey=stem_loop
NC_003888.3	RefSeq	gene	575351	577984	.	+	.	ID=gene528;Dbxref=GeneID:1095965;Name=SCF11.22;gbkey=Gene;gene=SCF11.22;gene_biotype=protein_coding;gene_synonym=SCF11.22;locus_tag=SCO0542
NC_003888.3	RefSeq	CDS	575351	577984	.	+	0	ID=cds511;Parent=gene528;Dbxref=Genbank:NP_624856.1,GeneID:1095965;Name=NP_624856.1;Note=SCF11.22%2C hypothetical regulatory protein%2C len: 877 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB44382 (EMBL:AL078610) Streptomyces coelicolor hypothetical 66.2 KD protein%2C 634 aa%3B fasta scores: opt: 1072 z-score: 1125.7 E(): 0%3B 38.2%25 identity in 678 aa overlap and to SW:RSBU_BACSU (EMBL:L35574) Bacillus subtilis sigma factor sibG regulation protein RsbU%2C 335 aa%3B fasta scores: opt: 211 z-score: 225.9 E(): 3.2e-05%3B 25.6%25 identity in 250 aa overlap. Contains Pfam matches to entries PF00989 PAS%2C PAS domain and PF01590 GAF%2C GAF domain;gbkey=CDS;gene=SCF11.22;product=regulatory protein;protein_id=NP_624856.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	576287	576445	.	+	.	ID=id583;Dbxref=GeneID:1095965;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 28.50%2C E-value 2.1e-06;gbkey=misc_feature;gene=SCF11.22
NC_003888.3	RefSeq	sequence_feature	576788	577255	.	+	.	ID=id584;Dbxref=GeneID:1095965;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 41.70%2C E-value 1.6e-08;gbkey=misc_feature;gene=SCF11.22
NC_003888.3	RefSeq	gene	578092	579228	.	+	.	ID=gene529;Dbxref=GeneID:1095966;Name=SCF11.23;gbkey=Gene;gene=SCF11.23;gene_biotype=protein_coding;gene_synonym=SCF11.23;locus_tag=SCO0543
NC_003888.3	RefSeq	CDS	578092	579228	.	+	0	ID=cds512;Parent=gene529;Dbxref=Genbank:NP_624857.1,GeneID:1095966;Name=NP_624857.1;Note=SCF11.23%2C possible peptidase%2C len: 412 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB39706 (EMBL:AL049485) Streptomyces coelicolor  peptidase%2C 312 aa%3B fasta scores: opt: 307 z-score: 329.3 E(): 5.7e-11%3B 34.3%25 identity in 201 aa overlap. Contains Pfam match to entry PF01551 peptidase_M37%2C peptidase family M23/M37. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCF11.23;product=peptidase;protein_id=NP_624857.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	578947	579207	.	+	.	ID=id585;Dbxref=GeneID:1095966;Note=Pfam match to entry PF01551 Peptidase_M37%2C Peptidase family M23/M37%2C score 111.30%2C E-value 1.8e-29;gbkey=misc_feature;gene=SCF11.23
NC_003888.3	RefSeq	gene	579257	580789	.	+	.	ID=gene530;Dbxref=GeneID:1095967;Name=SCF11.24;gbkey=Gene;gene=SCF11.24;gene_biotype=protein_coding;gene_synonym=SCF11.24;locus_tag=SCO0544
NC_003888.3	RefSeq	CDS	579257	580789	.	+	0	ID=cds513;Parent=gene530;Dbxref=Genbank:NP_624858.1,GeneID:1095967;Name=NP_624858.1;Note=SCF11.24%2C hypothetical hypothetical protein%2C len: 510 aa%3B similar to various hypothetical proteins%2C e.g. SW:YM26_MYCTU (EMBL:Z70692) Mycobacterium tuberculosis hypothetical 56.3 KD protein RV2226%2C 513 aa%3B fasta scores: opt: 867 z-score: 952.2 E(): 0%3B 39.0%25 identity in 515 aa overlap. Contains probable N-terminal signal sequence;gbkey=CDS;gene=SCF11.24;product=hypothetical protein;protein_id=NP_624858.1;transl_table=11
NC_003888.3	RefSeq	gene	580913	583459	.	+	.	ID=gene531;Dbxref=GeneID:1095968;Name=SCF11.25;gbkey=Gene;gene=SCF11.25;gene_biotype=protein_coding;gene_synonym=SCF11.25;locus_tag=SCO0545
NC_003888.3	RefSeq	CDS	580913	583459	.	+	0	ID=cds514;Parent=gene531;Dbxref=Genbank:NP_624859.1,GeneID:1095968;Name=NP_624859.1;Note=SCF11.25%2C possible hypothetical protein%2C len: 843 aa%3B similar to TR:O87849 (EMBL:AL031013) Streptomyces coelicolor hypothetical protein%2C 602 aa%3B fasta scores: opt: 2859 z-score: 3026.4 E(): 0%3B 72.1%25 identity in 555 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SCF11.25;product=hypothetical protein;protein_id=NP_624859.1;transl_table=11
NC_003888.3	RefSeq	gene	583523	586897	.	-	.	ID=gene532;Dbxref=GeneID:1095969;Name=pyc;gbkey=Gene;gene=pyc;gene_biotype=protein_coding;gene_synonym=pyc,SCF11.26c;locus_tag=SCO0546
NC_003888.3	RefSeq	CDS	583523	586897	.	-	0	ID=cds515;Parent=gene532;Dbxref=Genbank:NP_624860.1,GeneID:1095969;Name=NP_624860.1;Note=biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate;gbkey=CDS;gene=pyc;product=pyruvate carboxylase;protein_id=NP_624860.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	583529	583729	.	-	.	ID=id586;Dbxref=GeneID:1095969;Note=Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C score 57.00%2C E-value 4.2e-13;gbkey=misc_feature;gene=pyc
NC_003888.3	RefSeq	sequence_feature	584453	585310	.	-	.	ID=id587;Dbxref=GeneID:1095969;Note=Pfam match to entry PF00682 HMGL-like%2C HMGL-like%2C score 146.30%2C E-value 5.2e-40;gbkey=misc_feature;gene=pyc
NC_003888.3	RefSeq	sequence_feature	585560	586888	.	-	.	ID=id588;Dbxref=GeneID:1095969;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 600.30%2C E-value 1.1e-176;gbkey=misc_feature;gene=pyc
NC_003888.3	RefSeq	sequence_feature	586019	586042	.	-	.	ID=id589;Dbxref=GeneID:1095969;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=pyc
NC_003888.3	RefSeq	gene	586987	587988	.	-	.	ID=gene533;Dbxref=GeneID:1095970;Name=SCF11.27c;gbkey=Gene;gene=SCF11.27c;gene_biotype=protein_coding;gene_synonym=SCF11.27c;locus_tag=SCO0547
NC_003888.3	RefSeq	CDS	586987	587988	.	-	0	ID=cds516;Parent=gene533;Dbxref=Genbank:NP_624861.1,GeneID:1095970;Name=NP_624861.1;Note=SCF11.27c%2C possible acyltransferase%2C len: 333 aa%3B similar to TR:CAB52353 (EMBL:AL109747) Streptomyces coelicolor multi-domain beta keto-acyl synthase%2C 2082 aa%3B fasta scores: opt: 402 z-score: 416.4 E(): 8e-16%3B 32.5%25 identity in 329 aa overlap%2C and to TR:Q55226 (EMBL:L34880) Streptomyces sp. acyltransferase DauA%2C 338 aa%3B fasta scores: opt: 326 z-score: 349.0 E(): 4.5e-12%3B 33.4%25 identity in 326 aa overlap. Contains Pfam match to entry PF00698 acyl_transf%2C acyl transferase domain;gbkey=CDS;gene=SCF11.27c;product=acyltransferase;protein_id=NP_624861.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	586996	587946	.	-	.	ID=id590;Dbxref=GeneID:1095970;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score -19.70%2C E-value 8.8e-09;gbkey=misc_feature;gene=SCF11.27c
NC_003888.3	RefSeq	gene	587985	589271	.	-	.	ID=gene534;Dbxref=GeneID:1095971;Name=fabB2;gbkey=Gene;gene=fabB2;gene_biotype=protein_coding;gene_synonym=fabB2,SCF11.28c;locus_tag=SCO0548
NC_003888.3	RefSeq	CDS	587985	589271	.	-	0	ID=cds517;Parent=gene534;Dbxref=Genbank:NP_624862.1,GeneID:1095971;Name=NP_624862.1;gbkey=CDS;gene=fabB2;product=3-oxoacyl-ACP synthase;protein_id=NP_624862.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	587991	589226	.	-	.	ID=id591;Dbxref=GeneID:1095971;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 110.50%2C E-value 3.2e-29;gbkey=misc_feature;gene=fabB2
NC_003888.3	RefSeq	gene	589268	589546	.	-	.	ID=gene535;Dbxref=GeneID:1095972;Name=SCF11.29c;gbkey=Gene;gene=SCF11.29c;gene_biotype=protein_coding;gene_synonym=SCF11.29c;locus_tag=SCO0549
NC_003888.3	RefSeq	CDS	589268	589546	.	-	0	ID=cds518;Parent=gene535;Dbxref=Genbank:NP_624863.1,GeneID:1095972;Name=NP_624863.1;gbkey=CDS;gene=SCF11.29c;product=acyl carrier protein;protein_id=NP_624863.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	589307	589504	.	-	.	ID=id592;Dbxref=GeneID:1095972;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 59.90%2C E-value 6.1e-15;gbkey=misc_feature;gene=SCF11.29c
NC_003888.3	RefSeq	ribosome_entry_site	589555	589558	.	-	.	ID=id593;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	590003	590006	.	+	.	ID=id594;gbkey=RBS
NC_003888.3	RefSeq	gene	590017	590895	.	+	.	ID=gene536;Dbxref=GeneID:1095973;Name=SCF11.30;gbkey=Gene;gene=SCF11.30;gene_biotype=protein_coding;gene_synonym=SCF11.30;locus_tag=SCO0550
NC_003888.3	RefSeq	CDS	590017	590895	.	+	0	ID=cds519;Parent=gene536;Dbxref=Genbank:NP_624864.1,GeneID:1095973;Name=NP_624864.1;Note=SCF11.30%2C possible membrane protein%2C len: 292 aa%3B similar to TR:Q9ZBQ4 (EMBL:AL034447) Streptomyces coelicolor transmembrane protein%2C 396 aa%3B fasta scores: opt: 677 z-score: 505.6 E(): 8.6e-21%3B 43.7%25 identity in 309 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCF11.30;product=hypothetical protein;protein_id=NP_624864.1;transl_table=11
NC_003888.3	RefSeq	gene	590981	592309	.	-	.	ID=gene537;Dbxref=GeneID:1095974;Name=SCF11.31c;gbkey=Gene;gene=SCF11.31c;gene_biotype=protein_coding;gene_synonym=SCF11.31c;locus_tag=SCO0551
NC_003888.3	RefSeq	CDS	590981	592309	.	-	0	ID=cds520;Parent=gene537;Dbxref=Genbank:NP_624865.1,GeneID:1095974;Name=NP_624865.1;Note=SCF11.31c%2C possible histidine kinase%2C len: 442 aa%3B similar to TR:O50497 (EMBL:AL020958) Streptomyces coelicolor two-component system sensor%2C 481 aa%3B fasta scores: opt: 401 z-score: 451.3 E(): 9e-18%3B 30.2%25 identity in 367 aa overlap. Contains Pfam matches to entries PF00512 signal%2C histidine kinase and PF00672 DUF5%2C domain found in bacterial signal proteins. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCF11.31c;product=histidine kinase;protein_id=NP_624865.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	591020	591622	.	-	.	ID=id595;Dbxref=GeneID:1095974;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 39.60%2C E-value 7.1e-08;gbkey=misc_feature;gene=SCF11.31c
NC_003888.3	RefSeq	sequence_feature	591662	591871	.	-	.	ID=id596;Dbxref=GeneID:1095974;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 36.90%2C E-value 4.5e-07;gbkey=misc_feature;gene=SCF11.31c
NC_003888.3	RefSeq	gene	592306	593022	.	-	.	ID=gene538;Dbxref=GeneID:1095975;Name=SCF11.32c;gbkey=Gene;gene=SCF11.32c;gene_biotype=protein_coding;gene_synonym=SCF11.32c;locus_tag=SCO0552
NC_003888.3	RefSeq	CDS	592306	593022	.	-	0	ID=cds521;Parent=gene538;Dbxref=Genbank:NP_624866.1,GeneID:1095975;Name=NP_624866.1;Note=SCF11.32c%2C possible response regulator%2C len: 238 aa%3B similar to TR:CAB54568 (EMBL:AJ006392) Streptococcus pneumoniae response regulator Rro2%2C 234 aa%3B fasta scores: opt: 583 z-score: 693.9 E(): 2.8e-31%3B 43.2%25 identity in 227 aa overlap. Contains Pfam matches to entries PF00486 trans_reg_C%2C transcriptional regulatory protein and PF00072 response_reg%2C response regulator receiver domain;gbkey=CDS;gene=SCF11.32c;product=response regulator;protein_id=NP_624866.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	592330	592545	.	-	.	ID=id597;Dbxref=GeneID:1095975;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 93.00%2C E-value 1.7e-26;gbkey=misc_feature;gene=SCF11.32c
NC_003888.3	RefSeq	sequence_feature	592660	592992	.	-	.	ID=id598;Dbxref=GeneID:1095975;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 123.00%2C E-value 5.6e-33;gbkey=misc_feature;gene=SCF11.32c
NC_003888.3	RefSeq	ribosome_entry_site	593040	593043	.	-	.	ID=id599;gbkey=RBS
NC_003888.3	RefSeq	gene	593049	593486	.	-	.	ID=gene539;Dbxref=GeneID:1095976;Name=SCF11.33c;gbkey=Gene;gene=SCF11.33c;gene_biotype=protein_coding;gene_synonym=SCF11.33c;locus_tag=SCO0553
NC_003888.3	RefSeq	CDS	593049	593486	.	-	0	ID=cds522;Parent=gene539;Dbxref=Genbank:NP_624867.1,GeneID:1095976;Name=NP_624867.1;Note=SCF11.33c%2C unknown%2C len: 145 aa;gbkey=CDS;gene=SCF11.33c;product=hypothetical protein;protein_id=NP_624867.1;transl_table=11
NC_003888.3	RefSeq	gene	593641	595338	.	-	.	ID=gene540;Dbxref=GeneID:1095977;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;gene_synonym=manA,SCF11.34c;locus_tag=SCO0554
NC_003888.3	RefSeq	CDS	593641	595338	.	-	0	ID=cds523;Parent=gene540;Dbxref=Genbank:NP_733506.1,GeneID:1095977;Name=NP_733506.1;Note=SCF73.01c%2C manA%2C probable  beta-mannosidase%2C len: 327 aa%3B similar to many e.g. MANA_STRLI P51529 mannan endo-1%2C4-beta-mannosidase precursor (EC 3.2.1.78) (363 aa)%2C fasta scores%3B opt: 1189 z-score: 1332.7 E(): 0%2C 61.1%25 identity in 288 aa overlap. Contains N-terminal signal sequence%2C and Pfam match to entry PF00150 cellulase%2C Cellulase (glycosyl hydrolase family 5). Also similar to SC2H4.16 (62.2%25 identity in 288 aa overlap)~SCF11.34c%2C possible sugar hydrolase%2C partial CDS%2C len: >278 aa%3B C-teminus similar to SW:GUN4_THEFU (EMBL:L20093) Thermomonospora fusca endoglucanase E-4 precursor (EC 3.2.1.4) (endo-1%2C4-beta-glucanase E-4)%2C CelD%2C 880 aa%3B fasta scores: opt: 544 z-score: 555.0 E(): 1.5e-23%3B 42.8%25 identity in 215 aa overlap. Contains Pfam matches to entries PF00553 CBD_2%2C cellulose binding domain and PF00041 fn3%2C fibronectin type III domain. Overlaps with Streptomyces coelicolor StF73.01c%2C len: >327 aa%3B C-terminus similar to many e.g. MANA_STRLI P51529 mannan endo-1%2C4-beta-mannosidase precursor (EC 3.2.1.78) (363 aa)%2C fasta scores%3B opt: 1189 z-score: 1332.7 E(): 0%2C 61.1%25 identity in 288 aa overlap. Contains N-terminal signal sequence%2C and Pfam match to entry PF00150 cellulase%2C Cellulase (glycosyl hydrolase family 5);gbkey=CDS;gene=manA;product=beta-mannosidase;protein_id=NP_733506.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	593653	593955	.	-	.	ID=id600;Dbxref=GeneID:1095977;Note=Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain%2C score 118.60%2C E-value 3e-33;gbkey=misc_feature;gene=manA
NC_003888.3	RefSeq	sequence_feature	594004	594249	.	-	.	ID=id601;Dbxref=GeneID:1095977;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 63.70%2C E-value 4.1e-15;gbkey=misc_feature;gene=manA
NC_003888.3	RefSeq	ribosome_entry_site	595344	595347	.	-	.	ID=id602;gbkey=RBS
NC_003888.3	RefSeq	gene	595484	597079	.	-	.	ID=gene541;Dbxref=GeneID:1095978;Name=SCF73.02c;gbkey=Gene;gene=SCF73.02c;gene_biotype=protein_coding;gene_synonym=SCF73.02c;locus_tag=SCO0555
NC_003888.3	RefSeq	CDS	595484	597079	.	-	0	ID=cds524;Parent=gene541;Dbxref=Genbank:NP_624868.1,GeneID:1095978;Name=NP_624868.1;Note=SCF73.02c%2C possible membrane-bound oxidoreductase%2C len: 531 aa%3B some similarity to eukaryotic molybdenum-containing oxidoreductases e.g. SUOX_RAT Q07116 sulfite oxidase precursor (488 aa)%2C fasta scores%3B opt: 262 z-score: 281.9 E(): 2.5e-08%2C 30.4%25 identity in 319 aa overlap%2C and NIA1_ORYSA nitrate reductase 1 (916 aa)%2C fasta scores%3B opt: 247 z-score: 262.1 E(): 3.1e-07%2C 28.9%25 identity in 336 aa overlap. Contains several membrane spanning hydrophobic domains near N-terminus%2C and Pfam match to entry PF00174 oxidored_molyb%2C Oxidoreductase molybdopterin binding domain;gbkey=CDS;gene=SCF73.02c;product=membrane-bound oxidoreductase;protein_id=NP_624868.1;transl_table=11
NC_003888.3	RefSeq	gene	597132	598655	.	-	.	ID=gene542;Dbxref=GeneID:1095979;Name=SCF73.03c;gbkey=Gene;gene=SCF73.03c;gene_biotype=protein_coding;gene_synonym=SCF73.03c;locus_tag=SCO0556
NC_003888.3	RefSeq	CDS	597132	598655	.	-	0	ID=cds525;Parent=gene542;Dbxref=Genbank:NP_624869.1,GeneID:1095979;Name=NP_624869.1;Note=SCF73.03c%2C unknown%2C len: 507 aa;gbkey=CDS;gene=SCF73.03c;product=hypothetical protein;protein_id=NP_624869.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	598666	598670	.	-	.	ID=id603;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	598737	598742	.	+	.	ID=id604;gbkey=RBS
NC_003888.3	RefSeq	gene	598747	599769	.	+	.	ID=gene543;Dbxref=GeneID:1095980;Name=SCF73.04;gbkey=Gene;gene=SCF73.04;gene_biotype=protein_coding;gene_synonym=SCF73.04;locus_tag=SCO0557
NC_003888.3	RefSeq	CDS	598747	599769	.	+	0	ID=cds526;Parent=gene543;Dbxref=Genbank:NP_624870.1,GeneID:1095980;Name=NP_624870.1;Note=SCF73.04%2C probable transcriptional regulator%2C len: 340 aa%3B similar in N-terminus to members of the MerR family e.g. NOLA_BRASN nodulation protein NOLA (237 aa)%2C fasta scores%3B opt: 211 z-score: 233.9 E(): 1.2e-05%2C 48.5%25 identity in 68 aa overlap. Also similar to SCD17.06c (34.8%25 identity in 322 aa overlap). Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family;gbkey=CDS;gene=SCF73.04;product=MerR family transcriptional regulator;protein_id=NP_624870.1;transl_table=11
NC_003888.3	RefSeq	gene	599712	599978	.	-	.	ID=gene544;Dbxref=GeneID:1095981;Name=SCF73.05c;gbkey=Gene;gene=SCF73.05c;gene_biotype=protein_coding;gene_synonym=SCF73.05c;locus_tag=SCO0558
NC_003888.3	RefSeq	CDS	599712	599978	.	-	0	ID=cds527;Parent=gene544;Dbxref=Genbank:NP_624871.1,GeneID:1095981;Name=NP_624871.1;Note=SCF73.05c%2C unknown%2C len: 88 aa;gbkey=CDS;gene=SCF73.05c;product=hypothetical protein;protein_id=NP_624871.1;transl_table=11
NC_003888.3	RefSeq	gene	600051	601052	.	-	.	ID=gene545;Dbxref=GeneID:1095982;Name=SCF73.06c;gbkey=Gene;gene=SCF73.06c;gene_biotype=protein_coding;gene_synonym=SCF73.06c;locus_tag=SCO0559
NC_003888.3	RefSeq	CDS	600051	601052	.	-	0	ID=cds528;Parent=gene545;Dbxref=Genbank:NP_624872.1,GeneID:1095982;Name=NP_624872.1;Note=SCF73.06c%2C unknown%2C len: 333 aa;gbkey=CDS;gene=SCF73.06c;product=hypothetical protein;protein_id=NP_624872.1;transl_table=11
NC_003888.3	RefSeq	gene	601133	603355	.	-	.	ID=gene546;Dbxref=GeneID:1095983;Name=cpeB;gbkey=Gene;gene=cpeB;gene_biotype=protein_coding;gene_synonym=cpeB;locus_tag=SCO0560
NC_003888.3	RefSeq	CDS	601133	603355	.	-	0	ID=cds529;Parent=gene546;Dbxref=Genbank:NP_624873.1,GeneID:1095983;Name=NP_624873.1;Note=SCF73.07c%2C cpeB%2C catalase/peroxidase%2C len: 740 aa%3B highly similar to TR:O87864 (EMBL:Y14317) Streptomyces reticuli catalase/peroxidase (EC 1.11.1.6) (740 aa)%2C fasta scores%3B opt: 4603 z-score: 5243.8 E(): 0%2C 90.5%25 identity in 739 aa overlap%2C and similar to many e.g. CATA_MYCBO peroxidase/catalase (EC 1.11.1.6) (740 aa)%2C fasta scores%3B opt: 3432 z-score: 3909.0 E(): 0%2C 66.7%25 identity in 744 aa overlap. Contains PS00436 Peroxidases active site signature%2C PS00435 Peroxidases proximal heme-ligand signature%2C PS00017 ATP/GTP-binding site motif A (P-loop)%2C and Pfam match to entry PF00141 peroxidase;gbkey=CDS;gene=cpeB;product=catalase/peroxidase;protein_id=NP_624873.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	602525	602548	.	-	.	ID=id605;Dbxref=GeneID:1095983;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cpeB
NC_003888.3	RefSeq	sequence_feature	602534	602566	.	-	.	ID=id606;Dbxref=GeneID:1095983;Note=PS00435 Peroxidases proximal heme-ligand signature;gbkey=misc_feature;gene=cpeB
NC_003888.3	RefSeq	sequence_feature	603023	603058	.	-	.	ID=id607;Dbxref=GeneID:1095983;Note=PS00436 Peroxidases active site signature;gbkey=misc_feature;gene=cpeB
NC_003888.3	RefSeq	ribosome_entry_site	603366	603370	.	-	.	ID=id608;gbkey=RBS
NC_003888.3	RefSeq	gene	603385	603840	.	-	.	ID=gene547;Dbxref=GeneID:1095984;Name=furS;gbkey=Gene;gene=furS;gene_biotype=protein_coding;gene_synonym=furS,SCF73.08c;locus_tag=SCO0561
NC_003888.3	RefSeq	CDS	603385	603840	.	-	0	ID=cds530;Parent=gene547;Dbxref=Genbank:NP_624874.1,GeneID:1095984;Name=NP_624874.1;Note=SCF73.08c%2C furS%2C Fe regulatory protein%2C len: 151 aa%3B identical to TR:CAB38251 (EMBL:AJ132989) S. coelicolor Fe regulatory protein (151 aa)%2C highly similar to e.g. FUR_MYCTU ferric uptake regulation protein (147 aa)%2C fasta scores%3B opt: 613 z-score: 742.2 E(): 0%2C 64.8%25 identity in 142 aa overlap. Contains Pfam match to entry PF01475 FUR%2C Ferric uptake regulator family;gbkey=CDS;gene=furS;product=Fe regulatory protein;protein_id=NP_624874.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	603854	603857	.	-	.	ID=id609;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	603958	603960	.	+	.	ID=id610;gbkey=RBS
NC_003888.3	RefSeq	gene	603973	605085	.	+	.	ID=gene548;Dbxref=GeneID:1095985;Name=SCF73.09;gbkey=Gene;gene=SCF73.09;gene_biotype=protein_coding;gene_synonym=SCF73.09;locus_tag=SCO0562
NC_003888.3	RefSeq	CDS	603973	605085	.	+	0	ID=cds531;Parent=gene548;Dbxref=Genbank:NP_624875.1,GeneID:1095985;Name=NP_624875.1;Note=SCF73.09%2C probable integral membrane protein%2C len: 370 aa%3B similar to several hypothetical membrane proteins e.g. TR:O06378 (EMBL:) M. tuberculosis Rv3629c (365 aa)%2C fasta scores%3B opt: 439 z-score: 514.5 E(): 2.7e-21%2C 50.5%25 identity in 384 aa overlap;gbkey=CDS;gene=SCF73.09;product=hypothetical protein;protein_id=NP_624875.1;transl_table=11
NC_003888.3	RefSeq	gene	605122	606555	.	-	.	ID=gene549;Dbxref=GeneID:1095986;Name=SCF73.10c;gbkey=Gene;gene=SCF73.10c;gene_biotype=protein_coding;gene_synonym=SCF73.10c;locus_tag=SCO0563
NC_003888.3	RefSeq	CDS	605122	606555	.	-	0	ID=cds532;Parent=gene549;Dbxref=Genbank:NP_624876.1,GeneID:1095986;Name=NP_624876.1;Note=SCF73.10c%2C unknown%2C len: 477 aa%3B similar to TR:Q9RSL6 (EMBL:AE002046) from Deinococcus radiodurans fasta scores%3B opt: 1724%2C Z-score: 1902.8%2C 53.669%25 identity (54.468%25 ungapped) in 477 aa overlap.;gbkey=CDS;gene=SCF73.10c;product=hypothetical protein;protein_id=NP_624876.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	606565	606568	.	-	.	ID=id611;gbkey=RBS
NC_003888.3	RefSeq	gene	606677	607837	.	-	.	ID=gene550;Dbxref=GeneID:1095987;Name=SCF73.11c;gbkey=Gene;gene=SCF73.11c;gene_biotype=protein_coding;gene_synonym=SCF73.11c;locus_tag=SCO0564
NC_003888.3	RefSeq	CDS	606677	607837	.	-	0	ID=cds533;Parent=gene550;Dbxref=Genbank:NP_624877.1,GeneID:1095987;Name=NP_624877.1;Note=SCF73.11c%2C unknown%2C len: 386 aa%3B some similarity to hypothetical protein SC6A5.29 (401 aa)%2C fasta scores%3B opt: 403 z-score: 496.5 E(): 2.7e-20%2C 25.9%25 identity in 347 aa overlap;gbkey=CDS;gene=SCF73.11c;product=hypothetical protein;protein_id=NP_624877.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	607844	607848	.	-	.	ID=id612;gbkey=RBS
NC_003888.3	RefSeq	gene	607851	608909	.	-	.	ID=gene551;Dbxref=GeneID:1095988;Name=SCF73.12c;gbkey=Gene;gene=SCF73.12c;gene_biotype=protein_coding;gene_synonym=SCF73.12c;locus_tag=SCO0565
NC_003888.3	RefSeq	CDS	607851	608909	.	-	0	ID=cds534;Parent=gene551;Dbxref=Genbank:NP_624878.1,GeneID:1095988;Name=NP_624878.1;Note=SCF73.12c%2C probable polyprenyl synthetase%2C len: 352 aa%3B similar to members of the FPP/GGPP synthetases family e.g. GGPP_MYCTU probable geranylgeranyl pyrophosphate synthetase (359 aa)%2C fasta scores%3B opt: 253 z-score: 299.8 E(): 2.5e-09 30.1%25 identity in 346 aa overlap%2C and ISPB_ECOLI octaprenyl-diphosphate synthase (323 aa)%2C fasta scores%3B opt: 222 z-score: 264.3 E(): 2.4e-07%2C 30.0%25 identity in 337 aa overlap. Contains PS00444 Polyprenyl synthetases signature 2%2C and Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetases;gbkey=CDS;gene=SCF73.12c;product=polyprenyl synthetase;protein_id=NP_624878.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	608184	608222	.	-	.	ID=id613;Dbxref=GeneID:1095988;Note=PS00444 Polyprenyl synthetases signature 2;gbkey=misc_feature;gene=SCF73.12c
NC_003888.3	RefSeq	gene	608902	609186	.	-	.	ID=gene552;Dbxref=GeneID:1095989;Name=SCF73.13c;gbkey=Gene;gene=SCF73.13c;gene_biotype=protein_coding;gene_synonym=SCF73.13c;locus_tag=SCO0566
NC_003888.3	RefSeq	CDS	608902	609186	.	-	0	ID=cds535;Parent=gene552;Dbxref=Genbank:NP_624879.1,GeneID:1095989;Name=NP_624879.1;Note=SCF73.13c%2C probable membrane protein%2C len: 94 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCF73.13c;product=hypothetical protein;protein_id=NP_624879.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	609293	610393	.	+	.	ID=id614;Note=Insertion element;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	609293	609303	.	+	.	ID=id615;gbkey=repeat_region
NC_003888.3	RefSeq	gene	609517	610356	.	+	.	ID=gene553;Dbxref=GeneID:1095990;Name=SC8B3.01;gbkey=Gene;gene=SC8B3.01;gene_biotype=protein_coding;gene_synonym=SC8B3.01;locus_tag=SCO0567
NC_003888.3	RefSeq	CDS	609517	610356	.	+	0	ID=cds536;Parent=gene553;Dbxref=Genbank:NP_624880.1,GeneID:1095990;Name=NP_624880.1;Note=St8B3.01%2C insertion element transposase%2C len: 279 aa: similar to many e.g. TR:Q9Z9H3 (EMBL:AB024596) from Streptomyces coelicolor fasta scores%3B opt: 1839%2C Z-score: 2145.6%2C 99.642%25 identity (99.642%25 ungapped) in 279 aa overlap. Contains Pfam match to entry PF01675 Transposase_13%2C Transposase and Pfam match to entry PF01511 Transposase_6%2C Transposase.;gbkey=CDS;gene=SC8B3.01;product=insertion element transposase;protein_id=NP_624880.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	609658	609912	.	+	.	ID=id616;Dbxref=GeneID:1095990;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 106.60%2C E-value 4.9e-28;gbkey=misc_feature;gene=SC8B3.01
NC_003888.3	RefSeq	sequence_feature	610042	610290	.	+	.	ID=id617;Dbxref=GeneID:1095990;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 83.30%2C E-value 5e-21;gbkey=misc_feature;gene=SC8B3.01
NC_003888.3	RefSeq	repeat_region	610383	610393	.	-	.	ID=id618;gbkey=repeat_region
NC_003888.3	RefSeq	gene	610415	611488	.	-	.	ID=gene554;Dbxref=GeneID:1095991;Name=SC8B3.02c;gbkey=Gene;gene=SC8B3.02c;gene_biotype=protein_coding;gene_synonym=SC8B3.02c;locus_tag=SCO0568
NC_003888.3	RefSeq	CDS	610415	611488	.	-	0	ID=cds537;Parent=gene554;Dbxref=Genbank:NP_624881.1,GeneID:1095991;Name=NP_624881.1;Note=St8B3.02c%2C possible polyprenyl synthetase%2C len: 279 aa: similar to many e.g. TR:Q54193 (EMBL:L37405) geranylgeranyl pyrophosphate synthase from Streptomyces griseus (425 aa) fasta scores%3B opt: 479%2C Z-score: 544.9%2C 36.242%25 identity (38.710%25 ungapped) in 298 aa overlap and SW:P22939 (ISPA_ECOLI) geranyltransferase from Escherichia coli (299 aa) fasta scores%3B opt: 350%2C Z-score: 401.9%2C 31.939%25 identity (34.855%25 ungapped) in 263 aa overlap. Contains Prosite match to PS00723 Polyprenyl synthetases signature 1 and Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetase.;gbkey=CDS;gene=SC8B3.02c;product=polyprenyl synthetase;protein_id=NP_624881.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	610541	611362	.	-	.	ID=id619;Dbxref=GeneID:1095991;Note=Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetase%2C score 119.00%2C E-value 9.1e-32;gbkey=misc_feature;gene=SC8B3.02c
NC_003888.3	RefSeq	sequence_feature	611168	611212	.	-	.	ID=id620;Dbxref=GeneID:1095991;Note=PS00723 Polyprenyl synthetases signature 1;gbkey=misc_feature;gene=SC8B3.02c
NC_003888.3	RefSeq	gene	611984	612106	.	-	.	ID=gene555;Dbxref=GeneID:1095992;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;gene_synonym=SC5G5.01c,SC8B3.03c;locus_tag=SCO0569
NC_003888.3	RefSeq	CDS	611984	612106	.	-	0	ID=cds538;Parent=gene555;Dbxref=Genbank:NP_624882.1,GeneID:1095992;Name=NP_624882.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=NP_624882.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	612112	612117	.	-	.	ID=id621;gbkey=RBS
NC_003888.3	RefSeq	gene	612156	612320	.	-	.	ID=gene556;Dbxref=GeneID:1095993;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;gene_synonym=rpmG2,SC5G5.02c;locus_tag=SCO0570
NC_003888.3	RefSeq	CDS	612156	612320	.	-	0	ID=cds539;Parent=gene556;Dbxref=Genbank:NP_624883.1,GeneID:1095993;Name=NP_624883.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=NP_624883.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	612159	612302	.	-	.	ID=id622;Dbxref=GeneID:1095993;Note=Pfam match to entry PF00471 Ribosomal_L33%2C Ribosomal protein L33%2C score 35.30%2C E-value 9.5e-08;gbkey=misc_feature;gene=rpmG
NC_003888.3	RefSeq	ribosome_entry_site	612325	612330	.	-	.	ID=id623;gbkey=RBS
NC_003888.3	RefSeq	gene	612426	613754	.	-	.	ID=gene557;Dbxref=GeneID:1095994;Name=SC5G5.03c;gbkey=Gene;gene=SC5G5.03c;gene_biotype=protein_coding;gene_synonym=SC5G5.03c;locus_tag=SCO0571
NC_003888.3	RefSeq	CDS	612426	613754	.	-	0	ID=cds540;Parent=gene557;Dbxref=Genbank:NP_624884.1,GeneID:1095994;Name=NP_624884.1;Note=SC5G5.03c%2C possible peptidase%2C len: 442 aa%3B similar to TR:Q9CC46 (EMBL:AL583921) Mycobacterium leprae possible peptidase ML1288%2C 467 aa%3B fasta scores: opt: 1502 Z-score: 1703.4 bits: 324.4 E(): 2.7e-87%3B 52.874%25 identity in 435 aa overlap and to TR:CAC36379 (EMBL:AL590507) Streptomyces coelicolor peptidase SCI52.18c%2C 445 aa%3B fasta scores: opt: 1590 Z-score: 1803.4 bits: 342.9 E(): 7.5e-93%3B 56.706%25 identity in 425 aa overlap. Contains Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40 and match to Prosite entry PS00758 ArgE / dapE /%3D possible coiled-coil region at approx. residues 264..283;gbkey=CDS;gene=SC5G5.03c;product=hypothetical protein;protein_id=NP_624884.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	612594	613688	.	-	.	ID=id624;Dbxref=GeneID:1095994;Note=Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40%2C score 209.90%2C E-value 2.8e-59;gbkey=misc_feature;gene=SC5G5.03c
NC_003888.3	RefSeq	sequence_feature	613482	613511	.	-	.	ID=id625;Dbxref=GeneID:1095994;Note=PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1;gbkey=misc_feature;gene=SC5G5.03c
NC_003888.3	RefSeq	gene	613751	615151	.	-	.	ID=gene558;Dbxref=GeneID:1095995;Name=SC5G5.04c;gbkey=Gene;gene=SC5G5.04c;gene_biotype=protein_coding;gene_synonym=SC5G5.04c;locus_tag=SCO0572
NC_003888.3	RefSeq	CDS	613751	615151	.	-	0	ID=cds541;Parent=gene558;Dbxref=Genbank:NP_624885.1,GeneID:1095995;Name=NP_624885.1;Note=SC5G5.04c%2C probable cytosine permease%2C len: 466 aa%3B similar to SW:CODB_ECOLI (EMBL:X63656) Escherichia coli cytosine permease CodB or B0336%2C 419 aa%3B fasta scores: opt: 509 Z-score: 543.6 bits: 109.7 E(): 1.1e-22%3B 27.427%25 identity in 412 aa overlap. Contains Pfam match to entry PF02133 Transp_cyt_pur%2C Permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5G5.04c;product=cytosine permease;protein_id=NP_624885.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	613759	613763	.	-	.	ID=id626;Dbxref=GeneID:1095995;gbkey=RBS;gene=SC5G5.04c
NC_003888.3	RefSeq	sequence_feature	614699	615064	.	-	.	ID=id627;Dbxref=GeneID:1095995;Note=Pfam match to entry PF02133 Transp_cyt_pur%2C Permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin%2C score 25.30%2C E-value 1.6e-06;gbkey=misc_feature;gene=SC5G5.04c
NC_003888.3	RefSeq	gene	615154	616107	.	-	.	ID=gene559;Dbxref=GeneID:1095996;Name=SC5G5.05c;gbkey=Gene;gene=SC5G5.05c;gene_biotype=protein_coding;gene_synonym=SC5G5.05c;locus_tag=SCO0573
NC_003888.3	RefSeq	CDS	615154	616107	.	-	0	ID=cds542;Parent=gene559;Dbxref=Genbank:NP_624886.1,GeneID:1095996;Name=NP_624886.1;Note=SC5G5.05c%2C conserved hypothetical protein%2C len: 317 aa%3B similar to TR:O58746 (EMBL:AP000004) Pyrococcus horikoshii hypothetical 34.0 kDa protein PH1050%2C 315 aa%3B fasta scores: opt: 1322 Z-score: 1394.2 bits: 266.2 E(): 4.6e-70%3B 61.981%25 identity in 313 aa overlap;gbkey=CDS;gene=SC5G5.05c;product=hypothetical protein;protein_id=NP_624886.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	616116	616120	.	-	.	ID=id628;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	616243	616247	.	+	.	ID=id629;gbkey=RBS
NC_003888.3	RefSeq	gene	616253	617086	.	+	.	ID=gene560;Dbxref=GeneID:1095997;Name=SC5G5.06;gbkey=Gene;gene=SC5G5.06;gene_biotype=protein_coding;gene_synonym=SC5G5.06;locus_tag=SCO0574
NC_003888.3	RefSeq	CDS	616253	617086	.	+	0	ID=cds543;Parent=gene560;Dbxref=Genbank:NP_624887.1,GeneID:1095997;Name=NP_624887.1;Note=SC5G5.06%2C probable IclR-family regulatory protein%2C len: 277 aa%3B similar to SW:ICLR_ECOLI (EMBL:M31761) Escherichia coli acetate operon repressor IclR or B4018%2C 274 aa%3B fasta scores: opt: 281 Z-score: 332.8 bits: 69.4 E(): 6.1e-11%3B 25.926%25 identity in 243 aa overlap and to SW:GYLR_STRCO (EMBL:X14188) Streptomyces coelicolor glycerol operon regulatory protein GylR or SCI46.03%2C 254 aa%3B fasta scores: opt: 290 Z-score: 343.7 bits: 71.3 E(): 1.5e-11%3B 30.588%25 identity in 255 aa overlap. Contains Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator;gbkey=CDS;gene=SC5G5.06;product=IclR family regulatory protein;protein_id=NP_624887.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	616478	617032	.	+	.	ID=id630;Dbxref=GeneID:1095997;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 93.90%2C E-value 3.3e-24;gbkey=misc_feature;gene=SC5G5.06
NC_003888.3	RefSeq	gene	617124	617855	.	+	.	ID=gene561;Dbxref=GeneID:1095998;Name=SC5G5.07;gbkey=Gene;gene=SC5G5.07;gene_biotype=protein_coding;gene_synonym=SC5G5.07;locus_tag=SCO0575
NC_003888.3	RefSeq	CDS	617124	617855	.	+	0	ID=cds544;Parent=gene561;Dbxref=Genbank:NP_624888.1,GeneID:1095998;Name=NP_624888.1;Note=alpha-aspartyl dipeptidase%3B catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue%3B belongs to peptidase S51 family;gbkey=CDS;gene=SC5G5.07;product=peptidase E;protein_id=NP_624888.1;transl_table=11
NC_003888.3	RefSeq	gene	617913	618788	.	-	.	ID=gene562;Dbxref=GeneID:1095999;Name=SC5G5.08c;gbkey=Gene;gene=SC5G5.08c;gene_biotype=protein_coding;gene_synonym=SC5G5.08c;locus_tag=SCO0576
NC_003888.3	RefSeq	CDS	617913	618788	.	-	0	ID=cds545;Parent=gene562;Dbxref=Genbank:NP_624889.1,GeneID:1095999;Name=NP_624889.1;Note=SC5G5.08c%2C possible oxidoreductase%2C len: 291 aa%3B low similarity to many ketol-acid reductoisomerases%2C e.g. SW:ILVC_METTH (EMBL:AE000905) Methanobacterium thermoautotrophicum ketol-acid reductoisomerase (EC 1.1.1.86) IlvC or MTH1442%2C 333 aa%3B fasta scores: opt: 159 Z-score: 188.7 bits: 43.1 E(): 0.0065%3B 25.301%25 identity in 166 aa overlap;gbkey=CDS;gene=SC5G5.08c;product=oxidoreductase;protein_id=NP_624889.1;transl_table=11
NC_003888.3	RefSeq	gene	618788	619588	.	-	.	ID=gene563;Dbxref=GeneID:1096000;Name=SC5G5.09c;gbkey=Gene;gene=SC5G5.09c;gene_biotype=protein_coding;gene_synonym=SC5G5.09c,SCF55.01c;locus_tag=SCO0577
NC_003888.3	RefSeq	CDS	618788	619588	.	-	0	ID=cds546;Parent=gene563;Dbxref=Genbank:NP_733507.1,GeneID:1096000;Name=NP_733507.1;Note=SCF55.01c%2C hypothetical protein%2C len: >231 aa%3B similar to SW:YIHM_ECOLI (EMBL:L19201) Escherichia coli hypothetical 36.9 KD protein in GlnA-Rbn intergenic region%2C 326 aa%3B fasta scores: opt: 188 z-score: 232.7 E(): 1.4e-05%3B 22.1%25 identity in 217 aa overlap~SC5G5.09c%2C conserved hypothetical protein (fragment)%2C len: >92 aa%3B similar to C-terminal region of TR:BAB38218 (EMBL:AP002567) Escherichia coli O157:H7 hypothetical 37.1 kDa protein ECS4795%2C 326 aa%3B fasta scores: opt: 106 Z-score: 142.9 bits: 33.0 E(): 2.4%3B 25.882%25 identity in 85 aa overlap;gbkey=CDS;gene=SC5G5.09c;product=hypothetical protein;protein_id=NP_733507.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	618795	618799	.	-	.	ID=id631;Dbxref=GeneID:1096000;gbkey=RBS;gene=SC5G5.09c
NC_003888.3	RefSeq	gene	619588	620367	.	-	.	ID=gene564;Dbxref=GeneID:1096001;Name=SCF55.02c;gbkey=Gene;gene=SCF55.02c;gene_biotype=protein_coding;gene_synonym=SCF55.02c;locus_tag=SCO0578
NC_003888.3	RefSeq	CDS	619588	620367	.	-	0	ID=cds547;Parent=gene564;Dbxref=Genbank:NP_624890.1,GeneID:1096001;Name=NP_624890.1;Note=SCF55.02c%2C possible triosephosphate isomerase%2C len: 259 aa%3B similar to SW:TPIS_MYCTU (EMBL:Z95844) Mycobacterium tuberculosis triosephosphate isomerase (EC 5.3.1.1) TpiA%2C 261 aa%3B fasta scores: opt: 437 z-score: 490.8 E(): 5.8e-20%3B 38.9%25 identity in 221 aa overlap. Contains match to Pfam entry PF00121 TIM%2C Triosephosphate isomerase;gbkey=CDS;gene=SCF55.02c;product=triosephosphate isomerase;protein_id=NP_624890.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	619951	620157	.	-	.	ID=id632;Dbxref=GeneID:1096001;Note=Pfam match to entry PF00121 TIM%2C Triosephosphate isomerase%2C score 82.10%2C E-value 8e-26;gbkey=misc_feature;gene=SCF55.02c
NC_003888.3	RefSeq	gene	620367	620879	.	-	.	ID=gene565;Dbxref=GeneID:1096002;Name=SCF55.03c;gbkey=Gene;gene=SCF55.03c;gene_biotype=protein_coding;gene_synonym=SCF55.03c;locus_tag=SCO0579
NC_003888.3	RefSeq	CDS	620367	620879	.	-	0	ID=cds548;Parent=gene565;Dbxref=Genbank:NP_624891.1,GeneID:1096002;Name=NP_624891.1;Note=SCF55.03c%2C possible sugar-phosphate isomerase%2C len: 170 aa%3B similar to SW:RPIB_ECOLI (EMBL:X82203) Escherichia coli ribose 5-phosphate isomerase B (EC 5.3.1.6) (phosphoriboisomerase B) RpiB%2C 149 aa %3Bfasta scores: opt: 299 z-score: 364.4 E(): 6.3e-13%3B 38.5%25 identity in 148 aa overlap;gbkey=CDS;gene=SCF55.03c;product=ribose 5-phosphate isomerase;protein_id=NP_624891.1;transl_table=11
NC_003888.3	RefSeq	gene	620891	622672	.	-	.	ID=gene566;Dbxref=GeneID:1096003;Name=SCF55.04c;gbkey=Gene;gene=SCF55.04c;gene_biotype=protein_coding;gene_synonym=SCF55.04c;locus_tag=SCO0580
NC_003888.3	RefSeq	CDS	620891	622672	.	-	0	ID=cds549;Parent=gene566;Dbxref=Genbank:NP_624892.1,GeneID:1096003;Name=NP_624892.1;Note=in some organisms the DhaK and DhaL subunits are encoded by separate genes%3B in others they are fused%3B functions along with DhaM to phosphorylate dihydroxyacetone;gbkey=CDS;gene=SCF55.04c;product=dihydroxyacetone kinase;protein_id=NP_624892.1;transl_table=11
NC_003888.3	RefSeq	gene	622669	624036	.	-	.	ID=gene567;Dbxref=GeneID:1096004;Name=SCF55.05c;gbkey=Gene;gene=SCF55.05c;gene_biotype=protein_coding;gene_synonym=SCF55.05c;locus_tag=SCO0581
NC_003888.3	RefSeq	CDS	622669	624036	.	-	0	ID=cds550;Parent=gene567;Dbxref=Genbank:NP_624893.1,GeneID:1096004;Name=NP_624893.1;Note=SCF55.05c%2C probable transporter%2C len: 455 aa%3B similar to SW:TUB4_AGRVI (EMBL:U25634) Agrobacterium vitis tartrate transporter Tub4%2C 433 aa%3B fasta scores: opt: 894 z-score: 1016.3 E(): 0%3B 42.8%25 identity in 432 aa overlap and to SW:PHT1_PSEPU (EMBL:D13229) Pseudomonas putida phthalate transporter Pht1%2C 451 aa%3B fasta scores: opt: 745 z-score: 847.5 E(): 0%3B 30.8%25 identity in 435 aa overlap. Contains match to Pfam entry PF00083 sugar_tr%2C Sugar (and other) transporter;gbkey=CDS;gene=SCF55.05c;product=transporter;protein_id=NP_624893.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	622678	623973	.	-	.	ID=id633;Dbxref=GeneID:1096004;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -88.50%2C E-value 0.001;gbkey=misc_feature;gene=SCF55.05c
NC_003888.3	RefSeq	ribosome_entry_site	622680	622684	.	-	.	ID=id634;Dbxref=GeneID:1096004;gbkey=RBS;gene=SCF55.05c
NC_003888.3	RefSeq	ribosome_entry_site	624043	624046	.	-	.	ID=id635;gbkey=RBS
NC_003888.3	RefSeq	gene	624273	625034	.	+	.	ID=gene568;Dbxref=GeneID:1096005;Name=SCF55.06;gbkey=Gene;gene=SCF55.06;gene_biotype=protein_coding;gene_synonym=SCF55.06;locus_tag=SCO0582
NC_003888.3	RefSeq	CDS	624273	625034	.	+	0	ID=cds551;Parent=gene568;Dbxref=Genbank:NP_624894.1,GeneID:1096005;Name=NP_624894.1;Note=SCF55.06%2C possible transcriptional regulator%2C len: 253 aa%3B similar to SW:PDHR_ECOLI (EMBL:V01498) Escherichia coli%2C pyruvate dehydrogenase complex repressor PdhR%2C opt: 292 z-score: 349.5 E(): 4.3e-12%3B 28.6%25 identity in 220 aa overlap. Contains match to Pfam entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCF55.06;product=transcriptional regulator;protein_id=NP_624894.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	624372	624551	.	+	.	ID=id636;Dbxref=GeneID:1096005;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 80.20%2C E-value 3.1e-23;gbkey=misc_feature;gene=SCF55.06
NC_003888.3	RefSeq	ribosome_entry_site	625117	625120	.	+	.	ID=id637;gbkey=RBS
NC_003888.3	RefSeq	gene	625127	626350	.	+	.	ID=gene569;Dbxref=GeneID:1096006;Name=SCF55.07;gbkey=Gene;gene=SCF55.07;gene_biotype=protein_coding;gene_synonym=SCF55.07;locus_tag=SCO0583
NC_003888.3	RefSeq	CDS	625127	626350	.	+	0	ID=cds552;Parent=gene569;Dbxref=Genbank:NP_624895.1,GeneID:1096006;Name=NP_624895.1;Note=SCF55.07%2C probable cytochrome P450%2C len: 407 aa%3B similar to SW:Y766_MYCTU (EMBL:Z80226) Mycobacterium tuberculosis cytochrome P450 RV0766c (EC 1.14.-.-) 402 aa %3B fasta scores: opt: 601 z-score: 706.2 E(): 5.8e-32%3B 33.3%25 identity in 403 aa overlap%2C to SWC:PXI_BACME (EMBL:X16610) Bacillus megaterium cytochrome P450(BM-1) (EC 1.14.14.1) Cyp106%2C 410 aa%3B fasta scores: opt: 565 z-score: 664.0 E(): 1.3e-29%3B 30.6%25 identity in 405 aa overlap and to Streptomyces coelicolor SCF55.08c%2C 420 aa%3B fasta scores: opt: 204 z-score: 221.7 E(): 5.2e-07%3B 28.1%25 identity in 417 aa overlap. Contains match to Pfam entry PF00067 p450%2C Cytochrome P450;gbkey=CDS;gene=SCF55.07;product=cytochrome P450;protein_id=NP_624895.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	625238	626347	.	+	.	ID=id638;Dbxref=GeneID:1096006;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 165.40%2C E-value 1.8e-50;gbkey=misc_feature;gene=SCF55.07
NC_003888.3	RefSeq	gene	626369	627631	.	-	.	ID=gene570;Dbxref=GeneID:1096007;Name=SCF55.08c;gbkey=Gene;gene=SCF55.08c;gene_biotype=protein_coding;gene_synonym=SCF55.08c;locus_tag=SCO0584
NC_003888.3	RefSeq	CDS	626369	627631	.	-	0	ID=cds553;Parent=gene570;Dbxref=Genbank:NP_624896.1,GeneID:1096007;Name=NP_624896.1;Note=SCF55.08c%2C possible cytochrome P450%2C len: 420 aa%3B similar to TR:O87605 (EMBL:AF087022) Streptomyces violaceus (Streptomyces venezuelae) cytochrome P450 monooxygenase PicK%2C 416 aa%3B fasta scores: opt: 494 z-score: 582.0 E(): 4.8e-25%3B 31.3%25 identity in 416 aa overlap%2C to SW:CPXF_STRGO (EMBL:M32239) Sterptomyces griseolus cytochrome P450-SU2 (EC 1.14.-.-) (P450-CVB1) (CYP105B1)%2C SubC%2C 402 aa%3B fasta scores: opt: 405 z-score: 477.7 E(): 3.1e-19%3B 29.6%25 identity in 412 aa overlap and to Streptomyces coelicolor SCF55.07%2C 407 aa%3B fasta scores: opt: 204 z-score: 217.0 E(): 9.5e-07%3B 27.4%25 identity in 416 aa overlap;gbkey=CDS;gene=SCF55.08c;product=cytochrome P450;protein_id=NP_624896.1;transl_table=11
NC_003888.3	RefSeq	gene	627628	628164	.	-	.	ID=gene571;Dbxref=GeneID:1096008;Name=cvnD11;gbkey=Gene;gene=cvnD11;gene_biotype=protein_coding;gene_synonym=cvnD11,SCF55.09c;locus_tag=SCO0585
NC_003888.3	RefSeq	CDS	627628	628164	.	-	0	ID=cds554;Parent=gene571;Dbxref=Genbank:NP_624897.1,GeneID:1096008;Name=NP_624897.1;Note=SCF55.09c%2C cvnD11%2C probable ATP/GTP binding protein%2C len: 178 aa%3B similar to TR:CAB41559 (EMBL:AL049727) Streptomyces coelicolor ATP/GTP binding protein%2C SC9B1.13c%2C 181 aa%3B fasta scores: opt: 617 z-score: 780.0 E(): 0%3B 57.5%25 identity in 179 aa overlap and low similarity to SW:YPT1_VOLCA (EMBL:M93438) Volvox carteri GTP binding protein YPTV1%2C 203 aa%3B fasta scores: opt: 117 z-score: 156.9 E(): 0.23%3B 23.2%25 identity in 138 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=cvnD11;product=ATP/GTP binding protein;protein_id=NP_624897.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	627630	630912	.	-	.	ID=id639;Note=DNA fragment similar to Streptomyces coelicolor cosmid SC9B1.13c to SC9B1.16c and cosmid StI41.10c to StI41.13c;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	627640	627643	.	-	.	ID=id640;Dbxref=GeneID:1096008;gbkey=RBS;gene=cvnD11
NC_003888.3	RefSeq	sequence_feature	628138	628161	.	-	.	ID=id641;Dbxref=GeneID:1096008;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD11
NC_003888.3	RefSeq	gene	628247	628588	.	-	.	ID=gene572;Dbxref=GeneID:1096009;Name=cvnC11;gbkey=Gene;gene=cvnC11;gene_biotype=protein_coding;gene_synonym=cvnC11,SCF55.10c;locus_tag=SCO0586
NC_003888.3	RefSeq	CDS	628247	628588	.	-	0	ID=cds555;Parent=gene572;Dbxref=Genbank:NP_624898.1,GeneID:1096009;Name=NP_624898.1;Note=SCF55.10c%2C cvnC11%2C hypothetical protein%2C len: 113 aa%3B similar to various hypothetical proteins%2C e.g: TR:CAB41560 (EMBL:AL049727) Streptomyces coelicolor hypothetical 12.8 KD protein SC9B1.14c%2C 119 aa%3B fasta scores:opt: 264 z-score: 363.7 E(): 7e-13%3B 51.8%25 identity in 112 aa overlap;gbkey=CDS;gene=cvnC11;product=hypothetical protein;protein_id=NP_624898.1;transl_table=11
NC_003888.3	RefSeq	gene	628600	629058	.	-	.	ID=gene573;Dbxref=GeneID:1096010;Name=cvnB11;gbkey=Gene;gene=cvnB11;gene_biotype=protein_coding;gene_synonym=cvnB11,SCF55.11c;locus_tag=SCO0587
NC_003888.3	RefSeq	CDS	628600	629058	.	-	0	ID=cds556;Parent=gene573;Dbxref=Genbank:NP_624899.1,GeneID:1096010;Name=NP_624899.1;Note=SCF55.11c%2C cvnB11%2C hypothetical protein%2C len: 152 aa%3B similar to various hypothetical proteins%2C e.g. TR:O86521 (EMBL:AL031124) Streptomyces coelicolor hypothetical 14.7 KD protein SC1C2.20c%2C 140 aa%3B fasta scores: opt: 337 z-score: 422.9 E(): 3.5e-16%3B 41.3%25 identity in 138 aa overlap%2C to TR:CAB41561 (EMBL:AL049727) Streptomyces coelicolor hypothetical 14.4 KD protein SC9B1.15c%2C 139 aa%3B fasta scores: opt: 314 z-score: 395.1 E(): 1.2e-14%3B 41.5%25 identity in 142 aa overlap and to TR:Q9L138 (EMBL:AL158061c) Streptomyces coelicolor hypothetical protein SC6D11.17c%2C 135 aa%3B fasta scores: opt: 634 Z-score: 769.5 E(): 3.1e-35%3B 71.875%25 identity in 128 aa overlap;gbkey=CDS;gene=cvnB11;product=hypothetical protein;protein_id=NP_624899.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	629068	629072	.	-	.	ID=id642;gbkey=RBS
NC_003888.3	RefSeq	gene	629185	630912	.	-	.	ID=gene574;Dbxref=GeneID:1096011;Name=cvnA11;gbkey=Gene;gene=cvnA11;gene_biotype=protein_coding;gene_synonym=cvnA11,SCF55.12c;locus_tag=SCO0588
NC_003888.3	RefSeq	CDS	629185	630912	.	-	0	ID=cds557;Parent=gene574;Dbxref=Genbank:NP_624900.1,GeneID:1096011;Name=NP_624900.1;Note=SCF55.12c%2C cvnA11%2C possible sensor kinase%2C len: 575 aa%3B low similarity to C-terminus Streptomyces coelicolor possible sensor kinase SC6G9.44c%2C 806 aa%3B fasta scores: opt: 380 z-score: 360.0 E(): 1.1e-12%3B 25.4%25 identity in 543 aa overlap and to N-terminus TR:CAB41562 (EMBL:AL049727) Streptomyces coelicolor large hypothetical protein SC9B1.16c%2C 877 aa%3B fasta scores: opt: 515 z-score: 485.5 E(): 1.1e-19%3B 31.9%25 identity in 433 aa overlap. Contains match to Pfam entry PF00512 signal%2C Histidine kinase and Prosite entry PS00152 ATP synthase alpha and beta subunits signature. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=cvnA11;product=sensor kinase;protein_id=NP_624900.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	629590	630198	.	-	.	ID=id643;Dbxref=GeneID:1096011;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score -37.60%2C E-value 0.0054;gbkey=misc_feature;gene=cvnA11
NC_003888.3	RefSeq	ribosome_entry_site	630922	630925	.	-	.	ID=id644;gbkey=RBS
NC_003888.3	RefSeq	gene	631216	632103	.	-	.	ID=gene575;Dbxref=GeneID:1096012;Name=SCF55.13c;gbkey=Gene;gene=SCF55.13c;gene_biotype=protein_coding;gene_synonym=SCF55.13c;locus_tag=SCO0589
NC_003888.3	RefSeq	CDS	631216	632103	.	-	0	ID=cds558;Parent=gene575;Dbxref=Genbank:NP_624901.1,GeneID:1096012;Name=NP_624901.1;Note=SCF55.13c%2C probable lysR-family transcriptional regulator%2C len: 295 aa%3B similar to SW:GLTR_BACSU (EMBL:U79494) Bacillus subtilis transcriptional regulatory protein GltR%2C 296 aa%3B fasta scores: opt: 421 z-score: 502.5 E(): 1.3e-20%3B 33.6%25 identity in 244 aa overlap. Contains match to Pfam entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Contains possible helix-turn-helix motif at residues 16..37 (+4.59 SD);gbkey=CDS;gene=SCF55.13c;product=LysR family transcriptional regulator;protein_id=NP_624901.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	631672	632073	.	-	.	ID=id645;Dbxref=GeneID:1096012;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 125.80%2C E-value 8.2e-34;gbkey=misc_feature;gene=SCF55.13c
NC_003888.3	RefSeq	sequence_feature	631963	632055	.	-	.	ID=id646;Dbxref=GeneID:1096012;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCF55.13c
NC_003888.3	RefSeq	sequence_feature	631993	632058	.	-	.	ID=id647;Dbxref=GeneID:1096012;Note=Helix-turn-helix from SCF55.13c score 1585;gbkey=misc_feature;gene=SCF55.13c
NC_003888.3	RefSeq	gene	632180	633049	.	+	.	ID=gene576;Dbxref=GeneID:1096013;Name=SCF55.14;gbkey=Gene;gene=SCF55.14;gene_biotype=protein_coding;gene_synonym=SCF55.14;locus_tag=SCO0590
NC_003888.3	RefSeq	CDS	632180	633049	.	+	0	ID=cds559;Parent=gene576;Dbxref=Genbank:NP_624902.1,GeneID:1096013;Name=NP_624902.1;Note=SCF55.14%2C possible oxidoreductase%2C len: 289 aa%3B similar to various hypothetical proteins%2C e.g. TR:O31570 (EMBL:Z99108) Bacillus subtilis YfhB protein%2C 293 aa%3B fasta scores: opt: 400 z-score: 454.6 E(): 6e-18%3B 32.1%25 identity in 287 aa overlap and low similarity to SW:PHZF_PSEFL (EMBL:L48616) Pseudomonas fluorescens phenazine biosynthesis protein PhzF oxidoreductase%2C 278 aa%3B fasta scores: opt: 225 z-score: 259.7 E(): 4.3e-07%3B 29.3%25 identity in 287 aa overlap;gbkey=CDS;gene=SCF55.14;product=oxidoreductase;protein_id=NP_624902.1;transl_table=11
NC_003888.3	RefSeq	gene	633119	633958	.	+	.	ID=gene577;Dbxref=GeneID:1096014;Name=SCF55.15;gbkey=Gene;gene=SCF55.15;gene_biotype=protein_coding;gene_synonym=SCF55.15;locus_tag=SCO0591
NC_003888.3	RefSeq	CDS	633119	633958	.	+	0	ID=cds560;Parent=gene577;Dbxref=Genbank:NP_624903.1,GeneID:1096014;Name=NP_624903.1;Note=SCF55.15%2C probable lysozyme precursor%2C len: 279 aa%3B similar to SW:LYCM_STRGL (EMBL:M30645) Streptomyces globisporus lysozyme M1 precursor (EC 3.2.1.17) (1%2C4-beta-N-acetylmuramidase M1) Acm%2C 294 aa%3B fasta scores: opt: 837 z-score: 971.2 E(): 0%3B 44.4%25 identity in 284 aa overlap. Contains match to Pfam entry PF01183 Glyco_hydro_25%2C Glycosyl hydrolases family 25 and two matches to Prosite entries PS00953 Glycosyl hydrolases family 25 active sites signature and PS00017 ATP/GTP-binding site motif A (P-loop). Contains also possible N-terminal signal sequence;gbkey=CDS;gene=SCF55.15;product=lysozyme;protein_id=NP_624903.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	633335	633670	.	+	.	ID=id648;Dbxref=GeneID:1096014;Note=Pfam match to entry PF01183 Glyco_hydro_25%2C Glycosyl hydrolases family 25%2C score 108.80%2C E-value 1.1e-28;gbkey=misc_feature;gene=SCF55.15
NC_003888.3	RefSeq	sequence_feature	633350	633451	.	+	.	ID=id649;Dbxref=GeneID:1096014;Note=PS00953 Glycosyl hydrolases family 25 active sites signature;gbkey=misc_feature;gene=SCF55.15
NC_003888.3	RefSeq	sequence_feature	633578	633601	.	+	.	ID=id650;Dbxref=GeneID:1096014;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF55.15
NC_003888.3	RefSeq	gene	633986	634708	.	-	.	ID=gene578;Dbxref=GeneID:1096015;Name=SCF55.16c;gbkey=Gene;gene=SCF55.16c;gene_biotype=protein_coding;gene_synonym=SCF55.16c;locus_tag=SCO0592
NC_003888.3	RefSeq	CDS	633986	634708	.	-	0	ID=cds561;Parent=gene578;Dbxref=Genbank:NP_624904.1,GeneID:1096015;Name=NP_624904.1;Note=SCF55.16c%2C unknown%2C len: 240 aa;gbkey=CDS;gene=SCF55.16c;product=hypothetical protein;protein_id=NP_624904.1;transl_table=11
NC_003888.3	RefSeq	gene	634879	635706	.	-	.	ID=gene579;Dbxref=GeneID:1096016;Name=SCF55.17c;gbkey=Gene;gene=SCF55.17c;gene_biotype=protein_coding;gene_synonym=SCF55.17c;locus_tag=SCO0593
NC_003888.3	RefSeq	CDS	634879	635706	.	-	0	ID=cds562;Parent=gene579;Dbxref=Genbank:NP_624905.1,GeneID:1096016;Name=NP_624905.1;Note=SCF55.17c%2C unknown%2C len: 275 aa;gbkey=CDS;gene=SCF55.17c;product=hypothetical protein;protein_id=NP_624905.1;transl_table=11
NC_003888.3	RefSeq	gene	635776	636516	.	-	.	ID=gene580;Dbxref=GeneID:1096017;Name=SCF55.18c;gbkey=Gene;gene=SCF55.18c;gene_biotype=protein_coding;gene_synonym=SCF55.18c;locus_tag=SCO0594
NC_003888.3	RefSeq	CDS	635776	636516	.	-	0	ID=cds563;Parent=gene580;Dbxref=Genbank:NP_624906.1,GeneID:1096017;Name=NP_624906.1;Note=SCF55.18c%2C possible methyltransferase%2C len: 246 aa%3B similar to TR:CAB48912 (EMBL:AL096837) Streptomyces ceolicolor  methyltransferase SCF43A.25c%2C 215 aa%3B fasta scores: opt: 190 z-score: 231.6 E(): 1.6e-05%3B 34.9%25 identity in 126 aa overlap and to SW:BIOC_SERMA biotin synthesis protein%2C BioC%2C 255 aa%3B fasta scores: opt: 179 z-score: 217.7 E(): 9.4e-05%3B 32.3%25 identity in 130 aa overlap;gbkey=CDS;gene=SCF55.18c;product=methyltransferase;protein_id=NP_624906.1;transl_table=11
NC_003888.3	RefSeq	gene	636573	637166	.	+	.	ID=gene581;Dbxref=GeneID:1096018;Name=SCF55.19;gbkey=Gene;gene=SCF55.19;gene_biotype=protein_coding;gene_synonym=SCF55.19;locus_tag=SCO0595
NC_003888.3	RefSeq	CDS	636573	637166	.	+	0	ID=cds564;Parent=gene581;Dbxref=Genbank:NP_624907.1,GeneID:1096018;Name=NP_624907.1;Note=SCF55.19%2C hypothetical protein%2C len: 197 aa%3B similar to TR:O05917 (EMBL:Z95210) Mycobacterium tuberculosis hypothetical 26.9 KD protein MTCY21C12.19c%2C 245 aa%3B fasta scores: opt: 459 z-score: 543.0 E(): 7.2e-23%3B 39.3%25 identity in 201 aa overlap;gbkey=CDS;gene=SCF55.19;product=hypothetical protein;protein_id=NP_624907.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	637251	637254	.	+	.	ID=id651;gbkey=RBS
NC_003888.3	RefSeq	gene	637261	637824	.	+	.	ID=gene582;Dbxref=GeneID:1096019;Name=SCF55.20;gbkey=Gene;gene=SCF55.20;gene_biotype=protein_coding;gene_synonym=SCF55.20;locus_tag=SCO0596
NC_003888.3	RefSeq	CDS	637261	637824	.	+	0	ID=cds565;Parent=gene582;Dbxref=Genbank:NP_624908.1,GeneID:1096019;Name=NP_624908.1;Note=SCF55.20%2C probable DNA-binding protein%2C len: 187 aa%3B similar to SW:FTPA_HAEDU (EMBL:U18769) Haemophilus ducreyi fine tangled pili major subunit (24 KD surface protein) FtpA%2C 189 aa%3B fasta scores: opt: 559 z-score: 670.3 E(): 5.8e-30%3B 49.1%25 identity in 171 aa overlap and to SW:DPS_ECOLI (EMBL:X69337) Escherichia coli DNA protection during starvation protein Dps or PexB%2C 166 aa%3B fasta scores: opt: 276 z-score: 338.0 E(): 1.9e-11%3B 34.2%25 identity in 161 aa overlap. Contains match to Prosite entry PS00818 Dps protein family signature 1;gbkey=CDS;gene=SCF55.20;product=DNA-binding protein;protein_id=NP_624908.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	637390	637440	.	+	.	ID=id652;Dbxref=GeneID:1096019;Note=PS00818 Dps protein family signature 1;gbkey=misc_feature;gene=SCF55.20
NC_003888.3	RefSeq	gene	637911	638306	.	-	.	ID=gene583;Dbxref=GeneID:1096020;Name=SCF55.21c;gbkey=Gene;gene=SCF55.21c;gene_biotype=protein_coding;gene_synonym=SCF55.21c;locus_tag=SCO0597
NC_003888.3	RefSeq	CDS	637911	638306	.	-	0	ID=cds566;Parent=gene583;Dbxref=Genbank:NP_624909.1,GeneID:1096020;Name=NP_624909.1;Note=SCF55.21c%2C unknown%2C len: 131 aa%3B sequenced as TR:AAK61188 (EMBL:AF06826) Streptomyces coelicolor A3(2) ORFA%2C 131 aa;gbkey=CDS;gene=SCF55.21c;product=hypothetical protein;protein_id=NP_624909.1;transl_table=11
NC_003888.3	RefSeq	gene	638511	638804	.	+	.	ID=gene584;Dbxref=GeneID:1096021;Name=SCF55.22;gbkey=Gene;gene=SCF55.22;gene_biotype=protein_coding;gene_synonym=SCF55.22;locus_tag=SCO0598
NC_003888.3	RefSeq	CDS	638511	638804	.	+	0	ID=cds567;Parent=gene584;Dbxref=Genbank:NP_624910.1,GeneID:1096021;Name=NP_624910.1;Note=SCF55.22%2C probable anti anti sigma factor%2C len: 97 aa%3B identical to previously sequenced TR:CAB55831 (EMBL:AJ249580) Streptomyces coelicolor anti anti sigma factor%2C 97 aa;gbkey=CDS;gene=SCF55.22;product=anti anti sigma factor;protein_id=NP_624910.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	638787	638790	.	+	.	ID=id653;Dbxref=GeneID:1096021;gbkey=RBS;gene=SCF55.22
NC_003888.3	RefSeq	gene	638801	639730	.	+	.	ID=gene585;Dbxref=GeneID:1096022;Name=SCF55.23;gbkey=Gene;gene=SCF55.23;gene_biotype=protein_coding;gene_synonym=SCF55.23;locus_tag=SCO0599
NC_003888.3	RefSeq	CDS	638801	639730	.	+	0	ID=cds568;Parent=gene585;Dbxref=Genbank:NP_624911.1,GeneID:1096022;Name=NP_624911.1;Note=SCF55.23%2C probable regulator of sig8%2C 309 aa%3B identical to previously sequenced TR:CAB55832 (EMBL:AJ249580) Streptomyces coelicolor regulator of sig8%2C 309 aa and to TR:Q9ZBT2 (EMBL:AL034446) Streptomyces coelicolor regulatory protein SC1A9.20%2C 153 aa%3B fasta scores: opt: 167 z-score: 197.6 E(): 0.0012%3B 40.4%25 identity in 114 aa overlap;gbkey=CDS;gene=SCF55.23;product=regulator of sig8;protein_id=NP_624911.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	639847	639851	.	+	.	ID=id654;gbkey=RBS
NC_003888.3	RefSeq	gene	639859	640704	.	+	.	ID=gene586;Dbxref=GeneID:1096023;Name=SCF55.24;gbkey=Gene;gene=SCF55.24;gene_biotype=protein_coding;gene_synonym=SCF55.24,sig8;locus_tag=SCO0600
NC_003888.3	RefSeq	CDS	639859	640704	.	+	0	ID=cds569;Parent=gene586;Dbxref=Genbank:NP_624912.1,GeneID:1096023;Name=NP_624912.1;Note=SCF55.24%2C sig8%2C len: 266 aa%3B identical to previously sequenced TR:CAB55833 (EMBL:AJ249580) Streptomyces coelicolor Sig8 protein%2C 266 aa and similar to SW:RPOF_STRCO (EMBL:L11648) Streptomyces coelicolor RNA polymerase sigma-F factor%2C SigF%2C 287 aa%3B fasta scores: opt: 759 z-score: 872.2 E(): 0%3B 47.6%25 identity in 269 aa overlap and to Streptomyces coelicolor RNA polymerase sigma factor SC5H1.14%2C 295 aa%3B fasta scores: opt: 1265 z-score: 1335.0 E(): 0%3B 73.8%25 identity in 263 aa overlap. Contains match to Pfam entry PF00140 sigma70%2C Sigma-70 factor and to Prosite entry PS00715 Sigma-70 factors family signature 1. Contains also possible helix-turn-helix motif at residues 21702..21767%2C score 2276 (+6.94 SD);gbkey=CDS;gene=SCF55.24;product=RNA polymerase sigma factor sig8;protein_id=NP_624912.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	640012	640683	.	+	.	ID=id655;Dbxref=GeneID:1096023;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 250.20%2C E-value 2.8e-71;gbkey=misc_feature;gene=SCF55.24
NC_003888.3	RefSeq	sequence_feature	640105	640146	.	+	.	ID=id656;Dbxref=GeneID:1096023;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=SCF55.24
NC_003888.3	RefSeq	sequence_feature	640594	640659	.	+	.	ID=id657;Dbxref=GeneID:1096023;Note=Helix-turn-helix from SCF55.24 score 2276;gbkey=misc_feature;gene=SCF55.24
NC_003888.3	RefSeq	gene	640719	641762	.	-	.	ID=gene587;Dbxref=GeneID:1096024;Name=SCF55.25c;gbkey=Gene;gene=SCF55.25c;gene_biotype=protein_coding;gene_synonym=SCF55.25c;locus_tag=SCO0601
NC_003888.3	RefSeq	CDS	640719	641762	.	-	0	ID=cds570;Parent=gene587;Dbxref=Genbank:NP_624913.1,GeneID:1096024;Name=NP_624913.1;Note=SCF55.25c%2C hypothetical protein%2C len: 347 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB45615 (EMBL:AL079356) Streptomyces coelicolor hypothetical 38.9 KD protein SC6G9.24c%2C 365 aa%3B fasta scores: opt: 621 z-score: 691.9 E(): 3.7e-31%3B 35.8%25 identity in 349 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCF55.25c;product=hypothetical protein;protein_id=NP_624913.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	641765	641769	.	-	.	ID=id658;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	642000	642003	.	+	.	ID=id659;gbkey=RBS
NC_003888.3	RefSeq	gene	642012	643133	.	+	.	ID=gene588;Dbxref=GeneID:1096025;Name=SCF55.26;gbkey=Gene;gene=SCF55.26;gene_biotype=protein_coding;gene_synonym=SCF55.26;locus_tag=SCO0602
NC_003888.3	RefSeq	CDS	642012	643133	.	+	0	ID=cds571;Parent=gene588;Dbxref=Genbank:NP_624914.1,GeneID:1096025;Name=NP_624914.1;Note=SCF55.26%2C hypothetical protein%2C len: aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB42732 (EMBL:AL049826) Streptomyces coelicolor hypothetical 42.9 KD protein SCH24.26c%2C 373 aa%3B fasta scores: opt: 1649 z-score: 1932.2 E(): 0%3B 61.8%25 identity in 374 aa overlap and low similarity to TR:O51533 (EMBL:AE001160) Borrelia burgdoferi FemA protein (FemA) BB0586%2C 347 aa%3B fasta scores: opt: 307 z-score: 363.4 E(): 7.2e-13%3B 27.4%25 identity in 197 aa overlap;gbkey=CDS;gene=SCF55.26;product=hypothetical protein;protein_id=NP_624914.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	643163	643166	.	+	.	ID=id660;gbkey=RBS
NC_003888.3	RefSeq	gene	643179	643880	.	+	.	ID=gene589;Dbxref=GeneID:1096026;Name=SCF55.27;gbkey=Gene;gene=SCF55.27;gene_biotype=protein_coding;gene_synonym=SCF55.27;locus_tag=SCO0603
NC_003888.3	RefSeq	CDS	643179	643880	.	+	0	ID=cds572;Parent=gene589;Dbxref=Genbank:NP_624915.1,GeneID:1096026;Name=NP_624915.1;Note=SCF55.27%2C probable amino transferase%2C len: 233 aa%3B similar to TR:P95530 (EMBL:D85415) Pseudomonas putida amino group transfer TdnT%2C 253 aa%3B fasta scores: opt: 251 z-score: 300.9 E(): 2.2e-09%3B 31.9%25 identity in 160 aa overlap. Contains match to Pfam entry PF00117 GATase%2C Glutamine amidotransferase class-I and to Prosite entry PS00442 Glutamine amidotransferases class-I active site;gbkey=CDS;gene=SCF55.27;product=amino transferase;protein_id=NP_624915.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	643242	643802	.	+	.	ID=id661;Dbxref=GeneID:1096026;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score -2.20%2C E-value 5.2e-06;gbkey=misc_feature;gene=SCF55.27
NC_003888.3	RefSeq	sequence_feature	643425	643460	.	+	.	ID=id662;Dbxref=GeneID:1096026;Note=PS00442 Glutamine amidotransferases class-I active site;gbkey=misc_feature;gene=SCF55.27
NC_003888.3	RefSeq	gene	643926	645101	.	-	.	ID=gene590;Dbxref=GeneID:1096027;Name=SCF55.28c;gbkey=Gene;gene=SCF55.28c;gene_biotype=protein_coding;gene_synonym=SCF55.28c;locus_tag=SCO0604
NC_003888.3	RefSeq	CDS	643926	645101	.	-	0	ID=cds573;Parent=gene590;Dbxref=Genbank:NP_624916.1,GeneID:1096027;Name=NP_624916.1;Note=SCF55.28c%2C unknown%2C len: 391 aa%3B similar to TR:AAK83171 (EMBL:AF333038) AVIX9 from Streptomyces viridochromogenes.;gbkey=CDS;gene=SCF55.28c;product=hypothetical protein;protein_id=NP_624916.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	645106	645110	.	-	.	ID=id663;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	645280	645284	.	+	.	ID=id664;gbkey=RBS
NC_003888.3	RefSeq	gene	645297	646232	.	+	.	ID=gene591;Dbxref=GeneID:1096028;Name=SCF55.29;gbkey=Gene;gene=SCF55.29;gene_biotype=protein_coding;gene_synonym=SCF55.29;locus_tag=SCO0605
NC_003888.3	RefSeq	CDS	645297	646232	.	+	0	ID=cds574;Parent=gene591;Dbxref=Genbank:NP_624917.1,GeneID:1096028;Name=NP_624917.1;Note=StF55.29%2C probable araC-family transcriptional regulator%2C len: 311 aa%3B similar to TR:CAB46927 (EMBL:AL096822) Streptomyces coelicolor arac-family transcriptional regulator SCGD3.05%2C 334 aa%3B fasta scores: opt: 893 z-score: 1016.6 E(): 0%3B 45.7%25 identity in 315 aa overlap and to SW:RHAS_SALTY (EMBL:X57299) Salmonella typhimurium L-rhamnose operon regulatory protein RhaS%2C 277 aa%3B fasta scores: opt: 234 z-score: 272.8 E(): 8e-08%3B 37.5%25 identity in 96 aa overlap. Contains match to Pfam entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and to Prosite entry PS00041 Bacterial regulatory proteins%2C araC family signature. Contains also a possible helix-turn-helix motif at residues 27077..27142%2C score 1753 (+5.16 SD);gbkey=CDS;gene=SCF55.29;product=AraC family transcription regulator;protein_id=NP_624917.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	645966	646226	.	+	.	ID=id665;Dbxref=GeneID:1096028;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 117.10%2C E-value 3.3e-31;gbkey=misc_feature;gene=SCF55.29
NC_003888.3	RefSeq	sequence_feature	645969	646034	.	+	.	ID=id666;Dbxref=GeneID:1096028;Note=Helix-turn-helix from SCF55.29 score 1753;gbkey=misc_feature;gene=SCF55.29
NC_003888.3	RefSeq	sequence_feature	646077	646205	.	+	.	ID=id667;Dbxref=GeneID:1096028;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SCF55.29
NC_003888.3	RefSeq	ribosome_entry_site	646331	646335	.	+	.	ID=id668;gbkey=RBS
NC_003888.3	RefSeq	gene	646345	647319	.	+	.	ID=gene592;Dbxref=GeneID:1096029;Name=SCF55.30;gbkey=Gene;gene=SCF55.30;gene_biotype=protein_coding;gene_synonym=SCF55.30;locus_tag=SCO0606
NC_003888.3	RefSeq	CDS	646345	647319	.	+	0	ID=cds575;Parent=gene592;Dbxref=Genbank:NP_624918.1,GeneID:1096029;Name=NP_624918.1;Note=StF55.30%2C unknown%2C len: 324 aa. Contains possible coiled-coil at residues 201..313. Max score: 1.838 (probability 1.00);gbkey=CDS;gene=SCF55.30;product=hypothetical protein;protein_id=NP_624918.1;transl_table=11
NC_003888.3	RefSeq	gene	647444	647731	.	+	.	ID=gene593;Dbxref=GeneID:1096030;Name=SCF55.31;gbkey=Gene;gene=SCF55.31;gene_biotype=protein_coding;gene_synonym=SCF55.31;locus_tag=SCO0607
NC_003888.3	RefSeq	CDS	647444	647731	.	+	0	ID=cds576;Parent=gene593;Dbxref=Genbank:NP_624919.1,GeneID:1096030;Name=NP_624919.1;Note=SCF55.31 possible lipoprotein%2C len: 112 aa. Contains match to Prosite to entry correctly situated PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide;gbkey=CDS;gene=SCF55.31;product=lipoprotein;protein_id=NP_624919.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	647477	647509	.	+	.	ID=id669;Dbxref=GeneID:1096030;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF55.31
NC_003888.3	RefSeq	ribosome_entry_site	647873	647876	.	+	.	ID=id670;gbkey=RBS
NC_003888.3	RefSeq	gene	647887	648765	.	+	.	ID=gene594;Dbxref=GeneID:1096031;Name=SCF55.32;gbkey=Gene;gene=SCF55.32;gene_biotype=protein_coding;gene_synonym=SCF55.32;locus_tag=SCO0608
NC_003888.3	RefSeq	CDS	647887	648765	.	+	0	ID=cds577;Parent=gene594;Dbxref=Genbank:NP_624920.1,GeneID:1096031;Name=NP_624920.1;Note=StF55.32%2C possible regulatory protein%2C len: 292 aa%3B similar to SW:ALGP_PSEAE (EMBL:M30145) Pseudomonas aeruginosa transcriptional regulatory protein (alginate regulatory protein) AlgP%2C 340 aa%3B fasta scores: opt: 239 z-score: 217.9 E(): 9.1e-05%3B 35.8%25 identity in 193 aa overlap. Contains Lysine/Alanine rich region;gbkey=CDS;gene=SCF55.32;product=regulatory protein;protein_id=NP_624920.1;transl_table=11
NC_003888.3	RefSeq	gene	648876	649739	.	+	.	ID=gene595;Dbxref=GeneID:1096032;Name=SCF55.33;gbkey=Gene;gene=SCF55.33;gene_biotype=protein_coding;gene_synonym=SCF55.33;locus_tag=SCO0609
NC_003888.3	RefSeq	CDS	648876	649739	.	+	0	ID=cds578;Parent=gene595;Dbxref=Genbank:NP_624921.1,GeneID:1096032;Name=NP_624921.1;Note=StF55.33%2C possible integral membrane protein%2C len: 287 aa%3B similar to TR:CAB46783 (EMBL:AL096811) Streptomyces coelicolor  integral membrane protein%2C 297 aa%3B fasta scores: opt: 400 z-score: 446.2 E(): 1.8e-17%3B 34.2%25 identity in 278 aa overlap;gbkey=CDS;gene=SCF55.33;product=hypothetical protein;protein_id=NP_624921.1;transl_table=11
NC_003888.3	RefSeq	gene	649840	650610	.	+	.	ID=gene596;Dbxref=GeneID:1096033;Name=SCF55.34;gbkey=Gene;gene=SCF55.34;gene_biotype=protein_coding;gene_synonym=SCF55.34;locus_tag=SCO0610
NC_003888.3	RefSeq	CDS	649840	650610	.	+	0	ID=cds579;Parent=gene596;Dbxref=Genbank:NP_624922.1,GeneID:1096033;Name=NP_624922.1;Note=SCF55.34%2C possible gntR-family transcriptional regulator%2C len: 256 aa%3B similar to TR:CAB50931 (EMBL:AL096849) Streptomyces coelicolor GntR- family transcriptional regulator%2C 249 aa%3B fasta scores: opt: 328 z-score: 379.5 E(): 9.2e-14%3B 31.6%25 identity in 256 aa overlap and low similarity to SW:FARR_ECOLI (EMBL:X15790) Eschericha coli fatty acyl responsive regulator (P30 PROTEIN) 240 aa%3B fasta scores: opt: 214 z-score: 251.7 E(): 1.2e-06%3B 27.5%25 identity in 211 aa overlap. Contains match to Pfam entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCF55.34;product=GntR family transcriptional regulator;protein_id=NP_624922.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	649909	650085	.	+	.	ID=id671;Dbxref=GeneID:1096033;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 47.10%2C E-value 5.5e-13;gbkey=misc_feature;gene=SCF55.34
NC_003888.3	RefSeq	ribosome_entry_site	650613	650617	.	+	.	ID=id672;gbkey=RBS
NC_003888.3	RefSeq	gene	650624	651388	.	+	.	ID=gene597;Dbxref=GeneID:1096034;Name=SCF55.35;gbkey=Gene;gene=SCF55.35;gene_biotype=protein_coding;gene_synonym=SCF55.35;locus_tag=SCO0611
NC_003888.3	RefSeq	CDS	650624	651388	.	+	0	ID=cds580;Parent=gene597;Dbxref=Genbank:NP_624923.1,GeneID:1096034;Name=NP_624923.1;Note=SCF55.35%2C membrane protein%2C len: 254 aa%3B similar to various hypothetical proteins%2C e.g. TR:O26968 (EMBL:AE000864) Methanobacterium thermoautotrophicum conserved protein MTH882%2C 261 aa%3B fasta scores%3B opt: 202 z-score: 221.3 E(): 5.9e-05%3B 27.4%25 identity in 252 aa overlap;gbkey=CDS;gene=SCF55.35;product=hypothetical protein;protein_id=NP_624923.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	651451	651455	.	+	.	ID=id673;gbkey=RBS
NC_003888.3	RefSeq	gene	651462	651605	.	+	.	ID=gene598;Dbxref=GeneID:1096035;Name=SCF55.36;gbkey=Gene;gene=SCF55.36;gene_biotype=protein_coding;gene_synonym=SCF55.36;locus_tag=SCO0612
NC_003888.3	RefSeq	CDS	651462	651605	.	+	0	ID=cds581;Parent=gene598;Dbxref=Genbank:NP_624924.1,GeneID:1096035;Name=NP_624924.1;Note=SCF55.36%2C hypothetical protein%2C len: 47 aa;gbkey=CDS;gene=SCF55.36;product=hypothetical protein;protein_id=NP_624924.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	651593	651597	.	+	.	ID=id674;Dbxref=GeneID:1096035;gbkey=RBS;gene=SCF55.36
NC_003888.3	RefSeq	gene	651602	652864	.	+	.	ID=gene599;Dbxref=GeneID:1096036;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;gene_synonym=arcA,SCF55.37;locus_tag=SCO0613
NC_003888.3	RefSeq	CDS	651602	652864	.	+	0	ID=cds582;Parent=gene599;Dbxref=Genbank:NP_624925.1,GeneID:1096036;Name=NP_624925.1;Note=catalyzes the degradation of arginine to citruline and ammonia;gbkey=CDS;gene=arcA;product=arginine deiminase;protein_id=NP_624925.1;transl_table=11
NC_003888.3	RefSeq	gene	652881	653165	.	-	.	ID=gene600;Dbxref=GeneID:1096037;Name=SCF55.38c;gbkey=Gene;gene=SCF55.38c;gene_biotype=protein_coding;gene_synonym=SCF55.38c;locus_tag=SCO0614
NC_003888.3	RefSeq	CDS	652881	653165	.	-	0	ID=cds583;Parent=gene600;Dbxref=Genbank:NP_624926.1,GeneID:1096037;Name=NP_624926.1;Note=SCF55.38c%2C unknown%2C len: 94 aa;gbkey=CDS;gene=SCF55.38c;product=hypothetical protein;protein_id=NP_624926.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	653174	653178	.	-	.	ID=id675;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	653439	653442	.	+	.	ID=id676;gbkey=RBS
NC_003888.3	RefSeq	gene	653448	653906	.	+	.	ID=gene601;Dbxref=GeneID:1096038;Name=SCF55.39;gbkey=Gene;gene=SCF55.39;gene_biotype=protein_coding;gene_synonym=SCF55.39;locus_tag=SCO0615
NC_003888.3	RefSeq	CDS	653448	653906	.	+	0	ID=cds584;Parent=gene601;Dbxref=Genbank:NP_624927.1,GeneID:1096038;Name=NP_624927.1;Note=SCF55.39%2C probable hypothetical protein%2C len: 152 aa. Contains N-terminal region signal peptide sequence;gbkey=CDS;gene=SCF55.39;product=hypothetical protein;protein_id=NP_624927.1;transl_table=11
NC_003888.3	RefSeq	gene	653947	656322	.	-	.	ID=gene602;Dbxref=GeneID:1096039;Name=SCF55.40c;gbkey=Gene;gene=SCF55.40c;gene_biotype=protein_coding;gene_synonym=SCF55.40c;locus_tag=SCO0616
NC_003888.3	RefSeq	CDS	653947	656322	.	-	0	ID=cds585;Parent=gene602;Dbxref=Genbank:NP_624928.1,GeneID:1096039;Name=NP_624928.1;Note=SCF55.40c%2C hypothetical protein%2C len: 791 aa%3B similar to various hypothetical proteins%2C e.g. SW:YK06_MYCTU (EMBL:Z74025) Mycobacterium tuberculosis hypothetical 145.8 KD protein RV2006%2C 1327 aa%3B fasta scores: opt: 2445 z-score: 2870.6 E(): 0%3B 50.0%25 identity in 790 aa overlap;gbkey=CDS;gene=SCF55.40c;product=hypothetical protein;protein_id=NP_624928.1;transl_table=11
NC_003888.3	RefSeq	gene	656319	658772	.	-	.	ID=gene603;Dbxref=GeneID:1096040;Name=SCF55.41c;gbkey=Gene;gene=SCF55.41c;gene_biotype=protein_coding;gene_synonym=SCF55.41c,SCF56.01c;locus_tag=SCO0617
NC_003888.3	RefSeq	CDS	656319	658772	.	-	0	ID=cds586;Parent=gene603;Dbxref=Genbank:NP_733508.1,GeneID:1096040;Name=NP_733508.1;Note=SCF56.01c%2C hypothetical protein (partial CDS)%2C len: >634 aa%3B similar to various hypothetical proteins%2C e.g. TR:P74690 (EMBL:D90917) Synechocystis sp. hypothetical 92.4 kD protein%2C 821 aa%3B fasta scores: opt: 2107 z-score: 2288.7 E(): 0%3B 58.1%25 identity in 513 aa overlap~SCF55.41c%2C hypothetical protein%2C len: 210 aa%3B similar to various hypothetical proteins%2C e.g. TR:P74690 (EMBL:D90917) Synechocystis sp. (strain PCC 6803) hypothetical 92.4 KD protein%2C 821 aa%3B fasta scores: opt: 1405 z-score: 1694.1 E(): 0%3B 56.1%25 identity in 328 aa overlap;gbkey=CDS;gene=SCF55.41c;product=phosphoketolase;protein_id=NP_733508.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	656330	656334	.	-	.	ID=id677;Dbxref=GeneID:1096040;gbkey=RBS;gene=SCF55.41c
NC_003888.3	RefSeq	ribosome_entry_site	659131	659134	.	+	.	ID=id678;gbkey=RBS
NC_003888.3	RefSeq	gene	659143	660528	.	+	.	ID=gene604;Dbxref=GeneID:1096041;Name=SCF56.02;gbkey=Gene;gene=SCF56.02;gene_biotype=protein_coding;gene_synonym=SCF56.02;locus_tag=SCO0618
NC_003888.3	RefSeq	CDS	659143	660528	.	+	0	ID=cds587;Parent=gene604;Dbxref=Genbank:NP_624929.1,GeneID:1096041;Name=NP_624929.1;Note=SCF56.02%2C hypothetical protein%2C len: 461 aa%3B similar to various hypothetical proteins%2C e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein%2C 442 aa%3B fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10%3B 26.6%25 identity in 466 aa overlap;gbkey=CDS;gene=SCF56.02;product=hypothetical protein;protein_id=NP_624929.1;transl_table=11
NC_003888.3	RefSeq	gene	660525	661268	.	+	.	ID=gene605;Dbxref=GeneID:1096042;Name=SCF56.03;gbkey=Gene;gene=SCF56.03;gene_biotype=protein_coding;gene_synonym=SCF56.03;locus_tag=SCO0619
NC_003888.3	RefSeq	CDS	660525	661268	.	+	0	ID=cds588;Parent=gene605;Dbxref=Genbank:NP_624930.1,GeneID:1096042;Name=NP_624930.1;Note=SCF56.03%2C possible membrane protein%2C len: 247 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB61305 (EMBL:AL132991) Streptomyces coelicolor hypothetical 25.1 kD protein SCF55.35%2C 254 aa%3B fasta scores: opt: 278 z-score: 284.2 E(): 1.9e-08%3B 31.5%25 identity in 251 aa overlap;gbkey=CDS;gene=SCF56.03;product=hypothetical protein;protein_id=NP_624930.1;transl_table=11
NC_003888.3	RefSeq	gene	661329	661607	.	-	.	ID=gene606;Dbxref=GeneID:1096043;Name=SCF56.04c;gbkey=Gene;gene=SCF56.04c;gene_biotype=protein_coding;gene_synonym=SCF56.04c;locus_tag=SCO0620
NC_003888.3	RefSeq	CDS	661329	661607	.	-	0	ID=cds589;Parent=gene606;Dbxref=Genbank:NP_624931.1,GeneID:1096043;Name=NP_624931.1;Note=SCF56.04c%2C hypothetical protein%2C len: 92 aa%3B similar to various hypothetical proteins%2C e.g. TR:BAA86632 (EMBL:AB033763) Staphylococcus aureus hypothetical 9.9 kD protein%2C 88 aa%3B fasta scores: opt: 203 z-score: 280.2 E(): 3.2e-08%3B 43.7%25 identity in 71 aa overlap;gbkey=CDS;gene=SCF56.04c;product=hypothetical protein;protein_id=NP_624931.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	661612	661615	.	-	.	ID=id679;gbkey=RBS
NC_003888.3	RefSeq	gene	661707	662291	.	+	.	ID=gene607;Dbxref=GeneID:1096044;Name=SCF56.05;gbkey=Gene;gene=SCF56.05;gene_biotype=protein_coding;gene_synonym=SCF56.05;locus_tag=SCO0621
NC_003888.3	RefSeq	CDS	661707	662291	.	+	0	ID=cds590;Parent=gene607;Dbxref=Genbank:NP_624932.1,GeneID:1096044;Name=NP_624932.1;Note=SCF56.05%2C hypothetical protein%2C len: 194 aa%3B similar to various hypothetical proteins%2C e.g. SW:YC61_SYNY3 (EMBL:D90909) Synechocystis sp. hypothetical 19.1 kD proetin%2C 179 aa%3B fasta scores: opt: 349 z-score: 408.6 E(): 2.2e-15%3B 41.3%25 identity in 155 aa overlap;gbkey=CDS;gene=SCF56.05;product=hypothetical protein;protein_id=NP_624932.1;transl_table=11
NC_003888.3	RefSeq	gene	662373	663014	.	+	.	ID=gene608;Dbxref=GeneID:1096045;Name=SCF56.06;gbkey=Gene;gene=SCF56.06;gene_biotype=protein_coding;gene_synonym=SCF56.06;locus_tag=SCO0622
NC_003888.3	RefSeq	CDS	662373	663014	.	+	0	ID=cds591;Parent=gene608;Dbxref=Genbank:NP_624933.1,GeneID:1096045;Name=NP_624933.1;Note=SCF56.06%2C probable tetR-family transcriptional regulator%2C len: 213 aa%3B similar to TR:CAB58268 (EMBL:AL121849) Streptomyces coelicolor tetR family transcriptional regulator SCF6.04%2C 180 aa%3B fasta scores: opt: 240 z-score: 284.5 E(): 1.8e-08%3B 34.5%25 identity in 177 aa overlap and to SW:TCMR_STRG (EMBL:M80674) Streptomyces glaucescens tetracenomycin C transcriptional repressor TcmR%2C 226 aa%3B fasta scores: opt: 212 z-score: 251.4 E(): 1.3e-06%3B 35.2%25 identity in 182 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif at residues 42..63 (+2.60 SD);gbkey=CDS;gene=SCF56.06;product=TetR family transcriptional regulator;protein_id=NP_624933.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	662448	662558	.	+	.	ID=id680;Dbxref=GeneID:1096045;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 17.90%2C E-value 0.0031;gbkey=misc_feature;gene=SCF56.06
NC_003888.3	RefSeq	sequence_feature	662496	662561	.	+	.	ID=id681;Dbxref=GeneID:1096045;Note=Helix-turn-helix from SCF56.22c score 1003 at residues 42..63 (+2.60 SD);gbkey=misc_feature;gene=SCF56.06
NC_003888.3	RefSeq	gene	663067	664686	.	+	.	ID=gene609;Dbxref=GeneID:1096046;Name=SCF56.07;gbkey=Gene;gene=SCF56.07;gene_biotype=protein_coding;gene_synonym=SCF56.07;locus_tag=SCO0623
NC_003888.3	RefSeq	CDS	663067	664686	.	+	0	ID=cds592;Parent=gene609;Dbxref=Genbank:NP_624934.1,GeneID:1096046;Name=NP_624934.1;Note=SCF56.07%2C probable membrane transport protein%2C len: 539 aa%3B similar to TR:Q9X8M3 (EMBL:AL049628) Streptomyces coelicolor  exporter SCE94.17c%2C 531 aa%3B fasta scores: opt: 1316 z-score: 1386.9 E(): 0%3B 40.1%25 identity in 534 aa overlap and to SW:PUR8_STRLP (EMBL:X76855) Streptomyces lipmanii (Streptomyces alboniger) puromycin resistance protein Pur8%2C 503 aa%3B fasta scores: opt: 701 z-score: 741.2 E(): 0%3B 32.5%25 identity in 434 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter;gbkey=CDS;gene=SCF56.07;product=membrane transport protein;protein_id=NP_624934.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	663154	664572	.	+	.	ID=id682;Dbxref=GeneID:1096046;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -81.70%2C E-value 0.0006;gbkey=misc_feature;gene=SCF56.07
NC_003888.3	RefSeq	gene	664769	665773	.	-	.	ID=gene610;Dbxref=GeneID:1096047;Name=SCF56.08c;gbkey=Gene;gene=SCF56.08c;gene_biotype=protein_coding;gene_synonym=SCF56.08c;locus_tag=SCO0624
NC_003888.3	RefSeq	CDS	664769	665773	.	-	0	ID=cds593;Parent=gene610;Dbxref=Genbank:NP_624935.1,GeneID:1096047;Name=NP_624935.1;Note=SCF56.08c%2C possible hypothetical protein%2C len: 334 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCF56.08c;product=hypothetical protein;protein_id=NP_624935.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	665779	665782	.	-	.	ID=id683;gbkey=RBS
NC_003888.3	RefSeq	gene	665816	667096	.	-	.	ID=gene611;Dbxref=GeneID:1096048;Name=SCF56.09c;gbkey=Gene;gene=SCF56.09c;gene_biotype=protein_coding;gene_synonym=SCF56.09c;locus_tag=SCO0625
NC_003888.3	RefSeq	CDS	665816	667096	.	-	0	ID=cds594;Parent=gene611;Dbxref=Genbank:NP_624936.1,GeneID:1096048;Name=NP_624936.1;Note=SCF56.09c%2C possible transporter%2C len: 426 aa%3B low similarity to TR:Q9ZEJ2 (EMBL:AJ132740) Wolinella succinogenes large integral C4-dicarboxylate membrane transport protein%2C DctM%2C 415 aa%3B fasta scores: opt: 186 z-score: 201.0 E(): 0.00082%3B 23.7%25 identity in 427 aa overlap and to SW:IDNT_ECOLI (EMBL:U14003) Escherichia coli GntII-system L-idonate transporter (L-ido transporter) IdnT%2C 439 aa%3B fasta scores: opt: 176 z-score: 190.3 E(): 0.0032%3B 24.8%25 identity in 432 aa overlap;gbkey=CDS;gene=SCF56.09c;product=transporter;protein_id=NP_624936.1;transl_table=11
NC_003888.3	RefSeq	gene	667100	667744	.	-	.	ID=gene612;Dbxref=GeneID:1096049;Name=SCF56.10c;gbkey=Gene;gene=SCF56.10c;gene_biotype=protein_coding;gene_synonym=SCF56.10c;locus_tag=SCO0626
NC_003888.3	RefSeq	CDS	667100	667744	.	-	0	ID=cds595;Parent=gene612;Dbxref=Genbank:NP_624937.1,GeneID:1096049;Name=NP_624937.1;Note=SCF56.10c%2C unknown%2C len: 214 aa;gbkey=CDS;gene=SCF56.10c;product=hypothetical protein;protein_id=NP_624937.1;transl_table=11
NC_003888.3	RefSeq	gene	667741	669870	.	-	.	ID=gene613;Dbxref=GeneID:1096050;Name=SCF56.11c;gbkey=Gene;gene=SCF56.11c;gene_biotype=protein_coding;gene_synonym=SCF56.11c;locus_tag=SCO0627
NC_003888.3	RefSeq	CDS	667741	669870	.	-	0	ID=cds596;Parent=gene613;Dbxref=Genbank:NP_624938.1,GeneID:1096050;Name=NP_624938.1;Note=SCF56.11c%2C possible ATP utilising protein%2C len: 709 aa%3B low similarities to TR:O34180 (EMBL:U95372) Halobacterium volcanii hydantoinase%2C 514 aa%3B fasta scores: opt: 462 z-score: 480.2 E(): 2.3e-19%3B 28.9%25 identity in 575 aa overlap and to SW:OPLA_RAT (EMBL:U70825) Rattus norvegicus 5-oxoprolinase (EC 3.5.2.9)%2C 1288 aa%3B fasta scores: opt: 255 z-score: 261.5 E(): 3.5e-07%3B 26.9%25 identity in 547 aa overlap. Contains match to Prosite entry PS00107 Protein kinases ATP-binding region signature;gbkey=CDS;gene=SCF56.11c;product=ATP-utilizing protein;protein_id=NP_624938.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	667752	667756	.	-	.	ID=id684;Dbxref=GeneID:1096050;gbkey=RBS;gene=SCF56.11c
NC_003888.3	RefSeq	sequence_feature	669517	669597	.	-	.	ID=id685;Dbxref=GeneID:1096050;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCF56.11c
NC_003888.3	RefSeq	ribosome_entry_site	669880	669884	.	-	.	ID=id686;gbkey=RBS
NC_003888.3	RefSeq	gene	669972	671570	.	-	.	ID=gene614;Dbxref=GeneID:1096051;Name=SCF56.12c;gbkey=Gene;gene=SCF56.12c;gene_biotype=protein_coding;gene_synonym=SCF56.12c;locus_tag=SCO0628
NC_003888.3	RefSeq	CDS	669972	671570	.	-	0	ID=cds597;Parent=gene614;Dbxref=Genbank:NP_624939.1,GeneID:1096051;Name=NP_624939.1;Note=SCF56.12c%2C possible hypothetical protein%2C len: 532 aa%3B similar to TR:Q55846 (EMBL:D64004) Synechocystis sp. hypothetical 76.4 kD protein%2C 684 aa%3B fasta scores: opt: 236 z-score: 266.6 E(): 1.8e-07%3B 27.3%25 identity in 662 aa overlap;gbkey=CDS;gene=SCF56.12c;product=hypothetical protein;protein_id=NP_624939.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	671578	671581	.	-	.	ID=id687;gbkey=RBS
NC_003888.3	RefSeq	gene	671618	672727	.	-	.	ID=gene615;Dbxref=GeneID:1096052;Name=SCF56.13c;gbkey=Gene;gene=SCF56.13c;gene_biotype=protein_coding;gene_synonym=SCF56.13c;locus_tag=SCO0629
NC_003888.3	RefSeq	CDS	671618	672727	.	-	0	ID=cds598;Parent=gene615;Dbxref=Genbank:NP_624940.1,GeneID:1096052;Name=NP_624940.1;Note=SCF56.13c%2C possible transcriptional regulator%2C len: 369 aa%3B similar to TR:Q9Z509 (EMBL:AL035591) Streptomyces coelicolor  transcriptional regulator (LacI family) SCC54.16%2C 368 aa%3B fasta scores: opt: 367 z-score: 401.8 E(): 5.4e-15%3B 33.2%25 identity in 352 aa overlap and to SW:CCPA_BACME (EMBL:L26052) Bacillus megaterium glucose-resistance amylase regulator CcpA%2C 332 aa%3B fasta scores: opt: 263 z-score: 290.5 E(): 8.4e-09%3B 26.3%25 identity in 339 aa overlap. Contains possible helix-turn-helix motif at residuees 25..46 (+5.42 SD);gbkey=CDS;gene=SCF56.13c;product=transcriptional regulator;protein_id=NP_624940.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	672590	672655	.	-	.	ID=id688;Dbxref=GeneID:1096052;Note=Helix-turn-helix from SCF56.15 score 1829;gbkey=misc_feature;gene=SCF56.13c
NC_003888.3	RefSeq	ribosome_entry_site	672730	672733	.	-	.	ID=id689;gbkey=RBS
NC_003888.3	RefSeq	gene	672882	673403	.	-	.	ID=gene616;Dbxref=GeneID:1096053;Name=SCF56.14c;gbkey=Gene;gene=SCF56.14c;gene_biotype=protein_coding;gene_synonym=SCF56.14c;locus_tag=SCO0630
NC_003888.3	RefSeq	CDS	672882	673403	.	-	0	ID=cds599;Parent=gene616;Dbxref=Genbank:NP_624941.1,GeneID:1096053;Name=NP_624941.1;Note=SCF56.14c%2C possible acetyltransferase%2C len: 173 aa%3B similar to SW:YJHQ_ECOLI (EMBL:U14003) Escherichia coli hypothetical 20.0 kD protein YjhQ%2C 181 aa%3B fasta scores: opt: 248 z-score: 301.7 E(): 2e-09%3B 36.2%25 identity in 163 aa overlap and weakly similar to SW:PUAC_STRLP (EMBL:M25346) Streptomyces lipmanii (Streptomyces alboniger) puromycin N-acetyltransferase (EC 2.3.-.-) PuaC%2C 199 aa%3B fasta scores: opt: 123 z-score: 155.6 E(): 0.28%3B 31.8%25 identity in 107 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCF56.14c;product=acetyltransferase;protein_id=NP_624941.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	673011	673376	.	-	.	ID=id690;Dbxref=GeneID:1096053;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 23.30%2C E-value 0.0057;gbkey=misc_feature;gene=SCF56.14c
NC_003888.3	RefSeq	gene	673451	673633	.	-	.	ID=gene617;Dbxref=GeneID:1096054;Name=SCF56.15c;gbkey=Gene;gene=SCF56.15c;gene_biotype=protein_coding;gene_synonym=SCF56.15c;locus_tag=SCO0631
NC_003888.3	RefSeq	CDS	673451	673633	.	-	0	ID=cds600;Parent=gene617;Dbxref=Genbank:NP_624942.1,GeneID:1096054;Name=NP_624942.1;Note=SCF56.15c%2C unknown%2C len: 60 aa;gbkey=CDS;gene=SCF56.15c;product=hypothetical protein;protein_id=NP_624942.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	673721	673724	.	+	.	ID=id691;gbkey=RBS
NC_003888.3	RefSeq	gene	673733	674317	.	+	.	ID=gene618;Dbxref=GeneID:1096055;Name=SCF56.16;gbkey=Gene;gene=SCF56.16;gene_biotype=protein_coding;gene_synonym=SCF56.16;locus_tag=SCO0632
NC_003888.3	RefSeq	CDS	673733	674317	.	+	0	ID=cds601;Parent=gene618;Dbxref=Genbank:NP_624943.1,GeneID:1096055;Name=NP_624943.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B in M. bovis this protein has been shown to be involved in expression of antigenic proteins;gbkey=CDS;gene=SCF56.16;product=RNA polymerase sigma factor SigK;protein_id=NP_624943.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	674207	674272	.	+	.	ID=id692;Dbxref=GeneID:1096055;Note=Helix-turn-helix from SCF56.12c score 1052;gbkey=misc_feature;gene=SCF56.16
NC_003888.3	RefSeq	gene	674317	675069	.	+	.	ID=gene619;Dbxref=GeneID:1096056;Name=SCF56.17;gbkey=Gene;gene=SCF56.17;gene_biotype=protein_coding;gene_synonym=SCF56.17;locus_tag=SCO0633
NC_003888.3	RefSeq	CDS	674317	675069	.	+	0	ID=cds602;Parent=gene619;Dbxref=Genbank:NP_624944.1,GeneID:1096056;Name=NP_624944.1;Note=SCF56.17%2C possible membrane protein%2C len: 250 aa%3B similar to SW:Y24K_STRGR (EMBL:X15060) Streptomyces griseus hypothetical 24.7 kD protein%2C 238 aa%3B fasta scores: opt: 694 z-score: 782.9 E(): 0%3B 53.5%25 identity in 217 aa overlap and to TR:CAB50937 (EMBL:AL096849) Streptomyces coelicolor membrane protein SCI11.11c%2C 250 aa%3B fasta scores: opt: 460 z-score: 522.1 E(): 1.1e-21%3B 42.1%25 identity in 247 aa overlap;gbkey=CDS;gene=SCF56.17;product=hypothetical protein;protein_id=NP_624944.1;transl_table=11
NC_003888.3	RefSeq	gene	675420	676031	.	-	.	ID=gene620;Dbxref=GeneID:1096057;Name=pseudogene;gbkey=Gene;gene=pseudogene;gene_biotype=pseudogene;gene_synonym=pseudogene;locus_tag=SCO0634;pseudo=true
NC_003888.3	RefSeq	sequence_feature	675420	676031	.	-	.	ID=id693;Dbxref=GeneID:1096057;Note=probable pseudogene (dehydrogenase) len: 204 aa%3B similar to parts of TR:O53734 (EMBL:AL021932) Mycobacterium utberculosis  dehydrogenase MTV037.13c%2C 439 aa%2C in several reading frames;gbkey=misc_feature;gene=pseudogene
NC_003888.3	RefSeq	gene	676130	677023	.	+	.	ID=gene621;Dbxref=GeneID:1096058;Name=SCF56.19;gbkey=Gene;gene=SCF56.19;gene_biotype=protein_coding;gene_synonym=SCF56.19;locus_tag=SCO0635
NC_003888.3	RefSeq	CDS	676130	677023	.	+	0	ID=cds603;Parent=gene621;Dbxref=Genbank:NP_624945.1,GeneID:1096058;Name=NP_624945.1;Note=SCF56.19%2C hypothetical protein%2C len: 297 aa%3B similar to TR:Q9XAK3 (EMBL:AL079348) Streptomyces coelicolor hypothetical 33.9 kD protein SC66T3.10c%2C 318 aa%3B fasta scores: opt: 133 z-score: 153.6 E(): 0.36%3B 31.6%25 identity in 212 aa overlap;gbkey=CDS;gene=SCF56.19;product=hypothetical protein;protein_id=NP_624945.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	677215	677218	.	+	.	ID=id694;gbkey=RBS
NC_003888.3	RefSeq	gene	677227	678861	.	+	.	ID=gene622;Dbxref=GeneID:1096059;Name=SCF56.20;gbkey=Gene;gene=SCF56.20;gene_biotype=protein_coding;gene_synonym=SCF56.20;locus_tag=SCO0636
NC_003888.3	RefSeq	CDS	677227	678861	.	+	0	ID=cds604;Parent=gene622;Dbxref=Genbank:NP_624946.1,GeneID:1096059;Name=NP_624946.1;Note=SCF56.20%2C probable ABC transporter ATP-binding protein%2C len: 544 aa%3B similar to TR:Q9X7M6 (EMBL:AL049587) Streptomyces coelicolor ABC transporter SC5F2A.03c%2C 544 aa%3B fasta scores: opt: 1673 z-score: 1706.2 E(): 0%3B 52.2%25 identity in 542 aa overlap and to SW:MSRA_STAEP (EMBL:X52085) Staphylococcus epidermidis erythromycin resistance ATP-binding protein MsrA%2C 488 aa%3B fasta scores: opt: 351 z-score: 362.8 E(): 7.9e-13%3B 28.6%25 identity in 514 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran%2C ABC transporter and two matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF56.20;product=ABC transporter ATP-binding protein;protein_id=NP_624946.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	677317	677868	.	+	.	ID=id695;Dbxref=GeneID:1096059;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 127.10%2C E-value 3.2e-34;gbkey=misc_feature;gene=SCF56.20
NC_003888.3	RefSeq	sequence_feature	677338	677361	.	+	.	ID=id696;Dbxref=GeneID:1096059;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF56.20
NC_003888.3	RefSeq	sequence_feature	678328	678828	.	+	.	ID=id697;Dbxref=GeneID:1096059;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 110.90%2C E-value 2.5e-29;gbkey=misc_feature;gene=SCF56.20
NC_003888.3	RefSeq	sequence_feature	678349	678372	.	+	.	ID=id698;Dbxref=GeneID:1096059;Note=PS00017 ATP/GTP-binding site motif A (P-loop)%2C [AG].{4}GK[ST]%2C info count %3D 13.8;gbkey=misc_feature;gene=SCF56.20
NC_003888.3	RefSeq	gene	678937	679392	.	+	.	ID=gene623;Dbxref=GeneID:1096060;Name=SCF56.21;gbkey=Gene;gene=SCF56.21;gene_biotype=protein_coding;gene_synonym=SCF56.21;locus_tag=SCO0637
NC_003888.3	RefSeq	CDS	678937	679392	.	+	0	ID=cds605;Parent=gene623;Dbxref=Genbank:NP_624947.1,GeneID:1096060;Name=NP_624947.1;Note=SCF56.21%2C hypothetical protein%2C len: 151 aa%3B similar to TR:O33313 (EMBL:AL008967) Mycobacterium tuberculosis hypothetical 16.0 kD protein MTV002.36c%2C 150 aa%3B fasta scores: opt: 671 z-score: 800.1 E(): 0%3B 67.8%25 identity in 146 aa overlap;gbkey=CDS;gene=SCF56.21;product=hypothetical protein;protein_id=NP_624947.1;transl_table=11
NC_003888.3	RefSeq	gene	679529	680188	.	-	.	ID=gene624;Dbxref=GeneID:1096061;Name=SCF56.22c;gbkey=Gene;gene=SCF56.22c;gene_biotype=protein_coding;gene_synonym=SCF56.22c;locus_tag=SCO0638
NC_003888.3	RefSeq	CDS	679529	680188	.	-	0	ID=cds606;Parent=gene624;Dbxref=Genbank:NP_624948.1,GeneID:1096061;Name=NP_624948.1;Note=SCF56.22c%2C possible lipoprotein%2C len: 219 aa%3B similar to TR:O86667 (EMBL:AL031182) Streptomyces coelicolor hypothetical protein SC4A2.11c%2C 220 aa%3B fasta scores: opt: 549 z-score: 568.6 E(): 2.7e-24%3B 45.2%25 identity in 219 aa overlap and to SW:MP83_MYCTU (EMBL:X94597) Mycobacterium tuberculosis cell surface lipoprotein MPT83 precursor%2C 220 aa%3B fasta scores: opt: 497 z-score: 516.2 E(): 2.3e-21%3B 44.8%25 identity in 230 aa overlap. Contains N-terminal region signal peptide sequence and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SCF56.22c;product=lipoprotein;protein_id=NP_624948.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	680114	680146	.	-	.	ID=id699;Dbxref=GeneID:1096061;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF56.22c
NC_003888.3	RefSeq	ribosome_entry_site	680196	680199	.	-	.	ID=id700;gbkey=RBS
NC_003888.3	RefSeq	gene	680496	681428	.	-	.	ID=gene625;Dbxref=GeneID:1096062;Name=SCF56.23c;gbkey=Gene;gene=SCF56.23c;gene_biotype=protein_coding;gene_synonym=SCF56.23c;locus_tag=SCO0639
NC_003888.3	RefSeq	CDS	680496	681428	.	-	0	ID=cds607;Parent=gene625;Dbxref=Genbank:NP_624949.1,GeneID:1096062;Name=NP_624949.1;Note=SCF56.23c%2C probable integral membrane protein%2C len: 310 aa%3B similar to TR:O86628 (EMBL:AL031155) Streptomyces coelicolor  integral membrane protein SC3A7.27%2C 309 aa%3B fasta scores: opt: 577 z-score: 631.4 E(): 8.7e-28%3B 41.9%25 identity in 298 aa overlap;gbkey=CDS;gene=SCF56.23c;product=hypothetical protein;protein_id=NP_624949.1;transl_table=11
NC_003888.3	RefSeq	gene	681435	681863	.	-	.	ID=gene626;Dbxref=GeneID:1096063;Name=SCF56.24c;gbkey=Gene;gene=SCF56.24c;gene_biotype=protein_coding;gene_synonym=SCF56.24c;locus_tag=SCO0640
NC_003888.3	RefSeq	CDS	681435	681863	.	-	0	ID=cds608;Parent=gene626;Dbxref=Genbank:NP_624950.1,GeneID:1096063;Name=NP_624950.1;Note=SCF56.24c%2C hypothetical protein%2C len: 142 aa%3B similar to various hypothetical proteins%2C e.g. TR:O86627 (EMBL:AL031155) Streptomyces coelicolor hypothetical 14.3 kD protein SC3A7.26%2C 129 aa%3B fasta scores: opt: 381 z-score: 485.9 E(): 1.1e-19%3B 55.4%25 identity in 121 aa overlap;gbkey=CDS;gene=SCF56.24c;product=hypothetical protein;protein_id=NP_624950.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	681949	681954	.	+	.	ID=id701;gbkey=RBS
NC_003888.3	RefSeq	gene	681960	682535	.	+	.	ID=gene627;Dbxref=GeneID:1096064;Name=SCF56.25;gbkey=Gene;gene=SCF56.25;gene_biotype=protein_coding;gene_synonym=SCF56.25,terD;locus_tag=SCO0641
NC_003888.3	RefSeq	CDS	681960	682535	.	+	0	ID=cds609;Parent=gene627;Dbxref=Genbank:NP_733509.1,GeneID:1096064;Name=NP_733509.1;Note=SCF56.25%2C terD%2C tellurium resistance protein (partial CDS)%2C len: >185 aa%3B highly similar to SW:TERD_SERMA (EMBL:L38824) Serratia marcescens tellurium resistance protein TerD%2C 192 aa%3B fasta scores: opt: 876 z-score: 1043.0 E(): 0%3B 70.3%25 identity in 185 aa overlap~SCF91.01%2C terD%2C tellurite resistance protein%2C partial CDS%2C len: > 81 aa. Highly similar to many tellurite resistance proteins including: Serratia marcescens SW:TERD_SERMA(EMBL:L38824) tellurium resistance protein TerD (192 aa)%2C fasta scores opt: 398 z-score: 541.4 E(): 8.8e-23 72.5%25 identity in 80 aa overlap and Escherichia col TR:CAB42998(EMBL:AJ238043) tellurite resistance (192 aa)%2C fasta scores opt: 393 z-score: 534.8 E(): 2e-22 71.3%25 identity in 80 aa overlap.;gbkey=CDS;gene=SCF56.25;product=tellurium resistance protein;protein_id=NP_733509.1;transl_table=11
NC_003888.3	RefSeq	gene	682600	684345	.	-	.	ID=gene628;Dbxref=GeneID:1096065;Name=SCF91.02c;gbkey=Gene;gene=SCF91.02c;gene_biotype=protein_coding;gene_synonym=SCF91.02c;locus_tag=SCO0642
NC_003888.3	RefSeq	CDS	682600	684345	.	-	0	ID=cds610;Parent=gene628;Dbxref=Genbank:NP_624951.1,GeneID:1096065;Name=NP_624951.1;Note=SCF91.02c%2C unknown%2C len: 581 aa%3B similar to TR:Q983G4 (EMBL:AP003013) from Mesorhizobium loti (559 aa) fasta scores: opt: 1692%2C Z-score: 1945.6%2C 46.277%25 identity (47.283%25 ungapped) in 564 aa overlap.;gbkey=CDS;gene=SCF91.02c;product=hypothetical protein;protein_id=NP_624951.1;transl_table=11
NC_003888.3	RefSeq	gene	684409	685095	.	-	.	ID=gene629;Dbxref=GeneID:1096066;Name=SCF91.03c;gbkey=Gene;gene=SCF91.03c;gene_biotype=protein_coding;gene_synonym=SCF91.03c;locus_tag=SCO0643
NC_003888.3	RefSeq	CDS	684409	685095	.	-	0	ID=cds611;Parent=gene629;Dbxref=Genbank:NP_624952.1,GeneID:1096066;Name=NP_624952.1;Note=SCF91.03c%2C possible  cellulose-binding protein%2C len: 228 aa. Similar to several including: Streptomyces coelicolor TR:CAB50949 (EMBL:AL096849)  cellulose-binding protein SCI11.23 (356 aa)%2C fasta scores opt: 349 z-score: 417.9 E(): 6.7e-16 32.2%25 identity in 227 aa overlap. Also weakly similar to chitin-binding proteins e.g. Streptomyces olivaceoviridis TR:Q54501 (EMBL:X78535) chitin binding protein precursor (201 aa)%2C fasta scores opt: 203 z-score: 249.8 E(): 1.5e-06 29.3%25 identity in 222 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF91.03c;product=cellulose-binding protein;protein_id=NP_624952.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	685102	685106	.	-	.	ID=id702;gbkey=RBS
NC_003888.3	RefSeq	gene	685288	687444	.	-	.	ID=gene630;Dbxref=GeneID:1096067;Name=SCF91.04c.;gbkey=Gene;gene=SCF91.04c.;gene_biotype=protein_coding;gene_synonym=SCF91.04c.;locus_tag=SCO0644
NC_003888.3	RefSeq	CDS	685288	687444	.	-	0	ID=cds612;Parent=gene630;Dbxref=Genbank:NP_624953.1,GeneID:1096067;Name=NP_624953.1;Note=SCF91.04c%2C possible membrane protein%2C len: 729 aa. Contains possible membrane spanning hydrophobic domain%2C a possible N-terminal signal sequence and a PS00216 Sugar transport proteins signature 1. Also contains a probable coiled-coil from 76 to 107 (32 residues).;gbkey=CDS;gene=SCF91.04c.;product=hypothetical protein;protein_id=NP_624953.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	687016	687066	.	-	.	ID=id703;Dbxref=GeneID:1096067;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCF91.04c.
NC_003888.3	RefSeq	ribosome_entry_site	687451	687455	.	-	.	ID=id704;gbkey=RBS
NC_003888.3	RefSeq	gene	687554	688567	.	-	.	ID=gene631;Dbxref=GeneID:1096068;Name=SCF91.05c.;gbkey=Gene;gene=SCF91.05c.;gene_biotype=protein_coding;gene_synonym=SCF91.05c.;locus_tag=SCO0645
NC_003888.3	RefSeq	CDS	687554	688567	.	-	0	ID=cds613;Parent=gene631;Dbxref=Genbank:NP_624954.1,GeneID:1096068;Name=NP_624954.1;Note=SCF91.05c%2C possible Zinc-containing dehydrogenase%2C len: 337 aa. Similar to many dehydrogenases including: Alcaligenes eutrophus SW:ADH_ALCEU(EMBL:J03362) alcohol dehydrogenase (EC 1.1.1.1) (366 aa)%2C fasta scores opt: 272 z-score: 296.1 E(): 4e-09 27.0%25 identity in 371 aa overlap and Streptomyces coelicolor TR:Q53927(EMBL:X62373) hydroxyacyl-CoA dehydrogenase (329 aa)%2C fasta scores opt: 308 z-score: 335.0 E(): 2.8e-11 31.8%25 identity in 333 aa overlap. Contains a Prosite hit to PS00059 Zinc-containing alcohol dehydrogenases signature and a Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=CDS;gene=SCF91.05c.;product=Zinc-containing dehydrogenase;protein_id=NP_624954.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	687560	688552	.	-	.	ID=id705;Dbxref=GeneID:1096068;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 160.80%2C E-value 2.2e-44;gbkey=misc_feature;gene=SCF91.05c.
NC_003888.3	RefSeq	sequence_feature	688331	688375	.	-	.	ID=id706;Dbxref=GeneID:1096068;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=SCF91.05c.
NC_003888.3	RefSeq	ribosome_entry_site	688574	688580	.	-	.	ID=id707;gbkey=RBS
NC_003888.3	RefSeq	gene	688679	689263	.	+	.	ID=gene632;Dbxref=GeneID:1096069;Name=SCF91.06;gbkey=Gene;gene=SCF91.06;gene_biotype=protein_coding;gene_synonym=SCF91.06;locus_tag=SCO0646
NC_003888.3	RefSeq	CDS	688679	689263	.	+	0	ID=cds614;Parent=gene632;Dbxref=Genbank:NP_624955.1,GeneID:1096069;Name=NP_624955.1;Note=SCF91.06%2C possible TetR-family transcriptional regulator%2C len: 194 aa. Similar to many regulators e.g. Propionibacterium freudenreichii TR:P72185( EMBL:U51164) repressor protein (HemR protein) (259 aa)%2C fasta scores opt: 249 z-score: 304.0 E(): 1.5e-09 33.8%25 identity in 142 aa overlap. Also similar to several Streptomyces coelicolor regulators e.g. TR:CAB56137 (EMBL:AL117669) SCF12.11 (206 aa)%2C fasta scores opt: 337 z-score: 409.5 E(): 2e-15 36.7%25 identity in 196 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 39..60 (+3.20 SD).;gbkey=CDS;gene=SCF91.06;product=TetR family transcriptional regulator;protein_id=NP_624955.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	688723	688726	.	+	.	ID=id708;Dbxref=GeneID:1096069;gbkey=RBS;gene=SCF91.06
NC_003888.3	RefSeq	sequence_feature	688742	688846	.	+	.	ID=id709;Dbxref=GeneID:1096069;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 19.40%2C E-value 0.0012;gbkey=misc_feature;gene=SCF91.06
NC_003888.3	RefSeq	ribosome_entry_site	689355	689359	.	+	.	ID=id710;gbkey=RBS
NC_003888.3	RefSeq	gene	689364	690161	.	+	.	ID=gene633;Dbxref=GeneID:1096070;Name=SCF91.07;gbkey=Gene;gene=SCF91.07;gene_biotype=protein_coding;gene_synonym=SCF91.07;locus_tag=SCO0647
NC_003888.3	RefSeq	CDS	689364	690161	.	+	0	ID=cds615;Parent=gene633;Dbxref=Genbank:NP_624956.1,GeneID:1096070;Name=NP_624956.1;Note=SCF91.07%2C probable short chain oxidoreductase%2C len: 265 aa. Highly similar to many e.g. Klebsiella aerogenes SW:RIDH_KLEAE (EMBL:M25606) ribitol 2-dehydrogenase (EC 1.1.1.56) (249 aa)%2C fasta scores opt: 311 z-score: 345.7 E(): 7e-12 31.7%25 identity in 230 aa overlap and Mycobacterium avium TR:AAD20367 (EMBL:AF125999) dehydrogenase (259 aa)%2C fasta scores opt: 897 z-score: 975.2 E(): 0 56.8%25 identity in 257 aa overlap. Contains a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=CDS;gene=SCF91.07;product=short chain oxidoreductase;protein_id=NP_624956.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	689379	689924	.	+	.	ID=id711;Dbxref=GeneID:1096070;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 163.20%2C E-value 4.2e-45;gbkey=misc_feature;gene=SCF91.07
NC_003888.3	RefSeq	sequence_feature	689775	689861	.	+	.	ID=id712;Dbxref=GeneID:1096070;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCF91.07
NC_003888.3	RefSeq	gene	690228	690923	.	+	.	ID=gene634;Dbxref=GeneID:1096071;Name=SCF91.08.;gbkey=Gene;gene=SCF91.08.;gene_biotype=protein_coding;gene_synonym=SCF91.08.;locus_tag=SCO0648
NC_003888.3	RefSeq	CDS	690228	690923	.	+	0	ID=cds616;Parent=gene634;Dbxref=Genbank:NP_624957.1,GeneID:1096071;Name=NP_624957.1;Note=SCF91.08%2C possible methyltransferase%2C len: 231 aa. Similar in parts to several including: Streptomyces avermitilis TR:BAA84602(EMBL:AB032524) C5-O-methyltransferase (283 aa)%2C fasta scores opt: 243 z-score: 292.9 E(): 6.1e-09 34.5%25 identity in 168 aa overlap and Streptomyces lavendulae TR:AAD28458(EMBL:AF127374) methyltransferase (275 aa)%2C fasta scores opt: 235 z-score: 283.7 E(): 2e-08 32.9%25 identity in 167 aa overlap.;gbkey=CDS;gene=SCF91.08.;product=methyltransferase;protein_id=NP_624957.1;transl_table=11
NC_003888.3	RefSeq	gene	690966	691283	.	+	.	ID=gene635;Dbxref=GeneID:1096072;Name=gvpO2.;gbkey=Gene;gene=gvpO2.;gene_biotype=protein_coding;gene_synonym=gvpO2.;locus_tag=SCO0649
NC_003888.3	RefSeq	CDS	690966	691283	.	+	0	ID=cds617;Parent=gene635;Dbxref=Genbank:NP_624958.1,GeneID:1096072;Name=NP_624958.1;Note=SCF91.09%2C gvpO2%2C possible gas vesicle synthesis protein%2C len: 105 aa. Similar in parts to several other gas vesicle synthesis proteins including: Halobacterium salinarium SW:GVO2_HALSA (EMBL:X64730) gas vesicle synthesis protein protein%2C chromosomal (111 aa)%2C fasta scores opt: 205 z-score: 272.6 E(): 8.2e-08 39.0%25 identity in 77 aa overlap and Streptomyces coelicolor TR:Q9ZC14 (EMBL:AL033505) gas vesicle synthesis protein GvpO (130 aa)%2C fasta scores opt: 223 z-score: 294.0 E(): 5.3e-09 48.7%25 identity in 76 aa overlap.;gbkey=CDS;gene=gvpO2.;product=gas vesicle synthesis protein;protein_id=NP_624958.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	691308	691312	.	+	.	ID=id713;gbkey=RBS
NC_003888.3	RefSeq	gene	691320	691832	.	+	.	ID=gene636;Dbxref=GeneID:1096073;Name=gvpA2;gbkey=Gene;gene=gvpA2;gene_biotype=protein_coding;gene_synonym=gvpA2;locus_tag=SCO0650
NC_003888.3	RefSeq	CDS	691320	691832	.	+	0	ID=cds618;Parent=gene636;Dbxref=Genbank:NP_624959.1,GeneID:1096073;Name=NP_624959.1;Note=similar to the gas vesicle synthesis protein GvpA in other bacteria but contains an extended C-terminal tail%3B function in the Streptomyces group is unknown but they contain several homologs of other gas vesicle synthesis proteins;gbkey=CDS;gene=gvpA2;product=gas vesicle synthesis-like protein;protein_id=NP_624959.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	691365	691481	.	+	.	ID=id714;Dbxref=GeneID:1096073;Note=Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein%2C score 45.90%2C E-value 8.9e-10;gbkey=misc_feature;gene=gvpA2
NC_003888.3	RefSeq	sequence_feature	691368	691412	.	+	.	ID=id715;Dbxref=GeneID:1096073;Note=PS00234 Gas vesicles protein GVPa signature 1;gbkey=misc_feature;gene=gvpA2
NC_003888.3	RefSeq	ribosome_entry_site	691819	691824	.	+	.	ID=id716;Dbxref=GeneID:1096073;gbkey=RBS;gene=gvpA2
NC_003888.3	RefSeq	gene	691829	692614	.	+	.	ID=gene637;Dbxref=GeneID:1096074;Name=gvpF2;gbkey=Gene;gene=gvpF2;gene_biotype=protein_coding;gene_synonym=gvpF2;locus_tag=SCO0651
NC_003888.3	RefSeq	CDS	691829	692614	.	+	0	ID=cds619;Parent=gene637;Dbxref=Genbank:NP_624960.1,GeneID:1096074;Name=NP_624960.1;Note=SCF91.11%2C gvpF2%2C possible gas vesicle synthesis protein%2C len: 261 aa. Highly similar to many other gas vesicle synthesis proteins including: Bacillus megaterium TR:O68674(EMBL:AF053765) gas vesicle protein GvpF (255 aa)%2C fasta scores opt: 181 z-score: 209.5 E(): 0.00027 24.2%25 identity in 211 aa overlap and Streptomyces coelicolor TR:Q9ZC12 (EMBL:AL033505) gas vesicle synthesis protein GvpF (257 aa)%2C fasta scores opt: 459 z-score: 515.7 E(): 2.4e-21 38.9%25 identity in 244 aa overlap.;gbkey=CDS;gene=gvpF2;product=gas vesicle synthesis protein;protein_id=NP_624960.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	692610	692614	.	+	.	ID=id717;Dbxref=GeneID:1096074;gbkey=RBS;gene=gvpF2
NC_003888.3	RefSeq	gene	692619	692897	.	+	.	ID=gene638;Dbxref=GeneID:1096075;Name=gvpG2;gbkey=Gene;gene=gvpG2;gene_biotype=protein_coding;gene_synonym=gvpG2;locus_tag=SCO0652
NC_003888.3	RefSeq	CDS	692619	692897	.	+	0	ID=cds620;Parent=gene638;Dbxref=Genbank:NP_624961.1,GeneID:1096075;Name=NP_624961.1;Note=SCF91.12%2C gvpG2%2C possible gas vesicle synthesis protein%2C len: 92 aa. Similar to Bacillus megaterium TR:O68673(EMBL:AF053765) gas vesicle protein GvpG (88 aa)%2C fasta scores opt: 108 z-score: 155.4 E(): 0.28 31.7%25 identity in 63 aa overlap and Streptomyces coelicolor TR:Q9ZC11 (EMBL:AL033505) gas vesical synthesis protein GvpG (87 aa)%2C fasta scores opt: 216 z-score: 290.9 E(): 7.9e-09 43.7%25 identity in 87 aa overlap. Contains a probable coiled-coil from 40 to 67 (28 residues).;gbkey=CDS;gene=gvpG2;product=gas vesicle synthesis protein;protein_id=NP_624961.1;transl_table=11
NC_003888.3	RefSeq	gene	692894	693445	.	+	.	ID=gene639;Dbxref=GeneID:1096076;Name=SCF91.13;gbkey=Gene;gene=SCF91.13;gene_biotype=protein_coding;gene_synonym=SCF91.13;locus_tag=SCO0653
NC_003888.3	RefSeq	CDS	692894	693445	.	+	0	ID=cds621;Parent=gene639;Dbxref=Genbank:NP_624962.1,GeneID:1096076;Name=NP_624962.1;Note=SCF91.13%2C unknown%2C len: 183 aa. Similar to two proteins of unknown function from Streptomyces coelicolor TR:CAB44390(EMBL:AL078610) SCH35.37C (199 aa)%2C fasta scores opt: 378 z-score: 365.6 E(): 5.5e-13 38.3%25 identity in 196 aa overlap and TR: Q9ZC10(EMBL:AL033505) SC1E6.12 (239 aa)%2C fasta scores opt: 327 z-score: 317.7 E(): 2.6e-10 35.1%25 identity in 228 aa overlap.;gbkey=CDS;gene=SCF91.13;product=hypothetical protein;protein_id=NP_624962.1;transl_table=11
NC_003888.3	RefSeq	gene	693442	694416	.	+	.	ID=gene640;Dbxref=GeneID:1096077;Name=SCF91.14;gbkey=Gene;gene=SCF91.14;gene_biotype=protein_coding;gene_synonym=SCF91.14;locus_tag=SCO0654
NC_003888.3	RefSeq	CDS	693442	694416	.	+	0	ID=cds622;Parent=gene640;Dbxref=Genbank:NP_624963.1,GeneID:1096077;Name=NP_624963.1;Note=SCF91.14%2C unknown%2C len: 324 aa. Highly similar to several proteins of undefined function from Streptomyces coelicolor including TR:CAB44391 (EMBL:AL078610) SCH35.36C (320 aa)%2C fasta scores opt: 1125 z-score: 985.2 E(): 0 57.4%25 identity in 305 aa overlap and TR:Q9ZC09 (EMBL:AL033505) SC1E6.13 (3376 aa)%2C fasta scores opt: 934 z-score: 819.6 E():0 50.4%25 identity in 337 aa overlap. Contains a probable coiled-coil from residue 249 to 287 (39 residues);gbkey=CDS;gene=SCF91.14;product=hypothetical protein;protein_id=NP_624963.1;transl_table=11
NC_003888.3	RefSeq	gene	694441	694785	.	+	.	ID=gene641;Dbxref=GeneID:1096078;Name=gvpJ2;gbkey=Gene;gene=gvpJ2;gene_biotype=protein_coding;gene_synonym=gvpJ2;locus_tag=SCO0655
NC_003888.3	RefSeq	CDS	694441	694785	.	+	0	ID=cds623;Parent=gene641;Dbxref=Genbank:NP_624964.1,GeneID:1096078;Name=NP_624964.1;Note=SCF91.15%2C gvpJ2%2C possible gas vesicle synthesis protein%2C len: 114 aa. Highly similar to many other gas vesicle synthesis proteins including: Bacillus megaterium TR:O6869(EMBL:AF053765) gas vesicle protein GvpJ (100 aa)%2C fasta scores opt: 337 z-score: 453.5 E(): 7e-18 58.8%25 identity in 85 aa overlap and Streptomyces coelicolor TR:Q9ZC08 (EMBL:AL033505) gas vesicle synthesis protein GvpJ (109 aa)%2C fasta scores opt: 423 z-score: 564.4 E(): 4.6e-24 69.8%25 identity in 96 aa overlap. Contains a Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein and a Prosite hit to PS00234 Gas vesicles protein GVPa signature 1. Also contains a probable coiled-coil from 78 to 114 (37 residues).;gbkey=CDS;gene=gvpJ2;product=gas vesicle synthesis protein;protein_id=NP_624964.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	694504	694620	.	+	.	ID=id718;Dbxref=GeneID:1096078;Note=Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein%2C score 61.40%2C E-value 2e-14;gbkey=misc_feature;gene=gvpJ2
NC_003888.3	RefSeq	sequence_feature	694507	694551	.	+	.	ID=id719;Dbxref=GeneID:1096078;Note=PS00234 Gas vesicles protein GVPa signature 1;gbkey=misc_feature;gene=gvpJ2
NC_003888.3	RefSeq	gene	694782	695624	.	+	.	ID=gene642;Dbxref=GeneID:1096079;Name=gvpL2;gbkey=Gene;gene=gvpL2;gene_biotype=protein_coding;gene_synonym=gvpL2,SCF91.16;locus_tag=SCO0656
NC_003888.3	RefSeq	CDS	694782	695624	.	+	0	ID=cds624;Parent=gene642;Dbxref=Genbank:NP_624965.1,GeneID:1096079;Name=NP_624965.1;Note=SCF91.16%2C gvpL2%2C possible gas vesicle synthesis protein%2C len: 280 aa. Weakly similar to Bacillus megaterium TR:O6872 (EMBL:AF053765) gas vesicle protein GvpL (269 aa)%2C fasta scores opt: 172 z-score: 189.1 E(): 0.0037 19.8%25 identity in 222 aa overlap. Also similar to Streptomyces coelicolor TR:Q9ZC07 (EMBL:AL033505) gas vesicle synthesis protein GvpL (259 aa)%2C fasta scores opt: 436 z-score: 462.0 E(): 2.3e-18 37.0%25 identity in 254 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=gvpL2;product=gas vesicle synthesis protein;protein_id=NP_624965.1;transl_table=11
NC_003888.3	RefSeq	gene	695660	695869	.	+	.	ID=gene643;Dbxref=GeneID:1096080;Name=gvpS2;gbkey=Gene;gene=gvpS2;gene_biotype=protein_coding;gene_synonym=gvpS2;locus_tag=SCO0657
NC_003888.3	RefSeq	CDS	695660	695869	.	+	0	ID=cds625;Parent=gene643;Dbxref=Genbank:NP_624966.1,GeneID:1096080;Name=NP_624966.1;Note=SCF91.17%2C gvpS2%2C possible gas vesicle synthesis protein%2C len: 69 aa. Highly similar to Bacillus megaterium TR:O6869(EMBL:AF053765) gas vesicle protein GvpS (95 aa)%2C fasta scores opt: 143 z-score: 203.5 E(): 0.00059 39.3%25 identity in 56 aa overlap and Streptomyces coelicolor TR:Q9ZC06 (EMBL:AL033505) gas vesicle synthesis protein GvpS (60 aa)%2C fasta scores opt: 214 z-score: 298.0 E(): 3.2e-09 63.5%25 identity in 52 aa overlap. Contains a possible membrane spanning hydrophobic domain and a Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein.;gbkey=CDS;gene=gvpS2;product=gas vesicle synthesis protein;protein_id=NP_624966.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	695702	695818	.	+	.	ID=id720;Dbxref=GeneID:1096080;Note=Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein%2C score 35.70%2C E-value 1e-06;gbkey=misc_feature;gene=gvpS2
NC_003888.3	RefSeq	gene	695866	696168	.	+	.	ID=gene644;Dbxref=GeneID:1096081;Name=gvpK2;gbkey=Gene;gene=gvpK2;gene_biotype=protein_coding;gene_synonym=gvpK2;locus_tag=SCO0658
NC_003888.3	RefSeq	CDS	695866	696168	.	+	0	ID=cds626;Parent=gene644;Dbxref=Genbank:NP_624967.1,GeneID:1096081;Name=NP_624967.1;Note=SCF91.18%2C gvpK2%2C possible gas vesicle synthesis protein%2C len: 100 aa. Highly similar to many other gas vesicle synthesis proteins including: Halobacterium salinarium SW:GVK2_HALSA(EMBL:X64730) gas vesicle synthesis protein GvpK (119 aa)%2C fasta scores opt: 163 z-score: 224.6 E(): 3.9e-05 43.3%25 identity in 67 aa overlap and Bacillus megaterium TR:O68670(EMBL:AF053765) gas vesicle protein GvpK (94 aa)%2C fasta scores opt: 302 z-score: 402.9 E(): 4.6e-15 53.3%25 identity in 92 aa overlap. Also highly similar to Streptomyces coelicolor TR:Q9ZC05 (EMBL:AL033505) gas vesicle synthesis protein GvpK (98 aa)%2C fasta scores opt: 370 z-score: 489.0 E(): 7.3e-20 66.3%25 identity in 92 aa overlap.;gbkey=CDS;gene=gvpK2;product=gas vesicle synthesis protein;protein_id=NP_624967.1;transl_table=11
NC_003888.3	RefSeq	gene	696248	697354	.	+	.	ID=gene645;Dbxref=GeneID:1096082;Name=SCF91.19;gbkey=Gene;gene=SCF91.19;gene_biotype=protein_coding;gene_synonym=SCF91.19;locus_tag=SCO0659
NC_003888.3	RefSeq	CDS	696248	697354	.	+	0	ID=cds627;Parent=gene645;Dbxref=Genbank:NP_624968.1,GeneID:1096082;Name=NP_624968.1;Note=SCF91.19%2C possible DeoR-family transcriptional regulator%2C len: 368 aa. Similar to many DNA-binding regulatory proteins including: Streptomyces reticuli TR:CAB46346(EMBL:AJ009798) regulator CebR (350 aa)%2C fasta scores opt: 287 z-score: 337.9 E(): 1.9e-11 30.6%25 identity in 359 aa overlap and Streptomyces lividans SW:REGL_STRLI (EMBL:X98242) transcription regulatory protein RegL (345 aa)%2C fasta scores opt: 276 z-score: 325.3 E(): 9.6e-11 28.9%25 identity in 353 aa overlap. Contains Pfam matches to entries PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family and Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family. In addition to a Prosite hit to PS00894 Bacterial regulatory proteins%2C deoR family signature with the helix-turn-helix motif situated between residues 23..44 (+3.43 SD). Also contains a probable coiled-coil from 21 to 48 (28 residues).;gbkey=CDS;gene=SCF91.19;product=DeoR family transcriptional regulator;protein_id=NP_624968.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	696269	696415	.	+	.	ID=id721;Dbxref=GeneID:1096082;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 40.70%2C E-value 2.2e-10;gbkey=misc_feature;gene=SCF91.19
NC_003888.3	RefSeq	sequence_feature	696269	696373	.	+	.	ID=id722;Dbxref=GeneID:1096082;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature;gbkey=misc_feature;gene=SCF91.19
NC_003888.3	RefSeq	sequence_feature	696470	697225	.	+	.	ID=id723;Dbxref=GeneID:1096082;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 0.30%2C E-value 2.5e-05;gbkey=misc_feature;gene=SCF91.19
NC_003888.3	RefSeq	gene	697480	698811	.	+	.	ID=gene646;Dbxref=GeneID:1096083;Name=SCF91.20;gbkey=Gene;gene=SCF91.20;gene_biotype=protein_coding;gene_synonym=SCF91.20;locus_tag=SCO0660
NC_003888.3	RefSeq	CDS	697480	698811	.	+	0	ID=cds628;Parent=gene646;Dbxref=Genbank:NP_624969.1,GeneID:1096083;Name=NP_624969.1;Note=SCF91.20%2C probable solute-binding lipoprotein%2C len: 443 aa. Similar to several solute-binding proteins e.g. Agrobacterium radiobacter SW:LACE_AGRRD(EMBL:X66596) lactose-binding protein precursor (422 aa)%2C fasta scores opt: 270 z-score: 303.1 E(): 1.6e-09 23.5%25 identity in 387 aa overlap and Streptomyces coelicolor TR:P72397(EMBL:Y07706) maltose-binding protein MalE (423 aa)%2C fasta scores opt: 345 z-score: 386.1 E(): 4e-14 25.5%25 identity in 459 aa overlap. Contains a Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein. Also contains an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF91.20;product=solute-binding lipoprotein;protein_id=NP_624969.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	697525	697557	.	+	.	ID=id724;Dbxref=GeneID:1096083;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF91.20
NC_003888.3	RefSeq	sequence_feature	697894	698766	.	+	.	ID=id725;Dbxref=GeneID:1096083;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 53.70%2C E-value 3.9e-12;gbkey=misc_feature;gene=SCF91.20
NC_003888.3	RefSeq	ribosome_entry_site	698825	698830	.	+	.	ID=id726;gbkey=RBS
NC_003888.3	RefSeq	gene	698838	699824	.	+	.	ID=gene647;Dbxref=GeneID:1096084;Name=SCF91.21;gbkey=Gene;gene=SCF91.21;gene_biotype=protein_coding;gene_synonym=SCF91.21;locus_tag=SCO0661
NC_003888.3	RefSeq	CDS	698838	699824	.	+	0	ID=cds629;Parent=gene647;Dbxref=Genbank:NP_624970.1,GeneID:1096084;Name=NP_624970.1;Note=SCF91.21%2C possible binding protein dependent transport protein%2C len: 328 aa. Similar to many membrane transport proteins e.g. Escherichia coli SW:UGPA_ECOLI(EMBL:X13141) SN-glycerol-3-phosphate transport system permease (295 aa)%2C fasta scores opt: 393 z-score: 465.7 E(): 1.5e-18 28.7%25 identity in 282 aa overlap and Streptomyces coelicolor TR:CAB41203(EMBL:AL049661) binding protein dependent transport protein (327 aa)%2C fasta scores opt: 452 z-score: 533.8 E(): 2.4e-22 28.2%25 identity in 326 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF91.21;product=binding protein dependent transport protein;protein_id=NP_624970.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	699468	699704	.	+	.	ID=id727;Dbxref=GeneID:1096084;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 35.60%2C E-value 1.1e-06;gbkey=misc_feature;gene=SCF91.21
NC_003888.3	RefSeq	ribosome_entry_site	699811	699816	.	+	.	ID=id728;Dbxref=GeneID:1096084;gbkey=RBS;gene=SCF91.21
NC_003888.3	RefSeq	gene	699821	700684	.	+	.	ID=gene648;Dbxref=GeneID:1096085;Name=SCF91.22;gbkey=Gene;gene=SCF91.22;gene_biotype=protein_coding;gene_synonym=SCF91.22;locus_tag=SCO0662
NC_003888.3	RefSeq	CDS	699821	700684	.	+	0	ID=cds630;Parent=gene648;Dbxref=Genbank:NP_624971.1,GeneID:1096085;Name=NP_624971.1;Note=SCF91.22%2C possible binding protein dependent transport protein%2C len: 287 aa. Similar to many membrane transport proteins e.g. Agrobacterium radiobacter SW:LACG_AGRRD(EMBL:X66596) lactose transport system permease (273 aa)%2C fasta scores opt: 439 z-score: 546.1 E(): 4.8e-23 28.5%25 identity in 267 aa overlap and Bacillus subtilis TR:O05095(EMBL:X89810) integral protein (281 aa)%2C fasta scores opt: 480 z-score: 596.3 E(): 7.7e-26 30.8%25 identity in 266 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF91.22;product=binding protein dependent transport protein;protein_id=NP_624971.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	700325	700555	.	+	.	ID=id729;Dbxref=GeneID:1096085;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 47.60%2C E-value 2.7e-10;gbkey=misc_feature;gene=SCF91.22
NC_003888.3	RefSeq	ribosome_entry_site	700670	700673	.	+	.	ID=id730;Dbxref=GeneID:1096085;gbkey=RBS;gene=SCF91.22
NC_003888.3	RefSeq	gene	700681	701712	.	+	.	ID=gene649;Dbxref=GeneID:1096086;Name=SCF91.23;gbkey=Gene;gene=SCF91.23;gene_biotype=protein_coding;gene_synonym=SCF91.23;locus_tag=SCO0663
NC_003888.3	RefSeq	CDS	700681	701712	.	+	0	ID=cds631;Parent=gene649;Dbxref=Genbank:NP_624972.1,GeneID:1096086;Name=NP_624972.1;Note=SCF91.23%2C possible 2-hydroxyacid-family dehydrogenase%2C len: 343 aa. Similar in parts to several D-3-phosphoglycerate dehydrogenases e.g. Mycobacterium tuberculosis SW:SERA_MYCTU (EMBL:AL021287) (528 aa)%2C fasta scores opt: 450 z-score: 536.4 E(): 1.7e-22 34.1%25 identity in 261 aa overlap. Also similar to Streptomyces coelicolor TR:CAB55710(EMBL:AL117387) possible dehydrogenase SCF41.07 (339 aa)%2C fasta scores opt: 927 z-score: 1106.0 E(): 0 48.6%25 identity in 325 aa overlap. Contains a Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases and a Prosite hit to PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;gbkey=CDS;gene=SCF91.23;product=2-hydroxyacid dehydrogenase;protein_id=NP_624972.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	700975	701583	.	+	.	ID=id731;Dbxref=GeneID:1096086;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 121.40%2C E-value 2.2e-49;gbkey=misc_feature;gene=SCF91.23
NC_003888.3	RefSeq	sequence_feature	701407	701457	.	+	.	ID=id732;Dbxref=GeneID:1096086;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3;gbkey=misc_feature;gene=SCF91.23
NC_003888.3	RefSeq	gene	701709	703604	.	+	.	ID=gene650;Dbxref=GeneID:1096087;Name=SCF91.24;gbkey=Gene;gene=SCF91.24;gene_biotype=protein_coding;gene_synonym=SCF91.24;locus_tag=SCO0664
NC_003888.3	RefSeq	CDS	701709	703604	.	+	0	ID=cds632;Parent=gene650;Dbxref=Genbank:NP_624973.1,GeneID:1096087;Name=NP_624973.1;Note=SCF91.24%2C hypothetical protein%2C len: 631 aa%3B similar to TR:CAC48915 (EMBL:AL603643) Rhizobium meliloti (Sinorhizobium meliloti) hypothetical protein SMB20536%2C 617 aa%3B fasta scores: opt: 524 Z-score: 553.7 E(): 3.3e-23%3B 30.182%25 identity in 550 aa overlap;gbkey=CDS;gene=SCF91.24;product=hypothetical protein;protein_id=NP_624973.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	703261	706786	.	+	.	ID=id733;Note=region of previously sequenced DNA which is 99%25 identical (over 3526 bps) to EMBL:AF000419 Streptomyces coelicolor strain ATCC10147 catalase (catB) gene.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	703750	703977	.	+	.	ID=gene651;Dbxref=GeneID:1096088;Name=SCF91.25;gbkey=Gene;gene=SCF91.25;gene_biotype=protein_coding;gene_synonym=SCF91.25;locus_tag=SCO0665
NC_003888.3	RefSeq	CDS	703750	703977	.	+	0	ID=cds633;Parent=gene651;Dbxref=Genbank:NP_624974.1,GeneID:1096088;Name=NP_624974.1;Note=SCF91.25%2C possible hypothetical protein%2C len: 75 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF91.25;product=hypothetical protein;protein_id=NP_624974.1;transl_table=11
NC_003888.3	RefSeq	gene	704114	706393	.	+	.	ID=gene652;Dbxref=GeneID:1096089;Name=catB;gbkey=Gene;gene=catB;gene_biotype=protein_coding;gene_synonym=catB;locus_tag=SCO0666
NC_003888.3	RefSeq	CDS	704114	706393	.	+	0	ID=cds634;Parent=gene652;Dbxref=Genbank:NP_624975.1,GeneID:1096089;Name=NP_624975.1;Note=SCF91.26%2C catB%2C catalase (EC 1.11.1.6)%2C len: 759 aa. Previously sequenced and characterised from Streptomyces coelicolor strain ATCC10147 EMBL:AF000419 fasta scores opt:5163 z-score:0.0 E(): 0.0 100.00%25 identity in 759 aa overlap. Contains two Prosite hits to PS00437 Catalase proximal heme-ligand signature and PS00438 Catalase proximal active site signature. Also contains a Pfam match to entry PF00199 catalase%2C Catalase.;gbkey=CDS;gene=catB;product=catalase;protein_id=NP_624975.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	704363	705808	.	+	.	ID=id734;Dbxref=GeneID:1096089;Note=Pfam match to entry PF00199 catalase%2C Catalase%2C score 777.20%2C E-value 6.7e-230;gbkey=misc_feature;gene=catB
NC_003888.3	RefSeq	sequence_feature	704471	704521	.	+	.	ID=id735;Dbxref=GeneID:1096089;Note=PS00438 Catalase proximal active site signature;gbkey=misc_feature;gene=catB
NC_003888.3	RefSeq	sequence_feature	705353	705379	.	+	.	ID=id736;Dbxref=GeneID:1096089;Note=PS00437 Catalase proximal heme-ligand signature;gbkey=misc_feature;gene=catB
NC_003888.3	RefSeq	gene	706448	707329	.	-	.	ID=gene653;Dbxref=GeneID:1096090;Name=SCF91.27c;gbkey=Gene;gene=SCF91.27c;gene_biotype=protein_coding;gene_synonym=SCF91.27c;locus_tag=SCO0667
NC_003888.3	RefSeq	CDS	706448	707329	.	-	0	ID=cds635;Parent=gene653;Dbxref=Genbank:NP_624976.1,GeneID:1096090;Name=NP_624976.1;Note=SCF91.27c%2C hypothetical protein%2C len: 293 aa. Similar to several proteins of undefined function e.g. Mycobacterium tuberculosis TR:O53526(EMBL:AL021925) hypothetical 32.8 KD protein (309 aa)%2C fasta scores opt: 441 z-score: 476.5 E(): 3.6e-19 32.8%25 identity in 299 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCF91.27c;product=hypothetical protein;protein_id=NP_624976.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	707337	707341	.	-	.	ID=id737;gbkey=RBS
NC_003888.3	RefSeq	gene	707401	708993	.	-	.	ID=gene654;Dbxref=GeneID:1096091;Name=SCF91.28c;gbkey=Gene;gene=SCF91.28c;gene_biotype=protein_coding;gene_synonym=SCF91.28c;locus_tag=SCO0668
NC_003888.3	RefSeq	CDS	707401	708993	.	-	0	ID=cds636;Parent=gene654;Dbxref=Genbank:NP_624977.1,GeneID:1096091;Name=NP_624977.1;Note=SCF91.28c%2C possible flavoprotein%2C len: 530 aa. Highly similar to two hypothetical proteins from Mycobacterium tuberculosis e.g. TR:O53525 (EMBL:AL021925) hypothetical 49.8 KD protein (457 aa)%2C fasta scores opt: 1698 z-score: 1838.9 E():0 57.7%25 identity in 461 aa overlap. Also similar to several eukaryotic alkyldihydroxyacetonephosphate synthases (EC 2.5.1.26) e.g. from Homo sapiens (Human) SW:ADAS_HUMAN (EMBL:Y09443) (658 aa)%2C fasta scores opt: 598 z-score: 648.1 E(): 1e-28 30.4%25 identity in 573 aa overlap. Contains a Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain.;gbkey=CDS;gene=SCF91.28c;product=flavoprotein;protein_id=NP_624977.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	708196	708831	.	-	.	ID=id738;Dbxref=GeneID:1096091;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 219.40%2C E-value 5.3e-62;gbkey=misc_feature;gene=SCF91.28c
NC_003888.3	RefSeq	gene	709071	709688	.	+	.	ID=gene655;Dbxref=GeneID:1096092;Name=SCF91.29;gbkey=Gene;gene=SCF91.29;gene_biotype=protein_coding;gene_synonym=SCF91.29;locus_tag=SCO0669
NC_003888.3	RefSeq	CDS	709071	709688	.	+	0	ID=cds637;Parent=gene655;Dbxref=Genbank:NP_624978.1,GeneID:1096092;Name=NP_624978.1;Note=SCF91.29%2C possible TetR-family transcriptional regulator%2C len: 205 aa. Weakly similar to many other regulators e.g. Streptomyces hygroscopicus TR:Q54288 (EMBL:X86780) regulator of antibiotic transport complexes (204 aa)%2C fasta scores opt: 148 z-score: 192.6 E(): 0.0024 29.6%25 identity in 115 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 37..58 (+5.86 SD).;gbkey=CDS;gene=SCF91.29;product=TetR family transcriptional regulator;protein_id=NP_624978.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	709128	709232	.	+	.	ID=id739;Dbxref=GeneID:1096092;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 23.60%2C E-value 8e-05;gbkey=misc_feature;gene=SCF91.29
NC_003888.3	RefSeq	gene	709685	711268	.	+	.	ID=gene656;Dbxref=GeneID:1096093;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;gene_synonym=glpD,SCF91.30;locus_tag=SCO0670
NC_003888.3	RefSeq	CDS	709685	711268	.	+	0	ID=cds638;Parent=gene656;Dbxref=Genbank:NP_624979.1,GeneID:1096093;Name=NP_624979.1;Note=SCF91.30%2C glpD%2C glycerol-3-phosphate dehydrogenase (EC 1.1.99.5)%2C len: 527 aa. Highly similar to many prokaryotic and eukaryotic glycerol-3-phosphate dehydrogenases including: Mycobacterium tuberculosis SW:GLPD_MYCTU (EMBL:Z70692) (516 aa)%2C fasta scores opt: 1648 z-score: 1727.9 E():0 52.6%25 identity in 513 aa overlap and Caenorhabditis elegans SW:GPDM_CAEEL(EMBL:Z73906) (722aa)%2C fasta score opt: 668 z-score: 700.9 E(): 1.2e-31 33.9%25 identity in 537 aa overlap. Contains a Pfam match to entry PF01224 FAD_Gly3P_dh%2C FAD-dependent glycerol-3-phosphate dehydrogenase and a Prosite hit to PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2.;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=NP_624979.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	709766	711247	.	+	.	ID=id740;Dbxref=GeneID:1096093;Note=Pfam match to entry PF01224 FAD_Gly3P_dh%2C FAD-dependent glycerol-3-phosphate dehydrogenase%2C score 440.90%2C E-value 1.1e-128;gbkey=misc_feature;gene=glpD
NC_003888.3	RefSeq	sequence_feature	710852	710884	.	+	.	ID=id741;Dbxref=GeneID:1096093;Note=PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2;gbkey=misc_feature;gene=glpD
NC_003888.3	RefSeq	gene	711379	711633	.	-	.	ID=gene657;Dbxref=GeneID:1096094;Name=SCF91.31c;gbkey=Gene;gene=SCF91.31c;gene_biotype=protein_coding;gene_synonym=SCF91.31c;locus_tag=SCO0671
NC_003888.3	RefSeq	CDS	711379	711633	.	-	0	ID=cds639;Parent=gene657;Dbxref=Genbank:NP_624980.1,GeneID:1096094;Name=NP_624980.1;Note=SCF91.31c%2C unknown%2C len: 84 aa.;gbkey=CDS;gene=SCF91.31c;product=hypothetical protein;protein_id=NP_624980.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	711637	711641	.	-	.	ID=id742;gbkey=RBS
NC_003888.3	RefSeq	gene	711649	712200	.	+	.	ID=gene658;Dbxref=GeneID:1096095;Name=SCF91.32;gbkey=Gene;gene=SCF91.32;gene_biotype=protein_coding;gene_synonym=SCF91.32;locus_tag=SCO0672
NC_003888.3	RefSeq	CDS	711649	712200	.	+	0	ID=cds640;Parent=gene658;Dbxref=Genbank:NP_624981.1,GeneID:1096095;Name=NP_624981.1;Note=SCF91.32%2C possible anti-sigma factor antagonist%2C len: 183 aa. Similar in parts to many anti-sigma factor antagonists including: Streptomyces coelicolor TR:CAB44395 (EMBL:AL078610) SCH35.32C (113 aa)%2C fasta scores opt: 199 z-score: 246.4 E(): 2.4e-06 33.9%25 identity in 112 aa overlap. Contains a Pfam match to entry PF01740 SpoIIAA.;gbkey=CDS;gene=SCF91.32;product=anti-sigma factor antagonist;protein_id=NP_624981.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	711871	712188	.	+	.	ID=id743;Dbxref=GeneID:1096095;Note=Pfam match to entry PF01740 SpoIIAA%2C %2C score 59.70%2C E-value 6.2e-14;gbkey=misc_feature;gene=SCF91.32
NC_003888.3	RefSeq	gene	712209	712736	.	-	.	ID=gene659;Dbxref=GeneID:1096096;Name=SCF91.33c;gbkey=Gene;gene=SCF91.33c;gene_biotype=protein_coding;gene_synonym=SCF91.33c;locus_tag=SCO0673
NC_003888.3	RefSeq	CDS	712209	712736	.	-	0	ID=cds641;Parent=gene659;Dbxref=Genbank:NP_624982.1,GeneID:1096096;Name=NP_624982.1;Note=SCF91.33c%2C unknown%2C len: 175 aa. Weakly similar to several regulatory proteins including: Streptomyces coelicolor TR:CAB42940(EMBL:AL049863) SC5H1.15C (151 aa)%2C fasta scores opt: 235 z-score: 290.0 E(): 8.9e-09 39.3%25 identity in 122 aa overlap.;gbkey=CDS;gene=SCF91.33c;product=hypothetical protein;protein_id=NP_624982.1;transl_table=11
NC_003888.3	RefSeq	gene	712829	714181	.	-	.	ID=gene660;Dbxref=GeneID:1096097;Name=xysA;gbkey=Gene;gene=xysA;gene_biotype=protein_coding;gene_synonym=xysA;locus_tag=SCO0674
NC_003888.3	RefSeq	CDS	712829	714181	.	-	0	ID=cds642;Parent=gene660;Dbxref=Genbank:NP_624983.1,GeneID:1096097;Name=NP_624983.1;Note=SCF91.34c%2C xysA%2C  endo-1%2C4-beta-xylanase (EC 3.2.1.8)%2C len: 450 aa. Highly similar to many including: Streptomyces lividans SW:XYNA_STRLI(EMBL:M64551) endo-1%2C4-beta-xylanase A precursor (EC 3.2.1.8) (477 aa)%2Cfasta scores opt: 1313 z-score: 1280.4 E(): 0 49.0%25 identity in 459 aa overlap and Streptomyces halstedii TR:Q59922(EMBL:U41627) endo-1%2C4-beta-xylanase (EC 3.2.1.8) (461 aa)%2C fasta scores opt: 2301 z-score: 2238.0 E():0 76.9%25 identity in 438 aa overlap. Contains Pfam matches to entries PF00553 CBD_2%2C Cellulose binding domain and Pfam match to entry PF00331 Glyco_hydro_10%2C Glycosyl hydrolase family 10. Also contains a Prosite hit to PS00591 Glycosyl hydrolases family 10 active site and a possible N-terminal signal sequence.;gbkey=CDS;gene=xysA;product=endo-1%2C4-beta-xylanase;protein_id=NP_624983.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	712841	713122	.	-	.	ID=id744;Dbxref=GeneID:1096097;Note=Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain%2C score 71.40%2C E-value 1.9e-19;gbkey=misc_feature;gene=xysA
NC_003888.3	RefSeq	sequence_feature	713375	713962	.	-	.	ID=id745;Dbxref=GeneID:1096097;Note=Pfam match to entry PF00331 Glyco_hydro_10%2C Glycosyl hydrolase family 10%2C score 368.40%2C E-value 7.5e-107;gbkey=misc_feature;gene=xysA
NC_003888.3	RefSeq	sequence_feature	713375	713407	.	-	.	ID=id746;Dbxref=GeneID:1096097;Note=PS00591 Glycosyl hydrolases family 10 active site;gbkey=misc_feature;gene=xysA
NC_003888.3	RefSeq	ribosome_entry_site	714192	714196	.	-	.	ID=id747;gbkey=RBS
NC_003888.3	RefSeq	gene	714374	717028	.	+	.	ID=gene661;Dbxref=GeneID:1096098;Name=SCF91.35;gbkey=Gene;gene=SCF91.35;gene_biotype=protein_coding;gene_synonym=SCF91.35;locus_tag=SCO0675
NC_003888.3	RefSeq	CDS	714374	717028	.	+	0	ID=cds643;Parent=gene661;Dbxref=Genbank:NP_624984.1,GeneID:1096098;Name=NP_624984.1;Note=SCF91.35%2C unknown%2C len: 884 aa. Similar to several Streptomyces coelicolor proteins e.g. TR:O86807 (EMBL:AL031031)  regulatory protein SC7C7.02C (916 aa)%2C fasta scores opt: 351 z-score: 351.3 E(): 3.4e-12 26.9%25 identity in 815 aa overlap and TR:Q9ZBJ0 (EMBL:AL035161) conserved hypothetical protein SC9C7.20 (860 aa)%2C fasta scores opt: 579 z-score: 580.5 E(): 5.8e-25 30.5%25 identity in 731 aa overlap. Also similar in the C-terminus to several other regulatory proteins e.g. Synechocystis sp. (strain PCC 6803) TR:P73256 (EMBL:D90905) sigma factor SibG regulation protein RsbU (452 aa)%2C fasta scores opt: 240 z-score: 244.4 E(): 3.1e-06 26.7%25 identity in 363 aa overlap. Contains a Pfam match to entry PF01590 GAF%2C GAF domain.;gbkey=CDS;gene=SCF91.35;product=hypothetical protein;protein_id=NP_624984.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	715844	716269	.	+	.	ID=id748;Dbxref=GeneID:1096098;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 26.30%2C E-value 0.00071;gbkey=misc_feature;gene=SCF91.35
NC_003888.3	RefSeq	gene	717303	719897	.	+	.	ID=gene662;Dbxref=GeneID:1096099;Name=SCF91.36;gbkey=Gene;gene=SCF91.36;gene_biotype=protein_coding;gene_synonym=SCF91.36;locus_tag=SCO0676
NC_003888.3	RefSeq	CDS	717303	719897	.	+	0	ID=cds644;Parent=gene662;Dbxref=Genbank:NP_624985.1,GeneID:1096099;Name=NP_624985.1;Note=SCF91.36%2C possible integral membrane sensor protein%2C len: 864 aa. Similar in the N-terminus to several sensory transduction histidine kinases e.g. Escherichia coli SW:DCUS_ECOLI(EMBL:U14003) sensor protein DcuS (EC 2.7.3.-) (543 aa)%2C fasta scores opt: 499 z-score: 546.9 E(): 4.4e-23 30.8%25 identity in 331 aa overlap. Highly similar in the C-terminus to several proteins from Streptomyces coelicolor including: TR:CAB41270(EMBL:AL049707) conserved hypothetical protein (fragment) ( >436 aa)%2C fasta scores opt: 1207 z-score: 1324.9 E():0 48.0%25 identity in 423 aa overlap and TR:CAB44394(EMBL:AL078610) regulatory protein SCH35.33C (422 aa)%2C fasta scores opt: 309 z-score: 340.2 E(): 1.4e-11 32.0%25 identity in 284 aa overlap. Contains a Pfam match to entry PF01590 GAF%2C GAF domain. Also contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF91.36;product=integral membrane sensor protein;protein_id=NP_624985.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	718293	718784	.	+	.	ID=id749;Dbxref=GeneID:1096099;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 32.20%2C E-value 1.2e-05;gbkey=misc_feature;gene=SCF91.36
NC_003888.3	RefSeq	gene	720032	720874	.	+	.	ID=gene663;Dbxref=GeneID:1096100;Name=csn;gbkey=Gene;gene=csn;gene_biotype=protein_coding;gene_synonym=csn;locus_tag=SCO0677
NC_003888.3	RefSeq	CDS	720032	720874	.	+	0	ID=cds645;Parent=gene663;Dbxref=Genbank:NP_624986.1,GeneID:1096100;Name=NP_624986.1;Note=SCF91.37%2C csn%2C  chitosanase (EC 3.2.1.132)%2C len: 280 aa. Highly similar to several including: Streptomyces sp. (strain N174) SW:CHIS_STRSQ (EMBL:L07779) chitosanase precursor (EC 3.2.1.132) (278 aa)%2C fasta scores opt: 1122 z-score: 1263.9 E():0 64.3%25 identity in 272 aa overlap and Streptomyces coelicolor TR:CAB52859 (EMBL:AL109849) chitosanase (305 aa)%2C fasta scores opt: 954 z-score: 1075.3 E():0 63.7%25 identity in 234 aa overlap. Contains a Pfam match to entry PF01374 Glyco_hydro_46%2C Glycosyl hydrolase family 46 and a possible N-terminal signal sequence.;gbkey=CDS;gene=csn;product=chitosanase;protein_id=NP_624986.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	720203	720838	.	+	.	ID=id750;Dbxref=GeneID:1096100;Note=Pfam match to entry PF01374 Glyco_hydro_46%2C Glycosyl hydrolase family 46%2C score 304.90%2C E-value 9.6e-88;gbkey=misc_feature;gene=csn
NC_003888.3	RefSeq	stem_loop	720911	720968	.	+	.	ID=id751;Note=possible stem loop with 24/29 ( 82%25) matches and no unpaired region.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	720985	721158	.	-	.	ID=gene664;Dbxref=GeneID:1096101;Name=SCF91.38c;gbkey=Gene;gene=SCF91.38c;gene_biotype=protein_coding;gene_synonym=SCF91.38c;locus_tag=SCO0678
NC_003888.3	RefSeq	CDS	720985	721158	.	-	0	ID=cds646;Parent=gene664;Dbxref=Genbank:NP_624987.1,GeneID:1096101;Name=NP_624987.1;Note=SCF91.38c%2C unknown%2C len: 57 aa. Similar to Bacillus subtilis TR:P70964(EMBL:Z81356) hypothetical 6.8 KD protein (62 aa)%2C fasta scores opt: 104 z-score: 152.5 E(): 0.4 33.3%25 identity in 57 aa overlap.;gbkey=CDS;gene=SCF91.38c;product=hypothetical protein;protein_id=NP_624987.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	721161	721171	.	-	.	ID=id752;gbkey=RBS
NC_003888.3	RefSeq	gene	721248	721463	.	+	.	ID=gene665;Dbxref=GeneID:1096102;Name=SCF91.39;gbkey=Gene;gene=SCF91.39;gene_biotype=protein_coding;gene_synonym=SCF91.39;locus_tag=SCO0679
NC_003888.3	RefSeq	CDS	721248	721463	.	+	0	ID=cds647;Parent=gene665;Dbxref=Genbank:NP_624988.1,GeneID:1096102;Name=NP_624988.1;Note=SCF91.39%2C unknown%2C len: 71 aa.;gbkey=CDS;gene=SCF91.39;product=hypothetical protein;protein_id=NP_624988.1;transl_table=11
NC_003888.3	RefSeq	gene	721495	723039	.	-	.	ID=gene666;Dbxref=GeneID:1096103;Name=SCF15.01c;gbkey=Gene;gene=SCF15.01c;gene_biotype=protein_coding;gene_synonym=SCF15.01c,SCF91.40c;locus_tag=SCO0680
NC_003888.3	RefSeq	CDS	721495	723039	.	-	0	ID=cds648;Parent=gene666;Dbxref=Genbank:NP_733510.1,GeneID:1096103;Name=NP_733510.1;Note=SCF15.01c%2C possible transmembrane efflux protein%2C partial CDS%2C len: > 443 aa. Highly similar to many members of the drug resistance translocase family including: Streptomyces lipmanii (Streptomyces alboniger) SW:PUR8_STRLP(EMBL:X76855) puromycin resistance protein Pur8 (503 aa)%2C fasta scores opt: 902 z-score: 986.1 E():0 42.6%25 identity in 420 aa overlap and Streptomyces coelicolor SW:AC22_STRCO(EMBL:M64683) probable actinorhodin transporter ActII-2 (578 aa)%2C fasta scores opt: 867 z-score: 947.3 E():0 39.6%25 identity in 417 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and multiple possible membrane spanning hydrophobic domains.~SCF91.40c%2C possible transmembrane efflux protein%2C partial CDS%2C len: > 105 aa. Similar to Streptomyces coelicolor TR:CAB42035(EMBL:AL049754) transmembrane efflux protein SCH10.26C (484 aa)%2C fasta scores pt: 111 z-score: 141.1 E():1.7 31.4%25 identity in 105 aa overlap. Contains a possible membrane spanning hydrophobic domain. Overlaps and extends into CDS SCF15.01c on the adjoining cosmid.;gbkey=CDS;gene=SCF15.01c;product=transmembrane efflux protein;protein_id=NP_733510.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	721861	722922	.	-	.	ID=id753;Dbxref=GeneID:1096103;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -97.80%2C E-value 0.0022;gbkey=misc_feature;gene=SCF15.01c
NC_003888.3	RefSeq	gene	723181	724545	.	+	.	ID=gene667;Dbxref=GeneID:1096104;Name=SCF15.02;gbkey=Gene;gene=SCF15.02;gene_biotype=protein_coding;gene_synonym=SCF15.02;locus_tag=SCO0681
NC_003888.3	RefSeq	CDS	723181	724545	.	+	0	ID=cds649;Parent=gene667;Dbxref=Genbank:NP_624989.1,GeneID:1096104;Name=NP_624989.1;Note=SCF15.02%2C possible ferredoxin/ferredoxin-NADP reductase (hypothetical protein)%2C len: 454 aa. Similar to several eukaryotic and prokaryotic ferredoxin-NADP(+) reductases e.g. Rattus norvegicus (Rat) SW:ADRO_RAT (EMBL:D63761) NADPH:adrenodoxin oxidoreductase precursor (EC 1.18.1.2) (494 aa)%2C fasta scores opt: 780 z-score: 902.2 E(): 0 36.3%25 identity in 463 aa overlap and Mycobacterium leprae TR:O32886 (EMBL:Z98271) possible ferredoxin (456 aa)%2C fasta scores opt: 1030 z-score: 1191.5 E():0 39.2%25 identity in 454 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCF15.02;product=ferredoxin/ferredoxin-NADP reductase;protein_id=NP_624989.1;transl_table=11
NC_003888.3	RefSeq	gene	724639	725013	.	-	.	ID=gene668;Dbxref=GeneID:1096105;Name=SCF15.03c;gbkey=Gene;gene=SCF15.03c;gene_biotype=protein_coding;gene_synonym=SCF15.03c;locus_tag=SCO0682
NC_003888.3	RefSeq	CDS	724639	725013	.	-	0	ID=cds650;Parent=gene668;Dbxref=Genbank:NP_624990.1,GeneID:1096105;Name=NP_624990.1;Note=SCF15.03c%2C unknown%2C len: 124 aa. Contains a probable coiled-coil between residues 96..124 (29 residues).;gbkey=CDS;gene=SCF15.03c;product=hypothetical protein;protein_id=NP_624990.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	725021	725027	.	-	.	ID=id754;gbkey=RBS
NC_003888.3	RefSeq	gene	725056	725580	.	-	.	ID=gene669;Dbxref=GeneID:1096106;Name=SCF15.04c;gbkey=Gene;gene=SCF15.04c;gene_biotype=protein_coding;gene_synonym=SCF15.04c;locus_tag=SCO0683
NC_003888.3	RefSeq	CDS	725056	725580	.	-	0	ID=cds651;Parent=gene669;Dbxref=Genbank:NP_624991.1,GeneID:1096106;Name=NP_624991.1;Note=SCF15.04c%2C hypothetical protein%2C len: 174 aa. Weakly similar to several conserved proteins of undefined function e.g. Methanococcus jannaschii SW:Y714_METJA(EMBL:U67518) hypothetical protein (118 aa)%2C fasta scores opt: 182 z-score: 196.7 E(): 0.0014 30.4%25 identity in 115 aa overlap.;gbkey=CDS;gene=SCF15.04c;product=hypothetical protein;protein_id=NP_624991.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	725588	725595	.	-	.	ID=id755;gbkey=RBS
NC_003888.3	RefSeq	gene	725619	726395	.	-	.	ID=gene670;Dbxref=GeneID:1096107;Name=SCF15.05c;gbkey=Gene;gene=SCF15.05c;gene_biotype=protein_coding;gene_synonym=SCF15.05c;locus_tag=SCO0684
NC_003888.3	RefSeq	CDS	725619	726395	.	-	0	ID=cds652;Parent=gene670;Dbxref=Genbank:NP_624992.1,GeneID:1096107;Name=NP_624992.1;Note=SCF15.05c%2C unknown%2C len: 258 aa.;gbkey=CDS;gene=SCF15.05c;product=hypothetical protein;protein_id=NP_624992.1;transl_table=11
NC_003888.3	RefSeq	gene	726401	726808	.	-	.	ID=gene671;Dbxref=GeneID:1096108;Name=SCF15.06c;gbkey=Gene;gene=SCF15.06c;gene_biotype=protein_coding;gene_synonym=SCF15.06c;locus_tag=SCO0685
NC_003888.3	RefSeq	CDS	726401	726808	.	-	0	ID=cds653;Parent=gene671;Dbxref=Genbank:NP_624993.1,GeneID:1096108;Name=NP_624993.1;Note=SCF15.06c%2C unknown%2C len: 135 aa.;gbkey=CDS;gene=SCF15.06c;product=hypothetical protein;protein_id=NP_624993.1;transl_table=11
NC_003888.3	RefSeq	gene	726845	728068	.	+	.	ID=gene672;Dbxref=GeneID:1096109;Name=SCF15.07;gbkey=Gene;gene=SCF15.07;gene_biotype=protein_coding;gene_synonym=SCF15.07;locus_tag=SCO0686
NC_003888.3	RefSeq	CDS	726845	728068	.	+	0	ID=cds654;Parent=gene672;Dbxref=Genbank:NP_624994.1,GeneID:1096109;Name=NP_624994.1;Note=SCF15.07%2C possible membrane protein%2C 407 aa. Similar in parts to several hypothetical proteins e.g. Bacillus subtilis TR:O34437(EMBL:Z99108) hypothetical YfkH protein (275 aa)%2C fasta scores: opt: 542 z-score: 589.5 E(): 1.8e-25 32.0%25 identity in 284 aa overlap. Contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCF15.07;product=hypothetical protein;protein_id=NP_624994.1;transl_table=11
NC_003888.3	RefSeq	gene	728130	728924	.	-	.	ID=gene673;Dbxref=GeneID:1096110;Name=SCF15.08c;gbkey=Gene;gene=SCF15.08c;gene_biotype=protein_coding;gene_synonym=SCF15.08c;locus_tag=SCO0687
NC_003888.3	RefSeq	CDS	728130	728924	.	-	0	ID=cds655;Parent=gene673;Dbxref=Genbank:NP_624995.1,GeneID:1096110;Name=NP_624995.1;Note=SCF15.08c. probable oxidoreductase%2C len: 264 aa. Similar to many including: Escherichia coli SW:UCPA_ECOLI (EMBL:AE000330) oxidoreductase UcpA (EC 1.-.-.-) (285 aa)%2C fasta scores opt: 344 z-score: 389.1 E(): 2.7e-14 33.2%25 identity in 268 aa overlap and Streptomyces coelicolor TR:CAB55718 (EMBL:AL117387) probable oxidoreductase SCF41.15 (263 aa)%2C fasta scores opt: 418 z-score: 471.2 E(): 7.1e-19 36.5%25 identity in 255 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus. In addition to a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCF15.08c;product=oxidoreductase;protein_id=NP_624995.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	728163	728255	.	-	.	ID=id756;Dbxref=GeneID:1096110;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 41.00%2C E-value 2.7e-08;gbkey=misc_feature;gene=SCF15.08c
NC_003888.3	RefSeq	sequence_feature	728355	728903	.	-	.	ID=id757;Dbxref=GeneID:1096110;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 150.60%2C E-value 2.8e-41;gbkey=misc_feature;gene=SCF15.08c
NC_003888.3	RefSeq	sequence_feature	728418	728504	.	-	.	ID=id758;Dbxref=GeneID:1096110;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCF15.08c
NC_003888.3	RefSeq	ribosome_entry_site	728932	728937	.	-	.	ID=id759;gbkey=RBS
NC_003888.3	RefSeq	gene	729117	730289	.	+	.	ID=gene674;Dbxref=GeneID:1096111;Name=SCF15.09;gbkey=Gene;gene=SCF15.09;gene_biotype=protein_coding;gene_synonym=SCF15.09;locus_tag=SCO0688
NC_003888.3	RefSeq	CDS	729117	730289	.	+	0	ID=cds656;Parent=gene674;Dbxref=Genbank:NP_624996.1,GeneID:1096111;Name=NP_624996.1;Note=SCF15.09%2C unknown%2C len: 390 aa. Contains a probable coiled-coil between residues 285..329 (45 residues).;gbkey=CDS;gene=SCF15.09;product=hypothetical protein;protein_id=NP_624996.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	730338	730341	.	+	.	ID=id760;gbkey=RBS
NC_003888.3	RefSeq	gene	730352	730987	.	+	.	ID=gene675;Dbxref=GeneID:1096112;Name=SCF15.10;gbkey=Gene;gene=SCF15.10;gene_biotype=protein_coding;gene_synonym=SCF15.10;locus_tag=SCO0689
NC_003888.3	RefSeq	CDS	730352	730987	.	+	0	ID=cds657;Parent=gene675;Dbxref=Genbank:NP_624997.1,GeneID:1096112;Name=NP_624997.1;Note=SCF15.10%2C possible oxidoreductase%2C iron-sulphur binding subunit%2C len: 187 aa. Similar to many multipartite proteins including: the small subunit of quinoline 2-oxidoreductase from Pseudomonas putida TR:P72223(EMBL:X98131) QorS (168 aa)%2C fasta scores opt: 371 z-score: 438.8 E(): 4.6e-17 44.7%25 identity in 170 aa overlap and Acetobacter europaeus TR:O30328(EMBL:Y08696) aldehyde dehydrogenase subunit III precursor (157 aa)%2C fasta scores opt: 309 z-score: 367.9 E(): 4e-13 39.3%25 identity in 163 aa overlap. Also similar to the N-terminal iron-sulphur binding domain of Rhodobacter capsulatus (Rhodopseudomonas capsulata) TR:O54050(EMBL:AJ001013) xanthine dehydrogenase (EC 1.1.1.204) (462 aa)%2C fasta scores opt: 299 z-score: 349.6 E(): 4.2e-12 37.2%25 identity in 164 aa overlap. Contains Pfam matches to entries PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains and PF01799 fer2_2%2C 2Fe-2S iron-sulfur cluster binding domains. Also contains Prosite hits to PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature and PS00070 Aldehyde dehydrogenases cysteine active site.;gbkey=CDS;gene=SCF15.10;product=oxidoreductase%2C iron-sulfur binding subunit;protein_id=NP_624997.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	730592	730618	.	+	.	ID=id761;Dbxref=GeneID:1096112;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SCF15.10
NC_003888.3	RefSeq	sequence_feature	730778	730813	.	+	.	ID=id762;Dbxref=GeneID:1096112;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SCF15.10
NC_003888.3	RefSeq	ribosome_entry_site	730971	730982	.	+	.	ID=id763;Dbxref=GeneID:1096112;gbkey=RBS;gene=SCF15.10
NC_003888.3	RefSeq	gene	730984	731976	.	+	.	ID=gene676;Dbxref=GeneID:1096113;Name=SCF15.11;gbkey=Gene;gene=SCF15.11;gene_biotype=protein_coding;gene_synonym=SCF15.11;locus_tag=SCO0690
NC_003888.3	RefSeq	CDS	730984	731976	.	+	0	ID=cds658;Parent=gene676;Dbxref=Genbank:NP_624998.1,GeneID:1096113;Name=NP_624998.1;Note=SCF15.11%2C possible oxidoreductase%2C molybdopterin binding subunit%2C len: 330 aa. Similar to many molybdopterin binding subunits of multipartite proteins including: Thauera aromatica TR:O33820 (EMBL:AJ001830) 4-hydroxybenzoyl-coA reductase Beta-subunit (324 aa)%2C fasta scores opt: 425 z-score: 493.1 E(): 4.3e-20 36.1%25 identity in 316 aa overlap and Pseudomonas putida TR:P72222 (EMBL:X98131) quinoline 2-oxidoreductase%2C QorM (288 aa)%2C fasta scores opt: 160 z-score: 190.3 E(): 0.0032 25.5%25 identity in 325 aa overlap. Contains a Pfam match to entry PF00941 dehydrog_molyb%2C Molybdopterin binding domain in dehydrogenase.;gbkey=CDS;gene=SCF15.11;product=oxidoreductase%2C molybdopterin binding subunit;protein_id=NP_624998.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	730984	731964	.	+	.	ID=id764;Dbxref=GeneID:1096113;Note=Pfam match to entry PF00941 dehydrog_molyb%2C Molybdopterin binding domain in dehydrogenase%2C score -67.10%2C E-value 9e-08;gbkey=misc_feature;gene=SCF15.11
NC_003888.3	RefSeq	ribosome_entry_site	731994	731999	.	+	.	ID=id765;gbkey=RBS
NC_003888.3	RefSeq	gene	732005	734134	.	+	.	ID=gene677;Dbxref=GeneID:1096114;Name=SCF15.12;gbkey=Gene;gene=SCF15.12;gene_biotype=protein_coding;gene_synonym=SCF15.12,SCF42.01;locus_tag=SCO0691
NC_003888.3	RefSeq	CDS	732005	734134	.	+	0	ID=cds659;Parent=gene677;Dbxref=Genbank:NP_733511.1,GeneID:1096114;Name=NP_733511.1;Note=SCF42.01%2C possible oxidoreductase%2C partial CDS%2C len: > 369 aa. Similar to several including: Desulfovibrio gigas SW:MOP_DESGI (EMBL:X77222) aldehyde oxidoreductase (907 aa)%2C fasta scores opt: 255 z-score: 288.0 E(): 1.2e-08 28.4%25 identity in 388 aa overlap and Deinococcus radiodurans TR:AAF12400 (EMBL:AE001863) oxidoreductase (708 aa)%2C fasta scores opt: 1255 z-score: 1421.5 E():0 54.2%25 identity in 356 aa overlap. Overlaps and extends into CDS SCF15.12 on the adjoining cosmid SCF15. Contains a Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus.~SCF15.12%2C possible oxidoreductase%2C large subunit%2C partial CDS%2C len: > 374 aa. Similar to the C-terminal domain of many eukaryotic xanthine dehydrogenases including: Mus musculus (Mouse) SW:XDH_MOUSE (EMBL:X75129) xanthine dehydrogenase/oxidase (1335 aa)%2C fasta scores opt: 424 z-score: 459.8 E(): 3.1e-18 26.6%25 identity in 380 aa overlap and Homo sapiens (Human) SW:XDH_HUMAN (EMBL:D11456) xanthine dehydrogenase/oxidase (1332 aa)%2C fasta scores opt: 396 z-score: 429.4 E(): 1.5e-16 25.7%25 identity in 378 aa overlap. Also similar to Rhodobacter capsulatus (Rhodopseudomonas capsulata) TR:O54051(EMBL:AJ001013) xanthine dehydrogenase (EC 1.1.1.204) (779 aa)%2C fasta scores opt: 452 z-score: 493.7 E(): 4e-20 30.1%25 identity in 375 aa overlap. Contains a Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase.;gbkey=CDS;gene=SCF15.12;product=oxidoreductase;protein_id=NP_733511.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	732068	733126	.	+	.	ID=id766;Dbxref=GeneID:1096114;Note=Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score -223.30%2C E-value 7.1e-07;gbkey=misc_feature;gene=SCF15.12
NC_003888.3	RefSeq	sequence_feature	733025	733915	.	+	.	ID=id767;Dbxref=GeneID:1096114;Note=Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score -294.50%2C E-value 0.00012;gbkey=misc_feature;gene=SCF15.12
NC_003888.3	RefSeq	gene	734210	735667	.	-	.	ID=gene678;Dbxref=GeneID:1096115;Name=SCF42.02c.;gbkey=Gene;gene=SCF42.02c.;gene_biotype=protein_coding;gene_synonym=SCF42.02c.;locus_tag=SCO0692
NC_003888.3	RefSeq	CDS	734210	735667	.	-	0	ID=cds660;Parent=gene678;Dbxref=Genbank:NP_624999.1,GeneID:1096115;Name=NP_624999.1;Note=SCF42.02c%2C possible membrane protein%2C len: 485 aa. Rich in the amino acid Ala. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF42.02c.;product=hypothetical protein;protein_id=NP_624999.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	735839	735843	.	+	.	ID=id768;gbkey=RBS
NC_003888.3	RefSeq	gene	735845	736192	.	+	.	ID=gene679;Dbxref=GeneID:1096116;Name=SCF42.03;gbkey=Gene;gene=SCF42.03;gene_biotype=protein_coding;gene_synonym=SCF42.03;locus_tag=SCO0693
NC_003888.3	RefSeq	CDS	735845	736192	.	+	0	ID=cds661;Parent=gene679;Dbxref=Genbank:NP_625000.1,GeneID:1096116;Name=NP_625000.1;Note=SCF42.03%2C possible membrane protein%2C len: 115 aa. Contains a possible N-terminal signal sequence and a possible membrane spanning hydrophobic domain. Rich in Ala and Leu.;gbkey=CDS;gene=SCF42.03;product=hypothetical protein;protein_id=NP_625000.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	736303	736306	.	+	.	ID=id769;gbkey=RBS
NC_003888.3	RefSeq	gene	736312	736503	.	+	.	ID=gene680;Dbxref=GeneID:1096117;Name=SCF42.04;gbkey=Gene;gene=SCF42.04;gene_biotype=protein_coding;gene_synonym=SCF42.04;locus_tag=SCO0694
NC_003888.3	RefSeq	CDS	736312	736503	.	+	0	ID=cds662;Parent=gene680;Dbxref=Genbank:NP_625001.1,GeneID:1096117;Name=NP_625001.1;Note=SCF42.04%2C unknown%2C len: 62 aa.;gbkey=CDS;gene=SCF42.04;product=hypothetical protein;protein_id=NP_625001.1;transl_table=11
NC_003888.3	RefSeq	gene	736520	737506	.	+	.	ID=gene681;Dbxref=GeneID:1096118;Name=SCF42.05;gbkey=Gene;gene=SCF42.05;gene_biotype=protein_coding;gene_synonym=SCF42.05;locus_tag=SCO0695
NC_003888.3	RefSeq	CDS	736520	737506	.	+	0	ID=cds663;Parent=gene681;Dbxref=Genbank:NP_625002.1,GeneID:1096118;Name=NP_625002.1;Note=SCF42.05%2C unknown%2C len: 328 aa%3B similar to TR:Q9KZT0 (EMBL:AL353832) hypothetical protein SCE6.08 from Streptomyces coelicolor (326 aa) fasta scores%3B opt: 371%2C Z-score: 407.1%2C E(): 4.8e-15%2C 35.629%25 identity (39.145%25 ungapped) in 334 aa overlap.;gbkey=CDS;gene=SCF42.05;product=hypothetical protein;protein_id=NP_625002.1;transl_table=11
NC_003888.3	RefSeq	gene	737846	738340	.	-	.	ID=gene682;Dbxref=GeneID:1096119;Name=SCF42.06c;gbkey=Gene;gene=SCF42.06c;gene_biotype=protein_coding;gene_synonym=SCF42.06c;locus_tag=SCO0696
NC_003888.3	RefSeq	CDS	737846	738340	.	-	0	ID=cds664;Parent=gene682;Dbxref=Genbank:NP_625003.1,GeneID:1096119;Name=NP_625003.1;Note=SCF42.06c%2C possible integral membrane protein%2C len: 164 aa. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF42.06c;product=hypothetical protein;protein_id=NP_625003.1;transl_table=11
NC_003888.3	RefSeq	gene	738595	739482	.	+	.	ID=gene683;Dbxref=GeneID:1096120;Name=SCF42.07;gbkey=Gene;gene=SCF42.07;gene_biotype=pseudogene;gene_synonym=SCF42.07;locus_tag=SCO0697;pseudo=true
NC_003888.3	RefSeq	sequence_feature	738595	739482	.	+	.	ID=id770;Dbxref=GeneID:1096120;Note=SCF42.07%2C possible AraC-family regulator%2C pseudogene%2C len: 309 aa. Similar to several other AraC-family transcriptional regulators from Streptomyces coelicolor e.g. TR:CAB61299(EMBL:AL132991) SCF55.29 (311 aa) and TR:Q9XA73 (EMBL:AL096822) SCGD3.05 (334 aa). Contains a frameshift after codon 188%2C following a possible deletion event.%3B AraC-family regulator (pseudogene);gbkey=misc_feature;gene=SCF42.07
NC_003888.3	RefSeq	gene	739510	739875	.	-	.	ID=gene684;Dbxref=GeneID:1096121;Name=SCF42.08c;gbkey=Gene;gene=SCF42.08c;gene_biotype=protein_coding;gene_synonym=SCF42.08c;locus_tag=SCO0698
NC_003888.3	RefSeq	CDS	739510	739875	.	-	0	ID=cds665;Parent=gene684;Dbxref=Genbank:NP_625004.1,GeneID:1096121;Name=NP_625004.1;Note=SCF42.08c%2C unknown%2C len: 121 aa.;gbkey=CDS;gene=SCF42.08c;product=hypothetical protein;protein_id=NP_625004.1;transl_table=11
NC_003888.3	RefSeq	gene	739938	740231	.	-	.	ID=gene685;Dbxref=GeneID:1096122;Name=SCF42.09c;gbkey=Gene;gene=SCF42.09c;gene_biotype=protein_coding;gene_synonym=SCF42.09c;locus_tag=SCO0699
NC_003888.3	RefSeq	CDS	739938	740231	.	-	0	ID=cds666;Parent=gene685;Dbxref=Genbank:NP_625005.1,GeneID:1096122;Name=NP_625005.1;Note=SCF42.09c%2C unknown%2C len: 97 aa.;gbkey=CDS;gene=SCF42.09c;product=hypothetical protein;protein_id=NP_625005.1;transl_table=11
NC_003888.3	RefSeq	gene	740314	742083	.	-	.	ID=gene686;Dbxref=GeneID:1096123;Name=SCF42.10c;gbkey=Gene;gene=SCF42.10c;gene_biotype=protein_coding;gene_synonym=SCF42.10c;locus_tag=SCO0700
NC_003888.3	RefSeq	CDS	740314	742083	.	-	0	ID=cds667;Parent=gene686;Dbxref=Genbank:NP_625006.1,GeneID:1096123;Name=NP_625006.1;Note=SCF42.10c%2C probable ABC transporter%2C ATP-binding component%2C len: 589 aa. The N-terminus is identical to the previously sequenced Streptomyces coelicolor TR:Q53899(EMBL:X60316) pleiotropic regulatory locus AbaA%2C OrfC (fragment)(>131 aa)%2C fasta scores opt: 856 z-score: 951.7 E(): 0 100.0%25 identity in 131 aa overlap. Also highly similar to many including: Escherichia coli SW:MSBA_ECOLI(EMBL:Z11796) probable transport ATP-binding protein%2C MsbA (582 aa)%2C fasta scores opt: 875 z-score: 963.0 E():0 31.4%25 identity in 566 aa overlap and Deinococcus radiodurans TR:AAF12435(EMBL:AE001863) ABC transporter%2C ATP-binding protein (602 aa)%2C fasta scores opt: 941 z-score: 1035.3 E():0 34.4%25 identity in 593 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and Pfam matches to entries PF00005 ABC_tran%2C ABC transporter and PF00664 ABC_membrane%2C ABC transporter transmembrane region. Also contains Prosite hits to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCF42.10c;product=ABC transporter ATP-binding protein;protein_id=NP_625006.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	740398	740952	.	-	.	ID=id771;Dbxref=GeneID:1096123;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 226.10%2C E-value 5.2e-64;gbkey=misc_feature;gene=SCF42.10c
NC_003888.3	RefSeq	sequence_feature	740575	740619	.	-	.	ID=id772;Dbxref=GeneID:1096123;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF42.10c
NC_003888.3	RefSeq	sequence_feature	740908	740931	.	-	.	ID=id773;Dbxref=GeneID:1096123;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF42.10c
NC_003888.3	RefSeq	sequence_feature	741166	741984	.	-	.	ID=id774;Dbxref=GeneID:1096123;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 40.40%2C E-value 4.2e-08;gbkey=misc_feature;gene=SCF42.10c
NC_003888.3	RefSeq	sequence_feature	741691	744357	.	-	.	ID=id775;Note=shares 99.9 %25 identity with S.coelicolor (EMBL:X60316) AbaA a pleiotropic regulatory locus for antibiotic production.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	742092	742098	.	-	.	ID=id776;gbkey=RBS
NC_003888.3	RefSeq	gene	742242	742685	.	-	.	ID=gene687;Dbxref=GeneID:1096124;Name=SCF42.11c;gbkey=Gene;gene=SCF42.11c;gene_biotype=protein_coding;gene_synonym=SCF42.11c;locus_tag=SCO0701
NC_003888.3	RefSeq	CDS	742242	742685	.	-	0	ID=cds668;Parent=gene687;Dbxref=Genbank:NP_625007.1,GeneID:1096124;Name=NP_625007.1;Note=SCF42.11c%2C unknown%2C len: 147 aa. Identical to the previously published Streptomyces coelicolor TR:Q53898(EMBL:X60316) pleiotropic regulatory locus AbaA%2C OrfB (147 aa)%2C fasta scores opt: 958 z-score: 1195.2 E(): 0 99.3%25 identity in 147 aa overlap.;gbkey=CDS;gene=SCF42.11c;product=hypothetical protein;protein_id=NP_625007.1;transl_table=11
NC_003888.3	RefSeq	gene	742816	743394	.	-	.	ID=gene688;Dbxref=GeneID:1096125;Name=SCF42.12c;gbkey=Gene;gene=SCF42.12c;gene_biotype=protein_coding;gene_synonym=SCF42.12c;locus_tag=SCO0702
NC_003888.3	RefSeq	CDS	742816	743394	.	-	0	ID=cds669;Parent=gene688;Dbxref=Genbank:NP_625008.1,GeneID:1096125;Name=NP_625008.1;Note=SCF42.12c%2C possible regulator%2C len: 192 aa. Identical to the previously published Streptomyces coelicolor TR:Q53897 (EMBL:X60316) pleiotropic regulatory locus AbaA%2C OrfA (192 aa)%2C fasta scores opt: 1308 z-score: 1344.1 E():0 99.5%25 identity in 192 aa overlap. Also similar to Streptomyces coelicolor TR:Q9X8K2 (EMBL:AL049841) regulator SCE9.30 (154 aa)%2C fasta scores opt: 278 z-score: 299.0 E(): 2.9e-09 39.9%25 identity in 148 aa overlap.;gbkey=CDS;gene=SCF42.12c;product=regulator;protein_id=NP_625008.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	743399	743405	.	-	.	ID=id777;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	743563	743569	.	+	.	ID=id778;gbkey=RBS
NC_003888.3	RefSeq	gene	743575	743802	.	+	.	ID=gene689;Dbxref=GeneID:1096126;Name=SCF42.13;gbkey=Gene;gene=SCF42.13;gene_biotype=protein_coding;gene_synonym=SCF42.13;locus_tag=SCO0703
NC_003888.3	RefSeq	CDS	743575	743802	.	+	0	ID=cds670;Parent=gene689;Dbxref=Genbank:NP_625009.1,GeneID:1096126;Name=NP_625009.1;Note=SCF42.13%2C possible regulator%2C len: 75 aa. Identical to the previously published Streptomyces coelicolor TR:Q53896 (EMBL:X60316) pleiotropic antibiotic regulatory locus AbaA%2C OrfD (75 aa)%2C fasta scores opt: 507 z-score: 699.1 E(): 1.5e-31 98.7%25 identity in 75 aa overlap. Also highly similar to Streptomyces coelicolor TR:Q9X8K3 (EMBL:AL049841)  regulator SCE9.31c (83 aa)%2C fasta scores opt: 308 z-score: 431.8 E(): 1.2e-16 63.6%25 identity in 77 aa overlap.;gbkey=CDS;gene=SCF42.13;product=regulator;protein_id=NP_625009.1;transl_table=11
NC_003888.3	RefSeq	gene	743929	744847	.	+	.	ID=gene690;Dbxref=GeneID:1096127;Name=SCF42.14;gbkey=Gene;gene=SCF42.14;gene_biotype=pseudogene;gene_synonym=SCF42.14;locus_tag=SCO0704;pseudo=true
NC_003888.3	RefSeq	sequence_feature	743929	744847	.	+	.	ID=id779;Dbxref=GeneID:1096127;Note=SCF42.14%2C possible DNA-binding protein%2C pseudogene. The N-terminal is identical to the previously published Streptomyces coelicolor TR:Q53895 (EMBL:X60316) pleiotropic antibiotic regulatory locus AbaA%2C OrfE (111 aa). Sequence anomalies with the previously published sequence (EMBL:X60316) occur after codon 68. This CDS is also highly similar to Streptomyces coelicolor TR:Q9X8K0 (EMBL:AL049841) hypothetical 30.9 KD protein%2C SCE9.28C (274 aa). This CDS contains a frameshift after codon 211. Note codon 27 is an alternative translational start site. Contains a Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix with a possible helix-turn-helix motif situated between residues 42..63 (+3.80 SD).%3B DNA-binding protein (pseudogene).;gbkey=misc_feature;gene=SCF42.14
NC_003888.3	RefSeq	sequence_feature	744025	744195	.	+	.	ID=id780;Dbxref=GeneID:1096127;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 30.70%2C E-value 3.5e-05;gbkey=misc_feature;gene=SCF42.14
NC_003888.3	RefSeq	stem_loop	744856	744904	.	-	.	ID=id781;Note=possible stem loop with 100 %25 matches over 24 bases and a loop of 1 base.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	744945	745763	.	-	.	ID=gene691;Dbxref=GeneID:1096128;Name=SCF42.15c;gbkey=Gene;gene=SCF42.15c;gene_biotype=protein_coding;gene_synonym=SCF42.15c;locus_tag=SCO0705
NC_003888.3	RefSeq	CDS	744945	745763	.	-	0	ID=cds671;Parent=gene691;Dbxref=Genbank:NP_625010.1,GeneID:1096128;Name=NP_625010.1;Note=SCF42.15c%2C unknown%2C len: 272 aa. Similar to several proteins of undefined function from Streptomyces coelicolor TR:O86540(EMBL:AL031350) SC1F2.03C (300 aa)%2C fasta scores opt: 639 z-score: 770.1 E():0 41.4%25 identity in 261 aa overlap and TR:CAB59702(EMBL:AL132707) probable mannanase SCF51.04C (272 aa)%2C fasta scores opt: 744 z-score: 896.2 E():0 49.6%25 identity in 248 aa overlap;gbkey=CDS;gene=SCF42.15c;product=hypothetical protein;protein_id=NP_625010.1;transl_table=11
NC_003888.3	RefSeq	gene	745911	747194	.	-	.	ID=gene692;Dbxref=GeneID:1096129;Name=SCF42.16c;gbkey=Gene;gene=SCF42.16c;gene_biotype=protein_coding;gene_synonym=SCF42.16c;locus_tag=SCO0706
NC_003888.3	RefSeq	CDS	745911	747194	.	-	0	ID=cds672;Parent=gene692;Dbxref=Genbank:NP_625011.1,GeneID:1096129;Name=NP_625011.1;Note=SCF42.16c%2C possible lipoprotein%2C len: 427 aa%2C Weakly similar to Pseudomonas aeruginosa SW:BRAC_PSEAE(EMBL:M31071) leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein precursor (373 aa)%2C fasta scores opt: 239 z-score: 250.6 E(): 1.4e-06 24.0%25 identity in 341 aa overlap. Contains an appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF42.16c;product=lipoprotein;protein_id=NP_625011.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	747105	747137	.	-	.	ID=id782;Dbxref=GeneID:1096129;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCF42.16c
NC_003888.3	RefSeq	gene	747191	748387	.	-	.	ID=gene693;Dbxref=GeneID:1096130;Name=SCF42.17c;gbkey=Gene;gene=SCF42.17c;gene_biotype=protein_coding;gene_synonym=SCF42.17c;locus_tag=SCO0707
NC_003888.3	RefSeq	CDS	747191	748387	.	-	0	ID=cds673;Parent=gene693;Dbxref=Genbank:NP_625012.1,GeneID:1096130;Name=NP_625012.1;Note=SCF42.17c%2C possible branched-chain amino acid ABC transport permease%2C len: 398 aa. Similar to many amino acid transporters including: Pseudomonas aeruginosa SW:BRAE_PSEAE (EMBL:D90223) high-affinity branched-chain amino acid transport protein BraE (417 aa)%2C fasta scores opt: 327 z-score: 334.2 E(): 3.2e-11 28.3%25 identity in 336 aa overlap and Streptomyces coelicolor TR:CAB52066 (EMBL:AL109732) branched-chain amino acid ABC transporter permease SC7H2.24 (608 aa)%2C fasta scores opt: 403 z-score: 407.6 E(): 2.6e-15 31.0%25 identity in 342 aa overlap. Contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF42.17c;product=branched-chain amino acid ABC transporter permease;protein_id=NP_625012.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	747203	747207	.	-	.	ID=id783;Dbxref=GeneID:1096130;gbkey=RBS;gene=SCF42.17c
NC_003888.3	RefSeq	gene	748380	749279	.	-	.	ID=gene694;Dbxref=GeneID:1096131;Name=SCF42.18c;gbkey=Gene;gene=SCF42.18c;gene_biotype=protein_coding;gene_synonym=SCF42.18c;locus_tag=SCO0708
NC_003888.3	RefSeq	CDS	748380	749279	.	-	0	ID=cds674;Parent=gene694;Dbxref=Genbank:NP_625013.1,GeneID:1096131;Name=NP_625013.1;Note=SCF42.18c%2C possible branched-chain amino acid ABC transporter%2C len: 299 aa. Similar to many other transport proteins including: Pseudomonas aeruginosa SW:BRAD_PSEAE(EMBL:D90223) high-affinity branched-chain amino acid transport protein%2C BraD (307 aa)%2C fasta scores opt: 318 z-score: 364.2 E(): 6.8e-13 28.5%25 identity in 312 aa overlap and Deinococcus radiodurans TR:AAF09863(EMBL:AE001889) branched-chain amino acid ABC transporter%2C permease (285 aa)%2C fasta scores opt: 432 z-score: 492.1 E(): 5.1e-20 34.6%25 identity in 295 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF42.18c;product=branched-chain amino acid ABC transporter;protein_id=NP_625013.1;transl_table=11
NC_003888.3	RefSeq	gene	749276	750076	.	-	.	ID=gene695;Dbxref=GeneID:1096132;Name=SCF42.19c;gbkey=Gene;gene=SCF42.19c;gene_biotype=protein_coding;gene_synonym=SCF42.19c;locus_tag=SCO0709
NC_003888.3	RefSeq	CDS	749276	750076	.	-	0	ID=cds675;Parent=gene695;Dbxref=Genbank:NP_625014.1,GeneID:1096132;Name=NP_625014.1;Note=SCF42.19c%2C possible branched-chain amino acid transport ATP-binding protein%2C len: 266 aa. Similar to many including: Pseudomonas aeruginosa SW:BRAF_PSEAE(EMBL:D90223) high-affinity branched-chain amino acid transport ATP-binding protein%2C BraF (255 aa)%2C fasta scores opt: 689 z-score: 786.7 E():0 41.3%25 identity in 252 aa overlap and Deinococcus radiodurans TR:AAF11669(EMBL:AE002047) branched-chain amino acid ABC transporter%2C ATP-binding protein (259 aa)%2C fasta scores opt: 749 z-score: 854.2 E():0 46.9%25 identity in 256 aa overlap. Also similar to Streptomyces coelicolor TR:CAB52067(EMBL:AL109732) branched-chain amino acid transport ATP-binding protein%2C SC7H2.25 (309 aa)%2C fasta scores opt: 638 z-score: 728.0 E():0 42.4%25 identity in 269 aa overlap and to the adjoining CDS on this cosmid%2C SCF42.20c (263 aa)%2C fasta scores opt: 364 z-score: 308.0 E(): 9.7e-12 35.8%25 identity in 271 aa overlap. Contains Prosite hits to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a Pfam match to entry PF00005 ABC_tran%2C ABC transporter.;gbkey=CDS;gene=SCF42.19c;product=ABC transporter ATP-binding protein;protein_id=NP_625014.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	749287	749291	.	-	.	ID=id784;Dbxref=GeneID:1096132;gbkey=RBS;gene=SCF42.19c
NC_003888.3	RefSeq	sequence_feature	749375	749971	.	-	.	ID=id785;Dbxref=GeneID:1096132;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 186.30%2C E-value 5e-52;gbkey=misc_feature;gene=SCF42.19c
NC_003888.3	RefSeq	sequence_feature	749561	749605	.	-	.	ID=id786;Dbxref=GeneID:1096132;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF42.19c
NC_003888.3	RefSeq	sequence_feature	749927	749950	.	-	.	ID=id787;Dbxref=GeneID:1096132;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF42.19c
NC_003888.3	RefSeq	gene	750073	750864	.	-	.	ID=gene696;Dbxref=GeneID:1096133;Name=SCF42.20c;gbkey=Gene;gene=SCF42.20c;gene_biotype=protein_coding;gene_synonym=SCF42.20c;locus_tag=SCO0710
NC_003888.3	RefSeq	CDS	750073	750864	.	-	0	ID=cds676;Parent=gene696;Dbxref=Genbank:NP_625015.1,GeneID:1096133;Name=NP_625015.1;Note=SCF42.20c%2C possible branched-chain amino acid transport ATP-binding protein%2C len: 263 aa. Similar to many including: Pseudomonas aeruginosa SW:BRAG_PSEAE(EMBL:D90223) high-affinity branched-chain amino acid transport ATP-binding protein%2C BraG (233 aa)%2C fasta scores opt: 642 z-score: 685.0 E(): 9.1e-31 46.7%25 identity in 240 aa overlap and Streptomyces coelicolor TR:CAB52068(EMBL:AL109732) branched-chain amino acid transport ATP-binding protein%2C SC7H2.26 (238 aa)%2C fasta scores opt: 724 z-score: 770.7 E():0 48.5%25 identity in 241 aa overlap. Also similar to the adjoining CDS on this cosmid%2C SCF42.19c (263 aa)%2C fasta scores opt: 364 z-score: 308.0 E(): 9.7e-12 35.8%25 identity in 271 aa overlap. Contains Prosite hits to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a Pfam match to entry PF00005 ABC_tran%2C ABC transporter.;gbkey=CDS;gene=SCF42.20c;product=ABC transporter ATP-binding protein;protein_id=NP_625015.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	750181	750753	.	-	.	ID=id788;Dbxref=GeneID:1096133;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 142.60%2C E-value 6.9e-39;gbkey=misc_feature;gene=SCF42.20c
NC_003888.3	RefSeq	sequence_feature	750364	750408	.	-	.	ID=id789;Dbxref=GeneID:1096133;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF42.20c
NC_003888.3	RefSeq	sequence_feature	750709	750732	.	-	.	ID=id790;Dbxref=GeneID:1096133;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF42.20c
NC_003888.3	RefSeq	ribosome_entry_site	750870	750875	.	-	.	ID=id791;gbkey=RBS
NC_003888.3	RefSeq	gene	751917	753197	.	-	.	ID=gene697;Dbxref=GeneID:1096134;Name=SCF42.21c;gbkey=Gene;gene=SCF42.21c;gene_biotype=protein_coding;gene_synonym=SCF42.21c;locus_tag=SCO0711
NC_003888.3	RefSeq	CDS	751917	753197	.	-	0	ID=cds677;Parent=gene697;Dbxref=Genbank:NP_625016.1,GeneID:1096134;Name=NP_625016.1;Note=SCF42.21c%2C hypothetical protein%2C len: 426 aa. The N-terminal 234 aa are identical to the previously published Streptomyces coelicolor TR:Q9ZIW4(EMBL:AF009336) hypothetical protein Orf4 (310 aa)%2C fasta scores opt: 1581 z-score: 1692.1 E():0 79.6%25 identity in 323 aa overlap. Sequence anomalies with the previously published sequence occur after codon 234. This CDS is also highly similar to Streptomyces sp. TR:O05479(EMBL:M86351) hypothetical protein encoded downstream of lipA and lipR (481 aa)%2C fasta scores opt: 923 z-score: 988.2 E(): 0 50.6%25 identity in 413 aa overlap.;gbkey=CDS;gene=SCF42.21c;product=hypothetical protein;protein_id=NP_625016.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	751930	758220	.	-	.	ID=id792;Note=shares 99.9%25 identity with Streptomyces coelicolor (EMBL:AF009336) lipase (lipA)%2C and LipR activator (lipR) genes%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	753318	756143	.	-	.	ID=gene698;Dbxref=GeneID:1096135;Name=lipR;gbkey=Gene;gene=lipR;gene_biotype=protein_coding;gene_synonym=lipR,SCF42.22c;locus_tag=SCO0712
NC_003888.3	RefSeq	CDS	753318	756143	.	-	0	ID=cds678;Parent=gene698;Dbxref=Genbank:NP_625017.1,GeneID:1096135;Name=NP_625017.1;Note=SCF42.22c%2C lipR%2C transcriptional activator%2C len: 941 aa. Identical to the previously sequenced and characterised: Streptomyces coelicolor TR:Q9ZIW5 (EMBL:AF009336) transcriptional activator of lipA%2C LipR (941 aa). Contains a Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and a helix-turn-helix motif situated between residues 864..885 (+4.08 SD).;gbkey=CDS;gene=lipR;product=transcriptional activator;protein_id=NP_625017.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	753381	753578	.	-	.	ID=id793;Dbxref=GeneID:1096135;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 52.10%2C E-value 1.2e-11;gbkey=misc_feature;gene=lipR
NC_003888.3	RefSeq	gene	756314	757246	.	-	.	ID=gene699;Dbxref=GeneID:1096136;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;gene_synonym=lipA,SCF42.23c;locus_tag=SCO0713
NC_003888.3	RefSeq	CDS	756314	757246	.	-	0	ID=cds679;Parent=gene699;Dbxref=Genbank:NP_625018.1,GeneID:1096136;Name=NP_625018.1;Note=SCF42.23c%2C lipA%2C lipase (hypothetical protein)%2C len: 310 aa. Identical to the previously sequenced and characterised: Streptomyces coelicolor TR:Q9ZIW6(EMBL:AF009336) lipase%2C LipA (310 aa). Contains a Prosite hit to PS00120 Lipases%2C serine active site and a possible hydrophobic domain close to the N-terminus;gbkey=CDS;gene=lipA;product=lipase;protein_id=NP_625018.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	756701	756730	.	-	.	ID=id794;Dbxref=GeneID:1096136;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=lipA
NC_003888.3	RefSeq	gene	757637	758524	.	+	.	ID=gene700;Dbxref=GeneID:1096137;Name=SCF42.24;gbkey=Gene;gene=SCF42.24;gene_biotype=protein_coding;gene_synonym=SCF42.24;locus_tag=SCO0714
NC_003888.3	RefSeq	CDS	757637	758524	.	+	0	ID=cds680;Parent=gene700;Dbxref=Genbank:NP_625019.1,GeneID:1096137;Name=NP_625019.1;Note=SCF42.24%2C possible oxidoreductase%2C len: 295 aa. Identical to the previously sequenced Streptomyces coelicolor TR:Q9ZIW7 (EMBL:AF009336) Orf1 (fragment) (>195 aa). Also weakly similar to Sinorhizobium meliloti TR:O68965 (EMBL:AF059313) myo-inositol dehydrogenase (EC 1.1.1.18) (330 aa)%2C fasta scores opt: 242 z-score: 275.5 E(): 5.9e-08 26.5%25 identity in 302 aa overlap. Contains a Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family;gbkey=CDS;gene=SCF42.24;product=oxidoreductase;protein_id=NP_625019.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	757637	758329	.	+	.	ID=id795;Dbxref=GeneID:1096137;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 97.20%2C E-value 3.2e-25;gbkey=misc_feature;gene=SCF42.24
NC_003888.3	RefSeq	gene	758531	758902	.	-	.	ID=gene701;Dbxref=GeneID:1096138;Name=SCF42.25c;gbkey=Gene;gene=SCF42.25c;gene_biotype=protein_coding;gene_synonym=SCF42.25c;locus_tag=SCO0715
NC_003888.3	RefSeq	CDS	758531	758902	.	-	0	ID=cds681;Parent=gene701;Dbxref=Genbank:NP_625020.1,GeneID:1096138;Name=NP_625020.1;Note=SCF42.25c%2C unknown%2C len: 123 aa.;gbkey=CDS;gene=SCF42.25c;product=hypothetical protein;protein_id=NP_625020.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	758907	758911	.	-	.	ID=id796;gbkey=RBS
NC_003888.3	RefSeq	gene	759197	760399	.	+	.	ID=gene702;Dbxref=GeneID:1096139;Name=SCF42.26;gbkey=Gene;gene=SCF42.26;gene_biotype=protein_coding;gene_synonym=SCF42.26;locus_tag=SCO0716
NC_003888.3	RefSeq	CDS	759197	760399	.	+	0	ID=cds682;Parent=gene702;Dbxref=Genbank:NP_625021.1,GeneID:1096139;Name=NP_625021.1;Note=SCF42.26%2C possible glycosyl hydrolase (hypothetical protein)%2C len: 400 aa. Similar to several including: Arthrobacter sp. (strain YCWD3) SW:E13B_ARTSP(EMBL:D23668) glucan endo-1%2C3-beta-glucosidase precursor (EC 3.2.1.39) (548 aa)%2C fasta scores opt: 425 z-score: 452.8 E(): 7.8e-18 34.5%25 identity in 414 aa overlap and Streptomyces matensis TR:Q9Z4I2(EMBL:AB019428) laminaripentaose-producing beta-1%2C3-guluase (lphase) precursor (401 aa)%2C fasta scores opt: 477 z-score: 509.6 E(): 5.4e-21 38.7%25 identity in 413 aa overlap. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SCF42.26;product=glycosyl hydrolase;protein_id=NP_625021.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	760457	760461	.	+	.	ID=id797;gbkey=RBS
NC_003888.3	RefSeq	gene	760471	761598	.	+	.	ID=gene703;Dbxref=GeneID:1096140;Name=SCF42.27;gbkey=Gene;gene=SCF42.27;gene_biotype=protein_coding;gene_synonym=SCF42.27;locus_tag=SCO0717
NC_003888.3	RefSeq	CDS	760471	761598	.	+	0	ID=cds683;Parent=gene703;Dbxref=Genbank:NP_625022.1,GeneID:1096140;Name=NP_625022.1;Note=SCF42.27%2C possible integral membrane protein%2C len: 375 aa. Similar to several other membrane proteins from Streptomyces coelicolor e.g. TR:CAB56388(EMBL:AL118515) SCD17.11 (454 aa)%2C fasta scores opt: 569 z-score: 648.9 E(): 9.3e-29 36.4%25 identity in 360 aa overlap. Contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCF42.27;product=hypothetical protein;protein_id=NP_625022.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	761662	761667	.	+	.	ID=id798;gbkey=RBS
NC_003888.3	RefSeq	gene	761675	761896	.	+	.	ID=gene704;Dbxref=GeneID:1096141;Name=SCF42.28;gbkey=Gene;gene=SCF42.28;gene_biotype=protein_coding;gene_synonym=SCF42.28;locus_tag=SCO0718
NC_003888.3	RefSeq	CDS	761675	761896	.	+	0	ID=cds684;Parent=gene704;Dbxref=Genbank:NP_625023.1,GeneID:1096141;Name=NP_625023.1;Note=SCF42.28%2C unknown%2C len: 73 aa.;gbkey=CDS;gene=SCF42.28;product=hypothetical protein;protein_id=NP_625023.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	761903	761944	.	+	.	ID=id799;Note=possible stem loop with 100 %25 matches over 18 bases and a loop of 6 bases.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	762009	762485	.	-	.	ID=gene705;Dbxref=GeneID:1096142;Name=SCF42.29c;gbkey=Gene;gene=SCF42.29c;gene_biotype=protein_coding;gene_synonym=SCF42.29c;locus_tag=SCO0719
NC_003888.3	RefSeq	CDS	762009	762485	.	-	0	ID=cds685;Parent=gene705;Dbxref=Genbank:NP_625024.1,GeneID:1096142;Name=NP_625024.1;Note=SCF42.29c%2C hypothetical protein%2C len: 158 aa%3B similar to TR:Q9KZJ6 (EMBL:AL353863) Streptomyces coelicolor hypothetical protein SCG8A.03%2C 156 aa%3B fasta scores: opt: 570 Z-score: 608.7 E(): 2.8e-26%3B 59.477%25 identity in 153 aa overlap;gbkey=CDS;gene=SCF42.29c;product=hypothetical protein;protein_id=NP_625024.1;transl_table=11
NC_003888.3	RefSeq	gene	762558	764051	.	-	.	ID=gene706;Dbxref=GeneID:1096143;Name=SCF42.30c;gbkey=Gene;gene=SCF42.30c;gene_biotype=protein_coding;gene_synonym=SCF42.30c;locus_tag=SCO0720
NC_003888.3	RefSeq	CDS	762558	764051	.	-	0	ID=cds686;Parent=gene706;Dbxref=Genbank:NP_625025.1,GeneID:1096143;Name=NP_625025.1;Note=SCF42.30c%2C possible integral membrane protein%2C len: 497 aa. Weakly similar to several proteins of unknown function e.g. Mycobacterium tuberculosis SW:YT19_MYCTU(EMBL:Z79700) (455 aa)%2C fasta scores opt: 157 z-score: 177.3 E(): 0.017 27.1%25 identity in 450 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF42.30c;product=hypothetical protein;protein_id=NP_625025.1;transl_table=11
NC_003888.3	RefSeq	gene	764216	766594	.	-	.	ID=gene707;Dbxref=GeneID:1096144;Name=SCF42.31c.;gbkey=Gene;gene=SCF42.31c.;gene_biotype=protein_coding;gene_synonym=SCF42.31c.;locus_tag=SCO0721
NC_003888.3	RefSeq	CDS	764216	766594	.	-	0	ID=cds687;Parent=gene707;Dbxref=Genbank:NP_625026.1,GeneID:1096144;Name=NP_625026.1;Note=SCF42.31c%2C possible glycosyl transferase%2C len: 792 aa. Similar to Lactobacillus sanfrancisco TR:O87772 (EMBL:AJ224340) maltosephosphorylase (EC 2.4.1.8) MapA (753 aa)%2C fasta scores opt: 1045 z-score: 1168.4 E():0 29.5%25 identity in 766 aa overlap. Also highly similar to a number of proteins of undefined function e.g. Mycobacterium tuberculosis SW:YY01_MYCTU(EMBL:Z77165) (786 aa)%2C fasta scores opt: 3054 z-score: 3419.0 E():0 59.1%25 identity in 785 aa overlap;gbkey=CDS;gene=SCF42.31c.;product=glycosyl transferase;protein_id=NP_625026.1;transl_table=11
NC_003888.3	RefSeq	gene	766591	767331	.	-	.	ID=gene708;Dbxref=GeneID:1096145;Name=SCF42.32;gbkey=Gene;gene=SCF42.32;gene_biotype=protein_coding;gene_synonym=SCF42.32;locus_tag=SCO0722
NC_003888.3	RefSeq	CDS	766591	767331	.	-	0	ID=cds688;Parent=gene708;Dbxref=Genbank:NP_625027.1,GeneID:1096145;Name=NP_625027.1;Note=SCF42.32%2C possible hydrolase%2C len: 246 aa. Similar to several proteins of undefined function including: Mycobacterium tuberculosis SW:Y09T_MYCTU (EMBL:Z77165) (262 aa)%2C fasta scores opt: 888 z-score: 1047.3 E():0 56.3%25 identity in 245 aa overlap and Mycobacterium leprae SW:YY00_MYCLE (EMBL:U00015) (261 aa) fasta scores opt: 843 z-score: 994.7 E():0 51.6%25 identity in 248 aa overlap. Contains a Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase.;gbkey=CDS;gene=SCF42.32;product=hydrolase;protein_id=NP_625027.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	766669	767301	.	-	.	ID=id800;Dbxref=GeneID:1096145;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 105.90%2C E-value 7.9e-28;gbkey=misc_feature;gene=SCF42.32
NC_003888.3	RefSeq	gene	767385	768074	.	+	.	ID=gene709;Dbxref=GeneID:1096146;Name=frcK;gbkey=Gene;gene=frcK;gene_biotype=protein_coding;gene_synonym=3SC5B7.01,SCF42.33;locus_tag=SCO0723
NC_003888.3	RefSeq	CDS	767385	768074	.	+	0	ID=cds689;Parent=gene709;Dbxref=Genbank:NP_733512.1,GeneID:1096146;Name=NP_733512.1;Note=3SC5B7.01%2C conserved hypothetical protein (fragment)%2C len: >151 aa%3B similar to TR:Q9SA67 (EMBL:AC006550) Arabidopsis thaliana F10O3 protein%2C 270 aa%3B fasta scores: opt: 219 z-score: 240.7 E(): 7.1e-06%3B 30.4%25 identity in 125 aa overlap~SCF42.33%2C unknown%2C partial CDS%2C len: > 117 aa. Similar to a protein of undefined function from Schizosaccharomyces pombe (Fission yeast) TR:CAB61463(EMBL:AL133156) (235 aa)%2C fasta scores opt: 241 z-score: 282.8 E(): 2.3e-08 37.0%25 identity in 119 aa overlap and Escherichia coli SW:YGGC_ECOLI(EMBL:X14436) (237 aa)%2C fasta scores opt: 184 z-score: 219.2 E(): 8.1e-05 36.4%25 identity in 99 aa overlap. Contains a Prosite Hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=frcK;product=fructose transport system kinase;protein_id=NP_733512.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	767466	767489	.	+	.	ID=id801;Dbxref=GeneID:1096146;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=frcK
NC_003888.3	RefSeq	ribosome_entry_site	768420	768423	.	+	.	ID=id802;gbkey=RBS
NC_003888.3	RefSeq	gene	768426	769367	.	+	.	ID=gene710;Dbxref=GeneID:1096147;Name=3SC5B7.02;gbkey=Gene;gene=3SC5B7.02;gene_biotype=protein_coding;gene_synonym=3SC5B7.02;locus_tag=SCO0724
NC_003888.3	RefSeq	CDS	768426	769367	.	+	0	ID=cds690;Parent=gene710;Dbxref=Genbank:NP_625028.1,GeneID:1096147;Name=NP_625028.1;Note=3SC5B7.02%2C probable transcriptional regulator%2C len: 313 aa%3B similar to TR:Q9KZ73 (EMBL:AL354048) Streptomyces coelicolor  transcriptional regulator SCE25.16c%2C 289 aa%3B fasta scores: opt: 721 z-score: 810.2 E(): 0%3B 43.9%25 identity in 289 aa overlap and to SW:HEXR_PSEAE (EMBL:AF029673) Pseudomonas aeruginosa hex regulon repressor HexR%2C 285 aa%3B fasta scores: opt: 167 z-score: 194.4 E(): 0.0027%3B 26.8%25 identity in 224 aa overlap. Contains a possible coiled-coil region at approx. residues 125..147 and a possible helix-turn-helix motif at residues 69..90 (+5.16 SD);gbkey=CDS;gene=3SC5B7.02;product=transcriptional regulator;protein_id=NP_625028.1;transl_table=11
NC_003888.3	RefSeq	gene	769688	770065	.	+	.	ID=gene711;Dbxref=GeneID:1096148;Name=3SC5B7.03;gbkey=Gene;gene=3SC5B7.03;gene_biotype=protein_coding;gene_synonym=3SC5B7.03;locus_tag=SCO0725
NC_003888.3	RefSeq	CDS	769688	770065	.	+	0	ID=cds691;Parent=gene711;Dbxref=Genbank:NP_625029.1,GeneID:1096148;Name=NP_625029.1;Note=3SC5B7.03%2C unknown%2C len: 125 aa;gbkey=CDS;gene=3SC5B7.03;product=hypothetical protein;protein_id=NP_625029.1;transl_table=11
NC_003888.3	RefSeq	gene	770144	770632	.	-	.	ID=gene712;Dbxref=GeneID:1096149;Name=3SC5B7.04c;gbkey=Gene;gene=3SC5B7.04c;gene_biotype=protein_coding;gene_synonym=3SC5B7.04c;locus_tag=SCO0726
NC_003888.3	RefSeq	CDS	770144	770632	.	-	0	ID=cds692;Parent=gene712;Dbxref=Genbank:NP_625030.1,GeneID:1096149;Name=NP_625030.1;Note=3SC5B7.04c%2C possible oxidoreductase%2C len: 162 aa%3B similar to TR:Q9K416 (EMBL:AL359779) Streptomyces coelicolor  flavin-dependent reductase SCG22.29c%2C 169 aa%3B fasta scores: opt: 184 z-score: 248.1 E(): 2.7e-06%3B 34.1%25 identity in 132 aa overlap. Contains Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain;gbkey=CDS;gene=3SC5B7.04c;product=oxidoreductase;protein_id=NP_625030.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	770165	770611	.	-	.	ID=id803;Dbxref=GeneID:1096149;Note=Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain%2C score 82.60%2C E-value 8.1e-21;gbkey=misc_feature;gene=3SC5B7.04c
NC_003888.3	RefSeq	gene	770665	771588	.	-	.	ID=gene713;Dbxref=GeneID:1096150;Name=3SC5B7.05c;gbkey=Gene;gene=3SC5B7.05c;gene_biotype=protein_coding;gene_synonym=3SC5B7.05c;locus_tag=SCO0727
NC_003888.3	RefSeq	CDS	770665	771588	.	-	0	ID=cds693;Parent=gene713;Dbxref=Genbank:NP_625031.1,GeneID:1096150;Name=NP_625031.1;Note=3SC5B7.05c%2C unknown%2C len: 307 aa;gbkey=CDS;gene=3SC5B7.05c;product=hypothetical protein;protein_id=NP_625031.1;transl_table=11
NC_003888.3	RefSeq	gene	771628	772362	.	+	.	ID=gene714;Dbxref=GeneID:1096151;Name=3SC5B7.06;gbkey=Gene;gene=3SC5B7.06;gene_biotype=protein_coding;gene_synonym=3SC5B7.06;locus_tag=SCO0728
NC_003888.3	RefSeq	CDS	771628	772362	.	+	0	ID=cds694;Parent=gene714;Dbxref=Genbank:NP_625032.1,GeneID:1096151;Name=NP_625032.1;Note=3SC5B7.06%2C probable regulatory protein%2C len: 244 aa%3B similar to TR:Q9XDF0 (EMBL:AF074603) Streptomyces griseus  transcriptional repressor NonG%2C 242 aa%3B fasta scores: opt: 885 z-score: 1073.4 E(): 0%3B 64.1%25 identity in 237 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and match to Prosite entry PS01081 Bacterial regulatory proteins%2C tetR family signature;gbkey=CDS;gene=3SC5B7.06;product=regulatory protein;protein_id=NP_625032.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	771706	771837	.	+	.	ID=id804;Dbxref=GeneID:1096151;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 65.30%2C E-value 1.3e-15;gbkey=misc_feature;gene=3SC5B7.06
NC_003888.3	RefSeq	sequence_feature	771742	771834	.	+	.	ID=id805;Dbxref=GeneID:1096151;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature;gbkey=misc_feature;gene=3SC5B7.06
NC_003888.3	RefSeq	ribosome_entry_site	772531	772534	.	+	.	ID=id806;gbkey=RBS
NC_003888.3	RefSeq	gene	772544	772966	.	+	.	ID=gene715;Dbxref=GeneID:1096152;Name=3SC5B7.07;gbkey=Gene;gene=3SC5B7.07;gene_biotype=protein_coding;gene_synonym=3SC5B7.07;locus_tag=SCO0729
NC_003888.3	RefSeq	CDS	772544	772966	.	+	0	ID=cds695;Parent=gene715;Dbxref=Genbank:NP_625033.1,GeneID:1096152;Name=NP_625033.1;Note=3SC5B7.07%2C conserved hypothetical protein%2C len: 140 aa%3B similar to TR:O27449 (EMBL:AE000902) Methanobacterium thermoautotrophicum conserved protein MTH1398%2C 133 aa%3B fasta scores: opt: 122 z-score: 167.4 E(): 0.085%3B 26.7%25 identity in 116 aa overlap;gbkey=CDS;gene=3SC5B7.07;product=hypothetical protein;protein_id=NP_625033.1;transl_table=11
NC_003888.3	RefSeq	gene	772974	773435	.	-	.	ID=gene716;Dbxref=GeneID:1096153;Name=3SC5B7.08c;gbkey=Gene;gene=3SC5B7.08c;gene_biotype=protein_coding;gene_synonym=3SC5B7.08c;locus_tag=SCO0730
NC_003888.3	RefSeq	CDS	772974	773435	.	-	0	ID=cds696;Parent=gene716;Dbxref=Genbank:NP_625034.1,GeneID:1096153;Name=NP_625034.1;Note=3SC5B7.08c%2C conserved hypothetical protein%2C len: 153 aa%3B similar to TR:O86340 (EMBL:Z97984) Mycobacterium tuberculosis hypothetical 14.8 kDa protein MTV019.02c%2C 134 aa%3B fasta scores: opt: 309 z-score: 388.9 E(): 3.9e-14%3B 39.0%25 identity in 123 aa overlap;gbkey=CDS;gene=3SC5B7.08c;product=hypothetical protein;protein_id=NP_625034.1;transl_table=11
NC_003888.3	RefSeq	gene	773432	774613	.	-	.	ID=gene717;Dbxref=GeneID:1096154;Name=3SC5B7.09c;gbkey=Gene;gene=3SC5B7.09c;gene_biotype=protein_coding;gene_synonym=3SC5B7.09c;locus_tag=SCO0731
NC_003888.3	RefSeq	CDS	773432	774613	.	-	0	ID=cds697;Parent=gene717;Dbxref=Genbank:NP_625035.1,GeneID:1096154;Name=NP_625035.1;Note=3SC5B7.09c%2C probable transferase%2C len: 444 aa%3B similar to SW:MALY_ECOLI (EMBL:M60722) Escherichia coli aminotransferase MalY protein%2C 390 aa%3B fasta scores: opt: 522 z-score: 589.7 E(): 2.5e-25%3B 30.8%25 identity in 370 aa overlap;gbkey=CDS;gene=3SC5B7.09c;product=transferase;protein_id=NP_625035.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	774754	774757	.	+	.	ID=id807;gbkey=RBS
NC_003888.3	RefSeq	gene	774765	776129	.	+	.	ID=gene718;Dbxref=GeneID:1096155;Name=3SC5B7.10;gbkey=Gene;gene=3SC5B7.10;gene_biotype=protein_coding;gene_synonym=3SC5B7.10;locus_tag=SCO0732
NC_003888.3	RefSeq	CDS	774765	776129	.	+	0	ID=cds698;Parent=gene718;Dbxref=Genbank:NP_625036.1,GeneID:1096155;Name=NP_625036.1;Note=3SC5B7.10%2C probable  protease%2C len: 454 aa%3B similar to SW:PRTD_STRGR (EMBL:L29019) Streptomyces griseus serine protease D precursor (EC 3.4.21.-) SprD%2C 392 aa%3B fasta scores: opt: 964 z-score: 909.8 E(): 0%3B 45.4%25 identity in 366 aa overlap. Contains Pfam match to entry PF00089 trypsin%2C Trypsin and match to Prosite entry PS00134 Serine proteases%2C trypsin family%2C histidine active site and PS00135 Serine proteases%2C trypsin family%2C serine active site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=3SC5B7.10;product=protease;protein_id=NP_625036.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	775284	775838	.	+	.	ID=id808;Dbxref=GeneID:1096155;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 48.30%2C E-value 1.7e-14;gbkey=misc_feature;gene=3SC5B7.10
NC_003888.3	RefSeq	sequence_feature	775368	775385	.	+	.	ID=id809;Dbxref=GeneID:1096155;Note=PS00134 Serine proteases%2C trypsin family%2C histidine active site;gbkey=misc_feature;gene=3SC5B7.10
NC_003888.3	RefSeq	sequence_feature	775701	775736	.	+	.	ID=id810;Dbxref=GeneID:1096155;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=misc_feature;gene=3SC5B7.10
NC_003888.3	RefSeq	gene	776203	776388	.	-	.	ID=gene719;Dbxref=GeneID:1096156;Name=3SC5B7.11c;gbkey=Gene;gene=3SC5B7.11c;gene_biotype=protein_coding;gene_synonym=3SC5B7.11c;locus_tag=SCO0733
NC_003888.3	RefSeq	CDS	776203	776388	.	-	0	ID=cds699;Parent=gene719;Dbxref=Genbank:NP_625037.1,GeneID:1096156;Name=NP_625037.1;Note=3SC5B7.11c%2C hypothetical protein%2C len: 61 aa%3B similar to TR:Q9K3Z9 (EMBL:AL359949) Streptomyces coelicolor hypothetical 6.5 kDa protein 2SCG61.16%2C 59 aa%3B fasta scores: opt: 196 z-score: 304.8 E(): 1.9e-09%3B 59.3%25 identity in 54 aa overlap;gbkey=CDS;gene=3SC5B7.11c;product=hypothetical protein;protein_id=NP_625037.1;transl_table=11
NC_003888.3	RefSeq	gene	776554	777828	.	-	.	ID=gene720;Dbxref=GeneID:1096157;Name=3SC5B7.12c;gbkey=Gene;gene=3SC5B7.12c;gene_biotype=protein_coding;gene_synonym=3SC5B7.12c;locus_tag=SCO0734
NC_003888.3	RefSeq	CDS	776554	777828	.	-	0	ID=cds700;Parent=gene720;Dbxref=Genbank:NP_625038.1,GeneID:1096157;Name=NP_625038.1;Note=3SC5B7.12c%2C probable transcriptional repressor%2C len: 424 aa%3B similar to SW:MLC_ECOLI (EMBL:D32222) Escherichia coli transcriptional regulator Mlc protein%2C 406 aa%3B fasta scores: opt: 387 z-score: 414.7 E(): 1.4e-15%3B 24.1%25 identity in 344 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family and possible helix-turn-helix motif at residues 64..85 (+6.19 SD);gbkey=CDS;gene=3SC5B7.12c;product=transcriptional repressor;protein_id=NP_625038.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	777037	777453	.	-	.	ID=id811;Dbxref=GeneID:1096157;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 55.90%2C E-value 1.5e-15;gbkey=misc_feature;gene=3SC5B7.12c
NC_003888.3	RefSeq	gene	777895	779097	.	+	.	ID=gene721;Dbxref=GeneID:1096158;Name=3SC5B7.13;gbkey=Gene;gene=3SC5B7.13;gene_biotype=protein_coding;gene_synonym=3SC5B7.13;locus_tag=SCO0735
NC_003888.3	RefSeq	CDS	777895	779097	.	+	0	ID=cds701;Parent=gene721;Dbxref=Genbank:NP_625039.1,GeneID:1096158;Name=NP_625039.1;Note=3SC5B7.13%2C possible oxidoreductase%2C len: 400 aa%3B low similarity to TR:Q9KDG5 (EMBL:AP001511) Bacillus halodurans NADH-dependent dehydrogenase BH1248%2C 340 aa%3B fasta scores: opt: 243 z-score: 286.8 E(): 1.9e-08%3B 24.8%25 identity in 242 aa overlap. Contains Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family;gbkey=CDS;gene=3SC5B7.13;product=oxidoreductase;protein_id=NP_625039.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	777901	778635	.	+	.	ID=id812;Dbxref=GeneID:1096158;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 79.50%2C E-value 6.8e-20;gbkey=misc_feature;gene=3SC5B7.13
NC_003888.3	RefSeq	gene	779131	779826	.	-	.	ID=gene722;Dbxref=GeneID:1096159;Name=3SC5B7.14c;gbkey=Gene;gene=3SC5B7.14c;gene_biotype=protein_coding;gene_synonym=3SC5B7.14c;locus_tag=SCO0736
NC_003888.3	RefSeq	CDS	779131	779826	.	-	0	ID=cds702;Parent=gene722;Dbxref=Genbank:NP_625040.1,GeneID:1096159;Name=NP_625040.1;Note=3SC5B7.14c%2C possible hypothetical protein%2C len: 231 aa. Contains possible N-terminal region cleavable signal peptide sequence;gbkey=CDS;gene=3SC5B7.14c;product=hypothetical protein;protein_id=NP_625040.1;transl_table=11
NC_003888.3	RefSeq	gene	780012	780812	.	-	.	ID=gene723;Dbxref=GeneID:1096160;Name=3SC5B7.15c;gbkey=Gene;gene=3SC5B7.15c;gene_biotype=protein_coding;gene_synonym=3SC5B7.15c;locus_tag=SCO0737
NC_003888.3	RefSeq	CDS	780012	780812	.	-	0	ID=cds703;Parent=gene723;Dbxref=Genbank:NP_625041.1,GeneID:1096160;Name=NP_625041.1;gbkey=CDS;gene=3SC5B7.15c;product=oxidoreductase;protein_id=NP_625041.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	780081	780173	.	-	.	ID=id813;Dbxref=GeneID:1096160;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 57.30%2C E-value 1.2e-14;gbkey=misc_feature;gene=3SC5B7.15c
NC_003888.3	RefSeq	sequence_feature	780228	780785	.	-	.	ID=id814;Dbxref=GeneID:1096160;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 203.40%2C E-value 3.5e-57;gbkey=misc_feature;gene=3SC5B7.15c
NC_003888.3	RefSeq	gene	780863	781402	.	+	.	ID=gene724;Dbxref=GeneID:1096161;Name=3SC5B7.16;gbkey=Gene;gene=3SC5B7.16;gene_biotype=protein_coding;gene_synonym=3SC5B7.16;locus_tag=SCO0738
NC_003888.3	RefSeq	CDS	780863	781402	.	+	0	ID=cds704;Parent=gene724;Dbxref=Genbank:NP_625042.1,GeneID:1096161;Name=NP_625042.1;Note=3SC5B7.16%2C possible hypothetical protein%2C len: 179 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=3SC5B7.16;product=hypothetical protein;protein_id=NP_625042.1;transl_table=11
NC_003888.3	RefSeq	gene	781386	782312	.	-	.	ID=gene725;Dbxref=GeneID:1096162;Name=3SC5B7.17c;gbkey=Gene;gene=3SC5B7.17c;gene_biotype=protein_coding;gene_synonym=3SC5B7.17c;locus_tag=SCO0739
NC_003888.3	RefSeq	CDS	781386	782312	.	-	0	ID=cds705;Parent=gene725;Dbxref=Genbank:NP_625043.1,GeneID:1096162;Name=NP_625043.1;Note=3SC5B7.17c%2C possible oxidoreductase%2C len: 308 aa%3B highly similar to TR:O54118 (EMBL:AL021529) Streptomyces coelicolor  oxidoreductase SC10A5.27c%2C 326 aa%3B fasta scores: opt: 1123 z-score: 1316.4 E(): 0%3B 60.1%25 identity in 308 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=3SC5B7.17c;product=short chain dehydrogenase;protein_id=NP_625043.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	781671	782279	.	-	.	ID=id815;Dbxref=GeneID:1096162;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 32.40%2C E-value 9.9e-08;gbkey=misc_feature;gene=3SC5B7.17c
NC_003888.3	RefSeq	sequence_feature	781853	786097	.	+	.	ID=id816;Note=previously sequenced DNA fragment. EMBL:AB019513 Streptomyces coelicolor genes for alcohol dehydrogenase and ABC transporter%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	782467	783096	.	-	.	ID=gene726;Dbxref=GeneID:1096163;Name=3SC5B7.18c;gbkey=Gene;gene=3SC5B7.18c;gene_biotype=protein_coding;gene_synonym=3SC5B7.18c;locus_tag=SCO0740
NC_003888.3	RefSeq	CDS	782467	783096	.	-	0	ID=cds706;Parent=gene726;Dbxref=Genbank:NP_625044.1,GeneID:1096163;Name=NP_625044.1;Note=3SC5B7.18c%2C probable hydrolase%2C len: 209 aa%3B identical to previously sequenced TR:Q9ZNB2 (EMBL:AB019513) Streptomyces coelicolor similar to Mycobacterium Tuberculosis hypothetical protein RV2260%2C 209 aa and similar to SW:GL2M_ARATH (EMBL:U90928) Arabidopsis thaliana hydroxyacylglutathione hydrolase%2C mitochondrial precursor (EC 3.1.2.6) Glx2-1%2C 331 aa%3B fasta scores: opt: 230 z-score: 271.1 E(): 1.4e-07%3B 30.1%25 identity in 173 aa overlap. Contains Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily;gbkey=CDS;gene=3SC5B7.18c;product=hydrolase;protein_id=NP_625044.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	782533	783039	.	-	.	ID=id817;Dbxref=GeneID:1096163;Note=Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily%2C score 154.70%2C E-value 1.6e-42;gbkey=misc_feature;gene=3SC5B7.18c
NC_003888.3	RefSeq	gene	783096	784184	.	-	.	ID=gene727;Dbxref=GeneID:1096164;Name=3SC5B7.19c;gbkey=Gene;gene=3SC5B7.19c;gene_biotype=protein_coding;gene_synonym=3SC5B7.19c;locus_tag=SCO0741
NC_003888.3	RefSeq	CDS	783096	784184	.	-	0	ID=cds707;Parent=gene727;Dbxref=Genbank:NP_625045.1,GeneID:1096164;Name=NP_625045.1;Note=3SC5B7.19c%2C probable oxidoreductase%2C len: 362 aa%3B highly similar to SW:FADH_AMYME Amycolatopsis methanolica NAD/mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.-) FadH%2C 360 aa%3B fasta scores: opt: 1833 z-score: 1972.8 E(): 0%3B 74.4%25 identity in 359 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and matches to Prosite entries PS00190 Cytochrome c family heme-binding site signature%2C PS00059 Zinc-containing alcohol dehydrogenases signature and PS00435 Peroxidases proximal heme-ligand signature;gbkey=CDS;gene=3SC5B7.19c;product=oxidoreductase;protein_id=NP_625045.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	783099	784139	.	-	.	ID=id818;Dbxref=GeneID:1096164;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 346.00%2C E-value 4.1e-100;gbkey=misc_feature;gene=3SC5B7.19c
NC_003888.3	RefSeq	sequence_feature	783495	783527	.	-	.	ID=id819;Dbxref=GeneID:1096164;Note=PS00435 Peroxidases proximal heme-ligand signature;gbkey=misc_feature;gene=3SC5B7.19c
NC_003888.3	RefSeq	sequence_feature	783957	784001	.	-	.	ID=id820;Dbxref=GeneID:1096164;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=3SC5B7.19c
NC_003888.3	RefSeq	sequence_feature	784053	784070	.	-	.	ID=id821;Dbxref=GeneID:1096164;Note=PS00190 Cytochrome c family heme-binding site signature;gbkey=misc_feature;gene=3SC5B7.19c
NC_003888.3	RefSeq	ribosome_entry_site	784352	784357	.	+	.	ID=id822;gbkey=RBS
NC_003888.3	RefSeq	gene	784362	786116	.	+	.	ID=gene728;Dbxref=GeneID:1096165;Name=3SC5B7.20;gbkey=Gene;gene=3SC5B7.20;gene_biotype=protein_coding;gene_synonym=3SC5B7.20,SCF81.01;locus_tag=SCO0742
NC_003888.3	RefSeq	CDS	784362	786116	.	+	0	ID=cds708;Parent=gene728;Dbxref=Genbank:NP_733513.1,GeneID:1096165;Name=NP_733513.1;Note=SCF81.01%2C ABC transporter (partial CDS)%2C len: >38 aa%3B identical to C-terminal region of previously sequenced TR:Q9ZNB0 (EMBL:AB019513) Streptomyces coelicolor ABC transporter%2C 584 aa~3SC5B7.20%2C ABC transporter ATP-binding protein (fragment)%2C len: >578 aa%3B identical to previously sequenced TR:Q9ZNB0 (EMBL:AB019513) Streptomyces coelicolor ABC transporter%2C 584 aa. Contains Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region and PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=3SC5B7.20;product=ABC transporter;protein_id=NP_733513.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	784440	785246	.	+	.	ID=id823;Dbxref=GeneID:1096165;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 121.80%2C E-value 1.3e-32;gbkey=misc_feature;gene=3SC5B7.20
NC_003888.3	RefSeq	sequence_feature	785466	786020	.	+	.	ID=id824;Dbxref=GeneID:1096165;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 199.70%2C E-value 4.5e-56;gbkey=misc_feature;gene=3SC5B7.20
NC_003888.3	RefSeq	sequence_feature	785487	785510	.	+	.	ID=id825;Dbxref=GeneID:1096165;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=3SC5B7.20
NC_003888.3	RefSeq	sequence_feature	785799	785843	.	+	.	ID=id826;Dbxref=GeneID:1096165;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=3SC5B7.20
NC_003888.3	RefSeq	gene	786125	786409	.	-	.	ID=gene729;Dbxref=GeneID:1096166;Name=SCF81.02c;gbkey=Gene;gene=SCF81.02c;gene_biotype=protein_coding;gene_synonym=SCF81.02c;locus_tag=SCO0743
NC_003888.3	RefSeq	CDS	786125	786409	.	-	0	ID=cds709;Parent=gene729;Dbxref=Genbank:NP_625046.1,GeneID:1096166;Name=NP_625046.1;Note=SCF81.02c%2C hypothetical protein%2C len: 94 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCF81.02c;product=hypothetical protein;protein_id=NP_625046.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	786581	786585	.	+	.	ID=id827;gbkey=RBS
NC_003888.3	RefSeq	gene	786591	786956	.	+	.	ID=gene730;Dbxref=GeneID:1096167;Name=SCF81.03;gbkey=Gene;gene=SCF81.03;gene_biotype=protein_coding;gene_synonym=SCF81.03;locus_tag=SCO0744
NC_003888.3	RefSeq	CDS	786591	786956	.	+	0	ID=cds710;Parent=gene730;Dbxref=Genbank:NP_625047.1,GeneID:1096167;Name=NP_625047.1;Note=SCF81.03%2C unknown%2C len: 121 aa%3B similar to TR:Q98BX4 (EMBL:AP003006) MLL5389 protein from Rhizobium loti (Mesorhizobium loti) (124 aa) fasta scores%3B opt: 363%2C Z-score: 452.3%2C E(): 1.5e-17%2C 43.750%25 identity (43.750%25 ungapped) in 112 aa overlap.;gbkey=CDS;gene=SCF81.03;product=hypothetical protein;protein_id=NP_625047.1;transl_table=11
NC_003888.3	RefSeq	gene	786984	787643	.	-	.	ID=gene731;Dbxref=GeneID:1096168;Name=SCF81.04c;gbkey=Gene;gene=SCF81.04c;gene_biotype=protein_coding;gene_synonym=SCF81.04c;locus_tag=SCO0745
NC_003888.3	RefSeq	CDS	786984	787643	.	-	0	ID=cds711;Parent=gene731;Dbxref=Genbank:NP_625048.1,GeneID:1096168;Name=NP_625048.1;Note=SCF81.04c%2C possible tetR-family transcriptional regulator%2C len: 219 aa%3B similar to various Streptomyces transcriptional regulators%2C e.g. TR:Q9ZBK0 (EMBL:AL035161) Streptomyces coelicolor  transcriptional regulator SC9C7.10c%2C 272 aa%3B fasta scores: opt: 189 z-score: 243.3 E(): 3.5e-06%3B 29.8%25 identity in 218 aa overlap. Contains match to Pfam entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SCF81.04c;product=TetR family transcriptional regulator;protein_id=NP_625048.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	787419	787562	.	-	.	ID=id828;Dbxref=GeneID:1096168;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 18.40%2C E-value 0.0023;gbkey=misc_feature;gene=SCF81.04c
NC_003888.3	RefSeq	ribosome_entry_site	787650	787654	.	-	.	ID=id829;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	787830	787834	.	+	.	ID=id830;gbkey=RBS
NC_003888.3	RefSeq	gene	787843	789096	.	+	.	ID=gene732;Dbxref=GeneID:1096169;Name=SCF81.05;gbkey=Gene;gene=SCF81.05;gene_biotype=protein_coding;gene_synonym=SCF81.05;locus_tag=SCO0746
NC_003888.3	RefSeq	CDS	787843	789096	.	+	0	ID=cds712;Parent=gene732;Dbxref=Genbank:NP_625049.1,GeneID:1096169;Name=NP_625049.1;Note=SCF81.05%2C possible Ser/Thr protein kinase (hypothetical protein)%2C len: 462 aa%3B low similarity to C-terminus SW:PKWA_THECU (EMBL:U23820) Thermomonospora curvata  Ser/Thr protein kinase PkwA (EC 2.7.1.-)%2C 742 aa%3B fasta scores: opt: 157 z-score: 167.3 E(): 0.06%3B 23.6%25 identity in 309 aa overlap. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCF81.05;product=Ser/Thr protein kinase;protein_id=NP_625049.1;transl_table=11
NC_003888.3	RefSeq	gene	789337	789837	.	-	.	ID=gene733;Dbxref=GeneID:1096170;Name=SCF81.06c;gbkey=Gene;gene=SCF81.06c;gene_biotype=protein_coding;gene_synonym=SCF81.06c;locus_tag=SCO0747
NC_003888.3	RefSeq	CDS	789337	789837	.	-	0	ID=cds713;Parent=gene733;Dbxref=Genbank:NP_625050.1,GeneID:1096170;Name=NP_625050.1;Note=SCF81.06c%2C hypothetical protein%2C len: 166 aa%3B similar to various hypothetical proteins%2C e.g. TR:AAD36153 (EMBL:AE001768) Thermotoga maritima conserved hypothetical protein TM1076%2C 157 aa%3B fasta scores: opt: 293 z-score: 385.9 E(): 4e-14%3B 39.1%25 identity in 133 aa overlap and to TR:Q9CCZ0 (EMBL:AL583926) Mycobacterium leprae conserved hypothetical protein ML 2654%2C 165 aa%3B fasta scores: opt: 642 Z-score: 785.7 E(): 4e-36%3B 60.248%25 identity in 161 aa overlap;gbkey=CDS;gene=SCF81.06c;product=hypothetical protein;protein_id=NP_625050.1;transl_table=11
NC_003888.3	RefSeq	gene	789960	790541	.	+	.	ID=gene734;Dbxref=GeneID:1096171;Name=SCF81.07;gbkey=Gene;gene=SCF81.07;gene_biotype=protein_coding;gene_synonym=SCF81.07;locus_tag=SCO0748
NC_003888.3	RefSeq	CDS	789960	790541	.	+	0	ID=cds714;Parent=gene734;Dbxref=Genbank:NP_625051.1,GeneID:1096171;Name=NP_625051.1;Note=SCF81.07%2C possible hydrolase%2C len: 193 aa%3B similar to TR:P94573 (EMBL:Z82987) Bacillus subtilis hypothetical 21.1KD protein%2C 189 aa%3B fasta scores: opt: 504 z-score: 582.8 E(): 4.4e-25%3B 48.4%25 identity in 190 aa overlap and to SW:ENTB_ECOLI (EMBL:M24148) Escherichia coli isochorismatase (EC 3.3.2.1) (2%2C3 dihydro-2%2C3 dihydroxybenzoate synthase) EntB%2C 285 aa%3B fasta scores: opt: 205 z-score: 242.1 E(): 4.1e-06%3B 26.8%25 identity in 183 aa overlap. Contains match to Pfam entry PF00857 Isochorismatase%2C Isochorismatase family;gbkey=CDS;gene=SCF81.07;product=hydrolase;protein_id=NP_625051.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	789990	790460	.	+	.	ID=id831;Dbxref=GeneID:1096171;Note=Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family%2C score 149.90%2C E-value 4.4e-41;gbkey=misc_feature;gene=SCF81.07
NC_003888.3	RefSeq	gene	790561	791535	.	-	.	ID=gene735;Dbxref=GeneID:1096172;Name=SCF81.08c;gbkey=Gene;gene=SCF81.08c;gene_biotype=protein_coding;gene_synonym=SCF81.08c;locus_tag=SCO0749
NC_003888.3	RefSeq	CDS	790561	791535	.	-	0	ID=cds715;Parent=gene735;Dbxref=Genbank:NP_625052.1,GeneID:1096172;Name=NP_625052.1;Note=SCF81.08c%2C probable dehydratase%2C len: 324 aa%3B higly similar to TR:AAD55454 (EMBL:AF055579) Streptomyces antibioticus dehydratase OleE%2C 335 aa%3B fasta scores: opt: 1571 z-score: 1848.7 E(): 0%3B 74.0%25 identity in 323 aa overlap and to SW:STRE_STRGR (EMBL:X62567) Streptomyces griseus DTDP-glucose 4%2C6-dehydratase (EC 4.2.1.46) StrE%2C 328 aa%3B fasta scores: opt: 1422 z-score: 1674.0 E(): 0%3B 68.6%25 identity in 318 aa overlap. Contains match to Pfam entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCF81.08c;product=dehydratase;protein_id=NP_625052.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	790603	791529	.	-	.	ID=id832;Dbxref=GeneID:1096172;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 525.10%2C E-value 5e-154;gbkey=misc_feature;gene=SCF81.08c
NC_003888.3	RefSeq	sequence_feature	791050	791136	.	-	.	ID=id833;Dbxref=GeneID:1096172;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCF81.08c
NC_003888.3	RefSeq	gene	791701	791880	.	-	.	ID=gene736;Dbxref=GeneID:1096173;Name=SCF81.09c;gbkey=Gene;gene=SCF81.09c;gene_biotype=protein_coding;gene_synonym=SCF81.09c;locus_tag=SCO0750
NC_003888.3	RefSeq	CDS	791701	791880	.	-	0	ID=cds716;Parent=gene736;Dbxref=Genbank:NP_625053.1,GeneID:1096173;Name=NP_625053.1;Note=SCF81.09c%2C unknown%2C len: 59 aa;gbkey=CDS;gene=SCF81.09c;product=hypothetical protein;protein_id=NP_625053.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	791891	791895	.	-	.	ID=id834;gbkey=RBS
NC_003888.3	RefSeq	gene	791981	794467	.	-	.	ID=gene737;Dbxref=GeneID:1096174;Name=SCF81.10c;gbkey=Gene;gene=SCF81.10c;gene_biotype=protein_coding;gene_synonym=SCF81.10c;locus_tag=SCO0751
NC_003888.3	RefSeq	CDS	791981	794467	.	-	0	ID=cds717;Parent=gene737;Dbxref=Genbank:NP_625054.1,GeneID:1096174;Name=NP_625054.1;Note=SCF81.10c%2C possible regulatory protein%2C len: 894 aa%3B similar to TR:Q9ZBJ0 (EMBL:AL035161) Streptomyces coelicolor conserved hypothetical protein SC9C7.20%2C 860 aa%3B fasta scores: opt: 663 z-score: 716.6 E(): 1.5e-32%3B 29.6%25 identity in 873 aa overlap and to TR:CAB44394 (EMBL:AL078610) Streptomyces coelicolor regulatory protein SCH35.33c%2C 422 aa%3B fasta scores: opt: 305 z-score: 312.4 E(): 5e-10%3B 33.3%25 identity in 258 aa overlap. Contains match to Pfam entry PF01590 GAF%2C GAF domain;gbkey=CDS;gene=SCF81.10c;product=regulatory protein;protein_id=NP_625054.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	793085	793528	.	-	.	ID=id835;Dbxref=GeneID:1096174;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 27.40%2C E-value 0.00034;gbkey=misc_feature;gene=SCF81.10c
NC_003888.3	RefSeq	gene	794689	796002	.	-	.	ID=gene738;Dbxref=GeneID:1096175;Name=salO;gbkey=Gene;gene=salO;gene_biotype=protein_coding;gene_synonym=salO,SCF81.11c;locus_tag=SCO0752
NC_003888.3	RefSeq	CDS	794689	796002	.	-	0	ID=cds718;Parent=gene738;Dbxref=Genbank:NP_625055.1,GeneID:1096175;Name=NP_625055.1;Note=SCF81.11c%2C salO%2C protease precursor%2C len: 437 aa%3B highly similar to but longer than TR:Q54395 (EMBL:D50081) Streptomyces lividans%2C SalO precursor%2C 354 aa%3B fasta scores: opt: 1713 z-score: 1480.6 E(): 0%3B 89.1%25 identity in 367 aa overlap%2C to SW:PRTD_STRGR (EMBL:L29019) Streptomyces griseus serine protease D precursor (EC 3.4.21.-) SgpD%2C 392 aa%3B fasta scores: opt: 1097 z-score: 952.8 E(): 0%3B 53.4%25 identity in 363 aa overlap and to Streptomyces coelicolor StI11.30c%2C 360 aa%3B fasta scores: opt: 1093 z-score: 833.4 E(): 0%3B 52.8%25 identity in 362 aa overlap. Contains match to Pfam entry PF00089 trypsin%2C Trypsin and two matches to Prosite entry PS00134 Serine proteases%2C trypsin family%2C histidine active site. Contains also possible N-terminal signal sequence peptide and degenerate repeat x6 GGA(G/D)AG;gbkey=CDS;gene=salO;product=protease;protein_id=NP_625055.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	794701	794889	.	-	.	ID=id836;Dbxref=GeneID:1096175;Note=Degenerate repeat x6 GGA(G/D)AG;gbkey=repeat_region;gene=salO
NC_003888.3	RefSeq	sequence_feature	794902	795456	.	-	.	ID=id837;Dbxref=GeneID:1096175;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 80.60%2C E-value 9.7e-25;gbkey=misc_feature;gene=salO
NC_003888.3	RefSeq	sequence_feature	795007	795042	.	-	.	ID=id838;Dbxref=GeneID:1096175;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=misc_feature;gene=salO
NC_003888.3	RefSeq	sequence_feature	795352	795369	.	-	.	ID=id839;Dbxref=GeneID:1096175;Note=PS00134 Serine proteases%2C trypsin family%2C histidine active site;gbkey=misc_feature;gene=salO
NC_003888.3	RefSeq	ribosome_entry_site	796012	796017	.	-	.	ID=id840;gbkey=RBS
NC_003888.3	RefSeq	gene	796584	796799	.	+	.	ID=gene739;Dbxref=GeneID:1096176;Name=SCF81.12;gbkey=Gene;gene=SCF81.12;gene_biotype=protein_coding;gene_synonym=SCF81.12;locus_tag=SCO0753
NC_003888.3	RefSeq	CDS	796584	796799	.	+	0	ID=cds719;Parent=gene739;Dbxref=Genbank:NP_625056.1,GeneID:1096176;Name=NP_625056.1;Note=SCF81.12%2C unknown%2C len: 71 aa;gbkey=CDS;gene=SCF81.12;product=hypothetical protein;protein_id=NP_625056.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	796961	796964	.	+	.	ID=id841;gbkey=RBS
NC_003888.3	RefSeq	gene	796977	797723	.	+	.	ID=gene740;Dbxref=GeneID:1096177;Name=SCF81.13;gbkey=Gene;gene=SCF81.13;gene_biotype=protein_coding;gene_synonym=SCF81.13;locus_tag=SCO0754
NC_003888.3	RefSeq	CDS	796977	797723	.	+	0	ID=cds720;Parent=gene740;Dbxref=Genbank:NP_625057.1,GeneID:1096177;Name=NP_625057.1;Note=SCF81.13%2C hypothetical protein%2C len: 268 aa. Contains possible N-teminal signal sequence peptide;gbkey=CDS;gene=SCF81.13;product=hypothetical protein;protein_id=NP_625057.1;transl_table=11
NC_003888.3	RefSeq	gene	797720	799942	.	+	.	ID=gene741;Dbxref=GeneID:1096178;Name=SCF81.14;gbkey=Gene;gene=SCF81.14;gene_biotype=protein_coding;gene_synonym=SCF81.14;locus_tag=SCO0755
NC_003888.3	RefSeq	CDS	797720	799942	.	+	0	ID=cds721;Parent=gene741;Dbxref=Genbank:NP_625058.1,GeneID:1096178;Name=NP_625058.1;Note=SCF81.14%2C possible ABC transporter%2C len: 740 aa%3B similar to SW: COMA_STRPN (EMBL:M36180) Streptococcus pneumoniae transport ATP-binding protein ComA%2C 717 aa%3B fasta scores: opt: 1035 z-score: 1141.5 E(): 0%3B 29.1%25 identity in 721 aa overlap. Contains two matches to Pfam entries PF00664 ABC_membrane%2C ABC transporter transmembrane region and PF00005 ABC_tran%2C ABC transporter and two to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCF81.14;product=ABC transporter;protein_id=NP_625058.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	798281	799093	.	+	.	ID=id842;Dbxref=GeneID:1096178;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 36.10%2C E-value 8e-07;gbkey=misc_feature;gene=SCF81.14
NC_003888.3	RefSeq	sequence_feature	799316	799864	.	+	.	ID=id843;Dbxref=GeneID:1096178;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 178.40%2C E-value 1.2e-49;gbkey=misc_feature;gene=SCF81.14
NC_003888.3	RefSeq	sequence_feature	799337	799360	.	+	.	ID=id844;Dbxref=GeneID:1096178;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF81.14
NC_003888.3	RefSeq	sequence_feature	799649	799693	.	+	.	ID=id845;Dbxref=GeneID:1096178;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF81.14
NC_003888.3	RefSeq	ribosome_entry_site	799933	799936	.	+	.	ID=id846;Dbxref=GeneID:1096178;gbkey=RBS;gene=SCF81.14
NC_003888.3	RefSeq	gene	799944	802766	.	+	.	ID=gene742;Dbxref=GeneID:1096179;Name=SCF81.15;gbkey=Gene;gene=SCF81.15;gene_biotype=protein_coding;gene_synonym=SCF81.15;locus_tag=SCO0756
NC_003888.3	RefSeq	CDS	799944	802766	.	+	0	ID=cds722;Parent=gene742;Dbxref=Genbank:NP_625059.1,GeneID:1096179;Name=NP_625059.1;Note=SCF81.15%2C possible ABC transporter%2C len: 940 aa%3B similar to TR:P74829 (EMBL:U51197) Sphingomonas sp. S88 hypothetical 79.4 KD protein AtrB%2C 728 aa%3B fasta scores: opt: 803 z-score: 870.4 E(): 0%3B 32.7%25 identity in 562 aa overlap and to SW:CYAB_BORPE (EMBL:X14199) Bordetella pertussis cyclolysin secretion ATP-binding protein CyaB%2C 712 aa%3B fasta scores: opt: 785 z-score: 851.0 E(): 0%3B 32.2%25 identity in 631 aa overlap. Contains two matches to Pfam entries PF00664 ABC_membrane%2C ABC transporter transmembrane region and PF00005 ABC_tran%2C ABC transporter and two to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCF81.15;product=ABC transporter;protein_id=NP_625059.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	801126	801926	.	+	.	ID=id847;Dbxref=GeneID:1096179;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 36.00%2C E-value 8.5e-07;gbkey=misc_feature;gene=SCF81.15
NC_003888.3	RefSeq	sequence_feature	802137	802679	.	+	.	ID=id848;Dbxref=GeneID:1096179;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 193.70%2C E-value 2.9e-54;gbkey=misc_feature;gene=SCF81.15
NC_003888.3	RefSeq	sequence_feature	802158	802181	.	+	.	ID=id849;Dbxref=GeneID:1096179;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF81.15
NC_003888.3	RefSeq	sequence_feature	802464	802508	.	+	.	ID=id850;Dbxref=GeneID:1096179;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF81.15
NC_003888.3	RefSeq	gene	802797	803807	.	+	.	ID=gene743;Dbxref=GeneID:1096180;Name=SCF81.16;gbkey=Gene;gene=SCF81.16;gene_biotype=protein_coding;gene_synonym=SCF81.16;locus_tag=SCO0757
NC_003888.3	RefSeq	CDS	802797	803807	.	+	0	ID=cds723;Parent=gene743;Dbxref=Genbank:NP_625060.1,GeneID:1096180;Name=NP_625060.1;Note=SCF81.16%2C possible phosphatase%2C len: 336 aa%3B low similarity to SW:PPX_ECOLI (EMBL:L06129) Escherichia coli exopolyphosphatase (EC 3.6.1.11) (metaphosphatase) Ppx%2C 512 aa%3B fasta scores: opt: 251 z-score: 287.5 E(): 1.2e-08%3B 24.8%25 identity in 303 aa overlap;gbkey=CDS;gene=SCF81.16;product=phosphatase;protein_id=NP_625060.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	803846	803850	.	+	.	ID=id851;gbkey=RBS
NC_003888.3	RefSeq	gene	803856	804035	.	+	.	ID=gene744;Dbxref=GeneID:1096181;Name=SCF81.17;gbkey=Gene;gene=SCF81.17;gene_biotype=protein_coding;gene_synonym=SCF81.17;locus_tag=SCO0758
NC_003888.3	RefSeq	CDS	803856	804035	.	+	0	ID=cds724;Parent=gene744;Dbxref=Genbank:NP_625061.1,GeneID:1096181;Name=NP_625061.1;Note=SCF81.17%2C unknown%2C len: 59 aa;gbkey=CDS;gene=SCF81.17;product=hypothetical protein;protein_id=NP_625061.1;transl_table=11
NC_003888.3	RefSeq	gene	804091	805122	.	+	.	ID=gene745;Dbxref=GeneID:1096182;Name=SCF81.18;gbkey=Gene;gene=SCF81.18;gene_biotype=protein_coding;gene_synonym=SCF81.18;locus_tag=SCO0759
NC_003888.3	RefSeq	CDS	804091	805122	.	+	0	ID=cds725;Parent=gene745;Dbxref=Genbank:NP_625062.1,GeneID:1096182;Name=NP_625062.1;Note=SCF81.18%2C unknown%2C len: 343 aa;gbkey=CDS;gene=SCF81.18;product=hypothetical protein;protein_id=NP_625062.1;transl_table=11
NC_003888.3	RefSeq	gene	805135	805797	.	+	.	ID=gene746;Dbxref=GeneID:1096183;Name=SCF81.19;gbkey=Gene;gene=SCF81.19;gene_biotype=protein_coding;gene_synonym=SCF81.19;locus_tag=SCO0760
NC_003888.3	RefSeq	CDS	805135	805797	.	+	0	ID=cds726;Parent=gene746;Dbxref=Genbank:NP_625063.1,GeneID:1096183;Name=NP_625063.1;Note=SCF81.19%2C probable methyltransferase%2C len: 220 aa%3B similar to TR:O27384 (EMBL:AE000896) Methanobacterium thermoautotrophicum methyltransferase related protein MTH1329%2C 196 aa%3B fasta scores: opt: 454 z-score: 525.3 E(): 6.9e-22%3B 44.2%25 identity in 190 aa overlap and to TR:Q53742 (EMBL:X92429) Streptomyces lipmanii (Streptomyces alboniger) N-methyl-transferase Pur5%2C 228 aa%3B fasta scores: opt: 228 z-score: 268.6 E(): 1.4e-07%3B 33.3%25 identity in 192 aa overlap. Contains match to Prosite entry PS00092 N-6 Adenine-specific DNA methylases signature;gbkey=CDS;gene=SCF81.19;product=methyltransferase;protein_id=NP_625063.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	805435	805455	.	+	.	ID=id852;Dbxref=GeneID:1096183;Note=PS00092 N-6 Adenine-specific DNA methylases signature;gbkey=misc_feature;gene=SCF81.19
NC_003888.3	RefSeq	gene	805859	806038	.	+	.	ID=gene747;Dbxref=GeneID:1096184;Name=SCF81.20;gbkey=Gene;gene=SCF81.20;gene_biotype=protein_coding;gene_synonym=SCF81.20;locus_tag=SCO0761
NC_003888.3	RefSeq	CDS	805859	806038	.	+	0	ID=cds727;Parent=gene747;Dbxref=Genbank:NP_625064.1,GeneID:1096184;Name=NP_625064.1;Note=SCF81.20%2C unknown%2C len: 59 aa;gbkey=CDS;gene=SCF81.20;product=hypothetical protein;protein_id=NP_625064.1;transl_table=11
NC_003888.3	RefSeq	gene	806172	806606	.	-	.	ID=gene748;Dbxref=GeneID:1096185;Name=SCF81.21c;gbkey=Gene;gene=SCF81.21c;gene_biotype=protein_coding;gene_synonym=SCF81.21c,sti1;locus_tag=SCO0762
NC_003888.3	RefSeq	CDS	806172	806606	.	-	0	ID=cds728;Parent=gene748;Dbxref=Genbank:NP_625065.1,GeneID:1096185;Name=NP_625065.1;Note=subtilase-type%3B inhibits bacterial serine proteases;gbkey=CDS;gene=SCF81.21c;product=protease inhibitor protein;protein_id=NP_625065.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	806214	806498	.	-	.	ID=id853;Dbxref=GeneID:1096185;Note=Pfam match to entry PF00720 SSI%2C Subtilisin inhibitor-like%2C score 222.80%2C E-value 5.2e-63;gbkey=misc_feature;gene=SCF81.21c
NC_003888.3	RefSeq	sequence_feature	806355	806411	.	-	.	ID=id854;Dbxref=GeneID:1096185;Note=PS00999 Streptomyces subtilisin-type inhibitors signature;gbkey=misc_feature;gene=SCF81.21c
NC_003888.3	RefSeq	ribosome_entry_site	806952	806955	.	+	.	ID=id855;gbkey=RBS
NC_003888.3	RefSeq	gene	806966	808135	.	+	.	ID=gene749;Dbxref=GeneID:1096186;Name=SCF81.22;gbkey=Gene;gene=SCF81.22;gene_biotype=protein_coding;gene_synonym=SCF81.22;locus_tag=SCO0763
NC_003888.3	RefSeq	CDS	806966	808135	.	+	0	ID=cds729;Parent=gene749;Dbxref=Genbank:NP_625066.1,GeneID:1096186;Name=NP_625066.1;Note=SCF81.22%2C probable oxidoreductase%2C len: 535 aa%3B similar to SW:LA2M_MYCSM (EMBL:J05402) Mycobacterium smegmatis lactate 2-monooxygenase (EC 1.13.12.4) (lactate oxidase) La2M%2C 393 aa%3B fasta scores: opt: 1102 z-score: 1235.6 E(): 0%3B 44.6%25 identity in 379 aa overlap. Contains match to Pfam entry PF01070 FMN_dh%2C FMN-dependent dehydrogenase and to Prosite entry PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site;gbkey=CDS;gene=SCF81.22;product=oxidoreductase;protein_id=NP_625066.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	807068	808126	.	+	.	ID=id856;Dbxref=GeneID:1096186;Note=Pfam match to entry PF01070 FMN_dh%2C FMN-dependent dehydrogenase%2C score 451.60%2C E-value 6.8e-132;gbkey=misc_feature;gene=SCF81.22
NC_003888.3	RefSeq	sequence_feature	807809	807829	.	+	.	ID=id857;Dbxref=GeneID:1096186;Note=PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site;gbkey=misc_feature;gene=SCF81.22
NC_003888.3	RefSeq	gene	808206	809813	.	-	.	ID=gene750;Dbxref=GeneID:1096187;Name=SCF81.23c;gbkey=Gene;gene=SCF81.23c;gene_biotype=protein_coding;gene_synonym=SCF81.23c;locus_tag=SCO0764
NC_003888.3	RefSeq	CDS	808206	809813	.	-	0	ID=cds730;Parent=gene750;Dbxref=Genbank:NP_625067.1,GeneID:1096187;Name=NP_625067.1;Note=SCF81.23c%2C possible hydrolase%2C len: 536 aa%3B low similarity to SW:E13B_OERXA (EMBL:M60826) Oerskovia xanthineolytica glucan endo-1%2C3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) 548 aa%3B fasta scores: opt: 190 z-score: 208.5 E(): 0.00031%3B 28.3%25 identity in 166 aa overlap;gbkey=CDS;gene=SCF81.23c;product=hydrolase;protein_id=NP_625067.1;transl_table=11
NC_003888.3	RefSeq	gene	810172	812415	.	-	.	ID=gene751;Dbxref=GeneID:1096188;Name=cel1;gbkey=Gene;gene=cel1;gene_biotype=protein_coding;gene_synonym=cel1,SCF81.24c;locus_tag=SCO0765
NC_003888.3	RefSeq	CDS	810172	812415	.	-	0	ID=cds731;Parent=gene751;Dbxref=Genbank:NP_625068.1,GeneID:1096188;Name=NP_625068.1;Note=SCF81.24c%2C cel1%2C  endoglucanase%2C len: 747 aa%3B highly similar to SW:GUN1_STRRE (EMBL:X65616) Streptomyces reticulii cellulase 1 precursor (EC 3.2.1.4) (endoglucanase) (endo-1%2C4-beta-glucanase) (avicelase) Cel1%2C 746 aa%3B fasta scores: opt: 4213 z-score: 4621.9 E(): 0%3B 80.3%25 identity in 747 aa overlap. Contains two matches to Pfam entries PF00759 Glyco_hydro_9%2C Glycosyl hydrolase family 9 and to Prosite entry PS00698 Glycosyl hydrolases family 9 active sites signature 2. Also contains N-terminal region signal peptide sequence and a possible helix-turn-helix motif at residues 119..140 (+2.81 SD);gbkey=CDS;gene=cel1;product=endoglucanase;protein_id=NP_625068.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	810214	810270	.	-	.	ID=id858;Dbxref=GeneID:1096188;Note=PS00698 Glycosyl hydrolases family 9 active sites signature 2;gbkey=misc_feature;gene=cel1
NC_003888.3	RefSeq	sequence_feature	810427	810516	.	-	.	ID=id859;Dbxref=GeneID:1096188;Note=Pfam match to entry PF00759 Glyco_hydro_9%2C Glycosyl hydrolase family 9%2C score 14.20%2C E-value 0.0008;gbkey=misc_feature;gene=cel1
NC_003888.3	RefSeq	sequence_feature	811378	811470	.	-	.	ID=id860;Dbxref=GeneID:1096188;Note=Pfam match to entry PF00759 Glyco_hydro_9%2C Glycosyl hydrolase family 9%2C score 12.10%2C E-value 0.0035;gbkey=misc_feature;gene=cel1
NC_003888.3	RefSeq	ribosome_entry_site	812423	812426	.	-	.	ID=id861;gbkey=RBS
NC_003888.3	RefSeq	gene	812569	815655	.	-	.	ID=gene752;Dbxref=GeneID:1096189;Name=SCF81.25c;gbkey=Gene;gene=SCF81.25c;gene_biotype=protein_coding;gene_synonym=SCF81.25c;locus_tag=SCO0766
NC_003888.3	RefSeq	CDS	812569	815655	.	-	0	ID=cds732;Parent=gene752;Dbxref=Genbank:NP_625069.1,GeneID:1096189;Name=NP_625069.1;Note=SCF81.25c%2C possible  beta-galactosidase%2C len: 1028 aa%3B similar to SW:BGA2_ECOLI (EMBL:M64441) Escherichia coli evolved beta-galactosidase alpha-subunit (EC 3.2.1.23) (lactase) 1031 aa%3B fasta scores: opt: 482 z-score: 519.9 E(): 1.4e-21%3B 30.6%25 identity in 464 aa overlap. Contains N-terminal signal peptide sequence;gbkey=CDS;gene=SCF81.25c;product=beta-galactosidase;protein_id=NP_625069.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	815663	815666	.	-	.	ID=id862;gbkey=RBS
NC_003888.3	RefSeq	gene	815808	818315	.	+	.	ID=gene753;Dbxref=GeneID:1096190;Name=SCF81.26;gbkey=Gene;gene=SCF81.26;gene_biotype=protein_coding;gene_synonym=SCF81.26;locus_tag=SCO0767
NC_003888.3	RefSeq	CDS	815808	818315	.	+	0	ID=cds733;Parent=gene753;Dbxref=Genbank:NP_625070.1,GeneID:1096190;Name=NP_625070.1;Note=SCF81.26%2C hypothetical protein%2C len: 835 aa%3B similar to various Streptomyces hypothetical proteins%2C e.g. TR:Q9ZBJ0 (EMBL:AL035161) Streptomyces coelicolor conserved hypothetical protein SC9C7.20%2C 860 aa%3B fasta scores: opt: 1329 z-score: 1414.8 E(): 0%3B 36.8%25 identity in 835 aa overlap. Contains match to Pfam entry PF01590 GAF%2C GAF domain and two matches to Pfam entry PF00989 PAS%2C PAS domain;gbkey=CDS;gene=SCF81.26;product=hypothetical protein;protein_id=NP_625070.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	815979	816083	.	+	.	ID=id863;Dbxref=GeneID:1096190;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 17.40%2C E-value 0.0029;gbkey=misc_feature;gene=SCF81.26
NC_003888.3	RefSeq	sequence_feature	816276	816470	.	+	.	ID=id864;Dbxref=GeneID:1096190;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 20.20%2C E-value 0.00046;gbkey=misc_feature;gene=SCF81.26
NC_003888.3	RefSeq	sequence_feature	816636	817187	.	+	.	ID=id865;Dbxref=GeneID:1096190;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 29.30%2C E-value 9.1e-05;gbkey=misc_feature;gene=SCF81.26
NC_003888.3	RefSeq	ribosome_entry_site	818437	818440	.	+	.	ID=id866;gbkey=RBS
NC_003888.3	RefSeq	gene	818446	819111	.	+	.	ID=gene754;Dbxref=GeneID:1096191;Name=SCF81.27;gbkey=Gene;gene=SCF81.27;gene_biotype=protein_coding;gene_synonym=SCF81.27;locus_tag=SCO0768
NC_003888.3	RefSeq	CDS	818446	819111	.	+	0	ID=cds734;Parent=gene754;Dbxref=Genbank:NP_625071.1,GeneID:1096191;Name=NP_625071.1;Note=SCF81.27%2C possible lipoprotein%2C len: 221 aa. Contains N-terminal signal peptide sequence%2C and appropriately positioned Prosite entry PS00013 probable lipoprotein Prokaryotic membrane lipoprotein lipid attachment sit;gbkey=CDS;gene=SCF81.27;product=lipoprotein;protein_id=NP_625071.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	818494	818526	.	+	.	ID=id867;Dbxref=GeneID:1096191;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF81.27
NC_003888.3	RefSeq	gene	819148	820116	.	-	.	ID=gene755;Dbxref=GeneID:1096192;Name=3SCF60.01c;gbkey=Gene;gene=3SCF60.01c;gene_biotype=protein_coding;gene_synonym=3SCF60.01c,SCF81.28c;locus_tag=SCO0769
NC_003888.3	RefSeq	CDS	819148	820116	.	-	0	ID=cds735;Parent=gene755;Dbxref=Genbank:NP_733514.1,GeneID:1096192;Name=NP_733514.1;Note=3SCF60.01c%2C probable oxidoreductase (fragment)%2C len: >53 aa%3B similar to SW:YAJO_ECOLI (EMBL:AE000148) Escherichia coli hypothetical oxidoreductase in pgpA-ispA intergenic region YajO%2C 324 aa%3B fasta scores: opt: 250 z-score: 383.7 E(): 7.6e-14%3B 65.4%25 identity in 52 aa overlap~SCF81.28c%2C probable aldo/keto reductase (partial CDS)%2C len: >307 aa%3B similar to TR:AAD30468 (EMBL:AF124928) Streptomyces clavuligerus  aldo/keto reductase family 2 enzyme Cvm1%2C 344 aa%3B fasta scores: opt: 521 z-score: 608.2 E(): 1.7e-26%3B 35.3%25 identity in 323 aa overlap and to SW:NORA_ASPFL (EMBL:U32377) Aspergillus flavus Norsolorinic acid reductase (EC 1.1.1.-) NorA%2C 388 aa%3B fasta scores: opt: 562 z-score: 654.8 E(): 4.3e-29%3B 33.7%25 identity in 303 aa overlap. Contains match to Pfam entry PF00248 aldo_ket_red%2C Aldo/keto reductase family;gbkey=CDS;gene=3SCF60.01c;product=aldo/keto reductase;protein_id=NP_733514.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	819646	819786	.	-	.	ID=id868;Dbxref=GeneID:1096192;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 28.20%2C E-value 1.9e-07;gbkey=misc_feature;gene=3SCF60.01c
NC_003888.3	RefSeq	ribosome_entry_site	820125	820128	.	-	.	ID=id869;gbkey=RBS
NC_003888.3	RefSeq	gene	820194	820751	.	-	.	ID=gene756;Dbxref=GeneID:1096193;Name=3SCF60.02c;gbkey=Gene;gene=3SCF60.02c;gene_biotype=protein_coding;gene_synonym=3SCF60.02c;locus_tag=SCO0770
NC_003888.3	RefSeq	CDS	820194	820751	.	-	0	ID=cds736;Parent=gene756;Dbxref=Genbank:NP_625072.1,GeneID:1096193;Name=NP_625072.1;Note=3SCF60.02c%2C possible membrane protein%2C len: 185 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=3SCF60.02c;product=hypothetical protein;protein_id=NP_625072.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	820469	828852	.	+	.	ID=id870;Note=EMBL:AF072709 Streptomyces lividans amplifiable element AUD4: transcriptional regulator%2C ferredoxin%2C cytochrome P450 oxidoreductase%2C and oxidoreductase genes%2C complete cds%3B and unknown genes.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	820761	821198	.	-	.	ID=gene757;Dbxref=GeneID:1096194;Name=3SCF60.03c;gbkey=Gene;gene=3SCF60.03c;gene_biotype=protein_coding;gene_synonym=3SCF60.03c;locus_tag=SCO0771
NC_003888.3	RefSeq	CDS	820761	821198	.	-	0	ID=cds737;Parent=gene757;Dbxref=Genbank:NP_625073.1,GeneID:1096194;Name=NP_625073.1;Note=3SCF60.03c%2C conserved hypothetical protein%2C len: 145 aa%3B identical to TR:O85694 (EMBL:AF072709) Streptomyces lividans hypothetical 17.2 kDa protein%2C 145 aa;gbkey=CDS;gene=3SCF60.03c;product=hypothetical protein;protein_id=NP_625073.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	821205	821210	.	-	.	ID=id871;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	821286	821290	.	+	.	ID=id872;gbkey=RBS
NC_003888.3	RefSeq	gene	821295	821873	.	+	.	ID=gene758;Dbxref=GeneID:1096195;Name=3SCF60.04;gbkey=Gene;gene=3SCF60.04;gene_biotype=protein_coding;gene_synonym=3SCF60.04;locus_tag=SCO0772
NC_003888.3	RefSeq	CDS	821295	821873	.	+	0	ID=cds738;Parent=gene758;Dbxref=Genbank:NP_625074.1,GeneID:1096195;Name=NP_625074.1;Note=3SCF60.04%2C possible regulatory protein%2C len: 192 aa%3B identical to TR:O85695 (EMBL:AF072709) Streptomyces lividans  transcriptional regulator%2C 192 aa. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=3SCF60.04;product=regulatory protein;protein_id=NP_625074.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	821322	821462	.	+	.	ID=id873;Dbxref=GeneID:1096195;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 38.00%2C E-value 3.6e-08;gbkey=misc_feature;gene=3SCF60.04
NC_003888.3	RefSeq	gene	821848	822048	.	-	.	ID=gene759;Dbxref=GeneID:1096196;Name=3SCF60.05c;gbkey=Gene;gene=3SCF60.05c;gene_biotype=protein_coding;gene_synonym=3SCF60.05c,soyB2;locus_tag=SCO0773
NC_003888.3	RefSeq	CDS	821848	822048	.	-	0	ID=cds739;Parent=gene759;Dbxref=Genbank:NP_625075.1,GeneID:1096196;Name=NP_625075.1;Note=3SCF60.05c%2C soyB2%2C probable ferredoxin%2C len: 66 aa%3B identical to TR:O85696 (EMBL:AF072709) Streptomyces lividans  ferredoxin%2C 66 aa and similar to SW:FERS_STRGR (EMBL:X63601) Streptomyces griseus ferredoxin SoyB%2C 65 aa%3B fasta scores: opt: 269 z-score: 369.1 E(): 5e-13%3B 61.9%25 identity in 63 aa overlap;gbkey=CDS;gene=3SCF60.05c;product=ferredoxin;protein_id=NP_625075.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	822057	822062	.	-	.	ID=id874;gbkey=RBS
NC_003888.3	RefSeq	gene	822061	823299	.	-	.	ID=gene760;Dbxref=GeneID:1096197;Name=3SCF60.06c;gbkey=Gene;gene=3SCF60.06c;gene_biotype=protein_coding;gene_synonym=3SCF60.06c;locus_tag=SCO0774
NC_003888.3	RefSeq	CDS	822061	823299	.	-	0	ID=cds740;Parent=gene760;Dbxref=Genbank:NP_625076.1,GeneID:1096197;Name=NP_625076.1;Note=3SCF60.06c%2C probable cytochrome P450%2C len: 412 aa%3B almost identical to TR:O85697 (EMBL:AF072709) Streptomyces lividans  cytochrome P450 oxidoreductase%2C 406 aa and highly similar to SW:CPXH_STRGR (EMBL:X63601) Streptomyces griseus cytochrome P450 SoyC%2C 412 aa%3B fasta scores: opt: 1894 z-score: 2107.2 E(): 0%3B 67.5%25 identity in 412 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450 and match to Prosite entry PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=CDS;gene=3SCF60.06c;product=cytochrome P450;protein_id=NP_625076.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	822064	823248	.	-	.	ID=id875;Dbxref=GeneID:1096197;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 288.90%2C E-value 6.5e-83;gbkey=misc_feature;gene=3SCF60.06c
NC_003888.3	RefSeq	sequence_feature	822211	822240	.	-	.	ID=id876;Dbxref=GeneID:1096197;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=3SCF60.06c
NC_003888.3	RefSeq	sequence_feature	823252	823296	.	-	.	ID=id877;Dbxref=GeneID:1096197;Note=region rich in threonine amino acid residues;gbkey=misc_feature;gene=3SCF60.06c
NC_003888.3	RefSeq	ribosome_entry_site	823305	823309	.	-	.	ID=id878;gbkey=RBS
NC_003888.3	RefSeq	gene	823609	824058	.	+	.	ID=gene761;Dbxref=GeneID:1096198;Name=3SCF60.07;gbkey=Gene;gene=3SCF60.07;gene_biotype=protein_coding;gene_synonym=3SCF60.07;locus_tag=SCO0775
NC_003888.3	RefSeq	CDS	823609	824058	.	+	0	ID=cds741;Parent=gene761;Dbxref=Genbank:NP_625077.1,GeneID:1096198;Name=NP_625077.1;Note=3SCF60.07%2C conserved hypothetical protein%2C len: 149 aa%3B identical to TR:O85698 (EMBL:AF072709) Streptomyces lividans hypothetical 16.7 kDa protein%2C 149 aa and similar to SW:YF58_MYCTU (EMBL:Z74020) Mycobacterium tuberculosis hypothetical 16.4 kDa protein MTCY48.07c%2C 148 aa%3B fasta scores: opt: 695 z-score: 894.5 E(): 0%3B 69.1%25 identity in 149 aa overlap;gbkey=CDS;gene=3SCF60.07;product=hypothetical protein;protein_id=NP_625077.1;transl_table=11
NC_003888.3	RefSeq	gene	824123	825139	.	-	.	ID=gene762;Dbxref=GeneID:1096199;Name=3SCF60.08c;gbkey=Gene;gene=3SCF60.08c;gene_biotype=protein_coding;gene_synonym=3SCF60.08c;locus_tag=SCO0776
NC_003888.3	RefSeq	CDS	824123	825139	.	-	0	ID=cds742;Parent=gene762;Dbxref=Genbank:NP_625078.1,GeneID:1096199;Name=NP_625078.1;Note=3SCF60.08c%2C possible integral membrane protein%2C len: 338 aa%3B identical to TR:O85699 (EMBL:AF072709) Streptomyces lividans hypothetical 35.5 kDa protein%2C 338 aa. Contains Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=3SCF60.08c;product=hypothetical protein;protein_id=NP_625078.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	824177	824884	.	-	.	ID=id879;Dbxref=GeneID:1096199;Note=Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family%2C score 8.50%2C E-value 0.00029;gbkey=misc_feature;gene=3SCF60.08c
NC_003888.3	RefSeq	gene	825287	826312	.	+	.	ID=gene763;Dbxref=GeneID:1096200;Name=3SCF60.09;gbkey=Gene;gene=3SCF60.09;gene_biotype=protein_coding;gene_synonym=3SCF60.09;locus_tag=SCO0777
NC_003888.3	RefSeq	CDS	825287	826312	.	+	0	ID=cds743;Parent=gene763;Dbxref=Genbank:NP_625079.1,GeneID:1096200;Name=NP_625079.1;Note=3SCF60.09%2C conserved hypothetical protein%2C len: 341 aa%3B identical to TR:O85700 (EMBL:AF072709) Streptomyces lividans hypothetical 38.1 kDa protein%2C 341 aa and similar to TR:AAG05998 (EMBL:AE004689) Pseudomonas aeruginosa conserved hypothetical protein PA2610%2C 324 aa%3B fasta scores: opt: 838 z-score: 962.6 E(): 0%3B 44.6%25 identity in 323 aa overlap. Contains Pfam match to entry PF00043 GST%2C Glutathione S-transferases;gbkey=CDS;gene=3SCF60.09;product=hypothetical protein;protein_id=NP_625079.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	825767	825988	.	+	.	ID=id880;Dbxref=GeneID:1096200;Note=Pfam match to entry PF00043 GST%2C Glutathione S-transferases.%2C score 19.10%2C E-value 8.8e-05;gbkey=misc_feature;gene=3SCF60.09
NC_003888.3	RefSeq	ribosome_entry_site	826349	826354	.	+	.	ID=id881;gbkey=RBS
NC_003888.3	RefSeq	gene	826361	826669	.	+	.	ID=gene764;Dbxref=GeneID:1096201;Name=3SCF60.10;gbkey=Gene;gene=3SCF60.10;gene_biotype=protein_coding;gene_synonym=3SCF60.10;locus_tag=SCO0778
NC_003888.3	RefSeq	CDS	826361	826669	.	+	0	ID=cds744;Parent=gene764;Dbxref=Genbank:NP_625080.1,GeneID:1096201;Name=NP_625080.1;Note=3SCF60.10%2C possible integral membrane protein%2C len: 102 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=3SCF60.10;product=hypothetical protein;protein_id=NP_625080.1;transl_table=11
NC_003888.3	RefSeq	gene	826690	827085	.	-	.	ID=gene765;Dbxref=GeneID:1096202;Name=3SCF60.11c;gbkey=Gene;gene=3SCF60.11c;gene_biotype=protein_coding;gene_synonym=3SCF60.11c;locus_tag=SCO0779
NC_003888.3	RefSeq	CDS	826690	827085	.	-	0	ID=cds745;Parent=gene765;Dbxref=Genbank:NP_625081.1,GeneID:1096202;Name=NP_625081.1;Note=3SCF60.11c%2C conserved hypothetical protein%2C len: 131 aa%3B identical to TR:O85701 (EMBL:AF072709) Streptomyces lividans hypothetical 14.2 kDa protein%2C 131 aa and similar to TR:Q9L0J1 (EMBL:AL161691) Streptomyces coelicolor hypothetical 15.7 kDa protein SCD40A.20%2C 145 aa%3B fasta scores: opt: 179 z-score: 233.2 E(): 1.8e-05%3B 31.8%25 identity in 110 aa overlap;gbkey=CDS;gene=3SCF60.11c;product=hypothetical protein;protein_id=NP_625081.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	827090	827094	.	-	.	ID=id882;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	827268	827272	.	+	.	ID=id883;gbkey=RBS
NC_003888.3	RefSeq	gene	827277	828218	.	+	.	ID=gene766;Dbxref=GeneID:1096203;Name=3SCF60.12;gbkey=Gene;gene=3SCF60.12;gene_biotype=protein_coding;gene_synonym=3SCF60.12;locus_tag=SCO0780
NC_003888.3	RefSeq	CDS	827277	828218	.	+	0	ID=cds746;Parent=gene766;Dbxref=Genbank:NP_625082.1,GeneID:1096203;Name=NP_625082.1;Note=3SCF60.12%2C probable zinc-binding oxidoreductase%2C len: 313 aa%3B identical to TR:O85702 (EMBL:AF072709) Streptomyces lividans  oxidoreductase%2C 313 aa and similar to SW:QOR_HUMAN (EMBL:S58039) Homo sapiens quinone oxidoreductase (EC 1.6.5.5) CryZ%2C 329 aa%3B fasta scores: opt: 467 z-score: 501.6 E(): 2.1e-20%3B 32.5%25 identity in 329 aa overlap and to TR:CAB70647 (EMBL:AL137242) Streptomyces coelicolor zinc-binding oxidoreductase SC8F4.21%2C 339 aa%3B fasta scores: opt: 1311 z-score: 1209.2 E(): 0%3B 66.1%25 identity in 310 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and match to Prosite entry PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=CDS;gene=3SCF60.12;product=zinc-binding oxidoreductase;protein_id=NP_625082.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	827325	828212	.	+	.	ID=id884;Dbxref=GeneID:1096203;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 274.80%2C E-value 1.1e-78;gbkey=misc_feature;gene=3SCF60.12
NC_003888.3	RefSeq	sequence_feature	827712	827777	.	+	.	ID=id885;Dbxref=GeneID:1096203;Note=PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=misc_feature;gene=3SCF60.12
NC_003888.3	RefSeq	gene	828289	828789	.	+	.	ID=gene767;Dbxref=GeneID:1096204;Name=3SCF60.13;gbkey=Gene;gene=3SCF60.13;gene_biotype=protein_coding;gene_synonym=3SCF60.13;locus_tag=SCO0781
NC_003888.3	RefSeq	CDS	828289	828789	.	+	0	ID=cds747;Parent=gene767;Dbxref=Genbank:NP_625083.1,GeneID:1096204;Name=NP_625083.1;Note=3SCF60.13%2C possible anti sigma factor antagonist%2C len: 166 aa%3B C-terminal region identical to TR:O85703 (EMBL:AF072709) Streptomyces lividans hypothetical 14.3 kDa protein%2C 128 aa and similar to SW:RSBV_STRCO (EMBL:AF134889) Streptomyces coelicolor anti-sigma B factor antagonist BldG%2C 113 aa%3B fasta scores: opt: 199 z-score: 266.9 E(): 2.4e-07%3B 31.5%25 identity in 108 aa overlap. Contains Pfam match to entry PF01740 STAS%2C STAS domain;gbkey=CDS;gene=3SCF60.13;product=anti sigma factor antagonist;protein_id=NP_625083.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	828433	828747	.	+	.	ID=id886;Dbxref=GeneID:1096204;Note=Pfam match to entry PF01740 STAS%2C STAS domain%2C score 88.90%2C E-value 1e-22;gbkey=misc_feature;gene=3SCF60.13
NC_003888.3	RefSeq	gene	828755	829708	.	-	.	ID=gene768;Dbxref=GeneID:1096205;Name=3SCF60.14c;gbkey=Gene;gene=3SCF60.14c;gene_biotype=protein_coding;gene_synonym=3SCF60.14c,prsA;locus_tag=SCO0782
NC_003888.3	RefSeq	CDS	828755	829708	.	-	0	ID=cds748;Parent=gene768;Dbxref=Genbank:NP_625084.1,GeneID:1096205;Name=NP_625084.1;Note=3SCF60.14c%2C prsA%2C ribose-phosphate pyrophosphokinase%2C len: 317 aa%3B similar to SW:KPRS_SYNP7 (EMBL:D14994) Synechococcus sp. ribose-phosphate pyrophosphokinase (EC 2.7.6.1) PrsA%2C 331 aa%3B fasta scores: opt: 795 z-score: 931.4 E(): 0%3B 42.7%25 identity in 307 aa overlap. Contains Pfam match to entry PF00156 Pribosyltran%2C Phosphoribosyl transferase domain;gbkey=CDS;gene=3SCF60.14c;product=ribose-phosphate pyrophosphokinase;protein_id=NP_625084.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	828893	829306	.	-	.	ID=id887;Dbxref=GeneID:1096205;Note=Pfam match to entry PF00156 Pribosyltran%2C Phosphoribosyl transferase domain%2C score 62.90%2C E-value 6.7e-15;gbkey=misc_feature;gene=3SCF60.14c
NC_003888.3	RefSeq	ribosome_entry_site	829715	829719	.	-	.	ID=id888;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	829894	829897	.	+	.	ID=id889;gbkey=RBS
NC_003888.3	RefSeq	gene	829910	831817	.	+	.	ID=gene769;Dbxref=GeneID:1096206;Name=3SCF60.15;gbkey=Gene;gene=3SCF60.15;gene_biotype=protein_coding;gene_synonym=3SCF60.15,tetM;locus_tag=SCO0783
NC_003888.3	RefSeq	CDS	829910	831817	.	+	0	ID=cds749;Parent=gene769;Dbxref=Genbank:NP_625085.1,GeneID:1096206;Name=NP_625085.1;Note=3SCF60.15%2C tetM%2C tetracycline resistance protein%2C len: 635 aa%3B identical to SW:TETM_STRLI (EMBL:M74049) Streptomyces lividans tetracycline resistance protein TetM%2C 639 aa. Contains Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family and PF00679 EFG_C%2C Elongation factor G C-terminus and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=3SCF60.15;product=tetracycline resistance protein;protein_id=NP_625085.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	829910	831190	.	+	.	ID=id890;Dbxref=GeneID:1096206;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family%2C score 246.70%2C E-value 2e-72;gbkey=misc_feature;gene=3SCF60.15
NC_003888.3	RefSeq	sequence_feature	829937	829960	.	+	.	ID=id891;Dbxref=GeneID:1096206;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=3SCF60.15
NC_003888.3	RefSeq	sequence_feature	831263	831775	.	+	.	ID=id892;Dbxref=GeneID:1096206;Note=Pfam match to entry PF00679 EFG_C%2C Elongation factor G C-terminus%2C score 201.10%2C E-value 1.7e-56;gbkey=misc_feature;gene=3SCF60.15
NC_003888.3	RefSeq	ribosome_entry_site	831819	831825	.	+	.	ID=id893;gbkey=RBS
NC_003888.3	RefSeq	gene	831835	832518	.	+	.	ID=gene770;Dbxref=GeneID:1096207;Name=3SCF60.16;gbkey=Gene;gene=3SCF60.16;gene_biotype=protein_coding;gene_synonym=3SCF60.16;locus_tag=SCO0784
NC_003888.3	RefSeq	CDS	831835	832518	.	+	0	ID=cds750;Parent=gene770;Dbxref=Genbank:NP_625086.1,GeneID:1096207;Name=NP_625086.1;Note=3SCF60.16%2C possible hypothetical protein%2C len: 227 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=3SCF60.16;product=hypothetical protein;protein_id=NP_625086.1;transl_table=11
NC_003888.3	RefSeq	gene	832515	833198	.	-	.	ID=gene771;Dbxref=GeneID:1096208;Name=3SCF60.17c;gbkey=Gene;gene=3SCF60.17c;gene_biotype=protein_coding;gene_synonym=3SCF60.17c;locus_tag=SCO0785
NC_003888.3	RefSeq	CDS	832515	833198	.	-	0	ID=cds751;Parent=gene771;Dbxref=Genbank:NP_625087.1,GeneID:1096208;Name=NP_625087.1;Note=3SCF60.17c%2C possible integral membrane protein%2C len: 227 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=3SCF60.17c;product=hypothetical protein;protein_id=NP_625087.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	833199	833202	.	-	.	ID=id894;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	833250	833254	.	+	.	ID=id895;gbkey=RBS
NC_003888.3	RefSeq	gene	833261	833800	.	+	.	ID=gene772;Dbxref=GeneID:1096209;Name=3SCF60.18;gbkey=Gene;gene=3SCF60.18;gene_biotype=protein_coding;gene_synonym=3SCF60.18;locus_tag=SCO0786
NC_003888.3	RefSeq	CDS	833261	833800	.	+	0	ID=cds752;Parent=gene772;Dbxref=Genbank:NP_625088.1,GeneID:1096209;Name=NP_625088.1;Note=3SCF60.18%2C possible integral membrane protein%2C len: 179 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=3SCF60.18;product=hypothetical protein;protein_id=NP_625088.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	833923	833926	.	+	.	ID=id896;gbkey=RBS
NC_003888.3	RefSeq	gene	833931	835199	.	+	.	ID=gene773;Dbxref=GeneID:1096210;Name=3SCF60.19;gbkey=Gene;gene=3SCF60.19;gene_biotype=protein_coding;gene_synonym=3SCF60.19;locus_tag=SCO0787
NC_003888.3	RefSeq	CDS	833931	835199	.	+	0	ID=cds753;Parent=gene773;Dbxref=Genbank:NP_625089.1,GeneID:1096210;Name=NP_625089.1;Note=3SCF60.19%2C probable  hydrolase%2C len: 422 aa%3B similar to TR:O68641 (EMBL:AF052745) Oerskovia xanthineolytica beta-1%2C3-glucanase II BglII%2C 435 aa%3B fasta scores: opt: 999 z-score: 1047.9 E(): 0%3B 52.4%25 identity in 443 aa overlap. Contains Pfam match to entry PF00722 Glyco_hydro_16%2C Glycosyl hydrolases family 16 and PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies and match to Prosite entry PS01034 Glycosyl hydrolases family 16 active sites. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=3SCF60.19;product=hydrolase;protein_id=NP_625089.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	834042	834797	.	+	.	ID=id897;Dbxref=GeneID:1096210;Note=Pfam match to entry PF00722 Glyco_hydro_16%2C Glycosyl hydrolases family 16%2C score -20.40%2C E-value 1.9e-06;gbkey=misc_feature;gene=3SCF60.19
NC_003888.3	RefSeq	sequence_feature	834444	834479	.	+	.	ID=id898;Dbxref=GeneID:1096210;Note=PS01034 Glycosyl hydrolases family 16 active sites;gbkey=misc_feature;gene=3SCF60.19
NC_003888.3	RefSeq	sequence_feature	834813	835196	.	+	.	ID=id899;Dbxref=GeneID:1096210;Note=Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies.%2C score 114.60%2C E-value 1.9e-30;gbkey=misc_feature;gene=3SCF60.19
NC_003888.3	RefSeq	gene	835238	835474	.	-	.	ID=gene774;Dbxref=GeneID:1096211;Name=3SCF60.20c;gbkey=Gene;gene=3SCF60.20c;gene_biotype=protein_coding;gene_synonym=3SCF60.20c;locus_tag=SCO0788
NC_003888.3	RefSeq	CDS	835238	835474	.	-	0	ID=cds754;Parent=gene774;Dbxref=Genbank:NP_625090.1,GeneID:1096211;Name=NP_625090.1;Note=3SCF60.20c%2C unknown%2C len: 78 aa;gbkey=CDS;gene=3SCF60.20c;product=hypothetical protein;protein_id=NP_625090.1;transl_table=11
NC_003888.3	RefSeq	gene	835547	836665	.	+	.	ID=gene775;Dbxref=GeneID:1096212;Name=3SCF60.21;gbkey=Gene;gene=3SCF60.21;gene_biotype=protein_coding;gene_synonym=3SCF60.21;locus_tag=SCO0789
NC_003888.3	RefSeq	CDS	835547	836665	.	+	0	ID=cds755;Parent=gene775;Dbxref=Genbank:NP_625091.1,GeneID:1096212;Name=NP_625091.1;Note=3SCF60.21%2C conserved hypothetical protein%2C len: 372 aa%3B C-terminal region identical to TR:P72464 (EMBL:Z70724) Streptomyces lividans hypothetical protein ORF1%2C 343 aa and similar to TR:P96221 (EMBL:Z83864) Mycobacterium tuberculosis hypothetical 36.7 kDa protein MTCY01A6.12%2C 335 aa%3B fasta scores: opt: 1286 z-score: 1468.5 E(): 0%3B 61.0%25 identity in 336 aa overlap. Contains Pfam match to entry PF02231 PHP_N%2C PHP domain N-terminal region;gbkey=CDS;gene=3SCF60.21;product=hypothetical protein;protein_id=NP_625091.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	835928	836161	.	+	.	ID=id900;Dbxref=GeneID:1096212;Note=Pfam match to entry PF02231 PHP_N%2C PHP domain N-terminal region%2C score 100.90%2C E-value 2.5e-26;gbkey=misc_feature;gene=3SCF60.21
NC_003888.3	RefSeq	gene	836721	837377	.	+	.	ID=gene776;Dbxref=GeneID:1096213;Name=3SCF60.22;gbkey=Gene;gene=3SCF60.22;gene_biotype=protein_coding;gene_synonym=3SCF60.22,SCF43.01;locus_tag=SCO0790
NC_003888.3	RefSeq	CDS	836721	837377	.	+	0	ID=cds756;Parent=gene776;Dbxref=Genbank:NP_733515.1,GeneID:1096213;Name=NP_733515.1;Note=SCF43.01%2C possible hydrolase%2C partial CDS%2C len: > 98 aa. Identical over the available sequence to Streptomyces lividans TR:P72465(EMBL:Z70724) substrate hyphae associated protein%2C Orf2 (218 aa)%2C fasta scores opt: 648 z-score: 826.2 E(): 0 100.0%25 identity in 98 aa overlap. Also similar to several phosphatases e.g. Streptomyces collinus TR:Q9X654(EMBL:AF131877) NapH phosphatase (231 aa)%2C fasta scores opt: 186 z-score: 245.7 E(): 2.6e-06 41.9%25 identity in 86 aa overlap.~3SCF60.22%2C possible hydrolase (fragment)%2C len: >154 aa%3B identical to N-terminal region of TR:P72465 (EMBL:Z70724) Streptomyces lividans coat protein ORF2%2C 218 aa and similar to TR:Q9RWE0 (EMBL:AE001929) Deinococcus radiodurans hydrolase%2C CbbY/CbbZ/Gph/YirH family DR0729%2C 259 aa%3B fasta scores: opt: 227 z-score: 282.6 E(): 3.3e-08%3B 30.3%25 identity in 152 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=3SCF60.22;product=hydrolase;protein_id=NP_733515.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	836724	837179	.	+	.	ID=id901;Dbxref=GeneID:1096213;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 50.20%2C E-value 4.5e-11;gbkey=misc_feature;gene=3SCF60.22
NC_003888.3	RefSeq	gene	837541	838680	.	+	.	ID=gene777;Dbxref=GeneID:1096214;Name=SCF43.02;gbkey=Gene;gene=SCF43.02;gene_biotype=protein_coding;gene_synonym=SCF43.02;locus_tag=SCO0791
NC_003888.3	RefSeq	CDS	837541	838680	.	+	0	ID=cds757;Parent=gene777;Dbxref=Genbank:NP_625092.1,GeneID:1096214;Name=NP_625092.1;Note=SCF43.02%2C possible integral membrane protein%2C len: 379 aa. Almost identical to Streptomyces lividans TR:P72466(EMBL:Z70724) substrate hyphae associated protein%2C Orf3 (329 aa)%2C fasta scores opt: 2115 z-score: 2334.5 E():0 99.4%25 identity in 329 aa overlap. Also weakly similar to Mycobacterium tuberculosis SW:Y0BU_MYCTU(EMBL:Z77724) hypothetical 36.8 KD protein (355 aa)%2C fasta scores opt: 208 z-score: 236.0 E(): 9.3e-06 26.1%25 identity in 303 aa overlap and to a downstream CDS%2C SCF43.07%2C  integral membrane protein (419 aa)%2C fasta scores opt: 276 z-score: 252.1 E(): 1.2e-08 28.1%25 identity in 366 aa overlap. Note SCF43.02 is 50 aa longer than Streptomyces lividans Orf3. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF43.02;product=hypothetical protein;protein_id=NP_625092.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	838966	838970	.	+	.	ID=id902;gbkey=RBS
NC_003888.3	RefSeq	gene	838977	840008	.	+	.	ID=gene778;Dbxref=GeneID:1096215;Name=SCF43.03;gbkey=Gene;gene=SCF43.03;gene_biotype=protein_coding;gene_synonym=SCF43.03;locus_tag=SCO0792
NC_003888.3	RefSeq	CDS	838977	840008	.	+	0	ID=cds758;Parent=gene778;Dbxref=Genbank:NP_625093.1,GeneID:1096215;Name=NP_625093.1;Note=SCF43.03%2C unknown%2C len: 343 aa. Almost identical to Streptomyces lividans TR:P72467(EMBL:Z70724) substrate hyphae associated protein%2C Orf4 (343 aa)%2C fasta scores opt: 2274 z-score: 2584.7 E():0 99.1%25 identity in 343 aa overlap. Also weakly similar to Streptomyces coelicolor TR:Q9WX08(EMBL:AL079345) epimerase (353 aa)%2C fasta scores opt: 275 z-score: 318.0 E(): 2.5e-10 25.9%25 identity in 340 aa overlap.;gbkey=CDS;gene=SCF43.03;product=hypothetical protein;protein_id=NP_625093.1;transl_table=11
NC_003888.3	RefSeq	gene	840026	840334	.	-	.	ID=gene779;Dbxref=GeneID:1096216;Name=SCF43.04c;gbkey=Gene;gene=SCF43.04c;gene_biotype=protein_coding;gene_synonym=SCF43.04c;locus_tag=SCO0793
NC_003888.3	RefSeq	CDS	840026	840334	.	-	0	ID=cds759;Parent=gene779;Dbxref=Genbank:NP_625094.1,GeneID:1096216;Name=NP_625094.1;Note=SCF43.04c%2C unknown%2C len: 102 aa.;gbkey=CDS;gene=SCF43.04c;product=hypothetical protein;protein_id=NP_625094.1;transl_table=11
NC_003888.3	RefSeq	gene	840399	841688	.	-	.	ID=gene780;Dbxref=GeneID:1096217;Name=SCF43.05c;gbkey=Gene;gene=SCF43.05c;gene_biotype=protein_coding;gene_synonym=SCF43.05c;locus_tag=SCO0794
NC_003888.3	RefSeq	CDS	840399	841688	.	-	0	ID=cds760;Parent=gene780;Dbxref=Genbank:NP_625095.1,GeneID:1096217;Name=NP_625095.1;Note=SCF43.05c%2C possible ROK family transcriptional regulator%2C len: 429 aa. Similar to Anaerocellum thermophilum SW:XYLR_ANATH (EMBL:Z69782) xylose repressor (399 aa)%2C fasta scores opt: 519 z-score: 575.9 E(): 1.1e-24 28.1%25 identity in 402 aa overlap. Also highly similar to Streptomyces coelicolor TR:O87855(EMBL:AL031013) transcriptional regulator SC8A6.21c (441 aa)%2C fasta scores opt: 2034 z-score: 2241.7 E():0 71.4%25 identity in 434 aa overlap. Contains a Pfam match to entry PF00480 ROK%2C ROK family and a helix-turn-helix motif situated between residues 30..51 (+3.09 SD).;gbkey=CDS;gene=SCF43.05c;product=transcriptional regulator;protein_id=NP_625095.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	840864	841112	.	-	.	ID=id903;Dbxref=GeneID:1096217;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 22.80%2C E-value 1e-05;gbkey=misc_feature;gene=SCF43.05c
NC_003888.3	RefSeq	ribosome_entry_site	841693	841697	.	-	.	ID=id904;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	841868	841872	.	+	.	ID=id905;gbkey=RBS
NC_003888.3	RefSeq	gene	841878	842372	.	+	.	ID=gene781;Dbxref=GeneID:1096218;Name=SCF43.06;gbkey=Gene;gene=SCF43.06;gene_biotype=protein_coding;gene_synonym=SCF43.06;locus_tag=SCO0795
NC_003888.3	RefSeq	CDS	841878	842372	.	+	0	ID=cds761;Parent=gene781;Dbxref=Genbank:NP_625096.1,GeneID:1096218;Name=NP_625096.1;Note=SCF43.06%2C unknown%2C len: 164 aa. Highly similar to a protein of unknown function from Streptomyces coelicolor SC1G2.10 (165 aa)%2C fasta scores opt: 663 z-score: 732.7 E():0 60.1%25 identity in 163 aa overlap;gbkey=CDS;gene=SCF43.06;product=hypothetical protein;protein_id=NP_625096.1;transl_table=11
NC_003888.3	RefSeq	gene	842488	843747	.	+	.	ID=gene782;Dbxref=GeneID:1096219;Name=SCF43.07;gbkey=Gene;gene=SCF43.07;gene_biotype=protein_coding;gene_synonym=SCF43.07;locus_tag=SCO0796
NC_003888.3	RefSeq	CDS	842488	843747	.	+	0	ID=cds762;Parent=gene782;Dbxref=Genbank:NP_625097.1,GeneID:1096219;Name=NP_625097.1;Note=SCF43.07%2C possible integral membrane protein%2C len: 419 aa. Weakly similar to several proteins of undefined function e.g. Streptomyces lividans TR:P72466(EMBL:Z70724) a substrate hyphae associated protein%2C Orf3 (329 aa)%2C fasta scores opt: opt: 221 z-score: 250.2 E(): 1.5e-06 27.0%25 identity in 318 aa overlap. Also similar to the upstream CDS SCF43.02%2C integral membrane protein (379 aa)%2C fasta scores opt: 276 z-score: 252.1 E(): 1.2e-08 28.1%25 identity in 366 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF43.07;product=hypothetical protein;protein_id=NP_625097.1;transl_table=11
NC_003888.3	RefSeq	gene	843808	844860	.	+	.	ID=gene783;Dbxref=GeneID:1096220;Name=SCF43.08;gbkey=Gene;gene=SCF43.08;gene_biotype=protein_coding;gene_synonym=SCF43.08;locus_tag=SCO0797
NC_003888.3	RefSeq	CDS	843808	844860	.	+	0	ID=cds763;Parent=gene783;Dbxref=Genbank:NP_625098.1,GeneID:1096220;Name=NP_625098.1;Note=SCF43.08%2C possible integral membrane protein%2C len: 350 aa. Contains possible membrane spanning hydrophobic domains and a TTA /leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SCF43.08;product=hypothetical protein;protein_id=NP_625098.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	844294	844296	.	+	.	ID=id906;Dbxref=GeneID:1096220;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCF43.08
NC_003888.3	RefSeq	gene	844881	846116	.	+	.	ID=gene784;Dbxref=GeneID:1096221;Name=SCF43.09;gbkey=Gene;gene=SCF43.09;gene_biotype=protein_coding;gene_synonym=SCF43.09;locus_tag=SCO0798
NC_003888.3	RefSeq	CDS	844881	846116	.	+	0	ID=cds764;Parent=gene784;Dbxref=Genbank:NP_625099.1,GeneID:1096221;Name=NP_625099.1;Note=SCF43.09%2C hypothetical protein%2C len: 411 aa. Weakly similar to several proteins of undefined function e.g. Lactococcus lactis TR:O86271(EMBL:AJ001008) OrfB (341 aa)%2C fasta scores opt: 579 z-score: 550.5 E(): 2.8e-23 31.1%25 identity in 347 aa overlap.;gbkey=CDS;gene=SCF43.09;product=hypothetical protein;protein_id=NP_625099.1;transl_table=11
NC_003888.3	RefSeq	gene	846084	846809	.	-	.	ID=gene785;Dbxref=GeneID:1096222;Name=SCF43.10c;gbkey=Gene;gene=SCF43.10c;gene_biotype=protein_coding;gene_synonym=SCF43.10c;locus_tag=SCO0799
NC_003888.3	RefSeq	CDS	846084	846809	.	-	0	ID=cds765;Parent=gene785;Dbxref=Genbank:NP_625100.1,GeneID:1096222;Name=NP_625100.1;Note=SCF43.10c%2C unknown%2C len: 241 aa. Weakly similar to Mycobacterium tuberculosis TR:P96239(EMBL:Z83864) hypothetical 28.3 KD protein (258 aa)%2C fasta scores opt: 270 z-score: 339.5 E(): 1.6e-11 33.5%25 identity in 272 aa overlap.;gbkey=CDS;gene=SCF43.10c;product=hypothetical protein;protein_id=NP_625100.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	846814	846819	.	-	.	ID=id907;gbkey=RBS
NC_003888.3	RefSeq	gene	846917	847534	.	-	.	ID=gene786;Dbxref=GeneID:1096223;Name=SCF43.11c;gbkey=Gene;gene=SCF43.11c;gene_biotype=protein_coding;gene_synonym=SCF43.11c;locus_tag=SCO0800
NC_003888.3	RefSeq	CDS	846917	847534	.	-	0	ID=cds766;Parent=gene786;Dbxref=Genbank:NP_625101.1,GeneID:1096223;Name=NP_625101.1;Note=SCF43.11c%2C possible TetR-family transcriptional regulatory protein%2C len: 205 aa. Similar to several including: Escherichia coli SW:ACRR_ECOLI (EMBL:U00734) potential AcrAB operon repressor AcrR (215 aa)%2C fasta scores opt: 176 z-score: 223.7 E(): 4.5e-05 27.5%25 identity in 189 aa overlap and Streptomyces coelicolor TR:Q9XAE5 (EMBL:AL079356) hypothetical 24.2 KD protein SC6G9.37 (217 aa)%2C fasta scores opt: 282 z-score: 351.9 E(): 3.3e-12 33.2%25 identity in 196 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the  helix-turn-helix motif situated between residues 43..64 (+5.17 SD).;gbkey=CDS;gene=SCF43.11c;product=TetR family transcriptional regulator;protein_id=NP_625101.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	847322	847462	.	-	.	ID=id908;Dbxref=GeneID:1096223;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 35.90%2C E-value 3.1e-08;gbkey=misc_feature;gene=SCF43.11c
NC_003888.3	RefSeq	gene	847649	849232	.	+	.	ID=gene787;Dbxref=GeneID:1096224;Name=SCF43.12;gbkey=Gene;gene=SCF43.12;gene_biotype=protein_coding;gene_synonym=SCF43.12;locus_tag=SCO0801
NC_003888.3	RefSeq	CDS	847649	849232	.	+	0	ID=cds767;Parent=gene787;Dbxref=Genbank:NP_625102.1,GeneID:1096224;Name=NP_625102.1;Note=SCF43.12%2C possible cytochrome P450%2C len: 527 aa. Highly similar to the N-terminal P450 domain of Bacillus megaterium SW:CPXB_BACME (EMBL:J04832) cytochrome P450(BM-3) (1048 aa)%2C fasta scores opt: 789 z-score: 839.8 E():0 41.9%25 identity in 497 aa overlap. Also weakly similar to Eukaryotic cytochrome P450 proteins e.g. Homo sapiens (Human) SW:CPF3_HUMAN(EMBL:D12620) cytochrome P450 4F3 (leukotriene-B4 20-monooxygenase) (EC 1.14.13.30) (520 aa)%2C fasta scores opt: 553 z-score: 592.7 E(): 1.2e-25 29.2%25 identity in 390 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450 and a Prosite hit to PS00086 Cytochrome P450 cysteine heme-iron ligand signature.;gbkey=CDS;gene=SCF43.12;product=cytochrome P450;protein_id=NP_625102.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	847736	849121	.	+	.	ID=id909;Dbxref=GeneID:1096224;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 231.70%2C E-value 6.2e-71;gbkey=misc_feature;gene=SCF43.12
NC_003888.3	RefSeq	sequence_feature	848945	848974	.	+	.	ID=id910;Dbxref=GeneID:1096224;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SCF43.12
NC_003888.3	RefSeq	gene	849194	850042	.	-	.	ID=gene788;Dbxref=GeneID:1096225;Name=SCF43.13c;gbkey=Gene;gene=SCF43.13c;gene_biotype=protein_coding;gene_synonym=SCF43.13c;locus_tag=SCO0802
NC_003888.3	RefSeq	CDS	849194	850042	.	-	0	ID=cds768;Parent=gene788;Dbxref=Genbank:NP_625103.1,GeneID:1096225;Name=NP_625103.1;Note=SCF43.13c%2C unknown%2C len: 282 aa. Highly similar to several including: Bacillus megaterium TR:O24772(EMBL:AB005787) oxetanocin A resistance protein%2C OxrA (185 aa)%2C fasta scores opt: 632 z-score: 753.8 E():0 56.8%25 identity in 176 aa overlap and Bacillus subtilis SW:YYBG_BACSU(EMBL:D26185) hypothetical 31.3 KD protein (279 aa)%2C fasta scores opt: 1070 z-score: 1267.0 E():0 59.0%25 identity in 266 aa overlap. Contains 2xPfam matches to entry PF00805 Pentapeptide%2C Pentapeptide repeats (8 copies);gbkey=CDS;gene=SCF43.13c;product=hypothetical protein;protein_id=NP_625103.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	849284	849403	.	-	.	ID=id911;Dbxref=GeneID:1096225;Note=Pfam match to entry PF00805 Pentapeptide%2C Pentapeptide repeats (8 copies)%2C score 56.70%2C E-value 5e-13;gbkey=misc_feature;gene=SCF43.13c
NC_003888.3	RefSeq	repeat_region	849305	849455	.	-	.	ID=id912;Dbxref=GeneID:1096225;Note=degenerate repeat region containing 8x (C/G)(G/T)ACCT repeats;gbkey=repeat_region;gene=SCF43.13c
NC_003888.3	RefSeq	sequence_feature	849404	849514	.	-	.	ID=id913;Dbxref=GeneID:1096225;Note=Pfam match to entry PF00805 Pentapeptide%2C Pentapeptide repeats (8 copies)%2C score 9.10%2C E-value 0.4;gbkey=misc_feature;gene=SCF43.13c
NC_003888.3	RefSeq	ribosome_entry_site	850044	850048	.	-	.	ID=id914;gbkey=RBS
NC_003888.3	RefSeq	gene	850100	851074	.	-	.	ID=gene789;Dbxref=GeneID:1096226;Name=SCF43.14c;gbkey=Gene;gene=SCF43.14c;gene_biotype=protein_coding;gene_synonym=SCF43.14c;locus_tag=SCO0803
NC_003888.3	RefSeq	CDS	850100	851074	.	-	0	ID=cds769;Parent=gene789;Dbxref=Genbank:NP_625104.1,GeneID:1096226;Name=NP_625104.1;Note=SCF43.14c%2C possible RNA polymerase sigma factor%2C len: 330 aa. Similar to Mycobacterium smegmatis TR:O05767 (EMBL:U87307) extracytoplasmic function alternative sigma factor SigE (204 aa)%2C fasta scores opt: 234 z-score: 278.1 E(): 4.1e-08 29.1%25 identity in 175 aa overlap. Also highly similar to many other sigma factors e.g. Streptomyces coelicolor TR:Q9X8P3 (EMBL:AL049754) RNA polymerase sigma factor SCH10.04C (294 aa)%2C fasta scores opt: 915 z-score: 1056.2 E():0 52.9%25 identity in 293 aa overlap.;gbkey=CDS;gene=SCF43.14c;product=RNA polymerase sigma factor;protein_id=NP_625104.1;transl_table=11
NC_003888.3	RefSeq	gene	851097	851840	.	-	.	ID=gene790;Dbxref=GeneID:1096227;Name=SCF43.15c;gbkey=Gene;gene=SCF43.15c;gene_biotype=protein_coding;gene_synonym=SCF43.15c;locus_tag=SCO0804
NC_003888.3	RefSeq	CDS	851097	851840	.	-	0	ID=cds770;Parent=gene790;Dbxref=Genbank:NP_625105.1,GeneID:1096227;Name=NP_625105.1;Note=SCF43.15c%2C unknown%2C len: 247 aa. Weakly similar to several proteins of undefined function e.g. Pyrococcus horikoshii TR:O58235(EMBL:AP000002) (272 aa) fasta scores opt:323 z-score: 406.6 E(): 2.9e-15 28.2%25 identity in 227 aa overlap.;gbkey=CDS;gene=SCF43.15c;product=hypothetical protein;protein_id=NP_625105.1;transl_table=11
NC_003888.3	RefSeq	gene	851911	853212	.	-	.	ID=gene791;Dbxref=GeneID:1096228;Name=SCF43.16c;gbkey=Gene;gene=SCF43.16c;gene_biotype=protein_coding;gene_synonym=SCF43.16c;locus_tag=SCO0805
NC_003888.3	RefSeq	CDS	851911	853212	.	-	0	ID=cds771;Parent=gene791;Dbxref=Genbank:NP_625106.1,GeneID:1096228;Name=NP_625106.1;Note=SCF43.16c%2C possible prolyl aminopeptidase%2C len: 433 aa. Highly similar to several peptidases including: Aeromonas sobria SW:PIP_AERSO(EMBL:D30714) proline iminopeptidase (EC 3.4.11.5) (prolyl aminopeptidase) (424 aa)%2C fasta scores opt: 954 z-score: 1113.1 E():0 48.6%25 identity in 428 aa overlap and Hafnia alvei TR:P94800(EMBL:D61383) prolyl aminopeptidase (427 aa)%2C fasta scores opt: 1208 z-score: 1408.6 E():0 47.2%25 identity in 432 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SCF43.16c;product=prolyl aminopeptidase;protein_id=NP_625106.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	852205	852978	.	-	.	ID=id915;Dbxref=GeneID:1096228;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 29.30%2C E-value 5.6e-05;gbkey=misc_feature;gene=SCF43.16c
NC_003888.3	RefSeq	gene	853340	854365	.	-	.	ID=gene792;Dbxref=GeneID:1096229;Name=SCF43.17c;gbkey=Gene;gene=SCF43.17c;gene_biotype=protein_coding;gene_synonym=SCF43.17c;locus_tag=SCO0806
NC_003888.3	RefSeq	CDS	853340	854365	.	-	0	ID=cds772;Parent=gene792;Dbxref=Genbank:NP_625107.1,GeneID:1096229;Name=NP_625107.1;Note=SCF43.17c%2C possible LacI-family transcriptional regulatory protein%2C len: 341 aa. Similar to many regulators including: Escherichia coli SW:RBSR_ECOLI (EMBL:M13169) ribose operon repressor%2C RbsR (329 aa)%2C fasta scores opt: 646 z-score: 726.9 E(): 0 35.9%25 identity in 334 aa overlap and Streptomyces coelicolor TR:Q9Z509 (EMBL:AL035591)  transcriptional regulator (LacI family) SCC54.16 (368 aa)%2C fasta scores opt: 659 z-score: 740.7 E(): 0 39.2%25 identity in 337 aa overlap. Contains a Pfam matches to entries PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family. Also contains a Prosite hit to PS00356 Bacterial regulatory proteins%2C lacI family signature. A helix-turn-helix motif situated between residues 5..26 (+6.47 SD);gbkey=CDS;gene=SCF43.17c;product=LacI family transcriptional regulator;protein_id=NP_625107.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	853457	854185	.	-	.	ID=id916;Dbxref=GeneID:1096229;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 139.80%2C E-value 4.8e-38;gbkey=misc_feature;gene=SCF43.17c
NC_003888.3	RefSeq	sequence_feature	854276	854359	.	-	.	ID=id917;Dbxref=GeneID:1096229;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 37.10%2C E-value 5.4e-09;gbkey=misc_feature;gene=SCF43.17c
NC_003888.3	RefSeq	sequence_feature	854291	854347	.	-	.	ID=id918;Dbxref=GeneID:1096229;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCF43.17c
NC_003888.3	RefSeq	ribosome_entry_site	854375	854380	.	-	.	ID=id919;gbkey=RBS
NC_003888.3	RefSeq	gene	854455	854775	.	-	.	ID=gene793;Dbxref=GeneID:1096230;Name=SCF43.18c;gbkey=Gene;gene=SCF43.18c;gene_biotype=protein_coding;gene_synonym=SCF43.18c;locus_tag=SCO0807
NC_003888.3	RefSeq	CDS	854455	854775	.	-	0	ID=cds773;Parent=gene793;Dbxref=Genbank:NP_625108.1,GeneID:1096230;Name=NP_625108.1;Note=SCF43.18c%2C unknown%2C len: 107 aa. Highly similar to several proteins of unknown function e.g. Escherichia coli SW:YIIL_ECOLI(EMBL:L19201) hypothetical 12.3 KD protein YiiL (104 aa)%2C fasta scores opt: 174 z-score: 248.9 E(): 1.8e-06 31.1%25 identity in 106 aa overlap and Bacillus subtilis TR:O05263(EMBL:Z93938) hypothetical 12.6 KD protein YulD (104 aa)%2C fasta scores opt: 254 z-score: 355.8 E(): 1.9e-12 43.4%25 identity in 106 aa overlap.;gbkey=CDS;gene=SCF43.18c;product=hypothetical protein;protein_id=NP_625108.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	854785	854788	.	-	.	ID=id920;gbkey=RBS
NC_003888.3	RefSeq	gene	854802	855884	.	-	.	ID=gene794;Dbxref=GeneID:1096231;Name=SCF43.19c;gbkey=Gene;gene=SCF43.19c;gene_biotype=protein_coding;gene_synonym=SCF43.19c;locus_tag=SCO0808
NC_003888.3	RefSeq	CDS	854802	855884	.	-	0	ID=cds774;Parent=gene794;Dbxref=Genbank:NP_625109.1,GeneID:1096231;Name=NP_625109.1;Note=SCF43.19c%2C possible  solute-binding lipoprotein%2C len: 360 aa. Similar to many bacterial extracellular solute-binding proteins including: Bacillus subtilis SW:RBSB_BACSU(EMBL:Z92953) D-ribose-binding protein precursor%2C RbsB (305 aa)%2C fasta scores opt: 234 z-score: 252.1 E(): 1.2e-06 24.9%25 identity in 277 aa overlap and Streptomyces coelicolor TR:CAB56679(EMBL:AL121596) possible  solute-binding lipoprotein SCF51A.27 (359 aa)%2C fasta scores opt: 1487 z-score: 1547.8 E(): 0 63.1%25 identity in 360 aa overlap. Contains an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCF43.19c;product=solute-binding lipoprotein;protein_id=NP_625109.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	855807	855839	.	-	.	ID=id921;Dbxref=GeneID:1096231;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCF43.19c
NC_003888.3	RefSeq	gene	856126	857139	.	-	.	ID=gene795;Dbxref=GeneID:1096232;Name=SCF43.20c;gbkey=Gene;gene=SCF43.20c;gene_biotype=protein_coding;gene_synonym=SCF43.20c;locus_tag=SCO0809
NC_003888.3	RefSeq	CDS	856126	857139	.	-	0	ID=cds775;Parent=gene795;Dbxref=Genbank:NP_625110.1,GeneID:1096232;Name=NP_625110.1;Note=SCF43.20c. possible ABC transporter permease%2C len: 337 aa. Similar to many permeases e.g. Bacillus subtilis SW:RBSC_BACSU(EMBL:Z25798) ribose transport system permease RbsC (323 aa)%2C fasta scores opt: 561 z-score: 603.2 E(): 3.3e-26 33.9%25 identity in 295 aa overlap. Also similar to the adjoining CDS%2C SCF43.21c%2C possible ABC transporter permease (346 aa)%2C fasta scores opt: 545 z-score: 528.3 E(): 5e-24 33.4%25 identity in 335 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF43.20c;product=ABC transporter permease;protein_id=NP_625110.1;transl_table=11
NC_003888.3	RefSeq	gene	857132	858172	.	-	.	ID=gene796;Dbxref=GeneID:1096233;Name=SCF43.21c;gbkey=Gene;gene=SCF43.21c;gene_biotype=protein_coding;gene_synonym=SCF43.21c;locus_tag=SCO0810
NC_003888.3	RefSeq	CDS	857132	858172	.	-	0	ID=cds776;Parent=gene796;Dbxref=Genbank:NP_625111.1,GeneID:1096233;Name=NP_625111.1;Note=SCF43.21c. possible ABC transporter permease%2C len: 346 aa. Similar to many permeases e.g. Bacillus subtilis SW:RBSC_BACSU(EMBL:Z25798) ribose transport system permease RbsC (323 aa)%2C fasta scores opt: 591 z-score: 644.0 E(): 1.7e-28 33.4%25 identity in 302 aa overlap and Escherichia coli SW:RBSC_ECOLI(EMBL:L10328) ribose transport system permease RbsC (321 aa)%2C fasta scores opt: 596 z-score: 649.4 E(): 8.6e-29 34.5%25 identity in 304 aa overlap. Also similar to the adjoining CDS%2C SCF43.20c%2C possible ABC transporter permease (346 aa)%2C fasta scores opt: 545 z-score: 528.3 E(): 5e-24 33.4%25 identity in 335 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCF43.21c;product=ABC transporter permease;protein_id=NP_625111.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	857150	857153	.	-	.	ID=id922;Dbxref=GeneID:1096233;gbkey=RBS;gene=SCF43.21c
NC_003888.3	RefSeq	gene	858169	859686	.	-	.	ID=gene797;Dbxref=GeneID:1096234;Name=SCF43.22c;gbkey=Gene;gene=SCF43.22c;gene_biotype=protein_coding;gene_synonym=SCF43.22c,SCF43A.01c;locus_tag=SCO0811
NC_003888.3	RefSeq	CDS	858169	859686	.	-	0	ID=cds777;Parent=gene797;Dbxref=Genbank:NP_733516.1,GeneID:1096234;Name=NP_733516.1;Note=SCF43A.01c%2C probable ABC transporter ATP-binding protein%2C partial CDS%2C len: >104 aa%3B similar to many e.g. SW:ARAG_ECOLI (EMBL:X06091)%2C araG%2C Escherichia coli L-arabinose transport ATP-binding protein (504 aa)%2C fasta scores%3B opt: 305 z-score: 368.0 E(): 3.6e-13%2C 45.8%25 identity in 96 aa overlap. Similar to many others from S.coelicolor e.g. TR:O50504 (EMBL:AL009199) S.coelicolor probable ABC-transport system ATP binding protein (260 aa) (55.2%25 identity in 96 aa overlap). Contains Pfam match to PF00005 ABC_tran%2C ABC transporter and PS00017 ATP/GTP-binding site motif A (P-loop)~SCF43.22c%2C possible ABC transporter%2C ATP-binding component%2C partial CDS%2C len: > 434 aa. Highly similar to many including: Escherichia coli SW:RBSA_ECOLI(EMBL:M13169) ribose transport ATP-binding protein RbsA (501 aa)%2C fasta scores opt: 1301 z-score: 1408.5 E(): 0 45.7%25 identity in 431 aa overlap and Streptomyces coelicolor TR:O69942(EMBL:AL023862) ABC transporter ATP-binding protein SC3F9.02 (505 aa)%2C fasta scores opt: 1179 z-score: 978.7 E():0 46.0%25 identity in 428 aa overlap. Contains 2x Pfam matches to entry PF00005 ABC_tran%2C ABC transporter and a Prosite hit to PS00211 ABC transporters family signature.;gbkey=CDS;gene=SCF43.22c;product=ABC transporter ATP-binding protein;protein_id=NP_733516.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	858181	858185	.	-	.	ID=id923;Dbxref=GeneID:1096234;gbkey=RBS;gene=SCF43.22c
NC_003888.3	RefSeq	sequence_feature	858250	858828	.	-	.	ID=id924;Dbxref=GeneID:1096234;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 111.90%2C E-value 1.2e-29;gbkey=misc_feature;gene=SCF43.22c
NC_003888.3	RefSeq	sequence_feature	858433	858477	.	-	.	ID=id925;Dbxref=GeneID:1096234;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF43.22c
NC_003888.3	RefSeq	sequence_feature	859012	859470	.	-	.	ID=id926;Dbxref=GeneID:1096234;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 56.10%2C E-value 7.4e-13;gbkey=misc_feature;gene=SCF43.22c
NC_003888.3	RefSeq	sequence_feature	859531	859554	.	-	.	ID=id927;Dbxref=GeneID:1096234;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF43.22c
NC_003888.3	RefSeq	ribosome_entry_site	859951	859955	.	+	.	ID=id928;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	859963	861123	.	+	.	ID=gene798;Dbxref=GeneID:1096235;Name=SCF43A.02;gbkey=Gene;gene=SCF43A.02;gene_biotype=protein_coding;gene_synonym=SCF43A.02;locus_tag=SCO0812
NC_003888.3	RefSeq	CDS	859963	861123	.	+	0	ID=cds778;Parent=gene798;Dbxref=Genbank:NP_625112.1,GeneID:1096235;Name=NP_625112.1;Note=SCF43A.02%2C possible sugar isomerase%2C len: 386 aa%3B weakly similar to many xylose isomerases (divergent at N- and C-termini) e.g. SW:XYLA_AMPSP (EMBL:M15050)%2C XylA%2C Ampullariella sp. xylose isomerase (394 aa)%2C fasta scores%3B opt: 189 z-score: 229.6 E(): 1.8e-05%2C 26.9%25 identity in 219 aa overlap;gbkey=CDS;gene=SCF43A.02;product=sugar isomerase;protein_id=NP_625112.1;transl_table=11
NC_003888.3	RefSeq	gene	861242	863281	.	+	.	ID=gene799;Dbxref=GeneID:1096236;Name=SCF43A.03;gbkey=Gene;gene=SCF43A.03;gene_biotype=protein_coding;gene_synonym=SCF43A.03;locus_tag=SCO0813
NC_003888.3	RefSeq	CDS	861242	863281	.	+	0	ID=cds779;Parent=gene799;Dbxref=Genbank:NP_625113.1,GeneID:1096236;Name=NP_625113.1;Note=SCF43A.03%2C probable oxidoreductase%2C len: 679 aa%3B similar to many members of the short-chain dehydrogenase/reductase family e.g. SW:YUXG_BACSU (EMBL:Z93938) Bacillus subtilis hypothetical oxidoreductase (689 aa)%2C fasta scores%3B opt: 1727 z-score: 1840.8 E(): 0%2C 40.3%25 identity in 677 aa overlap. C-terminal half is similar to acetoin dehydrogenases e.g. SW:BUDC_KLEPN (EMBL:D86412)%2C BudC%2C Klebsiella pneumoniae acetoin (diacetyl) reductase (256 aa) (35.7%25 identity in 258 aa overlap). C-terminal half is similar to dehydrogenases from S. coelicolor e.g. TR:O88068 (EMBL:AL031541) S.coelicolor probable dehydrogenase (260 aa) (34.3%25 identity in 268 aa overlap). Contains probable coiled-coil from 307 to 334 (28 residues) (Max score: 1.492%2C probability 0.94). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=SCF43A.03;product=short chain dehydrogenase;protein_id=NP_625113.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	862502	863059	.	+	.	ID=id929;Dbxref=GeneID:1096236;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 197.80%2C E-value 1.7e-55;gbkey=misc_feature;gene=SCF43A.03
NC_003888.3	RefSeq	gene	863278	864732	.	+	.	ID=gene800;Dbxref=GeneID:1096237;Name=SCF43A.04;gbkey=Gene;gene=SCF43A.04;gene_biotype=protein_coding;gene_synonym=SCF43A.04;locus_tag=SCO0814
NC_003888.3	RefSeq	CDS	863278	864732	.	+	0	ID=cds780;Parent=gene800;Dbxref=Genbank:NP_625114.1,GeneID:1096237;Name=NP_625114.1;Note=SCF43A.04%2C probable rhamnose kinase%2C len: 484 aa%3B similar to rhamnose kinases e.g. SW:RHAB_ECOLI (EMBL:L19201)%2C rhaB%2C Escherichia coli rhamnulokinase (489 aa)%2C fasta scores%3B opt: 1136 z-score: 1280.7 E(): 0%2C 41.5%25 identity in 468 aa overlap. Also similar to many other carbohydrate kinases e.g. SW:FUCK_ECOLI (EMBL:X15025)%2C fucK%2C Escherichia coli L-fuculokinase (482 aa) (27.7%25 identity in 411 aa overlap). Contains Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases;gbkey=CDS;gene=SCF43A.04;product=rhamnose kinase;protein_id=NP_625114.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	863533	864009	.	+	.	ID=id930;Dbxref=GeneID:1096237;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C score 82.80%2C E-value 7.1e-21;gbkey=misc_feature;gene=SCF43A.04
NC_003888.3	RefSeq	gene	864811	865563	.	+	.	ID=gene801;Dbxref=GeneID:1096238;Name=SCF43A.05;gbkey=Gene;gene=SCF43A.05;gene_biotype=protein_coding;gene_synonym=SCF43A.05;locus_tag=SCO0815
NC_003888.3	RefSeq	CDS	864811	865563	.	+	0	ID=cds781;Parent=gene801;Dbxref=Genbank:NP_625115.1,GeneID:1096238;Name=NP_625115.1;Note=SCF43A.05%2C conserved hypothetical protein%2C len: 250 aa%3B unknown function%2C similar to other hypothetical proteins e.g. TR:O07020 (EMBL:Z94043) Bacillus subtilis hypothetical protein (238 aa)%2C fasta scores%3B opt: 720 z-score: 887.0 E(): 0%2C 46.1%25 identity in 245 aa overlap. Also similar to the C-terminal half of many Fe-S proteins e.g. SW:GLPC_ECOLI (EMBL:M20938)%2C glpC%2C Escherichia coli anaerobic glycerol-3-phosphate dehydrogenase subunit C (396 aa) (26.7%25 identity in 255 aa overlap);gbkey=CDS;gene=SCF43A.05;product=hypothetical protein;protein_id=NP_625115.1;transl_table=11
NC_003888.3	RefSeq	gene	865560	867038	.	+	.	ID=gene802;Dbxref=GeneID:1096239;Name=SCF43A.06;gbkey=Gene;gene=SCF43A.06;gene_biotype=protein_coding;gene_synonym=SCF43A.06;locus_tag=SCO0816
NC_003888.3	RefSeq	CDS	865560	867038	.	+	0	ID=cds782;Parent=gene802;Dbxref=Genbank:NP_625116.1,GeneID:1096239;Name=NP_625116.1;Note=SCF43A.06%2C conserved possible iron-sulfur protein%2C len: 492 aa%3B similar to several iron-sulfur proteins e.g. SW:YKGF_ECOLI (EMBL:AE000137) Escherichia coli hypothetical protein (475 aa)%2C fasta scores%3B opt: 1148 z-score: 1249.5 E(): 0%2C 39.7%25 identity in 481 aa overlap%2C which contains 2 4Fe-4S centres. Contains PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=SCF43A.06;product=iron-sulfur protein;protein_id=NP_625116.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	866511	866546	.	+	.	ID=id931;Dbxref=GeneID:1096239;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SCF43A.06
NC_003888.3	RefSeq	gene	867035	867682	.	+	.	ID=gene803;Dbxref=GeneID:1096240;Name=SCF43A.07;gbkey=Gene;gene=SCF43A.07;gene_biotype=protein_coding;gene_synonym=SCF43A.07;locus_tag=SCO0817
NC_003888.3	RefSeq	CDS	867035	867682	.	+	0	ID=cds783;Parent=gene803;Dbxref=Genbank:NP_625117.1,GeneID:1096240;Name=NP_625117.1;Note=SCF43A.07%2C hypothetical protein%2C len: 215 aa%3B unknown function%2C weakly similar to TR:O32259 (EMBL:Z99121) Bacillus subtilis hypothetical protein (240 aa)%2C fasta scores%3B opt: 185 z-score: 226.3 E(): 2.9e-05%2C 27.6%25 identity in 232 aa overlap and to TR:Q9RT57 (EMBL:AE002030) Deinococcus radiodurans conserved hypothetical protein DR1909%2C 212 aa%2C fasta scores: opt: 490 Z-score: 562.1 E(): 1.1e-23%3B 46.893%25 identity in 177 aa overlap;gbkey=CDS;gene=SCF43A.07;product=hypothetical protein;protein_id=NP_625117.1;transl_table=11
NC_003888.3	RefSeq	gene	867800	868594	.	+	.	ID=gene804;Dbxref=GeneID:1096241;Name=SCF43A.08;gbkey=Gene;gene=SCF43A.08;gene_biotype=protein_coding;gene_synonym=SCF43A.08;locus_tag=SCO0818
NC_003888.3	RefSeq	CDS	867800	868594	.	+	0	ID=cds784;Parent=gene804;Dbxref=Genbank:NP_625118.1,GeneID:1096241;Name=NP_625118.1;Note=SCF43A.08%2C probable ABC transporter ATP-binding protein%2C len: 264 aa%3B similar to many hypothetical ABC transporter ATP-binding proteins e.g. TR:O28803 (EMBL:AE001001) Archaeoglobus fulgidus ABC transporter ATP-binding protein (226 aa)%2C fasta scores%3B opt: 675 z-score: 764.2 E(): 0%2C 48.2%25 identity in 220 aa overlap. Alternative start codons are present at codons 2 and 4. Similar to many from S.coelicolor e.g. TR:O54136 (EMBL:AL021530) S.coelicolor probable ABC-transporter ATP binding protein (230 aa) (44.5%25 identity in 218 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF43A.08;product=ABC transporter ATP-binding protein;protein_id=NP_625118.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	867950	868504	.	+	.	ID=id932;Dbxref=GeneID:1096241;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 223.10%2C E-value 4.2e-63;gbkey=misc_feature;gene=SCF43A.08
NC_003888.3	RefSeq	sequence_feature	867971	867994	.	+	.	ID=id933;Dbxref=GeneID:1096241;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF43A.08
NC_003888.3	RefSeq	sequence_feature	868277	868321	.	+	.	ID=id934;Dbxref=GeneID:1096241;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCF43A.08
NC_003888.3	RefSeq	gene	868598	869908	.	+	.	ID=gene805;Dbxref=GeneID:1096242;Name=SCF43A.09;gbkey=Gene;gene=SCF43A.09;gene_biotype=protein_coding;gene_synonym=SCF43A.09;locus_tag=SCO0819
NC_003888.3	RefSeq	CDS	868598	869908	.	+	0	ID=cds785;Parent=gene805;Dbxref=Genbank:NP_625119.1,GeneID:1096242;Name=NP_625119.1;Note=SCF43A.09%2C possible transmembrane transport protein%2C len: 436 aa%3B probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains hydrophobic%2C possible membrane-spanning regions. Very weak similarity to TR:O54193 (EMBL:AL021411)%2C cbiM%2C S.coelicolor probable membrane protein (452 aa)%2C fasta scores%3B opt: 139 z-score: 131.9 E(): 0.033%2C 27.8%25 identity in 331 aa overlap. May be involved in membrane transport in association with its upstream neighbour which resembles an ABC-tranporter ATP-binding protein;gbkey=CDS;gene=SCF43A.09;product=transmembrane transport protein;protein_id=NP_625119.1;transl_table=11
NC_003888.3	RefSeq	gene	869978	870337	.	-	.	ID=gene806;Dbxref=GeneID:1096243;Name=SCF43A.10c;gbkey=Gene;gene=SCF43A.10c;gene_biotype=protein_coding;gene_synonym=SCF43A.10c;locus_tag=SCO0820
NC_003888.3	RefSeq	CDS	869978	870337	.	-	0	ID=cds786;Parent=gene806;Dbxref=Genbank:NP_625120.1,GeneID:1096243;Name=NP_625120.1;Note=SCF43A.10c%2C unknown%2C len: 119 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCF43A.10c;product=hypothetical protein;protein_id=NP_625120.1;transl_table=11
NC_003888.3	RefSeq	gene	870420	871397	.	-	.	ID=gene807;Dbxref=GeneID:1096244;Name=SCF43A.11c;gbkey=Gene;gene=SCF43A.11c;gene_biotype=protein_coding;gene_synonym=SCF43A.11c;locus_tag=SCO0821
NC_003888.3	RefSeq	CDS	870420	871397	.	-	0	ID=cds787;Parent=gene807;Dbxref=Genbank:NP_625121.1,GeneID:1096244;Name=NP_625121.1;Note=SCF43A.11c%2C probable threonine dehydratase%2C len: 325 aa%3B similar to many threonine dehydratases e.g. SW:THD2_ECOLI (EMBL:M21312)%2C tdcB%2C Escherichia coli threonine dehydratase catabolic (329 aa)%2C fasta scores%3B opt: 815 z-score: 885.6 E(): 0%2C 42.1%25 identity in 318 aa overlap. Similarity to SW:YKV8_YEAST (EMBL:X75951) Saccharomyces cerevisiae threonine dehydratase homologue (326 aa) is slightly higher (52.9%25 identity in 312 aa overlap). Contains Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzymes and PS00165 Ser/Thr dehydratases pyridoxal-phosphate attachment site;gbkey=CDS;gene=SCF43A.11c;product=threonine dehydratase;protein_id=NP_625121.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	870438	871340	.	-	.	ID=id935;Dbxref=GeneID:1096244;Note=Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzymes%2C score 354.60%2C E-value 1.1e-102;gbkey=misc_feature;gene=SCF43A.11c
NC_003888.3	RefSeq	sequence_feature	871215	871256	.	-	.	ID=id936;Dbxref=GeneID:1096244;Note=PS00165 Ser/Thr dehydratases pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SCF43A.11c
NC_003888.3	RefSeq	gene	871406	872086	.	-	.	ID=gene808;Dbxref=GeneID:1096245;Name=SCF43A.12c;gbkey=Gene;gene=SCF43A.12c;gene_biotype=protein_coding;gene_synonym=SCF43A.12c;locus_tag=SCO0822
NC_003888.3	RefSeq	CDS	871406	872086	.	-	0	ID=cds788;Parent=gene808;Dbxref=Genbank:NP_625122.1,GeneID:1096245;Name=NP_625122.1;Note=SCF43A.12c%2C possible DNA-binding protein%2C len: 226 aa%3B unknown function%2C weakly similar to SW:YHEO_HAEIN (EMBL:U32739) Haemophilus influenzae hypothetical protein (221 aa)%2C fasta scores%3B opt: 294 z-score: 349.4 E(): 4e-12%2C 25.9%25 identity in 216 aa overlap and SW:YHEO_ECOLI (EMBL:U18997) Escherichia coli hypothetical protein (240 aa) (24.7%25 identity in 223 aa overlap). C-terminal half shows similarity to TR:Q9Z594 (EMBL:AL035478) S.coelicolor possible DNA-binding protein (122 aa) (38.8%25 identity in 80 aa overlap). Contains probable helix-turn-helix motif at aa 193-214 (Score 1406%2C +3.98 SD);gbkey=CDS;gene=SCF43A.12c;product=DNA-binding protein;protein_id=NP_625122.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	872181	872186	.	+	.	ID=id937;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	872181	872186	.	-	.	ID=id938;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	872193	872633	.	+	.	ID=gene809;Dbxref=GeneID:1096246;Name=SCF43A.13;gbkey=Gene;gene=SCF43A.13;gene_biotype=protein_coding;gene_synonym=SCF43A.13;locus_tag=SCO0823
NC_003888.3	RefSeq	CDS	872193	872633	.	+	0	ID=cds789;Parent=gene809;Dbxref=Genbank:NP_625123.1,GeneID:1096246;Name=NP_625123.1;Note=SCF43A.13%2C probable gntR-family transcriptional regulator%2C len: 146 aa%3B weakly similar to transcriptional regulators e.g. TR:Q07191 (EMBL:Z19589)%2C KorSA%2C Streptomyces ambofaciens plasmid pSAM2 transcriptional regulator protein (259 aa)%2C fasta scores%3B opt: 159 z-score: 203.8 E(): 0.00051%2C 32.3%25 identity in 99 aa overlap. Similar to SW:YHCF_BACSU (EMBL:X96983) Bacillus subtilis hypothetical transcriptional regulator (121 aa) (36.8%25 identity in 106 aa overlap). Weakly similar to others from S.coelicolor e.g. SCGD3.13 on cosmid GD3%2C probable gntR-family transcriptional regulator (115 aa) (32.1%25 identity in 112 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCF43A.13;product=GntR family transcriptional regulator;protein_id=NP_625123.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	872256	872435	.	+	.	ID=id939;Dbxref=GeneID:1096246;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 40.00%2C E-value 8.2e-11;gbkey=misc_feature;gene=SCF43A.13
NC_003888.3	RefSeq	gene	872630	873520	.	+	.	ID=gene810;Dbxref=GeneID:1096247;Name=SCF43A.14;gbkey=Gene;gene=SCF43A.14;gene_biotype=protein_coding;gene_synonym=SCF43A.14;locus_tag=SCO0824
NC_003888.3	RefSeq	CDS	872630	873520	.	+	0	ID=cds790;Parent=gene810;Dbxref=Genbank:NP_625124.1,GeneID:1096247;Name=NP_625124.1;Note=SCF43A.14%2C probable ABC transporter ATP-binding protein%2C len: 296 aa%3B similar to many e.g. SW:NOSF_PSEST (EMBL:X53676)%2C nosF%2C Pseudomonas stutzeri copper transport ATP-binding protein (308 aa)%2C fasta scores%3B opt: 375 z-score: 445.1 E(): 1.8e-17%2C 36.8%25 identity in 223 aa overlap (divergent at the C-terminus). Similar to many from S.coelicolor e.g. SCE7.06c (EMBL:AL049819) probable ABC transporter ATP-binding subunit (276 aa) (40.7%25 identity in 231 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCF43A.14;product=ABC transporter ATP-binding protein;protein_id=NP_625124.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	872738	873265	.	+	.	ID=id940;Dbxref=GeneID:1096247;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 162.80%2C E-value 5.9e-45;gbkey=misc_feature;gene=SCF43A.14
NC_003888.3	RefSeq	sequence_feature	872759	872782	.	+	.	ID=id941;Dbxref=GeneID:1096247;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCF43A.14
NC_003888.3	RefSeq	gene	873517	874473	.	+	.	ID=gene811;Dbxref=GeneID:1096248;Name=SCF43A.15;gbkey=Gene;gene=SCF43A.15;gene_biotype=protein_coding;gene_synonym=SCF43A.15;locus_tag=SCO0825
NC_003888.3	RefSeq	CDS	873517	874473	.	+	0	ID=cds791;Parent=gene811;Dbxref=Genbank:NP_625125.1,GeneID:1096248;Name=NP_625125.1;Note=SCF43A.15%2C possible transmembrane transport protein%2C len: 318 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains hydrophobic%2C possible membrane-spanning regions. May be involved in membrane transport in association with its upstream neighbour which resembles an ABC-tranporter ATP-binding protein;gbkey=CDS;gene=SCF43A.15;product=transmembrane transport protein;protein_id=NP_625125.1;transl_table=11
NC_003888.3	RefSeq	gene	874543	875343	.	+	.	ID=gene812;Dbxref=GeneID:1096249;Name=SCF43A.16;gbkey=Gene;gene=SCF43A.16;gene_biotype=protein_coding;gene_synonym=SCF43A.16;locus_tag=SCO0826
NC_003888.3	RefSeq	CDS	874543	875343	.	+	0	ID=cds792;Parent=gene812;Dbxref=Genbank:NP_625126.1,GeneID:1096249;Name=NP_625126.1;Note=SCF43A.16%2C hypothetical protein%2C len: 266 aa%3B unknown function%2C shares short internal regions of similarity with several methyltransferases e.g. TR:O82434 (EMBL:AF053766) Nicotiana tabacum S-adenosyl-methionine cycloartenol-C24-methyltransferase (349 aa)%2C fasta scores%3B opt: 165 z-score: 206.0 E(): 0.00038%2C 29.8%25 identity in 104 aa overlap. Weakly similar to part of SC1E6.19C (EMBL:AL033505) S.coelicolor hypothetical protein (273 aa) (35.1%25 identity in 131 aa overlap);gbkey=CDS;gene=SCF43A.16;product=hypothetical protein;protein_id=NP_625126.1;transl_table=11
NC_003888.3	RefSeq	gene	875388	875726	.	-	.	ID=gene813;Dbxref=GeneID:1096250;Name=SCF43A.17c;gbkey=Gene;gene=SCF43A.17c;gene_biotype=protein_coding;gene_synonym=SCF43A.17c;locus_tag=SCO0827
NC_003888.3	RefSeq	CDS	875388	875726	.	-	0	ID=cds793;Parent=gene813;Dbxref=Genbank:NP_625127.1,GeneID:1096250;Name=NP_625127.1;Note=SCF43A.17c%2C unknown%2C len: 112 aa%3B unknown function%2C probable CDS suggested by GC frameplot and amino acid composition;gbkey=CDS;gene=SCF43A.17c;product=hypothetical protein;protein_id=NP_625127.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	875736	875741	.	-	.	ID=id942;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	875839	877500	.	+	.	ID=gene814;Dbxref=GeneID:1096251;Name=SCF43A.18;gbkey=Gene;gene=SCF43A.18;gene_biotype=protein_coding;gene_synonym=SCF43A.18;locus_tag=SCO0828
NC_003888.3	RefSeq	CDS	875839	877500	.	+	0	ID=cds794;Parent=gene814;Dbxref=Genbank:NP_625128.1,GeneID:1096251;Name=NP_625128.1;Note=SCF43A.18%2C probable alkaline phosphatase%2C len: 553 aa%3B similar to SW:PPBD_BACSU (EMBL:U49060)%2C PhoD%2C Bacillus subtilis alkaline phosphatase D precursor (556 aa)%2C fasta scores%3B opt: 1512 z-score: 1782.1 E(): 0%2C 47.8%25 identity in 485 aa overlap;gbkey=CDS;gene=SCF43A.18;product=alkaline phosphatase;protein_id=NP_625128.1;transl_table=11
NC_003888.3	RefSeq	gene	877702	879078	.	+	.	ID=gene815;Dbxref=GeneID:1096252;Name=SCF43A.19;gbkey=Gene;gene=SCF43A.19;gene_biotype=protein_coding;gene_synonym=SCF43A.19;locus_tag=SCO0829
NC_003888.3	RefSeq	CDS	877702	879078	.	+	0	ID=cds795;Parent=gene815;Dbxref=Genbank:NP_625129.1,GeneID:1096252;Name=NP_625129.1;Note=SCF43A.19%2C probable  serine protease%2C len: 458 aa%3B similar to many serine proteases e.g. SW:PRTC_STRGR (EMBL:L29018)%2C SprC%2C Streptomyces griseus serine protease C precursor (457 aa)%2C fasta scores%3B opt: 1563 z-score: 1510.8 E(): 0%2C 54.1%25 identity in 449 aa overlap. Both have a C-terminal region similar to part of some chitinases e.g. SW:CHI1_BACCI (EMBL:M57601)%2C chiA1%2C Bacillus circulans chitinase A1 precursor%2C which is not found in the other similar serine proteases. The Thr/Pro-rich 19-amino acid linker region previously identified in SW:PRTC_STRGR is shortened in the S.coelicolor homologue. Contains probable N-terminal signal sequence. Weakly similar to TR:O54109 (EMBL:AL021529) S.coelicolor probable  protease (411 aa) (29.4%25 identity in 418 aa overlap). Contains Pfam match to entry PF00089 trypsin%2C Trypsin and PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=CDS;gene=SCF43A.19;product=serine protease;protein_id=NP_625129.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	878326	878862	.	+	.	ID=id943;Dbxref=GeneID:1096252;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 1.00%2C E-value 9.3e-05;gbkey=misc_feature;gene=SCF43A.19
NC_003888.3	RefSeq	sequence_feature	878734	878769	.	+	.	ID=id944;Dbxref=GeneID:1096252;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=misc_feature;gene=SCF43A.19
NC_003888.3	RefSeq	gene	879140	880219	.	-	.	ID=gene816;Dbxref=GeneID:1096253;Name=SCF43A.20c;gbkey=Gene;gene=SCF43A.20c;gene_biotype=protein_coding;gene_synonym=SCF43A.20c;locus_tag=SCO0830
NC_003888.3	RefSeq	CDS	879140	880219	.	-	0	ID=cds796;Parent=gene816;Dbxref=Genbank:NP_625130.1,GeneID:1096253;Name=NP_625130.1;Note=SCF43A.20c%2C possible penicillin-binding protein%2C len: 359 aa%3B weakly similar to penicillin-binding proteins%2C carboxypeptidases and beta-lactamases e.g. SW:AMPH_ECOLI (EMBL:AE000144)%2C AmpH%2C Escherichia coli penicillin-binding protein (376 aa)%2C fasta scores%3B opt: 274 z-score: 305.5 E(): 1.1e-09%2C 26.5%25 identity in 343 aa overlap%2C SW:DAC_STRSQ (EMBL:M26842) Streptomyces sp. D-alanyl-D-alanine carboxypeptidase precursor (406 aa) (23.8%25 identity in 344 aa overlap) and SW:AMPC_PSEAE (EMBL:X54719)%2C AmpC%2C Pseudomonas aeruginosa beta-lactamase precursor (397 aa) (27.3%25 identity in 381 aa overlap). Weakly similar to others from S. coelicolor e.g. TR:O86739 (EMBL:AL031035) S. coelicolor probable  peptidase (386 aa) (26.6%25 identity in 369 aa overlap) and SCH24.34 (EMBL:AL049826) S. coelicolor possible beta-lactamase (461 aa) (31.4%25 identity in 325 aa overlap);gbkey=CDS;gene=SCF43A.20c;product=penicillin-binding protein;protein_id=NP_625130.1;transl_table=11
NC_003888.3	RefSeq	gene	880216	881136	.	-	.	ID=gene817;Dbxref=GeneID:1096254;Name=SCF43A.21c;gbkey=Gene;gene=SCF43A.21c;gene_biotype=protein_coding;gene_synonym=SCF43A.21c;locus_tag=SCO0831
NC_003888.3	RefSeq	CDS	880216	881136	.	-	0	ID=cds797;Parent=gene817;Dbxref=Genbank:NP_625131.1,GeneID:1096254;Name=NP_625131.1;Note=SCF43A.21c%2C hypothetical protein%2C len: 306 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Similar to the adjacent protein SCF43A.22c%2C hypothetical protein (321 aa)%2C fasta scores%3B opt: 674 z-score: 697.3 E(): 1.1e-33%2C 41.3%25 identity in 300 aa overlap;gbkey=CDS;gene=SCF43A.21c;product=hypothetical protein;protein_id=NP_625131.1;transl_table=11
NC_003888.3	RefSeq	gene	881133	882098	.	-	.	ID=gene818;Dbxref=GeneID:1096255;Name=SCF43A.22c;gbkey=Gene;gene=SCF43A.22c;gene_biotype=protein_coding;gene_synonym=SCF43A.22c;locus_tag=SCO0832
NC_003888.3	RefSeq	CDS	881133	882098	.	-	0	ID=cds798;Parent=gene818;Dbxref=Genbank:NP_625132.1,GeneID:1096255;Name=NP_625132.1;Note=SCF43A.22c%2C hypothetical protein%2C len: 321 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Similar to the adjacent protein SCF43A.21c%2C hypothetical protein (306 aa)%2C fasta scores%3B opt: 674 z-score: 666.6 E(): 5.5e-32%2C 41.3%25 identity in 300 aa overlap;gbkey=CDS;gene=SCF43A.22c;product=hypothetical protein;protein_id=NP_625132.1;transl_table=11
NC_003888.3	RefSeq	gene	882095	882805	.	-	.	ID=gene819;Dbxref=GeneID:1096256;Name=SCF43A.23c;gbkey=Gene;gene=SCF43A.23c;gene_biotype=protein_coding;gene_synonym=SCF43A.23c;locus_tag=SCO0833
NC_003888.3	RefSeq	CDS	882095	882805	.	-	0	ID=cds799;Parent=gene819;Dbxref=Genbank:NP_625133.1,GeneID:1096256;Name=NP_625133.1;Note=SCF43A.23c%2C unknown%2C len: 236 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCF43A.23c;product=hypothetical protein;protein_id=NP_625133.1;transl_table=11
NC_003888.3	RefSeq	gene	882826	883014	.	-	.	ID=gene820;Dbxref=GeneID:1096257;Name=SCF43A.24c;gbkey=Gene;gene=SCF43A.24c;gene_biotype=protein_coding;gene_synonym=SCF43A.24c;locus_tag=SCO0834
NC_003888.3	RefSeq	CDS	882826	883014	.	-	0	ID=cds800;Parent=gene820;Dbxref=Genbank:NP_625134.1,GeneID:1096257;Name=NP_625134.1;Note=SCF43A.24c%2C unknown%2C len: 62 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. An alternative start codon is present at codon 7%2C but without an apparent RBS;gbkey=CDS;gene=SCF43A.24c;product=hypothetical protein;protein_id=NP_625134.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	883023	883026	.	-	.	ID=id945;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	883113	883760	.	-	.	ID=gene821;Dbxref=GeneID:1096258;Name=SCF43A.25c;gbkey=Gene;gene=SCF43A.25c;gene_biotype=protein_coding;gene_synonym=SCF43A.25c;locus_tag=SCO0835
NC_003888.3	RefSeq	CDS	883113	883760	.	-	0	ID=cds801;Parent=gene821;Dbxref=Genbank:NP_625135.1,GeneID:1096258;Name=NP_625135.1;Note=SCF43A.25c%2C possible methyltransferase%2C len: 215 aa%3B weakly similar to methyltransferases e.g. SW:UBIG_ECOLI (EMBL:Y00544)%2C UbiG%2C Escherichia coli 3-demethylubiquinone-9 3-methyltransferase (240 aa)%2C fasta scores%3B opt: 206 z-score: 249.1 E(): 1.5e-06%2C 31.1%25 identity in 148 aa overlap and TR:Q53137 (EMBL:L21196)%2C CobL%2C Rhodococcus erythropolis methyltransferase/decarboxylase (447 aa) (40.6%25 identity in 138 aa overlap);gbkey=CDS;gene=SCF43A.25c;product=methyltransferase;protein_id=NP_625135.1;transl_table=11
NC_003888.3	RefSeq	gene	883920	884921	.	-	.	ID=gene822;Dbxref=GeneID:1096259;Name=SCF43A.26c;gbkey=Gene;gene=SCF43A.26c;gene_biotype=protein_coding;gene_synonym=SCF43A.26c;locus_tag=SCO0836
NC_003888.3	RefSeq	CDS	883920	884921	.	-	0	ID=cds802;Parent=gene822;Dbxref=Genbank:NP_625136.1,GeneID:1096259;Name=NP_625136.1;Note=SCF43A.26c%2C conserved possible membrane protein%2C len: 333 aa%3B unknown function%2C similar to (or to part of) many hypothetical proteins of different sizes e.g. TR:Q55987 (EMBL:D64005) Synechocystis sp. hypothetical protein (617 aa)%2C fasta scores%3B opt: 581 z-score: 633.2 E(): 6.2e-28%2C 40.1%25 identity in 232 aa overlap and TR:O05781 (EMBL:Z95150) Mycobacterium tuberculosis hypothetical protein (308 aa) (34.9%25 identity in 301 aa overlap). Contains hydrophobic%2C possible membrane-spanning region. Contains Pfam match to entry PF00924 UPF0003%2C Uncharacterized protein family UPF0003;gbkey=CDS;gene=SCF43A.26c;product=hypothetical protein;protein_id=NP_625136.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	883989	884840	.	-	.	ID=id946;Dbxref=GeneID:1096259;Note=Pfam match to entry PF00924 UPF0003%2C Uncharacterized protein family UPF0003%2C score 13.50%2C E-value 1.2e-08;gbkey=misc_feature;gene=SCF43A.26c
NC_003888.3	RefSeq	gene	885004	885270	.	-	.	ID=gene823;Dbxref=GeneID:1096260;Name=SCF43A.27c;gbkey=Gene;gene=SCF43A.27c;gene_biotype=protein_coding;gene_synonym=SCF43A.27c;locus_tag=SCO0837
NC_003888.3	RefSeq	CDS	885004	885270	.	-	0	ID=cds803;Parent=gene823;Dbxref=Genbank:NP_625137.1,GeneID:1096260;Name=NP_625137.1;Note=SCF43A.27c%2C unknown%2C len: 88 aa%3B unknown function%2C improbable Pro/Gln-rich CDS suggested by weak GC frameplot%2C positional base preference and amino acid composition scores;gbkey=CDS;gene=SCF43A.27c;product=hypothetical protein;protein_id=NP_625137.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	885280	885283	.	-	.	ID=id947;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	885432	885436	.	+	.	ID=id948;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	885442	885867	.	+	.	ID=gene824;Dbxref=GeneID:1096261;Name=SCF43A.28;gbkey=Gene;gene=SCF43A.28;gene_biotype=protein_coding;gene_synonym=SCF43A.28;locus_tag=SCO0838
NC_003888.3	RefSeq	CDS	885442	885867	.	+	0	ID=cds804;Parent=gene824;Dbxref=Genbank:NP_625138.1,GeneID:1096261;Name=NP_625138.1;Note=SCF43A.28%2C conserved hypothetical protein%2C len: 141 aa%3B unknown function%2C similar to SW:YY13_MYCTU (EMBL:Z73966) Mycobacterium tuberculosis hypothetical protein (137 aa)%2C fasta scores%3B opt: 393 z-score: 495.0 E(): 3.1e-20%2C 52.9%25 identity in 121 aa overlap Weakly similar to SC6G9.21 (EMBL:AL079356) S.coelicolor conserved hypothetical protein (144 aa) (35.7%25 identity in 126 aa overlap);gbkey=CDS;gene=SCF43A.28;product=hypothetical protein;protein_id=NP_625138.1;transl_table=11
NC_003888.3	RefSeq	gene	885933	888050	.	-	.	ID=gene825;Dbxref=GeneID:1096262;Name=SCF43A.29c;gbkey=Gene;gene=SCF43A.29c;gene_biotype=protein_coding;gene_synonym=SCF43A.29c;locus_tag=SCO0839
NC_003888.3	RefSeq	CDS	885933	888050	.	-	0	ID=cds805;Parent=gene825;Dbxref=Genbank:NP_625139.1,GeneID:1096262;Name=NP_625139.1;Note=SCF43A.29c%2C probable transmembrane transport protein%2C len: 705 aa%3B similar to TR:Q53902 (EMBL:M64683) S.coelicolor actII ORF3 antibiotic export protein (711 aa)%2C fasta scores%3B opt: 887 z-score: 912.2 E(): 0%2C 45.3%25 identity in 700 aa overlap and to many transporters and hypothetical proteins. Also similar to TR:O54101 (EMBL:AL021529) S.coelicolor probable export protein (847 aa) (37.2%25 identity in 702 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCF43A.29c;product=transmembrane transport protein;protein_id=NP_625139.1;transl_table=11
NC_003888.3	RefSeq	gene	888194	888700	.	-	.	ID=gene826;Dbxref=GeneID:1096263;Name=SCF43A.30c;gbkey=Gene;gene=SCF43A.30c;gene_biotype=protein_coding;gene_synonym=SCF43A.30c;locus_tag=SCO0840
NC_003888.3	RefSeq	CDS	888194	888700	.	-	0	ID=cds806;Parent=gene826;Dbxref=Genbank:NP_625140.1,GeneID:1096263;Name=NP_625140.1;Note=SCF43A.30c%2C possible marR-family transcriptional regulator%2C len: 168 aa%3B weakly similar to several transcriptional regulators e.g. SW:PECS_ERWCH (EMBL:X74409)%2C PecS%2C Erwinia chrysanthemi regulator of pectinase%2C cellulase%2C and blue pigment production (166 aa)%2C fasta scores%3B opt: 125 z-score: 166.0 E(): 0.064%2C 29.2%25 identity in 89 aa overlap. Also similar to hypothetical proteins e.g. TR:O31472 (EMBL:Z99105) Bacillus subtilis hypothetical protein (155 aa) (35.4%25 identity in 144 aa overlap). Contains Pfam match to PF01047 MarR%2C MarR family Score 30.03;gbkey=CDS;gene=SCF43A.30c;product=MarR family transcriptional regulator;protein_id=NP_625140.1;transl_table=11
NC_003888.3	RefSeq	gene	888805	890367	.	+	.	ID=gene827;Dbxref=GeneID:1096264;Name=SCF43A.31;gbkey=Gene;gene=SCF43A.31;gene_biotype=protein_coding;gene_synonym=SCF43A.31;locus_tag=SCO0841
NC_003888.3	RefSeq	CDS	888805	890367	.	+	0	ID=cds807;Parent=gene827;Dbxref=Genbank:NP_625141.1,GeneID:1096264;Name=NP_625141.1;Note=SCF43A.31%2C possible oxidoreductase%2C len: 520 aa%3B weakly similar to some oxidoreductases e.g. SW:NUEM_BOVIN (EMBL:X59418) Bos taurus NADH-ubiquinone oxidoreductase 39 kD subunit precursor (380 aa)%2C fasta scores%3B opt: 288 z-score: 319.2 E(): 1.9e-10%2C 23.8%25 identity in 286 aa overlap. Also similar to hypothetical proteins e.g. SW:YBJT_ECOLI (EMBL:AE000188) Escherichia coli hypothetical protein (476 aa) (32.2%25 identity in 490 aa overlap). The N-terminal half is similar to TR:O54156 (EMBL:AL021409) S.coelicolor probable oxidoreductase (347 aa) (31.7%25 identity in 287 aa overlap);gbkey=CDS;gene=SCF43A.31;product=oxidoreductase;protein_id=NP_625141.1;transl_table=11
NC_003888.3	RefSeq	gene	890835	892211	.	+	.	ID=gene828;Dbxref=GeneID:1096265;Name=phr;gbkey=Gene;gene=phr;gene_biotype=protein_coding;gene_synonym=phr,SCF43A.32;locus_tag=SCO0842
NC_003888.3	RefSeq	CDS	890835	892211	.	+	0	ID=cds808;Parent=gene828;Dbxref=Genbank:NP_625142.1,GeneID:1096265;Name=NP_625142.1;Note=SCF43A.32%2C phr%2C probable deoxyribodipyrimidine photolyase%2C len: 458 aa%3B highly similar to many deoxyribodipyrimidine photolyases e.g. SW:PHR_STRGR (EMBL:X15060)%2C phr%2C Streptomyces griseus deoxyribodipyrimidine photolyases (455 aa)%2C fasta scores%3B opt: 2043 z-score: 1879.8 E(): 0%2C 67.1%25 identity in 459 aa overlap. Contains Pfam match to entry PF00875 DNA_photolyase%2C DNA photolyase%2C PS00394 DNA photolyases class 1 signature 1 and PS00691 DNA photolyases class 1 signature 2;gbkey=CDS;gene=phr;product=deoxyribodipyrimidine photolyase;protein_id=NP_625142.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	890844	892178	.	+	.	ID=id949;Dbxref=GeneID:1096265;Note=Pfam match to entry PF00875 DNA_photolyase%2C DNA photolyase%2C score 494.80%2C E-value 6.7e-145;gbkey=misc_feature;gene=phr
NC_003888.3	RefSeq	sequence_feature	891768	891806	.	+	.	ID=id950;Dbxref=GeneID:1096265;Note=PS00394 DNA photolyases class 1 signature 1;gbkey=misc_feature;gene=phr
NC_003888.3	RefSeq	sequence_feature	891828	891887	.	+	.	ID=id951;Dbxref=GeneID:1096265;Note=PS00691 DNA photolyases class 1 signature 2;gbkey=misc_feature;gene=phr
NC_003888.3	RefSeq	gene	892238	892672	.	-	.	ID=gene829;Dbxref=GeneID:1096266;Name=SCF43A.33c;gbkey=Gene;gene=SCF43A.33c;gene_biotype=protein_coding;gene_synonym=SCF43A.33c;locus_tag=SCO0843
NC_003888.3	RefSeq	CDS	892238	892672	.	-	0	ID=cds809;Parent=gene829;Dbxref=Genbank:NP_625143.1,GeneID:1096266;Name=NP_625143.1;Note=SCF43A.33c%2C unknown%2C len: 144 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCF43A.33c;product=hypothetical protein;protein_id=NP_625143.1;transl_table=11
NC_003888.3	RefSeq	gene	892665	893006	.	-	.	ID=gene830;Dbxref=GeneID:1096267;Name=SCF43A.34c;gbkey=Gene;gene=SCF43A.34c;gene_biotype=protein_coding;gene_synonym=SCF43A.34c;locus_tag=SCO0844
NC_003888.3	RefSeq	CDS	892665	893006	.	-	0	ID=cds810;Parent=gene830;Dbxref=Genbank:NP_625144.1,GeneID:1096267;Name=NP_625144.1;Note=SCF43A.34c%2C possible DNA-binding protein%2C len: 113 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains probable helix-turn-helix motif at aa 9-30 (Score 1062%2C +2.80 SD);gbkey=CDS;gene=SCF43A.34c;product=DNA-binding protein;protein_id=NP_625144.1;transl_table=11
NC_003888.3	RefSeq	gene	893013	893279	.	-	.	ID=gene831;Dbxref=GeneID:1096268;Name=SCF43A.35c;gbkey=Gene;gene=SCF43A.35c;gene_biotype=protein_coding;gene_synonym=SCF43A.35c;locus_tag=SCO0845
NC_003888.3	RefSeq	CDS	893013	893279	.	-	0	ID=cds811;Parent=gene831;Dbxref=Genbank:NP_625145.1,GeneID:1096268;Name=NP_625145.1;Note=SCF43A.35c%2C unknown%2C len: 88 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. The N-terminus is rich in basic amino acids%2C while the remainder is rich in Ser/Thr;gbkey=CDS;gene=SCF43A.35c;product=hypothetical protein;protein_id=NP_625145.1;transl_table=11
NC_003888.3	RefSeq	gene	893386	894186	.	+	.	ID=gene832;Dbxref=GeneID:1096269;Name=SCF43A.36;gbkey=Gene;gene=SCF43A.36;gene_biotype=protein_coding;gene_synonym=SCF43A.36;locus_tag=SCO0846
NC_003888.3	RefSeq	CDS	893386	894186	.	+	0	ID=cds812;Parent=gene832;Dbxref=Genbank:NP_625146.1,GeneID:1096269;Name=NP_625146.1;Note=SCF43A.36%2C hypothetical protein%2C len: 266 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCF43A.36;product=hypothetical protein;protein_id=NP_625146.1;transl_table=11
NC_003888.3	RefSeq	gene	894244	894702	.	-	.	ID=gene833;Dbxref=GeneID:1096270;Name=SCF43A.37c;gbkey=Gene;gene=SCF43A.37c;gene_biotype=protein_coding;gene_synonym=SCF43A.37c;locus_tag=SCO0847
NC_003888.3	RefSeq	CDS	894244	894702	.	-	0	ID=cds813;Parent=gene833;Dbxref=Genbank:NP_625147.1,GeneID:1096270;Name=NP_625147.1;Note=SCF43A.37c%2C possible lyase%2C len: 152 aa%3B weakly similar to many lactoylglutathione lyases e.g. SW:LGUL_SALTY (EMBL:U57364)%2C GloA%2C Salmonella typhimurium lactoylglutathione lyase (135 aa)%2C fasta scores%3B opt: 133 z-score: 175.2 E(): 0.02%2C 28.7%25 identity in 136 aa overlap. Weakly similar to SCI7.11c (EMBL:AL096743) S.coelicolor possible lyase (130 aa) (28.3%25 identity in 127 aa overlap). An alternative start codon is present at codon 3;gbkey=CDS;gene=SCF43A.37c;product=lyase;protein_id=NP_625147.1;transl_table=11
NC_003888.3	RefSeq	gene	894818	895819	.	-	.	ID=gene834;Dbxref=GeneID:1096271;Name=SCM2.01c;gbkey=Gene;gene=SCM2.01c;gene_biotype=protein_coding;gene_synonym=SCM2.01c;locus_tag=SCO0848
NC_003888.3	RefSeq	CDS	894818	895819	.	-	0	ID=cds814;Parent=gene834;Dbxref=Genbank:NP_625148.1,GeneID:1096271;Name=NP_625148.1;Note=SCM2.01c%2C possible oxidoreductase%2C len: 333 aa. Similar to many including several from eukaryotes e.g. Mus musculus (Mouse) SW:QOR_MOUSE(EMBL:S70056) quinone oxidoreductase (EC 1.6.5.5) (331 aa)%2C fasta scores opt: 499 z-score: 508.7 E(): 5.9e-21 30.5%25 identity in 331 aa overlap. Also similar to several from Prokaryotes e.g. Streptomyces coelicolor TR:Q53927(EMBL:X62373) hydroxyacyl-CoA dehydrogenase involved in actinorhodin biosynthesis (329 aa)%2C fasta scores opt: 481 z-score: 490.8 E(): 5.8e-20 35.8%25 identity in 338 aa overlap. Contains a Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=CDS;gene=SCM2.01c;product=oxidoreductase;protein_id=NP_625148.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	894827	895777	.	-	.	ID=id952;Dbxref=GeneID:1096271;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score -3.00%2C E-value 1.4e-09;gbkey=misc_feature;gene=SCM2.01c
NC_003888.3	RefSeq	gene	895829	896353	.	-	.	ID=gene835;Dbxref=GeneID:1096272;Name=SCM2.02c;gbkey=Gene;gene=SCM2.02c;gene_biotype=protein_coding;gene_synonym=SCM2.02c;locus_tag=SCO0849
NC_003888.3	RefSeq	CDS	895829	896353	.	-	0	ID=cds815;Parent=gene835;Dbxref=Genbank:NP_625149.1,GeneID:1096272;Name=NP_625149.1;Note=SCM2.02c%2C possible membrane protein%2C len: 174 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCM2.02c;product=hypothetical protein;protein_id=NP_625149.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	896533	896537	.	+	.	ID=id953;gbkey=RBS
NC_003888.3	RefSeq	gene	896543	896968	.	+	.	ID=gene836;Dbxref=GeneID:1096273;Name=SCM2.03;gbkey=Gene;gene=SCM2.03;gene_biotype=protein_coding;gene_synonym=SCM2.03;locus_tag=SCO0850
NC_003888.3	RefSeq	CDS	896543	896968	.	+	0	ID=cds816;Parent=gene836;Dbxref=Genbank:NP_625150.1,GeneID:1096273;Name=NP_625150.1;Note=SCM2.03%2C possible membrane protein%2C len: 141 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCM2.03;product=hypothetical protein;protein_id=NP_625150.1;transl_table=11
NC_003888.3	RefSeq	gene	896973	898037	.	-	.	ID=gene837;Dbxref=GeneID:1096274;Name=SCM2.04c;gbkey=Gene;gene=SCM2.04c;gene_biotype=protein_coding;gene_synonym=SCM2.04c;locus_tag=SCO0851
NC_003888.3	RefSeq	CDS	896973	898037	.	-	0	ID=cds817;Parent=gene837;Dbxref=Genbank:NP_625151.1,GeneID:1096274;Name=NP_625151.1;Note=SCM2.04c%2C possible PfkB-family carbohydrate kinase%2C len: 354 aa. Similar to many carbohydrate kinases including Bacillus subtilis SW:KDGK_BACSU(EMBL:L47838) 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) KdgK (324 aa)%2C fasta scores opt: 497 z-score: 554.8 E(): 1.6e-23 35.0%25 identity in 311 aa overlap and Bacillus stearothermophilus TR:Q9ZFM1(EMBL:AF098273) 2-keto-3-deoxy-gluconate kinase (314 aa)%2C fasta scores opt: 541 z-score: 603.5 E(): 3.1e-26 36.7%25 identity in 308 aa overlap. Contains a Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase.;gbkey=CDS;gene=SCM2.04c;product=PfkB-family carbohydrate kinase;protein_id=NP_625151.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	897153	897839	.	-	.	ID=id954;Dbxref=GeneID:1096274;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 64.40%2C E-value 2.7e-19;gbkey=misc_feature;gene=SCM2.04c
NC_003888.3	RefSeq	gene	898034	898666	.	-	.	ID=gene838;Dbxref=GeneID:1096275;Name=SCM2.05c;gbkey=Gene;gene=SCM2.05c;gene_biotype=protein_coding;gene_synonym=SCM2.05c;locus_tag=SCO0852
NC_003888.3	RefSeq	CDS	898034	898666	.	-	0	ID=cds818;Parent=gene838;Dbxref=Genbank:NP_625152.1,GeneID:1096275;Name=NP_625152.1;Note=SCM2.05c%2C possible aldolase%2C len: 210 aa. Similar to Bacillus subtilis SW:ALKH_BACSU (EMBL:L47838) 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) (196 aa)%2C fasta scores opt: 383 z-score: 406.3 E(): 3e-15 38.5%25 identity in 179 aa overlap. Contains a Pfam match to entry PF01081 Aldolase%2C KDPG and KHG aldolase.;gbkey=CDS;gene=SCM2.05c;product=aldolase;protein_id=NP_625152.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	898094	898660	.	-	.	ID=id955;Dbxref=GeneID:1096275;Note=Pfam match to entry PF01081 Aldolase%2C KDPG and KHG aldolase%2C score 79.20%2C E-value 8.3e-20;gbkey=misc_feature;gene=SCM2.05c
NC_003888.3	RefSeq	ribosome_entry_site	898675	898679	.	-	.	ID=id956;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	898883	898889	.	+	.	ID=id957;gbkey=RBS
NC_003888.3	RefSeq	gene	898895	899293	.	+	.	ID=gene839;Dbxref=GeneID:1096276;Name=SCM2.06;gbkey=Gene;gene=SCM2.06;gene_biotype=protein_coding;gene_synonym=SCM2.06;locus_tag=SCO0853
NC_003888.3	RefSeq	CDS	898895	899293	.	+	0	ID=cds819;Parent=gene839;Dbxref=Genbank:NP_625153.1,GeneID:1096276;Name=NP_625153.1;Note=SCM2.06%2C possible membrane protein%2C len: 132 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCM2.06;product=hypothetical protein;protein_id=NP_625153.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	899525	899529	.	+	.	ID=id958;gbkey=RBS
NC_003888.3	RefSeq	gene	899538	902129	.	+	.	ID=gene840;Dbxref=GeneID:1096277;Name=SCM2.07;gbkey=Gene;gene=SCM2.07;gene_biotype=protein_coding;gene_synonym=SCM2.07;locus_tag=SCO0854
NC_003888.3	RefSeq	CDS	899538	902129	.	+	0	ID=cds820;Parent=gene840;Dbxref=Genbank:NP_625154.1,GeneID:1096277;Name=NP_625154.1;Note=SCM2.07%2C unknown%2C len: 863 aa.;gbkey=CDS;gene=SCM2.07;product=hypothetical protein;protein_id=NP_625154.1;transl_table=11
NC_003888.3	RefSeq	gene	902174	902680	.	-	.	ID=gene841;Dbxref=GeneID:1096278;Name=SCM2.08c;gbkey=Gene;gene=SCM2.08c;gene_biotype=protein_coding;gene_synonym=SCM2.08c;locus_tag=SCO0855
NC_003888.3	RefSeq	CDS	902174	902680	.	-	0	ID=cds821;Parent=gene841;Dbxref=Genbank:NP_625155.1,GeneID:1096278;Name=NP_625155.1;Note=SCM2.08c%2C possible acetyltransferase%2C len: 168 aa. Weak similarity to several other acetyltransferases e.g. Streptomyces coelicolor TR:CAB51273 (EMBL:AL096872) acetyltransferase SC5F7.12C (169 aa)%2C fasta scores opt: 121 z-score: 155.1 E(): 0.29 31.3%25 identity in 147 aa overlap. Contains a Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCM2.08c;product=acetyltransferase;protein_id=NP_625155.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	902255	902623	.	-	.	ID=id959;Dbxref=GeneID:1096278;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 29.40%2C E-value 8.3e-05;gbkey=misc_feature;gene=SCM2.08c
NC_003888.3	RefSeq	gene	902743	903969	.	-	.	ID=gene842;Dbxref=GeneID:1096279;Name=SCM2.09c;gbkey=Gene;gene=SCM2.09c;gene_biotype=protein_coding;gene_synonym=SCM2.09c;locus_tag=SCO0856
NC_003888.3	RefSeq	CDS	902743	903969	.	-	0	ID=cds822;Parent=gene842;Dbxref=Genbank:NP_625156.1,GeneID:1096279;Name=NP_625156.1;Note=SCM2.09c possible integral membrane protein%2C len: 408 aa. Contains multiple possible membrane spanning hydrophobic domains. Also contains a TTA /leucine codon%2C which is a possible target for bldA regulation.;gbkey=CDS;gene=SCM2.09c;product=hypothetical protein;protein_id=NP_625156.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	903946	903948	.	-	.	ID=id960;Dbxref=GeneID:1096279;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCM2.09c
NC_003888.3	RefSeq	repeat_region	904101	904155	.	+	.	ID=id961;Note=repeat region containing a 6x CCGG(T/C) repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	904109	904747	.	+	.	ID=gene843;Dbxref=GeneID:1096280;Name=SCM2.10;gbkey=Gene;gene=SCM2.10;gene_biotype=protein_coding;gene_synonym=SCM2.10;locus_tag=SCO0857
NC_003888.3	RefSeq	CDS	904109	904747	.	+	0	ID=cds823;Parent=gene843;Dbxref=Genbank:NP_625157.1,GeneID:1096280;Name=NP_625157.1;Note=SCM2.10%2C possible TetR-family regulator%2C len: 242 aa. Similar to Streptomyces coelicolor TR:Q9X8G9(EMBL:AL049819)  transcriptional regulator SCE7.13c (204 aa)%2C fasta scores opt: 455 z-score: 536.7 E(): 1.6e-22 41.1%25 identity in 202 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and an N-terminal 3x AAG repeat%2C between residues 5..15.;gbkey=CDS;gene=SCM2.10;product=TetR family transcriptional regulator;protein_id=NP_625157.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	904211	904351	.	+	.	ID=id962;Dbxref=GeneID:1096280;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 34.00%2C E-value 1.1e-07;gbkey=misc_feature;gene=SCM2.10
NC_003888.3	RefSeq	gene	905000	905377	.	-	.	ID=gene844;Dbxref=GeneID:1096281;Name=SCM2.11c;gbkey=Gene;gene=SCM2.11c;gene_biotype=protein_coding;gene_synonym=SCM2.11c;locus_tag=SCO0858
NC_003888.3	RefSeq	CDS	905000	905377	.	-	0	ID=cds824;Parent=gene844;Dbxref=Genbank:NP_625158.1,GeneID:1096281;Name=NP_625158.1;Note=SCM2.11c%2C unknown%2C len: 125 aa.;gbkey=CDS;gene=SCM2.11c;product=hypothetical protein;protein_id=NP_625158.1;transl_table=11
NC_003888.3	RefSeq	gene	905546	906055	.	-	.	ID=gene845;Dbxref=GeneID:1096282;Name=SCM2.12c;gbkey=Gene;gene=SCM2.12c;gene_biotype=protein_coding;gene_synonym=SCM2.12c;locus_tag=SCO0859
NC_003888.3	RefSeq	CDS	905546	906055	.	-	0	ID=cds825;Parent=gene845;Dbxref=Genbank:NP_625159.1,GeneID:1096282;Name=NP_625159.1;Note=SCM2.12c%2C possible membrane protein%2C len: 169 aa. . Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCM2.12c;product=hypothetical protein;protein_id=NP_625159.1;transl_table=11
NC_003888.3	RefSeq	gene	906052	908340	.	-	.	ID=gene846;Dbxref=GeneID:1096283;Name=SCM2.13c;gbkey=Gene;gene=SCM2.13c;gene_biotype=protein_coding;gene_synonym=SCM2.13c;locus_tag=SCO0860
NC_003888.3	RefSeq	CDS	906052	908340	.	-	0	ID=cds826;Parent=gene846;Dbxref=Genbank:NP_625160.1,GeneID:1096283;Name=NP_625160.1;Note=SCM2.13c%2C probable cation-transporting ATPase%2C len: 762 aa. Highly similar to many other cation transporters e.g. Enterococcus hirae SW:COPA_ENTHR(EMBL:L13292) copper/potassium-transporting ATPase A (EC 3.6.1.36) (727 aa)%2C fasta scores opt: 1287 z-score: 1275.2 E():0 37.8%25 identity in 749 aa overlap. Contains Prosite hits to PS01047 Heavy-metal-associated domain and PS00154 E1-E2 ATPases phosphorylation site. Also contains Pfam matches to entries PF00122 E1-E2_ATPase%2C E1-E2 ATPase and PF00403 HMA%2C Heavy-metal-associated domain as well as multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCM2.13c;product=cation-transporting ATPase;protein_id=NP_625160.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	906133	907707	.	-	.	ID=id963;Dbxref=GeneID:1096283;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 529.80%2C E-value 1.9e-155;gbkey=misc_feature;gene=SCM2.13c
NC_003888.3	RefSeq	sequence_feature	906997	907017	.	-	.	ID=id964;Dbxref=GeneID:1096283;Note=PS00154 E1-E2 ATPases phosphorylation site;gbkey=misc_feature;gene=SCM2.13c
NC_003888.3	RefSeq	sequence_feature	908209	908295	.	-	.	ID=id965;Dbxref=GeneID:1096283;Note=Pfam match to entry PF00403 HMA%2C Heavy-metal-associated domain%2C score 37.40%2C E-value 1.1e-08;gbkey=misc_feature;gene=SCM2.13c
NC_003888.3	RefSeq	sequence_feature	908212	908295	.	-	.	ID=id966;Dbxref=GeneID:1096283;Note=PS01047 Heavy-metal-associated domain;gbkey=misc_feature;gene=SCM2.13c
NC_003888.3	RefSeq	gene	908340	908549	.	-	.	ID=gene847;Dbxref=GeneID:1096284;Name=SCM2.14c;gbkey=Gene;gene=SCM2.14c;gene_biotype=protein_coding;gene_synonym=SCM2.14c;locus_tag=SCO0861
NC_003888.3	RefSeq	CDS	908340	908549	.	-	0	ID=cds827;Parent=gene847;Dbxref=Genbank:NP_625161.1,GeneID:1096284;Name=NP_625161.1;Note=SCM2.14c%2C hypothetical protein%2C len: 69 aa. Rich in the amino acid Gly. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCM2.14c;product=hypothetical protein;protein_id=NP_625161.1;transl_table=11
NC_003888.3	RefSeq	gene	908813	909472	.	-	.	ID=gene848;Dbxref=GeneID:1096285;Name=SCM2.15c;gbkey=Gene;gene=SCM2.15c;gene_biotype=protein_coding;gene_synonym=SCM2.15c;locus_tag=SCO0862
NC_003888.3	RefSeq	CDS	908813	909472	.	-	0	ID=cds828;Parent=gene848;Dbxref=Genbank:NP_625162.1,GeneID:1096285;Name=NP_625162.1;Note=SCM2.15c%2C possible integral membrane protein%2C len: 219 aa. Similar to a protein of unknown function from Mycobacterium tuberculosis SW:Y970_MYCTU(EMBL:Z79700) hypothetical 22.9 KD protein (210 aa)%2C fasta scores opt: 224 z-score: 235.4 E(): 9.8e-06 30.5%25 identity in 213 aa overlap. Contains possible membrane spanning hydrophobic domains and a a possible N-terminal signal sequence.;gbkey=CDS;gene=SCM2.15c;product=hypothetical protein;protein_id=NP_625162.1;transl_table=11
NC_003888.3	RefSeq	gene	909469	910926	.	-	.	ID=gene849;Dbxref=GeneID:1096286;Name=SCM2.16c;gbkey=Gene;gene=SCM2.16c;gene_biotype=protein_coding;gene_synonym=SCM2.16c;locus_tag=SCO0863
NC_003888.3	RefSeq	CDS	909469	910926	.	-	0	ID=cds829;Parent=gene849;Dbxref=Genbank:NP_625163.1,GeneID:1096286;Name=NP_625163.1;Note=SCM2.16c%2C possible integral membrane protein%2C len: 485 aa. Weakly similar to Pseudomonas aeruginosa TR:P72122(EMBL:D28119) OprC outer membrane protein C (471 aa)%2C fasta scores opt: 256 z-score: 271.9 E(): 9.1e-08 28.5%25 identity in 466 aa overlap and to TR:CAC44337 (EMBL:AL596102) Streptomyces coelicolor integral membrane protein SCBAC19F3.14%2C 517 aa%3B fasta scores: opt: 581 Z-score: 603.9 E(): 5.2e-26%3B 46.076%25 identity in 497 aa overlap. Contains possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCM2.16c;product=hypothetical protein;protein_id=NP_625163.1;transl_table=11
NC_003888.3	RefSeq	gene	911343	911939	.	-	.	ID=gene850;Dbxref=GeneID:1096287;Name=SCM2.17c;gbkey=Gene;gene=SCM2.17c;gene_biotype=protein_coding;gene_synonym=SCM2.17c;locus_tag=SCO0864
NC_003888.3	RefSeq	CDS	911343	911939	.	-	0	ID=cds830;Parent=gene850;Dbxref=Genbank:NP_625164.1,GeneID:1096287;Name=NP_625164.1;Note=SCM2.17c%2C probable ECF-family sigma factor%2C len: 198 aa. Highly similar to many sigma factors including: Streptomyces coelicolor TR:O86856 (EMBL:AJ007313) sigma factor SigT (236 aa)%2C fasta scores opt: 268 z-score: 337.2 E(): 2.1e-11 34.3%25 identity in 181 aa overlap and Mycobacterium tuberculosis SW:RPSC_MYCTU (EMBL:Z73966) probable RNA polymerase sigma-C factor SigC (185 aa)%2C fasta scores opt: 517 z-score: 643.3 E(): 1.9e-28 50.8%25 identity in 177 aa overlap. Note this CDS appears to be a duplicated on this cosmid and shares 68.5 %25 identity%2C in 197 aa overlap%2C with the downstream gene%2C SCM2.19c. Contains a Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily).;gbkey=CDS;gene=SCM2.17c;product=ECF family RNA polymerase sigma factor;protein_id=NP_625164.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	911405	912879	.	-	.	ID=id967;Note=This repeat unit is 66 %25 identical to the repeated region complement(18277..19779).;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	911619	911819	.	-	.	ID=id968;Dbxref=GeneID:1096287;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 67.40%2C E-value 2.9e-16;gbkey=misc_feature;gene=SCM2.17c
NC_003888.3	RefSeq	gene	912092	912862	.	-	.	ID=gene851;Dbxref=GeneID:1096288;Name=SCM2.18c;gbkey=Gene;gene=SCM2.18c;gene_biotype=protein_coding;gene_synonym=SCM2.18c;locus_tag=SCO0865
NC_003888.3	RefSeq	CDS	912092	912862	.	-	0	ID=cds831;Parent=gene851;Dbxref=Genbank:NP_625165.1,GeneID:1096288;Name=NP_625165.1;Note=SCM2.18c%2C possible integral-membrane protein%2C len: 278 aa. Similar to Streptomyces coelicolor TR:CAB51458(EMBL:AL096884)  membrane protein (236 aa)%2C fasta scores opt: 184 z-score: 201.5 E(): 0.00077 31.3%25 identity in 265 aa overlap. Note this CDS appears to be a duplicated on this cosmid and shares 40.6 %25 identity%2C in 256 aa overlap%2C with the downstream gene%2C SCM2.20c. Contains a possible N-terminal signal sequence and possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCM2.18c;product=hypothetical protein;protein_id=NP_625165.1;transl_table=11
NC_003888.3	RefSeq	gene	912931	913572	.	-	.	ID=gene852;Dbxref=GeneID:1096289;Name=SCM2.19c;gbkey=Gene;gene=SCM2.19c;gene_biotype=protein_coding;gene_synonym=SCM2.19c;locus_tag=SCO0866
NC_003888.3	RefSeq	CDS	912931	913572	.	-	0	ID=cds832;Parent=gene852;Dbxref=Genbank:NP_625166.1,GeneID:1096289;Name=NP_625166.1;Note=SCM2.19c%2C probable ECF-family sigma factor%2C len: 213 aa. Highly similar to many sigma factors including: Streptomyces coelicolor TR:O86856 (EMBL:AJ007313) sigma factor SigT (236 aa)%2C fasta scores opt: 292 z-score: 354.1 E(): 2.4e-12 35.7%25 identity in 185 aa overlap and Mycobacterium tuberculosis SW:RPSC_MYCTU( EMBL:Z73966) probable RNA polymerase sigma-C factor SigC (185 aa)%2C fasta scores opt: 530 z-score: 636.2 E(): 4.6e-28 51.7%25 identity in 178 aa overlap. Note this CDS appears to be a duplicated on this cosmid and shares 68.5 %25 identity%2C in 197 aa overlap%2C with the upstream gene%2C SCM2.17c. Note that the predicted product of SCM2.19c is 17 aa longer than that of SCM2.17c. Contains a Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily) and a possible helix-turn-helix motif situated between residues 169..190.;gbkey=CDS;gene=SCM2.19c;product=ECF family RNA polymerase sigma factor;protein_id=NP_625166.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	912987	914489	.	-	.	ID=id969;Note=This repeat unit is 66 %25 identical to the repeated region complement(16695..18169).;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	913198	913401	.	-	.	ID=id970;Dbxref=GeneID:1096289;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 75.90%2C E-value 8.3e-19;gbkey=misc_feature;gene=SCM2.19c
NC_003888.3	RefSeq	ribosome_entry_site	913581	913586	.	-	.	ID=id971;gbkey=RBS
NC_003888.3	RefSeq	gene	913768	914472	.	-	.	ID=gene853;Dbxref=GeneID:1096290;Name=SCM2.20c;gbkey=Gene;gene=SCM2.20c;gene_biotype=protein_coding;gene_synonym=SCM2.20c;locus_tag=SCO0867
NC_003888.3	RefSeq	CDS	913768	914472	.	-	0	ID=cds833;Parent=gene853;Dbxref=Genbank:NP_625167.1,GeneID:1096290;Name=NP_625167.1;Note=SCM2.20c%2C possible integral-membrane protein%2C len: 234 aa. Similar to Streptomyces coelicolor TR:CAB51458(EMBL:AL096884)  membrane protein (236 aa)%2C fasta scores opt: 211 z-score: 247.5 E(): 2.1e-06 28.8%25 identity in 243 aa overlap. Note this CDS appears to be a duplicated on this cosmid and shares 40.6 %25 identity%2C in 256 aa overlap%2C with the upstream gene%2C SCM2.18c. Contains a possible N-terminal signal sequence and possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCM2.20c;product=hypothetical protein;protein_id=NP_625167.1;transl_table=11
NC_003888.3	RefSeq	gene	914827	915270	.	-	.	ID=gene854;Dbxref=GeneID:1096291;Name=SCM1.01c;gbkey=Gene;gene=SCM1.01c;gene_biotype=protein_coding;gene_synonym=SCM1.01c;locus_tag=SCO0868
NC_003888.3	RefSeq	CDS	914827	915270	.	-	0	ID=cds834;Parent=gene854;Dbxref=Genbank:NP_625168.1,GeneID:1096291;Name=NP_625168.1;Note=SCM1.01c%2C possible regulatory protein%2C len: 147 aa. Similar to Streptomyces fradiae TR:Q9Z9I5 (EMBL:AB024056) regulatory protein (139 aa)%2C fasta scores opt: 166 z-score: 217.5 E(): 9.1e-05 30.9%25 identity in 123 aa overlap and Streptomyces coelicolor A3(2) TR:CAB55834 (EMBL:AJ249581) regulator of sig15 (170 aa)%2C fasta scores opt: 157 z-score: 205.1 E(): 0.00044 32.8%25 identity in 119 aa overlap.;gbkey=CDS;gene=SCM1.01c;product=regulatory protein;protein_id=NP_625168.1;transl_table=11
NC_003888.3	RefSeq	gene	915341	915715	.	-	.	ID=gene855;Dbxref=GeneID:1096292;Name=SCM1.02c;gbkey=Gene;gene=SCM1.02c;gene_biotype=protein_coding;gene_synonym=SCM1.02c;locus_tag=SCO0869
NC_003888.3	RefSeq	CDS	915341	915715	.	-	0	ID=cds835;Parent=gene855;Dbxref=Genbank:NP_625169.1,GeneID:1096292;Name=NP_625169.1;Note=SCM1.02c%2C possible anti-sigma factor antagonist%2C len: 124 aa. Weakly similar to several anti anti sigma factors including: Bacillus subtilis SW:SP21_BACSU( EMBL:M17643) anti-sigma F factor antagonist (stage II sporulation protein AA) (116 aa)%2C fasta scores opt: 147 z-score: 204.6 E(): 0.00047 26.6%25 identity in 109 aa overlap and Streptomyces coelicolor A3(2) TR:CAB55835 (EMBL:AJ249581) anti anti sigma factor (125 aa)%2C fasta scores opt: 142 z-score: 197.8 E(): 0.0011 29.8%25 identity in 94 aa overlap. Contains a Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family.;gbkey=CDS;gene=SCM1.02c;product=anti-sigma factor antagonist;protein_id=NP_625169.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	915386	915700	.	-	.	ID=id972;Dbxref=GeneID:1096292;Note=Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family%2C score 40.10%2C E-value 5.1e-08;gbkey=misc_feature;gene=SCM1.02c
NC_003888.3	RefSeq	gene	916336	916785	.	-	.	ID=gene856;Dbxref=GeneID:1096293;Name=SCM1.03c;gbkey=Gene;gene=SCM1.03c;gene_biotype=protein_coding;gene_synonym=SCM1.03c;locus_tag=SCO0870
NC_003888.3	RefSeq	CDS	916336	916785	.	-	0	ID=cds836;Parent=gene856;Dbxref=Genbank:NP_625170.1,GeneID:1096293;Name=NP_625170.1;Note=SCM1.03c%2C probable two-component system response regulator%2C len: 149 aa. Highly similar to the response regulator receiver domains of two-component regulatory proteins including: Synechocystis sp. (strain PCC 6803) TR:P72781(EMBL:D90900) regulatory components of sensory transduction system (282 aa)%2C fasta scores opt: 229 z-score: 290.6 E(): 7.7e-09 31.8%25 identity in 129 aa overlap and Methanobacterium thermoautotrophicum TR:O26545(EMBL:AE000828) sensory transduction regulatory protein (145 aa)%2C fasta scores opt: 422 z-score: 531.6 E(): 2.9e-22 47.2%25 identity in 142 aa overlap. Contains a Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain;gbkey=CDS;gene=SCM1.03c;product=two-component system response regulator;protein_id=NP_625170.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	916393	916761	.	-	.	ID=id973;Dbxref=GeneID:1096293;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 82.60%2C E-value 7.8e-21;gbkey=misc_feature;gene=SCM1.03c
NC_003888.3	RefSeq	gene	916782	918377	.	-	.	ID=gene857;Dbxref=GeneID:1096294;Name=SCM1.04c;gbkey=Gene;gene=SCM1.04c;gene_biotype=protein_coding;gene_synonym=SCM1.04c;locus_tag=SCO0871
NC_003888.3	RefSeq	CDS	916782	918377	.	-	0	ID=cds837;Parent=gene857;Dbxref=Genbank:NP_625171.1,GeneID:1096294;Name=NP_625171.1;Note=SCM1.04c%2C possible two-component sensor protein. Len: 545 aa. Similar%2C in parts%2C to many others including: Methanobacterium thermoautotrophicum TR:O26544(EMBL:AE000828) signal-transducing histidine kinase (373 aa)%2C fasta scores opt: 509 z-score: 548.0 E(): 3.5e-23 34.2%25 identity in 313 aa overlap and Streptomyces coelicolor TR:O88056(EMBL:AL031541) two-component sensor (379 aa)%2C fasta scores opt:350 z-score: 378.5 E(): 9.7e-14 35.6%25 identity in 233 aa overlap. Contains a Pfam matches to entries PF00512 signal%2C Histidine kinase and Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins. Also contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SCM1.04c;product=two-component sensor protein;protein_id=NP_625171.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	916842	917480	.	-	.	ID=id974;Dbxref=GeneID:1096294;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 131.40%2C E-value 1.6e-35;gbkey=misc_feature;gene=SCM1.04c
NC_003888.3	RefSeq	sequence_feature	917604	917813	.	-	.	ID=id975;Dbxref=GeneID:1096294;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 38.90%2C E-value 1.2e-07;gbkey=misc_feature;gene=SCM1.04c
NC_003888.3	RefSeq	gene	918438	919775	.	-	.	ID=gene858;Dbxref=GeneID:1096295;Name=SCM1.05c;gbkey=Gene;gene=SCM1.05c;gene_biotype=protein_coding;gene_synonym=SCM1.05c;locus_tag=SCO0872
NC_003888.3	RefSeq	CDS	918438	919775	.	-	0	ID=cds838;Parent=gene858;Dbxref=Genbank:NP_625172.1,GeneID:1096295;Name=NP_625172.1;Note=SCM1.05c%2C unknown%2C len: 445 aa. Weakly similar to several Streptomyces coelicolor proteins including: TR:O86807(EMBL:AL031031)  regulatory protein SC7C7.02C (916 aa)%2C fasta scores opt: 306 z-score: 336.6 E(): 2.1e-11 30.7%25 identity in 264 aa overlap and TR:CAB59599(EMBL:AL132662) hypothetical regulatory protein SCF11.22 (877 aa)%2C fasta scores opt: 284 z-score: 312.7 E(): 4.5e-10 34.6%25 identity in 243 aa overlap. Contains a Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain.;gbkey=CDS;gene=SCM1.05c;product=hypothetical protein;protein_id=NP_625172.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	919239	919580	.	-	.	ID=id976;Dbxref=GeneID:1096295;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 69.90%2C E-value 5.3e-17;gbkey=misc_feature;gene=SCM1.05c
NC_003888.3	RefSeq	gene	919901	920182	.	-	.	ID=gene859;Dbxref=GeneID:1096296;Name=SCM1.06c;gbkey=Gene;gene=SCM1.06c;gene_biotype=protein_coding;gene_synonym=SCM1.06c;locus_tag=SCO0873
NC_003888.3	RefSeq	CDS	919901	920182	.	-	0	ID=cds839;Parent=gene859;Dbxref=Genbank:NP_625173.1,GeneID:1096296;Name=NP_625173.1;Note=SCM1.06c%2C doubtful CDS%2C len: 93 aa.;gbkey=CDS;gene=SCM1.06c;product=hypothetical protein;protein_id=NP_625173.1;transl_table=11
NC_003888.3	RefSeq	gene	920727	921419	.	-	.	ID=gene860;Dbxref=GeneID:1096297;Name=SCM1.07c;gbkey=Gene;gene=SCM1.07c;gene_biotype=protein_coding;gene_synonym=SCM1.07c;locus_tag=SCO0874
NC_003888.3	RefSeq	CDS	920727	921419	.	-	0	ID=cds840;Parent=gene860;Dbxref=Genbank:NP_625174.1,GeneID:1096297;Name=NP_625174.1;Note=SCM1.07c%2C possible integral membrane protein%2C len: 230 aa. Highly similar to Streptomyces coelicolor TR:Q9X897(EMBL:AL049645) integral membrane protein SCE2.02c (234 aa)%2C fasta scores opt: 1217 z-score: 1265.3 E():0 82.8%25 identity in 233 aa overlap. Also weakly similar to several other proteins of undefined function e.g. Mycobacterium tuberculosis TR:P96876(EMBL:Z92771) hypothetical 23.6 KD protein (222 aa)%2C fasta scores opt: 360 z-score: 447.3 E(): 1.4e-17 33.8%25 identity in 195 aa overlap. Contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCM1.07c;product=hypothetical protein;protein_id=NP_625174.1;transl_table=11
NC_003888.3	RefSeq	gene	921420	921755	.	-	.	ID=gene861;Dbxref=GeneID:1096298;Name=SCM1.08c;gbkey=Gene;gene=SCM1.08c;gene_biotype=protein_coding;gene_synonym=SCM1.08c;locus_tag=SCO0875
NC_003888.3	RefSeq	CDS	921420	921755	.	-	0	ID=cds841;Parent=gene861;Dbxref=Genbank:NP_625175.1,GeneID:1096298;Name=NP_625175.1;Note=SCM1.08c%2C possible ArsR-family transcriptional regulatory protein%2C len: 111 aa. Highly similar to several transcriptional regulatory proteins e.g. Streptomyces lividans SW:MERR_STRLI(EMBL:X65467) probable mercury resistance operon repressor MerR (125 aa)%2C fasta scores opt: 198 z-score: 268.8 E(): 1.3e-07 36.9%25 identity in 103 aa overlap and Mycobacterium tuberculosis SW:YJ94_MYCTU(EMBL:Z74025) hypothetical transcriptional regulator (118 aa)%2C fasta scores opt: 338 z-score: 448.4 E(): 1.2e-17 55.4%25 identity in 92 aa overlap. Also highly similar to Streptomyces coelicolor TR:Q9X898(EMBL:AL049645) transcriptional regulator SCE2.03C (111 aa)%2C fasta scores opt: 672 z-score: 876.4 E():0 90.1%25 identity in 111 aa overlap. Contains a Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family and a helix-turn-helix motif situated between residues 35..56 (+3.29 SD).;gbkey=CDS;gene=SCM1.08c;product=transcription regulator ArsR;protein_id=NP_625175.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	921480	921713	.	-	.	ID=id977;Dbxref=GeneID:1096298;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 70.00%2C E-value 4.8e-17;gbkey=misc_feature;gene=SCM1.08c
NC_003888.3	RefSeq	gene	921927	922175	.	-	.	ID=gene862;Dbxref=GeneID:1096299;Name=SCM1.09c;gbkey=Gene;gene=SCM1.09c;gene_biotype=protein_coding;gene_synonym=SCM1.09c;locus_tag=SCO0876
NC_003888.3	RefSeq	CDS	921927	922175	.	-	0	ID=cds842;Parent=gene862;Dbxref=Genbank:NP_625176.1,GeneID:1096299;Name=NP_625176.1;Note=SCM1.09c%2C unknown%2C len: 82 aa.;gbkey=CDS;gene=SCM1.09c;product=hypothetical protein;protein_id=NP_625176.1;transl_table=11
NC_003888.3	RefSeq	gene	922247	924913	.	+	.	ID=gene863;Dbxref=GeneID:1096300;Name=SCM1.10;gbkey=Gene;gene=SCM1.10;gene_biotype=protein_coding;gene_synonym=SCM1.10;locus_tag=SCO0877
NC_003888.3	RefSeq	CDS	922247	924913	.	+	0	ID=cds843;Parent=gene863;Dbxref=Genbank:NP_625177.1,GeneID:1096300;Name=NP_625177.1;Note=SCM1.10%2C possible transcriptional regulatory protein%2C len: 888 aa. Highly similar to many e.g. Streptomyces hygroscopicus TR:Q54307 (EMBL:X86780) regulator of cholesterol oxidase (872 aa)%2C fasta scores opt: 259 z-score: 271.6 E(): 8.8e-08 29.3%25 identity in 916 aa overlap and Streptomyces coelicolor TR:CAB52359 (EMBL:AL109747) probable transcriptional regulator SCJ21.13 (919 aa)%2C fasta scores opt: 780 z-score: 819.1 E():0 37.5%25 identity in 918 aa overlap. Contains a Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible membrane spanning hydrophobic domains. Contains a helix-turn-helix motif situated between residues 836..857 (+4.18 SD);gbkey=CDS;gene=SCM1.10;product=transcriptional regulator;protein_id=NP_625177.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	922337	922360	.	+	.	ID=id978;Dbxref=GeneID:1096300;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCM1.10
NC_003888.3	RefSeq	sequence_feature	924698	924895	.	+	.	ID=id979;Dbxref=GeneID:1096300;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 78.10%2C E-value 1.9e-19;gbkey=misc_feature;gene=SCM1.10
NC_003888.3	RefSeq	gene	924917	925795	.	+	.	ID=gene864;Dbxref=GeneID:1096301;Name=SCM1.11;gbkey=Gene;gene=SCM1.11;gene_biotype=protein_coding;gene_synonym=SCM1.11;locus_tag=SCO0878
NC_003888.3	RefSeq	CDS	924917	925795	.	+	0	ID=cds844;Parent=gene864;Dbxref=Genbank:NP_625178.1,GeneID:1096301;Name=NP_625178.1;Note=SCM1.11%2C possible hydrolase%2C len: 292 aa. Highly similar to several including: Streptomyces peucetius TR:Q54809(EMBL:L40425) 10-carbomethoxy-13-deoxycarminomycin esterase (298 aa)%2C fasta scores opt: 670 z-score: 757.9 E():0 40.3%25 identity in 288 aa overlap and Streptomyces purpurascens TR:Q54528(EMBL:U10405:) possible C-C hydrolase%2C RdmC (298 aa) fasta scores opt: 709 z-score: 801.6 E():0 41.2%25 identity in 289 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SCM1.11;product=hydrolase;protein_id=NP_625178.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	925049	925789	.	+	.	ID=id980;Dbxref=GeneID:1096301;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 75.60%2C E-value 1e-18;gbkey=misc_feature;gene=SCM1.11
NC_003888.3	RefSeq	gene	925792	926569	.	+	.	ID=gene865;Dbxref=GeneID:1096302;Name=SCM1.12.;gbkey=Gene;gene=SCM1.12.;gene_biotype=pseudogene;gene_synonym=SCM1.12.;locus_tag=SCO0879;pseudo=true
NC_003888.3	RefSeq	sequence_feature	925792	926569	.	+	.	ID=id981;Dbxref=GeneID:1096302;Note=SCM1.12%2C ABC-transport protein%2C ATP-binding domain%2C pseudogene%2C len: 259 aa. Gene fragment that is similar to Escherichia coli SW:YBHF_ECOLI(EMBL:AE000181) hypothetical ABC transporter ATP-binding protein (578 aa). This gene fragment also has a possible frame shift in the sequence after residue 143%2C nucleotide position 11413. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).%3BABC-transport protein%2C ATP-binding domain (pseudogene).;gbkey=misc_feature;gene=SCM1.12.
NC_003888.3	RefSeq	sequence_feature	925936	925959	.	+	.	ID=id982;Dbxref=GeneID:1096302;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCM1.12.
NC_003888.3	RefSeq	gene	926916	927332	.	+	.	ID=gene866;Dbxref=GeneID:1096303;Name=SCM1.13;gbkey=Gene;gene=SCM1.13;gene_biotype=protein_coding;gene_synonym=SCM1.13;locus_tag=SCO0880
NC_003888.3	RefSeq	CDS	926916	927332	.	+	0	ID=cds845;Parent=gene866;Dbxref=Genbank:NP_625179.1,GeneID:1096303;Name=NP_625179.1;Note=SCM1.13%2C possible membrane protein%2C len: 138 aa. Contains a possible membrane spanning hydrophobic domain and an N-terminal signal sequence.;gbkey=CDS;gene=SCM1.13;product=hypothetical protein;protein_id=NP_625179.1;transl_table=11
NC_003888.3	RefSeq	gene	927534	928499	.	-	.	ID=gene867;Dbxref=GeneID:1096304;Name=SCM1.14c;gbkey=Gene;gene=SCM1.14c;gene_biotype=protein_coding;gene_synonym=SCM1.14c;locus_tag=SCO0881
NC_003888.3	RefSeq	CDS	927534	928499	.	-	0	ID=cds846;Parent=gene867;Dbxref=Genbank:NP_625180.1,GeneID:1096304;Name=NP_625180.1;Note=SCM1.14c%2C unknown%2C len: 321 aa. Highly similar to another protein of undefined function from Streptomyces coelicolor TR:CAB56728(EMBL:AL121600) hypothetical 34.3 KD protein SCF76.08C (325 aa)%2C fasta scores opt: 978 z-score: 1133.4 E(): 0 47.2%25 identity in 326 aa overlap;gbkey=CDS;gene=SCM1.14c;product=hypothetical protein;protein_id=NP_625180.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	928659	928664	.	+	.	ID=id983;gbkey=RBS
NC_003888.3	RefSeq	gene	928670	929017	.	+	.	ID=gene868;Dbxref=GeneID:1096305;Name=SCM1.15;gbkey=Gene;gene=SCM1.15;gene_biotype=protein_coding;gene_synonym=SCM1.15;locus_tag=SCO0882
NC_003888.3	RefSeq	CDS	928670	929017	.	+	0	ID=cds847;Parent=gene868;Dbxref=Genbank:NP_625181.1,GeneID:1096305;Name=NP_625181.1;Note=SCM1.15%2C unknown%2C len: 115 aa. Highly similar to another protein of undefined function from Streptomyces coelicolor TR:CAB52051(EMBL:AL109732) hypothetical 14.0 KD protein SC7H2.09c (126 aa)%2C fasta scores opt: 234 z-score: 312.6 E(): 4.6e-10 41.8%25 identity in 91 aa overlap.;gbkey=CDS;gene=SCM1.15;product=hypothetical protein;protein_id=NP_625181.1;transl_table=11
NC_003888.3	RefSeq	gene	929061	929717	.	+	.	ID=gene869;Dbxref=GeneID:1096306;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;gene_synonym=SCM1.16;locus_tag=SCO0883
NC_003888.3	RefSeq	CDS	929061	929717	.	+	0	ID=cds848;Parent=gene869;Dbxref=Genbank:NP_625182.1,GeneID:1096306;Name=NP_625182.1;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+);gbkey=CDS;gene=def;product=peptide deformylase;protein_id=NP_625182.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	929133	929594	.	+	.	ID=id984;Dbxref=GeneID:1096306;Note=Pfam match to entry PF01327 Pep_deformylase%2C Polypeptide deformylase%2C score 119.30%2C E-value 7.2e-32;gbkey=misc_feature;gene=def
NC_003888.3	RefSeq	gene	929779	931212	.	-	.	ID=gene870;Dbxref=GeneID:1096307;Name=SCM1.17c;gbkey=Gene;gene=SCM1.17c;gene_biotype=protein_coding;gene_synonym=SCM1.17c;locus_tag=SCO0884
NC_003888.3	RefSeq	CDS	929779	931212	.	-	0	ID=cds849;Parent=gene870;Dbxref=Genbank:NP_625183.1,GeneID:1096307;Name=NP_625183.1;Note=SCM1.17c%2C probable oxidoreductase%2C len: 477 aa. Highly similar to many mercuric reductases (EC 1.16.1.1) and to dihydrolipoamide dehydrogenases (EC 1.8.1.4)(both enzyme classes belong to the pyridine nucleotide-disulfide oxidoreductases class-I family): Mycobacterium tuberculosis TR:O07268(EMBL:AL021959) mercuric reductase (499 aa)%2C fasta scores opt: 2030 z-score: 2133.1 E():0 63.2%25 identity in 476 aa overlap and Synechocystis sp. (strain PCC 6803) SW:DLDH_SYNY3(EMBL:D90900) dihydrolipoamide dehydrogenase (EC 1.8.1.4) (473 aa)%2C fasta scores opt: 586 z-score: 619.8 E(): 3.5e-27 29.0%25 identity in 497 aa overlap. Also highly similar to Streptomyces coelicolor TR:Q9X8C3(EMBL:AL049763) pyridine nucleotide-disulfide oxidoreductase SCE36.10C (454 aa)%2C fasta scores opt: 774 z-score: 650.9 E(): 7e-31 40.3%25 identity in 472 aa overlap. Note that the length of this CDS is more consistent with the dihydrolipoamide dehydrogenases than the mercuric reductases. Contains a Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase class-I.;gbkey=CDS;gene=SCM1.17c;product=oxidoreductase;protein_id=NP_625183.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	929794	931182	.	-	.	ID=id985;Dbxref=GeneID:1096307;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase class-I%2C score 153.20%2C E-value 4.4e-42;gbkey=misc_feature;gene=SCM1.17c
NC_003888.3	RefSeq	gene	931333	931737	.	+	.	ID=gene871;Dbxref=GeneID:1096308;Name=SCM1.18;gbkey=Gene;gene=SCM1.18;gene_biotype=protein_coding;gene_synonym=SCM1.18,trxA3;locus_tag=SCO0885
NC_003888.3	RefSeq	CDS	931333	931737	.	+	0	ID=cds850;Parent=gene871;Dbxref=Genbank:NP_625184.1,GeneID:1096308;Name=NP_625184.1;Note=SCM1.18%2C trxA3%2C thioredoxin%2C len: 134 aa. Highly similar to many thioredoxins e.g. Escherichia coli SW:THI2_ECOLI (EMBL:U85942) thioredoxin 2 (Trx2) (139 aa)%2C fasta scores opt: 280 z-score: 337.5 E(): 1.9e-11 41.6%25 identity in 101 aa overlap. Also similar to Streptomyces coelicolor TR:CAB42711 (EMBL:AL049826) thioredoxin TrxA%2C SCH24.11C (110 aa)%2C fasta scores opt: 224 z-score: 263.9 E(): 2.5e-09 38.7%25 identity in 93 aa overlap. Contains a Prosite hit to PS00194 Thioredoxin family active site and a Pfam match to entry PF00085 thiored%2C Thioredoxin.;gbkey=CDS;gene=SCM1.18;product=thioredoxin;protein_id=NP_625184.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	931333	931572	.	+	.	ID=id986;Dbxref=GeneID:1096308;Note=Pfam match to entry PF00085 thiored%2C Thioredoxin%2C score 120.70%2C E-value 4.4e-35;gbkey=misc_feature;gene=SCM1.18
NC_003888.3	RefSeq	sequence_feature	931399	931455	.	+	.	ID=id987;Dbxref=GeneID:1096308;Note=PS00194 Thioredoxin family active site;gbkey=misc_feature;gene=SCM1.18
NC_003888.3	RefSeq	gene	931757	932791	.	-	.	ID=gene872;Dbxref=GeneID:1096309;Name=SCM1.19c;gbkey=Gene;gene=SCM1.19c;gene_biotype=protein_coding;gene_synonym=SCM1.19c;locus_tag=SCO0886
NC_003888.3	RefSeq	CDS	931757	932791	.	-	0	ID=cds851;Parent=gene872;Dbxref=Genbank:NP_625185.1,GeneID:1096309;Name=NP_625185.1;Note=SCM1.19c%2C possible LacI-family transcriptional regulator%2C len: 344 aa. Similar to many including: Escherichia coli SW:RBSR_ECOLI (EMBL:M13169) ribose operon repressor (329 aa)%2C fasta scores opt: 353 z-score: 387.9 E(): 2.9e-14 30.7%25 identity in 313 aa overlap. Also similar to several Streptomyces coelicolor LacI-family transcriptional regulators e.g. TR:CAB59495 (EMBL:AL132648) (350 aa)%2C fasta scores opt: 377 z-score: 413.3 E(): 1.1e-15 33.9%25 identity in 345 aa overlap and TR:O87600 (EMBL:AF086832) (350 aa)%2C fasta scores opt: 377 z-score: 413.3 E(): 1.1e-15 33.9%25 identity in 345 aa overlap. Contains a Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family with a  helix-turn-helix motif situated between residues 19..40 (+5.76 SD).;gbkey=CDS;gene=SCM1.19c;product=LacI family transcriptional regulator;protein_id=NP_625185.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	932660	932725	.	-	.	ID=id988;Dbxref=GeneID:1096309;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 36.20%2C E-value 9.9e-09;gbkey=misc_feature;gene=SCM1.19c
NC_003888.3	RefSeq	gene	932864	933568	.	-	.	ID=gene873;Dbxref=GeneID:1096310;Name=SCM1.20c;gbkey=Gene;gene=SCM1.20c;gene_biotype=protein_coding;gene_synonym=SCM1.20c;locus_tag=SCO0887
NC_003888.3	RefSeq	CDS	932864	933568	.	-	0	ID=cds852;Parent=gene873;Dbxref=Genbank:NP_625186.1,GeneID:1096310;Name=NP_625186.1;Note=SCM1.20c%2C possible TetR-family transcriptional regulator%2C len: 234 aa. Similar to another Streptomyces coelicolor TetR-family transcriptional regulator TR:CAB58280 (EMBL:AL121849) (194 aa)%2C fasta scores opt: 196 z-score: 233.7 E(): 1.1e-05 30.8%25 identity in 208 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with a helix-turn-helix motif situated between residues 61..82 (+3.80 SD).;gbkey=CDS;gene=SCM1.20c;product=TetR family transcriptional regulator;protein_id=NP_625186.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	933296	933436	.	-	.	ID=id989;Dbxref=GeneID:1096310;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 26.10%2C E-value 1.6e-05;gbkey=misc_feature;gene=SCM1.20c
NC_003888.3	RefSeq	gene	933708	934271	.	+	.	ID=gene874;Dbxref=GeneID:1096311;Name=SCM1.21;gbkey=Gene;gene=SCM1.21;gene_biotype=protein_coding;gene_synonym=SCM1.21;locus_tag=SCO0888
NC_003888.3	RefSeq	CDS	933708	934271	.	+	0	ID=cds853;Parent=gene874;Dbxref=Genbank:NP_625187.1,GeneID:1096311;Name=NP_625187.1;Note=SCM1.21%2C possible hypothetical protein%2C len: 187 aa. Similar to several proteins of undefined function e.g. Mycobacterium tuberculosis TR:P95105 (EMBL:Z83866) hypothetical 19.1 KD protein (184 aa)%2C fasta scores opt: 651 z-score: 722.6 E(): 6.7e-33 56.6%25 identity in 175 aa overlap. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SCM1.21;product=hypothetical protein;protein_id=NP_625187.1;transl_table=11
NC_003888.3	RefSeq	gene	934332	935237	.	-	.	ID=gene875;Dbxref=GeneID:1096312;Name=SCM1.22c;gbkey=Gene;gene=SCM1.22c;gene_biotype=protein_coding;gene_synonym=SCM1.22c;locus_tag=SCO0889
NC_003888.3	RefSeq	CDS	934332	935237	.	-	0	ID=cds854;Parent=gene875;Dbxref=Genbank:NP_625188.1,GeneID:1096312;Name=NP_625188.1;Note=SCM1.22c%2C possible LysR-family transcriptional regulatory protein%2C len: 301 aa. Similar to many other regulatory proteins including: Escherichia coli SW:OXYR_ECOLI (EMBL:J04553) hydrogen peroxide-inducible genes activator (305 aa)%2C fasta scores opt: 348 z-score: 401.9 E(): 4.8e-15 28.4%25 identity in 299 aa overlap and Streptomyces coelicolor TR:O86805 (EMBL:AL031317) transcriptional regulator (306 aa)%2C fasta scores opt: 491 z-score: 563.9 E(): 4.6e-24 36.4%25 identity in 302 aa overlap. Contains a Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C with the helix-turn-helix motif situated between residues 17..38 (+3.88 SD).;gbkey=CDS;gene=SCM1.22c;product=LysR family transcriptional regulator;protein_id=NP_625188.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	934800	935228	.	-	.	ID=id990;Dbxref=GeneID:1096312;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 122.20%2C E-value 9.9e-33;gbkey=misc_feature;gene=SCM1.22c
NC_003888.3	RefSeq	gene	935622	936329	.	-	.	ID=gene876;Dbxref=GeneID:1096313;Name=SCM1.23c;gbkey=Gene;gene=SCM1.23c;gene_biotype=protein_coding;gene_synonym=SCM1.23c;locus_tag=SCO0890
NC_003888.3	RefSeq	CDS	935622	936329	.	-	0	ID=cds855;Parent=gene876;Dbxref=Genbank:NP_625189.1,GeneID:1096313;Name=NP_625189.1;Note=SCM1.23c%2C possible short chain oxidoreductase%2C len: 235 aa. Similar to several including: Bradyrhizobium japonicum SW:FIXR_BRAJA(EMBL:X06167) FixR protein involved in symbiotic nitrogen fixation (278 aa)%2C fasta scores opt: 262 z-score: 283.4 E(): 1.9e-08 30.8%25 identity in 224 aa overlap and Streptomyces coelicolor TR:CAB56136(EMBL:AL117669) short chain oxidoreductase (299 aa)%2C fasta scores opt: 290 z-score: 311.9 E(): 5e-10 38.6%25 identity in 233 aa overlap. Contains a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SCM1.23c;product=short chain oxidoreductase;protein_id=NP_625189.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	935748	936326	.	-	.	ID=id991;Dbxref=GeneID:1096313;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 129.70%2C E-value 5.5e-35;gbkey=misc_feature;gene=SCM1.23c
NC_003888.3	RefSeq	stem_loop	936367	936409	.	+	.	ID=id992;Note=possible stem loop of 20 bps (95%25 matches) and a loop of 2 bps.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	936431	937270	.	+	.	ID=gene877;Dbxref=GeneID:1096314;Name=SCM1.24;gbkey=Gene;gene=SCM1.24;gene_biotype=protein_coding;gene_synonym=SCM1.24;locus_tag=SCO0891
NC_003888.3	RefSeq	CDS	936431	937270	.	+	0	ID=cds856;Parent=gene877;Dbxref=Genbank:NP_625190.1,GeneID:1096314;Name=NP_625190.1;Note=SCM1.24%2C possible DNA-binding protein%2C len: 279 aa. Highly similar to many Streptomyces coelicolor DNA-binding proteins e.g. TR:CAB53273 (EMBL:AL109972) SCJ9A.12C (279 aa)%2C fasta scores opt: 564 z-score: 639.5 E(): 2.8e-28 37.2%25 identity in 269 aa overlap. Contains a Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and a Prosite hit to PS00092 N-6 Adenine-specific DNA methylases signature. The helix-turn-helix motif is situated between residues 35..56 (+4.25 SD);gbkey=CDS;gene=SCM1.24;product=DNA-binding protein;protein_id=NP_625190.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	936518	936673	.	+	.	ID=id993;Dbxref=GeneID:1096314;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 25.60%2C E-value 0.0011;gbkey=misc_feature;gene=SCM1.24
NC_003888.3	RefSeq	sequence_feature	936812	936832	.	+	.	ID=id994;Dbxref=GeneID:1096314;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;gene=SCM1.24
NC_003888.3	RefSeq	gene	937290	938240	.	-	.	ID=gene878;Dbxref=GeneID:1096315;Name=SCM1.25c;gbkey=Gene;gene=SCM1.25c;gene_biotype=protein_coding;gene_synonym=SCM1.25c;locus_tag=SCO0892
NC_003888.3	RefSeq	CDS	937290	938240	.	-	0	ID=cds857;Parent=gene878;Dbxref=Genbank:NP_625191.1,GeneID:1096315;Name=NP_625191.1;Note=SCM1.25c%2C possible integral membrane protein%2C len: 316 aa. Highly similar to several other membrane proteins including: Serratia marcescens SW:TERC_SERMA(EMBL:L38824) tellurium resistance protein TerC (346 aa)%2C fasta scores opt: 381 z-score: 448.5 E(): 1.2e-17 32.3%25 identity in 325 aa overlap and Streptomyces coelicolor TR:Q9Z503(EMBL:AL035591) integral membrane export protein SCC54.23c (333 aa)%2C fasta scores opt: 1690 z-score: 1964.9 E(): 0 79.1%25 identity in 316 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCM1.25c;product=hypothetical protein;protein_id=NP_625191.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	938246	938250	.	-	.	ID=id995;gbkey=RBS
NC_003888.3	RefSeq	gene	938389	939612	.	+	.	ID=gene879;Dbxref=GeneID:1096316;Name=SCM1.26;gbkey=Gene;gene=SCM1.26;gene_biotype=protein_coding;gene_synonym=SCM1.26;locus_tag=SCO0893
NC_003888.3	RefSeq	CDS	938389	939612	.	+	0	ID=cds858;Parent=gene879;Dbxref=Genbank:NP_625192.1,GeneID:1096316;Name=NP_625192.1;Note=SCM1.26%2C possible membrane protein%2C len: 407 aa. Weakly similar to a hypothetical protein from Synechocystis sp. (strain PCC 6803) TR:P72959(EMBL:D90902) (343 aa)%2C fasta scores opt: 215 z-score: 248.3 E(): 1.8e-06 28.7%25 identity in 352 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCM1.26;product=hypothetical protein;protein_id=NP_625192.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	939615	939619	.	+	.	ID=id996;gbkey=RBS
NC_003888.3	RefSeq	gene	939627	941063	.	+	.	ID=gene880;Dbxref=GeneID:1096317;Name=SCM1.27;gbkey=Gene;gene=SCM1.27;gene_biotype=protein_coding;gene_synonym=SCM1.27;locus_tag=SCO0894
NC_003888.3	RefSeq	CDS	939627	941063	.	+	0	ID=cds859;Parent=gene880;Dbxref=Genbank:NP_625193.1,GeneID:1096317;Name=NP_625193.1;Note=SCM1.27%2C possible membrane protein%2C len: 478 aa. Contains possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCM1.27;product=hypothetical protein;protein_id=NP_625193.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	940746	942228	.	-	.	ID=id997;Note=Previously sequenced and characterised region: Streptomyces coelicolor SW:HRDC_STRCO(EMBL:X52981) hrdC gene for principal sigma subunit;gbkey=misc_feature
NC_003888.3	RefSeq	gene	941071	942090	.	-	.	ID=gene881;Dbxref=GeneID:1096318;Name=hrdC;gbkey=Gene;gene=hrdC;gene_biotype=protein_coding;gene_synonym=hrdC,SCM1.28c;locus_tag=SCO0895
NC_003888.3	RefSeq	CDS	941071	942090	.	-	0	ID=cds860;Parent=gene881;Dbxref=Genbank:NP_625194.1,GeneID:1096318;Name=NP_625194.1;Note=SCM1.28c%2C hrdC%2C RNA polymerase principal sigma factor HrdC%2C len: 339 aa. Previously sequenced and characterised Streptomyces coelicolor strain A3(2) SW:HRDC_STRCO(EMBL:X52981). Contains a Pfam match to entry PF00140 sigma70%2C Sigma-70 factor. The helix-turn-helix motif is situated between residues 298..319 (+6.49 SD).;gbkey=CDS;gene=hrdC;product=RNA polymerase principal sigma factor HrdC;protein_id=NP_625194.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	941110	941793	.	-	.	ID=id998;Dbxref=GeneID:1096318;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 415.70%2C E-value 4.2e-121;gbkey=misc_feature;gene=hrdC
NC_003888.3	RefSeq	ribosome_entry_site	942098	942102	.	-	.	ID=id999;gbkey=RBS
NC_003888.3	RefSeq	gene	942453	942878	.	-	.	ID=gene882;Dbxref=GeneID:1096319;Name=SCM1.29c;gbkey=Gene;gene=SCM1.29c;gene_biotype=protein_coding;gene_synonym=SCM1.29c;locus_tag=SCO0896
NC_003888.3	RefSeq	CDS	942453	942878	.	-	0	ID=cds861;Parent=gene882;Dbxref=Genbank:NP_625195.1,GeneID:1096319;Name=NP_625195.1;Note=SCM1.29c%2C possible oxidoreductase%2C len: 141 aa. Similar to many including Methanopyrus kandleri SW:IMDH_METKA (EMBL:U31567)  inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (172 aa)%2C fasta scores opt: 227 z-score: 288.9 E(): 9.5e-09 31.6%25 identity in 117 aa overlap and Bacillus subtilis SW:YHCV_BACSU (EMBL:X96983) hypothetical 14.9 KD protein (140 aa)%2C fasta scores opt: 295 z-score: 372.8 E(): 2e-13 40.0%25 identity in 135 aa overlap. Contains 2x Pfam match to entry PF00571 CBS%2C CBS domains.;gbkey=CDS;gene=SCM1.29c;product=oxidoreductase;protein_id=NP_625195.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	942501	942662	.	-	.	ID=id1000;Dbxref=GeneID:1096319;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 34.50%2C E-value 2.5e-06;gbkey=misc_feature;gene=SCM1.29c
NC_003888.3	RefSeq	sequence_feature	942702	942860	.	-	.	ID=id1001;Dbxref=GeneID:1096319;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 15.20%2C E-value 0.45;gbkey=misc_feature;gene=SCM1.29c
NC_003888.3	RefSeq	gene	942974	943567	.	-	.	ID=gene883;Dbxref=GeneID:1096320;Name=SCM1.30c;gbkey=Gene;gene=SCM1.30c;gene_biotype=protein_coding;gene_synonym=SCM1.30c;locus_tag=SCO0897
NC_003888.3	RefSeq	CDS	942974	943567	.	-	0	ID=cds862;Parent=gene883;Dbxref=Genbank:NP_625196.1,GeneID:1096320;Name=NP_625196.1;Note=SCM1.30c%2C unknown%2C len: 197 aa%3B similar to the plasmid borne TR:CAC48467 (EMBL:AL603642) Rhizobium meliloti (Sinorhizobium meliloti) hypothetical protein SMB20067%2C 173 aa%3B fasta scores: opt: 483 Z-score: 502.3 E(): 2.4e-20%3B 51.370%25 identity) in 146 aa overlap;gbkey=CDS;gene=SCM1.30c;product=hypothetical protein;protein_id=NP_625196.1;transl_table=11
NC_003888.3	RefSeq	gene	943851	945833	.	-	.	ID=gene884;Dbxref=GeneID:1096321;Name=SCM1.31c;gbkey=Gene;gene=SCM1.31c;gene_biotype=protein_coding;gene_synonym=SCM1.31c;locus_tag=SCO0898
NC_003888.3	RefSeq	CDS	943851	945833	.	-	0	ID=cds863;Parent=gene884;Dbxref=Genbank:NP_625197.1,GeneID:1096321;Name=NP_625197.1;Note=SCM1.31c%2C possible regulator%2C len: 660 aa. Similar to many other regulators including several from Streptomyces coelicolor e.g. SW:AFSR_STRCO (EMBL:D90155) regulatory protein AfsR (993 aa)%2C fasta scores opt: 531 z-score: 560.0 E(): 7.5e-24 31.9%25 identity in 568 aa overlap and TR:Q9Z389(EMBL:AL035654) transcriptional regulator SCE8.10 (638 aa)%2C fasta scores opt: 430 z-score: 456.1 E(): 4.6e-18 31.2%25 identity in 385 aa overlap.;gbkey=CDS;gene=SCM1.31c;product=regulator;protein_id=NP_625197.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	946030	946033	.	+	.	ID=id1002;gbkey=RBS
NC_003888.3	RefSeq	gene	946045	946941	.	+	.	ID=gene885;Dbxref=GeneID:1096322;Name=SCM1.32;gbkey=Gene;gene=SCM1.32;gene_biotype=protein_coding;gene_synonym=SCM1.32;locus_tag=SCO0899
NC_003888.3	RefSeq	CDS	946045	946941	.	+	0	ID=cds864;Parent=gene885;Dbxref=Genbank:NP_625198.1,GeneID:1096322;Name=NP_625198.1;Note=SCM1.32%2C possible hydrolase%2C len: 298 aa. Similar to many including: Moraxella sp. SW:DEH1_MORSP (EMBL:D90422:) haloacetate dehalogenase H-1 (EC 3.8.1.3) (294 aa)%2C fasta scores opt: 669 z-score: 782.5 E():0 39.2%25 identity in 296 aa overlap and Streptomyces coelicolor TR:O86546 (EMBL:AL031350) hydrolase SC1F2.09C (309 aa)%2C fasta scores opt: 336 z-score: 396.1 E(): 1e-14 31.1%25 identity in 305 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SCM1.32;product=hydrolase;protein_id=NP_625198.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	946228	946932	.	+	.	ID=id1003;Dbxref=GeneID:1096322;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 62.30%2C E-value 1.1e-14;gbkey=misc_feature;gene=SCM1.32
NC_003888.3	RefSeq	gene	947027	948310	.	+	.	ID=gene886;Dbxref=GeneID:1096323;Name=SCM1.33;gbkey=Gene;gene=SCM1.33;gene_biotype=protein_coding;gene_synonym=SCM1.33;locus_tag=SCO0900
NC_003888.3	RefSeq	CDS	947027	948310	.	+	0	ID=cds865;Parent=gene886;Dbxref=Genbank:NP_625199.1,GeneID:1096323;Name=NP_625199.1;Note=SCM1.33%2C possible transmembrane efflux protein%2C len: 427 aa. Similar to several other membrane transport proteins including: Francisella tularensis TR:AAC12938(EMBL:AF055345) tetracycline-resistance protein (396 aa)%2C fasta scores opt: 230 z-score: 259.1 E(): 4.4e-07 25.4%25 identity in 397 aa overlap and Streptomyces flavopersicus TR:AAD45543(EMBL:U70376) spectinomycin export protein%2C SpcT (433 aa)%2C fasta scores opt: 467 z-score: 520.7 E(): 1.2e-21 30.7%25 identity in 394 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCM1.33;product=transmembrane efflux protein;protein_id=NP_625199.1;transl_table=11
NC_003888.3	RefSeq	gene	948674	949762	.	-	.	ID=gene887;Dbxref=GeneID:1096324;Name=SCM1.34c;gbkey=Gene;gene=SCM1.34c;gene_biotype=protein_coding;gene_synonym=SCM1.34c;locus_tag=SCO0901
NC_003888.3	RefSeq	CDS	948674	949762	.	-	0	ID=cds866;Parent=gene887;Dbxref=Genbank:NP_625200.1,GeneID:1096324;Name=NP_625200.1;Note=SCM1.34c%2C unknown%2C len: 362 aa. Contains an inverted repeat.;gbkey=CDS;gene=SCM1.34c;product=hypothetical protein;protein_id=NP_625200.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	948820	948886	.	+	.	ID=id1004;Note=inverted repeat unit of 67 bps and aligning with complement 34185..34119 (67%25 matches).;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	948926	948992	.	-	.	ID=id1005;Dbxref=GeneID:1096324;Note=inverted repeat unit of 67 bps and aligning with 34013..34079 (67%25 matches).;gbkey=repeat_region;gene=SCM1.34c
NC_003888.3	RefSeq	gene	949864	950292	.	-	.	ID=gene888;Dbxref=GeneID:1096325;Name=SCM1.35c;gbkey=Gene;gene=SCM1.35c;gene_biotype=protein_coding;gene_synonym=SCM1.35c;locus_tag=SCO0902
NC_003888.3	RefSeq	CDS	949864	950292	.	-	0	ID=cds867;Parent=gene888;Dbxref=Genbank:NP_625201.1,GeneID:1096325;Name=NP_625201.1;Note=SCM1.35c%2C unknown%2C len: 142 aa. Similar to the C-terminus of several catechol 2%2C3-dioxygenases e.g. Sphingomonas sp. A8AN3 TR:Q9ZAY3(EMBL:U73127) catechol 2%2C3-dioxygenase (307 aa)%2C fasta scores opt:128 z-score: 160.4 E():0.14 31.2%25 identity in 141 aa overlap.;gbkey=CDS;gene=SCM1.35c;product=hypothetical protein;protein_id=NP_625201.1;transl_table=11
NC_003888.3	RefSeq	gene	950551	950811	.	+	.	ID=gene889;Dbxref=GeneID:1096326;Name=SCM1.36;gbkey=Gene;gene=SCM1.36;gene_biotype=protein_coding;gene_synonym=SCM1.36;locus_tag=SCO0903
NC_003888.3	RefSeq	CDS	950551	950811	.	+	0	ID=cds868;Parent=gene889;Dbxref=Genbank:NP_625202.1,GeneID:1096326;Name=NP_625202.1;Note=SCM1.36%2C unknown%2C len: 86 aa.;gbkey=CDS;gene=SCM1.36;product=hypothetical protein;protein_id=NP_625202.1;transl_table=11
NC_003888.3	RefSeq	gene	950823	951122	.	+	.	ID=gene890;Dbxref=GeneID:1096327;Name=SCM1.37;gbkey=Gene;gene=SCM1.37;gene_biotype=protein_coding;gene_synonym=SCM1.37;locus_tag=SCO0904
NC_003888.3	RefSeq	CDS	950823	951122	.	+	0	ID=cds869;Parent=gene890;Dbxref=Genbank:NP_625203.1,GeneID:1096327;Name=NP_625203.1;Note=SCM1.37%2C possible hypothetical protein%2C len: 99 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCM1.37;product=hypothetical protein;protein_id=NP_625203.1;transl_table=11
NC_003888.3	RefSeq	gene	951217	951522	.	+	.	ID=gene891;Dbxref=GeneID:1096328;Name=SCM1.38;gbkey=Gene;gene=SCM1.38;gene_biotype=protein_coding;gene_synonym=SCM1.38;locus_tag=SCO0905
NC_003888.3	RefSeq	CDS	951217	951522	.	+	0	ID=cds870;Parent=gene891;Dbxref=Genbank:NP_625204.1,GeneID:1096328;Name=NP_625204.1;Note=SCM1.38%2C possible membrane protein%2C len: 101 aa. Highly similar to the very C-terminus of Streptomyces coelicolor SW:MMLA_STRCO(EMBL:M64683) membrane protein ACTII-3 (711 aa)%2C fasta scores opt: 232 z-score: 254.6 E(): 7.8e-07 48.3%25 identity in 87 aa overlap. Contains a possible N-terminal signal sequence and a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCM1.38;product=hypothetical protein;protein_id=NP_625204.1;transl_table=11
NC_003888.3	RefSeq	gene	951452	951949	.	-	.	ID=gene892;Dbxref=GeneID:1096329;Name=SCM1.39c;gbkey=Gene;gene=SCM1.39c;gene_biotype=protein_coding;gene_synonym=SCM1.39c;locus_tag=SCO0906
NC_003888.3	RefSeq	CDS	951452	951949	.	-	0	ID=cds871;Parent=gene892;Dbxref=Genbank:NP_625205.1,GeneID:1096329;Name=NP_625205.1;Note=SCM1.39c%2C unknown%2C len: 165 aa. Weakly similar to several proteins of undefined function e.g. Mycobacterium tuberculosis TR:O53240(EMBL:AL021287) hypothetical 18.2 KD protein (163 aa)%2C fasta scores opt: 148 z-score: 178.3 E(): 0.014 30.9%25 identity in 139 aa overlap.;gbkey=CDS;gene=SCM1.39c;product=hypothetical protein;protein_id=NP_625205.1;transl_table=11
NC_003888.3	RefSeq	gene	951968	952858	.	-	.	ID=gene893;Dbxref=GeneID:1096330;Name=SCM1.40c;gbkey=Gene;gene=SCM1.40c;gene_biotype=protein_coding;gene_synonym=SCM1.40c;locus_tag=SCO0907
NC_003888.3	RefSeq	CDS	951968	952858	.	-	0	ID=cds872;Parent=gene893;Dbxref=Genbank:NP_625206.1,GeneID:1096330;Name=NP_625206.1;Note=SCM1.40c%2C possible dehydrogenase%2C len: 296 aa. Similar to many including: Pseudomonas cruciviae TR:Q9ZNH7 (EMBL:AB015439) D-threonine dehydrogenase (fragment) (292 aa)%2C fasta scores opt: 458 z-score: 510.7 E(): 4.5e-21 33.0%25 identity in 297 aa overlap.;gbkey=CDS;gene=SCM1.40c;product=dehydrogenase;protein_id=NP_625206.1;transl_table=11
NC_003888.3	RefSeq	gene	952991	953455	.	+	.	ID=gene894;Dbxref=GeneID:1096331;Name=SCM1.41;gbkey=Gene;gene=SCM1.41;gene_biotype=protein_coding;gene_synonym=SCM1.41;locus_tag=SCO0908
NC_003888.3	RefSeq	CDS	952991	953455	.	+	0	ID=cds873;Parent=gene894;Dbxref=Genbank:NP_625207.1,GeneID:1096331;Name=NP_625207.1;Note=SCM1.41%2C unknown%2C len: 154 aa. Similar to the C-terminus of a protein of unknown function in Mycobacterium tuberculosis TR:P71738(EMBL:Z81368) (189 aa)%2C fasta scores opt: 451 z-score: 544.4 E(): 5.6e-23 48.7%25 identity in 154 aa overlap;gbkey=CDS;gene=SCM1.41;product=hypothetical protein;protein_id=NP_625207.1;transl_table=11
NC_003888.3	RefSeq	gene	953440	954429	.	-	.	ID=gene895;Dbxref=GeneID:1096332;Name=SCM1.42c;gbkey=Gene;gene=SCM1.42c;gene_biotype=protein_coding;gene_synonym=SCM1.42c;locus_tag=SCO0909
NC_003888.3	RefSeq	CDS	953440	954429	.	-	0	ID=cds874;Parent=gene895;Dbxref=Genbank:NP_625208.1,GeneID:1096332;Name=NP_625208.1;Note=SCM1.42c%2C hypothetical protein%2C len: 329 aa%3B similar to TR:Q9RZM4 (EMBL:AE001826) Deinococcus radiodurans hypothetical protein DRB0099%2C 285 aa%3B fasta scores: opt: 634 Z-score: 682.1 E(): 2.3e-30%3B 46.642%25 identity in 268 aa overlap;gbkey=CDS;gene=SCM1.42c;product=hypothetical protein;protein_id=NP_625208.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	954552	954557	.	+	.	ID=id1006;gbkey=RBS
NC_003888.3	RefSeq	gene	954566	955867	.	+	.	ID=gene896;Dbxref=GeneID:1096333;Name=SCM1.43;gbkey=Gene;gene=SCM1.43;gene_biotype=protein_coding;gene_synonym=SCM1.43;locus_tag=SCO0910
NC_003888.3	RefSeq	CDS	954566	955867	.	+	0	ID=cds875;Parent=gene896;Dbxref=Genbank:NP_625209.1,GeneID:1096333;Name=NP_625209.1;Note=SCM1.43%2C unknown%2C len: 433 aa. Similar to a hypothetical protein from Mycobacterium tuberculosis TR:O69672 (EMBL:AL022121) (432 aa)%2C fasta scores opt: 687 z-score: 787.6 E():0 37.5%25 identity in 421 aa overlap. Also similar to the C-terminus of several Eukaryotic gamma-glutamylcysteine synthetases involved in the de novo synthesis of glutathione in plant chloroplasts%2C e.g. Brassica juncea (Indian mustard) SW:GSH1_BRAJU(EMBL:Y10848) glutamate-cysteine ligase precursor (EC 6.3.2.2) (514 aa)%2C fasta scores opt: 428 z-score: 490.5 E(): 6.1e-20 30.4%25 identity in 362 aa overlap;gbkey=CDS;gene=SCM1.43;product=hypothetical protein;protein_id=NP_625209.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	955848	955852	.	+	.	ID=id1007;Dbxref=GeneID:1096333;gbkey=RBS;gene=SCM1.43
NC_003888.3	RefSeq	gene	955864	957204	.	+	.	ID=gene897;Dbxref=GeneID:1096334;Name=SCM1.44;gbkey=Gene;gene=SCM1.44;gene_biotype=protein_coding;gene_synonym=SCM1.44;locus_tag=SCO0911
NC_003888.3	RefSeq	CDS	955864	957204	.	+	0	ID=cds876;Parent=gene897;Dbxref=Genbank:NP_625210.1,GeneID:1096334;Name=NP_625210.1;Note=SCM1%2C44%2C unknown%2C len: 446 aa. Similar to several proteins of undefined function e.g. from Mycobacterium tuberculosis TR:O69671(EMBL:AL022121) hypothetical 47.1 KD protein (425 aa)%2C fasta scores opt: 1480 z-score: 1643.4 E():0 53.9%25 identity in 421 aa overlap.;gbkey=CDS;gene=SCM1.44;product=hypothetical protein;protein_id=NP_625210.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	957192	957197	.	+	.	ID=id1008;Dbxref=GeneID:1096334;gbkey=RBS;gene=SCM1.44
NC_003888.3	RefSeq	gene	957204	958019	.	+	.	ID=gene898;Dbxref=GeneID:1096335;Name=SCM1.45;gbkey=Gene;gene=SCM1.45;gene_biotype=protein_coding;gene_synonym=SCM1.45;locus_tag=SCO0912
NC_003888.3	RefSeq	CDS	957204	958019	.	+	0	ID=cds877;Parent=gene898;Dbxref=Genbank:NP_625211.1,GeneID:1096335;Name=NP_625211.1;Note=SCM1.45%2C unknown%2C len: 271 aa. Similar to several proteins of undefined function including: Mycobacterium tuberculosis TR:O69670(EMBL:AL022121) hypothetical 24.6 KD protein (233 aa)%2C fasta scores opt: 383 z-score: 443.9 E(): 2.2e-17 44.8%25 identity in 252 aa overlap. Also weakly similar to several Eukaryotic proteins e.g. Saccharomyces cerevisiae SW:YNT1_YEAST(EMBL:Z71467) hypothetical 40.2 KD protein (357 aa)%2C fasta scores opt: 221 z-score: 257.3 E(): 5.5e-07 26.1%25 identity in 306 aa overlap.;gbkey=CDS;gene=SCM1.45;product=hypothetical protein;protein_id=NP_625211.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	958002	958007	.	+	.	ID=id1009;Dbxref=GeneID:1096335;gbkey=RBS;gene=SCM1.45
NC_003888.3	RefSeq	gene	958016	958987	.	+	.	ID=gene899;Dbxref=GeneID:1096336;Name=SCM1.46;gbkey=Gene;gene=SCM1.46;gene_biotype=protein_coding;gene_synonym=SCM1.46,SCM10.01;locus_tag=SCO0913
NC_003888.3	RefSeq	CDS	958016	958987	.	+	0	ID=cds878;Parent=gene899;Dbxref=Genbank:NP_733517.1,GeneID:1096336;Name=NP_733517.1;Note=SCM10.01%2C hypothetical protein (partial CDS)%2C len: >115 aa%3B similar to various hypothetical proteins%2C e.g. TR:O69669 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical 35.4 kD protein MTV025.049c%2C 321 aa%3B fasta scores: opt: 413 z-score: 559.6 E(): 8.8e-24%3B 59.8%25 identity in 112 aa overlap~SCM1.46%2C hypothetical protein%2C partial CDS%2C len: > 251 aa. Similar to several proteins of undefined function including: Mycobacterium tuberculosis TR:O69669(EMBL:AL022121) hypothetical 35.4 KD protein (321 aa)%2C fasta scores opt: 897 z-score: 1053.0 E():0 59.9%25 identity in 242 aa overlap and Synechocystis sp. (strain PCC 6803) TR:P73759(EMBL:D90909) hypothetical 38.0 KD protein (337 aa)%2C fasta scores opt: 646 z-score:759.9 E():0 47.4%25 identity in 232 aa overlap.;gbkey=CDS;gene=SCM1.46;product=hypothetical protein;protein_id=NP_733517.1;transl_table=11
NC_003888.3	RefSeq	gene	959024	960292	.	-	.	ID=gene900;Dbxref=GeneID:1096337;Name=SCM10.02c;gbkey=Gene;gene=SCM10.02c;gene_biotype=protein_coding;gene_synonym=SCM10.02c;locus_tag=SCO0914
NC_003888.3	RefSeq	CDS	959024	960292	.	-	0	ID=cds879;Parent=gene900;Dbxref=Genbank:NP_625212.1,GeneID:1096337;Name=NP_625212.1;Note=SCM10.02c%2C possible lipoprotein%2C len: 422 aa%3B similar to TR:CAB59588 (EMBL:AL132662) Streptomyces coelicolor sugar transporter sugar binding protein SCF11.11%2C 422 aa%3B fasta scores: opt: 1543 z-score: 1682.7 E(): 0%3B 57.6%25 identity in 427 aa overlap and to SW: MALE_ENTAE Enterobacter aerogenes maltose-binding periplasmic protein precursor MalE%2C 396 aa%3B fasta scores: opt: 224 z-score: 248.5 E(): 1.9e-06%3B 23.9%25 identity in 427 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and match correctly situated to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCM10.02c;product=lipoprotein;protein_id=NP_625212.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	959057	959902	.	-	.	ID=id1010;Dbxref=GeneID:1096337;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 68.60%2C E-value 1.4e-16;gbkey=misc_feature;gene=SCM10.02c
NC_003888.3	RefSeq	sequence_feature	960236	960268	.	-	.	ID=id1011;Dbxref=GeneID:1096337;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCM10.02c
NC_003888.3	RefSeq	ribosome_entry_site	960300	960304	.	-	.	ID=id1012;gbkey=RBS
NC_003888.3	RefSeq	gene	960501	960758	.	+	.	ID=gene901;Dbxref=GeneID:1096338;Name=SCM10.03;gbkey=Gene;gene=SCM10.03;gene_biotype=protein_coding;gene_synonym=SCM10.03;locus_tag=SCO0915
NC_003888.3	RefSeq	CDS	960501	960758	.	+	0	ID=cds880;Parent=gene901;Dbxref=Genbank:NP_625213.1,GeneID:1096338;Name=NP_625213.1;Note=SCM10.03%2C unknown%2C len: 85 aa%3B similar to TR:O53714 (EMBL:AL021931) Mycobacterium tuberculosis MTV036.14 possible protein transport protein%2C 71 aa%3B fasta scores: opt: 96 z-score: 153.6 E(): 0.36%3B 24.2%25 identity in 62 aa overlap;gbkey=CDS;gene=SCM10.03;product=hypothetical protein;protein_id=NP_625213.1;transl_table=11
NC_003888.3	RefSeq	gene	960792	961283	.	-	.	ID=gene902;Dbxref=GeneID:1096339;Name=SCM10.04c;gbkey=Gene;gene=SCM10.04c;gene_biotype=protein_coding;gene_synonym=SCM10.04c;locus_tag=SCO0916
NC_003888.3	RefSeq	CDS	960792	961283	.	-	0	ID=cds881;Parent=gene902;Dbxref=Genbank:NP_625214.1,GeneID:1096339;Name=NP_625214.1;Note=SCM10.04c%2C unknown%2C len: 163 aa;gbkey=CDS;gene=SCM10.04c;product=hypothetical protein;protein_id=NP_625214.1;transl_table=11
NC_003888.3	RefSeq	gene	961534	962553	.	+	.	ID=gene903;Dbxref=GeneID:1096340;Name=SCM10.05;gbkey=Gene;gene=SCM10.05;gene_biotype=protein_coding;gene_synonym=SCM10.05;locus_tag=SCO0917
NC_003888.3	RefSeq	CDS	961534	962553	.	+	0	ID=cds882;Parent=gene903;Dbxref=Genbank:NP_625215.1,GeneID:1096340;Name=NP_625215.1;Note=SCM10.05%2C possible oxygenase%2C len: 339 aa%3B similar to TR:Q9X2P4 (EMBL:AF041061) Mycobacterium smegmatis alkanal monooxygenase-like hypothetical protein AmlP%2C 289 aa%3B fasta scores: opt: 269 z-score: 305.4 E(): 1.3e-09%3B 29.2%25 identity in 291 aa overlap and to SW:LUXA_VIBHA (EMBL:M10961) Vibrio harveyi alkanal monooxygenase alpha chain (EC 1.14.14.3) LuxA%2C 355 aa%3B fasta scores: opt: 208 z-score: 236.6 E(): 8.6e-06%3B 27.8%25 identity in 205 aa overlap. Contains Pfam match to entry PF00296 bac_luciferase%2C Bacterial luciferase;gbkey=CDS;gene=SCM10.05;product=oxygenase;protein_id=NP_625215.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	961594	961833	.	+	.	ID=id1013;Dbxref=GeneID:1096340;Note=Pfam match to entry PF00296 bac_luciferase%2C Bacterial luciferase%2C score 21.00%2C E-value 4e-06;gbkey=misc_feature;gene=SCM10.05
NC_003888.3	RefSeq	ribosome_entry_site	962583	962586	.	+	.	ID=id1014;gbkey=RBS
NC_003888.3	RefSeq	gene	962596	964941	.	+	.	ID=gene904;Dbxref=GeneID:1096341;Name=SCM10.06;gbkey=Gene;gene=SCM10.06;gene_biotype=protein_coding;gene_synonym=SCM10.06;locus_tag=SCO0918
NC_003888.3	RefSeq	CDS	962596	964941	.	+	0	ID=cds883;Parent=gene904;Dbxref=Genbank:NP_625216.1,GeneID:1096341;Name=NP_625216.1;Note=SCM10.06%2C probable excinuclease ABC subunit A%2C len: 781 aa%3B similar to SW:UVRA_PSELE (EMBL:Z22595) Pseudomonas lemoignei  excinuclease ABC subunit A (fragment) UvrA%2C 689 aa%3B fasta scores: opt: 1263 z-score: 1326.5 E(): 0%3B 57.5%25 identity in 670 aa overlap%2C to SW:UVRA_MICLU (EMBL:X15867) Micrococcus luteus excinuclease ABC subunit A UvrA%2C 992 aa%3B fasta scores: opt: 1096 z-score: 1149.1 E(): 0%3B 40.9%25 identity in 962 aa overlap and to S. coelicolor SC5F2A.02c%2C 752 aa%3B fasta scores: opt: 1207 z-score: 981.3 E(): 0%3B 44.8%25 identity in 772 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran%2C ABC transporter%2C two matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and another two to Prosite entry PS00211 ABC transporters family signature;gbkey=CDS;gene=SCM10.06;product=excinuclease ABC subunit A;protein_id=NP_625216.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	962680	963858	.	+	.	ID=id1015;Dbxref=GeneID:1096341;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 31.90%2C E-value 7.7e-08;gbkey=misc_feature;gene=SCM10.06
NC_003888.3	RefSeq	sequence_feature	962701	962724	.	+	.	ID=id1016;Dbxref=GeneID:1096341;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCM10.06
NC_003888.3	RefSeq	sequence_feature	963634	963678	.	+	.	ID=id1017;Dbxref=GeneID:1096341;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCM10.06
NC_003888.3	RefSeq	sequence_feature	964063	964821	.	+	.	ID=id1018;Dbxref=GeneID:1096341;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 102.70%2C E-value 7.2e-27;gbkey=misc_feature;gene=SCM10.06
NC_003888.3	RefSeq	sequence_feature	964084	964107	.	+	.	ID=id1019;Dbxref=GeneID:1096341;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCM10.06
NC_003888.3	RefSeq	sequence_feature	964588	964632	.	+	.	ID=id1020;Dbxref=GeneID:1096341;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCM10.06
NC_003888.3	RefSeq	gene	964984	965943	.	-	.	ID=gene905;Dbxref=GeneID:1096342;Name=SCM10.07c;gbkey=Gene;gene=SCM10.07c;gene_biotype=protein_coding;gene_synonym=SCM10.07c;locus_tag=SCO0919
NC_003888.3	RefSeq	CDS	964984	965943	.	-	0	ID=cds884;Parent=gene905;Dbxref=Genbank:NP_625217.1,GeneID:1096342;Name=NP_625217.1;Note=SCM10.07c%2C unknown%2C len: 319 aa. Contains glycine/alanine rich region;gbkey=CDS;gene=SCM10.07c;product=hypothetical protein;protein_id=NP_625217.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	965461	965580	.	-	.	ID=id1021;Dbxref=GeneID:1096342;Note=glycine/alanine rich region;gbkey=misc_feature;gene=SCM10.07c
NC_003888.3	RefSeq	ribosome_entry_site	965954	965959	.	-	.	ID=id1022;gbkey=RBS
NC_003888.3	RefSeq	gene	966016	966843	.	-	.	ID=gene906;Dbxref=GeneID:1096343;Name=SCM10.08c;gbkey=Gene;gene=SCM10.08c;gene_biotype=protein_coding;gene_synonym=SCM10.08c;locus_tag=SCO0920
NC_003888.3	RefSeq	CDS	966016	966843	.	-	0	ID=cds885;Parent=gene906;Dbxref=Genbank:NP_625218.1,GeneID:1096343;Name=NP_625218.1;Note=SCM10.08c%2C probable acyltransferase%2C len: 260 aa%3B similar to SW:PLSC_NEIGO (EMBL:U21806) Neisseria gonorrhoeae 1-acyl-SN-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)PlsC%2C 255aa%3B fasta scores: opt: 384 z-score: 454.1 E(): 6.7e-18%3B 38.9%25 identity in 185 aa overlap. Contains Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCM10.08c;product=acyltransferase;protein_id=NP_625218.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	966079	966606	.	-	.	ID=id1023;Dbxref=GeneID:1096343;Note=Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase%2C score 90.60%2C E-value 3.2e-23;gbkey=misc_feature;gene=SCM10.08c
NC_003888.3	RefSeq	gene	966843	967613	.	-	.	ID=gene907;Dbxref=GeneID:1096344;Name=SCM10.09c;gbkey=Gene;gene=SCM10.09c;gene_biotype=protein_coding;gene_synonym=SCM10.09c;locus_tag=SCO0921
NC_003888.3	RefSeq	CDS	966843	967613	.	-	0	ID=cds886;Parent=gene907;Dbxref=Genbank:NP_625219.1,GeneID:1096344;Name=NP_625219.1;Note=SCM10.09c%2C hypothetical protein%2C len: 256 aa%3B similar to TR:O53274 (EMBL:AL021287) Mycobacterium tuberculosis hypothetical 27.0 kD protein%2C 246 aa%3B fasta scores: opt: 498 z-score: 593.9 E(): 1.1e-25%3B 47.7%25 identity in 237 aa overlap;gbkey=CDS;gene=SCM10.09c;product=hypothetical protein;protein_id=NP_625219.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	967621	967625	.	-	.	ID=id1024;gbkey=RBS
NC_003888.3	RefSeq	gene	967895	968641	.	-	.	ID=gene908;Dbxref=GeneID:1096345;Name=SCM10.10c;gbkey=Gene;gene=SCM10.10c;gene_biotype=protein_coding;gene_synonym=SCM10.10c;locus_tag=SCO0922
NC_003888.3	RefSeq	CDS	967895	968641	.	-	0	ID=cds887;Parent=gene908;Dbxref=Genbank:NP_625220.1,GeneID:1096345;Name=NP_625220.1;Note=catalyzes the reversible formation of fumarate and ubiquinol from succinate and ubiquinone;gbkey=CDS;gene=SCM10.10c;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=NP_625220.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	967949	968191	.	-	.	ID=id1025;Dbxref=GeneID:1096345;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 46.30%2C E-value 2.9e-12;gbkey=misc_feature;gene=SCM10.10c
NC_003888.3	RefSeq	sequence_feature	968135	968170	.	-	.	ID=id1026;Dbxref=GeneID:1096345;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SCM10.10c
NC_003888.3	RefSeq	sequence_feature	968375	968572	.	-	.	ID=id1027;Dbxref=GeneID:1096345;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 16.60%2C E-value 0.032;gbkey=misc_feature;gene=SCM10.10c
NC_003888.3	RefSeq	sequence_feature	968444	968470	.	-	.	ID=id1028;Dbxref=GeneID:1096345;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SCM10.10c
NC_003888.3	RefSeq	gene	968638	970587	.	-	.	ID=gene909;Dbxref=GeneID:1096346;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;gene_synonym=SCM10.11c;locus_tag=SCO0923
NC_003888.3	RefSeq	CDS	968638	970587	.	-	0	ID=cds888;Parent=gene909;Dbxref=Genbank:NP_625221.1,GeneID:1096346;Name=NP_625221.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=NP_625221.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	968648	968651	.	-	.	ID=id1029;Dbxref=GeneID:1096346;gbkey=RBS;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	969109	969174	.	-	.	ID=id1030;Dbxref=GeneID:1096346;Note=PS00605 ATP synthase c subunit signature;gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	969232	969393	.	-	.	ID=id1031;Dbxref=GeneID:1096346;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 72.10%2C E-value 8e-20;gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	969481	969612	.	-	.	ID=id1032;Dbxref=GeneID:1096346;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 19.30%2C E-value 9.7e-05;gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	969682	970149	.	-	.	ID=id1033;Dbxref=GeneID:1096346;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 96.50%2C E-value 8.7e-27;gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	gene	970589	971320	.	-	.	ID=gene910;Dbxref=GeneID:1096347;Name=SCM10.12c;gbkey=Gene;gene=SCM10.12c;gene_biotype=protein_coding;gene_synonym=SCM10.12c;locus_tag=SCO0924
NC_003888.3	RefSeq	CDS	970589	971320	.	-	0	ID=cds889;Parent=gene910;Dbxref=Genbank:NP_625222.1,GeneID:1096347;Name=NP_625222.1;Note=SCM10.12c%2C possible cytochrome B subunit subunit%2C len: 243 aa%3B similar to SW:FRDC_HELPY (EMBL:U78101) Helicobacter pylori fumarate reductase cytochrome B subunit FrdC%2C 255aa%3B fasta scores: opt: 106 z-score: 139.5 E(): 2.2%3B 22.1%25 identity in 181 aa overlap;gbkey=CDS;gene=SCM10.12c;product=cytochrome B subunit;protein_id=NP_625222.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	971322	971325	.	-	.	ID=id1034;gbkey=RBS
NC_003888.3	RefSeq	gene	971392	972276	.	+	.	ID=gene911;Dbxref=GeneID:1096348;Name=SCM10.13;gbkey=Gene;gene=SCM10.13;gene_biotype=protein_coding;gene_synonym=SCM10.13;locus_tag=SCO0925
NC_003888.3	RefSeq	CDS	971392	972276	.	+	0	ID=cds890;Parent=gene911;Dbxref=Genbank:NP_625223.1,GeneID:1096348;Name=NP_625223.1;Note=SCM10.13%2C probable lysR-family transcriptional regulator%2C len: 294 aa%3B similar to SW:GLTC_BACSU (EMBL:M28509) Bacillus subtilis transcriptional regulator protein GltC%2C 300 aa%3B fasta scores: opt: 539 z-score: 638.5 E(): 3.6e-28%3B 33.6%25 identity in 283 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Contains a possible helix-turn-helix motif at residues 16..37 (+4.14 SD);gbkey=CDS;gene=SCM10.13;product=LysR family transcriptional regulator;protein_id=NP_625223.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	971398	971826	.	+	.	ID=id1035;Dbxref=GeneID:1096348;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 195.70%2C E-value 7.4e-55;gbkey=misc_feature;gene=SCM10.13
NC_003888.3	RefSeq	sequence_feature	971440	971532	.	+	.	ID=id1036;Dbxref=GeneID:1096348;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCM10.13
NC_003888.3	RefSeq	gene	972311	973210	.	-	.	ID=gene912;Dbxref=GeneID:1096349;Name=SCM10.14c;gbkey=Gene;gene=SCM10.14c;gene_biotype=protein_coding;gene_synonym=SCM10.14c;locus_tag=SCO0926
NC_003888.3	RefSeq	CDS	972311	973210	.	-	0	ID=cds891;Parent=gene912;Dbxref=Genbank:NP_625224.1,GeneID:1096349;Name=NP_625224.1;Note=SCM10.14c%2C hypothetical protein%2C len: 299 aa%3B similar to TR:CAB58282 (EMBL:AL121850) Streptomyces coelicolor conserved hypothetical protein SCC78.01c (fragment)%2C 234 aa%3B fasta scores: opt: 221 z-score: 264.8 E(): 2.3e-07%3B 30.0%25 identity in 250 aa overlap;gbkey=CDS;gene=SCM10.14c;product=hypothetical protein;protein_id=NP_625224.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	973219	973222	.	-	.	ID=id1037;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	973377	973381	.	+	.	ID=id1038;gbkey=RBS
NC_003888.3	RefSeq	gene	973388	974224	.	+	.	ID=gene913;Dbxref=GeneID:1096350;Name=SCM10.15;gbkey=Gene;gene=SCM10.15;gene_biotype=protein_coding;gene_synonym=SCM10.15;locus_tag=SCO0927
NC_003888.3	RefSeq	CDS	973388	974224	.	+	0	ID=cds892;Parent=gene913;Dbxref=Genbank:NP_625225.1,GeneID:1096350;Name=NP_625225.1;Note=SCM10.15%2C probable lysR-family transcriptional regulator%2C len: 278 aa%3B similar to TR:CAB55655 (EMBL:AL117385) Streptomyces coelicolor lysR-family transcriptional regulator SC5G9.07c%2C 287 aa%3B fasta scores: opt: 598 z-score: 666.9 E(): 9.3e-30%3B 47.9%25 identity in 286 aa overlap and to SW:ALSR_BACSU (EMBL:L04470) Bacillus subtilis ALS operon regulatory protein AlsR%2C 302 aa%3B fasta scores: opt: 398 z-score: 446.6 E(): 1.7e-17%3B 37.6%25 identity in 186 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and two mathces to Prosite entries PS00044 Bacterial regulatory proteins%2C lysR family signature and PS00216 Sugar transport proteins signature 1. Contains also a helix-turn-helix motif at residues 16..37 (+5.84 SD);gbkey=CDS;gene=SCM10.15;product=LysR family transcriptional regulator;protein_id=NP_625225.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	973394	973816	.	+	.	ID=id1039;Dbxref=GeneID:1096350;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 144.70%2C E-value 1.6e-39;gbkey=misc_feature;gene=SCM10.15
NC_003888.3	RefSeq	sequence_feature	973436	973528	.	+	.	ID=id1040;Dbxref=GeneID:1096350;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCM10.15
NC_003888.3	RefSeq	gene	974312	976456	.	-	.	ID=gene914;Dbxref=GeneID:1096351;Name=SCM10.16c;gbkey=Gene;gene=SCM10.16c;gene_biotype=protein_coding;gene_synonym=SCM10.16c;locus_tag=SCO0928
NC_003888.3	RefSeq	CDS	974312	976456	.	-	0	ID=cds893;Parent=gene914;Dbxref=Genbank:NP_625226.1,GeneID:1096351;Name=NP_625226.1;Note=SCM10.16c%2C hypothetical protein%2C len: 714 aa%3B similar to C-terminal region of TR:Q55576 (EMBL:D63999) Synechocystis sp. hypothetical 141.7 kD protein%2C 1244 aa%3B fasta scores: opt: 1179 z-score: 1354.7 E(): 0%3B 37.6%25 identity in 574 aa overlap and to S. coelicolor SC8D9.07  phosphodiesterase%2C 746 aa%3B fasta scores: opt: 817 z-score: 782.4 E(): 0%3B 41.8%25 identity in 452 aa overlap. Contains Pfam matches to entries PF00989 PAS%2C PAS domain%2C PF00785 PAC%2C PAC motif%2C PF00990 DUF9%2C Domain of unknown function and PF00563 DUF2%2C Domain of unknown function 2;gbkey=CDS;gene=SCM10.16c;product=hypothetical protein;protein_id=NP_625226.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	974348	975112	.	-	.	ID=id1041;Dbxref=GeneID:1096351;Note=Pfam match to entry PF00563 DUF2%2C Domain of unknown function 2%2C score 294.60%2C E-value 1.2e-84;gbkey=misc_feature;gene=SCM10.16c
NC_003888.3	RefSeq	sequence_feature	975152	975643	.	-	.	ID=id1042;Dbxref=GeneID:1096351;Note=Pfam match to entry PF00990 DUF9%2C Domain of unknown function%2C score 226.00%2C E-value 5.3e-64;gbkey=misc_feature;gene=SCM10.16c
NC_003888.3	RefSeq	sequence_feature	975653	975781	.	-	.	ID=id1043;Dbxref=GeneID:1096351;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 41.00%2C E-value 2.6e-08;gbkey=misc_feature;gene=SCM10.16c
NC_003888.3	RefSeq	sequence_feature	975803	976000	.	-	.	ID=id1044;Dbxref=GeneID:1096351;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 23.30%2C E-value 6.5e-05;gbkey=misc_feature;gene=SCM10.16c
NC_003888.3	RefSeq	gene	976453	977265	.	-	.	ID=gene915;Dbxref=GeneID:1096352;Name=SCM10.17c;gbkey=Gene;gene=SCM10.17c;gene_biotype=protein_coding;gene_synonym=SCM10.17c;locus_tag=SCO0929
NC_003888.3	RefSeq	CDS	976453	977265	.	-	0	ID=cds894;Parent=gene915;Dbxref=Genbank:NP_625227.1,GeneID:1096352;Name=NP_625227.1;Note=SCM10.17c%2C hypothetical protein%2C len: 270 aa%3B similar to various S. coelicolor hypothetical proteins%2C e.g. TR:O86540 (EMBL:AL031350) Streptomyces coelicolor hypothetical 32.8 kD protein SC1F2.03c%2C 300 aa%3B fasta scores: opt: 713 z-score: 830.1 E(): 0%3B 45.0%25 identity in 262 aa overlap;gbkey=CDS;gene=SCM10.17c;product=hypothetical protein;protein_id=NP_625227.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	977272	977275	.	-	.	ID=id1045;gbkey=RBS
NC_003888.3	RefSeq	gene	977491	978444	.	-	.	ID=gene916;Dbxref=GeneID:1096353;Name=SCM10.18c;gbkey=Gene;gene=SCM10.18c;gene_biotype=protein_coding;gene_synonym=SCM10.18c;locus_tag=SCO0930
NC_003888.3	RefSeq	CDS	977491	978444	.	-	0	ID=cds895;Parent=gene916;Dbxref=Genbank:NP_625228.1,GeneID:1096353;Name=NP_625228.1;Note=SCM10.18c%2C possible lipoprotein%2C len: 317 aa. Contains possible N-terminal region signal peptide sequence and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SCM10.18c;product=lipoprotein;protein_id=NP_625228.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	978373	978405	.	-	.	ID=id1046;Dbxref=GeneID:1096353;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCM10.18c
NC_003888.3	RefSeq	gene	978713	979324	.	+	.	ID=gene917;Dbxref=GeneID:1096354;Name=SCM10.19;gbkey=Gene;gene=SCM10.19;gene_biotype=protein_coding;gene_synonym=SCM10.19;locus_tag=SCO0931
NC_003888.3	RefSeq	CDS	978713	979324	.	+	0	ID=cds896;Parent=gene917;Dbxref=Genbank:NP_625229.1,GeneID:1096354;Name=NP_625229.1;Note=SCM10.19%2C possible  proline-rich protein%2C len: 203 aa. Contains possible N-terminal signal peptide sequence and proline-rich region (giving similarities to proline-rich regions in many other proteins) and transmembrane domain at C-terminal region;gbkey=CDS;gene=SCM10.19;product=proline-rich protein;protein_id=NP_625229.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	978890	979228	.	+	.	ID=id1047;Dbxref=GeneID:1096354;Note=threonine/proline rich region;gbkey=misc_feature;gene=SCM10.19
NC_003888.3	RefSeq	ribosome_entry_site	979329	979333	.	+	.	ID=id1048;gbkey=RBS
NC_003888.3	RefSeq	gene	979340	980104	.	+	.	ID=gene918;Dbxref=GeneID:1096355;Name=SCM10.20;gbkey=Gene;gene=SCM10.20;gene_biotype=protein_coding;gene_synonym=SCM10.20;locus_tag=SCO0932
NC_003888.3	RefSeq	CDS	979340	980104	.	+	0	ID=cds897;Parent=gene918;Dbxref=Genbank:NP_625230.1,GeneID:1096355;Name=NP_625230.1;Note=SCM10.20%2C possible integral membrane protein%2C len: 254 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCM10.20;product=hypothetical protein;protein_id=NP_625230.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	980304	980308	.	+	.	ID=id1049;gbkey=RBS
NC_003888.3	RefSeq	gene	980316	980834	.	+	.	ID=gene919;Dbxref=GeneID:1096356;Name=SCM10.21;gbkey=Gene;gene=SCM10.21;gene_biotype=protein_coding;gene_synonym=SCM10.21;locus_tag=SCO0933
NC_003888.3	RefSeq	CDS	980316	980834	.	+	0	ID=cds898;Parent=gene919;Dbxref=Genbank:NP_625231.1,GeneID:1096356;Name=NP_625231.1;Note=SCM10.21%2C possible lipoprotein%2C len: 172 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCM10.21;product=lipoprotein;protein_id=NP_625231.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	980343	980375	.	+	.	ID=id1050;Dbxref=GeneID:1096356;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCM10.21
NC_003888.3	RefSeq	stem_loop	980851	980896	.	+	.	ID=id1051;gbkey=stem_loop
NC_003888.3	RefSeq	gene	980917	981558	.	-	.	ID=gene920;Dbxref=GeneID:1096357;Name=SCM10.22c;gbkey=Gene;gene=SCM10.22c;gene_biotype=protein_coding;gene_synonym=SCM10.22c;locus_tag=SCO0934
NC_003888.3	RefSeq	CDS	980917	981558	.	-	0	ID=cds899;Parent=gene920;Dbxref=Genbank:NP_625232.1,GeneID:1096357;Name=NP_625232.1;Note=SCM10.22c%2C possible integral membrane protein%2C len: 213 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCM10.22c;product=hypothetical protein;protein_id=NP_625232.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	981729	981733	.	+	.	ID=id1052;gbkey=RBS
NC_003888.3	RefSeq	gene	981742	982407	.	+	.	ID=gene921;Dbxref=GeneID:1096358;Name=SCM10.23;gbkey=Gene;gene=SCM10.23;gene_biotype=protein_coding;gene_synonym=SCM10.23;locus_tag=SCO0935
NC_003888.3	RefSeq	CDS	981742	982407	.	+	0	ID=cds900;Parent=gene921;Dbxref=Genbank:NP_625233.1,GeneID:1096358;Name=NP_625233.1;Note=SCM10.23%2C possible hypothetical protein%2C len: 221 aa. Contains N-terminal region signal peptide sequence;gbkey=CDS;gene=SCM10.23;product=hypothetical protein;protein_id=NP_625233.1;transl_table=11
NC_003888.3	RefSeq	gene	982439	983044	.	-	.	ID=gene922;Dbxref=GeneID:1096359;Name=SCM10.24c;gbkey=Gene;gene=SCM10.24c;gene_biotype=protein_coding;gene_synonym=SCM10.24c;locus_tag=SCO0936
NC_003888.3	RefSeq	CDS	982439	983044	.	-	0	ID=cds901;Parent=gene922;Dbxref=Genbank:NP_625234.1,GeneID:1096359;Name=NP_625234.1;Note=SCM10.24%2C probable oligosaccharide deacetylase%2C len: 201 aa%3B similar to SW:NODB_RHIGA (EMBL:X87578) Rhizobium galegae chitooligosaccharide deacetylase (EC 3.5.1.-) (nodulation protein B) NodB%2C 214 aa%3B fasta scores: opt: 461 z-score: 581.4 E(): 5.4e-25%3B 45.1%25 identity in 153 aa overlap. Contains Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase;gbkey=CDS;gene=SCM10.24c;product=oligosaccharide deacetylase;protein_id=NP_625234.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	982574	983008	.	-	.	ID=id1053;Dbxref=GeneID:1096359;Note=Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase%2C score 206.00%2C E-value 5.9e-58;gbkey=misc_feature;gene=SCM10.24c
NC_003888.3	RefSeq	gene	983389	983850	.	+	.	ID=gene923;Dbxref=GeneID:1096360;Name=SCM10.25;gbkey=Gene;gene=SCM10.25;gene_biotype=protein_coding;gene_synonym=SCM10.25;locus_tag=SCO0937
NC_003888.3	RefSeq	CDS	983389	983850	.	+	0	ID=cds902;Parent=gene923;Dbxref=Genbank:NP_625235.1,GeneID:1096360;Name=NP_625235.1;Note=SCM10.25%2C hypothetical protein%2C len: 153 aa%3B similar to various hypothetical proteins%2C e.g. TR:BAA86264 (EMBL:AB023785) Streptomyces griseus ORF2%2C 173 aa%3B fasta scores: opt: 218 z-score: 266.9 E(): 1.8e-07%3B 35.5%25 identity in 138 aa overlap;gbkey=CDS;gene=SCM10.25;product=hypothetical protein;protein_id=NP_625235.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	983964	983967	.	+	.	ID=id1054;gbkey=RBS
NC_003888.3	RefSeq	gene	983971	985377	.	+	.	ID=gene924;Dbxref=GeneID:1096361;Name=SCM10.26;gbkey=Gene;gene=SCM10.26;gene_biotype=protein_coding;gene_synonym=SCM10.26;locus_tag=SCO0938
NC_003888.3	RefSeq	CDS	983971	985377	.	+	0	ID=cds903;Parent=gene924;Dbxref=Genbank:NP_625236.1,GeneID:1096361;Name=NP_625236.1;Note=SCM10.26%2C probable amino acid transporter%2C len: 468 aa%3B similar to TR:O69844 (EMBL:AL023702) Streptomyces coelicolor  cationic amino acid transporter SC1C3.02%2C 503 aa%3B fasta scores: opt: 829 z-score: 890.5 E(): 0%3B 45.9%25 identity in 490 aa overlap and to SW:CTR2_HUMAN (EMBL:D29990) Homo sapiens (Human) low-affinity cationic amino acid transporter-2 AtrC2%2C 658 aa%3B fasta scores: opt: 446 z-score: 480.4 E(): 2.3e-19%3B 32.8%25 identity in 430 aa overlap. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and match to Prosite entry PS00165 Ser/Thr dehydratases pyridoxal-phosphate attachment site;gbkey=CDS;gene=SCM10.26;product=amino acid transporter;protein_id=NP_625236.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	984052	985359	.	+	.	ID=id1055;Dbxref=GeneID:1096361;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -27.10%2C E-value 1.4e-11;gbkey=misc_feature;gene=SCM10.26
NC_003888.3	RefSeq	sequence_feature	984838	984882	.	+	.	ID=id1056;Dbxref=GeneID:1096361;Note=PS00165 Ser/Thr dehydratases pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SCM10.26
NC_003888.3	RefSeq	gene	985374	986237	.	-	.	ID=gene925;Dbxref=GeneID:1096362;Name=SCM10.27c;gbkey=Gene;gene=SCM10.27c;gene_biotype=protein_coding;gene_synonym=SCM10.27c;locus_tag=SCO0939
NC_003888.3	RefSeq	CDS	985374	986237	.	-	0	ID=cds904;Parent=gene925;Dbxref=Genbank:NP_625237.1,GeneID:1096362;Name=NP_625237.1;Note=SCM10.27c%2C probable hydrolase%2C len: 287 aa%3B similar to TR:CAB56657 (EMBL:AL121596) Streptomyces coelicolor hydrolase SCF51A.05%2C 278 aa%3B fasta scores: opt: 325 z-score: 381.1 E(): 7.7e-14%3B 32.9%25 identity in 283 aa overlap and to SW:PRXC_STRAU (EMBL:AF031242) Streptomyces aureofaciens non-heme chloroperoxidase (EC 1.11.1.10) CpoT%2C 278 aa%3B fasta scores: opt: 239 z-score: 282.3 E(): 2.5e-08%3B 30.4%25 identity in 253 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SCM10.27c;product=hydrolase;protein_id=NP_625237.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	985386	986036	.	-	.	ID=id1057;Dbxref=GeneID:1096362;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 74.70%2C E-value 1.9e-18;gbkey=misc_feature;gene=SCM10.27c
NC_003888.3	RefSeq	gene	986247	986720	.	+	.	ID=gene926;Dbxref=GeneID:1096363;Name=SCM10.28;gbkey=Gene;gene=SCM10.28;gene_biotype=protein_coding;gene_synonym=SCM10.28;locus_tag=SCO0940
NC_003888.3	RefSeq	CDS	986247	986720	.	+	0	ID=cds905;Parent=gene926;Dbxref=Genbank:NP_625238.1,GeneID:1096363;Name=NP_625238.1;Note=SCM10.28%2C possible marR-family regulatory protein%2C len: 157 aa%3B weakly similar to TR:O07458 (EMBL:U75363) Rhodopseudomonas palustris regulatory protein%2C 175 aa%3B fasta scores: opt: 150 z-score: 189.7 E(): 0.0036%3B 28.1%25 identity in 160 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SCM10.28;product=MarR family regulatory protein;protein_id=NP_625238.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	986376	986687	.	+	.	ID=id1058;Dbxref=GeneID:1096363;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 40.20%2C E-value 4.7e-08;gbkey=misc_feature;gene=SCM10.28
NC_003888.3	RefSeq	gene	986722	987876	.	-	.	ID=gene927;Dbxref=GeneID:1096364;Name=SCM10.29c;gbkey=Gene;gene=SCM10.29c;gene_biotype=protein_coding;gene_synonym=SCM10.29c;locus_tag=SCO0941
NC_003888.3	RefSeq	CDS	986722	987876	.	-	0	ID=cds906;Parent=gene927;Dbxref=Genbank:NP_625239.1,GeneID:1096364;Name=NP_625239.1;Note=SCM10.29c%2C possible lipoprotein%2C len: 384 aa%3B weakly similar to SW:CAPA_BACAN (EMBL:M24150) Bacillus anthracis CapA protein%2C 411 aa%3B fasta scores: opt: 270 z-score: 296.6 E(): 4e-09%3B 24.0%25 identity in 338 aa overlap. Contains match correctly situated to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCM10.29c;product=lipoprotein;protein_id=NP_625239.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	987811	987843	.	-	.	ID=id1059;Dbxref=GeneID:1096364;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCM10.29c
NC_003888.3	RefSeq	ribosome_entry_site	987884	987887	.	-	.	ID=id1060;gbkey=RBS
NC_003888.3	RefSeq	gene	988130	988684	.	+	.	ID=gene928;Dbxref=GeneID:1096365;Name=SCM10.30;gbkey=Gene;gene=SCM10.30;gene_biotype=protein_coding;gene_synonym=SCM10.30;locus_tag=SCO0942
NC_003888.3	RefSeq	CDS	988130	988684	.	+	0	ID=cds907;Parent=gene928;Dbxref=Genbank:NP_625240.1,GeneID:1096365;Name=NP_625240.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B in M. tuberculosis this protein regulates polyketide synthases and  or membrane proteins;gbkey=CDS;gene=SCM10.30;product=RNA polymerase sigma factor SigL;protein_id=NP_625240.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	988226	988438	.	+	.	ID=id1061;Dbxref=GeneID:1096365;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 50.40%2C E-value 3.9e-11;gbkey=misc_feature;gene=SCM10.30
NC_003888.3	RefSeq	ribosome_entry_site	988820	988824	.	+	.	ID=id1062;gbkey=RBS
NC_003888.3	RefSeq	gene	988826	989341	.	+	.	ID=gene929;Dbxref=GeneID:1096366;Name=SCM10.31;gbkey=Gene;gene=SCM10.31;gene_biotype=protein_coding;gene_synonym=SCM10.31;locus_tag=SCO0943
NC_003888.3	RefSeq	CDS	988826	989341	.	+	0	ID=cds908;Parent=gene929;Dbxref=Genbank:NP_625241.1,GeneID:1096366;Name=NP_625241.1;Note=SCM10.31%2C unknown%2C len: 171 aa;gbkey=CDS;gene=SCM10.31;product=hypothetical protein;protein_id=NP_625241.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	989549	989552	.	+	.	ID=id1063;gbkey=RBS
NC_003888.3	RefSeq	gene	989560	990210	.	+	.	ID=gene930;Dbxref=GeneID:1096367;Name=SCM10.32;gbkey=Gene;gene=SCM10.32;gene_biotype=protein_coding;gene_synonym=SCM10.32;locus_tag=SCO0944
NC_003888.3	RefSeq	CDS	989560	990210	.	+	0	ID=cds909;Parent=gene930;Dbxref=Genbank:NP_625242.1,GeneID:1096367;Name=NP_625242.1;Note=SCM1032%2C possible membrane protein%2C len: 216 aa%3B similar to TR:O53799 (EMBL:AL021958) Mycobacterium tuberculosis%2C and Mycobacterium bovis hypothetical 25.9 kD protein MTV041.10%2C 250 aa%3B fasta scores: opt: 180 z-score: 217.2 E(): 0.0001%3B 34.3%25 identity in 216 aa overlap and to S. coelicolor StF56.17%2C 250 aa%3B fasta scores: opt: 137 z-score: 133.5 E(): 0.05%3B 31.2%25 identity in 247 aa overlap;gbkey=CDS;gene=SCM10.32;product=hypothetical protein;protein_id=NP_625242.1;transl_table=11
NC_003888.3	RefSeq	gene	990249	991112	.	-	.	ID=gene931;Dbxref=GeneID:1096368;Name=SCM10.34c;gbkey=Gene;gene=SCM10.34c;gene_biotype=protein_coding;gene_synonym=SCM10.34c;locus_tag=SCO0945
NC_003888.3	RefSeq	CDS	990249	991112	.	-	0	ID=cds910;Parent=gene931;Dbxref=Genbank:NP_625243.1,GeneID:1096368;Name=NP_625243.1;Note=SCM10.34c%2C probable formamidopyrimidine-DNA glycosylase len: 287 aa%3B similar to TR:P71565 (EMBL:Z79700) Mycobacterium tuberculosis hypothetical 16.5k kD protein MTYC10D7.30c%2C 158 aa%3B fasta scores: opt: 608 z-score: 707.4 E(): 5.2e-32%3B 59.0%25 identity in 156 aa overlap and to SW:FPG_SYNEN (EMBL:Y10290) Synechococcus elongatus naegeli formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) MutM%2C 284 aa%3B fasta scores: opt: 426 z-score: 495.1 E(): 3.4e-20%3B 33.6%25 identity in 283 aa overlap. Contains Pfam match to entry PF01149 Fapy_DNA_glyco%2C Formamidopyrimidine-DNA glycosylase;gbkey=CDS;gene=SCM10.34c;product=formamidopyrimidine-DNA glycosylase;protein_id=NP_625243.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	990300	991112	.	-	.	ID=id1064;Dbxref=GeneID:1096368;Note=Pfam match to entry PF01149 Fapy_DNA_glyco%2C Formamidopyrimidine-DNA glycosylase%2C score 82.90%2C E-value 6.4e-21;gbkey=misc_feature;gene=SCM10.34c
NC_003888.3	RefSeq	gene	991153	993243	.	-	.	ID=gene932;Dbxref=GeneID:1096369;Name=SCM10.35c;gbkey=Gene;gene=SCM10.35c;gene_biotype=protein_coding;gene_synonym=SCM10.35c,SCM11.01c;locus_tag=SCO0946
NC_003888.3	RefSeq	CDS	991153	993243	.	-	0	ID=cds911;Parent=gene932;Dbxref=Genbank:NP_733518.1,GeneID:1096369;Name=NP_733518.1;Note=SCM11.01c%2C hypothetical protein%2C len: >587 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q9ZBJ0 (EMBL:AL035161) Streptomyces coelicolor conserved hypothetical protein SC9C7.20%2C 860 aa%3B fasta scores: opt: 588 z-score: 654.5 E(): 4.4e-29%3B 30.4%25 identity in 542 aa overlap~SCM10.35c%2C possible regulatory protein%2C (partial CDS)%2C len: >141 aa%3B similar to TR:Q9ZBT2 (EMBL:AL034446)Streptomyces coelicolor  regulatory protein SC1A9.20%2C 135 aa%3B fasta scores: opt: 286 z-score: 366.0 E(): 5.3e-13%3B 42.4%25 identity in 132 aa overlap;gbkey=CDS;gene=SCM10.35c;product=regulatory protein;protein_id=NP_733518.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	993353	993358	.	+	.	ID=id1065;gbkey=RBS
NC_003888.3	RefSeq	gene	993366	994778	.	+	.	ID=gene933;Dbxref=GeneID:1096370;Name=SCM11.02;gbkey=Gene;gene=SCM11.02;gene_biotype=protein_coding;gene_synonym=SCM11.02;locus_tag=SCO0947
NC_003888.3	RefSeq	CDS	993366	994778	.	+	0	ID=cds912;Parent=gene933;Dbxref=Genbank:NP_625244.1,GeneID:1096370;Name=NP_625244.1;Note=SCM11.02%2C possible integral membrane protein%2C len: 470 aa%3B similar to TR:P96418 (EMBL:Z92669) Mycobacterium tuberculosis hypothetical 54.8 kD protein MTCY08D5.31c%2C 482 aa%3B fasta scores: opt: 2112 z-score: 2527.5 E(): 0%3B 61.9%25 identity in 472 aa overlap and to TR:O69633 (EMBL:AL022121) Mycobacterium tuberculosis peptide transport system permease%3B fasta scores: opt: 122 z-score: 149.8 E(): 0.58%3B 27.7%25 identity in 166 aa overlap;gbkey=CDS;gene=SCM11.02;product=hypothetical protein;protein_id=NP_625244.1;transl_table=11
NC_003888.3	RefSeq	gene	994798	997821	.	-	.	ID=gene934;Dbxref=GeneID:1096371;Name=SCM11.03c;gbkey=Gene;gene=SCM11.03c;gene_biotype=protein_coding;gene_synonym=SCM11.03c;locus_tag=SCO0948
NC_003888.3	RefSeq	CDS	994798	997821	.	-	0	ID=cds913;Parent=gene934;Dbxref=Genbank:NP_625245.1,GeneID:1096371;Name=NP_625245.1;Note=SCM11.03c%2C possible alpha-mannosidase%2C len: 1007 aa%3B similar to TR:AAC00190 (EMBL:AF044414) Homo sapiens alpha-mannosidase 6A8B%2C 1062 aa%3B fasta scores: opt: 1326 z-score: 1446.5 E(): 0%3B 37.8%25 identity in 1013 aa overlap and to SW:MAN1_RAT (EMBL:M57547) Rattus norvegicus alpha-mannosidase (EC 3.2.1.24)%2C 1040 aa%3B fasta scores: opt: 1285 z-score: 1401.8 E(): 0%3B 35.9%25 identity in 1041 aa overlap;gbkey=CDS;gene=SCM11.03c;product=alpha-mannosidase;protein_id=NP_625245.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	997829	997832	.	-	.	ID=id1066;gbkey=RBS
NC_003888.3	RefSeq	gene	997963	999210	.	-	.	ID=gene935;Dbxref=GeneID:1096372;Name=SCM11.04c;gbkey=Gene;gene=SCM11.04c;gene_biotype=protein_coding;gene_synonym=SCM11.04c;locus_tag=SCO0949
NC_003888.3	RefSeq	CDS	997963	999210	.	-	0	ID=cds914;Parent=gene935;Dbxref=Genbank:NP_625246.1,GeneID:1096372;Name=NP_625246.1;Note=SCM11.04c%2C hypothetical protein%2C len: 415 aa%3B similar to TR:CAB56687 (EMBL:AL121596) Streptomyces coelicolor hypothetical 71.4 kD protein SCF51A.35%2C 644 aa%3B fasta scores: opt: 205 z-score: 234.7 E(): 1.1e-05%3B 26.0%25 identity in 408 aa overlap;gbkey=CDS;gene=SCM11.04c;product=hypothetical protein;protein_id=NP_625246.1;transl_table=11
NC_003888.3	RefSeq	gene	999242	1000162	.	-	.	ID=gene936;Dbxref=GeneID:1096373;Name=SCM11.05c;gbkey=Gene;gene=SCM11.05c;gene_biotype=protein_coding;gene_synonym=SCM11.05c;locus_tag=SCO0950
NC_003888.3	RefSeq	CDS	999242	1000162	.	-	0	ID=cds915;Parent=gene936;Dbxref=Genbank:NP_625247.1,GeneID:1096373;Name=NP_625247.1;Note=SCM11.05c%2C probable transport system permease%2C len: 306 aa%3B similar to TR:P73854 (EMBL:D90910) Synechocystis sp. lactose transport system permease LacG%2C 270 aa%3B fasta scores: opt: 688 z-score: 826.9 E(): 0%3B 39.2%25 identity in 273 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SCM11.05c;product=transport system permease;protein_id=NP_625247.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	999244	1002390	.	-	.	ID=id1067;Note=binding protein-dependent transport operon. The source of a spurious hybridisation signal with an ftsZ probe that led to its description as ftsZ2 in Redenbach et al%2C 1996;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	999365	999595	.	-	.	ID=id1068;Dbxref=GeneID:1096373;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.00%2C E-value 2e-13;gbkey=misc_feature;gene=SCM11.05c
NC_003888.3	RefSeq	sequence_feature	999506	999592	.	-	.	ID=id1069;Dbxref=GeneID:1096373;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCM11.05c
NC_003888.3	RefSeq	gene	1000159	1001091	.	-	.	ID=gene937;Dbxref=GeneID:1096374;Name=SCM11.06c;gbkey=Gene;gene=SCM11.06c;gene_biotype=protein_coding;gene_synonym=SCM11.06c;locus_tag=SCO0951
NC_003888.3	RefSeq	CDS	1000159	1001091	.	-	0	ID=cds916;Parent=gene937;Dbxref=Genbank:NP_625248.1,GeneID:1096374;Name=NP_625248.1;Note=SCM11.06c%2C probable transport system permease%2C len: 310 aa%3B similar to TR:P73352 (EMBL:D90905) Synechocystis sp. lactose transport system permease LacF%2C 298 aa%3B fasta scores: opt: 750 z-score: 885.7 E(): 0%3B 44.9%25 identity in 292 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and to prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SCM11.06c;product=transport system permease;protein_id=NP_625248.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1000166	1000171	.	-	.	ID=id1070;Dbxref=GeneID:1096374;gbkey=RBS;gene=SCM11.06c
NC_003888.3	RefSeq	sequence_feature	1000273	1000509	.	-	.	ID=id1071;Dbxref=GeneID:1096374;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 46.90%2C E-value 4.6e-10;gbkey=misc_feature;gene=SCM11.06c
NC_003888.3	RefSeq	sequence_feature	1000420	1000506	.	-	.	ID=id1072;Dbxref=GeneID:1096374;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCM11.06c
NC_003888.3	RefSeq	gene	1001098	1002390	.	-	.	ID=gene938;Dbxref=GeneID:1096375;Name=SCM11.07c;gbkey=Gene;gene=SCM11.07c;gene_biotype=protein_coding;gene_synonym=SCM11.07c;locus_tag=SCO0952
NC_003888.3	RefSeq	CDS	1001098	1002390	.	-	0	ID=cds917;Parent=gene938;Dbxref=Genbank:NP_625249.1,GeneID:1096375;Name=NP_625249.1;Note=SCM11.07c%2C possible solute-binding protein%2C len: 430 aa%3B similar to TR:P73325 (EMBL:D90905) Synechocystis sp SrrA%2C 433 aa%3B fasta scores: opt: 611 z-score: 678.3 E(): 2.1e-30%3B 29.8%25 identity in 430 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCM11.07c;product=solute-binding protein;protein_id=NP_625249.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1001119	1001958	.	-	.	ID=id1073;Dbxref=GeneID:1096375;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 93.20%2C E-value 5.2e-24;gbkey=misc_feature;gene=SCM11.07c
NC_003888.3	RefSeq	ribosome_entry_site	1002400	1002404	.	-	.	ID=id1074;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1002614	1002618	.	+	.	ID=id1075;gbkey=RBS
NC_003888.3	RefSeq	gene	1002624	1003673	.	+	.	ID=gene939;Dbxref=GeneID:1096376;Name=SCM11.08;gbkey=Gene;gene=SCM11.08;gene_biotype=protein_coding;gene_synonym=SCM11.08;locus_tag=SCO0953
NC_003888.3	RefSeq	CDS	1002624	1003673	.	+	0	ID=cds918;Parent=gene939;Dbxref=Genbank:NP_625250.1,GeneID:1096376;Name=NP_625250.1;Note=SCM11.08%2C probable lacI-family transcriptional regulator%2C len: 349 aa%3B similar to TR:O86598 (EMBL:AL031514) Streptomyces coelicolor transcriptional regulator%2C SC2H4.15%2C 342 aa%3B fasta scores opt: 949 z-score: 1067.0 E(): 0%3B 44.6%25 identity in 341 aa overlap and to SW:ASCG_ECOLI (EMBL:M73326) Escherichia coli cryptic asc operon repressor%2C 336 aa%3B fasta scores: opt: 409 z-score: 463.9 E(): 1.8e-18%3B 28.4%25 identity in 334 aa overlap. Contains Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 37.90%2C E-value 3.1e-09 and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and Prosite match to entry PS00356 Bacterial regulatory proteins%2C lacI family signature. Contains also a possible helix-turn-helix motif at residues 11..32 (+5.76 SD);gbkey=CDS;gene=SCM11.08;product=LacI family transcriptional regulator;protein_id=NP_625250.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1002648	1002731	.	+	.	ID=id1076;Dbxref=GeneID:1096376;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 37.90%2C E-value 3.1e-09;gbkey=misc_feature;gene=SCM11.08
NC_003888.3	RefSeq	sequence_feature	1002660	1002716	.	+	.	ID=id1077;Dbxref=GeneID:1096376;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCM11.08
NC_003888.3	RefSeq	sequence_feature	1002822	1003562	.	+	.	ID=id1078;Dbxref=GeneID:1096376;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 39.10%2C E-value 1.9e-08;gbkey=misc_feature;gene=SCM11.08
NC_003888.3	RefSeq	gene	1003996	1004478	.	-	.	ID=gene940;Dbxref=GeneID:1096377;Name=SCM11.09c;gbkey=Gene;gene=SCM11.09c;gene_biotype=protein_coding;gene_synonym=SCM11.09c;locus_tag=SCO0954
NC_003888.3	RefSeq	CDS	1003996	1004478	.	-	0	ID=cds919;Parent=gene940;Dbxref=Genbank:NP_625251.1,GeneID:1096377;Name=NP_625251.1;Note=SCM11.09c%2C possible acetyltransferase%2C len: 160 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q51670 (EMBL:U34346) Paracoccus denitrificans hypothetical 18.8 kD protein%2C 173 aa%3B fasta scores: opt: 427 z-score: 515.7 E(): 2.4e-21%3B 45.3%25 identity in 161 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCM11.09c;product=acetyltransferase;protein_id=NP_625251.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1004077	1004472	.	-	.	ID=id1079;Dbxref=GeneID:1096377;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 53.50%2C E-value 4.6e-12;gbkey=misc_feature;gene=SCM11.09c
NC_003888.3	RefSeq	gene	1004534	1004710	.	-	.	ID=gene941;Dbxref=GeneID:1096378;Name=SCM11.10c;gbkey=Gene;gene=SCM11.10c;gene_biotype=protein_coding;gene_synonym=SCM11.10c;locus_tag=SCO0955
NC_003888.3	RefSeq	CDS	1004534	1004710	.	-	0	ID=cds920;Parent=gene941;Dbxref=Genbank:NP_625252.1,GeneID:1096378;Name=NP_625252.1;Note=SCM11.10c%2C unknown%2C len: 58 aa;gbkey=CDS;gene=SCM11.10c;product=hypothetical protein;protein_id=NP_625252.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1004717	1004721	.	-	.	ID=id1080;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1005173	1005178	.	+	.	ID=id1081;gbkey=RBS
NC_003888.3	RefSeq	gene	1005186	1005641	.	+	.	ID=gene942;Dbxref=GeneID:1096379;Name=SCM11.11;gbkey=Gene;gene=SCM11.11;gene_biotype=protein_coding;gene_synonym=SCM11.11;locus_tag=SCO0956
NC_003888.3	RefSeq	CDS	1005186	1005641	.	+	0	ID=cds921;Parent=gene942;Dbxref=Genbank:NP_625253.1,GeneID:1096379;Name=NP_625253.1;Note=SCM11.11%2C unknown%2C len: 151 aa;gbkey=CDS;gene=SCM11.11;product=hypothetical protein;protein_id=NP_625253.1;transl_table=11
NC_003888.3	RefSeq	gene	1005700	1007202	.	-	.	ID=gene943;Dbxref=GeneID:1096380;Name=SCM11.12c;gbkey=Gene;gene=SCM11.12c;gene_biotype=protein_coding;gene_synonym=SCM11.12c;locus_tag=SCO0957
NC_003888.3	RefSeq	CDS	1005700	1007202	.	-	0	ID=cds922;Parent=gene943;Dbxref=Genbank:NP_625254.1,GeneID:1096380;Name=NP_625254.1;Note=SCM11.12c%2C possible oxidoreductase%2C len: 500 aa%3B C-terminus similar to SW:OXIR_STRAT (EMBL:M96551) Streptomyces antibioticus probable oxidoreductase (EC 1.-.-.-)%2C 298 aa%3B fasta scores: opt: 169 z-score: 197.8 E(): 0.0012%3B 32.0%25 identity in 150 aa overlap;gbkey=CDS;gene=SCM11.12c;product=oxidoreductase;protein_id=NP_625254.1;transl_table=11
NC_003888.3	RefSeq	gene	1007306	1008646	.	-	.	ID=gene944;Dbxref=GeneID:1096381;Name=SCM11.13c;gbkey=Gene;gene=SCM11.13c;gene_biotype=protein_coding;gene_synonym=SCM11.13c;locus_tag=SCO0958
NC_003888.3	RefSeq	CDS	1007306	1008646	.	-	0	ID=cds923;Parent=gene944;Dbxref=Genbank:NP_625255.1,GeneID:1096381;Name=NP_625255.1;Note=SCM11.13c%2C hypothetical protein%2C len: 446 aa%3B similar to various Mycobacterium tuberculosis hypothetical proteins%2C e.g. TR:O07035 (EMBL:Z95150) Mycobacterium tuberculosis hypothetical 50.7 kD protein RV3130c%2C 463 aa%3B fasta scores: opt: 491 z-score: 529.2 E(): 4.3e-22%3B 30.2%25 identity in 464 aa overlap;gbkey=CDS;gene=SCM11.13c;product=hypothetical protein;protein_id=NP_625255.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1008654	1008657	.	-	.	ID=id1082;gbkey=RBS
NC_003888.3	RefSeq	gene	1008835	1011153	.	-	.	ID=gene945;Dbxref=GeneID:1096382;Name=SCM11.14c;gbkey=Gene;gene=SCM11.14c;gene_biotype=protein_coding;gene_synonym=SCM11.14c;locus_tag=SCO0959
NC_003888.3	RefSeq	CDS	1008835	1011153	.	-	0	ID=cds924;Parent=gene945;Dbxref=Genbank:NP_625256.1,GeneID:1096382;Name=NP_625256.1;Note=SCM11.14c%2C possible hypothetical protein%2C len: 772 aa%3B similar to N-terminus of TR:O69822 (EMBL:AL023496) Streptomyces coelicolor hypothetical protein SC1A6.17c%2C 2314 aa%3B fasta scores: opt: 444 z-score: 500.2 E(): 1.8e-20%3B 30.0%25 identity in 818 aa overlap and low similarities to TR: (EMBL:) Pseudomonas sp. acetaldehyde dehydrigenase (acylating) PhnI%2C 312 aa%3B fasta scores: opt: 125 z-score: 146.1 E(): 0.92%3B 23.7%25 identity in 177 aa overlap . Contains possible signal peptide sequence;gbkey=CDS;gene=SCM11.14c;product=hypothetical protein;protein_id=NP_625256.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1011163	1011167	.	-	.	ID=id1083;gbkey=RBS
NC_003888.3	RefSeq	gene	1011212	1013830	.	-	.	ID=gene946;Dbxref=GeneID:1096383;Name=SCM11.15c;gbkey=Gene;gene=SCM11.15c;gene_biotype=protein_coding;gene_synonym=SCM11.15c;locus_tag=SCO0960
NC_003888.3	RefSeq	CDS	1011212	1013830	.	-	0	ID=cds925;Parent=gene946;Dbxref=Genbank:NP_625257.1,GeneID:1096383;Name=NP_625257.1;Note=SCM11.15c%2C possible hydrolase (hypothetical protein)%2C len: 872 aa%3B similar to TR:Q9X0F2 (EMBL:AE001766) Thermotoga maritima beta-glucuronidase TM1062%2C 563 aa%3B fasta scores: opt: 420 z-score: 447.6 E(): 1.5e-17%3B 28.3%25 identity in 406 aa overlap and to SW:BGLR_ECOLI (EMBL:M14641) Escherichia coli beta-glucuronidase (EC 3.2.1.31) UidA or GusA or GurA%2C 603 aa%3B fasta scores: opt: 359 z-score: 382.2 E(): 6.6e-14%3B 26.2%25 identity in 454 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCM11.15c;product=hydrolase;protein_id=NP_625257.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1013835	1013840	.	-	.	ID=id1084;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	1013849	1017046	.	-	.	ID=id1085;Note=previously sequenced region (EMBL:AJ243803);gbkey=misc_feature
NC_003888.3	RefSeq	gene	1014030	1015250	.	-	.	ID=gene947;Dbxref=GeneID:1096384;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;gene_synonym=SCM11.16c;locus_tag=SCO0961
NC_003888.3	RefSeq	CDS	1014030	1015250	.	-	0	ID=cds926;Parent=gene947;Dbxref=Genbank:NP_625258.2,GeneID:1096384;Name=NP_625258.2;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=NP_625258.2;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1014039	1014125	.	-	.	ID=id1086;Dbxref=GeneID:1096384;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=glgC
NC_003888.3	RefSeq	sequence_feature	1014408	1015226	.	-	.	ID=id1087;Dbxref=GeneID:1096384;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C score 302.00%2C E-value 7.1e-87;gbkey=misc_feature;gene=glgC
NC_003888.3	RefSeq	sequence_feature	1014627	1014659	.	-	.	ID=id1088;Dbxref=GeneID:1096384;Note=PS00810 ADP-glucose pyrophosphorylase signature 3;gbkey=misc_feature;gene=glgC
NC_003888.3	RefSeq	sequence_feature	1014930	1014956	.	-	.	ID=id1089;Dbxref=GeneID:1096384;Note=PS00809 ADP-glucose pyrophosphorylase signature 2;gbkey=misc_feature;gene=glgC
NC_003888.3	RefSeq	sequence_feature	1015152	1015211	.	-	.	ID=id1090;Dbxref=GeneID:1096384;Note=PS00808 ADP-glucose pyrophosphorylase signature 1;gbkey=misc_feature;gene=glgC
NC_003888.3	RefSeq	ribosome_entry_site	1015237	1015241	.	-	.	ID=id1091;Dbxref=GeneID:1096384;gbkey=RBS;gene=glgC
NC_003888.3	RefSeq	gene	1015300	1016463	.	-	.	ID=gene948;Dbxref=GeneID:1096385;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;gene_synonym=glgA,SCM11.17c;locus_tag=SCO0962
NC_003888.3	RefSeq	CDS	1015300	1016463	.	-	0	ID=cds927;Parent=gene948;Dbxref=Genbank:NP_625259.1,GeneID:1096385;Name=NP_625259.1;Note=SCM11.17c%2C glgA%2C glycosyl transferase%2C len: 387 aa%3B identical to previously sequenced TR:Q9X9U5 (EMBL:AJ243803) Streptomyces coelicolor glycosyl transferase%2C GlgA%2C 387 and similar to TR:Q9X7Z1 (EMBL:AL049497) Streptomyces coelicolor glycosyl transferase SC6G10.05c%2C 412 aa%3B fasta scores: opt: 352 z-score: 421.1 E(): 4.4e-16%3B 29.3%25 identity in 403 aa overlap. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1;gbkey=CDS;gene=glgA;product=glycosyl transferase;protein_id=NP_625259.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1015378	1015671	.	-	.	ID=id1092;Dbxref=GeneID:1096385;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 71.30%2C E-value 2.8e-19;gbkey=misc_feature;gene=glgA
NC_003888.3	RefSeq	ribosome_entry_site	1016470	1016474	.	-	.	ID=id1093;gbkey=RBS
NC_003888.3	RefSeq	gene	1016501	1017394	.	-	.	ID=gene949;Dbxref=GeneID:1096386;Name=SCM11.18c;gbkey=Gene;gene=SCM11.18c;gene_biotype=protein_coding;gene_synonym=SCM11.18c;locus_tag=SCO0963
NC_003888.3	RefSeq	CDS	1016501	1017394	.	-	0	ID=cds928;Parent=gene949;Dbxref=Genbank:NP_625260.1,GeneID:1096386;Name=NP_625260.1;Note=SCM11.18c%2C hypothetical protein%2C len: 297 aa%3B C-terminal region identical to previously sequenced TR:Q9X9U6 (EMBL:AJ243803) Streptomyces coelicolor hypothetical 18.7 kD protein (fragment)%2C 181 aa. Contains proline-rich C-terminal region;gbkey=CDS;gene=SCM11.18c;product=hypothetical protein;protein_id=NP_625260.1;transl_table=11
NC_003888.3	RefSeq	gene	1017707	1018138	.	-	.	ID=gene950;Dbxref=GeneID:1096387;Name=SCM11.19c;gbkey=Gene;gene=SCM11.19c;gene_biotype=protein_coding;gene_synonym=SCM11.19c;locus_tag=SCO0964
NC_003888.3	RefSeq	CDS	1017707	1018138	.	-	0	ID=cds929;Parent=gene950;Dbxref=Genbank:NP_625261.1,GeneID:1096387;Name=NP_625261.1;Note=SCM11.19c%2C unknown%2C len: 143 aa;gbkey=CDS;gene=SCM11.19c;product=hypothetical protein;protein_id=NP_625261.1;transl_table=11
NC_003888.3	RefSeq	gene	1018179	1018838	.	-	.	ID=gene951;Dbxref=GeneID:1096388;Name=SCM11.20c;gbkey=Gene;gene=SCM11.20c;gene_biotype=protein_coding;gene_synonym=SCM11.20c;locus_tag=SCO0965
NC_003888.3	RefSeq	CDS	1018179	1018838	.	-	0	ID=cds930;Parent=gene951;Dbxref=Genbank:NP_625262.1,GeneID:1096388;Name=NP_625262.1;Note=SCM11.20c%2C conserved hypothetical protein%2C len: 219 aa%3B similar to TR:O50637 (EMBL:AB010203) Leptospira interrogans hypothetical 23.2 kD protein%2C 216 aa%3B fasta scores: opt: 197 z-score: 222.5 E(): 5.1e-05%3B 27.5%25 identity in 182 aa overlap and to TR:Q98N90 (EMBL:AP002994) Rhizobium loti (Mesorhizobium loti) MLL0243 protein%2C 231 aa%3B fasta scores: opt: 545 Z-score: 593.3 E(): 2e-25%3B 48.00%25 identity in 200 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCM11.20c;product=hypothetical protein;protein_id=NP_625262.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1018593	1018616	.	-	.	ID=id1094;Dbxref=GeneID:1096388;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCM11.20c
NC_003888.3	RefSeq	gene	1018944	1019903	.	-	.	ID=gene952;Dbxref=GeneID:1096389;Name=SCM11.21c;gbkey=Gene;gene=SCM11.21c;gene_biotype=protein_coding;gene_synonym=SCM11.21c;locus_tag=SCO0966
NC_003888.3	RefSeq	CDS	1018944	1019903	.	-	0	ID=cds931;Parent=gene952;Dbxref=Genbank:NP_625263.1,GeneID:1096389;Name=NP_625263.1;Note=SCM11.21c%2C probable dehydratase%2C len: 319 aa%3B similar to TR:Q9Y7K4 (EMBL:AL049495) Schizosaccharomyces pombe hypothetical 31.5 kD protein%2C 295 aa%3B fasta scores opt: 478 z-score: 525.2 E(): 7.1e-22%3B 40.1%25 identity in 312 aa overlap and to TR:O69128 (EMBL:AF064070) Burkholderia pseudomallai epimerase/dehydratase WbiG%2C 321 aa%3B fasta scores: opt: 231 z-score: 257.9 E(): 5.5e-07%3B 26.8%25 identity in 314 aa overlap. Contains match to Prosite entry PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=CDS;gene=SCM11.21c;product=dehydratase;protein_id=NP_625263.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1019790	1019834	.	-	.	ID=id1095;Dbxref=GeneID:1096389;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=SCM11.21c
NC_003888.3	RefSeq	ribosome_entry_site	1019908	1019913	.	-	.	ID=id1096;gbkey=RBS
NC_003888.3	RefSeq	gene	1019971	1020594	.	-	.	ID=gene953;Dbxref=GeneID:1096390;Name=SCM11.22c;gbkey=Gene;gene=SCM11.22c;gene_biotype=protein_coding;gene_synonym=SCM11.22c;locus_tag=SCO0967
NC_003888.3	RefSeq	CDS	1019971	1020594	.	-	0	ID=cds932;Parent=gene953;Dbxref=Genbank:NP_625264.1,GeneID:1096390;Name=NP_625264.1;Note=SCM11.22c%2C possible reductase%2C len: 207 aa%3B similar to SW:F4RE_METJA (EMBL:U67591) Methanococcus jannaschii F420-dependent NADP reductase (EC 1.-.-.-) MJ1501%2C 223 aa%3B fasta scores: opt: 209 z-score: 243.7 E(): 3.4e-06%3B 27.9%25 identity in 197 aa overlap and to SCM11.25c%2C 207 aa%3B fasta scores: opt: 761 z-score: 757.9 E(): 0%3B 60.3%25 identity in 204 aa overlap;gbkey=CDS;gene=SCM11.22c;product=reductase;protein_id=NP_625264.1;transl_table=11
NC_003888.3	RefSeq	gene	1020695	1021237	.	-	.	ID=gene954;Dbxref=GeneID:1096391;Name=SCM11.23c;gbkey=Gene;gene=SCM11.23c;gene_biotype=protein_coding;gene_synonym=SCM11.23c;locus_tag=SCO0968
NC_003888.3	RefSeq	CDS	1020695	1021237	.	-	0	ID=cds933;Parent=gene954;Dbxref=Genbank:NP_625265.1,GeneID:1096391;Name=NP_625265.1;Note=SCM11.23c%2C hypothetical protein%2C len: 180 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q9ZBF0 (EMBL:AL035206) Streptomyces coelicolor hypothetical 31.5 kD protein%2C 289 aa%3B fasta scores: opt: 162 z-score: 182.7 E(): 0.0085%3B 34.0%25 identity in 147 aa overlap;gbkey=CDS;gene=SCM11.23c;product=hypothetical protein;protein_id=NP_625265.1;transl_table=11
NC_003888.3	RefSeq	gene	1021386	1022009	.	-	.	ID=gene955;Dbxref=GeneID:1096392;Name=SCM11.24c;gbkey=Gene;gene=SCM11.24c;gene_biotype=protein_coding;gene_synonym=SCM11.24c;locus_tag=SCO0969
NC_003888.3	RefSeq	CDS	1021386	1022009	.	-	0	ID=cds934;Parent=gene955;Dbxref=Genbank:NP_625266.1,GeneID:1096392;Name=NP_625266.1;Note=SCM11.24c%2C possible reductase%2C len: 207 aa%3B similar to SW:F4RE_METJA (EMBL:U67591) Methanococcus jannaschii F420-dependent NADP reductase (EC 1.-.-.-) MJ1501%2C 223 aa%3B fasta scores: opt: 169 z-score: 190.2 E(): 0.0032%3B 27.0%25 identity in 200 aa overlap and to SCM11.23c%2C 207 aa%3B fasta scores: opt: 761 z-score: 742.1 E(): 0%3B 60.3%25 identity in 204 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCM11.24c;product=reductase;protein_id=NP_625266.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1021752	1021775	.	-	.	ID=id1097;Dbxref=GeneID:1096392;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCM11.24c
NC_003888.3	RefSeq	ribosome_entry_site	1022018	1022023	.	-	.	ID=id1098;gbkey=RBS
NC_003888.3	RefSeq	gene	1022079	1022813	.	-	.	ID=gene956;Dbxref=GeneID:1096393;Name=SCM11.25c;gbkey=Gene;gene=SCM11.25c;gene_biotype=protein_coding;gene_synonym=SCM11.25c;locus_tag=SCO0970
NC_003888.3	RefSeq	CDS	1022079	1022813	.	-	0	ID=cds935;Parent=gene956;Dbxref=Genbank:NP_625267.1,GeneID:1096393;Name=NP_625267.1;Note=SCM11.25c%2C probable dehydrogenase/reductase ( hypothetical protein)%2C len: 244 aa%3B similar to TR:CAB52925 (EMBL:AL109949) Streptomyces coelicolor oxidoreductase SCJ11.40%2C 250 aa%3B fasta scores: opt: 526 z-score: 621.9 E(): 2.9e-27%3B 42.1%25 identity in 242 aa overlap and to SW:DHG3_BACME (EMBL:D10625) Bacillus megaterium glucose 1-dehydrogenase III (EC 1.1.1.47) GdhIII%2C 261 aa%3B fasta scores: opt: 430 z-score: 509.8 E(): 5.1e-21%3B 36.4%25 identity in 247 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCM11.25c;product=dehydrogenase/reductase;protein_id=NP_625267.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1022103	1022195	.	-	.	ID=id1099;Dbxref=GeneID:1096393;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 48.20%2C E-value 1.8e-10;gbkey=misc_feature;gene=SCM11.25c
NC_003888.3	RefSeq	sequence_feature	1022256	1022795	.	-	.	ID=id1100;Dbxref=GeneID:1096393;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 156.80%2C E-value 3.7e-43;gbkey=misc_feature;gene=SCM11.25c
NC_003888.3	RefSeq	ribosome_entry_site	1022819	1022823	.	-	.	ID=id1101;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	1022828	1022833	.	+	.	ID=id1102;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	1022828	1022833	.	-	.	ID=id1103;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	1023044	1023048	.	+	.	ID=id1104;gbkey=RBS
NC_003888.3	RefSeq	gene	1023053	1023964	.	+	.	ID=gene957;Dbxref=GeneID:1096394;Name=SCM11.26;gbkey=Gene;gene=SCM11.26;gene_biotype=protein_coding;gene_synonym=SCM11.26;locus_tag=SCO0971
NC_003888.3	RefSeq	CDS	1023053	1023964	.	+	0	ID=cds936;Parent=gene957;Dbxref=Genbank:NP_625268.1,GeneID:1096394;Name=NP_625268.1;Note=SCM11.26%2C probable lysR-family trancsriptional regulator%2C len: 303 aa%3B similar to TR:Q9X9U9 (EMBL:Y18817) Streptomyces coelicolor transcriptional regulator of lysR family%2C 307 aa%3B fasta scores: opt: 502 z-score: 591.8 E(): 1.4e-25%3B 41.9%25 identity in 284 aa overlap and to SW:TFDT_ALCEU (EMBL:U16782) Alcaligenes eutrophus transcriptional regulatory protein TfdT%2C 228 aa%3B fasta scores: opt: 408 z-score: 484.4 E(): 1.3e-19%3B 42.6%25 identity in 204 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Contains a possible helix-turn-helix motif at residues 18..39 (+4.71 SD);gbkey=CDS;gene=SCM11.26;product=LysR family transcriptional regulator;protein_id=NP_625268.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1023065	1023481	.	+	.	ID=id1105;Dbxref=GeneID:1096394;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 138.50%2C E-value 1.2e-37;gbkey=misc_feature;gene=SCM11.26
NC_003888.3	RefSeq	sequence_feature	1023107	1023199	.	+	.	ID=id1106;Dbxref=GeneID:1096394;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCM11.26
NC_003888.3	RefSeq	gene	1024039	1024383	.	+	.	ID=gene958;Dbxref=GeneID:1096395;Name=SCM11.27;gbkey=Gene;gene=SCM11.27;gene_biotype=protein_coding;gene_synonym=SCM11.27;locus_tag=SCO0972
NC_003888.3	RefSeq	CDS	1024039	1024383	.	+	0	ID=cds937;Parent=gene958;Dbxref=Genbank:NP_625269.1,GeneID:1096395;Name=NP_625269.1;Note=SCM11.27%2C probable transposase remnant%2C len: 114 aa%3B similar to TR:CAB52928 (EMBL:AL109949) Streptomyces coelicolor  transposase (fragment) SCJ11.43c%2C 86 aa%3B fasta scores: opt: 292 z-score: 351.4 E(): 3.4e-12%3B 74.1%25 identity in 58 aa overlap and to SW:YI21_BURCE (EMBL:M64065) Burkholderia cepacia (Pseudomonas cepacia) insertion element IS402 hypothetical 24 kD protein%2C 211 aa%3B fasta scores: opt: 227 z-score: 271.9 E(): 9.1e-08%3B 59.6%25 identity in 57 aa overlap;gbkey=CDS;gene=SCM11.27;product=transposase remnant;protein_id=NP_625269.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1024497	1024501	.	+	.	ID=id1107;gbkey=RBS
NC_003888.3	RefSeq	gene	1024508	1025767	.	+	.	ID=gene959;Dbxref=GeneID:1096396;Name=SCM11.28;gbkey=Gene;gene=SCM11.28;gene_biotype=protein_coding;gene_synonym=SCM11.28;locus_tag=SCO0973
NC_003888.3	RefSeq	CDS	1024508	1025767	.	+	0	ID=cds938;Parent=gene959;Dbxref=Genbank:NP_625270.1,GeneID:1096396;Name=NP_625270.1;Note=SCM11.28%2C probable integral membrane protein%2C len: 419 aa%3B similar to various integral membran proteins%2C e.g. TR:Q9XAN8 (EMBL:AL079355) Streptomyces coelicolor integral membrane protein SC4C6.02c%2C 317 aa%3B fasta scores: opt: 674 z-score: 607.8 E(): 1.8e-26%3B 43.6%25 identity in 326 aa overlap;gbkey=CDS;gene=SCM11.28;product=hypothetical protein;protein_id=NP_625270.1;transl_table=11
NC_003888.3	RefSeq	gene	1025757	1027076	.	-	.	ID=gene960;Dbxref=GeneID:1096397;Name=SCBAC19F3.01c;gbkey=Gene;gene=SCBAC19F3.01c;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.01c,SCM11.29c;locus_tag=SCO0974
NC_003888.3	RefSeq	CDS	1025757	1027076	.	-	0	ID=cds939;Parent=gene960;Dbxref=Genbank:NP_733519.1,GeneID:1096397;Name=NP_733519.1;Note=SCBAC19F3.01c%2C possible hypothetical protein%2C len: >237aa: interesting similarity to TR:O86308 (EMBL:Z96935) a resuscitation-promoting factor from Micrococcus luteus (220 aa) fasta scores%3B opt: 499%2C Z-score: 540.6%2C 41.784%25 identity (45.408%25 ungapped) in 213 aa overlap. Similar to many others eg. TR:Q9F2Q2 (EMBL:AL442120) hypothetical protein from Streptomyces coelicolor (244 aa) fasta scores%3B opt: 461%2C Z-score: 499.7%2C 44.033%25 identity (51.442%25 ungapped) in 243 aa overlap. Contains Pfam match to entry PF01476 LysM%2C LysM domain and has a possible N-terminal signal sequence.~SCM11.29c%2C probable hypothetical protein (partial CDS)%2C len: >234 aa%3B similar to TR:Q9X7W8 (EMBL:AL049485) Streptomyces coelicolor   peptidase SC6A5%2C 312 aa%3B fast ascores: opt: 684 z-score: 619.7 E(): 3.9e-27%3B 55.2%25 identity in 183 aa overlap and to SW:ALE1_STACP (EMBL:D86328) Staphylococcus capitis glycyl-glycine endopeptidase Ale-1 precursor (EC 3.4.24.75)%2C 362 aa%3B fasta scores: opt: 313 z-score: 291.5 E(): 7.4e-09%3B 29.3%25 identity in 229 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCBAC19F3.01c;product=hypothetical protein;protein_id=NP_733519.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1026388	1026411	.	-	.	ID=id1108;Dbxref=GeneID:1096397;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC19F3.01c
NC_003888.3	RefSeq	sequence_feature	1026432	1026578	.	-	.	ID=id1109;Dbxref=GeneID:1096397;Note=Pfam match to entry PF01476 LysM%2C LysM domain%2C score 28.10%2C E-value 0.0002;gbkey=misc_feature;gene=SCBAC19F3.01c
NC_003888.3	RefSeq	ribosome_entry_site	1027380	1027384	.	+	.	ID=id1110;gbkey=RBS
NC_003888.3	RefSeq	gene	1027393	1028832	.	+	.	ID=gene961;Dbxref=GeneID:1096398;Name=SCBAC19F3.02;gbkey=Gene;gene=SCBAC19F3.02;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.02,zwf3;locus_tag=SCO0975
NC_003888.3	RefSeq	CDS	1027393	1028832	.	+	0	ID=cds940;Parent=gene961;Dbxref=Genbank:NP_625271.1,GeneID:1096398;Name=NP_625271.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;gene=SCBAC19F3.02;product=6-phosphogluconate dehydrogenase;protein_id=NP_625271.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1027429	1028769	.	+	.	ID=id1111;Dbxref=GeneID:1096398;Note=Pfam match to entry PF00393 6PGD%2C 6-phosphogluconate dehydrogenase%2C score 787.70%2C E-value 4.5e-233;gbkey=misc_feature;gene=SCBAC19F3.02
NC_003888.3	RefSeq	gene	1028822	1029955	.	-	.	ID=gene962;Dbxref=GeneID:1096399;Name=SCBAC19F3.03c;gbkey=Gene;gene=SCBAC19F3.03c;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.03c;locus_tag=SCO0976
NC_003888.3	RefSeq	CDS	1028822	1029955	.	-	0	ID=cds941;Parent=gene962;Dbxref=Genbank:NP_625272.1,GeneID:1096399;Name=NP_625272.1;Note=SCBAC19F3.03c%2C unknown%2C len: 377 aa: no significant database matches. Alanine-rich C-terminal region.;gbkey=CDS;gene=SCBAC19F3.03c;product=hypothetical protein;protein_id=NP_625272.1;transl_table=11
NC_003888.3	RefSeq	gene	1029991	1030341	.	-	.	ID=gene963;Dbxref=GeneID:1096400;Name=SCBAC19F3.04c;gbkey=Gene;gene=SCBAC19F3.04c;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.04c;locus_tag=SCO0977
NC_003888.3	RefSeq	CDS	1029991	1030341	.	-	0	ID=cds942;Parent=gene963;Dbxref=Genbank:NP_625273.1,GeneID:1096400;Name=NP_625273.1;Note=SCBAC19F3.04c%2C conserved hypothetical protein%2C len: 116aa: similar to many eg. TR:Q9RTC1 (EMBL:AE002024) conserved hypothetical protein from Deinococcus radiodurans (93 aa) fasta scores%3B opt: 176%2C Z-score: 229.5%2C 34.091%25 identity (35.294%25 ungapped) in 88 aa overlap and TR:Q9AJZ8 (EMBL:AL512944) conserved hypothetical protein SC8D11.21 from Streptomyces coelicolor (112 aa) fasta scores%3B opt: 169%2C Z-score: 220.0%2C 34.862%25 identity (38.776%25 ungapped) in 109 aa overlap.;gbkey=CDS;gene=SCBAC19F3.04c;product=hypothetical protein;protein_id=NP_625273.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1030345	1030349	.	-	.	ID=id1112;gbkey=RBS
NC_003888.3	RefSeq	gene	1030387	1030806	.	-	.	ID=gene964;Dbxref=GeneID:1096401;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;gene_synonym=panD,SCBAC19F3.05c;locus_tag=SCO0978
NC_003888.3	RefSeq	CDS	1030387	1030806	.	-	0	ID=cds943;Parent=gene964;Dbxref=Genbank:NP_625274.1,GeneID:1096401;Name=NP_625274.1;Note=Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5);gbkey=CDS;gene=panD;product=aspartate alpha-decarboxylase;protein_id=NP_625274.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1030459	1030806	.	-	.	ID=id1113;Dbxref=GeneID:1096401;Note=Pfam match to entry PF02261 Asp_decarbox%2C Aspartate decarboxylase%2C score 259.90%2C E-value 3.3e-74;gbkey=misc_feature;gene=panD
NC_003888.3	RefSeq	ribosome_entry_site	1030813	1030818	.	-	.	ID=id1114;gbkey=RBS
NC_003888.3	RefSeq	gene	1031136	1031372	.	-	.	ID=gene965;Dbxref=GeneID:1096402;Name=SCBAC19F3.06c;gbkey=Gene;gene=SCBAC19F3.06c;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.06c;locus_tag=SCO0979
NC_003888.3	RefSeq	CDS	1031136	1031372	.	-	0	ID=cds944;Parent=gene965;Dbxref=Genbank:NP_625275.1,GeneID:1096402;Name=NP_625275.1;Note=SCBAC19F3.06c%2C doubtful CDS%2C len: 78aa: no significant database matches.;gbkey=CDS;gene=SCBAC19F3.06c;product=hypothetical protein;protein_id=NP_625275.1;transl_table=11
NC_003888.3	RefSeq	gene	1031600	1031956	.	+	.	ID=gene966;Dbxref=GeneID:1096403;Name=SCBAC19F3.07;gbkey=Gene;gene=SCBAC19F3.07;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.07;locus_tag=SCO0980
NC_003888.3	RefSeq	CDS	1031600	1031956	.	+	0	ID=cds945;Parent=gene966;Dbxref=Genbank:NP_625276.1,GeneID:1096403;Name=NP_625276.1;Note=SCBAC19F3.07%2C partial CDS%2C len: 119aa: similar to N-terminus of many eg. SW:P49851 (YKHA_BACSU) acyl-CoA thioester hydrolase from Bacillus subtilis (179 aa) fasta scores%3B opt: 240%2C Z-score: 251.9%2C 39.815%25 identity (40.187%25 ungapped) in 108 aa overlap.;end_range=1031956,.;gbkey=CDS;gene=SCBAC19F3.07;partial=true;product=acyl-CoA thioesterase;protein_id=NP_625276.1;transl_table=11
NC_003888.3	RefSeq	gene	1031976	1033445	.	-	.	ID=gene967;Dbxref=GeneID:1096404;Name=SCBAC19F3.08c;gbkey=Gene;gene=SCBAC19F3.08c;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.08c;locus_tag=SCO0981
NC_003888.3	RefSeq	CDS	1031976	1033445	.	-	0	ID=cds946;Parent=gene967;Dbxref=Genbank:NP_625277.1,GeneID:1096404;Name=NP_625277.1;Note=SCBAC19F3.08c%2C possible DNA-binding protein%2C len: 489aa: similar to many eg. TR:AAK44705 (EMBL:AE006950) DNA-binding protein MT0481 from Mycobacterium tuberculosis (474 aa) fasta scores%3B opt: 1753%2C Z-score: 1963.4%2C 56.780%25 identity (58.009%25 ungapped) in 472 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCBAC19F3.08c;product=DNA-binding protein;protein_id=NP_625277.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1032267	1032290	.	-	.	ID=id1115;Dbxref=GeneID:1096404;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC19F3.08c
NC_003888.3	RefSeq	sequence_feature	1033254	1033418	.	-	.	ID=id1116;Dbxref=GeneID:1096404;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 58.90%2C E-value 1.1e-13;gbkey=misc_feature;gene=SCBAC19F3.08c
NC_003888.3	RefSeq	ribosome_entry_site	1033453	1033458	.	-	.	ID=id1117;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1033810	1033815	.	+	.	ID=id1118;gbkey=RBS
NC_003888.3	RefSeq	gene	1033827	1035107	.	+	.	ID=gene968;Dbxref=GeneID:1096405;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;gene_synonym=aceA,SCBAC19F3.09;locus_tag=SCO0982
NC_003888.3	RefSeq	CDS	1033827	1035107	.	+	0	ID=cds947;Parent=gene968;Dbxref=Genbank:NP_625278.1,GeneID:1096405;Name=NP_625278.1;Note=Catalyzes the first step in the glyoxalate cycle%2C which converts lipids to carbohydrates;gbkey=CDS;gene=aceA;product=isocitrate lyase;protein_id=NP_625278.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1033851	1034576	.	+	.	ID=id1119;Dbxref=GeneID:1096405;Note=Pfam match to entry PF00463 ICL%2C Isocitrate lyase family%2C score 458.40%2C E-value 4.6e-180;gbkey=misc_feature;gene=aceA
NC_003888.3	RefSeq	sequence_feature	1034385	1034402	.	+	.	ID=id1120;Dbxref=GeneID:1096405;Note=PS00161 Isocitrate lyase signature;gbkey=misc_feature;gene=aceA
NC_003888.3	RefSeq	sequence_feature	1034577	1035101	.	+	.	ID=id1121;Dbxref=GeneID:1096405;Note=Pfam match to entry PF00463 ICL%2C Isocitrate lyase family%2C score 374.30%2C E-value 4.2e-147;gbkey=misc_feature;gene=aceA
NC_003888.3	RefSeq	ribosome_entry_site	1035197	1035202	.	+	.	ID=id1122;gbkey=RBS
NC_003888.3	RefSeq	gene	1035208	1036800	.	+	.	ID=gene969;Dbxref=GeneID:1096406;Name=aceB2;gbkey=Gene;gene=aceB2;gene_biotype=protein_coding;gene_synonym=aceB2,SCBAC19F3.10;locus_tag=SCO0983
NC_003888.3	RefSeq	CDS	1035208	1036800	.	+	0	ID=cds948;Parent=gene969;Dbxref=Genbank:NP_625279.1,GeneID:1096406;Name=NP_625279.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;gene=aceB2;product=malate synthase;protein_id=NP_625279.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1035229	1036776	.	+	.	ID=id1123;Dbxref=GeneID:1096406;Note=Pfam match to entry PF01274 Malate_synthase%2C Malate synthase%2C score 821.20%2C E-value 3.8e-243;gbkey=misc_feature;gene=aceB2
NC_003888.3	RefSeq	sequence_feature	1036003	1036050	.	+	.	ID=id1124;Dbxref=GeneID:1096406;Note=PS00510 Malate synthase signature;gbkey=misc_feature;gene=aceB2
NC_003888.3	RefSeq	gene	1036797	1037666	.	+	.	ID=gene970;Dbxref=GeneID:1096407;Name=SCBAC19F3.11;gbkey=Gene;gene=SCBAC19F3.11;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.11;locus_tag=SCO0984
NC_003888.3	RefSeq	CDS	1036797	1037666	.	+	0	ID=cds949;Parent=gene970;Dbxref=Genbank:NP_625280.1,GeneID:1096407;Name=NP_625280.1;Note=converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA;gbkey=CDS;gene=SCBAC19F3.11;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=NP_625280.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1036800	1037360	.	+	.	ID=id1125;Dbxref=GeneID:1096407;Note=Pfam match to entry PF02737 3HCDH_N%2C 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain%2C score 198.30%2C E-value 1.2e-55;gbkey=misc_feature;gene=SCBAC19F3.11
NC_003888.3	RefSeq	sequence_feature	1037316	1037339	.	+	.	ID=id1126;Dbxref=GeneID:1096407;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC19F3.11
NC_003888.3	RefSeq	sequence_feature	1037364	1037654	.	+	.	ID=id1127;Dbxref=GeneID:1096407;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain%2C score 119.50%2C E-value 6.5e-32;gbkey=misc_feature;gene=SCBAC19F3.11
NC_003888.3	RefSeq	ribosome_entry_site	1038231	1038236	.	+	.	ID=id1128;gbkey=RBS
NC_003888.3	RefSeq	gene	1038243	1040561	.	+	.	ID=gene971;Dbxref=GeneID:1096408;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;gene_synonym=metE,SCBAC19F3.12;locus_tag=SCO0985
NC_003888.3	RefSeq	CDS	1038243	1040561	.	+	0	ID=cds950;Parent=gene971;Dbxref=Genbank:NP_625281.1,GeneID:1096408;Name=NP_625281.1;Note=catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine;gbkey=CDS;gene=metE;product=5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase;protein_id=NP_625281.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1039563	1040534	.	+	.	ID=id1129;Dbxref=GeneID:1096408;Note=Pfam match to entry PF01717 Methionine_synt%2C Methionine synthase%2C vitamin-B12 independent%2C score 668.20%2C E-value 4.1e-197;gbkey=misc_feature;gene=metE
NC_003888.3	RefSeq	ribosome_entry_site	1040754	1040758	.	+	.	ID=id1130;gbkey=RBS
NC_003888.3	RefSeq	gene	1040764	1041465	.	+	.	ID=gene972;Dbxref=GeneID:1096409;Name=SCBAC19F3.13;gbkey=Gene;gene=SCBAC19F3.13;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.13;locus_tag=SCO0986
NC_003888.3	RefSeq	CDS	1040764	1041465	.	+	0	ID=cds951;Parent=gene972;Dbxref=Genbank:NP_625282.1,GeneID:1096409;Name=NP_625282.1;Note=SCBAC19F3.13%2C possible integral membrane protein%2C len: 233aa: similar to others from Streptomyces coelicolor eg. TR:Q9RCU4 (EMBL:AL136149) integral membrane protein (234 aa) fasta scores%3B opt: 315%2C Z-score: 347.2%2C 34.632%25 identity (37.559%25 ungapped) in 231 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCBAC19F3.13;product=hypothetical protein;protein_id=NP_625282.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1041674	1041680	.	+	.	ID=id1131;gbkey=RBS
NC_003888.3	RefSeq	gene	1041692	1043245	.	+	.	ID=gene973;Dbxref=GeneID:1096410;Name=SCBAC19F3.14;gbkey=Gene;gene=SCBAC19F3.14;gene_biotype=protein_coding;gene_synonym=SCBAC19F3.14;locus_tag=SCO0987
NC_003888.3	RefSeq	CDS	1041692	1043245	.	+	0	ID=cds952;Parent=gene973;Dbxref=Genbank:NP_625283.1,GeneID:1096410;Name=NP_625283.1;Note=SCBAC19F3.14%2C possible integral membrane protein%2C len: 517aa: similar to many eg. TR:Q9RCU8 (EMBL:AL136149) integral membrane protein from Streptomyces coelicolor (485 aa) fasta scores%3B opt: 581%2C Z-score: 572.1%2C 46.076%25 identity (48.211%25 ungapped) in 497 aa overlap. Contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=SCBAC19F3.14;product=hypothetical protein;protein_id=NP_625283.1;transl_table=11
NC_003888.3	RefSeq	gene	1043277	1043969	.	+	.	ID=gene974;Dbxref=GeneID:1096411;Name=2SCG2.01;gbkey=Gene;gene=2SCG2.01;gene_biotype=protein_coding;gene_synonym=2SCG2.01;locus_tag=SCO0988
NC_003888.3	RefSeq	CDS	1043277	1043969	.	+	0	ID=cds953;Parent=gene974;Dbxref=Genbank:NP_625284.1,GeneID:1096411;Name=NP_625284.1;Note=2SCG2.01%2C possible acetyltransferase%2C len: 230 aa. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=2SCG2.01;product=acetyltransferase;protein_id=NP_625284.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1043583	1043876	.	+	.	ID=id1132;Dbxref=GeneID:1096411;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 38.50%2C E-value 1.5e-07;gbkey=misc_feature;gene=2SCG2.01
NC_003888.3	RefSeq	gene	1043990	1044394	.	-	.	ID=gene975;Dbxref=GeneID:1096412;Name=2SCG2.02c;gbkey=Gene;gene=2SCG2.02c;gene_biotype=protein_coding;gene_synonym=2SCG2.02c;locus_tag=SCO0989
NC_003888.3	RefSeq	CDS	1043990	1044394	.	-	0	ID=cds954;Parent=gene975;Dbxref=Genbank:NP_625285.1,GeneID:1096412;Name=NP_625285.1;Note=2SCG2.02c%2C unknown%2C len: 134 aa;gbkey=CDS;gene=2SCG2.02c;product=hypothetical protein;protein_id=NP_625285.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1044406	1044409	.	-	.	ID=id1133;gbkey=RBS
NC_003888.3	RefSeq	gene	1044679	1045668	.	-	.	ID=gene976;Dbxref=GeneID:1096413;Name=2SCG2.03c;gbkey=Gene;gene=2SCG2.03c;gene_biotype=protein_coding;gene_synonym=2SCG2.03c;locus_tag=SCO0990
NC_003888.3	RefSeq	CDS	1044679	1045668	.	-	0	ID=cds955;Parent=gene976;Dbxref=Genbank:NP_625286.1,GeneID:1096413;Name=NP_625286.1;Note=2SCG2.03c%2C possible integral membrane protein%2C len: 329 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG2.03c;product=hypothetical protein;protein_id=NP_625286.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1046241	1046246	.	+	.	ID=id1134;gbkey=RBS
NC_003888.3	RefSeq	gene	1046251	1047114	.	+	.	ID=gene977;Dbxref=GeneID:1096414;Name=2SCG2.04;gbkey=Gene;gene=2SCG2.04;gene_biotype=protein_coding;gene_synonym=2SCG2.04;locus_tag=SCO0991
NC_003888.3	RefSeq	CDS	1046251	1047114	.	+	0	ID=cds956;Parent=gene977;Dbxref=Genbank:NP_625287.1,GeneID:1096414;Name=NP_625287.1;Note=2SCG2.04%2C conserved hypothetical protein%2C len: 287 aa%3B similar to TR:Q9XDM4 (EMBL:AF026270) Salmonella enterica serovar Typhimurium hypothetical protein PduX%2C 300 aa%3B fasta scores: opt: 217 z-score: 267.6 E(): 2.2e-07%3B 27.1%25 identity in 266 aa overlap;gbkey=CDS;gene=2SCG2.04;product=hypothetical protein;protein_id=NP_625287.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1047098	1047104	.	+	.	ID=id1135;Dbxref=GeneID:1096414;gbkey=RBS;gene=2SCG2.04
NC_003888.3	RefSeq	gene	1047111	1048133	.	+	.	ID=gene978;Dbxref=GeneID:1096415;Name=2SCG2.05;gbkey=Gene;gene=2SCG2.05;gene_biotype=protein_coding;gene_synonym=2SCG2.05;locus_tag=SCO0992
NC_003888.3	RefSeq	CDS	1047111	1048133	.	+	0	ID=cds957;Parent=gene978;Dbxref=Genbank:NP_625288.1,GeneID:1096415;Name=NP_625288.1;Note=2SCG2.05%2C possible cysteine synthase%2C len: 340 aa%3B similar to SW:CYSM_ALCEU (EMBL:X97499) Alcaligenes eutrophus cysteine synthase (EC 4.2.99.8) CysM%2C 339 aa%3B fasta scores: opt: 283 z-score: 331.0 E(): 6.5e-11%3B 30.3%25 identity in 277 aa overlap. Contains Pfam match to entry PF00291 PALP%2C Pyridoxal-phosphate dependent enzyme. Also contains TTA leucine codon (115)%2C possible target for bldA regulation;gbkey=CDS;gene=2SCG2.05;product=cysteine synthase;protein_id=NP_625288.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1047126	1047965	.	+	.	ID=id1136;Dbxref=GeneID:1096415;Note=Pfam match to entry PF00291 PALP%2C Pyridoxal-phosphate dependent enzyme%2C score 70.40%2C E-value 3.7e-17;gbkey=misc_feature;gene=2SCG2.05
NC_003888.3	RefSeq	sequence_feature	1047453	1047455	.	+	.	ID=id1137;Dbxref=GeneID:1096415;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SCG2.05
NC_003888.3	RefSeq	gene	1048130	1049368	.	+	.	ID=gene979;Dbxref=GeneID:1096416;Name=2SCG2.06;gbkey=Gene;gene=2SCG2.06;gene_biotype=protein_coding;gene_synonym=2SCG2.06;locus_tag=SCO0993
NC_003888.3	RefSeq	CDS	1048130	1049368	.	+	0	ID=cds958;Parent=gene979;Dbxref=Genbank:NP_625289.1,GeneID:1096416;Name=NP_625289.1;Note=2SCG2.06%2C conserved hypothetical protein%2C len: 412 aa%3B similar to SW:Y4RH_RHISN (EMBL:AE000094) Rhizobium sp. hypothetical 52.5 kDa protein Y4rH%2C 478 aa%3B fasta scores: opt: 348 z-score: 384.2 E(): 7.1e-14%3B 26.3%25 identity in 400 aa overlap;gbkey=CDS;gene=2SCG2.06;product=hypothetical protein;protein_id=NP_625289.1;transl_table=11
NC_003888.3	RefSeq	gene	1049361	1050626	.	+	.	ID=gene980;Dbxref=GeneID:1096417;Name=2SCG2.07;gbkey=Gene;gene=2SCG2.07;gene_biotype=protein_coding;gene_synonym=2SCG2.07;locus_tag=SCO0994
NC_003888.3	RefSeq	CDS	1049361	1050626	.	+	0	ID=cds959;Parent=gene980;Dbxref=Genbank:NP_625290.1,GeneID:1096417;Name=NP_625290.1;Note=2SCG2.07%2C possible integral membrane protein%2C len: 421 aa%3B similar to TR:O86692 (EMBL:AL031371) Streptomyces coelicolor  transport system permease SC4G2.20%2C 436 aa%3B fasta scores: opt: 354 z-score: 396.0 E(): 1.6e-14%3B 29.6%25 identity in 429 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG2.07;product=hypothetical protein;protein_id=NP_625290.1;transl_table=11
NC_003888.3	RefSeq	gene	1050595	1051344	.	+	.	ID=gene981;Dbxref=GeneID:1096418;Name=2SCG2.08;gbkey=Gene;gene=2SCG2.08;gene_biotype=protein_coding;gene_synonym=2SCG2.08;locus_tag=SCO0995
NC_003888.3	RefSeq	CDS	1050595	1051344	.	+	0	ID=cds960;Parent=gene981;Dbxref=Genbank:NP_625291.1,GeneID:1096418;Name=NP_625291.1;Note=2SCG2.08%2C possible methyltransferase%2C len: 249 aa%3B similar to TR:P72459 (EMBL:Y08763) Streptomyces griseus methyltransferase StsG%2C 253 aa%3B fasta scores: opt: 337 z-score: 418.3 E(): 8.9e-16%3B 28.9%25 identity in 242 aa overlap. Contains Pfam match to entry PF01209 Ubie_methyltran%2C ubiE/COQ5 methyltransferase family;gbkey=CDS;gene=2SCG2.08;product=methyltransferase;protein_id=NP_625291.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1050664	1051284	.	+	.	ID=id1138;Dbxref=GeneID:1096418;Note=Pfam match to entry PF01209 Ubie_methyltran%2C ubiE/COQ5 methyltransferase family%2C score -116.70%2C E-value 0.0019;gbkey=misc_feature;gene=2SCG2.08
NC_003888.3	RefSeq	ribosome_entry_site	1051599	1051606	.	+	.	ID=id1139;gbkey=RBS
NC_003888.3	RefSeq	gene	1051613	1052656	.	+	.	ID=gene982;Dbxref=GeneID:1096419;Name=2SCG2.09;gbkey=Gene;gene=2SCG2.09;gene_biotype=protein_coding;gene_synonym=2SCG2.09;locus_tag=SCO0996
NC_003888.3	RefSeq	CDS	1051613	1052656	.	+	0	ID=cds961;Parent=gene982;Dbxref=Genbank:NP_625292.1,GeneID:1096419;Name=NP_625292.1;Note=2SCG2.09%2C possible lipoprotein%2C len: 347 aa%3B similar to TR:Q9K467 (EMBL:AL359215) Streptomyces coelicolor iron transport lipoprotein SC2H12.17%2C 345 aa%3B fasta scores: opt: 473 z-score: 540.7 E(): 1.4e-22%3B 39.2%25 identity in 339 aa overlap. Contains Pfam match to entry PF01497 Peripla_BP_2%2C Periplasmic binding protein%2C correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG2.09;product=lipoprotein;protein_id=NP_625292.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1051694	1051726	.	+	.	ID=id1140;Dbxref=GeneID:1096419;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCG2.09
NC_003888.3	RefSeq	sequence_feature	1051835	1052581	.	+	.	ID=id1141;Dbxref=GeneID:1096419;Note=Pfam match to entry PF01497 Peripla_BP_2%2C Periplasmic binding protein%2C score 68.30%2C E-value 1.7e-16;gbkey=misc_feature;gene=2SCG2.09
NC_003888.3	RefSeq	sequence_feature	1052565	1057347	.	-	.	ID=id1142;Note=previously sequenced DNA fragment. EMBL:AF099015 Streptomyces coelicolor strain A3(2) integrase (int)%2C Fe-containing superoxide dismutase II (sodF2)%2C Fe uptake system permease (ftrE)%2C and Fe uptake system integral membrane protein (ftrD) genes%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1052653	1053768	.	+	.	ID=gene983;Dbxref=GeneID:1096420;Name=2SCG2.10;gbkey=Gene;gene=2SCG2.10;gene_biotype=protein_coding;gene_synonym=2SCG2.10,ftrD;locus_tag=SCO0997
NC_003888.3	RefSeq	CDS	1052653	1053768	.	+	0	ID=cds962;Parent=gene983;Dbxref=Genbank:NP_625293.1,GeneID:1096420;Name=NP_625293.1;Note=2SCG2.10%2C ftrD%2C Fe uptake system integral membrane protein%2C len: 371 aa%3B previously sequenced and annotated as TR:Q9X471 (EMBL:AF099015) Streptomyces coelicolor Fe uptake system integral membrane protein FtrD%2C 374 aa and similar to TR:CAB94639 (EMBL:AL359215) Streptomyces coelicolor FecCD-family membrane transport protein SC2H12.15%2C 368 aa%3B fasta scores: opt: 942 z-score: 839.0 E(): 0%3B 45.8%25 identity in 360 aa overlap. Contains Pfam match to entry PF01032 FecCD_family%2C FecCD transport family. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG2.10;product=Fe uptake system integral membrane protein;protein_id=NP_625293.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1052803	1053732	.	+	.	ID=id1143;Dbxref=GeneID:1096420;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 340.80%2C E-value 1.5e-98;gbkey=misc_feature;gene=2SCG2.10
NC_003888.3	RefSeq	ribosome_entry_site	1053756	1053761	.	+	.	ID=id1144;Dbxref=GeneID:1096420;gbkey=RBS;gene=2SCG2.10
NC_003888.3	RefSeq	gene	1053765	1054583	.	+	.	ID=gene984;Dbxref=GeneID:1096421;Name=2SCG2.11;gbkey=Gene;gene=2SCG2.11;gene_biotype=protein_coding;gene_synonym=2SCG2.11,ftrE;locus_tag=SCO0998
NC_003888.3	RefSeq	CDS	1053765	1054583	.	+	0	ID=cds963;Parent=gene984;Dbxref=Genbank:NP_625294.1,GeneID:1096421;Name=NP_625294.1;Note=2SCG2.11%2C ftrE%2C Fe uptake system permease%2C len: 272 aa%3B similar to previously sequenced and annotated as TR:Q9X470 (EMBL:AF099015) Streptomyces coelicolor Fe uptake system permease FtrE%2C 271 aa%3B fasta scores:opt: 1424 z-score: 1545.2 E(): 0%3B 89.5%25 identity in 257 aa overlap and similar to TR:CAB94640 (EMBL:AL359215) Streptomyces coelicolor iron transport protein%2C ATP-binding component SC2H12.16%2C 258 aa%3B fasta scores: opt: 834 z-score: 672.9 E(): 7.8e-32%3B 55.4%25 identity in 251 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=2SCG2.11;product=Fe uptake system permease;protein_id=NP_625294.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1053855	1054406	.	+	.	ID=id1145;Dbxref=GeneID:1096421;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 205.30%2C E-value 9.2e-58;gbkey=misc_feature;gene=2SCG2.11
NC_003888.3	RefSeq	sequence_feature	1053876	1053899	.	+	.	ID=id1146;Dbxref=GeneID:1096421;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCG2.11
NC_003888.3	RefSeq	sequence_feature	1054188	1054232	.	+	.	ID=id1147;Dbxref=GeneID:1096421;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SCG2.11
NC_003888.3	RefSeq	gene	1054754	1055401	.	-	.	ID=gene985;Dbxref=GeneID:1096422;Name=2SCG2.12c;gbkey=Gene;gene=2SCG2.12c;gene_biotype=protein_coding;gene_synonym=2SCG2.12c,sodF2;locus_tag=SCO0999
NC_003888.3	RefSeq	CDS	1054754	1055401	.	-	0	ID=cds964;Parent=gene985;Dbxref=Genbank:NP_625295.1,GeneID:1096422;Name=NP_625295.1;Note=2SCG2.12c%2C sodF2%2C superoxide dismutase%2C len: 215 aa%3B previously sequenced as TR:Q9X469 (EMBL:AF099015) Streptomyces coelicolor superoxide dismutase (EC 1.15.1.1) SodF2%2C 215 aa and similar to SW:SODF_STRCO (EMBL:AF012087) Streptomyces coelicolor superoxide dismutase SodF%2C (SC8E4A.03) 213 aa%3B fasta scores: opt: 1315 z-score: 1473.9 E(): 0%3B 89.3%25 identity in 215 aa overlap. Contains Pfam match to entry PF00081 sodfe%2C Iron/manganese superoxide dismutases (SODM) and match to Prosite entry PS00088 Manganese and iron superoxide dismutases signature;gbkey=CDS;gene=2SCG2.12c;product=superoxide dismutase;protein_id=NP_625295.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1054784	1055395	.	-	.	ID=id1148;Dbxref=GeneID:1096422;Note=Pfam match to entry PF00081 sodfe%2C Iron/manganese superoxide dismutases (SODM)%2C score 344.50%2C E-value 1.1e-99;gbkey=misc_feature;gene=2SCG2.12c
NC_003888.3	RefSeq	sequence_feature	1054880	1054903	.	-	.	ID=id1149;Dbxref=GeneID:1096422;Note=PS00088 Manganese and iron superoxide dismutases signature;gbkey=misc_feature;gene=2SCG2.12c
NC_003888.3	RefSeq	ribosome_entry_site	1055411	1055415	.	-	.	ID=id1150;gbkey=RBS
NC_003888.3	RefSeq	gene	1055883	1056995	.	-	.	ID=gene986;Dbxref=GeneID:1096423;Name=2SCG2.13c;gbkey=Gene;gene=2SCG2.13c;gene_biotype=protein_coding;gene_synonym=2SCG2.13c;locus_tag=SCO1000
NC_003888.3	RefSeq	CDS	1055883	1056995	.	-	0	ID=cds965;Parent=gene986;Dbxref=Genbank:NP_625296.1,GeneID:1096423;Name=NP_625296.1;Note=2SCG2.13c%2C integrase%2C len: 370 aa%3B N-terminal previously sequenced and annotated as TR:Q9X468 (EMBL:AF099015) Streptomyces coelicolor integrase Int%2C 222 aa. Contains Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family;gbkey=CDS;gene=2SCG2.13c;product=integrase;protein_id=NP_625296.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1055925	1056500	.	-	.	ID=id1151;Dbxref=GeneID:1096423;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 46.70%2C E-value 5.1e-10;gbkey=misc_feature;gene=2SCG2.13c
NC_003888.3	RefSeq	gene	1057387	1057749	.	+	.	ID=gene987;Dbxref=GeneID:1096424;Name=2SCG2.14;gbkey=Gene;gene=2SCG2.14;gene_biotype=protein_coding;gene_synonym=2SCG2.14;locus_tag=SCO1001
NC_003888.3	RefSeq	CDS	1057387	1057749	.	+	0	ID=cds966;Parent=gene987;Dbxref=Genbank:NP_625297.1,GeneID:1096424;Name=NP_625297.1;Note=2SCG2.14%2C unknown%2C len: 120 aa;gbkey=CDS;gene=2SCG2.14;product=hypothetical protein;protein_id=NP_625297.1;transl_table=11
NC_003888.3	RefSeq	gene	1057892	1058278	.	-	.	ID=gene988;Dbxref=GeneID:1096425;Name=2SCG2.15c;gbkey=Gene;gene=2SCG2.15c;gene_biotype=protein_coding;gene_synonym=2SCG2.15c;locus_tag=SCO1002
NC_003888.3	RefSeq	CDS	1057892	1058278	.	-	0	ID=cds967;Parent=gene988;Dbxref=Genbank:NP_625298.1,GeneID:1096425;Name=NP_625298.1;Note=2SCG2.15c%2C unknown%2C len: 128 aa;gbkey=CDS;gene=2SCG2.15c;product=hypothetical protein;protein_id=NP_625298.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1058371	1058375	.	+	.	ID=id1152;gbkey=RBS
NC_003888.3	RefSeq	gene	1058377	1058961	.	+	.	ID=gene989;Dbxref=GeneID:1096426;Name=2SCG2.16;gbkey=Gene;gene=2SCG2.16;gene_biotype=protein_coding;gene_synonym=2SCG2.16;locus_tag=SCO1003
NC_003888.3	RefSeq	CDS	1058377	1058961	.	+	0	ID=cds968;Parent=gene989;Dbxref=Genbank:NP_625299.1,GeneID:1096426;Name=NP_625299.1;Note=2SCG2.16%2C probable tetR-family transcriptional regulator%2C len: 194 aa%3B similar to TR:Q9RL21 (EMBL:AL117385) Streptomyces coelicolor transcriptional regulator SC5G9.05%2C 193 aa%3B fasta scores: opt: 408 z-score: 498.8 E(): 2.9e-20%3B 39.4%25 identity in 193 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Also contains possible helix-turn-helix motif at residues 37..58 (+4.68 SD);gbkey=CDS;gene=2SCG2.16;product=TetR family transcriptional regulator;protein_id=NP_625299.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1058446	1058577	.	+	.	ID=id1153;Dbxref=GeneID:1096426;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 37.30%2C E-value 5.5e-08;gbkey=misc_feature;gene=2SCG2.16
NC_003888.3	RefSeq	gene	1059073	1059873	.	-	.	ID=gene990;Dbxref=GeneID:1096427;Name=2SCG2.17c;gbkey=Gene;gene=2SCG2.17c;gene_biotype=protein_coding;gene_synonym=2SCG2.17c;locus_tag=SCO1004
NC_003888.3	RefSeq	CDS	1059073	1059873	.	-	0	ID=cds969;Parent=gene990;Dbxref=Genbank:NP_625300.1,GeneID:1096427;Name=NP_625300.1;Note=2SCG2.17c%2C unknown%2C len: 266 aa%3B similar to part of TR:CAC01640 (EMBL:AL391072) Streptomyces coelicolor conserved hypothetical protein SC9A4.13%2C 267 aa%3B fasta scores opt: 191 z-score: 213.7 E(): 0.00022%3B 52.5%25 identity in 59 aa overlap. Contains a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=2SCG2.17c;product=hypothetical protein;protein_id=NP_625300.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1059496	1059753	.	-	.	ID=id1154;Dbxref=GeneID:1096427;Note=High concentration in alanine%2C leucine%2C proline and serine amino acid residues;gbkey=misc_feature;gene=2SCG2.17c
NC_003888.3	RefSeq	sequence_feature	1059559	1059561	.	-	.	ID=id1155;Dbxref=GeneID:1096427;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SCG2.17c
NC_003888.3	RefSeq	sequence_feature	1059918	1061468	.	+	.	ID=id1156;Note=previously sequenced DNA fragment. EMBL:Y00434 Streptomyces coelicolor insertion sequence IS110;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1060181	1061398	.	+	.	ID=gene991;Dbxref=GeneID:1096428;Name=2SCG2.18;gbkey=Gene;gene=2SCG2.18;gene_biotype=protein_coding;gene_synonym=2SCG2.18,IS110-B;locus_tag=SCO1005
NC_003888.3	RefSeq	CDS	1060181	1061398	.	+	0	ID=cds970;Parent=gene991;Dbxref=Genbank:NP_625301.1,GeneID:1096428;Name=NP_625301.1;Note=2SCG2.18%2C IS110-B%2C insertion element%2C len: 405 aa%3B identical to previously sequenced SW:YIS1_STRCO (EMBL:Y00434) Streptomyces coelicolor insertion element IS110 hypothetical 43.6 kDa protein SC3C8.10%2C 405 aa. Contains Pfam match to entry PF01548 Transposase_9%2C Transposase and PF02371 Transposase_19%2C Transposase;gbkey=CDS;gene=2SCG2.18;product=insertion element;protein_id=NP_625301.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1060406	1060702	.	+	.	ID=id1157;Dbxref=GeneID:1096428;Note=Pfam match to entry PF01548 Transposase_9%2C Transposase%2C score 142.40%2C E-value 7.9e-39;gbkey=misc_feature;gene=2SCG2.18
NC_003888.3	RefSeq	sequence_feature	1060925	1061254	.	+	.	ID=id1158;Dbxref=GeneID:1096428;Note=Pfam match to entry PF02371 Transposase_19%2C Transposase%2C score 176.60%2C E-value 4.2e-49;gbkey=misc_feature;gene=2SCG2.18
NC_003888.3	RefSeq	gene	1061415	1061552	.	-	.	ID=gene992;Dbxref=GeneID:1096429;Name=2SCG2.19c;gbkey=Gene;gene=2SCG2.19c;gene_biotype=protein_coding;gene_synonym=2SCG2.19c;locus_tag=SCO1006
NC_003888.3	RefSeq	CDS	1061415	1061552	.	-	0	ID=cds971;Parent=gene992;Dbxref=Genbank:NP_625302.1,GeneID:1096429;Name=NP_625302.1;Note=2SCG2.19c%2C hypothetical protein%2C len: 45 aa%3B similar to part of TR:CAC01640 (EMBL:AL391072) Streptomyces coelicolor conserved hypothetical protein SC9A4.13%2C 267 aa%3B fasta scores: opt: 140 z-score: 206.9 E(): 0.00053%3B 72.4%25 identity in 29 aa overlap;gbkey=CDS;gene=2SCG2.19c;product=hypothetical protein;protein_id=NP_625302.1;transl_table=11
NC_003888.3	RefSeq	gene	1061871	1063013	.	-	.	ID=gene993;Dbxref=GeneID:1096430;Name=2SCG2.20c;gbkey=Gene;gene=2SCG2.20c;gene_biotype=protein_coding;gene_synonym=2SCG2.20c;locus_tag=SCO1007
NC_003888.3	RefSeq	CDS	1061871	1063013	.	-	0	ID=cds972;Parent=gene993;Dbxref=Genbank:NP_625303.1,GeneID:1096430;Name=NP_625303.1;Note=2SCG2.20c%2C possible oxidoreductase%2C len: 380 aa%3B similar to TR:O54177 (EMBL:AL021411) Streptomyces coelicolor oxidoreductase SC7H1.18%2C 397 aa%3B fasta scores: opt: 842 z-score: 944.5 E(): 0%3B 41.6%25 identity in 368 aa overlap. Contains Pfam matches to entries PF01494 FAD_binding_3%2C FAD binding domain and PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=2SCG2.20c;product=oxidoreductase;protein_id=NP_625303.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1061988	1062581	.	-	.	ID=id1159;Dbxref=GeneID:1096430;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 84.50%2C E-value 2.1e-21;gbkey=misc_feature;gene=2SCG2.20c
NC_003888.3	RefSeq	sequence_feature	1062600	1062998	.	-	.	ID=id1160;Dbxref=GeneID:1096430;Note=Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain%2C score -4.40%2C E-value 0.0012;gbkey=misc_feature;gene=2SCG2.20c
NC_003888.3	RefSeq	ribosome_entry_site	1063021	1063025	.	-	.	ID=id1161;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1063172	1063180	.	+	.	ID=id1162;gbkey=RBS
NC_003888.3	RefSeq	gene	1063185	1063520	.	+	.	ID=gene994;Dbxref=GeneID:1096431;Name=2SCG2.21;gbkey=Gene;gene=2SCG2.21;gene_biotype=protein_coding;gene_synonym=2SCG2.21;locus_tag=SCO1008
NC_003888.3	RefSeq	CDS	1063185	1063520	.	+	0	ID=cds973;Parent=gene994;Dbxref=Genbank:NP_625304.1,GeneID:1096431;Name=NP_625304.1;Note=2SCG2.21%2C hypothetical protein%2C len: 111 aa%3B similar to the plasmid SCP1 protein TR:Q52517 (EMBL:M18263) Streptomyces coelicolor hypothetical 12.1 kDa protein MmyJ%2C 111 aa%3B fasta scores: opt: 246 z-score: 332.3 E(): 5.5e-11%3B 43.8%25 identity in 89 aa overlap;gbkey=CDS;gene=2SCG2.21;product=hypothetical protein;protein_id=NP_625304.1;transl_table=11
NC_003888.3	RefSeq	gene	1063535	1064155	.	-	.	ID=gene995;Dbxref=GeneID:1096432;Name=2SCG2.22c;gbkey=Gene;gene=2SCG2.22c;gene_biotype=protein_coding;gene_synonym=2SCG2.22c;locus_tag=SCO1009
NC_003888.3	RefSeq	CDS	1063535	1064155	.	-	0	ID=cds974;Parent=gene995;Dbxref=Genbank:NP_625305.1,GeneID:1096432;Name=NP_625305.1;Note=2SCG2.22c%2C possible transposase%2C len: 206 aa%3B N-terminal region similar to N-terminal region of TR:Q9XAG8 (EMBL:AL079356) Streptomyces coelicolor transposase SC6G9.06c%2C 247 aa%3B fasta scores: opt: 628 z-score: 727.1 E(): 0%3B 73.7%25 identity in 133 aa overlap;gbkey=CDS;gene=2SCG2.22c;product=transposase;protein_id=NP_625305.1;transl_table=11
NC_003888.3	RefSeq	gene	1064858	1066294	.	+	.	ID=gene996;Dbxref=GeneID:1096433;Name=2SCG2.23;gbkey=Gene;gene=2SCG2.23;gene_biotype=protein_coding;gene_synonym=2SCG2.23;locus_tag=SCO1010
NC_003888.3	RefSeq	CDS	1064858	1066294	.	+	0	ID=cds975;Parent=gene996;Dbxref=Genbank:NP_625306.1,GeneID:1096433;Name=NP_625306.1;Note=2SCG2.23%2C possible integral membrane transport protein%2C len: 478 aa%3B highly similar to TR:O68895 (EMBL:AF056309) Streptomyces argillaceus membrane protein ORFA%2C 414 aa%3B fasta scores: opt: 1923 z-score: 2121.0 E(): 0%3B 82.0%25 identity in 362 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and match to Prosite entry PS00217 Sugar transport proteins signature 2. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG2.23;product=integral membrane transport protein;protein_id=NP_625306.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1064951	1066231	.	+	.	ID=id1163;Dbxref=GeneID:1096433;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 168.90%2C E-value 8.4e-47;gbkey=misc_feature;gene=2SCG2.23
NC_003888.3	RefSeq	sequence_feature	1065287	1065364	.	+	.	ID=id1164;Dbxref=GeneID:1096433;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=2SCG2.23
NC_003888.3	RefSeq	gene	1066337	1068241	.	-	.	ID=gene997;Dbxref=GeneID:1096434;Name=2SCG2.24c;gbkey=Gene;gene=2SCG2.24c;gene_biotype=protein_coding;gene_synonym=2SCG2.24c;locus_tag=SCO1011
NC_003888.3	RefSeq	CDS	1066337	1068241	.	-	0	ID=cds976;Parent=gene997;Dbxref=Genbank:NP_625307.1,GeneID:1096434;Name=NP_625307.1;Note=2SCG2.24c%2C hypothetical protein%2C len: 634 aa%3B similar to TR:Q00509 (EMBL:X6451) Streptomyces ambofaciens hypothetical SrmR protein%2C 604 aa%3B fasta scores: opt: 952 z-score: 1028.3 E(): 0%3B 36.5%25 identity in 600 aa overlap. Contains Pfam match to entry PF01590 GAF%2C GAF domain;gbkey=CDS;gene=2SCG2.24c;product=hypothetical protein;protein_id=NP_625307.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1067549	1067989	.	-	.	ID=id1165;Dbxref=GeneID:1096434;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 92.30%2C E-value 9.5e-24;gbkey=misc_feature;gene=2SCG2.24c
NC_003888.3	RefSeq	gene	1068298	1069098	.	-	.	ID=gene998;Dbxref=GeneID:1096435;Name=2SCG2.25c;gbkey=Gene;gene=2SCG2.25c;gene_biotype=protein_coding;gene_synonym=2SCG2.25c;locus_tag=SCO1012
NC_003888.3	RefSeq	CDS	1068298	1069098	.	-	0	ID=cds977;Parent=gene998;Dbxref=Genbank:NP_625308.1,GeneID:1096435;Name=NP_625308.1;Note=2SCG2.25c%2C probable oxidoreductase%2C len: 266 aa%3B similar to SW:BDHA_ALCEU (EMBL:AF145230) Alcaligenes eutrophus D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) HbdH1%2C 258 aa%3B fasta scores: opt: 586 z-score: 655.1 E(): 5.8e-29%3B 39.3%25 identity in 257 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=2SCG2.25c;product=oxidoreductase;protein_id=NP_625308.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1068322	1068414	.	-	.	ID=id1166;Dbxref=GeneID:1096435;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 20.80%2C E-value 0.00037;gbkey=misc_feature;gene=2SCG2.25c
NC_003888.3	RefSeq	sequence_feature	1068508	1069041	.	-	.	ID=id1167;Dbxref=GeneID:1096435;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 199.40%2C E-value 5.6e-56;gbkey=misc_feature;gene=2SCG2.25c
NC_003888.3	RefSeq	sequence_feature	1068571	1068657	.	-	.	ID=id1168;Dbxref=GeneID:1096435;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=2SCG2.25c
NC_003888.3	RefSeq	gene	1069154	1069633	.	-	.	ID=gene999;Dbxref=GeneID:1096436;Name=2SCG2.26c;gbkey=Gene;gene=2SCG2.26c;gene_biotype=protein_coding;gene_synonym=2SCG2.26c;locus_tag=SCO1013
NC_003888.3	RefSeq	CDS	1069154	1069633	.	-	0	ID=cds978;Parent=gene999;Dbxref=Genbank:NP_625309.1,GeneID:1096436;Name=NP_625309.1;Note=2SCG2.26c%2C possible mut-like protein%2C len: 159 aa%3B similar to TR:Q9K3X1 (EMBL:AL359988) Streptomyces coelicolor  mut-like protein SCD10.05c%2C 184 aa%3B fasta scores: opt: 203 z-score: 264.6 E(): 3.2e-07%3B 35.7%25 identity in 126 aa overlap. Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and match to Prosite entry PS00893 mutT domain signature;gbkey=CDS;gene=2SCG2.26c;product=mut-like protein;protein_id=NP_625309.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1069190	1069576	.	-	.	ID=id1169;Dbxref=GeneID:1096436;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 90.30%2C E-value 3.9e-23;gbkey=misc_feature;gene=2SCG2.26c
NC_003888.3	RefSeq	sequence_feature	1069424	1069483	.	-	.	ID=id1170;Dbxref=GeneID:1096436;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=2SCG2.26c
NC_003888.3	RefSeq	gene	1069702	1071315	.	-	.	ID=gene1000;Dbxref=GeneID:1096437;Name=2SCG2.28c;gbkey=Gene;gene=2SCG2.28c;gene_biotype=protein_coding;gene_synonym=2SCG2.28c;locus_tag=SCO1014
NC_003888.3	RefSeq	CDS	1069702	1071315	.	-	0	ID=cds979;Parent=gene1000;Dbxref=Genbank:NP_625310.1,GeneID:1096437;Name=NP_625310.1;Note=2SCG2.28c%2C probable transferase%2C len: 537 aa%3B similar to SW:LNT_ECOLI (EMBL:X58070) Escherichia coli apolipoprotein N-acyltransferase (EC 2.3.1.-) CutE%2C 512 aa%3B fasta scores: opt: 328 z-score: 352.1 E(): 4.4e-12%3B 26.1%25 identity in 533 aa overlap. Contains Pfam match to entry PF00795 CN_hydrolase%2C Carbon-nitrogen hydrolase. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG2.28c;product=transferase;protein_id=NP_625310.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1069780	1070565	.	-	.	ID=id1171;Dbxref=GeneID:1096437;Note=Pfam match to entry PF00795 CN_hydrolase%2C Carbon-nitrogen hydrolase%2C score -89.40%2C E-value 0.0036;gbkey=misc_feature;gene=2SCG2.28c
NC_003888.3	RefSeq	gene	1071312	1071656	.	-	.	ID=gene1001;Dbxref=GeneID:1096438;Name=2SCG2.29c;gbkey=Gene;gene=2SCG2.29c;gene_biotype=protein_coding;gene_synonym=2SCG2.29c;locus_tag=SCO1015
NC_003888.3	RefSeq	CDS	1071312	1071656	.	-	0	ID=cds980;Parent=gene1001;Dbxref=Genbank:NP_625311.1,GeneID:1096438;Name=NP_625311.1;Note=2SCG2.29c%2C unknown%2C len: 114 aa;gbkey=CDS;gene=2SCG2.29c;product=hypothetical protein;protein_id=NP_625311.1;transl_table=11
NC_003888.3	RefSeq	gene	1071720	1072544	.	-	.	ID=gene1002;Dbxref=GeneID:1096439;Name=2SCG2.30c;gbkey=Gene;gene=2SCG2.30c;gene_biotype=protein_coding;gene_synonym=2SCG2.30c;locus_tag=SCO1016
NC_003888.3	RefSeq	CDS	1071720	1072544	.	-	0	ID=cds981;Parent=gene1002;Dbxref=Genbank:NP_625312.1,GeneID:1096439;Name=NP_625312.1;Note=2SCG2.30c%2C possible hypothetical protein%2C len: 274 aa. Contains possible N-terminal region signal peptide sequence. Rich in alanine and proline amino acid residues. High content in G+C (79.8%25);gbkey=CDS;gene=2SCG2.30c;product=hypothetical protein;protein_id=NP_625312.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1072554	1072557	.	-	.	ID=id1172;gbkey=RBS
NC_003888.3	RefSeq	gene	1072677	1073219	.	-	.	ID=gene1003;Dbxref=GeneID:1096440;Name=2SCG2.31c;gbkey=Gene;gene=2SCG2.31c;gene_biotype=protein_coding;gene_synonym=2SCG2.31c;locus_tag=SCO1017
NC_003888.3	RefSeq	CDS	1072677	1073219	.	-	0	ID=cds982;Parent=gene1003;Dbxref=Genbank:NP_625313.1,GeneID:1096440;Name=NP_625313.1;Note=2SCG2.31c%2C possible lipoprotein%2C len: 180 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains at N-terminal region possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG2.31c;product=lipoprotein;protein_id=NP_625313.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1073118	1073150	.	-	.	ID=id1173;Dbxref=GeneID:1096440;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCG2.31c
NC_003888.3	RefSeq	gene	1073299	1074141	.	-	.	ID=gene1004;Dbxref=GeneID:1096441;Name=2SCG2.32c;gbkey=Gene;gene=2SCG2.32c;gene_biotype=protein_coding;gene_synonym=2SCG2.32c;locus_tag=SCO1018
NC_003888.3	RefSeq	CDS	1073299	1074141	.	-	0	ID=cds983;Parent=gene1004;Dbxref=Genbank:NP_625314.1,GeneID:1096441;Name=NP_625314.1;Note=2SCG2.32c%2C glutamate racemase%2C len: 280 aa%3B similar to SW:MURI_ECOLI (EMBL:) Escherichia coli glutamate racemase (EC 5.1.1.3) MurI%2C 285 aa%3B fasta scores: opt: 359 z-score: 390.2 E(): 3.3e-14%3B 34.4%25 identity in 256 aa overlap. Contains Pfam match to entry PF01177 Asp_Glu_race%2C Aspartate / glutamate racemase and match to Prosite entry PS00923 Aspartate and glutamate racemases signature 1;gbkey=CDS;gene=2SCG2.32c;product=glutamate racemase;protein_id=NP_625314.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1073431	1074078	.	-	.	ID=id1174;Dbxref=GeneID:1096441;Note=Pfam match to entry PF01177 Asp_Glu_race%2C Aspartat;gbkey=misc_feature;gene=2SCG2.32c
NC_003888.3	RefSeq	sequence_feature	1073860	1073886	.	-	.	ID=id1175;Dbxref=GeneID:1096441;Note=PS00923 Aspartate and glutamate racemases signature 1;gbkey=misc_feature;gene=2SCG2.32c
NC_003888.3	RefSeq	gene	1074142	1075377	.	+	.	ID=gene1005;Dbxref=GeneID:1096442;Name=2SCG2.33;gbkey=Gene;gene=2SCG2.33;gene_biotype=protein_coding;gene_synonym=2SCG2.33;locus_tag=SCO1019
NC_003888.3	RefSeq	CDS	1074142	1075377	.	+	0	ID=cds984;Parent=gene1005;Dbxref=Genbank:NP_625315.1,GeneID:1096442;Name=NP_625315.1;Note=2SCG2.33%2C possible integral membrane protein%2C len: 411 aa%3B similar to TR:P74597 (EMBL:D90916) Synechocystis sp. hypothetical 43.6 kDa protein SLR1566%2C 395 aa%3B fasta scores: opt: 1119 z-score: 1282.3 E(): 0%3B 46.3%25 identity in 402 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase and a cleavable N-terminal signal sequence;gbkey=CDS;gene=2SCG2.33;product=hypothetical protein;protein_id=NP_625315.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1074301	1074864	.	+	.	ID=id1176;Dbxref=GeneID:1096442;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 36.20%2C E-value 7.7e-07;gbkey=misc_feature;gene=2SCG2.33
NC_003888.3	RefSeq	gene	1075397	1076719	.	-	.	ID=gene1006;Dbxref=GeneID:1096443;Name=2SCG2.34c;gbkey=Gene;gene=2SCG2.34c;gene_biotype=protein_coding;gene_synonym=2SCG2.34c;locus_tag=SCO1020
NC_003888.3	RefSeq	CDS	1075397	1076719	.	-	0	ID=cds985;Parent=gene1006;Dbxref=Genbank:NP_625316.1,GeneID:1096443;Name=NP_625316.1;Note=2SCG2.34c%2C conserved hypothetical protein%2C len: 440 aa%3B similar to the plasmid encoded SW:TERA_ALCSP (EMBL:M20238) Alcaligenes sp. tellurium resistance protein TerA%2C 339 aa%3B fasta scores: opt: 515 z-score: 412.2 E(): 1.9e-15%3B 35.1%25 identity in 396 aa overlap. Contains Pfam match to entry PF02342 TerD;gbkey=CDS;gene=2SCG2.34c;product=hypothetical protein;protein_id=NP_625316.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1076036	1076194	.	-	.	ID=id1177;Dbxref=GeneID:1096443;Note=region rich in alanine and proline amino acid residues. High content in G+C (93.08%25);gbkey=misc_feature;gene=2SCG2.34c
NC_003888.3	RefSeq	sequence_feature	1076219	1076581	.	-	.	ID=id1178;Dbxref=GeneID:1096443;Note=Pfam match to entry PF02342 TerD%2C %2C score 115.00%2C E-value 1.4e-30;gbkey=misc_feature;gene=2SCG2.34c
NC_003888.3	RefSeq	gene	1077009	1077458	.	+	.	ID=gene1007;Dbxref=GeneID:1096444;Name=2SCG2.35;gbkey=Gene;gene=2SCG2.35;gene_biotype=protein_coding;gene_synonym=2SCG2.35,SCG20A.01;locus_tag=SCO1021
NC_003888.3	RefSeq	CDS	1077009	1077458	.	+	0	ID=cds986;Parent=gene1007;Dbxref=Genbank:NP_733520.1,GeneID:1096444;Name=NP_733520.1;Note=SCG20A.01%2C unknown (fragment)%2C len: >110 aa~2SCG2.35%2C unknown (fragment)%2C len: >72 aa;gbkey=CDS;gene=2SCG2.35;product=hypothetical protein;protein_id=NP_733520.1;transl_table=11
NC_003888.3	RefSeq	gene	1077501	1078328	.	+	.	ID=gene1008;Dbxref=GeneID:1096445;Name=SCG20A.02;gbkey=Gene;gene=SCG20A.02;gene_biotype=protein_coding;gene_synonym=SCG20A.02;locus_tag=SCO1022
NC_003888.3	RefSeq	CDS	1077501	1078328	.	+	0	ID=cds987;Parent=gene1008;Dbxref=Genbank:NP_625317.1,GeneID:1096445;Name=NP_625317.1;Note=SCG20A.02%2C hypothetical protein%2C len: 275 aa%3B similar to C-terminal part of TR:Q9XFN9 (EMBL:AC000107) Arabidopsis thaliana F17F8.6%2C 325 aa%3B fasta scores: opt: 491 z-score: 580.3 E(): 7.6e-25%3B 34.1%25 identity in 305 aa overlap and to TR:Q9HZI4 (EMBL:AE004727) Pseudomonas aeruginosa hypothetical protein PA3022%2C 268 aa%3B fasta scores: opt: 688 Z-score: 795.9 E(): 1.1e-36%3B 45.788%25 identity in 273 aa overlap;gbkey=CDS;gene=SCG20A.02;product=hypothetical protein;protein_id=NP_625317.1;transl_table=11
NC_003888.3	RefSeq	gene	1078574	1079182	.	+	.	ID=gene1009;Dbxref=GeneID:1096446;Name=SCG20A.03;gbkey=Gene;gene=SCG20A.03;gene_biotype=protein_coding;gene_synonym=SCG20A.03;locus_tag=SCO1023
NC_003888.3	RefSeq	CDS	1078574	1079182	.	+	0	ID=cds988;Parent=gene1009;Dbxref=Genbank:NP_625318.1,GeneID:1096446;Name=NP_625318.1;Note=SCG20A.03%2C possible membrane protein%2C len: 202 aa%3B similar to TR:Q9RIY8 (EMBL:AL109962) Streptomyces coelicolor hypothetical 20.8 kD protein%2C SCJ1.26%2C 193 aa%3B fasta scores: opt: 201 z-score: 245.7 E(): 3.3e-06%3B 35.4%25 identity in 195 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG20A.03;product=hypothetical protein;protein_id=NP_625318.1;transl_table=11
NC_003888.3	RefSeq	gene	1079228	1081729	.	+	.	ID=gene1010;Dbxref=GeneID:1096447;Name=SCG20A.04;gbkey=Gene;gene=SCG20A.04;gene_biotype=protein_coding;gene_synonym=SCG20A.04;locus_tag=SCO1024
NC_003888.3	RefSeq	CDS	1079228	1081729	.	+	0	ID=cds989;Parent=gene1010;Dbxref=Genbank:NP_625319.1,GeneID:1096447;Name=NP_625319.1;Note=SCG20A.04%2C hypothetical protein%2C len: 833 aa%3B highly similar in its C-terminal domain to SW:SP5K_BACSU (EMBL:X59412) Bacillus subtilis stage V sporulation protein K SpoVK%2C 322 aa%3B fasta scores: opt: 699 z-score: 720.9 E(): 1.1e-32%3B 42.6%25 identity in 265 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCG20A.04;product=hypothetical protein;protein_id=NP_625319.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1081079	1081102	.	+	.	ID=id1179;Dbxref=GeneID:1096447;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCG20A.04
NC_003888.3	RefSeq	gene	1081780	1084137	.	-	.	ID=gene1011;Dbxref=GeneID:1096448;Name=SCG20A.05c;gbkey=Gene;gene=SCG20A.05c;gene_biotype=protein_coding;gene_synonym=SCG20A.05c;locus_tag=SCO1025
NC_003888.3	RefSeq	CDS	1081780	1084137	.	-	0	ID=cds990;Parent=gene1011;Dbxref=Genbank:NP_625320.1,GeneID:1096448;Name=NP_625320.1;Note=SCG20A.05c%2C possible integral membrane protein%2C len: 785 aa. Contains possible hydrophobic membrane spanning regions. High content in alanine and leucine amino acid residues;gbkey=CDS;gene=SCG20A.05c;product=hypothetical protein;protein_id=NP_625320.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1084146	1084149	.	-	.	ID=id1180;gbkey=RBS
NC_003888.3	RefSeq	gene	1084395	1085219	.	+	.	ID=gene1012;Dbxref=GeneID:1096449;Name=SCG20A.06;gbkey=Gene;gene=SCG20A.06;gene_biotype=protein_coding;gene_synonym=SCG20A.06;locus_tag=SCO1026
NC_003888.3	RefSeq	CDS	1084395	1085219	.	+	0	ID=cds991;Parent=gene1012;Dbxref=Genbank:NP_625321.1,GeneID:1096449;Name=NP_625321.1;Note=SCG20A.06%2C probable transcriptional regulatory protein%2C len: 274 aa%3B similar to SW:AGAR_ECOLI (EMBL:U18997) Escherichia coli  aga operon transcriptional repressor AgaR%2C 269 aa%3B fasta scores: opt: 524 z-score: 597.5 E(): 8.4e-26%3B 36.6%25 identity in 246 aa overlap. Contains Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family and match to Prosite entry PS00894 Bacterial regulatory proteins%2C deoR family signature. Contains also possible helix-turn-helix motif at residues 26..47 (+2.94 SD);gbkey=CDS;gene=SCG20A.06;product=transcriptional regulator;protein_id=NP_625321.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1084428	1085132	.	+	.	ID=id1181;Dbxref=GeneID:1096449;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 224.70%2C E-value 1.3e-63;gbkey=misc_feature;gene=SCG20A.06
NC_003888.3	RefSeq	sequence_feature	1084428	1084532	.	+	.	ID=id1182;Dbxref=GeneID:1096449;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature;gbkey=misc_feature;gene=SCG20A.06
NC_003888.3	RefSeq	gene	1085351	1085824	.	+	.	ID=gene1013;Dbxref=GeneID:1096450;Name=SCG20A.07;gbkey=Gene;gene=SCG20A.07;gene_biotype=protein_coding;gene_synonym=SCG20A.07;locus_tag=SCO1027
NC_003888.3	RefSeq	CDS	1085351	1085824	.	+	0	ID=cds992;Parent=gene1013;Dbxref=Genbank:NP_625322.1,GeneID:1096450;Name=NP_625322.1;Note=SCG20A.07%2C hypothetical protein%2C len: 157 aa%3B similar to SW:Y0BR_MYCTU (EMBL:Z77724) Mycobacterium tuberculosis hypothetical 19.0 kD protein CY227.27c%2C 167 aa%3B fasta scores: opt: 218 z-score: 283.7 E(): 2.5e-08%3B 30.7%25 identity in 150 aa overlap;gbkey=CDS;gene=SCG20A.07;product=hypothetical protein;protein_id=NP_625322.1;transl_table=11
NC_003888.3	RefSeq	gene	1085859	1086983	.	-	.	ID=gene1014;Dbxref=GeneID:1096451;Name=SCG20A.08c;gbkey=Gene;gene=SCG20A.08c;gene_biotype=protein_coding;gene_synonym=SCG20A.08c;locus_tag=SCO1028
NC_003888.3	RefSeq	CDS	1085859	1086983	.	-	0	ID=cds993;Parent=gene1014;Dbxref=Genbank:NP_625323.1,GeneID:1096451;Name=NP_625323.1;Note=SCG20A.08c%2C possible lyase%2C len: 374 aa%3B highly similar to TR:O69652 (EMBL:AL022121) Mycobacterium tuberculosis lyase MTV025.032%2C 346 aa%3B fasta scores: opt: 1469 z-score: 1762.4 E(): 0%3B 63.3%25 identity in 341 aa overlap. Contains Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzyme;gbkey=CDS;gene=SCG20A.08c;product=lyase;protein_id=NP_625323.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1085979	1086878	.	-	.	ID=id1183;Dbxref=GeneID:1096451;Note=Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzyme%2C score 165.20%2C E-value 1.1e-45;gbkey=misc_feature;gene=SCG20A.08c
NC_003888.3	RefSeq	ribosome_entry_site	1086991	1086996	.	-	.	ID=id1184;gbkey=RBS
NC_003888.3	RefSeq	gene	1087360	1087587	.	+	.	ID=gene1015;Dbxref=GeneID:1096452;Name=SCG20A.09;gbkey=Gene;gene=SCG20A.09;gene_biotype=protein_coding;gene_synonym=SCG20A.09;locus_tag=SCO1029
NC_003888.3	RefSeq	CDS	1087360	1087587	.	+	0	ID=cds994;Parent=gene1015;Dbxref=Genbank:NP_625324.1,GeneID:1096452;Name=NP_625324.1;Note=SCG20A.09%2C unknown%2C len: 75 aa;gbkey=CDS;gene=SCG20A.09;product=hypothetical protein;protein_id=NP_625324.1;transl_table=11
NC_003888.3	RefSeq	gene	1087803	1088321	.	+	.	ID=gene1016;Dbxref=GeneID:1096453;Name=SCG20A.10;gbkey=Gene;gene=SCG20A.10;gene_biotype=protein_coding;gene_synonym=SCG20A.10;locus_tag=SCO1030
NC_003888.3	RefSeq	CDS	1087803	1088321	.	+	0	ID=cds995;Parent=gene1016;Dbxref=Genbank:NP_625325.1,GeneID:1096453;Name=NP_625325.1;Note=SCG20A.10%2C conserved hypothetical protein%2C len: 172 aa%3B similar to TR:CAB88805 (EMBL:AL35383) Streptomyces coelicolor hypothetical 20.2 kD protein (fragment) SCE6.01c%2C 183 aa%3B fasta scores: opt: 227 z-score: 278.3 E(): 5e-08%3B 36.6%25 identity in 134 aa overlap;gbkey=CDS;gene=SCG20A.10;product=hypothetical protein;protein_id=NP_625325.1;transl_table=11
NC_003888.3	RefSeq	gene	1088547	1091114	.	-	.	ID=gene1017;Dbxref=GeneID:1096454;Name=SCG20A.11c;gbkey=Gene;gene=SCG20A.11c;gene_biotype=protein_coding;gene_synonym=SCG20A.11c;locus_tag=SCO1031
NC_003888.3	RefSeq	CDS	1088547	1091114	.	-	0	ID=cds996;Parent=gene1017;Dbxref=Genbank:NP_625326.1,GeneID:1096454;Name=NP_625326.1;Note=SCG20A.11c%2C possible ABC transport system integral membrane protein%2C len: 855 aa%3B similar to TR:CAB89462 (EMBL:AL354048) Streptomyces coelicolor ABC transporter integral membrane protein SCE25.31%2C 843 aa%3B fasta scores: opt: 1459 z-score: 1443.9 E(): 0%3B 34.7%25 identity in 864 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG20A.11c;product=ABC transporter;protein_id=NP_625326.1;transl_table=11
NC_003888.3	RefSeq	gene	1091111	1091860	.	-	.	ID=gene1018;Dbxref=GeneID:1096455;Name=SCG20A.12c;gbkey=Gene;gene=SCG20A.12c;gene_biotype=protein_coding;gene_synonym=SCG20A.12c;locus_tag=SCO1032
NC_003888.3	RefSeq	CDS	1091111	1091860	.	-	0	ID=cds997;Parent=gene1018;Dbxref=Genbank:NP_625327.1,GeneID:1096455;Name=NP_625327.1;Note=SCG20A.12c%2C probable ABC transport system ATP-binding protein%2C len: 249 aa%3B similar to many%2C e.g. TR:CAB89461 (EMBL:AL354048) Streptomyces coelicolor ABC transport system ATP-binding protein SCE25.31%2C 256 aa%3B fasta scores: opt: 1112 z-score: 953.1 E(): 0%3B 67.9%25 identity in 240 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCG20A.12c;product=ABC transporter ATP-binding protein;protein_id=NP_625327.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1091120	1091125	.	-	.	ID=id1185;Dbxref=GeneID:1096455;gbkey=RBS;gene=SCG20A.12c
NC_003888.3	RefSeq	sequence_feature	1091189	1091743	.	-	.	ID=id1186;Dbxref=GeneID:1096455;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 192.30%2C E-value 7.5e-54;gbkey=misc_feature;gene=SCG20A.12c
NC_003888.3	RefSeq	sequence_feature	1091372	1091416	.	-	.	ID=id1187;Dbxref=GeneID:1096455;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCG20A.12c
NC_003888.3	RefSeq	sequence_feature	1091699	1091722	.	-	.	ID=id1188;Dbxref=GeneID:1096455;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCG20A.12c
NC_003888.3	RefSeq	gene	1091857	1092141	.	-	.	ID=gene1019;Dbxref=GeneID:1096456;Name=SCG20A.13c;gbkey=Gene;gene=SCG20A.13c;gene_biotype=protein_coding;gene_synonym=SCG20A.13c;locus_tag=SCO1033
NC_003888.3	RefSeq	CDS	1091857	1092141	.	-	0	ID=cds998;Parent=gene1019;Dbxref=Genbank:NP_625328.1,GeneID:1096456;Name=NP_625328.1;Note=SCG20A.13c%2C possible membrane protein%2C len: 94 aa%3B low similarity to TR:Q9WYF1 (EMBL:AE001713) Thermotoga maritima hypothetical 10.3 kD protein TM0315%2C 83 aa%3B fasta scores: opt: 95 z-score: 135.8 E(): 4.4%3B 29.7%25 identity in 74 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCG20A.13c;product=hypothetical protein;protein_id=NP_625328.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1092150	1092156	.	-	.	ID=id1189;gbkey=RBS
NC_003888.3	RefSeq	gene	1092244	1092897	.	+	.	ID=gene1020;Dbxref=GeneID:1096457;Name=SCG20A.14;gbkey=Gene;gene=SCG20A.14;gene_biotype=protein_coding;gene_synonym=SCG20A.14;locus_tag=SCO1034
NC_003888.3	RefSeq	CDS	1092244	1092897	.	+	0	ID=cds999;Parent=gene1020;Dbxref=Genbank:NP_625329.1,GeneID:1096457;Name=NP_625329.1;Note=SCG20A.14%2C possible tetR-family regulatory protein%2C len: 217 aa%3B similar to TR:Q9RJ10 (EMBL:AL109962) Streptomyces coelicolor  transcriptional regulatory protein SCJ1.04%2C 207 aa%3B fasta scores: opt: 208 z-score: 253.6 E(): 1.2e-06%3B 27.2%25 identity in 195 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SCG20A.14;product=TetR family transcriptional regulator;protein_id=NP_625329.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1092352	1092492	.	+	.	ID=id1190;Dbxref=GeneID:1096457;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 48.70%2C E-value 5.6e-11;gbkey=misc_feature;gene=SCG20A.14
NC_003888.3	RefSeq	ribosome_entry_site	1092896	1092899	.	+	.	ID=id1191;gbkey=RBS
NC_003888.3	RefSeq	gene	1092908	1093495	.	+	.	ID=gene1021;Dbxref=GeneID:1096458;Name=SCG20A.15;gbkey=Gene;gene=SCG20A.15;gene_biotype=protein_coding;gene_synonym=SCG20A.15;locus_tag=SCO1035
NC_003888.3	RefSeq	CDS	1092908	1093495	.	+	0	ID=cds1000;Parent=gene1021;Dbxref=Genbank:NP_625330.1,GeneID:1096458;Name=NP_625330.1;Note=SCG20A.15%2C unknown%2C len: 195 aa;gbkey=CDS;gene=SCG20A.15;product=hypothetical protein;protein_id=NP_625330.1;transl_table=11
NC_003888.3	RefSeq	gene	1093492	1094400	.	+	.	ID=gene1022;Dbxref=GeneID:1096459;Name=SCG20A.16;gbkey=Gene;gene=SCG20A.16;gene_biotype=protein_coding;gene_synonym=SCG20A.16;locus_tag=SCO1036
NC_003888.3	RefSeq	CDS	1093492	1094400	.	+	0	ID=cds1001;Parent=gene1022;Dbxref=Genbank:NP_625331.1,GeneID:1096459;Name=NP_625331.1;Note=SCG20A.16%2C probable phosphotriesterase-family protein%2C len: 302 aa%3B similar to SW:PHP_ECOLI (EMBL:U18997) Escherichia coli phosphotriesterase homology protein Php%2C 292 aa%3B fasta scores: opt: 319 z-score: 370.9 E(): 3.5e-13%3B 28.0%25 identity in 286 aa overlap. Contains Pfam match to entry PF02126 PTE%2C Phosphotriesterase family and match to Prosite entry PS01323 Phosphotriesterase family signature 2;gbkey=CDS;gene=SCG20A.16;product=phosphotriesterase-family protein;protein_id=NP_625331.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1093615	1094079	.	+	.	ID=id1192;Dbxref=GeneID:1096459;Note=Pfam match to entry PF02126 PTE%2C Phosphotriesterase family%2C score 60.10%2C E-value 2.7e-15;gbkey=misc_feature;gene=SCG20A.16
NC_003888.3	RefSeq	sequence_feature	1093936	1093983	.	+	.	ID=id1193;Dbxref=GeneID:1096459;Note=PS01323 Phosphotriesterase family signature 2;gbkey=misc_feature;gene=SCG20A.16
NC_003888.3	RefSeq	ribosome_entry_site	1094453	1094457	.	+	.	ID=id1194;gbkey=RBS
NC_003888.3	RefSeq	gene	1094465	1094866	.	+	.	ID=gene1023;Dbxref=GeneID:1096460;Name=SCG20A.17;gbkey=Gene;gene=SCG20A.17;gene_biotype=protein_coding;gene_synonym=SCG20A.17;locus_tag=SCO1037
NC_003888.3	RefSeq	CDS	1094465	1094866	.	+	0	ID=cds1002;Parent=gene1023;Dbxref=Genbank:NP_625332.1,GeneID:1096460;Name=NP_625332.1;Note=SCG20A.17%2C hypothetical protein%2C len: 133 aa%3B similar to TR:O32183 (EMBL:Z99120) Bacillus subtilis hypothetical protein YusQ%2C 127 aa%3B fasta scores: opt: 280 z-score: 359.2 E(): 1.6e-12%3B 36.4%25 identity in 129 aa overlap;gbkey=CDS;gene=SCG20A.17;product=hypothetical protein;protein_id=NP_625332.1;transl_table=11
NC_003888.3	RefSeq	gene	1094911	1095258	.	+	.	ID=gene1024;Dbxref=GeneID:1096461;Name=SCG20A.18;gbkey=Gene;gene=SCG20A.18;gene_biotype=protein_coding;gene_synonym=SCG20A.18;locus_tag=SCO1038
NC_003888.3	RefSeq	CDS	1094911	1095258	.	+	0	ID=cds1003;Parent=gene1024;Dbxref=Genbank:NP_625333.1,GeneID:1096461;Name=NP_625333.1;Note=SCG20A.18%2C hypothetical protein%2C len: 115 aa%3B similar to TR:O06633 (EMBL:Z95618) Mycobacterium tuberculosis hypothetical 12.5 kD protein aa%3B fasta scores: opt: 138 z-score: 194.2 E(): 0.0024%3B 34.0%25 identity in 97 aa overlap;gbkey=CDS;gene=SCG20A.18;product=hypothetical protein;protein_id=NP_625333.1;transl_table=11
NC_003888.3	RefSeq	gene	1095280	1096518	.	-	.	ID=gene1025;Dbxref=GeneID:1096462;Name=SCG20A.19c;gbkey=Gene;gene=SCG20A.19c;gene_biotype=protein_coding;gene_synonym=SCG20A.19c;locus_tag=SCO1039
NC_003888.3	RefSeq	CDS	1095280	1096518	.	-	0	ID=cds1004;Parent=gene1025;Dbxref=Genbank:NP_625334.1,GeneID:1096462;Name=NP_625334.1;Note=SCG20A.19c%2C possible ROK family regulatory protein%2C len: 412 aa%3B similar to TR:O50502 (EMBL:AL009199) Streptomyces coelicolor probable transcriptional repressor protein SC7B7.05%2C 403 aa%3B fasta scores: opt: 456 z-score: 485.8 E(): 1.4e-19%3B 27.7%25 identity in 390 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family;gbkey=CDS;gene=SCG20A.19c;product=regulatory protein;protein_id=NP_625334.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1095676	1095912	.	-	.	ID=id1195;Dbxref=GeneID:1096462;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 70.00%2C E-value 9.7e-20;gbkey=misc_feature;gene=SCG20A.19c
NC_003888.3	RefSeq	ribosome_entry_site	1096529	1096532	.	-	.	ID=id1196;gbkey=RBS
NC_003888.3	RefSeq	gene	1096556	1097206	.	-	.	ID=gene1026;Dbxref=GeneID:1096463;Name=SCG20A.20c;gbkey=Gene;gene=SCG20A.20c;gene_biotype=protein_coding;gene_synonym=SCG20A.20c;locus_tag=SCO1040
NC_003888.3	RefSeq	CDS	1096556	1097206	.	-	0	ID=cds1005;Parent=gene1026;Dbxref=Genbank:NP_625335.1,GeneID:1096463;Name=NP_625335.1;Note=SCG20A.20c%2C probable DNA repair protein%2C len: 216 aa%3B similar to SW:ALKB_ECOLI (EMBL:J02607) Escherichia coli DNA repair protein AlkB%2C 216 aa%3B fasta scores: opt: 302 z-score: 361.8 E(): 1.1e-12%3B 34.3%25 identity in 207 aa overlap;gbkey=CDS;gene=SCG20A.20c;product=DNA repair protein;protein_id=NP_625335.1;transl_table=11
NC_003888.3	RefSeq	gene	1097282	1098505	.	+	.	ID=gene1027;Dbxref=GeneID:1096464;Name=SCG20A.21;gbkey=Gene;gene=SCG20A.21;gene_biotype=protein_coding;gene_synonym=SCG20A.21;locus_tag=SCO1041
NC_003888.3	RefSeq	CDS	1097282	1098505	.	+	0	ID=cds1006;Parent=gene1027;Dbxref=Genbank:NP_625336.1,GeneID:1096464;Name=NP_625336.1;Note=SCG20A.21%2C hypothetical protein%2C len: 407 aa%3B similar to SW:YGJO_ECOLI (EMBL:U18997) Escherichia coli hypothetical 43.4 kD protein in EbgC-UxaA intergenic region Ygjo%2C 388 aa%3B fasta scores: opt: 956 z-score: 1103.1 E(): 0%3B 44.0%25 identity in 373 aa overlap;gbkey=CDS;gene=SCG20A.21;product=hypothetical protein;protein_id=NP_625336.1;transl_table=11
NC_003888.3	RefSeq	gene	1098616	1098966	.	-	.	ID=gene1028;Dbxref=GeneID:1096465;Name=SCG20A.22c;gbkey=Gene;gene=SCG20A.22c;gene_biotype=protein_coding;gene_synonym=SCG20A.22c;locus_tag=SCO1042
NC_003888.3	RefSeq	CDS	1098616	1098966	.	-	0	ID=cds1007;Parent=gene1028;Dbxref=Genbank:NP_625337.1,GeneID:1096465;Name=NP_625337.1;Note=SCG20A.22c%2C hypothetical protein%2C len: 116 aa%3B similar to N-terminal part of TR:Q9UYH1 (EMBL:AJ248287) Pyrococcus abyssi glutamine-fructose-6-phosphate transaminase related%2C 341 aa%3B fasta scores: opt: 135 z-score: 173.1 E(): 0.036%3B 33.0%25 identity in 103 aa overlap;gbkey=CDS;gene=SCG20A.22c;product=hypothetical protein;protein_id=NP_625337.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1099020	1099024	.	+	.	ID=id1197;gbkey=RBS
NC_003888.3	RefSeq	gene	1099030	1099809	.	+	.	ID=gene1029;Dbxref=GeneID:1096466;Name=SCG20A.23;gbkey=Gene;gene=SCG20A.23;gene_biotype=protein_coding;gene_synonym=SCG20A.23;locus_tag=SCO1043
NC_003888.3	RefSeq	CDS	1099030	1099809	.	+	0	ID=cds1008;Parent=gene1029;Dbxref=Genbank:NP_625338.1,GeneID:1096466;Name=NP_625338.1;Note=SCG20A.23%2C probable transcriptional regulatory protein%2C len: 259 aa%3B similar to SW:SRLR_ECOLI (EMBL:J02708) Escherichia coli glucitol operon repressor SrlR%2C 257 aa%3B fasta scores: opt: 429 z-score: 487.9 E(): 1.1e-19%3B 30.6%25 identity in 258 aa overlap. Contains Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family and match to Prosite entry PS00894 Bacterial regulatory proteins%2C deoR family signature. Contains also a possible helix-turn-helix motif at residues 20..41 (+2.55 SD);gbkey=CDS;gene=SCG20A.23;product=transcriptional regulator;protein_id=NP_625338.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1099045	1099743	.	+	.	ID=id1198;Dbxref=GeneID:1096466;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 215.60%2C E-value 7.5e-61;gbkey=misc_feature;gene=SCG20A.23
NC_003888.3	RefSeq	sequence_feature	1099045	1099149	.	+	.	ID=id1199;Dbxref=GeneID:1096466;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature;gbkey=misc_feature;gene=SCG20A.23
NC_003888.3	RefSeq	gene	1099831	1100772	.	-	.	ID=gene1030;Dbxref=GeneID:1096467;Name=SCG20A.24c;gbkey=Gene;gene=SCG20A.24c;gene_biotype=protein_coding;gene_synonym=SCG20A.24c;locus_tag=SCO1044
NC_003888.3	RefSeq	CDS	1099831	1100772	.	-	0	ID=cds1009;Parent=gene1030;Dbxref=Genbank:NP_625339.1,GeneID:1096467;Name=NP_625339.1;Note=SCG20A.24c%2C possible hypothetical protein%2C len: 313 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCG20A.24c;product=hypothetical protein;protein_id=NP_625339.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1100781	1100785	.	-	.	ID=id1200;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1100956	1100959	.	+	.	ID=id1201;gbkey=RBS
NC_003888.3	RefSeq	gene	1100965	1101198	.	+	.	ID=gene1031;Dbxref=GeneID:1096468;Name=SCG20A.25;gbkey=Gene;gene=SCG20A.25;gene_biotype=protein_coding;gene_synonym=SCG20A.25;locus_tag=SCO1045
NC_003888.3	RefSeq	CDS	1100965	1101198	.	+	0	ID=cds1010;Parent=gene1031;Dbxref=Genbank:NP_625340.1,GeneID:1096468;Name=NP_625340.1;Note=SCG20A.25%2C possible metal associated protein%2C len: 77 aa%3B similar to SW:COPP_HELFE (EMBL:AJ001932) Helicobacter felis cop associated protein (copper ion binding protein) CopP%2C 66 aa%3B fasta scores: opt: 153 z-score: 210.7 E(): 0.00029%3B 40.7%25 identity in 59 aa overlap and to TR:Q9RDJ5 (EMBL:AL136519) Streptomyces coelicolor regulator (fragment) SCC57A.01%2C >47 aa%3B fasta scores: opt: 146 z-score: 186.0 E(): 9.3e-05%3B 53.2%25 identity in 47 aa overlap. Contains Pfam match to entry PF00403 HMA%2C Heavy-metal-associated domain;gbkey=CDS;gene=SCG20A.25;product=metal associated protein;protein_id=NP_625340.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1100995	1101189	.	+	.	ID=id1202;Dbxref=GeneID:1096468;Note=Pfam match to entry PF00403 HMA%2C Heavy-metal-associated domain%2C score 54.90%2C E-value 3.3e-14;gbkey=misc_feature;gene=SCG20A.25
NC_003888.3	RefSeq	ribosome_entry_site	1101273	1101278	.	+	.	ID=id1203;gbkey=RBS
NC_003888.3	RefSeq	gene	1101284	1103545	.	+	.	ID=gene1032;Dbxref=GeneID:1096469;Name=SCG20A.26;gbkey=Gene;gene=SCG20A.26;gene_biotype=protein_coding;gene_synonym=SCG20A.26;locus_tag=SCO1046
NC_003888.3	RefSeq	CDS	1101284	1103545	.	+	0	ID=cds1011;Parent=gene1032;Dbxref=Genbank:NP_625341.1,GeneID:1096469;Name=NP_625341.1;Note=SCG20A.26%2C probable metal transporter ATPase%2C len: 753 aa%3B similar to SW:ATCU_RHIME (EMBL:AF129004) Rhizobium meliloti copper-transporting ATPase (EC 3.6.1.36) ActP%2C 827 aa%3B fasta scores: opt: 1748 z-score: 1773.4 E(): 0%3B 42.4%25 identity in 767 aa overlap and to TR:Q9RDJ4 (EMBL:AL136519) Streptomyces coelicolor  cation-transporting P-type ATPase SCC57A.02%2C 760 aa%3B fasta scores: opt: 3484 z-score: 2834.6 E(): 0%3B 73.9%25 identity in 761 aa overlap. Contains Pfam matches to entries PF00403 HMA%2C Heavy-metal-associated domain and PF00122 E1-E2_ATPase%2C E1-E2 ATPase and matches to Prosite entries PS01047 Heavy-metal-associated domain%2C PS00154 E1-E2 ATPases phosphorylation site and PS01229 Hypothetical cof family signature 2. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG20A.26;product=metal transporter ATPase;protein_id=NP_625341.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1101317	1101508	.	+	.	ID=id1204;Dbxref=GeneID:1096469;Note=Pfam match to entry PF00403 HMA%2C Heavy-metal-associated domain%2C score 91.20%2C E-value 1.3e-24;gbkey=misc_feature;gene=SCG20A.26
NC_003888.3	RefSeq	sequence_feature	1101329	1101415	.	+	.	ID=id1205;Dbxref=GeneID:1096469;Note=PS01047 Heavy-metal-associated domain;gbkey=misc_feature;gene=SCG20A.26
NC_003888.3	RefSeq	sequence_feature	1101923	1103512	.	+	.	ID=id1206;Dbxref=GeneID:1096469;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 648.50%2C E-value 3.5e-191;gbkey=misc_feature;gene=SCG20A.26
NC_003888.3	RefSeq	sequence_feature	1102613	1102633	.	+	.	ID=id1207;Dbxref=GeneID:1096469;Note=PS00154 E1-E2 ATPases phosphorylation site;gbkey=misc_feature;gene=SCG20A.26
NC_003888.3	RefSeq	sequence_feature	1103213	1103281	.	+	.	ID=id1208;Dbxref=GeneID:1096469;Note=PS01229 Hypothetical cof family signature 2;gbkey=misc_feature;gene=SCG20A.26
NC_003888.3	RefSeq	repeat_region	1103654	1103788	.	+	.	ID=id1209;Note=4x degenerate repeat: CG(G/A)(G/A)CCGCAACCGCCATCCC(T/A)GCCCGCC(A/G)(C/T)CCC;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1103835	1104527	.	+	.	ID=gene1033;Dbxref=GeneID:1096470;Name=SCG20A.27;gbkey=Gene;gene=SCG20A.27;gene_biotype=protein_coding;gene_synonym=SCG20A.27;locus_tag=SCO1047
NC_003888.3	RefSeq	CDS	1103835	1104527	.	+	0	ID=cds1012;Parent=gene1033;Dbxref=Genbank:NP_625342.1,GeneID:1096470;Name=NP_625342.1;Note=SCG20A.27%2C possible integral membrane protein%2C len: 230 aa%3B similar to TR:O86625 (EMBL:AL031155) Streptomyces coelicolor  integral membrane protein SC3A7.24c%2C 201 aa%3B fasta scores: opt: 277 z-score: 278.6 E(): 4.9e-08%3B 41.7%25 identity in 168 aa overlap. Contains Pfam match to entry PF01569 PAP2%2C PAP2 superfamily and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG20A.27;product=hypothetical protein;protein_id=NP_625342.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1104054	1104497	.	+	.	ID=id1210;Dbxref=GeneID:1096470;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score 72.90%2C E-value 6.7e-18;gbkey=misc_feature;gene=SCG20A.27
NC_003888.3	RefSeq	gene	1104500	1104952	.	-	.	ID=gene1034;Dbxref=GeneID:1096471;Name=SCG20A.28c;gbkey=Gene;gene=SCG20A.28c;gene_biotype=protein_coding;gene_synonym=SCG20A.28c;locus_tag=SCO1048
NC_003888.3	RefSeq	CDS	1104500	1104952	.	-	0	ID=cds1013;Parent=gene1034;Dbxref=Genbank:NP_625343.1,GeneID:1096471;Name=NP_625343.1;Note=SCG20A.28c%2C possible hypothetical protein%2C len: 150 aa%3B similar to TR:Q9Z4W (EMBL:AL035654) Streptomyces coelicolor hypothetical 16.4 kD protein SCE8.15c%2C 151 aa%3B fasta scores: opt: 727 z-score: 866.9 E(): 0%3B 72.1%25 identity in 147 aa overlap;gbkey=CDS;gene=SCG20A.28c;product=hypothetical protein;protein_id=NP_625343.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1104959	1104964	.	-	.	ID=id1211;gbkey=RBS
NC_003888.3	RefSeq	gene	1105031	1106194	.	-	.	ID=gene1035;Dbxref=GeneID:1096472;Name=SCG20A.29c;gbkey=Gene;gene=SCG20A.29c;gene_biotype=protein_coding;gene_synonym=SCG20A.29c;locus_tag=SCO1049
NC_003888.3	RefSeq	CDS	1105031	1106194	.	-	0	ID=cds1014;Parent=gene1035;Dbxref=Genbank:NP_625344.1,GeneID:1096472;Name=NP_625344.1;Note=SCG20A.29c%2C probable  oxidoreductase%2C len: 387 aa%3B similar to SW:GFO_ZYMMO (EMBL:M97379) Zymomonas mobilis glucose-fructose oxidoreductase precursor (EC 1.1.99.28) Gfo%2C 439 aa%3B fasta scores: opt: 287 z-score: 318.4 E(): 2.9e-10%3B 26.6%25 identity in 350 aa overlap. Contains Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCG20A.29c;product=oxidoreductase;protein_id=NP_625344.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1105439	1106173	.	-	.	ID=id1212;Dbxref=GeneID:1096472;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 188.90%2C E-value 8.2e-53;gbkey=misc_feature;gene=SCG20A.29c
NC_003888.3	RefSeq	ribosome_entry_site	1106200	1106205	.	-	.	ID=id1213;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1106392	1106396	.	+	.	ID=id1214;gbkey=RBS
NC_003888.3	RefSeq	gene	1106404	1107006	.	+	.	ID=gene1036;Dbxref=GeneID:1096473;Name=SCG20A.30;gbkey=Gene;gene=SCG20A.30;gene_biotype=protein_coding;gene_synonym=SCG20A.30;locus_tag=SCO1050
NC_003888.3	RefSeq	CDS	1106404	1107006	.	+	0	ID=cds1015;Parent=gene1036;Dbxref=Genbank:NP_625345.1,GeneID:1096473;Name=NP_625345.1;Note=SCG20A.30%2C possible DNA protection protein%2C len: 200 aa%3B similar to SW:DPS_ECOLI (EMBL:X69337) Escherichia coli DNA protection during starvation protein Dps%2C 166 aa%3B fasta scores: opt: 200 z-score: 257.4 E(): 7.4e-07%3B 27.5%25 identity in 138 aa overlap. Contains Pfam match to entry PF02047 DPS%2C Dps protein family and matches to Prosite entries PS00818 Dps protein family signature 1 and PS00819 Dps protein family signature 2;gbkey=CDS;gene=SCG20A.30;product=DNA protection protein;protein_id=NP_625345.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1106566	1106979	.	+	.	ID=id1215;Dbxref=GeneID:1096473;Note=Pfam match to entry PF02047 DPS%2C Dps protein family%2C score 110.40%2C E-value 3.4e-29;gbkey=misc_feature;gene=SCG20A.30
NC_003888.3	RefSeq	sequence_feature	1106620	1106670	.	+	.	ID=id1216;Dbxref=GeneID:1096473;Note=PS00818 Dps protein family signature 1;gbkey=misc_feature;gene=SCG20A.30
NC_003888.3	RefSeq	sequence_feature	1106698	1106742	.	+	.	ID=id1217;Dbxref=GeneID:1096473;Note=PS00819 Dps protein family signature 2;gbkey=misc_feature;gene=SCG20A.30
NC_003888.3	RefSeq	gene	1107018	1108091	.	+	.	ID=gene1037;Dbxref=GeneID:1096474;Name=SCG20A.31;gbkey=Gene;gene=SCG20A.31;gene_biotype=protein_coding;gene_synonym=SCG20A.31;locus_tag=SCO1051
NC_003888.3	RefSeq	CDS	1107018	1108091	.	+	0	ID=cds1016;Parent=gene1037;Dbxref=Genbank:NP_625346.1,GeneID:1096474;Name=NP_625346.1;Note=SCG20A.31%2C possible integral membrane protein%2C len: 357 aa%3B similar to TR:Q9S290 (EMBL:AL096849) Streptomyces coelicolor  membrane protein SCI11.29%2C 354 aa%3B fasta scores: opt: 422 z-score: 473.8 E(): 6.5e-19%3B 30.5%25 identity in 357 aa overlap;gbkey=CDS;gene=SCG20A.31;product=hypothetical protein;protein_id=NP_625346.1;transl_table=11
NC_003888.3	RefSeq	gene	1108110	1108778	.	-	.	ID=gene1038;Dbxref=GeneID:1096475;Name=SCG20A.32c;gbkey=Gene;gene=SCG20A.32c;gene_biotype=protein_coding;gene_synonym=SCG20A.32c;locus_tag=SCO1052
NC_003888.3	RefSeq	CDS	1108110	1108778	.	-	0	ID=cds1017;Parent=gene1038;Dbxref=Genbank:NP_625347.1,GeneID:1096475;Name=NP_625347.1;Note=SCG20A.32c%2C possible regulatory protein%2C len: 222 aa%3B similar to C-terminal part of TR:CAB91114 (EMBL:AL355913) Streptomyces coelicolor regulatory protein SC5H4.02%2C 552 aa%3B fasta scores: opt: 195 z-score: 192.1 E(): 0.0032%3B 30.5%25 identity in 210 aa overlap. Contains possible helix-turn-helix motif at residues 172..193 (+3.29 SD);gbkey=CDS;gene=SCG20A.32c;product=regulatory protein;protein_id=NP_625347.1;transl_table=11
NC_003888.3	RefSeq	gene	1109004	1109432	.	-	.	ID=gene1039;Dbxref=GeneID:1096476;Name=SCG20A.33c;gbkey=Gene;gene=SCG20A.33c;gene_biotype=protein_coding;gene_synonym=SCG20A.33c;locus_tag=SCO1053
NC_003888.3	RefSeq	CDS	1109004	1109432	.	-	0	ID=cds1018;Parent=gene1039;Dbxref=Genbank:NP_625348.1,GeneID:1096476;Name=NP_625348.1;Note=SCG20A.33c%2C unknown%2C len: 142. Doubtful CDS;gbkey=CDS;gene=SCG20A.33c;product=hypothetical protein;protein_id=NP_625348.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1109439	1109443	.	+	.	ID=id1218;gbkey=RBS
NC_003888.3	RefSeq	gene	1109450	1110652	.	+	.	ID=gene1040;Dbxref=GeneID:1096477;Name=SCG20A.34;gbkey=Gene;gene=SCG20A.34;gene_biotype=protein_coding;gene_synonym=SCG20A.34;locus_tag=SCO1054
NC_003888.3	RefSeq	CDS	1109450	1110652	.	+	0	ID=cds1019;Parent=gene1040;Dbxref=Genbank:NP_625349.1,GeneID:1096477;Name=NP_625349.1;Note=SCG20A.34%2C possible aminotransferase%2C len: 400 aa%3B similar to TR:Q9XAD5 (EMBL:AL096839) Streptomyces coelicolor  aminotransferase SCC22.03c%2C 418 aa%3B fasta scores: opt: 397 z-score: 446.1 E(): 2.3e-17%3B 27.7%25 identity in 423 aa overlap and to TR:Q9RY03 (EMBL:AE001877) Deinococcus radiodurans NifS-related protein DR0151%2C 401 aa%3B fasta scores: opt: 791 z-score: 884.2 E(): 0%3B 41.2%25 identity in 396 aa overlap. Contains Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V;gbkey=CDS;gene=SCG20A.34;product=aminotransferase;protein_id=NP_625349.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1109549	1110622	.	+	.	ID=id1219;Dbxref=GeneID:1096477;Note=Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V%2C score -2.20%2C E-value 3.8e-07;gbkey=misc_feature;gene=SCG20A.34
NC_003888.3	RefSeq	gene	1110755	1113025	.	-	.	ID=gene1041;Dbxref=GeneID:1096478;Name=SCG20A.35c;gbkey=Gene;gene=SCG20A.35c;gene_biotype=protein_coding;gene_synonym=SCG20A.35c,SCG22.01c;locus_tag=SCO1055
NC_003888.3	RefSeq	CDS	1110755	1113025	.	-	0	ID=cds1020;Parent=gene1041;Dbxref=Genbank:NP_733521.1,GeneID:1096478;Name=NP_733521.1;Note=catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose%2C glucose%2C mannose%2C fructose%2C maltose%2C isomaltose%2C nigerose%2C kojibiose%2C sucrose%2C and trehalose%3B shows higher activity against alpha-xylosyl fluoride%2C isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose)%2C and alpha-xyloside in xyloglucan oligosaccharides;gbkey=CDS;gene=SCG20A.35c;product=alpha-xylosidase;protein_id=NP_733521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1110995	1112086	.	-	.	ID=id1220;Dbxref=GeneID:1096478;Note=Pfam match to entry PF01055 Glyco_hydro_31%2C Glycosyl hydrolases family 31%2C score 369.10%2C E-value 1.3e-107;gbkey=misc_feature;gene=SCG20A.35c
NC_003888.3	RefSeq	sequence_feature	1112000	1112554	.	-	.	ID=id1221;Dbxref=GeneID:1096478;Note=Pfam match to entry PF01055 Glyco_hydro_31%2C Glycosyl hydrolases family 31%2C score 227.50%2C E-value 3.5e-66;gbkey=misc_feature;gene=SCG20A.35c
NC_003888.3	RefSeq	ribosome_entry_site	1113030	1113034	.	-	.	ID=id1222;gbkey=RBS
NC_003888.3	RefSeq	gene	1113337	1114596	.	+	.	ID=gene1042;Dbxref=GeneID:1096479;Name=SCG22.02;gbkey=Gene;gene=SCG22.02;gene_biotype=protein_coding;gene_synonym=SCG22.02;locus_tag=SCO1056
NC_003888.3	RefSeq	CDS	1113337	1114596	.	+	0	ID=cds1021;Parent=gene1042;Dbxref=Genbank:NP_625350.1,GeneID:1096479;Name=NP_625350.1;Note=SCG22.02%2C possible sugar transport sugar binding protein%2C len: 419 aa%3B similar to TR:CAB90879 (EMBL:AL355752) Streptomyces coelicolor maltose-binding protein MalE%2C 423 aa%3B fasta scores: opt: 433 z-score: 507.0 E(): 9.2e-21%3B 28.7%25 identity in 380 aa overlap and to SW:MALX_STRPN (EMBL:L08611) Streptococcus pneumoniae maltose/maltodextrin-binding protein precursor MalX%2C 423 aa%3B fasta scores: opt: 255 z-score: 299.6 E(): 3.3e-09%3B 23.9%25 identity in 372 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also a possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCG22.02;product=sugar transport sugar binding protein;protein_id=NP_625350.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1113418	1113450	.	+	.	ID=id1223;Dbxref=GeneID:1096479;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCG22.02
NC_003888.3	RefSeq	sequence_feature	1113766	1114587	.	+	.	ID=id1224;Dbxref=GeneID:1096479;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 141.60%2C E-value 9.6e-39;gbkey=misc_feature;gene=SCG22.02
NC_003888.3	RefSeq	gene	1114608	1115573	.	+	.	ID=gene1043;Dbxref=GeneID:1096480;Name=SCG22.03;gbkey=Gene;gene=SCG22.03;gene_biotype=protein_coding;gene_synonym=SCG22.03;locus_tag=SCO1057
NC_003888.3	RefSeq	CDS	1114608	1115573	.	+	0	ID=cds1022;Parent=gene1043;Dbxref=Genbank:NP_625351.1,GeneID:1096480;Name=NP_625351.1;Note=SCG22.03%2C possible sugar transport integral membrane protein%2C len: 321 aa%3B similar to TR:Q9RK91 (EMBL:AL117322) Streptomyces coelicolor binding-protein-dependent transport protein SCF1.13%2C 317 aa%3B fasta scores: opt: 681 z-score: 798.6 E(): 0%3B 35.0%25 identity in 317 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG22.03;product=sugar transport integral membrane protein;protein_id=NP_625351.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1115232	1115465	.	+	.	ID=id1225;Dbxref=GeneID:1096480;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 77.80%2C E-value 2.3e-19;gbkey=misc_feature;gene=SCG22.03
NC_003888.3	RefSeq	sequence_feature	1115235	1115321	.	+	.	ID=id1226;Dbxref=GeneID:1096480;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCG22.03
NC_003888.3	RefSeq	gene	1115579	1116406	.	+	.	ID=gene1044;Dbxref=GeneID:1096481;Name=SCG22.04;gbkey=Gene;gene=SCG22.04;gene_biotype=protein_coding;gene_synonym=SCG22.04;locus_tag=SCO1058
NC_003888.3	RefSeq	CDS	1115579	1116406	.	+	0	ID=cds1023;Parent=gene1044;Dbxref=Genbank:NP_625352.1,GeneID:1096481;Name=NP_625352.1;Note=SCG22.04%2C possible sugar transport integral membrane protein%2C len: 275 aa%3B similar to TR:Q9RUF0 (EMBL:AE001988) Deinococcus radiodurans ABC transporter%2C permease%2C MalFG family%2C DR1436 aa%3B fasta scores: opt: 550 z-score: 629.9 E(): 1.3e-27%3B 32.9%25 identity in 283 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG22.04;product=sugar transport integral membrane protein;protein_id=NP_625352.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1116056	1116280	.	+	.	ID=id1227;Dbxref=GeneID:1096481;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 62.40%2C E-value 9.7e-15;gbkey=misc_feature;gene=SCG22.04
NC_003888.3	RefSeq	sequence_feature	1116059	1116145	.	+	.	ID=id1228;Dbxref=GeneID:1096481;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCG22.04
NC_003888.3	RefSeq	gene	1116447	1117826	.	+	.	ID=gene1045;Dbxref=GeneID:1096482;Name=SCG22.05;gbkey=Gene;gene=SCG22.05;gene_biotype=protein_coding;gene_synonym=SCG22.05;locus_tag=SCO1059
NC_003888.3	RefSeq	CDS	1116447	1117826	.	+	0	ID=cds1024;Parent=gene1045;Dbxref=Genbank:NP_625353.1,GeneID:1096482;Name=NP_625353.1;Note=SCG22.05%2C probable beta-glucosidase%2C len: 459 aa%3B similar to TR:Q59976 (EMBL:Z29625) Streptomyces sp. beta-glucosidase (EC 3.2.1.21) Bgl3%2C 479 aa%3B fasta scores: opt: 1627 z-score: 1895.8 E(): 0%3B 57.6%25 identity in 458 aa overlap. Contains Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1 and match to Prosite entry PS00653 Glycosyl hydrolases family 1 N-terminal signature;gbkey=CDS;gene=SCG22.05;product=beta-glucosidase;protein_id=NP_625353.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1116453	1117817	.	+	.	ID=id1229;Dbxref=GeneID:1096482;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 681.00%2C E-value 5.7e-201;gbkey=misc_feature;gene=SCG22.05
NC_003888.3	RefSeq	sequence_feature	1116477	1116521	.	+	.	ID=id1230;Dbxref=GeneID:1096482;Note=PS00653 Glycosyl hydrolases family 1 N-terminal signature;gbkey=misc_feature;gene=SCG22.05
NC_003888.3	RefSeq	gene	1117870	1119111	.	-	.	ID=gene1046;Dbxref=GeneID:1096483;Name=SCG22.06c;gbkey=Gene;gene=SCG22.06c;gene_biotype=protein_coding;gene_synonym=SCG22.06c;locus_tag=SCO1060
NC_003888.3	RefSeq	CDS	1117870	1119111	.	-	0	ID=cds1025;Parent=gene1046;Dbxref=Genbank:NP_625354.1,GeneID:1096483;Name=NP_625354.1;Note=SCG22.06%2C probable transcriptional repressor%2C len: 413 aa%3B similar to TR:O05180 (EMBL:Z71474) Bacillus megaterium Xyl repressor XylR%2C 388 aa%3B fasta scores: opt: 382 z-score: 417.8 E(): 8.5e-16%3B 31.3%25 identity in 386 aa overlap and to TR:CAB61583 (EMBL:AL133210) Streptomyces coelicolor possible xylose repressor SCF37.02%2C 402 aa%3B fasta scores: opt: 586 z-score: 523.0 E(): 1.5e-23%3B 48.0%25 identity in 396 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family and a possible helix-turn-helix motif at residues 35..56 (+3.03 SD);gbkey=CDS;gene=SCG22.06c;product=transcriptional repressor;protein_id=NP_625354.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1118254	1118835	.	-	.	ID=id1231;Dbxref=GeneID:1096483;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 119.10%2C E-value 2.4e-34;gbkey=misc_feature;gene=SCG22.06c
NC_003888.3	RefSeq	gene	1119167	1120834	.	-	.	ID=gene1047;Dbxref=GeneID:1096484;Name=SCG22.07c;gbkey=Gene;gene=SCG22.07c;gene_biotype=protein_coding;gene_synonym=SCG22.07c;locus_tag=SCO1061
NC_003888.3	RefSeq	CDS	1119167	1120834	.	-	0	ID=cds1026;Parent=gene1047;Dbxref=Genbank:NP_625355.1,GeneID:1096484;Name=NP_625355.1;Note=SCG22.07%2C probable bifunctional protein ( sugar binding protein/sugar hydrolase)%2C len: 555 aa%3B N-terminal domain similar to N-terminal domain of TR:O86727 (EMBL:AL031515) Streptomyces coelicolor  cellulase SC5C7.30c%2C 890 aa%3B blastp scores: Score %3D 84 (29.6 bits)%2C Expect %3D 0.031%2C Sum P(3) %3D 0.030 Identities %3D 61/233 (26%25)%2C Positives %3D 89/233 (38%25) and C-terminal domain similar to C-terminal domain of SW:E13B_OERXA (EMBL:AF052745) Oerskovia xanthineolytica glucan enco-1%2C3-glucosidase precursor (EC 3.2.1.39)%2C 548 aa%3B fasta scores: opt: 368 Z-score: 394.8 E(): 2.3e-14%3B 41.447%25 identity) in 152 aa overlap. Contains 3x Pfam match to entry PF02012 BNR%2C BNR repeat and Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCG22.07c;product=bifunctional sugar binding protein/sugar hydrolase;protein_id=NP_625355.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1119173	1119559	.	-	.	ID=id1232;Dbxref=GeneID:1096484;Note=Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies.%2C score 76.50%2C E-value 5.3e-19;gbkey=misc_feature;gene=SCG22.07c
NC_003888.3	RefSeq	sequence_feature	1120142	1120177	.	-	.	ID=id1233;Dbxref=GeneID:1096484;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 15.60%2C E-value 1.2;gbkey=misc_feature;gene=SCG22.07c
NC_003888.3	RefSeq	sequence_feature	1120334	1120369	.	-	.	ID=id1234;Dbxref=GeneID:1096484;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 16.50%2C E-value 0.65;gbkey=misc_feature;gene=SCG22.07c
NC_003888.3	RefSeq	sequence_feature	1120532	1120567	.	-	.	ID=id1235;Dbxref=GeneID:1096484;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 17.40%2C E-value 0.35;gbkey=misc_feature;gene=SCG22.07c
NC_003888.3	RefSeq	ribosome_entry_site	1120842	1120847	.	-	.	ID=id1236;gbkey=RBS
NC_003888.3	RefSeq	gene	1120925	1123006	.	-	.	ID=gene1048;Dbxref=GeneID:1096485;Name=SCG22.08c;gbkey=Gene;gene=SCG22.08c;gene_biotype=protein_coding;gene_synonym=SCG22.08c;locus_tag=SCO1062
NC_003888.3	RefSeq	CDS	1120925	1123006	.	-	0	ID=cds1027;Parent=gene1048;Dbxref=Genbank:NP_625356.1,GeneID:1096485;Name=NP_625356.1;Note=SCG22.08c%2C possible hydrolase%2C len: 693 aa%3B similar to SW:BGLR_ECOLI (EMBL:M14641) Escherichia coli beta-glucuronidase (EC 3.2.1.31) GusA%2C 603 aa%3B fasta scores: opt: 386 z-score: 439.2 E(): 5.5e-17%3B 25.3%25 identity in 582 aa overlap and to TR:Q9RIU6 (EMBL: AL133278) Streptomyces coelicolor hydrolase SCM11.15c%2C 872 aa%3B fasta scores: opt: 977 z-score: 1111.4 E(): 0%3B 37.1%25 identity in 596 aa overlap;gbkey=CDS;gene=SCG22.08c;product=hydrolase;protein_id=NP_625356.1;transl_table=11
NC_003888.3	RefSeq	gene	1123067	1123960	.	-	.	ID=gene1049;Dbxref=GeneID:1096486;Name=SCG22.09c;gbkey=Gene;gene=SCG22.09c;gene_biotype=protein_coding;gene_synonym=SCG22.09c;locus_tag=SCO1063
NC_003888.3	RefSeq	CDS	1123067	1123960	.	-	0	ID=cds1028;Parent=gene1049;Dbxref=Genbank:NP_625357.1,GeneID:1096486;Name=NP_625357.1;Note=SCG22.09c%2C possible sugar transport integral membrane protein%2C len: 297 aa%3B similar to SW:LACG_AGRRD (EMBL:X66596) Agrobacterium radiobacter lactose transport system permease LacG%2C 273 aa%3B fasta scores: opt: 514 z-score: 627.5 E(): 1.8e-27%3B 35.1%25 identity in 282 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG22.09c;product=sugar transport integral membrane protein;protein_id=NP_625357.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1123223	1123447	.	-	.	ID=id1237;Dbxref=GeneID:1096486;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 54.10%2C E-value 3.1e-12;gbkey=misc_feature;gene=SCG22.09c
NC_003888.3	RefSeq	gene	1123963	1124898	.	-	.	ID=gene1050;Dbxref=GeneID:1096487;Name=SCG22.10c;gbkey=Gene;gene=SCG22.10c;gene_biotype=protein_coding;gene_synonym=SCG22.10c;locus_tag=SCO1064
NC_003888.3	RefSeq	CDS	1123963	1124898	.	-	0	ID=cds1029;Parent=gene1050;Dbxref=Genbank:NP_625358.1,GeneID:1096487;Name=NP_625358.1;Note=SCG22.10c%2C probable sugar transport integral membrane protein%2C len: 311 aa%3B similar to TR:AAF37728 (EMBL:AF086819) Thermomonospora fusca cellobiose transport permease BglA%2C 302 aa%3B fasta scores: opt: 664 z-score: 802.8 E(): 0%3B 38.6%25 identity in 280 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG22.10c;product=sugar transport integral membrane protein;protein_id=NP_625358.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1124068	1124301	.	-	.	ID=id1238;Dbxref=GeneID:1096487;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.40%2C E-value 1.5e-13;gbkey=misc_feature;gene=SCG22.10c
NC_003888.3	RefSeq	sequence_feature	1124212	1124298	.	-	.	ID=id1239;Dbxref=GeneID:1096487;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCG22.10c
NC_003888.3	RefSeq	gene	1124895	1126256	.	-	.	ID=gene1051;Dbxref=GeneID:1096488;Name=SCG22.11c;gbkey=Gene;gene=SCG22.11c;gene_biotype=protein_coding;gene_synonym=SCG22.11c;locus_tag=SCO1065
NC_003888.3	RefSeq	CDS	1124895	1126256	.	-	0	ID=cds1030;Parent=gene1051;Dbxref=Genbank:NP_625359.1,GeneID:1096488;Name=NP_625359.1;Note=SCG22.11c%2C possible sugar transport sugar binding protein%2C len: 453 aa%3B similar to SW:LACE_AGRRD (EMBL:X66596) Agrobacterium radiobacter lactose-binding protein precursor LacE%2C 422 aa%3B fasta scores: opt: 273 z-score: 296.9 E(): 4.6e-09%3B 23.8%25 identity in 420 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCG22.11c;product=sugar transport sugar binding protein;protein_id=NP_625359.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1125069	1125815	.	-	.	ID=id1240;Dbxref=GeneID:1096488;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 68.20%2C E-value 3.9e-18;gbkey=misc_feature;gene=SCG22.11c
NC_003888.3	RefSeq	ribosome_entry_site	1126265	1126269	.	-	.	ID=id1241;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1126522	1126525	.	+	.	ID=id1242;gbkey=RBS
NC_003888.3	RefSeq	gene	1126535	1127557	.	+	.	ID=gene1052;Dbxref=GeneID:1096489;Name=SCG22.12;gbkey=Gene;gene=SCG22.12;gene_biotype=protein_coding;gene_synonym=SCG22.12;locus_tag=SCO1066
NC_003888.3	RefSeq	CDS	1126535	1127557	.	+	0	ID=cds1031;Parent=gene1052;Dbxref=Genbank:NP_625360.1,GeneID:1096489;Name=NP_625360.1;Note=SCG22.12%2C probable lacI-family transcriptional regulator%2C len: 340 aa%3B similar to SW:CYTR_ECOLI (EMBL:X03683) Escherichia coli transcriptional repressor CytR%2C 341 aa%3B fasta scores: opt: 608 z-score: 692.2 E(): 4.4e-31%3B 34.2%25 identity in 339 aa overlap. Contains Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins%2C lacI family signature and possible helix-turn-helix motif at residues 4..25 (+6.04 SD);gbkey=CDS;gene=SCG22.12;product=LacI family transcriptional regulator;protein_id=NP_625360.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1126550	1126606	.	+	.	ID=id1243;Dbxref=GeneID:1096489;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCG22.12
NC_003888.3	RefSeq	sequence_feature	1126712	1127446	.	+	.	ID=id1244;Dbxref=GeneID:1096489;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 134.90%2C E-value 1.5e-36;gbkey=misc_feature;gene=SCG22.12
NC_003888.3	RefSeq	gene	1127704	1128876	.	+	.	ID=gene1053;Dbxref=GeneID:1096490;Name=SCG22.13;gbkey=Gene;gene=SCG22.13;gene_biotype=protein_coding;gene_synonym=SCG22.13;locus_tag=SCO1067
NC_003888.3	RefSeq	CDS	1127704	1128876	.	+	0	ID=cds1032;Parent=gene1053;Dbxref=Genbank:NP_625361.1,GeneID:1096490;Name=NP_625361.1;Note=SCG22.13%2C possible integral membrane transport protein%2C len: 390 aa%3B similar to TR:Q9RRI8 (EMBL:AE002079) Deinococcus radiodurans transport protein%2C DR2502%2C 471 aa%3B fasta scores: opt: 774 z-score: 797.8 E(): 0%3B 40.3%25 identity in 387 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG22.13;product=integral membrane transport protein;protein_id=NP_625361.1;transl_table=11
NC_003888.3	RefSeq	gene	1128954	1129694	.	+	.	ID=gene1054;Dbxref=GeneID:1096491;Name=SCG22.14;gbkey=Gene;gene=SCG22.14;gene_biotype=protein_coding;gene_synonym=SCG22.14;locus_tag=SCO1068
NC_003888.3	RefSeq	CDS	1128954	1129694	.	+	0	ID=cds1033;Parent=gene1054;Dbxref=Genbank:NP_625362.1,GeneID:1096491;Name=NP_625362.1;Note=SCG22.14%2C conserved hypothetical protein%2C len: 246 aa%3B similar to TR:CAB92209 (EMBL:AL356592) Streptomyces coelicolor hypothetical 27.6 kD protein SC9H11.20%2C 255 aa%3B fasta scores: opt: 369 z-score: 455.9 E(): 6.4e-18%3B 37.0%25 identity in 257 aa overlap;gbkey=CDS;gene=SCG22.14;product=hypothetical protein;protein_id=NP_625362.1;transl_table=11
NC_003888.3	RefSeq	gene	1129716	1130195	.	-	.	ID=gene1055;Dbxref=GeneID:1096492;Name=SCG22.15c;gbkey=Gene;gene=SCG22.15c;gene_biotype=protein_coding;gene_synonym=SCG22.15c;locus_tag=SCO1069
NC_003888.3	RefSeq	CDS	1129716	1130195	.	-	0	ID=cds1034;Parent=gene1055;Dbxref=Genbank:NP_625363.1,GeneID:1096492;Name=NP_625363.1;Note=SCG22.15c%2C possible marR-family transcriptional regulator%2C len: 159 aa%3B similar to TR:Q9X8V0 (EMBL:AL049826) Streptomyces coelicolor transcriptional regulator SCH24.36c%2C 154 aa%3B fasta scores: opt: 302 z-score: 391.5 E(): 2.5e-14%3B 41.4%25 identity in 128 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and match to Prosite entry PS01117 Bacterial regulatory proteins%2C marR family signature. Contains also a possible helix-turn-helix motif at residues 89..110 (+4.56 SD);gbkey=CDS;gene=SCG22.15c;product=MarR family transcriptional regulator;protein_id=NP_625363.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1129719	1130000	.	-	.	ID=id1245;Dbxref=GeneID:1096492;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 42.70%2C E-value 8.5e-09;gbkey=misc_feature;gene=SCG22.15c
NC_003888.3	RefSeq	sequence_feature	1129782	1129886	.	-	.	ID=id1246;Dbxref=GeneID:1096492;Note=PS01117 Bacterial regulatory proteins%2C marR family signature;gbkey=misc_feature;gene=SCG22.15c
NC_003888.3	RefSeq	gene	1130429	1131094	.	-	.	ID=gene1056;Dbxref=GeneID:1096493;Name=SCG22.16c;gbkey=Gene;gene=SCG22.16c;gene_biotype=protein_coding;gene_synonym=SCG22.16c;locus_tag=SCO1070
NC_003888.3	RefSeq	CDS	1130429	1131094	.	-	0	ID=cds1035;Parent=gene1056;Dbxref=Genbank:NP_625364.1,GeneID:1096493;Name=NP_625364.1;Note=SCG22.16c%2C possible two component system response regulator%2C len: 221 aa%3B similar to TR:O69816 (EMBL:AL023496) Streptomyces coelicolor two component regulator SC1A6.11%2C 224 aa%3B fasta scores: opt: 872 z-score: 1006.3 E(): 0%3B 64.8%25 identity in 216 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Contains also a possible helix-turn-helix motif at residues 170..191 (+2.64 SD);gbkey=CDS;gene=SCG22.16c;product=two component system response regulator;protein_id=NP_625364.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1130444	1130641	.	-	.	ID=id1247;Dbxref=GeneID:1096493;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 71.50%2C E-value 1.8e-17;gbkey=misc_feature;gene=SCG22.16c
NC_003888.3	RefSeq	sequence_feature	1130744	1131091	.	-	.	ID=id1248;Dbxref=GeneID:1096493;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 133.10%2C E-value 5.1e-36;gbkey=misc_feature;gene=SCG22.16c
NC_003888.3	RefSeq	gene	1131091	1132338	.	-	.	ID=gene1057;Dbxref=GeneID:1096494;Name=SCG22.17c;gbkey=Gene;gene=SCG22.17c;gene_biotype=protein_coding;gene_synonym=SCG22.17c;locus_tag=SCO1071
NC_003888.3	RefSeq	CDS	1131091	1132338	.	-	0	ID=cds1036;Parent=gene1057;Dbxref=Genbank:NP_625365.1,GeneID:1096494;Name=NP_625365.1;Note=SCG22.17c%2C possible two component system sensor kinase%2C len: 415 aa%3B similar to TR:Q9X8S1 (EMBL:AL049754) Streptomyces coelicolor two component system sensor kinase SCH10.32c%2C 441 aa%3B fasta scores: opt: 723 z-score: 761.0 E(): 0%3B 40.6%25 identity in 382 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG22.17c;product=two component system sensor kinase;protein_id=NP_625365.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1131101	1131108	.	-	.	ID=id1249;Dbxref=GeneID:1096494;gbkey=RBS;gene=SCG22.17c
NC_003888.3	RefSeq	gene	1132462	1132683	.	+	.	ID=gene1058;Dbxref=GeneID:1096495;Name=SCG22.18;gbkey=Gene;gene=SCG22.18;gene_biotype=protein_coding;gene_synonym=SCG22.18;locus_tag=SCO1072
NC_003888.3	RefSeq	CDS	1132462	1132683	.	+	0	ID=cds1037;Parent=gene1058;Dbxref=Genbank:NP_625366.1,GeneID:1096495;Name=NP_625366.1;Note=SCG22.18%2C unknown%2C len: 73 aa. High G+C content (84.01%25);gbkey=CDS;gene=SCG22.18;product=hypothetical protein;protein_id=NP_625366.1;transl_table=11
NC_003888.3	RefSeq	gene	1132744	1134012	.	-	.	ID=gene1059;Dbxref=GeneID:1096496;Name=SCG22.19c;gbkey=Gene;gene=SCG22.19c;gene_biotype=protein_coding;gene_synonym=SCG22.19c;locus_tag=SCO1073
NC_003888.3	RefSeq	CDS	1132744	1134012	.	-	0	ID=cds1038;Parent=gene1059;Dbxref=Genbank:NP_625367.1,GeneID:1096496;Name=NP_625367.1;Note=SCG22.19c%2C possible hydrogenase%2C len: 422 aa%3B similar to SW:BCHP_RHOCA (EMBL:Z11165) Rhodobacter capsulatus geranylgeranyl hydrogenase BchP%2C 391 aa%3B fasta scores: opt: 386 z-score: 432.9 E(): 1.2e-16%3B 33.2%25 identity in 319 aa overlap. Contains Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain;gbkey=CDS;gene=SCG22.19c;product=hydrogenase;protein_id=NP_625367.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1133581	1133964	.	-	.	ID=id1250;Dbxref=GeneID:1096496;Note=Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain%2C score -4.30%2C E-value 0.0011;gbkey=misc_feature;gene=SCG22.19c
NC_003888.3	RefSeq	ribosome_entry_site	1134145	1134149	.	+	.	ID=id1251;gbkey=RBS
NC_003888.3	RefSeq	gene	1134157	1135512	.	+	.	ID=gene1060;Dbxref=GeneID:1096497;Name=SCG22.20;gbkey=Gene;gene=SCG22.20;gene_biotype=protein_coding;gene_synonym=SCG22.20;locus_tag=SCO1074
NC_003888.3	RefSeq	CDS	1134157	1135512	.	+	0	ID=cds1039;Parent=gene1060;Dbxref=Genbank:NP_625368.1,GeneID:1096497;Name=NP_625368.1;Note=SCG22.20%2C possible peptidase%2C len: 451 aa%3B similar to TR:Q9X7E4 (EMBL:AL049478) Mycobacterium leprae hypothetical 46.6 kD protein%2C 442 aa%3B fasta scores: opt: 1103 z-score: 1270.5 E(): 0%3B 43.8%25 identity in 443 aa overlap. Contains Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40;gbkey=CDS;gene=SCG22.20;product=hypothetical protein;protein_id=NP_625368.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1134217	1135329	.	+	.	ID=id1252;Dbxref=GeneID:1096497;Note=Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40%2C score 125.30%2C E-value 5.2e-35;gbkey=misc_feature;gene=SCG22.20
NC_003888.3	RefSeq	gene	1135646	1136689	.	-	.	ID=gene1061;Dbxref=GeneID:1096498;Name=SCG22.21c;gbkey=Gene;gene=SCG22.21c;gene_biotype=protein_coding;gene_synonym=SCG22.21c;locus_tag=SCO1075
NC_003888.3	RefSeq	CDS	1135646	1136689	.	-	0	ID=cds1040;Parent=gene1061;Dbxref=Genbank:NP_625369.1,GeneID:1096498;Name=NP_625369.1;Note=SCG22.21c%2C possible bifunctional protein (ATP/GTP binding protein/MutT-like)%2C len: 347 aa%3B N-terminal domain similar to TR:O88042 (EMBL:AL031541) Streptomyces coelicolor ATP/GTP binding protein SCI35.04c%2C 174 aa%3B fasta scores: opt: 462 z-score: 521.1 E(): 1.5e-21%3B 47.2%25 identity in 180 aa overlap and C-terminal domain similar to TR:CAB85162 (EMBL:AL162757) Neisseria meningitidis MutT-like protein NMA1942%2C 174 aa%3B fasta scores: opt: 148 z-score: 174.6 E(): 0.03%3B 28.9%25 identity in 121 aa overlap. Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCG22.21c;product=hypothetical protein;protein_id=NP_625369.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1135928	1136011	.	-	.	ID=id1253;Dbxref=GeneID:1096498;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 27.30%2C E-value 2.7e-06;gbkey=misc_feature;gene=SCG22.21c
NC_003888.3	RefSeq	sequence_feature	1136645	1136668	.	-	.	ID=id1254;Dbxref=GeneID:1096498;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCG22.21c
NC_003888.3	RefSeq	ribosome_entry_site	1136697	1136701	.	-	.	ID=id1255;gbkey=RBS
NC_003888.3	RefSeq	gene	1136858	1137052	.	-	.	ID=gene1062;Dbxref=GeneID:1096499;Name=SCG22.22c;gbkey=Gene;gene=SCG22.22c;gene_biotype=protein_coding;gene_synonym=SCG22.22c;locus_tag=SCO1076
NC_003888.3	RefSeq	CDS	1136858	1137052	.	-	0	ID=cds1041;Parent=gene1062;Dbxref=Genbank:NP_625370.1,GeneID:1096499;Name=NP_625370.1;Note=SCG22.22c%2C possible hypothetical protein%2C len: 64 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCG22.22c;product=hypothetical protein;protein_id=NP_625370.1;transl_table=11
NC_003888.3	RefSeq	gene	1137148	1138101	.	-	.	ID=gene1063;Dbxref=GeneID:1096500;Name=SCG22.23c;gbkey=Gene;gene=SCG22.23c;gene_biotype=protein_coding;gene_synonym=SCG22.23c;locus_tag=SCO1077
NC_003888.3	RefSeq	CDS	1137148	1138101	.	-	0	ID=cds1042;Parent=gene1063;Dbxref=Genbank:NP_625371.1,GeneID:1096500;Name=NP_625371.1;Note=SCG22.23c%2C probable sugar kinase%2C len: 317 aa%3B similar to SW:GLK_BACSU (EMBL:D84432) Bacillus subtilis glucokinase (EC 2.7.1.2) GlcK%2C 321 aa%3B fasta scores: opt: 495 z-score: 504.0 E(): 1.3e-20%3B 31.4%25 identity in 312 aa overlap. Contains match to Prosite entry PS01125 ROK family signature;gbkey=CDS;gene=SCG22.23c;product=sugar kinase;protein_id=NP_625371.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1137607	1137690	.	-	.	ID=id1256;Dbxref=GeneID:1096500;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SCG22.23c
NC_003888.3	RefSeq	gene	1138342	1139391	.	+	.	ID=gene1064;Dbxref=GeneID:1096501;Name=SCG22.24;gbkey=Gene;gene=SCG22.24;gene_biotype=protein_coding;gene_synonym=SCG22.24;locus_tag=SCO1078
NC_003888.3	RefSeq	CDS	1138342	1139391	.	+	0	ID=cds1043;Parent=gene1064;Dbxref=Genbank:NP_625372.1,GeneID:1096501;Name=NP_625372.1;Note=SCG22.24%2C probable lacI-family transcriptional regulator%2C len: 349 aa%3B similar to TR:Q9S1T0 (EMBL:AL109950) Streptomyces coelicolor lacI-family transcriptional regulator SCJ4.43c%2C 367 aa%3B fasta scores: opt: 786 z-score: 894.0 E(): 0%3B 38.5%25 identity in 353 aa overlap and to SW:GALR_ECOLI (EMBL:V00280) Escherichia coli galactose operon repressor GalR%2C 343 aa%3B fasta scores: opt: 504 z-score: 575.9 E(): 1.3e-24%3B 31.3%25 identity in 336 aa overlap. Contains Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins%2C lacI family signature. Contains also a possible helix-turn-helix motif at residues 29..50 (+4.16 SD);gbkey=CDS;gene=SCG22.24;product=LacI family transcriptional regulator;protein_id=NP_625372.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1138393	1138476	.	+	.	ID=id1257;Dbxref=GeneID:1096501;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 42.20%2C E-value 1.7e-10;gbkey=misc_feature;gene=SCG22.24
NC_003888.3	RefSeq	sequence_feature	1138405	1138461	.	+	.	ID=id1258;Dbxref=GeneID:1096501;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCG22.24
NC_003888.3	RefSeq	sequence_feature	1138567	1139280	.	+	.	ID=id1259;Dbxref=GeneID:1096501;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 90.60%2C E-value 3.2e-23;gbkey=misc_feature;gene=SCG22.24
NC_003888.3	RefSeq	ribosome_entry_site	1139465	1139469	.	+	.	ID=id1260;gbkey=RBS
NC_003888.3	RefSeq	gene	1139479	1140312	.	+	.	ID=gene1065;Dbxref=GeneID:1096502;Name=SCG22.25;gbkey=Gene;gene=SCG22.25;gene_biotype=protein_coding;gene_synonym=SCG22.25;locus_tag=SCO1079
NC_003888.3	RefSeq	CDS	1139479	1140312	.	+	0	ID=cds1044;Parent=gene1065;Dbxref=Genbank:NP_625373.1,GeneID:1096502;Name=NP_625373.1;Note=SCG22.25%2C hypothetical protein%2C len: 277 aa%3B similar to TR:CAB88921 (EMBL:AL353862) Streptomyces coelicolor oxidoreductase SCE34.18%2C 443 aa%3B fasta scores: opt: 133 z-score: 155.6 E(): 0.34%3B 28.2%25 identity in 287 aa overlap;gbkey=CDS;gene=SCG22.25;product=hypothetical protein;protein_id=NP_625373.1;transl_table=11
NC_003888.3	RefSeq	gene	1140293	1141591	.	-	.	ID=gene1066;Dbxref=GeneID:1096503;Name=SCG22.26c;gbkey=Gene;gene=SCG22.26c;gene_biotype=protein_coding;gene_synonym=SCG22.26c;locus_tag=SCO1080
NC_003888.3	RefSeq	CDS	1140293	1141591	.	-	0	ID=cds1045;Parent=gene1066;Dbxref=Genbank:NP_625374.1,GeneID:1096503;Name=NP_625374.1;Note=SCG22.26c%2C hypothetical protein%2C len: 432 aa%3B C-terminal domain similar to TR:Q9ZBK3 (EMBL:AL035161) Streptomyces coelicolor  lyase SC9C7.07c%2C 339 aa%3B fasta scores: opt: 163 z-score: 187.9 E(): 0.0054%3B 27.7%25 identity in 206 aa overlap;gbkey=CDS;gene=SCG22.26c;product=hypothetical protein;protein_id=NP_625374.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1141599	1141604	.	-	.	ID=id1261;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	1141692	1141742	.	-	.	ID=id1262;Note=29705 CACGCCGAGGCCCCC-GCGACGTCC 29278 - 29731 GGACGTCACCGGGGGCCTCGGCGTG 29755. Score 53: 23/24 (95%25) matches%2C 1 gap;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1141759	1142721	.	-	.	ID=gene1067;Dbxref=GeneID:1096504;Name=SCG22.27c;gbkey=Gene;gene=SCG22.27c;gene_biotype=protein_coding;gene_synonym=SCG22.27c;locus_tag=SCO1081
NC_003888.3	RefSeq	CDS	1141759	1142721	.	-	0	ID=cds1046;Parent=gene1067;Dbxref=Genbank:NP_625375.1,GeneID:1096504;Name=NP_625375.1;Note=SCG22.27c%2C probable electron transfer flavoprotein%2C alpha subunit%2C len: 320 aa%3B similar to SW:ETFA_PARDE (EMBL:L14864) Paracoccus denitrificans electron transfer flavoprotein%2C alpha subunit EftA%2C 307 aa%3B fasta scores: opt: 673 z-score: 707.8 E(): 6e-32%3B 44.3%25 identity in 316 aa overlap and to SW:ETFA_MYCTU (EMBL:AL021287) Mycobacterium tuberculosis electron transfer flavoprotein alpha-subunit EftA or MTV012.43c%2C 318 aa%3B fasta scores: opt: 1161 z-score: 1212.8 E(): 0%3B 59.4%25 identity in 323 aa overlap. Contains Pfam match to entry PF00766 ETF_alpha%2C Electron transfer flavoprotein alpha subunit and match to Prosite entry PS00696 Electron transfer flavoprotein alpha-subunit signature;gbkey=CDS;gene=SCG22.27c;product=electron transfer flavoprotein subunit alpha;protein_id=NP_625375.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1141867	1141947	.	-	.	ID=id1263;Dbxref=GeneID:1096504;Note=PS00696 Electron transfer flavoprotein alpha-subunit signature;gbkey=misc_feature;gene=SCG22.27c
NC_003888.3	RefSeq	sequence_feature	1141885	1142718	.	-	.	ID=id1264;Dbxref=GeneID:1096504;Note=Pfam match to entry PF00766 ETF_alpha%2C Electron transfer flavoprotein alpha subunit%2C score 255.20%2C E-value 9e-73;gbkey=misc_feature;gene=SCG22.27c
NC_003888.3	RefSeq	gene	1142777	1143565	.	-	.	ID=gene1068;Dbxref=GeneID:1096505;Name=SCG22.28c;gbkey=Gene;gene=SCG22.28c;gene_biotype=protein_coding;gene_synonym=SCG22.28c;locus_tag=SCO1082
NC_003888.3	RefSeq	CDS	1142777	1143565	.	-	0	ID=cds1047;Parent=gene1068;Dbxref=Genbank:NP_625376.1,GeneID:1096505;Name=NP_625376.1;Note=SCG22.28c%2C probable electron transfer flavoprotein%2C beta subunit%2C len: 262 aa%3B similar to SW:ETFB_MYCTU (EMBL:AL021287) Mycobacterium tuberculosis electron transfer flavoprotein%2C beta subunit FixA or MTV012.44c%2C 266 aa%3B fasta scores: opt: 860 z-score: 939.3 E(): 0%3B 52.5%25 identity in 263 aa overlap. Contains Pfam match to entry PF01012 ETF_beta%2C Electron transfer flavoprotein beta subunit;gbkey=CDS;gene=SCG22.28c;product=electron transfer flavoprotein subunit beta;protein_id=NP_625376.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1142810	1143559	.	-	.	ID=id1265;Dbxref=GeneID:1096505;Note=Pfam match to entry PF01012 ETF_beta%2C Electron transfer flavoprotein beta subunit%2C score 266.70%2C E-value 3.1e-76;gbkey=misc_feature;gene=SCG22.28c
NC_003888.3	RefSeq	ribosome_entry_site	1143572	1143576	.	-	.	ID=id1266;gbkey=RBS
NC_003888.3	RefSeq	gene	1143786	1144295	.	-	.	ID=gene1069;Dbxref=GeneID:1096506;Name=SCG22.29c;gbkey=Gene;gene=SCG22.29c;gene_biotype=protein_coding;gene_synonym=SCG22.29c;locus_tag=SCO1083
NC_003888.3	RefSeq	CDS	1143786	1144295	.	-	0	ID=cds1048;Parent=gene1069;Dbxref=Genbank:NP_625377.1,GeneID:1096506;Name=NP_625377.1;Note=SCG22.29c%2C probable flavin-dependent reductase%2C len: 169 aa%3B similar to TR:O68503 (EMBL:AF048979) Rhodococcus erythropolis NADH-dependent FMN oxydoreductase DszD%2C 192 aa%3B fasta scores: opt: 444 z-score: 517.7 E(): 2.3e-21%3B 44.6%25 identity in 168 aa overlap. Contains Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain;gbkey=CDS;gene=SCG22.29c;product=flavin-dependent reductase;protein_id=NP_625377.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1143792	1144232	.	-	.	ID=id1267;Dbxref=GeneID:1096506;Note=Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain%2C score 178.10%2C E-value 1.5e-49;gbkey=misc_feature;gene=SCG22.29c
NC_003888.3	RefSeq	gene	1144442	1144822	.	-	.	ID=gene1070;Dbxref=GeneID:1096507;Name=SCG22.30c;gbkey=Gene;gene=SCG22.30c;gene_biotype=protein_coding;gene_synonym=SCG22.30c;locus_tag=SCO1084
NC_003888.3	RefSeq	CDS	1144442	1144822	.	-	0	ID=cds1049;Parent=gene1070;Dbxref=Genbank:NP_625378.1,GeneID:1096507;Name=NP_625378.1;Note=SCG22.30c%2C possible thioredoxin%2C len: 126 aa%3B similar to TR:Q50039 (EMBL:U15182) Mycobacterium leprae ThiX%2C 172 aa%3B fasta scores: opt: 253 z-score: 318.8 E(): 2.8e-10%3B 40.6%25 identity in 101 aa overlap%2C 172 and to SW:THIO_MYCSM (EMBL:AF023161) Mycobacterium smegmatis thioredoxin TrxA%2C 112 aa%3B fasta scores: opt: 147 z-score: 193.6 E(): 0.0026%3B 28.4%25 identity in 109 aa overlap. Contains match to Prosite entry PS00194 Thioredoxin family active site;gbkey=CDS;gene=SCG22.30c;product=thioredoxin;protein_id=NP_625378.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1144640	1144696	.	-	.	ID=id1268;Dbxref=GeneID:1096507;Note=PS00194 Thioredoxin family active site;gbkey=misc_feature;gene=SCG22.30c
NC_003888.3	RefSeq	gene	1145088	1145816	.	+	.	ID=gene1071;Dbxref=GeneID:1096508;Name=2SCG4.01;gbkey=Gene;gene=2SCG4.01;gene_biotype=protein_coding;gene_synonym=2SCG4.01;locus_tag=SCO1085
NC_003888.3	RefSeq	CDS	1145088	1145816	.	+	0	ID=cds1050;Parent=gene1071;Dbxref=Genbank:NP_625379.1,GeneID:1096508;Name=NP_625379.1;Note=2SCG4.01%2C probable acyltransferase%2C len: 242 aa%3B similar to TR:O0780 (EMBL:Z97188) Mycobacterium tuberculosis acyltransferase MTCY409.14%2C 259 aa%3B fasta scores: opt: 758 z-score: 928.7 E(): 0%3B 51.7%25 identity in 234 aa overlap and to SW:PLSC_LIMDO (EMBL:X83266) Limnanthes douglasii 1-acyl-SN-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) PlsC%2C 281 aa%3B fasta scores: opt: 218 z-score: 272.2 E(): 1.1e-07%3B 31.0%25 identity in 174 aa overlap. Contains Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase;gbkey=CDS;gene=2SCG4.01;product=acyltransferase;protein_id=NP_625379.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1145172	1145702	.	+	.	ID=id1269;Dbxref=GeneID:1096508;Note=Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase%2C score 154.30%2C E-value 2e-42;gbkey=misc_feature;gene=2SCG4.01
NC_003888.3	RefSeq	gene	1145827	1146426	.	-	.	ID=gene1072;Dbxref=GeneID:1096509;Name=2SCG4.02c;gbkey=Gene;gene=2SCG4.02c;gene_biotype=protein_coding;gene_synonym=2SCG4.02c;locus_tag=SCO1086
NC_003888.3	RefSeq	CDS	1145827	1146426	.	-	0	ID=cds1051;Parent=gene1072;Dbxref=Genbank:NP_625380.1,GeneID:1096509;Name=NP_625380.1;Note=2SCG4.02c%2C hypothetical protein%2C len: 199 aa%3B similar to TR:P71843 (EMBL:Z80226) Mycobacterium tuberculosis hypothetical 26.7 kD protein MTCY369.34c%2C 242 aa%3B fasta scores: opt: 168 z-score: 213.2 E(): 0.00022%3B 29.7%25 identity in 111 aa overlap;gbkey=CDS;gene=2SCG4.02c;product=hypothetical protein;protein_id=NP_625380.1;transl_table=11
NC_003888.3	RefSeq	gene	1146486	1147556	.	-	.	ID=gene1073;Dbxref=GeneID:1096510;Name=2SCG4.03c;gbkey=Gene;gene=2SCG4.03c;gene_biotype=protein_coding;gene_synonym=2SCG4.03c;locus_tag=SCO1087
NC_003888.3	RefSeq	CDS	1146486	1147556	.	-	0	ID=cds1052;Parent=gene1073;Dbxref=Genbank:NP_625381.1,GeneID:1096510;Name=NP_625381.1;Note=2SCG4.03c%2C probable aldolase%2C len: 356 aa%3B similar to TR:O50584 (EMBL:AB001577) Pseudomonas sp. low specificity L-threonine aldolase%2C 346 aa%3B fasta scores: opt: 832 z-score: 977.3 E(): 0%3B 41.3%25 identity in 339 aa overlap and to SW:LTAA_AERJA (EMBL:D87890) Aeromonas jandaei L-allo-threonine aldolase (EC 4.1.2.-) LtaA%2C 338 aa%3B fasta scores: opt: 270 z-score: 321.1 E(): 2.1e-10%3B 26.9%25 identity in 324 aa overlap;gbkey=CDS;gene=2SCG4.03c;product=aldolase;protein_id=NP_625381.1;transl_table=11
NC_003888.3	RefSeq	gene	1147553	1148371	.	-	.	ID=gene1074;Dbxref=GeneID:1096511;Name=2SCG4.04c;gbkey=Gene;gene=2SCG4.04c;gene_biotype=protein_coding;gene_synonym=2SCG4.04c;locus_tag=SCO1088
NC_003888.3	RefSeq	CDS	1147553	1148371	.	-	0	ID=cds1053;Parent=gene1074;Dbxref=Genbank:NP_625382.1,GeneID:1096511;Name=NP_625382.1;gbkey=CDS;gene=2SCG4.04c;product=oxidoreductase;protein_id=NP_625382.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1147739	1148275	.	-	.	ID=id1270;Dbxref=GeneID:1096511;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 25.80%2C E-value 2.7e-07;gbkey=misc_feature;gene=2SCG4.04c
NC_003888.3	RefSeq	sequence_feature	1147775	1147861	.	-	.	ID=id1271;Dbxref=GeneID:1096511;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=2SCG4.04c
NC_003888.3	RefSeq	gene	1148368	1149771	.	-	.	ID=gene1075;Dbxref=GeneID:1096512;Name=2SCG4.05c;gbkey=Gene;gene=2SCG4.05c;gene_biotype=protein_coding;gene_synonym=2SCG4.05c;locus_tag=SCO1089
NC_003888.3	RefSeq	CDS	1148368	1149771	.	-	0	ID=cds1054;Parent=gene1075;Dbxref=Genbank:NP_625383.1,GeneID:1096512;Name=NP_625383.1;Note=2SCG4.05c%2C unknown%2C len: 467 aa. High content in alanine%2C asparagine and valine amino acid residues;gbkey=CDS;gene=2SCG4.05c;product=hypothetical protein;protein_id=NP_625383.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1149779	1149783	.	-	.	ID=id1272;gbkey=RBS
NC_003888.3	RefSeq	gene	1149998	1150681	.	+	.	ID=gene1076;Dbxref=GeneID:1096513;Name=2SCG4.06;gbkey=Gene;gene=2SCG4.06;gene_biotype=protein_coding;gene_synonym=2SCG4.06;locus_tag=SCO1090
NC_003888.3	RefSeq	CDS	1149998	1150681	.	+	0	ID=cds1055;Parent=gene1076;Dbxref=Genbank:NP_625384.1,GeneID:1096513;Name=NP_625384.1;Note=2SCG4.06%2C possible phosphodiesterase%2C len: 227 aa%3B similar to TR:Q9RKX8 (EMBL:AL133213) Streptomyces coelicolor  phosphodiesterase SC6D7.20c%2C 255 aa%3B fasta scores: opt: 287 z-score: 341.1 E(): 1.6e-11%3B 33.9%25 identity in 230 aa overlap and to SW:GLPQ_BACSU (EMBL:Z26522) Bacillus subtilis glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) GlpQ%2C 293 aa%3B fasta scores: opt: 268 z-score: 318.3 E(): 3e-10%3B 30.8%25 identity in 247 aa overlap;gbkey=CDS;gene=2SCG4.06;product=phosphodiesterase;protein_id=NP_625384.1;transl_table=11
NC_003888.3	RefSeq	gene	1150733	1151272	.	-	.	ID=gene1077;Dbxref=GeneID:1096514;Name=2SCG4.07c;gbkey=Gene;gene=2SCG4.07c;gene_biotype=protein_coding;gene_synonym=2SCG4.07c;locus_tag=SCO1091
NC_003888.3	RefSeq	CDS	1150733	1151272	.	-	0	ID=cds1056;Parent=gene1077;Dbxref=Genbank:NP_625385.1,GeneID:1096514;Name=NP_625385.1;Note=2SCG4.07c%2C possible acetyltransferase%2C len: 179 aa%3B similar to TR:Q9ZBJ7 (EMBL:AL035161) Streptomyces coelicolor hypothetical 19.8 kD protein SC9C7.13c%2C 179 aa%3B fasta scores: opt: 131 z-score: 171.3 E(): 0.047%3B 29.3%25 identity in 157 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=2SCG4.07c;product=acetyltransferase;protein_id=NP_625385.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1150835	1151245	.	-	.	ID=id1273;Dbxref=GeneID:1096514;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 52.90%2C E-value 7.2e-12;gbkey=misc_feature;gene=2SCG4.07c
NC_003888.3	RefSeq	ribosome_entry_site	1151280	1151284	.	-	.	ID=id1274;gbkey=RBS
NC_003888.3	RefSeq	gene	1151356	1151748	.	+	.	ID=gene1078;Dbxref=GeneID:1096515;Name=2SCG4.08;gbkey=Gene;gene=2SCG4.08;gene_biotype=protein_coding;gene_synonym=2SCG4.08;locus_tag=SCO1092
NC_003888.3	RefSeq	CDS	1151356	1151748	.	+	0	ID=cds1057;Parent=gene1078;Dbxref=Genbank:NP_625386.1,GeneID:1096515;Name=NP_625386.1;Note=2SCG4.08%2C conserved hypothetical protein%2C len: 130 aa%3B similar to TR:O06412 (EMBL:Z95558%3B) Mycobacterium tuberculosis hypothetical 14.3 kD protein MTCY25D10.25c%2C 128 aa%3B fasta scores: opt: 399 z-score: 498.2 E(): 2.9e-20%3B 48.4%25 identity in 128 aa overlap;gbkey=CDS;gene=2SCG4.08;product=hypothetical protein;protein_id=NP_625386.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1151774	1151777	.	+	.	ID=id1275;gbkey=RBS
NC_003888.3	RefSeq	gene	1151783	1152634	.	+	.	ID=gene1079;Dbxref=GeneID:1096516;Name=2SCG4.09;gbkey=Gene;gene=2SCG4.09;gene_biotype=protein_coding;gene_synonym=2SCG4.09;locus_tag=SCO1093
NC_003888.3	RefSeq	CDS	1151783	1152634	.	+	0	ID=cds1058;Parent=gene1079;Dbxref=Genbank:NP_625387.1,GeneID:1096516;Name=NP_625387.1;Note=2SCG4.09%2C possible hydroxylase%2C len: 283 aa%3B similar to TR:O50527 (EMBL:AL009204) Streptomyces coelicolor hydroxylase SC9B10.20c%2C 267 aa%3B fasta scores: opt: 534 z-score: 593.2 E(): 1.5e-25%3B 37.0%25 identity in 270 aa overlap. Contains a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=2SCG4.09;product=hydroxylase;protein_id=NP_625387.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1151813	1151815	.	+	.	ID=id1276;Dbxref=GeneID:1096516;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SCG4.09
NC_003888.3	RefSeq	ribosome_entry_site	1152789	1152793	.	+	.	ID=id1277;gbkey=RBS
NC_003888.3	RefSeq	gene	1152798	1153376	.	+	.	ID=gene1080;Dbxref=GeneID:1096517;Name=2SCG4.10;gbkey=Gene;gene=2SCG4.10;gene_biotype=protein_coding;gene_synonym=2SCG4.10;locus_tag=SCO1094
NC_003888.3	RefSeq	CDS	1152798	1153376	.	+	0	ID=cds1059;Parent=gene1080;Dbxref=Genbank:NP_625388.1,GeneID:1096517;Name=NP_625388.1;Note=2SCG4.10%2C probable tetR-family regulatory protein%2C len: 192 aa%3B similar to TR:CAB69777 (EMBL:AL137187) Streptomyces coelicolor tetR-family transcriptional regulator SC7A8.28%2C 194 aa%3B fasta scores: opt: 419 z-score: 522.7 E(): 1.3e-21%3B 39.7%25 identity in 194 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=2SCG4.10;product=TetR family transcriptional regulator;protein_id=NP_625388.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1152831	1152971	.	+	.	ID=id1278;Dbxref=GeneID:1096517;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 50.30%2C E-value 2.1e-11;gbkey=misc_feature;gene=2SCG4.10
NC_003888.3	RefSeq	ribosome_entry_site	1153479	1153483	.	+	.	ID=id1279;gbkey=RBS
NC_003888.3	RefSeq	gene	1153488	1154504	.	+	.	ID=gene1081;Dbxref=GeneID:1096518;Name=2SCG4.11;gbkey=Gene;gene=2SCG4.11;gene_biotype=protein_coding;gene_synonym=2SCG4.11;locus_tag=SCO1095
NC_003888.3	RefSeq	CDS	1153488	1154504	.	+	0	ID=cds1060;Parent=gene1081;Dbxref=Genbank:NP_625389.1,GeneID:1096518;Name=NP_625389.1;Note=2SCG4.11%2C unknown%2C len: 338 aa. Contains highly hydrophilic C-terminal region;gbkey=CDS;gene=2SCG4.11;product=hypothetical protein;protein_id=NP_625389.1;transl_table=11
NC_003888.3	RefSeq	gene	1154572	1154766	.	+	.	ID=gene1082;Dbxref=GeneID:1096519;Name=2SCG4.12;gbkey=Gene;gene=2SCG4.12;gene_biotype=protein_coding;gene_synonym=2SCG4.12;locus_tag=SCO1096
NC_003888.3	RefSeq	CDS	1154572	1154766	.	+	0	ID=cds1061;Parent=gene1082;Dbxref=Genbank:NP_625390.1,GeneID:1096519;Name=NP_625390.1;Note=2SCG4.12%2C unknown%2C len: 64 aa;gbkey=CDS;gene=2SCG4.12;product=hypothetical protein;protein_id=NP_625390.1;transl_table=11
NC_003888.3	RefSeq	gene	1154808	1155686	.	+	.	ID=gene1083;Dbxref=GeneID:1096520;Name=2SCG4.13;gbkey=Gene;gene=2SCG4.13;gene_biotype=protein_coding;gene_synonym=2SCG4.13;locus_tag=SCO1097
NC_003888.3	RefSeq	CDS	1154808	1155686	.	+	0	ID=cds1062;Parent=gene1083;Dbxref=Genbank:NP_625391.1,GeneID:1096520;Name=NP_625391.1;Note=2SCG4.13%2C probable hydrolase%2C len: 292 aa%3B similar to TR:O52866 (EMBL:AJ224332) Corynebacterium sp. soluble epoxide hydrolase (EC 3.3.2.3) Ceh%2C 285 aa%3B fasta scores: opt: 601 z-score: 728.8 E(): 0%3B 35.8%25 identity in 288 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=2SCG4.13;product=hydrolase;protein_id=NP_625391.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1154973	1155671	.	+	.	ID=id1280;Dbxref=GeneID:1096520;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 62.60%2C E-value 8.3e-15;gbkey=misc_feature;gene=2SCG4.13
NC_003888.3	RefSeq	gene	1155717	1156292	.	-	.	ID=gene1084;Dbxref=GeneID:1096521;Name=2SCG4.14c;gbkey=Gene;gene=2SCG4.14c;gene_biotype=protein_coding;gene_synonym=2SCG4.14c;locus_tag=SCO1098
NC_003888.3	RefSeq	CDS	1155717	1156292	.	-	0	ID=cds1063;Parent=gene1084;Dbxref=Genbank:NP_625392.1,GeneID:1096521;Name=NP_625392.1;Note=2SCG4.14c%2C probable MarR-family regulatory protein%2C len: 191 aa%3B similar to SW:PECS_ERWCH (EMBL:X74409) Erwinia chrysanthemi regulatory protein PecS%2C 166 aa%3B fasta scores: opt: 302 z-score: 329.2 E(): 7.5e-11%3B 34.0%25 identity in 150 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=2SCG4.14c;product=MarR family regulatory protein;protein_id=NP_625392.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1155759	1156073	.	-	.	ID=id1281;Dbxref=GeneID:1096521;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 58.20%2C E-value 1.7e-13;gbkey=misc_feature;gene=2SCG4.14c
NC_003888.3	RefSeq	gene	1156289	1158022	.	-	.	ID=gene1085;Dbxref=GeneID:1096522;Name=2SCG4.15c;gbkey=Gene;gene=2SCG4.15c;gene_biotype=protein_coding;gene_synonym=2SCG4.15c;locus_tag=SCO1099
NC_003888.3	RefSeq	CDS	1156289	1158022	.	-	0	ID=cds1064;Parent=gene1085;Dbxref=Genbank:NP_625393.1,GeneID:1096522;Name=NP_625393.1;Note=2SCG4.15c%2C possible integral membrane protein%2C len: 577 aa%3B similar to TR:O32225 (EMBL:Z99121) Bacillus subtilis YvaC protein%2C 631 aa%3B fasta scores: opt: 259 z-score: 265.7 E(): 2.6e-07%3B 26.5%25 identity in 578 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG4.15c;product=hypothetical protein;protein_id=NP_625393.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1158208	1158214	.	+	.	ID=id1282;gbkey=RBS
NC_003888.3	RefSeq	gene	1158218	1158796	.	+	.	ID=gene1086;Dbxref=GeneID:1096523;Name=2SCG4.16;gbkey=Gene;gene=2SCG4.16;gene_biotype=protein_coding;gene_synonym=2SCG4.16;locus_tag=SCO1100
NC_003888.3	RefSeq	CDS	1158218	1158796	.	+	0	ID=cds1065;Parent=gene1086;Dbxref=Genbank:NP_625394.1,GeneID:1096523;Name=NP_625394.1;Note=2SCG4.16%2C possible integral membrane protein%2C len: 192 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG4.16;product=hypothetical protein;protein_id=NP_625394.1;transl_table=11
NC_003888.3	RefSeq	gene	1158944	1159879	.	+	.	ID=gene1087;Dbxref=GeneID:1096524;Name=2SCG4.17;gbkey=Gene;gene=2SCG4.17;gene_biotype=protein_coding;gene_synonym=2SCG4.17;locus_tag=SCO1101
NC_003888.3	RefSeq	CDS	1158944	1159879	.	+	0	ID=cds1066;Parent=gene1087;Dbxref=Genbank:NP_625395.1,GeneID:1096524;Name=NP_625395.1;Note=2SCG4.17%2C possible integral membrane protein%2C len: 311 aa%3B similar to TR:Q9XAS1 (EMBL:AL078618) Streptomyces coelicolor  integral membrane protein SC10A7.04%2C 312 aa%3B fasta scores: opt: 1123 z-score: 1310.0 E(): 0%3B 56.4%25 identity in 305 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG4.17;product=hypothetical protein;protein_id=NP_625395.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1160111	1160114	.	+	.	ID=id1283;gbkey=RBS
NC_003888.3	RefSeq	gene	1160123	1160794	.	+	.	ID=gene1088;Dbxref=GeneID:1096525;Name=2SCG4.18;gbkey=Gene;gene=2SCG4.18;gene_biotype=protein_coding;gene_synonym=2SCG4.18;locus_tag=SCO1102
NC_003888.3	RefSeq	CDS	1160123	1160794	.	+	0	ID=cds1067;Parent=gene1088;Dbxref=Genbank:NP_625396.1,GeneID:1096525;Name=NP_625396.1;Note=2SCG4.18%2C possible integral membrane protein%2C len: 223 aa%3B similar to TR:Q06074 (EMBL:Z21972) Bacillus megaterium hypothetical 24.9 kD protein in cytochrome P450MEG gene 3' region%2C 216 aa%3B fasta scores: opt: 298 z-score: 353.5 E(): 3.3e-12%3B 27.5%25 identity in 207 aa overlap. Contains Pfam match to entry PF01569 PAP2%2C PAP2 superfamily. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG4.18;product=hypothetical protein;protein_id=NP_625396.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1160342	1160791	.	+	.	ID=id1284;Dbxref=GeneID:1096525;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score 80.90%2C E-value 2.5e-20;gbkey=misc_feature;gene=2SCG4.18
NC_003888.3	RefSeq	gene	1160876	1161565	.	+	.	ID=gene1089;Dbxref=GeneID:1096526;Name=2SCG4.19;gbkey=Gene;gene=2SCG4.19;gene_biotype=protein_coding;gene_synonym=2SCG4.19;locus_tag=SCO1103
NC_003888.3	RefSeq	CDS	1160876	1161565	.	+	0	ID=cds1068;Parent=gene1089;Dbxref=Genbank:NP_625397.1,GeneID:1096526;Name=NP_625397.1;Note=2SCG4.19%2C probable hydrolase%2C len: 229 aa%3B similar to SW:HAD4_BURCE (EMBL:X66249) Burkholderia cepacia 2-haloalkanoic acid dehalogenase IVa (EC 3.8.1.2) Hdl IVa%2C 230 aa%3B fasta scores: opt: 218 z-score: 257.2 E(): 7.6e-07%3B 29.8%25 identity in 205 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=2SCG4.19;product=hydrolase;protein_id=NP_625397.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1160876	1161511	.	+	.	ID=id1285;Dbxref=GeneID:1096526;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 91.80%2C E-value 1.4e-23;gbkey=misc_feature;gene=2SCG4.19
NC_003888.3	RefSeq	ribosome_entry_site	1161699	1161703	.	+	.	ID=id1286;gbkey=RBS
NC_003888.3	RefSeq	gene	1161710	1162411	.	+	.	ID=gene1090;Dbxref=GeneID:1096527;Name=2SCG4.20;gbkey=Gene;gene=2SCG4.20;gene_biotype=protein_coding;gene_synonym=2SCG4.20;locus_tag=SCO1104
NC_003888.3	RefSeq	CDS	1161710	1162411	.	+	0	ID=cds1069;Parent=gene1090;Dbxref=Genbank:NP_625398.1,GeneID:1096527;Name=NP_625398.1;Note=2SCG4.20%2C probable tetR-family transcriptional regulatory protein%2C len: 233 aa%3B similar to SW:BETI_ECOLI (EMBL:X52905) Escherichia coli regulatory protein BetI%2C 195 aa%3B fasta scores: opt: 177 z-score: 211.3 E(): 0.00027%3B 24.5%25 identity in 196 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Also contains possible helix-turn-helix at residues 36..57 (+3.64 SD);gbkey=CDS;gene=2SCG4.20;product=TetR family transcriptional regulator;protein_id=NP_625398.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1161767	1161907	.	+	.	ID=id1287;Dbxref=GeneID:1096527;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 62.80%2C E-value 7.3e-15;gbkey=misc_feature;gene=2SCG4.20
NC_003888.3	RefSeq	gene	1162399	1163901	.	-	.	ID=gene1091;Dbxref=GeneID:1096528;Name=2SCG4.21c;gbkey=Gene;gene=2SCG4.21c;gene_biotype=protein_coding;gene_synonym=2SCG4.21c;locus_tag=SCO1105
NC_003888.3	RefSeq	CDS	1162399	1163901	.	-	0	ID=cds1070;Parent=gene1091;Dbxref=Genbank:NP_625399.1,GeneID:1096528;Name=NP_625399.1;Note=2SCG4.21c%2C possible hypothetical protein%2C len: 500 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG4.21c;product=hypothetical protein;protein_id=NP_625399.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1163906	1163911	.	-	.	ID=id1288;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1164098	1164105	.	+	.	ID=id1289;gbkey=RBS
NC_003888.3	RefSeq	gene	1164110	1164766	.	+	.	ID=gene1092;Dbxref=GeneID:1096529;Name=2SCG4.22;gbkey=Gene;gene=2SCG4.22;gene_biotype=protein_coding;gene_synonym=2SCG4.22;locus_tag=SCO1106
NC_003888.3	RefSeq	CDS	1164110	1164766	.	+	0	ID=cds1071;Parent=gene1092;Dbxref=Genbank:NP_625400.1,GeneID:1096529;Name=NP_625400.1;Note=2SCG4.22%2C possible lipoprotein%2C len: 218 aa%3B similar to C-terminal region of TR:Q9RVD0 (EMBL:AE001960) Deinococcus radiodurans conserved hypothetical protein DR1099%2C 197 aa%3B fasta scores: opt: 263 z-score: 286.8 E(): 1.7e-08%3B 35.4%25 identity in 147 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG4.22;product=lipoprotein;protein_id=NP_625400.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1164161	1164193	.	+	.	ID=id1290;Dbxref=GeneID:1096529;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCG4.22
NC_003888.3	RefSeq	gene	1164809	1165264	.	-	.	ID=gene1093;Dbxref=GeneID:1096530;Name=2SCG4.23c;gbkey=Gene;gene=2SCG4.23c;gene_biotype=protein_coding;gene_synonym=2SCG4.23c;locus_tag=SCO1107
NC_003888.3	RefSeq	CDS	1164809	1165264	.	-	0	ID=cds1072;Parent=gene1093;Dbxref=Genbank:NP_625401.1,GeneID:1096530;Name=NP_625401.1;Note=2SCG4.23c%2C unknown%2C len: 151 aa;gbkey=CDS;gene=2SCG4.23c;product=hypothetical protein;protein_id=NP_625401.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1165266	1165270	.	-	.	ID=id1291;gbkey=RBS
NC_003888.3	RefSeq	gene	1165403	1165774	.	-	.	ID=gene1094;Dbxref=GeneID:1096531;Name=2SCG38.01c;gbkey=Gene;gene=2SCG38.01c;gene_biotype=protein_coding;gene_synonym=2SCG38.01c,2SCG4.24c;locus_tag=SCO1108
NC_003888.3	RefSeq	CDS	1165403	1165774	.	-	0	ID=cds1073;Parent=gene1094;Dbxref=Genbank:NP_733522.1,GeneID:1096531;Name=NP_733522.1;Note=2SCG38.01c%2C possible regulatory protein(fragment)%2C len: >106 aa%3B similar to N-terminal region of TR:CAC01635 (EMBL:AL391072) Streptomyces coelicolor regulatory protein SC9A4.08%2C 116 aa%3B fasta scores: opt: 218 z-score: 308.8 E(): 9.3e-10%3B 46.2%25 identity in 91 aa overlap~2SCG4.24c%2C hypothetical protein (fragment)%2C len: >47 aa%3B similar to TR:CAB82870 (EMBL:AJ276673) Streptomyces coelicolor hypothetical 12.1 kD protein MmyJ%2C 111 aa%3B fasta scores: opt: 166 z-score: 266.6 E(): 2.3e-07%3B 68.4%25 identity in 38 aa overlap;gbkey=CDS;gene=2SCG38.01c;product=regulatory protein;protein_id=NP_733522.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1165780	1165783	.	-	.	ID=id1292;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1165900	1165906	.	+	.	ID=id1293;gbkey=RBS
NC_003888.3	RefSeq	gene	1165916	1166995	.	+	.	ID=gene1095;Dbxref=GeneID:1096532;Name=2SCG38.02;gbkey=Gene;gene=2SCG38.02;gene_biotype=protein_coding;gene_synonym=2SCG38.02;locus_tag=SCO1109
NC_003888.3	RefSeq	CDS	1165916	1166995	.	+	0	ID=cds1074;Parent=gene1095;Dbxref=Genbank:NP_625402.1,GeneID:1096532;Name=NP_625402.1;Note=2SCG38.02%2C probable oxidoreductase%2C len: 359 aa%3B similar to SW:NEMA_ECOLI (EMBL:D86931) Escherichia coli N-ethylmaleimide reductase (EC 1.-.-.-) NemA%2C 365 aa%3B fasta scores: opt: 509 z-score: 564.1 E(): 5.6e-24%3B 32.1%25 identity in 364 aa overlap. Contains Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family;gbkey=CDS;gene=2SCG38.02;product=oxidoreductase;protein_id=NP_625402.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1165922	1166959	.	+	.	ID=id1294;Dbxref=GeneID:1096532;Note=Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family%2C score 318.10%2C E-value 1e-91;gbkey=misc_feature;gene=2SCG38.02
NC_003888.3	RefSeq	gene	1167193	1167993	.	+	.	ID=gene1096;Dbxref=GeneID:1096533;Name=2SCG38.03;gbkey=Gene;gene=2SCG38.03;gene_biotype=protein_coding;gene_synonym=2SCG38.03;locus_tag=SCO1110
NC_003888.3	RefSeq	CDS	1167193	1167993	.	+	0	ID=cds1075;Parent=gene1096;Dbxref=Genbank:NP_625403.1,GeneID:1096533;Name=NP_625403.1;Note=2SCG38.03%2C probable  lyase%2C len: 266 aa%3B similar to TR:Q04701 (EMBL:M94691) Fusarium solani pectate lyase A precursor (EC 4.2.2.2) PelA%2C 242 aa%3B fasta scores: opt: 605 z-score: 664.1 E(): 1.5e-29%3B 43.6%25 identity in 236 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG38.03;product=lyase;protein_id=NP_625403.1;transl_table=11
NC_003888.3	RefSeq	gene	1167998	1168804	.	-	.	ID=gene1097;Dbxref=GeneID:1096534;Name=2SCG38.04c;gbkey=Gene;gene=2SCG38.04c;gene_biotype=protein_coding;gene_synonym=2SCG38.04c;locus_tag=SCO1111
NC_003888.3	RefSeq	CDS	1167998	1168804	.	-	0	ID=cds1076;Parent=gene1097;Dbxref=Genbank:NP_625404.1,GeneID:1096534;Name=NP_625404.1;Note=2SCG38.04c%2C conserved hypothetical protein%2C len: 268 aa%3B similar to TR:O53782 (EMBL:AL021943) Mycobacterium tuberculosis hypothetical 26.5 kDa protein MTV040.02%2C 240 aa%3B fasta scores: opt: 735 z-score: 848.5 E(): 0%3B 51.4%25 identity in 218 aa overlap;gbkey=CDS;gene=2SCG38.04c;product=hypothetical protein;protein_id=NP_625404.1;transl_table=11
NC_003888.3	RefSeq	gene	1168853	1170556	.	+	.	ID=gene1098;Dbxref=GeneID:1096535;Name=2SCG38.05;gbkey=Gene;gene=2SCG38.05;gene_biotype=protein_coding;gene_synonym=2SCG38.05;locus_tag=SCO1112
NC_003888.3	RefSeq	CDS	1168853	1170556	.	+	0	ID=cds1077;Parent=gene1098;Dbxref=Genbank:NP_625405.1,GeneID:1096535;Name=NP_625405.1;Note=2SCG38.05%2C probable oxidoreductase%2C len: 567 aa%3B similar to SW:AIDB_ECOLI (EMBL:L20915) Escherichia coli acyl-CoA dehydrogenase%3B adaptive response AidB protein%2C 541 aa%3B fasta scores: opt: 1437 z-score: 1553.6 E(): 0%3B 45.8%25 identity in 517 aa overlap. Contains 2x Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and match to Prosite entry PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=CDS;gene=2SCG38.05;product=oxidoreductase;protein_id=NP_625405.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1169144	1169236	.	+	.	ID=id1295;Dbxref=GeneID:1096535;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 2.10%2C E-value 8.7;gbkey=misc_feature;gene=2SCG38.05
NC_003888.3	RefSeq	sequence_feature	1169435	1170232	.	+	.	ID=id1296;Dbxref=GeneID:1096535;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 224.20%2C E-value 5.9e-65;gbkey=misc_feature;gene=2SCG38.05
NC_003888.3	RefSeq	sequence_feature	1170113	1170172	.	+	.	ID=id1297;Dbxref=GeneID:1096535;Note=PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=misc_feature;gene=2SCG38.05
NC_003888.3	RefSeq	gene	1170638	1171792	.	+	.	ID=gene1099;Dbxref=GeneID:1096536;Name=2SCG38.06;gbkey=Gene;gene=2SCG38.06;gene_biotype=protein_coding;gene_synonym=2SCG38.06;locus_tag=SCO1113
NC_003888.3	RefSeq	CDS	1170638	1171792	.	+	0	ID=cds1078;Parent=gene1099;Dbxref=Genbank:NP_625406.1,GeneID:1096536;Name=NP_625406.1;Note=2SCG38.06%2C conserved hypothetical protein%2C len: 384 aa%3B similar to TR:AAG04745 (EMBL:AE004565) Pseudomonas aeruginosa hypothetical 41.0 kDa protein PA1356%2C 368 aa%3B fasta scores: opt: 714 z-score: 833.2 E(): 0%3B 36.9%25 identity in 374 aa overlap. Contains 6x Pfam matches to entry PF02012 BNR%2C BNR repeat;gbkey=CDS;gene=2SCG38.06;product=hypothetical protein;protein_id=NP_625406.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1170899	1170934	.	+	.	ID=id1298;Dbxref=GeneID:1096536;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 14.30%2C E-value 3;gbkey=misc_feature;gene=2SCG38.06
NC_003888.3	RefSeq	sequence_feature	1171058	1171093	.	+	.	ID=id1299;Dbxref=GeneID:1096536;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 9.50%2C E-value 34;gbkey=misc_feature;gene=2SCG38.06
NC_003888.3	RefSeq	sequence_feature	1171226	1171261	.	+	.	ID=id1300;Dbxref=GeneID:1096536;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 10.00%2C E-value 29;gbkey=misc_feature;gene=2SCG38.06
NC_003888.3	RefSeq	sequence_feature	1171388	1171423	.	+	.	ID=id1301;Dbxref=GeneID:1096536;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 11.80%2C E-value 16;gbkey=misc_feature;gene=2SCG38.06
NC_003888.3	RefSeq	sequence_feature	1171553	1171588	.	+	.	ID=id1302;Dbxref=GeneID:1096536;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 11.20%2C E-value 20;gbkey=misc_feature;gene=2SCG38.06
NC_003888.3	RefSeq	sequence_feature	1171703	1171738	.	+	.	ID=id1303;Dbxref=GeneID:1096536;Note=Pfam match to entry PF02012 BNR%2C BNR repeat%2C score 7.70%2C E-value 60;gbkey=misc_feature;gene=2SCG38.06
NC_003888.3	RefSeq	ribosome_entry_site	1171853	1171857	.	+	.	ID=id1304;gbkey=RBS
NC_003888.3	RefSeq	gene	1171863	1172540	.	+	.	ID=gene1100;Dbxref=GeneID:1096537;Name=2SCG38.07;gbkey=Gene;gene=2SCG38.07;gene_biotype=protein_coding;gene_synonym=2SCG38.07,ung;locus_tag=SCO1114
NC_003888.3	RefSeq	CDS	1171863	1172540	.	+	0	ID=cds1079;Parent=gene1100;Dbxref=Genbank:NP_625407.1,GeneID:1096537;Name=NP_625407.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;gene=2SCG38.07;product=uracil-DNA glycosylase;protein_id=NP_625407.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1171992	1172528	.	+	.	ID=id1305;Dbxref=GeneID:1096537;Note=Pfam match to entry PF00315 UNG%2C Uracil-DNA glycosylase%2C score 193.70%2C E-value 2.9e-54;gbkey=misc_feature;gene=2SCG38.07
NC_003888.3	RefSeq	sequence_feature	1172043	1172072	.	+	.	ID=id1306;Dbxref=GeneID:1096537;Note=PS00130 Uracil-DNA glycosylase signature;gbkey=misc_feature;gene=2SCG38.07
NC_003888.3	RefSeq	gene	1172537	1173535	.	+	.	ID=gene1101;Dbxref=GeneID:1096538;Name=2SCG38.08;gbkey=Gene;gene=2SCG38.08;gene_biotype=protein_coding;gene_synonym=2SCG38.08;locus_tag=SCO1115
NC_003888.3	RefSeq	CDS	1172537	1173535	.	+	0	ID=cds1080;Parent=gene1101;Dbxref=Genbank:NP_625408.1,GeneID:1096538;Name=NP_625408.1;Note=2SCG38.08%2C hypothetical protein%2C len: 332 aa%3B similar to TR:O50524 (EMBL:AL009204) Streptomyces coelicolor hypothetical 34.4 kDa protein SC9B10.17%2C 330 aa%3B fasta scores: opt: 263 z-score: 269.2 E(): 1.5e-07%3B 29.2%25 identity in 329 aa overlap and to TR:Q9EWI7 (EMBL:AL450223) Streptomyces coelicolor hypothetical protein SC7H9.09c%2C 332 aa%3B fasta scores: opt: 619 Z-score: 612.5 E(): 1.7e-26%3B 45.289%25 identity in 329 aa overlap;gbkey=CDS;gene=2SCG38.08;product=hypothetical protein;protein_id=NP_625408.1;transl_table=11
NC_003888.3	RefSeq	gene	1173674	1174600	.	+	.	ID=gene1102;Dbxref=GeneID:1096539;Name=2SCG38.09;gbkey=Gene;gene=2SCG38.09;gene_biotype=protein_coding;gene_synonym=2SCG38.09;locus_tag=SCO1116
NC_003888.3	RefSeq	CDS	1173674	1174600	.	+	0	ID=cds1081;Parent=gene1102;Dbxref=Genbank:NP_625409.1,GeneID:1096539;Name=NP_625409.1;Note=2SCG38.09%2C hypothetical protein%2C len: 338 aa%3B similar to TR:P71751 (EMBL:Z81368) Mycobacterium tuberculosis hypothetical 29.7 kDa protein MTCY253.28c%2C 281 aa%3B fasta scores: opt: 210 z-score: 227.0 E(): 3.4e-05%3B 29.1%25 identity in 282 aa overlap;gbkey=CDS;gene=2SCG38.09;product=hypothetical protein;protein_id=NP_625409.1;transl_table=11
NC_003888.3	RefSeq	gene	1174890	1175927	.	-	.	ID=gene1103;Dbxref=GeneID:1096540;Name=2SCG38.10c;gbkey=Gene;gene=2SCG38.10c;gene_biotype=protein_coding;gene_synonym=2SCG38.10c;locus_tag=SCO1117
NC_003888.3	RefSeq	CDS	1174890	1175927	.	-	0	ID=cds1082;Parent=gene1103;Dbxref=Genbank:NP_625410.1,GeneID:1096540;Name=NP_625410.1;Note=2SCG38.10c%2C possible hypothetical protein%2C len: 345 aa%3B similar to TR:Q9RD79 (EMBL:AL136502) Streptomyces coelicolor hypothetical 41.5 kDa protein SCF43.09%2C 411 aa%3B fasta scores: opt: 813 z-score: 857.3 E(): 0%3B 44.1%25 identity in 358 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG38.10c;product=hypothetical protein;protein_id=NP_625410.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1175935	1175938	.	-	.	ID=id1307;gbkey=RBS
NC_003888.3	RefSeq	gene	1176089	1177579	.	-	.	ID=gene1104;Dbxref=GeneID:1096541;Name=2SCG38.11c;gbkey=Gene;gene=2SCG38.11c;gene_biotype=protein_coding;gene_synonym=2SCG38.11c;locus_tag=SCO1118
NC_003888.3	RefSeq	CDS	1176089	1177579	.	-	0	ID=cds1083;Parent=gene1104;Dbxref=Genbank:NP_625411.1,GeneID:1096541;Name=NP_625411.1;Note=2SCG38.11c%2C possible integral membrane protein%2C len: 496 aa%3B low similarity to TR:AAG03843 (EMBL:AE004483) Pseudomonas aeruginosa conserved hypothetical protein PA0454%2C 733 aa%3B fasta scores: opt: 224 z-score: 245.0 E(): 3.3e-06%3B 28.0%25 identity in 300 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG38.11c;product=hypothetical protein;protein_id=NP_625411.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1177778	1177782	.	+	.	ID=id1308;gbkey=RBS
NC_003888.3	RefSeq	gene	1177797	1178273	.	+	.	ID=gene1105;Dbxref=GeneID:1096542;Name=2SCG38.12;gbkey=Gene;gene=2SCG38.12;gene_biotype=protein_coding;gene_synonym=2SCG38.12;locus_tag=SCO1119
NC_003888.3	RefSeq	CDS	1177797	1178273	.	+	0	ID=cds1084;Parent=gene1105;Dbxref=Genbank:NP_625412.1,GeneID:1096542;Name=NP_625412.1;Note=2SCG38.12%2C probable asnC-family transcriptional regulatory protein%2C len: 158 aa%3B similar to SW:PUTR_RHOCA (EMBL:X78346) Rhodobacter capsulatus proline dehydrogenase transcriptional activator PutR%2C 154 aa%3B fasta scores: opt: 245 z-score: 306.6 E(): 1.2e-09%3B 34.3%25 identity in 143 aa overlap. Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family and possible helix-turn-helix motif at residues 20..41 (+2.62 SD);gbkey=CDS;gene=2SCG38.12;product=transcription regulator AsnC;protein_id=NP_625412.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1177875	1178174	.	+	.	ID=id1309;Dbxref=GeneID:1096542;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 79.70%2C E-value 6e-20;gbkey=misc_feature;gene=2SCG38.12
NC_003888.3	RefSeq	gene	1178294	1179010	.	+	.	ID=gene1106;Dbxref=GeneID:1096543;Name=2SCG38.13;gbkey=Gene;gene=2SCG38.13;gene_biotype=protein_coding;gene_synonym=2SCG38.13;locus_tag=SCO1120
NC_003888.3	RefSeq	CDS	1178294	1179010	.	+	0	ID=cds1085;Parent=gene1106;Dbxref=Genbank:NP_625413.1,GeneID:1096543;Name=NP_625413.1;Note=2SCG38.13%2C probable hydrolase%2C len: 238 aa%3B similar to SW:GPHC_ALCEU (EMBL:M68904) Alcaligenes eutrophus phosphoglycolate phosphatase%2C chromosomal (EC 3.1.3.18) CbbZC%2C 231 aa%3B fasta scores: opt: 300 z-score: 354.5 E(): 2.7e-12%3B 32.9%25 identity in 207 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=2SCG38.13;product=hydrolase;protein_id=NP_625413.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1178327	1178878	.	+	.	ID=id1310;Dbxref=GeneID:1096543;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 159.90%2C E-value 4.4e-44;gbkey=misc_feature;gene=2SCG38.13
NC_003888.3	RefSeq	ribosome_entry_site	1179082	1179089	.	+	.	ID=id1311;gbkey=RBS
NC_003888.3	RefSeq	gene	1179094	1179834	.	+	.	ID=gene1107;Dbxref=GeneID:1096544;Name=2SCG38.14;gbkey=Gene;gene=2SCG38.14;gene_biotype=protein_coding;gene_synonym=2SCG38.14;locus_tag=SCO1121
NC_003888.3	RefSeq	CDS	1179094	1179834	.	+	0	ID=cds1086;Parent=gene1107;Dbxref=Genbank:NP_625414.1,GeneID:1096544;Name=NP_625414.1;Note=2SCG38.14%2C possible hypothetical protein%2C len: 246 aa%3B highly similar to TR:Q9XAG0 (EMBL:AL079356) Streptomyces coelicolor  hypothetical protein SC6G9.22%2C 248 aa%3B fasta scores: opt: 1111 z-score: 1110.0 E(): 0%3B 66.8%25 identity in 244 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG38.14;product=hypothetical protein;protein_id=NP_625414.1;transl_table=11
NC_003888.3	RefSeq	gene	1179956	1180792	.	-	.	ID=gene1108;Dbxref=GeneID:1096545;Name=2SCG38.15c;gbkey=Gene;gene=2SCG38.15c;gene_biotype=protein_coding;gene_synonym=2SCG38.15c;locus_tag=SCO1122
NC_003888.3	RefSeq	CDS	1179956	1180792	.	-	0	ID=cds1087;Parent=gene1108;Dbxref=Genbank:NP_625415.1,GeneID:1096545;Name=NP_625415.1;Note=2SCG38.15c%2C possible regulatory protein%2C len: 278 aa%3B similar to TR:Q9RIT6 (EMBL:AL133278) Streptomyces coelicolor  lysR-family transcriptional regulator SCM11.26%2C 303 aa%3B fasta scores: opt: 243 z-score: 243.1 E(): 4.2e-06%3B 33.9%25 identity in 168 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SCG38.15c;product=regulatory protein;protein_id=NP_625415.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1179974	1180159	.	-	.	ID=id1312;Dbxref=GeneID:1096545;Note=region with high content in glycine amino acid residues;gbkey=misc_feature;gene=2SCG38.15c
NC_003888.3	RefSeq	sequence_feature	1180067	1180090	.	-	.	ID=id1313;Dbxref=GeneID:1096545;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCG38.15c
NC_003888.3	RefSeq	gene	1180851	1181249	.	+	.	ID=gene1109;Dbxref=GeneID:1096546;Name=2SCG38.16;gbkey=Gene;gene=2SCG38.16;gene_biotype=protein_coding;gene_synonym=2SCG38.16;locus_tag=SCO1123
NC_003888.3	RefSeq	CDS	1180851	1181249	.	+	0	ID=cds1088;Parent=gene1109;Dbxref=Genbank:NP_625416.1,GeneID:1096546;Name=NP_625416.1;Note=2SCG38.16%2C unknown%2C len: 132 aa;gbkey=CDS;gene=2SCG38.16;product=hypothetical protein;protein_id=NP_625416.1;transl_table=11
NC_003888.3	RefSeq	gene	1181366	1181857	.	-	.	ID=gene1110;Dbxref=GeneID:1096547;Name=2SCG38.17c;gbkey=Gene;gene=2SCG38.17c;gene_biotype=protein_coding;gene_synonym=2SCG38.17c;locus_tag=SCO1124
NC_003888.3	RefSeq	CDS	1181366	1181857	.	-	0	ID=cds1089;Parent=gene1110;Dbxref=Genbank:NP_625417.1,GeneID:1096547;Name=NP_625417.1;Note=2SCG38.17c%2C possible integral membrane protein%2C len: 163 aa%3B similar to TR:O31623 (EMBL:Z99110) Bacillus subtilis YjcA protein%2C 118 aa%3B fasta scores: opt: 229 z-score: 294.7 E(): 5.7e-09%3B 38.2%25 identity in 110 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG38.17c;product=hypothetical protein;protein_id=NP_625417.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1181864	1181868	.	-	.	ID=id1314;gbkey=RBS
NC_003888.3	RefSeq	gene	1181900	1182421	.	-	.	ID=gene1111;Dbxref=GeneID:1096548;Name=2SCG38.18c;gbkey=Gene;gene=2SCG38.18c;gene_biotype=protein_coding;gene_synonym=2SCG38.18c;locus_tag=SCO1125
NC_003888.3	RefSeq	CDS	1181900	1182421	.	-	0	ID=cds1090;Parent=gene1111;Dbxref=Genbank:NP_625418.1,GeneID:1096548;Name=NP_625418.1;Note=2SCG38.18c%2C unknown%2C len: 173 aa;gbkey=CDS;gene=2SCG38.18c;product=hypothetical protein;protein_id=NP_625418.1;transl_table=11
NC_003888.3	RefSeq	gene	1182418	1183572	.	-	.	ID=gene1112;Dbxref=GeneID:1096549;Name=2SCG38.19c;gbkey=Gene;gene=2SCG38.19c;gene_biotype=protein_coding;gene_synonym=2SCG38.19c;locus_tag=SCO1126
NC_003888.3	RefSeq	CDS	1182418	1183572	.	-	0	ID=cds1091;Parent=gene1112;Dbxref=Genbank:NP_625419.1,GeneID:1096549;Name=NP_625419.1;Note=2SCG38.19c%2C conserved hypothetical protein%2C len: 384 aa%3B similar to TR:Q9RVF3 (EMBL:AE001958) Deinococcus radiodurans cell wall synthesis protein%2C DR1076%2C 411 aa%3B fasta scores: opt: 327 z-score: 366.3 E(): 5.8e-13%3B 30.2%25 identity in 397 aa overlap;gbkey=CDS;gene=2SCG38.19c;product=hypothetical protein;protein_id=NP_625419.1;transl_table=11
NC_003888.3	RefSeq	gene	1183673	1184611	.	+	.	ID=gene1113;Dbxref=GeneID:1096550;Name=2SCG38.20;gbkey=Gene;gene=2SCG38.20;gene_biotype=protein_coding;gene_synonym=2SCG38.20;locus_tag=SCO1127
NC_003888.3	RefSeq	CDS	1183673	1184611	.	+	0	ID=cds1092;Parent=gene1113;Dbxref=Genbank:NP_625420.1,GeneID:1096550;Name=NP_625420.1;Note=2SCG38.20%2C probable oxidoreductase%2C len: 312 aa%3B similar to SW:BDHA_RHIME (EMBL:AF080548) Rhizobium meliloti D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) BdhA%2C 258 aa%3B fasta scores: opt: 332 z-score: 358.5 E(): 1.6e-12%3B 32.7%25 identity in 223 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=2SCG38.20;product=oxidoreductase;protein_id=NP_625420.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1183871	1184413	.	+	.	ID=id1315;Dbxref=GeneID:1096550;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 171.90%2C E-value 1.1e-47;gbkey=misc_feature;gene=2SCG38.20
NC_003888.3	RefSeq	sequence_feature	1184264	1184350	.	+	.	ID=id1316;Dbxref=GeneID:1096550;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=2SCG38.20
NC_003888.3	RefSeq	ribosome_entry_site	1184615	1184618	.	+	.	ID=id1317;gbkey=RBS
NC_003888.3	RefSeq	gene	1184628	1185536	.	+	.	ID=gene1114;Dbxref=GeneID:1096551;Name=2SCG38.21;gbkey=Gene;gene=2SCG38.21;gene_biotype=protein_coding;gene_synonym=2SCG38.21;locus_tag=SCO1128
NC_003888.3	RefSeq	CDS	1184628	1185536	.	+	0	ID=cds1093;Parent=gene1114;Dbxref=Genbank:NP_625421.1,GeneID:1096551;Name=NP_625421.1;Note=2SCG38.21%2C possible integral membrane protein%2C len: 302 aa%3B similar to TR:Q9RJN5 (EMBL:AL132991) Streptomyces coelicolor  integral membrane protein SCF55.33%2C 287 aa%3B fasta scores: opt: 590 z-score: 654.2 E(): 5.4e-29%3B 42.4%25 identity in 278 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG38.21;product=hypothetical protein;protein_id=NP_625421.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1185624	1185627	.	+	.	ID=id1318;gbkey=RBS
NC_003888.3	RefSeq	gene	1185632	1186480	.	+	.	ID=gene1115;Dbxref=GeneID:1096552;Name=2SCG38.22;gbkey=Gene;gene=2SCG38.22;gene_biotype=protein_coding;gene_synonym=2SCG38.22;locus_tag=SCO1129
NC_003888.3	RefSeq	CDS	1185632	1186480	.	+	0	ID=cds1094;Parent=gene1115;Dbxref=Genbank:NP_625422.1,GeneID:1096552;Name=NP_625422.1;Note=2SCG38.22%2C probable  deacetylase%2C len: 282 aa%3B similar to SW:NODB_RHIME (EMBL:X01649) Rhizobium meliloti chitooligosaccharide deacetylase (EC 3.5.1.-) NodB%2C 217 aa%3B fasta scores: opt: 363 z-score: 383.5 E(): 6.5e-14%3B 38.5%25 identity in 195 aa overlap. Contains Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG38.22;product=deacetylase;protein_id=NP_625422.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1185797	1186237	.	+	.	ID=id1319;Dbxref=GeneID:1096552;Note=Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase%2C score 126.00%2C E-value 7e-34;gbkey=misc_feature;gene=2SCG38.22
NC_003888.3	RefSeq	repeat_region	1186379	1186450	.	+	.	ID=id1320;Dbxref=GeneID:1096552;gbkey=repeat_region;gene=2SCG38.22
NC_003888.3	RefSeq	gene	1186491	1188266	.	+	.	ID=gene1116;Dbxref=GeneID:1096553;Name=2SCG38.23;gbkey=Gene;gene=2SCG38.23;gene_biotype=protein_coding;gene_synonym=2SCG38.23;locus_tag=SCO1130
NC_003888.3	RefSeq	CDS	1186491	1188266	.	+	0	ID=cds1095;Parent=gene1116;Dbxref=Genbank:NP_625423.1,GeneID:1096553;Name=NP_625423.1;Note=2SCG38.23%2C conserved hypothetical protein%2C len: 591 aa%3B similar to TR:P71741 (EMBL:Z81368) Mycobacterium tuberculosis hypothetical 72.7 kDa protein MTCY253.18c%2C 642 aa%3B fasta scores: opt: 339 z-score: 399.9 E(): 7.9e-15%3B 29.0%25 identity in 628 aa overlap;gbkey=CDS;gene=2SCG38.23;product=hypothetical protein;protein_id=NP_625423.1;transl_table=11
NC_003888.3	RefSeq	gene	1188324	1189481	.	-	.	ID=gene1117;Dbxref=GeneID:1096554;Name=2SCG38.24c;gbkey=Gene;gene=2SCG38.24c;gene_biotype=protein_coding;gene_synonym=2SCG38.24c;locus_tag=SCO1131
NC_003888.3	RefSeq	CDS	1188324	1189481	.	-	0	ID=cds1096;Parent=gene1117;Dbxref=Genbank:NP_625424.1,GeneID:1096554;Name=NP_625424.1;Note=2SCG38.24c%2C conserved hypothetical protein%2C len: 385 aa%3B similar to TR:O53711 (EMBL:AL021931) Mycobacterium tuberculosis hypothetical 39.9 kDa protein MTV036.11c%2C 380 aa%3B fasta scores: opt: 1176 z-score: 1285.6 E(): 0%3B 56.7%25 identity in 351 aa overlap and to TR:Q9ZBN5 (EMBL:AL034492) Streptomyces coelicolor hypothetical 40.7 kDa protein SC6C5.10%2C 395 aa%3B fasta scores: opt: 1764 z-score: 1925.1 E(): 0%3B 76.9%25 identity in 351 aa overlap;gbkey=CDS;gene=2SCG38.24c;product=hypothetical protein;protein_id=NP_625424.1;transl_table=11
NC_003888.3	RefSeq	gene	1189474	1191621	.	-	.	ID=gene1118;Dbxref=GeneID:1096555;Name=2SCG38.25c;gbkey=Gene;gene=2SCG38.25c;gene_biotype=protein_coding;gene_synonym=2SCG38.25c;locus_tag=SCO1132
NC_003888.3	RefSeq	CDS	1189474	1191621	.	-	0	ID=cds1097;Parent=gene1118;Dbxref=Genbank:NP_625425.1,GeneID:1096555;Name=NP_625425.1;Note=2SCG38.25c%2C possible oxidoreductase%2C len: 715 aa%3B similar to TR:AAG05321 (EMBL:AE004619) Pseudomonas aeruginosa probable hydroxylase large subunit PA1933%2C 734 aa%3B fasta scores: opt: 1323 z-score: 1465.6 E(): 0%3B 44.2%25 identity in 737 aa overlap and to TR:CAB69663 (EMBL:AL137165) Streptomyces coelicolor oxidoreductase SCF42.01%2C 369 aa%3B fasta scores: opt: 1286 z-score: 1141.0 E(): 0%3B 55.4%25 identity in 359 aa overlap. Contains 3x Pfam matches to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus;gbkey=CDS;gene=2SCG38.25c;product=oxidoreductase;protein_id=NP_625425.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1189488	1189493	.	-	.	ID=id1321;Dbxref=GeneID:1096555;gbkey=RBS;gene=2SCG38.25c
NC_003888.3	RefSeq	sequence_feature	1189681	1189935	.	-	.	ID=id1322;Dbxref=GeneID:1096555;Note=Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score 61.90%2C E-value 2.8e-18;gbkey=misc_feature;gene=2SCG38.25c
NC_003888.3	RefSeq	sequence_feature	1190020	1190583	.	-	.	ID=id1323;Dbxref=GeneID:1096555;Note=Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score 96.70%2C E-value 8.8e-29;gbkey=misc_feature;gene=2SCG38.25c
NC_003888.3	RefSeq	sequence_feature	1190689	1191537	.	-	.	ID=id1324;Dbxref=GeneID:1096555;Note=Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score 214.90%2C E-value 1.7e-64;gbkey=misc_feature;gene=2SCG38.25c
NC_003888.3	RefSeq	gene	1191618	1192610	.	-	.	ID=gene1119;Dbxref=GeneID:1096556;Name=2SCG38.26c;gbkey=Gene;gene=2SCG38.26c;gene_biotype=protein_coding;gene_synonym=2SCG38.26c;locus_tag=SCO1133
NC_003888.3	RefSeq	CDS	1191618	1192610	.	-	0	ID=cds1098;Parent=gene1119;Dbxref=Genbank:NP_625426.1,GeneID:1096556;Name=NP_625426.1;Note=2SCG38.26c%2C probable oxidoreductase%2C molybdopterin binding subunit%2C len: 330 aa%3B similar to TR:AAG05320 (EMBL:AE004619) Pseudomonas aeruginosa probable hydroxylase molybdopterin-containing subunit PA1932%2C 329 aa%3B fasta scores: opt: 1032 z-score: 1156.3 E(): 0%3B 52.0%25 identity in 325 aa overlap and to TR:Q9RK26 (EMBL:AL132856) Streptomyces coelicolor possible oxidoreductase%2C molybdopterin binding subunit SCF15.11%2C 330 aa%3B fasta scores: opt: 1254 z-score: 1403.4 E(): 0%3B 62.0%25 identity in 326 aa overlap. Contains Pfam match to entry PF00941 dehydrog_molyb%2C Molybdopterin binding domain in dehydrogenase;gbkey=CDS;gene=2SCG38.26c;product=oxidoreductase%2C molybdopterin binding subunit;protein_id=NP_625426.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1191624	1192607	.	-	.	ID=id1325;Dbxref=GeneID:1096556;Note=Pfam match to entry PF00941 dehydrog_molyb%2C Molybdopterin binding domain in dehydrogenase%2C score -0.90%2C E-value 2.5e-08;gbkey=misc_feature;gene=2SCG38.26c
NC_003888.3	RefSeq	ribosome_entry_site	1191630	1191634	.	-	.	ID=id1326;Dbxref=GeneID:1096556;gbkey=RBS;gene=2SCG38.26c
NC_003888.3	RefSeq	gene	1192607	1193209	.	-	.	ID=gene1120;Dbxref=GeneID:1096557;Name=2SCG38.27c;gbkey=Gene;gene=2SCG38.27c;gene_biotype=protein_coding;gene_synonym=2SCG38.27c;locus_tag=SCO1134
NC_003888.3	RefSeq	CDS	1192607	1193209	.	-	0	ID=cds1099;Parent=gene1120;Dbxref=Genbank:NP_625427.1,GeneID:1096557;Name=NP_625427.1;Note=2SCG38.27c%2C probable oxidoreductase%2C iron-sulphur binding subunit%2C len: 200 aa%3B similar to TR:Q52589 (EMBL:X77931) Pseudomonas thermocarboxydovorans carbon monoxide oxygenase [cytochrome B-561]%2C small chain (EC 1.2.2.4) CutC%2C 163 aa%3B fasta scores: opt: 405 z-score: 478.3 E(): 3.4e-19%3B 45.6%25 identity in 169 aa overlap and to TR:Q9RK27 (EMBL:AL132856) Streptomyces coelicolor oxidoreductase%2C iron-sulphur binding subunit StF15.10%2C 211 aa%3B fasta scores: opt: 729 z-score: 804.0 E(): 0%3B 62.3%25 identity in 175 aa overlap. Contains Pfam matches to entries PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains and PF01799 fer2_2%2C [2Fe-2S] binding domain and matches to Prosite entries PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature and PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=CDS;gene=2SCG38.27c;product=oxidoreductase%2C iron-sulfur binding subunit;protein_id=NP_625427.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1192619	1192623	.	-	.	ID=id1327;Dbxref=GeneID:1096557;gbkey=RBS;gene=2SCG38.27c
NC_003888.3	RefSeq	sequence_feature	1192688	1192966	.	-	.	ID=id1328;Dbxref=GeneID:1096557;Note=Pfam match to entry PF01799 fer2_2%2C [2Fe-2S] binding domain%2C score 130.40%2C E-value 3.2e-35;gbkey=misc_feature;gene=2SCG38.27c
NC_003888.3	RefSeq	sequence_feature	1192850	1192885	.	-	.	ID=id1329;Dbxref=GeneID:1096557;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=2SCG38.27c
NC_003888.3	RefSeq	sequence_feature	1192988	1193176	.	-	.	ID=id1330;Dbxref=GeneID:1096557;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 38.40%2C E-value 1.6e-07;gbkey=misc_feature;gene=2SCG38.27c
NC_003888.3	RefSeq	sequence_feature	1193042	1193068	.	-	.	ID=id1331;Dbxref=GeneID:1096557;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=2SCG38.27c
NC_003888.3	RefSeq	ribosome_entry_site	1193385	1193393	.	+	.	ID=id1332;gbkey=RBS
NC_003888.3	RefSeq	gene	1193398	1193988	.	+	.	ID=gene1121;Dbxref=GeneID:1096558;Name=2SCG38.28;gbkey=Gene;gene=2SCG38.28;gene_biotype=protein_coding;gene_synonym=2SCG38.28;locus_tag=SCO1135
NC_003888.3	RefSeq	CDS	1193398	1193988	.	+	0	ID=cds1100;Parent=gene1121;Dbxref=Genbank:NP_625428.1,GeneID:1096558;Name=NP_625428.1;Note=2SCG38.28%2C probable tetR-family transcriptional regulator%2C len: 196 aa%3B highly similar to TR:Q9RJL5 (EMBL:AL121849) Streptomyces coelicolor tetR-family transcriptional regulator SCF6.16%2C 194 aa%3B fasta scores: opt: 461 z-score: 557.4 E(): 1.3e-23%3B 40.7%25 identity in 189 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 38..59 (+4.25 SD);gbkey=CDS;gene=2SCG38.28;product=TetR family transcriptional regulator;protein_id=NP_625428.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1193467	1193601	.	+	.	ID=id1333;Dbxref=GeneID:1096558;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 37.60%2C E-value 4.8e-08;gbkey=misc_feature;gene=2SCG38.28
NC_003888.3	RefSeq	gene	1193951	1194742	.	-	.	ID=gene1122;Dbxref=GeneID:1096559;Name=2SCG38.29c;gbkey=Gene;gene=2SCG38.29c;gene_biotype=protein_coding;gene_synonym=2SCG38.29c;locus_tag=SCO1136
NC_003888.3	RefSeq	CDS	1193951	1194742	.	-	0	ID=cds1101;Parent=gene1122;Dbxref=Genbank:NP_625429.1,GeneID:1096559;Name=NP_625429.1;Note=2SCG38.29c%2C probable two component system response regulator%2C len: 263 aa%3B similar to SW:DCUR_ECOLI (EMBL:U14003) Escherichia coli transcriptional regulatory protein DcuR%2C 239 aa%3B fasta scores: opt: 421 z-score: 469.7 E(): 1e-18%3B 35.0%25 identity in 226 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and possible helix-turn-helix motif at residues 201.222 (+3.87 SD);gbkey=CDS;gene=2SCG38.29c;product=two component system response regulator;protein_id=NP_625429.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1194323	1194664	.	-	.	ID=id1334;Dbxref=GeneID:1096559;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 96.80%2C E-value 4.1e-25;gbkey=misc_feature;gene=2SCG38.29c
NC_003888.3	RefSeq	gene	1194739	1196385	.	-	.	ID=gene1123;Dbxref=GeneID:1096560;Name=2SCG38.30c;gbkey=Gene;gene=2SCG38.30c;gene_biotype=protein_coding;gene_synonym=2SCG38.30c;locus_tag=SCO1137
NC_003888.3	RefSeq	CDS	1194739	1196385	.	-	0	ID=cds1102;Parent=gene1123;Dbxref=Genbank:NP_625430.1,GeneID:1096560;Name=NP_625430.1;Note=2SCG38.30c%2C probable two component system histidine kinase%2C len: 548 aa%3B similar to SW:DCUS_ECOLI (EMBL:U14003) Escherichia coli sensor protein (EC 2.7.3.-) DcuS%2C 543 aa%3B fasta scores: opt: 657 z-score: 720.4 E(): 1.1e-32%3B 27.0%25 identity in 529 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG38.30c;product=two component system histidine kinase;protein_id=NP_625430.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1194750	1194755	.	-	.	ID=id1335;Dbxref=GeneID:1096560;gbkey=RBS;gene=2SCG38.30c
NC_003888.3	RefSeq	sequence_feature	1194784	1195356	.	-	.	ID=id1336;Dbxref=GeneID:1096560;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 40.60%2C E-value 3.6e-08;gbkey=misc_feature;gene=2SCG38.30c
NC_003888.3	RefSeq	repeat_region	1196430	1196538	.	-	.	ID=id1337;Note=3x degenerate repeat: CCACCGG(T/C)CAGCCCGCCGGTCACCGCCATCC;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1196781	1197779	.	+	.	ID=gene1124;Dbxref=GeneID:1096561;Name=2SCG38.31;gbkey=Gene;gene=2SCG38.31;gene_biotype=protein_coding;gene_synonym=2SCG38.31;locus_tag=SCO1138
NC_003888.3	RefSeq	CDS	1196781	1197779	.	+	0	ID=cds1103;Parent=gene1124;Dbxref=Genbank:NP_625431.1,GeneID:1096561;Name=NP_625431.1;Note=2SCG38.31%2C possible hypothetical protein%2C len: 332 aa%3B similar to TR:AAG04143 (EMBL:AE004510) Pseudomonas aeruginosa hypothetical 34.9 kD protein PA0754%2C 327 aa%3B fasta scores: opt: 503 z-score: 536.4 E(): 2e-22%3B 29.0%25 identity in 328 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG38.31;product=hypothetical protein;protein_id=NP_625431.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1197762	1197767	.	+	.	ID=id1338;Dbxref=GeneID:1096561;gbkey=RBS;gene=2SCG38.31
NC_003888.3	RefSeq	gene	1197776	1198321	.	+	.	ID=gene1125;Dbxref=GeneID:1096562;Name=2SCG38.32;gbkey=Gene;gene=2SCG38.32;gene_biotype=protein_coding;gene_synonym=2SCG38.32;locus_tag=SCO1139
NC_003888.3	RefSeq	CDS	1197776	1198321	.	+	0	ID=cds1104;Parent=gene1125;Dbxref=Genbank:NP_625432.1,GeneID:1096562;Name=NP_625432.1;Note=2SCG38.32%2C possible integral membrane protein%2C len: 181 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG38.32;product=hypothetical protein;protein_id=NP_625432.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1198310	1198313	.	+	.	ID=id1339;Dbxref=GeneID:1096562;gbkey=RBS;gene=2SCG38.32
NC_003888.3	RefSeq	gene	1198323	1199822	.	+	.	ID=gene1126;Dbxref=GeneID:1096563;Name=2SCG38.33;gbkey=Gene;gene=2SCG38.33;gene_biotype=protein_coding;gene_synonym=2SCG38.33;locus_tag=SCO1140
NC_003888.3	RefSeq	CDS	1198323	1199822	.	+	0	ID=cds1105;Parent=gene1126;Dbxref=Genbank:NP_625433.1,GeneID:1096563;Name=NP_625433.1;Note=2SCG38.33%2C possible integral membrane protein%2C len: 499 aa%3B similar to SW:YZ2R_AGRVI (EMBL:U32375) Agrobacterium vitis hypothetical 52.8 kDa protein%2C 502 aa%3B fasta scores: opt: 1419 z-score: 1523.5 E(): 0%3B 44.1%25 identity in 479 aa overlap. Contains Pfam match to entry PF01970 DUF112%2C Integral membrane protein DUF112. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG38.33;product=hypothetical protein;protein_id=NP_625433.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1198377	1199642	.	+	.	ID=id1340;Dbxref=GeneID:1096563;Note=Pfam match to entry PF01970 DUF112%2C Integral membrane protein DUF112%2C score 168.20%2C E-value 1.4e-46;gbkey=misc_feature;gene=2SCG38.33
NC_003888.3	RefSeq	gene	1199889	1200311	.	-	.	ID=gene1127;Dbxref=GeneID:1096564;Name=2SCG38.34c;gbkey=Gene;gene=2SCG38.34c;gene_biotype=protein_coding;gene_synonym=2SCG38.34c;locus_tag=SCO1141
NC_003888.3	RefSeq	CDS	1199889	1200311	.	-	0	ID=cds1106;Parent=gene1127;Dbxref=Genbank:NP_625434.1,GeneID:1096564;Name=NP_625434.1;Note=2SCG38.34c%2C conserved hypothetical protein%2C len: 140 aa%3B similar to SW:YP56_MYCTU (EMBL:Z77250) Mycobacterium tuberculosis hypothetical 13.9 kDa protein MTCY9C4.12%2C 129 aa%3B fasta scores: opt: 487 z-score: 626.4 E(): 1.9e-27%3B 61.2%25 identity in 121 aa overlap. Contains Pfam match to entry PF01894 UPF0047%2C Uncharacterised protein family UPF0047;gbkey=CDS;gene=2SCG38.34c;product=hypothetical protein;protein_id=NP_625434.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1199895	1200254	.	-	.	ID=id1341;Dbxref=GeneID:1096564;Note=Pfam match to entry PF01894 UPF0047%2C Uncharacterised protein family UPF0047%2C score 114.90%2C E-value 1.5e-30;gbkey=misc_feature;gene=2SCG38.34c
NC_003888.3	RefSeq	gene	1200394	1201473	.	+	.	ID=gene1128;Dbxref=GeneID:1096565;Name=2SCG38.35;gbkey=Gene;gene=2SCG38.35;gene_biotype=protein_coding;gene_synonym=2SCG38.35;locus_tag=SCO1142
NC_003888.3	RefSeq	CDS	1200394	1201473	.	+	0	ID=cds1107;Parent=gene1128;Dbxref=Genbank:NP_625435.1,GeneID:1096565;Name=NP_625435.1;Note=2SCG38.35%2C possible oxidoreductase%2C len: 359 aa%3B similar to TR:Q9X8X9 (EMBL:AL078610) Streptomyces coelicolor oxidoreductase SCH35.27%2C 406 aa%3B fasta scores: opt: 670 z-score: 758.0 E(): 0%3B 50.6%25 identity in 235 aa overlap. Contains Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like;gbkey=CDS;gene=2SCG38.35;product=oxidoreductase;protein_id=NP_625435.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1200418	1201470	.	+	.	ID=id1342;Dbxref=GeneID:1096565;Note=Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like%2C score -338.30%2C E-value 0.00023;gbkey=misc_feature;gene=2SCG38.35
NC_003888.3	RefSeq	gene	1201486	1202247	.	-	.	ID=gene1129;Dbxref=GeneID:1096566;Name=2SCG38.36c;gbkey=Gene;gene=2SCG38.36c;gene_biotype=protein_coding;gene_synonym=2SCG38.36c;locus_tag=SCO1143
NC_003888.3	RefSeq	CDS	1201486	1202247	.	-	0	ID=cds1108;Parent=gene1129;Dbxref=Genbank:NP_625436.1,GeneID:1096566;Name=NP_625436.1;Note=2SCG38.36c%2C conserved hypothetical protein%2C len: 253 aa%3B similar to TR:O66972 (EMBL:AE000707) Aquifex aeolicus hypothetical 38.3 kDa protein AQ_775%2C 326 aa%3B fasta scores: opt: 376 z-score: 435.0 E(): 8.8e-17%3B 32.8%25 identity in 235 aa overlap;gbkey=CDS;gene=2SCG38.36c;product=hypothetical protein;protein_id=NP_625436.1;transl_table=11
NC_003888.3	RefSeq	gene	1202480	1204282	.	-	.	ID=gene1130;Dbxref=GeneID:1096567;Name=2SCG38.37c;gbkey=Gene;gene=2SCG38.37c;gene_biotype=protein_coding;gene_synonym=2SCG38.37c;locus_tag=SCO1144
NC_003888.3	RefSeq	CDS	1202480	1204282	.	-	0	ID=cds1109;Parent=gene1130;Dbxref=Genbank:NP_625437.1,GeneID:1096567;Name=NP_625437.1;Note=2SCG38.37c%2C possible ABC transporter ATP-binding protein%2C len: 600 aa%3B similar to TR:P71082 (EMBL:Z82044) Bacillus subtilis unidentified transporter-ATP binding YgaD%2C 589 aa%3B fasta scores: opt: 1229 z-score: 1240.6 E(): 0%3B 34.2%25 identity in 576 aa overlap. Contains Pfam matches to entries PF00664 ABC_membrane%2C ABC transporter transmembrane region and PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG38.37c;product=ABC transporter ATP-binding protein;protein_id=NP_625437.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1202579	1203133	.	-	.	ID=id1343;Dbxref=GeneID:1096567;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 199.70%2C E-value 4.6e-56;gbkey=misc_feature;gene=2SCG38.37c
NC_003888.3	RefSeq	sequence_feature	1202756	1202800	.	-	.	ID=id1344;Dbxref=GeneID:1096567;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SCG38.37c
NC_003888.3	RefSeq	sequence_feature	1203089	1203112	.	-	.	ID=id1345;Dbxref=GeneID:1096567;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCG38.37c
NC_003888.3	RefSeq	sequence_feature	1203350	1204177	.	-	.	ID=id1346;Dbxref=GeneID:1096567;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 98.80%2C E-value 1.1e-25;gbkey=misc_feature;gene=2SCG38.37c
NC_003888.3	RefSeq	ribosome_entry_site	1204286	1204291	.	-	.	ID=id1347;gbkey=RBS
NC_003888.3	RefSeq	gene	1204428	1204889	.	+	.	ID=gene1131;Dbxref=GeneID:1096568;Name=2SCG38.38;gbkey=Gene;gene=2SCG38.38;gene_biotype=protein_coding;gene_synonym=2SCG38.38;locus_tag=SCO1145
NC_003888.3	RefSeq	CDS	1204428	1204889	.	+	0	ID=cds1110;Parent=gene1131;Dbxref=Genbank:NP_625438.1,GeneID:1096568;Name=NP_625438.1;Note=2SCG38.38%2C possible marR-family regulator%2C len: 153 aa%3B similar to TR:Q9RDN9 (EMBL:AL133423) Streptomyces coelicolor  marR-family transcriptional regulator SC4A7.26%2C 151 aa%3B fasta scores: opt: 200 z-score: 252.2 E(): 1.3e-06%3B 36.1%25 identity in 147 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=2SCG38.38;product=MarR family regulatory protein;protein_id=NP_625438.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1204533	1204847	.	+	.	ID=id1348;Dbxref=GeneID:1096568;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 92.80%2C E-value 6.9e-24;gbkey=misc_feature;gene=2SCG38.38
NC_003888.3	RefSeq	gene	1204911	1205669	.	-	.	ID=gene1132;Dbxref=GeneID:1096569;Name=2SCG38.39c;gbkey=Gene;gene=2SCG38.39c;gene_biotype=protein_coding;gene_synonym=2SCG38.39c;locus_tag=SCO1146
NC_003888.3	RefSeq	CDS	1204911	1205669	.	-	0	ID=cds1111;Parent=gene1132;Dbxref=Genbank:NP_625439.1,GeneID:1096569;Name=NP_625439.1;Note=2SCG38.39c%2C possible lipoprotein%2C len: 252 aa%3B similar to TR:Q9RK82 (EMBL:AL132662) Streptomyces coelicolor hypothetical 26.4 kDa protein SCF11.08%2C 250 aa%3B fasta scores: opt: 645 z-score: 660.7 E(): 2.4e-29%3B 42.1%25 identity in 247 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG38.39c;product=lipoprotein;protein_id=NP_625439.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1205586	1205618	.	-	.	ID=id1349;Dbxref=GeneID:1096569;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCG38.39c
NC_003888.3	RefSeq	gene	1205898	1207775	.	+	.	ID=gene1133;Dbxref=GeneID:1096570;Name=2SCG38.40;gbkey=Gene;gene=2SCG38.40;gene_biotype=protein_coding;gene_synonym=2SCG38.40,SCG8A.01;locus_tag=SCO1147
NC_003888.3	RefSeq	CDS	1205898	1207775	.	+	0	ID=cds1112;Parent=gene1133;Dbxref=Genbank:NP_733523.1,GeneID:1096570;Name=NP_733523.1;Note=2SCG38.40%2C probable ABC transporter transmembrane protein (fragment)%2C len: >35 aa~SCG8A.01%2C partial CDS%2C probable ABC transporter transmembrane subunit%2C len: >623aa%3B similar to many eg. TR:O87312 (EMBL:AF027770) FxtA iron sequestration protein from Mycobacterium smegmatis (574 aa) fasta scores%3B opt: 794%2C z-score: 866.3%2C E(): 0%2C 35.2%25 identity in 514 aa overlap. Contains Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite match to PS00211 ABC transporters family signature. Also contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SCG38.40;product=ABC transporter transmembrane subunit;protein_id=NP_733523.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1206006	1206806	.	+	.	ID=id1350;Dbxref=GeneID:1096570;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 67.60%2C E-value 2.6e-16;gbkey=misc_feature;gene=2SCG38.40
NC_003888.3	RefSeq	sequence_feature	1206975	1207544	.	+	.	ID=id1351;Dbxref=GeneID:1096570;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 74.20%2C E-value 2.8e-18;gbkey=misc_feature;gene=2SCG38.40
NC_003888.3	RefSeq	sequence_feature	1207323	1207367	.	+	.	ID=id1352;Dbxref=GeneID:1096570;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SCG38.40
NC_003888.3	RefSeq	ribosome_entry_site	1207762	1207766	.	+	.	ID=id1353;Dbxref=GeneID:1096570;gbkey=RBS;gene=2SCG38.40
NC_003888.3	RefSeq	gene	1207772	1209553	.	+	.	ID=gene1134;Dbxref=GeneID:1096571;Name=SCG8A.02;gbkey=Gene;gene=SCG8A.02;gene_biotype=protein_coding;gene_synonym=SCG8A.02;locus_tag=SCO1148
NC_003888.3	RefSeq	CDS	1207772	1209553	.	+	0	ID=cds1113;Parent=gene1134;Dbxref=Genbank:NP_625440.1,GeneID:1096571;Name=NP_625440.1;Note=SCG8A.02%2C probable ABC transporter%2C len: 593aa%3B similar to many eg. TR:CAB76002 (EMBL:AL157916) ABC transporter from Streptomyces coelicolor (583 aa) fasta scores%3B opt: 1624%2C z-score: 1736.4%2C E(): 0%2C 46.8%25 identity in 575 aa overlap. Contains Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCG8A.02;product=ABC transporter;protein_id=NP_625440.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1207901	1208713	.	+	.	ID=id1354;Dbxref=GeneID:1096571;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 83.70%2C E-value 3.8e-21;gbkey=misc_feature;gene=SCG8A.02
NC_003888.3	RefSeq	sequence_feature	1208915	1209469	.	+	.	ID=id1355;Dbxref=GeneID:1096571;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 146.40%2C E-value 5e-40;gbkey=misc_feature;gene=SCG8A.02
NC_003888.3	RefSeq	sequence_feature	1208936	1208959	.	+	.	ID=id1356;Dbxref=GeneID:1096571;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCG8A.02
NC_003888.3	RefSeq	ribosome_entry_site	1209778	1209782	.	+	.	ID=id1357;gbkey=RBS
NC_003888.3	RefSeq	gene	1209788	1210258	.	+	.	ID=gene1135;Dbxref=GeneID:1096572;Name=SCG8A.03;gbkey=Gene;gene=SCG8A.03;gene_biotype=protein_coding;gene_synonym=SCG8A.03;locus_tag=SCO1149
NC_003888.3	RefSeq	CDS	1209788	1210258	.	+	0	ID=cds1114;Parent=gene1135;Dbxref=Genbank:NP_625441.1,GeneID:1096572;Name=NP_625441.1;Note=SCG8A.03%2C unknown%2C len: 156aa%3B strongly similar to another hypothetical protein from Streptomyces coelicolor TR:CAB69691 (EMBL:AL137165) (158 aa) fasta scores%3B opt: 570%2C z-score: 640.3%2C E(): 3.2e-28%2C 59.5%25 identity in 153 aa overlap. Hydrophilic;gbkey=CDS;gene=SCG8A.03;product=hypothetical protein;protein_id=NP_625441.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1210312	1210316	.	+	.	ID=id1358;gbkey=RBS
NC_003888.3	RefSeq	gene	1210322	1210594	.	+	.	ID=gene1136;Dbxref=GeneID:1096573;Name=rpmE2;gbkey=Gene;gene=rpmE2;gene_biotype=protein_coding;gene_synonym=SCG8A.04;locus_tag=SCO1150
NC_003888.3	RefSeq	CDS	1210322	1210594	.	+	0	ID=cds1115;Parent=gene1136;Dbxref=Genbank:NP_625442.1,GeneID:1096573;Name=NP_625442.1;Note=RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE2;product=50S ribosomal protein L31;protein_id=NP_625442.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1210322	1210564	.	+	.	ID=id1359;Dbxref=GeneID:1096573;Note=Pfam match to entry PF01197 Ribosomal_L31%2C Ribosomal protein L31%2C score 60.50%2C E-value 3.5e-14;gbkey=misc_feature;gene=rpmE2
NC_003888.3	RefSeq	sequence_feature	1210370	1210393	.	+	.	ID=id1360;Dbxref=GeneID:1096573;Note=PS00030 Eukaryotic RNA-binding region RNP-1 signature;gbkey=misc_feature;gene=rpmE2
NC_003888.3	RefSeq	sequence_feature	1210484	1210540	.	+	.	ID=id1361;Dbxref=GeneID:1096573;Note=PS01143 Ribosomal protein L31 signature;gbkey=misc_feature;gene=rpmE2
NC_003888.3	RefSeq	gene	1210615	1211409	.	-	.	ID=gene1137;Dbxref=GeneID:1096574;Name=SCG8A.05c;gbkey=Gene;gene=SCG8A.05c;gene_biotype=protein_coding;gene_synonym=SCG8A.05c;locus_tag=SCO1151
NC_003888.3	RefSeq	CDS	1210615	1211409	.	-	0	ID=cds1116;Parent=gene1137;Dbxref=Genbank:NP_625443.1,GeneID:1096574;Name=NP_625443.1;Note=SCG8A.05c%2C possible integral membrane protein%2C len: 90aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCG8A.05c;product=hypothetical protein;protein_id=NP_625443.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1211419	1211423	.	-	.	ID=id1362;gbkey=RBS
NC_003888.3	RefSeq	gene	1211504	1214068	.	+	.	ID=gene1138;Dbxref=GeneID:1096575;Name=SCG8A.06;gbkey=Gene;gene=SCG8A.06;gene_biotype=protein_coding;gene_synonym=SCG8A.06;locus_tag=SCO1152
NC_003888.3	RefSeq	CDS	1211504	1214068	.	+	0	ID=cds1117;Parent=gene1138;Dbxref=Genbank:NP_625444.1,GeneID:1096575;Name=NP_625444.1;Note=SCG8A.06%2C possible helicase%2C len: 854 aa%3B similar in regions to many eg. TR:CAB59484 (EMBL:AL132648) helicase from Streptomyces coelicolor (950 aa) fasta scores%3B opt: 417%2C z-score: 463.2%2C E(): 2.3e-18%2C 26.5%25 identity in 755 aa overlap and SW:P47047 (MTR4_YEAST) ATP-dependent RNA helicase DOB1 from Saccharomyces cerevisiae (Baker's yeast) (1073 aa) fasta scores%3B opt: 335%2C z-score: 370.4%2C E(): 3.5e-13%2C 25.1%25 identity in 650 aa overlap. Contains Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase.;gbkey=CDS;gene=SCG8A.06;product=helicase;protein_id=NP_625444.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1211615	1212190	.	+	.	ID=id1363;Dbxref=GeneID:1096575;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 69.50%2C E-value 4.5e-21;gbkey=misc_feature;gene=SCG8A.06
NC_003888.3	RefSeq	ribosome_entry_site	1214073	1214077	.	+	.	ID=id1364;gbkey=RBS
NC_003888.3	RefSeq	gene	1214088	1214954	.	+	.	ID=gene1139;Dbxref=GeneID:1096576;Name=SCG8A.07;gbkey=Gene;gene=SCG8A.07;gene_biotype=protein_coding;gene_synonym=SCG8A.07;locus_tag=SCO1153
NC_003888.3	RefSeq	CDS	1214088	1214954	.	+	0	ID=cds1118;Parent=gene1139;Dbxref=Genbank:NP_625445.1,GeneID:1096576;Name=NP_625445.1;Note=SCG8A.07%2C tesB%2C acyl-CoA thioesterase II%2C len: 288 aa%3B similar to many e.g. SW:P23911 (TESB_ECOLI) TesB%2C acyl-CoA thioesterase II from Escherichia coli (285 aa) fasta scores%3B opt: 758%2C z-score: 852.2%2C E(): 0%2C 44.1%25 identity in 286 aa overlap and SCC105.04c from Streptomyces coelicolor (290 aa) fasta scores%3B opt: 1004%2C z-score: 1023.6%2C E(): 0%2C 57.0%25 identity in 291 aa overlap.;gbkey=CDS;gene=SCG8A.07;product=acyl-CoA thioesterase II;protein_id=NP_625445.1;transl_table=11
NC_003888.3	RefSeq	gene	1214956	1215927	.	-	.	ID=gene1140;Dbxref=GeneID:1096577;Name=SCG8A.08c;gbkey=Gene;gene=SCG8A.08c;gene_biotype=protein_coding;gene_synonym=SCG8A.08c;locus_tag=SCO1154
NC_003888.3	RefSeq	CDS	1214956	1215927	.	-	0	ID=cds1119;Parent=gene1140;Dbxref=Genbank:NP_625446.1,GeneID:1096577;Name=NP_625446.1;Note=SCG8A.08c%2C unknown%2C len: 323aa;gbkey=CDS;gene=SCG8A.08c;product=hypothetical protein;protein_id=NP_625446.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1215935	1215938	.	-	.	ID=id1365;gbkey=RBS
NC_003888.3	RefSeq	gene	1216065	1216478	.	-	.	ID=gene1141;Dbxref=GeneID:1096578;Name=SCG8A.09c;gbkey=Gene;gene=SCG8A.09c;gene_biotype=protein_coding;gene_synonym=SCG8A.09c;locus_tag=SCO1155
NC_003888.3	RefSeq	CDS	1216065	1216478	.	-	0	ID=cds1120;Parent=gene1141;Dbxref=Genbank:NP_625447.1,GeneID:1096578;Name=NP_625447.1;Note=SCG8A.09c%2C conserved hypothetical protein%2C len: 137aa%3B strongly similar to many from Streptomyces coelicolor eg. TR:Q9X835 (EMBL:AL049727) hypothetical 14.4 kD protein (139 aa) fasta scores%3B opt: 366%2C z-score: 458.5%2C E(): 4.3e-18%2C 48.0%25 identity in 127 aa overlap. Also strongly similar to neighbouring CDS SCG8A.13c. Contains Pfam match to entry PF01860 DUF42%2C Protein of unknown function;gbkey=CDS;gene=SCG8A.09c;product=hypothetical protein;protein_id=NP_625447.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1216113	1216436	.	-	.	ID=id1366;Dbxref=GeneID:1096578;Note=Pfam match to entry PF01860 DUF42%2C Protein of unknown function%2C score 3.60%2C E-value 0.00052;gbkey=misc_feature;gene=SCG8A.09c
NC_003888.3	RefSeq	repeat_region	1216119	1216459	.	-	.	ID=id1367;Dbxref=GeneID:1096578;Note=Corresponds to duplication of CDSs 09c and 13c.;gbkey=repeat_region;gene=SCG8A.09c
NC_003888.3	RefSeq	ribosome_entry_site	1216487	1216490	.	-	.	ID=id1368;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1216569	1216575	.	+	.	ID=id1369;gbkey=RBS
NC_003888.3	RefSeq	gene	1216584	1217012	.	+	.	ID=gene1142;Dbxref=GeneID:1096579;Name=SCG8A.10;gbkey=Gene;gene=SCG8A.10;gene_biotype=protein_coding;gene_synonym=SCG8A.10;locus_tag=SCO1156
NC_003888.3	RefSeq	CDS	1216584	1217012	.	+	0	ID=cds1121;Parent=gene1142;Dbxref=Genbank:NP_625448.1,GeneID:1096579;Name=NP_625448.1;Note=SCG8A.10%2C conserved hypothetical protein%2C len: 142aa%3B similar to many eg. TR:O52559 (EMBL:AF040570) hypothetical protein from Amycolatopsis mediterranei (166 aa) fasta scores%3B opt: 222%2C z-score: 288.8%2C E(): 1.2e-08%2C 31.6%25 identity in 136 aa overlap.;gbkey=CDS;gene=SCG8A.10;product=hypothetical protein;protein_id=NP_625448.1;transl_table=11
NC_003888.3	RefSeq	gene	1217041	1217655	.	-	.	ID=gene1143;Dbxref=GeneID:1096580;Name=cvnD3;gbkey=Gene;gene=cvnD3;gene_biotype=protein_coding;gene_synonym=cvnD3,SCG8A.11c;locus_tag=SCO1157
NC_003888.3	RefSeq	CDS	1217041	1217655	.	-	0	ID=cds1122;Parent=gene1143;Dbxref=Genbank:NP_625449.1,GeneID:1096580;Name=NP_625449.1;Note=SCG8A.11c%2C cvnD3%2C possible ATP/GTP binding protein (conserved)%2C len: 204aa%3B strongly similar to many from Streptomyces coelicolor eg. TR:O86519 (EMBL:AL031124) ATP/GTP binding protein (174 aa) fasta scores%3B opt: 695%2C z-score: 846.0%2C E(): 0%2C 61.3%25 identity in 168 aa overlap. Also similar to others eg. TR:O67698 (EMBL:AE000759) hypothetical protein from Aquifex aeolicus (186 aa) fasta scores%3B opt: 341%2C z-score: 420.7%2C E(): 5.5e-16%2C 37.1%25 identity in 175 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=cvnD3;product=ATP/GTP binding protein;protein_id=NP_625449.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1217554	1217577	.	-	.	ID=id1370;Dbxref=GeneID:1096580;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD3
NC_003888.3	RefSeq	gene	1217724	1218137	.	-	.	ID=gene1144;Dbxref=GeneID:1096581;Name=cvnC3;gbkey=Gene;gene=cvnC3;gene_biotype=protein_coding;gene_synonym=cvnC3,SCG8A.12c;locus_tag=SCO1158
NC_003888.3	RefSeq	CDS	1217724	1218137	.	-	0	ID=cds1123;Parent=gene1144;Dbxref=Genbank:NP_625450.1,GeneID:1096581;Name=NP_625450.1;Note=SCG8A.12c%2C cvnC3%2C hypothetical protein%2C len: 137 aa%3B strongly similar to many from Streptomyces coelicolor eg. TR:O86523 (EMBL:AL031124) hypothetical protein (132 aa) fasta scores%3B opt: 284%2C z-score: 351.0%2C E(): 4.2e-12%2C 42.6%25 identity in 129 aa overlap;gbkey=CDS;gene=cvnC3;product=hypothetical protein;protein_id=NP_625450.1;transl_table=11
NC_003888.3	RefSeq	gene	1218156	1218593	.	-	.	ID=gene1145;Dbxref=GeneID:1096582;Name=cvnB3;gbkey=Gene;gene=cvnB3;gene_biotype=protein_coding;gene_synonym=cvnB3,SCG8A.13c;locus_tag=SCO1159
NC_003888.3	RefSeq	CDS	1218156	1218593	.	-	0	ID=cds1124;Parent=gene1145;Dbxref=Genbank:NP_625451.1,GeneID:1096582;Name=NP_625451.1;Note=SCG8A.13c%2C cvnB3%2C hypothetical protein%2C len: 145 aa%3B strongly similar to many from Streptomyces coelicolor e.g. TR:Q9X835 (EMBL:AL049727) hypothetical 14.4 kD protein (139 aa) fasta scores%3B opt: 412%2C z-score: 512.5%2C E(): 4.2e-21%2C 52.8%25 identity in 127 aa overlap. Also strongly similar to neighbouring CDS SCG8A.09c. Contains Pfam match to entry PF01860 DUF42%2C Protein of unknown function;gbkey=CDS;gene=cvnB3;product=hypothetical protein;protein_id=NP_625451.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1218201	1218524	.	-	.	ID=id1371;Dbxref=GeneID:1096582;Note=Pfam match to entry PF01860 DUF42%2C Protein of unknown function%2C score 9.60%2C E-value 0.00016;gbkey=misc_feature;gene=cvnB3
NC_003888.3	RefSeq	repeat_region	1218207	1218547	.	-	.	ID=id1372;Dbxref=GeneID:1096582;Note=Corresponds to duplication of CDSs 09c and 13c.;gbkey=repeat_region;gene=cvnB3
NC_003888.3	RefSeq	gene	1218590	1221178	.	-	.	ID=gene1146;Dbxref=GeneID:1096583;Name=cvnA3;gbkey=Gene;gene=cvnA3;gene_biotype=protein_coding;gene_synonym=cvnA3,SCG8A.14c;locus_tag=SCO1160
NC_003888.3	RefSeq	CDS	1218590	1221178	.	-	0	ID=cds1125;Parent=gene1146;Dbxref=Genbank:NP_625452.1,GeneID:1096583;Name=NP_625452.1;Note=SCG8A.14c%2C cvnA3%2C possible membrane protein%2C len: 862 aa%3B similar to many from Streptomyces coelicolor e.g. TR:Q9X836 (EMBL:AL049727) large hypothetical protein (877 aa) fasta scores%3B opt: 1248%2C z-score: 1146.3%2C E(): 0%2C 34.7%25 identity in 836 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=cvnA3;product=hypothetical protein;protein_id=NP_625452.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1218601	1218605	.	-	.	ID=id1373;Dbxref=GeneID:1096583;gbkey=RBS;gene=cvnA3
NC_003888.3	RefSeq	ribosome_entry_site	1221181	1221186	.	-	.	ID=id1374;gbkey=RBS
NC_003888.3	RefSeq	gene	1221241	1221975	.	-	.	ID=gene1147;Dbxref=GeneID:1096584;Name=SCG8A.15c;gbkey=Gene;gene=SCG8A.15c;gene_biotype=protein_coding;gene_synonym=SCG8A.15c;locus_tag=SCO1161
NC_003888.3	RefSeq	CDS	1221241	1221975	.	-	0	ID=cds1126;Parent=gene1147;Dbxref=Genbank:NP_625453.1,GeneID:1096584;Name=NP_625453.1;Note=SCG8A.15c%2C probable integral membrane protein%2C len: 244aa%3B N-terminal region similar to that of TR:CAB76246 (EMBL:X82447) CoxC protein from Pseudomonas carboxydovorans (402 aa) fasta scores%3B opt: 387%2C z-score: 455.6%2C E(): 6.2e-18%2C 34.6%25 identity in 243 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCG8A.15c;product=hypothetical protein;protein_id=NP_625453.1;transl_table=11
NC_003888.3	RefSeq	gene	1222188	1222787	.	+	.	ID=gene1148;Dbxref=GeneID:1096585;Name=SCG8A.16;gbkey=Gene;gene=SCG8A.16;gene_biotype=protein_coding;gene_synonym=SCG8A.16;locus_tag=SCO1162
NC_003888.3	RefSeq	CDS	1222188	1222787	.	+	0	ID=cds1127;Parent=gene1148;Dbxref=Genbank:NP_625454.1,GeneID:1096585;Name=NP_625454.1;Note=SCG8A.16%2C possible methyltransferase%2C len: 199 aa%3B similar to TR:Q55214 (EMBL:L35154) aklanonic acid methyltransferase from Streptomyces sp. (220 aa) fasta scores%3B opt: 228%2C z-score: 264.1%2C E(): 2.9e-07%2C 34.1%25 identity in 123 aa overlap.;gbkey=CDS;gene=SCG8A.16;product=methyltransferase;protein_id=NP_625454.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1223209	1223227	.	-	.	ID=id1375;Note=part of inverted repeat%2C complement(18908..18926);gbkey=repeat_region
NC_003888.3	RefSeq	gene	1223235	1224134	.	-	.	ID=gene1149;Dbxref=GeneID:1096586;Name=SCG8A.17c;gbkey=Gene;gene=SCG8A.17c;gene_biotype=protein_coding;gene_synonym=SCG8A.17c;locus_tag=SCO1163
NC_003888.3	RefSeq	CDS	1223235	1224134	.	-	0	ID=cds1128;Parent=gene1149;Dbxref=Genbank:NP_625455.1,GeneID:1096586;Name=NP_625455.1;Note=SCG8A.17c%2C unknown%2C len: 299 aa%3B region 230-290aa similar to region from several eg. TR:Q22551 (EMBL:U41746) T18H9.1 from Caenorhabditis elegans (586 aa) fasta scores%3B opt: 110%2C z-score: 134.9%2C E(): 4.5%2C 29.5%25 identity in 105 aa overlap and TR:P72390 (EMBL:U51332) hypothetical protein from Streptomyces coelicolor (122 aa) fasta scores%3B opt: 101%2C z-score: 134.5%2C E(): 4.8%2C 40.0%25 identity in 75 aa overlap.;gbkey=CDS;gene=SCG8A.17c;product=hypothetical protein;protein_id=NP_625455.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1224137	1224141	.	-	.	ID=id1376;gbkey=RBS
NC_003888.3	RefSeq	gene	1224211	1224537	.	+	.	ID=gene1150;Dbxref=GeneID:1096587;Name=SCG8A.18;gbkey=Gene;gene=SCG8A.18;gene_biotype=protein_coding;gene_synonym=SCG8A.18;locus_tag=SCO1164
NC_003888.3	RefSeq	CDS	1224211	1224537	.	+	0	ID=cds1129;Parent=gene1150;Dbxref=Genbank:NP_625456.1,GeneID:1096587;Name=NP_625456.1;Note=SCG8A.18%2C unknown%2C len: 108aa;gbkey=CDS;gene=SCG8A.18;product=hypothetical protein;protein_id=NP_625456.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1224667	1224671	.	+	.	ID=id1377;gbkey=RBS
NC_003888.3	RefSeq	gene	1224677	1225594	.	+	.	ID=gene1151;Dbxref=GeneID:1096588;Name=SCG8A.19;gbkey=Gene;gene=SCG8A.19;gene_biotype=protein_coding;gene_synonym=SCG8A.19;locus_tag=SCO1165
NC_003888.3	RefSeq	CDS	1224677	1225594	.	+	0	ID=cds1130;Parent=gene1151;Dbxref=Genbank:NP_625457.1,GeneID:1096588;Name=NP_625457.1;Note=SCG8A.19%2C possible integral membrane protein%2C len: 305aa%3B Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCG8A.19;product=hypothetical protein;protein_id=NP_625457.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1224810	1224828	.	-	.	ID=id1378;Note=part of inverted repeat%2C complement(17307..17325);gbkey=repeat_region
NC_003888.3	RefSeq	gene	1225651	1225983	.	-	.	ID=gene1152;Dbxref=GeneID:1096589;Name=SCG8A.20c;gbkey=Gene;gene=SCG8A.20c;gene_biotype=protein_coding;gene_synonym=SCG8A.20c;locus_tag=SCO1166
NC_003888.3	RefSeq	CDS	1225651	1225983	.	-	0	ID=cds1131;Parent=gene1152;Dbxref=Genbank:NP_625458.1,GeneID:1096589;Name=NP_625458.1;Note=SCG8A.20c%2C possible integral membrane protein%2C len: 110aa%3B Contains possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCG8A.20c;product=hypothetical protein;protein_id=NP_625458.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1225994	1225998	.	-	.	ID=id1379;gbkey=RBS
NC_003888.3	RefSeq	gene	1226297	1228969	.	+	.	ID=gene1153;Dbxref=GeneID:1096590;Name=2SCG11.01;gbkey=Gene;gene=2SCG11.01;gene_biotype=protein_coding;gene_synonym=2SCG11.01,SCG8A.21;locus_tag=SCO1167
NC_003888.3	RefSeq	CDS	1226297	1228969	.	+	0	ID=cds1132;Parent=gene1153;Dbxref=Genbank:NP_733524.1,GeneID:1096590;Name=NP_733524.1;Note=2SCG11.01%2C probable helicase (fragment)%2C len: >697 aa%3B similar to C-terminal region of TR:CAB60181 (EMBL:AL132824) Streptomyces coelicolor helicase SCAH10.27%2C 977 aa%3B fasta scores: opt: 2570 z-score: 2915.8 E(): 0%3B 65.9%25 identity in 698 aa overlap. Contains Pfam match to entry PF00176 SNF2_N%2C SNF2 and others N-terminal domain and to PF00271 helicase_C%2C Helicases conserved C-terminal domain~SCG8A.21%2C partial CDS%2C possible helicase%2C len: >223aa%3B similar to TR:CAB60181 (EMBL:AL132824) helicase from Streptomyces coelicolor (977 aa) fasta scores%3B opt: 601%2C z-score: 651.6%2C E(): 7.5e-29%2C 51.1%25 identity in 231 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SCG11.01;product=helicase;protein_id=NP_733524.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1227575	1228408	.	+	.	ID=id1380;Dbxref=GeneID:1096590;Note=Pfam match to entry PF00176 SNF2_N%2C SNF2 and others N-terminal domain%2C score 212.10%2C E-value 8.4e-60;gbkey=misc_feature;gene=2SCG11.01
NC_003888.3	RefSeq	sequence_feature	1228535	1228783	.	+	.	ID=id1381;Dbxref=GeneID:1096590;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 90.50%2C E-value 3.3e-23;gbkey=misc_feature;gene=2SCG11.01
NC_003888.3	RefSeq	ribosome_entry_site	1228953	1228956	.	+	.	ID=id1382;Dbxref=GeneID:1096590;gbkey=RBS;gene=2SCG11.01
NC_003888.3	RefSeq	gene	1228966	1230234	.	+	.	ID=gene1154;Dbxref=GeneID:1096591;Name=2SCG11.02;gbkey=Gene;gene=2SCG11.02;gene_biotype=protein_coding;gene_synonym=2SCG11.02;locus_tag=SCO1168
NC_003888.3	RefSeq	CDS	1228966	1230234	.	+	0	ID=cds1133;Parent=gene1154;Dbxref=Genbank:NP_625459.1,GeneID:1096591;Name=NP_625459.1;Note=2SCG11.02c%2C hypothetical protein%2C len: 422 aa%3B similar to C-terminal region of TR:CAB60182 (EMBL:AL132824) Streptomyces coelicolor hypothetical 81.9 kD protein SCAH10.28%2C 797 aa%3B fasta scores: opt: 1009 z-score: 960.4 E(): 0%3B 44.4%25 identity in 435 aa overlap;gbkey=CDS;gene=2SCG11.02;product=hypothetical protein;protein_id=NP_625459.1;transl_table=11
NC_003888.3	RefSeq	gene	1230329	1231492	.	-	.	ID=gene1155;Dbxref=GeneID:1096592;Name=2SCG11.03c;gbkey=Gene;gene=2SCG11.03c;gene_biotype=protein_coding;gene_synonym=2SCG11.03c,xylA;locus_tag=SCO1169
NC_003888.3	RefSeq	CDS	1230329	1231492	.	-	0	ID=cds1134;Parent=gene1155;Dbxref=Genbank:NP_625460.1,GeneID:1096592;Name=NP_625460.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;gene=2SCG11.03c;product=xylose isomerase;protein_id=NP_625460.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1230341	1231474	.	-	.	ID=id1383;Dbxref=GeneID:1096592;Note=Pfam match to entry PF00259 Xylose_isom%2C Xylose isomerase%2C score 761.20%2C E-value 4.3e-225;gbkey=misc_feature;gene=2SCG11.03c
NC_003888.3	RefSeq	sequence_feature	1230932	1230955	.	-	.	ID=id1384;Dbxref=GeneID:1096592;Note=PS00172 Xylose isomerase signature 1;gbkey=misc_feature;gene=2SCG11.03c
NC_003888.3	RefSeq	sequence_feature	1231307	1231336	.	-	.	ID=id1385;Dbxref=GeneID:1096592;Note=PS00173 Xylose isomerase signature 2;gbkey=misc_feature;gene=2SCG11.03c
NC_003888.3	RefSeq	ribosome_entry_site	1231500	1231503	.	-	.	ID=id1386;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1231637	1231641	.	+	.	ID=id1387;gbkey=RBS
NC_003888.3	RefSeq	gene	1231648	1233093	.	+	.	ID=gene1156;Dbxref=GeneID:1096593;Name=2SCG11.04;gbkey=Gene;gene=2SCG11.04;gene_biotype=protein_coding;gene_synonym=2SCG11.04,SCG11A.01,xylB;locus_tag=SCO1170
NC_003888.3	RefSeq	CDS	1231648	1233093	.	+	0	ID=cds1135;Parent=gene1156;Dbxref=Genbank:NP_733525.1,GeneID:1096593;Name=NP_733525.1;Note=2SCG11.04c%2C xylB%2C xylulose kinase (fragment)%2C len: >81 aa%3B identical to N-terminal region of SW:XYLB_STRRU (EMBL:M73789) Streptomyces rubiginosus xylulose kinase (EC 2.7.1.17) XylB%2C 481 aa~SCG11A.01%2C xylB%2C xylulose kinase%2C len: >432 aa%3B highly similar to SW:XYLB_STRRU (EMBL:M73789) Streptomyces rubiginosus xylulose kinase (EC 2.7.1.17) (xylulokinase) XylB%2C 481 aa%3B fasta scores: opt: 2553 z-score: 2795.9 E(): 0%3B 89.2%25 identity in 427 aa overlap. Contains match to Pfam entry PF00370 FGGY%2C FGGY family of carbohydrate kinases and two Prosite matches to entries PS00933 FGGY family of carbohydrate kinases signature and PS00445 FGGY family of carbohydrate kinases signature 2;gbkey=CDS;gene=2SCG11.04;product=xylulose kinase;protein_id=NP_733525.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1231870	1232916	.	+	.	ID=id1388;Dbxref=GeneID:1096593;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C score 514.30%2C E-value 8.7e-151;gbkey=misc_feature;gene=2SCG11.04
NC_003888.3	RefSeq	sequence_feature	1232044	1232082	.	+	.	ID=id1389;Dbxref=GeneID:1096593;Note=PS00933 FGGY family of carbohydrate kinases signature 1;gbkey=misc_feature;gene=2SCG11.04
NC_003888.3	RefSeq	sequence_feature	1232668	1232730	.	+	.	ID=id1390;Dbxref=GeneID:1096593;Note=PS00445 FGGY family of carbohydrate kinases signature 2;gbkey=misc_feature;gene=2SCG11.04
NC_003888.3	RefSeq	ribosome_entry_site	1233313	1233317	.	+	.	ID=id1391;gbkey=RBS
NC_003888.3	RefSeq	gene	1233319	1234527	.	+	.	ID=gene1157;Dbxref=GeneID:1096594;Name=SCG11A.02;gbkey=Gene;gene=SCG11A.02;gene_biotype=protein_coding;gene_synonym=SCG11A.02;locus_tag=SCO1171
NC_003888.3	RefSeq	CDS	1233319	1234527	.	+	0	ID=cds1136;Parent=gene1157;Dbxref=Genbank:NP_625461.1,GeneID:1096594;Name=NP_625461.1;Note=SCG11A.02%2C possible xylose repressor%2C len: 402 aa%3B similar to SW:XYLR_BACSU (EMBL:M27248) Bacillus subtilis xylose repressor xylR%2C 384 aa%3B fasta scores: opt: 612 z-score: 642.4 E(): 2.1e-28%3B 29.4%25 identity in 381 aa overlap. Contains match to Pfam entry PF00480 ROK%2C ROK family and a possible helix-turn-helix motif at residues 43..64 (+3.15 SD);gbkey=CDS;gene=SCG11A.02;product=xylose repressor;protein_id=NP_625461.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1233616	1234167	.	+	.	ID=id1392;Dbxref=GeneID:1096594;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 131.80%2C E-value 4e-38;gbkey=misc_feature;gene=SCG11A.02
NC_003888.3	RefSeq	gene	1234835	1235440	.	+	.	ID=gene1158;Dbxref=GeneID:1096595;Name=SCG11A.03;gbkey=Gene;gene=SCG11A.03;gene_biotype=protein_coding;gene_synonym=SCG11A.03;locus_tag=SCO1172
NC_003888.3	RefSeq	CDS	1234835	1235440	.	+	0	ID=cds1137;Parent=gene1158;Dbxref=Genbank:NP_625462.1,GeneID:1096595;Name=NP_625462.1;Note=SCG11A.03%2C probable amidase (hypothetical protein)%2C len: 201 aa%3B similar to SW:AMPD_ECOLI (EMBL:X15237) Escherichia coli anhydro-N-acetylmuramyl-tripeptide amidase AmpD%2C 183aa%3B fasta scores: opt: 211 z-score: 267.1 E(): 1.7e-07%3B 39.5%25 identity in 114 aa overlap and to Streptomyces coelicolor SC2A11.21c%3B fasta scores: opt: 674 z-score: 751.6 E(): 0%3B 50.0%25 identity in 202 aa overlap. Contains match to Pfam entry PF01510 Amidase_2%2C N-acetylmuramoyl-L-alanine amidase. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCG11A.03;product=amidase;protein_id=NP_625462.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1234985	1235431	.	+	.	ID=id1393;Dbxref=GeneID:1096595;Note=Pfam match to entry PF01510 Amidase_2%2C N-acetylmuramoyl-L-alanine amidase%2C score 89.80%2C E-value 5.7e-23;gbkey=misc_feature;gene=SCG11A.03
NC_003888.3	RefSeq	ribosome_entry_site	1235605	1235609	.	+	.	ID=id1394;gbkey=RBS
NC_003888.3	RefSeq	gene	1235615	1236874	.	+	.	ID=gene1159;Dbxref=GeneID:1096596;Name=SCG11A.04;gbkey=Gene;gene=SCG11A.04;gene_biotype=protein_coding;gene_synonym=SCG11A.04;locus_tag=SCO1173
NC_003888.3	RefSeq	CDS	1235615	1236874	.	+	0	ID=cds1138;Parent=gene1159;Dbxref=Genbank:NP_625463.1,GeneID:1096596;Name=NP_625463.1;Note=SCG11A.04%2C possible transcriptional regulator%2C len: aa%3B similar to TR:O31551 (EMBL:Z99108) Bacillus subtilis transcriptional regulator AcoR%2C 605 aa%3B fasta scores: opt: 393 z-score: 446.5 E(): 1.7e-17%3B 34.7%25 identity in 199 aa overlap;gbkey=CDS;gene=SCG11A.04;product=transcriptional regulator;protein_id=NP_625463.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1236999	1237003	.	+	.	ID=id1395;gbkey=RBS
NC_003888.3	RefSeq	gene	1237012	1238535	.	+	.	ID=gene1160;Dbxref=GeneID:1096597;Name=SCG11A.05;gbkey=Gene;gene=SCG11A.05;gene_biotype=protein_coding;gene_synonym=SCG11A.05,thcA;locus_tag=SCO1174
NC_003888.3	RefSeq	CDS	1237012	1238535	.	+	0	ID=cds1139;Parent=gene1160;Dbxref=Genbank:NP_625464.1,GeneID:1096597;Name=NP_625464.1;Note=SCG11A.05%2C thcA%2C aldehyde dehydrogenase%2C len:534 aa%3B highly similar to SW:THCA_RHOSN (EMBL:U17129) Rhodococcus sp. (strain NI86/21) EPTC-inducible aldehyde dehydrogenase (EC 1.2.1.3) ThcA%2C 505 aa%3B fasta scores: opt: 2639 z-score: 3078.6 E(): 0%3B 75.7%25 identity in 506 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase and two matches to Prostie entries PS00687 Aldehyde dehydrogenases glutamic acid active site and PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=CDS;gene=SCG11A.05;product=aldehyde dehydrogenase;protein_id=NP_625464.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1237090	1238508	.	+	.	ID=id1396;Dbxref=GeneID:1096597;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase%2C score 762.00%2C E-value 2.5e-225;gbkey=misc_feature;gene=SCG11A.05
NC_003888.3	RefSeq	sequence_feature	1237795	1237818	.	+	.	ID=id1397;Dbxref=GeneID:1096597;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SCG11A.05
NC_003888.3	RefSeq	sequence_feature	1237894	1237929	.	+	.	ID=id1398;Dbxref=GeneID:1096597;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SCG11A.05
NC_003888.3	RefSeq	gene	1238595	1239002	.	-	.	ID=gene1161;Dbxref=GeneID:1096598;Name=SCG11A.06c;gbkey=Gene;gene=SCG11A.06c;gene_biotype=protein_coding;gene_synonym=SCG11A.06c;locus_tag=SCO1175
NC_003888.3	RefSeq	CDS	1238595	1239002	.	-	0	ID=cds1140;Parent=gene1161;Dbxref=Genbank:NP_625465.1,GeneID:1096598;Name=NP_625465.1;Note=SCG11A.06c%2C hypothetical protein%2C len: 153 aa%3B similar to C-terminus of TR:O52556 (EMBL:AF040570) Amycolatopsis mediterranei esterase%2C 310 aa%3B fasta scores: opt: 303 z-score: 372.1 E(): 2.4e-13%3B 45.1%25 identity in 113 aa overlap;gbkey=CDS;gene=SCG11A.06c;product=hypothetical protein;protein_id=NP_625465.1;transl_table=11
NC_003888.3	RefSeq	gene	1239663	1241453	.	-	.	ID=gene1162;Dbxref=GeneID:1096599;Name=SCG11A.07c;gbkey=Gene;gene=SCG11A.07c;gene_biotype=protein_coding;gene_synonym=SCG11A.07c;locus_tag=SCO1176
NC_003888.3	RefSeq	CDS	1239663	1241453	.	-	0	ID=cds1141;Parent=gene1162;Dbxref=Genbank:NP_625466.1,GeneID:1096599;Name=NP_625466.1;Note=catalyzes the formation of 3-methyl-2-oxobutanoate from 2%2C3%2C-dihydroxy-3-methylbutanoate;gbkey=CDS;gene=SCG11A.07c;product=dihydroxy-acid dehydratase;protein_id=NP_625466.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1239834	1241240	.	-	.	ID=id1399;Dbxref=GeneID:1096599;Note=Pfam match to entry PF00920 ILVD_EDD%2C Dehydratase family%2C score 417.60%2C E-value 1.2e-121;gbkey=misc_feature;gene=SCG11A.07c
NC_003888.3	RefSeq	sequence_feature	1241049	1241081	.	-	.	ID=id1400;Dbxref=GeneID:1096599;Note=PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1;gbkey=misc_feature;gene=SCG11A.07c
NC_003888.3	RefSeq	ribosome_entry_site	1241461	1241464	.	-	.	ID=id1401;gbkey=RBS
NC_003888.3	RefSeq	gene	1241562	1242302	.	+	.	ID=gene1163;Dbxref=GeneID:1096600;Name=SCG11A.08;gbkey=Gene;gene=SCG11A.08;gene_biotype=protein_coding;gene_synonym=SCG11A.08;locus_tag=SCO1177
NC_003888.3	RefSeq	CDS	1241562	1242302	.	+	0	ID=cds1142;Parent=gene1163;Dbxref=Genbank:NP_625467.1,GeneID:1096600;Name=NP_625467.1;Note=SCG11A.08%2C probable gntR-famly transcriptional regulator%2C len: 246 aa%3B similar to SW:DGOR_ECOLI (EMBL:L10328) Escherichia coli galactone operon transcriptional repressor GdoR%2C 229 aa%3B fasta scores: opt: 409 z-score: 460.9 E(): 2.7e-18%3B 36.5%25 identity in 219 aa overlap and to TR:O50536 (EMBL:AJ003022) Streptomyces coelicolor sporulation transcription factor WhiH%2C 295 aa%3B fasta scores: opt: 370 z-score: 416.5 E(): 8e-16%3B 35.2%25 identity in 230 aa overlap. Contians match to Pfam entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and match to Prosite entry PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=CDS;gene=SCG11A.08;product=gntR-famly transcriptional regulator;protein_id=NP_625467.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1241616	1241795	.	+	.	ID=id1402;Dbxref=GeneID:1096600;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 55.10%2C E-value 1.8e-15;gbkey=misc_feature;gene=SCG11A.08
NC_003888.3	RefSeq	sequence_feature	1241673	1241747	.	+	.	ID=id1403;Dbxref=GeneID:1096600;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCG11A.08
NC_003888.3	RefSeq	gene	1242334	1242783	.	-	.	ID=gene1164;Dbxref=GeneID:1096601;Name=SCG11A.09c;gbkey=Gene;gene=SCG11A.09c;gene_biotype=protein_coding;gene_synonym=SCG11A.09c;locus_tag=SCO1178
NC_003888.3	RefSeq	CDS	1242334	1242783	.	-	0	ID=cds1143;Parent=gene1164;Dbxref=Genbank:NP_625468.1,GeneID:1096601;Name=NP_625468.1;Note=SCG11A.09c%2C unknown%2C len: 149 aa;gbkey=CDS;gene=SCG11A.09c;product=hypothetical protein;protein_id=NP_625468.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1242799	1242802	.	-	.	ID=id1404;gbkey=RBS
NC_003888.3	RefSeq	gene	1242817	1243575	.	-	.	ID=gene1165;Dbxref=GeneID:1096602;Name=SCG11A.10c;gbkey=Gene;gene=SCG11A.10c;gene_biotype=protein_coding;gene_synonym=SCG11A.10c;locus_tag=SCO1179
NC_003888.3	RefSeq	CDS	1242817	1243575	.	-	0	ID=cds1144;Parent=gene1165;Dbxref=Genbank:NP_625469.1,GeneID:1096602;Name=NP_625469.1;Note=SCG11A.10c%2C hypothetical protein%2C len: 252 aa%3B similar to various hypothetical proteins%2C e.g. TR:P95287 (EMBL:Z84498) Mycobacterium tuberculosis hypothetical 28.6 KD protein MTCY09F9.37c%2C 257 aa%3B fasta scores: opt: 729 z-score: 872.2 E(): 0%3B 48.3%25 identity in 238 aa overlap;gbkey=CDS;gene=SCG11A.10c;product=hypothetical protein;protein_id=NP_625469.1;transl_table=11
NC_003888.3	RefSeq	gene	1243639	1244799	.	+	.	ID=gene1166;Dbxref=GeneID:1096603;Name=SCG11A.11;gbkey=Gene;gene=SCG11A.11;gene_biotype=protein_coding;gene_synonym=SCG11A.11;locus_tag=SCO1180
NC_003888.3	RefSeq	CDS	1243639	1244799	.	+	0	ID=cds1145;Parent=gene1166;Dbxref=Genbank:NP_625470.1,GeneID:1096603;Name=NP_625470.1;Note=SCG11A.11%2C probable DNA polymerase III beta chain%2C len: 386 aa%3B N-terminal region similar to TR:O54191 (EMBL:AL021411) Streptomyces coelicolor transcriptional regulator SC7H1.32c%2C 196 aa%3B fasta scores: opt: 211 z-score: 244.3 E(): 3.1e-06%3B 37.2%25 identity in 196 aa overlap and C-terminal region similar to SW:DP3B_MYCLE (EMBL:L39923) Mycobacterium leprae DNA polymerase III%2C beta chain (EC 2.7.7.7) DnaN%2C 399 aa%3B fasta scores: opt: 285 z-score: 322.3 E(): 1.4e-10%3B 30.7%25 identity in 358 aa overlap. Contains match in N-terminal region to Pfam entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and C-terminal region to Pfam entry PF00712 DNA_pol3_beta%2C DNA polymerase III beta subunit. Contains a possible helix-turn-helix motif at residues 21..42 (+2.82 SD);gbkey=CDS;gene=SCG11A.11;product=DNA polymerase III subunit beta;protein_id=NP_625470.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1243705	1243815	.	+	.	ID=id1405;Dbxref=GeneID:1096603;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 28.80%2C E-value 9.3e-05;gbkey=misc_feature;gene=SCG11A.11
NC_003888.3	RefSeq	sequence_feature	1243837	1244778	.	+	.	ID=id1406;Dbxref=GeneID:1096603;Note=Pfam match to entry PF00712 DNA_pol3_beta%2C DNA polymerase III beta subunit%2C score -72.20%2C E-value 2.5e-05;gbkey=misc_feature;gene=SCG11A.11
NC_003888.3	RefSeq	ribosome_entry_site	1244910	1244914	.	+	.	ID=id1407;gbkey=RBS
NC_003888.3	RefSeq	gene	1244920	1245774	.	+	.	ID=gene1167;Dbxref=GeneID:1096604;Name=SCG11A.12;gbkey=Gene;gene=SCG11A.12;gene_biotype=protein_coding;gene_synonym=SCG11A.12;locus_tag=SCO1181
NC_003888.3	RefSeq	CDS	1244920	1245774	.	+	0	ID=cds1146;Parent=gene1167;Dbxref=Genbank:NP_625471.1,GeneID:1096604;Name=NP_625471.1;Note=SCG11A.12%2C hypothetical protein%2C len:284 aa%3B similar to TR:CAB46974 (EMBL:AL096825) Streptomyces coelicolor hypothetical 31.8 KD protein SC6G3.02%2C 292 aa%3B fasta scores: opt: 864 z-score: 1038.3 E(): 0%3B 47.9%25 identity in 286 aa overlap and to TR:O52845 (EMBL:AJ223073) Bradyrhizobium japonicum phosphate regulatroy protein%2C PhoB%2C 235 aa%3B fasta scores: opt: 113 z-score: 142.6 E(): 1.4%3B 32.1%25 identity in 131 aa overlap;gbkey=CDS;gene=SCG11A.12;product=hypothetical protein;protein_id=NP_625471.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1245759	1245762	.	+	.	ID=id1408;Dbxref=GeneID:1096604;gbkey=RBS;gene=SCG11A.12
NC_003888.3	RefSeq	gene	1245771	1250951	.	+	.	ID=gene1168;Dbxref=GeneID:1096605;Name=SCG11A.13;gbkey=Gene;gene=SCG11A.13;gene_biotype=protein_coding;gene_synonym=SCG11A.13;locus_tag=SCO1182
NC_003888.3	RefSeq	CDS	1245771	1250951	.	+	0	ID=cds1147;Parent=gene1168;Dbxref=Genbank:NP_625472.1,GeneID:1096605;Name=NP_625472.1;Note=SCG11A.13%2C hypothetical protein%2C len: 1726 aa%3B similar to TR:CAB46975 (EMBL:AL096825) Streptomyces coelicolor hypothetical 181.5 KD protein SC6G3.03%2C 1678 aa%3B fasta scores: opt: 690 z-score: 716.6 E(): 1.5e-32%3B 35.6%25 identity in 1800 aa overlap;gbkey=CDS;gene=SCG11A.13;product=hypothetical protein;protein_id=NP_625472.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1250991	1250995	.	+	.	ID=id1409;gbkey=RBS
NC_003888.3	RefSeq	gene	1251004	1252173	.	+	.	ID=gene1169;Dbxref=GeneID:1096606;Name=SCG11A.14;gbkey=Gene;gene=SCG11A.14;gene_biotype=protein_coding;gene_synonym=SCG11A.14;locus_tag=SCO1183
NC_003888.3	RefSeq	CDS	1251004	1252173	.	+	0	ID=cds1148;Parent=gene1169;Dbxref=Genbank:NP_625473.1,GeneID:1096606;Name=NP_625473.1;Note=SCG11A.14%2C hypothetical protein%2C len:389 aa: similar to various hypothetical proteins%2C e.g. SW:YEHL_ECOLI (EMBL:U00007) Escherichia coli hypothetical 42.4 KD protein in MolR-BglX intergenic region%2C 384 aa%3B fasta scores: opt: 873 z-score: 979.4 E(): 0%3B 45.1%25 identity in 381 aa overlap;gbkey=CDS;gene=SCG11A.14;product=hypothetical protein;protein_id=NP_625473.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1252164	1252168	.	+	.	ID=id1410;Dbxref=GeneID:1096606;gbkey=RBS;gene=SCG11A.14
NC_003888.3	RefSeq	gene	1252179	1256141	.	+	.	ID=gene1170;Dbxref=GeneID:1096607;Name=SCG11A.15;gbkey=Gene;gene=SCG11A.15;gene_biotype=protein_coding;gene_synonym=SCG11A.15;locus_tag=SCO1184
NC_003888.3	RefSeq	CDS	1252179	1256141	.	+	0	ID=cds1149;Parent=gene1170;Dbxref=Genbank:NP_625474.1,GeneID:1096607;Name=NP_625474.1;Note=SCG11A.15%2C hypothetical protein%2C len: 1320 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB46976 (EMBL:AL096825) Streptomyces coelicolor hypothetical 122.6 KD protein SC6G3.04%2C 1171 aa%3B fasta scores: opt: 1532 z-score: 1249.6 E(): 0%3B 50.6%25 identity in 1315 aa overlap and to SW:YEHP_ECOLI (EMBL:U00007) Escherichia coli hypothetical 42.1 KD protein in MolR-BglX intergenic region YehP%2C 378 aa%3B fasta scores: opt: 660 z-score: 547.5 E(): 4e-23%3B 37.5%25 identity in 379 aa overlap;gbkey=CDS;gene=SCG11A.15;product=hypothetical protein;protein_id=NP_625474.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1256126	1256129	.	+	.	ID=id1411;Dbxref=GeneID:1096607;gbkey=RBS;gene=SCG11A.15
NC_003888.3	RefSeq	gene	1256138	1258141	.	+	.	ID=gene1171;Dbxref=GeneID:1096608;Name=SCG11A.16;gbkey=Gene;gene=SCG11A.16;gene_biotype=protein_coding;gene_synonym=SCG11A.16;locus_tag=SCO1185
NC_003888.3	RefSeq	CDS	1256138	1258141	.	+	0	ID=cds1150;Parent=gene1171;Dbxref=Genbank:NP_625475.1,GeneID:1096608;Name=NP_625475.1;Note=SCG11A.16%2C hypothetical protein%2C len: 667 aa%3B similar to TR:CAB46977 (EMBL:AL096825) Streptomyces coelicolor hypothetical 60.3 KD protein SC6G3.05%2C 588 aa%3B fasta scores: opt: 633 z-score: 462.0 E(): 2.3e-18%3B 40.4%25 identity in 680 aa overlap;gbkey=CDS;gene=SCG11A.16;product=hypothetical protein;protein_id=NP_625475.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1258203	1258207	.	+	.	ID=id1412;gbkey=RBS
NC_003888.3	RefSeq	gene	1258218	1259243	.	+	.	ID=gene1172;Dbxref=GeneID:1096609;Name=SCG11A.17;gbkey=Gene;gene=SCG11A.17;gene_biotype=protein_coding;gene_synonym=SCG11A.17;locus_tag=SCO1186
NC_003888.3	RefSeq	CDS	1258218	1259243	.	+	0	ID=cds1151;Parent=gene1172;Dbxref=Genbank:NP_625476.1,GeneID:1096609;Name=NP_625476.1;Note=SCG11A.17%2C probable lacI-family transcriptional regulator%2C len: 341 aa%3B similar to TR:CAB46346 (EMBL:AJ009798) Streptomyces reticuli regulatory protein CebR%2C 350 aa%3B fasta scores: opt: 1241 z-score: 1440.4 E(): 0%3B 57.9%25 identity in 347 aa overlap and to SW:PURR_ECOLI (EMBL:J04212) Escherichia coli purine nucleotide synthesis repressor PurR%2C 340 aa%3B fasta scores: opt: 587 z-score: 684.5 E(): 9.5e-31%3B 35.7%25 identity in 336 aa overlap and to Streptomyces coelicolor SC4G6.23%3B fasta scores: opt: 989 z-score: 952.6 E(): 0%3B 53.8%25 identity in 316 aa overlap. Contains matches to Pfam entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and to Prosite entry PS00356 Bacterial regulatory proteins%2C lacI family signature. Contains also a possible helix-turn-helix motif at residues 10..31 (+6.13 SD);gbkey=CDS;gene=SCG11A.17;product=LacI family transcriptional regulator;protein_id=NP_625476.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1258236	1258319	.	+	.	ID=id1413;Dbxref=GeneID:1096609;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 30.70%2C E-value 3.8e-07;gbkey=misc_feature;gene=SCG11A.17
NC_003888.3	RefSeq	sequence_feature	1258248	1258304	.	+	.	ID=id1414;Dbxref=GeneID:1096609;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCG11A.17
NC_003888.3	RefSeq	sequence_feature	1258410	1259150	.	+	.	ID=id1415;Dbxref=GeneID:1096609;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 116.60%2C E-value 4.6e-31;gbkey=misc_feature;gene=SCG11A.17
NC_003888.3	RefSeq	ribosome_entry_site	1259449	1259452	.	+	.	ID=id1416;gbkey=RBS
NC_003888.3	RefSeq	gene	1259461	1260606	.	+	.	ID=gene1173;Dbxref=GeneID:1096610;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;gene_synonym=celB,SCG11A.18;locus_tag=SCO1187
NC_003888.3	RefSeq	CDS	1259461	1260606	.	+	0	ID=cds1152;Parent=gene1173;Dbxref=Genbank:NP_625477.1,GeneID:1096610;Name=NP_625477.1;Note=SCG11A.18%2C celB%2C  cellulase B precursor%2C len: 381 aa%3B identical to TR:Q54331 (EMBL:U04629) Streptomyces lividans cellulase precursor%2C celB%2C 381 aa and similar to SW:GUX_CELFI (EMBL:M15824) Cellulomonas fimi exoglucanase/xylanase precursor [includes: exoglucanase (EC 3.2.1.91) (exocellobiohydrolase) (1%2C4-beta-cellobiohydrolase) (beta-1%2C4- glycanase Cex)%3B endo-1%2C4-beta-xylanase B (EC 3.2.1.8) (xylanase B) Cex or XynB%2C 484 aa%3B fasta scores: opt: 422 z-score: 450.5 E(): 1e-17%3B 48.8%25 identity in 123 aa overlap. Contains two matches to Pfam entries PF01670 Glyco_hydro_12%2C Glycosyl hydrolase family 12 and PF00553 CBD_2%2C Cellulose binding domain and match to Prosite entry PS00561 Cellulose-binding domain%2C bacterial type. Contains also possible signal peptide sequence;gbkey=CDS;gene=celB;product=cellulase B;protein_id=NP_625477.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1259791	1260243	.	+	.	ID=id1417;Dbxref=GeneID:1096610;Note=Pfam match to entry PF01670 Glyco_hydro_12%2C Glycosyl hydrolase family 12%2C score 293.70%2C E-value 2.3e-84;gbkey=misc_feature;gene=celB
NC_003888.3	RefSeq	sequence_feature	1260295	1260594	.	+	.	ID=id1418;Dbxref=GeneID:1096610;Note=Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain%2C score 152.60%2C E-value 3.3e-43;gbkey=misc_feature;gene=celB
NC_003888.3	RefSeq	sequence_feature	1260433	1260474	.	+	.	ID=id1419;Dbxref=GeneID:1096610;Note=PS00561 Cellulose-binding domain%2C bacterial type;gbkey=misc_feature;gene=celB
NC_003888.3	RefSeq	ribosome_entry_site	1260844	1260848	.	+	.	ID=id1420;gbkey=RBS
NC_003888.3	RefSeq	gene	1260854	1261948	.	+	.	ID=gene1174;Dbxref=GeneID:1096611;Name=celS2;gbkey=Gene;gene=celS2;gene_biotype=protein_coding;gene_synonym=celS2,SCG11A.19;locus_tag=SCO1188
NC_003888.3	RefSeq	CDS	1260854	1261948	.	+	0	ID=cds1153;Parent=gene1174;Dbxref=Genbank:NP_625478.1,GeneID:1096611;Name=NP_625478.1;Note=SCG11A.19%2C celS2%2C  cellulose binding protein len: 364 aa%3B highly similar to TR:AAD27623 (EMBL:AF126376) Streptomyces viridosporus cellulose binding protein CelS2%2C 358 aa%3B fasta scores: opt: 2109 z-score: 2160.9 E(): 0%3B 81.9%25 identity in 364 aa overlap and to SW:GUNA_MICBI Microbispora bispora endoglucanase A precursor (EC 3.2.1.4) (endo-1%2C4-beta-glucanase) (CELLULASE) CelA%2C 456 aa%3B fasta scores: opt: 350 z-score: 363.9 E(): 6.8e-13%3B 30.6%25 identity in 278 aa overlap. Contains match to Pfam entry PF00553 CBD_2%2C Cellulose binding domain. Contains also possible signal peptide sequence;gbkey=CDS;gene=celS2;product=cellulose binding protein;protein_id=NP_625478.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1261646	1261906	.	+	.	ID=id1421;Dbxref=GeneID:1096611;Note=Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain%2C score 74.40%2C E-value 2.4e-20;gbkey=misc_feature;gene=celS2
NC_003888.3	RefSeq	gene	1262121	1262546	.	+	.	ID=gene1175;Dbxref=GeneID:1096612;Name=SCG11A.20;gbkey=Gene;gene=SCG11A.20;gene_biotype=protein_coding;gene_synonym=SCG11A.20;locus_tag=SCO1189
NC_003888.3	RefSeq	CDS	1262121	1262546	.	+	0	ID=cds1154;Parent=gene1175;Dbxref=Genbank:NP_625479.1,GeneID:1096612;Name=NP_625479.1;Note=SCG11A.20%2C unknown%2C len: 141 aa;gbkey=CDS;gene=SCG11A.20;product=hypothetical protein;protein_id=NP_625479.1;transl_table=11
NC_003888.3	RefSeq	gene	1262509	1264110	.	-	.	ID=gene1176;Dbxref=GeneID:1096613;Name=SCG11A.21c;gbkey=Gene;gene=SCG11A.21c;gene_biotype=protein_coding;gene_synonym=SCG11A.21c;locus_tag=SCO1190
NC_003888.3	RefSeq	CDS	1262509	1264110	.	-	0	ID=cds1155;Parent=gene1176;Dbxref=Genbank:NP_625480.1,GeneID:1096613;Name=NP_625480.1;Note=SCG11A.21c%2C probable export protein%2C len: 533 aa%3B similar to SW:TCMA_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA%2C 538 aa%3B fasta scores: opt: 1520 z-score: 1545.7 E(): 0%3B 45.7%25 identity in 523 aa overlap;gbkey=CDS;gene=SCG11A.21c;product=export protein;protein_id=NP_625480.1;transl_table=11
NC_003888.3	RefSeq	gene	1264183	1264656	.	-	.	ID=gene1177;Dbxref=GeneID:1096614;Name=SCG11A.22c;gbkey=Gene;gene=SCG11A.22c;gene_biotype=protein_coding;gene_synonym=SCG11A.22c;locus_tag=SCO1191
NC_003888.3	RefSeq	CDS	1264183	1264656	.	-	0	ID=cds1156;Parent=gene1177;Dbxref=Genbank:NP_625481.1,GeneID:1096614;Name=NP_625481.1;Note=SCG11A.22c%2C possible marR-family transcriptional regulator%2C len: 157 aa%3B low similarity to TR:CAB48917 (EMBL:AL096837) Streptomyces coelicolor marR-family transcriptional regulator SCF43A.30c%2C 169 aa%3B fasta scores: opt: 125 z-score: 167.7 E(): 0.058%3B 30.6%25 identity in 147 aa overlap;gbkey=CDS;gene=SCG11A.22c;product=MarR family transcriptional regulator;protein_id=NP_625481.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1264222	1264533	.	-	.	ID=id1422;Dbxref=GeneID:1096614;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 47.10%2C E-value 3.8e-10;gbkey=misc_feature;gene=SCG11A.22c
NC_003888.3	RefSeq	gene	1264780	1265148	.	+	.	ID=gene1178;Dbxref=GeneID:1096615;Name=SCG11A.23;gbkey=Gene;gene=SCG11A.23;gene_biotype=protein_coding;gene_synonym=SCG11A.23;locus_tag=SCO1192
NC_003888.3	RefSeq	CDS	1264780	1265148	.	+	0	ID=cds1157;Parent=gene1178;Dbxref=Genbank:NP_625482.1,GeneID:1096615;Name=NP_625482.1;Note=SCG11A.23%2C hypothetical protein%2C len:122 aa%3B similar to various hypothetical proteins%2C e.g. TR:O53744 (EMBL:AL021933) Mycobacterium tuberculosis hypothetical 17.2 KD protein MTV038.03%2C 163 aa%3B fasta scores: opt: 478 z-score: 600.7 E(): 4.4e-26%3B 66.7%25 identity in 111 aa overlap;gbkey=CDS;gene=SCG11A.23;product=hypothetical protein;protein_id=NP_625482.1;transl_table=11
NC_003888.3	RefSeq	gene	1265170	1265739	.	-	.	ID=gene1179;Dbxref=GeneID:1096616;Name=SCG11A.24c;gbkey=Gene;gene=SCG11A.24c;gene_biotype=protein_coding;gene_synonym=SCG11A.24c;locus_tag=SCO1193
NC_003888.3	RefSeq	CDS	1265170	1265739	.	-	0	ID=cds1158;Parent=gene1179;Dbxref=Genbank:NP_625483.1,GeneID:1096616;Name=NP_625483.1;Note=SCG11A.24c%2C probable tetR-family transcriptional regulator%2C len: 189 aa%3B similar to TR:CAB56380 (EMBL:AL118515) Streptomyces coelicolor probable tetR-family transcriptional regulator SCD17.03%2C 226 aa%3B fasta scores: opt: 233 z-score: 295.6 E(): 4.3e-09%3B 35.2%25 identity in 176 aa overlap. Contains match to Pfam entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SCG11A.24c;product=TetR family transcriptional regulator;protein_id=NP_625483.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1265596	1265700	.	-	.	ID=id1423;Dbxref=GeneID:1096616;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 17.80%2C E-value 0.0034;gbkey=misc_feature;gene=SCG11A.24c
NC_003888.3	RefSeq	ribosome_entry_site	1265746	1265750	.	-	.	ID=id1424;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1265827	1265831	.	+	.	ID=id1425;gbkey=RBS
NC_003888.3	RefSeq	gene	1265841	1267331	.	+	.	ID=gene1180;Dbxref=GeneID:1096617;Name=SCG11A.25;gbkey=Gene;gene=SCG11A.25;gene_biotype=protein_coding;gene_synonym=SCG11A.25;locus_tag=SCO1194
NC_003888.3	RefSeq	CDS	1265841	1267331	.	+	0	ID=cds1159;Parent=gene1180;Dbxref=Genbank:NP_625484.1,GeneID:1096617;Name=NP_625484.1;Note=SCG11A.25%2C probable export protein%2C len: 496 aa%3B similar to TR:P72184 (EMBL:U51164) Propionibacterium freudenreichii membrane-bound transport protein HemX%2C 487 aa%3B fasta scores: opt: 1371 z-score: 1416.9 E(): 0%3B 47.0%25 identity in 474 aa overlap and to SW:PUR8_STRLP (EMBL:X76855) Streptomyces lipmanii (Streptomyces alboniger) puromycin resistance protein Pur8%2C 503aa%3B fasta scores: opt: 576 z-score: 598.4 E(): 5.9e-26%3B 30.2%25 identity in 493 aa overlap;gbkey=CDS;gene=SCG11A.25;product=export protein;protein_id=NP_625484.1;transl_table=11
NC_003888.3	RefSeq	gene	1267321	1267515	.	-	.	ID=gene1181;Dbxref=GeneID:1096618;Name=SCG11A.26c;gbkey=Gene;gene=SCG11A.26c;gene_biotype=protein_coding;gene_synonym=SCG11A.26c;locus_tag=SCO1195
NC_003888.3	RefSeq	CDS	1267321	1267515	.	-	0	ID=cds1160;Parent=gene1181;Dbxref=Genbank:NP_625485.1,GeneID:1096618;Name=NP_625485.1;Note=SCG11A.26c%2C membrane protein%2C len: 64 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCG11A.26c;product=hypothetical protein;protein_id=NP_625485.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1267522	1267526	.	-	.	ID=id1426;gbkey=RBS
NC_003888.3	RefSeq	gene	1267630	1268493	.	-	.	ID=gene1182;Dbxref=GeneID:1096619;Name=SCG11A.27c;gbkey=Gene;gene=SCG11A.27c;gene_biotype=protein_coding;gene_synonym=SCG11A.27c;locus_tag=SCO1196
NC_003888.3	RefSeq	CDS	1267630	1268493	.	-	0	ID=cds1161;Parent=gene1182;Dbxref=Genbank:NP_625486.1,GeneID:1096619;Name=NP_625486.1;Note=SCG11A.27c%2C hypothetical protein%2C len: 287 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCG11A.27c;product=hypothetical protein;protein_id=NP_625486.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1268500	1268504	.	-	.	ID=id1427;gbkey=RBS
NC_003888.3	RefSeq	gene	1268663	1269751	.	-	.	ID=gene1183;Dbxref=GeneID:1096620;Name=SCG11A.28c;gbkey=Gene;gene=SCG11A.28c;gene_biotype=protein_coding;gene_synonym=SCG11A.28c;locus_tag=SCO1197
NC_003888.3	RefSeq	CDS	1268663	1269751	.	-	0	ID=cds1162;Parent=gene1183;Dbxref=Genbank:NP_625487.1,GeneID:1096620;Name=NP_625487.1;Note=SCG11A.28c%2C possible acyl-CoA dehydrogenase%2C len:362 aa%3B low similarity to TR:AAD44195 (EMBL:AF142581) Streptomyces coelicolor acyl-CoA dehydrogenase AcdH%2C 386 aa%3B fasta scores: opt: 266 z-score: 294.1 E(): 5.2e-09%3B 28.3%25 identity in 392 aa overlap and to SW:ACDS_CLOAB (EMBL:U17110) Clostridium acetobutylicum acyl-CoA dehydrogenase%2C short-chain specific (EC 1.3.99.2) (ScaD) (butyryl-CoA dehydrogenase) Bcd%2C 379 aa%3B fasta scores: opt: 231 z-score: 256.5 E(): 6.5e-07%3B 26.5%25 identity in 378 aa overlap. Contains two matches to Pfam entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase;gbkey=CDS;gene=SCG11A.28c;product=acyl-CoA dehydrogenase;protein_id=NP_625487.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1268765	1269079	.	-	.	ID=id1428;Dbxref=GeneID:1096620;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 49.70%2C E-value 9.5e-14;gbkey=misc_feature;gene=SCG11A.28c
NC_003888.3	RefSeq	sequence_feature	1269458	1269721	.	-	.	ID=id1429;Dbxref=GeneID:1096620;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 53.10%2C E-value 9.4e-15;gbkey=misc_feature;gene=SCG11A.28c
NC_003888.3	RefSeq	gene	1269748	1270929	.	-	.	ID=gene1184;Dbxref=GeneID:1096621;Name=SCG11A.29c;gbkey=Gene;gene=SCG11A.29c;gene_biotype=protein_coding;gene_synonym=SCG11A.29c;locus_tag=SCO1198
NC_003888.3	RefSeq	CDS	1269748	1270929	.	-	0	ID=cds1163;Parent=gene1184;Dbxref=Genbank:NP_625488.1,GeneID:1096621;Name=NP_625488.1;Note=SCG11A.29c%2C probable acyl-CoA dehydrogenase%2C len:393 aa%3B similar to TR:Q54857 (EMBL:) Streptomyces purpurascens acyl-CoA dehydrogenase FamB (fragment)%2C 288 aa%3B fasta scores: opt: 1195 z-score: 1377.5 E(): 0%3B 83.2%25 identity in 208 aa overlap and to SW:ACD_MYCLE (EMBL:U00012) Mycobacterium leprae acyl-CoA dehydrogenase (EC 1.3.99.-) Acd or B1308_F1_34%2C 389 aa%3B fasta scores: opt: 386 z-score: 447.1 E(): 1.6e-17%3B 28.5%25 identity in 376 aa overlap. Contains two matches to Pfam entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase;gbkey=CDS;gene=SCG11A.29c;product=acyl-CoA dehydrogenase;protein_id=NP_625488.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1269823	1269879	.	-	.	ID=id1430;Dbxref=GeneID:1096621;Note=PS00095 C-5 cytosine-specific DNA methylases C-terminal signature;gbkey=misc_feature;gene=SCG11A.29c
NC_003888.3	RefSeq	sequence_feature	1270213	1270320	.	-	.	ID=id1431;Dbxref=GeneID:1096621;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 14.30%2C E-value 0.0022;gbkey=misc_feature;gene=SCG11A.29c
NC_003888.3	RefSeq	sequence_feature	1270375	1270674	.	-	.	ID=id1432;Dbxref=GeneID:1096621;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 106.30%2C E-value 2.3e-30;gbkey=misc_feature;gene=SCG11A.29c
NC_003888.3	RefSeq	gene	1270926	1271906	.	-	.	ID=gene1185;Dbxref=GeneID:1096622;Name=SCG11A.30c;gbkey=Gene;gene=SCG11A.30c;gene_biotype=protein_coding;gene_synonym=SCG11A.30c;locus_tag=SCO1199
NC_003888.3	RefSeq	CDS	1270926	1271906	.	-	0	ID=cds1164;Parent=gene1185;Dbxref=Genbank:NP_625489.1,GeneID:1096622;Name=NP_625489.1;Note=SCG11A.30c%2C probable oxidoreductase%2C len: 326 aa%3B highly similar to TR:Q54856 (EMBL:X61931) Streptomyces purpurascens famA (FAS domain)%2C 230 aa%3B fasta scores: opt: 1015 z-score: 1089.1 E(): 0%3B 79.5%25 identity in 239 aa overlap and to SW:QOR_PSEAE (EMBL:X85015) Pseudomonas aeruginosa quinone oxidoreductase (EC 1.6.5.5) (NADH:quinone reductase) Qor%2C 325 aa%3B fasta scores: opt: 446 z-score: 482.5 E(): 1.7e-19%3B 34.1%25 identity in 323 aa overlap. Contains match to Pfam entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and match to Prosite entry PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=CDS;gene=SCG11A.30c;product=oxidoreductase;protein_id=NP_625489.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1270937	1270940	.	-	.	ID=id1433;Dbxref=GeneID:1096622;gbkey=RBS;gene=SCG11A.30c
NC_003888.3	RefSeq	sequence_feature	1270959	1271867	.	-	.	ID=id1434;Dbxref=GeneID:1096622;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 36.80%2C E-value 1e-11;gbkey=misc_feature;gene=SCG11A.30c
NC_003888.3	RefSeq	sequence_feature	1271445	1271510	.	-	.	ID=id1435;Dbxref=GeneID:1096622;Note=PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=misc_feature;gene=SCG11A.30c
NC_003888.3	RefSeq	ribosome_entry_site	1271913	1271917	.	-	.	ID=id1436;gbkey=RBS
NC_003888.3	RefSeq	gene	1271991	1272566	.	-	.	ID=gene1186;Dbxref=GeneID:1096623;Name=SCG11A.31c;gbkey=Gene;gene=SCG11A.31c;gene_biotype=protein_coding;gene_synonym=SCG11A.31c;locus_tag=SCO1200
NC_003888.3	RefSeq	CDS	1271991	1272566	.	-	0	ID=cds1165;Parent=gene1186;Dbxref=Genbank:NP_625490.1,GeneID:1096623;Name=NP_625490.1;Note=SCG11A.31c%2C probable regulatory protein%2C len 191 aa%3B similar to TR:Q54855 (EMBL:X61931) Streptomyces purpurascens ORF1%2C 90 aa%3B fasta scores: opt: 560 z-score: 686.7 E(): 7.2e-31%3B 85.6%25 identity in 90 aa overlap and to TR:CAB39703 (EMBL:AL049485) Streptomyces coelicolor  DNA-binding protein SC6A5.19%2C 204 aa%3B fasta scores: opt: 382 z-score: 468.0 E(): 1.1e-18%3B 39.2%25 identity in 176 aa overlap and to Streptomyces coelicolor SC6G4.21%2C fasta scores: opt: 717 z-score: 721.2 E(): 8e-35%3B 60.0%25 identity in 190 aa overlap. Contains match to Pfam entry PF01381 HTH_3%2C Helix-turn-helix and a predicted possible motif at residues 25..46 (+6.09 SD);gbkey=CDS;gene=SCG11A.31c;product=regulatory protein;protein_id=NP_625490.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1272360	1272524	.	-	.	ID=id1437;Dbxref=GeneID:1096623;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 59.00%2C E-value 9.9e-14;gbkey=misc_feature;gene=SCG11A.31c
NC_003888.3	RefSeq	ribosome_entry_site	1272631	1272635	.	+	.	ID=id1438;gbkey=RBS
NC_003888.3	RefSeq	gene	1272644	1273609	.	+	.	ID=gene1187;Dbxref=GeneID:1096624;Name=2SCG58.01;gbkey=Gene;gene=2SCG58.01;gene_biotype=protein_coding;gene_synonym=2SCG58.01,SCG11A.32;locus_tag=SCO1201
NC_003888.3	RefSeq	CDS	1272644	1273609	.	+	0	ID=cds1166;Parent=gene1187;Dbxref=Genbank:NP_733526.1,GeneID:1096624;Name=NP_733526.1;Note=2SCG58.01%2C possible reductase (fragment)%2C len: >43 aa%3B C-terminal part of TR:Q9RJW9 (EMBL:AL133210) Streptomyces coelicolor  reductase (fragment) SCF37.32%2C 311 aa~SCG11A.32%2C possible reductase%2C len: >310 aa%3B similar to TR:Q9Z9W3 (EMBL:AB011836) Bacillus sp. (strain C-125) alkyl hydroperoxide reductase large subunit (EC 1.6.99.3) AhpF%2C 305 aa%3B fasta scores: opt: 668 z-score: 747.2 E(): 0%3B 37.3%25 identity in 295 aa overlap and to SW:AHPF_PSEPU (EMBL:AB010689) Pseudomonas putida alkyl hydroperoxide reductase subunit F (EC 1.6.4.-) AhpF%2C 520 aa%3B fasta scores: opt: 338 z-score: 378.9 E(): 9.9e-14%3B 28.6%25 identity in 308 aa overlap;gbkey=CDS;gene=2SCG58.01;product=reductase;protein_id=NP_733526.1;transl_table=11
NC_003888.3	RefSeq	gene	1273700	1275238	.	+	.	ID=gene1188;Dbxref=GeneID:1096625;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=2SCG58.02;locus_tag=SCO1202
NC_003888.3	RefSeq	CDS	1273700	1275238	.	+	0	ID=cds1167;Parent=gene1188;Dbxref=Genbank:NP_625491.1,GeneID:1096625;Name=NP_625491.1;Note=catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA;gbkey=CDS;gene=ligB;product=ATP-dependent DNA ligase;protein_id=NP_625491.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1274246	1275166	.	+	.	ID=id1439;Dbxref=GeneID:1096625;Note=Pfam match to entry PF01068 DNA_ligase%2C DNA ligase%2C score 354.70%2C E-value 1e-102;gbkey=misc_feature;gene=ligB
NC_003888.3	RefSeq	sequence_feature	1274321	1274347	.	+	.	ID=id1440;Dbxref=GeneID:1096625;Note=PS00697 ATP-dependent DNA ligase AMP-binding site;gbkey=misc_feature;gene=ligB
NC_003888.3	RefSeq	gene	1275235	1275696	.	+	.	ID=gene1189;Dbxref=GeneID:1096626;Name=2SCG58.03;gbkey=Gene;gene=2SCG58.03;gene_biotype=protein_coding;gene_synonym=2SCG58.03;locus_tag=SCO1203
NC_003888.3	RefSeq	CDS	1275235	1275696	.	+	0	ID=cds1168;Parent=gene1189;Dbxref=Genbank:NP_625492.1,GeneID:1096626;Name=NP_625492.1;Note=2SCG58.03%2C possible MutT-like protein%2C len: 153 aa%3B similar to TR:CAB88476 (EMBL:AL353816) Streptomyces coelicolor  MutT-like protein SCD84.10c%2C 142 aa%3B fasta scores: opt: 135 z-score: 171.1 E(): 0.046%3B 33.3%25 identity in 129 aa overlap. Contains match to Prosite entry PS00893 mutT domain signature;gbkey=CDS;gene=2SCG58.03;product=MutT-like protein;protein_id=NP_625492.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1275361	1275420	.	+	.	ID=id1441;Dbxref=GeneID:1096626;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=2SCG58.03
NC_003888.3	RefSeq	ribosome_entry_site	1275819	1275824	.	+	.	ID=id1442;gbkey=RBS
NC_003888.3	RefSeq	gene	1275830	1277215	.	+	.	ID=gene1190;Dbxref=GeneID:1096627;Name=gabD1;gbkey=Gene;gene=gabD1;gene_biotype=protein_coding;gene_synonym=2SCG58.04;locus_tag=SCO1204
NC_003888.3	RefSeq	CDS	1275830	1277215	.	+	0	ID=cds1169;Parent=gene1190;Dbxref=Genbank:NP_625493.1,GeneID:1096627;Name=NP_625493.1;Note=NADP-dependent semialdehyde dehydrogenase%3B part of alternative pathway from alpha-ketoglutarate to succinate;gbkey=CDS;gene=gabD1;product=succinic semialdehyde dehydrogenase;protein_id=NP_625493.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1275830	1277212	.	+	.	ID=id1443;Dbxref=GeneID:1096627;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 437.70%2C E-value 9.9e-128;gbkey=misc_feature;gene=gabD1
NC_003888.3	RefSeq	gene	1277253	1277477	.	+	.	ID=gene1191;Dbxref=GeneID:1096628;Name=2SCG58.05;gbkey=Gene;gene=2SCG58.05;gene_biotype=protein_coding;gene_synonym=2SCG58.05;locus_tag=SCO1205
NC_003888.3	RefSeq	CDS	1277253	1277477	.	+	0	ID=cds1170;Parent=gene1191;Dbxref=Genbank:NP_625494.1,GeneID:1096628;Name=NP_625494.1;Note=2SCG58.05%2C unknown%2C len: 74 aa;gbkey=CDS;gene=2SCG58.05;product=hypothetical protein;protein_id=NP_625494.1;transl_table=11
NC_003888.3	RefSeq	gene	1277625	1278749	.	+	.	ID=gene1192;Dbxref=GeneID:1096629;Name=2SCG58.06;gbkey=Gene;gene=2SCG58.06;gene_biotype=protein_coding;gene_synonym=2SCG58.06;locus_tag=SCO1206
NC_003888.3	RefSeq	CDS	1277625	1278749	.	+	0	ID=cds1171;Parent=gene1192;Dbxref=Genbank:NP_625495.1,GeneID:1096629;Name=NP_625495.1;Note=2SCG58.06%2C possible polyketide synthase%2C len: 374 aa%3B highly similar to TR:Q54240 (EMBL:AB018074) Streptomyces griseus ORF-1 protein similar to chalcone synthase%2C 372 aa%3B fasta scores: opt: 1769 z-score: 1998.4 E(): 0%3B 70.4%25 identity in 361 aa overlap and to SW:CHSJ_PETHY (EMBL:X14597) Petunia hybrida chalcone synthase J (EC 2.3.1.74) ChsJ%2C 389 aa%3B fasta scores: opt: 412 z-score: 469.3 E(): 1.1e-18%3B 29.5%25 identity in 312 aa overlap. Contains Pfam match to entry PF00195 Chal_stil_synt%2C Chalcone and stilbene synthases;gbkey=CDS;gene=2SCG58.06;product=1%2C3%2C6%2C8-tetrahydroxynaphthalene synthase;protein_id=NP_625495.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1277742	1278644	.	+	.	ID=id1444;Dbxref=GeneID:1096629;Note=Pfam match to entry PF00195 Chal_stil_synt%2C Chalcone and stilbene synthases%2C score 117.50%2C E-value 1.4e-33;gbkey=misc_feature;gene=2SCG58.06
NC_003888.3	RefSeq	ribosome_entry_site	1278737	1278740	.	+	.	ID=id1445;Dbxref=GeneID:1096629;gbkey=RBS;gene=2SCG58.06
NC_003888.3	RefSeq	gene	1278746	1279960	.	+	.	ID=gene1193;Dbxref=GeneID:1096630;Name=2SCG58.07;gbkey=Gene;gene=2SCG58.07;gene_biotype=protein_coding;gene_synonym=2SCG58.07;locus_tag=SCO1207
NC_003888.3	RefSeq	CDS	1278746	1279960	.	+	0	ID=cds1172;Parent=gene1193;Dbxref=Genbank:NP_625496.1,GeneID:1096630;Name=NP_625496.1;Note=2SCG58.07%2C probable cytochrome P450%2C len: 404 aa%3B similar to SW:CPXF_STRGO (EMBL:M32239) Streptomyces griseolus cytochrome P450-Su2 (EC 1.14.-.-) SubC%2C 402 aa%3B fasta scores: opt: 791 z-score: 895.3 E(): 0%3B 37.1%25 identity in 412 aa overlap and to TR:CAB88975 (EMBL:AL353864) Streptomyces coelicolor cytochrome P450 SC8F11.24c%2C 407 aa%3B fasta scores: opt: 1736 z-score: 1959.5 E(): 0%3B 61.2%25 identity in 407 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450 and match to Prosite entry PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=CDS;gene=2SCG58.07;product=cytochrome P450;protein_id=NP_625496.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1279028	1279912	.	+	.	ID=id1446;Dbxref=GeneID:1096630;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 144.70%2C E-value 4e-40;gbkey=misc_feature;gene=2SCG58.07
NC_003888.3	RefSeq	sequence_feature	1279781	1279810	.	+	.	ID=id1447;Dbxref=GeneID:1096630;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=2SCG58.07
NC_003888.3	RefSeq	gene	1279957	1280490	.	+	.	ID=gene1194;Dbxref=GeneID:1096631;Name=2SCG58.08;gbkey=Gene;gene=2SCG58.08;gene_biotype=protein_coding;gene_synonym=2SCG58.08;locus_tag=SCO1208
NC_003888.3	RefSeq	CDS	1279957	1280490	.	+	0	ID=cds1173;Parent=gene1194;Dbxref=Genbank:NP_625497.1,GeneID:1096631;Name=NP_625497.1;Note=2SCG58.08%2C hypothetical protein%2C len: 177 aa%3B similar to TR:CAB92104 (EMBL:AL356334) Streptomyces coelicolor hypothetical 21.7 kD protein SCD69.03%2C 200 aa%3B fasta scores: opt: 195 z-score: 238.2 E(): 8.4e-06%3B 31.7%25 identity in 164 aa overlap;gbkey=CDS;gene=2SCG58.08;product=hypothetical protein;protein_id=NP_625497.1;transl_table=11
NC_003888.3	RefSeq	gene	1280487	1281713	.	-	.	ID=gene1195;Dbxref=GeneID:1096632;Name=2SCG58.09c;gbkey=Gene;gene=2SCG58.09c;gene_biotype=protein_coding;gene_synonym=2SCG58.09c;locus_tag=SCO1209
NC_003888.3	RefSeq	CDS	1280487	1281713	.	-	0	ID=cds1174;Parent=gene1195;Dbxref=Genbank:NP_625498.1,GeneID:1096632;Name=NP_625498.1;Note=2SCG58.09c%2C probable acyl-CoA dehydrogenase%2C len: 408 aa%3B similar to SW:ACDA_BACSU (EMBL:Z49782) Bacillus subtilis acyl-CoA dehydrogenase (EC 1.3.99.-) AcdA%2C 379 aa%3B fasta scores: opt: 512 z-score: 587.6 E(): 2.9e-25%3B 41.3%25 identity in 400 aa overlap. Contains 2x Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and match to Prosite entry PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=CDS;gene=2SCG58.09c;product=acyl-CoA dehydrogenase;protein_id=NP_625498.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1280514	1280939	.	-	.	ID=id1448;Dbxref=GeneID:1096632;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 208.00%2C E-value 3.4e-60;gbkey=misc_feature;gene=2SCG58.09c
NC_003888.3	RefSeq	sequence_feature	1280574	1280633	.	-	.	ID=id1449;Dbxref=GeneID:1096632;Note=PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=misc_feature;gene=2SCG58.09c
NC_003888.3	RefSeq	sequence_feature	1281015	1281692	.	-	.	ID=id1450;Dbxref=GeneID:1096632;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 170.00%2C E-value 4.8e-49;gbkey=misc_feature;gene=2SCG58.09c
NC_003888.3	RefSeq	ribosome_entry_site	1281718	1281722	.	-	.	ID=id1451;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1281875	1281878	.	+	.	ID=id1452;gbkey=RBS
NC_003888.3	RefSeq	gene	1281884	1282540	.	+	.	ID=gene1196;Dbxref=GeneID:1096633;Name=2SCG58.10;gbkey=Gene;gene=2SCG58.10;gene_biotype=protein_coding;gene_synonym=2SCG58.10;locus_tag=SCO1210
NC_003888.3	RefSeq	CDS	1281884	1282540	.	+	0	ID=cds1175;Parent=gene1196;Dbxref=Genbank:NP_625499.1,GeneID:1096633;Name=NP_625499.1;Note=2SCG58.10%2C probable transcriptional regulatory protein%2C len: 218 aa%3B similar to TR:O53757 (EMBL:AL021933) Mycobacterium tuberculosis regulatory protein MTV038.16c%2C 234 aa%3B fasta scores: opt: 214 z-score: 258.1 E(): 6.5e-07%3B 30.7%25 identity in 199 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 35..56 (+3.27 SD);gbkey=CDS;gene=2SCG58.10;product=transcriptional regulator;protein_id=NP_625499.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1281941	1282078	.	+	.	ID=id1453;Dbxref=GeneID:1096633;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 52.90%2C E-value 4.2e-12;gbkey=misc_feature;gene=2SCG58.10
NC_003888.3	RefSeq	gene	1282582	1283235	.	-	.	ID=gene1197;Dbxref=GeneID:1096634;Name=2SCG58.11c;gbkey=Gene;gene=2SCG58.11c;gene_biotype=protein_coding;gene_synonym=2SCG58.11c;locus_tag=SCO1211
NC_003888.3	RefSeq	CDS	1282582	1283235	.	-	0	ID=cds1176;Parent=gene1197;Dbxref=Genbank:NP_625500.1,GeneID:1096634;Name=NP_625500.1;Note=2SCG58.11c%2C probable polypeptide deformylase%2C len: 217 aa%3B similar to SW:DEF_STRCO (EMBL:AL078618) Streptomyces coelicolor polypeptide deformylase (EC 3.5.1.31) Def or SC10A7.23%2C 208 aa%3B fasta scores: opt: 594 z-score: 712.9 E(): 3.1e-32%3B 54.2%25 identity in 166 aa overlap and to SW:DEF_ECOLI (EMBL:X77800) Escherichia coli polypeptide deformylase (EC 3.5.1.31) Def%2C 168 aa%3B fasta scores: opt: 321 z-score: 391.3 E(): 2.5e-14%3B 34.2%25 identity in 155 aa overlap. Contains Pfam match to entry PF01327 Pep_deformylase%2C Polypeptide deformylase;gbkey=CDS;gene=2SCG58.11c;product=polypeptide deformylase;protein_id=NP_625500.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1282654	1283079	.	-	.	ID=id1454;Dbxref=GeneID:1096634;Note=Pfam match to entry PF01327 Pep_deformylase%2C Polypeptide deformylase%2C score 171.50%2C E-value 1.4e-47;gbkey=misc_feature;gene=2SCG58.11c
NC_003888.3	RefSeq	ribosome_entry_site	1283283	1283288	.	+	.	ID=id1455;gbkey=RBS
NC_003888.3	RefSeq	gene	1283300	1284538	.	+	.	ID=gene1198;Dbxref=GeneID:1096635;Name=2SCG58.12;gbkey=Gene;gene=2SCG58.12;gene_biotype=protein_coding;gene_synonym=2SCG58.12;locus_tag=SCO1212
NC_003888.3	RefSeq	CDS	1283300	1284538	.	+	0	ID=cds1177;Parent=gene1198;Dbxref=Genbank:NP_625501.1,GeneID:1096635;Name=NP_625501.1;Note=2SCG58.12%2C possible ligase%2C len: 412 aa%3B similar to TR:Q9ZGG7 (EMBL:AF080002) Heliobacillus mobilis UDP-N-acetylmuramyl tripeptide synthetase MurC%2C 455 aa%3B fasta scores: opt: 261 z-score: 287.4 E(): 1.5e-08%3B 29.3%25 identity in 441 aa overlap. Contains Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family;gbkey=CDS;gene=2SCG58.12;product=ligase;protein_id=NP_625501.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1283474	1284223	.	+	.	ID=id1456;Dbxref=GeneID:1096635;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C score 32.70%2C E-value 4.3e-09;gbkey=misc_feature;gene=2SCG58.12
NC_003888.3	RefSeq	gene	1284562	1285290	.	+	.	ID=gene1199;Dbxref=GeneID:1096636;Name=2SCG58.13;gbkey=Gene;gene=2SCG58.13;gene_biotype=protein_coding;gene_synonym=2SCG58.13;locus_tag=SCO1213
NC_003888.3	RefSeq	CDS	1284562	1285290	.	+	0	ID=cds1178;Parent=gene1199;Dbxref=Genbank:NP_625502.1,GeneID:1096636;Name=NP_625502.1;Note=2SCG58.13%2C hypotetical protein%2C len: 242 aa%3B similar to TR:Q9ZGG8 (EMBL:AF080002) Heliobacillus mobilis cobyric acid synthase CobQ%2C 252 aa%3B fasta scores: opt: 505 z-score: 574.8 E(): 1.5e-24%3B 39.5%25 identity in 238 aa overlap;gbkey=CDS;gene=2SCG58.13;product=hypothetical protein;protein_id=NP_625502.1;transl_table=11
NC_003888.3	RefSeq	gene	1285457	1286482	.	+	.	ID=gene1200;Dbxref=GeneID:1096637;Name=2SCG58.14;gbkey=Gene;gene=2SCG58.14;gene_biotype=protein_coding;gene_synonym=2SCG58.14,pfkA3;locus_tag=SCO1214
NC_003888.3	RefSeq	CDS	1285457	1286482	.	+	0	ID=cds1179;Parent=gene1200;Dbxref=Genbank:NP_625503.1,GeneID:1096637;Name=NP_625503.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;gene=2SCG58.14;product=6-phosphofructokinase;protein_id=NP_625503.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1285460	1286356	.	+	.	ID=id1457;Dbxref=GeneID:1096637;Note=Pfam match to entry PF00365 PFK%2C Phosphofructokinase%2C score 320.60%2C E-value 4.5e-117;gbkey=misc_feature;gene=2SCG58.14
NC_003888.3	RefSeq	sequence_feature	1286252	1286308	.	+	.	ID=id1458;Dbxref=GeneID:1096637;Note=PS00433 Phosphofructokinase signature;gbkey=misc_feature;gene=2SCG58.14
NC_003888.3	RefSeq	ribosome_entry_site	1286663	1286668	.	+	.	ID=id1459;gbkey=RBS
NC_003888.3	RefSeq	gene	1286676	1287626	.	+	.	ID=gene1201;Dbxref=GeneID:1096638;Name=2SCG58.15;gbkey=Gene;gene=2SCG58.15;gene_biotype=protein_coding;gene_synonym=2SCG58.15;locus_tag=SCO1215
NC_003888.3	RefSeq	CDS	1286676	1287626	.	+	0	ID=cds1180;Parent=gene1201;Dbxref=Genbank:NP_625504.1,GeneID:1096638;Name=NP_625504.1;Note=2SCG58.15%2C possible integral membrane protein%2C len: 316 aa%3B similar to SW:CTAG_BACSU (EMBL:Z98682) Bacillus subtilis CtaG protein%2C 297 aa%3B fasta scores: opt: 139 z-score: 169.9 E(): 0.053%3B 24.7%25 identity in 292 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG58.15;product=hypothetical protein;protein_id=NP_625504.1;transl_table=11
NC_003888.3	RefSeq	gene	1287637	1287840	.	+	.	ID=gene1202;Dbxref=GeneID:1096639;Name=2SCG58.16;gbkey=Gene;gene=2SCG58.16;gene_biotype=protein_coding;gene_synonym=2SCG58.16;locus_tag=SCO1216
NC_003888.3	RefSeq	CDS	1287637	1287840	.	+	0	ID=cds1181;Parent=gene1202;Dbxref=Genbank:NP_625505.1,GeneID:1096639;Name=NP_625505.1;Note=2SCG58.16%2C possible integral membrane protein%2C len: 67 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG58.16;product=hypothetical protein;protein_id=NP_625505.1;transl_table=11
NC_003888.3	RefSeq	gene	1287879	1289096	.	-	.	ID=gene1203;Dbxref=GeneID:1096640;Name=2SCG58.17c;gbkey=Gene;gene=2SCG58.17c;gene_biotype=protein_coding;gene_synonym=2SCG58.17c;locus_tag=SCO1217
NC_003888.3	RefSeq	CDS	1287879	1289096	.	-	0	ID=cds1182;Parent=gene1203;Dbxref=Genbank:NP_625506.1,GeneID:1096640;Name=NP_625506.1;Note=2SCG58.17c%2C possible sensor kinase%2C len: 405 aa%3B similar to TR:AAF31453 (EMBL:AF221126) Streptococcus pneumoniae histidine kinase ZmpS%2C 563 aa%3B fasta scores: opt: 375 z-score: 453.5 E(): 8.6e-18%3B 26.7%25 identity in 363 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase and possible N-terminal region signal peptide sequence (possibly cleavable);gbkey=CDS;gene=2SCG58.17c;product=sensor kinase;protein_id=NP_625506.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1287927	1288526	.	-	.	ID=id1460;Dbxref=GeneID:1096640;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score -31.20%2C E-value 0.0023;gbkey=misc_feature;gene=2SCG58.17c
NC_003888.3	RefSeq	gene	1289093	1290928	.	-	.	ID=gene1204;Dbxref=GeneID:1096641;Name=2SCG58.18c;gbkey=Gene;gene=2SCG58.18c;gene_biotype=protein_coding;gene_synonym=2SCG58.18c;locus_tag=SCO1218
NC_003888.3	RefSeq	CDS	1289093	1290928	.	-	0	ID=cds1183;Parent=gene1204;Dbxref=Genbank:NP_625507.1,GeneID:1096641;Name=NP_625507.1;Note=2SCG58.18c%2C possible transmembrane transport protein%2C len: 611 aa%3B similar to TR:Q9RX38 (EMBL:AE001907) Deinococcus radiodurans sodium:solute symporter protein DR0477%2C 528 aa%3B fasta scores: opt: 379 z-score: 407.0 E(): 3.3e-15%3B 30.5%25 identity in 564 aa overlap. Contains Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family and match to Prosite entry PS00457 Sodium:solute symporter family signature 2. Also contains possible hydrophobic membrane spanning regions and 4x conserved repeat unit: RTDLL;gbkey=CDS;gene=2SCG58.18c;product=transmembrane transport protein;protein_id=NP_625507.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1289105	1289110	.	-	.	ID=id1461;Dbxref=GeneID:1096641;gbkey=RBS;gene=2SCG58.18c
NC_003888.3	RefSeq	repeat_region	1289159	1289218	.	-	.	ID=id1462;Dbxref=GeneID:1096641;Note=4x conserved repeat unit translated in SCG58.18c;gbkey=repeat_region;gene=2SCG58.18c
NC_003888.3	RefSeq	sequence_feature	1289435	1289497	.	-	.	ID=id1463;Dbxref=GeneID:1096641;Note=PS00457 Sodium:solute symporter family signature 2;gbkey=misc_feature;gene=2SCG58.18c
NC_003888.3	RefSeq	sequence_feature	1289441	1290829	.	-	.	ID=id1464;Dbxref=GeneID:1096641;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score 22.70%2C E-value 1.3e-08;gbkey=misc_feature;gene=2SCG58.18c
NC_003888.3	RefSeq	gene	1290957	1291352	.	-	.	ID=gene1205;Dbxref=GeneID:1096642;Name=2SCG58.19c;gbkey=Gene;gene=2SCG58.19c;gene_biotype=protein_coding;gene_synonym=2SCG58.19c;locus_tag=SCO1219
NC_003888.3	RefSeq	CDS	1290957	1291352	.	-	0	ID=cds1184;Parent=gene1205;Dbxref=Genbank:NP_625508.1,GeneID:1096642;Name=NP_625508.1;Note=2SCG58.19c%2C possible integral membrane protein%2C len: 131 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG58.19c;product=hypothetical protein;protein_id=NP_625508.1;transl_table=11
NC_003888.3	RefSeq	gene	1291356	1292117	.	-	.	ID=gene1206;Dbxref=GeneID:1096643;Name=2SCG58.20c;gbkey=Gene;gene=2SCG58.20c;gene_biotype=protein_coding;gene_synonym=2SCG58.20c;locus_tag=SCO1220
NC_003888.3	RefSeq	CDS	1291356	1292117	.	-	0	ID=cds1185;Parent=gene1206;Dbxref=Genbank:NP_625509.1,GeneID:1096643;Name=NP_625509.1;Note=2SCG58.20c%2C probable regulatory protein%2C len: 253 aa%3B similar to SW:ALGR_PSEAE (EMBL:M23230) Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR%2C 248 aa%3B fasta scores: opt: 384 z-score: 457.3 E(): 5.3e-18%3B 36.5%25 identity in 255 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain;gbkey=CDS;gene=2SCG58.20c;product=regulatory protein;protein_id=NP_625509.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1291362	1291366	.	-	.	ID=id1465;Dbxref=GeneID:1096643;gbkey=RBS;gene=2SCG58.20c
NC_003888.3	RefSeq	sequence_feature	1291752	1292114	.	-	.	ID=id1466;Dbxref=GeneID:1096643;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 90.60%2C E-value 3.2e-23;gbkey=misc_feature;gene=2SCG58.20c
NC_003888.3	RefSeq	gene	1292195	1292698	.	+	.	ID=gene1207;Dbxref=GeneID:1096644;Name=2SCG58.21;gbkey=Gene;gene=2SCG58.21;gene_biotype=protein_coding;gene_synonym=2SCG58.21;locus_tag=SCO1221
NC_003888.3	RefSeq	CDS	1292195	1292698	.	+	0	ID=cds1186;Parent=gene1207;Dbxref=Genbank:NP_625510.1,GeneID:1096644;Name=NP_625510.1;Note=2SCG58.21%2C possible AsnC-family regulatory protein%2C len: 167 aa%3B similar to SW:PUTR_RHOCA (EMBL:X78346) Rhodobacter capsulatus proline dehydrogenase transcriptional activator PutR%2C 154 aa%3B fasta scores: opt: 248 z-score: 311.6 E(): 6.9e-10%3B 31.3%25 identity in 147 aa overlap. Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family;gbkey=CDS;gene=2SCG58.21;product=transcription regulator AsnC;protein_id=NP_625510.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1292288	1292590	.	+	.	ID=id1467;Dbxref=GeneID:1096644;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 66.80%2C E-value 4.5e-16;gbkey=misc_feature;gene=2SCG58.21
NC_003888.3	RefSeq	ribosome_entry_site	1292810	1292815	.	+	.	ID=id1468;gbkey=RBS
NC_003888.3	RefSeq	gene	1292824	1293690	.	+	.	ID=gene1208;Dbxref=GeneID:1096645;Name=2SCG58.22;gbkey=Gene;gene=2SCG58.22;gene_biotype=protein_coding;gene_synonym=2SCG58.22;locus_tag=SCO1222
NC_003888.3	RefSeq	CDS	1292824	1293690	.	+	0	ID=cds1187;Parent=gene1208;Dbxref=Genbank:NP_625511.1,GeneID:1096645;Name=NP_625511.1;Note=2SCG58.22%2C conserved hypothetical protein%2C len: 288 aa%3B similar to TR:P71889 (EMBL:Z79702) Mycobacterium tuberculosis hypothetical 33.0 kD protein MTCY3G12.11%2C 302 aa%3B fasta scores: opt: 561 z-score: 623.2 E(): 3e-27%3B 47.0%25 identity in 279 aa overlap;gbkey=CDS;gene=2SCG58.22;product=hypothetical protein;protein_id=NP_625511.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1293675	1293678	.	+	.	ID=id1469;Dbxref=GeneID:1096645;gbkey=RBS;gene=2SCG58.22
NC_003888.3	RefSeq	gene	1293687	1294910	.	+	.	ID=gene1209;Dbxref=GeneID:1096646;Name=2SCG58.23;gbkey=Gene;gene=2SCG58.23;gene_biotype=protein_coding;gene_synonym=2SCG58.23,rocD;locus_tag=SCO1223
NC_003888.3	RefSeq	CDS	1293687	1294910	.	+	0	ID=cds1188;Parent=gene1209;Dbxref=Genbank:NP_625512.1,GeneID:1096646;Name=NP_625512.1;Note=2SCG58.23%2C rocD%2C ornithine aminotransferase%2C len: 407 aa%3B highly similar to SW:OAT_BACSU (EMBL:X81802) Bacillus subtilis ornithine aminotransferase (EC 2.6.1.13) RocD%2C 401 aa%3B fasta scores: opt: 1356 z-score: 1462.1 E(): 0%3B 50.4%25 identity in 395 aa overlap. Contains Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate and match to Prosite entry PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=CDS;gene=2SCG58.23;product=ornithine aminotransferase;protein_id=NP_625512.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1293798	1294847	.	+	.	ID=id1470;Dbxref=GeneID:1096646;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 426.50%2C E-value 8.5e-148;gbkey=misc_feature;gene=2SCG58.23
NC_003888.3	RefSeq	sequence_feature	1294374	1294487	.	+	.	ID=id1471;Dbxref=GeneID:1096646;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=2SCG58.23
NC_003888.3	RefSeq	gene	1294926	1295384	.	-	.	ID=gene1210;Dbxref=GeneID:1096647;Name=2SCG58.24c;gbkey=Gene;gene=2SCG58.24c;gene_biotype=protein_coding;gene_synonym=2SCG58.24c;locus_tag=SCO1224
NC_003888.3	RefSeq	CDS	1294926	1295384	.	-	0	ID=cds1189;Parent=gene1210;Dbxref=Genbank:NP_625513.1,GeneID:1096647;Name=NP_625513.1;Note=2SCG58.24c%2C possible sugar-phosphate isomerase%2C len: 152 aa%3B similar to SW:RPIB_ECOLI (EMBL:X82203) Escherichia coli ribose 5-phosphate isomerase B (EC 5.3.1.6) RpiB%2C 149 aa%3B fasta scores: opt: 248 z-score: 314.7 E(): 4.6e-10%3B 36.6%25 identity in 134 aa overlap;gbkey=CDS;gene=2SCG58.24c;product=sugar-phosphate isomerase;protein_id=NP_625513.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1295513	1295516	.	+	.	ID=id1472;gbkey=RBS
NC_003888.3	RefSeq	gene	1295526	1297040	.	+	.	ID=gene1211;Dbxref=GeneID:1096648;Name=2SCG58.25;gbkey=Gene;gene=2SCG58.25;gene_biotype=protein_coding;gene_synonym=2SCG58.25;locus_tag=SCO1225
NC_003888.3	RefSeq	CDS	1295526	1297040	.	+	0	ID=cds1190;Parent=gene1211;Dbxref=Genbank:NP_625514.1,GeneID:1096648;Name=NP_625514.1;Note=2SCG58.25%2C probable osmoprotectant transporter%2C len: 504 aa%3B similar to SW:PROP_ECOLI (EMBL:M83089) Escherichia coli proline/betaine transporter ProP%2C 500 aa%3B fasta scores: opt: 1534 z-score: 1728.8 E(): 0%3B 44.7%25 identity in 465 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and matches to Prosite entries PS00217 Sugar transport proteins signature 2 and PS00216 Sugar transport proteins signature 1. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG58.25;product=osmoprotectant transporter;protein_id=NP_625514.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1295685	1296980	.	+	.	ID=id1473;Dbxref=GeneID:1096648;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 195.80%2C E-value 6.8e-55;gbkey=misc_feature;gene=2SCG58.25
NC_003888.3	RefSeq	sequence_feature	1296018	1296095	.	+	.	ID=id1474;Dbxref=GeneID:1096648;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=2SCG58.25
NC_003888.3	RefSeq	sequence_feature	1296561	1296611	.	+	.	ID=id1475;Dbxref=GeneID:1096648;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=2SCG58.25
NC_003888.3	RefSeq	stem_loop	1297057	1297109	.	+	.	ID=id1476;Note=possible stem loop. Score 75: 25/25 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1297131	1300331	.	-	.	ID=gene1212;Dbxref=GeneID:1096649;Name=2SCG1.01c;gbkey=Gene;gene=2SCG1.01c;gene_biotype=protein_coding;gene_synonym=2SCG1.01c,2SCG58.26c;locus_tag=SCO1226
NC_003888.3	RefSeq	CDS	1297131	1300331	.	-	0	ID=cds1191;Parent=gene1212;Dbxref=Genbank:NP_733527.1,GeneID:1096649;Name=NP_733527.1;Note=2SCG1.01c%2C possible  metallopeptidase (fragment)%2C len: >385 aa%3B similar to TR:CAB76001 (EMBL:AL157916) Streptomyces coelicolor neutral zinc metallopeptidase SC3D11.04c%2C 684 aa%3B fasta scores: opt: 504 z-score: 545.2 E(): 6.7e-23%3B 35.2%25 identity in 406 aa overlap. Contains match to Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature. Also contains possible N-terminal region signal peptide sequence~2SCG58.26c%2C possible bifunctional protein (fragment)%2C len: >713 aa%3B middle region highly similar to SW:APX_STRGR Streptomyces griseus aminopeptidase (EC 3.4.11.-) SgaP%2C 284 aa%3B fasta scores: opt: 967 z-score: 978.8 E(): 0%3B 51.1%25 identity in 284 aa overlap and C-terminal region similar to C-terminal region of SW:CHI1_BACCI (EMBL:M57601) Bacillus circulans chitinase A1 precursor (EC 3.2.1.14) ChiA1%2C 699 aa%3B fasta scores: opt: 283 z-score: 287.0 E(): 1.6e-08%3B 25.0%25 identity in 476 aa overlap;gbkey=CDS;gene=2SCG1.01c;product=hypothetical protein;protein_id=NP_733527.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1299318	1299347	.	-	.	ID=id1477;Dbxref=GeneID:1096649;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=2SCG1.01c
NC_003888.3	RefSeq	ribosome_entry_site	1300337	1300343	.	-	.	ID=id1478;gbkey=RBS
NC_003888.3	RefSeq	gene	1300601	1302070	.	-	.	ID=gene1213;Dbxref=GeneID:1096650;Name=2SCG1.02c;gbkey=Gene;gene=2SCG1.02c;gene_biotype=protein_coding;gene_synonym=2SCG1.02c;locus_tag=SCO1227
NC_003888.3	RefSeq	CDS	1300601	1302070	.	-	0	ID=cds1192;Parent=gene1213;Dbxref=Genbank:NP_625515.1,GeneID:1096650;Name=NP_625515.1;Note=2SCG1.02c%2C possible DNA-binding protein%2C len: 489 aa%3B similar to TR:CAB89011 (EMBL:AL353870) Streptomyces coelicolor hypothetical 50.9 kD protein SC6F7.03%2C 467 aa%3B fasta scores: opt: 177 z-score: 183.6 E(): 0.0092%3B 26.7%25 identity in 476 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and a possible helix-turn-helix motif at residues 44..65 (+3.67 SD). Also contains a TTA leucine codon (159)%2C possible target for bldA regulation;gbkey=CDS;gene=2SCG1.02c;product=DNA-binding protein;protein_id=NP_625515.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1301594	1301596	.	-	.	ID=id1479;Dbxref=GeneID:1096650;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SCG1.02c
NC_003888.3	RefSeq	sequence_feature	1301804	1301968	.	-	.	ID=id1480;Dbxref=GeneID:1096650;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 31.10%2C E-value 2.6e-05;gbkey=misc_feature;gene=2SCG1.02c
NC_003888.3	RefSeq	ribosome_entry_site	1302075	1302079	.	-	.	ID=id1481;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1302276	1302279	.	+	.	ID=id1482;gbkey=RBS
NC_003888.3	RefSeq	gene	1302287	1303009	.	+	.	ID=gene1214;Dbxref=GeneID:1096651;Name=2SCG1.03;gbkey=Gene;gene=2SCG1.03;gene_biotype=protein_coding;gene_synonym=2SCG1.03;locus_tag=SCO1228
NC_003888.3	RefSeq	CDS	1302287	1303009	.	+	0	ID=cds1193;Parent=gene1214;Dbxref=Genbank:NP_625516.1,GeneID:1096651;Name=NP_625516.1;Note=2SCG1.03%2C probable acyltransferase%2C len: 240 aa%3B similar to TR:CAB76086 (EMBL:AL157956) Streptomyces coelicolor  acyltransferase SCL24.02%2C 223 aa%3B fasta scores: opt: 786 z-score: 912.9 E(): 0%3B 51.1%25 identity in 219 aa overlap and to TR:CAB51970 (EMBL:AL109661) Streptomyces coelicolor hypothetical protein SC6E10.16c%2C 262 aa%3B fasta scores: opt: 912 z-score: 945.5 E(): 0%3B 59.6%25 identity in 240 aa overlap. Contains Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase;gbkey=CDS;gene=2SCG1.03;product=acyltransferase;protein_id=NP_625516.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1302362	1302910	.	+	.	ID=id1483;Dbxref=GeneID:1096651;Note=Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase%2C score 157.50%2C E-value 2.3e-43;gbkey=misc_feature;gene=2SCG1.03
NC_003888.3	RefSeq	gene	1303058	1304119	.	+	.	ID=gene1215;Dbxref=GeneID:1096652;Name=2SCG1.04;gbkey=Gene;gene=2SCG1.04;gene_biotype=protein_coding;gene_synonym=2SCG1.04;locus_tag=SCO1229
NC_003888.3	RefSeq	CDS	1303058	1304119	.	+	0	ID=cds1194;Parent=gene1215;Dbxref=Genbank:NP_625517.1,GeneID:1096652;Name=NP_625517.1;Note=2SCG1.04%2C possible reductase%2C len: 353 aa%3B similar to TR:CAB90862 (EMBL:AL355752) Streptomyces coelicolor reductase SC10B7.09%2C 366 aa%3B fasta scores: opt: 182 z-score: 207.8 E(): 0.00042%3B 31.9%25 identity in 295 aa overlap;gbkey=CDS;gene=2SCG1.04;product=reductase;protein_id=NP_625517.1;transl_table=11
NC_003888.3	RefSeq	gene	1304188	1305813	.	-	.	ID=gene1216;Dbxref=GeneID:1096653;Name=2SCG1.05c;gbkey=Gene;gene=2SCG1.05c;gene_biotype=protein_coding;gene_synonym=2SCG1.05c;locus_tag=SCO1230
NC_003888.3	RefSeq	CDS	1304188	1305813	.	-	0	ID=cds1195;Parent=gene1216;Dbxref=Genbank:NP_625518.1,GeneID:1096653;Name=NP_625518.1;Note=2SCG1.05c%2C possible  tripeptidylaminopeptidase%2C len: 541 aa%3B almost identical to TR:Q54410 (EMBL:L27466) Streptomyces lividans tripeptidylaminopeptidase precursor%2C 537 aa and to TR:CAA18977 (EMBL:AL023517) Streptomyces coelicolor  protease SC1B5.03c%2C 543 aa%3B fasta scores: opt: 1804 z-score: 1664.4 E(): 0%3B 51.0%25 identity in 547 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold and match to Prosite entry PS00120 Lipases%2C serine active site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG1.05c;product=tripeptidylaminopeptidase;protein_id=NP_625518.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1304251	1305345	.	-	.	ID=id1484;Dbxref=GeneID:1096653;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 37.20%2C E-value 3.7e-07;gbkey=misc_feature;gene=2SCG1.05c
NC_003888.3	RefSeq	sequence_feature	1305058	1305087	.	-	.	ID=id1485;Dbxref=GeneID:1096653;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=2SCG1.05c
NC_003888.3	RefSeq	ribosome_entry_site	1305819	1305823	.	-	.	ID=id1486;gbkey=RBS
NC_003888.3	RefSeq	gene	1305967	1306731	.	-	.	ID=gene1217;Dbxref=GeneID:1096654;Name=2SCG1.06c;gbkey=Gene;gene=2SCG1.06c;gene_biotype=protein_coding;gene_synonym=2SCG1.06c,ureD;locus_tag=SCO1231
NC_003888.3	RefSeq	CDS	1305967	1306731	.	-	0	ID=cds1196;Parent=gene1217;Dbxref=Genbank:NP_625519.1,GeneID:1096654;Name=NP_625519.1;Note=2SCG1.06c%2C ureD%2C urease accessory protein%2C len: 254 aa%3B similar to SW:URED_ECOLI (EMBL:L03307) Escherichia coli urease accessory protein UreD%2C 278 aa%3B fasta scores: opt: 139 z-score: 156.7 E(): 0.29%3B 28.9%25 identity in 166 aa overlap. Contains Pfam match to entry PF01774 UreD%2C UreD urease accessory protein;gbkey=CDS;gene=2SCG1.06c;product=urease accessory protein;protein_id=NP_625519.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1306072	1306590	.	-	.	ID=id1487;Dbxref=GeneID:1096654;Note=Pfam match to entry PF01774 UreD%2C UreD urease accessory protein%2C score 44.40%2C E-value 1.5e-09;gbkey=misc_feature;gene=2SCG1.06c
NC_003888.3	RefSeq	gene	1306728	1307405	.	-	.	ID=gene1218;Dbxref=GeneID:1096655;Name=2SCG1.07c;gbkey=Gene;gene=2SCG1.07c;gene_biotype=protein_coding;gene_synonym=2SCG1.07c,ureG;locus_tag=SCO1232
NC_003888.3	RefSeq	CDS	1306728	1307405	.	-	0	ID=cds1197;Parent=gene1218;Dbxref=Genbank:NP_625520.1,GeneID:1096655;Name=NP_625520.1;Note=2SCG1.07c%2C ureG%2C urease accessory protein%2C len: 225 aa%3B similar to SW:UREG_MYCTU (EMBL:U33011) Mycobacterium tuberculosis urease accessory protein UreG%2C 224 aa%3B fasta scores: opt: 900 z-score: 1007.7 E(): 0%3B 65.6%25 identity in 218 aa overlap. Contains Pfam match to entry PF01495 HypB_UreG%2C HypB/UreG nucleotide-binding domain and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SCG1.07c;product=urease accessory protein;protein_id=NP_625520.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1306947	1307330	.	-	.	ID=id1488;Dbxref=GeneID:1096655;Note=Pfam match to entry PF01495 HypB_UreG%2C HypB/UreG nucleotide-binding domain%2C score 228.40%2C E-value 1e-64;gbkey=misc_feature;gene=2SCG1.07c
NC_003888.3	RefSeq	sequence_feature	1307286	1307309	.	-	.	ID=id1489;Dbxref=GeneID:1096655;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCG1.07c
NC_003888.3	RefSeq	ribosome_entry_site	1307412	1307415	.	-	.	ID=id1490;gbkey=RBS
NC_003888.3	RefSeq	gene	1307571	1308245	.	-	.	ID=gene1219;Dbxref=GeneID:1096656;Name=2SCG1.08c;gbkey=Gene;gene=2SCG1.08c;gene_biotype=protein_coding;gene_synonym=2SCG1.08c,ureF;locus_tag=SCO1233
NC_003888.3	RefSeq	CDS	1307571	1308245	.	-	0	ID=cds1198;Parent=gene1219;Dbxref=Genbank:NP_625521.1,GeneID:1096656;Name=NP_625521.1;Note=2SCG1.08c%2C ureF%2C urease accessory protein%2C len: 224 aa%3B similar to SW:UREF_MYCTU (EMBL:U33011) Mycobacterium tuberculosis urease accessory protein UreF%2C 211 aa%3B fasta scores: opt: 401 z-score: 448.6 E(): 1.6e-17%3B 38.8%25 identity in 224 aa overlap. Contains Pfam match to entry PF01730 UreF%2C UreF and match to Prosite entry PS00099 Thiolases active site;gbkey=CDS;gene=2SCG1.08c;product=urease accessroy protein UreF;protein_id=NP_625521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1307718	1308149	.	-	.	ID=id1491;Dbxref=GeneID:1096656;Note=Pfam match to entry PF01730 UreF%2C UreF%2C score -26.00%2C E-value 0.0067;gbkey=misc_feature;gene=2SCG1.08c
NC_003888.3	RefSeq	sequence_feature	1308051	1308092	.	-	.	ID=id1492;Dbxref=GeneID:1096656;Note=PS00099 Thiolases active site;gbkey=misc_feature;gene=2SCG1.08c
NC_003888.3	RefSeq	ribosome_entry_site	1308246	1308249	.	-	.	ID=id1493;gbkey=RBS
NC_003888.3	RefSeq	gene	1308254	1309975	.	-	.	ID=gene1220;Dbxref=GeneID:1096657;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;gene_synonym=2SCG1.09c;locus_tag=SCO1234
NC_003888.3	RefSeq	CDS	1308254	1309975	.	-	0	ID=cds1199;Parent=gene1220;Dbxref=Genbank:NP_625522.1,GeneID:1096657;Name=NP_625522.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=NP_625522.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1308257	1309816	.	-	.	ID=id1494;Dbxref=GeneID:1096657;Note=Pfam match to entry PF00449 urease%2C Urease%2C score 1136.10%2C E-value 0;gbkey=misc_feature;gene=ureC
NC_003888.3	RefSeq	sequence_feature	1308956	1309006	.	-	.	ID=id1495;Dbxref=GeneID:1096657;Note=PS00145 Urease active site;gbkey=misc_feature;gene=ureC
NC_003888.3	RefSeq	sequence_feature	1309535	1309576	.	-	.	ID=id1496;Dbxref=GeneID:1096657;Note=PS01120 Urease nickel ligands signature;gbkey=misc_feature;gene=ureC
NC_003888.3	RefSeq	gene	1309968	1310279	.	-	.	ID=gene1221;Dbxref=GeneID:1096658;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;gene_synonym=2SCG1.10c;locus_tag=SCO1235
NC_003888.3	RefSeq	CDS	1309968	1310279	.	-	0	ID=cds1200;Parent=gene1221;Dbxref=Genbank:NP_625523.1,GeneID:1096658;Name=NP_625523.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta)%3B in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity%2C optimum growth%2C resistance to low-pH killing in-vitro and persistence in-vivo%2C while the other operon does not seem to be active;gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=NP_625523.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1309982	1309988	.	-	.	ID=id1497;Dbxref=GeneID:1096658;gbkey=RBS;gene=ureB
NC_003888.3	RefSeq	sequence_feature	1310025	1310234	.	-	.	ID=id1498;Dbxref=GeneID:1096658;Note=Pfam match to entry PF00699 Urease_beta%2C Urease beta subunit.%2C score 155.20%2C E-value 1.1e-42;gbkey=misc_feature;gene=ureB
NC_003888.3	RefSeq	ribosome_entry_site	1310286	1310289	.	-	.	ID=id1499;gbkey=RBS
NC_003888.3	RefSeq	gene	1310293	1310595	.	-	.	ID=gene1222;Dbxref=GeneID:1096659;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;gene_synonym=2SCG1.11c;locus_tag=SCO1236
NC_003888.3	RefSeq	CDS	1310293	1310595	.	-	0	ID=cds1201;Parent=gene1222;Dbxref=Genbank:NP_625524.1,GeneID:1096659;Name=NP_625524.1;Note=UreA%2C with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide%3B nickel metalloenzyme%3B accessory proteins UreD%2C UreE%2C UreF%2C and UreG are necessary for assembly of the metallocenter;gbkey=CDS;gene=ureA;product=urease subunit gamma;protein_id=NP_625524.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1310299	1310595	.	-	.	ID=id1500;Dbxref=GeneID:1096659;Note=Pfam match to entry PF00547 urease_gamma%2C Urease%2C gamma subunit%2C score 216.40%2C E-value 8.8e-66;gbkey=misc_feature;gene=ureA
NC_003888.3	RefSeq	ribosome_entry_site	1310600	1310605	.	-	.	ID=id1501;gbkey=RBS
NC_003888.3	RefSeq	gene	1310820	1311104	.	-	.	ID=gene1223;Dbxref=GeneID:1096660;Name=2SCG1.12c;gbkey=Gene;gene=2SCG1.12c;gene_biotype=protein_coding;gene_synonym=2SCG1.12c;locus_tag=SCO1237
NC_003888.3	RefSeq	CDS	1310820	1311104	.	-	0	ID=cds1202;Parent=gene1223;Dbxref=Genbank:NP_625525.1,GeneID:1096660;Name=NP_625525.1;Note=2SCG1.12c%2C hypothetical protein%2C len: 94 aa%3B similar to TR:O50462 (EMBL:AL021006) Mycobacterium tuberculosis hypothetical 9.8 kD protein MTV006.19c%2C 89 aa%3B fasta scores: opt: 141 z-score: 195.0 E(): 0.0021%3B 36.6%25 identity in 71 aa ovelap;gbkey=CDS;gene=2SCG1.12c;product=hypothetical protein;protein_id=NP_625525.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1311202	1311207	.	+	.	ID=id1502;gbkey=RBS
NC_003888.3	RefSeq	gene	1311216	1311851	.	+	.	ID=gene1224;Dbxref=GeneID:1096661;Name=2SCG1.13;gbkey=Gene;gene=2SCG1.13;gene_biotype=protein_coding;gene_synonym=2SCG1.13;locus_tag=SCO1238
NC_003888.3	RefSeq	CDS	1311216	1311851	.	+	0	ID=cds1203;Parent=gene1224;Dbxref=Genbank:NP_625526.1,GeneID:1096661;Name=NP_625526.1;Note=2SCG1.13%2C probable ATP-dependent Clp protease%2C len: 211 aa%3B similar to TR:Q9ZH58 (EMBL:AF071885) Streptomyces coelicolor ATP-dependent Clp protease proteolytic subunit 2 (EC 3.4.21.92) ClpP2%2C 236 aa%3B fasta scores: opt: 769 z-score: 885.2 E(): 0%3B 55.8%25 identity in 208 aa overlap. Contains Pfam match to entry PF00574 CLP_protease%2C Clp protease;gbkey=CDS;gene=2SCG1.13;product=ATP-dependent Clp protease;protein_id=NP_625526.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1311240	1311815	.	+	.	ID=id1503;Dbxref=GeneID:1096661;Note=Pfam match to entry PF00574 CLP_protease%2C Clp protease%2C score 237.60%2C E-value 1.8e-67;gbkey=misc_feature;gene=2SCG1.13
NC_003888.3	RefSeq	ribosome_entry_site	1311846	1311852	.	+	.	ID=id1504;gbkey=RBS
NC_003888.3	RefSeq	gene	1311859	1312167	.	+	.	ID=gene1225;Dbxref=GeneID:1096662;Name=2SCG1.14;gbkey=Gene;gene=2SCG1.14;gene_biotype=protein_coding;gene_synonym=2SCG1.14;locus_tag=SCO1239
NC_003888.3	RefSeq	CDS	1311859	1312167	.	+	0	ID=cds1204;Parent=gene1225;Dbxref=Genbank:NP_625527.1,GeneID:1096662;Name=NP_625527.1;Note=2SCG1.14%2C unknown%2C len: 102 aa;gbkey=CDS;gene=2SCG1.14;product=hypothetical protein;protein_id=NP_625527.1;transl_table=11
NC_003888.3	RefSeq	gene	1312684	1313157	.	+	.	ID=gene1226;Dbxref=GeneID:1096663;Name=2SCG1.15;gbkey=Gene;gene=2SCG1.15;gene_biotype=protein_coding;gene_synonym=2SCG1.15;locus_tag=SCO1240
NC_003888.3	RefSeq	CDS	1312684	1313157	.	+	0	ID=cds1205;Parent=gene1226;Dbxref=Genbank:NP_625528.1,GeneID:1096663;Name=NP_625528.1;Note=2SCG1.15%2C possible hypothetical protein ( hypothetical protein)%2C len: 157 aa%3B similar to C-terminal region of TR:CAB92659 (EMBL:AL356832) Streptomyces coelicolor hypothetical protein SCD63A.07c%2C 398 aa%3B fasta scores: opt: 351 z-score: 415.4 E(): 1.1e-15%3B 42.5%25 identity in 134 aa overlap. Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG1.15;product=hypothetical protein;protein_id=NP_625528.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1312834	1313151	.	+	.	ID=id1505;Dbxref=GeneID:1096663;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 116.90%2C E-value 3.9e-31;gbkey=misc_feature;gene=2SCG1.15
NC_003888.3	RefSeq	gene	1313128	1313640	.	-	.	ID=gene1227;Dbxref=GeneID:1096664;Name=2SCG1.16c;gbkey=Gene;gene=2SCG1.16c;gene_biotype=protein_coding;gene_synonym=2SCG1.16c;locus_tag=SCO1241
NC_003888.3	RefSeq	CDS	1313128	1313640	.	-	0	ID=cds1206;Parent=gene1227;Dbxref=Genbank:NP_625529.1,GeneID:1096664;Name=NP_625529.1;Note=2SCG1.16c%2C conserved hypothetical protein%2C len: 170 aa%3B similar to TR:Q9X7Q5 (EMBL:AL049587) Streptomyces coelicolor hypothetical 17.1 kD protein%2C 161 aa%3B fasta scores: opt: 269 z-score: 295.6 E(): 5.3e-09%3B 39.4%25 identity in 132 aa overlap;gbkey=CDS;gene=2SCG1.16c;product=hypothetical protein;protein_id=NP_625529.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	1313160	1313207	.	+	.	ID=id1506;Note=Possible stem loop. Score 60: 20/20 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	1313845	1313848	.	+	.	ID=id1507;gbkey=RBS
NC_003888.3	RefSeq	gene	1313856	1314716	.	+	.	ID=gene1228;Dbxref=GeneID:1096665;Name=2SCG1.17;gbkey=Gene;gene=2SCG1.17;gene_biotype=protein_coding;gene_synonym=2SCG1.17;locus_tag=SCO1242
NC_003888.3	RefSeq	CDS	1313856	1314716	.	+	0	ID=cds1207;Parent=gene1228;Dbxref=Genbank:NP_625530.1,GeneID:1096665;Name=NP_625530.1;Note=2SCG1.17%2C probable DNA-binding protein%2C len: 286 aa%3B similar to TR:CAB8844 (EMBL:AL353815) Streptomyces coelicolor  DNA-binding protein SCD6.19%2C 295 aa%3B fasta scores: opt: 626 z-score: 747.0 E(): 0%3B 40.0%25 identity in 280 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and a possible helix-turn-helix motif at residues 25..46 (+4.46 SD). Also contains a TTA leucine codon (58)%2C possible target for bldA regulation;gbkey=CDS;gene=2SCG1.17;product=DNA-binding protein;protein_id=NP_625530.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1313901	1314065	.	+	.	ID=id1508;Dbxref=GeneID:1096665;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 37.70%2C E-value 2.6e-07;gbkey=misc_feature;gene=2SCG1.17
NC_003888.3	RefSeq	sequence_feature	1314027	1314029	.	+	.	ID=id1509;Dbxref=GeneID:1096665;Note=TTA Leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SCG1.17
NC_003888.3	RefSeq	ribosome_entry_site	1314953	1314956	.	-	.	ID=id1510;gbkey=RBS
NC_003888.3	RefSeq	gene	1315011	1316138	.	-	.	ID=gene1229;Dbxref=GeneID:1096666;Name=2SCG1.18c;gbkey=Gene;gene=2SCG1.18c;gene_biotype=protein_coding;gene_synonym=2SCG1.18c,bioF;locus_tag=SCO1243
NC_003888.3	RefSeq	CDS	1315011	1316138	.	-	0	ID=cds1208;Parent=gene1229;Dbxref=Genbank:NP_625531.1,GeneID:1096666;Name=NP_625531.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;gene=2SCG1.18c;product=8-amino-7-oxononanoate synthase;protein_id=NP_625531.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1315086	1315928	.	-	.	ID=id1511;Dbxref=GeneID:1096666;Note=Pfam match to entry PF00222 aminotran_2%2C Aminotransferases class-II%2C score 240.30%2C E-value 2.8e-68;gbkey=misc_feature;gene=2SCG1.18c
NC_003888.3	RefSeq	sequence_feature	1315437	1315466	.	-	.	ID=id1512;Dbxref=GeneID:1096666;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=2SCG1.18c
NC_003888.3	RefSeq	ribosome_entry_site	1316147	1316151	.	-	.	ID=id1513;gbkey=RBS
NC_003888.3	RefSeq	gene	1316289	1317512	.	+	.	ID=gene1230;Dbxref=GeneID:1096667;Name=2SCG1.19;gbkey=Gene;gene=2SCG1.19;gene_biotype=protein_coding;gene_synonym=2SCG1.19,bioB;locus_tag=SCO1244
NC_003888.3	RefSeq	CDS	1316289	1317512	.	+	0	ID=cds1209;Parent=gene1230;Dbxref=Genbank:NP_625532.1,GeneID:1096667;Name=NP_625532.1;Note=catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine;gbkey=CDS;gene=2SCG1.19;product=biotin synthase;protein_id=NP_625532.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1316331	1317251	.	+	.	ID=id1514;Dbxref=GeneID:1096667;Note=Pfam match to entry PF01792 Biotin_synth%2C Biotin synthase%2C score 430.80%2C E-value 1.2e-125;gbkey=misc_feature;gene=2SCG1.19
NC_003888.3	RefSeq	gene	1317505	1318791	.	+	.	ID=gene1231;Dbxref=GeneID:1096668;Name=2SCG1.20;gbkey=Gene;gene=2SCG1.20;gene_biotype=protein_coding;gene_synonym=2SCG1.20,bioA;locus_tag=SCO1245
NC_003888.3	RefSeq	CDS	1317505	1318791	.	+	0	ID=cds1210;Parent=gene1231;Dbxref=Genbank:NP_625533.1,GeneID:1096668;Name=NP_625533.1;Note=catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate;gbkey=CDS;gene=2SCG1.20;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=NP_625533.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1317622	1318725	.	+	.	ID=id1515;Dbxref=GeneID:1096668;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 435.70%2C E-value 5.2e-151;gbkey=misc_feature;gene=2SCG1.20
NC_003888.3	RefSeq	sequence_feature	1318240	1318353	.	+	.	ID=id1516;Dbxref=GeneID:1096668;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=2SCG1.20
NC_003888.3	RefSeq	ribosome_entry_site	1318782	1318786	.	+	.	ID=id1517;Dbxref=GeneID:1096668;gbkey=RBS;gene=2SCG1.20
NC_003888.3	RefSeq	gene	1318793	1319509	.	+	.	ID=gene1232;Dbxref=GeneID:1096669;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;gene_synonym=2SCG1.21;locus_tag=SCO1246
NC_003888.3	RefSeq	CDS	1318793	1319509	.	+	0	ID=cds1211;Parent=gene1232;Dbxref=Genbank:NP_625534.1,GeneID:1096669;Name=NP_625534.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;gene=bioD;product=dithiobiotin synthetase;protein_id=NP_625534.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1319878	1319883	.	+	.	ID=id1518;gbkey=RBS
NC_003888.3	RefSeq	gene	1319887	1320564	.	+	.	ID=gene1233;Dbxref=GeneID:1096670;Name=2SCG1.22;gbkey=Gene;gene=2SCG1.22;gene_biotype=protein_coding;gene_synonym=2SCG1.22;locus_tag=SCO1247
NC_003888.3	RefSeq	CDS	1319887	1320564	.	+	0	ID=cds1212;Parent=gene1233;Dbxref=Genbank:NP_625535.1,GeneID:1096670;Name=NP_625535.1;Note=2SCG1.22%2C conserved hypothetical protein%2C len: 225 aa%3B similar to TR:O06547 (EMBL:Z95584) Mycobacterium tuberculosis hypothetical 23.4 kD protein MTCI65.14%2C 216 aa%3B fasta scores: opt: 500 z-score: 599.5 E(): 6.3e-26%3B 45.9%25 identity in 209 aa overlap;gbkey=CDS;gene=2SCG1.22;product=hypothetical protein;protein_id=NP_625535.1;transl_table=11
NC_003888.3	RefSeq	gene	1320586	1320960	.	-	.	ID=gene1234;Dbxref=GeneID:1096671;Name=2SCG1.23c;gbkey=Gene;gene=2SCG1.23c;gene_biotype=protein_coding;gene_synonym=2SCG1.23c;locus_tag=SCO1248
NC_003888.3	RefSeq	CDS	1320586	1320960	.	-	0	ID=cds1213;Parent=gene1234;Dbxref=Genbank:NP_625536.1,GeneID:1096671;Name=NP_625536.1;Note=2SCG1.23c%2C conserved hypothetical protein%2C len: 124 aa%3B similar to TR:Q9RJS4 (EMBL:AL132707) Streptomyces coelicolor hypothetical 14.1 kD protein%2C 127 aa%3B fasta scores: opt: 214 z-score: 293.3 E(): 7.2e-09%3B 38.5%25 identity in 122 aa overlap;gbkey=CDS;gene=2SCG1.23c;product=hypothetical protein;protein_id=NP_625536.1;transl_table=11
NC_003888.3	RefSeq	gene	1320980	1321207	.	-	.	ID=gene1235;Dbxref=GeneID:1096672;Name=2SCG1.24c;gbkey=Gene;gene=2SCG1.24c;gene_biotype=protein_coding;gene_synonym=2SCG1.24c;locus_tag=SCO1249
NC_003888.3	RefSeq	CDS	1320980	1321207	.	-	0	ID=cds1214;Parent=gene1235;Dbxref=Genbank:NP_625537.1,GeneID:1096672;Name=NP_625537.1;Note=2SCG1.24c%2C unknown%2C len: 75 aa;gbkey=CDS;gene=2SCG1.24c;product=hypothetical protein;protein_id=NP_625537.1;transl_table=11
NC_003888.3	RefSeq	gene	1321315	1321740	.	+	.	ID=gene1236;Dbxref=GeneID:1096673;Name=2SCG1.25;gbkey=Gene;gene=2SCG1.25;gene_biotype=protein_coding;gene_synonym=2SCG1.25;locus_tag=SCO1250
NC_003888.3	RefSeq	CDS	1321315	1321740	.	+	0	ID=cds1215;Parent=gene1236;Dbxref=Genbank:NP_625538.1,GeneID:1096673;Name=NP_625538.1;Note=2SCG1.25%2C possible acetyltransferase%2C len: 141 aa%3B similar to TR:CAB72694 (EMBL:AL139074) Campylobacter jejuni  acetyltransferase CJ0225%2C 148 aa%3B fasta scores: opt: 187 z-score: 246.3 E(): 3e-06%3B 26.5%25 identity in 132 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=2SCG1.25;product=acetyltransferase;protein_id=NP_625538.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1321471	1321695	.	+	.	ID=id1519;Dbxref=GeneID:1096673;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 64.10%2C E-value 3e-15;gbkey=misc_feature;gene=2SCG1.25
NC_003888.3	RefSeq	ribosome_entry_site	1321812	1321818	.	+	.	ID=id1520;gbkey=RBS
NC_003888.3	RefSeq	gene	1321823	1323229	.	+	.	ID=gene1237;Dbxref=GeneID:1096674;Name=2SCG1.26;gbkey=Gene;gene=2SCG1.26;gene_biotype=protein_coding;gene_synonym=2SCG1.26;locus_tag=SCO1251
NC_003888.3	RefSeq	CDS	1321823	1323229	.	+	0	ID=cds1216;Parent=gene1237;Dbxref=Genbank:NP_625539.1,GeneID:1096674;Name=NP_625539.1;Note=2SCG1.26%2C possible integral membrane protein%2C len: 468 aa%3B similar to TR:Q9RKZ4 (EMBL:AL133213) Streptomyces coelicolor  integral membrane protein SC6D7.03%2C 443 aa%3B fasta scores: opt: 1577 z-score: 1678.6 E(): 0%3B 59.3%25 identity in 427 aa overlap. Contains Pfam matches to entries PF01595 DUF21%2C Domain of unknown function DUF21 and 2x PF00571 CBS%2C CBS domain. Also contains possible N-terminal region signal peptide sequence (seems to be cleavable) and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG1.26;product=hypothetical protein;protein_id=NP_625539.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1321832	1322428	.	+	.	ID=id1521;Dbxref=GeneID:1096674;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function DUF21%2C score 145.60%2C E-value 9e-40;gbkey=misc_feature;gene=2SCG1.26
NC_003888.3	RefSeq	sequence_feature	1322483	1322647	.	+	.	ID=id1522;Dbxref=GeneID:1096674;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 20.30%2C E-value 0.045;gbkey=misc_feature;gene=2SCG1.26
NC_003888.3	RefSeq	sequence_feature	1322675	1322830	.	+	.	ID=id1523;Dbxref=GeneID:1096674;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 11.70%2C E-value 1.7;gbkey=misc_feature;gene=2SCG1.26
NC_003888.3	RefSeq	ribosome_entry_site	1323214	1323218	.	+	.	ID=id1524;Dbxref=GeneID:1096674;gbkey=RBS;gene=2SCG1.26
NC_003888.3	RefSeq	gene	1323226	1324239	.	+	.	ID=gene1238;Dbxref=GeneID:1096675;Name=2SCG1.27;gbkey=Gene;gene=2SCG1.27;gene_biotype=protein_coding;gene_synonym=2SCG1.27;locus_tag=SCO1252
NC_003888.3	RefSeq	CDS	1323226	1324239	.	+	0	ID=cds1217;Parent=gene1238;Dbxref=Genbank:NP_625540.1,GeneID:1096675;Name=NP_625540.1;Note=2SCG1.27%2C possible integral membrane protein%2C len: 337 aa%3B similar to TR:Q9RKZ3 (EMBL:AL133213) Streptomyces coelicolor  integral membrane protein SC6D7.04%2C 347 aa%3B fasta scores: opt: 1101 z-score: 1230.5 E(): 0%3B 50.7%25 identity in 337 aa overlap. Contains Pfam matches to entries PF01595 DUF21%2C Domain of unknown function DUF21 and 2x PF00571 CBS%2C CBS domain. Also contains possible N-terminal region signal peptide sequence (seems to be cleavable) and possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCG1.27;product=hypothetical protein;protein_id=NP_625540.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1323232	1323828	.	+	.	ID=id1525;Dbxref=GeneID:1096675;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function DUF21%2C score 157.50%2C E-value 2.4e-43;gbkey=misc_feature;gene=2SCG1.27
NC_003888.3	RefSeq	sequence_feature	1323883	1324044	.	+	.	ID=id1526;Dbxref=GeneID:1096675;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 34.00%2C E-value 3.3e-06;gbkey=misc_feature;gene=2SCG1.27
NC_003888.3	RefSeq	sequence_feature	1324063	1324224	.	+	.	ID=id1527;Dbxref=GeneID:1096675;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 30.10%2C E-value 5.2e-05;gbkey=misc_feature;gene=2SCG1.27
NC_003888.3	RefSeq	gene	1324336	1325118	.	+	.	ID=gene1239;Dbxref=GeneID:1096676;Name=2SCG1.28;gbkey=Gene;gene=2SCG1.28;gene_biotype=protein_coding;gene_synonym=2SCG1.28;locus_tag=SCO1253
NC_003888.3	RefSeq	CDS	1324336	1325118	.	+	0	ID=cds1218;Parent=gene1239;Dbxref=Genbank:NP_625541.1,GeneID:1096676;Name=NP_625541.1;Note=2SCG1.28%2C conserved hypothetical protein%2C len: 260 aa%3B similar to TR:Q9X7W9 (EMBL:AL049485) Streptomyces coelicolor hypothetical 28.1 kD protein SC6A5.23%2C 261 aa%3B fasta scores: opt: 646 z-score: 748.3 E(): 0%3B 44.0%25 identity in 250 aa overlap;gbkey=CDS;gene=2SCG1.28;product=hypothetical protein;protein_id=NP_625541.1;transl_table=11
NC_003888.3	RefSeq	gene	1325285	1326727	.	+	.	ID=gene1240;Dbxref=GeneID:1096677;Name=2SCG1.29;gbkey=Gene;gene=2SCG1.29;gene_biotype=protein_coding;gene_synonym=2SCG1.29,2SCG18.01,purB;locus_tag=SCO1254
NC_003888.3	RefSeq	CDS	1325285	1326727	.	+	0	ID=cds1219;Parent=gene1240;Dbxref=Genbank:NP_733528.1,GeneID:1096677;Name=NP_733528.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;gene=2SCG1.29;product=adenylosuccinate lyase;protein_id=NP_733528.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1325681	1326565	.	+	.	ID=id1528;Dbxref=GeneID:1096677;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 42.20%2C E-value 5.8e-11;gbkey=misc_feature;gene=2SCG1.29
NC_003888.3	RefSeq	sequence_feature	1326131	1326160	.	+	.	ID=id1529;Dbxref=GeneID:1096677;Note=PS00163 Fumarate lyases signature;gbkey=misc_feature;gene=2SCG1.29
NC_003888.3	RefSeq	gene	1326802	1327284	.	+	.	ID=gene1241;Dbxref=GeneID:1096678;Name=2SCG18.02;gbkey=Gene;gene=2SCG18.02;gene_biotype=protein_coding;gene_synonym=2SCG18.02,mug;locus_tag=SCO1255
NC_003888.3	RefSeq	CDS	1326802	1327284	.	+	0	ID=cds1220;Parent=gene1241;Dbxref=Genbank:NP_625542.1,GeneID:1096678;Name=NP_625542.1;Note=2SCG18.02%2C mug%2C G/U mismatch-specific DNA glycosylase%2C len: 160 aa%3B highly similar to SW:MUG_ECOLI (EMBL:U28379) Escherichia coli mismatch-specific DNA glycosylase (EC 3.2.2.-) Mug%2C 168 aa%3B fasta scores: opt: 448 z-score: 564.7 E(): 5.7e-24%3B 44.7%25 identity in 152 aa overlap;gbkey=CDS;gene=2SCG18.02;product=G/U mismatch-specific DNA glycosylase;protein_id=NP_625542.1;transl_table=11
NC_003888.3	RefSeq	gene	1327484	1327924	.	-	.	ID=gene1242;Dbxref=GeneID:1096679;Name=2SCG18.03c;gbkey=Gene;gene=2SCG18.03c;gene_biotype=protein_coding;gene_synonym=2SCG18.03c;locus_tag=SCO1256
NC_003888.3	RefSeq	CDS	1327484	1327924	.	-	0	ID=cds1221;Parent=gene1242;Dbxref=Genbank:NP_625543.1,GeneID:1096679;Name=NP_625543.1;Note=2SCG18.03c%2C unknown%2C len: 146 aa;gbkey=CDS;gene=2SCG18.03c;product=hypothetical protein;protein_id=NP_625543.1;transl_table=11
NC_003888.3	RefSeq	gene	1327991	1328716	.	-	.	ID=gene1243;Dbxref=GeneID:1096680;Name=2SCG18.04c;gbkey=Gene;gene=2SCG18.04c;gene_biotype=protein_coding;gene_synonym=2SCG18.04c;locus_tag=SCO1257
NC_003888.3	RefSeq	CDS	1327991	1328716	.	-	0	ID=cds1222;Parent=gene1243;Dbxref=Genbank:NP_625544.1,GeneID:1096680;Name=NP_625544.1;Note=2SCG18.04c%2C possible ABC transport system integral membrane protein%2C len: 241 aa%3B similar to TR:CAB94565 (EMBL:AL359152) Streptomyces coelicolor ABC transport system integral membrane protein 2SC6G5.38c%2C 258 aa%3B fasta scores: opt: 513 z-score: 578.5 E(): 9.7e-25%3B 39.8%25 identity in 256 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG18.04c;product=ABC transporter;protein_id=NP_625544.1;transl_table=11
NC_003888.3	RefSeq	gene	1328719	1329639	.	-	.	ID=gene1244;Dbxref=GeneID:1096681;Name=2SCG18.05c;gbkey=Gene;gene=2SCG18.05c;gene_biotype=protein_coding;gene_synonym=2SCG18.05c;locus_tag=SCO1258
NC_003888.3	RefSeq	CDS	1328719	1329639	.	-	0	ID=cds1223;Parent=gene1244;Dbxref=Genbank:NP_625545.1,GeneID:1096681;Name=NP_625545.1;Note=2SCG18.05c%2C possible ABC transport system ATP-binding protein%2C len: 306 aa%3B similar to TR:CAB94566 (EMBL:AL359152) Streptomyces coelicolor ABC transporter ATP-binding protein 2SC6G5.39c%2C 346 aa%3B fasta scores: opt: 1018 z-score: 1166.6 E(): 0%3B 53.9%25 identity in 306 aa overlap and to SW:BCRA_BACLI (EMBL:L20573) Bacillus licheniformis bacitracin transport ATP-binding protein BcrA%2C 306 aa%3B fasta scores: opt: 594 z-score: 684.6 E(): 1.2e-30%3B 35.6%25 identity in 303 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=2SCG18.05c;product=ABC transporter ATP-binding protein;protein_id=NP_625545.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1328724	1328729	.	-	.	ID=id1530;Dbxref=GeneID:1096681;gbkey=RBS;gene=2SCG18.05c
NC_003888.3	RefSeq	sequence_feature	1329025	1329555	.	-	.	ID=id1531;Dbxref=GeneID:1096681;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 159.80%2C E-value 4.6e-44;gbkey=misc_feature;gene=2SCG18.05c
NC_003888.3	RefSeq	sequence_feature	1329208	1329252	.	-	.	ID=id1532;Dbxref=GeneID:1096681;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SCG18.05c
NC_003888.3	RefSeq	sequence_feature	1329511	1329534	.	-	.	ID=id1533;Dbxref=GeneID:1096681;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCG18.05c
NC_003888.3	RefSeq	gene	1329747	1330901	.	+	.	ID=gene1245;Dbxref=GeneID:1096682;Name=2SCG18.06;gbkey=Gene;gene=2SCG18.06;gene_biotype=protein_coding;gene_synonym=2SCG18.06;locus_tag=SCO1259
NC_003888.3	RefSeq	CDS	1329747	1330901	.	+	0	ID=cds1224;Parent=gene1245;Dbxref=Genbank:NP_625546.1,GeneID:1096682;Name=NP_625546.1;Note=2SCG18.06%2C probable two-component system sensor kinase%2C len: 384 aa%3B similar to TR:Q9ZBU9 (EMBL:AL034446) Streptomyces coelicolor sensor kinase SC1A9.03%2C 388 aa%3B fasta scores: opt: 377 z-score: 409.6 E(): 2.5e-15%3B 32.5%25 identity in 381 aa overlap and to TR:Q9Z678 (EMBL:AF102271) Streptomyces coelicolor sensor-histidine kinase%2C 398 aa%3B fasta scores: opt: 454 z-score: 491.8 E(): 6.6e-20%3B 38.0%25 identity in 287 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG18.06;product=two-component system sensor kinase;protein_id=NP_625546.1;transl_table=11
NC_003888.3	RefSeq	gene	1330916	1331578	.	+	.	ID=gene1246;Dbxref=GeneID:1096683;Name=2SCG18.07;gbkey=Gene;gene=2SCG18.07;gene_biotype=protein_coding;gene_synonym=2SCG18.07;locus_tag=SCO1260
NC_003888.3	RefSeq	CDS	1330916	1331578	.	+	0	ID=cds1225;Parent=gene1246;Dbxref=Genbank:NP_625547.1,GeneID:1096683;Name=NP_625547.1;Note=2SCG18.07%2C probable two-component system response regulator%2C len: 220 aa%3B similar to TR:CAB95289 (EMBL:AL359779) Streptomyces coelicolor two-component system response regulator SCG22.16c%2C 221 aa%3B fasta scores: opt: 756 z-score: 640.4 E(): 4.5e-30%3B 57.7%25 identity in 222 aa overlap and to TR:Q9Z677 (EMBL:AF102271) Streptomyces coelicolor response-regulator%2C 213 aa%3B fasta scores: opt: 610 z-score: 693.5 E(): 3.8e-31%3B 50.7%25 identity in 215 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains possible helix-turn-helix motif at residues 172..193 (+3.03 SD);gbkey=CDS;gene=2SCG18.07;product=two-component system response regulator;protein_id=NP_625547.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1330922	1331266	.	+	.	ID=id1534;Dbxref=GeneID:1096683;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 123.90%2C E-value 2.9e-33;gbkey=misc_feature;gene=2SCG18.07
NC_003888.3	RefSeq	sequence_feature	1331375	1331572	.	+	.	ID=id1535;Dbxref=GeneID:1096683;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 77.10%2C E-value 3.6e-19;gbkey=misc_feature;gene=2SCG18.07
NC_003888.3	RefSeq	sequence_feature	1331426	1331509	.	+	.	ID=id1536;Dbxref=GeneID:1096683;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=2SCG18.07
NC_003888.3	RefSeq	ribosome_entry_site	1331666	1331670	.	+	.	ID=id1537;gbkey=RBS
NC_003888.3	RefSeq	gene	1331678	1332832	.	+	.	ID=gene1247;Dbxref=GeneID:1096684;Name=2SCG18.08;gbkey=Gene;gene=2SCG18.08;gene_biotype=protein_coding;gene_synonym=2SCG18.08;locus_tag=SCO1261
NC_003888.3	RefSeq	CDS	1331678	1332832	.	+	0	ID=cds1226;Parent=gene1247;Dbxref=Genbank:NP_625548.1,GeneID:1096684;Name=NP_625548.1;Note=2SCG18.08%2C probable transcriptional regulatory protein%2C len: 384 aa%3B similar to TR:Q9S2D8 (EMBL:AL110470) Streptomyces coelicolor transcriptional repressor protein SCF85.03%2C 385 aa%3B fasta scores: opt: 980 z-score: 1062.5 E(): 0%3B 44.2%25 identity in 380 aa overlap and to SW:XYLR_ANATH (EMBL:Z69782) Anaerocellum thermophilum xylose repressor XylR%2C 399 aa%3B fasta scores: opt: 376 z-score: 411.5 E(): 1.9e-15%3B 25.4%25 identity in 394 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family and possible helix-turn-helix motif at residues 30..51 (+2.57 SD);gbkey=CDS;gene=2SCG18.08;product=transcriptional regulator;protein_id=NP_625548.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1331945	1332418	.	+	.	ID=id1538;Dbxref=GeneID:1096684;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 69.50%2C E-value 1.3e-19;gbkey=misc_feature;gene=2SCG18.08
NC_003888.3	RefSeq	gene	1332872	1333633	.	-	.	ID=gene1248;Dbxref=GeneID:1096685;Name=2SCG18.09c;gbkey=Gene;gene=2SCG18.09c;gene_biotype=protein_coding;gene_synonym=2SCG18.09c;locus_tag=SCO1262
NC_003888.3	RefSeq	CDS	1332872	1333633	.	-	0	ID=cds1227;Parent=gene1248;Dbxref=Genbank:NP_625549.1,GeneID:1096685;Name=NP_625549.1;Note=2SCG18.09c%2C probable gntR-family transcriptional regulator%2C len: 253 aa%3B similar to TR:Q9RKT6 (EMBL:AL132824) Streptomyces coelicolor transcriptional regulator SCAH10.21%2C 245 aa%3B fasta scores: opt: 306 z-score: 352.0 E(): 4e-12%3B 32.0%25 identity in 241 aa overlap and to SW:FARR_ECOLI (EMBL:X15790) Escherichia coli fatty acyl responsive regulator (P30 protein) FarR%2C 240 aa%3B fasta scores: opt: 204 z-score: 238.2 E(): 8.7e-06%3B 26.2%25 identity in 233 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and possible helix-turn-helix motif at residues 36..57 (+3.93 SD);gbkey=CDS;gene=2SCG18.09c;product=GntR family transcriptional regulator;protein_id=NP_625549.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1333409	1333585	.	-	.	ID=id1539;Dbxref=GeneID:1096685;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 59.10%2C E-value 1e-16;gbkey=misc_feature;gene=2SCG18.09c
NC_003888.3	RefSeq	ribosome_entry_site	1333639	1333643	.	-	.	ID=id1540;gbkey=RBS
NC_003888.3	RefSeq	gene	1333824	1334711	.	-	.	ID=gene1249;Dbxref=GeneID:1096686;Name=2SCG18.10c;gbkey=Gene;gene=2SCG18.10c;gene_biotype=protein_coding;gene_synonym=2SCG18.10c;locus_tag=SCO1263
NC_003888.3	RefSeq	CDS	1333824	1334711	.	-	0	ID=cds1228;Parent=gene1249;Dbxref=Genbank:NP_625550.1,GeneID:1096686;Name=NP_625550.1;Note=2SCG18.10c%2C probable ECF-sigma factor%2C len: 295 aa%3B similar to TR:Q9RDI5 (EMBL:AL136519) Streptomyces coelicolor sigma factor SCC57A.13c%2C 315 aa%3B fasta scores: opt: 887 z-score: 1027.2 E(): 0%3B 50.5%25 identity in 285 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=2SCG18.10c;product=ECF-sigma factor;protein_id=NP_625550.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1334496	1334657	.	-	.	ID=id1541;Dbxref=GeneID:1096686;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 31.50%2C E-value 2e-05;gbkey=misc_feature;gene=2SCG18.10c
NC_003888.3	RefSeq	ribosome_entry_site	1334714	1334717	.	-	.	ID=id1542;gbkey=RBS
NC_003888.3	RefSeq	gene	1334793	1335743	.	+	.	ID=gene1250;Dbxref=GeneID:1096687;Name=2SCG18.11;gbkey=Gene;gene=2SCG18.11;gene_biotype=protein_coding;gene_synonym=2SCG18.11;locus_tag=SCO1264
NC_003888.3	RefSeq	CDS	1334793	1335743	.	+	0	ID=cds1229;Parent=gene1250;Dbxref=Genbank:NP_625551.1,GeneID:1096687;Name=NP_625551.1;Note=2SCG18.11%2C probable hydrolase%2C len: 316 aa%3B similar to TR:CAB88827 (EMBL:AL353832) Streptomyces coelicolor hydrolase SCE6.23c%2C 294 aa%3B fasta scores: opt: 302 z-score: 345.4 E(): 9.3e-12%3B 31.5%25 identity in 276 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=2SCG18.11;product=hydrolase;protein_id=NP_625551.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1335027	1335689	.	+	.	ID=id1543;Dbxref=GeneID:1096687;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 70.10%2C E-value 4.6e-17;gbkey=misc_feature;gene=2SCG18.11
NC_003888.3	RefSeq	gene	1335695	1336564	.	-	.	ID=gene1251;Dbxref=GeneID:1096688;Name=2SCG18.12c;gbkey=Gene;gene=2SCG18.12c;gene_biotype=protein_coding;gene_synonym=2SCG18.12c;locus_tag=SCO1265
NC_003888.3	RefSeq	CDS	1335695	1336564	.	-	0	ID=cds1230;Parent=gene1251;Dbxref=Genbank:NP_625552.1,GeneID:1096688;Name=NP_625552.1;Note=2SCG18.12c%2C probable lipase%2C len: 289 aa%3B similar to TR:Q59644 (EMBL:X99255) Propionibacterium acnes triacylglycerol lipase precursor (EC 3.1.1.3) GehA%2C 339 aa%3B fasta scores: opt: 423 z-score: 498.8 E(): 2.7e-20%3B 36.9%25 identity in 233 aa overlap and to TR:Q9S295 (EMBL:AL096849) Streptomyces coelicolor  lipase SCI11.24c%2C 290 aa%3B fasta scores: opt: 682 z-score: 722.5 E(): 1.2e-34%3B 47.0%25 identity in 264 aa overlap. Contains Pfam match to entry PF01674 Lipase_2%2C Lipase;gbkey=CDS;gene=2SCG18.12c;product=lipase;protein_id=NP_625552.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1335860	1336387	.	-	.	ID=id1544;Dbxref=GeneID:1096688;Note=Pfam match to entry PF01674 Lipase_2%2C Lipase%2C score -109.30%2C E-value 0.075;gbkey=misc_feature;gene=2SCG18.12c
NC_003888.3	RefSeq	ribosome_entry_site	1336571	1336574	.	-	.	ID=id1545;gbkey=RBS
NC_003888.3	RefSeq	gene	1336608	1337876	.	-	.	ID=gene1252;Dbxref=GeneID:1096689;Name=2SCG18.13c;gbkey=Gene;gene=2SCG18.13c;gene_biotype=protein_coding;gene_synonym=2SCG18.13c,fabF2;locus_tag=SCO1266
NC_003888.3	RefSeq	CDS	1336608	1337876	.	-	0	ID=cds1231;Parent=gene1252;Dbxref=Genbank:NP_625553.1,GeneID:1096689;Name=NP_625553.1;gbkey=CDS;gene=2SCG18.13c;product=3-oxoacyl-ACP synthase;protein_id=NP_625553.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1336647	1337855	.	-	.	ID=id1546;Dbxref=GeneID:1096689;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 164.10%2C E-value 2.3e-45;gbkey=misc_feature;gene=2SCG18.13c
NC_003888.3	RefSeq	gene	1337873	1338130	.	-	.	ID=gene1253;Dbxref=GeneID:1096690;Name=2SCG18.14c;gbkey=Gene;gene=2SCG18.14c;gene_biotype=protein_coding;gene_synonym=2SCG18.14c;locus_tag=SCO1267
NC_003888.3	RefSeq	CDS	1337873	1338130	.	-	0	ID=cds1232;Parent=gene1253;Dbxref=Genbank:NP_625554.1,GeneID:1096690;Name=NP_625554.1;gbkey=CDS;gene=2SCG18.14c;product=acyl carrier protein;protein_id=NP_625554.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1337894	1338094	.	-	.	ID=id1547;Dbxref=GeneID:1096690;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 20.70%2C E-value 0.00044;gbkey=misc_feature;gene=2SCG18.14c
NC_003888.3	RefSeq	gene	1338248	1339366	.	-	.	ID=gene1254;Dbxref=GeneID:1096691;Name=2SCG18.15c;gbkey=Gene;gene=2SCG18.15c;gene_biotype=protein_coding;gene_synonym=2SCG18.15c;locus_tag=SCO1268
NC_003888.3	RefSeq	CDS	1338248	1339366	.	-	0	ID=cds1233;Parent=gene1254;Dbxref=Genbank:NP_625555.1,GeneID:1096691;Name=NP_625555.1;Note=2SCG18.15c%2C probable acyltransferase%2C len: 372 aa%3B similar to SW:ODO2_ECOLI (EMBL:J01619) Escherichia coli dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) SucB%2C 404 aa%3B fasta scores: opt: 281 z-score: 311.6 E(): 7.1e-10%3B 24.8%25 identity in 400 aa overlap. Contains Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes and match to Prosite entry PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site;gbkey=CDS;gene=2SCG18.15c;product=acyltransferase;protein_id=NP_625555.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1339145	1339363	.	-	.	ID=id1548;Dbxref=GeneID:1096691;Note=Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C score 18.80%2C E-value 0.002;gbkey=misc_feature;gene=2SCG18.15c
NC_003888.3	RefSeq	sequence_feature	1339202	1339291	.	-	.	ID=id1549;Dbxref=GeneID:1096691;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site;gbkey=misc_feature;gene=2SCG18.15c
NC_003888.3	RefSeq	gene	1339363	1340376	.	-	.	ID=gene1255;Dbxref=GeneID:1096692;Name=2SCG18.16c;gbkey=Gene;gene=2SCG18.16c;gene_biotype=protein_coding;gene_synonym=2SCG18.16c;locus_tag=SCO1269
NC_003888.3	RefSeq	CDS	1339363	1340376	.	-	0	ID=cds1234;Parent=gene1255;Dbxref=Genbank:NP_625556.1,GeneID:1096692;Name=NP_625556.1;Note=2SCG18.16c%2C probable pyruvate dehydrogenase beta subunit%2C len: 337 aa%3B similar to TR:Q9ZQY1 (EMBL:AF069910) Zea mays pyruvate dehydrogenase E1 beta subunit isoform 3 (EC 1.2.4.1) Pdh2%2C 374 aa%3B fasta scores: opt: 494 z-score: 584.2 E(): 4.7e-25%3B 30.3%25 identity in 337 aa overlap;gbkey=CDS;gene=2SCG18.16c;product=pyruvate dehydrogenase subunit beta;protein_id=NP_625556.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1339374	1339377	.	-	.	ID=id1550;Dbxref=GeneID:1096692;gbkey=RBS;gene=2SCG18.16c
NC_003888.3	RefSeq	gene	1340373	1341344	.	-	.	ID=gene1256;Dbxref=GeneID:1096693;Name=2SCG18.17c;gbkey=Gene;gene=2SCG18.17c;gene_biotype=protein_coding;gene_synonym=2SCG18.17c;locus_tag=SCO1270
NC_003888.3	RefSeq	CDS	1340373	1341344	.	-	0	ID=cds1235;Parent=gene1256;Dbxref=Genbank:NP_625557.1,GeneID:1096693;Name=NP_625557.1;Note=2SCG18.17c%2C probable pyruvate dehydrogenase alpha subunit%2C len: 323 aa%3B similar to TR:O69011 (EMBL:AF086791) Zymomonas mobilis pyruvate dehydrogenase alpha subunit PdhA%2C 353 aa%3B fasta scores: opt: 553 z-score: 643.8 E(): 2.3e-28%3B 33.4%25 identity in 314 aa overlap. Contains Pfam match to entry PF00676 E1_dehydrog%2C Dehydrogenase E1 component;gbkey=CDS;gene=2SCG18.17c;product=pyruvate dehydrogenase subunit alpha;protein_id=NP_625557.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1340381	1340385	.	-	.	ID=id1551;Dbxref=GeneID:1096693;gbkey=RBS;gene=2SCG18.17c
NC_003888.3	RefSeq	sequence_feature	1340406	1341239	.	-	.	ID=id1552;Dbxref=GeneID:1096693;Note=Pfam match to entry PF00676 E1_dehydrog%2C Dehydrogenase E1 component%2C score 127.50%2C E-value 2.5e-34;gbkey=misc_feature;gene=2SCG18.17c
NC_003888.3	RefSeq	ribosome_entry_site	1341351	1341355	.	-	.	ID=id1553;gbkey=RBS
NC_003888.3	RefSeq	gene	1341355	1342317	.	-	.	ID=gene1257;Dbxref=GeneID:1096694;Name=2SCG18.18c;gbkey=Gene;gene=2SCG18.18c;gene_biotype=protein_coding;gene_synonym=2SCG18.18c,fabH3;locus_tag=SCO1271
NC_003888.3	RefSeq	CDS	1341355	1342317	.	-	0	ID=cds1236;Parent=gene1257;Dbxref=Genbank:NP_625558.1,GeneID:1096694;Name=NP_625558.1;gbkey=CDS;gene=2SCG18.18c;product=3-oxoacyl-ACP synthase;protein_id=NP_625558.1;transl_table=11
NC_003888.3	RefSeq	gene	1342317	1342589	.	-	.	ID=gene1258;Dbxref=GeneID:1096695;Name=2SCG18.19c;gbkey=Gene;gene=2SCG18.19c;gene_biotype=protein_coding;gene_synonym=2SCG18.19c;locus_tag=SCO1272
NC_003888.3	RefSeq	CDS	1342317	1342589	.	-	0	ID=cds1237;Parent=gene1258;Dbxref=Genbank:NP_625559.1,GeneID:1096695;Name=NP_625559.1;gbkey=CDS;gene=2SCG18.19c;product=acyl carrier protein;protein_id=NP_625559.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1342325	1342328	.	-	.	ID=id1554;Dbxref=GeneID:1096695;gbkey=RBS;gene=2SCG18.19c
NC_003888.3	RefSeq	sequence_feature	1342359	1342571	.	-	.	ID=id1555;Dbxref=GeneID:1096695;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 52.50%2C E-value 6.8e-13;gbkey=misc_feature;gene=2SCG18.19c
NC_003888.3	RefSeq	sequence_feature	1342437	1342484	.	-	.	ID=id1556;Dbxref=GeneID:1096695;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=2SCG18.19c
NC_003888.3	RefSeq	gene	1342661	1343779	.	-	.	ID=gene1259;Dbxref=GeneID:1096696;Name=2SCG18.20c;gbkey=Gene;gene=2SCG18.20c;gene_biotype=protein_coding;gene_synonym=2SCG18.20c;locus_tag=SCO1273
NC_003888.3	RefSeq	CDS	1342661	1343779	.	-	0	ID=cds1238;Parent=gene1259;Dbxref=Genbank:NP_625560.1,GeneID:1096696;Name=NP_625560.1;Note=2SCG18.20c%2C probable reductase%2C len: 372 aa%3B similar to C-terminal domain of SW:HETM_ANASP (EMBL:L22883) Anabaena sp. polyketide synthase HetM%2C 506 aa%3B fasta scores: opt: 333 z-score: 389.0 E(): 3.5e-14%3B 35.7%25 identity in 395 aa overlap and to Streptomyces coelicolor 2SCG18.32c%2C 373 aa%3B fasta scores: opt: 241 z-score: 242.2 E(): 6.9e-08%3B 27.0%25 identity in 330 aa overlap. Contains TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=2SCG18.20c;product=reductase;protein_id=NP_625560.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1343549	1343551	.	-	.	ID=id1557;Dbxref=GeneID:1096696;Note=TTA Leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SCG18.20c
NC_003888.3	RefSeq	gene	1344147	1344806	.	+	.	ID=gene1260;Dbxref=GeneID:1096697;Name=2SCG18.21;gbkey=Gene;gene=2SCG18.21;gene_biotype=protein_coding;gene_synonym=2SCG18.21;locus_tag=SCO1274
NC_003888.3	RefSeq	CDS	1344147	1344806	.	+	0	ID=cds1239;Parent=gene1260;Dbxref=Genbank:NP_625561.1,GeneID:1096697;Name=NP_625561.1;Note=2SCG18.21%2C unknown%2C len: 219 aa;gbkey=CDS;gene=2SCG18.21;product=hypothetical protein;protein_id=NP_625561.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	1344779	1344820	.	+	.	ID=id1558;Note=possible stem-loop. Score 57: 19/19 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1344856	1346613	.	+	.	ID=gene1261;Dbxref=GeneID:1096698;Name=2SCG18.22;gbkey=Gene;gene=2SCG18.22;gene_biotype=protein_coding;gene_synonym=2SCG18.22;locus_tag=SCO1275
NC_003888.3	RefSeq	CDS	1344856	1346613	.	+	0	ID=cds1240;Parent=gene1261;Dbxref=Genbank:NP_625562.1,GeneID:1096698;Name=NP_625562.1;Note=2SCG18.22%2C probable halogenase%2C len: 585 aa%3B similar to TR:P95482 (EMBL:U74493) Pseudomonas fluorescens halogenase PrnC%2C 567 aa %3Bfasta scores: opt: 1486 z-score: 1773.6 E(): 0%3B 40.9%25 identity in 541 aa overlap;gbkey=CDS;gene=2SCG18.22;product=halogenase;protein_id=NP_625562.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1346500	1347557	.	+	.	ID=id1559;Note=previously sequenced DNA fagment%3B EMBL:AF225460 Streptomyces coelicolor RNA polymerase ECF sigma factor (sigJ) gene%2C complete cds%3B and unknown gene.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1346693	1347289	.	+	.	ID=gene1262;Dbxref=GeneID:1096699;Name=2SCG18.23;gbkey=Gene;gene=2SCG18.23;gene_biotype=protein_coding;gene_synonym=2SCG18.23,sigJ;locus_tag=SCO1276
NC_003888.3	RefSeq	CDS	1346693	1347289	.	+	0	ID=cds1241;Parent=gene1262;Dbxref=Genbank:NP_625563.1,GeneID:1096699;Name=NP_625563.1;Note=2SCG18.23%2C sigJ%2C RNA polymerase ECF sigma factor%2C len: 198 aa%3B identical to previously sequenced TR:AAF35371 (EMBL:AF225460) Streptomyces coelicolor RNA polymerase ECF sigma factor SigJ%2C 198 aa. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=2SCG18.23;product=RNA polymerase ECF sigma factor;protein_id=NP_625563.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1346843	1347004	.	+	.	ID=id1560;Dbxref=GeneID:1096699;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 17.30%2C E-value 0.0012;gbkey=misc_feature;gene=2SCG18.23
NC_003888.3	RefSeq	gene	1347343	1348086	.	+	.	ID=gene1263;Dbxref=GeneID:1096700;Name=2SCG18.24;gbkey=Gene;gene=2SCG18.24;gene_biotype=protein_coding;gene_synonym=2SCG18.24;locus_tag=SCO1277
NC_003888.3	RefSeq	CDS	1347343	1348086	.	+	0	ID=cds1242;Parent=gene1263;Dbxref=Genbank:NP_625564.1,GeneID:1096700;Name=NP_625564.1;Note=2SCG18.24%2C unknown%2C len: 247 aa%3B identical to N-terminal region of TR:AAF35372 (EMBL:AF225460) Streptomyces coelicolor hypothetical 7.4 kD protein (fragment)%2C 72 aa%3B fasta scores: opt: 452 z-score: 395.3 E(): 1.6e-14%3B 94.4%25 identity in 72 aa overlap. Contains 4 sets of different repeats: 2x conserved repeat: SGSSR%2C 6x degenerate repeat: NPLA(A/G)%2C 7x degenerate repeat: G(A/G)A(G/Q/N) and 7x degenerate repeat: Q(G/V/L)(L/T);gbkey=CDS;gene=2SCG18.24;product=hypothetical protein;protein_id=NP_625564.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1347448	1347462	.	+	.	ID=id1561;Dbxref=GeneID:1096700;Note=2x conserved repeat unit (RU1) translated in 2SCG18.24;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347466	1347481	.	+	.	ID=id1562;Dbxref=GeneID:1096700;Note=RU1;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347583	1347597	.	+	.	ID=id1563;Dbxref=GeneID:1096700;Note=6x degenerate repeat unit (RU2) translated in 2SCG18.24;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347610	1347621	.	+	.	ID=id1564;Dbxref=GeneID:1096700;Note=7x degenerate repeat unit (RU3) translated in 2SCG18.24;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347622	1347636	.	+	.	ID=id1565;Dbxref=GeneID:1096700;Note=RU2;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347646	1347657	.	+	.	ID=id1566;Dbxref=GeneID:1096700;Note=RU3;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347676	1347687	.	+	.	ID=id1567;Dbxref=GeneID:1096700;Note=RU3;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347688	1347702	.	+	.	ID=id1568;Dbxref=GeneID:1096700;Note=RU2;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347709	1347720	.	+	.	ID=id1569;Dbxref=GeneID:1096700;Note=RU3;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347727	1347741	.	+	.	ID=id1570;Dbxref=GeneID:1096700;Note=RU2;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347748	1347759	.	+	.	ID=id1571;Dbxref=GeneID:1096700;Note=RU3;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347760	1347774	.	+	.	ID=id1572;Dbxref=GeneID:1096700;Note=RU2;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347781	1347792	.	+	.	ID=id1573;Dbxref=GeneID:1096700;Note=RU3;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347790	1347804	.	+	.	ID=id1574;Dbxref=GeneID:1096700;Note=RU2;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347811	1347822	.	+	.	ID=id1575;Dbxref=GeneID:1096700;Note=RU3;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347904	1347912	.	+	.	ID=id1576;Dbxref=GeneID:1096700;Note=7x degenerate repeat unit (RU4) translated in 2SCG18.24;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347913	1347921	.	+	.	ID=id1577;Dbxref=GeneID:1096700;Note=RU4;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347922	1347930	.	+	.	ID=id1578;Dbxref=GeneID:1096700;Note=RU4;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347952	1347960	.	+	.	ID=id1579;Dbxref=GeneID:1096700;Note=RU4;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347961	1347969	.	+	.	ID=id1580;Dbxref=GeneID:1096700;Note=RU4;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1347997	1348005	.	+	.	ID=id1581;Dbxref=GeneID:1096700;Note=RU4;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	repeat_region	1348015	1348023	.	+	.	ID=id1582;Dbxref=GeneID:1096700;Note=RU4;gbkey=repeat_region;gene=2SCG18.24
NC_003888.3	RefSeq	ribosome_entry_site	1348163	1348168	.	+	.	ID=id1583;gbkey=RBS
NC_003888.3	RefSeq	gene	1348179	1349756	.	+	.	ID=gene1264;Dbxref=GeneID:1096701;Name=2SCG18.25;gbkey=Gene;gene=2SCG18.25;gene_biotype=protein_coding;gene_synonym=2SCG18.25;locus_tag=SCO1278
NC_003888.3	RefSeq	CDS	1348179	1349756	.	+	0	ID=cds1243;Parent=gene1264;Dbxref=Genbank:NP_625565.1,GeneID:1096701;Name=NP_625565.1;Note=2SCG18.25%2C possible ATP/GTP-binding protein%2C len: 525 aa%3B similar to TR:O27682 (EMBL:AE000923) Methanobacterium thermoautotrophicum ABC transporter MTH1645%2C 561 aa%3B fasta scores: opt: 540 z-score: 600.5 E(): 5.8e-26%3B 30.1%25 identity in 372 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SCG18.25;product=ATP/GTP-binding protein;protein_id=NP_625565.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1349391	1349414	.	+	.	ID=id1584;Dbxref=GeneID:1096701;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCG18.25
NC_003888.3	RefSeq	ribosome_entry_site	1349789	1349793	.	+	.	ID=id1585;gbkey=RBS
NC_003888.3	RefSeq	gene	1349799	1350677	.	+	.	ID=gene1265;Dbxref=GeneID:1096702;Name=2SCG18.26;gbkey=Gene;gene=2SCG18.26;gene_biotype=protein_coding;gene_synonym=2SCG18.26;locus_tag=SCO1279
NC_003888.3	RefSeq	CDS	1349799	1350677	.	+	0	ID=cds1244;Parent=gene1265;Dbxref=Genbank:NP_625566.1,GeneID:1096702;Name=NP_625566.1;Note=2SCG18.26%2C possible hypothetical protein%2C len: 292 aa%3B similar to TR:O07736 (EMBL:Z97193) Mycobacterium tuberculosis hypothetical 33.3 kD protein MTCY180.22%2C 303 aa%3B fasta scores: opt: 420 z-score: 478.9 E(): 3.4e-19%3B 36.8%25 identity in 247 aa overlap. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=2SCG18.26;product=hypothetical protein;protein_id=NP_625566.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	1350672	1350740	.	+	.	ID=id1586;Note=probable stem-loop. Score 99: 33/33 (100%25) matches%2C 0 gap;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1350735	1351976	.	-	.	ID=gene1266;Dbxref=GeneID:1096703;Name=2SCG18.27c;gbkey=Gene;gene=2SCG18.27c;gene_biotype=protein_coding;gene_synonym=2SCG18.27c;locus_tag=SCO1280
NC_003888.3	RefSeq	CDS	1350735	1351976	.	-	0	ID=cds1245;Parent=gene1266;Dbxref=Genbank:NP_625567.1,GeneID:1096703;Name=NP_625567.1;Note=2SCG18.27c%2C conserved hypothetical protein%2C len: 413 aa%3B similar to TR:Q9S203 (EMBL:AL109747) Streptomyces coelicolor hypothetical 48.6 kD protein SCJ21.04c%2C 448 aa%3B fasta scores: opt: 360 z-score: 403.3 E(): 5.6e-15%3B 30.7%25 identity in 391 aa overlap;gbkey=CDS;gene=2SCG18.27c;product=hypothetical protein;protein_id=NP_625567.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1351983	1351991	.	-	.	ID=id1587;gbkey=RBS
NC_003888.3	RefSeq	gene	1352088	1353410	.	-	.	ID=gene1267;Dbxref=GeneID:1096704;Name=2SCG18.28c;gbkey=Gene;gene=2SCG18.28c;gene_biotype=protein_coding;gene_synonym=2SCG18.28c;locus_tag=SCO1281
NC_003888.3	RefSeq	CDS	1352088	1353410	.	-	0	ID=cds1246;Parent=gene1267;Dbxref=Genbank:NP_625568.1,GeneID:1096704;Name=NP_625568.1;Note=2SCG18.28c%2C possible oxidoreductase%2C len: 440 aa%3B similar to SW:ORDL_ECOLI (EMBL:U38543) Escherichia coli probable oxidoreductase OrdL%2C 426 aa%3B fasta scores: opt: 273 z-score: 283.9 E(): 2.5e-08%3B 27.7%25 identity in 433 aa overlap;gbkey=CDS;gene=2SCG18.28c;product=oxidoreductase;protein_id=NP_625568.1;transl_table=11
NC_003888.3	RefSeq	gene	1353407	1353985	.	-	.	ID=gene1268;Dbxref=GeneID:1096705;Name=2SCG18.29c;gbkey=Gene;gene=2SCG18.29c;gene_biotype=protein_coding;gene_synonym=2SCG18.29c;locus_tag=SCO1282
NC_003888.3	RefSeq	CDS	1353407	1353985	.	-	0	ID=cds1247;Parent=gene1268;Dbxref=Genbank:NP_625569.1,GeneID:1096705;Name=NP_625569.1;Note=2SCG18.29c%2C probable oxidoreductase%2C len: 192 aa%3B similar to TR:Q9ZA25 (EMBL:AJ011500) Streptomyces violaceoruber FMN:NADH oxidoreductase Gra-ORF34%2C 179 aa%3B fasta scores: opt: 320 z-score: 377.4 E(): 1.5e-13%3B 41.3%25 identity in 167 aa overlap. Contains Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain;gbkey=CDS;gene=2SCG18.29c;product=oxidoreductase;protein_id=NP_625569.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1353434	1353874	.	-	.	ID=id1588;Dbxref=GeneID:1096705;Note=Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain%2C score 164.60%2C E-value 1.6e-45;gbkey=misc_feature;gene=2SCG18.29c
NC_003888.3	RefSeq	gene	1353978	1354445	.	-	.	ID=gene1269;Dbxref=GeneID:1096706;Name=2SCG18.30c;gbkey=Gene;gene=2SCG18.30c;gene_biotype=protein_coding;gene_synonym=2SCG18.30c;locus_tag=SCO1283
NC_003888.3	RefSeq	CDS	1353978	1354445	.	-	0	ID=cds1248;Parent=gene1269;Dbxref=Genbank:NP_625570.1,GeneID:1096706;Name=NP_625570.1;Note=2SCG18.30c%2C hypothetical protein%2C len: 155 aa%3B low similarity to N-terminal region of TR:Q53669 (EMBL:X89899) Streptomyces argillaceus mithramycin poliketide synthase MtmQ%2C 315 aa%3B fasta scores: opt: 130 z-score: 171.4 E(): 0.046%3B 27.5%25 identity in 120 aa overlap;gbkey=CDS;gene=2SCG18.30c;product=hypothetical protein;protein_id=NP_625570.1;transl_table=11
NC_003888.3	RefSeq	gene	1354527	1355912	.	-	.	ID=gene1270;Dbxref=GeneID:1096707;Name=2SCG18.31c;gbkey=Gene;gene=2SCG18.31c;gene_biotype=protein_coding;gene_synonym=2SCG18.31c;locus_tag=SCO1284
NC_003888.3	RefSeq	CDS	1354527	1355912	.	-	0	ID=cds1249;Parent=gene1270;Dbxref=Genbank:NP_625571.1,GeneID:1096707;Name=NP_625571.1;Note=2SCG18.31c%2C probable aminotransferase (hypothetical protein)%2C len: 461 aa%3B similar to TR:CAB76097 (EMBL:AL157956) Streptomyces coelicolor acetonitrile amonitransferase ArgD%2C 402 aa%3B fasta scores: opt: 783 z-score: 776.7 E(): 0%3B 41.6%25 identity in 385 aa overlap and to SW:OAT_BACSU (EMBL:X81802) Bacillus subtilis ornithine amonitransferase (EC 2.6.1.13) RocD%2C 401 aa%3B fasta scores: opt: 692 z-score: 687.5 E(): 8.3e-31%3B 32.4%25 identity in 380 aa overlap. Contains Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate and match to Prosite entry PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. Also contains a 6x degenerate repeat unit: (P/A/G)ST at N-terminal region and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG18.31c;product=aminotransferase;protein_id=NP_625571.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1354611	1355663	.	-	.	ID=id1589;Dbxref=GeneID:1096707;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 385.40%2C E-value 1.7e-133;gbkey=misc_feature;gene=2SCG18.31c
NC_003888.3	RefSeq	sequence_feature	1354992	1355105	.	-	.	ID=id1590;Dbxref=GeneID:1096707;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=2SCG18.31c
NC_003888.3	RefSeq	repeat_region	1355844	1355897	.	-	.	ID=id1591;Dbxref=GeneID:1096707;Note=6x degenerate repeat translated in 2SCG18.31c;gbkey=repeat_region;gene=2SCG18.31c
NC_003888.3	RefSeq	gene	1355909	1357030	.	-	.	ID=gene1271;Dbxref=GeneID:1096708;Name=2SCG18.32c;gbkey=Gene;gene=2SCG18.32c;gene_biotype=protein_coding;gene_synonym=2SCG18.32c;locus_tag=SCO1285
NC_003888.3	RefSeq	CDS	1355909	1357030	.	-	0	ID=cds1250;Parent=gene1271;Dbxref=Genbank:NP_625572.1,GeneID:1096708;Name=NP_625572.1;Note=2SCG18.32c%2C possible ketoreductase%2C len: 373 aa%3B similar to N-terminal region of TR:O50417 (EMBL:AL009198) Mycobacterium tuberculosis multi-functional enzyme MTV004.49%2C 650 aa%3B fasta scores: opt: 215 z-score: 237.4 E(): 9.7e-06%3B 30.5%25 identity in 377 aa overlap and to TR:Q9XC69 (EMBL:AF147704) Streptomyces fradiae MDP-hexose 4-ketoreductase TylCIV%2C 347 aa%3B fasta scores: opt: 182 z-score: 205.6 E(): 0.00057%3B 26.8%25 identity in 291 aa overlap and to Streptomyces coelicolor 2SCG18.20%2C 372 aa%3B fasta scores: opt: 241 z-score: 231.1 E(): 2.8e-07%3B 27.0%25 identity in 330 aa overlap;gbkey=CDS;gene=2SCG18.32c;product=ketoreductase;protein_id=NP_625572.1;transl_table=11
NC_003888.3	RefSeq	gene	1357085	1358209	.	-	.	ID=gene1272;Dbxref=GeneID:1096709;Name=2SCG18.33c;gbkey=Gene;gene=2SCG18.33c;gene_biotype=protein_coding;gene_synonym=2SCG18.33c;locus_tag=SCO1286
NC_003888.3	RefSeq	CDS	1357085	1358209	.	-	0	ID=cds1251;Parent=gene1272;Dbxref=Genbank:NP_625573.1,GeneID:1096709;Name=NP_625573.1;Note=2SCG18.33%2C probable oxidoreductase%2C len: 374 aa%3B similar to TR:P96072 (EMBL:U76606) Streptomyces viridifaciens isobutylamine N-hydroxylase (EC 1.14.-.-) (IBAH) VlmH%2C 378 aa%3B fasta scores: opt: 1020 z-score: 1177.8 E(): 0%3B 45.9%25 identity in 379 aa overlap;gbkey=CDS;gene=2SCG18.33c;product=oxidoreductase;protein_id=NP_625573.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1358220	1358225	.	-	.	ID=id1592;gbkey=RBS
NC_003888.3	RefSeq	gene	1358281	1359243	.	-	.	ID=gene1273;Dbxref=GeneID:1096710;Name=2SCG18.34c;gbkey=Gene;gene=2SCG18.34c;gene_biotype=protein_coding;gene_synonym=2SCG18.34c;locus_tag=SCO1287
NC_003888.3	RefSeq	CDS	1358281	1359243	.	-	0	ID=cds1252;Parent=gene1273;Dbxref=Genbank:NP_625574.1,GeneID:1096710;Name=NP_625574.1;Note=2SCG18.34c%2C hypothetical protein%2C len: 320 aa%3B similar to C-terminal region of TR:O31566 (EMBL:Z99108) Bacillus subtilis YfiX protein%2C 606 aa%3B fasta scores: opt: 252 z-score: 295.6 E(): 5.6e-09%3B 27.5%25 identity in 306 aa overlap;gbkey=CDS;gene=2SCG18.34c;product=hypothetical protein;protein_id=NP_625574.1;transl_table=11
NC_003888.3	RefSeq	gene	1359227	1359733	.	-	.	ID=gene1274;Dbxref=GeneID:1096711;Name=2SCG18.35c;gbkey=Gene;gene=2SCG18.35c;gene_biotype=protein_coding;gene_synonym=2SCG18.35c;locus_tag=SCO1288
NC_003888.3	RefSeq	CDS	1359227	1359733	.	-	0	ID=cds1253;Parent=gene1274;Dbxref=Genbank:NP_625575.1,GeneID:1096711;Name=NP_625575.1;Note=2SCG18.35c%2C possible integral membrane protein%2C len: 168 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCG18.35c;product=hypothetical protein;protein_id=NP_625575.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1359249	1359254	.	-	.	ID=id1593;Dbxref=GeneID:1096711;gbkey=RBS;gene=2SCG18.35c
NC_003888.3	RefSeq	ribosome_entry_site	1359739	1359743	.	-	.	ID=id1594;gbkey=RBS
NC_003888.3	RefSeq	gene	1359896	1361419	.	+	.	ID=gene1275;Dbxref=GeneID:1096712;Name=2SCG18.36;gbkey=Gene;gene=2SCG18.36;gene_biotype=protein_coding;gene_synonym=2SCG18.36;locus_tag=SCO1289
NC_003888.3	RefSeq	CDS	1359896	1361419	.	+	0	ID=cds1254;Parent=gene1275;Dbxref=Genbank:NP_625576.1,GeneID:1096712;Name=NP_625576.1;Note=2SCG18.36%2C probable gntR-family regulatory protein%2C len: 507 aa%3B similar to TR:CAB89055 (EMBL:AL353872) Streptomyces coelicolor gntR-family regulator SC5G8.04%2C 462 aa%3B fasta scores: opt: 1289 z-score: 1152.7 E(): 0%3B 49.3%25 identity in 436 aa overlap and to SW:MOCR_RHIME (EMBL:X78503) Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR%2C 493 aa%3B fasta scores: opt: 584 z-score: 527.8 E(): 6.5e-22%3B 34.8%25 identity in 451 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=2SCG18.36;product=GntR family transcriptional regulator;protein_id=NP_625576.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1360007	1360186	.	+	.	ID=id1595;Dbxref=GeneID:1096712;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 62.40%2C E-value 9.9e-18;gbkey=misc_feature;gene=2SCG18.36
NC_003888.3	RefSeq	ribosome_entry_site	1361552	1361556	.	+	.	ID=id1596;gbkey=RBS
NC_003888.3	RefSeq	gene	1361564	1363153	.	+	.	ID=gene1276;Dbxref=GeneID:1096713;Name=2SCG18.36;gbkey=Gene;gene=2SCG18.36;gene_biotype=protein_coding;gene_synonym=2SCG18.36,SCBAC36F5.01;locus_tag=SCO1290
NC_003888.3	RefSeq	CDS	1361564	1363153	.	+	0	ID=cds1255;Parent=gene1276;Dbxref=Genbank:NP_733529.1,GeneID:1096713;Name=NP_733529.1;Note=SCBAC36F5.01%2C possible  phosphatase (fragment)%2C len: >296 aa%3B similar to C-terminal region of SW:PPBD_BACSU (EMBL:U49060) Bacillus subtilis alkaline phosphatase D precursor (EC 3.1.3.1) PhoD%2C 556 aa%3B fasta scores: opt: 277 Z-score: 319.4 bits: 68.0 E(): 3.5e-10%3B 30.258%25 identity in 271 aa overlap~2SCG18.37%2C possible  alkaline phosphatase (fragment)%2C len: >266 aa%3B similar to SW:PPBD_BACSU (EMBL:U49060) Bacillus subtilis alkaline phosphatase D precursor (EC 3.1.3.1) PhoD%2C 556 aa%3B fasta scores: opt: 148 z-score: 173.1 E(): 0.037%3B 25.2%25 identity in 270 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG18.36;product=alkaline phosphatase;protein_id=NP_733529.1;transl_table=11
NC_003888.3	RefSeq	gene	1363304	1364707	.	+	.	ID=gene1277;Dbxref=GeneID:1096714;Name=SCBAC36F5.02;gbkey=Gene;gene=SCBAC36F5.02;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.02;locus_tag=SCO1291
NC_003888.3	RefSeq	CDS	1363304	1364707	.	+	0	ID=cds1256;Parent=gene1277;Dbxref=Genbank:NP_625577.1,GeneID:1096714;Name=NP_625577.1;Note=SCBAC36F5.02%2C unknown%2C len: 467 aa;gbkey=CDS;gene=SCBAC36F5.02;product=hypothetical protein;protein_id=NP_625577.1;transl_table=11
NC_003888.3	RefSeq	gene	1364716	1367439	.	+	.	ID=gene1278;Dbxref=GeneID:1096715;Name=SCBAC36F5.03;gbkey=Gene;gene=SCBAC36F5.03;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.03;locus_tag=SCO1292
NC_003888.3	RefSeq	CDS	1364716	1367439	.	+	0	ID=cds1257;Parent=gene1278;Dbxref=Genbank:NP_625578.1,GeneID:1096715;Name=NP_625578.1;Note=SCBAC36F5.03%2C hypothetical protein%2C len: 907 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC36F5.03;product=hypothetical protein;protein_id=NP_625578.1;transl_table=11
NC_003888.3	RefSeq	gene	1367555	1368913	.	+	.	ID=gene1279;Dbxref=GeneID:1096716;Name=SCBAC36F5.04;gbkey=Gene;gene=SCBAC36F5.04;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.04;locus_tag=SCO1293
NC_003888.3	RefSeq	CDS	1367555	1368913	.	+	0	ID=cds1258;Parent=gene1279;Dbxref=Genbank:NP_625579.1,GeneID:1096716;Name=NP_625579.1;Note=SCBAC36F5.04%2C hypothetical protein%2C len: 452 aa%3B C-terminal part similar to TR:Q9FC64 (EMBL:AL391515) Streptomyces coelicolor acetyltransferase SC4B10.23%2C 163 aa%3B fasta scores: opt: 287 Z-score: 300.0 bits: 63.3 E(): 4.2e-09%3B 42.857%25 identity in 133 aa overlap. Contains Pfam match to entry PF01842 ACT%2C ACT domain and PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCBAC36F5.04;product=hypothetical protein;protein_id=NP_625579.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1367819	1368028	.	+	.	ID=id1597;Dbxref=GeneID:1096716;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 17.60%2C E-value 0.29;gbkey=misc_feature;gene=SCBAC36F5.04
NC_003888.3	RefSeq	sequence_feature	1368572	1368778	.	+	.	ID=id1598;Dbxref=GeneID:1096716;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 36.20%2C E-value 7.7e-07;gbkey=misc_feature;gene=SCBAC36F5.04
NC_003888.3	RefSeq	gene	1368938	1370161	.	-	.	ID=gene1280;Dbxref=GeneID:1096717;Name=SCBAC36F5.05c;gbkey=Gene;gene=SCBAC36F5.05c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.05c;locus_tag=SCO1294
NC_003888.3	RefSeq	CDS	1368938	1370161	.	-	0	ID=cds1259;Parent=gene1280;Dbxref=Genbank:NP_625580.1,GeneID:1096717;Name=NP_625580.1;Note=SCBAC36F5.05c%2C possible cystathionine gamma-synthase%2C len: 407 aa%3B similar to SW:METB_HAEIN (EMBL:U32694) Haemophilus influenzae cystathionine gamma-synthase (EC 4.2.99.9) MetB or HI0086%2C 369 aa%3B fasta scores: opt: 625 Z-score: 685.3 bits: 135.6 E(): 1.5e-30%3B 34.127%25 identity in 378 aa overlap. Contains Pfam match to entry PF01053 Cys_Met_Meta_PP%2C Cys/Met metabolism PLP-dependent enzyme and match to Prosite entry PS01050 Uncharacterized protein family UPF0031 signature 2;gbkey=CDS;gene=SCBAC36F5.05c;product=cystathionine gamma-synthase;protein_id=NP_625580.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1368992	1370089	.	-	.	ID=id1599;Dbxref=GeneID:1096717;Note=Pfam match to entry PF01053 Cys_Met_Meta_PP%2C Cys/Met metabolism PLP-dependent enzyme%2C score 384.30%2C E-value 1.2e-111;gbkey=misc_feature;gene=SCBAC36F5.05c
NC_003888.3	RefSeq	sequence_feature	1369445	1369477	.	-	.	ID=id1600;Dbxref=GeneID:1096717;Note=PS01050 Uncharacterized protein family UPF0031 signature 2;gbkey=misc_feature;gene=SCBAC36F5.05c
NC_003888.3	RefSeq	gene	1370221	1370712	.	+	.	ID=gene1281;Dbxref=GeneID:1096718;Name=SCBAC36F5.06;gbkey=Gene;gene=SCBAC36F5.06;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.06;locus_tag=SCO1295
NC_003888.3	RefSeq	CDS	1370221	1370712	.	+	0	ID=cds1260;Parent=gene1281;Dbxref=Genbank:NP_625581.1,GeneID:1096718;Name=NP_625581.1;Note=SCBAC36F5.06%2C probable AsnC-family transcriptional regulatory protein%2C len: 163 aa%3B similar to SW:LRP_RHIME (EMBL:AF193023) Rhizobium meliloti leucine-responsive regulatory protein Lrp%2C 156 aa%3B fasta scores: opt: 285 Z-score: 357.6 bits: 72.4 E(): 2.6e-12%3B 33.333%25 identity in 147 aa overlap. Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family and possible helix-turn-helix motif at residues 24..45 (+2.96 SD);gbkey=CDS;gene=SCBAC36F5.06;product=transcription regulator AsnC;protein_id=NP_625581.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1370311	1370622	.	+	.	ID=id1601;Dbxref=GeneID:1096718;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 86.00%2C E-value 7.9e-22;gbkey=misc_feature;gene=SCBAC36F5.06
NC_003888.3	RefSeq	ribosome_entry_site	1370779	1370782	.	+	.	ID=id1602;gbkey=RBS
NC_003888.3	RefSeq	gene	1370791	1372479	.	+	.	ID=gene1282;Dbxref=GeneID:1096719;Name=SCBAC36F5.07;gbkey=Gene;gene=SCBAC36F5.07;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.07;locus_tag=SCO1296
NC_003888.3	RefSeq	CDS	1370791	1372479	.	+	0	ID=cds1261;Parent=gene1282;Dbxref=Genbank:NP_625582.1,GeneID:1096719;Name=NP_625582.1;Note=SCBAC36F5.07%2C conserved hypothetical protein%2C len: 562 aa%3B similar to TR:Q9A3Z7 (EMBL:AE005968) Caulobacter crescentus hypothetical protein CC3053%2C 597 aa%3B fasta scores: opt: 331 Z-score: 361.3 bits: 76.8 E(): 1.6e-12%3B 28.308%25 identity in 597 aa overlap;gbkey=CDS;gene=SCBAC36F5.07;product=hypothetical protein;protein_id=NP_625582.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1372806	1372892	.	+	.	ID=id1603;Note=3x degenerate repeat: CGCCCCGCACACCGATG(C/T)CG(C/T)CGGGGTCA;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1372948	1373469	.	-	.	ID=gene1283;Dbxref=GeneID:1096720;Name=SCBAC36F5.08c;gbkey=Gene;gene=SCBAC36F5.08c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.08c;locus_tag=SCO1297
NC_003888.3	RefSeq	CDS	1372948	1373469	.	-	0	ID=cds1262;Parent=gene1283;Dbxref=Genbank:NP_625583.1,GeneID:1096720;Name=NP_625583.1;Note=SCBAC36F5.08c%2C unknown%2C len: 173 aa;gbkey=CDS;gene=SCBAC36F5.08c;product=hypothetical protein;protein_id=NP_625583.1;transl_table=11
NC_003888.3	RefSeq	gene	1373491	1374042	.	-	.	ID=gene1284;Dbxref=GeneID:1096721;Name=SCBAC36F5.09c;gbkey=Gene;gene=SCBAC36F5.09c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.09c;locus_tag=SCO1298
NC_003888.3	RefSeq	CDS	1373491	1374042	.	-	0	ID=cds1263;Parent=gene1284;Dbxref=Genbank:NP_625584.1,GeneID:1096721;Name=NP_625584.1;Note=SCBAC36F5.09c%2C conserved hypothetical protein%2C len: 183 aa%3B similar to TR:Q9KB42 (EMBL:AP001514) Bacillus halodurans BH2092 protein%2C 162 aa%3B fasta scores: opt: 361 Z-score: 424.4 bits: 85.0 E(): 5e-16%3B 37.410%25 identity in 139 aa overlap. Contains Pfam match to entry PF00581 Rhodanese%2C Rhodanese-like domain;gbkey=CDS;gene=SCBAC36F5.09c;product=hypothetical protein;protein_id=NP_625584.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1373581	1373859	.	-	.	ID=id1604;Dbxref=GeneID:1096721;Note=Pfam match to entry PF00581 Rhodanese%2C Rhodanese-like domain%2C score 48.30%2C E-value 1.7e-10;gbkey=misc_feature;gene=SCBAC36F5.09c
NC_003888.3	RefSeq	gene	1374103	1374549	.	+	.	ID=gene1285;Dbxref=GeneID:1096722;Name=SCBAC36F5.10;gbkey=Gene;gene=SCBAC36F5.10;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.10;locus_tag=SCO1299
NC_003888.3	RefSeq	CDS	1374103	1374549	.	+	0	ID=cds1264;Parent=gene1285;Dbxref=Genbank:NP_625585.1,GeneID:1096722;Name=NP_625585.1;Note=SCBAC36F5.10%2C probable transcriptional regulatory protein%2C len: 148 aa%3B similar to SW:LRPC_BACSU (EMBL:AB001488) Bacillus subtilis transcriptional regulator LrpC%2C 144 aa%3B fasta scores: opt: 294 Z-score: 365.8 bits: 73.6 E(): 9.1e-13%3B 34.848%25 identity in 132 aa overlap. Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family and possible helix-turn-helix motif at residues 23..44 (+3.08 SD);gbkey=CDS;gene=SCBAC36F5.10;product=transcriptional regulator;protein_id=NP_625585.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1374190	1374498	.	+	.	ID=id1605;Dbxref=GeneID:1096722;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 88.60%2C E-value 1.2e-22;gbkey=misc_feature;gene=SCBAC36F5.10
NC_003888.3	RefSeq	gene	1374583	1377582	.	-	.	ID=gene1286;Dbxref=GeneID:1096723;Name=SCBAC36F5.11c;gbkey=Gene;gene=SCBAC36F5.11c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.11c;locus_tag=SCO1300
NC_003888.3	RefSeq	CDS	1374583	1377582	.	-	0	ID=cds1265;Parent=gene1286;Dbxref=Genbank:NP_625586.1,GeneID:1096723;Name=NP_625586.1;Note=SCBAC36F5.11c%2C possible exonuclease%2C len: 999 aa%3B similar to SW:SBCC_ECOLI (EMBL:X15981) Escherichia coli exonuclease SbcC or B0397%2C 1048 aa%3B fasta scores: opt: 363 Z-score: 323.3 bits: 71.4 E(): 2.1e-10%3B 26.004%25 identity in 1096 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and a possible coiled-coil region at approx. residues 650..698;gbkey=CDS;gene=SCBAC36F5.11c;product=exonuclease;protein_id=NP_625586.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1377457	1377480	.	-	.	ID=id1606;Dbxref=GeneID:1096723;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC36F5.11c
NC_003888.3	RefSeq	gene	1377579	1378742	.	-	.	ID=gene1287;Dbxref=GeneID:1096724;Name=SCBAC36F5.12c;gbkey=Gene;gene=SCBAC36F5.12c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.12c;locus_tag=SCO1301
NC_003888.3	RefSeq	CDS	1377579	1378742	.	-	0	ID=cds1266;Parent=gene1287;Dbxref=Genbank:NP_625587.1,GeneID:1096724;Name=NP_625587.1;Note=SCBAC36F5.12c%2C possible exonuclease%2C len: 387 aa%3B similar to SW:SBCD_ECOLI (EMBL:X15981) Escherichia coli exonuclease SbcD or B0398%2C 400 aa%3B fasta scores: opt: 394 Z-score: 436.1 bits: 89.5 E(): 1.1e-16%3B 30.711%25 identity in 394 aa overlap. Contains Pfam match to entry PF02549 DNA_repair%2C DNA repair exonuclease;gbkey=CDS;gene=SCBAC36F5.12c;product=exonuclease;protein_id=NP_625587.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1377588	1377594	.	-	.	ID=id1607;Dbxref=GeneID:1096724;gbkey=RBS;gene=SCBAC36F5.12c
NC_003888.3	RefSeq	sequence_feature	1377918	1378742	.	-	.	ID=id1608;Dbxref=GeneID:1096724;Note=Pfam match to entry PF02549 DNA_repair%2C DNA repair exonuclease%2C score 165.00%2C E-value 1.3e-45;gbkey=misc_feature;gene=SCBAC36F5.12c
NC_003888.3	RefSeq	gene	1379126	1379752	.	-	.	ID=gene1288;Dbxref=GeneID:1096725;Name=SCBAC36F5.13c;gbkey=Gene;gene=SCBAC36F5.13c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.13c;locus_tag=SCO1302
NC_003888.3	RefSeq	CDS	1379126	1379752	.	-	0	ID=cds1267;Parent=gene1288;Dbxref=Genbank:NP_625588.1,GeneID:1096725;Name=NP_625588.1;Note=SCBAC36F5.13c%2C conserved hypothetical protein%2C len: 208 aa%3B similar to TR:Q9K6U5 (EMBL:AP001519) Bacillus halodurans BH3630 protein%2C 213 aa%3B fasta scores: opt: 659 Z-score: 773.5 bits: 150.1 E(): 1.8e-35%3B 46.341%25 identity in 205 aa overlap. Contains Pfam match to entry PF01205 UPF0029%2C Uncharacterized protein family UPF0029 and match to Prosite entry PS00910 Uncharacterized protein family UPF0029 signature;gbkey=CDS;gene=SCBAC36F5.13c;product=hypothetical protein;protein_id=NP_625588.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1379369	1379701	.	-	.	ID=id1609;Dbxref=GeneID:1096725;Note=Pfam match to entry PF01205 UPF0029%2C Uncharacterized protein family UPF0029%2C score 183.10%2C E-value 4.4e-51;gbkey=misc_feature;gene=SCBAC36F5.13c
NC_003888.3	RefSeq	sequence_feature	1379429	1379518	.	-	.	ID=id1610;Dbxref=GeneID:1096725;Note=PS00910 Uncharacterized protein family UPF0029 signature;gbkey=misc_feature;gene=SCBAC36F5.13c
NC_003888.3	RefSeq	gene	1379824	1380627	.	-	.	ID=gene1289;Dbxref=GeneID:1096726;Name=SCBAC36F5.14c;gbkey=Gene;gene=SCBAC36F5.14c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.14c;locus_tag=SCO1303
NC_003888.3	RefSeq	CDS	1379824	1380627	.	-	0	ID=cds1268;Parent=gene1289;Dbxref=Genbank:NP_625589.1,GeneID:1096726;Name=NP_625589.1;Note=SCBAC36F5.14c%2C unknown%2C len: 267 aa;gbkey=CDS;gene=SCBAC36F5.14c;product=hypothetical protein;protein_id=NP_625589.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1380629	1380633	.	-	.	ID=id1611;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1380712	1380717	.	+	.	ID=id1612;gbkey=RBS
NC_003888.3	RefSeq	gene	1380724	1381131	.	+	.	ID=gene1290;Dbxref=GeneID:1096727;Name=SCBAC36F5.15;gbkey=Gene;gene=SCBAC36F5.15;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.15;locus_tag=SCO1304
NC_003888.3	RefSeq	CDS	1380724	1381131	.	+	0	ID=cds1269;Parent=gene1290;Dbxref=Genbank:NP_625590.1,GeneID:1096727;Name=NP_625590.1;Note=SCBAC36F5.15%2C conserved hypothetical protein%2C len: 135 aa%3B similar to TR:BAB34472 (EMBL:AP002554) Escherichia coli O157:H7 hypothetical 14.7 kDa protein ECS1049%2C 137 aa%3B fasta scores: opt: 401 Z-score: 483.6 bits: 95.2 E(): 2.5e-19%3B 50.376%25 identity in 133 aa overlap. Contains Pfam match to entry PF02629 DUF184%2C Uncharacterized ACR%2C COG1832;gbkey=CDS;gene=SCBAC36F5.15;product=hypothetical protein;protein_id=NP_625590.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1380781	1381098	.	+	.	ID=id1613;Dbxref=GeneID:1096727;Note=Pfam match to entry PF02629 DUF184%2C Uncharacterized ACR%2C COG1832%2C score 84.10%2C E-value 2.8e-21;gbkey=misc_feature;gene=SCBAC36F5.15
NC_003888.3	RefSeq	gene	1381144	1382538	.	-	.	ID=gene1291;Dbxref=GeneID:1096728;Name=SCBAC36F5.16c;gbkey=Gene;gene=SCBAC36F5.16c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.16c;locus_tag=SCO1305
NC_003888.3	RefSeq	CDS	1381144	1382538	.	-	0	ID=cds1270;Parent=gene1291;Dbxref=Genbank:NP_625591.1,GeneID:1096728;Name=NP_625591.1;Note=SCBAC36F5.16c%2C conserved hypothetical protein%2C len: 464 aa%3B low similarity to SW:Y929_THEMA (EMBL:U24145) Thermotoga maritima hypothetical protein TM0929%2C 397 aa%3B fasta scores: opt: 253 Z-score: 253.9 bits: 56.1 E(): 1.6e-06%3B 25.789%25 identity in 380 aa overlap. Contains match to Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature and a 6x degenerate repeat: KP(P/M);gbkey=CDS;gene=SCBAC36F5.16c;product=hypothetical protein;protein_id=NP_625591.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1382164	1382193	.	-	.	ID=id1614;Dbxref=GeneID:1096728;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SCBAC36F5.16c
NC_003888.3	RefSeq	repeat_region	1382464	1382517	.	-	.	ID=id1615;Dbxref=GeneID:1096728;Note=6x degenerate repeat translated in SCBAC36F5.16c;gbkey=repeat_region;gene=SCBAC36F5.16c
NC_003888.3	RefSeq	gene	1382544	1383788	.	-	.	ID=gene1292;Dbxref=GeneID:1096729;Name=SCBAC36F5.17c;gbkey=Gene;gene=SCBAC36F5.17c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.17c;locus_tag=SCO1306
NC_003888.3	RefSeq	CDS	1382544	1383788	.	-	0	ID=cds1271;Parent=gene1292;Dbxref=Genbank:NP_625592.1,GeneID:1096729;Name=NP_625592.1;Note=SCBAC36F5.17c%2C conserved hypothetical protein%2C len: 414 aa%3B low similarity to TR:Q9RV59 (EMBL:AE001966) Deinococcus radiodurans conserved hypothetical protein DR1171%2C 340 aa%3B fasta scores: opt: 365 Z-score: 391.7 bits: 81.2 E(): 3.3e-14%3B 34.637%25 identity in 358 aa overlap;gbkey=CDS;gene=SCBAC36F5.17c;product=hypothetical protein;protein_id=NP_625592.1;transl_table=11
NC_003888.3	RefSeq	gene	1383886	1385292	.	-	.	ID=gene1293;Dbxref=GeneID:1096730;Name=SCBAC36F5.18c;gbkey=Gene;gene=SCBAC36F5.18c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.18c;locus_tag=SCO1307
NC_003888.3	RefSeq	CDS	1383886	1385292	.	-	0	ID=cds1272;Parent=gene1293;Dbxref=Genbank:NP_625593.1,GeneID:1096730;Name=NP_625593.1;Note=SCBAC36F5.18c%2C unknown%2C len: 468 aa;gbkey=CDS;gene=SCBAC36F5.18c;product=hypothetical protein;protein_id=NP_625593.1;transl_table=11
NC_003888.3	RefSeq	gene	1385454	1386677	.	+	.	ID=gene1294;Dbxref=GeneID:1096731;Name=SCBAC36F5.19;gbkey=Gene;gene=SCBAC36F5.19;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.19;locus_tag=SCO1308
NC_003888.3	RefSeq	CDS	1385454	1386677	.	+	0	ID=cds1273;Parent=gene1294;Dbxref=Genbank:NP_625594.1,GeneID:1096731;Name=NP_625594.1;Note=catalyzes the formation of protocatechuate from 4-hydroxybenzoate;gbkey=CDS;gene=SCBAC36F5.19;product=4-hydroxybenzoate 3-monooxygenase;protein_id=NP_625594.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1385505	1385909	.	+	.	ID=id1616;Dbxref=GeneID:1096731;Note=Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain%2C score 27.50%2C E-value 1.4e-06;gbkey=misc_feature;gene=SCBAC36F5.19
NC_003888.3	RefSeq	sequence_feature	1385949	1386530	.	+	.	ID=id1617;Dbxref=GeneID:1096731;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 121.60%2C E-value 1.5e-32;gbkey=misc_feature;gene=SCBAC36F5.19
NC_003888.3	RefSeq	gene	1386707	1387054	.	-	.	ID=gene1295;Dbxref=GeneID:1096732;Name=SCBAC36F5.20c;gbkey=Gene;gene=SCBAC36F5.20c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.20c;locus_tag=SCO1309
NC_003888.3	RefSeq	CDS	1386707	1387054	.	-	0	ID=cds1274;Parent=gene1295;Dbxref=Genbank:NP_625595.1,GeneID:1096732;Name=NP_625595.1;Note=SCBAC36F5.20c%2C possible regulatory protein%2C len: 115 aa%3B similar to TR:O53838 (EMBL:AL022004) Mycobacterium tuberculosis  transcriptional regulator RV0827c or MTV043.19c%2C 130 aa%3B fasta scores: opt: 243 Z-score: 311.9 bits: 63.2 E(): 9.2e-10%3B 39.252%25 identity in 107 aa overlap;gbkey=CDS;gene=SCBAC36F5.20c;product=regulatory protein;protein_id=NP_625595.1;transl_table=11
NC_003888.3	RefSeq	gene	1387179	1388270	.	+	.	ID=gene1296;Dbxref=GeneID:1096733;Name=SCBAC36F5.21;gbkey=Gene;gene=SCBAC36F5.21;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.21;locus_tag=SCO1310
NC_003888.3	RefSeq	CDS	1387179	1388270	.	+	0	ID=cds1275;Parent=gene1296;Dbxref=Genbank:NP_625596.1,GeneID:1096733;Name=NP_625596.1;Note=SCBAC36F5.21%2C possible cation efflux system protein%2C len: 363 aa%3B similar to TR:AAK46363 (EMBL:AE007059) Mycobacterium tuberculosis CDC1551 MT2084%2C 332 aa%3B fasta scores: opt: 1199 Z-score: 1252.9 bits: 240.3 E(): 3.6e-62%3B 59.627%25 identity in 322 aa overlap. Contains Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC36F5.21;product=cation efflux system protein;protein_id=NP_625596.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1387191	1387259	.	+	.	ID=id1618;Dbxref=GeneID:1096733;Note=high content region on histidine amino acid residues;gbkey=misc_feature;gene=SCBAC36F5.21
NC_003888.3	RefSeq	sequence_feature	1387389	1388225	.	+	.	ID=id1619;Dbxref=GeneID:1096733;Note=Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family%2C score 249.00%2C E-value 6.4e-71;gbkey=misc_feature;gene=SCBAC36F5.21
NC_003888.3	RefSeq	gene	1388275	1388832	.	-	.	ID=gene1297;Dbxref=GeneID:1096734;Name=SCBAC36F5.22c;gbkey=Gene;gene=SCBAC36F5.22c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.22c;locus_tag=SCO1311
NC_003888.3	RefSeq	CDS	1388275	1388832	.	-	0	ID=cds1276;Parent=gene1297;Dbxref=Genbank:NP_625597.1,GeneID:1096734;Name=NP_625597.1;Note=SCBAC36F5.22c%2C conserved hypothetical protein%2C len: 185 aa%3B similar to TR:Q9I1H4 (EMBL:AE004656) Pseudomonas aeruginosa hypothetical protein PA2301%2C 180 aa%3B fasta scores: opt: 386 Z-score: 464.0 bits: 92.5 E(): 3.1e-18%3B 44.118%25 identity in 170 aa overlap;gbkey=CDS;gene=SCBAC36F5.22c;product=hypothetical protein;protein_id=NP_625597.1;transl_table=11
NC_003888.3	RefSeq	gene	1388876	1389481	.	-	.	ID=gene1298;Dbxref=GeneID:1096735;Name=SCBAC36F5.23c;gbkey=Gene;gene=SCBAC36F5.23c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.23c;locus_tag=SCO1312
NC_003888.3	RefSeq	CDS	1388876	1389481	.	-	0	ID=cds1277;Parent=gene1298;Dbxref=Genbank:NP_625598.1,GeneID:1096735;Name=NP_625598.1;Note=SCBAC36F5.23c%2C probable transcriptional regulatory protein%2C len: 201 aa%3B similar to TR:Q9I1G3 (EMBL:AE004657) Pseudomonas aeruginosa probable transcriptional regulator PA2312%2C 193 aa%3B fasta scores: opt: 339 Z-score: 397.1 bits: 80.3 E(): 1.6e-14%3B 35.519%25 identity in 183 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and two possible helix-turn-helix domains at residues 35..56 (+2.92 SD) and 64..85 (+4.24 SD);gbkey=CDS;gene=SCBAC36F5.23c;product=transcriptional regulator;protein_id=NP_625598.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1389242	1389406	.	-	.	ID=id1620;Dbxref=GeneID:1096735;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 55.80%2C E-value 9.5e-13;gbkey=misc_feature;gene=SCBAC36F5.23c
NC_003888.3	RefSeq	ribosome_entry_site	1389554	1389557	.	+	.	ID=id1621;gbkey=RBS
NC_003888.3	RefSeq	gene	1389568	1390425	.	+	.	ID=gene1299;Dbxref=GeneID:1096736;Name=SCBAC36F5.24;gbkey=Gene;gene=SCBAC36F5.24;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.24;locus_tag=SCO1313
NC_003888.3	RefSeq	CDS	1389568	1390425	.	+	0	ID=cds1278;Parent=gene1299;Dbxref=Genbank:NP_625599.1,GeneID:1096736;Name=NP_625599.1;Note=SCBAC36F5.24%2C possible integral membrane protein%2C len: 285 aa%3B similar to TR:Q9RRQ1 (EMBL:AE002073) Deinococcus radiodurans hypothetical 27.6 kDa protein DR2437%2C 278 aa%3B fasta scores: opt: 307 Z-score: 316.3 bits: 66.4 E(): 5.2e-10%3B 35.052%25 identity in 291 aa overlap. Contains 2x Pfam matches to entry PF00892 DUF6%2C Integral membrane protein DUF6 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC36F5.24;product=hypothetical protein;protein_id=NP_625599.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1389598	1389963	.	+	.	ID=id1622;Dbxref=GeneID:1096736;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 34.60%2C E-value 2.3e-06;gbkey=misc_feature;gene=SCBAC36F5.24
NC_003888.3	RefSeq	sequence_feature	1390018	1390419	.	+	.	ID=id1623;Dbxref=GeneID:1096736;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 29.10%2C E-value 0.0001;gbkey=misc_feature;gene=SCBAC36F5.24
NC_003888.3	RefSeq	gene	1390456	1391259	.	-	.	ID=gene1300;Dbxref=GeneID:1096737;Name=SCBAC36F5.25c;gbkey=Gene;gene=SCBAC36F5.25c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.25c;locus_tag=SCO1314
NC_003888.3	RefSeq	CDS	1390456	1391259	.	-	0	ID=cds1279;Parent=gene1300;Dbxref=Genbank:NP_625600.1,GeneID:1096737;Name=NP_625600.1;Note=SCBAC36F5.25c%2C possible sugar acetyltransferase%2C len: 267 aa%3B middle region similar to SW:MAA_ECOLI (EMBL:) Escherichia coli maltose O-acetyltransferase (EC 2.3.1.79) Maa or B0459%2C 182 aa%3B fasta scores: opt: 264 Z-score: 295.9 bits: 61.9 E(): 7.2e-09%3B 36.735%25 identity in 147 aa overlap. Contains 5x Pfam matches to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats);gbkey=CDS;gene=SCBAC36F5.25c;product=sugar acetyltransferase;protein_id=NP_625600.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1390699	1390752	.	-	.	ID=id1624;Dbxref=GeneID:1096737;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 15.70%2C E-value 1.1;gbkey=misc_feature;gene=SCBAC36F5.25c
NC_003888.3	RefSeq	sequence_feature	1390753	1390806	.	-	.	ID=id1625;Dbxref=GeneID:1096737;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 13.10%2C E-value 6.9;gbkey=misc_feature;gene=SCBAC36F5.25c
NC_003888.3	RefSeq	sequence_feature	1390867	1390920	.	-	.	ID=id1626;Dbxref=GeneID:1096737;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 13.20%2C E-value 6.1;gbkey=misc_feature;gene=SCBAC36F5.25c
NC_003888.3	RefSeq	sequence_feature	1390927	1390980	.	-	.	ID=id1627;Dbxref=GeneID:1096737;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 6.50%2C E-value 1.2e+02;gbkey=misc_feature;gene=SCBAC36F5.25c
NC_003888.3	RefSeq	sequence_feature	1391017	1391070	.	-	.	ID=id1628;Dbxref=GeneID:1096737;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 7.90%2C E-value 76;gbkey=misc_feature;gene=SCBAC36F5.25c
NC_003888.3	RefSeq	ribosome_entry_site	1391355	1391361	.	+	.	ID=id1629;gbkey=RBS
NC_003888.3	RefSeq	gene	1391367	1391903	.	+	.	ID=gene1301;Dbxref=GeneID:1096738;Name=SCBAC36F5.26;gbkey=Gene;gene=SCBAC36F5.26;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.26;locus_tag=SCO1315
NC_003888.3	RefSeq	CDS	1391367	1391903	.	+	0	ID=cds1280;Parent=gene1301;Dbxref=Genbank:NP_625601.1,GeneID:1096738;Name=NP_625601.1;Note=SCBAC36F5.26%2C possible siderophore binding protein%2C len: 178 aa%3B similar to TR:Q9V158 (EMBL:AJ248284) Pyrococcus abyssi ferripyochelin binding protein Fbp or PAB0393%2C 173 aa%3B fasta scores: opt: 525 Z-score: 583.9 bits: 114.5 E(): 6.5e-25%3B 49.068%25 identity in 161 aa overlap. Contains 4x Pfam matches to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats);gbkey=CDS;gene=SCBAC36F5.26;product=siderophore binding protein;protein_id=NP_625601.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1391460	1391513	.	+	.	ID=id1630;Dbxref=GeneID:1096738;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 5.20%2C E-value 1.7e+02;gbkey=misc_feature;gene=SCBAC36F5.26
NC_003888.3	RefSeq	sequence_feature	1391523	1391576	.	+	.	ID=id1631;Dbxref=GeneID:1096738;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 5.00%2C E-value 1.8e+02;gbkey=misc_feature;gene=SCBAC36F5.26
NC_003888.3	RefSeq	sequence_feature	1391589	1391642	.	+	.	ID=id1632;Dbxref=GeneID:1096738;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 14.40%2C E-value 2.8;gbkey=misc_feature;gene=SCBAC36F5.26
NC_003888.3	RefSeq	sequence_feature	1391658	1391711	.	+	.	ID=id1633;Dbxref=GeneID:1096738;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 17.40%2C E-value 0.35;gbkey=misc_feature;gene=SCBAC36F5.26
NC_003888.3	RefSeq	gene	1391967	1392602	.	-	.	ID=gene1302;Dbxref=GeneID:1096739;Name=SCBAC36F5.27c;gbkey=Gene;gene=SCBAC36F5.27c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.27c;locus_tag=SCO1316
NC_003888.3	RefSeq	CDS	1391967	1392602	.	-	0	ID=cds1281;Parent=gene1302;Dbxref=Genbank:NP_625602.1,GeneID:1096739;Name=NP_625602.1;Note=SCBAC36F5.27c%2C possible integral membrane protein%2C len: 211 aa%3B similar to SW:YQ37_MYCTU (EMBL:Z80225) Mycobacterium tuberculosis hypothetical 23.0 kDa protein RV2637%2C 218 aa%3B fasta scores: opt: 833 Z-score: 928.0 bits: 178.8 E(): 4.4e-44%3B 58.706%25 identity in 201 aa overlap. Contains Pfam match to entry PF00597 DedA%2C DedA family and match to Prosite entry PS00606 Beta-ketoacyl synthases active site. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC36F5.27c;product=hypothetical protein;protein_id=NP_625602.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1392069	1392554	.	-	.	ID=id1634;Dbxref=GeneID:1096739;Note=Pfam match to entry PF00597 DedA%2C DedA family%2C score 39.40%2C E-value 8.1e-08;gbkey=misc_feature;gene=SCBAC36F5.27c
NC_003888.3	RefSeq	sequence_feature	1392405	1392455	.	-	.	ID=id1635;Dbxref=GeneID:1096739;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=SCBAC36F5.27c
NC_003888.3	RefSeq	ribosome_entry_site	1392611	1392615	.	-	.	ID=id1636;gbkey=RBS
NC_003888.3	RefSeq	gene	1392691	1393128	.	-	.	ID=gene1303;Dbxref=GeneID:1096740;Name=SCBAC36F5.28c;gbkey=Gene;gene=SCBAC36F5.28c;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.28c;locus_tag=SCO1317
NC_003888.3	RefSeq	CDS	1392691	1393128	.	-	0	ID=cds1282;Parent=gene1303;Dbxref=Genbank:NP_625603.1,GeneID:1096740;Name=NP_625603.1;Note=SCBAC36F5.28c%2C conserved hypothetical protein%2C len: 145 aa%3B similar to TR:Q9RSU3 (EMBL:AE002039) Deinococcus radiodurans hypothetical 196.9 kDa protein DR2030%2C 159 aa%3B fasta scores: opt: 222 Z-score: 270.7 bits: 56.2 E(): 1.8e-07%3B 36.296%25 identity in 135 aa overlap;gbkey=CDS;gene=SCBAC36F5.28c;product=hypothetical protein;protein_id=NP_625603.1;transl_table=11
NC_003888.3	RefSeq	gene	1393213	1394196	.	+	.	ID=gene1304;Dbxref=GeneID:1096741;Name=SCBAC36F5.29;gbkey=Gene;gene=SCBAC36F5.29;gene_biotype=protein_coding;gene_synonym=SCBAC36F5.29;locus_tag=SCO1318
NC_003888.3	RefSeq	CDS	1393213	1394196	.	+	0	ID=cds1283;Parent=gene1304;Dbxref=Genbank:NP_625604.1,GeneID:1096741;Name=NP_625604.1;Note=SCBAC36F5.29%2C membrane protein%2C len: 327 aa%3B C-terminal region similar to TR:Q9K414 (EMBL:AL359949) Streptomyces coelicolor hypothetical 18.8 kDa protein (fragment) 2SCG61.01%2C 174 aa%3B fasta scores: opt: 528 Z-score: 469.6 bits: 94.3 E(): 1.5e-18%3B 46.429%25 identity in 168 aa overlap. Contains possible hydrophobic membrane spanning region in N-terminal domain;gbkey=CDS;gene=SCBAC36F5.29;product=hypothetical protein;protein_id=NP_625604.1;transl_table=11
NC_003888.3	RefSeq	gene	1394273	1395295	.	+	.	ID=gene1305;Dbxref=GeneID:1096742;Name=2SCG61.01;gbkey=Gene;gene=2SCG61.01;gene_biotype=protein_coding;gene_synonym=2SCG61.01,SCBAC36F5.30;locus_tag=SCO1319
NC_003888.3	RefSeq	CDS	1394273	1395295	.	+	0	ID=cds1284;Parent=gene1305;Dbxref=Genbank:NP_733530.1,GeneID:1096742;Name=NP_733530.1;Note=2SCG61.01%2C unknown%2C partial CDS%2C len: >174 aa~SCBAC36F5.30%2C membrane protein (fragment)%2C len: >199 aa%3B similar to N-terminal region of TR:O88067 (EMBL:AL031541) Streptomyces coelicolor membrane protein SCI35.32c%2C 319 aa%3B fasta scores: opt: 227 Z-score: 214.6 bits: 47.2 E(): 0.00024%3B 33.333%25 identity in 162 aa overlap and to N-terminal region of Streptomyces coelicolor hypothetical protein SCBAC36F5.29%2C 327 aa%3B fasta scores: opt: 337 Z-score: 288.4 bits: 60.9 E(): 2.4e-10%3B 47.291%25 identity in 203 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCG61.01;product=hypothetical protein;protein_id=NP_733530.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1394279	1394446	.	+	.	ID=id1637;Dbxref=GeneID:1096742;Note=region with high content on glutamine and proline amino acid residues;gbkey=misc_feature;gene=2SCG61.01
NC_003888.3	RefSeq	gene	1395319	1396164	.	-	.	ID=gene1306;Dbxref=GeneID:1096743;Name=2SCG61.02c;gbkey=Gene;gene=2SCG61.02c;gene_biotype=protein_coding;gene_synonym=2SCG61.02c;locus_tag=SCO1320
NC_003888.3	RefSeq	CDS	1395319	1396164	.	-	0	ID=cds1285;Parent=gene1306;Dbxref=Genbank:NP_625605.1,GeneID:1096743;Name=NP_625605.1;Note=2SCG61.02c%2C unknown%2C len: 281 aa%3B contains region of alignment with TR:CAB84350 (EMBL:AL162755) transferase from Neisseria meningitidis (263 aa) fasta scores%3B opt: 184%2C z-score: 212.1%2C E(): 0.00025%2C 27.7%25 identity in 148 aa overlap;gbkey=CDS;gene=2SCG61.02c;product=hypothetical protein;protein_id=NP_625605.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1396209	1397477	.	-	.	ID=id1638;Note=Region previously sequenced as EMBL:X77040;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1396238	1397416	.	-	.	ID=gene1307;Dbxref=GeneID:1096744;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;gene_synonym=tuf;locus_tag=SCO1321
NC_003888.3	RefSeq	CDS	1396238	1397416	.	-	0	ID=cds1286;Parent=gene1307;Dbxref=Genbank:NP_625606.1,GeneID:1096744;Name=NP_625606.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=NP_625606.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1396298	1397389	.	-	.	ID=id1639;Dbxref=GeneID:1096744;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family%2C score 461.50%2C E-value 7.1e-135;gbkey=misc_feature;gene=tuf
NC_003888.3	RefSeq	sequence_feature	1397210	1397257	.	-	.	ID=id1640;Dbxref=GeneID:1096744;Note=PS00301 GTP-binding elongation factors signature;gbkey=misc_feature;gene=tuf
NC_003888.3	RefSeq	sequence_feature	1397339	1397362	.	-	.	ID=id1641;Dbxref=GeneID:1096744;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=tuf
NC_003888.3	RefSeq	ribosome_entry_site	1397423	1397427	.	-	.	ID=id1642;gbkey=RBS
NC_003888.3	RefSeq	gene	1397508	1398413	.	-	.	ID=gene1308;Dbxref=GeneID:1096745;Name=2SCG61.04c;gbkey=Gene;gene=2SCG61.04c;gene_biotype=protein_coding;gene_synonym=2SCG61.04c;locus_tag=SCO1322
NC_003888.3	RefSeq	CDS	1397508	1398413	.	-	0	ID=cds1287;Parent=gene1308;Dbxref=Genbank:NP_625607.1,GeneID:1096745;Name=NP_625607.1;Note=2SCG61.04c%2C unknown%2C len: 301aa%3B contains a serine-rich region.;gbkey=CDS;gene=2SCG61.04c;product=hypothetical protein;protein_id=NP_625607.1;transl_table=11
NC_003888.3	RefSeq	gene	1398463	1399239	.	+	.	ID=gene1309;Dbxref=GeneID:1096746;Name=2SCG61.05c;gbkey=Gene;gene=2SCG61.05c;gene_biotype=protein_coding;gene_synonym=2SCG61.05c;locus_tag=SCO1323
NC_003888.3	RefSeq	CDS	1398463	1399239	.	+	0	ID=cds1288;Parent=gene1309;Dbxref=Genbank:NP_625608.1,GeneID:1096746;Name=NP_625608.1;Note=2SCG61.05c%2C possible integral membrane protein%2C len: 258aa%3B similar to many eg. TR:Q9RKH4 (EMBL:AL133252) integral membrane protein from Streptomyces coelicolor (249 aa) fasta scores%3B opt: 353%2C z-score: 396.9%2C E(): 1.2e-14%2C 33.2%25 identity in 244 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SCG61.05c;product=hypothetical protein;protein_id=NP_625608.1;transl_table=11
NC_003888.3	RefSeq	gene	1399280	1400449	.	-	.	ID=gene1310;Dbxref=GeneID:1096747;Name=2SCG61.06c;gbkey=Gene;gene=2SCG61.06c;gene_biotype=protein_coding;gene_synonym=2SCG61.06c;locus_tag=SCO1324
NC_003888.3	RefSeq	CDS	1399280	1400449	.	-	0	ID=cds1289;Parent=gene1310;Dbxref=Genbank:NP_625609.1,GeneID:1096747;Name=NP_625609.1;Note=2SCG61.06c%2C possible 3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase%2C len: 389 aa%3B similar to many e.g. SW:P21151 (THIK_ECOLI) 3-ketoacyl-CoA thiolase (EC 2.3.1.16)from Escherichia coli (387 aa) fasta scores%3B opt: 892%2C z-score: 980.9%2C E(): 0%2C 42.7%25 identity in 403 aa overlap and SW:P54810 (THIL_PARDE) acetyl-CoA acetyltransferase (EC 2.3.1.9) from Paracoccus denitrificans (391 aa) fasta scores%3B opt: 892%2C z-score: 980.9%2C E(): 0%2C 41.7%25 identity in 403 aa overlap. Contains Pfam match to entry PF00108 thiolase%2C Thiolase and Prosite match to PS00737 Thiolases signature 2.;gbkey=CDS;gene=2SCG61.06c;product=3-ketoacyl-CoA thiolase;protein_id=NP_625609.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1399283	1400449	.	-	.	ID=id1643;Dbxref=GeneID:1096747;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2C score 492.90%2C E-value 2.5e-144;gbkey=misc_feature;gene=2SCG61.06c
NC_003888.3	RefSeq	sequence_feature	1399397	1399447	.	-	.	ID=id1644;Dbxref=GeneID:1096747;Note=PS00737 Thiolases signature 2;gbkey=misc_feature;gene=2SCG61.06c
NC_003888.3	RefSeq	ribosome_entry_site	1400458	1400462	.	-	.	ID=id1645;gbkey=RBS
NC_003888.3	RefSeq	gene	1400584	1401057	.	+	.	ID=gene1311;Dbxref=GeneID:1096748;Name=2SCG61.07;gbkey=Gene;gene=2SCG61.07;gene_biotype=protein_coding;gene_synonym=2SCG61.07;locus_tag=SCO1325
NC_003888.3	RefSeq	CDS	1400584	1401057	.	+	0	ID=cds1290;Parent=gene1311;Dbxref=Genbank:NP_625610.1,GeneID:1096748;Name=NP_625610.1;Note=2SCG61.07%2C conserved hypothetical protein%2C len: 157 aa%3B similar to many e.g. SW:O05774 (YU95_MYCTU) hypothetical protein from Mycobacterium tuberculosis (158 aa) fasta scores%3B opt: 407%2C z-score: 510.5%2C E(): 5.9e-21%2C 43.9%25 identity in 139 aa overlap and TR:Q9RD98 (EMBL:AL136058) conserved hypothetical protein from Streptomyces coelicolor (184 aa) fasta scores%3B opt: 337%2C z-score: 423.9%2C E(): 3.9e-16%2C 42.1%25 identity in 140 aa overlap. Contains Pfam match to entry PF01638 DUF24%2C Protein of unknown function;gbkey=CDS;gene=2SCG61.07;product=hypothetical protein;protein_id=NP_625610.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1400638	1400907	.	+	.	ID=id1646;Dbxref=GeneID:1096748;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function%2C score 71.60%2C E-value 1.6e-17;gbkey=misc_feature;gene=2SCG61.07
NC_003888.3	RefSeq	gene	1401207	1402082	.	+	.	ID=gene1312;Dbxref=GeneID:1096749;Name=uppP;gbkey=Gene;gene=uppP;gene_biotype=protein_coding;gene_synonym=2SCG61.08;locus_tag=SCO1326
NC_003888.3	RefSeq	CDS	1401207	1402082	.	+	0	ID=cds1291;Parent=gene1312;Dbxref=Genbank:NP_625611.1,GeneID:1096749;Name=NP_625611.1;Note=phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;gene=uppP;product=UDP pyrophosphate phosphatase;protein_id=NP_625611.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1402113	1411725	.	+	.	ID=id1647;Note=Region of low G+C content;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	1402561	1402565	.	+	.	ID=id1648;gbkey=RBS
NC_003888.3	RefSeq	gene	1402574	1403737	.	+	.	ID=gene1313;Dbxref=GeneID:1096750;Name=2SCG61.09;gbkey=Gene;gene=2SCG61.09;gene_biotype=protein_coding;gene_synonym=2SCG61.09;locus_tag=SCO1327
NC_003888.3	RefSeq	CDS	1402574	1403737	.	+	0	ID=cds1292;Parent=gene1313;Dbxref=Genbank:NP_625612.1,GeneID:1096750;Name=NP_625612.1;Note=2SCG61.09%2C possible integral membrane protein%2C len: 387 aa%3B similar to many predicted integral membrane protein especially others from Streptomyces coelicolor e.g. TR:CAB69689 (EMBL:AL137165)  integral membrane protein (375 aa) fasta scores%3B opt: 481%2C z-score: 562.8%2C E(): 7.2e-24%2C 35.7%25 identity in 387 aa overlap. Contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=2SCG61.09;product=hypothetical protein;protein_id=NP_625612.1;transl_table=11
NC_003888.3	RefSeq	gene	1403709	1404566	.	-	.	ID=gene1314;Dbxref=GeneID:1096751;Name=2SCG61.10c;gbkey=Gene;gene=2SCG61.10c;gene_biotype=protein_coding;gene_synonym=2SCG61.10c;locus_tag=SCO1328
NC_003888.3	RefSeq	CDS	1403709	1404566	.	-	0	ID=cds1293;Parent=gene1314;Dbxref=Genbank:NP_625613.1,GeneID:1096751;Name=NP_625613.1;Note=2SCG61.10c%2C unknown%2C len: 285aa;gbkey=CDS;gene=2SCG61.10c;product=hypothetical protein;protein_id=NP_625613.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1404575	1404581	.	-	.	ID=id1649;gbkey=RBS
NC_003888.3	RefSeq	gene	1404801	1405034	.	-	.	ID=gene1315;Dbxref=GeneID:1096752;Name=2SCG61.11c;gbkey=Gene;gene=2SCG61.11c;gene_biotype=protein_coding;gene_synonym=2SCG61.11c;locus_tag=SCO1329
NC_003888.3	RefSeq	CDS	1404801	1405034	.	-	0	ID=cds1294;Parent=gene1315;Dbxref=Genbank:NP_625614.1,GeneID:1096752;Name=NP_625614.1;Note=2SCG61.11c%2C unknown%2C len: 77aa;gbkey=CDS;gene=2SCG61.11c;product=hypothetical protein;protein_id=NP_625614.1;transl_table=11
NC_003888.3	RefSeq	gene	1405031	1406113	.	-	.	ID=gene1316;Dbxref=GeneID:1096753;Name=2SCG61.12c;gbkey=Gene;gene=2SCG61.12c;gene_biotype=protein_coding;gene_synonym=2SCG61.12c;locus_tag=SCO1330
NC_003888.3	RefSeq	CDS	1405031	1406113	.	-	0	ID=cds1295;Parent=gene1316;Dbxref=Genbank:NP_625615.1,GeneID:1096753;Name=NP_625615.1;Note=2SCG61.12c%2C possible fatty acid CoA ligase%2C len: 360aa%3B region similar to many possible fatty acid coA ligases eg. TR:Q9ZIP5 (EMBL:AF117694) malonyl CoA synthetase from Rhizobium trifolii (504 aa) fasta scores%3B opt: 198%2C z-score: 230.9%2C E(): 2.2e-05%2C 28.6%25 identity in 203 aa overlap.;gbkey=CDS;gene=2SCG61.12c;product=fatty acid CoA ligase;protein_id=NP_625615.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1405040	1405046	.	-	.	ID=id1650;Dbxref=GeneID:1096753;gbkey=RBS;gene=2SCG61.12c
NC_003888.3	RefSeq	gene	1406138	1408480	.	+	.	ID=gene1317;Dbxref=GeneID:1096754;Name=2SCG61.13;gbkey=Gene;gene=2SCG61.13;gene_biotype=protein_coding;gene_synonym=2SCG61.13;locus_tag=SCO1331
NC_003888.3	RefSeq	CDS	1406138	1408480	.	+	0	ID=cds1296;Parent=gene1317;Dbxref=Genbank:NP_625616.1,GeneID:1096754;Name=NP_625616.1;Note=2SCG61.13%2C possible multi-domain regulatory protein%2C len: 780aa%3B similar to proposed regulatory proteins eg. TR:Q11028 (EMBL:Z75555) probable transcriptional regulatory protein from Mycobacterium tuberculosis (1159 aa) fasta scores%3B opt: 743%2C z-score: 848.5%2C E(): 0%2C 31.1%25 identity in 903 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).Also contains a TTA encoded leucine amino acid at residue 649 (possible target for bldA regulation) which may allow for expression of the protein without the C-terminal domain.;gbkey=CDS;gene=2SCG61.13;product=multidomain-containing protein family;protein_id=NP_625616.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1406285	1406308	.	+	.	ID=id1651;Dbxref=GeneID:1096754;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCG61.13
NC_003888.3	RefSeq	sequence_feature	1408082	1408084	.	+	.	ID=id1652;Dbxref=GeneID:1096754;Note=TTA encoded leucine amino acid at residue 649 of CDS 2SCG61.13 (possible target for bldA regulation);gbkey=misc_feature;gene=2SCG61.13
NC_003888.3	RefSeq	sequence_feature	1408280	1408477	.	+	.	ID=id1653;Dbxref=GeneID:1096754;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 64.40%2C E-value 2.5e-15;gbkey=misc_feature;gene=2SCG61.13
NC_003888.3	RefSeq	gene	1408850	1409722	.	-	.	ID=gene1318;Dbxref=GeneID:1096755;Name=2SCG61.14c;gbkey=Gene;gene=2SCG61.14c;gene_biotype=protein_coding;gene_synonym=2SCG61.14c;locus_tag=SCO1332
NC_003888.3	RefSeq	CDS	1408850	1409722	.	-	0	ID=cds1297;Parent=gene1318;Dbxref=Genbank:NP_625617.1,GeneID:1096755;Name=NP_625617.1;Note=2SCG61.14c%2C unknown%2C len: 290 aa%3B similar to TR:Q9Z9I2 (EMBL:AB024056) unknown protein from Streptomyces fradiae (306 aa) fasta scores%3B opt: 705%2C z-score: 786.1%2C E(): 0%2C 45.9%25 identity in 259 aa overlap and TR:CAB92673 (EMBL:AL356832) hypothetical protein from Streptomyces coelicolor (342 aa) fasta scores%3B opt: 577%2C z-score: 644.3%2C E(): 2.1e-28%2C 43.6%25 identity in 280 aa overlap;gbkey=CDS;gene=2SCG61.14c;product=hypothetical protein;protein_id=NP_625617.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1409729	1409736	.	-	.	ID=id1654;gbkey=RBS
NC_003888.3	RefSeq	gene	1410027	1410995	.	+	.	ID=gene1319;Dbxref=GeneID:1096756;Name=2SCG61.15;gbkey=Gene;gene=2SCG61.15;gene_biotype=protein_coding;gene_synonym=2SCG61.15;locus_tag=SCO1333
NC_003888.3	RefSeq	CDS	1410027	1410995	.	+	0	ID=cds1298;Parent=gene1319;Dbxref=Genbank:NP_625618.1,GeneID:1096756;Name=NP_625618.1;Note=2SCG61.15%2C possible integral membrane protein%2C len: 322 aa%3B similar to TR:CAC44603 (EMBL:AL596162) Streptomyces coelicolor  integral membrane protein SCBAC16H6.24c%2C 294 aa%3B fasta scores: opt: 900 Z-score: 871.5 E(): 6.5e-41%3B 52.597%25 identity in 308 aa overlap. Contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=2SCG61.15;product=hypothetical protein;protein_id=NP_625618.1;transl_table=11
NC_003888.3	RefSeq	gene	1411647	1411826	.	+	.	ID=gene1320;Dbxref=GeneID:1096757;Name=2SCG61.16;gbkey=Gene;gene=2SCG61.16;gene_biotype=protein_coding;gene_synonym=2SCG61.16;locus_tag=SCO1334
NC_003888.3	RefSeq	CDS	1411647	1411826	.	+	0	ID=cds1299;Parent=gene1320;Dbxref=Genbank:NP_625619.1,GeneID:1096757;Name=NP_625619.1;Note=2SCG61.16%2C unknown%2C len: 59aa;gbkey=CDS;gene=2SCG61.16;product=hypothetical protein;protein_id=NP_625619.1;transl_table=11
NC_003888.3	RefSeq	gene	1411885	1412625	.	-	.	ID=gene1321;Dbxref=GeneID:1096758;Name=2SCG61.17c;gbkey=Gene;gene=2SCG61.17c;gene_biotype=protein_coding;gene_synonym=2SCG61.17c;locus_tag=SCO1335
NC_003888.3	RefSeq	CDS	1411885	1412625	.	-	0	ID=cds1300;Parent=gene1321;Dbxref=Genbank:NP_625620.1,GeneID:1096758;Name=NP_625620.1;Note=2SCG61.17c%2C probable oxidoreductase%2C len: 246 aa%3B similar to many eg. SW:P40288 (DHG_BACME) glucose 1-dehydrogenase (EC 1.1.1.47) from Bacillus megaterium (261 aa) fasta scores%3B opt: 511%2C z-score: 535.5%2C E(): 2.4e-22%2C 36.6%25 identity in 243 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus.;gbkey=CDS;gene=2SCG61.17c;product=oxidoreductase;protein_id=NP_625620.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1411900	1411992	.	-	.	ID=id1655;Dbxref=GeneID:1096758;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 46.50%2C E-value 1.6e-11;gbkey=misc_feature;gene=2SCG61.17c
NC_003888.3	RefSeq	sequence_feature	1412053	1412616	.	-	.	ID=id1656;Dbxref=GeneID:1096758;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 184.60%2C E-value 1.5e-51;gbkey=misc_feature;gene=2SCG61.17c
NC_003888.3	RefSeq	ribosome_entry_site	1412631	1412636	.	-	.	ID=id1657;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1412764	1412768	.	+	.	ID=id1658;gbkey=RBS
NC_003888.3	RefSeq	gene	1412774	1414348	.	+	.	ID=gene1322;Dbxref=GeneID:1096759;Name=2SCG61.18;gbkey=Gene;gene=2SCG61.18;gene_biotype=protein_coding;gene_synonym=2SCG61.18;locus_tag=SCO1336
NC_003888.3	RefSeq	CDS	1412774	1414348	.	+	0	ID=cds1301;Parent=gene1322;Dbxref=Genbank:NP_625621.1,GeneID:1096759;Name=NP_625621.1;Note=2SCG61.18%2C possible lipoprotein N-acyltransferase (integral membrane)%2C len: 534a%3B similar to many e.g. SW:P23930 (LNT_ECOLI) apolipoprotein N-acyltransferase (EC 2.3.1.-) from Escherichia coli (512 aa) fasta scores%3B opt: 391%2C z-score: 419.0%2C E(): 7.3e-16%2C 27.0%25 identity in 515 aa overlap and TR:O53536 (EMBL:AL021925) hypothetical protein from Mycobacterium tuberculosis (360 aa) fasta scores%3B opt: 955%2C z-score: 1020.2%2C E(): 0%2C 49.2%25 identity in 317 aa overlap. C-terminal portion contains Pfam match to entry PF00795 CN_hydrolase%2C Carbon-nitrogen hydrolase. N-terminal portion contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=2SCG61.18;product=lipoprotein N-acyltransferase (integral membrane);protein_id=NP_625621.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1413425	1414192	.	+	.	ID=id1659;Dbxref=GeneID:1096759;Note=Pfam match to entry PF00795 CN_hydrolase%2C Carbon-nitrogen hydrolase%2C score -52.40%2C E-value 1.1e-05;gbkey=misc_feature;gene=2SCG61.18
NC_003888.3	RefSeq	gene	1414272	1415177	.	-	.	ID=gene1323;Dbxref=GeneID:1096760;Name=2SCG61.19c;gbkey=Gene;gene=2SCG61.19c;gene_biotype=protein_coding;gene_synonym=2SCG61.19c;locus_tag=SCO1337
NC_003888.3	RefSeq	CDS	1414272	1415177	.	-	0	ID=cds1302;Parent=gene1323;Dbxref=Genbank:NP_625622.1,GeneID:1096760;Name=NP_625622.1;Note=2SCG61.19c%2C possible oxidoreductase%2C len: 301 aa%3B similar to SW:P37168 (MVIM_SALTY) virulence factor MviM from Salmonella typhimurium (307 aa) fasta scores%3B opt: 467%2C z-score: 533.5%2C E(): 3.1e-22%2C 33.9%25 identity in 304 aa overlap. Contains Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=2SCG61.19c;product=oxidoreductase;protein_id=NP_625622.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1414515	1415177	.	-	.	ID=id1660;Dbxref=GeneID:1096760;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 77.40%2C E-value 2.9e-19;gbkey=misc_feature;gene=2SCG61.19c
NC_003888.3	RefSeq	ribosome_entry_site	1415186	1415190	.	-	.	ID=id1661;gbkey=RBS
NC_003888.3	RefSeq	gene	1415191	1416381	.	-	.	ID=gene1324;Dbxref=GeneID:1096761;Name=2SCG61.20c;gbkey=Gene;gene=2SCG61.20c;gene_biotype=protein_coding;gene_synonym=2SCG61.20c;locus_tag=SCO1338
NC_003888.3	RefSeq	CDS	1415191	1416381	.	-	0	ID=cds1303;Parent=gene1324;Dbxref=Genbank:NP_625623.1,GeneID:1096761;Name=NP_625623.1;Note=2SCG61.20c%2C possible monooxygenase (hypothetical protein)%2C len: 396 aa%3B similar to many eg. TR:Q9Z4Y6 (EMBL:AL035707)  salicylate hydroxylase from Streptomyces coelicolor (420 aa) fasta scores%3B opt: 505%2C z-score: 556.8%2C E(): 1.5e-23%2C 34.8%25 identity in 391 aa overlap and TR:Q9ZSN7 (EMBL:AF098947) CTF2B from Arabidopsis thaliana (Mouse-ear cress) (428 aa) fasta scores%3B opt: 464%2C z-score: 511.9%2C E(): 4.9e-21%2C 30.8%25 identity in 383 aa overlap. Contains Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain and Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG61.20c;product=monooxygenase;protein_id=NP_625623.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1415380	1415934	.	-	.	ID=id1662;Dbxref=GeneID:1096761;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 112.90%2C E-value 6.1e-30;gbkey=misc_feature;gene=2SCG61.20c
NC_003888.3	RefSeq	sequence_feature	1416010	1416363	.	-	.	ID=id1663;Dbxref=GeneID:1096761;Note=Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain%2C score -5.90%2C E-value 0.0016;gbkey=misc_feature;gene=2SCG61.20c
NC_003888.3	RefSeq	ribosome_entry_site	1416386	1416389	.	-	.	ID=id1664;gbkey=RBS
NC_003888.3	RefSeq	gene	1416484	1417104	.	+	.	ID=gene1325;Dbxref=GeneID:1096762;Name=2SCG61.21;gbkey=Gene;gene=2SCG61.21;gene_biotype=protein_coding;gene_synonym=2SCG61.21;locus_tag=SCO1339
NC_003888.3	RefSeq	CDS	1416484	1417104	.	+	0	ID=cds1304;Parent=gene1325;Dbxref=Genbank:NP_625624.1,GeneID:1096762;Name=NP_625624.1;Note=2SCG61.21%2C hypothetical protein%2C len: 206 aa%3B similar to TR:Q9X9V5 (EMBL:AL096743) hypothetical protein from Streptomyces coelicolor (197 aa) fasta scores%3B opt: 212%2C z-score: 254.4%2C E(): 1.1e-06%2C 33.9%25 identity in 186 aa overlap.;gbkey=CDS;gene=2SCG61.21;product=hypothetical protein;protein_id=NP_625624.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1417136	1417141	.	+	.	ID=id1665;gbkey=RBS
NC_003888.3	RefSeq	gene	1417147	1417659	.	+	.	ID=gene1326;Dbxref=GeneID:1096763;Name=2SCG61.22;gbkey=Gene;gene=2SCG61.22;gene_biotype=protein_coding;gene_synonym=2SCG61.22;locus_tag=SCO1340
NC_003888.3	RefSeq	CDS	1417147	1417659	.	+	0	ID=cds1305;Parent=gene1326;Dbxref=Genbank:NP_625625.1,GeneID:1096763;Name=NP_625625.1;Note=2SCG61.22%2C conserved hypothetical protein%2C len: 170 aa%3B similar to others of unknown function from Streptomyces coelicolor e.g. TR:CAA20815 (EMBL:AL031541) hypothetical protein (175 aa) fasta scores%3B opt: 568%2C z-score: 738.0%2C E(): 0%2C 52.1%25 identity in 169 aa overlap%2C to SW:YM2_STRCO (EMBL:X15942) mini-circle hypothetical 13.3 kD protein (122 aa) fasta scores%3B opt: 366%2C z-score: 482.1%2C E(): 2.2e-19%2C 47.2%25 identity in 123 aa overlap and to TR:Q9AJE6 (EMBL:AB048795) Kitasatospora griseola hypothetical protein%2C 170 aa%3B fasta scores: opt: 614 Z-score: 754.9 E(): 2.1e-34%3B 56.140%25 identity in 171 aa overlap;gbkey=CDS;gene=2SCG61.22;product=hypothetical protein;protein_id=NP_625625.1;transl_table=11
NC_003888.3	RefSeq	gene	1417763	1418269	.	+	.	ID=gene1327;Dbxref=GeneID:1096764;Name=2SCG61.23;gbkey=Gene;gene=2SCG61.23;gene_biotype=protein_coding;gene_synonym=2SCG61.23;locus_tag=SCO1341
NC_003888.3	RefSeq	CDS	1417763	1418269	.	+	0	ID=cds1306;Parent=gene1327;Dbxref=Genbank:NP_625626.1,GeneID:1096764;Name=NP_625626.1;Note=2SCG61.23%2C possible lipoprotein%2C len: 168aa%3B contains an appropriately Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible non-cleavable N-terminal signal sequence.;gbkey=CDS;gene=2SCG61.23;product=lipoprotein;protein_id=NP_625626.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1417805	1417837	.	+	.	ID=id1666;Dbxref=GeneID:1096764;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCG61.23
NC_003888.3	RefSeq	gene	1418317	1418868	.	-	.	ID=gene1328;Dbxref=GeneID:1096765;Name=2SCG61.24c;gbkey=Gene;gene=2SCG61.24c;gene_biotype=protein_coding;gene_synonym=2SCG61.24c;locus_tag=SCO1342
NC_003888.3	RefSeq	CDS	1418317	1418868	.	-	0	ID=cds1307;Parent=gene1328;Dbxref=Genbank:NP_625627.1,GeneID:1096765;Name=NP_625627.1;Note=2SCG61.24c%2C unknown%2C len: 183aa;gbkey=CDS;gene=2SCG61.24c;product=hypothetical protein;protein_id=NP_625627.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1418871	1418878	.	-	.	ID=id1667;gbkey=RBS
NC_003888.3	RefSeq	gene	1418995	1419678	.	-	.	ID=gene1329;Dbxref=GeneID:1096766;Name=2SCG61.25c;gbkey=Gene;gene=2SCG61.25c;gene_biotype=protein_coding;gene_synonym=2SCG61.25c,ung;locus_tag=SCO1343
NC_003888.3	RefSeq	CDS	1418995	1419678	.	-	0	ID=cds1308;Parent=gene1329;Dbxref=Genbank:NP_625628.1,GeneID:1096766;Name=NP_625628.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;gene=2SCG61.25c;product=uracil-DNA glycosylase;protein_id=NP_625628.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1419016	1419555	.	-	.	ID=id1668;Dbxref=GeneID:1096766;Note=Pfam match to entry PF00315 UNG%2C Uracil-DNA glycosylase%2C score 318.80%2C E-value 6.5e-92;gbkey=misc_feature;gene=2SCG61.25c
NC_003888.3	RefSeq	sequence_feature	1419472	1419501	.	-	.	ID=id1669;Dbxref=GeneID:1096766;Note=PS00130 Uracil-DNA glycosylase signature;gbkey=misc_feature;gene=2SCG61.25c
NC_003888.3	RefSeq	ribosome_entry_site	1419683	1419690	.	-	.	ID=id1670;gbkey=RBS
NC_003888.3	RefSeq	gene	1419752	1421344	.	-	.	ID=gene1330;Dbxref=GeneID:1096767;Name=2SCG61.26c;gbkey=Gene;gene=2SCG61.26c;gene_biotype=protein_coding;gene_synonym=2SCG61.26c;locus_tag=SCO1344
NC_003888.3	RefSeq	CDS	1419752	1421344	.	-	0	ID=cds1309;Parent=gene1330;Dbxref=Genbank:NP_625629.1,GeneID:1096767;Name=NP_625629.1;Note=2SCG61.26c%2C possible solute binding transport lipoprotein%2C len: 530aa%3B similar to many eg. TR:Q9RJ53 (EMBL:AL132648) lipoprotein oligopeptide binding protein (534 aa) fasta scores%3B opt: 1438%2C z-score: 1620.4%2C E(): 0%2C 43.4%25 identity in 539 aa overlap and SW:P76128 (YDDS_ECOLI) binding protein YddS precursor (516 aa) fasta scores%3B opt: 532%2C z-score: 600.2%2C E(): 5.9e-26%2C 25.7%25 identity in 517 aa overlap. Contains two Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5 and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=2SCG61.26c;product=solute binding transport lipoprotein;protein_id=NP_625629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1419767	1420150	.	-	.	ID=id1671;Dbxref=GeneID:1096767;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 23.80%2C E-value 7.5e-06;gbkey=misc_feature;gene=2SCG61.26c
NC_003888.3	RefSeq	sequence_feature	1420349	1421329	.	-	.	ID=id1672;Dbxref=GeneID:1096767;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 62.40%2C E-value 1.3e-16;gbkey=misc_feature;gene=2SCG61.26c
NC_003888.3	RefSeq	sequence_feature	1421267	1421299	.	-	.	ID=id1673;Dbxref=GeneID:1096767;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCG61.26c
NC_003888.3	RefSeq	ribosome_entry_site	1421346	1421350	.	-	.	ID=id1674;gbkey=RBS
NC_003888.3	RefSeq	gene	1421547	1422308	.	-	.	ID=gene1331;Dbxref=GeneID:1096768;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;gene_synonym=2SCG61.27c,fabG2;locus_tag=SCO1345
NC_003888.3	RefSeq	CDS	1421547	1422308	.	-	0	ID=cds1310;Parent=gene1331;Dbxref=Genbank:NP_625630.1,GeneID:1096768;Name=NP_625630.1;Note=Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=NP_625630.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1421583	1421675	.	-	.	ID=id1675;Dbxref=GeneID:1096768;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 41.50%2C E-value 4.3e-10;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	1421733	1422281	.	-	.	ID=id1676;Dbxref=GeneID:1096768;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 177.10%2C E-value 2.9e-49;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	1421793	1421879	.	-	.	ID=id1677;Dbxref=GeneID:1096768;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	gene	1422352	1423113	.	-	.	ID=gene1332;Dbxref=GeneID:1096769;Name=2SCG61.28c;gbkey=Gene;gene=2SCG61.28c;gene_biotype=protein_coding;gene_synonym=2SCG61.28c,fabG3;locus_tag=SCO1346
NC_003888.3	RefSeq	CDS	1422352	1423113	.	-	0	ID=cds1311;Parent=gene1332;Dbxref=Genbank:NP_625631.1,GeneID:1096769;Name=NP_625631.1;gbkey=CDS;gene=2SCG61.28c;product=3-oxoacyl-ACP reductase;protein_id=NP_625631.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1422373	1422465	.	-	.	ID=id1678;Dbxref=GeneID:1096769;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 40.10%2C E-value 1.1e-09;gbkey=misc_feature;gene=2SCG61.28c
NC_003888.3	RefSeq	sequence_feature	1422544	1423095	.	-	.	ID=id1679;Dbxref=GeneID:1096769;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 237.50%2C E-value 1.8e-67;gbkey=misc_feature;gene=2SCG61.28c
NC_003888.3	RefSeq	sequence_feature	1422607	1422693	.	-	.	ID=id1680;Dbxref=GeneID:1096769;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=2SCG61.28c
NC_003888.3	RefSeq	ribosome_entry_site	1423123	1423127	.	-	.	ID=id1681;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1423367	1423373	.	+	.	ID=id1682;gbkey=RBS
NC_003888.3	RefSeq	gene	1423379	1424143	.	+	.	ID=gene1333;Dbxref=GeneID:1096770;Name=2SCG61.29;gbkey=Gene;gene=2SCG61.29;gene_biotype=protein_coding;gene_synonym=2SCG61.29;locus_tag=SCO1347
NC_003888.3	RefSeq	CDS	1423379	1424143	.	+	0	ID=cds1312;Parent=gene1333;Dbxref=Genbank:NP_625632.1,GeneID:1096770;Name=NP_625632.1;Note=2SCG61.29%2C possible membrane protein%2C len: 254 aa%3B contains possible N-terminal signal sequence and possible membrane-spanning hydrophobic region at C-terminus.;gbkey=CDS;gene=2SCG61.29;product=hypothetical protein;protein_id=NP_625632.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1424156	1424211	.	+	.	ID=id1683;Note=4x degenerate repeat of (A/G)CAGCGCG(A/T)GCCG(A/G);gbkey=repeat_region
NC_003888.3	RefSeq	gene	1424234	1424617	.	-	.	ID=gene1334;Dbxref=GeneID:1096771;Name=2SCG61.30c;gbkey=Gene;gene=2SCG61.30c;gene_biotype=protein_coding;gene_synonym=2SCG61.30c;locus_tag=SCO1348
NC_003888.3	RefSeq	CDS	1424234	1424617	.	-	0	ID=cds1313;Parent=gene1334;Dbxref=Genbank:NP_625633.1,GeneID:1096771;Name=NP_625633.1;Note=2SCG61.30c%2C unknown%2C len: 298aa;gbkey=CDS;gene=2SCG61.30c;product=hypothetical protein;protein_id=NP_625633.1;transl_table=11
NC_003888.3	RefSeq	gene	1424614	1425369	.	-	.	ID=gene1335;Dbxref=GeneID:1096772;Name=2SCG61.31c;gbkey=Gene;gene=2SCG61.31c;gene_biotype=protein_coding;gene_synonym=2SCG61.31c;locus_tag=SCO1349
NC_003888.3	RefSeq	CDS	1424614	1425369	.	-	0	ID=cds1314;Parent=gene1335;Dbxref=Genbank:NP_625634.1,GeneID:1096772;Name=NP_625634.1;Note=2SCG61.31c%2C hypothetical protein%2C len: 251aa%3B strongly similar to TR:Q9RCK7 (EMBL:AJ242827) hypothetical protein from Streptomyces tendae (266 aa) fasta scores%3B opt: 1417%2C z-score: 167%2C3.0 E(): 0%2C 84.3%25 identity in 249 aa overlap and TR:Q9RKV0 (EMBL:AL132824) hypothetical protein from Streptomyces coelicolor (304 aa) fasta scores%3B opt: 728%2C z-score: 862.7%2C E(): 0%2C 55.5%25 identity in 247 aa overlap;gbkey=CDS;gene=2SCG61.31c;product=hypothetical protein;protein_id=NP_625634.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1424621	1424628	.	-	.	ID=id1684;Dbxref=GeneID:1096772;gbkey=RBS;gene=2SCG61.31c
NC_003888.3	RefSeq	gene	1425591	1426211	.	+	.	ID=gene1336;Dbxref=GeneID:1096773;Name=2SCG61.32;gbkey=Gene;gene=2SCG61.32;gene_biotype=protein_coding;gene_synonym=2SCG61.32;locus_tag=SCO1350
NC_003888.3	RefSeq	CDS	1425591	1426211	.	+	0	ID=cds1315;Parent=gene1336;Dbxref=Genbank:NP_625635.1,GeneID:1096773;Name=NP_625635.1;Note=2SCG61.32%2C unknown%2C len: 206 aa%3B weakly similar to others from Streptomyces coelicolor eg. TR:Q9X7Q5 (EMBL:AL049587) hypothetical protein (161 aa) fasta scores%3B opt: 132%2C z-score: 160.8%2C E(): 0.18%2C 32.6%25 identity in 135 aa overlap.;gbkey=CDS;gene=2SCG61.32;product=hypothetical protein;protein_id=NP_625635.1;transl_table=11
NC_003888.3	RefSeq	gene	1426295	1429033	.	+	.	ID=gene1337;Dbxref=GeneID:1096774;Name=2SCG61.33;gbkey=Gene;gene=2SCG61.33;gene_biotype=protein_coding;gene_synonym=2SCG61.33;locus_tag=SCO1351
NC_003888.3	RefSeq	CDS	1426295	1429033	.	+	0	ID=cds1316;Parent=gene1337;Dbxref=Genbank:NP_625636.1,GeneID:1096774;Name=NP_625636.1;Note=2SCG61.33%2C possible large transcriptional regulator%2C len: 912 aa%3B similar to many from actinomycetes e.g. TR:Q9Z573 (EMBL:AL035569) regulatory protein from Streptomyces coelicolor (1091 aa) fasta scores%3B opt: 233%2C z-score: 243.0%2C E(): 4.6e-06%2C 26.7%25 identity in 899 aa overlap. C-terminal region contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C Prosite match to PS00622 Bacterial regulatory proteins%2C luxR family signature and a helix-turn-helix motif (residue 867-888). N-terminal region contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=2SCG61.33;product=large transcriptional regulator;protein_id=NP_625636.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1426391	1426414	.	+	.	ID=id1685;Dbxref=GeneID:1096774;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCG61.33
NC_003888.3	RefSeq	sequence_feature	1428839	1429030	.	+	.	ID=id1686;Dbxref=GeneID:1096774;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 57.30%2C E-value 3.3e-13;gbkey=misc_feature;gene=2SCG61.33
NC_003888.3	RefSeq	sequence_feature	1428890	1428973	.	+	.	ID=id1687;Dbxref=GeneID:1096774;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=2SCG61.33
NC_003888.3	RefSeq	gene	1429057	1430469	.	-	.	ID=gene1338;Dbxref=GeneID:1096775;Name=2SCG61.34c;gbkey=Gene;gene=2SCG61.34c;gene_biotype=protein_coding;gene_synonym=2SCG61.34c,pepP;locus_tag=SCO1352
NC_003888.3	RefSeq	CDS	1429057	1430469	.	-	0	ID=cds1317;Parent=gene1338;Dbxref=Genbank:NP_625637.1,GeneID:1096775;Name=NP_625637.1;Note=2SCG61.34c%2C pepP%2C Xaa-Pro aminopeptidase II (EC 3.4.11.9)%2C len: 470aa%3B identical to SW:Q60394 (AMP2_STRLI) from Streptomyces lividans. Similar to many others eg. SW:P15034 (AMPP_ECOLI) Xaa-Pro aminopeptidase II (EC 3.4.11.9) from Escherichia coli (440 aa) fasta scores%3B opt: 689%2C z-score: 807.8%2C E(): 0%2C 34.7%25 identity in 438 aa overlap. Contains Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24 and Prosite match to PS00491 Aminopeptidase P and proline dipeptidase signature.;gbkey=CDS;gene=2SCG61.34c;product=Xaa-Pro aminopeptidase II;protein_id=NP_625637.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1429096	1429872	.	-	.	ID=id1688;Dbxref=GeneID:1096775;Note=Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24%2C score 274.50%2C E-value 1.3e-78;gbkey=misc_feature;gene=2SCG61.34c
NC_003888.3	RefSeq	sequence_feature	1429300	1429338	.	-	.	ID=id1689;Dbxref=GeneID:1096775;Note=PS00491 Aminopeptidase P and proline dipeptidase signature;gbkey=misc_feature;gene=2SCG61.34c
NC_003888.3	RefSeq	ribosome_entry_site	1430535	1430539	.	+	.	ID=id1690;gbkey=RBS
NC_003888.3	RefSeq	gene	1430545	1431576	.	+	.	ID=gene1339;Dbxref=GeneID:1096776;Name=2SCG61.35;gbkey=Gene;gene=2SCG61.35;gene_biotype=protein_coding;gene_synonym=2SCG61.35;locus_tag=SCO1353
NC_003888.3	RefSeq	CDS	1430545	1431576	.	+	0	ID=cds1318;Parent=gene1339;Dbxref=Genbank:NP_625638.1,GeneID:1096776;Name=NP_625638.1;Note=2SCG61.35%2C possible transcriptional regulator%2C len: 343 aa%3B similar to many from proposed regulators from streptomyces e.g. TR:Q9ZBT5 (EMBL:AL034446) regulatory protein from Streptomyces coelicolor (327 aa) fasta scores%3B opt: 445%2C z-score: 498.6%2C E(): 2.7e-20%2C 31.7%25 identity in 325 aa overlap. Contains helix-turn-helix motif (residue 298-319);gbkey=CDS;gene=2SCG61.35;product=transcriptional regulator;protein_id=NP_625638.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	1431589	1431632	.	+	.	ID=id1691;Note=Score 50: 18/19 ( 94%25) matches%2C 0 gaps%2C 6 base loop;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1431662	1432225	.	-	.	ID=gene1340;Dbxref=GeneID:1096777;Name=2SCG61.36c;gbkey=Gene;gene=2SCG61.36c;gene_biotype=protein_coding;gene_synonym=2SCG61.36c;locus_tag=SCO1354
NC_003888.3	RefSeq	CDS	1431662	1432225	.	-	0	ID=cds1319;Parent=gene1340;Dbxref=Genbank:NP_625639.1,GeneID:1096777;Name=NP_625639.1;Note=2SCG61.36c%2C possible hypothetical protein%2C len: 187aa%3B contains a possible N-terminal signal sequence and Prosite match to PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;gbkey=CDS;gene=2SCG61.36c;product=hypothetical protein;protein_id=NP_625639.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1431734	1431763	.	-	.	ID=id1692;Dbxref=GeneID:1096777;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=2SCG61.36c
NC_003888.3	RefSeq	gene	1432286	1433899	.	-	.	ID=gene1341;Dbxref=GeneID:1096778;Name=2SCG61.37c;gbkey=Gene;gene=2SCG61.37c;gene_biotype=protein_coding;gene_synonym=2SCG61.37c;locus_tag=SCO1355
NC_003888.3	RefSeq	CDS	1432286	1433899	.	-	0	ID=cds1320;Parent=gene1341;Dbxref=Genbank:NP_625640.1,GeneID:1096778;Name=NP_625640.1;Note=2SCG61.37c%2C possible  serine protease%2C len: 537 aa%3B similar to many eg. SW:P08594 (AQL1_THEAQ) aqualysin I precursor (EC 3.4.21.-) from Thermus aquaticus (513 aa) fasta scores%3B opt: 1151%2C z-score: 1199.3%2C E(): 0%2C 45.6%25 identity in 428 aa overlap. Contains Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family and Prosite matches to PS00136%2C PS00137 and PS00138 Serine proteases%2C subtilase family%2C serine active sites. Also contains possible cleavable N-terminal signal sequence.;gbkey=CDS;gene=2SCG61.37c;product=serine protease;protein_id=NP_625640.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1432649	1433524	.	-	.	ID=id1693;Dbxref=GeneID:1096778;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 305.70%2C E-value 5.4e-88;gbkey=misc_feature;gene=2SCG61.37c
NC_003888.3	RefSeq	sequence_feature	1432796	1432828	.	-	.	ID=id1694;Dbxref=GeneID:1096778;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site;gbkey=misc_feature;gene=2SCG61.37c
NC_003888.3	RefSeq	sequence_feature	1433270	1433302	.	-	.	ID=id1695;Dbxref=GeneID:1096778;Note=PS00137 Serine proteases%2C subtilase family%2C histidine active site;gbkey=misc_feature;gene=2SCG61.37c
NC_003888.3	RefSeq	sequence_feature	1433378	1433413	.	-	.	ID=id1696;Dbxref=GeneID:1096778;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=2SCG61.37c
NC_003888.3	RefSeq	ribosome_entry_site	1433904	1433911	.	-	.	ID=id1697;gbkey=RBS
NC_003888.3	RefSeq	gene	1434218	1434715	.	+	.	ID=gene1342;Dbxref=GeneID:1096779;Name=2SCG61.38;gbkey=Gene;gene=2SCG61.38;gene_biotype=protein_coding;gene_synonym=2SCG61.38;locus_tag=SCO1356
NC_003888.3	RefSeq	CDS	1434218	1434715	.	+	0	ID=cds1321;Parent=gene1342;Dbxref=Genbank:NP_625641.1,GeneID:1096779;Name=NP_625641.1;Note=2SCG61.38%2C possible iron sulphur protein ( hypothetical protein)%2C len: 165 aa%3B similar to TR:Q9S237 (EMBL:AL109848)  iron sulphur protein from Streptomyces coelicolor (131 aa) fasta scores%3B opt: 444%2C z-score: 411.3%2C E(): 1.9e-15%2C 53.4%25 identity in 116 aa overlap. Contains Pfam match to entry PF00355 Rieske%2C Rieske [2Fe-2S] domain and Prosite match to PS00200 Rieske iron-sulfur protein signature 2. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCG61.38;product=iron sulfur protein;protein_id=NP_625641.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1434476	1434652	.	+	.	ID=id1698;Dbxref=GeneID:1096779;Note=Pfam match to entry PF00355 Rieske%2C Rieske [2Fe-2S] domain%2C score 49.10%2C E-value 9.9e-11;gbkey=misc_feature;gene=2SCG61.38
NC_003888.3	RefSeq	sequence_feature	1434593	1434610	.	+	.	ID=id1699;Dbxref=GeneID:1096779;Note=PS00200 Rieske iron-sulfur protein signature 2;gbkey=misc_feature;gene=2SCG61.38
NC_003888.3	RefSeq	ribosome_entry_site	1434710	1434714	.	+	.	ID=id1700;Dbxref=GeneID:1096779;gbkey=RBS;gene=2SCG61.38
NC_003888.3	RefSeq	gene	1434718	1435179	.	+	.	ID=gene1343;Dbxref=GeneID:1096780;Name=2SCG61.39;gbkey=Gene;gene=2SCG61.39;gene_biotype=protein_coding;gene_synonym=2SCG61.39;locus_tag=SCO1357
NC_003888.3	RefSeq	CDS	1434718	1435179	.	+	0	ID=cds1322;Parent=gene1343;Dbxref=Genbank:NP_625642.1,GeneID:1096780;Name=NP_625642.1;Note=2SCG61.39%2C hypothetical protein%2C len: 153 aa%3B similar to TR:O53240 (EMBL:AL021287) hypothetical protein from Mycobacterium tuberculosis (163 aa) fasta scores%3B opt: 266%2C z-score: 354.4%2C E(): 2.9e-12%2C 34.8%25 identity in 155 aa overlap.;gbkey=CDS;gene=2SCG61.39;product=hypothetical protein;protein_id=NP_625642.1;transl_table=11
NC_003888.3	RefSeq	gene	1435312	1436223	.	-	.	ID=gene1344;Dbxref=GeneID:1096781;Name=2SCG61.40c;gbkey=Gene;gene=2SCG61.40c;gene_biotype=protein_coding;gene_synonym=2SCG61.40c;locus_tag=SCO1358
NC_003888.3	RefSeq	CDS	1435312	1436223	.	-	0	ID=cds1323;Parent=gene1344;Dbxref=Genbank:NP_625643.1,GeneID:1096781;Name=NP_625643.1;Note=2SCG61.40c%2C possible LysR-family transcriptional regulator%2C len: 303 aa%3B similar to many e.g. SW:P11721 (OXYR_ECOLI) hydrogen peroxide-inducible genes activator from Escherichia coli (305 aa) fasta scores%3B opt: 359%2C z-score: 409.3%2C E(): 2.5e-15%2C 27.6%25 identity in 297 aa overlap and TR:Q9RDH0 (EMBL:AL136519) LysR-family transcriptional regulator from Streptomyces coelicolor (313 aa) fasta scores%3B opt: 897%2C z-score: 1010.0%2C E(): 0%2C 49.0%25 identity in 294 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and Prosite match to PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=CDS;gene=2SCG61.40c;product=LysR family transcriptional regulator;protein_id=NP_625643.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1435786	1436214	.	-	.	ID=id1701;Dbxref=GeneID:1096781;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 153.10%2C E-value 4.9e-42;gbkey=misc_feature;gene=2SCG61.40c
NC_003888.3	RefSeq	sequence_feature	1436080	1436172	.	-	.	ID=id1702;Dbxref=GeneID:1096781;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=2SCG61.40c
NC_003888.3	RefSeq	gene	1436298	1437296	.	+	.	ID=gene1345;Dbxref=GeneID:1096782;Name=2SCG61.41;gbkey=Gene;gene=2SCG61.41;gene_biotype=protein_coding;gene_synonym=2SCG61.41,SC10A9.01;locus_tag=SCO1359
NC_003888.3	RefSeq	CDS	1436298	1437296	.	+	0	ID=cds1324;Parent=gene1345;Dbxref=Genbank:NP_733531.1,GeneID:1096782;Name=NP_733531.1;Note=SC10A9.01%2C possible integral membrane protein (fragment)%2C len: >191 aa%3B similar to TR:Q9S248 (EMBL:AL096811) Streptomyces coelicolor possible integral membrane conserved hypothetical protein SCI30A.25%2C 324 aa%3B fasta scores: opt: 206 z-score: 220.5 E(): 7.8e-05%3B 31.3%25 identity in 176 aa overlap. Contains Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6 and possible hydrophobic membrane spanning regions~2SCG61.41%2C possible integral membrane protein%2C partial CDS%2C len: >181aa%3B weakly similar to other membrane proteins eg. TR:CAB88171 (EMBL:AL352972) integral membrane protein from Streptomyces coelicolor (326 aa) fasta scores%3B opt: 195%2C z-score: 241.4%2C E(): 5.7e-06%2C 29.1%25 identity in 158 aa overlap. Contains Pfam match to entry PF00892 DUF6%2C Integral membrane protein.;gbkey=CDS;gene=2SCG61.41;product=hypothetical protein;protein_id=NP_733531.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1436379	1436756	.	+	.	ID=id1703;Dbxref=GeneID:1096782;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 67.70%2C E-value 2.5e-16;gbkey=misc_feature;gene=2SCG61.41
NC_003888.3	RefSeq	sequence_feature	1436817	1437200	.	+	.	ID=id1704;Dbxref=GeneID:1096782;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 81.60%2C E-value 1.6e-20;gbkey=misc_feature;gene=2SCG61.41
NC_003888.3	RefSeq	sequence_feature	1437219	1437251	.	+	.	ID=id1705;Dbxref=GeneID:1096782;Note=region rich in alanine and proline amino acid residues;gbkey=misc_feature;gene=2SCG61.41
NC_003888.3	RefSeq	repeat_region	1437690	1437791	.	+	.	ID=id1706;Note=3x degenerate repeat: CCTC(G/A)GACGTAGCTCCGCGGCGGCCCCGACCCCG;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1437760	1439097	.	-	.	ID=gene1346;Dbxref=GeneID:1096783;Name=SC10A9.02c;gbkey=Gene;gene=SC10A9.02c;gene_biotype=protein_coding;gene_synonym=SC10A9.02c;locus_tag=SCO1360
NC_003888.3	RefSeq	CDS	1437760	1439097	.	-	0	ID=cds1325;Parent=gene1346;Dbxref=Genbank:NP_625644.1,GeneID:1096783;Name=NP_625644.1;Note=SC10A9.02c%2C probable gntR-family transcriptional regulator%2C len: 445 aa%3B similar to SW:PTSJ_SALTY (EMBL:U11243) Salmonella typhimurium transcriptional regulatory protein PtsJ%2C 430 aa%3B fasta scores: opt: 968 z-score: 1010.8 E(): 0%3B 40.4%25 identity in 433 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and possible helix-turn-helix motif at residues 35..56 (+4.36 SD);gbkey=CDS;gene=SC10A9.02c;product=GntR family transcriptional regulator;protein_id=NP_625644.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1438876	1439055	.	-	.	ID=id1707;Dbxref=GeneID:1096783;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 43.70%2C E-value 6.1e-12;gbkey=misc_feature;gene=SC10A9.02c
NC_003888.3	RefSeq	ribosome_entry_site	1439123	1439126	.	+	.	ID=id1708;gbkey=RBS
NC_003888.3	RefSeq	gene	1439133	1439819	.	+	.	ID=gene1347;Dbxref=GeneID:1096784;Name=SC10A9.03;gbkey=Gene;gene=SC10A9.03;gene_biotype=protein_coding;gene_synonym=SC10A9.03;locus_tag=SCO1361
NC_003888.3	RefSeq	CDS	1439133	1439819	.	+	0	ID=cds1326;Parent=gene1347;Dbxref=Genbank:NP_625645.1,GeneID:1096784;Name=NP_625645.1;Note=SC10A9.03%2C conserved hypothetical protein%2C len: 228 aa%3B similar to TR:Q9RW27 (EMBL:AE001938) Deinococcus radiodurans NimA-related protein DR0842%2C 195 aa%3B fasta scores: opt: 210 z-score: 256.7 E(): 7.4e-07%3B 30.5%25 identity in 197 aa overlap and to TR:Q98JR3 (EMBL:AP002998) Rhizobium loti (Mesorhizobium loti) MLL1820 protein%2C 251 aa%3B fasta scores: opt: 589 Z-score: 692.3 E(): 6.3e-31%3B 42.478%25 identity in 226 aa overlap;gbkey=CDS;gene=SC10A9.03;product=hypothetical protein;protein_id=NP_625645.1;transl_table=11
NC_003888.3	RefSeq	gene	1439866	1440840	.	-	.	ID=gene1348;Dbxref=GeneID:1096785;Name=SC10A9.04c;gbkey=Gene;gene=SC10A9.04c;gene_biotype=protein_coding;gene_synonym=SC10A9.04c;locus_tag=SCO1362
NC_003888.3	RefSeq	CDS	1439866	1440840	.	-	0	ID=cds1327;Parent=gene1348;Dbxref=Genbank:NP_625646.1,GeneID:1096785;Name=NP_625646.1;Note=SC10A9.04c%2C possible integral membrane protein%2C len: 324 aa%3B similar to SW:YWFM_BACSU (EMBL:X73124) Bacillus subtilis hypothetical 31.3 kDa protein in Pta 3' region Ywfm%2C 296 aa%3B fasta scores: opt: 267 z-score: 282.4 E(): 2.7e-08%3B 26.9%25 identity in 305 aa overlap. Contains 2x Pfam matches to entry PF00892 DUF6%2C Integral membrane protein DUF6. Also contains possible hydrophobic membrane spanning regions and a 4x degenerate repeat: LRP(R/A);gbkey=CDS;gene=SC10A9.04c;product=hypothetical protein;protein_id=NP_625646.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1439917	1440303	.	-	.	ID=id1709;Dbxref=GeneID:1096785;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 58.60%2C E-value 1.3e-13;gbkey=misc_feature;gene=SC10A9.04c
NC_003888.3	RefSeq	sequence_feature	1440361	1440777	.	-	.	ID=id1710;Dbxref=GeneID:1096785;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 46.30%2C E-value 6.7e-10;gbkey=misc_feature;gene=SC10A9.04c
NC_003888.3	RefSeq	repeat_region	1440607	1440654	.	-	.	ID=id1711;Dbxref=GeneID:1096785;Note=4x degenerate repeat translated in SC10A9.04c;gbkey=repeat_region;gene=SC10A9.04c
NC_003888.3	RefSeq	ribosome_entry_site	1440848	1440851	.	-	.	ID=id1712;gbkey=RBS
NC_003888.3	RefSeq	gene	1441026	1442030	.	-	.	ID=gene1349;Dbxref=GeneID:1096786;Name=SC10A9.05c;gbkey=Gene;gene=SC10A9.05c;gene_biotype=protein_coding;gene_synonym=SC10A9.05c;locus_tag=SCO1363
NC_003888.3	RefSeq	CDS	1441026	1442030	.	-	0	ID=cds1328;Parent=gene1349;Dbxref=Genbank:NP_625647.1,GeneID:1096786;Name=NP_625647.1;Note=SC10A9.05c%2C possible integral membrane protein%2C len: 334 aa%3B low similarity to SW:YCBK_BACSU (EMBL:D30808) Bacillus subtilis hypothetical 34.0 kDa protein in GltP-Pcp intergenic region YcbK%2C 312 aa%3B fasta scores: opt: 200 z-score: 236.4 E(): 1e-05%3B 22.6%25 identity in 292 aa overlap. Contains 2x Pfam matches to entry PF00892 DUF6%2C Integral membrane protein DUF6. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10A9.05c;product=hypothetical protein;protein_id=NP_625647.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1441110	1441526	.	-	.	ID=id1713;Dbxref=GeneID:1096786;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 64.40%2C E-value 2.5e-15;gbkey=misc_feature;gene=SC10A9.05c
NC_003888.3	RefSeq	sequence_feature	1441584	1441952	.	-	.	ID=id1714;Dbxref=GeneID:1096786;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 61.10%2C E-value 2.3e-14;gbkey=misc_feature;gene=SC10A9.05c
NC_003888.3	RefSeq	repeat_region	1442103	1442188	.	+	.	ID=id1715;Note=4x degenerate repeat: (G/A)(G/C)(a/G)CGCGGGAGGGACGA;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1442209	1442748	.	-	.	ID=gene1350;Dbxref=GeneID:1096787;Name=SC10A9.06c;gbkey=Gene;gene=SC10A9.06c;gene_biotype=protein_coding;gene_synonym=SC10A9.06c;locus_tag=SCO1364
NC_003888.3	RefSeq	CDS	1442209	1442748	.	-	0	ID=cds1329;Parent=gene1350;Dbxref=Genbank:NP_625648.1,GeneID:1096787;Name=NP_625648.1;Note=SC10A9.06c%2C unknown%2C len: 179 aa;gbkey=CDS;gene=SC10A9.06c;product=hypothetical protein;protein_id=NP_625648.1;transl_table=11
NC_003888.3	RefSeq	gene	1442967	1443134	.	+	.	ID=gene1351;Dbxref=GeneID:1096788;Name=SC10A9.07;gbkey=Gene;gene=SC10A9.07;gene_biotype=protein_coding;gene_synonym=SC10A9.07;locus_tag=SCO1365
NC_003888.3	RefSeq	CDS	1442967	1443134	.	+	0	ID=cds1330;Parent=gene1351;Dbxref=Genbank:NP_625649.1,GeneID:1096788;Name=NP_625649.1;Note=SC10A9.07%2C unknown%2C len: 55 aa;gbkey=CDS;gene=SC10A9.07;product=hypothetical protein;protein_id=NP_625649.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	1443188	1443226	.	-	.	ID=id1716;Note=possible stem loop. Score 51: 17/17 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1443255	1443908	.	-	.	ID=gene1352;Dbxref=GeneID:1096789;Name=SC10A9.08c;gbkey=Gene;gene=SC10A9.08c;gene_biotype=protein_coding;gene_synonym=SC10A9.08c;locus_tag=SCO1366
NC_003888.3	RefSeq	CDS	1443255	1443908	.	-	0	ID=cds1331;Parent=gene1352;Dbxref=Genbank:NP_625650.1,GeneID:1096789;Name=NP_625650.1;Note=SC10A9.08c%2C hypothetical protein%2C len: 219 aa%3B similar to TR:CAC05955 (EMBL:AL391763) Streptomyces coelicolor hypothetical 40.1 kDa protein 2SC7G11.14c%2C 360 aa%3B fasta scores: opt: 237 z-score: 225.1 E(): 4.3e-05%3B 34.5%25 identity in 145 aa overlap and to TR:Q9CB82 (EMBL:AL583925) Mycobacterium leprae hypothetical protein ML2313%2C 200 aa%3B fasta scores: opt: 526 Z-score: 466.8 E(): 2.3e-18%3B 49.171%25 identity in 181 aa overlap. Contains C-terminal region rich in glycine%2C arginine and proline amino acid residues;gbkey=CDS;gene=SC10A9.08c;product=hypothetical protein;protein_id=NP_625650.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1443681	1443896	.	-	.	ID=id1717;Dbxref=GeneID:1096789;Note=region rich in glycine%2C proline and arginine amino acid residues;gbkey=misc_feature;gene=SC10A9.08c
NC_003888.3	RefSeq	gene	1443901	1444656	.	-	.	ID=gene1353;Dbxref=GeneID:1096790;Name=SC10A9.09c;gbkey=Gene;gene=SC10A9.09c;gene_biotype=protein_coding;gene_synonym=SC10A9.09c;locus_tag=SCO1367
NC_003888.3	RefSeq	CDS	1443901	1444656	.	-	0	ID=cds1332;Parent=gene1353;Dbxref=Genbank:NP_625651.1,GeneID:1096790;Name=NP_625651.1;Note=SC10A9.09c%2C probable ABC transport system ATP-binding protein%2C len: 251 aa%3B similar to SW:LOLD_ECOLI (EMBL:AE000212) Escherichia coli lipoprotein releasing system ATP-binding protein LolD%2C 233 aa%3B fasta scores: opt: 530 z-score: 576.0 E(): 1.2e-24%3B 40.8%25 identity in 218 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC10A9.09c;product=ABC transporter ATP-binding protein;protein_id=NP_625651.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1443917	1443920	.	-	.	ID=id1718;Dbxref=GeneID:1096790;gbkey=RBS;gene=SC10A9.09c
NC_003888.3	RefSeq	sequence_feature	1444003	1444563	.	-	.	ID=id1719;Dbxref=GeneID:1096790;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 190.10%2C E-value 3.4e-53;gbkey=misc_feature;gene=SC10A9.09c
NC_003888.3	RefSeq	sequence_feature	1444186	1444230	.	-	.	ID=id1720;Dbxref=GeneID:1096790;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC10A9.09c
NC_003888.3	RefSeq	sequence_feature	1444519	1444542	.	-	.	ID=id1721;Dbxref=GeneID:1096790;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC10A9.09c
NC_003888.3	RefSeq	gene	1444653	1445792	.	-	.	ID=gene1354;Dbxref=GeneID:1096791;Name=SC10A9.10c;gbkey=Gene;gene=SC10A9.10c;gene_biotype=protein_coding;gene_synonym=SC10A9.10c;locus_tag=SCO1368
NC_003888.3	RefSeq	CDS	1444653	1445792	.	-	0	ID=cds1333;Parent=gene1354;Dbxref=Genbank:NP_625652.1,GeneID:1096791;Name=NP_625652.1;Note=SC10A9.10c%2C possible ABC transport system transmembrane protein%2C len: 379 aa%3B low similarity to TR:O53617 (EMBL:AL021428) Mycobacterium tuberculosis ABC-transporter transmembrane subunit%2C 349 aa%3B fasta scores: opt: 175 z-score: 176.6 E(): 0.022%3B 24.3%25 identity in 387 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10A9.10c;product=ABC transporter;protein_id=NP_625652.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1444663	1444666	.	-	.	ID=id1722;Dbxref=GeneID:1096791;gbkey=RBS;gene=SC10A9.10c
NC_003888.3	RefSeq	ribosome_entry_site	1445795	1445798	.	-	.	ID=id1723;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1445958	1445961	.	+	.	ID=id1724;gbkey=RBS
NC_003888.3	RefSeq	gene	1445966	1447180	.	+	.	ID=gene1355;Dbxref=GeneID:1096792;Name=SC10A9.11;gbkey=Gene;gene=SC10A9.11;gene_biotype=protein_coding;gene_synonym=SC10A9.11;locus_tag=SCO1369
NC_003888.3	RefSeq	CDS	1445966	1447180	.	+	0	ID=cds1334;Parent=gene1355;Dbxref=Genbank:NP_625653.1,GeneID:1096792;Name=NP_625653.1;Note=SC10A9.11%2C probable two component system histidine kinase%2C len: 404 aa%3B highly similar to TR:Q9RIM1 (EMBL:Y14336) Streptomyces reticuli histidine autokinase SenS%2C 398 aa%3B fasta scores: opt: 911 z-score: 966.5 E(): 0%3B 46.0%25 identity in 404 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase and N-terminal region possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10A9.11;product=two component system histidine kinase;protein_id=NP_625653.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1446569	1447144	.	+	.	ID=id1725;Dbxref=GeneID:1096792;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score -12.40%2C E-value 0.00021;gbkey=misc_feature;gene=SC10A9.11
NC_003888.3	RefSeq	ribosome_entry_site	1447166	1447169	.	+	.	ID=id1726;Dbxref=GeneID:1096792;gbkey=RBS;gene=SC10A9.11
NC_003888.3	RefSeq	gene	1447177	1447812	.	+	.	ID=gene1356;Dbxref=GeneID:1096793;Name=SC10A9.12;gbkey=Gene;gene=SC10A9.12;gene_biotype=protein_coding;gene_synonym=SC10A9.12;locus_tag=SCO1370
NC_003888.3	RefSeq	CDS	1447177	1447812	.	+	0	ID=cds1335;Parent=gene1356;Dbxref=Genbank:NP_625654.1,GeneID:1096793;Name=NP_625654.1;Note=SC10A9.12%2C probable two component system DNA binding response regulator%2C len: 211 aa%3B similar to SW:NARP_ECOLI (EMBL:L11273) Escherichia coli nitrate/nitrite response regulator protein NarP%2C 215 aa%3B fasta scores: opt: 467 z-score: 529.1 E(): 5e-22%3B 41.1%25 identity in 202 aa overlap and to TR:Q9RIM0 (EMBL:Y14336) Streptomyces reticuli response regulatory protein SenR%2C 217 aa%3B fasta scores: opt: 699 z-score: 785.2 E(): 0%3B 56.5%25 identity in 200 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains possible helix-turn-helix motif at residues 164..185 (+4.15 SD);gbkey=CDS;gene=SC10A9.12;product=two component system DNA binding response regulator;protein_id=NP_625654.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1447192	1447536	.	+	.	ID=id1727;Dbxref=GeneID:1096793;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 112.10%2C E-value 1.1e-29;gbkey=misc_feature;gene=SC10A9.12
NC_003888.3	RefSeq	sequence_feature	1447612	1447809	.	+	.	ID=id1728;Dbxref=GeneID:1096793;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 82.80%2C E-value 7.1e-21;gbkey=misc_feature;gene=SC10A9.12
NC_003888.3	RefSeq	sequence_feature	1447663	1447746	.	+	.	ID=id1729;Dbxref=GeneID:1096793;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC10A9.12
NC_003888.3	RefSeq	gene	1447950	1448759	.	+	.	ID=gene1357;Dbxref=GeneID:1096794;Name=SC10A9.13;gbkey=Gene;gene=SC10A9.13;gene_biotype=protein_coding;gene_synonym=SC10A9.13;locus_tag=SCO1371
NC_003888.3	RefSeq	CDS	1447950	1448759	.	+	0	ID=cds1336;Parent=gene1357;Dbxref=Genbank:NP_625655.1,GeneID:1096794;Name=NP_625655.1;Note=SC10A9.13%2C probable oxidoreductase%2C len: 278 aa%3B similar to SW:PHZF_PSEFL (EMBL:L48616) Pseudomonas fluorescens phenazine biosynthesis protein PhzF%2C 278 aa%3B fasta scores: opt: 279 z-score: 322.8 E(): 1.5e-10%3B 30.9%25 identity in 285 aa overlap;gbkey=CDS;gene=SC10A9.13;product=oxidoreductase;protein_id=NP_625655.1;transl_table=11
NC_003888.3	RefSeq	gene	1448786	1449613	.	-	.	ID=gene1358;Dbxref=GeneID:1096795;Name=SC10A9.14c;gbkey=Gene;gene=SC10A9.14c;gene_biotype=protein_coding;gene_synonym=SC10A9.14c;locus_tag=SCO1372
NC_003888.3	RefSeq	CDS	1448786	1449613	.	-	0	ID=cds1337;Parent=gene1358;Dbxref=Genbank:NP_625656.1,GeneID:1096795;Name=NP_625656.1;Note=SC10A9.14c%2C possible integral membrane protein%2C len: 275 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10A9.14c;product=hypothetical protein;protein_id=NP_625656.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1449623	1449627	.	-	.	ID=id1730;gbkey=RBS
NC_003888.3	RefSeq	gene	1449695	1451212	.	-	.	ID=gene1359;Dbxref=GeneID:1096796;Name=SC10A9.15c;gbkey=Gene;gene=SC10A9.15c;gene_biotype=protein_coding;gene_synonym=SC10A9.15c;locus_tag=SCO1373
NC_003888.3	RefSeq	CDS	1449695	1451212	.	-	0	ID=cds1338;Parent=gene1359;Dbxref=Genbank:NP_625657.1,GeneID:1096796;Name=NP_625657.1;Note=SC10A9.15c%2C conserved hypothetical protein%2C len: 505 aa%3B similar to TR:O69666 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical 56.9 kDa protein MTV025.046%2C 509 aa%3B fasta scores: opt: 1720 z-score: 2047.1 E(): 0%3B 53.6%25 identity in 494 aa overlap;gbkey=CDS;gene=SC10A9.15c;product=hypothetical protein;protein_id=NP_625657.1;transl_table=11
NC_003888.3	RefSeq	gene	1451745	1452356	.	+	.	ID=gene1360;Dbxref=GeneID:1096797;Name=SC10A9.16;gbkey=Gene;gene=SC10A9.16;gene_biotype=protein_coding;gene_synonym=SC10A9.16;locus_tag=SCO1374
NC_003888.3	RefSeq	CDS	1451745	1452356	.	+	0	ID=cds1339;Parent=gene1360;Dbxref=Genbank:NP_625658.1,GeneID:1096797;Name=NP_625658.1;Note=SC10A9.16%2C hypothetical protein%2C len: 203 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10A9.16;product=hypothetical protein;protein_id=NP_625658.1;transl_table=11
NC_003888.3	RefSeq	gene	1452656	1452859	.	+	.	ID=gene1361;Dbxref=GeneID:1096798;Name=SC10A9.17;gbkey=Gene;gene=SC10A9.17;gene_biotype=protein_coding;gene_synonym=SC10A9.17;locus_tag=SCO1375
NC_003888.3	RefSeq	CDS	1452656	1452859	.	+	0	ID=cds1340;Parent=gene1361;Dbxref=Genbank:NP_625659.1,GeneID:1096798;Name=NP_625659.1;Note=SC10A9.17%2C unknown%2C len: 67 aa: similar to TR:Q9AD54 (EMBL:AL590463) SCP1.96 from Streptomyces coelicolor plasmid SCP1.;gbkey=CDS;gene=SC10A9.17;product=hypothetical protein;protein_id=NP_625659.1;transl_table=11
NC_003888.3	RefSeq	gene	1453090	1454160	.	+	.	ID=gene1362;Dbxref=GeneID:1096799;Name=SC10A9.18;gbkey=Gene;gene=SC10A9.18;gene_biotype=protein_coding;gene_synonym=SC10A9.18;locus_tag=SCO1376
NC_003888.3	RefSeq	CDS	1453090	1454160	.	+	0	ID=cds1341;Parent=gene1362;Dbxref=Genbank:NP_625660.1,GeneID:1096799;Name=NP_625660.1;Note=SC10A9.18%2C probable lacI-family transcriptional regulatory protein%2C len: 356 aa%3B similar to SW:CELR_THEFU (EMBL:AF086819) Thermomonospora fusca transcription regulator CelR%2C 340 aa%3B fasta scores: opt: 681 z-score: 700.7 E(): 1.4e-31%3B 40.7%25 identity in 339 aa overlap and to TR:O86795 (EMBL:AL031317) Streptomyces coelicolor probable transcriptional regulator SC6G4.32%2C 355 aa%3B fasta scores: opt: 1196 z-score: 1059.6 E(): 0%3B 56.7%25 identity in 344 aa overlap. Contains Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins%2C lacI family signature. Also contains a possible helix-turn-helix motif at residues 12..39 (+7.22 SD);gbkey=CDS;gene=SC10A9.18;product=LacI family transcriptional regulator;protein_id=NP_625660.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1453135	1453218	.	+	.	ID=id1731;Dbxref=GeneID:1096799;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 42.80%2C E-value 1.1e-10;gbkey=misc_feature;gene=SC10A9.18
NC_003888.3	RefSeq	sequence_feature	1453147	1453203	.	+	.	ID=id1732;Dbxref=GeneID:1096799;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SC10A9.18
NC_003888.3	RefSeq	sequence_feature	1453300	1454028	.	+	.	ID=id1733;Dbxref=GeneID:1096799;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 159.70%2C E-value 5e-44;gbkey=misc_feature;gene=SC10A9.18
NC_003888.3	RefSeq	gene	1454293	1454712	.	+	.	ID=gene1363;Dbxref=GeneID:1096800;Name=SC10A9.19;gbkey=Gene;gene=SC10A9.19;gene_biotype=protein_coding;gene_synonym=SC10A9.19;locus_tag=SCO1377
NC_003888.3	RefSeq	CDS	1454293	1454712	.	+	0	ID=cds1342;Parent=gene1363;Dbxref=Genbank:NP_625661.1,GeneID:1096800;Name=NP_625661.1;Note=SC10A9.19%2C possible molibdenum binding protein%2C len: 139 aa%3B similar to C-terminal region of SW:MOPA_RHOCA (EMBL:L06254) Rhodobacter capsulatus molybdenum-pterin binding protein MopA%2C 265 aa%3B fasta scores: opt: 280 z-score: 319.9 E(): 2.2e-10%3B 41.7%25 identity in 139 aa overlap;gbkey=CDS;gene=SC10A9.19;product=molibdenum binding protein;protein_id=NP_625661.1;transl_table=11
NC_003888.3	RefSeq	gene	1454780	1457665	.	-	.	ID=gene1364;Dbxref=GeneID:1096801;Name=SC10A9.20c;gbkey=Gene;gene=SC10A9.20c;gene_biotype=protein_coding;gene_synonym=SC10A9.20c;locus_tag=SCO1378
NC_003888.3	RefSeq	CDS	1454780	1457665	.	-	0	ID=cds1343;Parent=gene1364;Dbxref=Genbank:NP_625662.1,GeneID:1096801;Name=NP_625662.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;gene=SC10A9.20c;product=glycine dehydrogenase;protein_id=NP_625662.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1456325	1457611	.	-	.	ID=id1734;Dbxref=GeneID:1096801;Note=Pfam match to entry PF02347 GDC-P%2C %2C score 850.10%2C E-value 7.4e-252;gbkey=misc_feature;gene=SC10A9.20c
NC_003888.3	RefSeq	gene	1458078	1458473	.	+	.	ID=gene1365;Dbxref=GeneID:1096802;Name=SC10A9.21;gbkey=Gene;gene=SC10A9.21;gene_biotype=protein_coding;gene_synonym=SC10A9.21;locus_tag=SCO1379
NC_003888.3	RefSeq	CDS	1458078	1458473	.	+	0	ID=cds1344;Parent=gene1365;Dbxref=Genbank:NP_625663.1,GeneID:1096802;Name=NP_625663.1;Note=SC10A9.21%2C hypothetical protein%2C len: 131 aa%3B similar to TR:Q9RJP4 (EMBL:AL132991) Streptomyces coelicolor hypothetical 14.5 kDa protein SCF55.21c%2C 131 aa%3B fasta scores: opt: 195 z-score: 246.8 E(): 2.7e-06%3B 33.3%25 identity in 96 aa overlap;gbkey=CDS;gene=SC10A9.21;product=hypothetical protein;protein_id=NP_625663.1;transl_table=11
NC_003888.3	RefSeq	gene	1458383	1459822	.	-	.	ID=gene1366;Dbxref=GeneID:1096803;Name=SC10A9.22c;gbkey=Gene;gene=SC10A9.22c;gene_biotype=protein_coding;gene_synonym=SC10A9.22c;locus_tag=SCO1380
NC_003888.3	RefSeq	CDS	1458383	1459822	.	-	0	ID=cds1345;Parent=gene1366;Dbxref=Genbank:NP_625664.2,GeneID:1096803;Name=NP_625664.2;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;gene=SC10A9.22c;product=DNA polymerase IV;protein_id=NP_625664.2;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1458785	1459789	.	-	.	ID=id1735;Dbxref=GeneID:1096803;Note=Pfam match to entry PF00817 IMS%2C impB/mucB/samB family%2C score 303.30%2C E-value 2.9e-87;gbkey=misc_feature;gene=SC10A9.22c
NC_003888.3	RefSeq	gene	1459887	1460573	.	-	.	ID=gene1367;Dbxref=GeneID:1096804;Name=SC10A9.23c;gbkey=Gene;gene=SC10A9.23c;gene_biotype=protein_coding;gene_synonym=SC10A9.23c,SC1A8A.01c;locus_tag=SCO1381
NC_003888.3	RefSeq	CDS	1459887	1460573	.	-	0	ID=cds1346;Parent=gene1367;Dbxref=Genbank:NP_733532.1,GeneID:1096804;Name=NP_733532.1;Note=SC1A8A.01c%2C partial CDS%2C hypothetical protein%2C len: >183aa%3B similar to SW:Q50603 (Y0DD_MYCTU) hypothetical protein from Mycobacterium tuberculosis (225 aa) fasta scores%3B opt: 641%2C z-score: 633.8%2C E(): 7.1e-28%2C 64.7%25 identity in 150 aa overlap. Note possible alternative translational start sites downstream.~SC10A9.23c%2C conserved hypothetical protein (fragment)%2C len: >78 aa%3B similar to SW:YI30_MYCTU (EMBL:Z78020) Mycobacterium tuberculosis hypothetical 24.0 kDa protein MTCY1A11.13c%2C 225 aa%3B fasta scores: opt: 269 z-score: 377.2 E(): 1.4e-13%3B 56.0%25 identity in 75 aa overlap;gbkey=CDS;gene=SC10A9.23c;product=hypothetical protein;protein_id=NP_733532.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1460578	1460585	.	-	.	ID=id1736;gbkey=RBS
NC_003888.3	RefSeq	gene	1460736	1461209	.	-	.	ID=gene1368;Dbxref=GeneID:1096805;Name=SC1A8A.02c;gbkey=Gene;gene=SC1A8A.02c;gene_biotype=protein_coding;gene_synonym=SC1A8A.02c;locus_tag=SCO1382
NC_003888.3	RefSeq	CDS	1460736	1461209	.	-	0	ID=cds1347;Parent=gene1368;Dbxref=Genbank:NP_625665.1,GeneID:1096805;Name=NP_625665.1;Note=SC1A8A.02c%2C conserved hypothetical protein%2C len: 157aa%3B similar to many eg. SW:Q50604 (Y0DE_MYCTU) hypothetical protein from Mycobacterium tuberculosis (164 aa) fasta scores%3B opt: 592%2C z-score: 709.0%2C E(): 4.6e-32%2C 60.2%25 identity in 161 aa overlap;gbkey=CDS;gene=SC1A8A.02c;product=hypothetical protein;protein_id=NP_625665.1;transl_table=11
NC_003888.3	RefSeq	gene	1461293	1462033	.	-	.	ID=gene1369;Dbxref=GeneID:1096806;Name=SC1A8A.03c;gbkey=Gene;gene=SC1A8A.03c;gene_biotype=protein_coding;gene_synonym=SC1A8A.03c;locus_tag=SCO1383
NC_003888.3	RefSeq	CDS	1461293	1462033	.	-	0	ID=cds1348;Parent=gene1369;Dbxref=Genbank:NP_625666.1,GeneID:1096806;Name=NP_625666.1;Note=SC1A8A.03c%2C hypothetical protein%2C len: 246aa%3B similar to SW:Q50605 (Y0DF_MYCTU) hypothetical protein from Mycobacterium tuberculosis (247 aa) fasta scores%3B opt: 359%2C z-score: 418.8%2C E(): 6.8e-16%2C 42.2%25 identity in 230 aa overlap.;gbkey=CDS;gene=SC1A8A.03c;product=hypothetical protein;protein_id=NP_625666.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1462036	1462041	.	-	.	ID=id1737;gbkey=RBS
NC_003888.3	RefSeq	gene	1462078	1462881	.	-	.	ID=gene1370;Dbxref=GeneID:1096807;Name=SC1A8A.04c;gbkey=Gene;gene=SC1A8A.04c;gene_biotype=protein_coding;gene_synonym=SC1A8A.04c;locus_tag=SCO1384
NC_003888.3	RefSeq	CDS	1462078	1462881	.	-	0	ID=cds1349;Parent=gene1370;Dbxref=Genbank:NP_625667.1,GeneID:1096807;Name=NP_625667.1;Note=SC1A8A.04c%2C hypothetical protein%2C len: 267aa%3B similar to but longer than SW:Q50606 (Y0DG_MYCTU) hypothetical protein from Mycobacterium tuberculosis (162 aa) fasta scores%3B opt: 503%2C z-score: 488.2%2C E(): 9.2e-20%2C 56.0%25 identity in 141 aa overlap. Contains Pfam match to entry PF00498 FHA%2C FHA domain;gbkey=CDS;gene=SC1A8A.04c;product=hypothetical protein;protein_id=NP_625667.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1462120	1462314	.	-	.	ID=id1738;Dbxref=GeneID:1096807;Note=Pfam match to entry PF00498 FHA%2C FHA domain%2C score 74.30%2C E-value 2.5e-18;gbkey=misc_feature;gene=SC1A8A.04c
NC_003888.3	RefSeq	gene	1463072	1463926	.	-	.	ID=gene1371;Dbxref=GeneID:1096808;Name=SC1A8A.05c;gbkey=Gene;gene=SC1A8A.05c;gene_biotype=protein_coding;gene_synonym=SC1A8A.05c;locus_tag=SCO1385
NC_003888.3	RefSeq	CDS	1463072	1463926	.	-	0	ID=cds1350;Parent=gene1371;Dbxref=Genbank:NP_625668.1,GeneID:1096808;Name=NP_625668.1;Note=SC1A8A.05c%2C membrane protein%2C len: 284 aa%3B similar to SW:Q50608 (Y0DI_MYCTU) hypothetical protein from Mycobacterium tuberculosis (292 aa) fasta scores%3B opt: 421%2C z-score: 440.5%2C E(): 4.2e-17%2C 33.6%25 identity in 277 aa overlap. Contains potential coiled-coil region 106-140 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC1A8A.05c;product=hypothetical protein;protein_id=NP_625668.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1463930	1463933	.	-	.	ID=id1739;gbkey=RBS
NC_003888.3	RefSeq	gene	1463932	1464264	.	-	.	ID=gene1372;Dbxref=GeneID:1096809;Name=SC1A8A.06c;gbkey=Gene;gene=SC1A8A.06c;gene_biotype=protein_coding;gene_synonym=SC1A8A.06c;locus_tag=SCO1386
NC_003888.3	RefSeq	CDS	1463932	1464264	.	-	0	ID=cds1351;Parent=gene1372;Dbxref=Genbank:NP_625669.1,GeneID:1096809;Name=NP_625669.1;Note=SC1A8A.06c%2C possible integral membrane protein%2C len: 110 aa%3B similar to SW:Q50609 (Y0DJ_MYCTU) hypothetical protein from Mycobacterium tuberculosis (121 aa) fasta scores%3B opt: 478%2C z-score: 600.3%2C E(): 5.2e-26%2C 67.3%25 identity in 110 aa overlap. Contains possible hydrophobic membrane spannig regions;gbkey=CDS;gene=SC1A8A.06c;product=hypothetical protein;protein_id=NP_625669.1;transl_table=11
NC_003888.3	RefSeq	gene	1464261	1465166	.	-	.	ID=gene1373;Dbxref=GeneID:1096810;Name=SC1A8A.07c;gbkey=Gene;gene=SC1A8A.07c;gene_biotype=protein_coding;gene_synonym=SC1A8A.07c;locus_tag=SCO1387
NC_003888.3	RefSeq	CDS	1464261	1465166	.	-	0	ID=cds1352;Parent=gene1373;Dbxref=Genbank:NP_625670.1,GeneID:1096810;Name=NP_625670.1;Note=SC1A8A.07c%2C possible membrane associated protein%2C len: 110 aa%3B similar to SW:Q50610 (Y0DK_MYCTU) hypothetical protein from Mycobacterium tuberculosis (307 aa) fasta scores%3B opt: 499%2C z-score: 537.1%2C E(): 1.7e-22%2C 38.3%25 identity in 282 aa overlap. Contains possible membrane-spanning hydrophobic region 60-75 aa and potential coiled-coil region 100-122 aa;gbkey=CDS;gene=SC1A8A.07c;product=membrane associated protein;protein_id=NP_625670.1;transl_table=11
NC_003888.3	RefSeq	gene	1465266	1467761	.	-	.	ID=gene1374;Dbxref=GeneID:1096811;Name=SC1A8A.08c;gbkey=Gene;gene=SC1A8A.08c;gene_biotype=protein_coding;gene_synonym=SC1A8A.08c;locus_tag=SCO1388
NC_003888.3	RefSeq	CDS	1465266	1467761	.	-	0	ID=cds1353;Parent=gene1374;Dbxref=Genbank:NP_625671.1,GeneID:1096811;Name=NP_625671.1;Note=SC1A8A.08c%2C possible mannose-1-phosphate guanyltransferase%2C len: 831aa%3B similar to many eg. TR:P74589 (EMBL:D90916) mannose-1-phosphate guanyltransferase from Synechocystis sp. (strain PCC 6803) (843 aa) fasta scores%3B opt: 2184%2C z-score: 2364.6%2C E(): 0%2C 39.7%25 identity in 817 aa overlap and SW:P41940 (MPG1_YEAST) mannose-1-phosphate guanyltransferase from Saccharomyces cerevisiae (Baker's yeast) (361 aa). Contains Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C four Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats) and Pfam match to entry PF00408 PGM_PMM%2C Phosphoglucomutase/phosphomannomutase.;gbkey=CDS;gene=SC1A8A.08c;product=mannose-1-phosphate guanyltransferase;protein_id=NP_625671.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1465314	1466621	.	-	.	ID=id1740;Dbxref=GeneID:1096811;Note=Pfam match to entry PF00408 PGM_PMM%2C Phosphoglucomutase/phosphomannomutase%2C score -50.00%2C E-value 4.3e-08;gbkey=misc_feature;gene=SC1A8A.08c
NC_003888.3	RefSeq	sequence_feature	1466688	1466744	.	-	.	ID=id1741;Dbxref=GeneID:1096811;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 7.50%2C E-value 2.6;gbkey=misc_feature;gene=SC1A8A.08c
NC_003888.3	RefSeq	sequence_feature	1466778	1466849	.	-	.	ID=id1742;Dbxref=GeneID:1096811;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 0.10%2C E-value 3.2e+02;gbkey=misc_feature;gene=SC1A8A.08c
NC_003888.3	RefSeq	sequence_feature	1466880	1466957	.	-	.	ID=id1743;Dbxref=GeneID:1096811;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.20%2C E-value 0.23;gbkey=misc_feature;gene=SC1A8A.08c
NC_003888.3	RefSeq	sequence_feature	1466982	1467026	.	-	.	ID=id1744;Dbxref=GeneID:1096811;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 1.70%2C E-value 1.1e+02;gbkey=misc_feature;gene=SC1A8A.08c
NC_003888.3	RefSeq	sequence_feature	1467057	1467758	.	-	.	ID=id1745;Dbxref=GeneID:1096811;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C score 233.60%2C E-value 2.8e-66;gbkey=misc_feature;gene=SC1A8A.08c
NC_003888.3	RefSeq	ribosome_entry_site	1467773	1467778	.	-	.	ID=id1746;gbkey=RBS
NC_003888.3	RefSeq	gene	1467874	1468521	.	-	.	ID=gene1375;Dbxref=GeneID:1096812;Name=SC1A8A.09c;gbkey=Gene;gene=SC1A8A.09c;gene_biotype=protein_coding;gene_synonym=SC1A8A.09c;locus_tag=SCO1389
NC_003888.3	RefSeq	CDS	1467874	1468521	.	-	0	ID=cds1354;Parent=gene1375;Dbxref=Genbank:NP_625672.1,GeneID:1096812;Name=NP_625672.1;Note=SC1A8A.09c%2C possible CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase%2C len: 206 aa%3B similar to many eg. SW:Q50611 (PGSA_MYCTU)  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase from Mycobacterium tuberculosis (209 aa) fasta scores%3B opt: 504%2C z-score: 637.7%2C E(): 4.3e-28%2C 43.5%25 identity in 193 aa overlap and SW:P06978 (PGSA_ECOLI ) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase from Escherichia coli (181 aa) fasta scores%3B opt: 232%2C z-score: 299.4 E(): 3e-09%2C 29.3%25 identity in 174 aa overlap. Contains Pfam match to entry PF01066 CDP-OH_P_transf%2C CDP-alcohol phosphatidyltransferase and Prosite match to PS00379 CDP-alcohol phosphatidyltransferases signature. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC1A8A.09c;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=NP_625672.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1467883	1468335	.	-	.	ID=id1747;Dbxref=GeneID:1096812;Note=Pfam match to entry PF01066 CDP-OH_P_transf%2C CDP-alcohol phosphatidyltransferase%2C score 105.20%2C E-value 1.2e-27;gbkey=misc_feature;gene=SC1A8A.09c
NC_003888.3	RefSeq	sequence_feature	1468228	1468296	.	-	.	ID=id1748;Dbxref=GeneID:1096812;Note=PS00379 CDP-alcohol phosphatidyltransferases signature;gbkey=misc_feature;gene=SC1A8A.09c
NC_003888.3	RefSeq	gene	1468591	1468710	.	-	.	ID=gene1376;Dbxref=GeneID:1096813;Name=rrnC;gbkey=Gene;gene=rrnC;gene_biotype=rRNA;locus_tag=SCOr01
NC_003888.3	RefSeq	rRNA	1468591	1468710	.	-	.	ID=rna0;Parent=gene1376;Dbxref=GeneID:1096813;Note=5S ribosomal RNA. Coordinates determined by comparison with Streptomyces griseus 16S ribosomal RNA (EMBL:M76388).;gbkey=rRNA;gene=rrnC;product=5S ribosomal RNA
NC_003888.3	RefSeq	exon	1468591	1468710	.	-	.	ID=id1749;Parent=rna0;Dbxref=GeneID:1096813;Note=5S ribosomal RNA. Coordinates determined by comparison with Streptomyces griseus 16S ribosomal RNA (EMBL:M76388).;gbkey=rRNA;gene=rrnC;product=5S ribosomal RNA
NC_003888.3	RefSeq	gene	1468795	1471916	.	-	.	ID=gene1377;Dbxref=GeneID:1096814;Name=rrnC;gbkey=Gene;gene=rrnC;gene_biotype=rRNA;locus_tag=SCOr02
NC_003888.3	RefSeq	rRNA	1468795	1471916	.	-	.	ID=rna1;Parent=gene1377;Dbxref=GeneID:1096814;Note=23S ribosomal RNA. Coordinates determined by comparison with Streptomyces griseus 16S ribosomal RNA (EMBL:M76388).;gbkey=rRNA;gene=rrnC;product=23S ribosomal RNA
NC_003888.3	RefSeq	exon	1468795	1471916	.	-	.	ID=id1750;Parent=rna1;Dbxref=GeneID:1096814;Note=23S ribosomal RNA. Coordinates determined by comparison with Streptomyces griseus 16S ribosomal RNA (EMBL:M76388).;gbkey=rRNA;gene=rrnC;product=23S ribosomal RNA
NC_003888.3	RefSeq	gene	1472193	1473723	.	-	.	ID=gene1378;Dbxref=GeneID:1096815;Name=rrnC;gbkey=Gene;gene=rrnC;gene_biotype=rRNA;locus_tag=SCOr03
NC_003888.3	RefSeq	rRNA	1472193	1473723	.	-	.	ID=rna2;Parent=gene1378;Dbxref=GeneID:1096815;Note=16S ribosomal RNA. Coordinates determined by comparison with Streptomyces griseus 16S ribosomal RNA (EMBL:M76388).;gbkey=rRNA;gene=rrnC;product=16S ribosomal RNA
NC_003888.3	RefSeq	exon	1472193	1473723	.	-	.	ID=id1751;Parent=rna2;Dbxref=GeneID:1096815;Note=16S ribosomal RNA. Coordinates determined by comparison with Streptomyces griseus 16S ribosomal RNA (EMBL:M76388).;gbkey=rRNA;gene=rrnC;product=16S ribosomal RNA
NC_003888.3	RefSeq	ribosome_entry_site	1474280	1474284	.	+	.	ID=id1752;gbkey=RBS
NC_003888.3	RefSeq	gene	1474291	1474740	.	+	.	ID=gene1379;Dbxref=GeneID:1096816;Name=SC1A8A.10;gbkey=Gene;gene=SC1A8A.10;gene_biotype=protein_coding;gene_synonym=SC1A8A.10;locus_tag=SCO1390
NC_003888.3	RefSeq	CDS	1474291	1474740	.	+	0	ID=cds1355;Parent=gene1379;Dbxref=Genbank:NP_625673.1,GeneID:1096816;Name=NP_625673.1;Note=SC1A8A.10%2C possible PTS system sugar phosphotransferase component IIA%2C len: 176a%3B similar to many e.g. TR:BAA82669 (EMBL:AB030569) phosphoenolpyruvate:carbohydrate phosphotransferase system family from Streptomyces griseus (149 aa) fasta scores%3B opt: 897%2C z-score: 951.7%2C E(): 0%2C 88.6%25 identity in 149 aa overlap and SW:P42015 (PTGA_BACST) PTS system%2C glucose-specific IIABC component from Bacillus stearothermophilus (324 aa) fasta scores%3B opt: 359%2C z-score: 386.4%2C E(): 4.3e-14%2C 40.6%25 identity in 143 aa overlap. Contains Pfam match to entry PF00358 PTS_EIIA_1%2C phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 1 and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC1A8A.10;product=PTS system sugar phosphotransferase component IIA;protein_id=NP_625673.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1474348	1474653	.	+	.	ID=id1753;Dbxref=GeneID:1096816;Note=Pfam match to entry PF00358 PTS_EIIA_1%2C phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 1%2C score 90.30%2C E-value 2e-24;gbkey=misc_feature;gene=SC1A8A.10
NC_003888.3	RefSeq	sequence_feature	1474612	1474635	.	+	.	ID=id1754;Dbxref=GeneID:1096816;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1A8A.10
NC_003888.3	RefSeq	gene	1474827	1476497	.	+	.	ID=gene1380;Dbxref=GeneID:1096817;Name=SC1A8A.11;gbkey=Gene;gene=SC1A8A.11;gene_biotype=protein_coding;gene_synonym=SC1A8A.11;locus_tag=SCO1391
NC_003888.3	RefSeq	CDS	1474827	1476497	.	+	0	ID=cds1356;Parent=gene1380;Dbxref=Genbank:NP_625674.1,GeneID:1096817;Name=NP_625674.1;Note=SC1A8A.11%2C phosphoenolpyruvate-protein phosphotransferase%2C len: 556 aa%3B similar to many e.g. SW:P08839 (PT1_ECOLI) PtsI%2C phosphoenolpyruvate-protein phosphotransferase from Escherichia coli (575 aa) fasta scores%3B opt: 473%2C z-score: 494.3%2C E(): 4.2e-20%2C 34.6%25 identity in 570 aa overlap. Contains Pfam match to entry PF00391 PEP-utilizers%2C PEP-utilizing enzymes%2C Prosite match to PS00370 PEP-utilizing enzymes phosphorylation site signature%2C Prosite match to PS00742 PEP-utilizing enzymes signature 2 and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC1A8A.11;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=NP_625674.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1475286	1476290	.	+	.	ID=id1755;Dbxref=GeneID:1096817;Note=Pfam match to entry PF00391 PEP-utilizers%2C PEP-utilizing enzymes%2C score 356.10%2C E-value 3.7e-103;gbkey=misc_feature;gene=SC1A8A.11
NC_003888.3	RefSeq	sequence_feature	1475367	1475402	.	+	.	ID=id1756;Dbxref=GeneID:1096817;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature;gbkey=misc_feature;gene=SC1A8A.11
NC_003888.3	RefSeq	sequence_feature	1476117	1476173	.	+	.	ID=id1757;Dbxref=GeneID:1096817;Note=PS00742 PEP-utilizing enzymes signature 2;gbkey=misc_feature;gene=SC1A8A.11
NC_003888.3	RefSeq	sequence_feature	1476249	1476272	.	+	.	ID=id1758;Dbxref=GeneID:1096817;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1A8A.11
NC_003888.3	RefSeq	gene	1476570	1477472	.	-	.	ID=gene1381;Dbxref=GeneID:1096818;Name=SC1A8A.12c;gbkey=Gene;gene=SC1A8A.12c;gene_biotype=protein_coding;gene_synonym=SC1A8A.12c;locus_tag=SCO1392
NC_003888.3	RefSeq	CDS	1476570	1477472	.	-	0	ID=cds1357;Parent=gene1381;Dbxref=Genbank:NP_625675.1,GeneID:1096818;Name=NP_625675.1;Note=SC1A8A.12%2C unknown%2C len: 300aa;gbkey=CDS;gene=SC1A8A.12c;product=hypothetical protein;protein_id=NP_625675.1;transl_table=11
NC_003888.3	RefSeq	gene	1477596	1479572	.	-	.	ID=gene1382;Dbxref=GeneID:1096819;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;gene_synonym=acsA,SC1A8A.13c;locus_tag=SCO1393
NC_003888.3	RefSeq	CDS	1477596	1479572	.	-	0	ID=cds1358;Parent=gene1382;Dbxref=Genbank:NP_625676.1,GeneID:1096819;Name=NP_625676.1;Note=AcsA%3B in Sinorhizobium meliloti this enzyme is required for acetoacetate activation%3B similar to acetyl-CoA synthase;gbkey=CDS;gene=acsA;product=acetoacetate-CoA ligase;protein_id=NP_625676.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1477908	1479206	.	-	.	ID=id1759;Dbxref=GeneID:1096819;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score -34.80%2C E-value 1.8e-13;gbkey=misc_feature;gene=acsA
NC_003888.3	RefSeq	sequence_feature	1478733	1478768	.	-	.	ID=id1760;Dbxref=GeneID:1096819;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=acsA
NC_003888.3	RefSeq	gene	1479786	1482173	.	+	.	ID=gene1383;Dbxref=GeneID:1096820;Name=SC1A8A.14;gbkey=Gene;gene=SC1A8A.14;gene_biotype=protein_coding;gene_synonym=SC1A8A.14;locus_tag=SCO1394
NC_003888.3	RefSeq	CDS	1479786	1482173	.	+	0	ID=cds1359;Parent=gene1383;Dbxref=Genbank:NP_625677.1,GeneID:1096820;Name=NP_625677.1;Note=SC1A8A.14%2C possible glycosyl hydrolase%2C len: 795 aa%3B similar to many e.g. SW:O59645 (AGLU_SULSO) alpha-glucosidase from Sulfolobus solfataricus (693 aa) fasta scores%3B opt: 535%2C z-score: 568.6%2C E(): 3e-24%2C 32.4%25 identity in 463 aa overlap. Contains Pfam match to entry PF01055 Glyco_hydro_31%2C Glycosyl hydrolases family 31.;gbkey=CDS;gene=SC1A8A.14;product=glycosyl hydrolase;protein_id=NP_625677.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1480617	1481933	.	+	.	ID=id1761;Dbxref=GeneID:1096820;Note=Pfam match to entry PF01055 Glyco_hydro_31%2C Glycosyl hydrolases family 31%2C score 354.90%2C E-value 1.9e-103;gbkey=misc_feature;gene=SC1A8A.14
NC_003888.3	RefSeq	gene	1482164	1482580	.	-	.	ID=gene1384;Dbxref=GeneID:1096821;Name=SC1A8A.15c;gbkey=Gene;gene=SC1A8A.15c;gene_biotype=protein_coding;gene_synonym=SC1A8A.15c;locus_tag=SCO1395
NC_003888.3	RefSeq	CDS	1482164	1482580	.	-	0	ID=cds1360;Parent=gene1384;Dbxref=Genbank:NP_625678.1,GeneID:1096821;Name=NP_625678.1;Note=SC1A8A.15c%2C mutT-like protein%2C len: 138 aa%3B similar to many eg. SW:P08337 (MUTT_ECOLI) mutator mutT protein from Escherichia coli (129 aa) fasta scores%3B opt: 131%2C z-score: 177.0%2C E(): 0.02%2C 33.7%25 identity in 101 aa overlap. Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and Prosite match to PS00893 mutT domain signature.;gbkey=CDS;gene=SC1A8A.15c;product=mutT-like protein;protein_id=NP_625678.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1482386	1482511	.	-	.	ID=id1762;Dbxref=GeneID:1096821;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 31.60%2C E-value 1.5e-07;gbkey=misc_feature;gene=SC1A8A.15c
NC_003888.3	RefSeq	sequence_feature	1482395	1482454	.	-	.	ID=id1763;Dbxref=GeneID:1096821;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SC1A8A.15c
NC_003888.3	RefSeq	gene	1482748	1483572	.	-	.	ID=gene1385;Dbxref=GeneID:1096822;Name=SC1A8A.16c;gbkey=Gene;gene=SC1A8A.16c;gene_biotype=protein_coding;gene_synonym=SC1A8A.16c;locus_tag=SCO1396
NC_003888.3	RefSeq	CDS	1482748	1483572	.	-	0	ID=cds1361;Parent=gene1385;Dbxref=Genbank:NP_625679.1,GeneID:1096822;Name=NP_625679.1;Note=SC1A8A.16c%2C probable D-alanyl-D-alanine dipeptidase (hypothetical protein)%2C len: 274aa%3B similar to many eg. TR:Q9X523 (EMBL:AF120672) pcgL%2C D-alanyl-D-alanine dipeptidase from Salmonella typhimurium (256 aa) fasta scores%3B opt: 851%2C z-score: 983.2%2C E(): 0%2C 49.6%25 identity in 252 aa overlap. Contains two Pfam matches to entry PF01427 Peptidase_M45%2C D-ala-D-ala dipeptidase and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC1A8A.16c;product=D-alanyl-D-alanine dipeptidase;protein_id=NP_625679.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1482775	1482978	.	-	.	ID=id1764;Dbxref=GeneID:1096822;Note=Pfam match to entry PF01427 Peptidase_M45%2C D-ala-D-ala dipeptidase%2C score 65.80%2C E-value 3.5e-17;gbkey=misc_feature;gene=SC1A8A.16c
NC_003888.3	RefSeq	sequence_feature	1483066	1483452	.	-	.	ID=id1765;Dbxref=GeneID:1096822;Note=Pfam match to entry PF01427 Peptidase_M45%2C D-ala-D-ala dipeptidase%2C score 95.60%2C E-value 1.9e-25;gbkey=misc_feature;gene=SC1A8A.16c
NC_003888.3	RefSeq	ribosome_entry_site	1483763	1483768	.	+	.	ID=id1766;gbkey=RBS
NC_003888.3	RefSeq	gene	1483776	1484795	.	+	.	ID=gene1386;Dbxref=GeneID:1096823;Name=SC1A8A.17;gbkey=Gene;gene=SC1A8A.17;gene_biotype=protein_coding;gene_synonym=SC1A8A.17;locus_tag=SCO1397
NC_003888.3	RefSeq	CDS	1483776	1484795	.	+	0	ID=cds1362;Parent=gene1386;Dbxref=Genbank:NP_625680.1,GeneID:1096823;Name=NP_625680.1;Note=SC1A8A.17%2C unknown%2C len: 339aa;gbkey=CDS;gene=SC1A8A.17;product=hypothetical protein;protein_id=NP_625680.1;transl_table=11
NC_003888.3	RefSeq	gene	1484800	1485507	.	+	.	ID=gene1387;Dbxref=GeneID:1096824;Name=SC1A8A.18;end_range=1485507,.;gbkey=Gene;gene=SC1A8A.18;gene_biotype=protein_coding;gene_synonym=SC1A8A.18;locus_tag=SCO1398;partial=true
NC_003888.3	RefSeq	CDS	1484800	1485507	.	+	0	ID=cds1363;Parent=gene1387;Dbxref=Genbank:NP_625681.1,GeneID:1096824;Name=NP_625681.1;Note=SC1A8A.18%2C unknown%2C len: 236 aa%3B contains a region similar to many eg. SW:Q11024 (YD54_MYCTU) hypothetical protein from Mycobacterium tuberculosis (623 aa) fasta scores%3B opt: 202%2C z-score: 200.1%2C E(): 0.001%2C 31.5%25 identity in 178 aa overlap. Contains Pfam match to entry PF00990 DUF9%2C Domain of unknown function.;end_range=1485507,.;gbkey=CDS;gene=SC1A8A.18;partial=true;product=hypothetical protein;protein_id=NP_625681.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1484815	1485273	.	+	.	ID=id1767;Dbxref=GeneID:1096824;Note=Pfam match to entry PF00990 DUF9%2C Domain of unknown function%2C score 13.60%2C E-value 7.7e-06;gbkey=misc_feature;gene=SC1A8A.18
NC_003888.3	RefSeq	gene	1485684	1486289	.	-	.	ID=gene1388;Dbxref=GeneID:1096825;Name=cvnD4;gbkey=Gene;gene=cvnD4;gene_biotype=protein_coding;gene_synonym=cvnD4,SC1A8A.19c;locus_tag=SCO1399
NC_003888.3	RefSeq	CDS	1485684	1486289	.	-	0	ID=cds1364;Parent=gene1388;Dbxref=Genbank:NP_625682.1,GeneID:1096825;Name=NP_625682.1;Note=SC1A8A.19c%2C cvnD4%2C possible ATP/GTP-binding protein%2C len: 201aa%3B similar to others from Streptomyces coelicolor and Mycobacterium tuberculosis eg. TR:Q9XAE1 (EMBL:AL079356) ATP/GTP-binding protein from Streptomyces coelicolor (191 aa) fasta scores%3B opt: 742%2C z-score: 890.7%2C E(): 0%2C 60.9%25 identity in 184 aa overlap. Local genetic arrangement also seems to be conserved for the Streptomyces coelicolor paralogues. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=cvnD4;product=ATP/GTP-binding protein;protein_id=NP_625682.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1486197	1486220	.	-	.	ID=id1768;Dbxref=GeneID:1096825;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD4
NC_003888.3	RefSeq	ribosome_entry_site	1486299	1486304	.	-	.	ID=id1769;gbkey=RBS
NC_003888.3	RefSeq	gene	1486339	1486734	.	-	.	ID=gene1389;Dbxref=GeneID:1096826;Name=cvnC4;gbkey=Gene;gene=cvnC4;gene_biotype=protein_coding;gene_synonym=cvnC4,SC1A8A.20c;locus_tag=SCO1400
NC_003888.3	RefSeq	CDS	1486339	1486734	.	-	0	ID=cds1365;Parent=gene1389;Dbxref=Genbank:NP_625683.1,GeneID:1096826;Name=NP_625683.1;Note=SC1A8A.20c%2C cvnC4%2C unknown%2C len: 131 aa%3B similar to others from Streptomyces coelicolor and Mycobacterium tuberculosis eg. TR:O86523 (EMBL:AL031124) hypothetical protein from Streptomyces coelicolor (132 aa) fasta scores%3B opt: 262%2C z-score: 339.3%2C E(): 1.8e-11%2C 41.9%25 identity in 124 aa overlap and to TR:Q9KZI7 (EMBL:AL353863) Streptomyces coelicolor hypothetical protein SCG8A.12c%2C 137 aa%3B fasta scores: opt: 480 Z-score: 582.4 E(): 8.3e-25%3B 59.690%25 identity in 129 aa overlap. Local genetic arrangement also seems to be conserved for the Streptomyces coelicolor paralogues;gbkey=CDS;gene=cvnC4;product=hypothetical protein;protein_id=NP_625683.1;transl_table=11
NC_003888.3	RefSeq	gene	1486745	1487179	.	-	.	ID=gene1390;Dbxref=GeneID:1096827;Name=cvnB4;gbkey=Gene;gene=cvnB4;gene_biotype=protein_coding;gene_synonym=cvnB4,SC1A8A.21c;locus_tag=SCO1401
NC_003888.3	RefSeq	CDS	1486745	1487179	.	-	0	ID=cds1366;Parent=gene1390;Dbxref=Genbank:NP_625684.1,GeneID:1096827;Name=NP_625684.1;Note=SC1A8A.21c%2C cvnB4%2C unknown%2C len: 144 aa%3B similar to others from Streptomyces coelicolor and Mycobacterium tuberculosis e.g. TR:Q9X835 (EMBL:AL049727) hypothetical protein from Streptomyces coelicolor (139 aa) fasta scores%3B opt: 408%2C z-score: 500.5%2C E(): 1.9e-20%2C 47.6%25 identity in 143 aa overlap. Local genetic arrangement also seems to be conserved for the Streptomyces coelicolor paralogues;gbkey=CDS;gene=cvnB4;product=hypothetical protein;protein_id=NP_625684.1;transl_table=11
NC_003888.3	RefSeq	gene	1487176	1490007	.	-	.	ID=gene1391;Dbxref=GeneID:1096828;Name=cvnA4;gbkey=Gene;gene=cvnA4;gene_biotype=protein_coding;gene_synonym=cvnA4,SC1A8A.22c;locus_tag=SCO1402
NC_003888.3	RefSeq	CDS	1487176	1490007	.	-	0	ID=cds1367;Parent=gene1391;Dbxref=Genbank:NP_625685.1,GeneID:1096828;Name=NP_625685.1;Note=SC1A8A.22c%2C cvnA4%2C possible large hypothetical protein%2C len: 943aa%3B similar to others from Streptomyces coelicolor and Mycobacterium tuberculosis eg. TR:Q9X836 (EMBL:AL049727) large hypothetical protein from Streptomyces coelicolor (877 aa) fasta scores%3B opt: 1356%2C z-score: 1302.5%2C E(): 0%2C 34.5%25 identity in 887 aa overlap. Local genetic arrangement also seems to be conserved for the Streptomyces coelicolor paralogues. Contains a possible non-cleavable N-terminal signal sequence.;gbkey=CDS;gene=cvnA4;product=large hypothetical protein;protein_id=NP_625685.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1490010	1490014	.	-	.	ID=id1770;gbkey=RBS
NC_003888.3	RefSeq	gene	1490427	1490969	.	+	.	ID=gene1392;Dbxref=GeneID:1096829;Name=SC1A8A.23;gbkey=Gene;gene=SC1A8A.23;gene_biotype=protein_coding;gene_synonym=SC1A8A.23;locus_tag=SCO1403
NC_003888.3	RefSeq	CDS	1490427	1490969	.	+	0	ID=cds1368;Parent=gene1392;Dbxref=Genbank:NP_625686.1,GeneID:1096829;Name=NP_625686.1;Note=SC1A8A.23%2C possible membrane protein%2C len: 180aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SC1A8A.23;product=hypothetical protein;protein_id=NP_625686.1;transl_table=11
NC_003888.3	RefSeq	gene	1491016	1494021	.	-	.	ID=gene1393;Dbxref=GeneID:1096830;Name=SC1A8A.24c;gbkey=Gene;gene=SC1A8A.24c;gene_biotype=protein_coding;gene_synonym=SC1A8A.24c;locus_tag=SCO1404
NC_003888.3	RefSeq	CDS	1491016	1494021	.	-	0	ID=cds1369;Parent=gene1393;Dbxref=Genbank:NP_625687.1,GeneID:1096830;Name=NP_625687.1;Note=SC1A8A.24c%2C unknown%2C len: 1001aa%3B weakly similar to many other large proteins of undefined function eg. TR:Q9Z5A4 (EMBL:AL035478) hypothetical protein from Streptomyces coelicolor (1156 aa) fasta scores%3B opt: 210%2C z-score: 222.7%2C E(): 5.7e-05%2C 24.7%25 identity in 636 aa overlap.;gbkey=CDS;gene=SC1A8A.24c;product=hypothetical protein;protein_id=NP_625687.1;transl_table=11
NC_003888.3	RefSeq	gene	1494024	1495871	.	-	.	ID=gene1394;Dbxref=GeneID:1096831;Name=SC1A8A.25c;gbkey=Gene;gene=SC1A8A.25c;gene_biotype=protein_coding;gene_synonym=SC1A8A.25c;locus_tag=SCO1405
NC_003888.3	RefSeq	CDS	1494024	1495871	.	-	0	ID=cds1370;Parent=gene1394;Dbxref=Genbank:NP_625688.1,GeneID:1096831;Name=NP_625688.1;Note=SC1A8A.25c%2C possible heat shock protein (hsp90-family)%2C len: 615aa%3B similar to many eg. TR:O43642 (EMBL:AF043254) heat shock protein 75 from Homo sapiens (Human) (649 aa) fasta scores%3B opt: 364%2C z-score: 416.0%2C E(): 9.7e-16%2C 25.5%25 identity in 639 aa overlap. Contains two Pfam matches to entry PF00183 HSP90%2C Hsp90 protein.;gbkey=CDS;gene=SC1A8A.25c;product=HSP90 family protein;protein_id=NP_625688.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1494031	1494035	.	-	.	ID=id1771;Dbxref=GeneID:1096831;gbkey=RBS;gene=SC1A8A.25c
NC_003888.3	RefSeq	sequence_feature	1494852	1495007	.	-	.	ID=id1772;Dbxref=GeneID:1096831;Note=Pfam match to entry PF00183 HSP90%2C Hsp90 protein%2C score 4.10%2C E-value 3.4;gbkey=misc_feature;gene=SC1A8A.25c
NC_003888.3	RefSeq	sequence_feature	1495341	1495841	.	-	.	ID=id1773;Dbxref=GeneID:1096831;Note=Pfam match to entry PF00183 HSP90%2C Hsp90 protein%2C score 37.90%2C E-value 8.4e-09;gbkey=misc_feature;gene=SC1A8A.25c
NC_003888.3	RefSeq	gene	1495964	1496950	.	-	.	ID=gene1395;Dbxref=GeneID:1096832;Name=SC1A8A.26c;gbkey=Gene;gene=SC1A8A.26c;gene_biotype=protein_coding;gene_synonym=SC1A8A.26c;locus_tag=SCO1406
NC_003888.3	RefSeq	CDS	1495964	1496950	.	-	0	ID=cds1371;Parent=gene1395;Dbxref=Genbank:NP_625689.1,GeneID:1096832;Name=NP_625689.1;Note=SC1A8A.26c%2C hypothetical protein%2C len: 328 aa%3B weakly similar to TR:CAB46782 (EMBL:AL096811) hypothetical protein from Streptomyces coelicolor (338 aa) fasta scores%3B opt: 140%2C z-score: 170.3%2C E(): 0.047%2C 26.9%25 identity in 338 aa overlap.;gbkey=CDS;gene=SC1A8A.26c;product=hypothetical protein;protein_id=NP_625689.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1496958	1496962	.	-	.	ID=id1774;gbkey=RBS
NC_003888.3	RefSeq	gene	1497056	1501717	.	-	.	ID=gene1396;Dbxref=GeneID:1096833;Name=SC1A8A.27c;gbkey=Gene;gene=SC1A8A.27c;gene_biotype=protein_coding;gene_synonym=SC1A8A.27c,SC6D7.32;locus_tag=SCO1407
NC_003888.3	RefSeq	CDS	1497056	1501717	.	-	0	ID=cds1372;Parent=gene1396;Dbxref=Genbank:NP_733533.1,GeneID:1096833;Name=NP_733533.1;Note=SC6D7.32%2C unknown%2C len: > 1425 aa. Weakly similar to several including: Streptomyces coelicolor TR:Q9Z5A4(EMBL:AL035478)  hypothetical protein SC2G5.19 (1156 aa)%2C fasta scores opt: 327 z-score: 314.0 E(): 4.1e-10 28.0%25 identity in 938 aa overlap and Rhodobacter capsulatus TR:O68032(EMBL:AF010496) potential exonuclease (1238 aa)%2C fasta scores opt: 439 z-score: 421.6 E(): 4.1e-16 28.8%25 identity in 1154 aa overlap. The predicted protein product of this CDS is alanine rich and contains multiple probable coiled-coils between residues: 369 to 401 (33 residues)%2C 406 to 433 (28 residues)%2C 483 to 519 (37 residues)%2C 563 to 604 (42 residues)%2C850 to 921 (72 residues)%2C926 to 982 (57 residues)%2C 1025 to 1054 (30 residues)%2C1072 to 1106 (35 residues)%2C 1124 to 1167 (44 residues)%2C 1199 to 1232 (34 residues) and 1278 to 1309 (32 residues).~SC1A8A.26c%2C partial CDS%2C unknown%2C len: >162aa%3B forms the C-terminal region of SC6D7.32 (TR:CAB61684 EMBL:AL133213) which has weak similarity to proteins of unknown function.;gbkey=CDS;gene=SC1A8A.27c;product=hypothetical protein;protein_id=NP_733533.1;transl_table=11
NC_003888.3	RefSeq	gene	1501823	1502704	.	-	.	ID=gene1397;Dbxref=GeneID:1096834;Name=SC6D7.31;gbkey=Gene;gene=SC6D7.31;gene_biotype=protein_coding;gene_synonym=SC6D7.31;locus_tag=SCO1408
NC_003888.3	RefSeq	CDS	1501823	1502704	.	-	0	ID=cds1373;Parent=gene1397;Dbxref=Genbank:NP_625690.1,GeneID:1096834;Name=NP_625690.1;Note=SC6D7.31%2C possible membrane protein%2C len: 293 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC6D7.31;product=hypothetical protein;protein_id=NP_625690.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1502713	1502717	.	-	.	ID=id1775;gbkey=RBS
NC_003888.3	RefSeq	gene	1502793	1504319	.	-	.	ID=gene1398;Dbxref=GeneID:1096835;Name=SC6D7.30;gbkey=Gene;gene=SC6D7.30;gene_biotype=protein_coding;gene_synonym=SC6D7.30;locus_tag=SCO1409
NC_003888.3	RefSeq	CDS	1502793	1504319	.	-	0	ID=cds1374;Parent=gene1398;Dbxref=Genbank:NP_625691.1,GeneID:1096835;Name=NP_625691.1;Note=SC6D7.30%2C possible membrane protein%2C len: 508 aa. Contains a possible membrane spanning hydrophobic domain and a probable coiled-coil between residues 259..286 (28 residues);gbkey=CDS;gene=SC6D7.30;product=hypothetical protein;protein_id=NP_625691.1;transl_table=11
NC_003888.3	RefSeq	gene	1504428	1505123	.	-	.	ID=gene1399;Dbxref=GeneID:1096836;Name=SC6D7.29;gbkey=Gene;gene=SC6D7.29;gene_biotype=protein_coding;gene_synonym=SC6D7.29;locus_tag=SCO1410
NC_003888.3	RefSeq	CDS	1504428	1505123	.	-	0	ID=cds1375;Parent=gene1399;Dbxref=Genbank:NP_625692.1,GeneID:1096836;Name=NP_625692.1;Note=SC6D7.29%2C GntR-family transcriptional regulator%2C len: 231 aa. Similar to many other regulators e.g. Bacillus licheniformis SW:GNTR_BACLI(EMBL:D31631) gluconate operon transcriptional repressor (P28 protein) (243 aa)%2C fasta scores opt: 183 z-score: 234.8 E(): 1.1e-05 31.2%25 identity in 138 aa overlap and Chelatobacter heintzii SW:NTRA_CHEHE(EMBL:U39411) NTA operon transcriptional regulator (210 aa)%2C fasta scores opt: 222 z-score: 284.0 E(): 1.9e-08 31.8%25 identity in 195 aa overlap. Contains a PS00043 Bacterial regulatory proteins%2C gntR family signature and a Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family. Contains a helix-turn-helix motif between residues 44..65 (+2.58 SD).;gbkey=CDS;gene=SC6D7.29;product=GntR family transcriptional regulator;protein_id=NP_625692.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1504878	1505054	.	-	.	ID=id1776;Dbxref=GeneID:1096836;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 40.00%2C E-value 8.4e-11;gbkey=misc_feature;gene=SC6D7.29
NC_003888.3	RefSeq	sequence_feature	1504926	1505000	.	-	.	ID=id1777;Dbxref=GeneID:1096836;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SC6D7.29
NC_003888.3	RefSeq	ribosome_entry_site	1505251	1505256	.	+	.	ID=id1778;gbkey=RBS
NC_003888.3	RefSeq	gene	1505261	1506583	.	+	.	ID=gene1400;Dbxref=GeneID:1096837;Name=SC6D7.28c;gbkey=Gene;gene=SC6D7.28c;gene_biotype=protein_coding;gene_synonym=SC6D7.28c;locus_tag=SCO1411
NC_003888.3	RefSeq	CDS	1505261	1506583	.	+	0	ID=cds1376;Parent=gene1400;Dbxref=Genbank:NP_625693.1,GeneID:1096837;Name=NP_625693.1;Note=SC6D7.28c%2C possible transmembrane transport protein%2C len: 440 aa. Highly similar to many other membrane transport proteins e.g. Escherichia coli SW:CIT1_ECOLI(EMBL:M11559) citrate-proton symporter (citrate transporter) (431 aa)%2C fasta scores opt: 349 z-score: 368.9 E(): 3.6e-13 25.1%25 identity in 438 aa overlap and Yersinia pestis TR:Q9ZC42(EMBL:AL031866) transport protein (409 aa)%2C fasta scores opt: 1363 z-score: 1421.9 E():0 49.5%25 identity in 410 aa overlap. Contains a Prosite hit to PS00217 Sugar transport proteins signature 2 and a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter. Also contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6D7.28c;product=transmembrane transport protein;protein_id=NP_625693.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1505381	1506580	.	+	.	ID=id1779;Dbxref=GeneID:1096837;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 79.60%2C E-value 6.5e-20;gbkey=misc_feature;gene=SC6D7.28c
NC_003888.3	RefSeq	sequence_feature	1505672	1505749	.	+	.	ID=id1780;Dbxref=GeneID:1096837;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=SC6D7.28c
NC_003888.3	RefSeq	gene	1506580	1507413	.	+	.	ID=gene1401;Dbxref=GeneID:1096838;Name=SC6D7.27c;gbkey=Gene;gene=SC6D7.27c;gene_biotype=protein_coding;gene_synonym=SC6D7.27c;locus_tag=SCO1412
NC_003888.3	RefSeq	CDS	1506580	1507413	.	+	0	ID=cds1377;Parent=gene1401;Dbxref=Genbank:NP_625694.1,GeneID:1096838;Name=NP_625694.1;Note=SC6D7.27c%2C unknown%2C len: 277 aa. Highly similar to proteins of unknown function from Bacillus subtilis SW:YCSI_BACSU(EMBL:D38161) hypothetical 28.1 KD protein (257 aa)%2C fasta scores opt: 945 z-score: 1112.7 E():0 52.5%25 identity in 255 aa overlap and Schizosaccharomyces pombe (Fission yeast) SW:YA01_SCHPO(EMBL:Z49811) hypothetical 33.8 KD protein (301 aa)%2C fasta scores opt: 596 z-score: 703.6 E(): 8.1e-32 40.1%25 identity in 252 aa overlap.;gbkey=CDS;gene=SC6D7.27c;product=hypothetical protein;protein_id=NP_625694.1;transl_table=11
NC_003888.3	RefSeq	gene	1507860	1509278	.	-	.	ID=gene1402;Dbxref=GeneID:1096839;Name=SC6D7.26;gbkey=Gene;gene=SC6D7.26;gene_biotype=protein_coding;gene_synonym=SC6D7.26;locus_tag=SCO1413
NC_003888.3	RefSeq	CDS	1507860	1509278	.	-	0	ID=cds1378;Parent=gene1402;Dbxref=Genbank:NP_625695.1,GeneID:1096839;Name=NP_625695.1;Note=SC6D7.26%2C unknown%2C len: 472 aa.;gbkey=CDS;gene=SC6D7.26;product=hypothetical protein;protein_id=NP_625695.1;transl_table=11
NC_003888.3	RefSeq	gene	1509614	1510018	.	-	.	ID=gene1403;Dbxref=GeneID:1096840;Name=SC6D7.25;gbkey=Gene;gene=SC6D7.25;gene_biotype=protein_coding;gene_synonym=SC6D7.25;locus_tag=SCO1414
NC_003888.3	RefSeq	CDS	1509614	1510018	.	-	0	ID=cds1379;Parent=gene1403;Dbxref=Genbank:NP_625696.1,GeneID:1096840;Name=NP_625696.1;Note=SC6D7.25. possible ankyrin%2C len: 134 aa. Similar to many Prokaryotic and Eukaryotic proteins containing ankyrin repeat domains e.g. Pseudomonas aeruginosa TR:Q51402(EMBL:U59457) AnkB (ankyrin) (180 aa)%2C fasta scores opt: 263 z-score: 329.0 E(): 6e-11 40.7%25 identity in 118 aa overlap and Xiphophorus helleri TR:AAD21313(EMBL:AF132500) P13CDKN2X (124 aa)%2C fasta scores opt: 192 z-score: 246.7 E(): 2.3e-06 34.7%25 identity in 121 aa overlap. Also similar to Streptomyces coelicolor (EMBL:AL121855) hypothetical protein SCF62.06 (131 aa)%2C fasta scores opt:387 z-score: 407.2 E(): 2.5e-17 53.8%25 identity in 119 aa overlap. Contains 2xPfam match to entry PF00023 ank%2C Ank repeat.;gbkey=CDS;gene=SC6D7.25;product=ankyrin;protein_id=NP_625696.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1509680	1509778	.	-	.	ID=id1781;Dbxref=GeneID:1096840;Note=Pfam match to entry PF00023 ank%2C Ank repeat%2C score 26.20%2C E-value 0.00074;gbkey=misc_feature;gene=SC6D7.25
NC_003888.3	RefSeq	sequence_feature	1509779	1509877	.	-	.	ID=id1782;Dbxref=GeneID:1096840;Note=Pfam match to entry PF00023 ank%2C Ank repeat%2C score 26.60%2C E-value 0.00057;gbkey=misc_feature;gene=SC6D7.25
NC_003888.3	RefSeq	gene	1510276	1510470	.	+	.	ID=gene1404;Dbxref=GeneID:1096841;Name=SC6D7.24c;gbkey=Gene;gene=SC6D7.24c;gene_biotype=protein_coding;gene_synonym=SC6D7.24c;locus_tag=SCO1415
NC_003888.3	RefSeq	CDS	1510276	1510470	.	+	0	ID=cds1380;Parent=gene1404;Dbxref=Genbank:NP_625697.1,GeneID:1096841;Name=NP_625697.1;Note=SC6D7.24c%2C possible membrane protein%2C len: 582 aa. Highly similar to the Streptomyces coelicolor hypothetical protein SCF37.26c (64 aa)%2C fasta scores opt: 207 z-score: 284.7 E(): 1.7e-10 52.4%25 identity in 63 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6D7.24c;product=hypothetical protein;protein_id=NP_625697.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1510513	1510518	.	+	.	ID=id1783;gbkey=RBS
NC_003888.3	RefSeq	gene	1510524	1512272	.	+	.	ID=gene1405;Dbxref=GeneID:1096842;Name=SC6D7.23c;gbkey=Gene;gene=SC6D7.23c;gene_biotype=protein_coding;gene_synonym=SC6D7.23c;locus_tag=SCO1416
NC_003888.3	RefSeq	CDS	1510524	1512272	.	+	0	ID=cds1381;Parent=gene1405;Dbxref=Genbank:NP_625698.1,GeneID:1096842;Name=NP_625698.1;Note=SC6D7.23c%2C possible membrane protein%2C len: 582 aa. Contains a possible membrane spanning hydrophobic domain close to th N-terminus.;gbkey=CDS;gene=SC6D7.23c;product=hypothetical protein;protein_id=NP_625698.1;transl_table=11
NC_003888.3	RefSeq	gene	1512639	1514141	.	-	.	ID=gene1406;Dbxref=GeneID:1096843;Name=SC6D7.22;gbkey=Gene;gene=SC6D7.22;gene_biotype=protein_coding;gene_synonym=SC6D7.22;locus_tag=SCO1417
NC_003888.3	RefSeq	CDS	1512639	1514141	.	-	0	ID=cds1382;Parent=gene1406;Dbxref=Genbank:NP_625699.1,GeneID:1096843;Name=NP_625699.1;Note=SC6D7.22%2C possible GntR-family regulatory protein%2C len: 500 aa. Similar to several including: Streptomyces coelicolor TR:O88047 (EMBL:AL031541) transcriptional regulator SCI35.09C (480 aa)%2C fasta scores opt: 403 z-score: 439.9 E(): 4e-17 29.0%25 identity in 483 aa overlap and Streptomyces venezuelae TR:AAF01064 (EMBL:AF189258) transcriptional regulator (fragment) (507 aa)%2C fasta scores opt: 444 z-score: 484.0 E(): 1.4e-19 31.8%25 identity in 462 aa overlap. Contains a Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and a Prosite hit to PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=CDS;gene=SC6D7.22;product=GntR family transcriptional regulator;protein_id=NP_625699.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1513860	1514030	.	-	.	ID=id1784;Dbxref=GeneID:1096843;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 42.90%2C E-value 1e-11;gbkey=misc_feature;gene=SC6D7.22
NC_003888.3	RefSeq	sequence_feature	1513899	1513973	.	-	.	ID=id1785;Dbxref=GeneID:1096843;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SC6D7.22
NC_003888.3	RefSeq	gene	1514244	1514936	.	+	.	ID=gene1407;Dbxref=GeneID:1096844;Name=SC6D7.21c;gbkey=Gene;gene=SC6D7.21c;gene_biotype=protein_coding;gene_synonym=SC6D7.21c;locus_tag=SCO1418
NC_003888.3	RefSeq	CDS	1514244	1514936	.	+	0	ID=cds1383;Parent=gene1407;Dbxref=Genbank:NP_625700.1,GeneID:1096844;Name=NP_625700.1;Note=SC6D7.21c%2C possible integral membrane protein%2C len: 230 aa. Similar to several proteins of undefined function e.g. Haemophilus influenzae SW:Y522_HAEIN (EMBL:U32734) hypothetical protein HI0522 (218 aa)%2C fasta scores opt: 492 z-score: 566.3 E(): 3.6e-24 39.1%25 identity in 207 aa overlap and Bacillus subtilis SW:YYAS_BACSU(EMBL:D26185) hypothetical 22.0 KD protein (201 aa)%2C fasta scores opt: 232 z-score: 273.7 E(): 7.2e-08 26.5%25 identity in 181 aa overlap. Contains a 3xSRQ 1x SGQ repeat region in the N-terminus;gbkey=CDS;gene=SC6D7.21c;product=hypothetical protein;protein_id=NP_625700.1;transl_table=11
NC_003888.3	RefSeq	gene	1514933	1515700	.	+	.	ID=gene1408;Dbxref=GeneID:1096845;Name=SC6D7.20c;gbkey=Gene;gene=SC6D7.20c;gene_biotype=protein_coding;gene_synonym=SC6D7.20c;locus_tag=SCO1419
NC_003888.3	RefSeq	CDS	1514933	1515700	.	+	0	ID=cds1384;Parent=gene1408;Dbxref=Genbank:NP_625701.1,GeneID:1096845;Name=NP_625701.1;Note=SC6D7.20c%2C phosphodiesterase%2C len: 255 aa. Similar to several including Escherichia coli SW:UGPQ_ECOLI(EMBL:X14437) glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (247 aa)%2C fasta scores opt: 215 z-score: 267.5 E(): 1.6e-07 27.0%25 identity in 252 aa overlap and Mycobacterium tuberculosis TR:O07244(EMBL:Z96800) hypothetical 28.3 KD protein (256 aa)%2C fasta scores opt: 632 z-score: 771.7 E(): 0 44.2%25 identity in 251 aa overlap.;gbkey=CDS;gene=SC6D7.20c;product=phosphodiesterase;protein_id=NP_625701.1;transl_table=11
NC_003888.3	RefSeq	gene	1515752	1517212	.	+	.	ID=gene1409;Dbxref=GeneID:1096846;Name=SC6D7.19c;gbkey=Gene;gene=SC6D7.19c;gene_biotype=protein_coding;gene_synonym=SC6D7.19c;locus_tag=SCO1420
NC_003888.3	RefSeq	CDS	1515752	1517212	.	+	0	ID=cds1385;Parent=gene1409;Dbxref=Genbank:NP_625702.1,GeneID:1096846;Name=NP_625702.1;Note=SC6D7.19c%2C possible integral membrane protein%2C len: 486 aa. Similar to several including: Bacillus subtilis SW:YXIO_BACSU(EMBL:D83026) hypothetical 47.3 KD protein (428 aa)%2C fasta scores opt: 735 z-score: 858.7 E():0 29.7%25 identity in 434 aa overlap and Mycobacterium leprae TR:O07710(EMBL:Z97179) hypothetical 48.7 KD protein (464 aa)%2C fasta scores opt: 327 z-score: 383.0 E(): 5.9e-14 29.7%25 identity in 445 aa overlap. Contains a TTA /leucine codon%2C possible target for bldA regulation and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6D7.19c;product=hypothetical protein;protein_id=NP_625702.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1517159	1517161	.	+	.	ID=id1786;Dbxref=GeneID:1096846;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC6D7.19c
NC_003888.3	RefSeq	gene	1517384	1517758	.	+	.	ID=gene1410;Dbxref=GeneID:1096847;Name=SC6D7.18c;gbkey=Gene;gene=SC6D7.18c;gene_biotype=protein_coding;gene_synonym=SC6D7.18c;locus_tag=SCO1421
NC_003888.3	RefSeq	CDS	1517384	1517758	.	+	0	ID=cds1386;Parent=gene1410;Dbxref=Genbank:NP_625703.1,GeneID:1096847;Name=NP_625703.1;Note=SC6D7.18c%2C unknown%2C len: 124 aa. Highly similar to several including: Streptomyces coelicolor TR:Q9Z522(EMBL:AL035591)  electron transport protein SCC54.03C (111 aa)%2C fasta scores opt: 223 z-score: 290.6 E(): 8.2e-09 33.6%25 identity in 107 aa overlap and Mycobacterium tuberculosis TR:O53492(EMBL:AL021899) hypothetical 13.0 KD protein (111 aa)%2C fasta scores opt: 426 z-score: 539.6 E(): 1.1e-22 57.4%25 identity in 108 aa overlap.;gbkey=CDS;gene=SC6D7.18c;product=hypothetical protein;protein_id=NP_625703.1;transl_table=11
NC_003888.3	RefSeq	gene	1517861	1518445	.	-	.	ID=gene1411;Dbxref=GeneID:1096848;Name=SC6D7.17;gbkey=Gene;gene=SC6D7.17;gene_biotype=protein_coding;gene_synonym=SC6D7.17;locus_tag=SCO1422
NC_003888.3	RefSeq	CDS	1517861	1518445	.	-	0	ID=cds1387;Parent=gene1411;Dbxref=Genbank:NP_625704.1,GeneID:1096848;Name=NP_625704.1;Note=SC6D7.17%2C possible membrane protein%2C len: 194 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6D7.17;product=hypothetical protein;protein_id=NP_625704.1;transl_table=11
NC_003888.3	RefSeq	gene	1518492	1519400	.	-	.	ID=gene1412;Dbxref=GeneID:1096849;Name=SC6D7.16;gbkey=Gene;gene=SC6D7.16;gene_biotype=protein_coding;gene_synonym=SC6D7.16;locus_tag=SCO1423
NC_003888.3	RefSeq	CDS	1518492	1519400	.	-	0	ID=cds1388;Parent=gene1412;Dbxref=Genbank:NP_625705.1,GeneID:1096849;Name=NP_625705.1;Note=SC6D7.16%2C possible glycosyl transferase%2C len: 302 aa. Similar to many eukaryotic dolichol-phosphate-mannose synthases e.g. Mus musculus (Mouse) TR:O70152 (EMBL:AB004789) (260 aa)%2C fasta scores opt: 474 z-score: 560.2 E(): 7.9e-24 37.9%25 identity in 227 aa overlap. Also similar to a number of Prokaryotic proteins of undefined function e.g. Mycobacterium leprae TR:O32929 (EMBL:Z98604) hypothetical 30.1 KD protein (277 aa)%2C fasta scores opt: 917 z-score: 1076.0 E():0 52.0%25 identity in 281 aa overlap. Contains a Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases.;gbkey=CDS;gene=SC6D7.16;product=glycosyl transferase;protein_id=NP_625705.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1518831	1519331	.	-	.	ID=id1787;Dbxref=GeneID:1096849;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 42.20%2C E-value 1.2e-08;gbkey=misc_feature;gene=SC6D7.16
NC_003888.3	RefSeq	gene	1519926	1521536	.	-	.	ID=gene1413;Dbxref=GeneID:1096850;Name=SC6D7.15;gbkey=Gene;gene=SC6D7.15;gene_biotype=protein_coding;gene_synonym=SC6D7.15;locus_tag=SCO1424
NC_003888.3	RefSeq	CDS	1519926	1521536	.	-	0	ID=cds1389;Parent=gene1413;Dbxref=Genbank:NP_625706.1,GeneID:1096850;Name=NP_625706.1;Note=SC6D7.15%2C unknown%2C len: 536 aa. Highly similar to a protein of undefined function from Mycobacterium tuberculosis TR:O53494(EMBL:AL021899) hypothetical 55.9 KD protein (534 aa)%2C fasta scores opt: 1708 z-score: 1846.6 E():0 53.7%25 identity in 534 aa overlap.;gbkey=CDS;gene=SC6D7.15;product=hypothetical protein;protein_id=NP_625706.1;transl_table=11
NC_003888.3	RefSeq	gene	1521620	1522117	.	-	.	ID=gene1414;Dbxref=GeneID:1096851;Name=SC6D7.14;gbkey=Gene;gene=SC6D7.14;gene_biotype=protein_coding;gene_synonym=SC6D7.14;locus_tag=SCO1425
NC_003888.3	RefSeq	CDS	1521620	1522117	.	-	0	ID=cds1390;Parent=gene1414;Dbxref=Genbank:NP_625707.1,GeneID:1096851;Name=NP_625707.1;Note=SC6D7.14%2C possible AsnC-family transcriptional regulatory protein%2C len: 165 aa. Highly similar to several proteins of unknown function and to the Lrp (leucine-responsive regulatory protein) global regulatory proteins e.g. Escherichia coli SW:LRP_ECOLI(EMBL:M35869) leucine-responsive regulatory protein (163 aa)%2C fasta scores opt: 283 z-score: 348.1 E(): 5.2e-12 37.1%25 identity in 140 aa overlap and Mycobacterium tuberculosis TR:P96896(EMBL:Z92771) hypothetical 16.5 KD protein (150 aa)%2C fasta scores opt: 503 z-score: 608.4 E(): 1.6e-26 50.3%25 identity in 143 aa overlap. Contains a Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family and a Prosite hit to PS00519 Bacterial regulatory proteins%2C asnC family signature. Contains a helix-turn-helix motif between residues 38..59 (+4.53 SD).;gbkey=CDS;gene=SC6D7.14;product=transcription regulator AsnC;protein_id=NP_625707.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1521686	1521988	.	-	.	ID=id1788;Dbxref=GeneID:1096851;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 100.60%2C E-value 3.1e-26;gbkey=misc_feature;gene=SC6D7.14
NC_003888.3	RefSeq	sequence_feature	1521926	1522006	.	-	.	ID=id1789;Dbxref=GeneID:1096851;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature;gbkey=misc_feature;gene=SC6D7.14
NC_003888.3	RefSeq	gene	1522328	1522765	.	+	.	ID=gene1415;Dbxref=GeneID:1096852;Name=SC6D7.13c;gbkey=Gene;gene=SC6D7.13c;gene_biotype=protein_coding;gene_synonym=SC6D7.13c;locus_tag=SCO1426
NC_003888.3	RefSeq	CDS	1522328	1522765	.	+	0	ID=cds1391;Parent=gene1415;Dbxref=Genbank:NP_625708.1,GeneID:1096852;Name=NP_625708.1;Note=SC6D7.13c%2C unknown%2C len: 145 aa.;gbkey=CDS;gene=SC6D7.13c;product=hypothetical protein;protein_id=NP_625708.1;transl_table=11
NC_003888.3	RefSeq	gene	1522938	1523255	.	+	.	ID=gene1416;Dbxref=GeneID:1096853;Name=SC6D7.12c;gbkey=Gene;gene=SC6D7.12c;gene_biotype=protein_coding;gene_synonym=SC6D7.12c;locus_tag=SCO1427
NC_003888.3	RefSeq	CDS	1522938	1523255	.	+	0	ID=cds1392;Parent=gene1416;Dbxref=Genbank:NP_625709.1,GeneID:1096853;Name=NP_625709.1;Note=SC6D7.12c%2C unknown%2C len: 105 aa.;gbkey=CDS;gene=SC6D7.12c;product=hypothetical protein;protein_id=NP_625709.1;transl_table=11
NC_003888.3	RefSeq	gene	1523218	1524393	.	-	.	ID=gene1417;Dbxref=GeneID:1096854;Name=acd;gbkey=Gene;gene=acd;gene_biotype=protein_coding;gene_synonym=acd;locus_tag=SCO1428
NC_003888.3	RefSeq	CDS	1523218	1524393	.	-	0	ID=cds1393;Parent=gene1417;Dbxref=Genbank:NP_625710.1,GeneID:1096854;Name=NP_625710.1;Note=SC6D7.11%2C acd%2C acyl-CoA dehydrogenase (EC 1.3.99.-)%2C len: 391 aa. Highly similar to many Prokaryotic and eukaryotic acyl-CoA dehydrogenases including: Megasphaera elsdenii SW:ACDS_MEGEL(EMBL:L04528) acyl-CoA dehydrogenase%2C short-chain specific (EC 1.3.99.2) (383 aa)%2C fasta scores opt: 926 z-score: 1026.2 E():0 40.9%25 identity in 372 aa overlap and Homo sapiens (Human) SW:ACDS_HUMAN(EMBL:M26393) acyl-CoA dehydrogenase%2C short-chain precursor (EC 1.3.99.2) (412 aa%2C fasta scores opt: 924 z-score: 1023.5 E():0 41.2%25 identity in 376 aa overlap. Also similar to Streptomyces coelicolor TR:CAB46799(EMBL:AL096811) acyl-CoA dehydrogenase SCI30A.22C (383 aa)%2C fasta scores opt: 940 z-score: 1041.6 E(): 0 41.1%25 identity in 375 aa overlap. Contains a Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and a Prosite hit to PS00073 Acyl-CoA dehydrogenases signature 2.;gbkey=CDS;gene=acd;product=acyl-CoA dehydrogenase;protein_id=NP_625710.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1523245	1524351	.	-	.	ID=id1790;Dbxref=GeneID:1096854;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 492.50%2C E-value 3.2e-144;gbkey=misc_feature;gene=acd
NC_003888.3	RefSeq	sequence_feature	1523305	1523364	.	-	.	ID=id1791;Dbxref=GeneID:1096854;Note=PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=misc_feature;gene=acd
NC_003888.3	RefSeq	ribosome_entry_site	1524405	1524409	.	-	.	ID=id1792;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	1524638	1526248	.	+	.	ID=id1793;Note=region of previously sequenced DNA which is 100%25 identical%2C over 1611 bps%2C to EMBL:AB017011%2C encoding the Streptomyces coelicolor gene for ChiD.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1524785	1526038	.	+	.	ID=gene1418;Dbxref=GeneID:1096855;Name=chiD;gbkey=Gene;gene=chiD;gene_biotype=protein_coding;gene_synonym=chiD;locus_tag=SCO1429
NC_003888.3	RefSeq	CDS	1524785	1526038	.	+	0	ID=cds1394;Parent=gene1418;Dbxref=Genbank:NP_625711.1,GeneID:1096855;Name=NP_625711.1;Note=SC6D7.10%2C chiD%2C chitinase (hypothetical protein)%2C len: 417 aa. Previously sequenced and characterised TR:Q9Z9M7(EMBL:AB017011) fasta scores opt: 2877 z-score: 3125.2 E():0 100.0%25 identity in 417 aa overlap. Contains a Pfam match to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18 and a Prosite hit to PS01095 Chitinases family 18 active site. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=chiD;product=chitinase;protein_id=NP_625711.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1524941	1526002	.	+	.	ID=id1794;Dbxref=GeneID:1096855;Note=Pfam match to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18%2C score 485.70%2C E-value 5.3e-144;gbkey=misc_feature;gene=chiD
NC_003888.3	RefSeq	sequence_feature	1525343	1525369	.	+	.	ID=id1795;Dbxref=GeneID:1096855;Note=PS01095 Chitinases family 18 active site.;gbkey=misc_feature;gene=chiD
NC_003888.3	RefSeq	gene	1526117	1526779	.	-	.	ID=gene1419;Dbxref=GeneID:1096856;Name=SC6D7.09;gbkey=Gene;gene=SC6D7.09;gene_biotype=protein_coding;gene_synonym=SC6D7.09;locus_tag=SCO1430
NC_003888.3	RefSeq	CDS	1526117	1526779	.	-	0	ID=cds1395;Parent=gene1419;Dbxref=Genbank:NP_625712.1,GeneID:1096856;Name=NP_625712.1;Note=SC6D7.09%2C possible TetR-family transcriptional regulator%2C len: 220 aa. Weakly similar to several regulatory proteins e.g. Streptomyces coelicolor TR:CAB55659(EMBL:AL117385) tetR-family transcriptional regulator SC5G9.11C (197 aa)%2C fasta scores opt: 164 z-score: 201.8 E(): 0.00073 26.2%25 identity in 145 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 44..65 (+3.74 SD).;gbkey=CDS;gene=SC6D7.09;product=TetR family transcriptional regulator;protein_id=NP_625712.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1526561	1526701	.	-	.	ID=id1796;Dbxref=GeneID:1096856;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 29.00%2C E-value 2.5e-06;gbkey=misc_feature;gene=SC6D7.09
NC_003888.3	RefSeq	gene	1526862	1527104	.	-	.	ID=gene1420;Dbxref=GeneID:1096857;Name=SC6D7.08;gbkey=Gene;gene=SC6D7.08;gene_biotype=protein_coding;gene_synonym=SC6D7.08;locus_tag=SCO1431
NC_003888.3	RefSeq	CDS	1526862	1527104	.	-	0	ID=cds1396;Parent=gene1420;Dbxref=Genbank:NP_625713.1,GeneID:1096857;Name=NP_625713.1;Note=SC6D7.08%2C possible membrane protein%2C len: 80 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC6D7.08;product=hypothetical protein;protein_id=NP_625713.1;transl_table=11
NC_003888.3	RefSeq	gene	1527125	1528564	.	-	.	ID=gene1421;Dbxref=GeneID:1096858;Name=SC6D7.07;gbkey=Gene;gene=SC6D7.07;gene_biotype=protein_coding;gene_synonym=SC6D7.07;locus_tag=SCO1432
NC_003888.3	RefSeq	CDS	1527125	1528564	.	-	0	ID=cds1397;Parent=gene1421;Dbxref=Genbank:NP_625714.1,GeneID:1096858;Name=NP_625714.1;Note=SC6D7.07%2C possible membrane protein%2C len: 479 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC6D7.07;product=hypothetical protein;protein_id=NP_625714.1;transl_table=11
NC_003888.3	RefSeq	gene	1528839	1529303	.	+	.	ID=gene1422;Dbxref=GeneID:1096859;Name=SC6D7.06c;gbkey=Gene;gene=SC6D7.06c;gene_biotype=protein_coding;gene_synonym=SC6D7.06c;locus_tag=SCO1433
NC_003888.3	RefSeq	CDS	1528839	1529303	.	+	0	ID=cds1398;Parent=gene1422;Dbxref=Genbank:NP_625715.1,GeneID:1096859;Name=NP_625715.1;Note=SC6D7.06c%2C doubtful CDS%2C len: 154 aa.;gbkey=CDS;gene=SC6D7.06c;product=hypothetical protein;protein_id=NP_625715.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1529736	1529741	.	+	.	ID=id1797;gbkey=RBS
NC_003888.3	RefSeq	gene	1529751	1531607	.	+	.	ID=gene1423;Dbxref=GeneID:1096860;Name=SC6D7.05c;gbkey=Gene;gene=SC6D7.05c;gene_biotype=protein_coding;gene_synonym=SC6D7.05c;locus_tag=SCO1434
NC_003888.3	RefSeq	CDS	1529751	1531607	.	+	0	ID=cds1399;Parent=gene1423;Dbxref=Genbank:NP_625716.1,GeneID:1096860;Name=NP_625716.1;Note=SC6D7.05c%2C possible CbxX/CfqX family protein%2C len: 618 aa. Similar to several proteins of unknown function e.g. Mycobacterium tuberculosis TR:O69733(EMBL:AL022120) hypothetical 62.4 KD protein (573 aa)%2Cfasta scores opt: 751 z-score: 757.0 E():0 31.0%25 identity in 590 aa overlap. The C-terminus is similar to many proteins of the CbxX/CfqX family e.g. Bacillus subtilis SW:SP5K_BACSU(EMBL:X59412) stage V sporulation protein K (322 aa)%2C fasta scores opt: 645 z-score: 654.4 E(): 4.5e-29 39.6%25 identity in 280 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a TTA /leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SC6D7.05c;product=CbxX/CfqX family protein;protein_id=NP_625716.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1530246	1530248	.	+	.	ID=id1798;Dbxref=GeneID:1096860;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC6D7.05c
NC_003888.3	RefSeq	sequence_feature	1530894	1530917	.	+	.	ID=id1799;Dbxref=GeneID:1096860;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC6D7.05c
NC_003888.3	RefSeq	gene	1531792	1532835	.	-	.	ID=gene1424;Dbxref=GeneID:1096861;Name=SC6D7.04;gbkey=Gene;gene=SC6D7.04;gene_biotype=protein_coding;gene_synonym=SC6D7.04;locus_tag=SCO1435
NC_003888.3	RefSeq	CDS	1531792	1532835	.	-	0	ID=cds1400;Parent=gene1424;Dbxref=Genbank:NP_625717.1,GeneID:1096861;Name=NP_625717.1;Note=SC6D7.04%2C possible integral membrane protein%2C len: 347 aa. Highly similar to many proteins of unknown function including: Mycobacterium tuberculosis SW:YI41_MYCTU (EMBL:Z83859) hypothetical 36.7 KD protein (345 aa)%2C fasta scores opt: 884 z-score: 1036.1 E(): 0 43.8%25 identity in 349 aa overlap and Streptomyces coelicolor TR:CAB53285 (EMBL:AL109972) integral membrane protein SCJ9A.24C (339 aa)%2C fasta scores: opt: 705 z-score: 827.6 E():0 36.1%25 identity in 327 aa overlap. Also similar to the adjoining CDS SC6D7.03 (443 aa)%2C fasta scores: opt: 651 z-score: 666.6 E(): 8.9e-32 36.6%25 identity in 344 aa overlap. Contains a Pfam matches to entries PF01595 DUF21%2C Domain of unknown function and 2x Pfam match to entry PF00571 CBS%2C CBS domain. Also contains a possible N-terminal signal sequence and possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SC6D7.04;product=hypothetical protein;protein_id=NP_625717.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1531846	1532007	.	-	.	ID=id1800;Dbxref=GeneID:1096861;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 28.10%2C E-value 0.0002;gbkey=misc_feature;gene=SC6D7.04
NC_003888.3	RefSeq	sequence_feature	1532026	1532187	.	-	.	ID=id1801;Dbxref=GeneID:1096861;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 26.90%2C E-value 0.00047;gbkey=misc_feature;gene=SC6D7.04
NC_003888.3	RefSeq	sequence_feature	1532221	1532829	.	-	.	ID=id1802;Dbxref=GeneID:1096861;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function%2C score 187.10%2C E-value 2.9e-52;gbkey=misc_feature;gene=SC6D7.04
NC_003888.3	RefSeq	gene	1532832	1534163	.	-	.	ID=gene1425;Dbxref=GeneID:1096862;Name=SC6D7.03;gbkey=Gene;gene=SC6D7.03;gene_biotype=protein_coding;gene_synonym=SC6D7.03;locus_tag=SCO1436
NC_003888.3	RefSeq	CDS	1532832	1534163	.	-	0	ID=cds1401;Parent=gene1425;Dbxref=Genbank:NP_625718.1,GeneID:1096862;Name=NP_625718.1;Note=SC6D7.03%2C possible hypothetical protein%2C len: 443 aa. Highly similar to many proteins of unknown function including: Mycobacterium tuberculosis SW:Y0D3_MYCTU(EMBL:Z78020) hypothetical 36.7 KD protein (345 aa)%2C fasta scores opt: 1088 z-score: 1211.2 E():0 44.1%25 identity in 447 aa overlap and Streptomyces coelicolor TR:CAB53286(EMBL:AL109972)  integral membrane protein SCJ9A.25C (445 aa)%2C fast scores opt: 1023 z-score: 1139.2 E():0 42.4%25 identity in 429 aa overlap. Also similar to the adjoining CDS SC6D7.04 (347 aa)%2C fasta scores opt: 651 z-score: 585.4 E(): 3e-27 35.9%25 identity in 343 aa overlap. Contains a Pfam matches to entries PF01595 DUF21%2C Domain of unknown function and 2x Pfam match to entry PF00571 CBS%2C CBS domain. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6D7.03;product=hypothetical protein;protein_id=NP_625718.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1532843	1532847	.	-	.	ID=id1803;Dbxref=GeneID:1096862;gbkey=RBS;gene=SC6D7.03
NC_003888.3	RefSeq	sequence_feature	1533153	1533311	.	-	.	ID=id1804;Dbxref=GeneID:1096862;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 13.60%2C E-value 0.74;gbkey=misc_feature;gene=SC6D7.03
NC_003888.3	RefSeq	sequence_feature	1533336	1533500	.	-	.	ID=id1805;Dbxref=GeneID:1096862;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 34.70%2C E-value 2.1e-06;gbkey=misc_feature;gene=SC6D7.03
NC_003888.3	RefSeq	sequence_feature	1533534	1534151	.	-	.	ID=id1806;Dbxref=GeneID:1096862;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function%2C score 144.80%2C E-value 1.5e-39;gbkey=misc_feature;gene=SC6D7.03
NC_003888.3	RefSeq	sequence_feature	1534322	1534327	.	+	.	ID=id1807;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	1534322	1534327	.	-	.	ID=id1808;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1534368	1534838	.	-	.	ID=gene1426;Dbxref=GeneID:1096863;Name=SC6D7.02;gbkey=Gene;gene=SC6D7.02;gene_biotype=protein_coding;gene_synonym=SC6D7.02;locus_tag=SCO1437
NC_003888.3	RefSeq	CDS	1534368	1534838	.	-	0	ID=cds1402;Parent=gene1426;Dbxref=Genbank:NP_625719.1,GeneID:1096863;Name=NP_625719.1;Note=SC6D7.02%2C possible membrane protein%2C len: 156 aa. Weakly similar to a hypothetical protein from Mycobacterium tuberculosis: SW:YE17_MYCTU(EMBL:Z80108) (154 aa)%2C fasta scores opt: 212 z-score: 266.9 E(): 1.7e-07 32.4%25 identity in 136 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6D7.02;product=hypothetical protein;protein_id=NP_625719.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1534857	1534861	.	-	.	ID=id1809;gbkey=RBS
NC_003888.3	RefSeq	gene	1534876	1535733	.	-	.	ID=gene1427;Dbxref=GeneID:1096864;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;gene_synonym=SC6D7A.01c;locus_tag=SCO1438
NC_003888.3	RefSeq	CDS	1534876	1535733	.	-	0	ID=cds1403;Parent=gene1427;Dbxref=Genbank:NP_733534.1,GeneID:1096864;Name=NP_733534.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=NP_733534.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1535110	1535592	.	-	.	ID=id1810;Dbxref=GeneID:1096864;Note=Pfam match to entry PF01634 HisG%2C ATP phosphoribosyltransferase%2C score 178.00%2C E-value 1.5e-49;gbkey=misc_feature;gene=hisG
NC_003888.3	RefSeq	ribosome_entry_site	1535744	1535749	.	-	.	ID=id1811;gbkey=RBS
NC_003888.3	RefSeq	gene	1535782	1536054	.	-	.	ID=gene1428;Dbxref=GeneID:1096865;Name=hisE;gbkey=Gene;gene=hisE;gene_biotype=protein_coding;gene_synonym=SC6D7A.02c;locus_tag=SCO1439
NC_003888.3	RefSeq	CDS	1535782	1536054	.	-	0	ID=cds1404;Parent=gene1428;Dbxref=Genbank:NP_625720.1,GeneID:1096865;Name=NP_625720.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis;gbkey=CDS;gene=hisE;product=phosphoribosyl-ATP pyrophosphatase;protein_id=NP_625720.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1535785	1536039	.	-	.	ID=id1812;Dbxref=GeneID:1096865;Note=Pfam match to entry PF01503 PRA-PH%2C Phosphoribosyl-ATP pyrophosphohydrolase%2C score 34.50%2C E-value 2.4e-06;gbkey=misc_feature;gene=hisE
NC_003888.3	RefSeq	gene	1536089	1536574	.	-	.	ID=gene1429;Dbxref=GeneID:1096866;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;gene_synonym=SC6D7A.03c;locus_tag=SCO1440
NC_003888.3	RefSeq	CDS	1536089	1536574	.	-	0	ID=cds1405;Parent=gene1429;Dbxref=Genbank:NP_625721.1,GeneID:1096866;Name=NP_625721.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=NP_625721.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1536107	1536535	.	-	.	ID=id1813;Dbxref=GeneID:1096866;Note=Pfam match to entry PF00885 DMRL_synthase%2C 6%2C7-dimethyl-8-ribityllumazine synthase%2C score 229.70%2C E-value 4.3e-65;gbkey=misc_feature;gene=ribH
NC_003888.3	RefSeq	ribosome_entry_site	1536579	1536583	.	-	.	ID=id1814;gbkey=RBS
NC_003888.3	RefSeq	gene	1536596	1537885	.	-	.	ID=gene1430;Dbxref=GeneID:1096867;Name=ribAB;gbkey=Gene;gene=ribAB;gene_biotype=protein_coding;gene_synonym=ribAB,SC6D7A.04c;locus_tag=SCO1441
NC_003888.3	RefSeq	CDS	1536596	1537885	.	-	0	ID=cds1406;Parent=gene1430;Dbxref=Genbank:NP_625722.1,GeneID:1096867;Name=NP_625722.1;Note=bifunctional enzyme DHBP synthase/GTP cyclohydrolase II%3B functions in riboflavin synthesis%3B converts GTP to 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine%3B converts ribulose 5-phopshate to 3%2C4-dihydroxy-2-butanone 4-phosphate;gbkey=CDS;gene=ribAB;product=bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein;protein_id=NP_625722.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1536710	1537225	.	-	.	ID=id1815;Dbxref=GeneID:1096867;Note=Pfam match to entry PF00925 GTP_cyclohydro2%2C GTP cyclohydrolase II%2C score 372.20%2C E-value 5.3e-108;gbkey=misc_feature;gene=ribAB
NC_003888.3	RefSeq	sequence_feature	1537232	1537825	.	-	.	ID=id1816;Dbxref=GeneID:1096867;Note=Pfam match to entry PF00926 DHBP_synthase%2C 3%2C4-dihydroxy-2-butanone 4-phosphate synthase%2C score 405.10%2C E-value 6.7e-118;gbkey=misc_feature;gene=ribAB
NC_003888.3	RefSeq	gene	1537882	1538526	.	-	.	ID=gene1431;Dbxref=GeneID:1096868;Name=SC6D7A.05c;gbkey=Gene;gene=SC6D7A.05c;gene_biotype=protein_coding;gene_synonym=SC6D7A.05c;locus_tag=SCO1442
NC_003888.3	RefSeq	CDS	1537882	1538526	.	-	0	ID=cds1407;Parent=gene1431;Dbxref=Genbank:NP_625723.1,GeneID:1096868;Name=NP_625723.1;Note=SC6D7A.05c%2C possible integral membrane protein%2C len: 214 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6D7A.05c;product=hypothetical protein;protein_id=NP_625723.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1537893	1537898	.	-	.	ID=id1817;Dbxref=GeneID:1096868;gbkey=RBS;gene=SC6D7A.05c
NC_003888.3	RefSeq	gene	1538523	1539125	.	-	.	ID=gene1432;Dbxref=GeneID:1096869;Name=SC6D7A.06c;gbkey=Gene;gene=SC6D7A.06c;gene_biotype=protein_coding;gene_synonym=SC6D7A.06c;locus_tag=SCO1443
NC_003888.3	RefSeq	CDS	1538523	1539125	.	-	0	ID=cds1408;Parent=gene1432;Dbxref=Genbank:NP_625724.1,GeneID:1096869;Name=NP_625724.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;gene=SC6D7A.06c;product=riboflavin synthase subunit alpha;protein_id=NP_625724.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1538533	1538536	.	-	.	ID=id1818;Dbxref=GeneID:1096869;gbkey=RBS;gene=SC6D7A.06c
NC_003888.3	RefSeq	sequence_feature	1538577	1538831	.	-	.	ID=id1819;Dbxref=GeneID:1096869;Note=Pfam match to entry PF00677 Lum_binding%2C Lumazine binding domain%2C score 109.20%2C E-value 8e-29;gbkey=misc_feature;gene=SC6D7A.06c
NC_003888.3	RefSeq	sequence_feature	1538868	1539119	.	-	.	ID=id1820;Dbxref=GeneID:1096869;Note=Pfam match to entry PF00677 Lum_binding%2C Lumazine binding domain%2C score 88.40%2C E-value 1.4e-22;gbkey=misc_feature;gene=SC6D7A.06c
NC_003888.3	RefSeq	sequence_feature	1538874	1538912	.	-	.	ID=id1821;Dbxref=GeneID:1096869;Note=PS00693 Riboflavin synthase alpha chain family signature;gbkey=misc_feature;gene=SC6D7A.06c
NC_003888.3	RefSeq	ribosome_entry_site	1539135	1539141	.	-	.	ID=id1822;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1539595	1539600	.	+	.	ID=id1823;gbkey=RBS
NC_003888.3	RefSeq	gene	1539609	1541984	.	+	.	ID=gene1433;Dbxref=GeneID:1096870;Name=SCL6.01;gbkey=Gene;gene=SCL6.01;gene_biotype=protein_coding;gene_synonym=SCL6.01;locus_tag=SCO1444
NC_003888.3	RefSeq	CDS	1539609	1541984	.	+	0	ID=cds1409;Parent=gene1433;Dbxref=Genbank:NP_625725.1,GeneID:1096870;Name=NP_625725.1;Note=SCL6.01%2C probable chitinase precursor%2C len: 791 aa%3B similar to TR:CAB62382 (EMBL:AJ250585) Arthrobacter sp chitinase precursor (EC 3.2.1.14) ChitIA%2C 880 aa%3B fasta scores: opt: 2788 z-score: 2817.6 E(): 0%3B 56.3%25 identity in 764 aa overlap and to SW:CHID_VIBFU (EMBL:U41418) Vibrio furnissii chitodextrinase precursor (EC 3.2.1.14) EndoI%2C 1046 aa%3B fasta scores: opt: 2055 z-score: 2075.7 E(): 0%3B 53.8%25 identity in 746 aa overlap. Contains three Pfam matches to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18 and match to Prosite entry PS01095 Chitinases family 18 active site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCL6.01;product=chitinase;protein_id=NP_625725.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1539840	1539971	.	+	.	ID=id1824;Dbxref=GeneID:1096870;Note=Pfam match to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18%2C score 29.30%2C E-value 4e-08;gbkey=misc_feature;gene=SCL6.01
NC_003888.3	RefSeq	sequence_feature	1540062	1540622	.	+	.	ID=id1825;Dbxref=GeneID:1096870;Note=Pfam match to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18%2C score 149.50%2C E-value 6.7e-44;gbkey=misc_feature;gene=SCL6.01
NC_003888.3	RefSeq	sequence_feature	1540296	1540322	.	+	.	ID=id1826;Dbxref=GeneID:1096870;Note=PS01095 Chitinases family 18 active site;gbkey=misc_feature;gene=SCL6.01
NC_003888.3	RefSeq	sequence_feature	1541040	1541201	.	+	.	ID=id1827;Dbxref=GeneID:1096870;Note=Pfam match to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18%2C score 45.00%2C E-value 8.5e-13;gbkey=misc_feature;gene=SCL6.01
NC_003888.3	RefSeq	gene	1542226	1542993	.	+	.	ID=gene1434;Dbxref=GeneID:1096871;Name=SCL6.02;gbkey=Gene;gene=SCL6.02;gene_biotype=protein_coding;gene_synonym=SCL6.02;locus_tag=SCO1445
NC_003888.3	RefSeq	CDS	1542226	1542993	.	+	0	ID=cds1410;Parent=gene1434;Dbxref=Genbank:NP_625726.1,GeneID:1096871;Name=NP_625726.1;Note=SCL6.02%2C hypothetical protein%2C len: aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB52958 (EMBL:AL109950) Streptomyces coelicolor hypothetical 25.2 kD protein%2C SCJ4.24c%2C 242 aa%3B fasta scores: opt: 424 z-score: 482.7 E(): 1.8e-19%3B 39.9%25 identity in 218 aa overlap and to TR:Q9EWF2 (EMBL:AL451182) Streptomyces coelicolor hypothetical protein SCK13.32c%2C 263 aa%3B fasta scores: opt: 711 Z-score: 779.3 E(): 8.9e-36%3B 49.407%25 identity in 253 aa overlap;gbkey=CDS;gene=SCL6.02;product=hypothetical protein;protein_id=NP_625726.1;transl_table=11
NC_003888.3	RefSeq	gene	1543064	1543432	.	+	.	ID=gene1435;Dbxref=GeneID:1096872;Name=SCL6.03;gbkey=Gene;gene=SCL6.03;gene_biotype=protein_coding;gene_synonym=SCL6.03;locus_tag=SCO1446
NC_003888.3	RefSeq	CDS	1543064	1543432	.	+	0	ID=cds1411;Parent=gene1435;Dbxref=Genbank:NP_625727.1,GeneID:1096872;Name=NP_625727.1;Note=SCL6.03%2C possible integral membrane protein%2C len: 122 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL6.03;product=hypothetical protein;protein_id=NP_625727.1;transl_table=11
NC_003888.3	RefSeq	gene	1543454	1544653	.	-	.	ID=gene1436;Dbxref=GeneID:1096873;Name=SCL6.04c;gbkey=Gene;gene=SCL6.04c;gene_biotype=protein_coding;gene_synonym=SCL6.04c;locus_tag=SCO1447
NC_003888.3	RefSeq	CDS	1543454	1544653	.	-	0	ID=cds1412;Parent=gene1436;Dbxref=Genbank:NP_625728.1,GeneID:1096873;Name=NP_625728.1;Note=SCL6.04c%2C possible ROK-family transcriptional regulatory protein%2C len: 399 aa%3B similar to TR:CAB71832 (EMBL:AL138662) Streptomyces coelicolor ROK-family regulatory protein SC8E4A.27%2C 409 aa%3B fasta scores: opt: 938 z-score: 965.1 E(): 0%3B 42.5%25 identity in 398 aa overlap and to SW:XYLR_ANATH (EMBL:Z69782) Anaerocellum thermophilum xylose repressor XylR%2C 399 aa%3B fasta scores: opt: 327 z-score: 341.8 E(): 1.3e-1%3B 22.2%25 identity in 397 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family and possible helix-turn-helix motif at residues 26..47 (+2.84 SD);gbkey=CDS;gene=SCL6.04c;product=transcriptional regulator;protein_id=NP_625728.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1543934	1544104	.	-	.	ID=id1828;Dbxref=GeneID:1096873;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 45.80%2C E-value 1.5e-12;gbkey=misc_feature;gene=SCL6.04c
NC_003888.3	RefSeq	ribosome_entry_site	1544662	1544667	.	-	.	ID=id1829;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1544753	1544757	.	+	.	ID=id1830;gbkey=RBS
NC_003888.3	RefSeq	gene	1544766	1545977	.	+	.	ID=gene1437;Dbxref=GeneID:1096874;Name=SCL6.05;gbkey=Gene;gene=SCL6.05;gene_biotype=protein_coding;gene_synonym=SCL6.05;locus_tag=SCO1448
NC_003888.3	RefSeq	CDS	1544766	1545977	.	+	0	ID=cds1413;Parent=gene1437;Dbxref=Genbank:NP_625729.1,GeneID:1096874;Name=NP_625729.1;Note=SCL6.05%2C probable transport protein%2C len: 403 aa%3B similar to TR:AAF12043 (EMBL:AE002079) Deinococcus radiodurans transport protein%2C DR2502%2C 471 aa%3B fasta scores: opt: 687 z-score: 761.8 E(): 0%3B 39.0%25 identity in 359 aa overlap and to SW:MOSC_RHIME (EMBL:L17071) Rhizobium meliloti membrane protein MosC%2C 407 aa%3B fasta scores: opt: 496 z-score: 552.3 E(): 2.4e-23%3B 31.0%25 identity in 378 aa overlap. Contains match to Prosite entry PS00217 Sugar transport proteins signature 2. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL6.05;product=transporter;protein_id=NP_625729.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1545093	1545170	.	+	.	ID=id1831;Dbxref=GeneID:1096874;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=SCL6.05
NC_003888.3	RefSeq	gene	1545937	1546395	.	-	.	ID=gene1438;Dbxref=GeneID:1096875;Name=SCL6.06c;gbkey=Gene;gene=SCL6.06c;gene_biotype=protein_coding;gene_synonym=SCL6.06c;locus_tag=SCO1449
NC_003888.3	RefSeq	CDS	1545937	1546395	.	-	0	ID=cds1414;Parent=gene1438;Dbxref=Genbank:NP_625730.1,GeneID:1096875;Name=NP_625730.1;Note=SCL6.06c%2C hypothetical protein%2C len: 152 aa%3B similar to SW:YBGC_ECOLI (EMBL:M16489) Escherichia coli hypothetical 15.6 kD protein in CydB-TolQ intergenic region YbgC%2C 134 aa%3B fasta scores: opt: 140 z-score: 193.8 E(): 0.0023%3B 26.7%25 identity in 116 aa overlap;gbkey=CDS;gene=SCL6.06c;product=hypothetical protein;protein_id=NP_625730.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1546404	1546407	.	-	.	ID=id1832;gbkey=RBS
NC_003888.3	RefSeq	gene	1546564	1548000	.	+	.	ID=gene1439;Dbxref=GeneID:1096876;Name=SCL6.07;gbkey=Gene;gene=SCL6.07;gene_biotype=protein_coding;gene_synonym=SCL6.07;locus_tag=SCO1450
NC_003888.3	RefSeq	CDS	1546564	1548000	.	+	0	ID=cds1415;Parent=gene1439;Dbxref=Genbank:NP_625731.1,GeneID:1096876;Name=NP_625731.1;Note=SCL6.07%2C probable uracyl permease%2C len: 478 aa%3B similar to TR:BAA35783 (EMBL:D90738) Escherichia coli uracil transport protein PyrP%2C 442 aa%3B fasta scores: opt: 908 z-score: 949.9 E(): 0%3B 43.1%25 identity in 429 aa overlap and to SW:PYRP_BACCL (EMBL:X76083) Bacillus caldolyticus uracil permease (uracil transporter) PyrP%2C 432 aa%3B fasta scores: opt: 770 z-score: 806.6 E(): 0%3B 33.0%25 identity in 437 aa overlap. Contains Pfam match to entry PF00860 xan_ur_permease%2C Xanthine/uracil permeases family. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL6.07;product=uracyl permease;protein_id=NP_625731.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1546654	1547793	.	+	.	ID=id1833;Dbxref=GeneID:1096876;Note=Pfam match to entry PF00860 xan_ur_permease%2C Xanthine/uracil permeases family%2C score 225.40%2C E-value 8.5e-64;gbkey=misc_feature;gene=SCL6.07
NC_003888.3	RefSeq	gene	1547982	1549133	.	-	.	ID=gene1440;Dbxref=GeneID:1096877;Name=SCL6.08c;gbkey=Gene;gene=SCL6.08c;gene_biotype=protein_coding;gene_synonym=SCL6.08c;locus_tag=SCO1451
NC_003888.3	RefSeq	CDS	1547982	1549133	.	-	0	ID=cds1416;Parent=gene1440;Dbxref=Genbank:NP_625732.1,GeneID:1096877;Name=NP_625732.1;Note=SCL6.08c%2C probable endoglucanase precursor%2C len: 383 aa%3B similar to SW:GUN1_STRSQ (EMBL:L03218) Streptomyces sp. endoglucanase 1 precursor (EC 3.2.1.4) CasA%2C 359 aa%3B fasta scores: opt: 1042 z-score: 1000.3 E(): 0%3B 50.6%25 identity in 324 aa overlap. Contains Pfam match to entry PF01341 Glyco_hydro_6%2C Glycosyl hydrolases family 6 and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCL6.08c;product=endoglucanase;protein_id=NP_625732.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1547994	1548830	.	-	.	ID=id1834;Dbxref=GeneID:1096877;Note=Pfam match to entry PF01341 Glyco_hydro_6%2C Glycosyl hydrolases family 6%2C score 355.80%2C E-value 4.7e-103;gbkey=misc_feature;gene=SCL6.08c
NC_003888.3	RefSeq	gene	1549307	1550002	.	+	.	ID=gene1441;Dbxref=GeneID:1096878;Name=SCL6.09;gbkey=Gene;gene=SCL6.09;gene_biotype=protein_coding;gene_synonym=SCL6.09;locus_tag=SCO1452
NC_003888.3	RefSeq	CDS	1549307	1550002	.	+	0	ID=cds1417;Parent=gene1441;Dbxref=Genbank:NP_625733.1,GeneID:1096878;Name=NP_625733.1;Note=SCL6.09%2C unknown%2C len: 231 aa;gbkey=CDS;gene=SCL6.09;product=hypothetical protein;protein_id=NP_625733.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1550011	1550039	.	+	.	ID=id1835;Note=degenerate repeat 3x(C/T)TCCCG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	1550064	1550089	.	+	.	ID=id1836;Note=degenerate repeat 3x(A/G)TGGG(C/G);gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	1550121	1550124	.	+	.	ID=id1837;gbkey=RBS
NC_003888.3	RefSeq	gene	1550134	1551066	.	+	.	ID=gene1442;Dbxref=GeneID:1096879;Name=SCL6.10;gbkey=Gene;gene=SCL6.10;gene_biotype=protein_coding;gene_synonym=SCL6.10;locus_tag=SCO1453
NC_003888.3	RefSeq	CDS	1550134	1551066	.	+	0	ID=cds1418;Parent=gene1442;Dbxref=Genbank:NP_625734.1,GeneID:1096879;Name=NP_625734.1;Note=SCL6.10%2C conserved hypothetical protein%2C len: 310 aa%3B similar to various hypothetical proteins%2C e.g. SW:Y953_MYCTU (EMBL:Z79700) Mycobacterium tuberculosis hypothetical 30.9 kD protein RV0953c%2C 282 aa%3B fasta scores: opt: 405 z-score: 467.1 E(): 1.4e-18%3B 33.6%25 identity in 265 aa overlap;gbkey=CDS;gene=SCL6.10;product=hypothetical protein;protein_id=NP_625734.1;transl_table=11
NC_003888.3	RefSeq	gene	1551086	1552783	.	-	.	ID=gene1443;Dbxref=GeneID:1096880;Name=SCL6.11c;gbkey=Gene;gene=SCL6.11c;gene_biotype=protein_coding;gene_synonym=SCL6.11c;locus_tag=SCO1454
NC_003888.3	RefSeq	CDS	1551086	1552783	.	-	0	ID=cds1419;Parent=gene1443;Dbxref=Genbank:NP_625735.1,GeneID:1096880;Name=NP_625735.1;Note=SCL6.11c%2C possible amino oxidase%2C len: 565 aa%3B similar to C-terminal region of SW:TR2M_AGRVI (EMBL:M91609) Agrobacterium vitis tryptophan 2-monooxygenase (EC 1.13.12.3) IaaM (auxins biosynthesis)%2C 723 aa%3B fasta scores: opt: 617 z-score: 725.3 E(): 5.6e-33%3B 30.9%25 identity in 557 aa overlap. Contains Pfam match to entry PF01593 Amino_oxidase%2C Flavin containing amine oxidase;gbkey=CDS;gene=SCL6.11c;product=amino oxidase;protein_id=NP_625735.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1551176	1552609	.	-	.	ID=id1838;Dbxref=GeneID:1096880;Note=Pfam match to entry PF01593 Amino_oxidase%2C Flavin containing amine oxidase%2C score 126.10%2C E-value 6.5e-34;gbkey=misc_feature;gene=SCL6.11c
NC_003888.3	RefSeq	ribosome_entry_site	1552794	1552797	.	-	.	ID=id1839;gbkey=RBS
NC_003888.3	RefSeq	gene	1552848	1553636	.	-	.	ID=gene1444;Dbxref=GeneID:1096881;Name=SCL6.12c;gbkey=Gene;gene=SCL6.12c;gene_biotype=protein_coding;gene_synonym=SCL6.12c;locus_tag=SCO1455
NC_003888.3	RefSeq	CDS	1552848	1553636	.	-	0	ID=cds1420;Parent=gene1444;Dbxref=Genbank:NP_625736.1,GeneID:1096881;Name=NP_625736.1;Note=SCL6.12c%2C possible hydrolase%2C len: 262 aa%3B similar to TR:O69808 (EMBL:AL023496) Streptomyces coelicolor hydrolase SC1A6.03%2C 280 aa%3B fasta scores: opt: 389 z-score: 454.5 E(): 6.8e-18%3B 31.2%25 identity in 276 aa overlap. Contains Pfam match to entry PF00795 CN_hydrolase%2C Carbon-nitrogen hydrolase and match to Prosite entry PS01227 Uncharacterized protein family UPF0012 signature;gbkey=CDS;gene=SCL6.12c;product=hydrolase;protein_id=NP_625736.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1552863	1553636	.	-	.	ID=id1840;Dbxref=GeneID:1096881;Note=Pfam match to entry PF00795 CN_hydrolase%2C Carbon-nitrogen hydrolase%2C score 189.40%2C E-value 5.6e-53;gbkey=misc_feature;gene=SCL6.12c
NC_003888.3	RefSeq	sequence_feature	1553157	1553219	.	-	.	ID=id1841;Dbxref=GeneID:1096881;Note=PS01227 Uncharacterized protein family UPF0012 signature;gbkey=misc_feature;gene=SCL6.12c
NC_003888.3	RefSeq	ribosome_entry_site	1553644	1553647	.	-	.	ID=id1842;gbkey=RBS
NC_003888.3	RefSeq	gene	1553815	1554174	.	-	.	ID=gene1445;Dbxref=GeneID:1096882;Name=SCL6.13c;gbkey=Gene;gene=SCL6.13c;gene_biotype=protein_coding;gene_synonym=SCL6.13c;locus_tag=SCO1456
NC_003888.3	RefSeq	CDS	1553815	1554174	.	-	0	ID=cds1421;Parent=gene1445;Dbxref=Genbank:NP_625737.1,GeneID:1096882;Name=NP_625737.1;Note=SCL6.13c%2C unknown%2C len: 119 aa;gbkey=CDS;gene=SCL6.13c;product=hypothetical protein;protein_id=NP_625737.1;transl_table=11
NC_003888.3	RefSeq	gene	1554266	1555507	.	-	.	ID=gene1446;Dbxref=GeneID:1096883;Name=SCL6.14c;gbkey=Gene;gene=SCL6.14c;gene_biotype=protein_coding;gene_synonym=SCL6.14c;locus_tag=SCO1457
NC_003888.3	RefSeq	CDS	1554266	1555507	.	-	0	ID=cds1422;Parent=gene1446;Dbxref=Genbank:NP_625738.1,GeneID:1096883;Name=NP_625738.1;Note=SCL6.14c%2C probable transport protein%2C len: 413 aa%3B similar to SW:MALA_BACST (EMBL:L13418) Bacillus stearothermophilus maltose permease MalA%2C 394 aa%3B fasta scores: opt: 221 z-score: 243.2 E(): 4e-06%3B 28.4%25 identity in 391 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL6.14c;product=transporter;protein_id=NP_625738.1;transl_table=11
NC_003888.3	RefSeq	gene	1555656	1556108	.	-	.	ID=gene1447;Dbxref=GeneID:1096884;Name=SCL6.15c;gbkey=Gene;gene=SCL6.15c;gene_biotype=protein_coding;gene_synonym=SCL6.15c;locus_tag=SCO1458
NC_003888.3	RefSeq	CDS	1555656	1556108	.	-	0	ID=cds1423;Parent=gene1447;Dbxref=Genbank:NP_625739.1,GeneID:1096884;Name=NP_625739.1;Note=SCL6.15c%2C probable asnC-family regulatory protein%2C len: 150 aa%3B similar to SW:ASNC_HAEIN (EMBL:U32738) Haemophilus influenzae regulatory protein AsnC%2C 150 aa%3B fasta scores: opt: 229 z-score: 298.6 E(): 3.3e-09%3B 28.0%25 identity in 143 aa overlap. Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family and match ot Prostie entry PS00519 Bacterial regulatory proteins%2C asnC family signature and possible helix-turn-helix motif at residues 19..40 (+3.26 SD);gbkey=CDS;gene=SCL6.15c;product=transcription regulator AsnC;protein_id=NP_625739.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1555731	1556033	.	-	.	ID=id1843;Dbxref=GeneID:1096884;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 51.70%2C E-value 1.6e-11;gbkey=misc_feature;gene=SCL6.15c
NC_003888.3	RefSeq	sequence_feature	1555971	1556051	.	-	.	ID=id1844;Dbxref=GeneID:1096884;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature;gbkey=misc_feature;gene=SCL6.15c
NC_003888.3	RefSeq	gene	1556124	1557614	.	-	.	ID=gene1448;Dbxref=GeneID:1096885;Name=SCL6.16c;gbkey=Gene;gene=SCL6.16c;gene_biotype=protein_coding;gene_synonym=SCL6.16c;locus_tag=SCO1459
NC_003888.3	RefSeq	CDS	1556124	1557614	.	-	0	ID=cds1424;Parent=gene1448;Dbxref=Genbank:NP_625740.1,GeneID:1096885;Name=NP_625740.1;Note=SCL6.16c%2C possible amino acid transporter%2C len: 496 aa%3B similar to TR:CAB63187 (EMBL:AL133469) Streptomyces coelicolor amino acid transporter SCM10.26%2C 468 aa%3B fasta scores: opt: 1245 z-score: 1366.2 E(): 0%3B 44.7%25 identity in 463 aa overlap. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL6.16c;product=amino acid transporter;protein_id=NP_625740.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1556172	1557479	.	-	.	ID=id1845;Dbxref=GeneID:1096885;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -34.40%2C E-value 2.7e-11;gbkey=misc_feature;gene=SCL6.16c
NC_003888.3	RefSeq	ribosome_entry_site	1557622	1557626	.	-	.	ID=id1846;gbkey=RBS
NC_003888.3	RefSeq	gene	1557912	1558307	.	-	.	ID=gene1449;Dbxref=GeneID:1096886;Name=SCL6.17c;gbkey=Gene;gene=SCL6.17c;gene_biotype=protein_coding;gene_synonym=SCL6.17c;locus_tag=SCO1460
NC_003888.3	RefSeq	CDS	1557912	1558307	.	-	0	ID=cds1425;Parent=gene1449;Dbxref=Genbank:NP_625741.1,GeneID:1096886;Name=NP_625741.1;Note=SCL6.17c%2C unknown%2C len: 131 aa;gbkey=CDS;gene=SCL6.17c;product=hypothetical protein;protein_id=NP_625741.1;transl_table=11
NC_003888.3	RefSeq	gene	1558380	1559831	.	-	.	ID=gene1450;Dbxref=GeneID:1096887;Name=guaB2;gbkey=Gene;gene=guaB2;gene_biotype=protein_coding;gene_synonym=guaB2,SCL6.18c;locus_tag=SCO1461
NC_003888.3	RefSeq	CDS	1558380	1559831	.	-	0	ID=cds1426;Parent=gene1450;Dbxref=Genbank:NP_625742.1,GeneID:1096887;Name=NP_625742.1;Note=catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate;gbkey=CDS;gene=guaB2;product=inosine 5-monophosphate dehydrogenase;protein_id=NP_625742.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1558446	1559123	.	-	.	ID=id1847;Dbxref=GeneID:1096887;Note=Pfam match to entry PF00478 IMPDH_C%2C IMP dehydrogenase / GMP reductase C terminus%2C score 256.70%2C E-value 3.1e-73;gbkey=misc_feature;gene=guaB2
NC_003888.3	RefSeq	sequence_feature	1559208	1559369	.	-	.	ID=id1848;Dbxref=GeneID:1096887;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 25.50%2C E-value 0.0012;gbkey=misc_feature;gene=guaB2
NC_003888.3	RefSeq	sequence_feature	1559385	1559546	.	-	.	ID=id1849;Dbxref=GeneID:1096887;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 34.00%2C E-value 3.5e-06;gbkey=misc_feature;gene=guaB2
NC_003888.3	RefSeq	sequence_feature	1559547	1559813	.	-	.	ID=id1850;Dbxref=GeneID:1096887;Note=Pfam match to entry PF01574 IMPDH_N%2C IMP dehydrogenase / GMP reductase N terminus%2C score 23.50%2C E-value 3.5e-06;gbkey=misc_feature;gene=guaB2
NC_003888.3	RefSeq	gene	1559931	1560284	.	-	.	ID=gene1451;Dbxref=GeneID:1096888;Name=SCL6.19c;gbkey=Gene;gene=SCL6.19c;gene_biotype=protein_coding;gene_synonym=SCL6.19c;locus_tag=SCO1462
NC_003888.3	RefSeq	CDS	1559931	1560284	.	-	0	ID=cds1427;Parent=gene1451;Dbxref=Genbank:NP_625743.1,GeneID:1096888;Name=NP_625743.1;Note=SCL6.19c%2C unknown%2C len: 117 aa;gbkey=CDS;gene=SCL6.19c;product=hypothetical protein;protein_id=NP_625743.1;transl_table=11
NC_003888.3	RefSeq	gene	1560350	1561432	.	-	.	ID=gene1452;Dbxref=GeneID:1096889;Name=SCL6.20c;gbkey=Gene;gene=SCL6.20c;gene_biotype=protein_coding;gene_synonym=SCL6.20c;locus_tag=SCO1463
NC_003888.3	RefSeq	CDS	1560350	1561432	.	-	0	ID=cds1428;Parent=gene1452;Dbxref=Genbank:NP_625744.1,GeneID:1096889;Name=NP_625744.1;Note=SCL6.20c%2C probable transcriptional regulator%2C len: 360 aa%3B similar to SW:DEOR_BACSU (EMBL:X82174) Bacillus subtilis deoxyribonucleoside regulator DeoR%2C 313 aa %3Bfasta scores: opt: 363 z-score: 408.8 E(): 2.4e-15%3B 28.0%25 identity in 307 aa overlap. Contains possible helix-turn-helix motif at residues 54..75 (+4.15 SD);gbkey=CDS;gene=SCL6.20c;product=transcriptional regulator;protein_id=NP_625744.1;transl_table=11
NC_003888.3	RefSeq	gene	1561471	1562157	.	-	.	ID=gene1453;Dbxref=GeneID:1096890;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;gene_synonym=rpe,SCL6.21c;locus_tag=SCO1464
NC_003888.3	RefSeq	CDS	1561471	1562157	.	-	0	ID=cds1429;Parent=gene1453;Dbxref=Genbank:NP_625745.1,GeneID:1096890;Name=NP_625745.1;Note=catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate;gbkey=CDS;gene=rpe;product=ribulose-phosphate 3-epimerase;protein_id=NP_625745.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1561552	1562148	.	-	.	ID=id1851;Dbxref=GeneID:1096890;Note=Pfam match to entry PF00834 Ribul_P_3_epim%2C Ribulose-phosphate 3 epimerase family%2C score 392.00%2C E-value 5.9e-114;gbkey=misc_feature;gene=rpe
NC_003888.3	RefSeq	sequence_feature	1561696	1561764	.	-	.	ID=id1852;Dbxref=GeneID:1096890;Note=PS01086 Ribulose-phosphate 3-epimerase family signature 2;gbkey=misc_feature;gene=rpe
NC_003888.3	RefSeq	sequence_feature	1562026	1562070	.	-	.	ID=id1853;Dbxref=GeneID:1096890;Note=PS01085 Ribulose-phosphate 3-epimerase family signature 1;gbkey=misc_feature;gene=rpe
NC_003888.3	RefSeq	gene	1562315	1563520	.	-	.	ID=gene1454;Dbxref=GeneID:1096891;Name=SCL6.22c;gbkey=Gene;gene=SCL6.22c;gene_biotype=protein_coding;gene_synonym=SCL6.22c;locus_tag=SCO1465
NC_003888.3	RefSeq	CDS	1562315	1563520	.	-	0	ID=cds1430;Parent=gene1454;Dbxref=Genbank:NP_625746.1,GeneID:1096891;Name=NP_625746.1;Note=SCL6.22c%2C possible hypothetical protein%2C len: 401 aa%3B similar to TR:Q55471 (EMBL:D64006) Synechocystis sp. hypothetical 46.5 kD protein%2C 421 aa%3B fasta scores: opt: 240 z-score: 260.1 E(): 4.6e-07%3B 28.8%25 identity in 385 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCL6.22c;product=hypothetical protein;protein_id=NP_625746.1;transl_table=11
NC_003888.3	RefSeq	gene	1563517	1564455	.	-	.	ID=gene1455;Dbxref=GeneID:1096892;Name=SCL6.23c;gbkey=Gene;gene=SCL6.23c;gene_biotype=protein_coding;gene_synonym=SCL6.23c;locus_tag=SCO1466
NC_003888.3	RefSeq	CDS	1563517	1564455	.	-	0	ID=cds1431;Parent=gene1455;Dbxref=Genbank:NP_625747.1,GeneID:1096892;Name=NP_625747.1;Note=SCL6.23c%2C possible integral membrane protein%2C len: 312 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL6.23c;product=hypothetical protein;protein_id=NP_625747.1;transl_table=11
NC_003888.3	RefSeq	gene	1564452	1565927	.	-	.	ID=gene1456;Dbxref=GeneID:1096893;Name=SCL6.24c;gbkey=Gene;gene=SCL6.24c;gene_biotype=protein_coding;gene_synonym=SCL6.24c;locus_tag=SCO1467
NC_003888.3	RefSeq	CDS	1564452	1565927	.	-	0	ID=cds1432;Parent=gene1456;Dbxref=Genbank:NP_625748.1,GeneID:1096893;Name=NP_625748.1;Note=SCL6.24c%2C hypothetical protein%2C len: 491 aa%3B similar to TR:CAB71206 (EMBL:AL138538) Streptomyces coelicolor hypothetical 47.0 kD protein SC6D10.11%2C 452 aa%3B fasta scores: opt: 835 z-score: 861.3 E(): 0%3B 37.6%25 identity in 434 aa overlap;gbkey=CDS;gene=SCL6.24c;product=hypothetical protein;protein_id=NP_625748.1;transl_table=11
NC_003888.3	RefSeq	gene	1565986	1568310	.	-	.	ID=gene1457;Dbxref=GeneID:1096894;Name=SCL6.25c;gbkey=Gene;gene=SCL6.25c;gene_biotype=protein_coding;gene_synonym=SCL6.25c;locus_tag=SCO1468
NC_003888.3	RefSeq	CDS	1565986	1568310	.	-	0	ID=cds1433;Parent=gene1457;Dbxref=Genbank:NP_625749.1,GeneID:1096894;Name=NP_625749.1;Note=SCL6.25c%2C possible Ser/Thr protein kinase%2C len: 774 aa%3B similar to TR:Q9ZBL8 (EMBL:AL035159) Mycobacterium leprae  Ser/Thr kinase MLCB1450.19c%2C 763 aa%3B fasta scores: opt: 682 z-score: 645.1 E(): 1.6e-28%3B 36.0%25 identity in 736 aa overlap and to SW:KMOS_MSVMO (EMBL:V01180) Moloney murine sarcoma virus MOS Ser/Thr protein kinase transforming protein (EC 2.7.1.-) V-MOS%2C 374 aa%3B fasta scores: opt: 230 z-score: 224.5 E(): 4.4e-05%3B 23.4%25 identity in 269 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain;gbkey=CDS;gene=SCL6.25c;product=Ser/Thr protein kinase;protein_id=NP_625749.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1567327	1567920	.	-	.	ID=id1854;Dbxref=GeneID:1096894;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 40.80%2C E-value 3.2e-10;gbkey=misc_feature;gene=SCL6.25c
NC_003888.3	RefSeq	gene	1568408	1570513	.	-	.	ID=gene1458;Dbxref=GeneID:1096895;Name=SCL6.26c;gbkey=Gene;gene=SCL6.26c;gene_biotype=protein_coding;gene_synonym=SCL6.26c;locus_tag=SCO1469
NC_003888.3	RefSeq	CDS	1568408	1570513	.	-	0	ID=cds1434;Parent=gene1458;Dbxref=Genbank:NP_625750.1,GeneID:1096895;Name=NP_625750.1;Note=SCL6.26c%2C unknown%2C len: 701 aa. C-terminal region rich in Glycine and Alanine residues. Contains Pfam match to entry PF00089 trypsin%2C Trypsin;gbkey=CDS;gene=SCL6.26c;product=hypothetical protein;protein_id=NP_625750.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1570115	1570417	.	-	.	ID=id1855;Dbxref=GeneID:1096895;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 13.60%2C E-value 0.0019;gbkey=misc_feature;gene=SCL6.26c
NC_003888.3	RefSeq	gene	1570514	1570885	.	+	.	ID=gene1459;Dbxref=GeneID:1096896;Name=SCL6.27;gbkey=Gene;gene=SCL6.27;gene_biotype=protein_coding;gene_synonym=SCL6.27;locus_tag=SCO1470
NC_003888.3	RefSeq	CDS	1570514	1570885	.	+	0	ID=cds1435;Parent=gene1459;Dbxref=Genbank:NP_625751.1,GeneID:1096896;Name=NP_625751.1;Note=SCL6.27%2C hypothetical protein%2C len: 123 aa%3B similar to TR:Q53804 (EMBL:X73563) Streptomyces bambergiensis plasmid genes tra1 - tra5 and ORF4 and ORF7. Plasmid pBL1%2C 109 aa%3B fasta scores: opt: 134 z-score: 180.1 E(): 0.013%3B 31.1%25 identity in 74 aa overlap;gbkey=CDS;gene=SCL6.27;product=hypothetical protein;protein_id=NP_625751.1;transl_table=11
NC_003888.3	RefSeq	gene	1570932	1571951	.	+	.	ID=gene1460;Dbxref=GeneID:1096897;Name=SCL6.28;gbkey=Gene;gene=SCL6.28;gene_biotype=protein_coding;gene_synonym=SCL6.28;locus_tag=SCO1471
NC_003888.3	RefSeq	CDS	1570932	1571951	.	+	0	ID=cds1436;Parent=gene1460;Dbxref=Genbank:NP_625752.1,GeneID:1096897;Name=NP_625752.1;Note=SCL6.28%2C transposase%2C len: 339 aa%3B identical to TR:CAB71807 (EMBL:AL138662) Streptomyces coelicolor transposase SC8E4A.02%2C 339 aa;gbkey=CDS;gene=SCL6.28;product=transposase;protein_id=NP_625752.1;transl_table=11
NC_003888.3	RefSeq	gene	1571971	1573398	.	-	.	ID=gene1461;Dbxref=GeneID:1096898;Name=SCL6.29c;gbkey=Gene;gene=SCL6.29c;gene_biotype=protein_coding;gene_synonym=SCL6.29c;locus_tag=SCO1472
NC_003888.3	RefSeq	CDS	1571971	1573398	.	-	0	ID=cds1437;Parent=gene1461;Dbxref=Genbank:NP_625753.1,GeneID:1096898;Name=NP_625753.1;Note=SCL6.29c%2C conserved hypothetical Sun-family protein%2C len: 475 aa%3B similar to SW:SUN_BACSU (EMBL:Y13937) Bacillus subtilis sun protein%2C 447 aa%3B fasta scores: opt: 637 z-score: 711.7 E(): 3.2e-32%3B 32.0%25 identity in 472 aa overlap. Contains Pfam match to entry PF01029 NusB%2C NusB family and to entry PF01189 Nol1_Nop2_Sun%2C NOL1/NOP2/sun family and match to Prosite entry PS01153 NOL1/NOP2/sun family signature;gbkey=CDS;gene=SCL6.29c;product=Sun-family protein;protein_id=NP_625753.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1571983	1572612	.	-	.	ID=id1856;Dbxref=GeneID:1096898;Note=Pfam match to entry PF01189 Nol1_Nop2_Sun%2C NOL1/NOP2/sun family%2C score 185.20%2C E-value 6.5e-53;gbkey=misc_feature;gene=SCL6.29c
NC_003888.3	RefSeq	sequence_feature	1572307	1572342	.	-	.	ID=id1857;Dbxref=GeneID:1096898;Note=PS01153 NOL1/NOP2/sun family signature;gbkey=misc_feature;gene=SCL6.29c
NC_003888.3	RefSeq	sequence_feature	1572946	1573332	.	-	.	ID=id1858;Dbxref=GeneID:1096898;Note=Pfam match to entry PF01029 NusB%2C NusB family%2C score 120.40%2C E-value 3.4e-32;gbkey=misc_feature;gene=SCL6.29c
NC_003888.3	RefSeq	ribosome_entry_site	1573409	1573412	.	-	.	ID=id1859;gbkey=RBS
NC_003888.3	RefSeq	gene	1573487	1574419	.	-	.	ID=gene1462;Dbxref=GeneID:1096899;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;gene_synonym=SCL6.30c;locus_tag=SCO1473
NC_003888.3	RefSeq	CDS	1573487	1574419	.	-	0	ID=cds1438;Parent=gene1462;Dbxref=Genbank:NP_625754.1,GeneID:1096899;Name=NP_625754.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=NP_625754.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1573880	1574419	.	-	.	ID=id1860;Dbxref=GeneID:1096899;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 116.20%2C E-value 2.5e-32;gbkey=misc_feature;gene=fmt
NC_003888.3	RefSeq	ribosome_entry_site	1574715	1574720	.	+	.	ID=id1861;gbkey=RBS
NC_003888.3	RefSeq	gene	1574728	1575279	.	+	.	ID=gene1463;Dbxref=GeneID:1096900;Name=SCL6.31;gbkey=Gene;gene=SCL6.31;gene_biotype=protein_coding;gene_synonym=SCL6.31;locus_tag=SCO1474
NC_003888.3	RefSeq	CDS	1574728	1575279	.	+	0	ID=cds1439;Parent=gene1463;Dbxref=Genbank:NP_625755.1,GeneID:1096900;Name=NP_625755.1;Note=SCL6.31%2C unknown%2C len: 183 aa;gbkey=CDS;gene=SCL6.31;product=hypothetical protein;protein_id=NP_625755.1;transl_table=11
NC_003888.3	RefSeq	gene	1575452	1577602	.	-	.	ID=gene1464;Dbxref=GeneID:1096901;Name=SCL6.32c;gbkey=Gene;gene=SCL6.32c;gene_biotype=protein_coding;gene_synonym=SCL6.32c;locus_tag=SCO1475
NC_003888.3	RefSeq	CDS	1575452	1577602	.	-	0	ID=cds1440;Parent=gene1464;Dbxref=Genbank:NP_625756.1,GeneID:1096901;Name=NP_625756.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;gene=SCL6.32c;product=primosome assembly protein PriA;protein_id=NP_625756.1;transl_table=11
NC_003888.3	RefSeq	gene	1577727	1578935	.	-	.	ID=gene1465;Dbxref=GeneID:1096902;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;gene_synonym=metK,SCL6.33c;locus_tag=SCO1476
NC_003888.3	RefSeq	CDS	1577727	1578935	.	-	0	ID=cds1441;Parent=gene1465;Dbxref=Genbank:NP_625757.1,GeneID:1096902;Name=NP_625757.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;gene=metK;product=S-adenosylmethionine synthetase;protein_id=NP_625757.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1577772	1578929	.	-	.	ID=id1862;Dbxref=GeneID:1096902;Note=Pfam match to entry PF00438 S-AdoMet_synt%2C S-adenosylmethionine synthetase%2C score 733.50%2C E-value 0;gbkey=misc_feature;gene=metK
NC_003888.3	RefSeq	sequence_feature	1578084	1578110	.	-	.	ID=id1863;Dbxref=GeneID:1096902;Note=PS00377 S-adenosylmethionine synthetase signature 2;gbkey=misc_feature;gene=metK
NC_003888.3	RefSeq	sequence_feature	1578528	1578560	.	-	.	ID=id1864;Dbxref=GeneID:1096902;Note=PS00376 S-adenosylmethionine synthetase signature 1;gbkey=misc_feature;gene=metK
NC_003888.3	RefSeq	ribosome_entry_site	1578940	1578943	.	-	.	ID=id1865;gbkey=RBS
NC_003888.3	RefSeq	gene	1579175	1580458	.	-	.	ID=gene1466;Dbxref=GeneID:1096903;Name=SC9C5.01c;gbkey=Gene;gene=SC9C5.01c;gene_biotype=protein_coding;gene_synonym=SC9C5.01c,SCL6.34c;locus_tag=SCO1477
NC_003888.3	RefSeq	CDS	1579175	1580458	.	-	0	ID=cds1442;Parent=gene1466;Dbxref=Genbank:NP_733535.1,GeneID:1096903;Name=NP_733535.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;gene=SC9C5.01c;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase;protein_id=NP_733535.1;transl_table=11
NC_003888.3	RefSeq	gene	1580546	1580818	.	-	.	ID=gene1467;Dbxref=GeneID:1096904;Name=SC9C5.02c;gbkey=Gene;gene=SC9C5.02c;gene_biotype=protein_coding;gene_synonym=SC9C5.02c;locus_tag=SCO1478
NC_003888.3	RefSeq	CDS	1580546	1580818	.	-	0	ID=cds1443;Parent=gene1467;Dbxref=Genbank:NP_625758.1,GeneID:1096904;Name=NP_625758.1;Note=Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=SC9C5.02c;product=DNA-directed RNA polymerase subunit omega;protein_id=NP_625758.1;transl_table=11
NC_003888.3	RefSeq	gene	1580881	1581474	.	-	.	ID=gene1468;Dbxref=GeneID:1096905;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;gene_synonym=SC9C5.03c;locus_tag=SCO1479
NC_003888.3	RefSeq	CDS	1580881	1581474	.	-	0	ID=cds1444;Parent=gene1468;Dbxref=Genbank:NP_625759.1,GeneID:1096905;Name=NP_625759.1;Note=Essential for recycling GMP and indirectly%2C cGMP;gbkey=CDS;gene=gmk;product=guanylate kinase;protein_id=NP_625759.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1581007	1581321	.	-	.	ID=id1866;Dbxref=GeneID:1096905;Note=Pfam match to entry PF00625 Guanylate_kin%2C Guanylate kinase%2C score 144.80%2C E-value 1.5e-39;gbkey=misc_feature;gene=gmk
NC_003888.3	RefSeq	sequence_feature	1581271	1581324	.	-	.	ID=id1867;Dbxref=GeneID:1096905;Note=PS00856 Guanylate kinase signature;gbkey=misc_feature;gene=gmk
NC_003888.3	RefSeq	sequence_feature	1581382	1581405	.	-	.	ID=id1868;Dbxref=GeneID:1096905;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=gmk
NC_003888.3	RefSeq	gene	1581512	1581835	.	-	.	ID=gene1469;Dbxref=GeneID:1096906;Name=SC9C5.04c;gbkey=Gene;gene=SC9C5.04c;gene_biotype=protein_coding;gene_synonym=SC9C5.04c;locus_tag=SCO1480
NC_003888.3	RefSeq	CDS	1581512	1581835	.	-	0	ID=cds1445;Parent=gene1469;Dbxref=Genbank:NP_625760.1,GeneID:1096906;Name=NP_625760.1;Note=SC9C5.04c%2C conserved hypothetical protein%2C len: 107 aa%3B highly similar to TR:P96802 (EMBL:U75344) Mycobacterium smegmatis integration host factor MihF%2C 105 aa%3B fasta scores: opt: 378 z-score: 470.3 E(): 1e-1%3B 58.1%25 identity in 105 aa overlap;gbkey=CDS;gene=SC9C5.04c;product=hypothetical protein;protein_id=NP_625760.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1581846	1581849	.	-	.	ID=id1869;gbkey=RBS
NC_003888.3	RefSeq	gene	1582059	1582895	.	-	.	ID=gene1470;Dbxref=GeneID:1096907;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;gene_synonym=SC9C5.05c;locus_tag=SCO1481
NC_003888.3	RefSeq	CDS	1582059	1582895	.	-	0	ID=cds1446;Parent=gene1470;Dbxref=Genbank:NP_625761.1,GeneID:1096907;Name=NP_625761.1;Note=type 2 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase;gbkey=CDS;gene=pyrF;product=orotidine 5'-phosphate decarboxylase;protein_id=NP_625761.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1582419	1582886	.	-	.	ID=id1870;Dbxref=GeneID:1096907;Note=Pfam match to entry PF00215 OMPdecase%2C Orotidine 5'-phosphate decarboxylases%2C score 79.30%2C E-value 4.4e-22;gbkey=misc_feature;gene=pyrF
NC_003888.3	RefSeq	sequence_feature	1582584	1582625	.	-	.	ID=id1871;Dbxref=GeneID:1096907;Note=PS00156 Orotidine 5'-phosphate decarboxylase active site;gbkey=misc_feature;gene=pyrF
NC_003888.3	RefSeq	gene	1582901	1584007	.	-	.	ID=gene1471;Dbxref=GeneID:1096908;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;gene_synonym=pyrD,SC9C5.06c;locus_tag=SCO1482
NC_003888.3	RefSeq	CDS	1582901	1584007	.	-	0	ID=cds1447;Parent=gene1471;Dbxref=Genbank:NP_625762.1,GeneID:1096908;Name=NP_625762.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;gene=pyrD;product=dihydroorotate dehydrogenase 2;protein_id=NP_625762.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1582994	1583857	.	-	.	ID=id1872;Dbxref=GeneID:1096908;Note=Pfam match to entry PF01180 DHOdehase%2C Dihydroorotate dehydrogenase%2C score 421.90%2C E-value 6e-123;gbkey=misc_feature;gene=pyrD
NC_003888.3	RefSeq	sequence_feature	1583048	1583110	.	-	.	ID=id1873;Dbxref=GeneID:1096908;Note=PS00912 Dihydroorotate dehydrogenase signature 2;gbkey=misc_feature;gene=pyrD
NC_003888.3	RefSeq	ribosome_entry_site	1584011	1584015	.	-	.	ID=id1874;gbkey=RBS
NC_003888.3	RefSeq	gene	1584104	1587412	.	-	.	ID=gene1472;Dbxref=GeneID:1096909;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;gene_synonym=pyrA,SC9C5.07c;locus_tag=SCO1483
NC_003888.3	RefSeq	CDS	1584104	1587412	.	-	0	ID=cds1448;Parent=gene1472;Dbxref=Genbank:NP_625763.1,GeneID:1096909;Name=NP_625763.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=NP_625763.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1584770	1584958	.	-	.	ID=id1875;Dbxref=GeneID:1096909;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 40.70%2C E-value 9.5e-11;gbkey=misc_feature;gene=carB
NC_003888.3	RefSeq	sequence_feature	1584866	1584889	.	-	.	ID=id1876;Dbxref=GeneID:1096909;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=carB
NC_003888.3	RefSeq	sequence_feature	1585118	1585735	.	-	.	ID=id1877;Dbxref=GeneID:1096909;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 153.40%2C E-value 5.7e-43;gbkey=misc_feature;gene=carB
NC_003888.3	RefSeq	sequence_feature	1585232	1585276	.	-	.	ID=id1878;Dbxref=GeneID:1096909;Note=PS00866 Carbamoyl-phosphate synthase subdomain signature 1;gbkey=misc_feature;gene=carB
NC_003888.3	RefSeq	sequence_feature	1586177	1587307	.	-	.	ID=id1879;Dbxref=GeneID:1096909;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 551.70%2C E-value 4.9e-162;gbkey=misc_feature;gene=carB
NC_003888.3	RefSeq	sequence_feature	1586483	1586506	.	-	.	ID=id1880;Dbxref=GeneID:1096909;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=carB
NC_003888.3	RefSeq	sequence_feature	1586861	1586905	.	-	.	ID=id1881;Dbxref=GeneID:1096909;Note=PS00866 Carbamoyl-phosphate synthase subdomain signature 1;gbkey=misc_feature;gene=carB
NC_003888.3	RefSeq	gene	1587405	1588547	.	-	.	ID=gene1473;Dbxref=GeneID:1096910;Name=pyrAA;gbkey=Gene;gene=pyrAA;gene_biotype=protein_coding;gene_synonym=pyrAA,SC9C5.08c;locus_tag=SCO1484
NC_003888.3	RefSeq	CDS	1587405	1588547	.	-	0	ID=cds1449;Parent=gene1473;Dbxref=Genbank:NP_625764.1,GeneID:1096910;Name=NP_625764.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;gene=pyrAA;product=carbamoyl phosphate synthase small subunit;protein_id=NP_625764.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1587419	1587424	.	-	.	ID=id1882;Dbxref=GeneID:1096910;gbkey=RBS;gene=pyrAA
NC_003888.3	RefSeq	sequence_feature	1587426	1587980	.	-	.	ID=id1883;Dbxref=GeneID:1096910;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 168.30%2C E-value 1.3e-46;gbkey=misc_feature;gene=pyrAA
NC_003888.3	RefSeq	sequence_feature	1587738	1587773	.	-	.	ID=id1884;Dbxref=GeneID:1096910;Note=PS00442 Glutamine amidotransferases class-I active site;gbkey=misc_feature;gene=pyrAA
NC_003888.3	RefSeq	sequence_feature	1588029	1588511	.	-	.	ID=id1885;Dbxref=GeneID:1096910;Note=Pfam match to entry PF00988 CPSase_sm_chain%2C Carbamoyl-phosphate synthase small chain%2C CPSase domain%2C score 283.00%2C E-value 3.8e-81;gbkey=misc_feature;gene=pyrAA
NC_003888.3	RefSeq	gene	1588544	1589119	.	-	.	ID=gene1474;Dbxref=GeneID:1096911;Name=SC9C5.09c;gbkey=Gene;gene=SC9C5.09c;gene_biotype=protein_coding;gene_synonym=SC9C5.09c;locus_tag=SCO1485
NC_003888.3	RefSeq	CDS	1588544	1589119	.	-	0	ID=cds1450;Parent=gene1474;Dbxref=Genbank:NP_625765.1,GeneID:1096911;Name=NP_625765.1;Note=SC9C5.09c%2C possible integral membrane protein%2C len: 191 aa%3B similar to TR:P71810 (EMBL:Z81011) Mycobacterium tuberculosis hypothetical 18.2 kD protein%2C 165 aa%3B fasta scores: opt: 301 z-score: 362.9 E(): 9.7e-13%3B 33.1%25 identity in 148 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9C5.09c;product=hypothetical protein;protein_id=NP_625765.1;transl_table=11
NC_003888.3	RefSeq	gene	1589116	1590402	.	-	.	ID=gene1475;Dbxref=GeneID:1096912;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;gene_synonym=SC9C5.10c;locus_tag=SCO1486
NC_003888.3	RefSeq	CDS	1589116	1590402	.	-	0	ID=cds1451;Parent=gene1475;Dbxref=Genbank:NP_625766.1,GeneID:1096912;Name=NP_625766.1;Note=catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrC;product=dihydroorotase;protein_id=NP_625766.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1589140	1590288	.	-	.	ID=id1886;Dbxref=GeneID:1096912;Note=Pfam match to entry PF00744 Dihydrooratase%2C Dihydroorotase-like%2C score 288.20%2C E-value 1e-82;gbkey=misc_feature;gene=pyrC
NC_003888.3	RefSeq	sequence_feature	1589467	1589502	.	-	.	ID=id1887;Dbxref=GeneID:1096912;Note=PS00483 Dihydroorotase signature 2;gbkey=misc_feature;gene=pyrC
NC_003888.3	RefSeq	gene	1590407	1591387	.	-	.	ID=gene1476;Dbxref=GeneID:1096913;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;gene_synonym=SC9C5.11c;locus_tag=SCO1487
NC_003888.3	RefSeq	CDS	1590407	1591387	.	-	0	ID=cds1452;Parent=gene1476;Dbxref=Genbank:NP_625767.1,GeneID:1096913;Name=NP_625767.1;Note=catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase catalytic subunit;protein_id=NP_625767.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1590413	1590416	.	-	.	ID=id1888;Dbxref=GeneID:1096913;gbkey=RBS;gene=pyrB
NC_003888.3	RefSeq	sequence_feature	1590458	1590745	.	-	.	ID=id1889;Dbxref=GeneID:1096913;Note=Pfam match to entry PF00185 OTCace%2C Aspartate/ornithine carbamoyltransferase%2C score 36.60%2C E-value 3e-09;gbkey=misc_feature;gene=pyrB
NC_003888.3	RefSeq	sequence_feature	1590782	1591381	.	-	.	ID=id1890;Dbxref=GeneID:1096913;Note=Pfam match to entry PF00185 OTCace%2C Aspartate/ornithine carbamoyltransferase%2C score 201.60%2C E-value 1.2e-56;gbkey=misc_feature;gene=pyrB
NC_003888.3	RefSeq	sequence_feature	1591220	1591243	.	-	.	ID=id1891;Dbxref=GeneID:1096913;Note=PS00097 Aspartate and ornithine carbamoyltransferases signature;gbkey=misc_feature;gene=pyrB
NC_003888.3	RefSeq	ribosome_entry_site	1591396	1591399	.	-	.	ID=id1892;gbkey=RBS
NC_003888.3	RefSeq	gene	1591502	1592083	.	-	.	ID=gene1477;Dbxref=GeneID:1096914;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;gene_synonym=pyrR,SC9C5.12c;locus_tag=SCO1488
NC_003888.3	RefSeq	CDS	1591502	1592083	.	-	0	ID=cds1453;Parent=gene1477;Dbxref=Genbank:NP_625768.1,GeneID:1096914;Name=NP_625768.1;Note=regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes%2C also has been shown to have uracil phosphoribosyltransferase activity;gbkey=CDS;gene=pyrR;product=bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase;protein_id=NP_625768.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1591574	1592068	.	-	.	ID=id1893;Dbxref=GeneID:1096914;Note=Pfam match to entry PF00156 Pribosyltran%2C Phosphoribosyl transferase domain%2C score 77.20%2C E-value 3.5e-19;gbkey=misc_feature;gene=pyrR
NC_003888.3	RefSeq	sequence_feature	1591828	1593178	.	+	.	ID=id1894;Note=previously sequenced DNA fragment EMBL:AF045549 Streptomyces coelicolor DNA binding protein (bldD) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	1592373	1592376	.	+	.	ID=id1895;gbkey=RBS
NC_003888.3	RefSeq	gene	1592381	1592884	.	+	.	ID=gene1478;Dbxref=GeneID:1096915;Name=bldD;gbkey=Gene;gene=bldD;gene_biotype=protein_coding;gene_synonym=bldD,SC9C5.13;locus_tag=SCO1489
NC_003888.3	RefSeq	CDS	1592381	1592884	.	+	0	ID=cds1454;Parent=gene1478;Dbxref=Genbank:NP_625769.1,GeneID:1096915;Name=NP_625769.1;Note=SC9C5.13%2C bldD%2C DNA-binding protein%2C len: 167 aa%3B identical to previously sequenced TR:O52732 (EMBL:AF045549) Streptomyces coelicolor DNA binding protein BldD%2C 167 aa. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix;gbkey=CDS;gene=bldD;product=DNA-binding protein;protein_id=NP_625769.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1592417	1592587	.	+	.	ID=id1896;Dbxref=GeneID:1096915;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 47.10%2C E-value 3.9e-10;gbkey=misc_feature;gene=bldD
NC_003888.3	RefSeq	stem_loop	1592910	1592959	.	+	.	ID=id1897;Note=possible stem-loop. 13580 GCCGCCGGGGTGGCCGGAACCGT 13602 - 13607 ACGGTCCCGGCCACCCCGGCGGC 13629. Score 62: 22/23 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1593088	1593516	.	-	.	ID=gene1479;Dbxref=GeneID:1096916;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;gene_synonym=SC9C5.14c;locus_tag=SCO1490
NC_003888.3	RefSeq	CDS	1593088	1593516	.	-	0	ID=cds1455;Parent=gene1479;Dbxref=Genbank:NP_625770.1,GeneID:1096916;Name=NP_625770.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=transcription antitermination protein NusB;protein_id=NP_625770.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1593118	1593510	.	-	.	ID=id1898;Dbxref=GeneID:1096916;Note=Pfam match to entry PF01029 NusB%2C NusB family%2C score 108.80%2C E-value 1.1e-28;gbkey=misc_feature;gene=nusB
NC_003888.3	RefSeq	gene	1593519	1594085	.	-	.	ID=gene1480;Dbxref=GeneID:1096917;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;gene_synonym=efp,SC9C5.15c;locus_tag=SCO1491
NC_003888.3	RefSeq	CDS	1593519	1594085	.	-	0	ID=cds1456;Parent=gene1480;Dbxref=Genbank:NP_625771.1,GeneID:1096917;Name=NP_625771.1;Note=Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA;gbkey=CDS;gene=efp;product=elongation factor P;protein_id=NP_625771.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1593528	1594085	.	-	.	ID=id1899;Dbxref=GeneID:1096917;Note=Pfam match to entry PF01132 EFP%2C Elongation factor P (EF-P)%2C score 381.90%2C E-value 6.6e-111;gbkey=misc_feature;gene=efp
NC_003888.3	RefSeq	sequence_feature	1593576	1593635	.	-	.	ID=id1900;Dbxref=GeneID:1096917;Note=PS01275 Elongation factor P signature;gbkey=misc_feature;gene=efp
NC_003888.3	RefSeq	gene	1594150	1595256	.	-	.	ID=gene1481;Dbxref=GeneID:1096918;Name=SC9C5.16c;gbkey=Gene;gene=SC9C5.16c;gene_biotype=protein_coding;gene_synonym=SC9C5.16c;locus_tag=SCO1492
NC_003888.3	RefSeq	CDS	1594150	1595256	.	-	0	ID=cds1457;Parent=gene1481;Dbxref=Genbank:NP_625772.1,GeneID:1096918;Name=NP_625772.1;Note=SC9C5.16c%2C possible peptidase%2C len: 368 aa%3B similar to TR:Q9X842 (EMBL:AL049727) Streptomyces coelicolor dipeptidase SC9B1.23%2C 376 aa%3B fasta scores: opt: 552 z-score: 631.8 E(): 1e-27%3B 33.8%25 identity in 370 aa overlap. Contains Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24;gbkey=CDS;gene=SC9C5.16c;product=peptidase;protein_id=NP_625772.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1594159	1594848	.	-	.	ID=id1901;Dbxref=GeneID:1096918;Note=Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24%2C score 123.90%2C E-value 3.1e-33;gbkey=misc_feature;gene=SC9C5.16c
NC_003888.3	RefSeq	gene	1595436	1596323	.	-	.	ID=gene1482;Dbxref=GeneID:1096919;Name=SC9C5.17c;gbkey=Gene;gene=SC9C5.17c;gene_biotype=protein_coding;gene_synonym=SC9C5.17c;locus_tag=SCO1493
NC_003888.3	RefSeq	CDS	1595436	1596323	.	-	0	ID=cds1458;Parent=gene1482;Dbxref=Genbank:NP_625773.1,GeneID:1096919;Name=NP_625773.1;Note=SC9C5.17c%2C possible ATP/GTP binding protein ( hypothetical protein)%2C len:295 aa%3B similar to TR:Q9S4Q8 (EMBL:AF121009) Mycobacterium tuberculosis hypothetical 33.5 kD protein%2C 342 aa%3B fasta scores: opt: 307 z-score: 233.4 E(): 1.6e-05%3B 41.1%25 identity in 124 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Contains also degenerate 3x repeat: PAPAP(G/Q)PH at N-terminal domain and high content in proline amino acid residues. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC9C5.17c;product=hypothetical protein;protein_id=NP_625773.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1595943	1595966	.	-	.	ID=id1902;Dbxref=GeneID:1096919;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9C5.17c
NC_003888.3	RefSeq	repeat_region	1596093	1596161	.	-	.	ID=id1903;Dbxref=GeneID:1096919;Note=degenerate repeat translated in SC9C5.17c;gbkey=repeat_region;gene=SC9C5.17c
NC_003888.3	RefSeq	ribosome_entry_site	1596333	1596336	.	-	.	ID=id1904;gbkey=RBS
NC_003888.3	RefSeq	gene	1596490	1597581	.	-	.	ID=gene1483;Dbxref=GeneID:1096920;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;gene_synonym=SC9C5.18c;locus_tag=SCO1494
NC_003888.3	RefSeq	CDS	1596490	1597581	.	-	0	ID=cds1459;Parent=gene1483;Dbxref=Genbank:NP_625774.1,GeneID:1096920;Name=NP_625774.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=NP_625774.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1596505	1597518	.	-	.	ID=id1905;Dbxref=GeneID:1096920;Note=Pfam match to entry PF01761 DHQ_synthase%2C 3-dehydroquinate synthase%2C score 502.00%2C E-value 4.6e-147;gbkey=misc_feature;gene=aroB
NC_003888.3	RefSeq	gene	1597578	1598093	.	-	.	ID=gene1484;Dbxref=GeneID:1096921;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;gene_synonym=SC9C5.19c;locus_tag=SCO1495
NC_003888.3	RefSeq	CDS	1597578	1598093	.	-	0	ID=cds1460;Parent=gene1484;Dbxref=Genbank:NP_625775.1,GeneID:1096921;Name=NP_625775.1;Note=catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=NP_625775.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1597593	1598084	.	-	.	ID=id1906;Dbxref=GeneID:1096921;Note=Pfam match to entry PF01202 SKI%2C Shikimate kinase%2C score 177.30%2C E-value 2.5e-49;gbkey=misc_feature;gene=aroK
NC_003888.3	RefSeq	ribosome_entry_site	1597593	1597599	.	-	.	ID=id1907;Dbxref=GeneID:1096921;gbkey=RBS;gene=aroK
NC_003888.3	RefSeq	sequence_feature	1597842	1597919	.	-	.	ID=id1908;Dbxref=GeneID:1096921;Note=PS01128 Shikimate kinase signature;gbkey=misc_feature;gene=aroK
NC_003888.3	RefSeq	sequence_feature	1598043	1598066	.	-	.	ID=id1909;Dbxref=GeneID:1096921;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=aroK
NC_003888.3	RefSeq	gene	1598090	1599274	.	-	.	ID=gene1485;Dbxref=GeneID:1096922;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;gene_synonym=aroF,SC9C5.20c;locus_tag=SCO1496
NC_003888.3	RefSeq	CDS	1598090	1599274	.	-	0	ID=cds1461;Parent=gene1485;Dbxref=Genbank:NP_625776.1,GeneID:1096922;Name=NP_625776.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroF;product=chorismate synthase;protein_id=NP_625776.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1598100	1598103	.	-	.	ID=id1910;Dbxref=GeneID:1096922;gbkey=RBS;gene=aroF
NC_003888.3	RefSeq	sequence_feature	1598159	1599265	.	-	.	ID=id1911;Dbxref=GeneID:1096922;Note=Pfam match to entry PF01264 Chorismate_synt%2C Chorismate synthase%2C score 582.90%2C E-value 2.5e-177;gbkey=misc_feature;gene=aroF
NC_003888.3	RefSeq	sequence_feature	1598198	1598248	.	-	.	ID=id1912;Dbxref=GeneID:1096922;Note=PS00789 Chorismate synthase signature 3;gbkey=misc_feature;gene=aroF
NC_003888.3	RefSeq	sequence_feature	1598825	1598869	.	-	.	ID=id1913;Dbxref=GeneID:1096922;Note=PS00788 Chorismate synthase signature 2;gbkey=misc_feature;gene=aroF
NC_003888.3	RefSeq	ribosome_entry_site	1599280	1599283	.	-	.	ID=id1914;gbkey=RBS
NC_003888.3	RefSeq	gene	1599480	1599845	.	-	.	ID=gene1486;Dbxref=GeneID:1096923;Name=SC9C5.21c;gbkey=Gene;gene=SC9C5.21c;gene_biotype=protein_coding;gene_synonym=SC9C5.21c;locus_tag=SCO1497
NC_003888.3	RefSeq	CDS	1599480	1599845	.	-	0	ID=cds1462;Parent=gene1486;Dbxref=Genbank:NP_625777.1,GeneID:1096923;Name=NP_625777.1;Note=SC9C5.21c%2C possible integral membrane protein%2C len: 121 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9C5.21c;product=hypothetical protein;protein_id=NP_625777.1;transl_table=11
NC_003888.3	RefSeq	gene	1599894	1600733	.	-	.	ID=gene1487;Dbxref=GeneID:1096924;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;gene_synonym=SC9C5.22c;locus_tag=SCO1498
NC_003888.3	RefSeq	CDS	1599894	1600733	.	-	0	ID=cds1463;Parent=gene1487;Dbxref=Genbank:NP_625778.2,GeneID:1096924;Name=NP_625778.2;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;product=shikimate 5-dehydrogenase;protein_id=NP_625778.2;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1599954	1600658	.	-	.	ID=id1915;Dbxref=GeneID:1096924;Note=Pfam match to entry PF01488 Shikimate_DH%2C Shikimate;gbkey=misc_feature;gene=aroE
NC_003888.3	RefSeq	gene	1600714	1602462	.	-	.	ID=gene1488;Dbxref=GeneID:1096925;Name=SC9C5.23c;gbkey=Gene;gene=SC9C5.23c;gene_biotype=protein_coding;gene_synonym=SC9C5.23c;locus_tag=SCO1499
NC_003888.3	RefSeq	CDS	1600714	1602462	.	-	0	ID=cds1464;Parent=gene1488;Dbxref=Genbank:NP_625779.1,GeneID:1096925;Name=NP_625779.1;Note=SC9C5.23c%2C possible integral membrane protein%2C len: 582 aa. Contains possible hydrophobic membrane spanning region and degenerate repeat: 2x QDYQQQGY;gbkey=CDS;gene=SC9C5.23c;product=hypothetical protein;protein_id=NP_625779.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1602151	1602204	.	-	.	ID=id1916;Dbxref=GeneID:1096925;Note=degenerate repeat region translated in SC9C5.23c;gbkey=repeat_region;gene=SC9C5.23c
NC_003888.3	RefSeq	gene	1602591	1603094	.	-	.	ID=gene1489;Dbxref=GeneID:1096926;Name=SC9C5.24c;gbkey=Gene;gene=SC9C5.24c;gene_biotype=protein_coding;gene_synonym=SC9C5.24c;locus_tag=SCO1500
NC_003888.3	RefSeq	CDS	1602591	1603094	.	-	0	ID=cds1465;Parent=gene1489;Dbxref=Genbank:NP_625780.1,GeneID:1096926;Name=NP_625780.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;gene=SC9C5.24c;product=Holliday junction resolvase-like protein;protein_id=NP_625780.1;transl_table=11
NC_003888.3	RefSeq	gene	1603091	1605763	.	-	.	ID=gene1490;Dbxref=GeneID:1096927;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;gene_synonym=SC9C5.25c;locus_tag=SCO1501
NC_003888.3	RefSeq	CDS	1603091	1605763	.	-	0	ID=cds1466;Parent=gene1490;Dbxref=Genbank:NP_625781.1,GeneID:1096927;Name=NP_625781.1;Note=Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=alaS;product=alanyl-tRNA synthetase;protein_id=NP_625781.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1603130	1605751	.	-	.	ID=id1917;Dbxref=GeneID:1096927;Note=Pfam match to entry PF01411 tRNA-synt_2c%2C tRNA synthetases class II (A)%2C score 1149.50%2C E-value 0;gbkey=misc_feature;gene=alaS
NC_003888.3	RefSeq	sequence_feature	1605044	1605073	.	-	.	ID=id1918;Dbxref=GeneID:1096927;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2;gbkey=misc_feature;gene=alaS
NC_003888.3	RefSeq	gene	1605763	1606119	.	-	.	ID=gene1491;Dbxref=GeneID:1096928;Name=SC9C5.26c;gbkey=Gene;gene=SC9C5.26c;gene_biotype=protein_coding;gene_synonym=SC9C5.26c;locus_tag=SCO1502
NC_003888.3	RefSeq	CDS	1605763	1606119	.	-	0	ID=cds1467;Parent=gene1491;Dbxref=Genbank:NP_625782.1,GeneID:1096928;Name=NP_625782.1;Note=SC9C5.26c%2C possible hypothetical protein%2C len: 118 aa. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SC9C5.26c;product=hypothetical protein;protein_id=NP_625782.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1605770	1605774	.	-	.	ID=id1919;Dbxref=GeneID:1096928;gbkey=RBS;gene=SC9C5.26c
NC_003888.3	RefSeq	gene	1606127	1606576	.	-	.	ID=gene1492;Dbxref=GeneID:1096929;Name=SC9C5.27c;gbkey=Gene;gene=SC9C5.27c;gene_biotype=protein_coding;gene_synonym=SC9C5.27c;locus_tag=SCO1503
NC_003888.3	RefSeq	CDS	1606127	1606576	.	-	0	ID=cds1468;Parent=gene1492;Dbxref=Genbank:NP_625783.1,GeneID:1096929;Name=NP_625783.1;Note=SC9C5.27c%2C possible hypothetical protein%2C len: 149 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC9C5.27c;product=hypothetical protein;protein_id=NP_625783.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1606580	1606583	.	-	.	ID=id1920;gbkey=RBS
NC_003888.3	RefSeq	gene	1606679	1608931	.	+	.	ID=gene1493;Dbxref=GeneID:1096930;Name=SC9C5.28;gbkey=Gene;gene=SC9C5.28;gene_biotype=protein_coding;gene_synonym=SC9C5.28;locus_tag=SCO1504
NC_003888.3	RefSeq	CDS	1606679	1608931	.	+	0	ID=cds1469;Parent=gene1493;Dbxref=Genbank:NP_625784.1,GeneID:1096930;Name=NP_625784.1;Note=SC9C5.28%2C regulator%2C len: 750 aa%3B similar to TR:O53720 (EMBL:AL021931) Mycobacterium tuberculosis transcriptional regulatory protein MTV036.21%2C 1085 aa%3B fasta scores: opt: 975 z-score: 1090.3 E(): 0%3B 34.3%25 identity in 724 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC9C5.28;product=regulator;protein_id=NP_625784.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1606874	1606897	.	+	.	ID=id1921;Dbxref=GeneID:1096930;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9C5.28
NC_003888.3	RefSeq	gene	1608976	1609590	.	-	.	ID=gene1494;Dbxref=GeneID:1096931;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;gene_synonym=rspD,SC9C5.29c;locus_tag=SCO1505
NC_003888.3	RefSeq	CDS	1608976	1609590	.	-	0	ID=cds1470;Parent=gene1494;Dbxref=Genbank:NP_625785.1,GeneID:1096931;Name=NP_625785.1;Note=primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination;gbkey=CDS;gene=rpsD;product=30S ribosomal protein S4;protein_id=NP_625785.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1609174	1609317	.	-	.	ID=id1922;Dbxref=GeneID:1096931;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 86.70%2C E-value 4.8e-22;gbkey=misc_feature;gene=rpsD
NC_003888.3	RefSeq	sequence_feature	1609318	1609590	.	-	.	ID=id1923;Dbxref=GeneID:1096931;Note=Pfam match to entry PF00163 Ribosomal_S4%2C Ribosomal protein S4/S9 N-terminal domain%2C score 46.20%2C E-value 7.4e-10;gbkey=misc_feature;gene=rpsD
NC_003888.3	RefSeq	gene	1609885	1611240	.	-	.	ID=gene1495;Dbxref=GeneID:1096932;Name=SC9C5.30c;gbkey=Gene;gene=SC9C5.30c;gene_biotype=protein_coding;gene_synonym=SC9C5.30c;locus_tag=SCO1506
NC_003888.3	RefSeq	CDS	1609885	1611240	.	-	0	ID=cds1471;Parent=gene1495;Dbxref=Genbank:NP_625786.1,GeneID:1096932;Name=NP_625786.1;Note=SC9C5.30c%2C conserved ATP/GTP binding protein%2C len: 451 aa%3B similar to SW:Y0A9_MYCTU (EMBL:Z77250) Mycobacterium tuberculosis hypothetical 47.5 kD protein MTCY9C4.09%2C 452 aa%3B fasta scores: opt: 1742 z-score: 1796.7 E(): 0%3B 64.4%25 identity in 430 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC9C5.30c;product=recombination factor protein RarA;protein_id=NP_625786.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1611013	1611036	.	-	.	ID=id1924;Dbxref=GeneID:1096932;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9C5.30c
NC_003888.3	RefSeq	gene	1611310	1612032	.	-	.	ID=gene1496;Dbxref=GeneID:1096933;Name=SC9C5.31c;gbkey=Gene;gene=SC9C5.31c;gene_biotype=protein_coding;gene_synonym=SC9C5.31c;locus_tag=SCO1507
NC_003888.3	RefSeq	CDS	1611310	1612032	.	-	0	ID=cds1472;Parent=gene1496;Dbxref=Genbank:NP_625787.1,GeneID:1096933;Name=NP_625787.1;Note=SC9C5.31c%2C possible integral membrane protein%2C len: 240 aa%3B similar to TR:O69464 (EMBL:AL023635) Mycobacterium leprae  integral membrane protein MLCB1243.07%2C 214 aa%3B fasta scores: opt: 511 z-score: 600.4 E(): 5.7e-26%3B 36.1%25 identity in 191 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9C5.31c;product=hypothetical protein;protein_id=NP_625787.1;transl_table=11
NC_003888.3	RefSeq	gene	1612166	1613443	.	-	.	ID=gene1497;Dbxref=GeneID:1096934;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;gene_synonym=SC9C5.32c;locus_tag=SCO1508
NC_003888.3	RefSeq	CDS	1612166	1613443	.	-	0	ID=cds1473;Parent=gene1497;Dbxref=Genbank:NP_625788.1,GeneID:1096934;Name=NP_625788.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=NP_625788.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1612217	1613269	.	-	.	ID=id1925;Dbxref=GeneID:1096934;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetase class II (G%2C H%2C P%2C S and T)%2C score 158.80%2C E-value 9.1e-44;gbkey=misc_feature;gene=hisS
NC_003888.3	RefSeq	gene	1613440	1614147	.	-	.	ID=gene1498;Dbxref=GeneID:1096935;Name=SC9C5.33c;gbkey=Gene;gene=SC9C5.33c;gene_biotype=protein_coding;gene_synonym=SC9C5.33c;locus_tag=SCO1509
NC_003888.3	RefSeq	CDS	1613440	1614147	.	-	0	ID=cds1474;Parent=gene1498;Dbxref=Genbank:NP_625789.1,GeneID:1096935;Name=NP_625789.1;Note=SC9C5.33c%2C possible hydrolase%2C len: 235 aa%3B similar to SW:YCBL_ECOLI (EMBL:AE000195) Escherichia coli hypothetical 23.8 kD protein in MukB-AspC intergenic region YcbL%2C 215 aa%3B fasta scores: opt: 284 z-score: 328.0 E(): 8.4e-11%3B 32.6%25 identity in 215 aa overlap and to TR:CAB83688 (EMBL:AL162753) Neisseria meningitidis hydrolase NMA0387%2C 210 aa%3B fasta scores: opt: 239 z-score: 277.9 E(): 5.2e-08%3B 32.5%25 identity in 206 aa overlap. Contains Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily;gbkey=CDS;gene=SC9C5.33c;product=hydrolase;protein_id=NP_625789.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1613446	1613450	.	-	.	ID=id1926;Dbxref=GeneID:1096935;gbkey=RBS;gene=SC9C5.33c
NC_003888.3	RefSeq	sequence_feature	1613542	1614126	.	-	.	ID=id1927;Dbxref=GeneID:1096935;Note=Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily%2C score 134.50%2C E-value 1.9e-36;gbkey=misc_feature;gene=SC9C5.33c
NC_003888.3	RefSeq	ribosome_entry_site	1614153	1614156	.	-	.	ID=id1928;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1614318	1614322	.	+	.	ID=id1929;gbkey=RBS
NC_003888.3	RefSeq	gene	1614331	1615164	.	+	.	ID=gene1499;Dbxref=GeneID:1096936;Name=SC9C5.34;gbkey=Gene;gene=SC9C5.34;gene_biotype=protein_coding;gene_synonym=SC9C5.34;locus_tag=SCO1510
NC_003888.3	RefSeq	CDS	1614331	1615164	.	+	0	ID=cds1475;Parent=gene1499;Dbxref=Genbank:NP_625790.1,GeneID:1096936;Name=NP_625790.1;Note=SC9C5.34%2C possible peptidyl-prolyl cis-trans isomerase%2C len: 277 aa%3B similar to SW:CYPB_MYCLE (EMBL:U00011) Mycobacterium leprae probable peptidyl-prolyl cis-trans isomerase PpiB or MLCB1259.10c%2C 295 aa%3B fasta scores: opt: 514 z-score: 573.6 E(): 1.8e-24%3B 40.0%25 identity in 295 aa overlap and to SW:CYPB_BACSU (EMBL:L09228) Bacillus subtilis peptidyl-prolyl cis-trans isomerase PpiB%2C 143 aa%3B fasta scores: opt: 240 z-score: 276.9 E(): 5.9e-08%3B 37.0%25 identity in 127 aa overlap. Contains Pfam match to entry PF00160 pro_isomerase%2C Cyclophilin type peptidyl-prolyl cis-trans isomerase. Contains also possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9C5.34;product=peptidyl-prolyl cis-trans isomerase;protein_id=NP_625790.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1614661	1615158	.	+	.	ID=id1930;Dbxref=GeneID:1096936;Note=Pfam match to entry PF00160 pro_isomerase%2C Cyclophilin type peptidyl-prolyl cis-trans isomerase%2C score 51.20%2C E-value 8.2e-14;gbkey=misc_feature;gene=SC9C5.34
NC_003888.3	RefSeq	ribosome_entry_site	1615290	1615295	.	+	.	ID=id1931;gbkey=RBS
NC_003888.3	RefSeq	gene	1615300	1616367	.	+	.	ID=gene1500;Dbxref=GeneID:1096937;Name=SC9C5.35;gbkey=Gene;gene=SC9C5.35;gene_biotype=protein_coding;gene_synonym=SC9C5.35,SCL2.01;locus_tag=SCO1511
NC_003888.3	RefSeq	CDS	1615300	1616367	.	+	0	ID=cds1476;Parent=gene1500;Dbxref=Genbank:NP_733536.1,GeneID:1096937;Name=NP_733536.1;Note=SCL2.01%2C hypothetical protein (fragment)%2C len: >328 aa%3B similar to TR:O33236 (EMBL:Z98209) Mycobacterium tuberculosis hypothetical 49.8 kD protein MTCY174.11%2C len: 450 aa%3B fasta scores: opt: 843 z-score: 874.7 E(): 0%3B 45.9%25 identity in 296 aa overlap. Contains possible coiled-coils region~SC9C5.35%2C hypothetical protein (fragment)%2C len: >57 aa;gbkey=CDS;gene=SC9C5.35;product=hypothetical protein;protein_id=NP_733536.1;transl_table=11
NC_003888.3	RefSeq	gene	1616388	1616528	.	+	.	ID=gene1501;Dbxref=GeneID:1096938;Name=SCL2.02;gbkey=Gene;gene=SCL2.02;gene_biotype=protein_coding;gene_synonym=SCL2.02;locus_tag=SCO1512
NC_003888.3	RefSeq	CDS	1616388	1616528	.	+	0	ID=cds1477;Parent=gene1501;Dbxref=Genbank:NP_625791.1,GeneID:1096938;Name=NP_625791.1;Note=SCL2.02%2C unknown%2C len: 46 aa;gbkey=CDS;gene=SCL2.02;product=hypothetical protein;protein_id=NP_625791.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1616596	1619312	.	-	.	ID=id1932;Note=previously sequenced region SW:SCAPTRELA EMBL:X87267 S.coelicolor apt %26 relA genes;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1616607	1619150	.	-	.	ID=gene1502;Dbxref=GeneID:1096939;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;gene_synonym=relA,SCL2.03c;locus_tag=SCO1513
NC_003888.3	RefSeq	CDS	1616607	1619150	.	-	0	ID=cds1478;Parent=gene1502;Dbxref=Genbank:NP_625792.1,GeneID:1096939;Name=NP_625792.1;Note=SCL2.03c%2C relA%2C GTP pyrophosphokinase%2C len: 847 aa%3B identical to previously sequenced SW:RELA_STRCO (EMBL:X87267) Streptomyces coelicolor GTP pyrophosphokinase (EC 2.7.6.5) RelA%2C 847 aa and highly similar to SW:RELA_STRAT (EMBL:AF072829) Streptomyces antibioticus RelA protein%2C 841 aa%3B fasta scores: opt: 4969 z-score: 4906.2 E(): 0%3B 90.3%25 identity in 848 aa overlap and to SW:RELA_CORGL (EMBL:AF038651) Corynebacterium glutamicum GTP pyrophosphokinase (EC 2.7.6.5) RelA%2C 760 aa%3B fasta scores: opt: 1613 z-score: 1594.3 E(): 0%3B 58.7%25 identity in 774 aa overlap. Contains Pfam match to entry PF01842 ACT%2C ACT domain and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=NP_625792.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1616634	1616852	.	-	.	ID=id1933;Dbxref=GeneID:1096939;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 63.10%2C E-value 6e-15;gbkey=misc_feature;gene=relA
NC_003888.3	RefSeq	sequence_feature	1617756	1617779	.	-	.	ID=id1934;Dbxref=GeneID:1096939;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=relA
NC_003888.3	RefSeq	sequence_feature	1618651	1622838	.	-	.	ID=id1935;Note=previously sequenced region SW:SCSECAPT EMBL:X85969 S.coelicolor secD%2C secF %26 apt genes;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	1619156	1619159	.	-	.	ID=id1936;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	1619282	1619946	.	-	.	ID=id1937;Note=previously sequenced region SW:SCAPTRELA EMBL:X87267 S.coelicolor apt %26 relA genes;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1619334	1619831	.	-	.	ID=gene1503;Dbxref=GeneID:1096940;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;gene_synonym=apt,SCL2.06c;locus_tag=SCO1514
NC_003888.3	RefSeq	CDS	1619334	1619831	.	-	0	ID=cds1479;Parent=gene1503;Dbxref=Genbank:NP_625793.1,GeneID:1096940;Name=NP_625793.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=NP_625793.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1619358	1619807	.	-	.	ID=id1938;Dbxref=GeneID:1096940;Note=Pfam match to entry PF00156 Pribosyltran%2C Phosphoribosyl transferase domain%2C score 150.30%2C E-value 3.5e-41;gbkey=misc_feature;gene=apt
NC_003888.3	RefSeq	sequence_feature	1619481	1619519	.	-	.	ID=id1939;Dbxref=GeneID:1096940;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature;gbkey=misc_feature;gene=apt
NC_003888.3	RefSeq	stem_loop	1619846	1619881	.	-	.	ID=id1940;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1619879	1621000	.	-	.	ID=gene1504;Dbxref=GeneID:1096941;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;gene_synonym=SCL2.05c;locus_tag=SCO1515
NC_003888.3	RefSeq	CDS	1619879	1621000	.	-	0	ID=cds1480;Parent=gene1504;Dbxref=Genbank:NP_625794.1,GeneID:1096941;Name=NP_625794.1;Note=forms a complex with SecD and YajC%3B SecDFyajC stimulates the proton motive force-driven protein translocation%3B seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane%3B in some organisms%2C such as Bacillus subtilis%2C SecD is fused to SecF;gbkey=CDS;gene=secF;product=preprotein translocase subunit SecF;protein_id=NP_625794.1;transl_table=11
NC_003888.3	RefSeq	gene	1621004	1622716	.	-	.	ID=gene1505;Dbxref=GeneID:1096942;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;gene_synonym=SCL2.06c;locus_tag=SCO1516
NC_003888.3	RefSeq	CDS	1621004	1622716	.	-	0	ID=cds1481;Parent=gene1505;Dbxref=Genbank:NP_625795.1,GeneID:1096942;Name=NP_625795.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=NP_625795.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1621009	1621012	.	-	.	ID=id1941;Dbxref=GeneID:1096942;gbkey=RBS;gene=secD
NC_003888.3	RefSeq	gene	1622951	1623460	.	-	.	ID=gene1506;Dbxref=GeneID:1096943;Name=SCL2.07c;gbkey=Gene;gene=SCL2.07c;gene_biotype=protein_coding;gene_synonym=SCL2.07c;locus_tag=SCO1517
NC_003888.3	RefSeq	CDS	1622951	1623460	.	-	0	ID=cds1482;Parent=gene1506;Dbxref=Genbank:NP_625796.1,GeneID:1096943;Name=NP_625796.1;Note=SCL2.07c%2C possible hypothetical protein%2C len: 169 aa%3B similar to SW:YP88_MYCLE (EMBL:AL023591) Mycobacterium leprae hypothetical protein MCLB1259.04%2C 114 aa%3B fasta scores: opt: 205 z-score: 231.1 E(): 1.8e-05%3B 36.7%25 identity in 120 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCL2.07c;product=hypothetical protein;protein_id=NP_625796.1;transl_table=11
NC_003888.3	RefSeq	gene	1623636	1624709	.	-	.	ID=gene1507;Dbxref=GeneID:1096944;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;gene_synonym=SCL2.08c;locus_tag=SCO1518
NC_003888.3	RefSeq	CDS	1623636	1624709	.	-	0	ID=cds1483;Parent=gene1507;Dbxref=Genbank:NP_625797.1,GeneID:1096944;Name=NP_625797.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=NP_625797.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1624476	1624499	.	-	.	ID=id1942;Dbxref=GeneID:1096944;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ruvB
NC_003888.3	RefSeq	ribosome_entry_site	1624716	1624719	.	-	.	ID=id1943;gbkey=RBS
NC_003888.3	RefSeq	gene	1624756	1625361	.	-	.	ID=gene1508;Dbxref=GeneID:1096945;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;gene_synonym=SCL2.09c;locus_tag=SCO1519
NC_003888.3	RefSeq	CDS	1624756	1625361	.	-	0	ID=cds1484;Parent=gene1508;Dbxref=Genbank:NP_625798.1,GeneID:1096945;Name=NP_625798.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=NP_625798.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1624768	1625361	.	-	.	ID=id1944;Dbxref=GeneID:1096945;Note=Pfam match to entry PF01330 RuvA%2C Bacterial DNA recombination protein%2C RuvA%2C score 194.10%2C E-value 2.2e-54;gbkey=misc_feature;gene=ruvA
NC_003888.3	RefSeq	gene	1625358	1625924	.	-	.	ID=gene1509;Dbxref=GeneID:1096946;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;gene_synonym=SCL2.10c;locus_tag=SCO1520
NC_003888.3	RefSeq	CDS	1625358	1625924	.	-	0	ID=cds1485;Parent=gene1509;Dbxref=Genbank:NP_625799.1,GeneID:1096946;Name=NP_625799.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=Holliday junction resolvase;protein_id=NP_625799.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1625478	1625585	.	-	.	ID=id1945;Dbxref=GeneID:1096946;Note=PS01321 Crossover junction endodeoxyribonuclease ruvC signature;gbkey=misc_feature;gene=ruvC
NC_003888.3	RefSeq	gene	1626033	1626785	.	-	.	ID=gene1510;Dbxref=GeneID:1096947;Name=SCL2.11c;gbkey=Gene;gene=SCL2.11c;gene_biotype=protein_coding;gene_synonym=SCL2.11c;locus_tag=SCO1521
NC_003888.3	RefSeq	CDS	1626033	1626785	.	-	0	ID=cds1486;Parent=gene1510;Dbxref=Genbank:NP_625800.1,GeneID:1096947;Name=NP_625800.1;Note=SCL2.11c%2C hypothetical protein%2C len: 250 aa%3B similar to various hypothetical proteins%2C e.g. TR:YQ03_MYCTU (EMBL:Z98045) Mycobacterium tuberculosis hypothetical 26.8 kD protein RV2603c%2C 251 aa%3B fasta scores: opt: 1268 z-score: 1388.1 E(): 0%3B 76.7%25 identity in 249 aa overlap. Contains Pfam match to entry PF01709 DUF28%2C Domain of unknown function;gbkey=CDS;gene=SCL2.11c;product=hypothetical protein;protein_id=NP_625800.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1626069	1626773	.	-	.	ID=id1946;Dbxref=GeneID:1096947;Note=Pfam match to entry PF01709 DUF28%2C Domain of unknown function%2C score 429.60%2C E-value 2.8e-125;gbkey=misc_feature;gene=SCL2.11c
NC_003888.3	RefSeq	ribosome_entry_site	1626793	1626797	.	-	.	ID=id1947;gbkey=RBS
NC_003888.3	RefSeq	gene	1626835	1627443	.	-	.	ID=gene1511;Dbxref=GeneID:1096948;Name=SCL2.12c;gbkey=Gene;gene=SCL2.12c;gene_biotype=protein_coding;gene_synonym=SCL2.12c;locus_tag=SCO1522
NC_003888.3	RefSeq	CDS	1626835	1627443	.	-	0	ID=cds1487;Parent=gene1511;Dbxref=Genbank:NP_625801.1,GeneID:1096948;Name=NP_625801.1;Note=with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate%3B PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia%3B PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate;gbkey=CDS;gene=SCL2.12c;product=glutamine amidotransferase subunit PdxT;protein_id=NP_625801.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1626859	1627419	.	-	.	ID=id1948;Dbxref=GeneID:1096948;Note=Pfam match to entry PF01174 UPF0030%2C Uncharacterized protein family UPF0030%2C score 272.10%2C E-value 7.5e-78;gbkey=misc_feature;gene=SCL2.12c
NC_003888.3	RefSeq	gene	1627456	1628367	.	-	.	ID=gene1512;Dbxref=GeneID:1096949;Name=SCL2.13c;gbkey=Gene;gene=SCL2.13c;gene_biotype=protein_coding;gene_synonym=SCL2.13c;locus_tag=SCO1523
NC_003888.3	RefSeq	CDS	1627456	1628367	.	-	0	ID=cds1488;Parent=gene1512;Dbxref=Genbank:NP_625802.1,GeneID:1096949;Name=NP_625802.1;Note=with PdxT forms pyridoxal 5'-phosphate from glutamine%2C either ribose 5-phosphate or ribulose 5-phosphate%2C and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate;gbkey=CDS;gene=SCL2.13c;product=pyridoxal biosynthesis lyase PdxS;protein_id=NP_625802.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1627705	1628325	.	-	.	ID=id1949;Dbxref=GeneID:1096949;Note=Pfam match to entry PF01680 UPF0019%2C Uncharacterized protein family SNZ%2C score 421.70%2C E-value 6.7e-123;gbkey=misc_feature;gene=SCL2.13c
NC_003888.3	RefSeq	ribosome_entry_site	1628373	1628376	.	-	.	ID=id1950;gbkey=RBS
NC_003888.3	RefSeq	gene	1628479	1629021	.	-	.	ID=gene1513;Dbxref=GeneID:1096950;Name=SCL2.14c;gbkey=Gene;gene=SCL2.14c;gene_biotype=protein_coding;gene_synonym=SCL2.14c;locus_tag=SCO1524
NC_003888.3	RefSeq	CDS	1628479	1629021	.	-	0	ID=cds1489;Parent=gene1513;Dbxref=Genbank:NP_625803.1,GeneID:1096950;Name=NP_625803.1;Note=SCL2.14c%2C membrane protein%2C len: 180 aa%3B similar to TR:O06205 (EMBL:Z95387) Mycobacterium tuberculosis hypothetical 38.1 Kd protein MTCY1A10.24%2C 351 aa%3B fasta scores: opt: 179 z-score: 211.7 E(): 0.00021%3B 43.3%25 identity in 171 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCL2.14c;product=hypothetical protein;protein_id=NP_625803.1;transl_table=11
NC_003888.3	RefSeq	gene	1629081	1630244	.	-	.	ID=gene1514;Dbxref=GeneID:1096951;Name=SCL2.15c;gbkey=Gene;gene=SCL2.15c;gene_biotype=protein_coding;gene_synonym=SCL2.15c;locus_tag=SCO1525
NC_003888.3	RefSeq	CDS	1629081	1630244	.	-	0	ID=cds1490;Parent=gene1514;Dbxref=Genbank:NP_625804.1,GeneID:1096951;Name=NP_625804.1;Note=SCL2.15c%2C possible sugar transferase%2C len: 387 aa%3B similar to TR:O28546 (EMBL:AE000983) Archaeoglobus fulgidus galactosyltransferase%2C 356 aa%3B fasta scores: opt: 422 z-score: 488.7 E(): 7.9e-20%3B 26.9%25 identity in 375 aa overlap and to TR:O06204 (EMBL:Z95387) Mycobacterium tuberculosis hypothetical 40.4 Kd protein MTCY1A10.23%2C 378 aa%3B fasta scores: opt: 1216 z-score: 1400.3 E(): 0%3B 52.7%25 identity in 376 aa overlap. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1;gbkey=CDS;gene=SCL2.15c;product=sugar transferase;protein_id=NP_625804.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1629219	1629692	.	-	.	ID=id1951;Dbxref=GeneID:1096951;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 69.60%2C E-value 8.7e-19;gbkey=misc_feature;gene=SCL2.15c
NC_003888.3	RefSeq	gene	1630241	1631176	.	-	.	ID=gene1515;Dbxref=GeneID:1096952;Name=SCL2.16c;gbkey=Gene;gene=SCL2.16c;gene_biotype=protein_coding;gene_synonym=SCL2.16c;locus_tag=SCO1526
NC_003888.3	RefSeq	CDS	1630241	1631176	.	-	0	ID=cds1491;Parent=gene1515;Dbxref=Genbank:NP_625805.1,GeneID:1096952;Name=NP_625805.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;gene=SCL2.16c;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=NP_625805.1;transl_table=11
NC_003888.3	RefSeq	gene	1631173	1631898	.	-	.	ID=gene1516;Dbxref=GeneID:1096953;Name=SCL2.17c;gbkey=Gene;gene=SCL2.17c;gene_biotype=protein_coding;gene_synonym=SCL2.17c;locus_tag=SCO1527
NC_003888.3	RefSeq	CDS	1631173	1631898	.	-	0	ID=cds1492;Parent=gene1516;Dbxref=Genbank:NP_625806.1,GeneID:1096953;Name=NP_625806.1;Note=SCL2.17c%2C possible membrane transferase%2C len: 241 aa%3B similar to TR:CAB50482 (EMBL:AJ248288) Pyrococcus abyssi CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA%2C 186 aa%3B fasta scores: opt: 286 z-score: 350.3 E(): 4e-12%3B 33.0%25 identity in 203 aa overlap and to TR:O06202 (EMBL:Z95387) Mycobacterium tuberculosis hypothetical 23.3 kD protein MTCY1A10.21%2C 217 aa%3B fasta scores: opt: 564 z-score: 679.1 E(): 2e-30%3B 43.4%25 identity in 212 aa overlap. Contains Pfam match to entry PF01066 CDP-OH_P_transf%2C CDP-alcohol phosphatidyltransferase and match to Prosite entry PS00379 CDP-alcohol phosphatidyltransferases signature. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL2.17c;product=membrane transferase;protein_id=NP_625806.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1631184	1631187	.	-	.	ID=id1952;Dbxref=GeneID:1096953;gbkey=RBS;gene=SCL2.17c
NC_003888.3	RefSeq	sequence_feature	1631230	1631676	.	-	.	ID=id1953;Dbxref=GeneID:1096953;Note=Pfam match to entry PF01066 CDP-OH_P_transf%2C CDP-alcohol phosphatidyltransferase%2C score 51.90%2C E-value 1.5e-11;gbkey=misc_feature;gene=SCL2.17c
NC_003888.3	RefSeq	sequence_feature	1631569	1631637	.	-	.	ID=id1954;Dbxref=GeneID:1096953;Note=PS00379 CDP-alcohol phosphatidyltransferases signature;gbkey=misc_feature;gene=SCL2.17c
NC_003888.3	RefSeq	ribosome_entry_site	1632094	1632098	.	+	.	ID=id1955;gbkey=RBS
NC_003888.3	RefSeq	gene	1632106	1634304	.	+	.	ID=gene1517;Dbxref=GeneID:1096954;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;gene_synonym=fusA;locus_tag=SCO1528
NC_003888.3	RefSeq	CDS	1632106	1634304	.	+	0	ID=cds1493;Parent=gene1517;Dbxref=Genbank:NP_625807.1,GeneID:1096954;Name=NP_625807.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=NP_625807.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1632169	1633677	.	+	.	ID=id1956;Dbxref=GeneID:1096954;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family%2C score 158.30%2C E-value 1.4e-43;gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	1632196	1632219	.	+	.	ID=id1957;Dbxref=GeneID:1096954;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	1633747	1634265	.	+	.	ID=id1958;Dbxref=GeneID:1096954;Note=Pfam match to entry PF00679 EFG_C%2C Elongation factor G C-terminus%2C score 202.30%2C E-value 7.3e-57;gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	gene	1634572	1636227	.	+	.	ID=gene1518;Dbxref=GeneID:1096955;Name=SCL2.19;gbkey=Gene;gene=SCL2.19;gene_biotype=protein_coding;gene_synonym=SCL2.19;locus_tag=SCO1529
NC_003888.3	RefSeq	CDS	1634572	1636227	.	+	0	ID=cds1494;Parent=gene1518;Dbxref=Genbank:NP_625808.1,GeneID:1096955;Name=NP_625808.1;Note=SCL2.19%2C possible membrane protein%2C len: 551 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL2.19;product=hypothetical protein;protein_id=NP_625808.1;transl_table=11
NC_003888.3	RefSeq	gene	1636316	1636876	.	-	.	ID=gene1519;Dbxref=GeneID:1096956;Name=SCL2.20c;gbkey=Gene;gene=SCL2.20c;gene_biotype=protein_coding;gene_synonym=SCL2.20c;locus_tag=SCO1530
NC_003888.3	RefSeq	CDS	1636316	1636876	.	-	0	ID=cds1495;Parent=gene1519;Dbxref=Genbank:NP_625809.1,GeneID:1096956;Name=NP_625809.1;Note=SCL2.20c%2C hypothetical HIT family protein%2C len: 186 aa%3B similar to TR:O06201 (EMBL:Z95387) Mycobacterium tuberculosis hypothetical 21.8 kD protein MTCY01A10.20A%2C 195 aa%3B fasta scores: opt: 638 z-score: 762.0 E(): 0%3B 52.8%25 identity in 176 aa overlap and to TR:CAB48988 (EMBL:AJ248283) Pyrococcus abyssi HIT family protein%2C 185 aa%3B fasta scores: opt: 498 z-score: 597.6 E(): 6.8e-26%3B 45.1%25 identity in 164 aa overlap. similar also to TR:Q9F7Z0 (EMBL:AF265558) Mycobacterium smegmatis hypothetical protein 205 aa%3B fasta scores: opt: 653 Z-score: 762.7 E(): 7.5e-35%3B 52.432%25 identity in 185 aa overlap. Contains Pfam match to entry PF01230 HIT%2C HIT family;gbkey=CDS;gene=SCL2.20c;product=hypothetical protein;protein_id=NP_625809.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1636436	1636747	.	-	.	ID=id1959;Dbxref=GeneID:1096956;Note=Pfam match to entry PF01230 HIT%2C HIT family%2C score 33.70%2C E-value 1.2e-07;gbkey=misc_feature;gene=SCL2.20c
NC_003888.3	RefSeq	gene	1636966	1638942	.	-	.	ID=gene1520;Dbxref=GeneID:1096957;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;gene_synonym=SCL2.21c;locus_tag=SCO1531
NC_003888.3	RefSeq	CDS	1636966	1638942	.	-	0	ID=cds1496;Parent=gene1520;Dbxref=Genbank:NP_625810.1,GeneID:1096957;Name=NP_625810.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=NP_625810.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1637032	1638177	.	-	.	ID=id1960;Dbxref=GeneID:1096957;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetases class II (G%2C H%2C P and S)%2C score 278.90%2C E-value 6.3e-80;gbkey=misc_feature;gene=thrS
NC_003888.3	RefSeq	sequence_feature	1637311	1637340	.	-	.	ID=id1961;Dbxref=GeneID:1096957;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2;gbkey=misc_feature;gene=thrS
NC_003888.3	RefSeq	sequence_feature	1637737	1637802	.	-	.	ID=id1962;Dbxref=GeneID:1096957;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1;gbkey=misc_feature;gene=thrS
NC_003888.3	RefSeq	ribosome_entry_site	1638947	1638952	.	-	.	ID=id1963;gbkey=RBS
NC_003888.3	RefSeq	gene	1639131	1640408	.	-	.	ID=gene1521;Dbxref=GeneID:1096958;Name=SCL2.22c;gbkey=Gene;gene=SCL2.22c;gene_biotype=protein_coding;gene_synonym=SCL2.22c;locus_tag=SCO1532
NC_003888.3	RefSeq	CDS	1639131	1640408	.	-	0	ID=cds1497;Parent=gene1521;Dbxref=Genbank:NP_625811.1,GeneID:1096958;Name=NP_625811.1;Note=SCL2.22c%2C hypothetical protein%2C len: 425 aa%3B similar to TR:Q9X4H6 (EMBL:AF110772) Streptomyces aureofaciens aldehyde dehydrogenase AldA%2C 467 aa%3B fasta scores: opt: 156 z-score: 162.9 E(): 0.11%3B 29.0%25 identity in 328 aa overlap;gbkey=CDS;gene=SCL2.22c;product=hypothetical protein;protein_id=NP_625811.1;transl_table=11
NC_003888.3	RefSeq	gene	1640405	1640971	.	-	.	ID=gene1522;Dbxref=GeneID:1096959;Name=SCL2.23c;gbkey=Gene;gene=SCL2.23c;gene_biotype=protein_coding;gene_synonym=SCL2.23c;locus_tag=SCO1533
NC_003888.3	RefSeq	CDS	1640405	1640971	.	-	0	ID=cds1498;Parent=gene1522;Dbxref=Genbank:NP_625812.1,GeneID:1096959;Name=NP_625812.1;Note=SCL2.23c%2C unknown%2C len: 188 aa;gbkey=CDS;gene=SCL2.23c;product=hypothetical protein;protein_id=NP_625812.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1640415	1640419	.	-	.	ID=id1964;Dbxref=GeneID:1096959;gbkey=RBS;gene=SCL2.23c
NC_003888.3	RefSeq	ribosome_entry_site	1641126	1641131	.	+	.	ID=id1965;gbkey=RBS
NC_003888.3	RefSeq	gene	1641143	1641868	.	+	.	ID=gene1523;Dbxref=GeneID:1096960;Name=SCL2.24;gbkey=Gene;gene=SCL2.24;gene_biotype=protein_coding;gene_synonym=SCL2.24;locus_tag=SCO1534
NC_003888.3	RefSeq	CDS	1641143	1641868	.	+	0	ID=cds1499;Parent=gene1523;Dbxref=Genbank:NP_625813.1,GeneID:1096960;Name=NP_625813.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;gene=SCL2.24;product=DNA polymerase III subunit epsilon;protein_id=NP_625813.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1641164	1641718	.	+	.	ID=id1966;Dbxref=GeneID:1096960;Note=Pfam match to entry PF00929 Exonuclease%2C Exonuclease%2C score 15.60%2C E-value 6.2e-05;gbkey=misc_feature;gene=SCL2.24
NC_003888.3	RefSeq	gene	1641943	1642017	.	-	.	ID=gene1524;Dbxref=GeneID:3240006;Name=SCOt01;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt01
NC_003888.3	RefSeq	tRNA	1641943	1642017	.	-	.	ID=rna3;Parent=gene1524;Dbxref=GeneID:3240006;Note=tRNA Val anticodon CAC%2C Cove score 81.33;gbkey=tRNA;product=tRNA-Val
NC_003888.3	RefSeq	exon	1641943	1642017	.	-	.	ID=id1967;Parent=rna3;Dbxref=GeneID:3240006;Note=tRNA Val anticodon CAC%2C Cove score 81.33;gbkey=tRNA;product=tRNA-Val
NC_003888.3	RefSeq	sequence_feature	1642009	1642011	.	-	.	ID=id1968;Dbxref=GeneID:3240006;Note=TTA Leucine codon. Possible target for bldA regulation;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1642057	1642515	.	-	.	ID=gene1525;Dbxref=GeneID:1096961;Name=SCL2.25c;gbkey=Gene;gene=SCL2.25c;gene_biotype=protein_coding;gene_synonym=SCL2.25c;locus_tag=SCO1535
NC_003888.3	RefSeq	CDS	1642057	1642515	.	-	0	ID=cds1500;Parent=gene1525;Dbxref=Genbank:NP_625814.1,GeneID:1096961;Name=NP_625814.1;Note=SCL2.25c%2C unknown%2C len: 152 aa;gbkey=CDS;gene=SCL2.25c;product=hypothetical protein;protein_id=NP_625814.1;transl_table=11
NC_003888.3	RefSeq	gene	1642555	1645023	.	-	.	ID=gene1526;Dbxref=GeneID:1096962;Name=SCL2.26c;gbkey=Gene;gene=SCL2.26c;gene_biotype=protein_coding;gene_synonym=SCL2.26c;locus_tag=SCO1536
NC_003888.3	RefSeq	CDS	1642555	1645023	.	-	0	ID=cds1501;Parent=gene1526;Dbxref=Genbank:NP_625815.1,GeneID:1096962;Name=NP_625815.1;Note=SCL2.26c%2C hypothetical protein%2C len: 822 aa%3B similar to TR:O31530 (EMBL:Z99107) Bacillus subtilis YetA PROTEIN%2C 857 aa%3B fasta scores: opt: 982 z-score: 1078.1 E(): 0%3B 35.1%25 identity in 840 aa overlap;gbkey=CDS;gene=SCL2.26c;product=hypothetical protein;protein_id=NP_625815.1;transl_table=11
NC_003888.3	RefSeq	gene	1645999	1646910	.	-	.	ID=gene1527;Dbxref=GeneID:1096963;Name=SCL2.27c;gbkey=Gene;gene=SCL2.27c;gene_biotype=protein_coding;gene_synonym=SCL2.27c;locus_tag=SCO1537
NC_003888.3	RefSeq	CDS	1645999	1646910	.	-	0	ID=cds1502;Parent=gene1527;Dbxref=Genbank:NP_625816.1,GeneID:1096963;Name=NP_625816.1;Note=SCL2.27c%2C probable transport system membrane protein%2C len: 303 aa%3B similar to SW:YESQ_BACSU (EMBL:Z99107) Bacillus subtilis probable ABC transporter permease YesQ%2C 296 aa%3B fasta scores:opt: 868 z-score: 1048.4 E(): 0%3B 45.1%25 identity in 295 aa overlap and to TR:CAB59597 (EMBL:AL132662) Streptomyces coelicolor probable sugar transport inner membrane protein SCF11.20%2C 299 aa%3B fasta scores: opt: 636 z-score: 769.8 E(): 0%3B 37.7%25 identity in 308 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL2.27c;product=transport system membrane protein;protein_id=NP_625816.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1646122	1646355	.	-	.	ID=id1969;Dbxref=GeneID:1096963;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 71.80%2C E-value 1.4e-17;gbkey=misc_feature;gene=SCL2.27c
NC_003888.3	RefSeq	sequence_feature	1646266	1646352	.	-	.	ID=id1970;Dbxref=GeneID:1096963;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCL2.27c
NC_003888.3	RefSeq	gene	1646907	1647893	.	-	.	ID=gene1528;Dbxref=GeneID:1096964;Name=SCL2.28c;gbkey=Gene;gene=SCL2.28c;gene_biotype=protein_coding;gene_synonym=SCL2.28c;locus_tag=SCO1538
NC_003888.3	RefSeq	CDS	1646907	1647893	.	-	0	ID=cds1503;Parent=gene1528;Dbxref=Genbank:NP_625817.1,GeneID:1096964;Name=NP_625817.1;Note=SCL2.28c%2C probable transport system membrane protein%2C len: 328 aa%3B similar to SW:YESP_BACSU (EMBL:Z99107) Bacillus subtilis probable ABC transporter permease YesP%2C 309 aa%3B fasta scores: opt: 1013 z-score: 1146.0 E(): 0%3B 48.8%25 identity in 301 aa overlap and to TR:CAB59596 (EMBL:AL132662) Streptomyces coelicolor probable sugar transporter inner membrane protein SCF11.19%2C 316 aa%3B fasta scores: opt: 608 z-score: 690.8 E(): 4.4e-31%3B 32.8%25 identity in 320 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL2.28c;product=transport system membrane protein;protein_id=NP_625817.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1646918	1646923	.	-	.	ID=id1971;Dbxref=GeneID:1096964;gbkey=RBS;gene=SCL2.28c
NC_003888.3	RefSeq	sequence_feature	1647048	1647284	.	-	.	ID=id1972;Dbxref=GeneID:1096964;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 65.10%2C E-value 1.5e-15;gbkey=misc_feature;gene=SCL2.28c
NC_003888.3	RefSeq	sequence_feature	1647195	1647281	.	-	.	ID=id1973;Dbxref=GeneID:1096964;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCL2.28c
NC_003888.3	RefSeq	ribosome_entry_site	1647898	1647901	.	-	.	ID=id1974;gbkey=RBS
NC_003888.3	RefSeq	gene	1647905	1649206	.	-	.	ID=gene1529;Dbxref=GeneID:1096965;Name=SCL2.29c;gbkey=Gene;gene=SCL2.29c;gene_biotype=protein_coding;gene_synonym=SCL2.29c;locus_tag=SCO1539
NC_003888.3	RefSeq	CDS	1647905	1649206	.	-	0	ID=cds1504;Parent=gene1529;Dbxref=Genbank:NP_625818.1,GeneID:1096965;Name=NP_625818.1;Note=SCL2.29c%2C possible hypothetical protein%2C len: 433 aa%3B similar to TR:O31518 (EMBL:Z99107) Bacillus subtilis YesO protein%2C 412 aa%3B fasta scores: opt: 606 z-score: 680.7 E(): 1.7e-30%3B 27.7%25 identity in 411 aa overlap and to TR:CAB59595 (EMBL:AL132662) Streptomyces coelicolor probable sugar transporter sugar binding lipoprotein SCF11.18%2C 442 aa%3B fasta scores: opt: 312 z-score: 352.1 E(): 3.4e-12%3B 24.4%25 identity in 454 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains N-terminal region signal peptide sequence;gbkey=CDS;gene=SCL2.29c;product=lipoprotein;protein_id=NP_625818.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1647920	1648759	.	-	.	ID=id1975;Dbxref=GeneID:1096965;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 61.70%2C E-value 1.5e-14;gbkey=misc_feature;gene=SCL2.29c
NC_003888.3	RefSeq	sequence_feature	1649099	1649131	.	-	.	ID=id1976;Dbxref=GeneID:1096965;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCL2.29c
NC_003888.3	RefSeq	ribosome_entry_site	1649212	1649216	.	-	.	ID=id1977;gbkey=RBS
NC_003888.3	RefSeq	gene	1649559	1649633	.	-	.	ID=gene1530;Dbxref=GeneID:3240007;Name=SCOt02;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt02
NC_003888.3	RefSeq	tRNA	1649559	1649633	.	-	.	ID=rna4;Parent=gene1530;Dbxref=GeneID:3240007;Note=tRNA Val anticodon CAC%2C Cove score 81.33;gbkey=tRNA;product=tRNA-Val
NC_003888.3	RefSeq	exon	1649559	1649633	.	-	.	ID=id1978;Parent=rna4;Dbxref=GeneID:3240007;Note=tRNA Val anticodon CAC%2C Cove score 81.33;gbkey=tRNA;product=tRNA-Val
NC_003888.3	RefSeq	gene	1649733	1650185	.	-	.	ID=gene1531;Dbxref=GeneID:1096966;Name=SCL2.30c;gbkey=Gene;gene=SCL2.30c;gene_biotype=protein_coding;gene_synonym=SCL2.30c;locus_tag=SCO1540
NC_003888.3	RefSeq	CDS	1649733	1650185	.	-	0	ID=cds1505;Parent=gene1531;Dbxref=Genbank:NP_625819.1,GeneID:1096966;Name=NP_625819.1;Note=SCL2.30c%2C possible membrane protein%2C len: 150 aa%3B similar to SW:YAIZ_ECOLI (EMBL:AE000144) Escherichia coli hypothetical 13.0 kD protein YaiZ%2C 114 aa%3B fasta scores: opt: 121 z-score: 164.5 E(): 0.09%3B 31.0%25 identity in 71 aa overlap and to TR:CAB53332 (EMBL:AL109974) Streptomyces coelicolor membrane protein SCF34.21%2C 144 aa%3B fasta scores: opt: 117 z-score: 158.1 E(): 0.21%3B 23.9%25 identity in 92 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL2.30c;product=hypothetical protein;protein_id=NP_625819.1;transl_table=11
NC_003888.3	RefSeq	gene	1650311	1650790	.	+	.	ID=gene1532;Dbxref=GeneID:1096967;Name=SCL2.31;gbkey=Gene;gene=SCL2.31;gene_biotype=protein_coding;gene_synonym=SCL2.31;locus_tag=SCO1541
NC_003888.3	RefSeq	CDS	1650311	1650790	.	+	0	ID=cds1506;Parent=gene1532;Dbxref=Genbank:NP_625820.1,GeneID:1096967;Name=NP_625820.1;Note=SCL2.31%2C probable regulator%2C len: 159 aa%3B similar to various Streptomyces regulatory proteins%2C e.g. TR:CAB51005 (EMBL:AL096852) Streptomyces coelicolor regulator SCE19A.24%2C 142 aa%3B fasta scores: opt: 503 z-score: 661.7 E(): 1.8e-29%3B 57.9%25 identity in 133 aa overlap and TR:P95753 (EMBL:D50051) Streptomyces griseus SsgA%2C 136 aa%3B fasta scores: opt: 326 z-score: 433.9 E(): 8.9e-17%3B 43.1%25 identity in 130 aa overlap;gbkey=CDS;gene=SCL2.31;product=regulator;protein_id=NP_625820.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1651060	1651063	.	+	.	ID=id1979;gbkey=RBS
NC_003888.3	RefSeq	gene	1651070	1651630	.	+	.	ID=gene1533;Dbxref=GeneID:1096968;Name=SCL2.32;gbkey=Gene;gene=SCL2.32;gene_biotype=protein_coding;gene_synonym=SCL2.32;locus_tag=SCO1542
NC_003888.3	RefSeq	CDS	1651070	1651630	.	+	0	ID=cds1507;Parent=gene1533;Dbxref=Genbank:NP_625821.1,GeneID:1096968;Name=NP_625821.1;Note=SCL2.32%2C hypothetical protein%2C len: 186 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB59700 (EMBL:AL132707) Streptomyces coelicolor hypothetical 21.7 kD protein SCF51.02c%2C 205 aa%3B fasta scores: opt: 188 z-score: 240.3 E(): 5.4e-06%3B 31.1%25 identity in 180 aa overlap;gbkey=CDS;gene=SCL2.32;product=hypothetical protein;protein_id=NP_625821.1;transl_table=11
NC_003888.3	RefSeq	gene	1652074	1652535	.	-	.	ID=gene1534;Dbxref=GeneID:1096969;Name=SCL2.33c;gbkey=Gene;gene=SCL2.33c;gene_biotype=protein_coding;gene_synonym=SCL2.33c;locus_tag=SCO1543
NC_003888.3	RefSeq	CDS	1652074	1652535	.	-	0	ID=cds1508;Parent=gene1534;Dbxref=Genbank:NP_625822.1,GeneID:1096969;Name=NP_625822.1;Note=SCL2.33c%2C membrane protein%2C len: 153 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL2.33c;product=hypothetical protein;protein_id=NP_625822.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1652540	1652545	.	-	.	ID=id1980;gbkey=RBS
NC_003888.3	RefSeq	gene	1652664	1653251	.	+	.	ID=gene1535;Dbxref=GeneID:1096970;Name=SCL2.34;gbkey=Gene;gene=SCL2.34;gene_biotype=protein_coding;gene_synonym=SCL2.34;locus_tag=SCO1544
NC_003888.3	RefSeq	CDS	1652664	1653251	.	+	0	ID=cds1509;Parent=gene1535;Dbxref=Genbank:NP_625823.1,GeneID:1096970;Name=NP_625823.1;Note=SCL2.34%2C hypothetical protein%2C len: 195 aa%3B similar to TR:AAF10140 (EMBL:AE001914) Deinococcus radiodurans conserved hypothetical protein DR0560%2C 376 aa%3B fasta scores: opt: 248 z-score: 296.3 E(): 4.1e-09%3B 37.6%25 identity in 149 aa overlap;gbkey=CDS;gene=SCL2.34;product=hypothetical protein;protein_id=NP_625823.1;transl_table=11
NC_003888.3	RefSeq	gene	1653340	1654167	.	-	.	ID=gene1536;Dbxref=GeneID:1096971;Name=SCL11.01c;gbkey=Gene;gene=SCL11.01c;gene_biotype=protein_coding;gene_synonym=SCL11.01c,SCL2.35c;locus_tag=SCO1545
NC_003888.3	RefSeq	CDS	1653340	1654167	.	-	0	ID=cds1510;Parent=gene1536;Dbxref=Genbank:NP_733537.1,GeneID:1096971;Name=NP_733537.1;Note=SCL11.01c%2C possible acetyltransferase%2C len: >81 aa%3B C-terminal part of TR:CAB70947 (EMBL:AL137778) S. coelicolor cosmid SCL2.35c acetyltransferase~SCL2.35c%2C possible acetyltransferase (partial)%2C len: >225 aa%3B similar to TR:CAB50578 (EMBL:AJ248288) Pyrococcus abyssi N-terminal acetyltransferase%2C 172 aa%3B fasta scores: opt: 164 z-score: 202.4 E(): 0.0007%3B 36.0%25 identity in 89 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCL11.01c;product=acetyltransferase;protein_id=NP_733537.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1653376	1653783	.	-	.	ID=id1981;Dbxref=GeneID:1096971;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 57.10%2C E-value 3.8e-13;gbkey=misc_feature;gene=SCL11.01c
NC_003888.3	RefSeq	gene	1654295	1655116	.	-	.	ID=gene1537;Dbxref=GeneID:1096972;Name=SCL11.02c;gbkey=Gene;gene=SCL11.02c;gene_biotype=protein_coding;gene_synonym=SCL11.02c;locus_tag=SCO1546
NC_003888.3	RefSeq	CDS	1654295	1655116	.	-	0	ID=cds1511;Parent=gene1537;Dbxref=Genbank:NP_625824.1,GeneID:1096972;Name=NP_625824.1;Note=SCL11.02c%2C probable aminotransferase%2C len: 273 aa%3B similar to SW:DAAA_BACSU (EMBL:)Y14082 Bacillus subtilis D-alanine aminotransferase (EC 2.6.1.21) Dat%2C 282 aa%3B fasta scores: opt: 347 z-score: 415.1 E(): 1.1e-15%3B 28.5%25 identity in 274 aa overlap. Contains Pfam match to entry PF01063 aminotran_4%2C Aminotransferase class IV and match to Prosite entry PS00770 Aminotransferases class-IV signature;gbkey=CDS;gene=SCL11.02c;product=4-amino-4-deoxychorismate lyase;protein_id=NP_625824.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1654325	1655101	.	-	.	ID=id1982;Dbxref=GeneID:1096972;Note=Pfam match to entry PF01063 aminotran_4%2C Aminotransferase class IV%2C score 138.90%2C E-value 9.1e-38;gbkey=misc_feature;gene=SCL11.02c
NC_003888.3	RefSeq	sequence_feature	1654508	1654597	.	-	.	ID=id1983;Dbxref=GeneID:1096972;Note=PS00770 Aminotransferases class-IV signature;gbkey=misc_feature;gene=SCL11.02c
NC_003888.3	RefSeq	gene	1655113	1656174	.	-	.	ID=gene1538;Dbxref=GeneID:1096973;Name=SCL11.03c;gbkey=Gene;gene=SCL11.03c;gene_biotype=protein_coding;gene_synonym=SCL11.03c;locus_tag=SCO1547
NC_003888.3	RefSeq	CDS	1655113	1656174	.	-	0	ID=cds1512;Parent=gene1538;Dbxref=Genbank:NP_625825.1,GeneID:1096973;Name=NP_625825.1;Note=SCL11.03c%2C possible anthranilate synthase%2C len: 353 aa%3B similar to SW:TRPE_THEMA (EMBL:X74075) Thermotoga maritima Anthranilate synthase component I (EC 4.1.3.27) TrpE%2C 457 aa%3B fasta scores: opt: 459 z-score: 510.1 E(): 5.4e-21%3B 37.2%25 identity in 285 aa overlap. Contains Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme;gbkey=CDS;gene=SCL11.03c;product=anthranilate synthase;protein_id=NP_625825.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1655127	1655130	.	-	.	ID=id1984;Dbxref=GeneID:1096973;gbkey=RBS;gene=SCL11.03c
NC_003888.3	RefSeq	sequence_feature	1655164	1655943	.	-	.	ID=id1985;Dbxref=GeneID:1096973;Note=Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme%2C score 248.10%2C E-value 4.2e-71;gbkey=misc_feature;gene=SCL11.03c
NC_003888.3	RefSeq	gene	1656352	1656424	.	+	.	ID=gene1539;Dbxref=GeneID:1096974;Name=glyUa;gbkey=Gene;gene=glyUa;gene_biotype=tRNA;locus_tag=SCOt03
NC_003888.3	RefSeq	tRNA	1656352	1656424	.	+	.	ID=rna5;Parent=gene1539;Dbxref=GeneID:1096974;Note=tRNA Gly anticodon GCC%2C Cove score 84.38;gbkey=tRNA;gene=glyUa;product=tRNA-Gly
NC_003888.3	RefSeq	exon	1656352	1656424	.	+	.	ID=id1986;Parent=rna5;Dbxref=GeneID:1096974;Note=tRNA Gly anticodon GCC%2C Cove score 84.38;gbkey=tRNA;gene=glyUa;product=tRNA-Gly
NC_003888.3	RefSeq	gene	1656463	1656536	.	+	.	ID=gene1540;Dbxref=GeneID:1096975;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=tRNA;locus_tag=SCOt04
NC_003888.3	RefSeq	tRNA	1656463	1656536	.	+	.	ID=rna6;Parent=gene1540;Dbxref=GeneID:1096975;Note=tRNA Cys anticodon GCA%2C Cove score 72.46;gbkey=tRNA;gene=cysT;product=tRNA-Cys
NC_003888.3	RefSeq	exon	1656463	1656536	.	+	.	ID=id1987;Parent=rna6;Dbxref=GeneID:1096975;Note=tRNA Cys anticodon GCA%2C Cove score 72.46;gbkey=tRNA;gene=cysT;product=tRNA-Cys
NC_003888.3	RefSeq	gene	1656538	1656609	.	+	.	ID=gene1541;Dbxref=GeneID:1096976;Name=vala;gbkey=Gene;gene=vala;gene_biotype=tRNA;locus_tag=SCOt05
NC_003888.3	RefSeq	tRNA	1656538	1656609	.	+	.	ID=rna7;Parent=gene1541;Dbxref=GeneID:1096976;Note=tRNA Val anticodon GAC%2C Cove score 79.08;gbkey=tRNA;gene=vala;product=tRNA-Val
NC_003888.3	RefSeq	exon	1656538	1656609	.	+	.	ID=id1988;Parent=rna7;Dbxref=GeneID:1096976;Note=tRNA Val anticodon GAC%2C Cove score 79.08;gbkey=tRNA;gene=vala;product=tRNA-Val
NC_003888.3	RefSeq	gene	1656646	1656717	.	+	.	ID=gene1542;Dbxref=GeneID:1096977;Name=valb;gbkey=Gene;gene=valb;gene_biotype=tRNA;locus_tag=SCOt06
NC_003888.3	RefSeq	tRNA	1656646	1656717	.	+	.	ID=rna8;Parent=gene1542;Dbxref=GeneID:1096977;Note=tRNA Val anticodon GAC%2C Cove score 79.59;gbkey=tRNA;gene=valb;product=tRNA-Val
NC_003888.3	RefSeq	exon	1656646	1656717	.	+	.	ID=id1989;Parent=rna8;Dbxref=GeneID:1096977;Note=tRNA Val anticodon GAC%2C Cove score 79.59;gbkey=tRNA;gene=valb;product=tRNA-Val
NC_003888.3	RefSeq	gene	1656743	1656814	.	+	.	ID=gene1543;Dbxref=GeneID:1096978;Name=valg;gbkey=Gene;gene=valg;gene_biotype=tRNA;locus_tag=SCOt07
NC_003888.3	RefSeq	tRNA	1656743	1656814	.	+	.	ID=rna9;Parent=gene1543;Dbxref=GeneID:1096978;Note=tRNA Val anticodon GAC%2C Cove score 79.08;gbkey=tRNA;gene=valg;product=tRNA-Val
NC_003888.3	RefSeq	exon	1656743	1656814	.	+	.	ID=id1990;Parent=rna9;Dbxref=GeneID:1096978;Note=tRNA Val anticodon GAC%2C Cove score 79.08;gbkey=tRNA;gene=valg;product=tRNA-Val
NC_003888.3	RefSeq	stem_loop	1656821	1656859	.	-	.	ID=id1991;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1656870	1657130	.	-	.	ID=gene1544;Dbxref=GeneID:1096979;Name=SCL11.04c;gbkey=Gene;gene=SCL11.04c;gene_biotype=protein_coding;gene_synonym=SCL11.04c;locus_tag=SCO1548
NC_003888.3	RefSeq	CDS	1656870	1657130	.	-	0	ID=cds1513;Parent=gene1544;Dbxref=Genbank:NP_625826.1,GeneID:1096979;Name=NP_625826.1;Note=SCL11.04c%2C unknown%2C len: 86 aa;gbkey=CDS;gene=SCL11.04c;product=hypothetical protein;protein_id=NP_625826.1;transl_table=11
NC_003888.3	RefSeq	gene	1657259	1658197	.	-	.	ID=gene1545;Dbxref=GeneID:1096980;Name=SCL11.05c;gbkey=Gene;gene=SCL11.05c;gene_biotype=protein_coding;gene_synonym=SCL11.05c;locus_tag=SCO1549
NC_003888.3	RefSeq	CDS	1657259	1658197	.	-	0	ID=cds1514;Parent=gene1545;Dbxref=Genbank:NP_625827.1,GeneID:1096980;Name=NP_625827.1;Note=SCL11.05c%2C hypothetical protein%2C len: 312 aa%3B similar to TR:O33744 (EMBL:Y10293) Streptomyces sp. hypothetical 33.8 kD protein 312 aa%3B fasta scores: opt: 206 z-score: 221.9 E(): 6.1e-05%3B 29.7%25 identity in 273 aa overlap;gbkey=CDS;gene=SCL11.05c;product=hypothetical protein;protein_id=NP_625827.1;transl_table=11
NC_003888.3	RefSeq	gene	1658389	1658571	.	-	.	ID=gene1546;Dbxref=GeneID:1096981;Name=SCL11.06c;gbkey=Gene;gene=SCL11.06c;gene_biotype=protein_coding;gene_synonym=SCL11.06c;locus_tag=SCO1550
NC_003888.3	RefSeq	CDS	1658389	1658571	.	-	0	ID=cds1515;Parent=gene1546;Dbxref=Genbank:NP_625828.1,GeneID:1096981;Name=NP_625828.1;Note=SCL11.06c%2C possible small membrane protein%2C len: 60 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL11.06c;product=small membrane protein;protein_id=NP_625828.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1658576	1658582	.	-	.	ID=id1992;gbkey=RBS
NC_003888.3	RefSeq	gene	1659144	1660625	.	+	.	ID=gene1547;Dbxref=GeneID:1096982;Name=SCL11.07;gbkey=Gene;gene=SCL11.07;gene_biotype=protein_coding;gene_synonym=SCL11.07;locus_tag=SCO1551
NC_003888.3	RefSeq	CDS	1659144	1660625	.	+	0	ID=cds1516;Parent=gene1547;Dbxref=Genbank:NP_625829.1,GeneID:1096982;Name=NP_625829.1;Note=SCL11.07%2C possible eukaryotic-type protein kinase%2C len: 493 aa%3B similar to TR:Q9ZN80 (EMBL:AB021679) Streptomyces coelicolor PkaG%2C 592 aa%3B fasta scores: opt: 926 z-score: 659.3 E(): 2.6e-29%3B 41.0%25 identity in 417 aa overlap and N-terminal region similar to SW:AFSK_STRGR0 (EMBL:D45246) Streptomyces griseus Ser/Thr protein kinase AfsK (EC 2.7.1.-) 807 aa%3B fasta scores: opt: 871 z-score: 619.6 E(): 4.3e-27%3B 39.3%25 identity in 435 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature. Contains possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=SCL11.07;product=protein kinase;protein_id=NP_625829.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1659228	1659962	.	+	.	ID=id1993;Dbxref=GeneID:1096982;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 154.40%2C E-value 2e-42;gbkey=misc_feature;gene=SCL11.07
NC_003888.3	RefSeq	sequence_feature	1659246	1659314	.	+	.	ID=id1994;Dbxref=GeneID:1096982;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCL11.07
NC_003888.3	RefSeq	sequence_feature	1659582	1659620	.	+	.	ID=id1995;Dbxref=GeneID:1096982;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SCL11.07
NC_003888.3	RefSeq	gene	1660653	1661471	.	-	.	ID=gene1548;Dbxref=GeneID:1096983;Name=SCL11.08c;gbkey=Gene;gene=SCL11.08c;gene_biotype=protein_coding;gene_synonym=SCL11.08c;locus_tag=SCO1552
NC_003888.3	RefSeq	CDS	1660653	1661471	.	-	0	ID=cds1517;Parent=gene1548;Dbxref=Genbank:NP_625830.1,GeneID:1096983;Name=NP_625830.1;Note=SCL11.08c%2C probable rRNA methylase%2C len: 272 aa%3B similar to SW:Y881_MYCTU (EMBL:Z73101) Mycobacterium tuberculosis hypothetical tRNA/rRNA methyltransferase RV0881 (EC 2.1.1.-)%2C 288 aa%3B fasta scores: opt: 726 z-score: 879.9 E(): 0%3B 45.2%25 identity in 259 aa overlap and to SW:TSNR_STRAZ (EMBL:X02392) Streptomyces azureus rRNA (adenosine-2'-O-)-mehtyltransferase (EC 2.1.1.66) TsnR%2C 269 aa%3B fasta scores: opt: 226 z-score: 279.3 E(): 3.9e-08%3B 29.0%25 identity in 269 aa overlap. Contains Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family;gbkey=CDS;gene=SCL11.08c;product=rRNA methylase;protein_id=NP_625830.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1660683	1661117	.	-	.	ID=id1996;Dbxref=GeneID:1096983;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 171.40%2C E-value 1.5e-47;gbkey=misc_feature;gene=SCL11.08c
NC_003888.3	RefSeq	gene	1661473	1662705	.	-	.	ID=gene1549;Dbxref=GeneID:1096984;Name=SCL11.09c;gbkey=Gene;gene=SCL11.09c;gene_biotype=protein_coding;gene_synonym=SCL11.09c;locus_tag=SCO1553
NC_003888.3	RefSeq	CDS	1661473	1662705	.	-	0	ID=cds1518;Parent=gene1549;Dbxref=Genbank:NP_625831.1,GeneID:1096984;Name=NP_625831.1;Note=SCL11.09c%2C probable uroporphyrin-III methyltransferase%2C len: 410 aa%3B similar to TR:O05812 (EMBL:Z95207) Mycobacterium tuberculosis CysG%2C 405 aa%3B fasta scores: opt: 1487 z-score: 1630.7 E(): 0%3B 58.7%25 identity in 409 aa overlap and to SW:SUMT_BACME (EMBL:M62881) Bacillus megaterium uroporphyrin-III C-methyltransferase (EC 2.1.1.107) CobA%2C 238 aa%3B fasta scores: opt: 719 z-score: 794.9 E(): 0%3B 48.1%25 identity in 233 aa overlap. Contains Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases and match to Prosite entry PS00840 Uroporphyrin-III C-methyltransferase signature 2;gbkey=CDS;gene=SCL11.09c;product=uroporphyrin-III methyltransferase;protein_id=NP_625831.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1661560	1662201	.	-	.	ID=id1997;Dbxref=GeneID:1096984;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score 218.50%2C E-value 9.9e-62;gbkey=misc_feature;gene=SCL11.09c
NC_003888.3	RefSeq	sequence_feature	1661863	1661964	.	-	.	ID=id1998;Dbxref=GeneID:1096984;Note=PS00840 Uroporphyrin-III C-methyltransferase signature 2;gbkey=misc_feature;gene=SCL11.09c
NC_003888.3	RefSeq	ribosome_entry_site	1662716	1662719	.	-	.	ID=id1999;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	1662749	1662754	.	+	.	ID=id2000;Note=TTTAAA DraI restriction site;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	1662749	1662754	.	-	.	ID=id2001;Note=TTTAAA DraI restriction site;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1662892	1666530	.	-	.	ID=gene1550;Dbxref=GeneID:1096985;Name=SCL11.10c;gbkey=Gene;gene=SCL11.10c;gene_biotype=protein_coding;gene_synonym=SCL11.10c;locus_tag=SCO1554
NC_003888.3	RefSeq	CDS	1662892	1666530	.	-	0	ID=cds1519;Parent=gene1550;Dbxref=Genbank:NP_625832.1,GeneID:1096985;Name=NP_625832.1;Note=SCL11.10c%2C  nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase%2C len: 612 aa%3B N-terminal region similar to TR:O07233 (EMBL:Z96800) Mycobacterium tuberculosis hypothetical 24.9 kD protein%2C 223 aa%3B fasta scores: opt: 558 z-score: 594.0 E(): 1.1e-25%3B 42.3%25 identity in 222 aa overlap and C-terminal region similr to SW:COBT_ECOLI (EMBL:U33333) Escherichia coli nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) CobT%2C 359 aa%3B fasta scores: opt: 793 z-score: 837.6 E(): 0%3B 38.3%25 identity in 347 aa overlap. Contains Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family;gbkey=CDS;gene=SCL11.10c;product=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase;protein_id=NP_625832.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1664107	1664586	.	-	.	ID=id2002;Dbxref=GeneID:1096985;Note=Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family%2C score 93.60%2C E-value 3.9e-24;gbkey=misc_feature;gene=SCL11.10c
NC_003888.3	RefSeq	repeat_region	1665145	1665192	.	-	.	ID=id2003;Dbxref=GeneID:1096985;Note=repeat 8x (QE);gbkey=repeat_region;gene=SCL11.10c
NC_003888.3	RefSeq	ribosome_entry_site	1666538	1666542	.	-	.	ID=id2004;gbkey=RBS
NC_003888.3	RefSeq	gene	1666903	1668129	.	-	.	ID=gene1551;Dbxref=GeneID:1096986;Name=SCL11.11c;gbkey=Gene;gene=SCL11.11c;gene_biotype=protein_coding;gene_synonym=SCL11.11c;locus_tag=SCO1555
NC_003888.3	RefSeq	CDS	1666903	1668129	.	-	0	ID=cds1520;Parent=gene1551;Dbxref=Genbank:NP_625833.1,GeneID:1096986;Name=NP_625833.1;Note=SCL11.11c%2C probable methyltransferase%2C len: 408 aa%3B similar to TR:Q55879 (EMBL:D64004) Synechocystis sp. precorrin-6Y methylase CbiE%2C 425 aa%3B fasta scores: opt: 379 z-score: 405.5 E(): 3.6e-15%3B 29.9%25 identity in 354 aa overlap and to SW:CBIE_SALTY (EMBL:L12006) Salmonella typhimurium precorrin-6Y C5%2C15-methyltransferase [decarboxylating] (EC 2.1.1.132) CbiE%2C 201 aa%3B fasta scores: opt: 250 z-score: 274.2 E(): 7.5e-08%3B 33.3%25 identity in 204 aa overlap. Contains Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases;gbkey=CDS;gene=SCL11.11c;product=methyltransferase;protein_id=NP_625833.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1667575	1668120	.	-	.	ID=id2005;Dbxref=GeneID:1096986;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score 13.80%2C E-value 1e-06;gbkey=misc_feature;gene=SCL11.11c
NC_003888.3	RefSeq	ribosome_entry_site	1668140	1668143	.	-	.	ID=id2006;gbkey=RBS
NC_003888.3	RefSeq	gene	1668247	1668945	.	-	.	ID=gene1552;Dbxref=GeneID:1096987;Name=SCL11.12c;gbkey=Gene;gene=SCL11.12c;gene_biotype=protein_coding;gene_synonym=SCL11.12c;locus_tag=SCO1556
NC_003888.3	RefSeq	CDS	1668247	1668945	.	-	0	ID=cds1521;Parent=gene1552;Dbxref=Genbank:NP_625834.1,GeneID:1096987;Name=NP_625834.1;Note=SCL11.12c%2C possible acetyltransferase%2C len: 232 aa%3B similar to TR:CAB59477 (EMBL:AL132648) Streptomyces coelicolor  acetyltransferase SCI41.07c%2C 196 aa%3B fasta scores: opt: 245 z-score: 310.5 E(): 7.1e-10%3B 33.7%25 identity in 175 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCL11.12c;product=acetyltransferase;protein_id=NP_625834.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1668421	1668837	.	-	.	ID=id2007;Dbxref=GeneID:1096987;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 34.80%2C E-value 2e-06;gbkey=misc_feature;gene=SCL11.12c
NC_003888.3	RefSeq	stem_loop	1668958	1669006	.	-	.	ID=id2008;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1669056	1669883	.	-	.	ID=gene1553;Dbxref=GeneID:1096988;Name=SCL11.13c;gbkey=Gene;gene=SCL11.13c;gene_biotype=protein_coding;gene_synonym=SCL11.13c;locus_tag=SCO1557
NC_003888.3	RefSeq	CDS	1669056	1669883	.	-	0	ID=cds1522;Parent=gene1553;Dbxref=Genbank:NP_625835.1,GeneID:1096988;Name=NP_625835.1;Note=SCL11.13c%2C possible lipoprotein%2C len: 275 aa%3B similar to TR:AAD51879 (EMBL:AF102556) Salmonella enteritidis liporpotein SfbA%2C 276 aa%3B fasta scores: opt: 519 z-score: 578.9 E(): 8e-25%3B 38.0%25 identity in 258 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCL11.13c;product=lipoprotein;protein_id=NP_625835.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1669812	1669844	.	-	.	ID=id2009;Dbxref=GeneID:1096988;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCL11.13c
NC_003888.3	RefSeq	gene	1669950	1670672	.	-	.	ID=gene1554;Dbxref=GeneID:1096989;Name=SCL11.14c;gbkey=Gene;gene=SCL11.14c;gene_biotype=protein_coding;gene_synonym=SCL11.14c;locus_tag=SCO1558
NC_003888.3	RefSeq	CDS	1669950	1670672	.	-	0	ID=cds1523;Parent=gene1554;Dbxref=Genbank:NP_625836.1,GeneID:1096989;Name=NP_625836.1;Note=SCL11.14c%2C probable ABC transporter permease%2C len: 240 aa%3B similar to TR:AAF10929 (EMBL:AE001982) Deinococcus radiodurans ABC transporter%2C permease DR1357%2C 218 aa%3B fasta scores: opt: 721 z-score: 842.8 E(): 0%3B 57.7%25 identity in 213 aa overlap and to SW:PROW_BACSU (EMBL:U38418) Bacillus subtilis glycine/betaine/L-proline transport system permease ProW%2C 217 aa%3B fasta scores: opt: 212 z-score: 255.8 E(): 7.9e-07%3B 28.4%25 identity in 194 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component;gbkey=CDS;gene=SCL11.14c;product=ABC transporter permease;protein_id=NP_625836.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1670142	1670354	.	-	.	ID=id2010;Dbxref=GeneID:1096989;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 48.60%2C E-value 1.3e-10;gbkey=misc_feature;gene=SCL11.14c
NC_003888.3	RefSeq	gene	1670684	1671790	.	-	.	ID=gene1555;Dbxref=GeneID:1096990;Name=SCL11.15c;gbkey=Gene;gene=SCL11.15c;gene_biotype=protein_coding;gene_synonym=SCL11.15c;locus_tag=SCO1559
NC_003888.3	RefSeq	CDS	1670684	1671790	.	-	0	ID=cds1524;Parent=gene1555;Dbxref=Genbank:NP_625837.1,GeneID:1096990;Name=NP_625837.1;Note=SCL11.15c%2C probable ABC transporter ATP-binding protein%2C len: 368 aa%3B similar to SW:ABC_ECOLI (EMBL:L08626) Escherichia coli ATP-binding protein Abc%2C 343 aa%3B fasta scores: opt: 909 z-score: 1006.2 E(): 0%3B 49.1%25 identity in 346 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporte and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCL11.15c;product=ABC transporter ATP-binding protein;protein_id=NP_625837.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1671071	1671649	.	-	.	ID=id2011;Dbxref=GeneID:1096990;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 222.90%2C E-value 4.7e-63;gbkey=misc_feature;gene=SCL11.15c
NC_003888.3	RefSeq	sequence_feature	1671257	1671301	.	-	.	ID=id2012;Dbxref=GeneID:1096990;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCL11.15c
NC_003888.3	RefSeq	sequence_feature	1671605	1671628	.	-	.	ID=id2013;Dbxref=GeneID:1096990;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCL11.15c
NC_003888.3	RefSeq	gene	1672166	1672816	.	-	.	ID=gene1556;Dbxref=GeneID:1096991;Name=SCL11.16c;gbkey=Gene;gene=SCL11.16c;gene_biotype=protein_coding;gene_synonym=SCL11.16c;locus_tag=SCO1560
NC_003888.3	RefSeq	CDS	1672166	1672816	.	-	0	ID=cds1525;Parent=gene1556;Dbxref=Genbank:NP_625838.1,GeneID:1096991;Name=NP_625838.1;Note=SCL11.16c%2C possible phosphatase%2C len: 216 aa%3B similar to TR:P96428 (EMBL:Z79692) Sinorhizobium meliloti ORF24%2C 233 aa%3B fasta scores: opt: 488 z-score: 573.6 E(): 1.6e-24%3B 42.2%25 identity in 206 aa overlap and to TR:BAA16133 (EMBL:D90861)Escherichia coli 2-deoxyglucose-6-phosphate phosphatase 1 (EC 3.1.3.-) Dog1%2C 222aa%3B fasta scores: opt: 430 z-score: 507.0 E(): 8.1e-21%3B 36.2%25 identity in 213 aa overlap;gbkey=CDS;gene=SCL11.16c;product=phosphatase;protein_id=NP_625838.1;transl_table=11
NC_003888.3	RefSeq	gene	1672877	1673236	.	+	.	ID=gene1557;Dbxref=GeneID:1096992;Name=SCL11.17;gbkey=Gene;gene=SCL11.17;gene_biotype=protein_coding;gene_synonym=SCL11.17;locus_tag=SCO1561
NC_003888.3	RefSeq	CDS	1672877	1673236	.	+	0	ID=cds1526;Parent=gene1557;Dbxref=Genbank:NP_625839.1,GeneID:1096992;Name=NP_625839.1;Note=SCL11.17%2C possible integral membrane protein%2C len: 119 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL11.17;product=hypothetical protein;protein_id=NP_625839.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1673228	1673232	.	+	.	ID=id2014;Dbxref=GeneID:1096992;gbkey=RBS;gene=SCL11.17
NC_003888.3	RefSeq	gene	1673238	1673654	.	+	.	ID=gene1558;Dbxref=GeneID:1096993;Name=SCL11.18;gbkey=Gene;gene=SCL11.18;gene_biotype=protein_coding;gene_synonym=SCL11.18;locus_tag=SCO1562
NC_003888.3	RefSeq	CDS	1673238	1673654	.	+	0	ID=cds1527;Parent=gene1558;Dbxref=Genbank:NP_625840.1,GeneID:1096993;Name=NP_625840.1;Note=SCL11.18%2C possible integral membrane protein%2C len: 138 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL11.18;product=hypothetical protein;protein_id=NP_625840.1;transl_table=11
NC_003888.3	RefSeq	gene	1673718	1674203	.	-	.	ID=gene1559;Dbxref=GeneID:1096994;Name=SCL11.19c;gbkey=Gene;gene=SCL11.19c;gene_biotype=protein_coding;gene_synonym=SCL11.19c;locus_tag=SCO1563
NC_003888.3	RefSeq	CDS	1673718	1674203	.	-	0	ID=cds1528;Parent=gene1559;Dbxref=Genbank:NP_625841.1,GeneID:1096994;Name=NP_625841.1;Note=SCL11.19c%2C possible acetyltransferase%2C len: 161 aa%3B similar to TR:O26873 (EMBL:AE000856) Methanobacterium thermoautotrophicum conserved protein Mth779%2C 170 aa%3B fasta scores: opt: 174 z-score: 231.8 E(): 1.7e-05%3B 28.8%25 identity in 125 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCL11.19c;product=acetyltransferase;protein_id=NP_625841.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1673802	1674197	.	-	.	ID=id2015;Dbxref=GeneID:1096994;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 60.90%2C E-value 2.8e-14;gbkey=misc_feature;gene=SCL11.19c
NC_003888.3	RefSeq	gene	1674273	1674773	.	-	.	ID=gene1560;Dbxref=GeneID:1096995;Name=SCL11.20c;gbkey=Gene;gene=SCL11.20c;gene_biotype=protein_coding;gene_synonym=SCL11.20c;locus_tag=SCO1564
NC_003888.3	RefSeq	CDS	1674273	1674773	.	-	0	ID=cds1529;Parent=gene1560;Dbxref=Genbank:NP_625842.1,GeneID:1096995;Name=NP_625842.1;Note=SCL11.20c%2C possible RNA polymerase sigma factor ECF subfamily%2C len: 166 aa%3B similar to SW:RFAY_XANCP (EMBL:U19896) Xanthomonas campestris probable RNA polymerase sigma factor RfaY%2C 217 aa%3B fasta scores: opt: 135 z-score: 168.4 E(): 0.058%3B 30.9%25 identity in 136 aa overlap;gbkey=CDS;gene=SCL11.20c;product=RNA polymerase sigma factor;protein_id=NP_625842.1;transl_table=11
NC_003888.3	RefSeq	gene	1674848	1676026	.	-	.	ID=gene1561;Dbxref=GeneID:1096996;Name=SCL11.21c;gbkey=Gene;gene=SCL11.21c;gene_biotype=protein_coding;gene_synonym=SCL11.21c,SCL24.01c;locus_tag=SCO1565
NC_003888.3	RefSeq	CDS	1674848	1676026	.	-	0	ID=cds1530;Parent=gene1561;Dbxref=Genbank:NP_733538.1,GeneID:1096996;Name=NP_733538.1;Note=SCL24.01c%2C probable glycerophosphoryl diester phosphodiesterase (fragment)%2C len: >291 aa%3B similar to SW:GLPQ_ECOLI (EMBL:X56907) Escherichia coli glycerophosphoryl diester phosphodiesterase%2C periplasmic precursor (EC 3.1.4.46) GlpQ%2C 358 aa%3B fasta scores: opt: 321 z-score: 336.9 E(): 2.4e-11%3B 35.1%25 identity in 228 aa overlap. Contains possible N-terminal region signal peptide sequence~SCL11.21c%2C probable glycerophophosdyl diester phosphodiesterase (fragment)%2C len: >133 aa%3B similar to SW:GLPQ_ECOLI (EMBL:X56907) Escherichia coli glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) GlpQ%2C 358 aa%3B fasta scores: opt: 146 z-score: 185.0 E(): 0.0069%3B 34.3%25 identity in 102 aa overlap;gbkey=CDS;gene=SCL11.21c;product=glycerophosphoryl diester phosphodiesterase;protein_id=NP_733538.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1676032	1676037	.	-	.	ID=id2016;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1676391	1676395	.	+	.	ID=id2017;gbkey=RBS
NC_003888.3	RefSeq	gene	1676402	1677073	.	+	.	ID=gene1562;Dbxref=GeneID:1096997;Name=SCL24.02;gbkey=Gene;gene=SCL24.02;gene_biotype=protein_coding;gene_synonym=SCL24.02;locus_tag=SCO1566
NC_003888.3	RefSeq	CDS	1676402	1677073	.	+	0	ID=cds1531;Parent=gene1562;Dbxref=Genbank:NP_625843.1,GeneID:1096997;Name=NP_625843.1;Note=SCL24.02%2C possible acyltransferase%2C len: 223 aa%3B similar to TR:Q9ZBS1 (EMBL:AL034447) Streptomyces coelicolor acyltransferase SC7A1.02%2C 264 aa%3B fasta scores: opt: 277 z-score: 327.1 E(): 8.5e-11%3B 30.7%25 identity in 202 aa overlap and to TR:CAB51970 (EMBL:AL109661) Streptomyces coelicolor hypothetical 28.2 kD protein SC6E10.16c%2C 262 aa%3B fasta scores: opt: 858 z-score: 879.9 E(): 0%3B 59.0%25 identity in 217 aa overlap. Contains Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase;gbkey=CDS;gene=SCL24.02;product=acyltransferase;protein_id=NP_625843.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1676477	1677025	.	+	.	ID=id2018;Dbxref=GeneID:1096997;Note=Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase%2C score 134.70%2C E-value 1.7e-36;gbkey=misc_feature;gene=SCL24.02
NC_003888.3	RefSeq	stem_loop	1677087	1677137	.	-	.	ID=id2019;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1677149	1678681	.	-	.	ID=gene1563;Dbxref=GeneID:1096998;Name=SCL24.03c;gbkey=Gene;gene=SCL24.03c;gene_biotype=protein_coding;gene_synonym=SCL24.03c;locus_tag=SCO1567
NC_003888.3	RefSeq	CDS	1677149	1678681	.	-	0	ID=cds1532;Parent=gene1563;Dbxref=Genbank:NP_625844.1,GeneID:1096998;Name=NP_625844.1;Note=SCL24.03c%2C possible transmembrane-transport protein%2C len: 510 aa%3B similar to TR:O33968 (EMBL:U80063) Streptomyces cinnamoneus  transmembrane%2C proton-dependent transport protein%2C 519 aa%3B fasta scores: opt: 2339 z-score: 2439.5 E(): 0%3B 72.7%25 identity in 510 aa overlap and to SW:QACA_STAAU (EMBL:X56628) Staphylococcus aureus antiseptic resistance protein QacA%2C 514 aa%3B fasta scores: opt: 1116 z-score: 1166.8 E(): 0%3B 36.6%25 identity in 503 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL24.03c;product=transmembrane-transport protein;protein_id=NP_625844.1;transl_table=11
NC_003888.3	RefSeq	gene	1678678	1679247	.	-	.	ID=gene1564;Dbxref=GeneID:1096999;Name=SCL24.04c;gbkey=Gene;gene=SCL24.04c;gene_biotype=protein_coding;gene_synonym=SCL24.04c;locus_tag=SCO1568
NC_003888.3	RefSeq	CDS	1678678	1679247	.	-	0	ID=cds1533;Parent=gene1564;Dbxref=Genbank:NP_625845.1,GeneID:1096999;Name=NP_625845.1;Note=SCL24.04c%2C probable tetR-family transcriptional regulator%2C len: 189 aa%3B similar to SW:NFXB_PSEAE (EMBL:X65646) Pseudomonas aeruginosa transcriptional regulatory protein NfxB%2C 187 aa%3B fasta scores: opt: 297 z-score: 367.8 E(): 4.5e-13%3B 33.3%25 identity in 174 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Contains also possible helix-turn-helix motif at residues 28..49 (+5.21 SD);gbkey=CDS;gene=SCL24.04c;product=TetR family transcriptional regulator;protein_id=NP_625845.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1678685	1678690	.	-	.	ID=id2020;Dbxref=GeneID:1096999;gbkey=RBS;gene=SCL24.04c
NC_003888.3	RefSeq	sequence_feature	1679074	1679208	.	-	.	ID=id2021;Dbxref=GeneID:1096999;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 30.90%2C E-value 7.8e-07;gbkey=misc_feature;gene=SCL24.04c
NC_003888.3	RefSeq	gene	1679335	1680387	.	-	.	ID=gene1565;Dbxref=GeneID:1097000;Name=SCL24.05c;gbkey=Gene;gene=SCL24.05c;gene_biotype=protein_coding;gene_synonym=SCL24.05c;locus_tag=SCO1569
NC_003888.3	RefSeq	CDS	1679335	1680387	.	-	0	ID=cds1534;Parent=gene1565;Dbxref=Genbank:NP_625846.1,GeneID:1097000;Name=NP_625846.1;Note=SCL24.05c%2C possible oxidoreductase%2C len: 350 aa%3B similar to TR:AAF09836 (EMBL:AE001886) Deinococcus radiodurans oxidoreductase%2C DR0249%2C 357 aa%3B fasta scores: opt: 1019 z-score: 1133.1 E(): 0%3B 51.0%25 identity in 359 aa overlap;gbkey=CDS;gene=SCL24.05c;product=oxidoreductase;protein_id=NP_625846.1;transl_table=11
NC_003888.3	RefSeq	gene	1680432	1681859	.	-	.	ID=gene1566;Dbxref=GeneID:1097001;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;gene_synonym=argH,SCL24.06c;locus_tag=SCO1570
NC_003888.3	RefSeq	CDS	1680432	1681859	.	-	0	ID=cds1535;Parent=gene1566;Dbxref=Genbank:NP_625847.1,GeneID:1097001;Name=NP_625847.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;gene=argH;product=argininosuccinate lyase;protein_id=NP_625847.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1680576	1681823	.	-	.	ID=id2022;Dbxref=GeneID:1097001;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 310.80%2C E-value 1.6e-89;gbkey=misc_feature;gene=argH
NC_003888.3	RefSeq	sequence_feature	1680948	1680971	.	-	.	ID=id2023;Dbxref=GeneID:1097001;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=argH
NC_003888.3	RefSeq	sequence_feature	1680981	1681010	.	-	.	ID=id2024;Dbxref=GeneID:1097001;Note=PS00163 Fumarate lyases signature;gbkey=misc_feature;gene=argH
NC_003888.3	RefSeq	ribosome_entry_site	1681868	1681871	.	-	.	ID=id2025;gbkey=RBS
NC_003888.3	RefSeq	gene	1681979	1682566	.	+	.	ID=gene1567;Dbxref=GeneID:1097002;Name=SCL24.07;gbkey=Gene;gene=SCL24.07;gene_biotype=protein_coding;gene_synonym=SCL24.07;locus_tag=SCO1571
NC_003888.3	RefSeq	CDS	1681979	1682566	.	+	0	ID=cds1536;Parent=gene1567;Dbxref=Genbank:NP_625848.1,GeneID:1097002;Name=NP_625848.1;Note=SCL24.07%2C unknown%2C len: 195 aa;gbkey=CDS;gene=SCL24.07;product=hypothetical protein;protein_id=NP_625848.1;transl_table=11
NC_003888.3	RefSeq	gene	1682570	1683286	.	+	.	ID=gene1568;Dbxref=GeneID:1097003;Name=SCL24.08;gbkey=Gene;gene=SCL24.08;gene_biotype=protein_coding;gene_synonym=SCL24.08;locus_tag=SCO1572
NC_003888.3	RefSeq	CDS	1682570	1683286	.	+	0	ID=cds1537;Parent=gene1568;Dbxref=Genbank:NP_625849.1,GeneID:1097003;Name=NP_625849.1;Note=SCL24.08%2C possible hypothetical protein%2C len: 238 aa%3B similar to TR:O07236 (EMBL:Z96800) Mycobacterium tuberculosis hypothetical 22.5 kD protein MTCY63.14%2C 218 aa%3B fasta scores: opt: 315 z-score: 359.1 E(): 1.4e-12%3B 31.2%25 identity in 218 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCL24.08;product=hypothetical protein;protein_id=NP_625849.1;transl_table=11
NC_003888.3	RefSeq	gene	1683419	1684756	.	+	.	ID=gene1569;Dbxref=GeneID:1097004;Name=SCL24.09;gbkey=Gene;gene=SCL24.09;gene_biotype=protein_coding;gene_synonym=SCL24.09;locus_tag=SCO1573
NC_003888.3	RefSeq	CDS	1683419	1684756	.	+	0	ID=cds1538;Parent=gene1569;Dbxref=Genbank:NP_625850.1,GeneID:1097004;Name=NP_625850.1;Note=SCL24.09%2C possible oxidoreductase (membrane protein)%2C len: 445 aa%3B similar to SW:XYLZ_PSEPU (EMBL:M64747) Pseudomonas putida toluate 1%2C2-dioxygenase subunit XylZ%2C 336 aa%3B fasta scores: opt: 236 z-score: 273.1 E(): 8.6e-08%3B 25.4%25 identity in 228 aa overlap. Contains Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCL24.09;product=oxidoreductase membrane protein;protein_id=NP_625850.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1684385	1684702	.	+	.	ID=id2026;Dbxref=GeneID:1097004;Note=Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain%2C score 30.30%2C E-value 2.9e-06;gbkey=misc_feature;gene=SCL24.09
NC_003888.3	RefSeq	gene	1684919	1685587	.	+	.	ID=gene1570;Dbxref=GeneID:1097005;Name=SCL24.10;gbkey=Gene;gene=SCL24.10;gene_biotype=protein_coding;gene_synonym=SCL24.10;locus_tag=SCO1574
NC_003888.3	RefSeq	CDS	1684919	1685587	.	+	0	ID=cds1539;Parent=gene1570;Dbxref=Genbank:NP_625851.1,GeneID:1097005;Name=NP_625851.1;Note=SCL24.10%2C unknown%2C len: 222 aa;gbkey=CDS;gene=SCL24.10;product=hypothetical protein;protein_id=NP_625851.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1685636	1685640	.	+	.	ID=id2027;gbkey=RBS
NC_003888.3	RefSeq	gene	1685643	1686383	.	+	.	ID=gene1571;Dbxref=GeneID:1097006;Name=SCL24.11;gbkey=Gene;gene=SCL24.11;gene_biotype=protein_coding;gene_synonym=SCL24.11;locus_tag=SCO1575
NC_003888.3	RefSeq	CDS	1685643	1686383	.	+	0	ID=cds1540;Parent=gene1571;Dbxref=Genbank:NP_625852.1,GeneID:1097006;Name=NP_625852.1;Note=SCL24.11%2C possible thiamine biosynthesis lipoprotein precursor%2C len: 246 aa%3B similar to SW:APBE_TREPA (EMBL:AE001250) Treponema pallidum thiamine biosynthesis lipoprotein ApbE precursor%2C 362 aa%3B fasta scores: opt: 224 z-score: 251.2 E(): 1.4e-06%3B 34.9%25 identity in 172 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCL24.11;product=thiamine biosynthesis lipoprotein;protein_id=NP_625852.1;transl_table=11
NC_003888.3	RefSeq	gene	1686616	1687155	.	-	.	ID=gene1572;Dbxref=GeneID:1097007;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;gene_synonym=argR,SCL24.12c;locus_tag=SCO1576
NC_003888.3	RefSeq	CDS	1686616	1687155	.	-	0	ID=cds1541;Parent=gene1572;Dbxref=Genbank:NP_625853.1,GeneID:1097007;Name=NP_625853.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;gene=argR;product=arginine repressor;protein_id=NP_625853.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1686619	1687104	.	-	.	ID=id2028;Dbxref=GeneID:1097007;Note=Pfam match to entry PF01316 Arg_repressor%2C Arginine repressor%2C score 44.80%2C E-value 2e-09;gbkey=misc_feature;gene=argR
NC_003888.3	RefSeq	gene	1687163	1688371	.	-	.	ID=gene1573;Dbxref=GeneID:1097008;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=SCL24.13c;locus_tag=SCO1577
NC_003888.3	RefSeq	CDS	1687163	1688371	.	-	0	ID=cds1542;Parent=gene1573;Dbxref=Genbank:NP_625854.1,GeneID:1097008;Name=NP_625854.1;Note=catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=NP_625854.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1687265	1688284	.	-	.	ID=id2029;Dbxref=GeneID:1097008;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 398.30%2C E-value 5.4e-138;gbkey=misc_feature;gene=argD
NC_003888.3	RefSeq	sequence_feature	1687616	1687732	.	-	.	ID=id2030;Dbxref=GeneID:1097008;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=argD
NC_003888.3	RefSeq	gene	1688368	1689288	.	-	.	ID=gene1574;Dbxref=GeneID:1097009;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;gene_synonym=argB,SCL24.14c;locus_tag=SCO1578
NC_003888.3	RefSeq	CDS	1688368	1689288	.	-	0	ID=cds1543;Parent=gene1574;Dbxref=Genbank:NP_625855.1,GeneID:1097009;Name=NP_625855.1;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;gbkey=CDS;gene=argB;product=acetylglutamate kinase;protein_id=NP_625855.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1688374	1688377	.	-	.	ID=id2031;Dbxref=GeneID:1097009;gbkey=RBS;gene=argB
NC_003888.3	RefSeq	sequence_feature	1688554	1689186	.	-	.	ID=id2032;Dbxref=GeneID:1097009;Note=Pfam match to entry PF00696 aakinase%2C Amino acid kinase family%2C score -8.30%2C E-value 5.7e-06;gbkey=misc_feature;gene=argB
NC_003888.3	RefSeq	gene	1689285	1690436	.	-	.	ID=gene1575;Dbxref=GeneID:1097010;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;gene_synonym=SCL24.15c;locus_tag=SCO1579
NC_003888.3	RefSeq	CDS	1689285	1690436	.	-	0	ID=cds1544;Parent=gene1575;Dbxref=Genbank:NP_733539.1,GeneID:1097010;Name=NP_733539.1;Note=bifunctional arginine biosynthesis protein ArgJ%3B functions at the 1st and 5th steps in arginine biosynthesis%3B involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate;gbkey=CDS;gene=argJ;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=NP_733539.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1689288	1689971	.	-	.	ID=id2033;Dbxref=GeneID:1097010;Note=Pfam match to entry PF01960 ArgJ%2C ArgJ family%2C score 143.10%2C E-value 4.8e-39;gbkey=misc_feature;gene=argJ
NC_003888.3	RefSeq	gene	1690433	1691461	.	-	.	ID=gene1576;Dbxref=GeneID:1097011;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=SCO1580
NC_003888.3	RefSeq	CDS	1690433	1691461	.	-	0	ID=cds1545;Parent=gene1576;Dbxref=Genbank:NP_625856.1,GeneID:1097011;Name=NP_625856.1;Note=catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate;gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=NP_625856.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1690444	1690447	.	-	.	ID=id2034;Dbxref=GeneID:1097011;Note=possible RBS upstream of argJ;gbkey=RBS;gene=argC
NC_003888.3	RefSeq	sequence_feature	1690715	1691761	.	-	.	ID=id2035;Note=99.8%25 match to SCARGC X66783 S.coelicolor argC gene (partial);gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	1690991	1691041	.	-	.	ID=id2036;Dbxref=GeneID:1097011;Note=PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site;gbkey=misc_feature;gene=argC
NC_003888.3	RefSeq	ribosome_entry_site	1691469	1691474	.	-	.	ID=id2037;Note=possible RBS upstream of argC;gbkey=RBS
NC_003888.3	RefSeq	gene	1691495	1692058	.	+	.	ID=gene1577;Dbxref=GeneID:1097012;Name=SCI35.03;gbkey=Gene;gene=SCI35.03;gene_biotype=protein_coding;gene_synonym=SCI35.03;locus_tag=SCO1581
NC_003888.3	RefSeq	CDS	1691495	1692058	.	+	0	ID=cds1546;Parent=gene1577;Dbxref=Genbank:NP_625857.1,GeneID:1097012;Name=NP_625857.1;Note=SCI35.03%2C membrane protein%2C len: 187 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI35.03;product=hypothetical protein;protein_id=NP_625857.1;transl_table=11
NC_003888.3	RefSeq	gene	1692048	1692572	.	-	.	ID=gene1578;Dbxref=GeneID:1097013;Name=SCI35.04c;gbkey=Gene;gene=SCI35.04c;gene_biotype=protein_coding;gene_synonym=SCI35.04c;locus_tag=SCO1582
NC_003888.3	RefSeq	CDS	1692048	1692572	.	-	0	ID=cds1547;Parent=gene1578;Dbxref=Genbank:NP_625858.1,GeneID:1097013;Name=NP_625858.1;Note=SCI35.04c%2C ATP/GTP binding protein%2C len: 174 aa%3B similar to TMRB_BACSU tunicamycin resistance protein (197 aa)%2C fasta scores%3B opt: 282 z-score: 488.2 E(): 6.1e-20%2C 39.5%25 identity in 119 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI35.04c;product=ATP/GTP binding protein;protein_id=NP_625858.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1692531	1692554	.	-	.	ID=id2038;Dbxref=GeneID:1097013;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI35.04c
NC_003888.3	RefSeq	gene	1692635	1695109	.	-	.	ID=gene1579;Dbxref=GeneID:1097014;Name=SCI35.05c;gbkey=Gene;gene=SCI35.05c;gene_biotype=protein_coding;gene_synonym=SCI35.05c;locus_tag=SCO1583
NC_003888.3	RefSeq	CDS	1692635	1695109	.	-	0	ID=cds1548;Parent=gene1579;Dbxref=Genbank:NP_625859.1,GeneID:1097014;Name=NP_625859.1;Note=SCI35.05c%2C probable  arabinosidase%2C len: 824 aa%3B similar to e.g. TR:Q59218 (EMBL:U15178) arabinosidase (EC 3.2.1.55) (Bacteroides ovatus) (660 aa)%2C fasta scores%3B opt: 1204 z-score: 1030.7 E(): 0%2C 41.4%25 identity in 601 aa overlap;gbkey=CDS;gene=SCI35.05c;product=arabinosidase;protein_id=NP_625859.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1695115	1695118	.	-	.	ID=id2039;Note=possible RBS upstream of SCI35.05c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1695221	1695224	.	+	.	ID=id2040;Note=possible RBS upstream of SCI35.06;gbkey=RBS
NC_003888.3	RefSeq	gene	1695246	1695704	.	+	.	ID=gene1580;Dbxref=GeneID:1097015;Name=SCI35.06;gbkey=Gene;gene=SCI35.06;gene_biotype=protein_coding;gene_synonym=SCI35.06;locus_tag=SCO1584
NC_003888.3	RefSeq	CDS	1695246	1695704	.	+	0	ID=cds1549;Parent=gene1580;Dbxref=Genbank:NP_625860.1,GeneID:1097015;Name=NP_625860.1;Note=SCI35.06%2C unknown%2C len: 152 aa;gbkey=CDS;gene=SCI35.06;product=hypothetical protein;protein_id=NP_625860.1;transl_table=11
NC_003888.3	RefSeq	gene	1695667	1696287	.	-	.	ID=gene1581;Dbxref=GeneID:1097016;Name=SCI35.07c;gbkey=Gene;gene=SCI35.07c;gene_biotype=protein_coding;gene_synonym=SCI35.07c;locus_tag=SCO1585
NC_003888.3	RefSeq	CDS	1695667	1696287	.	-	0	ID=cds1550;Parent=gene1581;Dbxref=Genbank:NP_625861.1,GeneID:1097016;Name=NP_625861.1;Note=SCI35.07c%2C hypothetical protein%2C len: 206 aa%3B similar to TR:O87860 (EMBL:Z15137) Streptomyces chrysomallus hypothetical protein%2C 144 aa%3B fasta scores: opt: 536 Z-score: 638.4 E(): 6.3e-28%3B 66.929%25 identity in 127 aa overlap;gbkey=CDS;gene=SCI35.07c;product=hypothetical protein;protein_id=NP_625861.1;transl_table=11
NC_003888.3	RefSeq	gene	1696361	1696801	.	-	.	ID=gene1582;Dbxref=GeneID:1097017;Name=SCI35.08c;gbkey=Gene;gene=SCI35.08c;gene_biotype=protein_coding;gene_synonym=SCI35.08c;locus_tag=SCO1586
NC_003888.3	RefSeq	CDS	1696361	1696801	.	-	0	ID=cds1551;Parent=gene1582;Dbxref=Genbank:NP_625862.1,GeneID:1097017;Name=NP_625862.1;Note=SCI35.08c%2C hypothetical protein%2C len: 146 aa%3B distant similarity to a hypothetical protein from Synechocystis sp. TR:Q55911 (EMBL:D64005) SLL0286 (171 aa)%2C fasta scores%3B opt: 142 z-score: 208.1 E(): 0.00024%2C 33.9%25 identity in 127 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 24.80%2C E-value 0.002;gbkey=CDS;gene=SCI35.08c;product=hypothetical protein;protein_id=NP_625862.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1696409	1696762	.	-	.	ID=id2041;Dbxref=GeneID:1097017;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 24.80%2C E-value 0.002;gbkey=misc_feature;gene=SCI35.08c
NC_003888.3	RefSeq	gene	1696856	1698298	.	-	.	ID=gene1583;Dbxref=GeneID:1097018;Name=SCI35.09c;gbkey=Gene;gene=SCI35.09c;gene_biotype=protein_coding;gene_synonym=SCI35.09c;locus_tag=SCO1587
NC_003888.3	RefSeq	CDS	1696856	1698298	.	-	0	ID=cds1552;Parent=gene1583;Dbxref=Genbank:NP_625863.1,GeneID:1097018;Name=NP_625863.1;Note=SCI35.09c%2C possible transcriptional regulator%2C len: 480 aa%3B similar to hypothetical proteins e.g. TR:P96681 (EMBL:AB001488) YdfD (B. subtilis) (482 aa)%2C fasta scores%3B opt: 535 z-score: 419.1 E(): 4.2e-16%2C 26.1%25 identity in 471 aa overlap and YRDX_RHOSH hypothetical transcriptional regulator (456 aa)%2C fasta scores%3B opt: 299 z-score: 407.0 E(): 2e-15%2C 27.2%25 identity in 464 aa overlap. Contains probable helix-turn-helix motif at aa 17-38 (Score 1327%2C +3.71 SD) and Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 41.30%2C E-value 3.4e-11;gbkey=CDS;gene=SCI35.09c;product=transcriptional regulator;protein_id=NP_625863.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1698137	1698277	.	-	.	ID=id2042;Dbxref=GeneID:1097018;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 41.30%2C E-value 3.4e-11;gbkey=misc_feature;gene=SCI35.09c
NC_003888.3	RefSeq	gene	1698333	1699295	.	+	.	ID=gene1584;Dbxref=GeneID:1097019;Name=SCI35.10;gbkey=Gene;gene=SCI35.10;gene_biotype=protein_coding;gene_synonym=SCI35.10;locus_tag=SCO1588
NC_003888.3	RefSeq	CDS	1698333	1699295	.	+	0	ID=cds1553;Parent=gene1584;Dbxref=Genbank:NP_625864.1,GeneID:1097019;Name=NP_625864.1;Note=SCI35.10%2C probable integral membrane protein%2C len: 320 aa%3B highly similar to a hypothetical protein from B. subtilis TR:P96668 (EMBL:AB001488) YdeK protein%2C 287 aa%3B fasta scores%3B opt: 624 z-score: 893.6 E(): 0%2C 40.3%25 identity in 293 aa overlap;gbkey=CDS;gene=SCI35.10;product=hypothetical protein;protein_id=NP_625864.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1699323	1699327	.	+	.	ID=id2043;Note=possible RBS upstream of SCI35.11;gbkey=RBS
NC_003888.3	RefSeq	gene	1699336	1699530	.	+	.	ID=gene1585;Dbxref=GeneID:1097020;Name=SCI35.11;gbkey=Gene;gene=SCI35.11;gene_biotype=protein_coding;gene_synonym=SCI35.11;locus_tag=SCO1589
NC_003888.3	RefSeq	CDS	1699336	1699530	.	+	0	ID=cds1554;Parent=gene1585;Dbxref=Genbank:NP_625865.1,GeneID:1097020;Name=NP_625865.1;Note=SCI35.11%2C hypothetical protein%2C len: 64 aa%3B similar to two small hypothetical proteins from M. tuberculosis e.g. YU07_MYCTU MTCY339.07C (80 aa)%2C fasta scores%3B opt: 169 z-score: 320.8 E(): 1.3e-10%2C 46.6%25 identity in 58 aa overlap;gbkey=CDS;gene=SCI35.11;product=hypothetical protein;protein_id=NP_625865.1;transl_table=11
NC_003888.3	RefSeq	gene	1699562	1700806	.	-	.	ID=gene1586;Dbxref=GeneID:1097021;Name=SCI35.12c;gbkey=Gene;gene=SCI35.12c;gene_biotype=protein_coding;gene_synonym=SCI35.12c;locus_tag=SCO1590
NC_003888.3	RefSeq	CDS	1699562	1700806	.	-	0	ID=cds1555;Parent=gene1586;Dbxref=Genbank:NP_625866.1,GeneID:1097021;Name=NP_625866.1;Note=SCI35.12c%2C hypothetical protein%2C len: 414 aa%3B similar to hypothetical proteins from several organisms e.g. E. coli TR:P76130 (EMBL:AE000246) (439 aa)%2C fasta scores%3B opt: 879 z-score: 1103.6 E(): 0%2C 39.6%25 identity in 407 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI35.12c;product=hypothetical protein;protein_id=NP_625866.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1700814	1700819	.	-	.	ID=id2044;Note=possible RBS upstream of SCI35.12c;gbkey=RBS
NC_003888.3	RefSeq	gene	1700944	1701855	.	+	.	ID=gene1587;Dbxref=GeneID:1097022;Name=SCI35.13;gbkey=Gene;gene=SCI35.13;gene_biotype=protein_coding;gene_synonym=SCI35.13;locus_tag=SCO1591
NC_003888.3	RefSeq	CDS	1700944	1701855	.	+	0	ID=cds1556;Parent=gene1587;Dbxref=Genbank:NP_625867.1,GeneID:1097022;Name=NP_625867.1;Note=converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA;gbkey=CDS;gene=SCI35.13;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=NP_625867.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1701013	1701849	.	+	.	ID=id2045;Dbxref=GeneID:1097022;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C score 361.30%2C E-value 1.1e-104;gbkey=misc_feature;gene=SCI35.13
NC_003888.3	RefSeq	gene	1701846	1702388	.	-	.	ID=gene1588;Dbxref=GeneID:1097023;Name=SCI35.14c;gbkey=Gene;gene=SCI35.14c;gene_biotype=protein_coding;gene_synonym=SCI35.14c;locus_tag=SCO1592
NC_003888.3	RefSeq	CDS	1701846	1702388	.	-	0	ID=cds1557;Parent=gene1588;Dbxref=Genbank:NP_625868.1,GeneID:1097023;Name=NP_625868.1;Note=SCI35.14c%2C hypothetical protein%2C len: 180 aa%3B similar to other hypothetical proteins containing a mutT domain e.g. YQKG_BACSU (185 aa)%2C fasta scores%3B opt: 192 z-score: 280.5 E(): 2.2e-08%2C 29.2%25 identity in 168 aa overlap. Contains PS00893 mutT domain signature%2C Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 28.70%2C E-value 1e-06%2C and TTA Leu codon: possible target for action of bldA;gbkey=CDS;gene=SCI35.14c;product=hypothetical protein;protein_id=NP_625868.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1701888	1701890	.	-	.	ID=id2046;Dbxref=GeneID:1097023;Note=TTA Leu codon: possible target for action of bldA;gbkey=misc_feature;gene=SCI35.14c
NC_003888.3	RefSeq	sequence_feature	1702101	1702223	.	-	.	ID=id2047;Dbxref=GeneID:1097023;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 28.70%2C E-value 1e-06;gbkey=misc_feature;gene=SCI35.14c
NC_003888.3	RefSeq	sequence_feature	1702110	1702169	.	-	.	ID=id2048;Dbxref=GeneID:1097023;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SCI35.14c
NC_003888.3	RefSeq	ribosome_entry_site	1702396	1702402	.	-	.	ID=id2049;Note=possible RBS upstream of SCI35.14c;gbkey=RBS
NC_003888.3	RefSeq	gene	1702516	1703856	.	-	.	ID=gene1589;Dbxref=GeneID:1097024;Name=SCI35.15c;gbkey=Gene;gene=SCI35.15c;gene_biotype=protein_coding;gene_synonym=SCI35.15c;locus_tag=SCO1593
NC_003888.3	RefSeq	CDS	1702516	1703856	.	-	0	ID=cds1558;Parent=gene1589;Dbxref=Genbank:NP_625869.1,GeneID:1097024;Name=NP_625869.1;Note=SCI35.15c%2C possible transcriptional regulator%2C len: 446 aa%3B similar to transcriptional regulators in S. griseus and S. colelicolor: SP15_STRGR 55.5 kD and 49.5 sporulation proteins (529 aa)%2C fasta scores%3B opt: 399 z-score: 694.6 E(): 1.9e-31%2C 31.5%25 identity in 505 aa overlap and TR:Q53958 (EMBL:M80614) sporulation-associated protein genes (473 aa)%2C fasta scores%3B opt: 405 z-score: 692.7 E(): 2.5e-31%2C 35.2%25 identity in 449 aa overlap. Contains PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=CDS;gene=SCI35.15c;product=transcriptional regulator;protein_id=NP_625869.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1703026	1703157	.	-	.	ID=id2050;Dbxref=GeneID:1097024;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SCI35.15c
NC_003888.3	RefSeq	stem_loop	1704171	1704220	.	+	.	ID=id2051;Note=hairpin loop with 22 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1704284	1706806	.	-	.	ID=gene1590;Dbxref=GeneID:1097025;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=SCO1594
NC_003888.3	RefSeq	CDS	1704284	1706806	.	-	0	ID=cds1559;Parent=gene1590;Dbxref=Genbank:NP_625870.1,GeneID:1097025;Name=NP_625870.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=NP_625870.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1706441	1706464	.	-	.	ID=id2052;Dbxref=GeneID:1097025;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=pheT
NC_003888.3	RefSeq	gene	1706806	1707882	.	-	.	ID=gene1591;Dbxref=GeneID:1097026;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=SCO1595
NC_003888.3	RefSeq	CDS	1706806	1707882	.	-	0	ID=cds1560;Parent=gene1591;Dbxref=Genbank:NP_625871.2,GeneID:1097026;Name=NP_625871.2;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 1 subfamily;gbkey=CDS;gene=pheS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=NP_625871.2;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1706812	1706815	.	-	.	ID=id2053;Dbxref=GeneID:1097026;Note=possible RBS upstream of pheT;gbkey=RBS;gene=pheS
NC_003888.3	RefSeq	sequence_feature	1706884	1706913	.	-	.	ID=id2054;Dbxref=GeneID:1097026;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2;gbkey=misc_feature;gene=pheS
NC_003888.3	RefSeq	sequence_feature	1707223	1707276	.	-	.	ID=id2055;Dbxref=GeneID:1097026;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1;gbkey=misc_feature;gene=pheS
NC_003888.3	RefSeq	gene	1708109	1709248	.	-	.	ID=gene1592;Dbxref=GeneID:1097027;Name=SCI35.18c;gbkey=Gene;gene=SCI35.18c;gene_biotype=protein_coding;gene_synonym=SCI35.18c;locus_tag=SCO1596
NC_003888.3	RefSeq	CDS	1708109	1709248	.	-	0	ID=cds1561;Parent=gene1592;Dbxref=Genbank:NP_625872.1,GeneID:1097027;Name=NP_625872.1;Note=SCI35.18c%2C probable two-component sensor%2C len: 379 aa%3B similar to many e.g. HYDH_ECOLI sensor protein hydH (465 aa)%2C fasta scores%3B opt: 296 z-score: 418.4 E(): 4.6e-16%2C 35.4%25 identity in 257 aa overlap. No apparent transmembrane domains. Contains Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 205.10%2C E-value 1e-57;gbkey=CDS;gene=SCI35.18c;product=two-component sensor;protein_id=NP_625872.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1708136	1708774	.	-	.	ID=id2056;Dbxref=GeneID:1097027;Note=Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 205.10%2C E-value 1e-57;gbkey=misc_feature;gene=SCI35.18c
NC_003888.3	RefSeq	ribosome_entry_site	1709260	1709264	.	-	.	ID=id2057;Note=possible RBS upstream of SCI35.18c;gbkey=RBS
NC_003888.3	RefSeq	gene	1709299	1710147	.	-	.	ID=gene1593;Dbxref=GeneID:1097028;Name=SCI35.19c;gbkey=Gene;gene=SCI35.19c;gene_biotype=protein_coding;gene_synonym=SCI35.19c;locus_tag=SCO1597
NC_003888.3	RefSeq	CDS	1709299	1710147	.	-	0	ID=cds1562;Parent=gene1593;Dbxref=Genbank:NP_625873.1,GeneID:1097028;Name=NP_625873.1;Note=SCI35.19c%2C probable rRNA methylase%2C len: 282 aa%3B similar to many members of ther spoU famil e.g. TSNR_STRLU 23s rRNA methyltransferase (270 aa)%2C fasta scores%3B opt: 254 z-score: 251.7 E(): 9e-07%2C 27.0%25 identity in 270 aa overlap. Contains Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 107.90%2C E-value 1.9e-28;gbkey=CDS;gene=SCI35.19c;product=rRNA methylase;protein_id=NP_625873.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1709356	1709793	.	-	.	ID=id2058;Dbxref=GeneID:1097028;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 107.90%2C E-value 1.9e-28;gbkey=misc_feature;gene=SCI35.19c
NC_003888.3	RefSeq	stem_loop	1710268	1710306	.	+	.	ID=id2059;Note=hairpin loop with 18 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1710331	1710714	.	-	.	ID=gene1594;Dbxref=GeneID:1097029;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=SCO1598
NC_003888.3	RefSeq	CDS	1710331	1710714	.	-	0	ID=cds1563;Parent=gene1594;Dbxref=Genbank:NP_625874.1,GeneID:1097029;Name=NP_625874.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=NP_625874.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1710388	1710711	.	-	.	ID=id2060;Dbxref=GeneID:1097029;Note=Pfam match to entry PF00453 L20%2C Ribosomal protein L20%2C score 174.80%2C E-value 1.6e-54;gbkey=misc_feature;gene=rplT
NC_003888.3	RefSeq	ribosome_entry_site	1710722	1710727	.	-	.	ID=id2061;Note=possible RBS upstream of rplT;gbkey=RBS
NC_003888.3	RefSeq	gene	1710812	1711006	.	-	.	ID=gene1595;Dbxref=GeneID:1097030;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=SCO1599
NC_003888.3	RefSeq	CDS	1710812	1711006	.	-	0	ID=cds1564;Parent=gene1595;Dbxref=Genbank:NP_625875.1,GeneID:1097030;Name=NP_625875.1;Note=SCI35.21c%2C rpmI%2C 50S ribosomal protein L35%2C len: 64 aa%3B similar to many e.g. RL35_BACSU 50S ribosomal protein L35 (65 aa)%2C fasta scores%3B opt: 179 z-score: 355.6 E(): 1.5e-12%2C 45.9%25 identity in 61 aa overlap;gbkey=CDS;gene=rpmI;product=50S ribosomal protein L35;protein_id=NP_625875.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1711018	1711022	.	-	.	ID=id2062;Note=possible RBS upstream of rpmI;gbkey=RBS
NC_003888.3	RefSeq	gene	1711121	1711774	.	-	.	ID=gene1596;Dbxref=GeneID:1097031;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=SCO1600
NC_003888.3	RefSeq	CDS	1711121	1711774	.	-	0	ID=cds1565;Parent=gene1596;Dbxref=Genbank:NP_625876.1,GeneID:1097031;Name=NP_625876.1;Note=IF-3 has several functions that are required and promote translation initiation including%3B preventing association of 70S by binding to 30S%3B monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites%3B stimulates codon-anticodon interactions at P-site%3B involved in moving mRNA to the P-site%3B and in recycling subunits;gbkey=CDS;gene=infC;product=translation initiation factor IF-3;protein_id=NP_625876.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1711187	1711210	.	-	.	ID=id2063;Dbxref=GeneID:1097031;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=infC
NC_003888.3	RefSeq	sequence_feature	1711325	1711675	.	-	.	ID=id2064;Dbxref=GeneID:1097031;Note=Pfam match to entry PF00707 IF3%2C Translation initiation factor IF-3%2C score 201.40%2C E-value 1.4e-56;gbkey=misc_feature;gene=infC
NC_003888.3	RefSeq	ribosome_entry_site	1711779	1711784	.	-	.	ID=id2065;Note=possible RBS upstream of infC;gbkey=RBS
NC_003888.3	RefSeq	gene	1712158	1712523	.	+	.	ID=gene1597;Dbxref=GeneID:1097032;Name=SCI35.23;gbkey=Gene;gene=SCI35.23;gene_biotype=protein_coding;gene_synonym=SCI35.23;locus_tag=SCO1601
NC_003888.3	RefSeq	CDS	1712158	1712523	.	+	0	ID=cds1566;Parent=gene1597;Dbxref=Genbank:NP_625877.1,GeneID:1097032;Name=NP_625877.1;Note=SCI35.23%2C unknown%2C len: 121 aa;gbkey=CDS;gene=SCI35.23;product=hypothetical protein;protein_id=NP_625877.1;transl_table=11
NC_003888.3	RefSeq	gene	1712548	1713279	.	-	.	ID=gene1598;Dbxref=GeneID:1097033;Name=SCI35.24c;gbkey=Gene;gene=SCI35.24c;gene_biotype=protein_coding;gene_synonym=SCI35.24c;locus_tag=SCO1602
NC_003888.3	RefSeq	CDS	1712548	1713279	.	-	0	ID=cds1567;Parent=gene1598;Dbxref=Genbank:NP_625878.1,GeneID:1097033;Name=NP_625878.1;Note=SCI35.24c%2C unknown%2C len: 243 aa%3B possible truncated at N-terminus by IS117;gbkey=CDS;gene=SCI35.24c;product=hypothetical protein;protein_id=NP_625878.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1713250	1713293	.	-	.	ID=id2066;Note=identical to SLMININS X15941 Streptomyces lividans mini-circle integration site DNA from 42 to 85;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	1713289	1715819	.	+	.	ID=id2067;Note=IS117: identical to SCMINCIR X15942 Streptomyces coelicolor mini-circle DNA%2C and to cosmid 3C8 from 19443 to 21973;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1713855	1715099	.	+	.	ID=gene1599;Dbxref=GeneID:1097034;Name=SCI35.25;gbkey=Gene;gene=SCI35.25;gene_biotype=protein_coding;gene_synonym=SCI35.25;locus_tag=SCO1603
NC_003888.3	RefSeq	CDS	1713855	1715099	.	+	0	ID=cds1568;Parent=gene1599;Dbxref=Genbank:NP_625879.1,GeneID:1097034;Name=NP_625879.1;Note=SCI35.25%2C probable transposase for IS117%2C len: 414 aa%3B identical to YYM3_STRCO mini-circle hypothetical 45.7 kd protein (414 aa) and similar to many others e.g. YI11_STRCL insertion element IS116 hypothetical 44.8 kD protein (399 aa)%2C fasta scores%3B opt: 324 z-score: 416.9 E(): 5.6e-16%2C 27.4%25 identity in 413 aa overlap;gbkey=CDS;gene=SCI35.25;product=transposase;protein_id=NP_625879.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1714110	1714115	.	+	.	ID=id2068;Dbxref=GeneID:1097034;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature;gene=SCI35.25
NC_003888.3	RefSeq	sequence_feature	1714110	1714115	.	-	.	ID=id2069;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1715151	1715678	.	-	.	ID=gene1600;Dbxref=GeneID:1097035;Name=SCI35.26c;gbkey=Gene;gene=SCI35.26c;gene_biotype=protein_coding;gene_synonym=SCI35.26c;locus_tag=SCO1604
NC_003888.3	RefSeq	CDS	1715151	1715678	.	-	0	ID=cds1569;Parent=gene1600;Dbxref=Genbank:NP_625880.1,GeneID:1097035;Name=NP_625880.1;Note=SCI35.26c%2C unknown ORF in IS117%2C len: 175 aa%3B identical to%2C but longer than%2C YM2_STRCO mini-circle hypothetical 13.3 KD protein (122 aa). Note alternative ORF on opposite strand. Contains TTA Leu codon%3B possible target for action of bldA;gbkey=CDS;gene=SCI35.26c;product=hypothetical protein;protein_id=NP_625880.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1715187	1715191	.	+	.	ID=id2070;Note=possible RBS upstream of SCI35.26;gbkey=RBS
NC_003888.3	RefSeq	gene	1715196	1715549	.	+	.	ID=gene1601;Dbxref=GeneID:1097036;Name=SCI35.27;gbkey=Gene;gene=SCI35.27;gene_biotype=protein_coding;gene_synonym=SCI35.27;locus_tag=SCO1605
NC_003888.3	RefSeq	CDS	1715196	1715549	.	+	0	ID=cds1570;Parent=gene1601;Dbxref=Genbank:NP_625881.1,GeneID:1097036;Name=NP_625881.1;Note=SCI35.27%2C unknown ORF in IS117%2C len: 117 aa%3B identical to YM1_STRCO mini-circle hypothetical 12.9 KD protein (117 aa). Note alternative ORF on opposite strand;gbkey=CDS;gene=SCI35.27;product=hypothetical protein;protein_id=NP_625881.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1715547	1715549	.	-	.	ID=id2071;Dbxref=GeneID:1097035;Note=TTA Leu codon%3B possible target for action of bldA;gbkey=misc_feature;gene=SCI35.26c
NC_003888.3	RefSeq	sequence_feature	1715818	1715861	.	-	.	ID=id2072;Note=identical to SLMININS X15941 Streptomyces lividans mini-circle integration site DNA from 1 to 44;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1715926	1716894	.	+	.	ID=gene1602;Dbxref=GeneID:1097037;Name=SCI35.28;gbkey=Gene;gene=SCI35.28;gene_biotype=protein_coding;gene_synonym=SCI35.28;locus_tag=SCO1606
NC_003888.3	RefSeq	CDS	1715926	1716894	.	+	0	ID=cds1571;Parent=gene1602;Dbxref=Genbank:NP_625882.1,GeneID:1097037;Name=NP_625882.1;Note=SCI35.28%2C possible membrane protein%2C len: 322 aa%3B similar to S. coelicolor TR:O69914 (EMBL:AL023861) hypothetical protein SC3C8.01 (302 aa)%2C fasta scores%3B opt: 730 z-score: 709.0 E(): 3e-32%2C 48.0%25 identity in 275 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCI35.28;product=hypothetical protein;protein_id=NP_625882.1;transl_table=11
NC_003888.3	RefSeq	gene	1716909	1718090	.	-	.	ID=gene1603;Dbxref=GeneID:1097038;Name=SCI35.29c;gbkey=Gene;gene=SCI35.29c;gene_biotype=protein_coding;gene_synonym=SCI35.29c;locus_tag=SCO1607
NC_003888.3	RefSeq	CDS	1716909	1718090	.	-	0	ID=cds1572;Parent=gene1603;Dbxref=Genbank:NP_625883.1,GeneID:1097038;Name=NP_625883.1;Note=SCI35.29c%2C probable serine protease (membrane protein)%2C len: 393 aa%3B similar to many members of the subtilase family e.g. SUBT_BACLI subtilisin carlsberg precursor (379 aa)%2C fasta scores%3B opt: 377 z-score: 509.5 E(): 3.9e-21%2C 38.8%25 identity in 276 aa overlap. Contains probable possible hydrophobic membrane spanning regions (one possible hydrophobic span at the N-terminal region and another one at the C-terminal region)%2C PS00136 Serine proteases%2C subtilase family%2C aspartic acid active sitea and Pfam match to entry PF00082 subtilase%2C Subtilase family of serine proteases%2C score 177.60%2C E-value 2.1e-49;gbkey=CDS;gene=SCI35.29c;product=serine protease membrane protein;protein_id=NP_625883.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1717116	1718006	.	-	.	ID=id2073;Dbxref=GeneID:1097038;Note=Pfam match to entry PF00082 subtilase%2C Subtilase family of serine proteases%2C score 177.60%2C E-value 2.1e-49;gbkey=misc_feature;gene=SCI35.29c
NC_003888.3	RefSeq	sequence_feature	1717878	1717913	.	-	.	ID=id2074;Dbxref=GeneID:1097038;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SCI35.29c
NC_003888.3	RefSeq	gene	1718087	1718800	.	-	.	ID=gene1604;Dbxref=GeneID:1097039;Name=SCI35.30c;gbkey=Gene;gene=SCI35.30c;gene_biotype=protein_coding;gene_synonym=SCI35.30c;locus_tag=SCO1608
NC_003888.3	RefSeq	CDS	1718087	1718800	.	-	0	ID=cds1573;Parent=gene1604;Dbxref=Genbank:NP_625884.1,GeneID:1097039;Name=NP_625884.1;Note=SCI35.30c%2C unknown%2C len: 237 aa%3B start uncertain%2C may be considerably further upstream;gbkey=CDS;gene=SCI35.30c;product=hypothetical protein;protein_id=NP_625884.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1718099	1718102	.	-	.	ID=id2075;Dbxref=GeneID:1097039;Note=possible RBS upstream of SCI35.29c;gbkey=RBS;gene=SCI35.30c
NC_003888.3	RefSeq	gene	1720261	1721469	.	+	.	ID=gene1605;Dbxref=GeneID:1097040;Name=SCI35.31;gbkey=Gene;gene=SCI35.31;gene_biotype=protein_coding;gene_synonym=SCI35.31;locus_tag=SCO1609
NC_003888.3	RefSeq	CDS	1720261	1721469	.	+	0	ID=cds1574;Parent=gene1605;Dbxref=Genbank:NP_625885.1,GeneID:1097040;Name=NP_625885.1;Note=SCI35.31%2C unknown%2C len: 402 aa%3B similar to a hypothetical protein from M. tuberculosis TR:O06802 (EMBL:Z95890) MTCY28.35 (414 aa)%2C fasta scores%3B opt: 1341 z-score: 1649.4 E(): 0%2C 53.8%25 identity in 398 aa overlap;gbkey=CDS;gene=SCI35.31;product=hypothetical protein;protein_id=NP_625885.1;transl_table=11
NC_003888.3	RefSeq	gene	1721502	1722461	.	-	.	ID=gene1606;Dbxref=GeneID:1097041;Name=SCI35.32c;gbkey=Gene;gene=SCI35.32c;gene_biotype=protein_coding;gene_synonym=SCI35.32c;locus_tag=SCO1610
NC_003888.3	RefSeq	CDS	1721502	1722461	.	-	0	ID=cds1575;Parent=gene1606;Dbxref=Genbank:NP_625886.1,GeneID:1097041;Name=NP_625886.1;Note=SCI35.32c%2C possible membrane protein%2C len: 319 aa%3B similar to TR:Q9XAN5 (EMBL:AL079355) Streptomyces coelicolor  membrane protein SC4C6.05c%2C 347 aa%3B fasta scores: opt: 474 Z-score: 431.9 E(): 2e-16%3B 37.853%25 identity in 354 aa overlap. Contains possible transmembrane domain at around aa 80;gbkey=CDS;gene=SCI35.32c;product=hypothetical protein;protein_id=NP_625886.1;transl_table=11
NC_003888.3	RefSeq	gene	1722499	1723281	.	-	.	ID=gene1607;Dbxref=GeneID:1097042;Name=SCI35.33c;gbkey=Gene;gene=SCI35.33c;gene_biotype=protein_coding;gene_synonym=SCI35.33c;locus_tag=SCO1611
NC_003888.3	RefSeq	CDS	1722499	1723281	.	-	0	ID=cds1576;Parent=gene1607;Dbxref=Genbank:NP_625887.1,GeneID:1097042;Name=NP_625887.1;Note=SCI35.33c%2C probable dehydrogenase%2C len: 260 aa%3B similar to members of the short-chain dehydrogenases/reductases family e.g. LINX_PSEPA 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase (250 aa)%2C fasta scores%3B opt: 532 z-score: 629.1 E(): 8.5e-28%2C 36.0%25 identity in 250 aa overlap. Contains Pfam matches to entry PF00106 adh_short%2C Alcohol /other%2C score 230.30%2C E-value 2.7e-65%2C and to entry PF00678 adh_short_C2%2C Short chain dehydrogenase /reductase C-terminus%2C score 41.20%2C E-value 2.4e-08;gbkey=CDS;gene=SCI35.33c;product=3-oxoacyl-ACP reductase;protein_id=NP_625887.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1722538	1722630	.	-	.	ID=id2076;Dbxref=GeneID:1097042;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase /reductase%3D 2.4e-08;gbkey=misc_feature;gene=SCI35.33c
NC_003888.3	RefSeq	sequence_feature	1722697	1723245	.	-	.	ID=id2077;Dbxref=GeneID:1097042;Note=Pfam match to entry PF00106 adh_short%2C Alcohol /other dehydrogenases%2C short chain type%2C score 230.30%2C E-value 2.7e-65;gbkey=misc_feature;gene=SCI35.33c
NC_003888.3	RefSeq	gene	1723278	1724729	.	-	.	ID=gene1608;Dbxref=GeneID:1097043;Name=SCI35.34c;gbkey=Gene;gene=SCI35.34c;gene_biotype=protein_coding;gene_synonym=SCI35.34c;locus_tag=SCO1612
NC_003888.3	RefSeq	CDS	1723278	1724729	.	-	0	ID=cds1577;Parent=gene1608;Dbxref=Genbank:NP_625888.1,GeneID:1097043;Name=NP_625888.1;Note=SCI35.34c%2C probable aldehyde dehydrogenase%2C len: 483 aa%3B similar to many e.g. DHAB_RHIME betaine aldehyde dehydrogenase (487 aa)%2C fasta scores%3B opt: 1113 z-score: 1170.6 E(): 0%2C 42.4%25 identity in 462 aa overlap. Contains PS00687 Aldehyde dehydrogenases glutamic acid active site%2C PS00070 Aldehyde dehydrogenases cysteine active site and Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenases%2C score 569.80%2C E-value 1.7e-167;gbkey=CDS;gene=SCI35.34c;product=aldehyde dehydrogenase;protein_id=NP_625888.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1723311	1724675	.	-	.	ID=id2078;Dbxref=GeneID:1097043;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenases%2C score 569.80%2C E-value 1.7e-167;gbkey=misc_feature;gene=SCI35.34c
NC_003888.3	RefSeq	sequence_feature	1723866	1723901	.	-	.	ID=id2079;Dbxref=GeneID:1097043;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SCI35.34c
NC_003888.3	RefSeq	sequence_feature	1723962	1723985	.	-	.	ID=id2080;Dbxref=GeneID:1097043;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SCI35.34c
NC_003888.3	RefSeq	gene	1724726	1726114	.	-	.	ID=gene1609;Dbxref=GeneID:1097044;Name=SCI35.35c;gbkey=Gene;gene=SCI35.35c;gene_biotype=protein_coding;gene_synonym=SCI35.35c;locus_tag=SCO1613
NC_003888.3	RefSeq	CDS	1724726	1726114	.	-	0	ID=cds1578;Parent=gene1609;Dbxref=Genbank:NP_625889.1,GeneID:1097044;Name=NP_625889.1;Note=SCI35.35c%2C possible glutamine synthetase%2C len: 462 aa%3B similar to many e.g. GLNA_PYRWO glutamine synthetase I (EC 6.3.1.2) (439 aa)%2C fasta scores%3B opt: 536 z-score: 653.9 E(): 3.6e-29%2C 31.6%25 identity in 450 aa overlap. Contains Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase%2C score 123.40%2C E-value 9.4e-39;gbkey=CDS;gene=SCI35.35c;product=glutamine synthetase;protein_id=NP_625889.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1724996	1725832	.	-	.	ID=id2081;Dbxref=GeneID:1097044;Note=Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase%2C score 123.40%2C E-value 9.4e-39;gbkey=misc_feature;gene=SCI35.35c
NC_003888.3	RefSeq	ribosome_entry_site	1726178	1726181	.	+	.	ID=id2082;Note=possible RBS upstream of SCI35.36;gbkey=RBS
NC_003888.3	RefSeq	gene	1726192	1726902	.	+	.	ID=gene1610;Dbxref=GeneID:1097045;Name=SCI35.36;gbkey=Gene;gene=SCI35.36;gene_biotype=protein_coding;gene_synonym=SCI35.36;locus_tag=SCO1614
NC_003888.3	RefSeq	CDS	1726192	1726902	.	+	0	ID=cds1579;Parent=gene1610;Dbxref=Genbank:NP_625890.1,GeneID:1097045;Name=NP_625890.1;Note=SCI35.36%2C probable transcriptional regulator%2C len: 236 aa%3B similar to many members of the gntR family e.g. GLCC_ECOLI Glc operon transcriptional activator (254 aa)%2C fasta scores%3B opt: 183 z-score: 269.1 E(): 9.7e-08%2C 28.3%25 identity in 219 aa overlap. Contains PS00043 Bacterial regulatory proteins%2C gntR family signature%2C probable helix-turn-helix motif at aa 42-63 (Score 1486%2C +4.25 SD)%2C and Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 64.70%2C E-value 2e-18;gbkey=CDS;gene=SCI35.36;product=transcriptional regulator;protein_id=NP_625890.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1726252	1726437	.	+	.	ID=id2083;Dbxref=GeneID:1097045;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 64.70%2C E-value 2e-18;gbkey=misc_feature;gene=SCI35.36
NC_003888.3	RefSeq	sequence_feature	1726309	1726383	.	+	.	ID=id2084;Dbxref=GeneID:1097045;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCI35.36
NC_003888.3	RefSeq	gene	1726978	1727706	.	+	.	ID=gene1611;Dbxref=GeneID:1097046;Name=SCI35.37;gbkey=Gene;gene=SCI35.37;gene_biotype=protein_coding;gene_synonym=SCI35.37;locus_tag=SCO1615
NC_003888.3	RefSeq	CDS	1726978	1727706	.	+	0	ID=cds1580;Parent=gene1611;Dbxref=Genbank:NP_625891.1,GeneID:1097046;Name=NP_625891.1;Note=SCI35.37%2C unknown%2C len: 726 aa%3B similar to hypotheticals e.g. YCJL_ECOLI (258 aa)%2C fasta scores%3B opt: 216 z-score: 265.7 E(): 1.5e-07%2C 31.8%25 identity in 201 aa overlap;gbkey=CDS;gene=SCI35.37;product=hypothetical protein;protein_id=NP_625891.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1727642	1727880	.	+	.	ID=id2085;Note=near-perfect 238 bp repeat;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	1727880	1728109	.	+	.	ID=id2086;Note=near-perfect 238 bp repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1728427	1729404	.	-	.	ID=gene1612;Dbxref=GeneID:1097047;Name=SCI35.38c;gbkey=Gene;gene=SCI35.38c;gene_biotype=protein_coding;gene_synonym=SCI35.38c;locus_tag=SCO1616
NC_003888.3	RefSeq	CDS	1728427	1729404	.	-	0	ID=cds1581;Parent=gene1612;Dbxref=Genbank:NP_625892.1,GeneID:1097047;Name=NP_625892.1;Note=SCI35.38c%2C probable transcriptional regulator%2C len: 325 aa%3B similar to many members of the lysR family CBBR_RHORU RUBISCO operon transcriptional regulator (298 aa)%2C fasta scores%3B opt: 394 z-score: 410.2 E(): 1.3e-15%2C 30.2%25 identity in 295 aa overlap. Contains PS00044 Bacterial regulatory proteins%2C lysR family signature%2C possible helix-turn-helix motif at aa 53-74 (Score 1391%2C +3.92 SD)%2C and Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix proteins%2C lysR family%2C score 129.30%2C E-value 7e-35;gbkey=CDS;gene=SCI35.38c;product=transcriptional regulator;protein_id=NP_625892.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1728862	1729290	.	-	.	ID=id2087;Dbxref=GeneID:1097047;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix proteins%2C lysR family%2C score 129.30%2C E-value 7e-35;gbkey=misc_feature;gene=SCI35.38c
NC_003888.3	RefSeq	sequence_feature	1729156	1729248	.	-	.	ID=id2088;Dbxref=GeneID:1097047;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCI35.38c
NC_003888.3	RefSeq	gene	1729475	1730659	.	+	.	ID=gene1613;Dbxref=GeneID:1097048;Name=SCI35.39;gbkey=Gene;gene=SCI35.39;gene_biotype=protein_coding;gene_synonym=SCI35.39;locus_tag=SCO1617
NC_003888.3	RefSeq	CDS	1729475	1730659	.	+	0	ID=cds1582;Parent=gene1613;Dbxref=Genbank:NP_625893.1,GeneID:1097048;Name=NP_625893.1;Note=SCI35.39%2C probable integral membrane protein%2C len: 394 aa%3B similar to several hypothetical membrane proteins e.g. Rhodococcus erythropolis TR:O07448 (EMBL:AF002247) (295 aa)%2C fasta scores%3B opt: 868 z-score: 961.0 E(): 0%2C 44.9%25 identity in 292 aa overlap;gbkey=CDS;gene=SCI35.39;product=hypothetical protein;protein_id=NP_625893.1;transl_table=11
NC_003888.3	RefSeq	gene	1730586	1731305	.	-	.	ID=gene1614;Dbxref=GeneID:1097049;Name=SCI35.40c;gbkey=Gene;gene=SCI35.40c;gene_biotype=protein_coding;gene_synonym=SCI35.40c,SCI41.01c;locus_tag=SCO1618
NC_003888.3	RefSeq	CDS	1730586	1731305	.	-	0	ID=cds1583;Parent=gene1614;Dbxref=Genbank:NP_733540.1,GeneID:1097049;Name=NP_733540.1;Note=SCI41.01c%2C hypothetical protein%2C len: >212 aa. Low similarity with C-terminus of TR:BAA80034 (EMBL:AP000060) Aeropyrum pernix 493 aa hypothetical protein APE1049 (493 aa)%3B fasta scores: opt: 183 z-score: 217.5 E(): 9.6e-05%3B 29.2%25 identity in 202 aa overlap. Overlaps and extends StI35.40c~SCI35.40c%2C unknown. partial CDS%2C len: >68 aa;gbkey=CDS;gene=SCI35.40c;product=hypothetical protein;protein_id=NP_733540.1;transl_table=11
NC_003888.3	RefSeq	gene	1731316	1731885	.	-	.	ID=gene1615;Dbxref=GeneID:1097050;Name=SCI41.02c;gbkey=Gene;gene=SCI41.02c;gene_biotype=protein_coding;gene_synonym=SCI41.02c;locus_tag=SCO1619
NC_003888.3	RefSeq	CDS	1731316	1731885	.	-	0	ID=cds1584;Parent=gene1615;Dbxref=Genbank:NP_625894.1,GeneID:1097050;Name=NP_625894.1;Note=SCI41.02c%2C possible transcriptional regulatory protein%2C len: 189 aa%3B similarity with TR:O53759 (EMBL:AL021933) Mycobacterium tuberculosis regulatory protein (140 aa)%3B fasta scores: opt: 164 z-score: 208.0 E(): 0.00032%2C 31.3%25 identity in 112 aa overlap. Contains Pfam match PF01381 HTH_3%2C Helix-turn-helix. Contains probable helix-turn-helix motif at aa 25-46 (Score 1293%2C +3.59 SD);gbkey=CDS;gene=SCI41.02c;product=regulatory protein;protein_id=NP_625894.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1731679	1731843	.	-	.	ID=id2089;Dbxref=GeneID:1097050;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 48.40%2C E-value 1.6e-10;gbkey=misc_feature;gene=SCI41.02c
NC_003888.3	RefSeq	ribosome_entry_site	1731894	1731897	.	-	.	ID=id2090;gbkey=RBS
NC_003888.3	RefSeq	gene	1732259	1734874	.	-	.	ID=gene1616;Dbxref=GeneID:1097051;Name=opuABC;gbkey=Gene;gene=opuABC;gene_biotype=protein_coding;gene_synonym=opuABC,SCI41.03c;locus_tag=SCO1620
NC_003888.3	RefSeq	CDS	1732259	1734874	.	-	0	ID=cds1585;Parent=gene1616;Dbxref=Genbank:NP_625895.1,GeneID:1097051;Name=NP_625895.1;Note=SCI41.03c%2C opuABC glycine/betaine transport system permease%2C len: 871 aa. N-terminal region highly similar to SW:OPUB_BACSU (P46921) Bacillus subtilis glycine/betaine transport system permease %3B fasta scores: opt: 847 z-score: 884.1 E(): 0%3B 47.2%25 identity in 269 aa overlap%2C and C-terminal region similar to SW:OPUC_BACSU glyine betaine-binding protein precusor%3B fasta scores%3B opt: 322 z-score: 339.7 E(): 1.5e-11%3B 32.8%25 identity in 271 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C binding-protein-dependent transport systems inner membrane component and prosite match to entry PS00402 Binding-protein-dependent transport systems inner membrane component sign;gbkey=CDS;gene=opuABC;product=glycine/betaine ABC transporter permease;protein_id=NP_625895.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1734128	1734364	.	-	.	ID=id2091;Dbxref=GeneID:1097051;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 54.80%2C E-value 1.9e-12;gbkey=misc_feature;gene=opuABC
NC_003888.3	RefSeq	sequence_feature	1734275	1734361	.	-	.	ID=id2092;Dbxref=GeneID:1097051;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=opuABC
NC_003888.3	RefSeq	gene	1734867	1735961	.	-	.	ID=gene1617;Dbxref=GeneID:1097052;Name=opuAA;gbkey=Gene;gene=opuAA;gene_biotype=protein_coding;gene_synonym=opuAA,SCI41.04c;locus_tag=SCO1621
NC_003888.3	RefSeq	CDS	1734867	1735961	.	-	0	ID=cds1586;Parent=gene1617;Dbxref=Genbank:NP_625896.1,GeneID:1097052;Name=NP_625896.1;Note=SCI41.04c%2C opuAA glycine/betaine transport ATP-binding protein%2C len: 364 aa. Highly similar to SW:OPUA_BACSU (P46920) Bacillus subtilis glycine/betaine transport ATP-binding protein%3B fasta scores: opt: 1093 z-score: 1200.6 E():0%3B 52.4%25 identity in 328 aa overlap. Contains Pfam match to PF00005 ABC_tran%2C ABC transporter and PS00211 ABC transporters family signature.;gbkey=CDS;gene=opuAA;product=glycine/betaine transport ATP-binding protein;protein_id=NP_625896.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1734885	1734888	.	-	.	ID=id2093;Dbxref=GeneID:1097052;gbkey=RBS;gene=opuAA
NC_003888.3	RefSeq	sequence_feature	1735239	1735802	.	-	.	ID=id2094;Dbxref=GeneID:1097052;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 225.70%2C E-value 6.9e-64;gbkey=misc_feature;gene=opuAA
NC_003888.3	RefSeq	sequence_feature	1735425	1735469	.	-	.	ID=id2095;Dbxref=GeneID:1097052;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=opuAA
NC_003888.3	RefSeq	sequence_feature	1735758	1735781	.	-	.	ID=id2096;Dbxref=GeneID:1097052;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=opuAA
NC_003888.3	RefSeq	ribosome_entry_site	1735967	1735970	.	-	.	ID=id2097;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1736136	1736139	.	+	.	ID=id2098;gbkey=RBS
NC_003888.3	RefSeq	gene	1736156	1737061	.	+	.	ID=gene1618;Dbxref=GeneID:1097053;Name=SCI41.05;gbkey=Gene;gene=SCI41.05;gene_biotype=protein_coding;gene_synonym=SCI41.05;locus_tag=SCO1622
NC_003888.3	RefSeq	CDS	1736156	1737061	.	+	0	ID=cds1587;Parent=gene1618;Dbxref=Genbank:NP_625897.1,GeneID:1097053;Name=NP_625897.1;Note=SCI41.05%2C probable 5'-3' exonuclease%2C len: 301 aa. High similarity to SW:EX53_MYCTU (EMBL:Z73966) Mycobacterium tuberculosis potential 5'-3' exonuclease (EC 3.1.11.-)%2C 393 aa%3B fasta scores: opt: 964 z-score: 1025.6 E(): 0%3B 52.3%25 identity in 308 aa overlap. Contains Pfam match to entry PF01367 5_3_exonuclease%2C 5'-3' exonuclease.;gbkey=CDS;gene=SCI41.05;product=5'-3' exonuclease;protein_id=NP_625897.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1736156	1737040	.	+	.	ID=id2099;Dbxref=GeneID:1097053;Note=Pfam match to entry PF01367 5_3_exonuclease%2C 5'-3' exonuclease%2C score 208.70%2C E-value 9e-59;gbkey=misc_feature;gene=SCI41.05
NC_003888.3	RefSeq	ribosome_entry_site	1737158	1737161	.	+	.	ID=id2100;gbkey=RBS
NC_003888.3	RefSeq	gene	1737167	1738009	.	+	.	ID=gene1619;Dbxref=GeneID:1097054;Name=SCI41.06;gbkey=Gene;gene=SCI41.06;gene_biotype=protein_coding;gene_synonym=SCI41.06;locus_tag=SCO1623
NC_003888.3	RefSeq	CDS	1737167	1738009	.	+	0	ID=cds1588;Parent=gene1619;Dbxref=Genbank:NP_625898.1,GeneID:1097054;Name=NP_625898.1;Note=SCI41.06%2C unknown%2C len: 280 aa%3B similar to e.g. YX26_MYCTU hypothetical 30.6 KD protein CY274.26C%2C 283 aa%3B fasta scores: opt: 641 z-score: 744.6 E()0%3B 45.9%25 identity in 294 aa overlap;gbkey=CDS;gene=SCI41.06;product=hypothetical protein;protein_id=NP_625898.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1738040	1738447	.	+	.	ID=id2101;Note=contains several short GC-rich direct repeats;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1738408	1738998	.	-	.	ID=gene1620;Dbxref=GeneID:1097055;Name=SCI41.07c;gbkey=Gene;gene=SCI41.07c;gene_biotype=protein_coding;gene_synonym=SCI41.07c;locus_tag=SCO1624
NC_003888.3	RefSeq	CDS	1738408	1738998	.	-	0	ID=cds1589;Parent=gene1620;Dbxref=Genbank:NP_625899.1,GeneID:1097055;Name=NP_625899.1;Note=SCI41.07c%2C probable acetyltransferase%2C len: 165 aa. Similar to various acetyltransferases%2C e.g. SW:RIML_ECOLI (EMBL:X15860) Escherichia coli ribosomal-protein-serine acetyltransferase%2C 179 aa%3B fasta scores: opt: 181 z-score: 247.2 E(): 2.1e-06%3B 28.0%25 identity in 132 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCI41.07c;product=acetyltransferase;protein_id=NP_625899.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1738492	1738902	.	-	.	ID=id2102;Dbxref=GeneID:1097055;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 32.70%2C E-value 8.7e-06;gbkey=misc_feature;gene=SCI41.07c
NC_003888.3	RefSeq	gene	1739097	1740071	.	+	.	ID=gene1621;Dbxref=GeneID:1097056;Name=SCI41.08;gbkey=Gene;gene=SCI41.08;gene_biotype=protein_coding;gene_synonym=SCI41.08;locus_tag=SCO1625
NC_003888.3	RefSeq	CDS	1739097	1740071	.	+	0	ID=cds1590;Parent=gene1621;Dbxref=Genbank:NP_625900.1,GeneID:1097056;Name=NP_625900.1;Note=SCI41.08%2C probable ribosomal pseudouridine synthase%2C len: 324 aa. Similar to SW:RLUA_ECOLI (EMBL:D10483) Escherichia coli ribosomal large subunit pseudouridine synthase 218 aa%3B fasta scores: opt: 262 z-score: 302.0 E(): 1.9e-09%3B 31.7%25 identity in 221 aa overlap. Contains Pfam match to entry PF00849 YABO%2C Hypothetical yabO/yceC/sfhB family also PS01129 Rlu family of pseudouridine synthase signature;gbkey=CDS;gene=SCI41.08;product=ribosomal pseudouridine synthase;protein_id=NP_625900.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1739388	1739861	.	+	.	ID=id2103;Dbxref=GeneID:1097056;Note=Pfam match to entry PF00849 YABO%2C Hypothetical yabO/yceC/sfhB family%2C score 90.30%2C E-value 3.9e-23;gbkey=misc_feature;gene=SCI41.08
NC_003888.3	RefSeq	sequence_feature	1739520	1739564	.	+	.	ID=id2104;Dbxref=GeneID:1097056;Note=PS01129 Rlu family of pseudouridine synthase signature;gbkey=misc_feature;gene=SCI41.08
NC_003888.3	RefSeq	gene	1740065	1741561	.	-	.	ID=gene1622;Dbxref=GeneID:1097057;Name=SCI41.09c;gbkey=Gene;gene=SCI41.09c;gene_biotype=protein_coding;gene_synonym=SCI41.09c;locus_tag=SCO1626
NC_003888.3	RefSeq	CDS	1740065	1741561	.	-	0	ID=cds1591;Parent=gene1622;Dbxref=Genbank:NP_625901.1,GeneID:1097057;Name=NP_625901.1;Note=SCI41.09c%2C possible cytochrome P450%2C len: 498 aa. Similar to cytochrome P450 family%2C e.g. SW:CPXF_STRGO (EMBL:M32239) Streptomyces griseolus cytochrome P450-SU2 (EC 1.14.-.-) (P450-CVB%2C 402 aa)%3B fasta scores: opt: 492 z-score: 485.2 E(): 1.2e-19%3B 31.0%25 identity in 407 aa overlap. Contains Pfam match to entry PF00067 p450%2C cytochrome P450.;gbkey=CDS;gene=SCI41.09c;product=cytochrome P450;protein_id=NP_625901.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1740296	1741507	.	-	.	ID=id2105;Dbxref=GeneID:1097057;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score -18.40%2C E-value 2.2e-07;gbkey=misc_feature;gene=SCI41.09c
NC_003888.3	RefSeq	sequence_feature	1740452	1740481	.	-	.	ID=id2106;Dbxref=GeneID:1097057;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SCI41.09c
NC_003888.3	RefSeq	ribosome_entry_site	1741569	1741572	.	-	.	ID=id2107;gbkey=RBS
NC_003888.3	RefSeq	gene	1741637	1742167	.	-	.	ID=gene1623;Dbxref=GeneID:1097058;Name=cvnD9;gbkey=Gene;gene=cvnD9;gene_biotype=protein_coding;gene_synonym=cvnD9,SCI41.10c;locus_tag=SCO1627
NC_003888.3	RefSeq	CDS	1741637	1742167	.	-	0	ID=cds1592;Parent=gene1623;Dbxref=Genbank:NP_625902.1,GeneID:1097058;Name=NP_625902.1;Note=SCI41.10c%2C cvnD9%2C probable ATP-GTP binding protein%2C len: 176 aa. Highly similar to TR:CAB41559 (EMBL:AL049727) Streptomyces coelicolor SC9B1.13C ATP/GTP-binding protein%2C 181 aa%3B fasta scores: opt: 684 z-score: 845.9 E():0%3B 63.0%25 identity in 173 aa overlap. Contains Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=cvnD9;product=ATP-GTP binding protein;protein_id=NP_625902.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1742141	1742164	.	-	.	ID=id2108;Dbxref=GeneID:1097058;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD9
NC_003888.3	RefSeq	gene	1742238	1742654	.	-	.	ID=gene1624;Dbxref=GeneID:1097059;Name=cvnC9;gbkey=Gene;gene=cvnC9;gene_biotype=protein_coding;gene_synonym=cvnC9,SCI41.11c;locus_tag=SCO1628
NC_003888.3	RefSeq	CDS	1742238	1742654	.	-	0	ID=cds1593;Parent=gene1624;Dbxref=Genbank:NP_625903.1,GeneID:1097059;Name=NP_625903.1;Note=SCI41.11c%2C cvnC9%2C hypothetical protein%2C len: 138 aa. Similar to TR:CAB41560 (EMBL:AL049727) Streptomyces coelicolor SC9B1.14C hypothetical 12.8 kd protein%2C 119 aa%3B fasta scores: opt: 240 z-score: 262.1 E(): 3.1e-07%3B 45.0%25 identity in 109 aa overlap and to TR:Q9AJP2 (EMBL:AB044803) Streptomyces griseus ORF3%2C 123 aa%3B fasta scores: opt: 472 Z-score: 497.8 E(): 4.3e-20%3B 58.273%25 identity in 139 aa overlap;gbkey=CDS;gene=cvnC9;product=hypothetical protein;protein_id=NP_625903.1;transl_table=11
NC_003888.3	RefSeq	gene	1742651	1743058	.	-	.	ID=gene1625;Dbxref=GeneID:1097060;Name=cvnB9;gbkey=Gene;gene=cvnB9;gene_biotype=protein_coding;gene_synonym=cvnB9,SCI41.12c;locus_tag=SCO1629
NC_003888.3	RefSeq	CDS	1742651	1743058	.	-	0	ID=cds1594;Parent=gene1625;Dbxref=Genbank:NP_625904.1,GeneID:1097060;Name=NP_625904.1;Note=SCI41.12c%2C cvnB9%2C unknown%2C len: 135 aa. Similar to TR:CAB41561 (EMBL:AL049727) Streptomyces coelicolor SC9B1.15C hypothetical 14.3 kD protein%2C 137 aa%3B fasta scores: opt: 266 z-score: 339.1 E(): 1.6e-11%3B 37.0%25 identity in 127 aa overlap and to TR:Q9AJP3 (EMBL:AB044803) Streptomyces girseus ORF2%2C 135 aa%3B fasta scores: opt: 559 Z-score: 671.5 E(): 9e-30%3B 62.687%25 identity in 134 aa overlap;gbkey=CDS;gene=cvnB9;product=hypothetical protein;protein_id=NP_625904.1;transl_table=11
NC_003888.3	RefSeq	gene	1743055	1744680	.	-	.	ID=gene1626;Dbxref=GeneID:1097061;Name=cvnA9;gbkey=Gene;gene=cvnA9;gene_biotype=protein_coding;gene_synonym=cvnA9,SCI41.13c;locus_tag=SCO1630
NC_003888.3	RefSeq	CDS	1743055	1744680	.	-	0	ID=cds1595;Parent=gene1626;Dbxref=Genbank:NP_625905.1,GeneID:1097061;Name=NP_625905.1;Note=SCI41.13c%2C cvnA9%2C possible integral membrane protein%2C len: 541 aa. N-terminal domain similar to TR:CAB45635 (EMBL:AL079356) Streptomyces coelicolor SC6G9.44C possible histidine sensor kinase (806 aa)%3B fasta scores: opt: 423 z-score: 422.2 E(): 3.8e-16%3B 26.4%25 identity in 481 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=cvnA9;product=hypothetical protein;protein_id=NP_625905.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1744687	1744691	.	-	.	ID=id2109;gbkey=RBS
NC_003888.3	RefSeq	gene	1745083	1747935	.	-	.	ID=gene1627;Dbxref=GeneID:1097062;Name=SCI41.14c;gbkey=Gene;gene=SCI41.14c;gene_biotype=protein_coding;gene_synonym=SCI41.14c;locus_tag=SCO1631
NC_003888.3	RefSeq	CDS	1745083	1747935	.	-	0	ID=cds1596;Parent=gene1627;Dbxref=Genbank:NP_625906.1,GeneID:1097062;Name=NP_625906.1;Note=SCI41.14c%2C possible helicase%2C len: 950 aa. Similar to TR:O69801 (EMBL:AJ223310) Streptomyces avermitilis SAB3 helicase%2C 612 aa%3B fasta scores: opt: 2382 z-score: 2658.3 E(): 0%3B 68.9%25 identity in 602 aa overlap. Contains Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase and PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from 554 to 586 (33 residues%2C max score: 1.477%2C probability 0.92).;gbkey=CDS;gene=SCI41.14c;product=helicase;protein_id=NP_625906.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1747255	1747815	.	-	.	ID=id2110;Dbxref=GeneID:1097062;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 99.00%2C E-value 2.2e-30;gbkey=misc_feature;gene=SCI41.14c
NC_003888.3	RefSeq	sequence_feature	1747699	1747722	.	-	.	ID=id2111;Dbxref=GeneID:1097062;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI41.14c
NC_003888.3	RefSeq	gene	1748003	1748953	.	-	.	ID=gene1628;Dbxref=GeneID:1097063;Name=SCI41.15c;gbkey=Gene;gene=SCI41.15c;gene_biotype=protein_coding;gene_synonym=SCI41.15c;locus_tag=SCO1632
NC_003888.3	RefSeq	CDS	1748003	1748953	.	-	0	ID=cds1597;Parent=gene1628;Dbxref=Genbank:NP_625907.1,GeneID:1097063;Name=NP_625907.1;Note=SCI41.15c%2C hypothetical integral membrane protein%2C len: 316 aa. Similarity to SW:Q10702 SW:YK93_MYCTU Mycobacterium tuberculosis unknown membrane protein RV2093c%2C 308 aa%3B fasta scores: opt: 638 z-score: 762.5 E():0%3B 40.1%25 identity in 289 aa overlap. Contains Pfam match to entry PF00902 UPF0032%2C MttB family.;gbkey=CDS;gene=SCI41.15c;product=hypothetical protein;protein_id=NP_625907.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1748216	1748875	.	-	.	ID=id2112;Dbxref=GeneID:1097063;Note=Pfam match to entry PF00902 UPF0032%2C MttB family%2C score 158.30%2C E-value 1.3e-43;gbkey=misc_feature;gene=SCI41.15c
NC_003888.3	RefSeq	gene	1749001	1749288	.	-	.	ID=gene1629;Dbxref=GeneID:1097064;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;gene_synonym=SCI41.16c;locus_tag=SCO1633
NC_003888.3	RefSeq	CDS	1749001	1749288	.	-	0	ID=cds1598;Parent=gene1629;Dbxref=Genbank:NP_625908.1,GeneID:1097064;Name=NP_625908.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;product=twin arginine translocase A;protein_id=NP_625908.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1749298	1749303	.	-	.	ID=id2113;gbkey=RBS
NC_003888.3	RefSeq	gene	1749565	1749759	.	-	.	ID=gene1630;Dbxref=GeneID:1097065;Name=SCI41.17c;gbkey=Gene;gene=SCI41.17c;gene_biotype=protein_coding;gene_synonym=SCI41.17c;locus_tag=SCO1634
NC_003888.3	RefSeq	CDS	1749565	1749759	.	-	0	ID=cds1599;Parent=gene1630;Dbxref=Genbank:NP_625909.1,GeneID:1097065;Name=NP_625909.1;Note=SCI41.17c%2C small membrane protein%2C len: 64 aa. Contains probable coiled-coil from 28 to 64 (37 residues%2C max score: 1.439%2C probability 0.85) and possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCI41.17c;product=small membrane protein;protein_id=NP_625909.1;transl_table=11
NC_003888.3	RefSeq	gene	1749770	1750081	.	-	.	ID=gene1631;Dbxref=GeneID:1097066;Name=SCI41.18c;gbkey=Gene;gene=SCI41.18c;gene_biotype=protein_coding;gene_synonym=SCI41.18c;locus_tag=SCO1635
NC_003888.3	RefSeq	CDS	1749770	1750081	.	-	0	ID=cds1600;Parent=gene1631;Dbxref=Genbank:NP_625910.1,GeneID:1097066;Name=NP_625910.1;Note=SCI41.18c%2C unknown%2C len: 103 aa;gbkey=CDS;gene=SCI41.18c;product=hypothetical protein;protein_id=NP_625910.1;transl_table=11
NC_003888.3	RefSeq	gene	1750078	1751160	.	-	.	ID=gene1632;Dbxref=GeneID:1097067;Name=SCI41.19c;gbkey=Gene;gene=SCI41.19c;gene_biotype=protein_coding;gene_synonym=SCI41.19c;locus_tag=SCO1636
NC_003888.3	RefSeq	CDS	1750078	1751160	.	-	0	ID=cds1601;Parent=gene1632;Dbxref=Genbank:NP_625911.1,GeneID:1097067;Name=NP_625911.1;Note=SCI41.19c%2C unknown%2C len: 360 aa. Similar to various hypothetical proteins%2C e.g. TR:P72265 (EMBL:Z82004) Rhodococcus erythropolis ORF11%2C 326 aa%3B fasta scores: opt: 694 z-score: 768.9 E(): 0%3B 39.8%25 identity in 322 aa overlap;gbkey=CDS;gene=SCI41.19c;product=hypothetical protein;protein_id=NP_625911.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1750084	1750088	.	-	.	ID=id2114;Dbxref=GeneID:1097067;gbkey=RBS;gene=SCI41.19c
NC_003888.3	RefSeq	ribosome_entry_site	1751172	1751175	.	-	.	ID=id2115;gbkey=RBS
NC_003888.3	RefSeq	gene	1751179	1752132	.	-	.	ID=gene1633;Dbxref=GeneID:1097068;Name=SCI41.20c;gbkey=Gene;gene=SCI41.20c;gene_biotype=protein_coding;gene_synonym=SCI41.20c;locus_tag=SCO1637
NC_003888.3	RefSeq	CDS	1751179	1752132	.	-	0	ID=cds1602;Parent=gene1633;Dbxref=Genbank:NP_625912.1,GeneID:1097068;Name=NP_625912.1;Note=SCI41.20c%2C unknown%2C len: 317 aa. Similar to various hypothetical proteins%2C e.g. TR:P72264 (EMBL:Z82004) Rhodococcus erythropolis ORF10%2C 330 aa%3B fasta scores: opt: 578 z-score: 682.7 E(): 1.2e-30%3B 39.5%25 identity in 332 aa overlap;gbkey=CDS;gene=SCI41.20c;product=hypothetical protein;protein_id=NP_625912.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1752139	1752144	.	-	.	ID=id2116;gbkey=RBS
NC_003888.3	RefSeq	gene	1752270	1752641	.	-	.	ID=gene1634;Dbxref=GeneID:1097069;Name=fkbP;gbkey=Gene;gene=fkbP;gene_biotype=protein_coding;gene_synonym=fkbP,SCI41.21c;locus_tag=SCO1638
NC_003888.3	RefSeq	CDS	1752270	1752641	.	-	0	ID=cds1603;Parent=gene1634;Dbxref=Genbank:NP_625913.1,GeneID:1097069;Name=NP_625913.1;Note=SCI41.21c%2C fkbP%2C peptidyl-prolyl cis-trans isomerase%2C len: 123 aa. Highly similar to SW:FKBP_STRCH (EMBL:M98428) Streptomyces chrysomallus FK506-binding protein (peptidyl-prolyl cis-trans isomerase - PPIase%2C 124 aa)%3B fasta scores: opt: 678 z-score: 808.5 E(): 0%3B 78.2%25 identity in 124 aa overlap. Contains Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerases also PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1 and PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2. Similarities with C-terminal domain of Streptomyces coelicolor StI41.22c (335 aa)%3B fasta scores: opt: 263 z-score: 285.2 E(): 1.4e-10%3B 40.2%25 identity in 117 aa overlap. C-terminal contains signal peptide;gbkey=CDS;gene=fkbP;product=peptidyl-prolyl cis-trans isomerase;protein_id=NP_625913.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1752279	1752563	.	-	.	ID=id2117;Dbxref=GeneID:1097069;Note=Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerases%2C score 174.90%2C E-value 4.2e-54;gbkey=misc_feature;gene=fkbP
NC_003888.3	RefSeq	sequence_feature	1752342	1752428	.	-	.	ID=id2118;Dbxref=GeneID:1097069;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2;gbkey=misc_feature;gene=fkbP
NC_003888.3	RefSeq	sequence_feature	1752474	1752524	.	-	.	ID=id2119;Dbxref=GeneID:1097069;Note=PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1;gbkey=misc_feature;gene=fkbP
NC_003888.3	RefSeq	ribosome_entry_site	1752650	1752654	.	-	.	ID=id2120;gbkey=RBS
NC_003888.3	RefSeq	gene	1752701	1753708	.	-	.	ID=gene1635;Dbxref=GeneID:1097070;Name=SCI41.22c;gbkey=Gene;gene=SCI41.22c;gene_biotype=protein_coding;gene_synonym=SCI41.22c;locus_tag=SCO1639
NC_003888.3	RefSeq	CDS	1752701	1753708	.	-	0	ID=cds1604;Parent=gene1635;Dbxref=Genbank:NP_625914.1,GeneID:1097070;Name=NP_625914.1;Note=SCI41.22c%2C probable  peptidyl-prolyl cis-trans isomerase%2C len: 335 aa. Similar to TR:Q53919 (EMBL:Z34523) Streptomyces chrysomallus FkbB%2C 312 aa%3B fasta scores: opt: 984 z-score: 1016.1 E():0%3B 49.1%25 identity in 336 aa overlap. Contains two Pfam matches to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerases and two Prosite matches to entry PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2 and also PS00013 prokaryotic membrane lipoprotein lipid attachment site in the correct position. C-terminal contains similarities with Streptomyces coelicolor StI41.21c%2C (244 aa)%3B fasta scores: opt: 134 z-score: 133.2 E():0.04%3B 31.1%25 identity in 177 aa overlap;gbkey=CDS;gene=SCI41.22c;product=peptidyl-prolyl cis-trans isomerase;protein_id=NP_625914.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1752713	1752994	.	-	.	ID=id2121;Dbxref=GeneID:1097070;Note=Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerases%2C score 66.40%2C E-value 8.6e-20;gbkey=misc_feature;gene=SCI41.22c
NC_003888.3	RefSeq	sequence_feature	1752779	1752865	.	-	.	ID=id2122;Dbxref=GeneID:1097070;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2;gbkey=misc_feature;gene=SCI41.22c
NC_003888.3	RefSeq	sequence_feature	1753154	1753441	.	-	.	ID=id2123;Dbxref=GeneID:1097070;Note=Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerases%2C score 42.60%2C E-value 2.8e-12;gbkey=misc_feature;gene=SCI41.22c
NC_003888.3	RefSeq	sequence_feature	1753220	1753306	.	-	.	ID=id2124;Dbxref=GeneID:1097070;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2;gbkey=misc_feature;gene=SCI41.22c
NC_003888.3	RefSeq	sequence_feature	1753649	1753681	.	-	.	ID=id2125;Dbxref=GeneID:1097070;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCI41.22c
NC_003888.3	RefSeq	ribosome_entry_site	1753717	1753720	.	-	.	ID=id2126;gbkey=RBS
NC_003888.3	RefSeq	gene	1753890	1755251	.	-	.	ID=gene1636;Dbxref=GeneID:1097071;Name=SCI41.23c;gbkey=Gene;gene=SCI41.23c;gene_biotype=protein_coding;gene_synonym=SCI41.23c;locus_tag=SCO1640
NC_003888.3	RefSeq	CDS	1753890	1755251	.	-	0	ID=cds1605;Parent=gene1636;Dbxref=Genbank:NP_625915.1,GeneID:1097071;Name=NP_625915.1;Note=SCI41.23c%2C unknown%2C len: 453 aa. Highly similar to Mycobacterium tuberculosis SW:YY37_MYCTU (EMBL:Z73966) hypothetical 51.4 kd protein CY49.37c%2C 452 aa%3B fasta scores: opt: 2309 z-score: 2768.8 E():0%3B 73.5%25 identity in 453 aa overlap. Contains also similarities with Streptomyces coelicolor StI41.30c%2C (497 aa)%3B fasta scores: opt: 962 z-score: 1024.1 E():0%3B 41.9%25 identity in 413 aa overlap.;gbkey=CDS;gene=SCI41.23c;product=hypothetical protein;protein_id=NP_625915.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1755155	1765765	.	-	.	ID=id2127;Note=99%25 identical to EMBL:AF086832 Streptomyces coelicolor ferredoxin%2C ARC (arc)%2C 20S proteasome beta-subunit precursor (prcB)%2C 20S proteasome alpha-subunit (prcA)%2C LacI family repressor%2C and transporter genes%2C complete cds%3B and unknown genes.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1755261	1756478	.	-	.	ID=gene1637;Dbxref=GeneID:1097072;Name=SCI41.24c;gbkey=Gene;gene=SCI41.24c;gene_biotype=protein_coding;gene_synonym=SCI41.24c;locus_tag=SCO1641
NC_003888.3	RefSeq	CDS	1755261	1756478	.	-	0	ID=cds1606;Parent=gene1637;Dbxref=Genbank:NP_625916.1,GeneID:1097072;Name=NP_625916.1;Note=SCI41.24c%2C probable transport protein%2C len: 405 aa%3B identical to TR:O87601 (EMBL:AF086832) S. coelicolor transporter (419 aa)%2C and similar to e.g. TR:O30996 (EMBL:AF024666) Corynebacterium striatum R-plasmid pTP10 chloramphenicol export protein (391 aa)%2C fasta scores%3B opt: 194 z-score: 210.6 E(): 0.00023%2C 25.9%25 identity in 394 aa overlap;gbkey=CDS;gene=SCI41.24c;product=transporter;protein_id=NP_625916.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1755372	1755404	.	-	.	ID=id2128;Dbxref=GeneID:1097072;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCI41.24c
NC_003888.3	RefSeq	ribosome_entry_site	1756485	1756488	.	-	.	ID=id2129;gbkey=RBS
NC_003888.3	RefSeq	gene	1756582	1757634	.	+	.	ID=gene1638;Dbxref=GeneID:1097073;Name=SCI41.25;gbkey=Gene;gene=SCI41.25;gene_biotype=protein_coding;gene_synonym=SCI41.25;locus_tag=SCO1642
NC_003888.3	RefSeq	CDS	1756582	1757634	.	+	0	ID=cds1607;Parent=gene1638;Dbxref=Genbank:NP_625917.1,GeneID:1097073;Name=NP_625917.1;Note=SCI41.25%2C LacI family regulator%2C len 336 aa. Identical to TR:O87600 (EMBL:AF086832) Streptomyces coelicolor ORF4 and similar to TR:AAD36030 (EMBL:AE001758) Thermotoga maritima TM0949 transcriptional regulator%2C LacI family%2C 332 aa%3B fasta scores: opt: 476 z-score: 517.4 E(): 1.9e-21%3B 29.5%25 identity in 339 aa overlap. Contains possible helix-turn-helix motif at aa 23-44.(Score 1430%2C +4.06 SD);gbkey=CDS;gene=SCI41.25;product=LacI family regulator;protein_id=NP_625917.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1756819	1757535	.	+	.	ID=id2130;Dbxref=GeneID:1097073;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 52.40%2C E-value 9.7e-12;gbkey=misc_feature;gene=SCI41.25
NC_003888.3	RefSeq	gene	1757649	1758413	.	-	.	ID=gene1639;Dbxref=GeneID:1097074;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;gene_synonym=pcrA,SCI41.26;locus_tag=SCO1643
NC_003888.3	RefSeq	CDS	1757649	1758413	.	-	0	ID=cds1608;Parent=gene1639;Dbxref=Genbank:NP_625918.1,GeneID:1097074;Name=NP_625918.1;Note=SCI41.26%2C pcrA 20S proteasome alpha-subunit%2C len: 254 aa. Identical to TR:O87599 (EMBL:AF086832) Streptomyces coelicolor 20S proteasome alpha-subunit%2C 254 aa and similar to TR:Q53080 (EMBL:U26421) Rhodococcus sp. proteasome alpha-type subunit 1%2C 259 aa%3B fasta scores: opt: 831 z-score: 982.8 E():0%3B 53.4%25 identity in 253 aa overlap.;gbkey=CDS;gene=pcrA;product=20S proteasome alpha-subunit;protein_id=NP_625918.1;transl_table=11
NC_003888.3	RefSeq	gene	1758475	1759320	.	-	.	ID=gene1640;Dbxref=GeneID:1097075;Name=prcB;gbkey=Gene;gene=prcB;gene_biotype=protein_coding;gene_synonym=prcB,SCI41.27;locus_tag=SCO1644
NC_003888.3	RefSeq	CDS	1758475	1759320	.	-	0	ID=cds1609;Parent=gene1640;Dbxref=Genbank:NP_625919.1,GeneID:1097075;Name=NP_625919.1;Note=SCI41.27%2C pcrB 20S proteasome beta-subunit precursor%2C len: 281 aa. Identical to TR:O87598 (EMBL%3B AF086832) Streptomyces coelicolor 20S proteasome beta-subunit precursor 281 aa and similar to TR:Q53083 (EMBL%3B U26422) Rhodococcus sp. proteasome beta-type subunit 2%2C 292 aa%3B fasta socres: opt: 952 z-score: 1081.0 E():0%3B 56.7%25 identity in 277 aa overlap.;gbkey=CDS;gene=prcB;product=20S proteasome subunit beta;protein_id=NP_625919.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1758712	1759158	.	-	.	ID=id2131;Dbxref=GeneID:1097075;Note=Pfam match to entry PF00227 proteasome%2C Proteasome A-type and B-type%2C score 67.90%2C E-value 2.3e-17;gbkey=misc_feature;gene=prcB
NC_003888.3	RefSeq	gene	1759272	1759865	.	-	.	ID=gene1641;Dbxref=GeneID:1097076;Name=SCI41.28c;gbkey=Gene;gene=SCI41.28c;gene_biotype=protein_coding;gene_synonym=SCI41.28c;locus_tag=SCO1645
NC_003888.3	RefSeq	CDS	1759272	1759865	.	-	0	ID=cds1610;Parent=gene1641;Dbxref=Genbank:NP_625920.1,GeneID:1097076;Name=NP_625920.1;Note=SCI41.28c%2C hypothetical protein%2C len: 197 aa. Identical to TR:O87597 (EMBL:AF086832) Streptomyces coelicolor hypothetical 18.6 kD protein and similar to SW:VG59_BPMD2 (EMBL:AF022214) Mycobacteriophage D29 gene 59 protein%2C 153 aa%3B fasta scores: opt: 175 z-score: 225.0 E(): 3.7e-05%3B 35.2%25 identity in 122 aa overlap;gbkey=CDS;gene=SCI41.28c;product=hypothetical protein;protein_id=NP_625920.1;transl_table=11
NC_003888.3	RefSeq	gene	1759899	1760117	.	-	.	ID=gene1642;Dbxref=GeneID:1097077;Name=SCI41.29c;gbkey=Gene;gene=SCI41.29c;gene_biotype=protein_coding;gene_synonym=SCI41.29c;locus_tag=SCO1646
NC_003888.3	RefSeq	CDS	1759899	1760117	.	-	0	ID=cds1611;Parent=gene1642;Dbxref=Genbank:NP_625921.1,GeneID:1097077;Name=NP_625921.1;Note=SCI41.29c%2C hypothetical protein%2C len: 72 aa. Identical to TR:O87596 (EMBL:AF086832) Streptomyces coelicolor hypothetical 8.0 Kd protein%2C len: 72 aa and similar to TR:Q53082 (EMBL:U26422) Rhodococcus sp. similar to Rhodococcus sp. NI86/21%2C 64 aa%3B fasta scores: opt: 197 z-score: 237.9 E(): 7e-06%3B 51.4%25 identity in 70 aa overlap. Contains probable coiled-coil from 10 to 61 (52 residues%2C max score: 1.620%2C probability 1.00);gbkey=CDS;gene=SCI41.29c;product=hypothetical protein;protein_id=NP_625921.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1760121	1760124	.	-	.	ID=id2132;gbkey=RBS
NC_003888.3	RefSeq	gene	1760296	1761789	.	-	.	ID=gene1643;Dbxref=GeneID:1097078;Name=SCI41.30c;gbkey=Gene;gene=SCI41.30c;gene_biotype=protein_coding;gene_synonym=SCI41.30c;locus_tag=SCO1647
NC_003888.3	RefSeq	CDS	1760296	1761789	.	-	0	ID=cds1612;Parent=gene1643;Dbxref=Genbank:NP_625922.1,GeneID:1097078;Name=NP_625922.1;Note=SCI41.30c%2C hypothetical protein%2C len: 497 aa. Identical to TR:O87595 (EMBL:AF086832) Streptomyces coelicolor hypothetical 65.1 Kd protein%2C len: 497 aa and similar to TR:Q53081 (EMBL:U26422) Rhodococcus sp. similar to ORF6(1) of Rhodococcus sp. NI86/21%2C 499 aa%3B fasta scores: opt: 2019 z-score: 2370.6 E():0%3B 62.5%25 identity in 493 aa overlap. Contains also similarities with Streptomyces coelicolor StI41.23c%2C 453 aa%3B fasta scores: opt: 962 z-score: 1019.2 E():0%3B 41.9%25 identity in 413 aa overlap;gbkey=CDS;gene=SCI41.30c;product=hypothetical protein;protein_id=NP_625922.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1761813	1761818	.	-	.	ID=id2133;gbkey=RBS
NC_003888.3	RefSeq	gene	1762040	1763806	.	-	.	ID=gene1644;Dbxref=GeneID:1097079;Name=arc;gbkey=Gene;gene=arc;gene_biotype=protein_coding;gene_synonym=arc,SCI41.31c;locus_tag=SCO1648
NC_003888.3	RefSeq	CDS	1762040	1763806	.	-	0	ID=cds1613;Parent=gene1644;Dbxref=Genbank:NP_625923.1,GeneID:1097079;Name=NP_625923.1;Note=SCI41.31c%2C arc AAA ATPase%2C len: 588 aa. Identical to TR:O87594 (EMBL:AF086832) Streptomyces coelicolor ARC%2C AAA ATPase forming ring-shaped complexes and similar to TR:O50202 (EMBL:AF088800) Rhodococcus erythropolis ARC protein%2C 591 aa%3B fasta scores: opt: 2036 z-score: 2155.8 E():0%3B 67.1%25 identity in 587 aa overlap. Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA). Contains probable coiled-coil from 47 to 93 (47 residues%2C max score: 1.592%2C probability 0.99);gbkey=CDS;gene=arc;product=ATPase AAA;protein_id=NP_625923.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1762409	1763005	.	-	.	ID=id2134;Dbxref=GeneID:1097079;Note=Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA)%2C score 230.10%2C E-value 3.1e-65;gbkey=misc_feature;gene=arc
NC_003888.3	RefSeq	sequence_feature	1762592	1762648	.	-	.	ID=id2135;Dbxref=GeneID:1097079;Note=PS00674 AAA-protein family signature;gbkey=misc_feature;gene=arc
NC_003888.3	RefSeq	sequence_feature	1762967	1762990	.	-	.	ID=id2136;Dbxref=GeneID:1097079;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=arc
NC_003888.3	RefSeq	ribosome_entry_site	1763815	1763820	.	-	.	ID=id2137;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1764045	1764049	.	+	.	ID=id2138;gbkey=RBS
NC_003888.3	RefSeq	gene	1764052	1764357	.	+	.	ID=gene1645;Dbxref=GeneID:1097080;Name=SCI41.32;gbkey=Gene;gene=SCI41.32;gene_biotype=protein_coding;gene_synonym=SCI41.32;locus_tag=SCO1649
NC_003888.3	RefSeq	CDS	1764052	1764357	.	+	0	ID=cds1614;Parent=gene1645;Dbxref=Genbank:NP_625924.1,GeneID:1097080;Name=NP_625924.1;Note=SCI41.32%2C ferredoxin%2C len: 101 aa. Identical to TR:087593 (EMBL:AF086832) Streptomyces coelicolor ferredoxin%2C len: 101 aa and similar to SW:FER_BACST (SW:P00212) Bacillus stearothermophilus ferredoxin%2C fasta scores: opt: 153 z-score: 211.3 E(): 0.00021%3B 33.3%25 identity in 69 aa overlap;gbkey=CDS;gene=SCI41.32;product=ferredoxin;protein_id=NP_625924.1;transl_table=11
NC_003888.3	RefSeq	gene	1764432	1765022	.	-	.	ID=gene1646;Dbxref=GeneID:1097081;Name=SCI41.33c;gbkey=Gene;gene=SCI41.33c;gene_biotype=protein_coding;gene_synonym=SCI41.33c;locus_tag=SCO1650
NC_003888.3	RefSeq	CDS	1764432	1765022	.	-	0	ID=cds1615;Parent=gene1646;Dbxref=Genbank:NP_625925.1,GeneID:1097081;Name=NP_625925.1;Note=SCI41.33c%2C hypothetical protein%2C len: 196 aa. Identical to TR:087592 (EMBL:AF086832) Streptomyces coelicolor hypothetical 20.2 Kd protein%2C len: 196 aa and low similarities to TR:CAA21729 (EMBL%3B AL032656) Caenorhabditis elegans Y106G6E.2 protein%2C 238 aa%3B fasta scores: opt: 120 z-score: 136.2 E():3.2%3B 29.3%25 identity in 116 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI41.33c;product=hypothetical protein;protein_id=NP_625925.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1765032	1765036	.	-	.	ID=id2139;gbkey=RBS
NC_003888.3	RefSeq	gene	1765257	1766159	.	-	.	ID=gene1647;Dbxref=GeneID:1097082;Name=SCI41.34c;gbkey=Gene;gene=SCI41.34c;gene_biotype=protein_coding;gene_synonym=SCI41.34c;locus_tag=SCO1651
NC_003888.3	RefSeq	CDS	1765257	1766159	.	-	0	ID=cds1616;Parent=gene1647;Dbxref=Genbank:NP_625926.1,GeneID:1097082;Name=NP_625926.1;Note=SCI41.34c%2C hypothetical protein%2C len: 300 aa. N-terminal identical to previously sequenced TR:O87591 (EMBL:AF086832) Streptomyces coelicolor hypothetical 18.8 kd protein (fragment) (168 aa)%3B fasta scores: opt: 1179 z-score: 1395.1 E(): 0%3B 100.0%25 identity in 168 aa overlap and similar to various hypothetical proteins%2C e.g. TR:Q9ZG14 (EMBL:AF088800) Rhodococcus erythropolis hypothetical 35.2 Kd protein%2C 324 aa%3B fasta scores: opt: 1134 z-score: 1338.1 E():0%3B 59.9%25 identity in 279 aa overlap;gbkey=CDS;gene=SCI41.34c;product=hypothetical protein;protein_id=NP_625926.1;transl_table=11
NC_003888.3	RefSeq	gene	1766287	1767411	.	-	.	ID=gene1648;Dbxref=GeneID:1097083;Name=SCI41.35c;gbkey=Gene;gene=SCI41.35c;gene_biotype=protein_coding;gene_synonym=SCI41.35c;locus_tag=SCO1652
NC_003888.3	RefSeq	CDS	1766287	1767411	.	-	0	ID=cds1617;Parent=gene1648;Dbxref=Genbank:NP_625927.1,GeneID:1097083;Name=NP_625927.1;Note=SCI41.35c%2C hypothetical protein%2C len: 374 aa%3B similar to various hypothetical proteins%2C e.g. SW:Y528_SYNY3 (EMBL:D64006) Synechocystis sp. (strain PCC 6803) hypothetical 40.5 KD protein SLL0528%2C 379 aa%3B fasta scores: opt: 547 z-score: 618.5 E(): 4.5e-27%3B 32.6%25 identity in 374 aa overlap. Contains two Pfam matches to entry PF00571 CBS%2C CBS domain%2C and a prosite match to entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=CDS;gene=SCI41.35c;product=hypothetical protein;protein_id=NP_625927.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1766311	1766472	.	-	.	ID=id2140;Dbxref=GeneID:1097083;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 18.80%2C E-value 0.13;gbkey=misc_feature;gene=SCI41.35c
NC_003888.3	RefSeq	sequence_feature	1766506	1766667	.	-	.	ID=id2141;Dbxref=GeneID:1097083;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 12.60%2C E-value 0.99;gbkey=misc_feature;gene=SCI41.35c
NC_003888.3	RefSeq	sequence_feature	1767217	1767246	.	-	.	ID=id2142;Dbxref=GeneID:1097083;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SCI41.35c
NC_003888.3	RefSeq	gene	1768285	1769139	.	+	.	ID=gene1649;Dbxref=GeneID:1097084;Name=SCI41.36;gbkey=Gene;gene=SCI41.36;gene_biotype=protein_coding;gene_synonym=SCI41.36;locus_tag=SCO1653
NC_003888.3	RefSeq	CDS	1768285	1769139	.	+	0	ID=cds1618;Parent=gene1649;Dbxref=Genbank:NP_625928.1,GeneID:1097084;Name=NP_625928.1;Note=SCI41.36%2C hypothetical protein%2C len: 371aa. Similar to various hypothetical proteins%2C e.g. TR:Q9ZG15 (EMBL:AF088800) Rhodococcus erythropolis hypothetical 35.5 Kd protein (323 aa)%3B fasta scores: opt: 1017 z-score: 1034.8 E(): 0%3B 51.5%25 identity in 299 aa overlap.;gbkey=CDS;gene=SCI41.36;product=hypothetical protein;protein_id=NP_625928.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1769146	1769150	.	+	.	ID=id2143;gbkey=RBS
NC_003888.3	RefSeq	gene	1769156	1769827	.	+	.	ID=gene1650;Dbxref=GeneID:1097085;Name=SCI41.37;gbkey=Gene;gene=SCI41.37;gene_biotype=protein_coding;gene_synonym=SCI41.37;locus_tag=SCO1654
NC_003888.3	RefSeq	CDS	1769156	1769827	.	+	0	ID=cds1619;Parent=gene1650;Dbxref=Genbank:NP_625929.1,GeneID:1097085;Name=NP_625929.1;Note=SCI41.37%2C possible two-component response regulator%2C len: 223 aa. Highly similar to various two-component response regulator%2C e.g. TR:CAB40929 (EMBL:AL049630) Streptomyces coelicolor SCE126.07C two component response regulator%2C 224 aa%3B fasta scores: opt: 866 z-score: 1015.8 E():0%3B 63.5%25 identity in 222 aa overlap. Pfam match to entry PF00072 response_reg%2C response regulator receiver domain also PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Contains possible helix-turn-helix motif at aa 174-195. (Score 1000%2C +2.59 SD);gbkey=CDS;gene=SCI41.37;product=two-component response regulator;protein_id=NP_625929.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1769162	1769509	.	+	.	ID=id2144;Dbxref=GeneID:1097085;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 134.80%2C E-value 1.6e-36;gbkey=misc_feature;gene=SCI41.37
NC_003888.3	RefSeq	sequence_feature	1769618	1769815	.	+	.	ID=id2145;Dbxref=GeneID:1097085;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 97.90%2C E-value 2e-25;gbkey=misc_feature;gene=SCI41.37
NC_003888.3	RefSeq	sequence_feature	1769669	1769752	.	+	.	ID=id2146;Dbxref=GeneID:1097085;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCI41.37
NC_003888.3	RefSeq	gene	1769946	1771550	.	-	.	ID=gene1651;Dbxref=GeneID:1097086;Name=SCI41.38c;gbkey=Gene;gene=SCI41.38c;gene_biotype=protein_coding;gene_synonym=SCI41.38c;locus_tag=SCO1655
NC_003888.3	RefSeq	CDS	1769946	1771550	.	-	0	ID=cds1620;Parent=gene1651;Dbxref=Genbank:NP_625930.1,GeneID:1097086;Name=NP_625930.1;Note=SCI41.38c%2C probable lipoprotein oligopeptide binding protein%2C len: 534 aa. Similar to TR:O54107 (EMBL:AL021529) Streptomyces coelicolor SC10A5.16C periplasmic oligopeptide binding protein%2C 521 aa%3B fasta scores: opt: 1101 z-score: 1218.9 E(): 0%3B 36.0%25 identity in 528 aa overlap. Contains two Pfam matches to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SCI41.38c;product=lipoprotein oligopeptide binding protein;protein_id=NP_625930.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1769961	1770344	.	-	.	ID=id2147;Dbxref=GeneID:1097086;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 24.60%2C E-value 4.6e-06;gbkey=misc_feature;gene=SCI41.38c
NC_003888.3	RefSeq	sequence_feature	1770426	1771238	.	-	.	ID=id2148;Dbxref=GeneID:1097086;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 69.60%2C E-value 1.3e-18;gbkey=misc_feature;gene=SCI41.38c
NC_003888.3	RefSeq	sequence_feature	1771485	1771517	.	-	.	ID=id2149;Dbxref=GeneID:1097086;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCI41.38c
NC_003888.3	RefSeq	ribosome_entry_site	1771560	1771564	.	-	.	ID=id2150;gbkey=RBS
NC_003888.3	RefSeq	gene	1771994	1772695	.	-	.	ID=gene1652;Dbxref=GeneID:1097087;Name=SCI46.01c;gbkey=Gene;gene=SCI46.01c;gene_biotype=protein_coding;gene_synonym=SCI46.01c;locus_tag=SCO1656
NC_003888.3	RefSeq	CDS	1771994	1772695	.	-	0	ID=cds1621;Parent=gene1652;Dbxref=Genbank:NP_625931.1,GeneID:1097087;Name=NP_625931.1;Note=SCI46.01c%2C possible hydrolase%2C len: 233 aa%3B similar to TR:CAC13072 (EMBL:AL445503) Streptomyces coelicolor hydrolase 2SCG38.13%2C 238 aa%3B fasta scores: opt: 323 z-score: 377.6 E(): 1.7e-13%3B 36.6%25 identity in 191 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=SCI46.01c;product=hydrolase;protein_id=NP_625931.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1772090	1772644	.	-	.	ID=id2151;Dbxref=GeneID:1097087;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 127.10%2C E-value 3.2e-34;gbkey=misc_feature;gene=SCI46.01c
NC_003888.3	RefSeq	ribosome_entry_site	1772702	1772709	.	-	.	ID=id2152;gbkey=RBS
NC_003888.3	RefSeq	gene	1772821	1776333	.	-	.	ID=gene1653;Dbxref=GeneID:1097088;Name=SCI46.02c;gbkey=Gene;gene=SCI46.02c;gene_biotype=protein_coding;gene_synonym=SCI46.02c;locus_tag=SCO1657
NC_003888.3	RefSeq	CDS	1772821	1776333	.	-	0	ID=cds1622;Parent=gene1653;Dbxref=Genbank:NP_625932.1,GeneID:1097088;Name=NP_625932.1;Note=SCI46.02c%2C probable methionine synthase%2C len: 1170 aa%3B similar to SW:METH_ECOLI (EMBL:X16584) Escherichia coli 5-methyltetrahydrofolate-homocysteine methyltransferase (EC 2.1.1.13) (methionine synthase%2C vitamin-B12 dependent isozyme) MetH%2C 1226 aa%3B fasta scores: opt: 1593 z-score: 1749.1 E(): 0%3B 32.4%25 identity in 1215 aa overlap. Contains Pfam match to entry PF02310 B12-binding and match to Prosite entry PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=CDS;gene=SCI46.02c;product=methionine synthase;protein_id=NP_625932.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1773766	1774128	.	-	.	ID=id2153;Dbxref=GeneID:1097088;Note=Pfam match to entry PF02310 B12-binding%2C %2C score 158.70%2C E-value 9.7e-44;gbkey=misc_feature;gene=SCI46.02c
NC_003888.3	RefSeq	sequence_feature	1775896	1775928	.	-	.	ID=id2154;Dbxref=GeneID:1097088;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=SCI46.02c
NC_003888.3	RefSeq	ribosome_entry_site	1776341	1776344	.	-	.	ID=id2155;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	1776405	1777605	.	+	.	ID=id2156;Note=previously sequenced DNA fragment. EMBL:X14188 Streptomyces coelicolor gylR gene and gylABX operon promoter region;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	1776722	1776726	.	+	.	ID=id2157;gbkey=RBS
NC_003888.3	RefSeq	gene	1776737	1777501	.	+	.	ID=gene1654;Dbxref=GeneID:1097089;Name=gylR;gbkey=Gene;gene=gylR;gene_biotype=protein_coding;gene_synonym=gylR,SCI46.03;locus_tag=SCO1658
NC_003888.3	RefSeq	CDS	1776737	1777501	.	+	0	ID=cds1623;Parent=gene1654;Dbxref=Genbank:NP_625933.1,GeneID:1097089;Name=NP_625933.1;Note=SCI46.03%2C gylR%2C glycerol operon regulatory protein%2C len: 254 aa%3B identical to previously sequenced SW:GYLR_STRCO (EMBL:X14188) Streptomyces coelicolor glycerol operon regulatory protein GylR%2C 254 aa. Contains Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator and match to Prosite entry PS01051 Bacterial regulatory proteins%2C iclR family signature;gbkey=CDS;gene=gylR;product=glycerol operon regulatory protein;protein_id=NP_625933.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1776923	1777480	.	+	.	ID=id2158;Dbxref=GeneID:1097089;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 264.40%2C E-value 1.5e-75;gbkey=misc_feature;gene=gylR
NC_003888.3	RefSeq	sequence_feature	1777289	1777354	.	+	.	ID=id2159;Dbxref=GeneID:1097089;Note=PS01051 Bacterial regulatory proteins%2C iclR family signature;gbkey=misc_feature;gene=gylR
NC_003888.3	RefSeq	sequence_feature	1777486	1778079	.	+	.	ID=id2160;Note=previously sequenced DNA fragment. EMBL:X14188 Streptomyces coelicolor gylR gene and gylABX operon promoter region;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	1777827	1777833	.	+	.	ID=id2161;gbkey=RBS
NC_003888.3	RefSeq	gene	1777840	1778634	.	+	.	ID=gene1655;Dbxref=GeneID:1097090;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;gene_synonym=glpF,SCI52.01;locus_tag=SCO1659
NC_003888.3	RefSeq	CDS	1777840	1778634	.	+	0	ID=cds1624;Parent=gene1655;Dbxref=Genbank:NP_625934.1,GeneID:1097090;Name=NP_625934.1;Note=SCI52.01%2C glpF%2C probable glycerol uptake facilitator protein%2C len: 264 aa%3B N-terminal region identical to previously sequenced SW:GLPF_STRCO (EMBL:X14188) Streptomyces coelicolor probable glycerol uptake facilitator protein (fragment) GlpF or GylA%2C 80 aa%2C and similar to SW:GLPF_BACSU (EMBL:M99611) Bacillus subtilis glycerol uptake facilitator protein GlpF%2C 274 aa%3B fasta scores: opt: 520 Z-score: 611.2 bits: 120.8 E(): 1.8e-26%3B 51.163%25 identity in 258 aa overlap. Contains Pfam match to entry PF00230 MIP%2C Major intrinsic protein and match to Prosite entry PS00221 MIP family signature. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=glpF;product=glycerol uptake facilitator protein;protein_id=NP_625934.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1777858	1778616	.	+	.	ID=id2162;Dbxref=GeneID:1097090;Note=Pfam match to entry PF00230 MIP%2C Major intrinsic protein%2C score 175.90%2C E-value 1.5e-56;gbkey=misc_feature;gene=glpF
NC_003888.3	RefSeq	sequence_feature	1778032	1778058	.	+	.	ID=id2163;Dbxref=GeneID:1097090;Note=PS00221 MIP family signature;gbkey=misc_feature;gene=glpF
NC_003888.3	RefSeq	ribosome_entry_site	1778713	1778719	.	+	.	ID=id2164;gbkey=RBS
NC_003888.3	RefSeq	gene	1778726	1780264	.	+	.	ID=gene1656;Dbxref=GeneID:1097091;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;gene_synonym=glpK,SCI52.02;locus_tag=SCO1660
NC_003888.3	RefSeq	CDS	1778726	1780264	.	+	0	ID=cds1625;Parent=gene1656;Dbxref=Genbank:NP_625935.1,GeneID:1097091;Name=NP_625935.1;Note=SCI52.02%2C glpK%2C glycerol kinase%2C len: 512 aa%3B similar to SW:GLPK_ECOLI (EMBL:X15054) Escherichia coli glycerol kinase (EC 2.7.1.30) GlpK or B3926%2C 501 aa%3B fasta scores: opt: 1756 Z-score: 2090.6 bits: 396.4 E(): 7.3e-109%3B 52.259%25 identity in 509 aa overlap and to TR:Q9RJM2 (EMBL:AL121849) Streptomyces coelicolor glycerol kinase GlpK2 or SCF6.05%2C 508 aa%3B fasta scores: opt: 1974 Z-score: 2055.1 bits: 389.8 E(): 9.3e-109%3B 58.020%25 identity in 505 aa overlap. Contains Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases and match to Prosite entry PS00445 FGGY family of carbohydrate kinases signature 2;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=NP_625935.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1778984	1780090	.	+	.	ID=id2165;Dbxref=GeneID:1097091;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C score 455.40%2C E-value 4.8e-133;gbkey=misc_feature;gene=glpK
NC_003888.3	RefSeq	sequence_feature	1779842	1779904	.	+	.	ID=id2166;Dbxref=GeneID:1097091;Note=PS00445 FGGY family of carbohydrate kinases signature 2;gbkey=misc_feature;gene=glpK
NC_003888.3	RefSeq	gene	1780273	1781889	.	+	.	ID=gene1657;Dbxref=GeneID:1097092;Name=SCI52.03;gbkey=Gene;gene=SCI52.03;gene_biotype=protein_coding;gene_synonym=SCI52.03;locus_tag=SCO1661
NC_003888.3	RefSeq	CDS	1780273	1781889	.	+	0	ID=cds1626;Parent=gene1657;Dbxref=Genbank:NP_625936.1,GeneID:1097092;Name=NP_625936.1;Note=SCI52.03%2C probable glycerol-3-phosphate dehydrogenase%2C len: 538 aa%3B similar to SW:GLPD_BACSU (EMBL:M34393) Bacillus subtilis aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.99.5) GlpD%2C 555 aa%3B fasta scores: opt: 751 Z-score: 835.1 bits: 164.3 E(): 6.1e-39%3B 30.830%25 identity in 506 aa overlap. Contains Pfam match to entry PF01224 FAD_Gly3P_dh%2C FAD-dependent glycerol-3-phosphate dehydrogenase;gbkey=CDS;gene=SCI52.03;product=glycerol-3-phosphate dehydrogenase;protein_id=NP_625936.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1780372	1781880	.	+	.	ID=id2167;Dbxref=GeneID:1097092;Note=Pfam match to entry PF01224 FAD_Gly3P_dh%2C FAD-dependent glycerol-3-phosphate dehydrogenase%2C score 286.00%2C E-value 4.7e-82;gbkey=misc_feature;gene=SCI52.03
NC_003888.3	RefSeq	ribosome_entry_site	1782028	1782034	.	+	.	ID=id2168;gbkey=RBS
NC_003888.3	RefSeq	gene	1782041	1783042	.	+	.	ID=gene1658;Dbxref=GeneID:1097093;Name=SCI52.04;gbkey=Gene;gene=SCI52.04;gene_biotype=protein_coding;gene_synonym=SCI52.04;locus_tag=SCO1662
NC_003888.3	RefSeq	CDS	1782041	1783042	.	+	0	ID=cds1627;Parent=gene1658;Dbxref=Genbank:NP_625937.1,GeneID:1097093;Name=NP_625937.1;Note=SCI52.04%2C conserved hypothetical protein%2C len: 333 aa%3B similar to TR:O33260 (EMBL:Z97559) Mycobacterium tuberculosis hypothetical 31.8 kDa protein MTCY261.21%2C 292 aa%3B fasta scores: opt: 1072 Z-score: 902.2 bits: 175.1 E(): 1.1e-42%3B 57.554%25 identity in 278 aa overlap. Contains 3x degenerate repeat unit: PGG;gbkey=CDS;gene=SCI52.04;product=hypothetical protein;protein_id=NP_625937.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1782887	1782913	.	+	.	ID=id2169;Dbxref=GeneID:1097093;Note=3x degenerate repeat translated in SCI52.04;gbkey=repeat_region;gene=SCI52.04
NC_003888.3	RefSeq	stem_loop	1783045	1783088	.	+	.	ID=id2170;Note=possible stem loop. Score 53: 19/20 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1783107	1784336	.	-	.	ID=gene1659;Dbxref=GeneID:1097094;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;gene_synonym=SCI52.05c;locus_tag=SCO1663
NC_003888.3	RefSeq	CDS	1783107	1784336	.	-	0	ID=cds1628;Parent=gene1659;Dbxref=Genbank:NP_625938.1,GeneID:1097094;Name=NP_625938.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=NP_625938.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1783212	1784255	.	-	.	ID=id2171;Dbxref=GeneID:1097094;Note=Pfam match to entry PF01406 tRNA-synt_1e%2C tRNA synthetases class I (C)%2C score 287.00%2C E-value 2.3e-82;gbkey=misc_feature;gene=cysS
NC_003888.3	RefSeq	gene	1784440	1785237	.	-	.	ID=gene1660;Dbxref=GeneID:1097095;Name=SCI52.06c;gbkey=Gene;gene=SCI52.06c;gene_biotype=protein_coding;gene_synonym=SCI52.06c;locus_tag=SCO1664
NC_003888.3	RefSeq	CDS	1784440	1785237	.	-	0	ID=cds1629;Parent=gene1660;Dbxref=Genbank:NP_625939.1,GeneID:1097095;Name=NP_625939.1;Note=SCI52.06%2C conserved hypothetical protein%2C len: 265 aa%3B similar to TR:O06242 (EMBL:Z95388) Mycobacterium tuberculosis hypothetical 28.3 kDa protein MTCY270.35%2C 262 aa%3B fasta scores: opt: 495 Z-score: 595.6 bits: 117.9 E(): 1.4e-25%3B 50.951%25 identity in 263 aa overlap;gbkey=CDS;gene=SCI52.06c;product=hypothetical protein;protein_id=NP_625939.1;transl_table=11
NC_003888.3	RefSeq	gene	1785234	1785824	.	-	.	ID=gene1661;Dbxref=GeneID:1097096;Name=SCI52.07c;gbkey=Gene;gene=SCI52.07c;gene_biotype=protein_coding;gene_synonym=SCI52.07c;locus_tag=SCO1665
NC_003888.3	RefSeq	CDS	1785234	1785824	.	-	0	ID=cds1630;Parent=gene1661;Dbxref=Genbank:NP_625940.1,GeneID:1097096;Name=NP_625940.1;Note=SCI52.07c%2C conserved hypothetical protein%2C len: 196 aa%3B similar to TR:O06241 (EMBL:Z95388)Mycobacterium tuberculosis hypothetical 21.2 kDa protein MTCY270.34%2C 195 aa%3B fasta scores: opt: 409 Z-score: 445.1 bits: 89.2 E(): 3.3e-17%3B 54.639%25 identity in 194 aa overlap;gbkey=CDS;gene=SCI52.07c;product=hypothetical protein;protein_id=NP_625940.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1785832	1785835	.	-	.	ID=id2172;gbkey=RBS
NC_003888.3	RefSeq	gene	1785910	1786596	.	-	.	ID=gene1662;Dbxref=GeneID:1097097;Name=SCI52.08c;gbkey=Gene;gene=SCI52.08c;gene_biotype=protein_coding;gene_synonym=SCI52.08c;locus_tag=SCO1666
NC_003888.3	RefSeq	CDS	1785910	1786596	.	-	0	ID=cds1631;Parent=gene1662;Dbxref=Genbank:NP_625941.1,GeneID:1097097;Name=NP_625941.1;Note=SCI52.08c%2C possible phosphatase%2C len: 228 aa%3B similar to SW:COBC_ECOLI (EMBL:U23163) Escherichia coli alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.*) CobC or PhpB or B0638%2C aa%3B fasta scores: opt: 212 Z-score: 252.7 bits: 53.8 E(): 1.7e-06%3B 29.412%25 identity in 187 aa overlap and to TR:O06240 (EMBL:Z95388) Mycobacterium tuberculosis hypothetical 21.5 kDa protein MTCY270.33%2C 250 aa%3B fasta scores: opt: 725 Z-score: 836.0 bits: 162.0 E(): 5.5e-39%3B 51.923%25 identity in 208 aa overlap. Contains Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family;gbkey=CDS;gene=SCI52.08c;product=phosphatase;protein_id=NP_625941.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1786303	1786584	.	-	.	ID=id2173;Dbxref=GeneID:1097097;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 54.20%2C E-value 7.1e-14;gbkey=misc_feature;gene=SCI52.08c
NC_003888.3	RefSeq	ribosome_entry_site	1786640	1786643	.	+	.	ID=id2174;gbkey=RBS
NC_003888.3	RefSeq	gene	1786649	1787653	.	+	.	ID=gene1663;Dbxref=GeneID:1097098;Name=SCI52.09;gbkey=Gene;gene=SCI52.09;gene_biotype=protein_coding;gene_synonym=SCI52.09;locus_tag=SCO1667
NC_003888.3	RefSeq	CDS	1786649	1787653	.	+	0	ID=cds1632;Parent=gene1663;Dbxref=Genbank:NP_625942.1,GeneID:1097098;Name=NP_625942.1;Note=SCI52.09%2C possible ion transport protein%2C len: 334 aa%3B similar to SW:CORA_ECOLI (EMBL:L11042) Escherichia coli magnesium and cobalt transport protein CorA%2C 316 aa%3B fasta scores: opt: 281 Z-score: 338.8 bits: 71.0 E(): 2.7e-11%3B 25.418%25 identity in 299 aa overlap and to TR:Q9FBK1 (EMBL:AL390975) Streptomyces coelicolor metal-transport protein SCP8.20c%2C 371 aa%3B fasta scores: opt: 1166 Z-score: 1386.9 bits: 265.1 E(): 1.1e-69%3B 53.801%25 identity in 342 aa overlap. Contains Pfam match to entry PF01544 CorA%2C CorA-like Mg2+ transporter and possible hydrophobic membranes spanning regions in the C-terminal domain;gbkey=CDS;gene=SCI52.09;product=ion transport protein;protein_id=NP_625942.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1786739	1787650	.	+	.	ID=id2175;Dbxref=GeneID:1097098;Note=Pfam match to entry PF01544 CorA%2C CorA-like Mg2+ transporter%2C score 281.30%2C E-value 1.2e-80;gbkey=misc_feature;gene=SCI52.09
NC_003888.3	RefSeq	gene	1787668	1788456	.	-	.	ID=gene1664;Dbxref=GeneID:1097099;Name=SCI52.10c;gbkey=Gene;gene=SCI52.10c;gene_biotype=protein_coding;gene_synonym=SCI52.10c;locus_tag=SCO1668
NC_003888.3	RefSeq	CDS	1787668	1788456	.	-	0	ID=cds1633;Parent=gene1664;Dbxref=Genbank:NP_625943.1,GeneID:1097099;Name=NP_625943.1;Note=SCI52.10c%2C unknown%2C len: 262 aa;gbkey=CDS;gene=SCI52.10c;product=hypothetical protein;protein_id=NP_625943.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1788463	1788468	.	-	.	ID=id2176;gbkey=RBS
NC_003888.3	RefSeq	gene	1788693	1789748	.	-	.	ID=gene1665;Dbxref=GeneID:1097100;Name=SCI52.11c;gbkey=Gene;gene=SCI52.11c;gene_biotype=protein_coding;gene_synonym=SCI52.11c;locus_tag=SCO1669
NC_003888.3	RefSeq	CDS	1788693	1789748	.	-	0	ID=cds1634;Parent=gene1665;Dbxref=Genbank:NP_625944.1,GeneID:1097100;Name=NP_625944.1;Note=SCI52.11c%2C possible ATP/GTP-binding protein%2C len: 351 aa%3B similar to TR:O53565 (EMBL:AL022022) Mycobacterium tuberculosis hypothetical 37.6 kDa protein MTV023.27c%2C 347 aa%3B fasta scores: opt: 859 Z-score: 986.1 bits: 190.9 E(): 2.4e-47%3B 41.449%25 identity in 345 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI52.11c;product=ATP/GTP-binding protein;protein_id=NP_625944.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1789113	1789136	.	-	.	ID=id2177;Dbxref=GeneID:1097100;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI52.11c
NC_003888.3	RefSeq	gene	1789862	1790848	.	+	.	ID=gene1666;Dbxref=GeneID:1097101;Name=SCI52.12;gbkey=Gene;gene=SCI52.12;gene_biotype=protein_coding;gene_synonym=SCI52.12;locus_tag=SCO1670
NC_003888.3	RefSeq	CDS	1789862	1790848	.	+	0	ID=cds1635;Parent=gene1666;Dbxref=Genbank:NP_625945.1,GeneID:1097101;Name=NP_625945.1;Note=SCI52.12%2C possible oxidoreductase%2C len: 328 aa%3B similar to TR:Q44328 (EMBL:AF242881) Agrobacterium radiobacter MocA protein%2C 354 aa%3B fasta scores: opt: 708 Z-score: 822.0 bits: 160.5 E(): 3.3e-38%3B 41.246%25 identity in 337 aa overlap;gbkey=CDS;gene=SCI52.12;product=oxidoreductase;protein_id=NP_625945.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1790835	1790838	.	+	.	ID=id2178;Dbxref=GeneID:1097101;gbkey=RBS;gene=SCI52.12
NC_003888.3	RefSeq	gene	1790845	1793163	.	+	.	ID=gene1667;Dbxref=GeneID:1097102;Name=SCI52.13;gbkey=Gene;gene=SCI52.13;gene_biotype=protein_coding;gene_synonym=SCI52.13;locus_tag=SCO1671
NC_003888.3	RefSeq	CDS	1790845	1793163	.	+	0	ID=cds1636;Parent=gene1667;Dbxref=Genbank:NP_625946.1,GeneID:1097102;Name=NP_625946.1;Note=SCI52.13%2C hypothetical protein%2C len: 772 aa%3B N-terminal region (first 89 aa) similar to N-terminal region of TR:O05479 (EMBL:M86351) Streptomyces sp. hypothetical protein 481 aa and rest of the CDS similar to C-terminal region of TR:Q9RT63 (EMBL:AE002029) Deinococcus radiodurans exodeoxyribonuclease V%2C subunit RecD%2C DR1902%2C 715 aa%3B fasta scores: opt: 298 Z-score: 242.2 bits: 55.5 E(): 6.5e-06%3B 31.023%25 identity in 577 aa overlap;gbkey=CDS;gene=SCI52.13;product=hypothetical protein;protein_id=NP_625946.1;transl_table=11
NC_003888.3	RefSeq	gene	1793226	1794029	.	-	.	ID=gene1668;Dbxref=GeneID:1097103;Name=SCI52.14c;gbkey=Gene;gene=SCI52.14c;gene_biotype=protein_coding;gene_synonym=SCI52.14c;locus_tag=SCO1672
NC_003888.3	RefSeq	CDS	1793226	1794029	.	-	0	ID=cds1637;Parent=gene1668;Dbxref=Genbank:NP_625947.1,GeneID:1097103;Name=NP_625947.1;Note=SCI52.14c%2C unknown%2C len: 267 aa. Contains 6x degenerate repeat unit:(T/G)(D/E)LD;gbkey=CDS;gene=SCI52.14c;product=hypothetical protein;protein_id=NP_625947.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1793271	1793342	.	-	.	ID=id2179;Dbxref=GeneID:1097103;Note=6x degenerate repeat unit translated in SCI52.14c;gbkey=repeat_region;gene=SCI52.14c
NC_003888.3	RefSeq	gene	1794077	1794265	.	+	.	ID=gene1669;Dbxref=GeneID:1097104;Name=SCI52.15;gbkey=Gene;gene=SCI52.15;gene_biotype=protein_coding;gene_synonym=SCI52.15;locus_tag=SCO1673
NC_003888.3	RefSeq	CDS	1794077	1794265	.	+	0	ID=cds1638;Parent=gene1669;Dbxref=Genbank:NP_625948.1,GeneID:1097104;Name=NP_625948.1;Note=SCI52.15%2C hypothetical protein%2C len: 62 aa%3B low similarity to TR:Q9CC44 (EMBL:AL583921) Mycobacterium leprae hypothetical protein ML1294%2C 84 aa%3B fasta scores: opt: 139 Z-score: 215.3 bits: 43.8 E(): 0.0002%3B 44.000%25 identity in 50 aa overlap;gbkey=CDS;gene=SCI52.15;product=hypothetical protein;protein_id=NP_625948.1;transl_table=11
NC_003888.3	RefSeq	gene	1794330	1795109	.	-	.	ID=gene1670;Dbxref=GeneID:1097105;Name=SCI52.16c;gbkey=Gene;gene=SCI52.16c;gene_biotype=protein_coding;gene_synonym=SCI52.16c;locus_tag=SCO1674
NC_003888.3	RefSeq	CDS	1794330	1795109	.	-	0	ID=cds1639;Parent=gene1670;Dbxref=Genbank:NP_625949.1,GeneID:1097105;Name=NP_625949.1;Note=SCI52.16c%2C possible hypothetical protein%2C len: 259 aa%3B similar to TR:Q9X7U2 (EMBL:AL049863) Streptomyces coelicolor hypothetical 22.7 kDa protein SC5H1.35c%2C 237 aa%3B fasta scores: opt: 566 Z-score: 369.4 bits: 75.8 E(): 5.3e-13%3B 46.154%25 identity in 260 aa overlap. High content in glycine amino acid residues. Also contains the following repeats: 2x(SPGV-SGN-V--P--VPVNVCGN--DVVG-LNP--GN-C-N-GGG) and 4x(GG-) and a possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI52.16c;product=hypothetical protein;protein_id=NP_625949.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1794621	1794755	.	-	.	ID=id2180;Dbxref=GeneID:1097105;Note=translated in SCI52.16c;gbkey=repeat_region;gene=SCI52.16c
NC_003888.3	RefSeq	repeat_region	1794819	1794854	.	-	.	ID=id2181;Dbxref=GeneID:1097105;Note=4x degenerate repeat unit translated in SCI52.16c;gbkey=repeat_region;gene=SCI52.16c
NC_003888.3	RefSeq	repeat_region	1794861	1794995	.	-	.	ID=id2182;Dbxref=GeneID:1097105;Note=translated in SCI52.16c;gbkey=repeat_region;gene=SCI52.16c
NC_003888.3	RefSeq	gene	1795289	1795522	.	-	.	ID=gene1671;Dbxref=GeneID:1097106;Name=SCI52.17c;gbkey=Gene;gene=SCI52.17c;gene_biotype=protein_coding;gene_synonym=SCI52.17c;locus_tag=SCO1675
NC_003888.3	RefSeq	CDS	1795289	1795522	.	-	0	ID=cds1640;Parent=gene1671;Dbxref=Genbank:NP_625950.1,GeneID:1097106;Name=NP_625950.1;Note=SCI52.17c%2C possible small membrane protein%2C len: 77 aa%3B similar to TR:Q9KYH3 (EMBL:AL356595) Streptomyces coelicolor small hypothetical protein SCC61A.20%2C 91 aa%3B fasta scores: opt: 366 Z-score: 390.2 bits: 76.6 E(): 5.1e-16%3B 73.333%25 identity in 75 aa overlap and to TR:Q9L1J9 (EMBL:AL139164) Streptomyces coelicolor small hypothetical protein SCC46.02c%2C 75 aa%3B fasta scores: opt: 323 Z-score: 394.8 bits: 77.1 E(): 2.1e-14%3B 68.493%25 identity in 73 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI52.17c;product=small membrane protein;protein_id=NP_625950.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1795527	1795532	.	-	.	ID=id2183;gbkey=RBS
NC_003888.3	RefSeq	gene	1795655	1796992	.	-	.	ID=gene1672;Dbxref=GeneID:1097107;Name=SCI52.18c;gbkey=Gene;gene=SCI52.18c;gene_biotype=protein_coding;gene_synonym=SCI52.18c;locus_tag=SCO1676
NC_003888.3	RefSeq	CDS	1795655	1796992	.	-	0	ID=cds1641;Parent=gene1672;Dbxref=Genbank:NP_625951.1,GeneID:1097107;Name=NP_625951.1;Note=SCI52.18c%2C possible peptidase%2C len: 445 aa%3B similar to TR:Q9CC46 (EMBL:AL583921) Mycobacterium leprae possible peptidase ML1288%2C 467 aa%3B fasta scores: opt: 1595 Z-score: 1853.9 bits: 352.3 E(): 1.1e-95%3B 54.788%25 identity in 449 aa overlap%2C to SW:ACY1_PIG (EMBL:D13514) Sus scrofa aminoacylase-1 (EC 3.5.1.14) Acy1%2C 406 aa%3B fasta scores: opt: 368 Z-score: 430.7 bits: 88.7 E(): 2.1e-16%3B 27.563%25 identity in 439 aa overlap and to TR:Q9ZBI7 (EMBL:AL035161) Streptomyces coelicolor aminoacylase SC9C7.23%2C 444 aa%3B fasta scores: opt: 1543 Z-score: 1530.3 bits: 292.3 E(): 1.6e-79%3B 54.795%25 identity in 438 aa overlap. Contains Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40 and match to Prosite entry PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1;gbkey=CDS;gene=SCI52.18c;product=hypothetical protein;protein_id=NP_625951.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1795823	1796923	.	-	.	ID=id2184;Dbxref=GeneID:1097107;Note=Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40%2C score 209.50%2C E-value 3.8e-59;gbkey=misc_feature;gene=SCI52.18c
NC_003888.3	RefSeq	sequence_feature	1796705	1796734	.	-	.	ID=id2185;Dbxref=GeneID:1097107;Note=PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1;gbkey=misc_feature;gene=SCI52.18c
NC_003888.3	RefSeq	ribosome_entry_site	1796998	1797003	.	-	.	ID=id2186;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	1797034	1797368	.	+	.	ID=id2187;Note=previously sequenced DNA fragment. EMBL:U59627 Streptomyces coelicolor tRNA-Leu gene%2C complete sequence.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	1797166	1797253	.	+	.	ID=gene1673;Dbxref=GeneID:3240008;Name=SCOt08;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt08
NC_003888.3	RefSeq	tRNA	1797166	1797253	.	+	.	ID=rna10;Parent=gene1673;Dbxref=GeneID:3240008;Note=tRNA Leu anticodon GAG%2C Cove score 65.31;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	exon	1797166	1797253	.	+	.	ID=id2188;Parent=rna10;Dbxref=GeneID:3240008;Note=tRNA Leu anticodon GAG%2C Cove score 65.31;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	gene	1797321	1797695	.	+	.	ID=gene1674;Dbxref=GeneID:1097108;Name=SCI52.19;gbkey=Gene;gene=SCI52.19;gene_biotype=protein_coding;gene_synonym=SCI52.19;locus_tag=SCO1677
NC_003888.3	RefSeq	CDS	1797321	1797695	.	+	0	ID=cds1642;Parent=gene1674;Dbxref=Genbank:NP_625952.1,GeneID:1097108;Name=NP_625952.1;Note=SCI52.19%2C conserved hypothetical protein%2C len: 124 aa%3B similar to TR:BAB35158 (EMBL:AP002556) Escherichia coli O157:H7 hypothetical 17.0 kDa protein ECS1735%2C 152 aa%3B fasta scores: opt: 397 Z-score: 489.0 bits: 96.3 E(): 1.2e-19%3B 52.033%25 identity in 123 aa overlap;gbkey=CDS;gene=SCI52.19;product=hypothetical protein;protein_id=NP_625952.1;transl_table=11
NC_003888.3	RefSeq	gene	1797723	1798424	.	-	.	ID=gene1675;Dbxref=GeneID:1097109;Name=SCI52.20c;gbkey=Gene;gene=SCI52.20c;gene_biotype=protein_coding;gene_synonym=SCI52.20c;locus_tag=SCO1678
NC_003888.3	RefSeq	CDS	1797723	1798424	.	-	0	ID=cds1643;Parent=gene1675;Dbxref=Genbank:NP_625953.1,GeneID:1097109;Name=NP_625953.1;Note=SCI52.20c%2C probable transcriptional regulator%2C len: 233 aa%3B similar to TR:O50536 (EMBL:AJ003022) Streptomyces coelicolor sporulation transcriptional factor WhiH%2C 295 aa%3B fasta scores: opt: 432 Z-score: 525.2 E(): 1.1e-21%3B 34.404%25 identity in 218 aa overlap and to SW:DGOR_ECOLI (EMBL:L10328) Escherichia coli galactonate operon transcriptional repressor DgoR or B3694/B3695%2C 229 aa%3B fasta scores: opt: 320 Z-score: 393.0 E(): 2.6e-14%3B 29.808%25 identity in 208 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and possible helix-turn-helix motif at residues 31..52 (+3.18 SD);gbkey=CDS;gene=SCI52.20c;product=transcriptional regulator;protein_id=NP_625953.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1798215	1798322	.	-	.	ID=id2189;Dbxref=GeneID:1097109;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 26.60%2C E-value 1.2e-06;gbkey=misc_feature;gene=SCI52.20c
NC_003888.3	RefSeq	gene	1798561	1799088	.	+	.	ID=gene1676;Dbxref=GeneID:1097110;Name=SCI52.21;gbkey=Gene;gene=SCI52.21;gene_biotype=protein_coding;gene_synonym=SCI52.21;locus_tag=SCO1679
NC_003888.3	RefSeq	CDS	1798561	1799088	.	+	0	ID=cds1644;Parent=gene1676;Dbxref=Genbank:NP_625954.1,GeneID:1097110;Name=NP_625954.1;Note=SCI52.21%2C probable gluconokinase%2C len: 175 aa%3B similar to SW:IDNK_ECOLI (EMBL:U14003) Escherichia coli thermosensitive gluconokinase (EC 2.7.1.12) IdnK or GntV or B4268%2C 187 aa%3B fasta scores: opt: 434 Z-score: 502.9 bits: 99.6 E(): 2e-20%3B 43.125%25 identity in 160 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI52.21;product=gluconokinase;protein_id=NP_625954.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1798600	1798623	.	+	.	ID=id2190;Dbxref=GeneID:1097110;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI52.21
NC_003888.3	RefSeq	gene	1799183	1800580	.	+	.	ID=gene1677;Dbxref=GeneID:1097111;Name=SCI30A.01;gbkey=Gene;gene=SCI30A.01;gene_biotype=protein_coding;gene_synonym=SCI30A.01,SCI52.22;locus_tag=SCO1680
NC_003888.3	RefSeq	CDS	1799183	1800580	.	+	0	ID=cds1645;Parent=gene1677;Dbxref=Genbank:NP_733541.1,GeneID:1097111;Name=NP_733541.1;Note=SCI30A.01%2C partial CDS%2C probable gluconate permease%2C len: 359aa%3B similar to many eg. SW:GNTT_ECOLI high affinity gluconate transporter from Escherichia coli (437 aa) fasta scores%3B opt: 998%2C z-score: 1067.1%2C E(): 0%2C (42.1%25 identity in 359 aa overlap). Contains possible membrane spanning hydrophobic regions.~SCI52.22%2C probable gluconate permease (fragment)%2C len: >144 aa%3B similar to N-terminal region of SW:GNUT_PSEAE (EMBL:AF026470) Pseudomonas aeruginosa gluconate permease GnuT or PA2322%2C 450 aa%3B fasta scores: opt: 370 Z-score: 442.1 bits: 89.4 E(): 4.8e-17%3B 44.262%25 identity in 122 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI30A.01;product=gluconate permease;protein_id=NP_733541.1;transl_table=11
NC_003888.3	RefSeq	gene	1800620	1801381	.	+	.	ID=gene1678;Dbxref=GeneID:1097112;Name=SCI30A.02;gbkey=Gene;gene=SCI30A.02;gene_biotype=protein_coding;gene_synonym=SCI30A.02;locus_tag=SCO1681
NC_003888.3	RefSeq	CDS	1800620	1801381	.	+	0	ID=cds1646;Parent=gene1678;Dbxref=Genbank:NP_625955.1,GeneID:1097112;Name=NP_625955.1;Note=SCI30A.02%2C probable gluconate dehydrogenase%2C len: 253 aa%3B similar to many eg. SW:GNO_GLUOX gluconate 5-dehydrogenase from Gluconobacter oxydans (256 aa) fasta scores%3B opt: 985%2C z-score: 1113.1%2C E(): 0%2C (58.0%25 identity in 255 aa overlap). Contains Pfam matches to entry PF00106 adh_short%2C short chain dehydrogenase and to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=CDS;gene=SCI30A.02;product=gluconate dehydrogenase;protein_id=NP_625955.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1800653	1801198	.	+	.	ID=id2191;Dbxref=GeneID:1097112;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 246.50%2C E-value 3.7e-70.;gbkey=misc_feature;gene=SCI30A.02
NC_003888.3	RefSeq	sequence_feature	1801049	1801135	.	+	.	ID=id2192;Dbxref=GeneID:1097112;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SCI30A.02
NC_003888.3	RefSeq	sequence_feature	1801262	1801354	.	+	.	ID=id2193;Dbxref=GeneID:1097112;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 41.20%2C E-value 2.3e-08.;gbkey=misc_feature;gene=SCI30A.02
NC_003888.3	RefSeq	gene	1801378	1802454	.	+	.	ID=gene1679;Dbxref=GeneID:1097113;Name=SCI30A.03;gbkey=Gene;gene=SCI30A.03;gene_biotype=protein_coding;gene_synonym=SCI30A.03;locus_tag=SCO1682
NC_003888.3	RefSeq	CDS	1801378	1802454	.	+	0	ID=cds1647;Parent=gene1679;Dbxref=Genbank:NP_625956.1,GeneID:1097113;Name=NP_625956.1;Note=SCI30A.03%2C probable zinc-binding alcohol dehydrogenase%2C len: 358 aa%3B similar to many both prokaryote and eukaryote e.g. SW:DHSO_BACSU sorbitol dehydrogenase from Bacillus subtilis (352 aa) fasta scores%3B opt: 616%2C z-score: 638.0%2C E(): 3.3e-28%2C (32.7%25 identity in 352 aa overlap) and DHSO_SHEEP sorbitol dehydrogenase from Ovis aries (sheep) (354 aa) fasta scores%3B opt: 606%2C z-score: 627.7%2C E(): 1.2e-27%2C (34.6%25 identity in 344 aa overlap). Conatins Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=CDS;gene=SCI30A.03;product=zinc-binding alcohol dehydrogenase;protein_id=NP_625956.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1801420	1802427	.	+	.	ID=id2194;Dbxref=GeneID:1097113;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 218.20%2C E-value 1.2e-61.;gbkey=misc_feature;gene=SCI30A.03
NC_003888.3	RefSeq	gene	1802529	1804067	.	-	.	ID=gene1680;Dbxref=GeneID:1097114;Name=SCI30A.04c;gbkey=Gene;gene=SCI30A.04c;gene_biotype=protein_coding;gene_synonym=SCI30A.04c;locus_tag=SCO1683
NC_003888.3	RefSeq	CDS	1802529	1804067	.	-	0	ID=cds1648;Parent=gene1680;Dbxref=Genbank:NP_625957.1,GeneID:1097114;Name=NP_625957.1;Note=SCI30A.04c%2C possible amino acid permease%2C len: 512 aa%3B similar to many e.g. TR:Q53148 (EMBL:L24492) ethanolamine permease from Rhodococcus sp. strain NI86/21 (488 aa) fasta scores%3B opt: 266%2C z-score: 293.8%2C E(): 4.9e-09%2C (26.7%25 identity in 397 aa overlap). Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease. Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI30A.04c;product=amino acid permease;protein_id=NP_625957.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1802712	1803926	.	-	.	ID=id2195;Dbxref=GeneID:1097114;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -301.40%2C E-value 0.16.;gbkey=misc_feature;gene=SCI30A.04c
NC_003888.3	RefSeq	gene	1804126	1805142	.	-	.	ID=gene1681;Dbxref=GeneID:1097115;Name=SCI30A.05c;gbkey=Gene;gene=SCI30A.05c;gene_biotype=protein_coding;gene_synonym=SCI30A.05c;locus_tag=SCO1684
NC_003888.3	RefSeq	CDS	1804126	1805142	.	-	0	ID=cds1649;Parent=gene1681;Dbxref=Genbank:NP_625958.1,GeneID:1097115;Name=NP_625958.1;Note=SCI30A.05c%2C unknown%2C len: 338aa;gbkey=CDS;gene=SCI30A.05c;product=hypothetical protein;protein_id=NP_625958.1;transl_table=11
NC_003888.3	RefSeq	gene	1805384	1806277	.	+	.	ID=gene1682;Dbxref=GeneID:1097116;Name=SCI30A.06;gbkey=Gene;gene=SCI30A.06;gene_biotype=protein_coding;gene_synonym=SCI30A.06;locus_tag=SCO1685
NC_003888.3	RefSeq	CDS	1805384	1806277	.	+	0	ID=cds1650;Parent=gene1682;Dbxref=Genbank:NP_625959.1,GeneID:1097116;Name=NP_625959.1;Note=SCI30A.06%2C possible integral membrane protein%2C len: 297aa%3B similar to many egs. TR:O33234 (EMBL:Z98209) hypothetical protein from Mycobacterium tuberculosis (301 aa) fasta scores%3B opt: 356%2C z-score: 407.0%2C E(): 2.4e-15%2C (31.5%25 identity in 289 aa overlap) and TR:O86668 (EMBL:AL031182) integral membrane protein from Streptomyces coelicolor (299 aa) fasta scores%3B opt: 272%2C z-score: 312.9%2C E(): 4.2e-10%2C (31.5%25 identity in 279 aa overlap).;gbkey=CDS;gene=SCI30A.06;product=hypothetical protein;protein_id=NP_625959.1;transl_table=11
NC_003888.3	RefSeq	gene	1806297	1806842	.	+	.	ID=gene1683;Dbxref=GeneID:1097117;Name=SCI30A.07;gbkey=Gene;gene=SCI30A.07;gene_biotype=protein_coding;gene_synonym=SCI30A.07;locus_tag=SCO1686
NC_003888.3	RefSeq	CDS	1806297	1806842	.	+	0	ID=cds1651;Parent=gene1683;Dbxref=Genbank:NP_625960.1,GeneID:1097117;Name=NP_625960.1;Note=SCI30A.07%2C possible NTP pyrophosphohydrolase%2C len: 181 aa%3B similar to many e.g. TR:Q53738 (EMBL:X92429) from the puromycin biosynthetic pathway of Streptomyces alboniger (152 aa) fasta scores%3B opt: 170%2C z-score: 226.2%2C E(): 2.9e-05%2C (35.7%25 identity in 129 aa overlap). Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein.;gbkey=CDS;gene=SCI30A.07;product=NTP pyrophosphohydrolase;protein_id=NP_625960.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1806447	1806581	.	+	.	ID=id2196;Dbxref=GeneID:1097117;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 20.70%2C E-value 0.00021.;gbkey=misc_feature;gene=SCI30A.07
NC_003888.3	RefSeq	repeat_region	1807087	1807293	.	+	.	ID=id2197;Note=G-rich repeat region.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1807505	1807897	.	+	.	ID=gene1684;Dbxref=GeneID:1097118;Name=SCI30A.08;gbkey=Gene;gene=SCI30A.08;gene_biotype=protein_coding;gene_synonym=SCI30A.08;locus_tag=SCO1687
NC_003888.3	RefSeq	CDS	1807505	1807897	.	+	0	ID=cds1652;Parent=gene1684;Dbxref=Genbank:NP_625961.1,GeneID:1097118;Name=NP_625961.1;Note=SCI30A.08%2C membrane protein%2C len: 130 aa%3B similar to SW:YIDH_ECOLI hypothetical protein from Escherichia coli (115 aa) fasta scores%3B opt: 291%2C z-score: 382.3%2C E(): 5.8e-14%2C (47.3%25 identity in 112 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI30A.08;product=hypothetical protein;protein_id=NP_625961.1;transl_table=11
NC_003888.3	RefSeq	gene	1807900	1808241	.	+	.	ID=gene1685;Dbxref=GeneID:1097119;Name=SCI30A.09;gbkey=Gene;gene=SCI30A.09;gene_biotype=protein_coding;gene_synonym=SCI30A.09;locus_tag=SCO1688
NC_003888.3	RefSeq	CDS	1807900	1808241	.	+	0	ID=cds1653;Parent=gene1685;Dbxref=Genbank:NP_625962.1,GeneID:1097119;Name=NP_625962.1;Note=SCI30A.09%2C membrane protein%2C len: 113 aa%3B similar to SW:YU38_MYCTU hypothetical protein from Mycobacterium tuberculosis (122 aa) fasta scores%3B opt: 105%2C z-score: 141.8%2C E(): 1.4%2C (34.2%25 identity in 120 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI30A.09;product=hypothetical protein;protein_id=NP_625962.1;transl_table=11
NC_003888.3	RefSeq	gene	1808375	1809400	.	+	.	ID=gene1686;Dbxref=GeneID:1097120;Name=SCI30A.10;gbkey=Gene;gene=SCI30A.10;gene_biotype=protein_coding;gene_synonym=SCI30A.10;locus_tag=SCO1689
NC_003888.3	RefSeq	CDS	1808375	1809400	.	+	0	ID=cds1654;Parent=gene1686;Dbxref=Genbank:NP_625963.1,GeneID:1097120;Name=NP_625963.1;Note=SCI30A.10%2C possible phosphotransferase%2C len: 341 aa%3B similar to TR:O69727 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (351 aa) fasta scores%3B opt: 872%2C z-score: 1004.6%2C E(): 0%2C (43.1%25 identity in 350 aa overlap). Also weakly similar to TR:Q53826 (EMBL:U13078) capreomycin phopshotransferase from Streptomyces capreolus (281 aa) fasta scores%3B opt: 142%2C z-score: 169.4%2C E(): 0.042%2C (29.1%25 identity in 172 aa overlap).;gbkey=CDS;gene=SCI30A.10;product=phosphotransferase;protein_id=NP_625963.1;transl_table=11
NC_003888.3	RefSeq	gene	1809406	1810620	.	+	.	ID=gene1687;Dbxref=GeneID:1097121;Name=SCI30A.11;gbkey=Gene;gene=SCI30A.11;gene_biotype=protein_coding;gene_synonym=SCI30A.11;locus_tag=SCO1690
NC_003888.3	RefSeq	CDS	1809406	1810620	.	+	0	ID=cds1655;Parent=gene1687;Dbxref=Genbank:NP_625964.1,GeneID:1097121;Name=NP_625964.1;Note=SCI30A.11%2C possible acyl-CoA dehydrogenase%2C len: 404 aa%3B varying similarity to many e.g. TR:P96831 (EMBL:Z92770) hypothetical protein from Mycobacterium tuberculosis (403 aa) fasta scores%3B opt: 1464%2C z-score: 1688.2%2C E(): 0%2C (57.3%25 identity in 400 aa overlap) and SW:ACDB_BACSU acyl-CoA dehydrogenase from Bacillus subtilis (379 aa) fasta scores%3B opt: 465%2C z-score: 539.6%2C E(): 1e-22%2C (32.0%25 identity in 347 aa overlap). Contains two Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase;gbkey=CDS;gene=SCI30A.11;product=acyl-CoA dehydrogenase;protein_id=NP_625964.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1809751	1810047	.	+	.	ID=id2198;Dbxref=GeneID:1097121;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 37.20%2C E-value 4.3e-10.;gbkey=misc_feature;gene=SCI30A.11
NC_003888.3	RefSeq	sequence_feature	1810093	1810386	.	+	.	ID=id2199;Dbxref=GeneID:1097121;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 40.10%2C E-value 6.2e-11.;gbkey=misc_feature;gene=SCI30A.11
NC_003888.3	RefSeq	gene	1810631	1811386	.	-	.	ID=gene1688;Dbxref=GeneID:1097122;Name=SCI30A.12c;gbkey=Gene;gene=SCI30A.12c;gene_biotype=protein_coding;gene_synonym=SCI30A.12c;locus_tag=SCO1691
NC_003888.3	RefSeq	CDS	1810631	1811386	.	-	0	ID=cds1656;Parent=gene1688;Dbxref=Genbank:NP_625965.1,GeneID:1097122;Name=NP_625965.1;Note=SCI30A.12c%2C possible tetR transcriptional regulator%2C len: 251 aa%3B similar to many e.g. SW:BM3R_BACME transcriptional repressor from Bacillus megaterium (192 aa) fasta scores%3B opt: 190%2C z-score: 227.2%2C E(): 2.5e-05%2C (26.7%25 identity in 176 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and Prosite match to PS01081 Bacterial regulatory proteins%2C tetR family signature. Contains possible helix-turn-helix motif (+3.97 SD) 87-108aa.;gbkey=CDS;gene=SCI30A.12c;product=TetR family transcriptional regulator;protein_id=NP_625965.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1811039	1811179	.	-	.	ID=id2200;Dbxref=GeneID:1097122;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 70.30%2C E-value 8.6e-18.;gbkey=misc_feature;gene=SCI30A.12c
NC_003888.3	RefSeq	sequence_feature	1811051	1811143	.	-	.	ID=id2201;Dbxref=GeneID:1097122;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;gene=SCI30A.12c
NC_003888.3	RefSeq	gene	1811383	1812153	.	-	.	ID=gene1689;Dbxref=GeneID:1097123;Name=SCI30A.13c;gbkey=Gene;gene=SCI30A.13c;gene_biotype=protein_coding;gene_synonym=SCI30A.13c;locus_tag=SCO1692
NC_003888.3	RefSeq	CDS	1811383	1812153	.	-	0	ID=cds1657;Parent=gene1689;Dbxref=Genbank:NP_625966.1,GeneID:1097123;Name=NP_625966.1;Note=SCI30A.13c%2C possible oxidoreductase%2C len: 256 aa%3B similar to many e.g. SW:FABG_ECOLI 3-oxoacyl-(carrier protein) reductase from Escherichia coli (244 aa) fasta scores%3B opt: 239%2C z-score: 270.9%2C E(): 9.2e-08%2C (27.3%25 identity in 198 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=CDS;gene=SCI30A.13c;product=oxidoreductase;protein_id=NP_625966.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1811611	1812132	.	-	.	ID=id2202;Dbxref=GeneID:1097123;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 100.90%2C E-value 2.5e-26.;gbkey=misc_feature;gene=SCI30A.13c
NC_003888.3	RefSeq	sequence_feature	1811674	1811760	.	-	.	ID=id2203;Dbxref=GeneID:1097123;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SCI30A.13c
NC_003888.3	RefSeq	gene	1812259	1813536	.	-	.	ID=gene1690;Dbxref=GeneID:1097124;Name=SCI30A.14c;gbkey=Gene;gene=SCI30A.14c;gene_biotype=protein_coding;gene_synonym=SCI30A.14c;locus_tag=SCO1693
NC_003888.3	RefSeq	CDS	1812259	1813536	.	-	0	ID=cds1658;Parent=gene1690;Dbxref=Genbank:NP_625967.1,GeneID:1097124;Name=NP_625967.1;Note=SCI30A.14c%2C unknown%2C len: 425aa;gbkey=CDS;gene=SCI30A.14c;product=hypothetical protein;protein_id=NP_625967.1;transl_table=11
NC_003888.3	RefSeq	gene	1813616	1816297	.	-	.	ID=gene1691;Dbxref=GeneID:1097125;Name=SCI30A.15c;gbkey=Gene;gene=SCI30A.15c;gene_biotype=protein_coding;gene_synonym=SCI30A.15c;locus_tag=SCO1694
NC_003888.3	RefSeq	CDS	1813616	1816297	.	-	0	ID=cds1659;Parent=gene1691;Dbxref=Genbank:NP_625968.1,GeneID:1097125;Name=NP_625968.1;Note=SCI30A.15c%2C possible penicillin acylase%2C len: 893 aa%3B similar to many eg. SW:PAC_ARTVI penicillin acylase from Arthrobacter viscosus (ATCC 15294) (802 aa) fasta scores%3B opt: 379%2C z-score: 409.2%2C E(): 1.8e-15%2C (25.5%25 identity in 733 aa overlap).;gbkey=CDS;gene=SCI30A.15c;product=penicillin acylase;protein_id=NP_625968.1;transl_table=11
NC_003888.3	RefSeq	gene	1816646	1817248	.	+	.	ID=gene1692;Dbxref=GeneID:1097126;Name=SCI30A.16;gbkey=Gene;gene=SCI30A.16;gene_biotype=protein_coding;gene_synonym=SCI30A.16;locus_tag=SCO1695
NC_003888.3	RefSeq	CDS	1816646	1817248	.	+	0	ID=cds1660;Parent=gene1692;Dbxref=Genbank:NP_625969.1,GeneID:1097126;Name=NP_625969.1;Note=SCI30A.16%2C unknown%2C len: 200aa;gbkey=CDS;gene=SCI30A.16;product=hypothetical protein;protein_id=NP_625969.1;transl_table=11
NC_003888.3	RefSeq	gene	1817349	1818083	.	+	.	ID=gene1693;Dbxref=GeneID:1097127;Name=SCI30A.17;gbkey=Gene;gene=SCI30A.17;gene_biotype=protein_coding;gene_synonym=SCI30A.17;locus_tag=SCO1696
NC_003888.3	RefSeq	CDS	1817349	1818083	.	+	0	ID=cds1661;Parent=gene1693;Dbxref=Genbank:NP_625970.1,GeneID:1097127;Name=NP_625970.1;Note=SCI30A.17%2C unknown%2C len: 244 aa%3B similar to TR:P71976 (EMBL:Z81360) hypothetical protein from Mycobacterium tuberculosis (272 aa) fasta scores%3B opt: 192%2C z-score: 223.1%2C E(): 4.3e-05%2C (26.7%25 identity in 236 aa overlap) and to TR:Q98JP6 (EMBL:AP002998) Rhizobium loti (Mesorhizobium loti) MLL1845 241 aa%3B fasta scores: opt: 534 Z-score: 595.0 E(): 1.7e-25%3B 41.564%25 identity in 243 aa overlap;gbkey=CDS;gene=SCI30A.17;product=hypothetical protein;protein_id=NP_625970.1;transl_table=11
NC_003888.3	RefSeq	gene	1818351	1818878	.	-	.	ID=gene1694;Dbxref=GeneID:1097128;Name=SCI30A.18c;gbkey=Gene;gene=SCI30A.18c;gene_biotype=protein_coding;gene_synonym=SCI30A.18c;locus_tag=SCO1697
NC_003888.3	RefSeq	CDS	1818351	1818878	.	-	0	ID=cds1662;Parent=gene1694;Dbxref=Genbank:NP_625971.1,GeneID:1097128;Name=NP_625971.1;Note=SCI30A.18c%2C probable merR-family transcriptional regulator%2C len: 175aa%3B similar to many egs. TR:CAA09641 (EMBL:AJ011500) from Streptomyces violaceoruber Tu22 (196 aa) fasta scores%3B opt: 698%2C z-score: 833.1%2C E(): 0%2C (64.1%25 identity in 167 aa overlap) and SW:SOXR_ECOLI SoxR transcriptional regulator from Escherichia coli (154 aa) fasta scores%3B opt: 575%2C z-score: 689.9%2C E(): 4.3e-31%2C (60.3%25 identity in 146 aa overlap). Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family.;gbkey=CDS;gene=SCI30A.18c;product=MerR family transcriptional regulator;protein_id=NP_625971.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1818735	1818839	.	-	.	ID=id2204;Dbxref=GeneID:1097128;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 43.20%2C E-value 5.8e-09.;gbkey=misc_feature;gene=SCI30A.18c
NC_003888.3	RefSeq	gene	1819009	1819470	.	+	.	ID=gene1695;Dbxref=GeneID:1097129;Name=SCI30A.19;gbkey=Gene;gene=SCI30A.19;gene_biotype=protein_coding;gene_synonym=SCI30A.19;locus_tag=SCO1698
NC_003888.3	RefSeq	CDS	1819009	1819470	.	+	0	ID=cds1663;Parent=gene1695;Dbxref=Genbank:NP_625972.1,GeneID:1097129;Name=NP_625972.1;Note=SCI30A.19%2C unknown%2C len: 153 aa%3B similar to many of undefined function e.g. TR:P96807 (EMBL:Z92770) hypothetical protein from Mycobacterium tuberculosis (151 aa) fasta scores%3B opt: 639%2C z-score: 785.9%2C E(): 0%2C (60.8%25 identity in 148 aa overlap) and SW:NODN_RHILV nodulation protein from Rhizobium leguminosarum (161 aa) fasta scores%3B opt: 388%2C z-score: 482.2%2C E(): 1.6e-19%2C (44.8%25 identity in 145 aa overlap);gbkey=CDS;gene=SCI30A.19;product=hypothetical protein;protein_id=NP_625972.1;transl_table=11
NC_003888.3	RefSeq	gene	1819461	1820108	.	-	.	ID=gene1696;Dbxref=GeneID:1097130;Name=SCI30A.20c;gbkey=Gene;gene=SCI30A.20c;gene_biotype=protein_coding;gene_synonym=SCI30A.20c;locus_tag=SCO1699
NC_003888.3	RefSeq	CDS	1819461	1820108	.	-	0	ID=cds1664;Parent=gene1696;Dbxref=Genbank:NP_625973.1,GeneID:1097130;Name=NP_625973.1;Note=SCI30A.20c%2C possible transcriptional regulator%2C len: 215 aa%3B similar to many e.g. TR:CAB39717 (EMBL:AL049485) regulatory protein from Streptomyces coelicolor (223 aa) fasta scores%3B opt: 330%2C z-score: 413.5%2C E(): 1.1e-15%2C (33.8%25 identity in 216 aa overlap) and TR:AAD13556 (EMBL:AF080235) LanK regulator of landomycin biosynthesis in Streptomyces cyanogenus S136 (192 aa) fasta scores%3B opt: 170%2C z-score: 218.6%2C E(): 7.6e-05%2C (31.8%25 identity in 154 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Contains possible helix-turn-helix motif (+4.32 SD) 43-64aa.;gbkey=CDS;gene=SCI30A.20c;product=transcriptional regulator;protein_id=NP_625973.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1819893	1820033	.	-	.	ID=id2205;Dbxref=GeneID:1097130;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 60.70%2C E-value 4e-15.;gbkey=misc_feature;gene=SCI30A.20c
NC_003888.3	RefSeq	gene	1820169	1820483	.	-	.	ID=gene1697;Dbxref=GeneID:1097131;Name=SCI30A.21c;gbkey=Gene;gene=SCI30A.21c;gene_biotype=protein_coding;gene_synonym=SCI30A.21c;locus_tag=SCO1700
NC_003888.3	RefSeq	CDS	1820169	1820483	.	-	0	ID=cds1665;Parent=gene1697;Dbxref=Genbank:NP_625974.1,GeneID:1097131;Name=NP_625974.1;Note=SCI30A.21c%2C membrane protein%2C len: 104 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI30A.21c;product=hypothetical protein;protein_id=NP_625974.1;transl_table=11
NC_003888.3	RefSeq	gene	1820559	1821710	.	-	.	ID=gene1698;Dbxref=GeneID:1097132;Name=SCI30A.22c;gbkey=Gene;gene=SCI30A.22c;gene_biotype=protein_coding;gene_synonym=SCI30A.22c;locus_tag=SCO1701
NC_003888.3	RefSeq	CDS	1820559	1821710	.	-	0	ID=cds1666;Parent=gene1698;Dbxref=Genbank:NP_625975.1,GeneID:1097132;Name=NP_625975.1;Note=SCI30A.22c%2C probable acyl-CoA dehydrogenase%2C len: 383 aa%3B similar to many both prokaryote and eukaryote eg. SW:ACDB_BACSU acyl-CoA dehydrogenase from Bacillus subtilis (379 aa) fasta scores%3B opt: 109%2C1 z-score: 1197.8%2C E(): 0%2C (43.8%25 identity in 377 aa overlap) and SW:ACDS_RAT acyl-CoA dehydrogenase from Rattus norvegicus (Rat) (412 aa) fasta scores%3B opt: 1079%2C z-score: 1184.2%2C E(): 0%2C (44.6%25 identity in 372 aa overlap). Contains Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase.;gbkey=CDS;gene=SCI30A.22c;product=acyl-CoA dehydrogenase;protein_id=NP_625975.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1820586	1821698	.	-	.	ID=id2206;Dbxref=GeneID:1097132;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 565.20%2C E-value 4.3e-166.;gbkey=misc_feature;gene=SCI30A.22c
NC_003888.3	RefSeq	gene	1821800	1822441	.	+	.	ID=gene1699;Dbxref=GeneID:1097133;Name=SCI30A.23;gbkey=Gene;gene=SCI30A.23;gene_biotype=protein_coding;gene_synonym=SCI30A.23;locus_tag=SCO1702
NC_003888.3	RefSeq	CDS	1821800	1822441	.	+	0	ID=cds1667;Parent=gene1699;Dbxref=Genbank:NP_625976.1,GeneID:1097133;Name=NP_625976.1;Note=SCI30A.23%2C possible transcriptional regulator%2C len: 213 aa%3B similar to many e.g. TR:Q53901 (EMBL:M64683) regulatory protein from Streptomyces coelicolor (259 aa) fasta scores%3B opt: 227%2C z-score: 273.2%2C E(): 6.9e-08%2C (32.3%25 identity in 217 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and Prosite match to PS01081 Bacterial regulatory proteins%2C tetR family signature. Contains possible helix-turn-helix motif (+5.17 SD) 31-52aa.;gbkey=CDS;gene=SCI30A.23;product=transcriptional regulator;protein_id=NP_625976.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1821839	1821979	.	+	.	ID=id2207;Dbxref=GeneID:1097133;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.00%2C E-value 9.2e-11.;gbkey=misc_feature;gene=SCI30A.23
NC_003888.3	RefSeq	sequence_feature	1821875	1821967	.	+	.	ID=id2208;Dbxref=GeneID:1097133;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;gene=SCI30A.23
NC_003888.3	RefSeq	gene	1822505	1823218	.	+	.	ID=gene1700;Dbxref=GeneID:1097134;Name=SCI30A.24;gbkey=Gene;gene=SCI30A.24;gene_biotype=protein_coding;gene_synonym=SCI30A.24;locus_tag=SCO1703
NC_003888.3	RefSeq	CDS	1822505	1823218	.	+	0	ID=cds1668;Parent=gene1700;Dbxref=Genbank:NP_625977.1,GeneID:1097134;Name=NP_625977.1;Note=SCI30A.24%2C possible transcriptional regulator%2C len: 237aa%3B similar to many eg. SW:MERR_STRLI probable mercury resistance operon repressor from Streptomyces lividans (125 aa) fasta scores%3B opt: 144%2C z-score: 183.3%2C E(): 0.007%2C (38.2%25 identity in 89 aa overlap). Contains Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family. Contains possible helix-turn-helix motif (+3.92 SD) 37-58aa.;gbkey=CDS;gene=SCI30A.24;product=transcriptional regulator;protein_id=NP_625977.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1822547	1822783	.	+	.	ID=id2209;Dbxref=GeneID:1097134;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 55.80%2C E-value 9.1e-13.;gbkey=misc_feature;gene=SCI30A.24
NC_003888.3	RefSeq	gene	1823292	1824266	.	+	.	ID=gene1701;Dbxref=GeneID:1097135;Name=SCI30A.25;gbkey=Gene;gene=SCI30A.25;gene_biotype=protein_coding;gene_synonym=SCI30A.25;locus_tag=SCO1704
NC_003888.3	RefSeq	CDS	1823292	1824266	.	+	0	ID=cds1669;Parent=gene1701;Dbxref=Genbank:NP_625978.1,GeneID:1097135;Name=NP_625978.1;Note=SCI30A.25%2C possible integral membrane conserved hypothetical protein%2C len: 324aa%3B similar to many eg. SW:YDFC_BACSU hypothetical protein from Bacillus subtilis (306 aa) fasta scores%3B opt: 485%2C z-score: 529.4%2C E(): 3.7e-22%2C (34.2%25 identity in 269 aa overlap). Contains 2 Pfam matches to entry PF00892 DUF6%2C Integral membrane protein and several possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI30A.25;product=hypothetical protein;protein_id=NP_625978.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1823379	1823771	.	+	.	ID=id2210;Dbxref=GeneID:1097135;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 27.00%2C E-value 0.00045.;gbkey=misc_feature;gene=SCI30A.25
NC_003888.3	RefSeq	sequence_feature	1823811	1824218	.	+	.	ID=id2211;Dbxref=GeneID:1097135;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 58.40%2C E-value 1.5e-13.;gbkey=misc_feature;gene=SCI30A.25
NC_003888.3	RefSeq	gene	1824517	1825614	.	-	.	ID=gene1702;Dbxref=GeneID:1097136;Name=SCI30A.26c;gbkey=Gene;gene=SCI30A.26c;gene_biotype=protein_coding;gene_synonym=SCI30A.26c;locus_tag=SCO1705
NC_003888.3	RefSeq	CDS	1824517	1825614	.	-	0	ID=cds1670;Parent=gene1702;Dbxref=Genbank:NP_625979.1,GeneID:1097136;Name=NP_625979.1;Note=SCI30A.26c%2C probable alcohol dehydrogenase (zinc-binding)%2C len: 365 aa%3B similar to many e.g. SW:ADH3_ECOLI alcohol dehydrogenase class III from Escherichia coli (369 aa) fasta scores%3B opt: 819%2C z-score: 864.3%2C E(): 0%2C (38.6%25 identity in 368 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and Prosite matche to PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=CDS;gene=SCI30A.26c;product=alcohol dehydrogenase;protein_id=NP_625979.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1824523	1825590	.	-	.	ID=id2212;Dbxref=GeneID:1097136;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 338.50%2C E-value 7.6e-98.;gbkey=misc_feature;gene=SCI30A.26c
NC_003888.3	RefSeq	sequence_feature	1825381	1825425	.	-	.	ID=id2213;Dbxref=GeneID:1097136;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=misc_feature;gene=SCI30A.26c
NC_003888.3	RefSeq	gene	1825638	1827026	.	-	.	ID=gene1703;Dbxref=GeneID:1097137;Name=SCI30A.27c;gbkey=Gene;gene=SCI30A.27c;gene_biotype=protein_coding;gene_synonym=SCI30A.27c;locus_tag=SCO1706
NC_003888.3	RefSeq	CDS	1825638	1827026	.	-	0	ID=cds1671;Parent=gene1703;Dbxref=Genbank:NP_625980.1,GeneID:1097137;Name=NP_625980.1;Note=SCI30A.27c%2C probable aldehyde dehydrogenase%2C len: 462 aa%3B similar to many e.g. TR:O33455 (EMBL:U24215) P-cumic aldehyde dehydrogenase from Pseudomonas putida Fl (494 aa) fasta scores%3B opt: 1109%2C z-score: 1142.8%2C E(): 0%2C (44.6%25 identity in 471 aa overlap) and TR:O88069 (EMBL:AL031541) aldehyde dehydrogenase from Streptomyces coelicolor (483 aa) fasta scores%3B opt: 1011%2C z-score: 1042.5%2C E(): 0%2C (41.8%25 identity in 466 aa overlap). Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase and Prosite match to PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=CDS;gene=SCI30A.27c;product=aldehyde dehydrogenase;protein_id=NP_625980.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1825641	1826993	.	-	.	ID=id2214;Dbxref=GeneID:1097137;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase%2C score 560.20%2C E-value 1.4e-164.;gbkey=misc_feature;gene=SCI30A.27c
NC_003888.3	RefSeq	sequence_feature	1826274	1826297	.	-	.	ID=id2215;Dbxref=GeneID:1097137;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;gene=SCI30A.27c
NC_003888.3	RefSeq	gene	1827151	1828488	.	-	.	ID=gene1704;Dbxref=GeneID:1097138;Name=SCI30A.28c;gbkey=Gene;gene=SCI30A.28c;gene_biotype=protein_coding;gene_synonym=SCI30A.28c;locus_tag=SCO1707
NC_003888.3	RefSeq	CDS	1827151	1828488	.	-	0	ID=cds1672;Parent=gene1704;Dbxref=Genbank:NP_625981.1,GeneID:1097138;Name=NP_625981.1;Note=SCI30A.28c%2C probable ABC sugar transporter%2C ATP-binding subunit%2C len: 445aa%3B similar to many eg. TR:AAD24578 (EMBL:AF126010) trehalose/maltose transport ATP-hydrolysing subunit from hyperthermophilic archaeon Thermococcus litoralis (372 aa) fasta scores%3B opt: 975%2C z-score: 1068.2%2C E(): 0%2C (50.1%25 identity in 335 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCI30A.28c;product=ABC sugar transporter%2C ATP-binding subunit;protein_id=NP_625981.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1827856	1828398	.	-	.	ID=id2216;Dbxref=GeneID:1097138;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 210.00%2C E-value 3.7e-59.;gbkey=misc_feature;gene=SCI30A.28c
NC_003888.3	RefSeq	sequence_feature	1828042	1828086	.	-	.	ID=id2217;Dbxref=GeneID:1097138;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SCI30A.28c
NC_003888.3	RefSeq	sequence_feature	1828354	1828377	.	-	.	ID=id2218;Dbxref=GeneID:1097138;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCI30A.28c
NC_003888.3	RefSeq	gene	1828712	1828912	.	-	.	ID=gene1705;Dbxref=GeneID:1097139;Name=SCI30A.29c;gbkey=Gene;gene=SCI30A.29c;gene_biotype=protein_coding;gene_synonym=SCI30A.29c;locus_tag=SCO1708
NC_003888.3	RefSeq	CDS	1828712	1828912	.	-	0	ID=cds1673;Parent=gene1705;Dbxref=Genbank:NP_625982.1,GeneID:1097139;Name=NP_625982.1;Note=SCI30A.29c%2C membrane protein%2C len: 66 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCI30A.29c;product=hypothetical protein;protein_id=NP_625982.1;transl_table=11
NC_003888.3	RefSeq	gene	1828915	1830306	.	-	.	ID=gene1706;Dbxref=GeneID:1097140;Name=SCI30A.30c;gbkey=Gene;gene=SCI30A.30c;gene_biotype=protein_coding;gene_synonym=SCI30A.30c;locus_tag=SCO1709
NC_003888.3	RefSeq	CDS	1828915	1830306	.	-	0	ID=cds1674;Parent=gene1706;Dbxref=Genbank:NP_625983.1,GeneID:1097140;Name=NP_625983.1;Note=SCI30A.30c%2C possible integral membrane transport protein%2C len: 463aa%3B weak similarity to many eg. TR:Q45632 (EMBL:L13418) maltose permease from Bacillus stearothermophilus (394 aa) fasta scores%3B opt: 220%2C z-score: 200.9%2C E(): 0.00074%2C (28.7%25 identity in 363 aa overlap). Contains a 13x9bp degenerate repeat G/S)GA in the C-terminal region similar to one found in the N-terminal region of TR:Q94673 (EMBL:U72957) merozoite surface protein-2 of Plasmodium falciparum (176 aa) fasta scores%3B opt: 237%2C z-score: 219.6%2C E(): 6.7e-05%2C (45.4%25 identity in 97 aa overlap). Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI30A.30c;product=integral membrane transport protein;protein_id=NP_625983.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1829011	1829127	.	-	.	ID=id2219;Dbxref=GeneID:1097140;Note=13x9bp degenerate repeat translating to (G/S)GA in the C-terminal region of I30A.30c.;gbkey=repeat_region;gene=SCI30A.30c
NC_003888.3	RefSeq	gene	1830346	1831797	.	-	.	ID=gene1707;Dbxref=GeneID:1097141;Name=SCI30A.31c;gbkey=Gene;gene=SCI30A.31c;gene_biotype=protein_coding;gene_synonym=SCI30A.31c;locus_tag=SCO1710
NC_003888.3	RefSeq	CDS	1830346	1831797	.	-	0	ID=cds1675;Parent=gene1707;Dbxref=Genbank:NP_625984.1,GeneID:1097141;Name=NP_625984.1;Note=SCI30A.31c%2C possible integral membrane transport protein%2C len: 483aa%3B similar to SW:CITM_BACSU Mg2+/citrate complex secondary transporter from Bacillus subtilis (433 aa) fasta scores%3B opt: 687%2C z-score: 644.4%2C E(): 1.5e-28%2C (45.7%25 identity in 484 aa overlap). Contains Gly/Ala-rich region 220-250aa. Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI30A.31c;product=integral membrane transport protein;protein_id=NP_625984.1;transl_table=11
NC_003888.3	RefSeq	gene	1831921	1834164	.	-	.	ID=gene1708;Dbxref=GeneID:1097142;Name=SCI30A.32c;gbkey=Gene;gene=SCI30A.32c;gene_biotype=protein_coding;gene_synonym=SCI30A.32c;locus_tag=SCO1711
NC_003888.3	RefSeq	CDS	1831921	1834164	.	-	0	ID=cds1676;Parent=gene1708;Dbxref=Genbank:NP_625985.1,GeneID:1097142;Name=NP_625985.1;Note=SCI30A.32c%2C possible dehydrogenase%2C len: 747aa%3B similar to many e.g. TR:O53648 (EMBL:AL021928) hypothetical protein from Mycobacterium tuberculosis (762 aa) fasta scores%3B opt: 617%2C z-score: 625.8%2C E(): 1.6e-27%2C (29.9%25 identity in 762 aa overlap) and SW:FDHF_ECOLI formate dehydrogenase from Escherichia coli (715 aa) fasta scores%3B opt: 466%2C z-score: 473.3%2C E(): 4.9e-19%2C (24.0%25 identity in 716 aa overlap).;gbkey=CDS;gene=SCI30A.32c;product=dehydrogenase;protein_id=NP_625985.1;transl_table=11
NC_003888.3	RefSeq	gene	1834289	1834906	.	-	.	ID=gene1709;Dbxref=GeneID:1097143;Name=SCI11.01c;gbkey=Gene;gene=SCI11.01c;gene_biotype=protein_coding;gene_synonym=SCI11.01c,SCI30A.33c;locus_tag=SCO1712
NC_003888.3	RefSeq	CDS	1834289	1834906	.	-	0	ID=cds1677;Parent=gene1709;Dbxref=Genbank:NP_733542.1,GeneID:1097143;Name=NP_733542.1;Note=SCI11.01c%2C possible tetR-family transcriptional regulator%2C partial CDS%2C len: >158 aa%3B weakly similar to many plasmid tetracycline repressor proteins e.g. SW:TER1_ECOLI (EMBL:X61367)%2C TetR%2C Escherichia coli plasmid RP1 (216 aa)%2C fasta scores%3B opt: 150 z-score: 196.6 E(): 0.0013%2C 32.8%25 identity in 122 aa overlap. Also similar to TR:O54102 (EMBL:AL021529) S.coelicolor transcriptional regulator (198 aa) (31.9%25 identity in 72 aa overlap). An alternative start codon is present at codon 4. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family~SCI30A.33c%2C partial CDS%2C unknown%2C len: >80 aa;gbkey=CDS;gene=SCI11.01c;product=TetR family transcriptional regulator;protein_id=NP_733542.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1834691	1834831	.	-	.	ID=id2220;Dbxref=GeneID:1097143;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 43.40%2C E-value 2.6e-10;gbkey=misc_feature;gene=SCI11.01c
NC_003888.3	RefSeq	gene	1834903	1835007	.	-	.	ID=gene1710;Dbxref=GeneID:1097144;Name=SCI11.02c;gbkey=Gene;gene=SCI11.02c;gene_biotype=protein_coding;gene_synonym=SCI11.02c;locus_tag=SCO1713
NC_003888.3	RefSeq	CDS	1834903	1835007	.	-	0	ID=cds1678;Parent=gene1710;Dbxref=Genbank:NP_625986.1,GeneID:1097144;Name=NP_625986.1;Note=SCI11.02c%2C hypothetical protein%2C len: 34 aa%3B unknown function%2C improbable CDS suggested by positions of start and stop codons;gbkey=CDS;gene=SCI11.02c;product=hypothetical protein;protein_id=NP_625986.1;transl_table=11
NC_003888.3	RefSeq	gene	1835004	1835573	.	-	.	ID=gene1711;Dbxref=GeneID:1097145;Name=SCI11.03c;gbkey=Gene;gene=SCI11.03c;gene_biotype=protein_coding;gene_synonym=SCI11.03c;locus_tag=SCO1714
NC_003888.3	RefSeq	CDS	1835004	1835573	.	-	0	ID=cds1679;Parent=gene1711;Dbxref=Genbank:NP_625987.1,GeneID:1097145;Name=NP_625987.1;Note=SCI11.03c%2C possible hypothetical protein%2C len: 189 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains a probable N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site%2C so may be a lipoprotein;gbkey=CDS;gene=SCI11.03c;product=hypothetical protein;protein_id=NP_625987.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1835502	1835534	.	-	.	ID=id2221;Dbxref=GeneID:1097145;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCI11.03c
NC_003888.3	RefSeq	gene	1835784	1837109	.	+	.	ID=gene1712;Dbxref=GeneID:1097146;Name=hgd;gbkey=Gene;gene=hgd;gene_biotype=protein_coding;gene_synonym=hgd,SCI11.04;locus_tag=SCO1715
NC_003888.3	RefSeq	CDS	1835784	1837109	.	+	0	ID=cds1680;Parent=gene1712;Dbxref=Genbank:NP_625988.1,GeneID:1097146;Name=NP_625988.1;Note=An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine;gbkey=CDS;gene=hgd;product=homogentisate 1%2C2-dioxygenase;protein_id=NP_625988.1;transl_table=11
NC_003888.3	RefSeq	gene	1837136	1837885	.	+	.	ID=gene1713;Dbxref=GeneID:1097147;Name=SCI11.05;gbkey=Gene;gene=SCI11.05;gene_biotype=protein_coding;gene_synonym=SCI11.05;locus_tag=SCO1716
NC_003888.3	RefSeq	CDS	1837136	1837885	.	+	0	ID=cds1681;Parent=gene1713;Dbxref=Genbank:NP_625989.1,GeneID:1097147;Name=NP_625989.1;Note=SCI11.05%2C possible gntR-family transcriptional regulator%2C len: 249 aa%3B weakly similar to many trancriptional regulators e.g. SW:FARR_ECOLI (EMBL:X15790)%2C FarR%2C Escherichia coli fatty acyl responsive regulator (240 aa)%2C fasta scores%3B opt: 213 z-score: 265.9 E(): 1.8e-07%2C 25.0%25 identity in 232 aa overlap. Similar to others from S.coelicolor e.g. SCE39.14c (EMBL:AL049573) S.coelicolor possible gntR-family regulator (243 aa) (29.5%25 identity in 224 aa overlap). Contains probable helix-turn-helix motif at aa 42-63 (Score 1296%2C +3.60 SD). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCI11.05;product=GntR family transcriptional regulator;protein_id=NP_625989.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1837196	1837375	.	+	.	ID=id2222;Dbxref=GeneID:1097147;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 46.40%2C E-value 9.1e-13;gbkey=misc_feature;gene=SCI11.05
NC_003888.3	RefSeq	gene	1837893	1839068	.	+	.	ID=gene1714;Dbxref=GeneID:1097148;Name=SCI11.06;gbkey=Gene;gene=SCI11.06;gene_biotype=protein_coding;gene_synonym=SCI11.06;locus_tag=SCO1717
NC_003888.3	RefSeq	CDS	1837893	1839068	.	+	0	ID=cds1682;Parent=gene1714;Dbxref=Genbank:NP_625990.1,GeneID:1097148;Name=NP_625990.1;Note=SCI11.06%2C hypothetical protein%2C len: 391 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCI11.06;product=hypothetical protein;protein_id=NP_625990.1;transl_table=11
NC_003888.3	RefSeq	gene	1839094	1839798	.	-	.	ID=gene1715;Dbxref=GeneID:1097149;Name=SCI11.07c;gbkey=Gene;gene=SCI11.07c;gene_biotype=protein_coding;gene_synonym=SCI11.07c;locus_tag=SCO1718
NC_003888.3	RefSeq	CDS	1839094	1839798	.	-	0	ID=cds1683;Parent=gene1715;Dbxref=Genbank:NP_625991.1,GeneID:1097149;Name=NP_625991.1;Note=SCI11.07c%2C possible regulator%2C len: 234 aa%3B similar to transcriptional regulators e.g. TR:O52558 (EMBL:AF040570)%2C RifQ%2C Amycolatopsis mediterranei repressor in rafamycin biosynthetic cluster (242 aa)%2C fasta scores%3B opt: 325 z-score: 405.5 E(): 3e-15%2C 33.6%25 identity in 229 aa overlap. Similar to others from S.coelicolor e.g. SCI30A.23 S.coelicolor possible transcriptional regulator (213 aa) (30.7%25 identity in 218 aa overlap);gbkey=CDS;gene=SCI11.07c;product=regulator;protein_id=NP_625991.1;transl_table=11
NC_003888.3	RefSeq	gene	1839862	1840860	.	+	.	ID=gene1716;Dbxref=GeneID:1097150;Name=SCI11.08;gbkey=Gene;gene=SCI11.08;gene_biotype=protein_coding;gene_synonym=SCI11.08;locus_tag=SCO1719
NC_003888.3	RefSeq	CDS	1839862	1840860	.	+	0	ID=cds1684;Parent=gene1716;Dbxref=Genbank:NP_625992.1,GeneID:1097150;Name=NP_625992.1;Note=SCI11.08%2C possible ABC-transporter ATP-binding protein%2C len: 332 aa%3B similar to members of the ABC-transporter superfamily e.g. SW:DRRA_STRPE (EMBL:M73758)%2C drrA%2C Streptomyces peucetius daunorubicin resistance ATP-binding protein (330 aa)%2C fasta scores%3B opt: 901 z-score: 964.0 E(): 0%2C 50.6%25 identity in 316 aa overlap. Similar to many from S.coelicolor e.g. SCE9.25c (EMBL:AL049841) S.coelicolor probable ABC transporter ATP-binding component (315 aa) (57.1%25 identity in 308 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI11.08;product=ABC transporter ATP-binding protein;protein_id=NP_625992.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1839955	1840494	.	+	.	ID=id2223;Dbxref=GeneID:1097150;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 185.30%2C E-value 9.5e-52;gbkey=misc_feature;gene=SCI11.08
NC_003888.3	RefSeq	repeat_region	1839974	1840004	.	+	.	ID=id2224;Dbxref=GeneID:1097150;Note=repeat 1%3B degenerate 31 bp direct repeat;gbkey=repeat_region;gene=SCI11.08
NC_003888.3	RefSeq	sequence_feature	1839976	1839999	.	+	.	ID=id2225;Dbxref=GeneID:1097150;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI11.08
NC_003888.3	RefSeq	repeat_region	1840204	1840497	.	+	.	ID=id2226;Dbxref=GeneID:1097150;Note=repeat 2%3B highly degenerate 294 bp direct repeat;gbkey=repeat_region;gene=SCI11.08
NC_003888.3	RefSeq	gene	1840857	1841672	.	+	.	ID=gene1717;Dbxref=GeneID:1097151;Name=SCI11.09;gbkey=Gene;gene=SCI11.09;gene_biotype=protein_coding;gene_synonym=SCI11.09;locus_tag=SCO1720
NC_003888.3	RefSeq	CDS	1840857	1841672	.	+	0	ID=cds1685;Parent=gene1717;Dbxref=Genbank:NP_625993.1,GeneID:1097151;Name=NP_625993.1;Note=SCI11.09%2C possible ABC-transporter transmembrane protein%2C len: 271 aa%3B similar to transmembrane subunits of members of the ABC-transporter superfamily e.g SW:DRRB_STRPE (EMBL:M73758)%2C drrB%2C Streptomyces peucetius daunorubicin resistance transmembrane protein (283 aa)%2C fasta scores%3B opt: 467 z-score: 550.2 E(): 2.6e-23%2C 34.0%25 identity in 244 aa overlap. Similar to many others from S.coelicolor e.g. SCE9.24c (EMBL:AL049841) S.coelicolor probable ABC transporter transmembrane component (260 aa) (41.8%25 identity in 268 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCI11.09;product=ABC-transporter transmembrane protein;protein_id=NP_625993.1;transl_table=11
NC_003888.3	RefSeq	gene	1841897	1842166	.	-	.	ID=gene1718;Dbxref=GeneID:1097152;Name=SCI11.10c;gbkey=Gene;gene=SCI11.10c;gene_biotype=protein_coding;gene_synonym=SCI11.10c;locus_tag=SCO1721
NC_003888.3	RefSeq	CDS	1841897	1842166	.	-	0	ID=cds1686;Parent=gene1718;Dbxref=Genbank:NP_625994.1,GeneID:1097152;Name=NP_625994.1;Note=SCI11.10c%2C hypothetical protein%2C len: 89 aa%3B unknown function%2C possible CDS suggested by GC frameplot;gbkey=CDS;gene=SCI11.10c;product=hypothetical protein;protein_id=NP_625994.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1842171	1842174	.	-	.	ID=id2227;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	1842282	1843034	.	-	.	ID=gene1719;Dbxref=GeneID:1097153;Name=SCI11.11c;gbkey=Gene;gene=SCI11.11c;gene_biotype=protein_coding;gene_synonym=SCI11.11c;locus_tag=SCO1722
NC_003888.3	RefSeq	CDS	1842282	1843034	.	-	0	ID=cds1687;Parent=gene1719;Dbxref=Genbank:NP_625995.1,GeneID:1097153;Name=NP_625995.1;Note=SCI11.11c%2C possible membrane protein%2C len: 250 aa%3B unknown function%2C similar%2C except at the N-terminus%2C to SW:Y24K_STRGR (EMBL:X15060) Streptomyces griseus hypothetical protein (238 aa)%2C fasta scores%3B opt: 274 z-score: 308.4 E(): 7.6e-10%2C 33.0%25 identity in 176 aa overlap. Also similar to TR:O53729 (EMBL:AL021932) mycobacterium tuberculosis hypothetical protein (232 aa) (31.1%25 identity in 241 aa overlap). Contains a hydrophobic%2C possible membrane-spanning region;gbkey=CDS;gene=SCI11.11c;product=hypothetical protein;protein_id=NP_625995.1;transl_table=11
NC_003888.3	RefSeq	gene	1843031	1843588	.	-	.	ID=gene1720;Dbxref=GeneID:1097154;Name=SCI11.12c;gbkey=Gene;gene=SCI11.12c;gene_biotype=protein_coding;gene_synonym=SCI11.12c;locus_tag=SCO1723
NC_003888.3	RefSeq	CDS	1843031	1843588	.	-	0	ID=cds1688;Parent=gene1720;Dbxref=Genbank:NP_625996.1,GeneID:1097154;Name=NP_625996.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B in M. bovis this protein has been shown to be involved in expression of antigenic proteins;gbkey=CDS;gene=SCI11.12c;product=RNA polymerase sigma factor SigK;protein_id=NP_625996.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1843277	1843483	.	-	.	ID=id2228;Dbxref=GeneID:1097154;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 31.20%2C E-value 2.4e-05;gbkey=misc_feature;gene=SCI11.12c
NC_003888.3	RefSeq	gene	1843788	1845440	.	+	.	ID=gene1721;Dbxref=GeneID:1097155;Name=SCI11.13;gbkey=Gene;gene=SCI11.13;gene_biotype=protein_coding;gene_synonym=SCI11.13;locus_tag=SCO1724
NC_003888.3	RefSeq	CDS	1843788	1845440	.	+	0	ID=cds1689;Parent=gene1721;Dbxref=Genbank:NP_625997.1,GeneID:1097155;Name=NP_625997.1;Note=SCI11.13%2C probable Ser/Thr protein kinase%2C len: 550 aa%3B similar to eukaryotic-type protein kinases e.g. SW:PKAA_STRCO (EMBL:D86821)%2C PkaA%2C Streptomyces coelicolor Ser/Thr protein kinase (543 aa)%2C fasta scores%3B opt: 628 z-score: 420.3 E(): 4.4e-16%2C 39.0%25 identity in 364 aa overlap%2C but divergent at C-terminus. Similar to many  Ser/Thr protein kinases e.g. TR:O83032 (EMBL:AB016932)%2C PkaD%2C S.coelicolor Ser/Thr protein kinase (598 aa) (49.5%25 identity in 444 aa overlap). Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C PS00108 Ser/Thr protein kinases active-site signature and PS00107 Protein kinases ATP-binding region signature;gbkey=CDS;gene=SCI11.13;product=Ser/Thr protein kinase;protein_id=NP_625997.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1843830	1844582	.	+	.	ID=id2229;Dbxref=GeneID:1097155;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 205.40%2C E-value 8.7e-58;gbkey=misc_feature;gene=SCI11.13
NC_003888.3	RefSeq	sequence_feature	1843848	1843919	.	+	.	ID=id2230;Dbxref=GeneID:1097155;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCI11.13
NC_003888.3	RefSeq	sequence_feature	1844199	1844237	.	+	.	ID=id2231;Dbxref=GeneID:1097155;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SCI11.13
NC_003888.3	RefSeq	gene	1845443	1846249	.	-	.	ID=gene1722;Dbxref=GeneID:1097156;Name=SCI11.14c;gbkey=Gene;gene=SCI11.14c;gene_biotype=protein_coding;gene_synonym=SCI11.14c;locus_tag=SCO1725
NC_003888.3	RefSeq	CDS	1845443	1846249	.	-	0	ID=cds1690;Parent=gene1722;Dbxref=Genbank:NP_625998.1,GeneID:1097156;Name=NP_625998.1;Note=SCI11.14c%2C possible  hydrolase%2C len: 268 aa%3B similar to TR:Q59837 (EMBL:X92765)%2C estA%2C Streptomyces diastatochromogenes esterase A (326 aa)%2C fasta scores%3B opt: 147 z-score: 171.2 E(): 0.033%2C 26.8%25 identity in 314 aa overlap. The difference in length is accounted for by internal deletions in this protein%2C relative to TR:Q59837. The  active-site serine motif GDSYT in the S.diastatochromogenes enzyme is conserved in this protein. Contains a probable N-terminal signal sequence;gbkey=CDS;gene=SCI11.14c;product=hydrolase;protein_id=NP_625998.1;transl_table=11
NC_003888.3	RefSeq	gene	1846435	1847529	.	+	.	ID=gene1723;Dbxref=GeneID:1097157;Name=SCI11.15;gbkey=Gene;gene=SCI11.15;gene_biotype=protein_coding;gene_synonym=SCI11.15;locus_tag=SCO1726
NC_003888.3	RefSeq	CDS	1846435	1847529	.	+	0	ID=cds1691;Parent=gene1723;Dbxref=Genbank:NP_625999.1,GeneID:1097157;Name=NP_625999.1;Note=SCI11.15%2C possible ATPase%2C len: 364 aa%3B unknown function%2C very weak similarity to eukaryotic ATPases e.g. TR:P78787 (EMBL:D89136) Schizosaccharomyces pombe ATPase (partial CDS) (419 aa)%2C fasta scores%3B opt: 184 z-score: 216.6 E(): 9.9e-05%2C 26.5%25 identity in 309 aa overlap and to part of SW:AFG2_YEAST (EMBL:L14615)%2C Agf2%2C Saccharomyces cerevisiae ATPase essential for viability (780 aa) (29.9%25 identity in 137 aa overlap). Contains weak Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA) and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI11.15;product=ATPase;protein_id=NP_625999.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1846975	1847490	.	+	.	ID=id2232;Dbxref=GeneID:1097157;Note=Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA)%2C score -8.90%2C E-value 0.00013;gbkey=misc_feature;gene=SCI11.15
NC_003888.3	RefSeq	sequence_feature	1846990	1847013	.	+	.	ID=id2233;Dbxref=GeneID:1097157;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI11.15
NC_003888.3	RefSeq	gene	1847564	1848331	.	+	.	ID=gene1724;Dbxref=GeneID:1097158;Name=SCI11.16;gbkey=Gene;gene=SCI11.16;gene_biotype=protein_coding;gene_synonym=SCI11.16;locus_tag=SCO1727
NC_003888.3	RefSeq	CDS	1847564	1848331	.	+	0	ID=cds1692;Parent=gene1724;Dbxref=Genbank:NP_626000.1,GeneID:1097158;Name=NP_626000.1;Note=SCI11.16%2C conserved hypothetical protein%2C len: 255 aa%3B unknown function%2C similar hypothetical proteins e.g. TR:O67070 (EMBL:AE000714) Aquifex aeolicus hypothetical protein (252 aa)%2C fasta scores%3B opt: 459 z-score: 574.9 E(): 1.1e-24%2C 33.0%25 identity in 230 aa overlap and the N-terminal half of SW:YECE_ECOLI (EMBL:AE000280) Escherichia coli hypothetical protein (272 aa) (29.0%25 identity in 155 aa overlap). Similar to TR:Q9ZBF5 (EMBL:AL035206) S. coelicolor hypothetical protein (292 aa) (32.2%25 identity in 283 aa overlap);gbkey=CDS;gene=SCI11.16;product=hypothetical protein;protein_id=NP_626000.1;transl_table=11
NC_003888.3	RefSeq	gene	1848412	1848816	.	-	.	ID=gene1725;Dbxref=GeneID:1097159;Name=SCI11.17c;gbkey=Gene;gene=SCI11.17c;gene_biotype=protein_coding;gene_synonym=SCI11.17c;locus_tag=SCO1728
NC_003888.3	RefSeq	CDS	1848412	1848816	.	-	0	ID=cds1693;Parent=gene1725;Dbxref=Genbank:NP_626001.1,GeneID:1097159;Name=NP_626001.1;Note=SCI11.17c%2C possible gntR-family transcriptional regulator%2C len: 134 aa%3B weakly similar to the N-terminal half of SW:HUTC_PSEPU (EMBL:M33922)%2C HutC%2C Pseudomonas putida histidine utilization repressor (248 aa)%2C fasta scores%3B opt: 164 z-score: 202.7 E(): 0.00059%2C 33.9%25 identity in 109 aa overlap. Similar to many transcriptional regulators e.g. SCGD3.13 (EMBL:AL096822) S.coelicolor probable gntR-family transcriptional regulator (115 aa) (32.4%25 identity in 111 aa overlap) and to TR:O06550 (EMBL:Z95584) Mycobacterium tuberculosis hypothetical protein (121 aa) (50.0%25 identity in 106 aa overlap). Contains probable helix-turn-helix motif at aa 106-127 (Score 1082%2C +2.87 SD). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCI11.17c;product=GntR family transcriptional regulator;protein_id=NP_626001.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1848550	1848729	.	-	.	ID=id2234;Dbxref=GeneID:1097159;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 56.00%2C E-value 9.1e-16;gbkey=misc_feature;gene=SCI11.17c
NC_003888.3	RefSeq	gene	1848849	1849775	.	+	.	ID=gene1726;Dbxref=GeneID:1097160;Name=SCI11.18;gbkey=Gene;gene=SCI11.18;gene_biotype=protein_coding;gene_synonym=SCI11.18;locus_tag=SCO1729
NC_003888.3	RefSeq	CDS	1848849	1849775	.	+	0	ID=cds1694;Parent=gene1726;Dbxref=Genbank:NP_626002.1,GeneID:1097160;Name=NP_626002.1;Note=SCI11.18%2C hypothetical protein%2C len: 308 aa%3B unknown function%2C N-terminal half weakly similar to parts of other hypothetical proteins e.g. TR:O32075 (EMBL:Z99119) Bacillus subtilis hypothetical protein (173 aa)%2C fasta scores%3B opt: 148 z-score: 187.8 E(): 0.004%2C 28.0%25 identity in 168 aa overlap. Weakly similar to TR:Q9ZBG7 (EMBL:AL035206) S.coelicolor hypothetical protein (319 aa) (30.1%25 identity in 272 aa overlap). Contains weak Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCI11.18;product=hypothetical protein;protein_id=NP_626002.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1848870	1849250	.	+	.	ID=id2235;Dbxref=GeneID:1097160;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 26.70%2C E-value 0.00055;gbkey=misc_feature;gene=SCI11.18
NC_003888.3	RefSeq	ribosome_entry_site	1849745	1849749	.	+	.	ID=id2236;Dbxref=GeneID:1097160;Note=possible RBS;gbkey=RBS;gene=SCI11.18
NC_003888.3	RefSeq	gene	1849756	1850256	.	+	.	ID=gene1727;Dbxref=GeneID:1097161;Name=SCI11.19;gbkey=Gene;gene=SCI11.19;gene_biotype=protein_coding;gene_synonym=SCI11.19;locus_tag=SCO1730
NC_003888.3	RefSeq	CDS	1849756	1850256	.	+	0	ID=cds1695;Parent=gene1727;Dbxref=Genbank:NP_626003.1,GeneID:1097161;Name=NP_626003.1;Note=SCI11.19%2C hypothetical protein%2C len: 166 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Overlaps the upstream CDS by 6 codons;gbkey=CDS;gene=SCI11.19;product=hypothetical protein;protein_id=NP_626003.1;transl_table=11
NC_003888.3	RefSeq	gene	1850270	1850887	.	-	.	ID=gene1728;Dbxref=GeneID:1097162;Name=SCI11.20c;gbkey=Gene;gene=SCI11.20c;gene_biotype=protein_coding;gene_synonym=SCI11.20c;locus_tag=SCO1731
NC_003888.3	RefSeq	CDS	1850270	1850887	.	-	0	ID=cds1696;Parent=gene1728;Dbxref=Genbank:NP_626004.1,GeneID:1097162;Name=NP_626004.1;Note=SCI11.20c%2C hypothetical protein%2C len: 205 aa%3B weakly similar to parts of many hypothetical proteins%2C many of which resemble methyltransferases e.g. TR:Q48938 (EMBL:X93084) Methanosarcina barkeri ORF3 from molybdenum formylmethanofuran dehydrogenase cluster (262 aa)%2C fasta scores%3B opt: 445 z-score: 518.9 E(): 1.4e-21%2C 37.8%25 identity in 193 aa overlap. Weak similarity to many others from S.coelicolor e.g. TR:Q9ZC03 (EMBL:AL033505) S.coelicolor hypothetical protein (273 aa) (35.2%25 identity in 142 aa overlap);gbkey=CDS;gene=SCI11.20c;product=hypothetical protein;protein_id=NP_626004.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1851028	1851033	.	+	.	ID=id2237;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	1851039	1851173	.	+	.	ID=gene1729;Dbxref=GeneID:1097163;Name=SCI11.21;gbkey=Gene;gene=SCI11.21;gene_biotype=protein_coding;gene_synonym=SCI11.21;locus_tag=SCO1732
NC_003888.3	RefSeq	CDS	1851039	1851173	.	+	0	ID=cds1697;Parent=gene1729;Dbxref=Genbank:NP_626005.1,GeneID:1097163;Name=NP_626005.1;Note=SCI11.21%2C hypothetical protein%2C len: 44 aa%3B unknown function%2C possible CDS suggested by GC frameplot and the presence of a possible RBS;gbkey=CDS;gene=SCI11.21;product=hypothetical protein;protein_id=NP_626005.1;transl_table=11
NC_003888.3	RefSeq	gene	1851199	1851669	.	-	.	ID=gene1730;Dbxref=GeneID:1097164;Name=SCI11.22c;gbkey=Gene;gene=SCI11.22c;gene_biotype=protein_coding;gene_synonym=SCI11.22c;locus_tag=SCO1733
NC_003888.3	RefSeq	CDS	1851199	1851669	.	-	0	ID=cds1698;Parent=gene1730;Dbxref=Genbank:NP_626006.1,GeneID:1097164;Name=NP_626006.1;Note=SCI11.22c%2C possible acetyltransferase%2C len: 156 aa%3B unknown function%2C weakly similar to TR:Q51670 (EMBL:U34346) Paracoccus denitrificans hypothetical protein (173 aa)%2C fasta scores%3B opt: 144 z-score: 184.8 E(): 0.0058%2C 28.9%25 identity in 149 aa overlap. Very weak similarity to some acetyltransferases e.g. SW:IAAT_AZOBR (EMBL:X57853) Azospirillum brasilense IAA acetyltransferase (153 aa) (26.1%25 identity in 111 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCI11.22c;product=acetyltransferase;protein_id=NP_626006.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1851265	1851654	.	-	.	ID=id2238;Dbxref=GeneID:1097164;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 44.20%2C E-value 2.9e-09;gbkey=misc_feature;gene=SCI11.22c
NC_003888.3	RefSeq	gene	1851848	1852918	.	+	.	ID=gene1731;Dbxref=GeneID:1097165;Name=SCI11.23;gbkey=Gene;gene=SCI11.23;gene_biotype=protein_coding;gene_synonym=SCI11.23;locus_tag=SCO1734
NC_003888.3	RefSeq	CDS	1851848	1852918	.	+	0	ID=cds1699;Parent=gene1731;Dbxref=Genbank:NP_626007.1,GeneID:1097165;Name=NP_626007.1;Note=SCI11.23%2C possible  cellulose-binding protein%2C len: 356 aa%3B similar cellulose-binding proteins e.g. TR:O07862 (EMBL:U51222) Streptomyces halstedii cellulose-binding protein (364 aa)%2C fasta scores%3B opt: 584 z-score: 557.4 E(): 1e-23%2C 35.7%25 identity in 305 aa overlap. Weaker similarity to chitin-binding proteins e.g. TR:O87962 (EMBL:Y14315) Streptomyces reticuli chitin-binding protein (201 aa) (32.7%25 identity in 214 aa overlap)  when co-cultivated with chitin-containing fungi. Weak similarity to TR:O86614 (EMBL:AL031155) S.coelicolor possible  chitinase (252 aa) (28.9%25 identity in 266 aa overlap). Contains a probable N-terminal signal sequence%2Ca possible hydrophobic membrane spanning region at the C-terminal domain and 6x G(D/S) repeats starting at codon 215;gbkey=CDS;gene=SCI11.23;product=cellulose-binding protein;protein_id=NP_626007.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1852490	1852531	.	+	.	ID=id2239;Dbxref=GeneID:1097165;Note=6x degenerate 6 bp repeats;gbkey=repeat_region;gene=SCI11.23
NC_003888.3	RefSeq	gene	1853026	1853898	.	-	.	ID=gene1732;Dbxref=GeneID:1097166;Name=SCI11.24c;gbkey=Gene;gene=SCI11.24c;gene_biotype=protein_coding;gene_synonym=SCI11.24c;locus_tag=SCO1735
NC_003888.3	RefSeq	CDS	1853026	1853898	.	-	0	ID=cds1700;Parent=gene1732;Dbxref=Genbank:NP_626008.1,GeneID:1097166;Name=NP_626008.1;Note=SCI11.24c%2C probable  lipase%2C len: 290 aa%3B similar to many lipases e.g. TR:O33969 (EMBL:U80063)%2C lipA%2C Streptomyces cinnamoneus lipase (275 aa)%2C fasta scores%3B opt: 575 z-score: 653.1 E(): 4.8e-29%2C 47.6%25 identity in 254 aa overlap. Contains probable N-terminal signal sequence;gbkey=CDS;gene=SCI11.24c;product=lipase;protein_id=NP_626008.1;transl_table=11
NC_003888.3	RefSeq	gene	1854078	1854524	.	-	.	ID=gene1733;Dbxref=GeneID:1097167;Name=SCI11.25c;gbkey=Gene;gene=SCI11.25c;gene_biotype=protein_coding;gene_synonym=SCI11.25c;locus_tag=SCO1736
NC_003888.3	RefSeq	CDS	1854078	1854524	.	-	0	ID=cds1701;Parent=gene1733;Dbxref=Genbank:NP_626009.1,GeneID:1097167;Name=NP_626009.1;Note=SCI11.25c%2C possible marR-family transcriptional regulator%2C len: 148 aa%3B weakly similar to hypothetical proteins e.g. SW:YW06_MYCTU (EMBL:Z74025) Mycobacterium tuberculosis hypothetical protein (143 aa)%2C fasta scores%3B opt: 159 z-score: 204.1 E(): 0.00049%2C 31.9%25 identity in 135 aa overlap. An alternative start codon is present at codon 7. Contains probable helix-turn-helix motif at aa 53-74 (Score 1261%2C +3.48 SD). Contains Pfam match to entry PF01047 MarR%2C MarR family. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI11.25c;product=MarR family transcriptional regulator;protein_id=NP_626009.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1854111	1854419	.	-	.	ID=id2240;Dbxref=GeneID:1097167;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 25.70%2C E-value 8.8e-05;gbkey=misc_feature;gene=SCI11.25c
NC_003888.3	RefSeq	gene	1854635	1855009	.	+	.	ID=gene1734;Dbxref=GeneID:1097168;Name=SCI11.26;gbkey=Gene;gene=SCI11.26;gene_biotype=protein_coding;gene_synonym=SCI11.26;locus_tag=SCO1737
NC_003888.3	RefSeq	CDS	1854635	1855009	.	+	0	ID=cds1702;Parent=gene1734;Dbxref=Genbank:NP_626010.1,GeneID:1097168;Name=NP_626010.1;Note=SCI11.26%2C hypothetical protein%2C len: 124 aa%3B unknown function%2C similar to TR:O86372 (EMBL:AL022003) Mycobacterium tuberculosis hypothetical protein (116 aa)%2C fasta scores%3B opt: 129 z-score: 177.0 E(): 0.016%2C 34.7%25 identity in 98 aa overlap;gbkey=CDS;gene=SCI11.26;product=hypothetical protein;protein_id=NP_626010.1;transl_table=11
NC_003888.3	RefSeq	gene	1855022	1855990	.	-	.	ID=gene1735;Dbxref=GeneID:1097169;Name=SCI11.27c;gbkey=Gene;gene=SCI11.27c;gene_biotype=protein_coding;gene_synonym=SCI11.27c;locus_tag=SCO1738
NC_003888.3	RefSeq	CDS	1855022	1855990	.	-	0	ID=cds1703;Parent=gene1735;Dbxref=Genbank:NP_626011.1,GeneID:1097169;Name=NP_626011.1;Note=SCI11.27c%2C conserved hypothetical protein%2C len: 322 aa%3B similar to many hypothetical proteins related to the impB/mucB/samB family e.g. TR:Q10787 (EMBL:Z74020) Mycobacterium tuberculosis hypothetical protein (463 aa)%2C fasta scores%3B opt: 330 z-score: 372.5 E(): 2.1e-13%2C 29.5%25 identity in 281 aa overlap;gbkey=CDS;gene=SCI11.27c;product=hypothetical protein;protein_id=NP_626011.1;transl_table=11
NC_003888.3	RefSeq	gene	1855987	1859544	.	-	.	ID=gene1736;Dbxref=GeneID:1097170;Name=SCI11.28c;gbkey=Gene;gene=SCI11.28c;gene_biotype=protein_coding;gene_synonym=SCI11.28c;locus_tag=SCO1739
NC_003888.3	RefSeq	CDS	1855987	1859544	.	-	0	ID=cds1704;Parent=gene1736;Dbxref=Genbank:NP_626012.1,GeneID:1097170;Name=NP_626012.1;Note=SCI11.28c%2C probable DNA polymerase III%2C alpha chain%2C len: 1185 aa%3B similar to many e.g. SW:DP3A_ECOLI (EMBL:M19334)%2C dnaE%2C Escherichia coli DNA polymerase III%2C alpha chain (1160 aa)%2C fasta scores%3B opt: 1177 z-score: 1220.7 E(): 0%2C 28.4%25 identity in 1135 aa overlap;gbkey=CDS;gene=SCI11.28c;product=DNA polymerase III subunit alpha;protein_id=NP_626012.1;transl_table=11
NC_003888.3	RefSeq	gene	1859718	1860782	.	+	.	ID=gene1737;Dbxref=GeneID:1097171;Name=SCI11.29;gbkey=Gene;gene=SCI11.29;gene_biotype=protein_coding;gene_synonym=SCI11.29;locus_tag=SCO1740
NC_003888.3	RefSeq	CDS	1859718	1860782	.	+	0	ID=cds1705;Parent=gene1737;Dbxref=Genbank:NP_626013.1,GeneID:1097171;Name=NP_626013.1;Note=SCI11.29%2C possible membrane protein%2C len: 354 aa%3B unknown function%2C weakly similar to TR:O07424 (EMBL:Z97050) Mycobacterium tuberculosis possible membrane protein (452 aa)%2C fasta scores%3B opt: 190 z-score: 202.3 E(): 0.00062%2C 25.9%25 identity in 409 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCI11.29;product=hypothetical protein;protein_id=NP_626013.1;transl_table=11
NC_003888.3	RefSeq	gene	1860897	1861979	.	-	.	ID=gene1738;Dbxref=GeneID:1097172;Name=SCI11.30c;gbkey=Gene;gene=SCI11.30c;gene_biotype=protein_coding;gene_synonym=SCI11.30c;locus_tag=SCO1741
NC_003888.3	RefSeq	CDS	1860897	1861979	.	-	0	ID=cds1706;Parent=gene1738;Dbxref=Genbank:NP_626014.1,GeneID:1097172;Name=NP_626014.1;Note=SCI11.30c%2C probable  serine protease%2C len: 360 aa%3B highly similar to many serine proteases e.g. SW:PRTD_STRGR (EMBL:L29019)%2C sprD%2C Streptomyces griseus serine protease D precursor (392 aa)%2C fasta scores%3B opt: 1703 z-score: 1655.9 E(): 0%2C 67.1%25 identity in 392 aa overlap. Similar to S.coelicolor SCI11.35c%2C sal%2C  serine protease (300 aa) (52.2%25 identity in 278 aa overlap). Contains a probable N-terminal signal sequence. Contains probable coiled-coil from 84 to 119 (36 residues) (Max score: 1.468%2C probability 0.91). Contains Pfam match to entry PF00089 trypsin%2C Trypsin%2C PS00134 Serine proteases%2C trypsin family%2C histidine active site and PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=CDS;gene=SCI11.30c;product=serine protease;protein_id=NP_626014.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1860915	1861460	.	-	.	ID=id2241;Dbxref=GeneID:1097172;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 4.90%2C E-value 5.1e-05;gbkey=misc_feature;gene=SCI11.30c
NC_003888.3	RefSeq	repeat_region	1860924	1860999	.	-	.	ID=id2242;Dbxref=GeneID:1097172;Note=repeat 3%3B degenerate 76 bp direct repeat;gbkey=repeat_region;gene=SCI11.30c
NC_003888.3	RefSeq	sequence_feature	1861017	1861052	.	-	.	ID=id2243;Dbxref=GeneID:1097172;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=misc_feature;gene=SCI11.30c
NC_003888.3	RefSeq	repeat_region	1861019	1861155	.	-	.	ID=id2244;Dbxref=GeneID:1097172;Note=repeat 4%3B degenerate 137 bp direct repeat;gbkey=repeat_region;gene=SCI11.30c
NC_003888.3	RefSeq	repeat_region	1861256	1861325	.	-	.	ID=id2245;Dbxref=GeneID:1097172;Note=repeat 5%3B degenerate 70 bp direct repeat;gbkey=repeat_region;gene=SCI11.30c
NC_003888.3	RefSeq	repeat_region	1861354	1861400	.	-	.	ID=id2246;Dbxref=GeneID:1097172;Note=repeat 6%3B degenerate 47 bp direct repeat;gbkey=repeat_region;gene=SCI11.30c
NC_003888.3	RefSeq	sequence_feature	1861359	1861376	.	-	.	ID=id2247;Dbxref=GeneID:1097172;Note=PS00134 Serine proteases%2C trypsin family%2C histidine active site;gbkey=misc_feature;gene=SCI11.30c
NC_003888.3	RefSeq	repeat_region	1861402	1861462	.	-	.	ID=id2248;Dbxref=GeneID:1097172;Note=repeat 7%3B degenerate 61 bp direct repeat;gbkey=repeat_region;gene=SCI11.30c
NC_003888.3	RefSeq	repeat_region	1861533	1861573	.	-	.	ID=id2249;Dbxref=GeneID:1097172;Note=repeat 8%3B degenerate 41 bp direct repeat;gbkey=repeat_region;gene=SCI11.30c
NC_003888.3	RefSeq	ribosome_entry_site	1861987	1861992	.	-	.	ID=id2250;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	1862249	1863169	.	+	.	ID=gene1739;Dbxref=GeneID:1097173;Name=SCI11.31;gbkey=Gene;gene=SCI11.31;gene_biotype=protein_coding;gene_synonym=SCI11.31;locus_tag=SCO1742
NC_003888.3	RefSeq	CDS	1862249	1863169	.	+	0	ID=cds1707;Parent=gene1739;Dbxref=Genbank:NP_626015.1,GeneID:1097173;Name=NP_626015.1;Note=SCI11.31%2C probable ABC-transporter ATP-binding protein%2C len: 319 aa%3B similar to SW:BCRA_BACLI (EMBL:L20573)%2C bcrA%2C Bacillus licheniformis bacitracin transport ATP-binding protein (306 aa)%2C fasta scores%3B opt: 561 z-score: 595.7 E(): 7.5e-26%2C 36.2%25 identity in 298 aa overlap and to many ABC-transporter ATP-binding proteins. Similar to others from S.coelicolor e.g. SCE8.17C (EMBL:AL035654) S.coelicolor probable ABC transporter ATP-binding protein (317 aa) (45.9%25 identity in 296 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI11.31;product=ABC transporter ATP-binding protein;protein_id=NP_626015.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1862360	1862890	.	+	.	ID=id2251;Dbxref=GeneID:1097173;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 147.30%2C E-value 2.7e-40;gbkey=misc_feature;gene=SCI11.31
NC_003888.3	RefSeq	repeat_region	1862379	1862409	.	+	.	ID=id2252;Dbxref=GeneID:1097173;Note=repeat 1%3B degenerate 31 bp direct repeat;gbkey=repeat_region;gene=SCI11.31
NC_003888.3	RefSeq	sequence_feature	1862381	1862404	.	+	.	ID=id2253;Dbxref=GeneID:1097173;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI11.31
NC_003888.3	RefSeq	repeat_region	1862600	1862893	.	+	.	ID=id2254;Dbxref=GeneID:1097173;Note=repeat 2%3B highly degenerate 294 bp direct repeat;gbkey=repeat_region;gene=SCI11.31
NC_003888.3	RefSeq	gene	1863166	1863885	.	+	.	ID=gene1740;Dbxref=GeneID:1097174;Name=SCI11.32;gbkey=Gene;gene=SCI11.32;gene_biotype=protein_coding;gene_synonym=SCI11.32;locus_tag=SCO1743
NC_003888.3	RefSeq	CDS	1863166	1863885	.	+	0	ID=cds1708;Parent=gene1740;Dbxref=Genbank:NP_626016.1,GeneID:1097174;Name=NP_626016.1;Note=SCI11.32%2C possible ABC-transporter transmembrane protein%2C len: 239 aa%3B weakly similar to ABC-transporter from S.coelicolor TR:O69995 (EMBL:AL022374) S.coelicolor probable ABC transporter (744 aa)%2C fasta scores%3B opt: 197 z-score: 224.6 E(): 3.5e-05%2C 35.4%25 identity in 212 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions. May be associated with the adjacent ABC-transporter ATP-binding protein;gbkey=CDS;gene=SCI11.32;product=ABC-transporter transmembrane protein;protein_id=NP_626016.1;transl_table=11
NC_003888.3	RefSeq	gene	1863882	1865048	.	+	.	ID=gene1741;Dbxref=GeneID:1097175;Name=SCI11.33;gbkey=Gene;gene=SCI11.33;gene_biotype=protein_coding;gene_synonym=SCI11.33;locus_tag=SCO1744
NC_003888.3	RefSeq	CDS	1863882	1865048	.	+	0	ID=cds1709;Parent=gene1741;Dbxref=Genbank:NP_626017.1,GeneID:1097175;Name=NP_626017.1;Note=SCI11.33%2C possible two-component system sensor kinase%2C len: 388 aa%3B similar to may sensor kinases e.g. to the N-terminus of TR:Q53893 (EMBL:AL035654)%2C AbsA1%2C S.coelicolor two-component system sensor kinase involved in global regulation of antibiotic synthesis (571 aa)%2C fasta scores%3B opt: 361 z-score: 391.6 E(): 1.8e-14%2C 31.6%25 identity in 364 aa overlap. The C-terminus is similar to part of SW:NARX_ECOLI (EMBL:X13360)%2C NarX%2C NarR%2C Escherichia coli nitrate/nitrite sensor protein (598 aa) (30.7%25 identity in 218 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains probable coiled-coil from 157 to 189 (33 residues) (Max score: 1.493%2C probability 0.94);gbkey=CDS;gene=SCI11.33;product=two-component system sensor kinase;protein_id=NP_626017.1;transl_table=11
NC_003888.3	RefSeq	gene	1865045	1865710	.	+	.	ID=gene1742;Dbxref=GeneID:1097176;Name=SCI11.34;gbkey=Gene;gene=SCI11.34;gene_biotype=protein_coding;gene_synonym=SCI11.34;locus_tag=SCO1745
NC_003888.3	RefSeq	CDS	1865045	1865710	.	+	0	ID=cds1710;Parent=gene1742;Dbxref=Genbank:NP_626018.1,GeneID:1097176;Name=NP_626018.1;Note=SCI11.34%2C probable two-component system response regulator%2C len: 221 aa%3B similar to SW:NARL_ECOLI (EMBL:X13360)%2C NarL%2C Escherichia coli nitrate/nitrite response regulator protein (216 aa)%2C fasta scores%3B opt: 482 z-score: 568.4 E(): 2.5e-24%2C 38.9%25 identity in 211 aa overlap and TR:Q53894 (EMBL:AL035654)%2C AbsA2%2C S.coelicolor  two-component system response regulator (222 aa) (43.1%25 identity in 218 aa overlap). Contains probable helix-turn-helix motif at aa 171-192 (Score 1021%2C +2.66 SD). Contains Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain and to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=CDS;gene=SCI11.34;product=two-component system response regulator;protein_id=NP_626018.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1865051	1865392	.	+	.	ID=id2255;Dbxref=GeneID:1097176;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 139.40%2C E-value 6.6e-38;gbkey=misc_feature;gene=SCI11.34
NC_003888.3	RefSeq	sequence_feature	1865498	1865695	.	+	.	ID=id2256;Dbxref=GeneID:1097176;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 74.50%2C E-value 2.3e-18;gbkey=misc_feature;gene=SCI11.34
NC_003888.3	RefSeq	sequence_feature	1865549	1865632	.	+	.	ID=id2257;Dbxref=GeneID:1097176;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCI11.34
NC_003888.3	RefSeq	stem_loop	1865698	1865758	.	+	.	ID=id2258;Note=stem%2C 26/30 (86%25) matches%2C 1 gaps%3B loop%2C 0 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1865777	1866679	.	-	.	ID=gene1743;Dbxref=GeneID:1097177;Name=sal;gbkey=Gene;gene=sal;gene_biotype=protein_coding;gene_synonym=sal,SCI11.35c;locus_tag=SCO1746
NC_003888.3	RefSeq	CDS	1865777	1866679	.	-	0	ID=cds1711;Parent=gene1743;Dbxref=Genbank:NP_626019.1,GeneID:1097177;Name=NP_626019.1;Note=SCI11.35c%2C sal%2C  serine protease%2C len: 300 aa%3B highly similar to extracellular serine proteases from Streptomyces spp. Identical to TR:Q54392 (EMBL:L44109)%2C Sal%2C Streptomyces lividans chymotrypsin-like serine protease (300 aa)%2C fasta scores%3B opt: 1919 z-score: 1861.1 E(): 0%2C 99.7%25 identity in 300 aa overlap. Similar to SCI11.30c S.coelicolor probable  serine protease (360 aa) (52.2%25 identity in 278 aa overlap). Contains probable N-terminal signal sequence. Contains Pfam match to entry PF00089 trypsin%2C Trypsin%2C PS00134 Serine proteases%2C trypsin family%2C histidine active site and PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=CDS;gene=sal;product=serine protease;protein_id=NP_626019.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1865795	1866334	.	-	.	ID=id2259;Dbxref=GeneID:1097177;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 14.90%2C E-value 1.1e-05;gbkey=misc_feature;gene=sal
NC_003888.3	RefSeq	repeat_region	1865804	1865879	.	-	.	ID=id2260;Dbxref=GeneID:1097177;Note=repeat 3%3B degenerate 76 bp direct repeat;gbkey=repeat_region;gene=sal
NC_003888.3	RefSeq	sequence_feature	1865900	1865935	.	-	.	ID=id2261;Dbxref=GeneID:1097177;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=misc_feature;gene=sal
NC_003888.3	RefSeq	repeat_region	1865902	1866038	.	-	.	ID=id2262;Dbxref=GeneID:1097177;Note=repeat 4%3B degenerate 137 bp direct repeat;gbkey=repeat_region;gene=sal
NC_003888.3	RefSeq	repeat_region	1866124	1866193	.	-	.	ID=id2263;Dbxref=GeneID:1097177;Note=repeat 5%3B degenerate 70 bp direct repeat;gbkey=repeat_region;gene=sal
NC_003888.3	RefSeq	repeat_region	1866225	1866271	.	-	.	ID=id2264;Dbxref=GeneID:1097177;Note=repeat 6%3B degenerate 47 bp direct repeat;gbkey=repeat_region;gene=sal
NC_003888.3	RefSeq	sequence_feature	1866230	1866247	.	-	.	ID=id2265;Dbxref=GeneID:1097177;Note=PS00134 Serine proteases%2C trypsin family%2C histidine active site;gbkey=misc_feature;gene=sal
NC_003888.3	RefSeq	repeat_region	1866276	1866336	.	-	.	ID=id2266;Dbxref=GeneID:1097177;Note=repeat 7%3B degenerate 61 bp direct repeat;gbkey=repeat_region;gene=sal
NC_003888.3	RefSeq	repeat_region	1866407	1866447	.	-	.	ID=id2267;Dbxref=GeneID:1097177;Note=repeat 8%3B degenerate 41 bp direct repeat;gbkey=repeat_region;gene=sal
NC_003888.3	RefSeq	gene	1866887	1867738	.	-	.	ID=gene1744;Dbxref=GeneID:1097178;Name=SCI11.36c;gbkey=Gene;gene=SCI11.36c;gene_biotype=protein_coding;gene_synonym=SCI11.36c;locus_tag=SCO1747
NC_003888.3	RefSeq	CDS	1866887	1867738	.	-	0	ID=cds1712;Parent=gene1744;Dbxref=Genbank:NP_626020.1,GeneID:1097178;Name=NP_626020.1;Note=SCI11.36c%2C hypothetical protein%2C len: 283 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Similar to TR:Q9PFB7 (EMBL:AE003917) hypothetical protein from Xylella fastidiosa (305 aa) fasta scores%3B opt: 394%2C Z-score: 443.5%2C E(): 4.5e-17%2C 35.094%25 identity (37.805%25 ungapped) in 265 aa overlap.;gbkey=CDS;gene=SCI11.36c;product=hypothetical protein;protein_id=NP_626020.1;transl_table=11
NC_003888.3	RefSeq	gene	1867793	1868989	.	-	.	ID=gene1745;Dbxref=GeneID:1097179;Name=2SCI34.01c;gbkey=Gene;gene=2SCI34.01c;gene_biotype=protein_coding;gene_synonym=2SCI34.01c,SCI11.37c;locus_tag=SCO1748
NC_003888.3	RefSeq	CDS	1867793	1868989	.	-	0	ID=cds1713;Parent=gene1745;Dbxref=Genbank:NP_733543.1,GeneID:1097179;Name=NP_733543.1;Note=2SCI34.01c%2C probable expression regulator (fragment)%2C len: >159 aa%3B highly similar to metallothionein-like proteins e.g. TR:Q9WX50 (EMBL:AB012145) Streptomyces lividans MrnA encoding metallothionein-like domain exhibiting repressor function against protease expression%2C 315 aa%3B fasta scores: opt: 507 z-score: 589.0 E(): 2.3e-25%3B 98.8%25 identity in 81 aa overlap~SCI11.37c%2C probable expression regulator%2C partial CDS%2C len: >272 aa%3B highly similar to metallothionein-like proteins e.g. Streptomyces lividans CDS (EMBL:AB012145) exhibiting repressor function against protease expression (315 aa)%2C fasta scores%3B opt: 1943 z-score: 1640.5 E(): 0%2C 97.8%25 identity in 272 aa overlap. The C-terminus contains a Pro-rich region (aa 170-200 approx.)%2C followed by a Cys-rich region (aa 235-272 approx.). Contains PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=2SCI34.01c;product=expression regulator;protein_id=NP_733543.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1867847	1867882	.	-	.	ID=id2268;Dbxref=GeneID:1097179;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=2SCI34.01c
NC_003888.3	RefSeq	ribosome_entry_site	1868994	1868997	.	-	.	ID=id2269;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1869268	1869273	.	+	.	ID=id2270;gbkey=RBS
NC_003888.3	RefSeq	gene	1869279	1869719	.	+	.	ID=gene1746;Dbxref=GeneID:1097180;Name=2SCI34.02;gbkey=Gene;gene=2SCI34.02;gene_biotype=protein_coding;gene_synonym=2SCI34.02;locus_tag=SCO1749
NC_003888.3	RefSeq	CDS	1869279	1869719	.	+	0	ID=cds1714;Parent=gene1746;Dbxref=Genbank:NP_626021.1,GeneID:1097180;Name=NP_626021.1;Note=2SCI34.02%2C conserved hypothetical protein%2C len: 146 aa%3B similar to TR:O06229 (EMBL:Z95388) Mycobacterium tuberculosis hypothetical 27.6 kDa protein MTCY270.21%2C 241 aa%3B fasta scores: opt: 311 z-score: 378.3 E(): 1.3e-13%3B 41.8%25 identity in 141 aa overlap;gbkey=CDS;gene=2SCI34.02;product=hypothetical protein;protein_id=NP_626021.1;transl_table=11
NC_003888.3	RefSeq	gene	1869768	1870961	.	-	.	ID=gene1747;Dbxref=GeneID:1097181;Name=2SCI34.03c;gbkey=Gene;gene=2SCI34.03c;gene_biotype=protein_coding;gene_synonym=2SCI34.03c;locus_tag=SCO1750
NC_003888.3	RefSeq	CDS	1869768	1870961	.	-	0	ID=cds1715;Parent=gene1747;Dbxref=Genbank:NP_626022.1,GeneID:1097181;Name=NP_626022.1;Note=2SCI34.03c%2C probable acyl CoA dehydrogenase%2C len: 397 aa%3B similar to many dehydrogenases%2C e.g. SW:GCDH_HUMAN (EMBL:U69141) Homo sapiens (Human) glutaryl-CoA dehydrogenase%2C mitochondrial precursor (EC 1.3.99.7) GcdH%2C 438 aa%3B fasta scores: opt: 1208 z-score: 1358.9 E(): 0%3B 48.2%25 identity in 398 aa overlap. Contains 2x Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase;gbkey=CDS;gene=2SCI34.03c;product=acyl CoA dehydrogenase;protein_id=NP_626022.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1869798	1869839	.	-	.	ID=id2271;Dbxref=GeneID:1097181;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 0.70%2C E-value 23;gbkey=misc_feature;gene=2SCI34.03c
NC_003888.3	RefSeq	sequence_feature	1870047	1870898	.	-	.	ID=id2272;Dbxref=GeneID:1097181;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 219.70%2C E-value 1.3e-63;gbkey=misc_feature;gene=2SCI34.03c
NC_003888.3	RefSeq	gene	1871317	1872921	.	-	.	ID=gene1748;Dbxref=GeneID:1097182;Name=2SCI34.04c;gbkey=Gene;gene=2SCI34.04c;gene_biotype=protein_coding;gene_synonym=2SCI34.04c;locus_tag=SCO1751
NC_003888.3	RefSeq	CDS	1871317	1872921	.	-	0	ID=cds1716;Parent=gene1748;Dbxref=Genbank:NP_626023.1,GeneID:1097182;Name=NP_626023.1;Note=2SCI34.04c%2C probable transmembrane transport protein%2C len: 534 aa%3B similar to TR:O33968 (EMBL:U80063) Streptomyces cinnamoneus transmembrane%2C proton-dependent transport protein%2C 519 aa%3B fasta scores: opt: 1250 z-score: 1258.8 E(): 0%3B 43.9%25 identity in 513 aa overlap and to SW:SMVA_SALTY (EMBL:D26057) Salmonella typhimurium methyl viologen resistance protein SmvA%2C 496 aa%3B fasta scores: opt: 1018 z-score: 1026.6 E(): 0%3B 37.4%25 identity in 497 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCI34.04c;product=transmembrane transport protein;protein_id=NP_626023.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1872928	1872933	.	-	.	ID=id2273;gbkey=RBS
NC_003888.3	RefSeq	gene	1873183	1874373	.	+	.	ID=gene1749;Dbxref=GeneID:1097183;Name=2SCI34.05;gbkey=Gene;gene=2SCI34.05;gene_biotype=protein_coding;gene_synonym=2SCI34.05;locus_tag=SCO1752
NC_003888.3	RefSeq	CDS	1873183	1874373	.	+	0	ID=cds1717;Parent=gene1749;Dbxref=Genbank:NP_626024.1,GeneID:1097183;Name=NP_626024.1;Note=2SCI34.05%2C possible integral membrane protein%2C len: 396 aa%3B similar to TR:Q9L0K6 (EMBL:AL161691) Streptomyces coelicolor  integral membrane protein SCD40A.03c%2C 434 aa%3B fasta scores: opt: 678 Z-score: 715.1 E(): 3.4e-32%3B 37.530%25 identity in 413 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCI34.05;product=hypothetical protein;protein_id=NP_626024.1;transl_table=11
NC_003888.3	RefSeq	gene	1874625	1875647	.	+	.	ID=gene1750;Dbxref=GeneID:1097184;Name=2SCI34.06;gbkey=Gene;gene=2SCI34.06;gene_biotype=protein_coding;gene_synonym=2SCI34.06;locus_tag=SCO1753
NC_003888.3	RefSeq	CDS	1874625	1875647	.	+	0	ID=cds1718;Parent=gene1750;Dbxref=Genbank:NP_626025.1,GeneID:1097184;Name=NP_626025.1;Note=2SCI34.06%2C possible integral membrane protein%2C len: 340 aa. Contains Pfam match to entry PF01569 PAP2%2C PAP2 superfamily and possible hydrophobic membrane spanning regions. Also presents high content of alanine%2C arginine%2C leucine and proline amino acid residues;gbkey=CDS;gene=2SCI34.06;product=hypothetical protein;protein_id=NP_626025.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1874883	1875332	.	+	.	ID=id2274;Dbxref=GeneID:1097184;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score 27.20%2C E-value 0.00039;gbkey=misc_feature;gene=2SCI34.06
NC_003888.3	RefSeq	gene	1875760	1875975	.	-	.	ID=gene1751;Dbxref=GeneID:1097185;Name=2SCI34.07c;gbkey=Gene;gene=2SCI34.07c;gene_biotype=protein_coding;gene_synonym=2SCI34.07c;locus_tag=SCO1754
NC_003888.3	RefSeq	CDS	1875760	1875975	.	-	0	ID=cds1719;Parent=gene1751;Dbxref=Genbank:NP_626026.1,GeneID:1097185;Name=NP_626026.1;Note=2SCI34.07c%2C unknown%2C len: 71 aa;gbkey=CDS;gene=2SCI34.07c;product=hypothetical protein;protein_id=NP_626026.1;transl_table=11
NC_003888.3	RefSeq	gene	1876319	1877167	.	-	.	ID=gene1752;Dbxref=GeneID:1097186;Name=2SCI34.08c;gbkey=Gene;gene=2SCI34.08c;gene_biotype=protein_coding;gene_synonym=2SCI34.08c;locus_tag=SCO1755
NC_003888.3	RefSeq	CDS	1876319	1877167	.	-	0	ID=cds1720;Parent=gene1752;Dbxref=Genbank:NP_626027.1,GeneID:1097186;Name=NP_626027.1;Note=2SCI34.08c%2C unknown%2C len: 282 aa%3B similar to TR:CAC47960 (EMBL:AJ320278) Streptomyces avermitilis hypothetical protein%2C 278 aa%3B fasta scores: opt: 962 Z-score: 1035.8 E():4.6e-50%3B 63.441%25 identity in 279 aa overlap;gbkey=CDS;gene=2SCI34.08c;product=hypothetical protein;protein_id=NP_626027.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1877179	1877183	.	-	.	ID=id2275;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1877567	1877570	.	+	.	ID=id2276;gbkey=RBS
NC_003888.3	RefSeq	gene	1877577	1878374	.	+	.	ID=gene1753;Dbxref=GeneID:1097187;Name=2SCI34.09;gbkey=Gene;gene=2SCI34.09;gene_biotype=protein_coding;gene_synonym=2SCI34.09;locus_tag=SCO1756
NC_003888.3	RefSeq	CDS	1877577	1878374	.	+	0	ID=cds1721;Parent=gene1753;Dbxref=Genbank:NP_626028.1,GeneID:1097187;Name=NP_626028.1;Note=2SCI34.09%2C unknown%2C len: 265 aa;gbkey=CDS;gene=2SCI34.09;product=hypothetical protein;protein_id=NP_626028.1;transl_table=11
NC_003888.3	RefSeq	gene	1878448	1878741	.	+	.	ID=gene1754;Dbxref=GeneID:1097188;Name=2SCI34.10;gbkey=Gene;gene=2SCI34.10;gene_biotype=protein_coding;gene_synonym=2SCI34.10;locus_tag=SCO1757
NC_003888.3	RefSeq	CDS	1878448	1878741	.	+	0	ID=cds1722;Parent=gene1754;Dbxref=Genbank:NP_626029.1,GeneID:1097188;Name=NP_626029.1;Note=2SCI34.10%2C unknown%2C len: 97 aa;gbkey=CDS;gene=2SCI34.10;product=hypothetical protein;protein_id=NP_626029.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	1878752	1878803	.	-	.	ID=id2277;Note=possible stem loop. Score 78: 25/25 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1878820	1880298	.	-	.	ID=gene1755;Dbxref=GeneID:1097189;Name=engA;gbkey=Gene;gene=engA;gene_biotype=protein_coding;gene_synonym=2SCI34.11c;locus_tag=SCO1758
NC_003888.3	RefSeq	CDS	1878820	1880298	.	-	0	ID=cds1723;Parent=gene1755;Dbxref=Genbank:NP_626030.1,GeneID:1097189;Name=NP_626030.1;Note=synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains;gbkey=CDS;gene=engA;product=GTP-binding protein EngA;protein_id=NP_626030.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1879159	1879935	.	-	.	ID=id2278;Dbxref=GeneID:1097189;Note=Pfam match to entry PF01926 MMR_HSR1%2C GTPase of unknown function%2C score 107.00%2C E-value 3.8e-28;gbkey=misc_feature;gene=engA
NC_003888.3	RefSeq	sequence_feature	1879573	1879596	.	-	.	ID=id2279;Dbxref=GeneID:1097189;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=engA
NC_003888.3	RefSeq	sequence_feature	1880098	1880121	.	-	.	ID=id2280;Dbxref=GeneID:1097189;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=engA
NC_003888.3	RefSeq	ribosome_entry_site	1880308	1880312	.	-	.	ID=id2281;gbkey=RBS
NC_003888.3	RefSeq	gene	1880373	1881035	.	-	.	ID=gene1756;Dbxref=GeneID:1097190;Name=2SCI34.12c;gbkey=Gene;gene=2SCI34.12c;gene_biotype=protein_coding;gene_synonym=2SCI34.12c;locus_tag=SCO1759
NC_003888.3	RefSeq	CDS	1880373	1881035	.	-	0	ID=cds1724;Parent=gene1756;Dbxref=Genbank:NP_626031.1,GeneID:1097190;Name=NP_626031.1;Note=2SCI34.12c%2C possible transferase%2C len: 220 aa%3B similar to TR:O67841 (EMBL:AE000770) Aquifex aeolicus 2-acylglycerophosphoethanolamine acyltransferase Aas%2C 211 aa%3B fasta scores: opt: 325 z-score: 388.0 E(): 3.6e-14%3B 33.3%25 identity in 189 aa overlap. Contains Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase;gbkey=CDS;gene=2SCI34.12c;product=transferase;protein_id=NP_626031.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1880394	1880927	.	-	.	ID=id2282;Dbxref=GeneID:1097190;Note=Pfam match to entry PF01553 Acyltransferase%2C Acyltransferase%2C score 83.10%2C E-value 5.9e-21;gbkey=misc_feature;gene=2SCI34.12c
NC_003888.3	RefSeq	gene	1881032	1881727	.	-	.	ID=gene1757;Dbxref=GeneID:1097191;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;gene_synonym=2SCI34.13c;locus_tag=SCO1760
NC_003888.3	RefSeq	CDS	1881032	1881727	.	-	0	ID=cds1725;Parent=gene1757;Dbxref=Genbank:NP_626032.1,GeneID:1097191;Name=NP_626032.1;Note=Catalyzes the formation of (d)CDP from ATP and (d)CMP;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=NP_626032.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1881062	1881529	.	-	.	ID=id2283;Dbxref=GeneID:1097191;Note=Pfam match to entry PF02224 Cytidylate_kin%2C Cytidylate kinase%2C score 180.00%2C E-value 3.8e-50;gbkey=misc_feature;gene=cmk
NC_003888.3	RefSeq	sequence_feature	1881653	1881676	.	-	.	ID=id2284;Dbxref=GeneID:1097191;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cmk
NC_003888.3	RefSeq	ribosome_entry_site	1881735	1881739	.	-	.	ID=id2285;gbkey=RBS
NC_003888.3	RefSeq	gene	1882015	1883100	.	-	.	ID=gene1758;Dbxref=GeneID:1097192;Name=2SCI34.14c;gbkey=Gene;gene=2SCI34.14c;gene_biotype=protein_coding;gene_synonym=2SCI34.14c,SCI51.01c;locus_tag=SCO1761
NC_003888.3	RefSeq	CDS	1882015	1883100	.	-	0	ID=cds1726;Parent=gene1758;Dbxref=Genbank:NP_733544.1,GeneID:1097192;Name=NP_733544.1;Note=catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate;gbkey=CDS;gene=2SCI34.14c;product=prephenate dehydrogenase;protein_id=NP_733544.1;transl_table=11
NC_003888.3	RefSeq	gene	1883097	1883459	.	-	.	ID=gene1759;Dbxref=GeneID:1097193;Name=SCI51.02c;gbkey=Gene;gene=SCI51.02c;gene_biotype=protein_coding;gene_synonym=SCI51.02c;locus_tag=SCO1762
NC_003888.3	RefSeq	CDS	1883097	1883459	.	-	0	ID=cds1727;Parent=gene1759;Dbxref=Genbank:NP_626033.1,GeneID:1097193;Name=NP_626033.1;Note=SCI51.02c%2C possible chorismate mutase%2C len: 120 aa%3B similar to e.g. SW:CHMU_BACSU (EMBL:M32278)%2C AroH%2C Bacillus subtilis chorismate mutase (127 aa)%2C fasta scores%3B opt: 307 z-score: 407.7 E(): 2.2e-15%2C 38.1%25 identity in 118 aa overlap;gbkey=CDS;gene=SCI51.02c;product=chorismate mutase;protein_id=NP_626033.1;transl_table=11
NC_003888.3	RefSeq	gene	1883621	1884016	.	+	.	ID=gene1760;Dbxref=GeneID:1097194;Name=SCI51.03;gbkey=Gene;gene=SCI51.03;gene_biotype=protein_coding;gene_synonym=SCI51.03;locus_tag=SCO1763
NC_003888.3	RefSeq	CDS	1883621	1884016	.	+	0	ID=cds1728;Parent=gene1760;Dbxref=Genbank:NP_626034.1,GeneID:1097194;Name=NP_626034.1;Note=SCI51.03%2C possible iron-sulphur protein ( hypothetical protein)%2C len: 131 aa%3B similar to part of many cytochrome B6-F complex iron-sulfur subunits from bacteria and chloroplasts e.g. SW:UCRI_CHLLT (EMBL:X73628)%2C PetC%2C Chlorobium limicola F. sp. thiosulfatophilum iron-sulfur subunit (180 aa)%2C fasta scores%3B opt: 198 z-score: 217.9 E(): 8.2e-05%2C 34.4%25 identity in 90 aa overlap. Similar to TR:Q9Z510 (EMBL:AL035591) Streptomyces coelicolor iron sulphur binding protein (141 aa) (36.6%25 identity in 131 aa overlap). Contains Pfam match to entry PF00355 Rieske%2C Rieske iron-sulfur protein. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI51.03;product=iron-sulfur protein;protein_id=NP_626034.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1883840	1883968	.	+	.	ID=id2286;Dbxref=GeneID:1097194;Note=Pfam match to entry PF00355 Rieske%2C Rieske iron-sulfur protein%2C score 25.60%2C E-value 7.4e-07;gbkey=misc_feature;gene=SCI51.03
NC_003888.3	RefSeq	gene	1884039	1884800	.	+	.	ID=gene1761;Dbxref=GeneID:1097195;Name=SCI51.04;gbkey=Gene;gene=SCI51.04;gene_biotype=protein_coding;gene_synonym=SCI51.04;locus_tag=SCO1764
NC_003888.3	RefSeq	CDS	1884039	1884800	.	+	0	ID=cds1729;Parent=gene1761;Dbxref=Genbank:NP_626035.1,GeneID:1097195;Name=NP_626035.1;Note=SCI51.04%2C hypothetical protein%2C len: 253 aa%3B unknown function%2C shows weak similarity to TR:P94389 (EMBL:D50453)%2C YcgL%2C Bacillus subtilis hypothetical protein (260 aa)%2C fasta scores%3B opt: 177 z-score: 222.1 E(): 5.1e-05%2C 28.1%25 identity in 196 aa overlap. There is some overlap with the C-terminus of SCI51.5c and weak similarity with SCI51.5c (250 aa) (29.6%25 identity in 233 aa overlap);gbkey=CDS;gene=SCI51.04;product=hypothetical protein;protein_id=NP_626035.1;transl_table=11
NC_003888.3	RefSeq	gene	1884726	1885478	.	-	.	ID=gene1762;Dbxref=GeneID:1097196;Name=SCI51.05c;gbkey=Gene;gene=SCI51.05c;gene_biotype=protein_coding;gene_synonym=SCI51.05c;locus_tag=SCO1765
NC_003888.3	RefSeq	CDS	1884726	1885478	.	-	0	ID=cds1730;Parent=gene1762;Dbxref=Genbank:NP_626036.1,GeneID:1097196;Name=NP_626036.1;Note=SCI51.05c%2C hypothetical protein%2C len: 250 aa%3B unknown function%2C similar to SW:Y002_METJA (EMBL:U67459) Methanococcus jannaschii hypothetical protein (243 aa)%2C fasta scores%3B opt: 290 z-score: 356.7 E(): 1.6e-12%2C 28.3%25 identity in 223 aa overlap. There is some overlap with the C-terminus of SCI51.04 and weak similarity with SCI51.04 (253 aa) (29.6%25 identity in 233 aa overlap);gbkey=CDS;gene=SCI51.05c;product=hypothetical protein;protein_id=NP_626036.1;transl_table=11
NC_003888.3	RefSeq	gene	1885483	1886502	.	-	.	ID=gene1763;Dbxref=GeneID:1097197;Name=SCI51.06c;gbkey=Gene;gene=SCI51.06c;gene_biotype=protein_coding;gene_synonym=SCI51.06c;locus_tag=SCO1766
NC_003888.3	RefSeq	CDS	1885483	1886502	.	-	0	ID=cds1731;Parent=gene1763;Dbxref=Genbank:NP_626037.1,GeneID:1097197;Name=NP_626037.1;Note=SCI51.06c%2C possible glycohydrolase%2C len: 339 aa%3B shows weak similarity to ADP-ribosyl glycohydrolases from nitrogen-fixing bacteria e.g. SW:DRAG_RHORU (EMBL:X16187)%2C DraG%2C Rhodospirillum rubrum ADP-ribosylglycohydrolase (294 aa)%2C fasta scores%3B opt: 211 z-score: 253.7 E(): 8.9e-07%2C 25.6%25 identity in 332 aa overlap;gbkey=CDS;gene=SCI51.06c;product=glycohydrolase;protein_id=NP_626037.1;transl_table=11
NC_003888.3	RefSeq	gene	1886499	1887218	.	-	.	ID=gene1764;Dbxref=GeneID:1097198;Name=SCI51.07c;gbkey=Gene;gene=SCI51.07c;gene_biotype=protein_coding;gene_synonym=SCI51.07c;locus_tag=SCO1767
NC_003888.3	RefSeq	CDS	1886499	1887218	.	-	0	ID=cds1732;Parent=gene1764;Dbxref=Genbank:NP_626038.1,GeneID:1097198;Name=NP_626038.1;Note=SCI51.07c%2C possible DNA hydrolase%2C len: 239 aa%3B shows weak similarity to nucleotide pyrophosphatases e.g. TR:Q58549 (EMBL:U67557) Methanococcus jannaschii ADP-ribose pyrophosphatase (169 aa)%2C fasta scores%3B opt: 256 z-score: 312.0 E(): 5e-10%2C 43.8%25 identity in 112 aa overlap and SW:MUTX_STRMU (EMBL:D78182)%2C MutX%2C Streptococcus mutans mutator MutT protein (dGTP pyrophosphohydrolase) (159 aa) (30.5%25 identity in 118 aa overlap). Also similar many hypothetical proteins e.g. TR:O69994 (EMBL:AL022374) S.coelicolor possible DNA hydrolase (294 aa) (56.2%25 identity in 249 aa overlap) and TR:O06597 (EMBL:Z95586) Mycobacterium tuberculosis hypothetical protein (236 aa) (34.8%25 identity in 221 aa overlap). Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and PS00893 mutT domain signature;gbkey=CDS;gene=SCI51.07c;product=DNA hydrolase;protein_id=NP_626038.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1887006	1887131	.	-	.	ID=id2287;Dbxref=GeneID:1097198;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 36.50%2C E-value 5.7e-09;gbkey=misc_feature;gene=SCI51.07c
NC_003888.3	RefSeq	sequence_feature	1887015	1887074	.	-	.	ID=id2288;Dbxref=GeneID:1097198;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SCI51.07c
NC_003888.3	RefSeq	gene	1887312	1888427	.	-	.	ID=gene1765;Dbxref=GeneID:1097199;Name=SCI51.08c;gbkey=Gene;gene=SCI51.08c;gene_biotype=protein_coding;gene_synonym=SCI51.08c;locus_tag=SCO1768
NC_003888.3	RefSeq	CDS	1887312	1888427	.	-	0	ID=cds1733;Parent=gene1765;Dbxref=Genbank:NP_626039.1,GeneID:1097199;Name=NP_626039.1;Note=SCI51.08c%2C possible pseudouridine synthase%2C len: 371 aa%3B part of this CDS shows similarity to SW:RSUA_ECOLI (EMBL:U00008)%2C rsuA%2C Escherichia coli ribosomal small subunit pseudouridine synthase A (231 aa)%2C fasta scores%3B opt: 389 z-score: 356.8 E(): 1.6e-12%2C 35.2%25 identity in 233 aa overlap and to many pseudouridine synthases. Similarity to SW:YRSU_MYCLE (EMBL:Z95117) Mycobacterium leprae hypothetical protein (256 aa) (54.6%25 identity in 240 aa overlap) and its Mycobacterium tuberculosis counterpart is high. GC frameplot and an absence of possible start codons suggests that an N-terminal extension of approx. 130 aa is present in this sequence%2C but not in similar sequences. The N-terminus is Ser- and Gly-rich. Contains Pfam matches to entry PF01479 S4%2C S4 domain and to entry PF00849 YABO%2C Hypothetical yabO/yceC/sfhB family. Contains PS01149 RsuA family of pseudouridine synthase signature;gbkey=CDS;gene=SCI51.08c;product=pseudouridine synthase;protein_id=NP_626039.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1887435	1887845	.	-	.	ID=id2289;Dbxref=GeneID:1097199;Note=Pfam match to entry PF00849 YABO%2C Hypothetical yabO/yceC/sfhB family%2C score -7.50%2C E-value 1.7e-05;gbkey=misc_feature;gene=SCI51.08c
NC_003888.3	RefSeq	sequence_feature	1887687	1887731	.	-	.	ID=id2290;Dbxref=GeneID:1097199;Note=PS01149 RsuA family of pseudouridine synthase signature;gbkey=misc_feature;gene=SCI51.08c
NC_003888.3	RefSeq	sequence_feature	1887843	1888025	.	-	.	ID=id2291;Dbxref=GeneID:1097199;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 42.90%2C E-value 7.1e-09;gbkey=misc_feature;gene=SCI51.08c
NC_003888.3	RefSeq	gene	1888427	1889098	.	-	.	ID=gene1766;Dbxref=GeneID:1097200;Name=SCI51.09c;gbkey=Gene;gene=SCI51.09c;gene_biotype=protein_coding;gene_synonym=SCI51.09c;locus_tag=SCO1769
NC_003888.3	RefSeq	CDS	1888427	1889098	.	-	0	ID=cds1734;Parent=gene1766;Dbxref=Genbank:NP_626040.1,GeneID:1097200;Name=NP_626040.1;Note=SCI51.09c%2C conserved hypothetical protein%2C len: 223 aa%3B unknown function%2C similar to hypothetical proteins from Mycobacterium leprae and Mycobacterium tuberculosis e.g. TR:O05669 (EMBL:Z95117) Mycobacterium leprae hypothetical protein (231 aa)%2C fasta scores%3B opt: 633 z-score: 766.9 E(): 0%2C 54.5%25 identity in 187 aa overlap;gbkey=CDS;gene=SCI51.09c;product=hypothetical protein;protein_id=NP_626040.1;transl_table=11
NC_003888.3	RefSeq	gene	1889095	1889889	.	-	.	ID=gene1767;Dbxref=GeneID:1097201;Name=SCI51.10c;gbkey=Gene;gene=SCI51.10c;gene_biotype=protein_coding;gene_synonym=SCI51.10c;locus_tag=SCO1770
NC_003888.3	RefSeq	CDS	1889095	1889889	.	-	0	ID=cds1735;Parent=gene1767;Dbxref=Genbank:NP_626041.1,GeneID:1097201;Name=NP_626041.1;Note=SCI51.10c%2C conserved hypothetical protein%2C len: 264 aa%3B unknown function%2C similar to hypothetical proteins from Mycobacterium leprae%2C Mycobacterium tuberculosis and Bacillus subtilis e.g. TR:O33208 (EMBL:Z98268) Mycobacterium tuberculosis hypothetical protein (278 aa)%2C fasta scores%3B opt: 875 z-score: 760.8 E(): 0%2C 56.2%25 identity in 267 aa overlap;gbkey=CDS;gene=SCI51.10c;product=hypothetical protein;protein_id=NP_626041.1;transl_table=11
NC_003888.3	RefSeq	gene	1890421	1890978	.	-	.	ID=gene1768;Dbxref=GeneID:1097202;Name=SCI51.11c;gbkey=Gene;gene=SCI51.11c;gene_biotype=protein_coding;gene_synonym=SCI51.11c;locus_tag=SCO1771
NC_003888.3	RefSeq	CDS	1890421	1890978	.	-	0	ID=cds1736;Parent=gene1768;Dbxref=Genbank:NP_626042.1,GeneID:1097202;Name=NP_626042.1;Note=SCI51.11c%2C hypothetical protein%2C len: 185 aa%3B unknown function%2C improbable CDS suggested by positional base preference and amino acid composition;gbkey=CDS;gene=SCI51.11c;product=hypothetical protein;protein_id=NP_626042.1;transl_table=11
NC_003888.3	RefSeq	gene	1890975	1891997	.	-	.	ID=gene1769;Dbxref=GeneID:1097203;Name=SCI51.12c;gbkey=Gene;gene=SCI51.12c;gene_biotype=protein_coding;gene_synonym=SCI51.12c;locus_tag=SCO1772
NC_003888.3	RefSeq	CDS	1890975	1891997	.	-	0	ID=cds1737;Parent=gene1769;Dbxref=Genbank:NP_626043.1,GeneID:1097203;Name=NP_626043.1;Note=SCI51.12c%2C possible partitioning or sporulation protein%2C len: 340 aa%3B the C-terminal region is similar to SW:SOJ_BACSU (EMBL:D26185)%2C Soj%2C Bacillus subtilis sporulation protein (253 aa)%2C fasta scores%3B opt: 790 z-score: 857.6 E(): 0%2C 48.8%25 identity in 250 aa overlap and TR:O05189 (EMBL:U87804)%2C ParA%2C Caulobacter crescentus chromosome partitioning protein (266 aa) (46.3%25 identity in 255 aa overlap). It is closer in predicted length to similar proteins from Mycobacterium tuberculosis and Mycobacterium leprae e.g. TR:O33207 (EMBL:Z98268) Mycobacterium tuberculosis hypothetical protein (318 aa) (65.8%25 identity in 301 aa overlap). Similar to SCH24.08 (EMBL:AL049826) S.coelicolor possible partitioning or sporulation protein (275 aa) (45.8%25 identity in 249 aa overlap) to many other members of the parA family. The start codon position is suggested by GC frameplot and codon usage plots. Alternative start codons are present at codons 3%2C 8 and 11. Contains Pfam match to entry PF00991 ParA%2C ParA family ATPase;gbkey=CDS;gene=SCI51.12c;product=partitioning or sporulation protein;protein_id=NP_626043.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1891161	1891496	.	-	.	ID=id2292;Dbxref=GeneID:1097203;Note=Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 150.20%2C E-value 3.6e-41;gbkey=misc_feature;gene=SCI51.12c
NC_003888.3	RefSeq	stem_loop	1892401	1892447	.	-	.	ID=id2293;Note=stem%2C 21/21 (100%25) matches%2C 0 gaps%3B loop%2C 5 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1892493	1893608	.	-	.	ID=gene1770;Dbxref=GeneID:1097204;Name=SCI51.13c;gbkey=Gene;gene=SCI51.13c;gene_biotype=protein_coding;gene_synonym=SCI51.13c;locus_tag=SCO1773
NC_003888.3	RefSeq	CDS	1892493	1893608	.	-	0	ID=cds1738;Parent=gene1770;Dbxref=Genbank:NP_626044.1,GeneID:1097204;Name=NP_626044.1;Note=SCI51.13c%2C probable L-alanine dehydrogenase%2C len: 371 aa%3B similar to many alanine dehydrogenases e.g. SW:DHA_MYCTU (EMBL:X63069)%2C ald%2C Mycobacterium tuberculosis L-alanine dehydrogenase (371 aa)%2C fasta scores%3B opt: 1569 z-score: 1722.1 E(): 0%2C 65.8%25 identity in 371 aa overlap. Contains Pfam match to entry PF01262 AlaDh_PNT%2C Alanine dehydrogenase/pyridine nucleotide transhydrogenase and PS00836 Alanine dehydrogenase %26 pyridine nucleotide transhydrogenase signature 1;gbkey=CDS;gene=SCI51.13c;product=L-alanine dehydrogenase;protein_id=NP_626044.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1892496	1893608	.	-	.	ID=id2294;Dbxref=GeneID:1097204;Note=Pfam match to entry PF01262 AlaDh_PNT%2C Alanine dehydrogenase/pyridine nucleotide transhydrogenase%2C score 656.50%2C E-value 1.4e-193;gbkey=misc_feature;gene=SCI51.13c
NC_003888.3	RefSeq	sequence_feature	1893519	1893599	.	-	.	ID=id2295;Dbxref=GeneID:1097204;Note=PS00836 Alanine dehydrogenase %26 pyridine nucleotide transhydrogenase signature 1;gbkey=misc_feature;gene=SCI51.13c
NC_003888.3	RefSeq	gene	1893751	1895799	.	-	.	ID=gene1771;Dbxref=GeneID:1097205;Name=SCI51.14c;gbkey=Gene;gene=SCI51.14c;gene_biotype=protein_coding;gene_synonym=SCI51.14c;locus_tag=SCO1774
NC_003888.3	RefSeq	CDS	1893751	1895799	.	-	0	ID=cds1739;Parent=gene1771;Dbxref=Genbank:NP_626045.1,GeneID:1097205;Name=NP_626045.1;Note=SCI51.14c%2C probable regulatory protein%2C len: 682 aa%3B similar to the C-terminal region of other regulators from S.coelicolor e.g. SW:AFSR_STRCO (EMBL:D90155)%2C AfsR%2C Streptomyces coelicolor global regulatory protein for secondary metabolite formation (993 aa)%2C fasta scores%3B opt: 474 z-score: 505.1 E(): 8.8e-21%2C 27.7%25 identity in 656 aa overlap. The N-terminal and C-terminal regions of AfsR have been shown to direct actinorhodin production independently. The N-terminal half of this protein is also weakly similar to the C-terminal region of TR:Q9Z389 (EMBL:AL035654)%2C CdaR%2C S.coelicolor transcriptional activator protein for CDA biosynthesis (592 aa) (28.6%25 identity in 332 aa overlap);gbkey=CDS;gene=SCI51.14c;product=regulatory protein;protein_id=NP_626045.1;transl_table=11
NC_003888.3	RefSeq	gene	1895948	1896583	.	-	.	ID=gene1772;Dbxref=GeneID:1097206;Name=SCI51.15c;gbkey=Gene;gene=SCI51.15c;gene_biotype=protein_coding;gene_synonym=SCI51.15c;locus_tag=SCO1775
NC_003888.3	RefSeq	CDS	1895948	1896583	.	-	0	ID=cds1740;Parent=gene1772;Dbxref=Genbank:NP_626046.1,GeneID:1097206;Name=NP_626046.1;Note=SCI51.15c%2C conserved hypothetical protein%2C len: 211 aa%3B unknown function%2C similar to many bacterial hypothetical proteins e.g. TR:O33199 (EMBL:Z98268) Mycobacterium tuberculosis hypothetical protein (207 aa)%2C fasta scores%3B opt: 508 z-score: 616.4 E(): 5.5e-27%2C 43.1%25 identity in 197 aa overlap. Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein;gbkey=CDS;gene=SCI51.15c;product=hypothetical protein;protein_id=NP_626046.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1896272	1896394	.	-	.	ID=id2296;Dbxref=GeneID:1097206;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 26.70%2C E-value 3.9e-06;gbkey=misc_feature;gene=SCI51.15c
NC_003888.3	RefSeq	gene	1896671	1898320	.	-	.	ID=gene1773;Dbxref=GeneID:1097207;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;gene_synonym=SCI51.16c;locus_tag=SCO1776
NC_003888.3	RefSeq	CDS	1896671	1898320	.	-	0	ID=cds1741;Parent=gene1773;Dbxref=Genbank:NP_626047.1,GeneID:1097207;Name=NP_626047.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthetase;protein_id=NP_626047.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1897142	1897177	.	-	.	ID=id2297;Dbxref=GeneID:1097207;Note=PS00442 Glutamine amidotransferases class-I active site;gbkey=misc_feature;gene=pyrG
NC_003888.3	RefSeq	gene	1898870	1900708	.	+	.	ID=gene1774;Dbxref=GeneID:1097208;Name=SCI51.17;gbkey=Gene;gene=SCI51.17;gene_biotype=protein_coding;gene_synonym=SCI51.17;locus_tag=SCO1777
NC_003888.3	RefSeq	CDS	1898870	1900708	.	+	0	ID=cds1742;Parent=gene1774;Dbxref=Genbank:NP_626048.1,GeneID:1097208;Name=NP_626048.1;Note=SCI51.17%2C conserved hypothetical protein%2C len: 612 aa%3B unknown function%2C similar to TR:P71741 (EMBL:Z81368) Mycobacterium tuberculosis hypothetical protein (642 aa)%2C fasta scores%3B opt: 1146 z-score: 1320.1 E(): 0%2C 40.6%25 identity in 623 aa overlap and SW:YAY3_SCHPO (EMBL:Z69380) Schizosaccharomyces pombe hypothetical protein (649 aa) (33.5%25 identity in 641 aa overlap). Also similar to SCE36.11C (EMBL:AL049763) S.coelicolor conserved hypothetical protein (fragment) (612 aa) (42.6%25 identity in 615 aa overlap);gbkey=CDS;gene=SCI51.17;product=hypothetical protein;protein_id=NP_626048.1;transl_table=11
NC_003888.3	RefSeq	gene	1901295	1902941	.	+	.	ID=gene1775;Dbxref=GeneID:1097209;Name=SCI51.18;gbkey=Gene;gene=SCI51.18;gene_biotype=protein_coding;gene_synonym=SCI51.18;locus_tag=SCO1778
NC_003888.3	RefSeq	CDS	1901295	1902941	.	+	0	ID=cds1743;Parent=gene1775;Dbxref=Genbank:NP_626049.1,GeneID:1097209;Name=NP_626049.1;Note=SCI51.18%2C possible transcriptional regulator%2C len: 548 aa%3B shows weak similarity to TR:Q00509 (EMBL:X63451)%2C SmrR%2C Streptomyces ambofaciens regulatory gene governing the expression of a polyketide synthase (604 aa)%2C fasta scores%3B opt: 205 z-score: 220.9 E(): 5.9e-05%2C 26.5%25 identity in 460 aa overlap. Also similar to TR:O69807 (EMBL:AL023496) Streptomyces coelicolor hypothetical protein (537 aa) (32.4%25 identity in 547 aa overlap) and PkwR (EMBL:AF115313) Thermomonospora curvata regulatory protein (535 aa) (28.8%25 identity in 534 aa overlap). Contains probable helix-turn-helix motif at aa 498-519 (Score 1712 (+5.02 SD);gbkey=CDS;gene=SCI51.18;product=transcriptional regulator;protein_id=NP_626049.1;transl_table=11
NC_003888.3	RefSeq	gene	1902964	1904169	.	-	.	ID=gene1776;Dbxref=GeneID:1097210;Name=SCI51.19c;gbkey=Gene;gene=SCI51.19c;gene_biotype=protein_coding;gene_synonym=SCI51.19c;locus_tag=SCO1779
NC_003888.3	RefSeq	CDS	1902964	1904169	.	-	0	ID=cds1744;Parent=gene1776;Dbxref=Genbank:NP_626050.1,GeneID:1097210;Name=NP_626050.1;Note=SCI51.19c%2C hypothetical protein%2C len: 401 aa%3B unknown function%2C C-terminus shows weak similarity to SW:YPJH_BACSU (EMBL:L47709)%2C YpjH%2C Bacillus subtilis hypothetical protein (377 aa)%2C fasta scores%3B opt: 211 z-score: 223.0 E(): 1e-05%2C 28.0%25 identity in 193 aa overlap. Shows similarity to TR:Q9Z5B7 (EMBL:AL035478) S.coelicolor possible transferase (402 aa) (31.9%25 identity in 407 aa overlap). Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1;gbkey=CDS;gene=SCI51.19c;product=hypothetical protein;protein_id=NP_626050.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1903051	1903497	.	-	.	ID=id2298;Dbxref=GeneID:1097210;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 49.80%2C E-value 4.1e-13;gbkey=misc_feature;gene=SCI51.19c
NC_003888.3	RefSeq	gene	1904440	1906158	.	-	.	ID=gene1777;Dbxref=GeneID:1097211;Name=SCI51.20c;gbkey=Gene;gene=SCI51.20c;gene_biotype=protein_coding;gene_synonym=SCI51.20c;locus_tag=SCO1780
NC_003888.3	RefSeq	CDS	1904440	1906158	.	-	0	ID=cds1745;Parent=gene1777;Dbxref=Genbank:NP_626051.1,GeneID:1097211;Name=NP_626051.1;Note=SCI51.20c%2C possible DNA repair protein%2C len: 572 aa%3B similar to SW:RECN_ECOLI (EMBL:Y00357)%2C recN%2C Escherichia coli DNA repair protein (553 aa)%2C fasta scores%3B opt: 425 z-score: 428.6 E(): 3.6e-17%2C 33.1%25 identity in 568 aa overlap and to recN homologues. Contains probable coiled-coils from 155 to 189 (35 residues) (Max score: 1.472%2C probability 0.91) and from 336 to 376 (41 residues) (Max score: 1.517%2C probability 0.96). Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI51.20c;product=DNA repair protein;protein_id=NP_626051.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1906063	1906086	.	-	.	ID=id2299;Dbxref=GeneID:1097211;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI51.20c
NC_003888.3	RefSeq	gene	1906323	1907228	.	-	.	ID=gene1778;Dbxref=GeneID:1097212;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;gene_synonym=SCI51.21c;locus_tag=SCO1781
NC_003888.3	RefSeq	CDS	1906323	1907228	.	-	0	ID=cds1746;Parent=gene1778;Dbxref=Genbank:NP_626052.1,GeneID:1097212;Name=NP_626052.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=inorganic polyphosphate/ATP-NAD kinase;protein_id=NP_626052.1;transl_table=11
NC_003888.3	RefSeq	gene	1907225	1908040	.	-	.	ID=gene1779;Dbxref=GeneID:1097213;Name=SCI51.22c;gbkey=Gene;gene=SCI51.22c;gene_biotype=protein_coding;gene_synonym=SCI51.22c;locus_tag=SCO1782
NC_003888.3	RefSeq	CDS	1907225	1908040	.	-	0	ID=cds1747;Parent=gene1779;Dbxref=Genbank:NP_626053.1,GeneID:1097213;Name=NP_626053.1;Note=SCI51.22c%2C possible membrane protein%2C len: 271 aa%3B unknown function%2C similar to hemolysins and hemolysin-like hypothetical proteins e.g. SW:HLYA_TREHY (EMBL:X61684)%2C tlyA%2C Treponema hyodysenteriae hemolysin A (240 aa)%2C fasta scores%3B opt: 457 z-score: 532.9 E(): 2.5e-22%2C 35.4%25 identity in 240 aa overlap and TR:Q50760 (EMBL:X98295)%2C tlyA%2C Mycobacterium tuberculosis. Contains a hydrophobic%2C possible membrane-spanning region. Contains Pfam match to entry PF01479 S4%2C S4 domain and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI51.22c;product=hypothetical protein;protein_id=NP_626053.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1907236	1907240	.	-	.	ID=id2300;Dbxref=GeneID:1097213;Note=possible RBS;gbkey=RBS;gene=SCI51.22c
NC_003888.3	RefSeq	sequence_feature	1907834	1908022	.	-	.	ID=id2301;Dbxref=GeneID:1097213;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 51.20%2C E-value 2.2e-11;gbkey=misc_feature;gene=SCI51.22c
NC_003888.3	RefSeq	sequence_feature	1907924	1907947	.	-	.	ID=id2302;Dbxref=GeneID:1097213;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI51.22c
NC_003888.3	RefSeq	gene	1908048	1908395	.	-	.	ID=gene1780;Dbxref=GeneID:1097214;Name=SCI51.23c;gbkey=Gene;gene=SCI51.23c;gene_biotype=protein_coding;gene_synonym=SCI51.23c;locus_tag=SCO1783
NC_003888.3	RefSeq	CDS	1908048	1908395	.	-	0	ID=cds1748;Parent=gene1780;Dbxref=Genbank:NP_626054.1,GeneID:1097214;Name=NP_626054.1;Note=SCI51.23c%2C hypothetical protein%2C len: 115 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. The C-terminus is Pro-rich;gbkey=CDS;gene=SCI51.23c;product=hypothetical protein;protein_id=NP_626054.1;transl_table=11
NC_003888.3	RefSeq	gene	1908438	1908785	.	+	.	ID=gene1781;Dbxref=GeneID:1097215;Name=SCI51.24;gbkey=Gene;gene=SCI51.24;gene_biotype=protein_coding;gene_synonym=SCI51.24;locus_tag=SCO1784
NC_003888.3	RefSeq	CDS	1908438	1908785	.	+	0	ID=cds1749;Parent=gene1781;Dbxref=Genbank:NP_626055.1,GeneID:1097215;Name=NP_626055.1;Note=SCI51.24%2C hypothetical protein%2C len: 115 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCI51.24;product=hypothetical protein;protein_id=NP_626055.1;transl_table=11
NC_003888.3	RefSeq	gene	1908769	1909674	.	-	.	ID=gene1782;Dbxref=GeneID:1097216;Name=SCI51.25c;gbkey=Gene;gene=SCI51.25c;gene_biotype=protein_coding;gene_synonym=SCI51.25c;locus_tag=SCO1785
NC_003888.3	RefSeq	CDS	1908769	1909674	.	-	0	ID=cds1750;Parent=gene1782;Dbxref=Genbank:NP_626056.1,GeneID:1097216;Name=NP_626056.1;Note=SCI51.25c%2C probable iron-siderophore uptake system ATP-binding component%2C len: 301 aa%3B similar to many ATP-binding components from binding-protein-dependent iron uptake systems using a range of siderophores e.g. SW:FEPC_ECOLI (EMBL:X57471)%2C fepC%2C Escherichia coli ferric enterobactin transport ATP-binding protein (271 aa)%2C fasta scores%3B opt: 1101 z-score: 1184.4 E(): 0%2C 61.5%25 identity in 260 aa overlap. Similar to other binding-protein-dependent permease subunits e.g. SC9B1.09 (EMBL:AL049727) S.coelicolor ABC transporter ATP-binding subunit (386 aa) (37.7%25 identity in 228 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCI51.25c;product=iron-siderophore uptake system ATP-binding protein;protein_id=NP_626056.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1908970	1909533	.	-	.	ID=id2303;Dbxref=GeneID:1097216;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 183.60%2C E-value 3.2e-51;gbkey=misc_feature;gene=SCI51.25c
NC_003888.3	RefSeq	sequence_feature	1909156	1909200	.	-	.	ID=id2304;Dbxref=GeneID:1097216;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCI51.25c
NC_003888.3	RefSeq	sequence_feature	1909489	1909512	.	-	.	ID=id2305;Dbxref=GeneID:1097216;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI51.25c
NC_003888.3	RefSeq	gene	1909671	1910798	.	-	.	ID=gene1783;Dbxref=GeneID:1097217;Name=SCI51.26c;gbkey=Gene;gene=SCI51.26c;gene_biotype=protein_coding;gene_synonym=SCI51.26c;locus_tag=SCO1786
NC_003888.3	RefSeq	CDS	1909671	1910798	.	-	0	ID=cds1751;Parent=gene1783;Dbxref=Genbank:NP_626057.1,GeneID:1097217;Name=NP_626057.1;Note=SCI51.26c%2C probable iron-siderophore uptake system transmembrane component%2C len: 375 aa%3B similar to many transmembrane components from binding-protein-dependent iron uptake systems using a range of siderophores e.g. SW:FEPG_ECOLI (EMBL:X57471)%2C fepG%2C Escherichia coli ferric enterobactin transport protein (330 aa)%2C fasta scores%3B opt: 946 z-score: 1034.3 E(): 0%2C 50.0%25 identity in 310 aa overlap. Similar to neighbouring SCI51.27c%2C probable iron-siderophore uptake system transmembrane component (348 aa) (37.9%25 identity in 348 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF01032 FecCD_family%2C FecCD transport family;gbkey=CDS;gene=SCI51.26c;product=iron-siderophore uptake system transmembrane protein;protein_id=NP_626057.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1909695	1910582	.	-	.	ID=id2306;Dbxref=GeneID:1097217;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 351.20%2C E-value 1.1e-101;gbkey=misc_feature;gene=SCI51.26c
NC_003888.3	RefSeq	gene	1910795	1911841	.	-	.	ID=gene1784;Dbxref=GeneID:1097218;Name=SCI51.27c;gbkey=Gene;gene=SCI51.27c;gene_biotype=protein_coding;gene_synonym=SCI51.27c;locus_tag=SCO1787
NC_003888.3	RefSeq	CDS	1910795	1911841	.	-	0	ID=cds1752;Parent=gene1784;Dbxref=Genbank:NP_626058.1,GeneID:1097218;Name=NP_626058.1;Note=SCI51.27c%2C probable iron-siderophore uptake system transmembrane component%2C len: 348 aa%3B similar to many transmembrane components from binding-protein-dependent iron uptake systems using a range of siderophores e.g. SW:FEPD_ECOLI (EMBL:X57471)%2C fepD%2C Escherichia coli ferric enterobactin transport protein (334 aa)%2C fasta scores%3B opt: 910 z-score: 991.5 E(): 0%2C 46.0%25 identity in 326 aa overlap. Similar to neighbouring SCI51.26c%2C probable iron-siderophore uptake system transmembrane component (375 aa) (37.9%25 identity in 348 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF01032 FecCD_family%2C FecCD transport family;gbkey=CDS;gene=SCI51.27c;product=iron-siderophore uptake system transmembrane protein;protein_id=NP_626058.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1910810	1910814	.	-	.	ID=id2307;Dbxref=GeneID:1097218;Note=possible RBS;gbkey=RBS;gene=SCI51.27c
NC_003888.3	RefSeq	sequence_feature	1910816	1911703	.	-	.	ID=id2308;Dbxref=GeneID:1097218;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 368.20%2C E-value 8.7e-107;gbkey=misc_feature;gene=SCI51.27c
NC_003888.3	RefSeq	gene	1911986	1913017	.	-	.	ID=gene1785;Dbxref=GeneID:1097219;Name=SCI51.28c;gbkey=Gene;gene=SCI51.28c;gene_biotype=protein_coding;gene_synonym=SCI51.28c;locus_tag=SCO1788
NC_003888.3	RefSeq	CDS	1911986	1913017	.	-	0	ID=cds1753;Parent=gene1785;Dbxref=Genbank:NP_626059.1,GeneID:1097219;Name=NP_626059.1;Note=SCI51.28c%2C conserved hypothetical protein%2C len: 343 aa%3B unknown function%2C similar to other hypothetical proteins e.g. TR:O33194 (EMBL:Z98268) Mycobacterium tuberculosis hypothetical protein (353 aa)%2C fasta scores%3B opt: 768 z-score: 825.7 E(): 0%2C 44.8%25 identity in 315 aa overlap%2C with SCI51.28c. Also shows weak similarity to SW:NAGD_ECOLI (EMBL:X14135)%2C nagD%2C a CDS in the Escherichia coli N-acetylglucosamine operon (250 aa) (26.7%25 identity in 243 aa overlap) and to SW:PNPP_SCHPO (EMBL:X62722) Schizosaccharomyces pombe 4-nitrophenylphosphatase (unknown physiological substrate) (269 aa) (27.7%25 identity in 238 aa overlap);gbkey=CDS;gene=SCI51.28c;product=hypothetical protein;protein_id=NP_626059.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1913027	1913031	.	-	.	ID=id2309;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	1913090	1914382	.	+	.	ID=gene1786;Dbxref=GeneID:1097220;Name=SCI51.29;gbkey=Gene;gene=SCI51.29;gene_biotype=protein_coding;gene_synonym=SCI51.29;locus_tag=SCO1789
NC_003888.3	RefSeq	CDS	1913090	1914382	.	+	0	ID=cds1754;Parent=gene1786;Dbxref=Genbank:NP_626060.1,GeneID:1097220;Name=NP_626060.1;Note=SCI51.29%2C hypothetical protein%2C len: 430 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCI51.29;product=hypothetical protein;protein_id=NP_626060.1;transl_table=11
NC_003888.3	RefSeq	gene	1914468	1915100	.	-	.	ID=gene1787;Dbxref=GeneID:1097221;Name=SCI51.30c;gbkey=Gene;gene=SCI51.30c;gene_biotype=protein_coding;gene_synonym=SCI51.30c;locus_tag=SCO1790
NC_003888.3	RefSeq	CDS	1914468	1915100	.	-	0	ID=cds1755;Parent=gene1787;Dbxref=Genbank:NP_626061.1,GeneID:1097221;Name=NP_626061.1;Note=SCI51.30c%2C conserved hypothetical protein%2C len: 210 aa%3B unknown function%2C similar to part of TR:O33193 (EMBL:Z98268) Mycobacterium tuberculosis hypothetical protein (250 aa)%2C fasta scores%3B opt: 560 z-score: 665.7 E(): 1e-29%2C 49.7%25 identity in 185 aa overlap. The start codon is uncertain;gbkey=CDS;gene=SCI51.30c;product=hypothetical protein;protein_id=NP_626061.1;transl_table=11
NC_003888.3	RefSeq	gene	1915097	1916356	.	-	.	ID=gene1788;Dbxref=GeneID:1097222;Name=SCI51.31c;gbkey=Gene;gene=SCI51.31c;gene_biotype=protein_coding;gene_synonym=SCI51.31c;locus_tag=SCO1791
NC_003888.3	RefSeq	CDS	1915097	1916356	.	-	0	ID=cds1756;Parent=gene1788;Dbxref=Genbank:NP_626062.1,GeneID:1097222;Name=NP_626062.1;Note=SCI51.31c%2C hypothetical protein%2C len: 419 aa%3B unknown function%2C improbable CDS containing Thr- and Val-rich repeats and having a Ser- and Arg-rich C-terminus. Due to the unusual base composition in this region this assignment should be treated with caution;gbkey=CDS;gene=SCI51.31c;product=hypothetical protein;protein_id=NP_626062.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1915449	1915658	.	-	.	ID=id2310;Dbxref=GeneID:1097222;Note=repeat 1%3B approx. 15x degenerate direct repeats;gbkey=repeat_region;gene=SCI51.31c
NC_003888.3	RefSeq	repeat_region	1915671	1915821	.	-	.	ID=id2311;Dbxref=GeneID:1097222;Note=repeat 4%3B degenerate 151 bp direct repeat;gbkey=repeat_region;gene=SCI51.31c
NC_003888.3	RefSeq	repeat_region	1915844	1915899	.	-	.	ID=id2312;Dbxref=GeneID:1097222;Note=repeat 2%3B approx. 4x degenerate direct repeats%2C same repeating element as repeat 1;gbkey=repeat_region;gene=SCI51.31c
NC_003888.3	RefSeq	repeat_region	1915919	1915974	.	-	.	ID=id2313;Dbxref=GeneID:1097222;Note=repeat 3%3B approx. 4x degenerate direct repeats%2C same repeating element as repeat 1;gbkey=repeat_region;gene=SCI51.31c
NC_003888.3	RefSeq	repeat_region	1915992	1916142	.	-	.	ID=id2314;Dbxref=GeneID:1097222;Note=repeat 4%3B degenerate 151 bp direct repeat;gbkey=repeat_region;gene=SCI51.31c
NC_003888.3	RefSeq	stem_loop	1916397	1916441	.	-	.	ID=id2315;Note=stem%2C 20/20 (100%25) matches%2C 0 gaps%3B loop%2C 5 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1916451	1916571	.	-	.	ID=gene1789;Dbxref=GeneID:1097223;Name=rrnB;gbkey=Gene;gene=rrnB;gene_biotype=rRNA;locus_tag=SCOr04
NC_003888.3	RefSeq	rRNA	1916451	1916571	.	-	.	ID=rna11;Parent=gene1789;Dbxref=GeneID:1097223;Note=probable 5S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 5S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnB;product=5S ribosomal RNA
NC_003888.3	RefSeq	exon	1916451	1916571	.	-	.	ID=id2316;Parent=rna11;Dbxref=GeneID:1097223;Note=probable 5S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 5S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnB;product=5S ribosomal RNA
NC_003888.3	RefSeq	gene	1916673	1919795	.	-	.	ID=gene1790;Dbxref=GeneID:1097224;Name=rrnB;gbkey=Gene;gene=rrnB;gene_biotype=rRNA;locus_tag=SCOr05
NC_003888.3	RefSeq	rRNA	1916673	1919795	.	-	.	ID=rna12;Parent=gene1790;Dbxref=GeneID:1097224;Note=probable 23S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 23S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnB;product=23S ribosomal RNA
NC_003888.3	RefSeq	exon	1916673	1919795	.	-	.	ID=id2317;Parent=rna12;Dbxref=GeneID:1097224;Note=probable 23S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 23S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnB;product=23S ribosomal RNA
NC_003888.3	RefSeq	gene	1920072	1921599	.	-	.	ID=gene1791;Dbxref=GeneID:1097225;Name=rrnB;gbkey=Gene;gene=rrnB;gene_biotype=rRNA;locus_tag=SCOr06
NC_003888.3	RefSeq	rRNA	1920072	1921599	.	-	.	ID=rna13;Parent=gene1791;Dbxref=GeneID:1097225;Note=probable 16S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 16S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnB;product=16S ribosomal RNA
NC_003888.3	RefSeq	exon	1920072	1921599	.	-	.	ID=id2318;Parent=rna13;Dbxref=GeneID:1097225;Note=probable 16S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 16S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnB;product=16S ribosomal RNA
NC_003888.3	RefSeq	gene	1922128	1922769	.	-	.	ID=gene1792;Dbxref=GeneID:1097226;Name=SCI51.32c;gbkey=Gene;gene=SCI51.32c;gene_biotype=protein_coding;gene_synonym=SCI51.32c;locus_tag=SCO1792
NC_003888.3	RefSeq	CDS	1922128	1922769	.	-	0	ID=cds1757;Parent=gene1792;Dbxref=Genbank:NP_626063.1,GeneID:1097226;Name=NP_626063.1;Note=responsible for recognizing base lesions in the genome and initiating base excision DNA repair;gbkey=CDS;gene=SCI51.32c;product=3-methyladenine DNA glycosylase;protein_id=NP_626063.1;transl_table=11
NC_003888.3	RefSeq	gene	1922916	1923698	.	+	.	ID=gene1793;Dbxref=GeneID:1097227;Name=SCI5.01;gbkey=Gene;gene=SCI5.01;gene_biotype=protein_coding;gene_synonym=SCI5.01,SCI51.33;locus_tag=SCO1793
NC_003888.3	RefSeq	CDS	1922916	1923698	.	+	0	ID=cds1758;Parent=gene1793;Dbxref=Genbank:NP_733545.1,GeneID:1097227;Name=NP_733545.1;Note=SCI5.01%2C partial CDS%2C unknown%2C len: >195aa%3B similar to TR:O87735 (EMBL:D89936) sporulation control protein Spo0M from Bacillus subtilis (258 aa) fasta scores%3B opt: 283%2C z-score: 342.4%2C E(): 9.7e-12%2C (32.7%25 identity in 153 aa overlap).~SCI51.33%2C hypothetical protein%2C partial CDS%2C len: >98 aa%3B unknown function%2C similar to TR:O87735 (EMBL:D89936)%2C Spo0M%2C Bacillus subtilis sporulation-control protein (258 aa)%2C fasta scores%3B opt: 214 z-score: 268.2 E(): 1.4e-07%2C 34.8%25 identity in 92 aa overlap. Continues in cosmid I5 as SCI5.01 (EMBL:AL079332) S.coelicolor hypothetical protein (195 aa). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI5.01;product=hypothetical protein;protein_id=NP_733545.1;transl_table=11
NC_003888.3	RefSeq	gene	1923750	1924289	.	+	.	ID=gene1794;Dbxref=GeneID:1097228;Name=SCI5.02;gbkey=Gene;gene=SCI5.02;gene_biotype=protein_coding;gene_synonym=SCI5.02;locus_tag=SCO1794
NC_003888.3	RefSeq	CDS	1923750	1924289	.	+	0	ID=cds1759;Parent=gene1794;Dbxref=Genbank:NP_626064.1,GeneID:1097228;Name=NP_626064.1;Note=SCI5.02%2C conserved hypothetical protein%2C len: 179 aa%3B similar to many eg. TR:O06235 (EMBL:Z95388) hypothetical protein from Mycobacterium tuberculosis (176 aa) fasta scores%3B opt: 581%2C z-score: 658.0%2C E(): 2.6e-29%2C (52.9%25 identity in 172 aa overlap);gbkey=CDS;gene=SCI5.02;product=hypothetical protein;protein_id=NP_626064.1;transl_table=11
NC_003888.3	RefSeq	gene	1924446	1924952	.	+	.	ID=gene1795;Dbxref=GeneID:1097229;Name=SCI5.03;gbkey=Gene;gene=SCI5.03;gene_biotype=protein_coding;gene_synonym=SCI5.03;locus_tag=SCO1795
NC_003888.3	RefSeq	CDS	1924446	1924952	.	+	0	ID=cds1760;Parent=gene1795;Dbxref=Genbank:NP_626065.1,GeneID:1097229;Name=NP_626065.1;Note=SCI5.03%2C unknown%2C len: 168 aa%3B similar to TR:P72833 (EMBL:D90901) hypothetical protein from Synechocystis sp. PCC6803 (165 aa) fasta scores%3B opt: 417%2C z-score: 517.5%2C E(): 1.7e-21%2C (46.9%25 identity in 143 aa overlap);gbkey=CDS;gene=SCI5.03;product=hypothetical protein;protein_id=NP_626065.1;transl_table=11
NC_003888.3	RefSeq	gene	1925094	1926053	.	-	.	ID=gene1796;Dbxref=GeneID:1097230;Name=SCI5.04c;gbkey=Gene;gene=SCI5.04c;gene_biotype=protein_coding;gene_synonym=SCI5.04c;locus_tag=SCO1796
NC_003888.3	RefSeq	CDS	1925094	1926053	.	-	0	ID=cds1761;Parent=gene1796;Dbxref=Genbank:NP_626066.1,GeneID:1097230;Name=NP_626066.1;Note=SCI5.04c%2C hypothetical protein%2C len: 319 aa%3B similar to many e.g. SW:YS09_MYCTU hypothetical protein from Mycobacterium tuberculosis (381 aa) fasta scores%3B opt: 956%2C z-score: 915.0%2C E(): 0%2C 55.3%25 identity in 311 aa overlap. Contains Pfam match to PF01145 and Prosite match to PS01270 Band 7 protein family signature. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI5.04c;product=hypothetical protein;protein_id=NP_626066.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	1925360	1925500	.	+	.	ID=id2319;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	1925460	1926032	.	-	.	ID=id2320;Dbxref=GeneID:1097230;Note=Match to PF01145 Score 316.41.;gbkey=misc_feature;gene=SCI5.04c
NC_003888.3	RefSeq	sequence_feature	1925565	1925651	.	-	.	ID=id2321;Dbxref=GeneID:1097230;Note=PS01270 Band 7 protein family signature.;gbkey=misc_feature;gene=SCI5.04c
NC_003888.3	RefSeq	gene	1926231	1926662	.	-	.	ID=gene1797;Dbxref=GeneID:1097231;Name=SCI5.05c;gbkey=Gene;gene=SCI5.05c;gene_biotype=protein_coding;gene_synonym=SCI5.05c;locus_tag=SCO1797
NC_003888.3	RefSeq	CDS	1926231	1926662	.	-	0	ID=cds1762;Parent=gene1797;Dbxref=Genbank:NP_626067.1,GeneID:1097231;Name=NP_626067.1;Note=SCI5.05c%2C possible integral membrane protein%2C len: 143aa%3B similar to TR:P71767 (EMBL:Z79701) hypothetical protein from Mycobacterium tuberculosis (144 aa) fasta scores%3B opt: 344%2C z-score: 409.3%2C E(): 1.8e-15%2C (44.8%25 identity in 134 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI5.05c;product=hypothetical protein;protein_id=NP_626067.1;transl_table=11
NC_003888.3	RefSeq	gene	1926717	1927514	.	-	.	ID=gene1798;Dbxref=GeneID:1097232;Name=SCI5.06c;gbkey=Gene;gene=SCI5.06c;gene_biotype=protein_coding;gene_synonym=SCI5.06c;locus_tag=SCO1798
NC_003888.3	RefSeq	CDS	1926717	1927514	.	-	0	ID=cds1763;Parent=gene1798;Dbxref=Genbank:NP_626068.1,GeneID:1097232;Name=NP_626068.1;Note=SCI5.06c%2C possible ABC transporter ATP-binding subunit%2C len: 265aa%3B similar to many egs. TR:O53288 (EMBL:AL021287) predicted ABC transporter ATP-binding subunit (287 aa) fasta scores%3B opt: 893%2C z-score: 998.3%2C E(): 0%2C (53.3%25 identity in 257 aa overlap) and SW:LIVG_SALTY high-affinity branched-chain amino acid transporter from Salmonella typhimurium (255 aa) fasta scores%3B opt: 343%2C z-score: 390.2%2C E(): 2.1e-14%2C (31.0%25 identity in 248 aa overlap). Contains Pfam match to PF00005 ABC transporter transmembrane region and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCI5.06c;product=ABC transporter ATP-binding protein;protein_id=NP_626068.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1926846	1927427	.	-	.	ID=id2322;Dbxref=GeneID:1097232;Note=Match to PF00005 ABC transporter transmembrane region Score 160.89.;gbkey=misc_feature;gene=SCI5.06c
NC_003888.3	RefSeq	sequence_feature	1927383	1927406	.	-	.	ID=id2323;Dbxref=GeneID:1097232;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCI5.06c
NC_003888.3	RefSeq	gene	1927668	1928447	.	+	.	ID=gene1799;Dbxref=GeneID:1097233;Name=SCI5.07;gbkey=Gene;gene=SCI5.07;gene_biotype=protein_coding;gene_synonym=SCI5.07;locus_tag=SCO1799
NC_003888.3	RefSeq	CDS	1927668	1928447	.	+	0	ID=cds1764;Parent=gene1799;Dbxref=Genbank:NP_626069.1,GeneID:1097233;Name=NP_626069.1;Note=SCI5.07%2C unknown%2C len: 259 aa%3B similar to SW:YS07_MYCTU hypothetical protein from Mycobacterium tuberculosis (302 aa) fasta scores%3B opt: 131%2C z-score: 146.5%2C E(): 0.79%2C (32.3%25 identity in 279 aa overlap).;gbkey=CDS;gene=SCI5.07;product=hypothetical protein;protein_id=NP_626069.1;transl_table=11
NC_003888.3	RefSeq	gene	1928593	1928841	.	-	.	ID=gene1800;Dbxref=GeneID:1097234;Name=SCI5.08c;gbkey=Gene;gene=SCI5.08c;gene_biotype=protein_coding;gene_synonym=SCI5.08c;locus_tag=SCO1800
NC_003888.3	RefSeq	CDS	1928593	1928841	.	-	0	ID=cds1765;Parent=gene1800;Dbxref=Genbank:NP_626070.1,GeneID:1097234;Name=NP_626070.1;Note=SCI5.08c%2C possible small hypothetical protein%2C len: 82aa%3B contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCI5.08c;product=hypothetical protein;protein_id=NP_626070.1;transl_table=11
NC_003888.3	RefSeq	gene	1929011	1929643	.	-	.	ID=gene1801;Dbxref=GeneID:1097235;Name=SCI5.09c;gbkey=Gene;gene=SCI5.09c;gene_biotype=protein_coding;gene_synonym=SCI5.09c;locus_tag=SCO1801
NC_003888.3	RefSeq	CDS	1929011	1929643	.	-	0	ID=cds1766;Parent=gene1801;Dbxref=Genbank:NP_626071.1,GeneID:1097235;Name=NP_626071.1;Note=SCI5.09c%2C possible two component response regulator%2C len: 210aa%3B similar to many eg. TR:CAB42027 (EMBL:AL049754) two component response regulator from Streptomyces coelicolor (228 aa) fasta scores%3B opt: 622%2C z-score: 715.0%2C E(): 1.7e-32%2C (48.6%25 identity in 214 aa overlap) and SW:NARL_ECOLI nitrite/nitrate response regulator from Escherichia coli (216 aa) fasta scores%3B opt: 512%2C z-score: 591.0%2C E(): 1.4e-25%2C (39.9%25 identity in 203 aa overlap). Contains Pfam matches to PF00196 Bacterial regulatory proteins%2C luxR family and PF00072 Response regulator receiver domain%2C and Prosite match to PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains probable helix-turn-helix 165-186aa (+3.23 SD).;gbkey=CDS;gene=SCI5.09c;product=two component response regulator;protein_id=NP_626071.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1929014	1929208	.	-	.	ID=id2324;Dbxref=GeneID:1097235;Note=Match to PF00196 Bacterial regulatory proteins%2C luxR family Score 98.97.;gbkey=misc_feature;gene=SCI5.09c
NC_003888.3	RefSeq	sequence_feature	1929074	1929157	.	-	.	ID=id2325;Dbxref=GeneID:1097235;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=SCI5.09c
NC_003888.3	RefSeq	sequence_feature	1929299	1929640	.	-	.	ID=id2326;Dbxref=GeneID:1097235;Note=Match to PF00072 Response regulator receiver domain Score 157.46.;gbkey=misc_feature;gene=SCI5.09c
NC_003888.3	RefSeq	gene	1929645	1930823	.	-	.	ID=gene1802;Dbxref=GeneID:1097236;Name=SCI33.01c;gbkey=Gene;gene=SCI33.01c;gene_biotype=protein_coding;gene_synonym=SCI33.01c,SCI5.10c;locus_tag=SCO1802
NC_003888.3	RefSeq	CDS	1929645	1930823	.	-	0	ID=cds1767;Parent=gene1802;Dbxref=Genbank:NP_733546.1,GeneID:1097236;Name=NP_733546.1;Note=SCI33.01c%2C possible two-component system sensor kinase (fragment)%2C len: >383 aa%3B similar to N-terminal region of TR:Q9L1F1 (EMBL:AL157916) Streptomyces coelicolor two-component system sensor kinase SC3D11.11%2C 442 aa%3B fasta scores: opt: 406 z-score: 434.9 E(): 1.1e-16%3B 38.9%25 identity in 211 aa overlap. Contains Pfam matches to entries PF01590 GAF%2C GAF domain and PF02518 HATPase_c%2C GAF domain~SCI5.10c%2C partial CDS%2C possible two component sensor kinase%2C len: >41aa%3B similar to the C-terminus of many egs. TR:Q52558 (EMBL:U02041) VsrA%2C virulence regulator from Ralstonia solanacearum (502 aa) fasta scores%3B opt: 115%2C z-score: 182.8%2C E(): 0.0074%2C (51.4%25 identity in 35 aa overlap) and SW:DEGS_BACBR DegS%2C sensor kinase from Bacillus brevis (386 aa) fasta scores%3B opt: 111%2C z-score: 178.6%2C E(): 0.013%2C (44.1%25 identity in 34 aa overlap).;gbkey=CDS;gene=SCI33.01c;product=two-component system sensor kinase;protein_id=NP_733546.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1929675	1929932	.	-	.	ID=id2327;Dbxref=GeneID:1097236;Note=Pfam match to entry PF02518 HATPase_c%2C GAF domain%2C score 66.50%2C E-value 5.2e-17;gbkey=misc_feature;gene=SCI33.01c
NC_003888.3	RefSeq	sequence_feature	1930278	1930754	.	-	.	ID=id2328;Dbxref=GeneID:1097236;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 82.20%2C E-value 1.1e-20;gbkey=misc_feature;gene=SCI33.01c
NC_003888.3	RefSeq	ribosome_entry_site	1930825	1930829	.	-	.	ID=id2329;gbkey=RBS
NC_003888.3	RefSeq	gene	1931041	1931736	.	+	.	ID=gene1803;Dbxref=GeneID:1097237;Name=SCI33.02;gbkey=Gene;gene=SCI33.02;gene_biotype=protein_coding;gene_synonym=SCI33.02;locus_tag=SCO1803
NC_003888.3	RefSeq	CDS	1931041	1931736	.	+	0	ID=cds1768;Parent=gene1803;Dbxref=Genbank:NP_626072.1,GeneID:1097237;Name=NP_626072.1;Note=SCI33.02%2C possible oxidoreductase%2C len: 231 aa%3B similar to TR:Q9KAS7 (EMBL:AP001514) Bacillus halodurans 3-oxoacyl-(acyl-carrier-protein) reductase BH2210%2C 244 aa%3B fasta scores: opt: 369 z-score: 399.8 E(): 1e-14%3B 35.3%25 identity in 235 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCI33.02;product=oxidoreductase;protein_id=NP_626072.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1931044	1931598	.	+	.	ID=id2330;Dbxref=GeneID:1097237;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 118.60%2C E-value 1.2e-31;gbkey=misc_feature;gene=SCI33.02
NC_003888.3	RefSeq	sequence_feature	1931455	1931541	.	+	.	ID=id2331;Dbxref=GeneID:1097237;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCI33.02
NC_003888.3	RefSeq	ribosome_entry_site	1931724	1931728	.	+	.	ID=id2332;Dbxref=GeneID:1097237;gbkey=RBS;gene=SCI33.02
NC_003888.3	RefSeq	gene	1931736	1932812	.	+	.	ID=gene1804;Dbxref=GeneID:1097238;Name=SCI33.03;gbkey=Gene;gene=SCI33.03;gene_biotype=protein_coding;gene_synonym=SCI33.03;locus_tag=SCO1804
NC_003888.3	RefSeq	CDS	1931736	1932812	.	+	0	ID=cds1769;Parent=gene1804;Dbxref=Genbank:NP_626073.1,GeneID:1097238;Name=NP_626073.1;Note=SCI33.03%2C possible S-adenosylmethionine:tRNA ribosyltransferase-isomerase%2C len: 358 aa%3B similar to SW:QUEA_ECOLI (EMBL:M37702) Escherichia coli S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA%2C 356 aa%3B fasta scores: opt: 232 z-score: 260.0 E(): 6.3e-07%3B 27.6%25 identity in 373 aa overlap;gbkey=CDS;gene=SCI33.03;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=NP_626073.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1933151	1933154	.	+	.	ID=id2333;gbkey=RBS
NC_003888.3	RefSeq	gene	1933166	1933900	.	+	.	ID=gene1805;Dbxref=GeneID:1097239;Name=SCI33.04;gbkey=Gene;gene=SCI33.04;gene_biotype=protein_coding;gene_synonym=SCI33.04;locus_tag=SCO1805
NC_003888.3	RefSeq	CDS	1933166	1933900	.	+	0	ID=cds1770;Parent=gene1805;Dbxref=Genbank:NP_626074.1,GeneID:1097239;Name=NP_626074.1;Note=SCI33.04%2C possible membrane protein%2C len: 244 aa%3B C-terminal region highly similar to TR:Q9XAS4 (EMBL:AL078618) Streptomyces coelicolor hypothetical 17.2 kDa protein SC10A7.01%2C 163 aa%3B fasta scores: opt: 620 z-score: 633.5 E(): 9.9e-28%3B 63.1%25 identity in 157 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI33.04;product=hypothetical protein;protein_id=NP_626074.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1933418	1933522	.	+	.	ID=id2334;Dbxref=GeneID:1097239;Note=high content in alanine%2C glutamic acid and lysine amino acid residues;gbkey=misc_feature;gene=SCI33.04
NC_003888.3	RefSeq	gene	1934027	1936657	.	-	.	ID=gene1806;Dbxref=GeneID:1097240;Name=SCI33.05c;gbkey=Gene;gene=SCI33.05c;gene_biotype=protein_coding;gene_synonym=SCI33.05c;locus_tag=SCO1806
NC_003888.3	RefSeq	CDS	1934027	1936657	.	-	0	ID=cds1771;Parent=gene1806;Dbxref=Genbank:NP_626075.1,GeneID:1097240;Name=NP_626075.1;Note=SCI33.05c%2C conserved hypothetical protein%2C len: 876 aa%3B similar to TR:O65934 (EMBL:Z95890) Mycobacterium tuberculosis hypothetical 92.2 kDa protein MTCY28.10%2C 865 aa%3B fasta scores: opt: 1196 z-score: 907.2 E(): 0%3B 37.8%25 identity in 883 aa overlap and to TR:AAK46062 (EMBL:AE007039) Mycobacterium tuberculosis ABC transporter%2C ATP-binding protein MT1789%2C 863 aa%3B fasta scores: opt: 1196 Z-score: 892.8 E(): 4.3e-42%3B 37.826%25 identity in 883 aa overlap. Contains 2x Pfam matches to entry PF00498 FHA%2C FHA domain (N-terminal region) and Pfam match to entry PF00005 ABC_tran%2C ABC transporter (C-terminal region) and Prosite matches to entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains possible hydrophobic membrane spanning regions at C-terminal domain;gbkey=CDS;gene=SCI33.05c;product=ABC transporter ATP-binding protein;protein_id=NP_626075.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1935107	1935658	.	-	.	ID=id2335;Dbxref=GeneID:1097240;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 201.00%2C E-value 1.8e-56;gbkey=misc_feature;gene=SCI33.05c
NC_003888.3	RefSeq	sequence_feature	1935287	1935331	.	-	.	ID=id2336;Dbxref=GeneID:1097240;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCI33.05c
NC_003888.3	RefSeq	sequence_feature	1935614	1935637	.	-	.	ID=id2337;Dbxref=GeneID:1097240;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI33.05c
NC_003888.3	RefSeq	sequence_feature	1935800	1936003	.	-	.	ID=id2338;Dbxref=GeneID:1097240;Note=Pfam match to entry PF00498 FHA%2C FHA domain%2C score 71.50%2C E-value 1.8e-17;gbkey=misc_feature;gene=SCI33.05c
NC_003888.3	RefSeq	sequence_feature	1936045	1936378	.	-	.	ID=id2339;Dbxref=GeneID:1097240;Note=high content in alanine%2C glutamine and proline amino acid residues;gbkey=misc_feature;gene=SCI33.05c
NC_003888.3	RefSeq	sequence_feature	1936394	1936585	.	-	.	ID=id2340;Dbxref=GeneID:1097240;Note=Pfam match to entry PF00498 FHA%2C FHA domain%2C score 66.00%2C E-value 7.8e-16;gbkey=misc_feature;gene=SCI33.05c
NC_003888.3	RefSeq	gene	1936844	1938898	.	+	.	ID=gene1807;Dbxref=GeneID:1097241;Name=SCI28.01;gbkey=Gene;gene=SCI28.01;gene_biotype=protein_coding;gene_synonym=SCI28.01;locus_tag=SCO1807
NC_003888.3	RefSeq	CDS	1936844	1938898	.	+	0	ID=cds1772;Parent=gene1807;Dbxref=Genbank:NP_626076.1,GeneID:1097241;Name=NP_626076.1;Note=SCI28.01%2C possible integral membrane protein%2C len: 684 aa%3B similar to TR:Q9X7S6 (EMBL:AL049863) Streptomyces coelicolor  membrane protein SC5H1.18%2C 400 aa%3B fasta scores: opt: 550 Z-score: 394.9 E(): 2.3e-14%3B 36.636%25 identity in 434 aa overlap. Contains possible membrane spanning hydrophobic regions up to about 500 aa then a hydrophilic C-terminal tail;gbkey=CDS;gene=SCI28.01;product=hypothetical protein;protein_id=NP_626076.1;transl_table=11
NC_003888.3	RefSeq	gene	1939010	1940242	.	+	.	ID=gene1808;Dbxref=GeneID:1097242;Name=SCI28.02;gbkey=Gene;gene=SCI28.02;gene_biotype=protein_coding;gene_synonym=SCI28.02;locus_tag=SCO1808
NC_003888.3	RefSeq	CDS	1939010	1940242	.	+	0	ID=cds1773;Parent=gene1808;Dbxref=Genbank:NP_626077.1,GeneID:1097242;Name=NP_626077.1;Note=SCI28.02%2C possible phosphoserine phosphatase%2C len: 410 aa%3B similar to many e.g. SW:SERB_ECOLI phosphoserine phosphatase from Escherichia coli (322 aa) fasta scores%3B opt: 621%2C z-score: 674.7%2C E(): 3e-30%2C (49.8%25 identity in 219 aa overlap). Also similar to TR:O53289 (EMBL:AL021287) hypothetical protein from Mycobacterium tuberculosis (409 aa) fasta scores%3B opt: 1209%2C z-score: 1304.1%2C E(): 0%2C (51.8%25 identity in 400 aa overlap).;gbkey=CDS;gene=SCI28.02;product=phosphoserine phosphatase;protein_id=NP_626077.1;transl_table=11
NC_003888.3	RefSeq	gene	1940314	1940832	.	-	.	ID=gene1809;Dbxref=GeneID:1097243;Name=SCI28.03c;gbkey=Gene;gene=SCI28.03c;gene_biotype=protein_coding;gene_synonym=SCI28.03c;locus_tag=SCO1809
NC_003888.3	RefSeq	CDS	1940314	1940832	.	-	0	ID=cds1774;Parent=gene1809;Dbxref=Genbank:NP_626078.1,GeneID:1097243;Name=NP_626078.1;Note=SCI28.03c%2C unknown%2C len: 172aa%3B similar to SW:Y086_MYCTU hypothetical protein from Mycobacterium tuberculosis (158 aa) fasta scores%3B opt: 385%2C z-score: 471.9%2C E(): 5.9e-19%2C (43.5%25 identity in 161 aa overlap).;gbkey=CDS;gene=SCI28.03c;product=hypothetical protein;protein_id=NP_626078.1;transl_table=11
NC_003888.3	RefSeq	gene	1940925	1941131	.	-	.	ID=gene1810;Dbxref=GeneID:1097244;Name=SCI28.04c;gbkey=Gene;gene=SCI28.04c;gene_biotype=protein_coding;gene_synonym=SCI28.04c;locus_tag=SCO1810
NC_003888.3	RefSeq	CDS	1940925	1941131	.	-	0	ID=cds1775;Parent=gene1810;Dbxref=Genbank:NP_626079.1,GeneID:1097244;Name=NP_626079.1;Note=SCI28.04c%2C membrane protein%2C len: 68 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI28.04c;product=hypothetical protein;protein_id=NP_626079.1;transl_table=11
NC_003888.3	RefSeq	gene	1941315	1941431	.	-	.	ID=gene1811;Dbxref=GeneID:1097245;Name=SCI28.05c;gbkey=Gene;gene=SCI28.05c;gene_biotype=protein_coding;gene_synonym=SCI28.05c;locus_tag=SCO1811
NC_003888.3	RefSeq	CDS	1941315	1941431	.	-	0	ID=cds1776;Parent=gene1811;Dbxref=Genbank:NP_626080.1,GeneID:1097245;Name=NP_626080.1;Note=SCI28.05c%2C membrane protein%2C len: 38 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI28.05c;product=hypothetical protein;protein_id=NP_626080.1;transl_table=11
NC_003888.3	RefSeq	gene	1941516	1942781	.	-	.	ID=gene1812;Dbxref=GeneID:1097246;Name=SCI28.06c;gbkey=Gene;gene=SCI28.06c;gene_biotype=protein_coding;gene_synonym=SCI28.06c;locus_tag=SCO1812
NC_003888.3	RefSeq	CDS	1941516	1942781	.	-	0	ID=cds1777;Parent=gene1812;Dbxref=Genbank:NP_626081.1,GeneID:1097246;Name=NP_626081.1;Note=SCI28.06c%2C possible integral membrane transporter%2C len: 421aa%3B similar to SW:CYNX_ECOLI cyanate transport protein from Escherichia coli (384 aa) fasta scores%3B opt: 328%2C z-score: 364.0%2C E(): 6.1e-13%2C (28.0%25 identity in 386 aa overlap). Also similar to TR:O68332 (EMBL:AF033674) hypothetical protein from Pseudomonas marginalis pv. alfalfae (420 aa) fasta scores%3B opt: 521%2C z-score: 574.2%2C E(): 1.2e-24%2C (37.7%25 identity in 385 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI28.06c;product=integral membrane transporter;protein_id=NP_626081.1;transl_table=11
NC_003888.3	RefSeq	gene	1942957	1943649	.	+	.	ID=gene1813;Dbxref=GeneID:1097247;Name=SCI28.07;gbkey=Gene;gene=SCI28.07;gene_biotype=protein_coding;gene_synonym=SCI28.07;locus_tag=SCO1813
NC_003888.3	RefSeq	CDS	1942957	1943649	.	+	0	ID=cds1778;Parent=gene1813;Dbxref=Genbank:NP_626082.1,GeneID:1097247;Name=NP_626082.1;Note=SCI28.07%2C possible gntR-family transcriptional regulator%2C len: 230aa%3B similar to many eg. TR:O33960 (EMBL:U78309) pyruvate dehydrogenase complex repressor from Rhodobacter capsulatus (257 aa) fasta scores%3B opt: 326%2C z-score: 383.3%2C E(): 5.2e-14%2C (34.2%25 identity in 228 aa overlap). Also similar to TR:O68331 (EMBL:AF033674) hypothetical protein from Pseudomonas marginalis pv. alfalfae (217 aa) fasta scores%3B opt: 407%2C z-score: 476.9%2C E(): 3.1e-19%2C (40.4%25 identity in 166 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family.;gbkey=CDS;gene=SCI28.07;product=GntR family transcriptional regulator;protein_id=NP_626082.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1942999	1943178	.	+	.	ID=id2341;Dbxref=GeneID:1097247;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 88.10%2C E-value 1.1e-25.;gbkey=misc_feature;gene=SCI28.07
NC_003888.3	RefSeq	gene	1943738	1944505	.	-	.	ID=gene1814;Dbxref=GeneID:1097248;Name=inhA;gbkey=Gene;gene=inhA;gene_biotype=protein_coding;gene_synonym=inhA,SCI28.08c;locus_tag=SCO1814
NC_003888.3	RefSeq	CDS	1943738	1944505	.	-	0	ID=cds1779;Parent=gene1814;Dbxref=Genbank:NP_626083.1,GeneID:1097248;Name=NP_626083.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;gene=inhA;product=enoyl-ACP reductase;protein_id=NP_626083.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1943927	1944484	.	-	.	ID=id2342;Dbxref=GeneID:1097248;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 20.80%2C E-value 5.7e-07.;gbkey=misc_feature;gene=inhA
NC_003888.3	RefSeq	gene	1944511	1945215	.	-	.	ID=gene1815;Dbxref=GeneID:1097249;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;gene_synonym=fabG,SCI28.09c;locus_tag=SCO1815
NC_003888.3	RefSeq	CDS	1944511	1945215	.	-	0	ID=cds1780;Parent=gene1815;Dbxref=Genbank:NP_626084.1,GeneID:1097249;Name=NP_626084.1;gbkey=CDS;gene=fabG;product=3-oxacyl-ACP reductase;protein_id=NP_626084.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1944538	1944630	.	-	.	ID=id2343;Dbxref=GeneID:1097249;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 59.10%2C E-value 9.5e-14.;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	1944688	1945209	.	-	.	ID=id2344;Dbxref=GeneID:1097249;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 226.90%2C E-value 3e-64.;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	1944751	1944837	.	-	.	ID=id2345;Dbxref=GeneID:1097249;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	gene	1945493	1947016	.	+	.	ID=gene1816;Dbxref=GeneID:1097250;Name=SCI28.10;gbkey=Gene;gene=SCI28.10;gene_biotype=protein_coding;gene_synonym=SCI28.10,SCI8.01;locus_tag=SCO1816
NC_003888.3	RefSeq	CDS	1945493	1947016	.	+	0	ID=cds1781;Parent=gene1816;Dbxref=Genbank:NP_733547.1,GeneID:1097250;Name=NP_733547.1;Note=SCI8.01%2C unknown%2C partial CDS%2C len: > 104 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR:P71897 (EMBL%3B Z79702) hypothetical 54.6 KD protein (505 aa)%2C fasta scores opt: 596 z-score: 748.3 E(): 0 79.6%25 identity in 103 aa overlap. Overlaps and extends into CDS SCI28.10 on the adjoining cosmid~SCI28.10%2C partial CDS%2C unknown%2C len: >435aa%3B similar to many of undefined function egs. TR:P71897 (EMBL:Z79702) hypothetical protein from Mycobacterium tuberculosis (505 aa) fasta scores%3B opt: 1767%2C z-score: 2036.8%2C E(): 0%2C (63.3%25 identity in 431 aa overlap) and SW:TLDD_ECOLI TldD protein from Escherichia coli (481 aa) fasta scores%3B opt: 327%2C z-score: 379.0%2C E(): 8.9e-14%2C (28.0%25 identity in 415 aa overlap).;gbkey=CDS;gene=SCI28.10;product=hypothetical protein;protein_id=NP_733547.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1947000	1947005	.	+	.	ID=id2346;Dbxref=GeneID:1097250;gbkey=RBS;gene=SCI28.10
NC_003888.3	RefSeq	gene	1947013	1948407	.	+	.	ID=gene1817;Dbxref=GeneID:1097251;Name=SCI8.02;gbkey=Gene;gene=SCI8.02;gene_biotype=protein_coding;gene_synonym=SCI8.02;locus_tag=SCO1817
NC_003888.3	RefSeq	CDS	1947013	1948407	.	+	0	ID=cds1782;Parent=gene1817;Dbxref=Genbank:NP_626085.1,GeneID:1097251;Name=NP_626085.1;Note=SCI8.02%2C unknown%2C len: 464 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR: P71898 (EMBL%3B Z79702) hypothetical 48.7 KD protein MTCY3G12.20 (457 aa)%2C fasta scores opt: 1485 z-score: 1670.5 E():0 53.5%25 identity in 454 aa overlap. Contains a Pfam match to entry PF01523 PmbA_TldD%2C  modulator of DNA gyrase.;gbkey=CDS;gene=SCI8.02;product=hypothetical protein;protein_id=NP_626085.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1947076	1947993	.	+	.	ID=id2347;Dbxref=GeneID:1097251;Note=Pfam match to entry PF01523 PmbA_TldD%2C  modulator of DNA gyrase%2C score -50.00%2C E-value 0.0044;gbkey=misc_feature;gene=SCI8.02
NC_003888.3	RefSeq	ribosome_entry_site	1948436	1948441	.	+	.	ID=id2348;gbkey=RBS
NC_003888.3	RefSeq	gene	1948453	1949721	.	+	.	ID=gene1818;Dbxref=GeneID:1097252;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;gene_synonym=tyrS;locus_tag=SCO1818
NC_003888.3	RefSeq	CDS	1948453	1949721	.	+	0	ID=cds1783;Parent=gene1818;Dbxref=Genbank:NP_626086.1,GeneID:1097252;Name=NP_626086.1;Note=SCI8.03%2C tyrS%2C tyrosyl-tRNA synthetase (EC 6.1.1.1)%2C len: 422 aa. Highly similar to many tyrosyl-tRNA synthetases e.g. Escherichia coli SW:SYY_ECOLI (EMBL: J01719) (423 aa)%2C fasta scores opt: 1317 z-score: 1463.3 E():0 48.6%25 identity in 416 aa overlap and Mycobacterium tuberculosis SW:SYY_MYCTU (EMBL: Z98268) (424 aa)%2C fasta scores opt: 1657 z-score: 1839.8 E():0 60.7%25 identity in 422 aa overlap. Contains a Prosite hit to PS00178 Aminoacyl-transfer RNA synthetases class-I signature and a Pfam match to entry PF00579 tRNA-synt_1b%2C tRNA synthetases class I (W and Y).;gbkey=CDS;gene=tyrS;product=tyrosyl-tRNA synthetase;protein_id=NP_626086.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1948552	1949238	.	+	.	ID=id2349;Dbxref=GeneID:1097252;Note=Pfam match to entry PF00579 tRNA-synt_1b%2C tRNA synthetases class I (W and Y)%2C score 293.00%2C E-value 3.7e-84;gbkey=misc_feature;gene=tyrS
NC_003888.3	RefSeq	sequence_feature	1948570	1948602	.	+	.	ID=id2350;Dbxref=GeneID:1097252;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=tyrS
NC_003888.3	RefSeq	gene	1949812	1950093	.	-	.	ID=gene1819;Dbxref=GeneID:1097253;Name=SCI8.04c;gbkey=Gene;gene=SCI8.04c;gene_biotype=protein_coding;gene_synonym=SCI8.04c;locus_tag=SCO1819
NC_003888.3	RefSeq	CDS	1949812	1950093	.	-	0	ID=cds1784;Parent=gene1819;Dbxref=Genbank:NP_626087.1,GeneID:1097253;Name=NP_626087.1;Note=SCI8.04c%2C possible integral membrane protein%2C len: 93 aa. Similar to Streptomyces coelicolor TR:CAB42957 (EMBL: AL049863) possible membrane protein SC5H1.32 (89 aa)%2C fasta scores opt: 180 z-score: 240.4 E(): 5.1e-06 34.2%25 identity in 76 aa overlap and Escherichia coli SW:TAG1_ECOLI (EMBL: U85771) transglycosylase associated protein (84 aa)%2C fasta scores opt: 166 z-score: 223.5 E(): 4.4e-05 36.4%25 identity in 77 aa overlap. Contains a possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCI8.04c;product=hypothetical protein;protein_id=NP_626087.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1950099	1950104	.	-	.	ID=id2351;gbkey=RBS
NC_003888.3	RefSeq	gene	1950275	1950754	.	+	.	ID=gene1820;Dbxref=GeneID:1097254;Name=SCI8.05;gbkey=Gene;gene=SCI8.05;gene_biotype=protein_coding;gene_synonym=SCI8.05;locus_tag=SCO1820
NC_003888.3	RefSeq	CDS	1950275	1950754	.	+	0	ID=cds1785;Parent=gene1820;Dbxref=Genbank:NP_626088.1,GeneID:1097254;Name=NP_626088.1;Note=SCI8.05%2C possible integral membrane protein%2C len: 159 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCI8.05;product=hypothetical protein;protein_id=NP_626088.1;transl_table=11
NC_003888.3	RefSeq	gene	1951220	1952245	.	-	.	ID=gene1821;Dbxref=GeneID:1097255;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=SCO1821
NC_003888.3	RefSeq	CDS	1951220	1952245	.	-	0	ID=cds1786;Parent=gene1821;Dbxref=Genbank:NP_626089.1,GeneID:1097255;Name=NP_626089.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=molybdenum cofactor biosynthesis protein A;protein_id=NP_626089.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1951400	1952053	.	-	.	ID=id2352;Dbxref=GeneID:1097255;Note=Pfam match to entry PF01444 MoaA_NifB_PqqE%2C moaA / nifB / pqqE family%2C score 220.90%2C E-value 1.9e-62;gbkey=misc_feature;gene=moaA
NC_003888.3	RefSeq	sequence_feature	1952126	1952161	.	-	.	ID=id2353;Dbxref=GeneID:1097255;Note=PS01305 moaA / nifB / pqqE family signature;gbkey=misc_feature;gene=moaA
NC_003888.3	RefSeq	ribosome_entry_site	1952252	1952256	.	-	.	ID=id2354;gbkey=RBS
NC_003888.3	RefSeq	gene	1952378	1954012	.	-	.	ID=gene1822;Dbxref=GeneID:1097256;Name=SCI8.07c;gbkey=Gene;gene=SCI8.07c;gene_biotype=protein_coding;gene_synonym=SCI8.07c;locus_tag=SCO1822
NC_003888.3	RefSeq	CDS	1952378	1954012	.	-	0	ID=cds1787;Parent=gene1822;Dbxref=Genbank:NP_626090.1,GeneID:1097256;Name=NP_626090.1;Note=SCI8.07c%2C possible transmembrane transport protein%2C len: 544 aa. A member of the sodium:solute symporter family it is similar to many including: Streptomyces coelicolor TR:O70003 (EMBL: AL022374)  transmembrane transport SC5B8.17 (530 aa)%2C fasta scores opt: 2215 z-score: 2454.2 E(): 0 64.5%25 identity in 527 aa overlap and Pseudomonas putida TR:O50471 (EMBL: Z71176) phenylacetic acid permease (520 aa)%2C fasta scores opt: 1004 z-score: 1114.3 E():0 46.3%25 identity in 527 aa overlap. Contains a Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCI8.07c;product=transmembrane transport protein;protein_id=NP_626090.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1952612	1953859	.	-	.	ID=id2355;Dbxref=GeneID:1097256;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score 388.20%2C E-value 8.1e-113;gbkey=misc_feature;gene=SCI8.07c
NC_003888.3	RefSeq	gene	1954009	1954383	.	-	.	ID=gene1823;Dbxref=GeneID:1097257;Name=SCI8.08c;gbkey=Gene;gene=SCI8.08c;gene_biotype=protein_coding;gene_synonym=SCI8.08c;locus_tag=SCO1823
NC_003888.3	RefSeq	CDS	1954009	1954383	.	-	0	ID=cds1788;Parent=gene1823;Dbxref=Genbank:NP_626091.1,GeneID:1097257;Name=NP_626091.1;Note=SCI8.08c%2C possible integral membrane protein%2C len: 124 aa. Similar to the C-terminus of Streptomyces coelicolor TR:O70002 (EMBL: AL022374) hypothetical 20.6 KD protein SC5B8.16 (192 aa)%2C fasta scores opt: 268 z-score: 343.6 E(): 9.1e-12 36.9%25 identity in 111 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCI8.08c;product=hypothetical protein;protein_id=NP_626091.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1954020	1954024	.	-	.	ID=id2356;Dbxref=GeneID:1097257;gbkey=RBS;gene=SCI8.08c
NC_003888.3	RefSeq	ribosome_entry_site	1954389	1954393	.	-	.	ID=id2357;gbkey=RBS
NC_003888.3	RefSeq	gene	1954737	1956275	.	+	.	ID=gene1824;Dbxref=GeneID:1097258;Name=ssp;gbkey=Gene;gene=ssp;gene_biotype=protein_coding;gene_synonym=ssp;locus_tag=SCO1824
NC_003888.3	RefSeq	CDS	1954737	1956275	.	+	0	ID=cds1789;Parent=gene1824;Dbxref=Genbank:NP_626092.1,GeneID:1097258;Name=NP_626092.1;Note=SCI8.09%2C ssp%2C  subtilisin-like protease%2C len: 512 aa. Almost identical to the Streptomyces lividans TR:Q54400 (EMBL: L41655) subtilisin-like protease precursor (512 aa)%2C fasta scores opt: 3375 z-score: 3428.7 E(): 0 99.6%25 identity in 512 aa overlap. Contains a Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family and Prosite hits to PS00137 Serine proteases%2C subtilase family%2C histidine active site%2C PS00138 Serine proteases%2C subtilase family%2C serine active site and PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site. Also contains a possible N-terminal signal sequence.;gbkey=CDS;gene=ssp;product=subtilisin-like protease;protein_id=NP_626092.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1955181	1956128	.	+	.	ID=id2358;Dbxref=GeneID:1097258;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 178.90%2C E-value 8.5e-50;gbkey=misc_feature;gene=ssp
NC_003888.3	RefSeq	sequence_feature	1955274	1955309	.	+	.	ID=id2359;Dbxref=GeneID:1097258;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=ssp
NC_003888.3	RefSeq	sequence_feature	1955415	1955447	.	+	.	ID=id2360;Dbxref=GeneID:1097258;Note=PS00137 Serine proteases%2C subtilase family%2C histidine active site;gbkey=misc_feature;gene=ssp
NC_003888.3	RefSeq	sequence_feature	1956033	1956065	.	+	.	ID=id2361;Dbxref=GeneID:1097258;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site;gbkey=misc_feature;gene=ssp
NC_003888.3	RefSeq	gene	1956291	1956929	.	+	.	ID=gene1825;Dbxref=GeneID:1097259;Name=SCI8.10;gbkey=Gene;gene=SCI8.10;gene_biotype=protein_coding;gene_synonym=SCI8.10;locus_tag=SCO1825
NC_003888.3	RefSeq	CDS	1956291	1956929	.	+	0	ID=cds1790;Parent=gene1825;Dbxref=Genbank:NP_626093.1,GeneID:1097259;Name=NP_626093.1;Note=SCI8.10%2C possible membrane protein%2C len: 212 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCI8.10;product=hypothetical protein;protein_id=NP_626093.1;transl_table=11
NC_003888.3	RefSeq	gene	1956980	1957987	.	+	.	ID=gene1826;Dbxref=GeneID:1097260;Name=SCI8.11;gbkey=Gene;gene=SCI8.11;gene_biotype=protein_coding;gene_synonym=SCI8.11;locus_tag=SCO1826
NC_003888.3	RefSeq	CDS	1956980	1957987	.	+	0	ID=cds1791;Parent=gene1826;Dbxref=Genbank:NP_626094.1,GeneID:1097260;Name=NP_626094.1;Note=SCI8.11%2C possible membrane protein%2C len: 335 aa. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCI8.11;product=hypothetical protein;protein_id=NP_626094.1;transl_table=11
NC_003888.3	RefSeq	gene	1958139	1959125	.	+	.	ID=gene1827;Dbxref=GeneID:1097261;Name=SCI8.12;gbkey=Gene;gene=SCI8.12;gene_biotype=protein_coding;gene_synonym=SCI8.12;locus_tag=SCO1827
NC_003888.3	RefSeq	CDS	1958139	1959125	.	+	0	ID=cds1792;Parent=gene1827;Dbxref=Genbank:NP_626095.1,GeneID:1097261;Name=NP_626095.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;gene=SCI8.12;product=DNA polymerase III subunit epsilon;protein_id=NP_626095.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1958202	1958714	.	+	.	ID=id2362;Dbxref=GeneID:1097261;Note=Pfam match to entry PF00929 Exonuclease%2C Exonuclease%2C score 83.10%2C E-value 5.8e-21;gbkey=misc_feature;gene=SCI8.12
NC_003888.3	RefSeq	gene	1959189	1959422	.	+	.	ID=gene1828;Dbxref=GeneID:1097262;Name=SCI8.13;gbkey=Gene;gene=SCI8.13;gene_biotype=protein_coding;gene_synonym=SCI8.13;locus_tag=SCO1828
NC_003888.3	RefSeq	CDS	1959189	1959422	.	+	0	ID=cds1793;Parent=gene1828;Dbxref=Genbank:NP_626096.1,GeneID:1097262;Name=NP_626096.1;Note=SCI8.13%2C unknown%2C len: 77 aa.;gbkey=CDS;gene=SCI8.13;product=hypothetical protein;protein_id=NP_626096.1;transl_table=11
NC_003888.3	RefSeq	gene	1959486	1960358	.	+	.	ID=gene1829;Dbxref=GeneID:1097263;Name=SCI8.14;gbkey=Gene;gene=SCI8.14;gene_biotype=protein_coding;gene_synonym=SCI8.14;locus_tag=SCO1829
NC_003888.3	RefSeq	CDS	1959486	1960358	.	+	0	ID=cds1794;Parent=gene1829;Dbxref=Genbank:NP_626097.1,GeneID:1097263;Name=NP_626097.1;Note=SCI8.14%2C possible membrane protein%2C len: 290 aa. Weakly similar to several proteins of undefined function e.g. Streptomyces coelicolor TR:CAB45478 (EMBL: AL079348) hypothetical 30.3 KD protein SC66T3.22 (278 aa)%2C fasta scores opt: 394 z-score: 463.3 E(): 1.9e-18 33.8%25 identity in 272 aa overlap and Mycobacterium leprae TR:O69480 (EMBL: AL023635) hypothetical 30.0 KD protein (270 aa)%2C fasta scores opt: 392 z-score: 461.2 E(): 2.5e-18 30.7%25 identity in 270 aa overlap. Note it is possible that codon 28 may be the true translational start site. Contains a possible membrane spanning hydrophobic domain;gbkey=CDS;gene=SCI8.14;product=hypothetical protein;protein_id=NP_626097.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1960413	1960417	.	+	.	ID=id2363;gbkey=RBS
NC_003888.3	RefSeq	gene	1960424	1962211	.	+	.	ID=gene1830;Dbxref=GeneID:1097264;Name=SCI8.15;gbkey=Gene;gene=SCI8.15;gene_biotype=protein_coding;gene_synonym=SCI8.15;locus_tag=SCO1830
NC_003888.3	RefSeq	CDS	1960424	1962211	.	+	0	ID=cds1795;Parent=gene1830;Dbxref=Genbank:NP_626098.1,GeneID:1097264;Name=NP_626098.1;Note=SCI8.15%2C unknown%2C len: 595 aa. Similar to several proteins of unknown function from Streptomyces coelicolor%2C including TR:CAB52841 (EMBL: AL109848) hypothetical 68.4 KD protein SCI51.17 (612 aa)%2C fasta scores pt: 2473 z-score: 2932.7 E(): 0 60.7%25 identity in 596 aa overlap and TR:CAB42080 (EMBL: AL049763) conserved hypothetical protein SCE36.11C (612 aa) fasta scores opt: 1389 z-score: 1396.7 E():0 45.8%25 identity in 605 aa overlap. As well as Mycobacterium tuberculosis TR:P71741 (EMBL%3B Z81368) hypothetical 72.7 KD protein (642 aa)%2C fasta scores opt: 1152 z-score: 1364.6 E(): 0 39.9%25 identity in 622 aa overlap.;gbkey=CDS;gene=SCI8.15;product=hypothetical protein;protein_id=NP_626098.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1962198	1962203	.	+	.	ID=id2364;Dbxref=GeneID:1097264;gbkey=RBS;gene=SCI8.15
NC_003888.3	RefSeq	gene	1962217	1962972	.	+	.	ID=gene1831;Dbxref=GeneID:1097265;Name=SCI8.16;gbkey=Gene;gene=SCI8.16;gene_biotype=protein_coding;gene_synonym=SCI8.16;locus_tag=SCO1831
NC_003888.3	RefSeq	CDS	1962217	1962972	.	+	0	ID=cds1796;Parent=gene1831;Dbxref=Genbank:NP_626099.1,GeneID:1097265;Name=NP_626099.1;Note=SCI8.16%2C possible oxidoreductase%2C len: 251 aa. Similar to several including Streptomyces coelicolor TR:CAB52925 (EMBL: AL109949) oxidoreductase SCJ11.40 (250 aa)%2C fasta scores opt: 462 z-score: 489.9 E(): 6.4e-20 33.9%25 identity in 248 aa overlap and Bacillus megaterium SW:DHG2_BACME (EMBL: D90044) glucose 1-dehydrogenase II (EC 1.1.1.47) (GLCDH-II) (261 aa)%2C fasta scores opt: 412 z-score: 437.9 E(): 5e-17 34.6%25 identity in 254 aa overlap. Contains Pfam matches to entry PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus.;gbkey=CDS;gene=SCI8.16;product=oxidoreductase;protein_id=NP_626099.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1962238	1962777	.	+	.	ID=id2365;Dbxref=GeneID:1097265;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 113.60%2C E-value 3.8e-30;gbkey=misc_feature;gene=SCI8.16
NC_003888.3	RefSeq	sequence_feature	1962853	1962945	.	+	.	ID=id2366;Dbxref=GeneID:1097265;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 41.90%2C E-value 1.4e-08;gbkey=misc_feature;gene=SCI8.16
NC_003888.3	RefSeq	gene	1963007	1963594	.	-	.	ID=gene1832;Dbxref=GeneID:1097266;Name=SCI8.17c;gbkey=Gene;gene=SCI8.17c;gene_biotype=protein_coding;gene_synonym=SCI8.17c;locus_tag=SCO1832
NC_003888.3	RefSeq	CDS	1963007	1963594	.	-	0	ID=cds1797;Parent=gene1832;Dbxref=Genbank:NP_626100.1,GeneID:1097266;Name=NP_626100.1;Note=SCI8.17c%2C possible membrane protein%2C len: 192 aa. Contains a possible N-terminal signal sequence and a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCI8.17c;product=hypothetical protein;protein_id=NP_626100.1;transl_table=11
NC_003888.3	RefSeq	gene	1963591	1964112	.	-	.	ID=gene1833;Dbxref=GeneID:1097267;Name=SCI8.18c;gbkey=Gene;gene=SCI8.18c;gene_biotype=protein_coding;gene_synonym=SCI8.18c;locus_tag=SCO1833
NC_003888.3	RefSeq	CDS	1963591	1964112	.	-	0	ID=cds1798;Parent=gene1833;Dbxref=Genbank:NP_626101.1,GeneID:1097267;Name=NP_626101.1;Note=SCI8.18c%2C possible membrane protein%2C len: 226 aa. Contains a possible N-terminal signal sequence and a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCI8.18c;product=hypothetical protein;protein_id=NP_626101.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1963596	1963599	.	-	.	ID=id2367;Dbxref=GeneID:1097267;gbkey=RBS;gene=SCI8.18c
NC_003888.3	RefSeq	gene	1964268	1964651	.	-	.	ID=gene1834;Dbxref=GeneID:1097268;Name=SCI8.19c;gbkey=Gene;gene=SCI8.19c;gene_biotype=protein_coding;gene_synonym=SCI8.19c;locus_tag=SCO1834
NC_003888.3	RefSeq	CDS	1964268	1964651	.	-	0	ID=cds1799;Parent=gene1834;Dbxref=Genbank:NP_626102.1,GeneID:1097268;Name=NP_626102.1;Note=SCI8.19c%2C unknown%2C len: %2C124 aa.;gbkey=CDS;gene=SCI8.19c;product=hypothetical protein;protein_id=NP_626102.1;transl_table=11
NC_003888.3	RefSeq	gene	1964648	1964833	.	-	.	ID=gene1835;Dbxref=GeneID:1097269;Name=SCI8.20c;gbkey=Gene;gene=SCI8.20c;gene_biotype=protein_coding;gene_synonym=SCI8.20c;locus_tag=SCO1835
NC_003888.3	RefSeq	CDS	1964648	1964833	.	-	0	ID=cds1800;Parent=gene1835;Dbxref=Genbank:NP_626103.1,GeneID:1097269;Name=NP_626103.1;Note=SCI8.20c%2C possible membrane protein%2C len: 61 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCI8.20c;product=hypothetical protein;protein_id=NP_626103.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1964844	1964847	.	-	.	ID=id2368;gbkey=RBS
NC_003888.3	RefSeq	gene	1964896	1965378	.	-	.	ID=gene1836;Dbxref=GeneID:1097270;Name=SCI8.21c.;gbkey=Gene;gene=SCI8.21c.;gene_biotype=protein_coding;gene_synonym=SCI8.21c.;locus_tag=SCO1836
NC_003888.3	RefSeq	CDS	1964896	1965378	.	-	0	ID=cds1801;Parent=gene1836;Dbxref=Genbank:NP_626104.1,GeneID:1097270;Name=NP_626104.1;Note=SCI8.21c%2C possible stress-like protein%2C len: 160 aa. Similar to several stress proteins e.g. Staphylococcus aureus TR:Q53485 (EMBL: S76213) alkaline shock protein 23 (169 aa)%2C fasta scores opt: 303 z-score: 340.6 E(): 1.3e-11 39.3%25 identity in 150 aa overlap and Enterococcus faecalis TR:O32593 (EMBL: AJ000042) Gls24 general stress protein (180 aa)%2C fasta scores opt: 218 z-score: 249.4 E(): 1.6e-06 31.7%25 identity in 126 aa overlap.;gbkey=CDS;gene=SCI8.21c.;product=stress-like protein;protein_id=NP_626104.1;transl_table=11
NC_003888.3	RefSeq	gene	1965466	1966254	.	+	.	ID=gene1837;Dbxref=GeneID:1097271;Name=SCI8.22;gbkey=Gene;gene=SCI8.22;gene_biotype=protein_coding;gene_synonym=SCI8.22;locus_tag=SCO1837
NC_003888.3	RefSeq	CDS	1965466	1966254	.	+	0	ID=cds1802;Parent=gene1837;Dbxref=Genbank:NP_626105.1,GeneID:1097271;Name=NP_626105.1;Note=SCI8.22%2C unknown%2C len: 262 aa.;gbkey=CDS;gene=SCI8.22;product=hypothetical protein;protein_id=NP_626105.1;transl_table=11
NC_003888.3	RefSeq	gene	1966275	1967078	.	-	.	ID=gene1838;Dbxref=GeneID:1097272;Name=SCI8.23c;gbkey=Gene;gene=SCI8.23c;gene_biotype=protein_coding;gene_synonym=SCI8.23c;locus_tag=SCO1838
NC_003888.3	RefSeq	CDS	1966275	1967078	.	-	0	ID=cds1803;Parent=gene1838;Dbxref=Genbank:NP_626106.1,GeneID:1097272;Name=NP_626106.1;Note=SCI8.23c%2C possible enoyl-CoA hydratase/isomerase%2C len: 267 aa. Similar to many including: Mycobacterium tuberculosis TR:P75019 (EMBL: Z80343) hypothetical 29.1 KD protein (274 aa)%2C fasta scores opt: 331 z-score: 381.9 E(): 6.7e-14 33.9%25 identity in 236 aa overlap and Pseudomonas fluorescens TR:O69762 (EMBL: Y13067) P-hydroxycinnamoyl CoA hydratase/lyase (276 aa)%2C fasta scores opt: 278 z-score: 322.1 E(): 1.4e-10 29.7%25 identity in 212 aa overlap. Contains a Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family and a Prosite hit to PS00166 Enoyl-CoA hydratase/isomerase signature.;gbkey=CDS;gene=SCI8.23c;product=enoyl-CoA hydratase/isomerase;protein_id=NP_626106.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1966461	1967003	.	-	.	ID=id2369;Dbxref=GeneID:1097272;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 110.60%2C E-value 3e-29;gbkey=misc_feature;gene=SCI8.23c
NC_003888.3	RefSeq	sequence_feature	1966650	1966712	.	-	.	ID=id2370;Dbxref=GeneID:1097272;Note=PS00166 Enoyl-CoA hydratase/isomerase signature;gbkey=misc_feature;gene=SCI8.23c
NC_003888.3	RefSeq	ribosome_entry_site	1967085	1967089	.	-	.	ID=id2371;gbkey=RBS
NC_003888.3	RefSeq	gene	1967236	1967457	.	-	.	ID=gene1839;Dbxref=GeneID:1097273;Name=SCI8.24c;gbkey=Gene;gene=SCI8.24c;gene_biotype=protein_coding;gene_synonym=SCI8.24c;locus_tag=SCO1839
NC_003888.3	RefSeq	CDS	1967236	1967457	.	-	0	ID=cds1804;Parent=gene1839;Dbxref=Genbank:NP_626107.1,GeneID:1097273;Name=NP_626107.1;Note=SCI8.24c%2C possible transcriptional regulator%2C len: 73 aa. Contains a possible helix-turn-helix motif between residues 32..53 (+3.35 SD).;gbkey=CDS;gene=SCI8.24c;product=transcriptional regulator;protein_id=NP_626107.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1967463	1967467	.	-	.	ID=id2372;gbkey=RBS
NC_003888.3	RefSeq	gene	1967794	1969392	.	-	.	ID=gene1840;Dbxref=GeneID:1097274;Name=SCI8.25c;gbkey=Gene;gene=SCI8.25c;gene_biotype=protein_coding;gene_synonym=SCI8.25c;locus_tag=SCO1840
NC_003888.3	RefSeq	CDS	1967794	1969392	.	-	0	ID=cds1805;Parent=gene1840;Dbxref=Genbank:NP_626108.1,GeneID:1097274;Name=NP_626108.1;Note=SCI8.25c%2C probable ABC transporter%2C ATP binding subunit%2C len: 532 aa. Highly similar to many e.g. Mycobacterium tuberculosis TR:O53164 (EMBL: AL021184) ABC transporter ATP binding protein (542 aa)%2C fasta scores opt: 2213 z-score: 2308.8 E():0 63.5%25 identity in 542 aa overlap and Escherichia coli SW: YBIT_ECOLI (EMBL: AE000184) ABC transporter ATP-binding protein (530 aa)%2C fasta scores opt: 921 z-score: 963.6 E():0 33.5%25 identity in 534 aa overlap. Contains 2xPfam match to entry PF00005 ABC_tran ABC transporter. In addition to Prosite hits to 2xPS00017 ATP/GTP-binding site motif A (P-loop) and 2xPS00211 ABC transporters family signature. Also contains a probable coiled-coil from 250 to 286 (37 residues).;gbkey=CDS;gene=SCI8.25c;product=ABC transporter ATP-binding protein;protein_id=NP_626108.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1967845	1968342	.	-	.	ID=id2373;Dbxref=GeneID:1097274;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 146.80%2C E-value 3.9e-40;gbkey=misc_feature;gene=SCI8.25c
NC_003888.3	RefSeq	sequence_feature	1968022	1968066	.	-	.	ID=id2374;Dbxref=GeneID:1097274;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCI8.25c
NC_003888.3	RefSeq	sequence_feature	1968298	1968321	.	-	.	ID=id2375;Dbxref=GeneID:1097274;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI8.25c
NC_003888.3	RefSeq	sequence_feature	1968700	1969314	.	-	.	ID=id2376;Dbxref=GeneID:1097274;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 164.70%2C E-value 1.5e-45;gbkey=misc_feature;gene=SCI8.25c
NC_003888.3	RefSeq	sequence_feature	1968874	1968918	.	-	.	ID=id2377;Dbxref=GeneID:1097274;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCI8.25c
NC_003888.3	RefSeq	sequence_feature	1969270	1969293	.	-	.	ID=id2378;Dbxref=GeneID:1097274;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI8.25c
NC_003888.3	RefSeq	ribosome_entry_site	1969400	1969404	.	-	.	ID=id2379;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	1969462	1969466	.	+	.	ID=id2380;gbkey=RBS
NC_003888.3	RefSeq	gene	1969468	1970052	.	+	.	ID=gene1841;Dbxref=GeneID:1097275;Name=SCI8.26;gbkey=Gene;gene=SCI8.26;gene_biotype=protein_coding;gene_synonym=SCI8.26;locus_tag=SCO1841
NC_003888.3	RefSeq	CDS	1969468	1970052	.	+	0	ID=cds1806;Parent=gene1841;Dbxref=Genbank:NP_626109.1,GeneID:1097275;Name=NP_626109.1;Note=SCI8.26%2C unknown%2C len: 194 aa. Weakly similar to a protein of unknown function from Mycobacterium tuberculosis: SW:YZ15_MYCTU (EMBL: Z73101) hypothetical 16.1 KD protein precursor (152 aa)%2C fasta scores opt: 220 z-score: 256.4 E(): 6.5e-07 33.6%25 identity in 131 aa overlap.;gbkey=CDS;gene=SCI8.26;product=hypothetical protein;protein_id=NP_626109.1;transl_table=11
NC_003888.3	RefSeq	gene	1970085	1971428	.	-	.	ID=gene1842;Dbxref=GeneID:1097276;Name=SCI8.27c;gbkey=Gene;gene=SCI8.27c;gene_biotype=protein_coding;gene_synonym=SCI8.27c;locus_tag=SCO1842
NC_003888.3	RefSeq	CDS	1970085	1971428	.	-	0	ID=cds1807;Parent=gene1842;Dbxref=Genbank:NP_626110.1,GeneID:1097276;Name=NP_626110.1;Note=SCI8.27c%2C unknown%2C len: 447 aa. Similar to another Streptomyces coelicolor protein of unknown function: TR:CAB46408 (EMBL: AL096743) hypothetical 49.9 KD protein (475 aa)%2C fasta scores opt: 380 z-score: 402.6 E(): 4.8e-15 32.1%25 identity in 492 aa overlap.;gbkey=CDS;gene=SCI8.27c;product=hypothetical protein;protein_id=NP_626110.1;transl_table=11
NC_003888.3	RefSeq	gene	1971753	1972880	.	-	.	ID=gene1843;Dbxref=GeneID:1097277;Name=SCI8.28c;gbkey=Gene;gene=SCI8.28c;gene_biotype=protein_coding;gene_synonym=SCI8.28c;locus_tag=SCO1843
NC_003888.3	RefSeq	CDS	1971753	1972880	.	-	0	ID=cds1808;Parent=gene1843;Dbxref=Genbank:NP_626111.1,GeneID:1097277;Name=NP_626111.1;Note=SCI8.28c%2C possible hypothetical protein%2C len: 411 aa%3B similar to TR:Q9RRL1 (EMBL:AE002077) Deinococcus radiodurans hypothetical protein DR2478%2C 407 aa%3B fasta scores: opt: 516 Z-score: 552.7 E(): 3.8e-23%3B 30.469%25 identity in 384 aa overlap. Contains a Prosite hit to PS00120 Lipases%2C serine active site. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SCI8.28c;product=hypothetical protein;protein_id=NP_626111.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1972167	1972196	.	-	.	ID=id2381;Dbxref=GeneID:1097277;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=SCI8.28c
NC_003888.3	RefSeq	repeat_region	1972637	1972683	.	+	.	ID=id2382;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	1972890	1972894	.	-	.	ID=id2383;gbkey=RBS
NC_003888.3	RefSeq	gene	1972995	1973717	.	-	.	ID=gene1844;Dbxref=GeneID:1097278;Name=SCI8.29c;gbkey=Gene;gene=SCI8.29c;gene_biotype=protein_coding;gene_synonym=SCI8.29c;locus_tag=SCO1844
NC_003888.3	RefSeq	CDS	1972995	1973717	.	-	0	ID=cds1809;Parent=gene1844;Dbxref=Genbank:NP_626112.1,GeneID:1097278;Name=NP_626112.1;Note=SCI8.29c%2C possible aldolase%2C len: 240 aa. Similar to many aldolases e.g. Escherichia coli SW:FUCA_ECOLI (EMBL: M31059) L-fuculose phosphate aldolase (EC 4.1.2.17) (215 aa)%2C fasta scores opt: 485 z-score: 552.3 E(): 2.1e-23 42.3%25 identity in 194 aa overlap. Contains a Pfam match to entry PF00596 Aldolase_II%2C Class II Aldolase and Adducin N-terminal domain.;gbkey=CDS;gene=SCI8.29c;product=aldolase;protein_id=NP_626112.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1973001	1973630	.	-	.	ID=id2384;Dbxref=GeneID:1097278;Note=Pfam match to entry PF00596 Aldolase_II%2C Class II Aldolase and Adducin N-terminal domain.%2C score 97.30%2C E-value 3.1e-25;gbkey=misc_feature;gene=SCI8.29c
NC_003888.3	RefSeq	ribosome_entry_site	1973726	1973731	.	-	.	ID=id2385;gbkey=RBS
NC_003888.3	RefSeq	gene	1973943	1975214	.	+	.	ID=gene1845;Dbxref=GeneID:1097279;Name=SCI8.30;gbkey=Gene;gene=SCI8.30;gene_biotype=protein_coding;gene_synonym=SCI8.30;locus_tag=SCO1845
NC_003888.3	RefSeq	CDS	1973943	1975214	.	+	0	ID=cds1810;Parent=gene1845;Dbxref=Genbank:NP_626113.1,GeneID:1097279;Name=NP_626113.1;Note=SCI8.30%2C possible low-affinity phosphate transport protein%2C len: 423 aa. Highly similar to many possible transporters%2C including: Streptomyces halstedii SW: PITH_STRHA (EMBL: L05390)  low-affinity inorganic phosphate transporter (fragment) (>213 aa)%2C fasta scores opt: 505 z-score: 517.8 E(): 1.8e-21 45.9%25 identity in 194 aa overlap and Mycobacterium tuberculosis TR:O06411 (EMBL: Z95558) hypothetical 42.7 KD protein (417 aa)%2C fasta scores opt: 1286 z-score: 1295.4 E():0 50.8%25 identity in 421 aa overlap. Contains a Pfam match to entry PF01384 PHO4%2C Phosphate transporter family. Also contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCI8.30;product=low-affinity phosphate transport protein;protein_id=NP_626113.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1974006	1974905	.	+	.	ID=id2386;Dbxref=GeneID:1097279;Note=Pfam match to entry PF01384 PHO4%2C Phosphate transporter family%2C score 111.20%2C E-value 2e-29;gbkey=misc_feature;gene=SCI8.30
NC_003888.3	RefSeq	repeat_region	1974476	1974522	.	-	.	ID=id2387;gbkey=repeat_region
NC_003888.3	RefSeq	gene	1975249	1975470	.	+	.	ID=gene1846;Dbxref=GeneID:1097280;Name=SCI8.31;gbkey=Gene;gene=SCI8.31;gene_biotype=protein_coding;gene_synonym=SCI8.31;locus_tag=SCO1846
NC_003888.3	RefSeq	CDS	1975249	1975470	.	+	0	ID=cds1811;Parent=gene1846;Dbxref=Genbank:NP_626114.1,GeneID:1097280;Name=NP_626114.1;Note=SCI8.31%2C possible membrane protein%2C len: 73 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI8.31;product=hypothetical protein;protein_id=NP_626114.1;transl_table=11
NC_003888.3	RefSeq	gene	1975869	1976852	.	+	.	ID=gene1847;Dbxref=GeneID:1097281;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=SCO1847
NC_003888.3	RefSeq	CDS	1975869	1976852	.	+	0	ID=cds1812;Parent=gene1847;Dbxref=Genbank:NP_626115.1,GeneID:1097281;Name=NP_626115.1;Note=CobD%3B CbiD in Salmonella%3B converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group;gbkey=CDS;gene=cobD;product=cobalamin biosynthesis protein;protein_id=NP_626115.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1976835	1976838	.	+	.	ID=id2388;Dbxref=GeneID:1097281;gbkey=RBS;gene=cobD
NC_003888.3	RefSeq	gene	1976849	1978357	.	+	.	ID=gene1848;Dbxref=GeneID:1097282;Name=cobQ;gbkey=Gene;gene=cobQ;gene_biotype=protein_coding;gene_synonym=cobQ;locus_tag=SCO1848
NC_003888.3	RefSeq	CDS	1976849	1978357	.	+	0	ID=cds1813;Parent=gene1848;Dbxref=Genbank:NP_626116.1,GeneID:1097282;Name=NP_626116.1;Note=catalyzes amidations at positions B%2C D%2C E%2C and G on adenosylcobyrinic A%2CC-diamide. NH(2) groups are provided by glutamine%2C and one molecule of ATP is hydrogenolyzed for each amidation;gbkey=CDS;gene=cobQ;product=cobyric acid synthase;protein_id=NP_626116.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1976858	1977556	.	+	.	ID=id2389;Dbxref=GeneID:1097282;Note=Pfam match to entry PF01656 CBIA%2C Cobyrinic acid a%2Cc-diamide synthase%2C score 303.10%2C E-value 3.4e-87;gbkey=misc_feature;gene=cobQ
NC_003888.3	RefSeq	ribosome_entry_site	1978343	1978346	.	+	.	ID=id2390;Dbxref=GeneID:1097282;gbkey=RBS;gene=cobQ
NC_003888.3	RefSeq	gene	1978354	1982007	.	+	.	ID=gene1849;Dbxref=GeneID:1097283;Name=cobN;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=SCO1849
NC_003888.3	RefSeq	CDS	1978354	1982007	.	+	0	ID=cds1814;Parent=gene1849;Dbxref=Genbank:NP_626117.1,GeneID:1097283;Name=NP_626117.1;Note=with CobST catalyzes the formation of cobyrinic acid a%2Cc-diamide from hydrogenobyrinic acid a%2Cc-diamide in an ATP-dependent manner%3B involved in porphyrin and chlorophyll metabolism%3B vitamin B12 metabolism;gbkey=CDS;gene=cobN;product=cobaltochelatase subunit CobN;protein_id=NP_626117.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	1981989	1981993	.	+	.	ID=id2391;Dbxref=GeneID:1097283;gbkey=RBS;gene=cobN
NC_003888.3	RefSeq	gene	1982004	1984022	.	+	.	ID=gene1850;Dbxref=GeneID:1097284;Name=SCI8.35;gbkey=Gene;gene=SCI8.35;gene_biotype=protein_coding;gene_synonym=SCI8.35;locus_tag=SCO1850
NC_003888.3	RefSeq	CDS	1982004	1984022	.	+	0	ID=cds1815;Parent=gene1850;Dbxref=Genbank:NP_626118.1,GeneID:1097284;Name=NP_626118.1;Note=SCI8.35%2C possible chelatase%2C len: 672 aa. Highly similar to many magnesium chelatase family proteins e.g. Mycobacterium tuberculosis SW:YS50_MYCTU (EMBL: Z95207) hypothetical 67.0 KD protein (629 aa)%2C fasta scores opt: 1941 z-score: 1746.0 E(): 0 54.7%25 identity in 675 aa overlap and Rhodobacter capsulatus SW:BCHI_RHOCA (EMBL: Z11165) magnesium-chelatase 38 KD subunit (Mg-protoporphyrin IX chelatase) (350 aa)%2C fasta scores opt: 1114 z-score: 1008.8 E(): 0 52.7%25 identity in 332 aa overlap. Contains a Pfam match to entry PF01078 Mg_chelatase%2C Magnesium chelatase%2C subunit ChlI and a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCI8.35;product=chelatase;protein_id=NP_626118.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1982058	1983014	.	+	.	ID=id2392;Dbxref=GeneID:1097284;Note=Pfam match to entry PF01078 Mg_chelatase%2C Magnesium chelatase%2C subunit ChlI%2C score 460.70%2C E-value 1.2e-134;gbkey=misc_feature;gene=SCI8.35
NC_003888.3	RefSeq	ribosome_entry_site	1984008	1984013	.	+	.	ID=id2393;Dbxref=GeneID:1097284;gbkey=RBS;gene=SCI8.35
NC_003888.3	RefSeq	gene	1984022	1984621	.	+	.	ID=gene1851;Dbxref=GeneID:1097285;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;gene_synonym=cobO;locus_tag=SCO1851
NC_003888.3	RefSeq	CDS	1984022	1984621	.	+	0	ID=cds1816;Parent=gene1851;Dbxref=Genbank:NP_626119.1,GeneID:1097285;Name=NP_626119.1;Note=catalyzes the formation of adenosylcob(III)yrinic acid a%2Cc-diamide from cob(I)yrinic acid a%2Cc-diamide;gbkey=CDS;gene=cobO;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=NP_626119.1;transl_table=11
NC_003888.3	RefSeq	gene	1984618	1986078	.	+	.	ID=gene1852;Dbxref=GeneID:1097286;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;gene_synonym=cobB;locus_tag=SCO1852
NC_003888.3	RefSeq	CDS	1984618	1986078	.	+	0	ID=cds1817;Parent=gene1852;Dbxref=Genbank:NP_626120.1,GeneID:1097286;Name=NP_626120.1;Note=responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid;gbkey=CDS;gene=cobB;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=NP_626120.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1984651	1985352	.	+	.	ID=id2394;Dbxref=GeneID:1097286;Note=Pfam match to entry PF01656 CBIA%2C Cobyrinic acid a%2Cc-diamide synthase%2C score 234.60%2C E-value 1.4e-66;gbkey=misc_feature;gene=cobB
NC_003888.3	RefSeq	sequence_feature	1985074	1985124	.	+	.	ID=id2395;Dbxref=GeneID:1097286;Note=PS00237 G-protein coupled receptors signature;gbkey=misc_feature;gene=cobB
NC_003888.3	RefSeq	gene	1986075	1986806	.	+	.	ID=gene1853;Dbxref=GeneID:1097287;Name=cobI;gbkey=Gene;gene=cobI;gene_biotype=protein_coding;gene_synonym=cobI;locus_tag=SCO1853
NC_003888.3	RefSeq	CDS	1986075	1986806	.	+	0	ID=cds1818;Parent=gene1853;Dbxref=Genbank:NP_626121.1,GeneID:1097287;Name=NP_626121.1;Note=SCI8.38%2C cobI%2C precorrin-2 C20-methyltransferase (EC 2.1.1.130)%2C len: 243 aa. Similar to many including: Pseudomonas denitrificans SW:COBI_PSEDE (EMBL: M59301) precorrin-2 C20-methyltransferase (EC 2.1.1.130) (S-adenosyl-L-methionine-precorrin-2 methyltransferase) (SP2MT) (244 aa)%2C fasta scores opt: 322 z-score: 369.3 E(): 3.3e-13 30.0%25 identity in 240 aa overlap and to the N-terminus of the CobI/J fusion protein from Mycobacterium tuberculosis SW:COBI_MYCTU (EMBL: Z73966) cobalamin biosynthesis protein CobIJ [includes: precorrin-2 C20-methyltransferase (EC 2.1.1.130) (S-adenosyl-L-methionine- precorrin-2 methyltransferase) (SP2MT)%3B precorrin-3 methylase (EC 2.1.1.-)] (508 aa)%2C fasta scores opt: 305 z-score: 345.6 E(): 7e-12 33.1%25 identity in 242 aa overlap. Contains a Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.;gbkey=CDS;gene=cobI;product=precorrin-2 C20-methyltransferase;protein_id=NP_626121.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1986084	1986731	.	+	.	ID=id2396;Dbxref=GeneID:1097287;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score 78.90%2C E-value 1.1e-19;gbkey=misc_feature;gene=cobI
NC_003888.3	RefSeq	gene	1986827	1987555	.	-	.	ID=gene1854;Dbxref=GeneID:1097288;Name=SCI39.01c;gbkey=Gene;gene=SCI39.01c;gene_biotype=protein_coding;gene_synonym=SCI39.01c,SCI8.39;locus_tag=SCO1854
NC_003888.3	RefSeq	CDS	1986827	1987555	.	-	0	ID=cds1819;Parent=gene1854;Dbxref=Genbank:NP_733549.1,GeneID:1097288;Name=NP_733549.1;Note=SCI39.01c%2C possible integral membrane protein (fragment)%2C len: >174 aa. Contains possible hydrophobic membrane spanning regions~SCI8.39%2C possible permease%2C partial CDS%2C len: > 104 aa. Weakly similar to Escherichia coli SW:BTUC_ECOLI (EMBL: M14031) vitamin B12 transport system permease (326 aa)%2C fasta scores opt: 101 z-score: 140.5 E():1.9 32.5%25 identity in 77 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCI39.01c;product=permease;protein_id=NP_733549.1;transl_table=11
NC_003888.3	RefSeq	gene	1987618	1988463	.	+	.	ID=gene1855;Dbxref=GeneID:1097289;Name=SCI39.02;gbkey=Gene;gene=SCI39.02;gene_biotype=protein_coding;gene_synonym=SCI39.02;locus_tag=SCO1855
NC_003888.3	RefSeq	CDS	1987618	1988463	.	+	0	ID=cds1820;Parent=gene1855;Dbxref=Genbank:NP_626122.1,GeneID:1097289;Name=NP_626122.1;Note=SCI39.02%2C probable precorrin-4 C11-methyltransferase%2C len: 281 aa%3B similar to TR:O87696 (EMBL:AJ000758) Bacillus megaterium precorrin-4 methylase CbiF%2C 258 aa%3B fasta scores: opt: 674 Z-score: 771.2 bits: 150.4 E(): 2.3e-35%3B 41.502%25 identity in 253 aa overlap and to SW:COBM_PSEDE (EMBL:M59301) Pseudomonas denitrificans precorrin-4 C11-methyltransferase (EC 2.1.1.133) CobM%2C 253 aa%3B fasta scores: opt: 652 Z-score: 746.5 bits: 145.8 E(): 5.5e-34%3B 43.145%25 identity in 248 aa overlap . Contains Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases;gbkey=CDS;gene=SCI39.02;product=precorrin-4 C11-methyltransferase;protein_id=NP_626122.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1987666	1988292	.	+	.	ID=id2397;Dbxref=GeneID:1097289;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score 180.30%2C E-value 3.1e-50;gbkey=misc_feature;gene=SCI39.02
NC_003888.3	RefSeq	gene	1988469	1989701	.	+	.	ID=gene1856;Dbxref=GeneID:1097290;Name=SCI39.03;gbkey=Gene;gene=SCI39.03;gene_biotype=protein_coding;gene_synonym=SCI39.03;locus_tag=SCO1856
NC_003888.3	RefSeq	CDS	1988469	1989701	.	+	0	ID=cds1821;Parent=gene1856;Dbxref=Genbank:NP_626123.1,GeneID:1097290;Name=NP_626123.1;Note=SCI39.03%2C probable precorrin-6Y C5%2C15-methyltransferase%2C len: 410 aa%3B similar to SW:COBL_PSEDE (EMBL:M59301) Pseudomonas denitrificans precorrin-6Y C5%2C15-methyltransferase [decarboxylating] (EC 2.1.1.132) CobL%2C 413 aa%3B fasta scores: opt: 614 Z-score: 634.0 bits: 126.3 E(): 1e-27%3B 37.500%25 identity in 408 aa overlap. Contains Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases;gbkey=CDS;gene=SCI39.03;product=precorrin-6Y C5%2C15-methyltransferase;protein_id=NP_626123.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1988469	1989014	.	+	.	ID=id2398;Dbxref=GeneID:1097290;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score -5.80%2C E-value 3.3e-05;gbkey=misc_feature;gene=SCI39.03
NC_003888.3	RefSeq	gene	1989779	1991530	.	+	.	ID=gene1857;Dbxref=GeneID:1097291;Name=SCI39.04;gbkey=Gene;gene=SCI39.04;gene_biotype=protein_coding;gene_synonym=SCI39.04;locus_tag=SCO1857
NC_003888.3	RefSeq	CDS	1989779	1991530	.	+	0	ID=cds1822;Parent=gene1857;Dbxref=Genbank:NP_626124.1,GeneID:1097291;Name=NP_626124.1;Note=SCI39.04%2C probable bifunctional protein (CbiGH)%2C len: 583 aa%3B N-terminal region similar to SW:CBIG_SALTY (EMBL:L12006) Salmonella typhimurium involved in cobalamin synthesis CbiG protein%2C 351 aa%3B fasta scores: opt: 312 Z-score: 304.6 bits: 65.6 E(): 2.2e-09%3B 32.986%25 identity in 288 aa overlap and C-terminal region similar to SW:CBIH_SALTY (EMBL:L12006) Salmonella typhimurium precorrin-3B C17-methyltransferase (EC 2.1.1.131) CbiH%2C 241 aa%3B fasta scores: opt: 684 Z-score: 658.7 bits: 130.6 E(): 4.3e-29%3B 46.862%25 identity in 239 aa overlap. Contains Pfam match to entry PF01890 CbiG%2C CbiG and PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases and match to Prosite entry PS00639 Eukaryotic thiol (cysteine) proteases histidine active site;gbkey=CDS;gene=SCI39.04;product=bifunctional CbiGH;protein_id=NP_626124.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1989860	1990615	.	+	.	ID=id2399;Dbxref=GeneID:1097291;Note=Pfam match to entry PF01890 CbiG%2C CbiG%2C score 168.90%2C E-value 8.2e-47;gbkey=misc_feature;gene=SCI39.04
NC_003888.3	RefSeq	sequence_feature	1990646	1991266	.	+	.	ID=id2400;Dbxref=GeneID:1097291;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score 113.80%2C E-value 3.3e-30;gbkey=misc_feature;gene=SCI39.04
NC_003888.3	RefSeq	sequence_feature	1990853	1990885	.	+	.	ID=id2401;Dbxref=GeneID:1097291;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site;gbkey=misc_feature;gene=SCI39.04
NC_003888.3	RefSeq	ribosome_entry_site	1991517	1991521	.	+	.	ID=id2402;Dbxref=GeneID:1097291;gbkey=RBS;gene=SCI39.04
NC_003888.3	RefSeq	gene	1991527	1992444	.	+	.	ID=gene1858;Dbxref=GeneID:1097292;Name=SCI39.05;gbkey=Gene;gene=SCI39.05;gene_biotype=protein_coding;gene_synonym=SCI39.05;locus_tag=SCO1858
NC_003888.3	RefSeq	CDS	1991527	1992444	.	+	0	ID=cds1823;Parent=gene1858;Dbxref=Genbank:NP_626125.1,GeneID:1097292;Name=NP_626125.1;Note=SCI39.05%2C conserved hypothetical protein%2C len: 305 aa%3B similar to TR:O87690 (EMBL:AJ000758) Bacillus megaterium Cbi protein CbiX%2C 306 aa%3B fasta scores: opt: 791 Z-score: 870.2 bits: 169.1 E(): 7e-41%3B 39.000%25 identity in 300 aa overlap. Contains Pfam match to entry PF01903 CbiX%2C CbiX;gbkey=CDS;gene=SCI39.05;product=hypothetical protein;protein_id=NP_626125.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1991554	1991892	.	+	.	ID=id2403;Dbxref=GeneID:1097292;Note=Pfam match to entry PF01903 CbiX%2C CbiX%2C score -17.50%2C E-value 0.0059;gbkey=misc_feature;gene=SCI39.05
NC_003888.3	RefSeq	gene	1992485	1993504	.	+	.	ID=gene1859;Dbxref=GeneID:1097293;Name=SCI39.06;gbkey=Gene;gene=SCI39.06;gene_biotype=protein_coding;gene_synonym=SCI39.06;locus_tag=SCO1859
NC_003888.3	RefSeq	CDS	1992485	1993504	.	+	0	ID=cds1824;Parent=gene1859;Dbxref=Genbank:NP_626126.1,GeneID:1097293;Name=NP_626126.1;Note=SCI39.06%2C probable aminotransferase%2C len: 339 aa%3B similar to SW:HIS8_ECOLI (EMBL:X03416) Escherichia coli histidinol-phosphate aminotransferase (EC 2.6.1.9) HisC%2C 356 aa%3B fasta scores: opt: 351 Z-score: 375.7 bits: 78.0 E(): 2.4e-13%3B 29.450%25 identity in 309 aa overlap. Contains Pfam match to entry PF00222 aminotran_2%2C Aminotransferase class-II and match to Prosite entry PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site;gbkey=CDS;gene=SCI39.06;product=hypothetical protein;protein_id=NP_626126.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1992641	1993423	.	+	.	ID=id2404;Dbxref=GeneID:1097293;Note=Pfam match to entry PF00222 aminotran_2%2C Aminotransferase class-II%2C score 24.40%2C E-value 1.8e-08;gbkey=misc_feature;gene=SCI39.06
NC_003888.3	RefSeq	sequence_feature	1993040	1993081	.	+	.	ID=id2405;Dbxref=GeneID:1097293;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SCI39.06
NC_003888.3	RefSeq	stem_loop	1993483	1993553	.	+	.	ID=id2406;Note=possible stem-loop. Score 54: 22/25 (88%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	1994050	1995057	.	-	.	ID=gene1860;Dbxref=GeneID:1097294;Name=SCI39.07c;gbkey=Gene;gene=SCI39.07c;gene_biotype=protein_coding;gene_synonym=SCI39.07c;locus_tag=SCO1860
NC_003888.3	RefSeq	CDS	1994050	1995057	.	-	0	ID=cds1825;Parent=gene1860;Dbxref=Genbank:NP_626127.1,GeneID:1097294;Name=NP_626127.1;Note=SCI39.07c%2C hypothetical protein%2C len: 335 aa. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and possible N-terminal region signal peptide sequence and a possible hydrophobic membrane spanning region at the C-terminal domain;gbkey=CDS;gene=SCI39.07c;product=hypothetical protein;protein_id=NP_626127.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1994659	1994682	.	-	.	ID=id2407;Dbxref=GeneID:1097294;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI39.07c
NC_003888.3	RefSeq	gene	1995204	1996295	.	-	.	ID=gene1861;Dbxref=GeneID:1097295;Name=SCI39.08c;gbkey=Gene;gene=SCI39.08c;gene_biotype=protein_coding;gene_synonym=SCI39.08c;locus_tag=SCO1861
NC_003888.3	RefSeq	CDS	1995204	1996295	.	-	0	ID=cds1826;Parent=gene1861;Dbxref=Genbank:NP_626128.1,GeneID:1097295;Name=NP_626128.1;Note=SCI39.08c%2C conserved hypothetical protein%2C len: 363 aa%3B similar to SW:YT15_MYCTU (EMBL:Z74697) Mycobacterium tuberculosis hypothetical 39.8 kDa protein RV2915c%2C 370 aa%3B fasta scores: opt: 1341 Z-score: 1487.0 bits: 283.8 E(): 3.1e-75%3B 56.630%25 identity in 362 aa overlap;gbkey=CDS;gene=SCI39.08c;product=hypothetical protein;protein_id=NP_626128.1;transl_table=11
NC_003888.3	RefSeq	gene	1996351	1996833	.	-	.	ID=gene1862;Dbxref=GeneID:1097296;Name=SCI39.09c;gbkey=Gene;gene=SCI39.09c;gene_biotype=protein_coding;gene_synonym=SCI39.09c;locus_tag=SCO1862
NC_003888.3	RefSeq	CDS	1996351	1996833	.	-	0	ID=cds1827;Parent=gene1862;Dbxref=Genbank:NP_626129.1,GeneID:1097296;Name=NP_626129.1;Note=SCI39.09c%2C possible integral membrane protein%2C len: 160 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCI39.09c;product=hypothetical protein;protein_id=NP_626129.1;transl_table=11
NC_003888.3	RefSeq	gene	1996945	1998165	.	-	.	ID=gene1863;Dbxref=GeneID:1097297;Name=SCI39.10c;gbkey=Gene;gene=SCI39.10c;gene_biotype=protein_coding;gene_synonym=SCI39.10c;locus_tag=SCO1863
NC_003888.3	RefSeq	CDS	1996945	1998165	.	-	0	ID=cds1828;Parent=gene1863;Dbxref=Genbank:NP_626130.1,GeneID:1097297;Name=NP_626130.1;Note=SCI39.10c%2C unknown%2C len: 406 aa. High content in arginine amino acid residues and also highly hydrophilic;gbkey=CDS;gene=SCI39.10c;product=hypothetical protein;protein_id=NP_626130.1;transl_table=11
NC_003888.3	RefSeq	gene	1998468	1998980	.	+	.	ID=gene1864;Dbxref=GeneID:1097298;Name=SCI39.11;gbkey=Gene;gene=SCI39.11;gene_biotype=protein_coding;gene_synonym=SCI39.11;locus_tag=SCO1864
NC_003888.3	RefSeq	CDS	1998468	1998980	.	+	0	ID=cds1829;Parent=gene1864;Dbxref=Genbank:NP_626131.1,GeneID:1097298;Name=NP_626131.1;Note=SCI39.11%2C probable acetyltransferase%2C len: 170 aa%3B similar to SW:ECTA_MARHA (EMBL:U66614) Marinococcus halophilus L-2%2C4-diaminobutyric acid acetyltransferase (EC 2.3.1.*) EctA%2C 172 aa%3B fasta scores: opt: 443 Z-score: 540.9 bits: 106.5 E(): 1.5e-22%3B 42.675%25 identity in 157 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCI39.11;product=acetyltransferase;protein_id=NP_626131.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1998621	1998869	.	+	.	ID=id2408;Dbxref=GeneID:1097298;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 57.60%2C E-value 2.6e-13;gbkey=misc_feature;gene=SCI39.11
NC_003888.3	RefSeq	ribosome_entry_site	1999096	1999100	.	+	.	ID=id2409;gbkey=RBS
NC_003888.3	RefSeq	gene	1999110	2000381	.	+	.	ID=gene1865;Dbxref=GeneID:1097299;Name=SCI39.12;gbkey=Gene;gene=SCI39.12;gene_biotype=protein_coding;gene_synonym=SCI39.12;locus_tag=SCO1865
NC_003888.3	RefSeq	CDS	1999110	2000381	.	+	0	ID=cds1830;Parent=gene1865;Dbxref=Genbank:NP_626132.1,GeneID:1097299;Name=NP_626132.1;Note=catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde;gbkey=CDS;gene=SCI39.12;product=diaminobutyrate--2-oxoglutarate aminotransferase;protein_id=NP_626132.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	1999209	2000027	.	+	.	ID=id2410;Dbxref=GeneID:1097299;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferase class-III pyridoxal-phosphate%2C score 235.70%2C E-value 2e-81;gbkey=misc_feature;gene=SCI39.12
NC_003888.3	RefSeq	sequence_feature	1999911	1999940	.	+	.	ID=id2411;Dbxref=GeneID:1097299;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SCI39.12
NC_003888.3	RefSeq	sequence_feature	2000160	2000312	.	+	.	ID=id2412;Dbxref=GeneID:1097299;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferase class-III pyridoxal-phosphate%2C score 28.60%2C E-value 2.2e-09;gbkey=misc_feature;gene=SCI39.12
NC_003888.3	RefSeq	ribosome_entry_site	2000482	2000487	.	+	.	ID=id2413;gbkey=RBS
NC_003888.3	RefSeq	gene	2000500	2000898	.	+	.	ID=gene1866;Dbxref=GeneID:1097300;Name=ectC;gbkey=Gene;gene=ectC;gene_biotype=protein_coding;gene_synonym=SCI39.13;locus_tag=SCO1866
NC_003888.3	RefSeq	CDS	2000500	2000898	.	+	0	ID=cds1831;Parent=gene1866;Dbxref=Genbank:NP_626133.1,GeneID:1097300;Name=NP_626133.1;Note=N-acetyldiaminobutyrate dehydratase%3B catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha%2Cgamma-diaminobutyric acid;gbkey=CDS;gene=ectC;product=L-ectoine synthase;protein_id=NP_626133.1;transl_table=11
NC_003888.3	RefSeq	gene	2000962	2001804	.	+	.	ID=gene1867;Dbxref=GeneID:1097301;Name=SCI39.14;gbkey=Gene;gene=SCI39.14;gene_biotype=protein_coding;gene_synonym=SCI39.14;locus_tag=SCO1867
NC_003888.3	RefSeq	CDS	2000962	2001804	.	+	0	ID=cds1832;Parent=gene1867;Dbxref=Genbank:NP_626134.1,GeneID:1097301;Name=NP_626134.1;Note=SCI39.14%2C possible hydroxylase%2C len: 280 aa%3B similar to TR:O06499 (EMBL:D78338) Dactylosporangium L-proline 4-hydroxylase%2C 272 aa%3B fasta scores: opt: 458 Z-score: 529.1 bits: 105.7 E(): 7.1e-22%3B 34.351%25 identity in 262 aa overlap;gbkey=CDS;gene=SCI39.14;product=hydroxylase;protein_id=NP_626134.1;transl_table=11
NC_003888.3	RefSeq	gene	2001886	2002980	.	-	.	ID=gene1868;Dbxref=GeneID:1097302;Name=SCI39.15c;gbkey=Gene;gene=SCI39.15c;gene_biotype=protein_coding;gene_synonym=SCI39.15c;locus_tag=SCO1868
NC_003888.3	RefSeq	CDS	2001886	2002980	.	-	0	ID=cds1833;Parent=gene1868;Dbxref=Genbank:NP_626135.1,GeneID:1097302;Name=NP_626135.1;Note=SCI39.15c%2C conserved hypothetical protein%2C len: 364 aa%3B similar to SW:YCBU_BACSU (EMBL:AB000617) Bacillus subtilis hypothetical protein homologue of class-V proteins of pyridoxal-phosphate-dependent aminotransferase YcbU%2C aa%3B fasta scores: opt: 277 Z-score: 303.9 bits: 64.9 E(): 2.5e-09%3B 27.707%25 identity in 314 aa overlap;gbkey=CDS;gene=SCI39.15c;product=hypothetical protein;protein_id=NP_626135.1;transl_table=11
NC_003888.3	RefSeq	gene	2003040	2003753	.	-	.	ID=gene1869;Dbxref=GeneID:1097303;Name=SCI39.16c;gbkey=Gene;gene=SCI39.16c;gene_biotype=protein_coding;gene_synonym=SCI39.16c;locus_tag=SCO1869
NC_003888.3	RefSeq	CDS	2003040	2003753	.	-	0	ID=cds1834;Parent=gene1869;Dbxref=Genbank:NP_626136.1,GeneID:1097303;Name=NP_626136.1;Note=SCI39.16c%2C conserved hypothetical protein%2C len: 237 aa%3B similar to TR:O68911 (EMBL:AF058302) Streptomyces roseofulvus FrnE protein%2C 216 aa%3B fasta scores: opt: 528 Z-score: 605.5 bits: 119.3 E(): 3.9e-26%3B 46.919%25 identity in 211 aa overlap and to TR:Q9ZA40 (EMBL:AJ011500) Streptomyces violaceoruber disulphide bond-forming protein Gra-ORF19%2C 220 aa%3B fasta scores: opt: 316 Z-score: 366.6 bits: 75.1 E(): 7.9e-13%3B 37.104%25 identity in 221 aa overlap;gbkey=CDS;gene=SCI39.16c;product=hypothetical protein;protein_id=NP_626136.1;transl_table=11
NC_003888.3	RefSeq	gene	2003846	2004454	.	-	.	ID=gene1870;Dbxref=GeneID:1097304;Name=SCI39.17c;gbkey=Gene;gene=SCI39.17c;gene_biotype=protein_coding;gene_synonym=SCI39.17c;locus_tag=SCO1870
NC_003888.3	RefSeq	CDS	2003846	2004454	.	-	0	ID=cds1835;Parent=gene1870;Dbxref=Genbank:NP_626137.1,GeneID:1097304;Name=NP_626137.1;Note=SCI39.17c%2C unknown%2C len: 202 aa;gbkey=CDS;gene=SCI39.17c;product=hypothetical protein;protein_id=NP_626137.1;transl_table=11
NC_003888.3	RefSeq	gene	2004598	2006127	.	-	.	ID=gene1871;Dbxref=GeneID:1097305;Name=SCI39.18c;gbkey=Gene;gene=SCI39.18c;gene_biotype=protein_coding;gene_synonym=SCI39.18c;locus_tag=SCO1871
NC_003888.3	RefSeq	CDS	2004598	2006127	.	-	0	ID=cds1836;Parent=gene1871;Dbxref=Genbank:NP_626138.1,GeneID:1097305;Name=NP_626138.1;Note=SCI39.18c%2C probable aldehyde dehydrogenase%2C len: 509 aa%3B similar to TR:Q56694 (EMBL:U39638) Vibrio harveyi fatty aldehyde dehydrogenase AldH%2C 510 aa%3B fasta scores: opt: 1209 Z-score: 1264.1 bits: 243.5 E(): 8e-63%3B 42.300%25 identity in 487 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family;gbkey=CDS;gene=SCI39.18c;product=aldehyde dehydrogenase;protein_id=NP_626138.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2004685	2006127	.	-	.	ID=id2414;Dbxref=GeneID:1097305;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score -107.40%2C E-value 8.3e-10;gbkey=misc_feature;gene=SCI39.18c
NC_003888.3	RefSeq	ribosome_entry_site	2006136	2006140	.	-	.	ID=id2415;gbkey=RBS
NC_003888.3	RefSeq	gene	2006250	2007023	.	+	.	ID=gene1872;Dbxref=GeneID:1097306;Name=SCI39.19;gbkey=Gene;gene=SCI39.19;gene_biotype=protein_coding;gene_synonym=SCI39.19;locus_tag=SCO1872
NC_003888.3	RefSeq	CDS	2006250	2007023	.	+	0	ID=cds1837;Parent=gene1872;Dbxref=Genbank:NP_626139.1,GeneID:1097306;Name=NP_626139.1;Note=SCI39.19%2C probable IclR-family transcriptional regulator%2C len: 257 aa%3B similar to SW:ICLR_ECOLI (EMBL:M31761) Escherichia coli acetate operon repressor IclR%2C 274 aa%3B fasta scores: opt: 413 Z-score: 491.6 bits: 98.6 E(): 8.7e-20%3B31.855%25 identity in 248 aa overlap and to TR:Q9RDE7 (EMBL:AL136503) Streptomyces coelicolor IclR-family transcriptional regulator SCC77.11%2C 265aa%3B fasta scores: opt: 766 Z-score: 904.5 bits: 175.0 E(): 8.6e-43%3B 52.846%25 identity in 246 aa overlap. Contains Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator and possible helix-turn-helix motif at residues 32..53 (+3.00 SD);gbkey=CDS;gene=SCI39.19;product=IclR family transcriptional regulator;protein_id=NP_626139.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2006457	2007008	.	+	.	ID=id2416;Dbxref=GeneID:1097306;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 161.50%2C E-value 1.4e-44;gbkey=misc_feature;gene=SCI39.19
NC_003888.3	RefSeq	gene	2007027	2007497	.	+	.	ID=gene1873;Dbxref=GeneID:1097307;Name=SCI39.20;gbkey=Gene;gene=SCI39.20;gene_biotype=protein_coding;gene_synonym=SCI39.20;locus_tag=SCO1873
NC_003888.3	RefSeq	CDS	2007027	2007497	.	+	0	ID=cds1838;Parent=gene1873;Dbxref=Genbank:NP_626140.1,GeneID:1097307;Name=NP_626140.1;Note=SCI39.20%2C probable acetyltransferase%2C len: 156 aa%3B similar to TR:Q9SKZ7 (EMBL:AC006223) Arabidopsis thaliana alanine acetyl transferase AT2G32020%2C 183 aa%3B fasta scores: opt: 205 Z-score: 253.5 bits: 53.3 E(): 1.6e-06%3B 31.210%25 identity in 157 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCI39.20;product=acetyltransferase;protein_id=NP_626140.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2007195	2007419	.	+	.	ID=id2417;Dbxref=GeneID:1097307;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 48.30%2C E-value 1.7e-10;gbkey=misc_feature;gene=SCI39.20
NC_003888.3	RefSeq	gene	2007606	2007818	.	+	.	ID=gene1874;Dbxref=GeneID:1097308;Name=SCI39.21;gbkey=Gene;gene=SCI39.21;gene_biotype=protein_coding;gene_synonym=SCI39.21;locus_tag=SCO1874
NC_003888.3	RefSeq	CDS	2007606	2007818	.	+	0	ID=cds1839;Parent=gene1874;Dbxref=Genbank:NP_626141.1,GeneID:1097308;Name=NP_626141.1;Note=SCI39.21%2C hypothetical protein%2C len: 70 aa%3B similar to C-terminal region of many two-component system response regulators%2C e.g. TR:Q9K3I0 (EMBL:AL390188) Streptomyces coelicolor two-component system response regulator 2SCG18.07%2C 220 aa%3B fasta scores: opt: 154 Z-score: 195.9 bits: 41.7 E(): 0.0025%3B 54.717%25 identity in 53 aa overlap;gbkey=CDS;gene=SCI39.21;product=hypothetical protein;protein_id=NP_626141.1;transl_table=11
NC_003888.3	RefSeq	gene	2007938	2009392	.	+	.	ID=gene1875;Dbxref=GeneID:1097309;Name=SCI39.22;gbkey=Gene;gene=SCI39.22;gene_biotype=protein_coding;gene_synonym=SCI39.22;locus_tag=SCO1875
NC_003888.3	RefSeq	CDS	2007938	2009392	.	+	0	ID=cds1840;Parent=gene1875;Dbxref=Genbank:NP_626142.1,GeneID:1097309;Name=NP_626142.1;Note=SCI39.22%2C possible  penicillin-binding protein%2C len: 484 aa%3B similar to TR:Q9L656 (EMBL:AF241575) Streptomyces griseus PbpA%2C 485 aa%3B fasta scores: opt: 1581 Z-score: 1674.1 bits: 319.2 E(): 1.2e-85%3B 51.633%25 identity in 490 aa overlap and to TR:Q9XA17 (EMBL:AL079308) Streptomyces coelicolor penicillin binding protein SCH69.17%2C 490 aa%3B fasta scores: opt: 1649 Z-score: 1745.9 bits: 332.5 E(): 1.2e-89%3B 52.965%25 identity in 489 aa overlap. Contains Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI39.22;product=penicillin binding protein;protein_id=NP_626142.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2008352	2009365	.	+	.	ID=id2418;Dbxref=GeneID:1097309;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 266.40%2C E-value 3.9e-76;gbkey=misc_feature;gene=SCI39.22
NC_003888.3	RefSeq	sequence_feature	2009168	2009191	.	+	.	ID=id2419;Dbxref=GeneID:1097309;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCI39.22
NC_003888.3	RefSeq	ribosome_entry_site	2009456	2009460	.	+	.	ID=id2420;gbkey=RBS
NC_003888.3	RefSeq	gene	2009469	2010041	.	+	.	ID=gene1876;Dbxref=GeneID:1097310;Name=SCI39.23;gbkey=Gene;gene=SCI39.23;gene_biotype=protein_coding;gene_synonym=SCI39.23;locus_tag=SCO1876
NC_003888.3	RefSeq	CDS	2009469	2010041	.	+	0	ID=cds1841;Parent=gene1876;Dbxref=Genbank:NP_626143.1,GeneID:1097310;Name=NP_626143.1;Note=SCI39.23%2C possible RNA polymerase sigma factor%2C len: 190 aa%3B similar to SW:RPOE_STRCO (EMBL:L29636) Streptomyces coelicolor RNA polymerase sigma-E factor SigE%2C 176 aa%3B fasta scores: opt: 210 Z-score: 262.1 bits: 55.1 E(): 5.2e-07%3B 34.177%25 identity in 158 aa overlap. Contains possible helix-turn-helix motif at residues 132..153 (+3.59 SD);gbkey=CDS;gene=SCI39.23;product=RNA polymerase sigma factor;protein_id=NP_626143.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2010027	2010031	.	+	.	ID=id2421;Dbxref=GeneID:1097310;gbkey=RBS;gene=SCI39.23
NC_003888.3	RefSeq	gene	2010038	2010712	.	+	.	ID=gene1877;Dbxref=GeneID:1097311;Name=SCI39.24;gbkey=Gene;gene=SCI39.24;gene_biotype=protein_coding;gene_synonym=SCI39.24;locus_tag=SCO1877
NC_003888.3	RefSeq	CDS	2010038	2010712	.	+	0	ID=cds1842;Parent=gene1877;Dbxref=Genbank:NP_626144.1,GeneID:1097311;Name=NP_626144.1;Note=SCI39.24%2C unknown%2C len: 224 aa;gbkey=CDS;gene=SCI39.24;product=hypothetical protein;protein_id=NP_626144.1;transl_table=11
NC_003888.3	RefSeq	gene	2010725	2011522	.	-	.	ID=gene1878;Dbxref=GeneID:1097312;Name=SCI39.25c;gbkey=Gene;gene=SCI39.25c;gene_biotype=protein_coding;gene_synonym=SCI39.25c;locus_tag=SCO1878
NC_003888.3	RefSeq	CDS	2010725	2011522	.	-	0	ID=cds1843;Parent=gene1878;Dbxref=Genbank:NP_626145.1,GeneID:1097312;Name=NP_626145.1;Note=SCI39.25c%2C possible hypothetical protein%2C len: 265 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI39.25c;product=hypothetical protein;protein_id=NP_626145.1;transl_table=11
NC_003888.3	RefSeq	gene	2011647	2012792	.	-	.	ID=gene1879;Dbxref=GeneID:1097313;Name=SCI39.26c;gbkey=Gene;gene=SCI39.26c;gene_biotype=protein_coding;gene_synonym=SCI39.26c;locus_tag=SCO1879
NC_003888.3	RefSeq	CDS	2011647	2012792	.	-	0	ID=cds1844;Parent=gene1879;Dbxref=Genbank:NP_626146.1,GeneID:1097313;Name=NP_626146.1;Note=SCI39.26c%2C probable  pectinesterase%2C len: 381 aa%3B similar to SW:PME_BURSO (EMBL:M62803) Burkholderia solanacearum pectinesterase precursor (EC 3.1.1.11) Pme%2C 396 aa%3B fasta scores: opt: 350 Z-score: 372.6 bits: 77.7 E(): 3.7e-13%3B 32.036%25 identity in 334 aa overlap. Contains Pfam match to entry PF01095 Pectinesterase%2C Pectinesterase and match to Prosite entry PS00503 Pectinesterase signature 2. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI39.26c;product=pectinesterase;protein_id=NP_626146.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2011689	2012792	.	-	.	ID=id2422;Dbxref=GeneID:1097313;Note=Pfam match to entry PF01095 Pectinesterase%2C Pectinesterase%2C score 125.30%2C E-value 1.1e-33;gbkey=misc_feature;gene=SCI39.26c
NC_003888.3	RefSeq	sequence_feature	2012115	2012144	.	-	.	ID=id2423;Dbxref=GeneID:1097313;Note=PS00503 Pectinesterase signature 2;gbkey=misc_feature;gene=SCI39.26c
NC_003888.3	RefSeq	ribosome_entry_site	2012800	2012805	.	-	.	ID=id2424;gbkey=RBS
NC_003888.3	RefSeq	gene	2012859	2014193	.	-	.	ID=gene1880;Dbxref=GeneID:1097314;Name=SCI39.27c;gbkey=Gene;gene=SCI39.27c;gene_biotype=protein_coding;gene_synonym=SCI39.27c;locus_tag=SCO1880
NC_003888.3	RefSeq	CDS	2012859	2014193	.	-	0	ID=cds1845;Parent=gene1880;Dbxref=Genbank:NP_626147.1,GeneID:1097314;Name=NP_626147.1;Note=SCI39.27c%2C probable  pectate lyase%2C len: 444 aa%3B similar to SW:PEL_BACS (EMBL:X74880) Bacillus subtilis pectate lyase precursor (EC 4.2.2.2) Pel%2C 420 aa%3B fasta scores: opt: 1127 Z-score: 1249.8 bits: 240.3 E(): 5e-62%3B 42.431%25 identity in 436 aa overlap. Contains 2x Pfam matches to entry PF00544 pec_lyase%2C Pectate lyase. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI39.27c;product=pectate lyase;protein_id=NP_626147.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2013093	2013707	.	-	.	ID=id2425;Dbxref=GeneID:1097314;Note=Pfam match to entry PF00544 pec_lyase%2C Pectate lyase%2C score 227.40%2C E-value 2.1e-64;gbkey=misc_feature;gene=SCI39.27c
NC_003888.3	RefSeq	sequence_feature	2013879	2014154	.	-	.	ID=id2426;Dbxref=GeneID:1097314;Note=Pfam match to entry PF00544 pec_lyase%2C Pectate lyase%2C score 42.70%2C E-value 1.3e-10;gbkey=misc_feature;gene=SCI39.27c
NC_003888.3	RefSeq	ribosome_entry_site	2014203	2014206	.	-	.	ID=id2427;gbkey=RBS
NC_003888.3	RefSeq	gene	2014258	2015061	.	-	.	ID=gene1881;Dbxref=GeneID:1097315;Name=SCI39.28c;gbkey=Gene;gene=SCI39.28c;gene_biotype=protein_coding;gene_synonym=SCI39.28c;locus_tag=SCO1881
NC_003888.3	RefSeq	CDS	2014258	2015061	.	-	0	ID=cds1846;Parent=gene1881;Dbxref=Genbank:NP_626148.1,GeneID:1097315;Name=NP_626148.1;Note=SCI39.28c%2C hypothetical protein%2C len: 267 aa%3B similar to TR:O31528 (EMBL:Z99107) Bacillus subtilis YesY protein%2C 217 aa%3B fasta scores: opt: 548 Z-score: 648.8 bits: 127.5 E(): 1.5e-28%3B 43.939%25 identity in 198 aa overlap and to TR:Q9L936 (EMBL:AF184175) Bacillus sp. KCCM10143 cephalosporin C deacetylase 217 aa%3B fasta scores: opt: 544 Z-score: 644.2 bits: 126.6 E(): 2.7e-28%3B 44.500%25 identity in 200 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI39.28c;product=hypothetical protein;protein_id=NP_626148.1;transl_table=11
NC_003888.3	RefSeq	gene	2015194	2016552	.	-	.	ID=gene1882;Dbxref=GeneID:1097316;Name=SCI39.29c;gbkey=Gene;gene=SCI39.29c;gene_biotype=protein_coding;gene_synonym=SCI39.29c;locus_tag=SCO1882
NC_003888.3	RefSeq	CDS	2015194	2016552	.	-	0	ID=cds1847;Parent=gene1882;Dbxref=Genbank:NP_626149.1,GeneID:1097316;Name=NP_626149.1;Note=SCI39.29c%2C probable  sugar-binding protein%2C len: 452 aa%3B similar to TR:P72397 (EMBL:Y07706) Streptomyces coelicolor  maltose-binding protein MalE%2C 423 aa%3B fasta scores: opt: 433 Z-score: 459.6 bits: 94.2 E(): 5.2e-18%3B 30.716%25 identity in 433 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI39.29c;product=sugar-binding protein;protein_id=NP_626149.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2015227	2016087	.	-	.	ID=id2428;Dbxref=GeneID:1097316;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 127.70%2C E-value 7.6e-35;gbkey=misc_feature;gene=SCI39.29c
NC_003888.3	RefSeq	ribosome_entry_site	2016559	2016562	.	-	.	ID=id2429;gbkey=RBS
NC_003888.3	RefSeq	gene	2016628	2018172	.	-	.	ID=gene1883;Dbxref=GeneID:1097317;Name=SCI39.30c;gbkey=Gene;gene=SCI39.30c;gene_biotype=protein_coding;gene_synonym=SCI39.30c,SCI7.01c;locus_tag=SCO1883
NC_003888.3	RefSeq	CDS	2016628	2018172	.	-	0	ID=cds1848;Parent=gene1883;Dbxref=Genbank:NP_733550.1,GeneID:1097317;Name=NP_733550.1;Note=SCI7.01c%2C partial CDS%2C possible xylanase%2C len: >95aa%3B similar to the N-terminal region of many eg. TR:O30426 (EMBL:AF005383) xylanase from the thermophile Caldocellum saccharolyticum (1347 aa) fasta scores%3B opt: 263%2C z-score: 357.5%2C E(): 1.4e-12%2C (35.2%25 identity in 91 aa overlap).~SCI39.30c%2C probable xylanase (fragment)%2C len: >458 aa%3B similar to TR:Q9WXE8 (EMBL:AB022865) Prevotella ruminicola xylosidase%2C 452 aa%3B fasta scores: opt: 553 Z-score: 572.6 bits: 115.2 E(): 2.6e-24%3B 37.954%25 identity in 303 aa overlap;gbkey=CDS;gene=SCI39.30c;product=xylanase;protein_id=NP_733550.1;transl_table=11
NC_003888.3	RefSeq	gene	2018169	2019014	.	-	.	ID=gene1884;Dbxref=GeneID:1097318;Name=SCI7.02c;gbkey=Gene;gene=SCI7.02c;gene_biotype=protein_coding;gene_synonym=SCI7.02c;locus_tag=SCO1884
NC_003888.3	RefSeq	CDS	2018169	2019014	.	-	0	ID=cds1849;Parent=gene1884;Dbxref=Genbank:NP_626150.1,GeneID:1097318;Name=NP_626150.1;Note=SCI7.02c%2C unknown%2C len: 281aa;gbkey=CDS;gene=SCI7.02c;product=hypothetical protein;protein_id=NP_626150.1;transl_table=11
NC_003888.3	RefSeq	gene	2019011	2020168	.	-	.	ID=gene1885;Dbxref=GeneID:1097319;Name=SCI7.03c;gbkey=Gene;gene=SCI7.03c;gene_biotype=protein_coding;gene_synonym=SCI7.03c;locus_tag=SCO1885
NC_003888.3	RefSeq	CDS	2019011	2020168	.	-	0	ID=cds1850;Parent=gene1885;Dbxref=Genbank:NP_626151.1,GeneID:1097319;Name=NP_626151.1;Note=SCI7.03c%2C possible oxidoreductase%2C len: 385 aa%3B similar to many proteins of undefined function eg. TR:Q45376 (EMBL:X90711) from a locus required for lipopolysaccharide biosynthesis in Bordetella pertussis (350 aa) fasta scores%3B opt: 232%2C z-score: 266.7%2C E(): 1.6e-07%2C (28.0%25 identity in 275 aa overlap). Contains Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=SCI7.03c;product=oxidoreductase;protein_id=NP_626151.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2019398	2020159	.	-	.	ID=id2430;Dbxref=GeneID:1097319;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 71.60%2C E-value 1.7e-17.;gbkey=misc_feature;gene=SCI7.03c
NC_003888.3	RefSeq	gene	2020165	2021061	.	-	.	ID=gene1886;Dbxref=GeneID:1097320;Name=SCI7.04c;gbkey=Gene;gene=SCI7.04c;gene_biotype=protein_coding;gene_synonym=SCI7.04c;locus_tag=SCO1886
NC_003888.3	RefSeq	CDS	2020165	2021061	.	-	0	ID=cds1851;Parent=gene1886;Dbxref=Genbank:NP_626152.1,GeneID:1097320;Name=NP_626152.1;Note=SCI7.04c%2C possible integral membrane transport protein%2C len: 298aa%3B similar to many eg. SW:YURM_BACSU hypothetical ABC transporter from Bacillus subtilis (300 aa) fasta scores%3B opt: 582%2C z-score: 650.2%2C E(): 6.9e-29%2C (31.7%25 identity in 293 aa overlap) and TR:O87858 (EMBL:AL031013) transmembrane sugar transport protein from Streptomyces coelicolor (279 aa) fasta scores%3B opt: 540%2C z-score: 604.3%2C E(): 2.5e-26%2C (34.7%25 identity in 277 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI7.04c;product=integral membrane transport protein;protein_id=NP_626152.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2020294	2020518	.	-	.	ID=id2431;Dbxref=GeneID:1097320;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 72.20%2C E-value 1.1e-17.;gbkey=misc_feature;gene=SCI7.04c
NC_003888.3	RefSeq	sequence_feature	2020429	2020515	.	-	.	ID=id2432;Dbxref=GeneID:1097320;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCI7.04c
NC_003888.3	RefSeq	gene	2021058	2021993	.	-	.	ID=gene1887;Dbxref=GeneID:1097321;Name=SCI7.05c;gbkey=Gene;gene=SCI7.05c;gene_biotype=protein_coding;gene_synonym=SCI7.05c;locus_tag=SCO1887
NC_003888.3	RefSeq	CDS	2021058	2021993	.	-	0	ID=cds1852;Parent=gene1887;Dbxref=Genbank:NP_626153.1,GeneID:1097321;Name=NP_626153.1;Note=SCI7.05c%2C possible integral membrane transport protein%2C len: 298aa%3B similar to many eg. TR:O51924 (EMBL:AF012836) inner membrane protein%2C MalF from the trehalose/maltose transport system of the hyperthermophilic archaeon Thermococcus litoralis (300 aa) fasta scores%3B opt: 681%2C z-score: 814.3%2C E(): 0%2C (37.5%25 identity in 285 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI7.05c;product=integral membrane transport protein;protein_id=NP_626153.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2021172	2021405	.	-	.	ID=id2433;Dbxref=GeneID:1097321;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 62.70%2C E-value 8.1e-15.;gbkey=misc_feature;gene=SCI7.05c
NC_003888.3	RefSeq	sequence_feature	2021316	2021402	.	-	.	ID=id2434;Dbxref=GeneID:1097321;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCI7.05c
NC_003888.3	RefSeq	gene	2022115	2023845	.	-	.	ID=gene1888;Dbxref=GeneID:1097322;Name=SCI7.06c;gbkey=Gene;gene=SCI7.06c;gene_biotype=protein_coding;gene_synonym=SCI7.06c;locus_tag=SCO1888
NC_003888.3	RefSeq	CDS	2022115	2023845	.	-	0	ID=cds1853;Parent=gene1888;Dbxref=Genbank:NP_626154.1,GeneID:1097322;Name=NP_626154.1;Note=catalyzes the formation of 3-methyl-2-oxobutanoate from 2%2C3%2C-dihydroxy-3-methylbutanoate;gbkey=CDS;gene=SCI7.06c;product=dihydroxy-acid dehydratase;protein_id=NP_626154.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2022283	2023629	.	-	.	ID=id2435;Dbxref=GeneID:1097322;Note=Pfam match to entry PF00920 ILVD_EDD%2C Dehydratase family%2C score 402.40%2C E-value 4.4e-117.;gbkey=misc_feature;gene=SCI7.06c
NC_003888.3	RefSeq	sequence_feature	2023438	2023470	.	-	.	ID=id2436;Dbxref=GeneID:1097322;Note=PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1.;gbkey=misc_feature;gene=SCI7.06c
NC_003888.3	RefSeq	gene	2023842	2024750	.	-	.	ID=gene1889;Dbxref=GeneID:1097323;Name=SCI7.07c;gbkey=Gene;gene=SCI7.07c;gene_biotype=protein_coding;gene_synonym=SCI7.07c;locus_tag=SCO1889
NC_003888.3	RefSeq	CDS	2023842	2024750	.	-	0	ID=cds1854;Parent=gene1889;Dbxref=Genbank:NP_626155.1,GeneID:1097323;Name=NP_626155.1;Note=SCI7.07c%2C probable dihydropicolinate synthase%2C len: 302 aa%3B similar to many e.g. SW:DAPA_BACSU dihydropicolinate synthase from Bacillus subtilis (290 aa) fasta scores%3B opt: 280%2C z-score: 323.5%2C E(): 1.1e-10%2C (28.2%25 identity in 284 aa overlap). Contains Pfam match to entry PF00701 DHDPS%2C Dihydrodipicolinate synthetase family.;gbkey=CDS;gene=SCI7.07c;product=dihydropicolinate synthase;protein_id=NP_626155.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2023896	2024657	.	-	.	ID=id2437;Dbxref=GeneID:1097323;Note=Pfam match to entry PF00701 DHDPS%2C Dihydrodipicolinate synthetase family%2C score 87.70%2C E-value 2.3e-22.;gbkey=misc_feature;gene=SCI7.07c
NC_003888.3	RefSeq	gene	2024747	2025415	.	-	.	ID=gene1890;Dbxref=GeneID:1097324;Name=SCI7.08c;gbkey=Gene;gene=SCI7.08c;gene_biotype=protein_coding;gene_synonym=SCI7.08c;locus_tag=SCO1890
NC_003888.3	RefSeq	CDS	2024747	2025415	.	-	0	ID=cds1855;Parent=gene1890;Dbxref=Genbank:NP_626156.1,GeneID:1097324;Name=NP_626156.1;Note=SCI7.08c%2C probable transcriptional regulator%2C len: 177aa%3B similar to many egs. TR:O50514 (EMBL:AL009204) transcriptional regulator from Streptomyces coelicolor (231 aa) fasta scores%3B opt: 272%2C z-score: 328.8%2C E(): 5.6e-11%2C 934.4%25 identity in 224 aa overlap) and SW:GNTR_BACSU transcriptional regulator of the gluconate operon of Bacillus subtilis (243 aa) fasta scores%3B opt: 217%2C z-score: 264.1%2C E(): 2.2e-07%2C (33.1%25 identity in 127 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family. Also contains a helix-turn-helix motif (+3.07 SD) 35-56aa.;gbkey=CDS;gene=SCI7.08c;product=transcriptional regulator;protein_id=NP_626156.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2025197	2025373	.	-	.	ID=id2438;Dbxref=GeneID:1097324;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 63.00%2C E-value 6.3e-18.;gbkey=misc_feature;gene=SCI7.08c
NC_003888.3	RefSeq	gene	2025584	2026183	.	-	.	ID=gene1891;Dbxref=GeneID:1097325;Name=SCI7.09c;gbkey=Gene;gene=SCI7.09c;gene_biotype=protein_coding;gene_synonym=SCI7.09c;locus_tag=SCO1891
NC_003888.3	RefSeq	CDS	2025584	2026183	.	-	0	ID=cds1856;Parent=gene1891;Dbxref=Genbank:NP_626157.1,GeneID:1097325;Name=NP_626157.1;Note=SCI7.09c%2C hypothetical protein%2C len: 199 aa%3B similar to TR:P71985 (EMBL:Z81360) hypothetical protein from Mycobacterium tuberculosis (189 aa) fasta scores%3B opt: 210%2C z-score: 248.3%2C E(): 1.7e-06%2C (32.4%25 identity in 182 aa overlap).;gbkey=CDS;gene=SCI7.09c;product=hypothetical protein;protein_id=NP_626157.1;transl_table=11
NC_003888.3	RefSeq	gene	2026325	2027572	.	+	.	ID=gene1892;Dbxref=GeneID:1097326;Name=SCI7.10;gbkey=Gene;gene=SCI7.10;gene_biotype=protein_coding;gene_synonym=SCI7.10;locus_tag=SCO1892
NC_003888.3	RefSeq	CDS	2026325	2027572	.	+	0	ID=cds1857;Parent=gene1892;Dbxref=Genbank:NP_626158.1,GeneID:1097326;Name=NP_626158.1;Note=SCI7.10%2C possible integral membrane efflux protein%2C len: 415aa%3B similar to many egs. TR:CAB41206 (EMBL:AL049661) integral membrane efflux protein from Streptomyces coelicolor (500 aa) fasta scores%3B opt: 347%2C z-score: 354.0%2C E(): 2.2e-12%2C (29.7%25 identity in 408 aa overlap) and SW:TCR3_ECOLI tetracycline resistance protein from Escherichia coli (396 aa) fasta scores%3B opt: 241%2C z-score: 249.6%2C E(): 1.4e-06%2C (25.9%25 identity in 398 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI7.10;product=integral membrane efflux protein;protein_id=NP_626158.1;transl_table=11
NC_003888.3	RefSeq	gene	2027561	2027953	.	-	.	ID=gene1893;Dbxref=GeneID:1097327;Name=SCI7.11c;gbkey=Gene;gene=SCI7.11c;gene_biotype=protein_coding;gene_synonym=SCI7.11c;locus_tag=SCO1893
NC_003888.3	RefSeq	CDS	2027561	2027953	.	-	0	ID=cds1858;Parent=gene1893;Dbxref=Genbank:NP_626159.1,GeneID:1097327;Name=NP_626159.1;Note=SCI7.11c%2C possible lyase%2C len: 130aa%3B similar to many egs. TR:O86701 (EMBL:AL031515) lyase from Streptomyces coelicolor (138 aa) fasta scores%3B opt: 153%2C z-score: 201.1%2C E(): 0.00072%2C (30.5%25 identity in 131 aa overlap) and SW:LGUL_ECOLI lactolylglutathione lyase from Escherichia coli (135 aa) fasta scores%3B opt: 111%2C z-score: 150.2%2C E(): 0.49%2C (28.3%25 identity in 138 aa overlap).;gbkey=CDS;gene=SCI7.11c;product=lyase;protein_id=NP_626159.1;transl_table=11
NC_003888.3	RefSeq	gene	2028038	2029210	.	-	.	ID=gene1894;Dbxref=GeneID:1097328;Name=SCI7.12c;gbkey=Gene;gene=SCI7.12c;gene_biotype=protein_coding;gene_synonym=SCI7.12c;locus_tag=SCO1894
NC_003888.3	RefSeq	CDS	2028038	2029210	.	-	0	ID=cds1859;Parent=gene1894;Dbxref=Genbank:NP_626160.1,GeneID:1097328;Name=NP_626160.1;Note=SCI7.12c%2C alanine-rich protein%2C len: 390aa;gbkey=CDS;gene=SCI7.12c;product=hypothetical protein;protein_id=NP_626160.1;transl_table=11
NC_003888.3	RefSeq	gene	2029207	2030157	.	-	.	ID=gene1895;Dbxref=GeneID:1097329;Name=SCI7.13c;gbkey=Gene;gene=SCI7.13c;gene_biotype=protein_coding;gene_synonym=SCI7.13c;locus_tag=SCO1895
NC_003888.3	RefSeq	CDS	2029207	2030157	.	-	0	ID=cds1860;Parent=gene1895;Dbxref=Genbank:NP_626161.1,GeneID:1097329;Name=NP_626161.1;Note=catalyzes the formation of 2%2C5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate;gbkey=CDS;gene=SCI7.13c;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=NP_626161.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2029285	2030061	.	-	.	ID=id2439;Dbxref=GeneID:1097329;Note=Pfam match to entry PF00701 DHDPS%2C Dihydrodipicolinate synthetase family%2C score 251.30%2C E-value 1.3e-71.;gbkey=misc_feature;gene=SCI7.13c
NC_003888.3	RefSeq	gene	2030392	2031201	.	+	.	ID=gene1896;Dbxref=GeneID:1097330;Name=SCI7.14;gbkey=Gene;gene=SCI7.14;gene_biotype=protein_coding;gene_synonym=SCI7.14;locus_tag=SCO1896
NC_003888.3	RefSeq	CDS	2030392	2031201	.	+	0	ID=cds1861;Parent=gene1896;Dbxref=Genbank:NP_626162.1,GeneID:1097330;Name=NP_626162.1;Note=SCI7.14%2C unknown%2C len: 269aa%3B similar to many eg. SW:YTBQ_BACSU hypothetical protein from Bacillus subtilis (253 aa) fasta scores%3B opt: 262%2C z-score: 310.1%2C E(): 6.1e-10%2C (27.8%25 identity in 241 aa overlap).;gbkey=CDS;gene=SCI7.14;product=hypothetical protein;protein_id=NP_626162.1;transl_table=11
NC_003888.3	RefSeq	gene	2031485	2032261	.	+	.	ID=gene1897;Dbxref=GeneID:1097331;Name=SCI7.15;gbkey=Gene;gene=SCI7.15;gene_biotype=protein_coding;gene_synonym=SCI7.15;locus_tag=SCO1897
NC_003888.3	RefSeq	CDS	2031485	2032261	.	+	0	ID=cds1862;Parent=gene1897;Dbxref=Genbank:NP_626163.1,GeneID:1097331;Name=NP_626163.1;Note=SCI7.15%2C probable transcriptional regulator%2C len: 258 aa%3B similar to many e.g. SW:GATR_ECOLI galacticol utilisation operon repressor from Escherichia coli (259 aa) fasta scores%3B opt: 399%2C z-score: 477.4%2C E(): 2.9e-19%2C (33.8%25 identity in 237 aa overlap). Contains Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family. Also contains a helix-turn-helix motif (+3.53 SD) 26-47aa.;gbkey=CDS;gene=SCI7.15;product=transcriptional regulator;protein_id=NP_626163.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2031515	2032195	.	+	.	ID=id2440;Dbxref=GeneID:1097331;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 176.50%2C E-value 4.2e-49.;gbkey=misc_feature;gene=SCI7.15
NC_003888.3	RefSeq	gene	2032364	2033734	.	+	.	ID=gene1898;Dbxref=GeneID:1097332;Name=SCI7.16;gbkey=Gene;gene=SCI7.16;gene_biotype=protein_coding;gene_synonym=SCI7.16;locus_tag=SCO1898
NC_003888.3	RefSeq	CDS	2032364	2033734	.	+	0	ID=cds1863;Parent=gene1898;Dbxref=Genbank:NP_626164.1,GeneID:1097332;Name=NP_626164.1;Note=SCI7.16%2C possible sugar binding protein%2C len: 456aa%3B similar to many eg. TR:O30831 (EMBL:AF018073) periplasmic sorbitol binding protein from Rhodobacter sphaeroides (436 aa) fasta scores%3B opt: 1203%2C z-score: 1347.3%2C E(): 0%2C (42.8%25 identity in 423 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCI7.16;product=substrate binding protein;protein_id=NP_626164.1;transl_table=11
NC_003888.3	RefSeq	gene	2033731	2034675	.	+	.	ID=gene1899;Dbxref=GeneID:1097333;Name=SCI7.17;gbkey=Gene;gene=SCI7.17;gene_biotype=protein_coding;gene_synonym=SCI7.17;locus_tag=SCO1899
NC_003888.3	RefSeq	CDS	2033731	2034675	.	+	0	ID=cds1864;Parent=gene1899;Dbxref=Genbank:NP_626165.1,GeneID:1097333;Name=NP_626165.1;Note=SCI7.17%2C possible integral membrane sugar transport protein%2C len: 314aa%3B similar to many eg. TR:O30832 (EMBL:AF018073) sorbitol/mannitol transport inner membrane protein from Rhodobacter sphaeroides (290 aa) fasta scores%3B opt: 722%2C z-score: 829.0%2C E(): 0%2C (40.6%25 identity in 276 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI7.17;product=integral membrane sugar transport protein;protein_id=NP_626165.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2034322	2034549	.	+	.	ID=id2441;Dbxref=GeneID:1097333;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 66.00%2C E-value 7.8e-16.;gbkey=misc_feature;gene=SCI7.17
NC_003888.3	RefSeq	sequence_feature	2034325	2034411	.	+	.	ID=id2442;Dbxref=GeneID:1097333;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCI7.17
NC_003888.3	RefSeq	gene	2034672	2035550	.	+	.	ID=gene1900;Dbxref=GeneID:1097334;Name=SCI7.18;gbkey=Gene;gene=SCI7.18;gene_biotype=protein_coding;gene_synonym=SCI7.18;locus_tag=SCO1900
NC_003888.3	RefSeq	CDS	2034672	2035550	.	+	0	ID=cds1865;Parent=gene1900;Dbxref=Genbank:NP_626166.1,GeneID:1097334;Name=NP_626166.1;Note=SCI7.18%2C possible integral membrane sugar transport protein%2C len: 292aa%3B similar to many eg. TR:O30833 (EMBL:AF018073) sorbitol/mannitol transport inner membrane protein from Rhodobacter sphaeroides (276 aa) fasta scores%3B opt: 659%2C z-score: 770.4%2C E(): 0%2C (40.6%25 identity in 276 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCI7.18;product=integral membrane sugar transport protein;protein_id=NP_626166.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2035203	2035430	.	+	.	ID=id2443;Dbxref=GeneID:1097334;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 35.20%2C E-value 1.5e-06.;gbkey=misc_feature;gene=SCI7.18
NC_003888.3	RefSeq	gene	2035547	2036536	.	+	.	ID=gene1901;Dbxref=GeneID:1097335;Name=SCI7.19;gbkey=Gene;gene=SCI7.19;gene_biotype=protein_coding;gene_synonym=SCI7.19;locus_tag=SCO1901
NC_003888.3	RefSeq	CDS	2035547	2036536	.	+	0	ID=cds1866;Parent=gene1901;Dbxref=Genbank:NP_626167.1,GeneID:1097335;Name=NP_626167.1;Note=SCI7.19%2C probable zinc-binding dehydrogenase%2C len: 329 aa%3B similar to many e.g. SW:DHSO_BACSU sorbitol dehydrogenase from Bacillus subtilis (352 aa) fasta scores%3B opt: 552%2C z-score: 626.6%2C E(): 1.4e-27%2C (30.1%25 identity in 345 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and Prosite match to PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=CDS;gene=SCI7.19;product=zinc-binding dehydrogenase;protein_id=NP_626167.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2035565	2036530	.	+	.	ID=id2444;Dbxref=GeneID:1097335;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 218.50%2C E-value 9.8e-62.;gbkey=misc_feature;gene=SCI7.19
NC_003888.3	RefSeq	sequence_feature	2035715	2035759	.	+	.	ID=id2445;Dbxref=GeneID:1097335;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=misc_feature;gene=SCI7.19
NC_003888.3	RefSeq	gene	2036555	2036944	.	+	.	ID=gene1902;Dbxref=GeneID:1097336;Name=SCI7.20;gbkey=Gene;gene=SCI7.20;gene_biotype=protein_coding;gene_synonym=SCI7.20;locus_tag=SCO1902
NC_003888.3	RefSeq	CDS	2036555	2036944	.	+	0	ID=cds1867;Parent=gene1902;Dbxref=Genbank:NP_626168.1,GeneID:1097336;Name=NP_626168.1;Note=SCI7.20%2C unknown%2C hydrophilic%2C len: 129aa;gbkey=CDS;gene=SCI7.20;product=hypothetical protein;protein_id=NP_626168.1;transl_table=11
NC_003888.3	RefSeq	gene	2037030	2038229	.	+	.	ID=gene1903;Dbxref=GeneID:1097337;Name=SCI7.21;gbkey=Gene;gene=SCI7.21;gene_biotype=protein_coding;gene_synonym=SCI7.21;locus_tag=SCO1903
NC_003888.3	RefSeq	CDS	2037030	2038229	.	+	0	ID=cds1868;Parent=gene1903;Dbxref=Genbank:NP_626169.1,GeneID:1097337;Name=NP_626169.1;Note=SCI7.21%2C possible transport associated protein%2C len: 399aa%3B appears to be the last gene in a possible sugar transport operon%2C similar to many eg. TR:CAB38155 (EMBL:AL035591) export associated protein from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 475%2C z-score: 388.5%2C E(): 2.6e-14%2C (43.6%25 identity in 188 aa overlap) and TR:CAA22211 (EMBL:AL034355) hypothetical protein from Streptomyces coelicolor (482 aa) fasta scores%3B opt: 534%2C z-score: 428.9%2C E(): 1.5e-16%2C (42.3%25 identity in 260 aa overlap) and SW:TERZ_SERMA tellurium resistance protein%2C TerZ from Serratia marcescens (193 aa) fasta scores%3B opt: 429%2C z-score: 352.8%2C E(): 2.6e-12%2C (47.6%25 identity in 185 aa overlap).;gbkey=CDS;gene=SCI7.21;product=transport associated protein;protein_id=NP_626169.1;transl_table=11
NC_003888.3	RefSeq	gene	2038269	2038877	.	-	.	ID=gene1904;Dbxref=GeneID:1097338;Name=SCI7.22c;gbkey=Gene;gene=SCI7.22c;gene_biotype=protein_coding;gene_synonym=SCI7.22c;locus_tag=SCO1904
NC_003888.3	RefSeq	CDS	2038269	2038877	.	-	0	ID=cds1869;Parent=gene1904;Dbxref=Genbank:NP_626170.1,GeneID:1097338;Name=NP_626170.1;Note=SCI7.22c%2C probable transcriptional regulator%2C len: 202 aa%3B similar to many e.g. TR:CAA22690 (EMBL:AL035159) transcriptional regulator from Mycobacterium leprae (189 aa) fasta scores%3B opt: 353%2C z-score: 418.1%2C E(): 5.9e-16%2C (38.6%25 identity in 189 aa overlap) and TR:O24739 (EMBL:AB001609) butyrolactone synthesis transcriptional regulator in Streptomyces virginiae (216 aa) fasta scores%3B opt: 191%2C z-score: 231.1%2C E(): 1.5e-05%2C (35.0%25 identity in 163 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Also contains a helix-turn-helix motif (+5.38 SD) 46-67aa.;gbkey=CDS;gene=SCI7.22c;product=transcriptional regulator;protein_id=NP_626170.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2038653	2038790	.	-	.	ID=id2446;Dbxref=GeneID:1097338;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.90%2C E-value 5.1e-11.;gbkey=misc_feature;gene=SCI7.22c
NC_003888.3	RefSeq	gene	2038879	2040480	.	-	.	ID=gene1905;Dbxref=GeneID:1097339;Name=SCI7.23c;gbkey=Gene;gene=SCI7.23c;gene_biotype=protein_coding;gene_synonym=SCI7.23c;locus_tag=SCO1905
NC_003888.3	RefSeq	CDS	2038879	2040480	.	-	0	ID=cds1870;Parent=gene1905;Dbxref=Genbank:NP_626171.1,GeneID:1097339;Name=NP_626171.1;Note=SCI7.23c%2C unknown%2C len: 533aa;gbkey=CDS;gene=SCI7.23c;product=hypothetical protein;protein_id=NP_626171.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2040974	2040979	.	+	.	ID=id2447;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	2040974	2040979	.	-	.	ID=id2448;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2040979	2042451	.	-	.	ID=gene1906;Dbxref=GeneID:1097340;Name=SCI7.24c;gbkey=Gene;gene=SCI7.24c;gene_biotype=protein_coding;gene_synonym=SCI7.24c;locus_tag=SCO1906
NC_003888.3	RefSeq	CDS	2040979	2042451	.	-	0	ID=cds1871;Parent=gene1906;Dbxref=Genbank:NP_626172.1,GeneID:1097340;Name=NP_626172.1;Note=SCI7.24c%2C hypothetical protein%2C len: 490 aa%3B similar to TR:O69840 (EMBL:AL023517) hypothetical protein from Streptomyces coelicolor (465 aa) fasta scores%3B opt: 1059%2C z-score: 1178.4%2C E(): 0%2C (48.1%25 identity in 495 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCI7.24c;product=hypothetical protein;protein_id=NP_626172.1;transl_table=11
NC_003888.3	RefSeq	gene	2042736	2044163	.	-	.	ID=gene1907;Dbxref=GeneID:1097341;Name=SCI7.25c;gbkey=Gene;gene=SCI7.25c;gene_biotype=protein_coding;gene_synonym=SCI7.25c;locus_tag=SCO1907
NC_003888.3	RefSeq	CDS	2042736	2044163	.	-	0	ID=cds1872;Parent=gene1907;Dbxref=Genbank:NP_626173.1,GeneID:1097341;Name=NP_626173.1;Note=SCI7.25c%2C unknown%2C len: 475aa%3B contains Prosite match to PS00213 Lipocalin signature. Similar to TR:Q9RJ26 (EMBL:AL132644) SCI8.27C hypothetical protein from Streptomyces coelicolor (447 aa) fasta scores%3B opt: 380%2C Z-score: 401.6%2C E(): 9.7e-15%2C 32.114%25 identity (38.257%25 ungapped) in 492 aa overlap.;gbkey=CDS;gene=SCI7.25c;product=hypothetical protein;protein_id=NP_626173.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2043804	2043845	.	-	.	ID=id2449;Dbxref=GeneID:1097341;Note=PS00213 Lipocalin signature.;gbkey=misc_feature;gene=SCI7.25c
NC_003888.3	RefSeq	gene	2044380	2046221	.	+	.	ID=gene1908;Dbxref=GeneID:1097342;Name=SCI7.26;gbkey=Gene;gene=SCI7.26;gene_biotype=protein_coding;gene_synonym=SCI7.26;locus_tag=SCO1908
NC_003888.3	RefSeq	CDS	2044380	2046221	.	+	0	ID=cds1873;Parent=gene1908;Dbxref=Genbank:NP_626174.1,GeneID:1097342;Name=NP_626174.1;Note=SCI7.26%2C possible large hypothetical protein%2C len: 613aa%3B similar to TR:O83555 (EMBL:AE001229) hypothetical protein from Treponema pallidum (622 aa) fasta scores%3B opt: 478%2C z-score: 514.7%2C E(): 2.4e-21%2C (34.0%25 identity in 633 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCI7.26;product=large hypothetical protein;protein_id=NP_626174.1;transl_table=11
NC_003888.3	RefSeq	gene	2046252	2046959	.	-	.	ID=gene1909;Dbxref=GeneID:1097343;Name=SCI7.27c;gbkey=Gene;gene=SCI7.27c;gene_biotype=protein_coding;gene_synonym=SCI7.27c;locus_tag=SCO1909
NC_003888.3	RefSeq	CDS	2046252	2046959	.	-	0	ID=cds1874;Parent=gene1909;Dbxref=Genbank:NP_626175.1,GeneID:1097343;Name=NP_626175.1;Note=SCI7.27c%2C unknown%2C len: 235aa;gbkey=CDS;gene=SCI7.27c;product=hypothetical protein;protein_id=NP_626175.1;transl_table=11
NC_003888.3	RefSeq	gene	2047117	2047614	.	-	.	ID=gene1910;Dbxref=GeneID:1097344;Name=SCI7.28c;gbkey=Gene;gene=SCI7.28c;gene_biotype=protein_coding;gene_synonym=SCI7.28c;locus_tag=SCO1910
NC_003888.3	RefSeq	CDS	2047117	2047614	.	-	0	ID=cds1875;Parent=gene1910;Dbxref=Genbank:NP_626176.1,GeneID:1097344;Name=NP_626176.1;Note=SCI7.28c%2C possible alanine-rich protein%2C len: 165 aa%3B contains 3 x H**H*KAGRA* repeat region. Largely hydrophilic. Contains possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=SCI7.28c;product=alanine-rich protein;protein_id=NP_626176.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2047270	2047368	.	+	.	ID=id2450;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2047611	2048108	.	-	.	ID=gene1911;Dbxref=GeneID:1097345;Name=SCI7.29c;gbkey=Gene;gene=SCI7.29c;gene_biotype=protein_coding;gene_synonym=SCI7.29c;locus_tag=SCO1911
NC_003888.3	RefSeq	CDS	2047611	2048108	.	-	0	ID=cds1876;Parent=gene1911;Dbxref=Genbank:NP_626177.1,GeneID:1097345;Name=NP_626177.1;Note=SCI7.29c%2C possible integral membrane protein%2C len: 165aa%3B similar to others from Mycobacterium tuberculosis and Streptomyces coelicolor egs. TR:O69637 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (172 aa) fasta scores%3B opt: 194%2C z-score: 223.8%2C E(): 3.9e-05%2C (30.6%25 identity in 134 aa overlap) and SW:CAA22031 (EMBL:AL033505)  membrane protein from Streptomyces coelicolor (205 aa) fasta scores%3B opt: 187%2C z-score: 215.2%2C E(): 0.00012%2C (33.8%25 identity in 130 aa overlap). Contains possible membrane spanning hydrophobic region. Also contains a helix-turn-helix motif (+3.21 SD) 39-60aa.;gbkey=CDS;gene=SCI7.29c;product=hypothetical protein;protein_id=NP_626177.1;transl_table=11
NC_003888.3	RefSeq	gene	2048176	2049129	.	+	.	ID=gene1912;Dbxref=GeneID:1097346;Name=SCI7.30;gbkey=Gene;gene=SCI7.30;gene_biotype=protein_coding;gene_synonym=SCI7.30;locus_tag=SCO1912
NC_003888.3	RefSeq	CDS	2048176	2049129	.	+	0	ID=cds1877;Parent=gene1912;Dbxref=Genbank:NP_626178.1,GeneID:1097346;Name=NP_626178.1;Note=catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis;gbkey=CDS;gene=SCI7.30;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=NP_626178.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2048299	2049054	.	+	.	ID=id2451;Dbxref=GeneID:1097346;Note=Pfam match to entry PF00701 DHDPS%2C Dihydrodipicolinate synthetase family%2C score 261.60%2C E-value 1.1e-74.;gbkey=misc_feature;gene=SCI7.30
NC_003888.3	RefSeq	sequence_feature	2048347	2048400	.	+	.	ID=id2452;Dbxref=GeneID:1097346;Note=PS00665 Dihydrodipicolinate synthetase signature 1.;gbkey=misc_feature;gene=SCI7.30
NC_003888.3	RefSeq	sequence_feature	2048632	2048724	.	+	.	ID=id2453;Dbxref=GeneID:1097346;Note=PS00666 Dihydrodipicolinate synthetase signature 2.;gbkey=misc_feature;gene=SCI7.30
NC_003888.3	RefSeq	gene	2049114	2049380	.	-	.	ID=gene1913;Dbxref=GeneID:1097347;Name=SCI7.31c;gbkey=Gene;gene=SCI7.31c;gene_biotype=protein_coding;gene_synonym=SCI7.31c;locus_tag=SCO1913
NC_003888.3	RefSeq	CDS	2049114	2049380	.	-	0	ID=cds1878;Parent=gene1913;Dbxref=Genbank:NP_626179.1,GeneID:1097347;Name=NP_626179.1;Note=SCI7.31c%2C possible small membrane protein%2C len: 88 aa%3B contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCI7.31c;product=small membrane protein;protein_id=NP_626179.1;transl_table=11
NC_003888.3	RefSeq	gene	2049519	2049689	.	+	.	ID=gene1914;Dbxref=GeneID:1097348;Name=SCI7.32;gbkey=Gene;gene=SCI7.32;gene_biotype=protein_coding;gene_synonym=SCI7.32;locus_tag=SCO1914
NC_003888.3	RefSeq	CDS	2049519	2049689	.	+	0	ID=cds1879;Parent=gene1914;Dbxref=Genbank:NP_626180.1,GeneID:1097348;Name=NP_626180.1;Note=SCI7.32%2C unknown%2C len: 56aa;gbkey=CDS;gene=SCI7.32;product=hypothetical protein;protein_id=NP_626180.1;transl_table=11
NC_003888.3	RefSeq	gene	2049745	2050473	.	+	.	ID=gene1915;Dbxref=GeneID:1097349;Name=SCI7.33;gbkey=Gene;gene=SCI7.33;gene_biotype=protein_coding;gene_synonym=SCI7.33;locus_tag=SCO1915
NC_003888.3	RefSeq	CDS	2049745	2050473	.	+	0	ID=cds1880;Parent=gene1915;Dbxref=Genbank:NP_626181.1,GeneID:1097349;Name=NP_626181.1;Note=SCI7.33%2C unknown%2C len: 242aa;gbkey=CDS;gene=SCI7.33;product=hypothetical protein;protein_id=NP_626181.1;transl_table=11
NC_003888.3	RefSeq	gene	2050524	2051513	.	-	.	ID=gene1916;Dbxref=GeneID:1097350;Name=SCI7.34c;gbkey=Gene;gene=SCI7.34c;gene_biotype=protein_coding;gene_synonym=SCI7.34c;locus_tag=SCO1916
NC_003888.3	RefSeq	CDS	2050524	2051513	.	-	0	ID=cds1881;Parent=gene1916;Dbxref=Genbank:NP_626182.1,GeneID:1097350;Name=NP_626182.1;Note=SCI7.34c%2C possible transferase%2C len: 329 aa%3B similar to many e.g. TR:BAA75911 (EMBL:AB024601) tetrahydrodipicolinate N-succinyltransferase from Pseudomonas aeruginosa (344 aa) fasta scores%3B opt: 1004%2C z-score: 1062.7%2C E(): 0%2C (54.4%25 identity in 307 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCI7.34c;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=NP_626182.1;transl_table=11
NC_003888.3	RefSeq	gene	2051523	2052116	.	-	.	ID=gene1917;Dbxref=GeneID:1097351;Name=SCI7.35c;gbkey=Gene;gene=SCI7.35c;gene_biotype=protein_coding;gene_synonym=SCI7.35c;locus_tag=SCO1917
NC_003888.3	RefSeq	CDS	2051523	2052116	.	-	0	ID=cds1882;Parent=gene1917;Dbxref=Genbank:NP_626183.1,GeneID:1097351;Name=NP_626183.1;Note=SCI7.35c%2C unknown%2C len: 197aa%3B similar to many eg. TR:P95092 (EMBL:Z83866) hypothetical protein from Mycobacterium tuberculosis (202 aa) fasta scores%3B opt: 398%2C z-score: 482.3%2C E(): 1.6e-19%2C (40.3%25 identity in 191 aa overlap).;gbkey=CDS;gene=SCI7.35c;product=hypothetical protein;protein_id=NP_626183.1;transl_table=11
NC_003888.3	RefSeq	gene	2052116	2052436	.	-	.	ID=gene1918;Dbxref=GeneID:1097352;Name=SCI7.36c;gbkey=Gene;gene=SCI7.36c;gene_biotype=protein_coding;gene_synonym=SCI7.36c;locus_tag=SCO1918
NC_003888.3	RefSeq	CDS	2052116	2052436	.	-	0	ID=cds1883;Parent=gene1918;Dbxref=Genbank:NP_626184.1,GeneID:1097352;Name=NP_626184.1;Note=SCI7.36c%2C possible integral membrane protein%2C len: 106aa%3B similar to many proposed to be involved in resistance mechanisms eg. SW:EMRE_ECOLI viologen resistance protein from Escherichia coli (110 aa) fasta scores%3B opt: 313%2C z-score: 392.7%2C E(): 1.5e-14%2C (51.0%25 identity in 100 aa overlap). Contains Pfam match to entry PF00893 DUF7%2C Integral membrane protein.;gbkey=CDS;gene=SCI7.36c;product=hypothetical protein;protein_id=NP_626184.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2052158	2052436	.	-	.	ID=id2454;Dbxref=GeneID:1097352;Note=Pfam match to entry PF00893 DUF7%2C Integral membrane protein%2C score 117.60%2C E-value 2.3e-31.;gbkey=misc_feature;gene=SCI7.36c
NC_003888.3	RefSeq	gene	2052555	2052887	.	-	.	ID=gene1919;Dbxref=GeneID:1097353;Name=SCC22.01c;gbkey=Gene;gene=SCC22.01c;gene_biotype=protein_coding;gene_synonym=SCC22.01c,SCI7.37c;locus_tag=SCO1919
NC_003888.3	RefSeq	CDS	2052555	2052887	.	-	0	ID=cds1884;Parent=gene1919;Dbxref=Genbank:NP_733551.1,GeneID:1097353;Name=NP_733551.1;Note=SCC22.01c%2C partial CDS%2C conserved hypothetical protein%2C len: >75aa%3B similar to many other hypothetical proteins eg. TR:O53157 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (115 aa) fasta scores%3B opt: 284%2C z-score: 392.0%2C E(): 1.7e-14%2C (61.3%25 identity in 80 aa overlap).~SCI7.37c%2C partial CDS%2C unknown%2C len: >74aa%3B similar to TR:O53157 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (115 aa) fasta scores%3B opt: 375%2C z-score: 536.1%2C E(): 1.6e-22%2C (70.1%25 identity in 77 aa overlap).;gbkey=CDS;gene=SCC22.01c;product=hypothetical protein;protein_id=NP_733551.1;transl_table=11
NC_003888.3	RefSeq	gene	2052884	2053354	.	-	.	ID=gene1920;Dbxref=GeneID:1097354;Name=SCC22.02c;gbkey=Gene;gene=SCC22.02c;gene_biotype=protein_coding;gene_synonym=SCC22.02c;locus_tag=SCO1920
NC_003888.3	RefSeq	CDS	2052884	2053354	.	-	0	ID=cds1885;Parent=gene1920;Dbxref=Genbank:NP_626185.1,GeneID:1097354;Name=NP_626185.1;Note=SCC22.02c%2C conserved hypothetical protein%2C len: 156aa%3B similar to many other hypothetical protein eg. TR:O53156 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (162 aa) fasta scores%3B opt: 569%2C z-score: 685.8%2C E(): 7.2e-31%2C (56.3%25 identity in 158 aa overlap) and to SW:NIFU_BACSU (EMBL:Z99120) Bacillus subtilis NifU-like protein NifU%2C 147 aa%3B fasta scores: opt: 439 Z-score: 527.7 E(): 9.3e-22%3B 45.517%25 identity in 145 aa overlap;gbkey=CDS;gene=SCC22.02c;product=hypothetical protein;protein_id=NP_626185.1;transl_table=11
NC_003888.3	RefSeq	gene	2053372	2054628	.	-	.	ID=gene1921;Dbxref=GeneID:1097355;Name=SCC22.03c;gbkey=Gene;gene=SCC22.03c;gene_biotype=protein_coding;gene_synonym=SCC22.03c;locus_tag=SCO1921
NC_003888.3	RefSeq	CDS	2053372	2054628	.	-	0	ID=cds1886;Parent=gene1921;Dbxref=Genbank:NP_626186.1,GeneID:1097355;Name=NP_626186.1;Note=SCC22.03c%2C possible aminotransferase%2C len: 418 aa%3B similar to many proposed aminotransferase/nifS-like proteins e.g. TR:Q49690 (EMBL:U00013) NifS from Mycobacterium leprae (418 aa) fasta scores%3B opt: 1438%2C z-score: 1673.0%2C E(): 0%2C (53.4%25 identity in 414 aa overlap). Contains Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V.;gbkey=CDS;gene=SCC22.03c;product=aminotransferase;protein_id=NP_626186.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2053411	2054505	.	-	.	ID=id2455;Dbxref=GeneID:1097355;Note=Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V%2C score 29.60%2C E-value 8.5e-09.;gbkey=misc_feature;gene=SCC22.03c
NC_003888.3	RefSeq	gene	2054625	2055389	.	-	.	ID=gene1922;Dbxref=GeneID:1097356;Name=SCC22.04c;gbkey=Gene;gene=SCC22.04c;gene_biotype=protein_coding;gene_synonym=SCC22.04c;locus_tag=SCO1922
NC_003888.3	RefSeq	CDS	2054625	2055389	.	-	0	ID=cds1887;Parent=gene1922;Dbxref=Genbank:NP_626187.1,GeneID:1097356;Name=NP_626187.1;Note=SCC22.04c%2C possible ABC transporter ATP-binding subunit%2C len: 254aa%3B similar to many proposed ABC transporter subunit eg. SW:ABCX_CYAPA probable ATP-dependent transporter from Cyanophora paradoxa (259 aa) fasta scores%3B opt: 856%2C z-score: 945.3%2C E(): 0%2C (55.3%25 identity in 246 aa overlap). Also highly similar to TR:O53154 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (266 aa) fasta scores%3B opt: 1258%2C z-score: 1383.7%2C E(): 0%2C (76.9%25 identity in 251 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCC22.04c;product=ABC transporter ATP-binding protein;protein_id=NP_626187.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2054715	2055293	.	-	.	ID=id2456;Dbxref=GeneID:1097356;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 119.10%2C E-value 8.4e-32.;gbkey=misc_feature;gene=SCC22.04c
NC_003888.3	RefSeq	sequence_feature	2055249	2055272	.	-	.	ID=id2457;Dbxref=GeneID:1097356;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCC22.04c
NC_003888.3	RefSeq	gene	2055397	2055714	.	-	.	ID=gene1923;Dbxref=GeneID:1097357;Name=SCC22.05c;gbkey=Gene;gene=SCC22.05c;gene_biotype=protein_coding;gene_synonym=SCC22.05c;locus_tag=SCO1923
NC_003888.3	RefSeq	CDS	2055397	2055714	.	-	0	ID=cds1888;Parent=gene1923;Dbxref=Genbank:NP_626188.1,GeneID:1097357;Name=NP_626188.1;Note=SCC22.05c%2C possible dioxygenase ferredoxin subunit%2C len: 105 aa%3B similar to many e.g. SW:BEDB_PSEPU benzene dioxygenase from Pseudomonas putida ML2 (107 aa) fasta scores%3B opt: 286%2C z-score: 390.9%2C E(): 1.9e-14%2C (40.6%25 identity in 101 aa overlap);gbkey=CDS;gene=SCC22.05c;product=dioxygenase ferredoxin subunit;protein_id=NP_626188.1;transl_table=11
NC_003888.3	RefSeq	gene	2055711	2056895	.	-	.	ID=gene1924;Dbxref=GeneID:1097358;Name=SCC22.06c;gbkey=Gene;gene=SCC22.06c;gene_biotype=protein_coding;gene_synonym=SCC22.06c;locus_tag=SCO1924
NC_003888.3	RefSeq	CDS	2055711	2056895	.	-	0	ID=cds1889;Parent=gene1924;Dbxref=Genbank:NP_626189.1,GeneID:1097358;Name=NP_626189.1;Note=SCC22.06c%2C conserved hypothetical protein%2C len: 394aa%3B similar to many eg. TR:O53153 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (397 aa) fasta scores%3B opt: 1446%2C z-score: 1649.9%2C E(): 0%2C (58.0%25 identity in 388 aa overlap). Contains Pfam match to entry PF01458 UPF0051%2C Uncharacterized protein family (UPF0051).;gbkey=CDS;gene=SCC22.06c;product=hypothetical protein;protein_id=NP_626189.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2055792	2056538	.	-	.	ID=id2458;Dbxref=GeneID:1097358;Note=Pfam match to entry PF01458 UPF0051%2C Uncharacterized protein family (UPF0051)%2C score 224.10%2C E-value 2e-63.;gbkey=misc_feature;gene=SCC22.06c
NC_003888.3	RefSeq	gene	2056956	2058377	.	-	.	ID=gene1925;Dbxref=GeneID:1097359;Name=SCC22.07c;gbkey=Gene;gene=SCC22.07c;gene_biotype=protein_coding;gene_synonym=SCC22.07c;locus_tag=SCO1925
NC_003888.3	RefSeq	CDS	2056956	2058377	.	-	0	ID=cds1890;Parent=gene1925;Dbxref=Genbank:NP_626190.1,GeneID:1097359;Name=NP_626190.1;Note=SCC22.07c%2C conserved hypothetical protein%2C len: 473aa%3B similar to many eg. TR:O32162 (EMBL:Z99120) hypothetical protein from Bacillus subtilis (465 aa) fasta scores%3B opt: 2087%2C z-score: 2451.5%2C E(): 0%2C (64.6%25 identity in 463 aa overlap). Also similar to the N-terminal region and the C-terminal region of TR:O53152 (EMBL:AL021184) hypothetical splice protein from Mycobacterium tuberculosis (846 aa) fasta scores%3B opt: 1367%2C z-score: 1602.5%2C E(): 0%2C (47.5%25 identity in 832 aa overlap). Contains Pfam match to entry PF01458 UPF0051%2C Uncharacterized protein family (UPF0051).;gbkey=CDS;gene=SCC22.07c;product=hypothetical protein;protein_id=NP_626190.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2057034	2057795	.	-	.	ID=id2459;Dbxref=GeneID:1097359;Note=Pfam match to entry PF01458 UPF0051%2C Uncharacterized protein family (UPF0051)%2C score 494.70%2C E-value 7.1e-145.;gbkey=misc_feature;gene=SCC22.07c
NC_003888.3	RefSeq	gene	2058374	2059132	.	-	.	ID=gene1926;Dbxref=GeneID:1097360;Name=SCC22.08c;gbkey=Gene;gene=SCC22.08c;gene_biotype=protein_coding;gene_synonym=SCC22.08c;locus_tag=SCO1926
NC_003888.3	RefSeq	CDS	2058374	2059132	.	-	0	ID=cds1891;Parent=gene1926;Dbxref=Genbank:NP_626191.1,GeneID:1097360;Name=NP_626191.1;Note=SCC22.08c%2C possible DNA-binding protein%2C len: 252aa%3B similar to TR:O53151 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (278 aa) fasta scores%3B opt: 629%2C z-score: 705.6%2C E(): 5.8e-32%2C (46.8%25 identity in 233 aa overlap). Contains a helix-turn-helix motif (+4.75 SD) at residues 34-55;gbkey=CDS;gene=SCC22.08c;product=DNA-binding protein;protein_id=NP_626191.1;transl_table=11
NC_003888.3	RefSeq	gene	2059304	2060092	.	+	.	ID=gene1927;Dbxref=GeneID:1097361;Name=SCC22.09;gbkey=Gene;gene=SCC22.09;gene_biotype=protein_coding;gene_synonym=SCC22.09;locus_tag=SCO1927
NC_003888.3	RefSeq	CDS	2059304	2060092	.	+	0	ID=cds1892;Parent=gene1927;Dbxref=Genbank:NP_626192.1,GeneID:1097361;Name=NP_626192.1;Note=SCC22.09%2C possible aminoglycoside acetyltransferase%2C len: 262 aa%3B similar to many e.g. SW:AAC8_STRFR aminoglycoside acetyltransferase from Streptomyces fradiae (286 aa) fasta scores%3B opt: 502%2C z-score: 576.5%2C E(): 8.9e-25%2C (40.4%25 identity in 270 aa overlap);gbkey=CDS;gene=SCC22.09;product=AAC(3) family N-acetyltransferase;protein_id=NP_626192.1;transl_table=11
NC_003888.3	RefSeq	gene	2060169	2061092	.	+	.	ID=gene1928;Dbxref=GeneID:1097362;Name=SCC22.10;gbkey=Gene;gene=SCC22.10;gene_biotype=protein_coding;gene_synonym=SCC22.10;locus_tag=SCO1928
NC_003888.3	RefSeq	CDS	2060169	2061092	.	+	0	ID=cds1893;Parent=gene1928;Dbxref=Genbank:NP_626193.1,GeneID:1097362;Name=NP_626193.1;Note=SCC22.10%2C possible ABC transporter%2C ATP-binding subunit%2C len: 307aa%3B similar to many egs. SW:DRRA_STRPE daunorubicin resistance ATP-binding protein from Streptomyces peucetius (330 aa) fasta scores%3B opt: 571%2C z-score: 637.1%2C E(): 3.7e-28%2C (35.6%25 identity in 315 aa overlap) and TR:O53149 (EMBL:AL021184) ABC transporter%2C ATP-binding protein from Mycobacterium tuberculosis (313 aa) fasta scores%3B opt: 1170%2C z-score: 1297.6%2C E(): 0%2C (60.9%25 identity in 304 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature.;gbkey=CDS;gene=SCC22.10;product=ABC transporter ATP-binding protein;protein_id=NP_626193.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2060259	2060789	.	+	.	ID=id2460;Dbxref=GeneID:1097362;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 154.80%2C E-value 1.4e-42.;gbkey=misc_feature;gene=SCC22.10
NC_003888.3	RefSeq	sequence_feature	2060280	2060303	.	+	.	ID=id2461;Dbxref=GeneID:1097362;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCC22.10
NC_003888.3	RefSeq	sequence_feature	2060562	2060606	.	+	.	ID=id2462;Dbxref=GeneID:1097362;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SCC22.10
NC_003888.3	RefSeq	gene	2061089	2061898	.	+	.	ID=gene1929;Dbxref=GeneID:1097363;Name=SCC22.11;gbkey=Gene;gene=SCC22.11;gene_biotype=protein_coding;gene_synonym=SCC22.11;locus_tag=SCO1929
NC_003888.3	RefSeq	CDS	2061089	2061898	.	+	0	ID=cds1894;Parent=gene1929;Dbxref=Genbank:NP_626194.1,GeneID:1097363;Name=NP_626194.1;Note=SCC22.11%2C possible integral membrane transport protein%2C len: 269aa%3B function predicted as it contains possible membrane spanning hydrophobic regions and is located alongside a possible ABC transport ATP-binding protein (SCC22.10). Similar to egs. TR:O86349 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (261 aa) fasta scores%3B opt: 627%2C z-score: 670.8%2C E(): 4.9e-30%2C (43.6%25 identity in 264 aa overlap) and TR:AAD20380 (EMBL:AF125999) daunorubicin resistance protei n C from Mycobacterium avium (263 aa) fasta scores%3B opt: 266%2C z-score: 291.2%2C E(): 7e-09%2C (29.6%25 identity in 247 aa overlap).;gbkey=CDS;gene=SCC22.11;product=integral membrane transport protein;protein_id=NP_626194.1;transl_table=11
NC_003888.3	RefSeq	gene	2061905	2062975	.	+	.	ID=gene1930;Dbxref=GeneID:1097364;Name=SCC22.12;gbkey=Gene;gene=SCC22.12;gene_biotype=protein_coding;gene_synonym=SCC22.12;locus_tag=SCO1930
NC_003888.3	RefSeq	CDS	2061905	2062975	.	+	0	ID=cds1895;Parent=gene1930;Dbxref=Genbank:NP_626195.1,GeneID:1097364;Name=NP_626195.1;Note=SCC22.12%2C possible integral membrane transport protein%2C len: 356aa%3B function predicted as it contains possible membrane spanning hydrophobic regions and is located alongside a possible ABC transport ATP-binding protein (SCC22.10). Similar to TR:O53148 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (310 aa) fasta scores%3B opt: 527%2C z-score: 648.1%2C E(): 9.2e-29%2C (35.0%25 identity in 300 aa overlap).;gbkey=CDS;gene=SCC22.12;product=integral membrane transport protein;protein_id=NP_626195.1;transl_table=11
NC_003888.3	RefSeq	gene	2062930	2063709	.	-	.	ID=gene1931;Dbxref=GeneID:1097365;Name=SCC22.13c;gbkey=Gene;gene=SCC22.13c;gene_biotype=protein_coding;gene_synonym=SCC22.13c;locus_tag=SCO1931
NC_003888.3	RefSeq	CDS	2062930	2063709	.	-	0	ID=cds1896;Parent=gene1931;Dbxref=Genbank:NP_626196.1,GeneID:1097365;Name=NP_626196.1;Note=SCC22.13c%2C unknown%2C len: 259aa;gbkey=CDS;gene=SCC22.13c;product=hypothetical protein;protein_id=NP_626196.1;transl_table=11
NC_003888.3	RefSeq	gene	2063713	2064819	.	-	.	ID=gene1932;Dbxref=GeneID:1097366;Name=SCC22.14c;gbkey=Gene;gene=SCC22.14c;gene_biotype=protein_coding;gene_synonym=SCC22.14c;locus_tag=SCO1932
NC_003888.3	RefSeq	CDS	2063713	2064819	.	-	0	ID=cds1897;Parent=gene1932;Dbxref=Genbank:NP_626197.1,GeneID:1097366;Name=NP_626197.1;Note=SCC22.14c%2C unknown%2C len: 368aa%3B similar to TR:O07751 (EMBL:Z97193) hypothetical protein from Mycobacterium tuberculosis (378 aa) fasta scores%3B opt: 772%2C z-score: 899.4%2C E(): 0%2C (40.3%25 identity in 372 aa overlap).;gbkey=CDS;gene=SCC22.14c;product=hypothetical protein;protein_id=NP_626197.1;transl_table=11
NC_003888.3	RefSeq	gene	2064934	2065368	.	-	.	ID=gene1933;Dbxref=GeneID:1097367;Name=SCC22.15c;gbkey=Gene;gene=SCC22.15c;gene_biotype=protein_coding;gene_synonym=SCC22.15c;locus_tag=SCO1933
NC_003888.3	RefSeq	CDS	2064934	2065368	.	-	0	ID=cds1898;Parent=gene1933;Dbxref=Genbank:NP_626198.1,GeneID:1097367;Name=NP_626198.1;Note=SCC22.15c%2C unknown%2C len: 144aa;gbkey=CDS;gene=SCC22.15c;product=hypothetical protein;protein_id=NP_626198.1;transl_table=11
NC_003888.3	RefSeq	gene	2065389	2066411	.	-	.	ID=gene1934;Dbxref=GeneID:1097368;Name=SCC22.16c;gbkey=Gene;gene=SCC22.16c;gene_biotype=protein_coding;gene_synonym=SCC22.16c;locus_tag=SCO1934
NC_003888.3	RefSeq	CDS	2065389	2066411	.	-	0	ID=cds1899;Parent=gene1934;Dbxref=Genbank:NP_626199.1,GeneID:1097368;Name=NP_626199.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;gene=SCC22.16c;product=protoheme IX farnesyltransferase;protein_id=NP_626199.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2065398	2066222	.	-	.	ID=id2463;Dbxref=GeneID:1097368;Note=Pfam match to entry PF01040 COX10_ctaB_cyoE%2C Cytochrome c oxidase assembly factor%2C score 326.00%2C E-value 4.3e-94.;gbkey=misc_feature;gene=SCC22.16c
NC_003888.3	RefSeq	sequence_feature	2066028	2066078	.	-	.	ID=id2464;Dbxref=GeneID:1097368;Note=PS00943 Cytochrome c oxidase assembly factor COX10/ctaB/cyoE signature%2C [ED].D.{2}M.RT.{2}R.{4}G%2C info count %3D 28.9.;gbkey=misc_feature;gene=SCC22.16c
NC_003888.3	RefSeq	gene	2066713	2068800	.	+	.	ID=gene1935;Dbxref=GeneID:1097369;Name=SCC22.17;gbkey=Gene;gene=SCC22.17;gene_biotype=protein_coding;gene_synonym=SCC22.17,tktA1;locus_tag=SCO1935
NC_003888.3	RefSeq	CDS	2066713	2068800	.	+	0	ID=cds1900;Parent=gene1935;Dbxref=Genbank:NP_626200.1,GeneID:1097369;Name=NP_626200.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;gene=SCC22.17;product=transketolase;protein_id=NP_626200.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2066770	2068758	.	+	.	ID=id2465;Dbxref=GeneID:1097369;Note=Pfam match to entry PF00456 transketolase%2C Transketolase%2C score 1196.50%2C E-value 0.;gbkey=misc_feature;gene=SCC22.17
NC_003888.3	RefSeq	sequence_feature	2066782	2066844	.	+	.	ID=id2466;Dbxref=GeneID:1097369;Note=PS00801 Transketolase signature 1.;gbkey=misc_feature;gene=SCC22.17
NC_003888.3	RefSeq	sequence_feature	2068183	2068233	.	+	.	ID=id2467;Dbxref=GeneID:1097369;Note=PS00802 Transketolase signature 2.;gbkey=misc_feature;gene=SCC22.17
NC_003888.3	RefSeq	gene	2068835	2069953	.	+	.	ID=gene1936;Dbxref=GeneID:1097370;Name=SCC22.18;gbkey=Gene;gene=SCC22.18;gene_biotype=protein_coding;gene_synonym=SCC22.18,tal2;locus_tag=SCO1936
NC_003888.3	RefSeq	CDS	2068835	2069953	.	+	0	ID=cds1901;Parent=gene1936;Dbxref=Genbank:NP_626201.1,GeneID:1097370;Name=NP_626201.1;Note=catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=SCC22.18;product=transaldolase;protein_id=NP_626201.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2068886	2069659	.	+	.	ID=id2468;Dbxref=GeneID:1097370;Note=Pfam match to entry PF00923 Transaldolase%2C Transaldolase%2C score 269.40%2C E-value 4.8e-77.;gbkey=misc_feature;gene=SCC22.18
NC_003888.3	RefSeq	sequence_feature	2068955	2068981	.	+	.	ID=id2469;Dbxref=GeneID:1097370;Note=PS01054 Transaldolase signature 1.;gbkey=misc_feature;gene=SCC22.18
NC_003888.3	RefSeq	gene	2069957	2071480	.	+	.	ID=gene1937;Dbxref=GeneID:1097371;Name=SCC22.19;gbkey=Gene;gene=SCC22.19;gene_biotype=protein_coding;gene_synonym=SCC22.19,zwf2;locus_tag=SCO1937
NC_003888.3	RefSeq	CDS	2069957	2071480	.	+	0	ID=cds1902;Parent=gene1937;Dbxref=Genbank:NP_626202.1,GeneID:1097371;Name=NP_626202.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;gene=SCC22.19;product=glucose-6-phosphate 1-dehydrogenase;protein_id=NP_626202.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2070029	2071426	.	+	.	ID=id2470;Dbxref=GeneID:1097371;Note=Pfam match to entry PF00479 G6PD%2C Glucose-6-phosphate dehydrogenase%2C score 740.00%2C E-value 4.1e-240.;gbkey=misc_feature;gene=SCC22.19
NC_003888.3	RefSeq	sequence_feature	2070548	2070568	.	+	.	ID=id2471;Dbxref=GeneID:1097371;Note=PS00069 Glucose-6-phosphate dehydrogenase active site.;gbkey=misc_feature;gene=SCC22.19
NC_003888.3	RefSeq	gene	2071477	2072532	.	+	.	ID=gene1938;Dbxref=GeneID:1097372;Name=SCC22.20;gbkey=Gene;gene=SCC22.20;gene_biotype=protein_coding;gene_synonym=SCC22.20;locus_tag=SCO1938
NC_003888.3	RefSeq	CDS	2071477	2072532	.	+	0	ID=cds1903;Parent=gene1938;Dbxref=Genbank:NP_626203.1,GeneID:1097372;Name=NP_626203.1;Note=SCC22.20%2C hypothetical protein%2C len: 351 aa%3B similar to TR:O88016 (EMBL:AL031107) hypothetical protein from Streptomyces coelicolor (311 aa) fasta scores%3B opt: 1363%2C z-score: 1605.9%2C E(): 0%2C (71.3%25 identity in 300 aa overlap) and TR:O06813 (EMBL:Z95844) hypothetical protein from Mycobacterium tuberculosis (303 aa) fasta scores%3B opt: 849%2C z-score: 1002.6%2C E(): 0%2C (46.3%25 identity in 309 aa overlap).;gbkey=CDS;gene=SCC22.20;product=hypothetical protein;protein_id=NP_626203.1;transl_table=11
NC_003888.3	RefSeq	gene	2072529	2073314	.	+	.	ID=gene1939;Dbxref=GeneID:1097373;Name=SCC22.21;gbkey=Gene;gene=SCC22.21;gene_biotype=protein_coding;gene_synonym=SCC22.21;locus_tag=SCO1939
NC_003888.3	RefSeq	CDS	2072529	2073314	.	+	0	ID=cds1904;Parent=gene1939;Dbxref=Genbank:NP_626204.1,GeneID:1097373;Name=NP_626204.1;Note=catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1%2C5-lactone;gbkey=CDS;gene=SCC22.21;product=6-phosphogluconolactonase;protein_id=NP_626204.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2072610	2073263	.	+	.	ID=id2472;Dbxref=GeneID:1097373;Note=Pfam match to entry PF01182 Glucosamine_iso%2C Glucosamine-6-phosphate isomerase%2C score -59.80%2C E-value 0.027.;gbkey=misc_feature;gene=SCC22.21
NC_003888.3	RefSeq	gene	2073377	2074144	.	-	.	ID=gene1940;Dbxref=GeneID:1097374;Name=SCC22.22c;gbkey=Gene;gene=SCC22.22c;gene_biotype=protein_coding;gene_synonym=SCC22.22c;locus_tag=SCO1940
NC_003888.3	RefSeq	CDS	2073377	2074144	.	-	0	ID=cds1905;Parent=gene1940;Dbxref=Genbank:NP_626205.1,GeneID:1097374;Name=NP_626205.1;Note=SCC22.22c%2C possible hypothetical protein%2C len: 255 aa%3B weakly similar to hypothetical proteins e.g. TR:O33272 (EMBL:Z83018) hypothetical protein from Mycobacterium tuberculosis (255 aa) fasta scores%3B opt: 181%2C z-score: 213.5%2C E(): 0.00015%2C (27.0%25 identity in 226 aa overlap. Contains Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence;gbkey=CDS;gene=SCC22.22c;product=hypothetical protein;protein_id=NP_626205.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2074070	2074102	.	-	.	ID=id2473;Dbxref=GeneID:1097374;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCC22.22c
NC_003888.3	RefSeq	gene	2074235	2075203	.	-	.	ID=gene1941;Dbxref=GeneID:1097375;Name=SCC22.23c;gbkey=Gene;gene=SCC22.23c;gene_biotype=protein_coding;gene_synonym=SCC22.23c,SCC54.01c;locus_tag=SCO1941
NC_003888.3	RefSeq	CDS	2074235	2075203	.	-	0	ID=cds1906;Parent=gene1941;Dbxref=Genbank:NP_733552.1,GeneID:1097375;Name=NP_733552.1;Note=SCC54.01c%2C partial CDS%2C possible intergral membrane protein%2C len: >183aa%3B contains possible membrane spanning hydrophobic regions.~SCC22.23c%2C partial CDS%2C possible integral membrane protein%2C len: >178aa%3B forms the C-terminal portion of TR:CAB38131 (EMBL:AL035591) partial CDS%2C possible integral membrane protein on the end of cosmid C54 from Streptomyces coelicolor.;gbkey=CDS;gene=SCC22.23c;product=hypothetical protein;protein_id=NP_733552.1;transl_table=11
NC_003888.3	RefSeq	gene	2075313	2076968	.	-	.	ID=gene1942;Dbxref=GeneID:1097376;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;gene_synonym=pgi2,SCC54.02c;locus_tag=SCO1942
NC_003888.3	RefSeq	CDS	2075313	2076968	.	-	0	ID=cds1907;Parent=gene1942;Dbxref=Genbank:NP_626206.1,GeneID:1097376;Name=NP_626206.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=NP_626206.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2075346	2076809	.	-	.	ID=id2474;Dbxref=GeneID:1097376;Note=Pfam match to entry PF00342 PGI%2C Phosphoglucose isomerase%2C score 903.80%2C E-value 4.9e-268;gbkey=misc_feature;gene=pgi
NC_003888.3	RefSeq	sequence_feature	2075427	2075480	.	-	.	ID=id2475;Dbxref=GeneID:1097376;Note=PS00174 Phosphoglucose isomerase signature 2.;gbkey=misc_feature;gene=pgi
NC_003888.3	RefSeq	gene	2077084	2077419	.	-	.	ID=gene1943;Dbxref=GeneID:1097377;Name=SCC54.03c;gbkey=Gene;gene=SCC54.03c;gene_biotype=protein_coding;gene_synonym=SCC54.03c;locus_tag=SCO1943
NC_003888.3	RefSeq	CDS	2077084	2077419	.	-	0	ID=cds1908;Parent=gene1943;Dbxref=Genbank:NP_626207.1,GeneID:1097377;Name=NP_626207.1;Note=SCC54.03c%2C possible electron transport protein%2C len: 111 aa%3B similar to TR:O53492 (EMBL:AL021899) hypothetical protein from Mycobacterium tuberculosis (111 aa) fasta scores%3B opt: 204%2C z-score: 250.4%2C E(): 1.2e-06%2C (36.9%25 identity in 103 aa overlap). Contains PS00202 Rubredoxin signature.;gbkey=CDS;gene=SCC54.03c;product=electron transport protein;protein_id=NP_626207.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2077237	2077269	.	-	.	ID=id2476;Dbxref=GeneID:1097377;Note=PS00202 Rubredoxin signature.;gbkey=misc_feature;gene=SCC54.03c
NC_003888.3	RefSeq	gene	2077633	2077941	.	-	.	ID=gene1944;Dbxref=GeneID:1097378;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;gene_synonym=SCC54.04c;locus_tag=SCO1944
NC_003888.3	RefSeq	CDS	2077633	2077941	.	-	0	ID=cds1909;Parent=gene1944;Dbxref=Genbank:NP_626208.1,GeneID:1097378;Name=NP_626208.1;Note=SCC54.04c%2C secG%2C integral membrane protein%2C len: 102 aa%3B varying levels of similarity to many with similarity to SecG proteins e.g. TR:E1363411 (EMBL:AJ007732) SecG protein (undefined) from Corynebacterium glutamicum (77 aa) fasta scores%3B opt: 287%2C z-score: 358.8%2C E(): 1.1e-12%2C 53.4%25 identity in 73 aa overlap) and SW:SECG_ECOLI SecG%2C membrane protein involved in protein translocation across the cytoplasmic membrane%2C (110 aa) fasta scores%3B opt: 118%2C z-score: 157.8%2C E(): 0.17%2C (26.2%25 identity in 65 aa overlap). Contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=NP_626208.1;transl_table=11
NC_003888.3	RefSeq	gene	2078015	2078791	.	-	.	ID=gene1945;Dbxref=GeneID:1097379;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;gene_synonym=SCC54.05c;locus_tag=SCO1945
NC_003888.3	RefSeq	CDS	2078015	2078791	.	-	0	ID=cds1910;Parent=gene1945;Dbxref=Genbank:NP_626209.1,GeneID:1097379;Name=NP_626209.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;gene=tpiA;product=triosephosphate isomerase;protein_id=NP_626209.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2078033	2078782	.	-	.	ID=id2477;Dbxref=GeneID:1097379;Note=Pfam match to entry PF00121 TIM%2C Triosephosphate isomerase%2C score 461.50%2C E-value 9.4e-149.;gbkey=misc_feature;gene=tpiA
NC_003888.3	RefSeq	sequence_feature	2078249	2078281	.	-	.	ID=id2478;Dbxref=GeneID:1097379;Note=PS00171 Triosephosphate isomerase active site.;gbkey=misc_feature;gene=tpiA
NC_003888.3	RefSeq	gene	2078797	2080008	.	-	.	ID=gene1946;Dbxref=GeneID:1097380;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;gene_synonym=SCC54.06c;locus_tag=SCO1946
NC_003888.3	RefSeq	CDS	2078797	2080008	.	-	0	ID=cds1911;Parent=gene1946;Dbxref=Genbank:NP_626210.1,GeneID:1097380;Name=NP_626210.1;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;gbkey=CDS;gene=pgk;product=phosphoglycerate kinase;protein_id=NP_626210.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2078800	2080008	.	-	.	ID=id2479;Dbxref=GeneID:1097380;Note=Pfam match to entry PF00162 PGK%2C Phosphoglycerate kinases%2C score 654.10%2C E-value 7.1e-193.;gbkey=misc_feature;gene=pgk
NC_003888.3	RefSeq	sequence_feature	2079931	2079963	.	-	.	ID=id2480;Dbxref=GeneID:1097380;Note=PS00111 Phosphoglycerate kinase signature.;gbkey=misc_feature;gene=pgk
NC_003888.3	RefSeq	gene	2080143	2081153	.	-	.	ID=gene1947;Dbxref=GeneID:1097381;Name=gap1;gbkey=Gene;gene=gap1;gene_biotype=protein_coding;gene_synonym=gap1,SCC54.07c;locus_tag=SCO1947
NC_003888.3	RefSeq	CDS	2080143	2081153	.	-	0	ID=cds1912;Parent=gene1947;Dbxref=Genbank:NP_626211.1,GeneID:1097381;Name=NP_626211.1;Note=SCC54.07c%2C gap1%2C glyceraldehyde-3-phosphate dehydrogenase%2C len: 336aa%3B member of a highly conserved family of proteins eg. SW:G3P_BACST gap%2C glyceraldehyde-3-phosphate dehydrogenase from Bacillus stearothermophilus (334 aa) fasta scores%3B opt: 1477%2C z-score: 1657.1%2C E(): 0%2C (67.9%25 identity in 333 aa overlap). Contains Pfam match to entry PF00044 gpdh%2C glyceraldehyde 3-phosphate dehydrogenases%2C score 725.60%2C E-value 2.2e-214.;gbkey=CDS;gene=gap1;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=NP_626211.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2080146	2081153	.	-	.	ID=id2481;Dbxref=GeneID:1097381;Note=Pfam match to entry PF00044 gpdh%2C glyceraldehyde 3-phosphate dehydrogenases%2C score 725.60%2C E-value 2.2e-214.;gbkey=misc_feature;gene=gap1
NC_003888.3	RefSeq	stem_loop	2081279	2081320	.	+	.	ID=id2482;Note=17bp inverted repeat with potential 7 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2081381	2084380	.	-	.	ID=gene1948;Dbxref=GeneID:1097382;Name=SCC54.08c;gbkey=Gene;gene=SCC54.08c;gene_biotype=protein_coding;gene_synonym=SCC54.08c;locus_tag=SCO1948
NC_003888.3	RefSeq	CDS	2081381	2084380	.	-	0	ID=cds1913;Parent=gene1948;Dbxref=Genbank:NP_626212.1,GeneID:1097382;Name=NP_626212.1;Note=SCC54.08c%2C possible  zinc-binding carboxypeptidase%2C len: 999 aa%3B N-terminal region similar to many carboxypeptidases eg. SW:CBPS_STRGR zinc-carboxypeptidase from Streptomyces griseus (451 aa) fasta scores%3B opt: 565%2C z-score: 581.4%2C E(): 4.4e-25%2C (31.8%25 identity in 456 aa overlap). Contains PS00132 Zinc carboxypeptidases%2C zinc-binding region 1 signature and Pfam match to entry PF00246 Zn_carbOpept%2C Zinc carboxypeptidase%2C score 143.40%2C E-value 4e-39. Also contains probable N-terminal signal sequence.;gbkey=CDS;gene=SCC54.08c;product=zinc-binding carboxypeptidase;protein_id=NP_626212.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2083406	2083987	.	-	.	ID=id2483;Dbxref=GeneID:1097382;Note=Pfam match to entry PF00246 Zn_carbOpept%2C Zinc carboxypeptidase%2C score 143.40%2C E-value 4e-39.;gbkey=misc_feature;gene=SCC54.08c
NC_003888.3	RefSeq	sequence_feature	2083796	2083864	.	-	.	ID=id2484;Dbxref=GeneID:1097382;Note=PS00132 Zinc carboxypeptidases%2C zinc-binding region 1 signature.;gbkey=misc_feature;gene=SCC54.08c
NC_003888.3	RefSeq	gene	2084468	2084563	.	-	.	ID=gene1949;Dbxref=GeneID:1097383;Name=SCC54.09c;gbkey=Gene;gene=SCC54.09c;gene_biotype=protein_coding;gene_synonym=SCC54.09c;locus_tag=SCO1949
NC_003888.3	RefSeq	CDS	2084468	2084563	.	-	0	ID=cds1914;Parent=gene1949;Dbxref=Genbank:NP_626213.1,GeneID:1097383;Name=NP_626213.1;Note=SCC54.09c%2C unknown%2C len: 31aa%3B designated based on Hidden-Markov Model prediction.;gbkey=CDS;gene=SCC54.09c;product=hypothetical protein;protein_id=NP_626213.1;transl_table=11
NC_003888.3	RefSeq	gene	2084575	2085561	.	-	.	ID=gene1950;Dbxref=GeneID:1097384;Name=SCC54.10c;gbkey=Gene;gene=SCC54.10c;gene_biotype=protein_coding;gene_synonym=SCC54.10c;locus_tag=SCO1950
NC_003888.3	RefSeq	CDS	2084575	2085561	.	-	0	ID=cds1915;Parent=gene1950;Dbxref=Genbank:NP_626214.1,GeneID:1097384;Name=NP_626214.1;Note=SCC54.10c%2C hypothetical protein%2C len: 324 aa%3B similar to TR:P71692 (EMBL:Z80108) hypothetical protein from Mycobacterium tuberculosis (325 aa) fasta scores%3B opt: 1495%2C z-score: 1704.7%2C E(): 0%2C (70.6%25 identity in 320 aa overlap).;gbkey=CDS;gene=SCC54.10c;product=hypothetical protein;protein_id=NP_626214.1;transl_table=11
NC_003888.3	RefSeq	gene	2085558	2086649	.	-	.	ID=gene1951;Dbxref=GeneID:1097385;Name=SCC54.11c;gbkey=Gene;gene=SCC54.11c;gene_biotype=protein_coding;gene_synonym=SCC54.11c;locus_tag=SCO1951
NC_003888.3	RefSeq	CDS	2085558	2086649	.	-	0	ID=cds1916;Parent=gene1951;Dbxref=Genbank:NP_626215.1,GeneID:1097385;Name=NP_626215.1;Note=SCC54.11c%2C unknown%2C len: 363aa%3B similar to many hypothetical proteins eg. SW:YR40_MYCTU from Mycobacterium tuberculosis (342 aa) fasta scores%3B opt: 1047%2C z-score: 1131.4%2C E(): 0%2C (54.5%25 identity in 308 aa overlap);gbkey=CDS;gene=SCC54.11c;product=hypothetical protein;protein_id=NP_626215.1;transl_table=11
NC_003888.3	RefSeq	gene	2086657	2087673	.	-	.	ID=gene1952;Dbxref=GeneID:1097386;Name=SCC54.12c;gbkey=Gene;gene=SCC54.12c;gene_biotype=protein_coding;gene_synonym=SCC54.12c;locus_tag=SCO1952
NC_003888.3	RefSeq	CDS	2086657	2087673	.	-	0	ID=cds1917;Parent=gene1952;Dbxref=Genbank:NP_626216.1,GeneID:1097386;Name=NP_626216.1;Note=SCC54.12c%2C unknown%2C len: 338aa%3B similar to many hypothetical proteins e.g. SW:YR39_MYCTU hypothetical protein from Mycobacterium tuberculosis (301 aa) fasta scores%3B opt: 1071%2C z-score: 1215.8%2C E(): 0%2C (55.6%25 identity in 284 aa overlap);gbkey=CDS;gene=SCC54.12c;product=hypothetical protein;protein_id=NP_626216.1;transl_table=11
NC_003888.3	RefSeq	gene	2087670	2089856	.	-	.	ID=gene1953;Dbxref=GeneID:1097387;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;gene_synonym=SCC54.13c;locus_tag=SCO1953
NC_003888.3	RefSeq	CDS	2087670	2089856	.	-	0	ID=cds1918;Parent=gene1953;Dbxref=Genbank:NP_626217.1,GeneID:1097387;Name=NP_626217.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=excinuclease ABC subunit C;protein_id=NP_626217.1;transl_table=11
NC_003888.3	RefSeq	gene	2090209	2091159	.	+	.	ID=gene1954;Dbxref=GeneID:1097388;Name=SCC54.14;gbkey=Gene;gene=SCC54.14;gene_biotype=protein_coding;gene_synonym=SCC54.14;locus_tag=SCO1954
NC_003888.3	RefSeq	CDS	2090209	2091159	.	+	0	ID=cds1919;Parent=gene1954;Dbxref=Genbank:NP_626218.1,GeneID:1097388;Name=NP_626218.1;Note=SCC54.14%2C unknown%2C len: 316aa;gbkey=CDS;gene=SCC54.14;product=hypothetical protein;protein_id=NP_626218.1;transl_table=11
NC_003888.3	RefSeq	gene	2091177	2091602	.	-	.	ID=gene1955;Dbxref=GeneID:1097389;Name=SCC54.15c;gbkey=Gene;gene=SCC54.15c;gene_biotype=protein_coding;gene_synonym=SCC54.15c;locus_tag=SCO1955
NC_003888.3	RefSeq	CDS	2091177	2091602	.	-	0	ID=cds1920;Parent=gene1955;Dbxref=Genbank:NP_626219.1,GeneID:1097389;Name=NP_626219.1;Note=SCC54.15c%2C possible iron sulphur binding membrane lipoprotein%2C len: 141aa%3B similar to many of this type eg. SW:UCRI_CHLLT cytochrome B6-F iron-sulphur subunit%2C petC from chlorobium limicola (180 aa) fasta scores%3B opt: 197%2C z-score: 225.2%2C E(): 3.1e-05%2C (33.3%25 identity in 108 aa overlap). Contains possible N-terminal signal sequence and PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCC54.15c;product=iron sulfur binding protein;protein_id=NP_626219.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2091516	2091548	.	-	.	ID=id2485;Dbxref=GeneID:1097389;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCC54.15c
NC_003888.3	RefSeq	gene	2091825	2092931	.	+	.	ID=gene1956;Dbxref=GeneID:1097390;Name=SCC54.16;gbkey=Gene;gene=SCC54.16;gene_biotype=protein_coding;gene_synonym=SCC54.16;locus_tag=SCO1956
NC_003888.3	RefSeq	CDS	2091825	2092931	.	+	0	ID=cds1921;Parent=gene1956;Dbxref=Genbank:NP_626220.1,GeneID:1097390;Name=NP_626220.1;Note=SCC54.16%2C probable transcriptional regulator (lacI family)%2C len: 368 aa%3B similar to many lacI family transcriptional regulators e.g. SW:RBSR_ECOLI RbsR%2C ribose operon repressor from Escherichia coli (329 aa) fasta scores%3B opt: 611%2C z-score: 696.2%2C E(): 1.8e-31%2C (34.2%25 identity in 336 aa overlap). Contains PS00356 Bacterial regulatory proteins%2C lacI family signature and Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family%2C score 102.80%2C E-value 6.7e-27. Also contains Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 36.60%2C E-value 7.4e-09 which corresponds to a probable helix-turn-helix at 3-24aa (+5.62 SD).;gbkey=CDS;gene=SCC54.16;product=LacI family transcription regulator;protein_id=NP_626220.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2091825	2091905	.	+	.	ID=id2486;Dbxref=GeneID:1097390;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 36.60%2C E-value 7.4e-09.;gbkey=misc_feature;gene=SCC54.16
NC_003888.3	RefSeq	sequence_feature	2091834	2091890	.	+	.	ID=id2487;Dbxref=GeneID:1097390;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=SCC54.16
NC_003888.3	RefSeq	sequence_feature	2091996	2092739	.	+	.	ID=id2488;Dbxref=GeneID:1097390;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 102.80%2C E-value 6.7e-27.;gbkey=misc_feature;gene=SCC54.16
NC_003888.3	RefSeq	gene	2092928	2093836	.	+	.	ID=gene1957;Dbxref=GeneID:1097391;Name=SCC54.17;gbkey=Gene;gene=SCC54.17;gene_biotype=protein_coding;gene_synonym=SCC54.17;locus_tag=SCO1957
NC_003888.3	RefSeq	CDS	2092928	2093836	.	+	0	ID=cds1922;Parent=gene1957;Dbxref=Genbank:NP_626221.1,GeneID:1097391;Name=NP_626221.1;Note=SCC54.17%2C probable fructokinase%2C len: 302 aa%3B similar to many e.g. SW:SCRK_RHILT Frk%2C fructokinase from Rhizobium leguminosarum biovar trifolii (326 aa) fasta scores%3B opt: 617%2C z-score: 682.4%2C E(): 1.1e-30%2C (41.0%25 identity in 288 aa overlap). Contains PS00584 pfkB family of carbohydrate kinases signature 2 and Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 132.90%2C E-value 9.6e-41;gbkey=CDS;gene=SCC54.17;product=fructokinase;protein_id=NP_626221.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2093009	2093671	.	+	.	ID=id2489;Dbxref=GeneID:1097391;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 132.90%2C E-value 9.6e-41.;gbkey=misc_feature;gene=SCC54.17
NC_003888.3	RefSeq	sequence_feature	2093636	2093677	.	+	.	ID=id2490;Dbxref=GeneID:1097391;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;gbkey=misc_feature;gene=SCC54.17
NC_003888.3	RefSeq	repeat_region	2093869	2093976	.	+	.	ID=id2491;Note=probably non-coding repeat%2C 18 x CTTCGG.;gbkey=repeat_region
NC_003888.3	RefSeq	stem_loop	2094225	2094268	.	-	.	ID=id2492;Note=19bp inverted repeat with 6 base loop downstream of SCC54.18c%2C uvrA.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2094274	2097318	.	-	.	ID=gene1958;Dbxref=GeneID:1097392;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;gene_synonym=SCC54.18c;locus_tag=SCO1958
NC_003888.3	RefSeq	CDS	2094274	2097318	.	-	0	ID=cds1923;Parent=gene1958;Dbxref=Genbank:NP_626222.1,GeneID:1097392;Name=NP_626222.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate;gbkey=CDS;gene=uvrA;product=excinuclease ABC subunit A;protein_id=NP_626222.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2094592	2095407	.	-	.	ID=id2493;Dbxref=GeneID:1097392;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 119.60%2C E-value 5.8e-32.;gbkey=misc_feature;gene=uvrA
NC_003888.3	RefSeq	sequence_feature	2094775	2094819	.	-	.	ID=id2494;Dbxref=GeneID:1097392;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=uvrA
NC_003888.3	RefSeq	sequence_feature	2095363	2095386	.	-	.	ID=id2495;Dbxref=GeneID:1097392;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uvrA
NC_003888.3	RefSeq	sequence_feature	2095615	2097246	.	-	.	ID=id2496;Dbxref=GeneID:1097392;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 19.90%2C E-value 6.7e-07.;gbkey=misc_feature;gene=uvrA
NC_003888.3	RefSeq	sequence_feature	2095801	2095845	.	-	.	ID=id2497;Dbxref=GeneID:1097392;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=uvrA
NC_003888.3	RefSeq	sequence_feature	2096023	2096046	.	-	.	ID=id2498;Dbxref=GeneID:1097392;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uvrA
NC_003888.3	RefSeq	sequence_feature	2097202	2097225	.	-	.	ID=id2499;Dbxref=GeneID:1097392;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uvrA
NC_003888.3	RefSeq	gene	2097542	2098228	.	+	.	ID=gene1959;Dbxref=GeneID:1097393;Name=SCC54.19;gbkey=Gene;gene=SCC54.19;gene_biotype=protein_coding;gene_synonym=SCC54.19;locus_tag=SCO1959
NC_003888.3	RefSeq	CDS	2097542	2098228	.	+	0	ID=cds1924;Parent=gene1959;Dbxref=Genbank:NP_626223.1,GeneID:1097393;Name=NP_626223.1;Note=in Corynebacterium glutamicum this enzyme catalyzes the conversion of maleylpyruvate into fumarylpyruvate in a glutathione-independent gentisate pathway%3B dependent on mycothiol;gbkey=CDS;gene=SCC54.19;product=mycothiol-dependent maleylpyruvate isomerase;protein_id=NP_626223.1;transl_table=11
NC_003888.3	RefSeq	gene	2098289	2098945	.	+	.	ID=gene1960;Dbxref=GeneID:1097394;Name=SCC54.20;gbkey=Gene;gene=SCC54.20;gene_biotype=protein_coding;gene_synonym=SCC54.20;locus_tag=SCO1960
NC_003888.3	RefSeq	CDS	2098289	2098945	.	+	0	ID=cds1925;Parent=gene1960;Dbxref=Genbank:NP_626224.1,GeneID:1097394;Name=NP_626224.1;Note=SCC54.20%2C possible hydrolase%2C len: 218aa%3B similar to many hypothetical proteins eg. TR:O06154 (EMBL:Z95554) hypothetical protein from Mycobacterium tuberculosis fasta scores%3B opt: 732. z-score: 872.3. E(): 0%2C (52.3%25 identity in 220 aa overlap). Also has a region of similarity to SW:GLO2_RHOBL probable hydrocylglutathione hydrolase from Rhodopseudomonas blastica (255 aa) fasta scores%3B opt: 275%2C z-score: 333.2%2C E(): 3e-11%2C (33.7%25 identity in 193 aa overlap).;gbkey=CDS;gene=SCC54.20;product=hydrolase;protein_id=NP_626224.1;transl_table=11
NC_003888.3	RefSeq	gene	2099149	2099622	.	-	.	ID=gene1961;Dbxref=GeneID:1097395;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;gene_synonym=aroQ,SCC54.21c;locus_tag=SCO1961
NC_003888.3	RefSeq	CDS	2099149	2099622	.	-	0	ID=cds1926;Parent=gene1961;Dbxref=Genbank:NP_626225.1,GeneID:1097395;Name=NP_626225.1;Note=catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis;gbkey=CDS;gene=aroQ;product=3-dehydroquinate dehydratase;protein_id=NP_626225.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2099167	2099601	.	-	.	ID=id2500;Dbxref=GeneID:1097395;Note=Pfam match to entry PF01220 DHquinase_II%2C Dehydroquinase class II %2C score 234.80%2C E-value 1.2e-66.;gbkey=misc_feature;gene=aroQ
NC_003888.3	RefSeq	sequence_feature	2099533	2099586	.	-	.	ID=id2501;Dbxref=GeneID:1097395;Note=PS01029 Dehydroquinase class II signature.;gbkey=misc_feature;gene=aroQ
NC_003888.3	RefSeq	gene	2099713	2100813	.	-	.	ID=gene1962;Dbxref=GeneID:1097396;Name=SCC54.22c;gbkey=Gene;gene=SCC54.22c;gene_biotype=protein_coding;gene_synonym=SCC54.22c;locus_tag=SCO1962
NC_003888.3	RefSeq	CDS	2099713	2100813	.	-	0	ID=cds1927;Parent=gene1962;Dbxref=Genbank:NP_626226.1,GeneID:1097396;Name=NP_626226.1;Note=SCC54.22c%2C probable ionic transporter%2C len: 366 aa%3B similar to many egs. TR:O53910 (EMBL:AL022001) ionic transporter from Mycobacterium tuberculosis (360 aa) fasta scores%3B opt: 1466%2C z-score: 1650.6%2C E(): 0%2C (69.4%25 identity in 356 aa overlap) and SW:CHAA_ECOLI ChaA%2C calcium/proton antiporter from Escherichia coli (366 aa) fasta scores%3B opt: 668%2C z-score: 756.2%2C E(): 0%2C (34.7%25 identity in 352 aa overlap). Contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCC54.22c;product=ionic transporter;protein_id=NP_626226.1;transl_table=11
NC_003888.3	RefSeq	gene	2100946	2101947	.	-	.	ID=gene1963;Dbxref=GeneID:1097397;Name=SCC54.23c;gbkey=Gene;gene=SCC54.23c;gene_biotype=protein_coding;gene_synonym=SCC54.23c;locus_tag=SCO1963
NC_003888.3	RefSeq	CDS	2100946	2101947	.	-	0	ID=cds1928;Parent=gene1963;Dbxref=Genbank:NP_626227.1,GeneID:1097397;Name=NP_626227.1;Note=SCC54.23c%2C probable integral membrane export protein%2C len: 333aa%3B similar to many egs. TR:O33228 (EMBL:Z98209) hypothetical protein from Mycobacterium tuberculosis (397 aa) fasta scores%3B opt: 879%2C z-score: 1040.7%2C E(): 0%2C (46.6%25 identity in 326 aa overlap) and SW:TERC_ALCSP plasmid determinant for resistance to tellurium anions from plasmid pMJ606 of Alcaligenes sp. (346 aa) fasta scores%3B opt: 249%2C z-score: 299.8%2C E(): 2.2e-09%2C (31.8%25 identity in 333 aa overlap). Contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCC54.23c;product=integral membrane export protein;protein_id=NP_626227.1;transl_table=11
NC_003888.3	RefSeq	gene	2102200	2104215	.	-	.	ID=gene1964;Dbxref=GeneID:1097398;Name=SCC54.24c;gbkey=Gene;gene=SCC54.24c;gene_biotype=protein_coding;gene_synonym=SCC54.24c;locus_tag=SCO1964
NC_003888.3	RefSeq	CDS	2102200	2104215	.	-	0	ID=cds1929;Parent=gene1964;Dbxref=Genbank:NP_626228.1,GeneID:1097398;Name=NP_626228.1;Note=SCC54.24c%2C possible export associated protein%2C len: 671aa%3B prediction based on the predicted function of surrounding genes and the short region (67-162aa) of similarity to TR:Q52357 (EMBL:L38824) terD%2C associated with phage inhibition%2C colicin resistance and tellurite resistance from Serratia marcescens IncHI2 plasmid R478 blast scores%3B E%3D2.1e-12%2C Identities %3D 40/98 (40%25)%2C Positives %3D 55/98 (56%25) which may represent an active site.;gbkey=CDS;gene=SCC54.24c;product=export associated protein;protein_id=NP_626228.1;transl_table=11
NC_003888.3	RefSeq	gene	2104340	2104918	.	-	.	ID=gene1965;Dbxref=GeneID:1097399;Name=SCC54.25c;gbkey=Gene;gene=SCC54.25c;gene_biotype=protein_coding;gene_synonym=SCC54.25c;locus_tag=SCO1965
NC_003888.3	RefSeq	CDS	2104340	2104918	.	-	0	ID=cds1930;Parent=gene1965;Dbxref=Genbank:NP_626229.1,GeneID:1097399;Name=NP_626229.1;Note=SCC54.25c%2C possible export associated protein%2C len: 192aa%3B similar to many associated with plasmid borne resistance export systems egs. TR:Q52353 (EMBL:L38824) from the IncHI2 plasmid R478 of Serratia marcescens (193 aa) fasta scores%3B opt: 497%2C z-score: 593.2%2C E(): 9.8e-26%2C (42.2%25 identity in 192 aa overlap) and SW:TERD_ALCSP terD%2C tellurium resistance protein from the pMER610 plasmid of Alcaligenes sp. (192 aa) fasta scores%3B opt: 357%2C z-score: 429.6%2C E(): 1.3e-16%2C (37.2%25 identity in 188 aa overlap).;gbkey=CDS;gene=SCC54.25c;product=export associated protein;protein_id=NP_626229.1;transl_table=11
NC_003888.3	RefSeq	gene	2105061	2107199	.	-	.	ID=gene1966;Dbxref=GeneID:1097400;Name=SC3C9.01c;gbkey=Gene;gene=SC3C9.01c;gene_biotype=protein_coding;gene_synonym=SC3C9.01c,SCC54.26c,uvrB;locus_tag=SCO1966
NC_003888.3	RefSeq	CDS	2105061	2107199	.	-	0	ID=cds1931;Parent=gene1966;Dbxref=Genbank:NP_733553.1,GeneID:1097400;Name=NP_733553.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;gene=SC3C9.01c;product=excinuclease ABC subunit B;protein_id=NP_733553.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2105541	2105801	.	-	.	ID=id2502;Dbxref=GeneID:1097400;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 75.00%2C E-value 1.5e-18;gbkey=misc_feature;gene=SC3C9.01c
NC_003888.3	RefSeq	sequence_feature	2106753	2107166	.	-	.	ID=id2503;Dbxref=GeneID:1097400;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 27.00%2C E-value 1.2e-07;gbkey=misc_feature;gene=SC3C9.01c
NC_003888.3	RefSeq	sequence_feature	2107035	2107058	.	-	.	ID=id2504;Dbxref=GeneID:1097400;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3C9.01c
NC_003888.3	RefSeq	gene	2107239	2108117	.	-	.	ID=gene1967;Dbxref=GeneID:1097401;Name=SC3C9.02c;gbkey=Gene;gene=SC3C9.02c;gene_biotype=protein_coding;gene_synonym=SC3C9.02c;locus_tag=SCO1967
NC_003888.3	RefSeq	CDS	2107239	2108117	.	-	0	ID=cds1932;Parent=gene1967;Dbxref=Genbank:NP_626230.1,GeneID:1097401;Name=NP_626230.1;Note=SC3C9.02c%2C possible integral membrane protein%2C len: 292 aa%3B similar to TR:Q9KZI4 (EMBL:AL353863) Streptomyces coelicolor  integral membrane protein SCG8A.15c%2C 244 aa%3B fasta scores: opt: 703 Z-score: 726.3 bits: 142.1 E(): 7.6e-33%3B 48.430%25 identity in 223 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3C9.02c;product=hypothetical protein;protein_id=NP_626230.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2108399	2108403	.	+	.	ID=id2505;gbkey=RBS
NC_003888.3	RefSeq	gene	2108409	2109278	.	+	.	ID=gene1968;Dbxref=GeneID:1097402;Name=SC3C9.03;gbkey=Gene;gene=SC3C9.03;gene_biotype=protein_coding;gene_synonym=SC3C9.03;locus_tag=SCO1968
NC_003888.3	RefSeq	CDS	2108409	2109278	.	+	0	ID=cds1933;Parent=gene1968;Dbxref=Genbank:NP_626231.1,GeneID:1097402;Name=NP_626231.1;Note=SC3C9.03%2C probable  hydrolase%2C len: 289 aa%3B similar to SW:GLPQ_BACSU (EMBL:Z26522) Bacillus subtilis glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) GlpQ%2C 293 aa%3B fasta scores: opt: 495 Z-score: 576.9 bits: 114.7 E(): 1.6e-24%3B 34.114%25 identity in 299 aa overlap. Contains possible cleavable N-terminal region signal peptide sequence;gbkey=CDS;gene=SC3C9.03;product=hydrolase;protein_id=NP_626231.1;transl_table=11
NC_003888.3	RefSeq	gene	2109316	2109870	.	+	.	ID=gene1969;Dbxref=GeneID:1097403;Name=SC3C9.04;gbkey=Gene;gene=SC3C9.04;gene_biotype=protein_coding;gene_synonym=SC3C9.04;locus_tag=SCO1969
NC_003888.3	RefSeq	CDS	2109316	2109870	.	+	0	ID=cds1934;Parent=gene1969;Dbxref=Genbank:NP_626232.1,GeneID:1097403;Name=NP_626232.1;Note=SC3C9.04%2C possible DNA-methyltransferase%2C len: 184 aa%3B similar to SW:OGT_MYCPA (EMBL:AJ011838) Mycobacterium paratuberculosis methylated-DNA protein-cysteine methyltransferase (EC 2.1.1.63) Ogt%2C 165 aa%3B fasta scores: opt: 355 Z-score: 399.1 bits: 80.3 E(): 1.3e-14%3B 40.964%25 identity in 166 aa overlap. Contains Pfam matches to entries PF02870 Methyltransf_1N%2C 6-O-methylguanine DNA methyltransferase%2C ribonuclease-like domain and PF01035 Methyltransf_1%2C 6-O-methylguanine DNA methyltransferase%2C DNA binding domain and match to Prosite entry PS00374 Methylated-DNA--protein-cysteine methyltransferase active site;gbkey=CDS;gene=SC3C9.04;product=DNA-methyltransferase;protein_id=NP_626232.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2109343	2109591	.	+	.	ID=id2506;Dbxref=GeneID:1097403;Note=Pfam match to entry PF02870 Methyltransf_1N%2C 6-O-methylguanine DNA methyltransferase%2C ribonuclease-like domain%2C score 27.70%2C E-value 0.00028;gbkey=misc_feature;gene=SC3C9.04
NC_003888.3	RefSeq	sequence_feature	2109598	2109867	.	+	.	ID=id2507;Dbxref=GeneID:1097403;Note=Pfam match to entry PF01035 Methyltransf_1%2C 6-O-methylguanine DNA methyltransferase%2C DNA binding domain%2C score 121.20%2C E-value 1.9e-32;gbkey=misc_feature;gene=SC3C9.04
NC_003888.3	RefSeq	sequence_feature	2109754	2109774	.	+	.	ID=id2508;Dbxref=GeneID:1097403;Note=PS00374 Methylated-DNA--protein-cysteine methyltransferase active site;gbkey=misc_feature;gene=SC3C9.04
NC_003888.3	RefSeq	gene	2109895	2110338	.	-	.	ID=gene1970;Dbxref=GeneID:1097404;Name=SC3C9.05c;gbkey=Gene;gene=SC3C9.05c;gene_biotype=protein_coding;gene_synonym=SC3C9.05c;locus_tag=SCO1970
NC_003888.3	RefSeq	CDS	2109895	2110338	.	-	0	ID=cds1935;Parent=gene1970;Dbxref=Genbank:NP_626233.1,GeneID:1097404;Name=NP_626233.1;Note=SC3C9.05c%2C possible dioxygenase%2C len: 147 aa%3B similar to TR:Q9I0T8 (EMBL:AE004682) Pseudomonas aeruginosa probable ring-cleaving dioxygenase PA2546%2C 143 aa%3B fasta scores: opt: 178 Z-score: 231.1 bits: 48.7 E(): 2.9e-05%3B 33.333%25 identity in 135 aa overlap. Contains Pfam match to entry PF00903 Glyoxalase%2C Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;gbkey=CDS;gene=SC3C9.05c;product=dioxygenase;protein_id=NP_626233.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2109913	2110284	.	-	.	ID=id2509;Dbxref=GeneID:1097404;Note=Pfam match to entry PF00903 Glyoxalase%2C Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily%2C score 46.90%2C E-value 2.9e-12;gbkey=misc_feature;gene=SC3C9.05c
NC_003888.3	RefSeq	ribosome_entry_site	2110448	2110454	.	+	.	ID=id2510;gbkey=RBS
NC_003888.3	RefSeq	gene	2110465	2111370	.	+	.	ID=gene1971;Dbxref=GeneID:1097405;Name=SC3C9.06;gbkey=Gene;gene=SC3C9.06;gene_biotype=protein_coding;gene_synonym=SC3C9.06;locus_tag=SCO1971
NC_003888.3	RefSeq	CDS	2110465	2111370	.	+	0	ID=cds1936;Parent=gene1971;Dbxref=Genbank:NP_626234.1,GeneID:1097405;Name=NP_626234.1;Note=SC3C9.06%2C conserved hypothetical protein%2C len: 301 aa%3B similar to TR:BAB36480 (EMBL:AP002560) Escherichia coli O157:H7 hypothetical 32.9 kDa protein ECS3057%2C 312 aa%3B fasta scores: opt: 837 Z-score: 923.0 bits: 178.9 E(): 8.4e-44%3B 48.495%25 identity in 299 aa overlap;gbkey=CDS;gene=SC3C9.06;product=hypothetical protein;protein_id=NP_626234.1;transl_table=11
NC_003888.3	RefSeq	gene	2111367	2112302	.	+	.	ID=gene1972;Dbxref=GeneID:1097406;Name=SC3C9.07;gbkey=Gene;gene=SC3C9.07;gene_biotype=protein_coding;gene_synonym=SC3C9.07;locus_tag=SCO1972
NC_003888.3	RefSeq	CDS	2111367	2112302	.	+	0	ID=cds1937;Parent=gene1972;Dbxref=Genbank:NP_626235.1,GeneID:1097406;Name=NP_626235.1;Note=SC3C9.07%2C probable sugar kinase%2C len: 311 aa%3B similar to SW:SCRK_KLEPN (EMBL:X61004) Klebsiella pneumoniae fructokinase (EC 2.7.1.4) ScrK%2C 307 aa%3B fasta scores: opt: 294 Z-score: 321.0 bits: 67.5 E(): 2.9e-10%3B 31.541%25 identity in 279 aa overlap. Contains Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase and match to Prosite entry PS00584 pfkB family of carbohydrate kinases signature 2;gbkey=CDS;gene=SC3C9.07;product=sugar kinase;protein_id=NP_626235.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2111382	2112278	.	+	.	ID=id2511;Dbxref=GeneID:1097406;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 166.90%2C E-value 3.4e-46;gbkey=misc_feature;gene=SC3C9.07
NC_003888.3	RefSeq	sequence_feature	2112132	2112173	.	+	.	ID=id2512;Dbxref=GeneID:1097406;Note=PS00584 pfkB family of carbohydrate kinases signature 2;gbkey=misc_feature;gene=SC3C9.07
NC_003888.3	RefSeq	gene	2112316	2113110	.	-	.	ID=gene1973;Dbxref=GeneID:1097407;Name=SC3C9.08c;gbkey=Gene;gene=SC3C9.08c;gene_biotype=protein_coding;gene_synonym=SC3C9.08c;locus_tag=SCO1973
NC_003888.3	RefSeq	CDS	2112316	2113110	.	-	0	ID=cds1938;Parent=gene1973;Dbxref=Genbank:NP_626236.1,GeneID:1097407;Name=NP_626236.1;Note=SC3C9.08c%2Cconserved hypothetical protein%2C len: 264 aa%3B low similarity to SW:YT37_STRFR (EMBL:M29297) Streptomyces fradiae hypothetical 37.1 kDa protein in transposon TN4556%2C 345 aa%3B fasta scores: opt: 224 Z-score: 256.6 bits: 55.5 E(): 1.1e-06%3B 29.259%25 identity in 270 aa overlap;gbkey=CDS;gene=SC3C9.08c;product=hypothetical protein;protein_id=NP_626236.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2113346	2113349	.	+	.	ID=id2513;gbkey=RBS
NC_003888.3	RefSeq	gene	2113356	2114481	.	+	.	ID=gene1974;Dbxref=GeneID:1097408;Name=SC3C9.09;gbkey=Gene;gene=SC3C9.09;gene_biotype=pseudogene;gene_synonym=SC3C9.09;locus_tag=SCO1974;pseudo=true
NC_003888.3	RefSeq	sequence_feature	2113356	2114481	.	+	.	ID=id2514;Dbxref=PSEUDO:CAD55288.1,GeneID:1097408;Note=pseudogene%2C metal-transport protein%3BSC3C9.09%2C pseudogene%2C possible metal-transport protein%2C len: 374 aa%3B similar to TR:Q9FBK1 (EMBL:AL390975) Streptomyces coelicolor metal-transport protein SCP8.20c%2C 371 aa%3B fasta scores: opt: 1440 Z-score: 1610.3 bits: 306.6 E(): 4.4e-82%3B 60.929%25 identity in 366 aa overlap. Contains Pfam match to entry PF01544 CorA%2C CorA-like Mg2+ transporter and possible hydrophobic membrane spanning regions in C-terminal domain;gbkey=misc_feature;gene=SC3C9.09
NC_003888.3	RefSeq	sequence_feature	2113572	2114375	.	+	.	ID=id2515;Dbxref=GeneID:1097408;Note=Pfam match to entry PF01544 CorA%2C CorA-like Mg2+ transporter%2C score 197.90%2C E-value 1.6e-55;gbkey=misc_feature;gene=SC3C9.09
NC_003888.3	RefSeq	gene	2114500	2115132	.	-	.	ID=gene1975;Dbxref=GeneID:1097409;Name=SC3C9.10c;gbkey=Gene;gene=SC3C9.10c;gene_biotype=protein_coding;gene_synonym=SC3C9.10c;locus_tag=SCO1975
NC_003888.3	RefSeq	CDS	2114500	2115132	.	-	0	ID=cds1939;Parent=gene1975;Dbxref=Genbank:NP_626237.1,GeneID:1097409;Name=NP_626237.1;Note=SC3C9.10c%2C unknown%2C len: 210 aa;gbkey=CDS;gene=SC3C9.10c;product=hypothetical protein;protein_id=NP_626237.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2115333	2115336	.	+	.	ID=id2516;gbkey=RBS
NC_003888.3	RefSeq	gene	2115347	2115826	.	+	.	ID=gene1976;Dbxref=GeneID:1097410;Name=SC3C9.11;gbkey=Gene;gene=SC3C9.11;gene_biotype=protein_coding;gene_synonym=SC3C9.11;locus_tag=SCO1976
NC_003888.3	RefSeq	CDS	2115347	2115826	.	+	0	ID=cds1940;Parent=gene1976;Dbxref=Genbank:NP_626238.1,GeneID:1097410;Name=NP_626238.1;Note=SC3C9.11%2C possible integral membrane protein%2C len: 159 aa%3B similar to TR:BAB50721 (EMBL:AP003003) Rhizobium loti MLR3943 protein%2C 158 aa%3B fasta scores: opt: 409 Z-score: 476.8 bits: 94.4 E(): 6e-19%3B 40.667%25 identity in 150 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3C9.11;product=hypothetical protein;protein_id=NP_626238.1;transl_table=11
NC_003888.3	RefSeq	gene	2115989	2117479	.	+	.	ID=gene1977;Dbxref=GeneID:1097411;Name=SC3C9.12;gbkey=Gene;gene=SC3C9.12;gene_biotype=protein_coding;gene_synonym=SC3C9.12;locus_tag=SCO1977
NC_003888.3	RefSeq	CDS	2115989	2117479	.	+	0	ID=cds1941;Parent=gene1977;Dbxref=Genbank:NP_626239.1,GeneID:1097411;Name=NP_626239.1;Note=function undetermined%3B similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain;gbkey=CDS;gene=SC3C9.12;product=oxidoreductase;protein_id=NP_626239.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2116424	2117368	.	+	.	ID=id2517;Dbxref=GeneID:1097411;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 101.70%2C E-value 1.4e-26;gbkey=misc_feature;gene=SC3C9.12
NC_003888.3	RefSeq	gene	2117630	2117905	.	-	.	ID=gene1978;Dbxref=GeneID:1097412;Name=SC3C9.13c;gbkey=Gene;gene=SC3C9.13c;gene_biotype=protein_coding;gene_synonym=SC3C9.13c;locus_tag=SCO1978
NC_003888.3	RefSeq	CDS	2117630	2117905	.	-	0	ID=cds1942;Parent=gene1978;Dbxref=Genbank:NP_626240.1,GeneID:1097412;Name=NP_626240.1;Note=SC3C9.13c%2C possible AbaA-like protein%2C len: 91 aa%3B similar to TR:Q9F3E1 (EMBL:AL450289) Streptomyces coelicolor  AbaA-like protein SC2H2.14%2C 89 aa%3B fasta scores: opt: 371 Z-score: 479.1 bits: 93.2 E(): 4.5e-19%3B 69.863%25 identity in 73 aa overlap and to TR:Q53896 (EMBL:X60316) Streptomyces coelicolor AbaA gene (regulator) SCF42.13%2C 75 aa%3B fasta scores: opt: 220 Z-score: 293.4 bits: 58.6 E(): 9.9e-09%3B 50.000%25 identity in 74 aa overlap;gbkey=CDS;gene=SC3C9.13c;product=AbaA-like protein;protein_id=NP_626240.1;transl_table=11
NC_003888.3	RefSeq	gene	2117906	2118766	.	-	.	ID=gene1979;Dbxref=GeneID:1097413;Name=SC3C9.14c;gbkey=Gene;gene=SC3C9.14c;gene_biotype=protein_coding;gene_synonym=SC3C9.14c;locus_tag=SCO1979
NC_003888.3	RefSeq	CDS	2117906	2118766	.	-	0	ID=cds1943;Parent=gene1979;Dbxref=Genbank:NP_626241.1,GeneID:1097413;Name=NP_626241.1;Note=SC3C9.14c%2C probable DNA-binding protein%2C len: 286 aa%3B similar to many Streptomyces DNA-binding proteins e.g. TR:Q9F3E2 (EMBL:AL450289) Streptomyces coelicolor DNA-binding proteins SC2H2.13%2C 290 aa%3B fasta scores: opt: 1019 Z-score: 1178.0 bits: 225.9 E(): 5.2e-58%3B 55.000%25 identity in 280 aa overlap and TR:O86719 (EMBL:AL031515) SC5C7.22c%2C 287 aa%3B fasta scores: opt: 1360 Z-score: 1390.2 bits: 265.1 E(): 1e-71%3B 69.338%25 identity in 287 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and a possible helix-turn-helix motif at residues 28..49 (+4.23 SD);gbkey=CDS;gene=SC3C9.14c;product=DNA-binding protein;protein_id=NP_626241.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2117912	2117917	.	-	.	ID=id2518;Dbxref=GeneID:1097413;gbkey=RBS;gene=SC3C9.14c
NC_003888.3	RefSeq	sequence_feature	2118548	2118712	.	-	.	ID=id2519;Dbxref=GeneID:1097413;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 33.00%2C E-value 7e-06;gbkey=misc_feature;gene=SC3C9.14c
NC_003888.3	RefSeq	ribosome_entry_site	2118771	2118779	.	-	.	ID=id2520;gbkey=RBS
NC_003888.3	RefSeq	gene	2119050	2119763	.	+	.	ID=gene1980;Dbxref=GeneID:1097414;Name=SC3C9.15;gbkey=Gene;gene=SC3C9.15;gene_biotype=protein_coding;gene_synonym=SC3C9.15;locus_tag=SCO1980
NC_003888.3	RefSeq	CDS	2119050	2119763	.	+	0	ID=cds1944;Parent=gene1980;Dbxref=Genbank:NP_626242.1,GeneID:1097414;Name=NP_626242.1;Note=SC3C9.15%2C hypothetical protein%2C len: 237 aa%3B similar to TR:O86675 (EMBL:AL031371) Streptomyces coelicolor hypothetical 21.4 kDa protein SC4G2.02c%2C 196 aa%3B fasta scores: opt: 248 Z-score: 277.4 bits: 58.4 E(): 7.7e-08%3B 34.239%25 identity in 184 aa overlap. Contains Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase and a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC3C9.15;product=hypothetical protein;protein_id=NP_626242.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2119077	2119079	.	+	.	ID=id2521;Dbxref=GeneID:1097414;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SC3C9.15
NC_003888.3	RefSeq	sequence_feature	2119278	2119391	.	+	.	ID=id2522;Dbxref=GeneID:1097414;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase%2C score 20.40%2C E-value 0.0003;gbkey=misc_feature;gene=SC3C9.15
NC_003888.3	RefSeq	gene	2119760	2120194	.	+	.	ID=gene1981;Dbxref=GeneID:1097415;Name=SC3C9.16;gbkey=Gene;gene=SC3C9.16;gene_biotype=protein_coding;gene_synonym=SC3C9.16;locus_tag=SCO1981
NC_003888.3	RefSeq	CDS	2119760	2120194	.	+	0	ID=cds1945;Parent=gene1981;Dbxref=Genbank:NP_626243.1,GeneID:1097415;Name=NP_626243.1;Note=SC3C9.16%2C hypothetical protein%2C len: 144 aa%3B similar to C-terminal part of TR:Q9F397 (EMBL:AL450165) Streptomyces coelicolor hypothetical 21.9 kDa protein SC5F1.32c%2C 205 aa%3B fasta scores: opt: 395 Z-score: 465.9 bits: 92.6 E(): 2.4e-18%3B 43.165%25 identity in 139 aa overlap;gbkey=CDS;gene=SC3C9.16;product=hypothetical protein;protein_id=NP_626243.1;transl_table=11
NC_003888.3	RefSeq	gene	2120213	2120395	.	-	.	ID=gene1982;Dbxref=GeneID:1097416;Name=SC3C9.17c;gbkey=Gene;gene=SC3C9.17c;gene_biotype=protein_coding;gene_synonym=SC3C9.17c;locus_tag=SCO1982
NC_003888.3	RefSeq	CDS	2120213	2120395	.	-	0	ID=cds1946;Parent=gene1982;Dbxref=Genbank:NP_626244.1,GeneID:1097416;Name=NP_626244.1;Note=SC3C9.17c%2C hypothetical protein%2C len: 60 aa%3B similar to SCP1 borne TR:Q9AD30 (EMBL:AL590463) Streptomyces coelicolor hypothetical 6.3 kDa protein SCP1.120%2C 59 aa%3B fasta scores: opt: 224 Z-score: 325.4 bits: 63.6 E(): 1.6e-10%3B 66.667%25 identity in 45 aa overlap;gbkey=CDS;gene=SC3C9.17c;product=hypothetical protein;protein_id=NP_626244.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2120400	2120406	.	-	.	ID=id2523;gbkey=RBS
NC_003888.3	RefSeq	gene	2120551	2121240	.	-	.	ID=gene1983;Dbxref=GeneID:1097417;Name=SC3C9.18c;gbkey=Gene;gene=SC3C9.18c;gene_biotype=protein_coding;gene_synonym=SC3C9.18c;locus_tag=SCO1983
NC_003888.3	RefSeq	CDS	2120551	2121240	.	-	0	ID=cds1947;Parent=gene1983;Dbxref=Genbank:NP_626245.1,GeneID:1097417;Name=NP_626245.1;Note=SC3C9.18c%2C conserved hypothetical protein%2C len: 229 aa%3B similar to TR:BAB49166 (EMBL:AP002998) Rhizobium loti MLR1911 protein%2C 249 aa%3B fasta scores: opt: 689 Z-score: 839.8 bits: 162.8 E(): 3.6e-39%3B 50.000%25 identity in 234 aa overlap. Contains a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC3C9.18c;product=hypothetical protein;protein_id=NP_626245.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2121184	2121186	.	-	.	ID=id2524;Dbxref=GeneID:1097417;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SC3C9.18c
NC_003888.3	RefSeq	ribosome_entry_site	2121248	2121254	.	-	.	ID=id2525;gbkey=RBS
NC_003888.3	RefSeq	gene	2121378	2122775	.	-	.	ID=gene1984;Dbxref=GeneID:1097418;Name=SC3C9.19c;gbkey=Gene;gene=SC3C9.19c;gene_biotype=protein_coding;gene_synonym=SC3C9.19c;locus_tag=SCO1984
NC_003888.3	RefSeq	CDS	2121378	2122775	.	-	0	ID=cds1948;Parent=gene1984;Dbxref=Genbank:NP_626246.1,GeneID:1097418;Name=NP_626246.1;Note=SC3C9.19c%2C probable hydrolase%2C len: 465 aa%3B similar to SW:ATZA_PSESD (EMBL:U55933) Pseudomonas sp. atrazine chlorohydrolase (EC 3.8.1.8) AtzA%2C 474 aa%3B fasta scores: opt: 448 Z-score: 490.2 bits: 100.0 E(): 1.1e-19%3B 33.258%25 identity in 445 overlap. Contains Pfam match to entry PF01685 ATZ_TRZ%2C Chlorohydrolase;gbkey=CDS;gene=SC3C9.19c;product=hydrolase;protein_id=NP_626246.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2121507	2122373	.	-	.	ID=id2526;Dbxref=GeneID:1097418;Note=Pfam match to entry PF01685 ATZ_TRZ%2C Chlorohydrolase%2C score 258.60%2C E-value 8.6e-74;gbkey=misc_feature;gene=SC3C9.19c
NC_003888.3	RefSeq	gene	2122775	2124631	.	-	.	ID=gene1985;Dbxref=GeneID:1097419;Name=SC3C9.20c;gbkey=Gene;gene=SC3C9.20c;gene_biotype=protein_coding;gene_synonym=SC3C9.20c;locus_tag=SCO1985
NC_003888.3	RefSeq	CDS	2122775	2124631	.	-	0	ID=cds1949;Parent=gene1985;Dbxref=Genbank:NP_626247.1,GeneID:1097419;Name=NP_626247.1;Note=SC3C9.20c%2C possible integral membrane protein%2C len: 618 aa%3B similar to TR:Q9FBT3 (EMBL:AL391072) Streptomyces coelicolor  integral membrane protein SC9A4.21%2C 645 aa%3B fasta scores: opt: 889 Z-score: 886.0 bits: 174.1 E(): 9.6e-42%3B 35.055%25 identity in 639 aa overlap. Contains possible hydrophobic membrane spanning regions at the N-terminal domain;gbkey=CDS;gene=SC3C9.20c;product=hypothetical protein;protein_id=NP_626247.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2124643	2124648	.	-	.	ID=id2527;gbkey=RBS
NC_003888.3	RefSeq	gene	2124799	2125581	.	-	.	ID=gene1986;Dbxref=GeneID:1097420;Name=SC3C9.21c;gbkey=Gene;gene=SC3C9.21c;gene_biotype=protein_coding;gene_synonym=SC3C9.21c;locus_tag=SCO1986
NC_003888.3	RefSeq	CDS	2124799	2125581	.	-	0	ID=cds1950;Parent=gene1986;Dbxref=Genbank:NP_626248.1,GeneID:1097420;Name=NP_626248.1;Note=SC3C9.21c%2C hypothetical protein%2C len: 260 aa%3B low similarity to TR:O54361 (EMBL:U73025) Staphylococcus aureus transposon TN5405 ORFX (hypothetical 32.9 kDa protein)%2C 289 aa%3B fasta scores: opt: 241 Z-score: 283.5 bits: 60.2 E(): 3.5e-08%3B 28.251%25 identity in 223 aa overlap;gbkey=CDS;gene=SC3C9.21c;product=hypothetical protein;protein_id=NP_626248.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2125591	2125597	.	-	.	ID=id2528;gbkey=RBS
NC_003888.3	RefSeq	gene	2125668	2126168	.	+	.	ID=gene1987;Dbxref=GeneID:1097421;Name=SC3C9.22;gbkey=Gene;gene=SC3C9.22;gene_biotype=protein_coding;gene_synonym=SC3C9.22,SC7H2.01;locus_tag=SCO1987
NC_003888.3	RefSeq	CDS	2125668	2126168	.	+	0	ID=cds1951;Parent=gene1987;Dbxref=Genbank:NP_733554.1,GeneID:1097421;Name=NP_733554.1;Note=SC7H2.01%2C partial CDS%2C unknown%2C len: >90aa%3B similar to the C-terminal region of several hypothetical proteins both prokaryote and eukaryote egs. SW:Y709_SYNY3 hypothetical protein from Synechocystis sp. strain PCC6803 (130 aa) fasta scores%3B opt: 100%2C z-score: 145.9%2C E(): 0.84%2C (34.9%25 identity in 83 aa overlap) and SW:UK14_CAPHI from Capra hircus (goat) (137 aa) fasta scores%3B opt: 96%2C z-score: 140.4%2C E(): 1.7%2C (34.6%25 identity in 81 aa overlap).~SC3C9.22%2C conserved hypothetical protein (fragment)%2C len: >115 aa%3B similar to N-terminal region of TR:BAB48518 (EMBL:AP002996) Rhizobium loti MLL1058 protein%2C 148 aa%3B fasta scores: opt: 175 Z-score: 218.8 bits: 46.1 E(): 0.00014%3B 40.789%25 identity in 76 aa overlap. Contains Pfam match to entry PF01042 UPF0076%2C YjgF family;gbkey=CDS;gene=SC3C9.22;product=hypothetical protein;protein_id=NP_733554.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2125776	2126009	.	+	.	ID=id2529;Dbxref=GeneID:1097421;Note=Pfam match to entry PF01042 UPF0076%2C YjgF family%2C score -28.50%2C E-value 0.35;gbkey=misc_feature;gene=SC3C9.22
NC_003888.3	RefSeq	gene	2126165	2126716	.	+	.	ID=gene1988;Dbxref=GeneID:1097422;Name=SC7H2.02;gbkey=Gene;gene=SC7H2.02;gene_biotype=protein_coding;gene_synonym=SC7H2.02;locus_tag=SCO1988
NC_003888.3	RefSeq	CDS	2126165	2126716	.	+	0	ID=cds1952;Parent=gene1988;Dbxref=Genbank:NP_626249.1,GeneID:1097422;Name=NP_626249.1;Note=SC7H2.02%2C possible acetyltransferase%2C len: 183 aa%3B similar to SW:YIAC_ECOLI hypothetical protein from Escherichia coli (146 aa) fasta scores%3B opt: 178%2C z-score: 227.9%2C E(): 2.3e-05%2C (27.2%25 identity in 147 aa overlap). Also has region of similarity to several acetyltransferases eg. TR:Q08414 (EMBL:X73149) nourseothricin acetyltransferase from Streptomyces noursei (189 aa) fasta scores%3B opt: 115%2C z-score: 150.4%2C E(): 0.47%2C (40.2%25 identity in 82 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SC7H2.02;product=hypothetical protein;protein_id=NP_626249.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2126270	2126635	.	+	.	ID=id2530;Dbxref=GeneID:1097422;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 43.70%2C E-value 4.2e-09.;gbkey=misc_feature;gene=SC7H2.02
NC_003888.3	RefSeq	stem_loop	2126715	2126795	.	+	.	ID=id2531;Note=Inverted repeat (Score 57: 23/26 ( 88%25) matches%2C 0 gaps) with potential 28 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2126802	2127773	.	-	.	ID=gene1989;Dbxref=GeneID:1097423;Name=SC7H2.03c;gbkey=Gene;gene=SC7H2.03c;gene_biotype=protein_coding;gene_synonym=SC7H2.03c;locus_tag=SCO1989
NC_003888.3	RefSeq	CDS	2126802	2127773	.	-	0	ID=cds1953;Parent=gene1989;Dbxref=Genbank:NP_626250.1,GeneID:1097423;Name=NP_626250.1;Note=SC7H2.03c%2C probable aminopeptidase%2C len: 323 aa%3B similar to many proline aminopeptidases e.g. SW:PIP_XANCI proline iminopeptidase from Xanthomonas campestris pv. citri (313 aa) fasta scores%3B opt: 848%2C z-score: 979.3%2C E(): 0%2C (44.4%25 identity in 320 aa overlap). Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SC7H2.03c;product=aminopeptidase;protein_id=NP_626250.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2126823	2127596	.	-	.	ID=id2532;Dbxref=GeneID:1097423;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 74.20%2C E-value 2.7e-18.;gbkey=misc_feature;gene=SC7H2.03c
NC_003888.3	RefSeq	gene	2127828	2128541	.	-	.	ID=gene1990;Dbxref=GeneID:1097424;Name=SC7H2.04c;gbkey=Gene;gene=SC7H2.04c;gene_biotype=protein_coding;gene_synonym=SC7H2.04c;locus_tag=SCO1990
NC_003888.3	RefSeq	CDS	2127828	2128541	.	-	0	ID=cds1954;Parent=gene1990;Dbxref=Genbank:NP_626251.1,GeneID:1097424;Name=NP_626251.1;Note=SC7H2.04c%2C unknown%2C len: 237aa%3B similar to SW:Y08N_MYCTU hypothetical protein from Mycobacterium tuberculosis (350 aa) fasta scores%3B opt: 870%2C z-score: 990.4%2C E(): 0%2C (57.1%25 identity in 231 aa overlap).;gbkey=CDS;gene=SC7H2.04c;product=hypothetical protein;protein_id=NP_626251.1;transl_table=11
NC_003888.3	RefSeq	gene	2128658	2129218	.	+	.	ID=gene1991;Dbxref=GeneID:1097425;Name=SC7H2.05;gbkey=Gene;gene=SC7H2.05;gene_biotype=protein_coding;gene_synonym=SC7H2.05;locus_tag=SCO1991
NC_003888.3	RefSeq	CDS	2128658	2129218	.	+	0	ID=cds1955;Parent=gene1991;Dbxref=Genbank:NP_626252.1,GeneID:1097425;Name=NP_626252.1;Note=SC7H2.05%2C hypothetical protein%2C len: 186 aa%3B similar to SW:YRFH_ECOLI hypothetical protein from Escherichia coli (133 aa) fasta scores%3B opt: 228%2C z-score: 249.5%2C E(): 1.4e-06%2C (35.2%25 identity in 122 aa overlap).;gbkey=CDS;gene=SC7H2.05;product=hypothetical protein;protein_id=NP_626252.1;transl_table=11
NC_003888.3	RefSeq	gene	2129270	2129776	.	-	.	ID=gene1992;Dbxref=GeneID:1097426;Name=SC7H2.06c;gbkey=Gene;gene=SC7H2.06c;gene_biotype=protein_coding;gene_synonym=SC7H2.06c;locus_tag=SCO1992
NC_003888.3	RefSeq	CDS	2129270	2129776	.	-	0	ID=cds1956;Parent=gene1992;Dbxref=Genbank:NP_626253.1,GeneID:1097426;Name=NP_626253.1;Note=SC7H2.06c%2C possible integral membrane protein%2C len: 168aa%3B contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC7H2.06c;product=hypothetical protein;protein_id=NP_626253.1;transl_table=11
NC_003888.3	RefSeq	gene	2129838	2130524	.	-	.	ID=gene1993;Dbxref=GeneID:1097427;Name=SC7H2.07c;gbkey=Gene;gene=SC7H2.07c;gene_biotype=protein_coding;gene_synonym=SC7H2.07c;locus_tag=SCO1993
NC_003888.3	RefSeq	CDS	2129838	2130524	.	-	0	ID=cds1957;Parent=gene1993;Dbxref=Genbank:NP_626254.1,GeneID:1097427;Name=NP_626254.1;Note=SC7H2.07c%2C unknown%2C len: 228aa;gbkey=CDS;gene=SC7H2.07c;product=hypothetical protein;protein_id=NP_626254.1;transl_table=11
NC_003888.3	RefSeq	gene	2130596	2130952	.	+	.	ID=gene1994;Dbxref=GeneID:1097428;Name=SC7H2.08;gbkey=Gene;gene=SC7H2.08;gene_biotype=protein_coding;gene_synonym=SC7H2.08;locus_tag=SCO1994
NC_003888.3	RefSeq	CDS	2130596	2130952	.	+	0	ID=cds1958;Parent=gene1994;Dbxref=Genbank:NP_626255.1,GeneID:1097428;Name=NP_626255.1;Note=SC7H2.08%2C possible integral membrane protein%2C len: 118aa%3B contains possible membrane spanning hydrophobic region.;gbkey=CDS;gene=SC7H2.08;product=hypothetical protein;protein_id=NP_626255.1;transl_table=11
NC_003888.3	RefSeq	gene	2130961	2131341	.	-	.	ID=gene1995;Dbxref=GeneID:1097429;Name=SC7H2.09c;gbkey=Gene;gene=SC7H2.09c;gene_biotype=protein_coding;gene_synonym=SC7H2.09c;locus_tag=SCO1995
NC_003888.3	RefSeq	CDS	2130961	2131341	.	-	0	ID=cds1959;Parent=gene1995;Dbxref=Genbank:NP_626256.1,GeneID:1097429;Name=NP_626256.1;Note=SC7H2.09c%2C unknown%2C len: 126aa;gbkey=CDS;gene=SC7H2.09c;product=hypothetical protein;protein_id=NP_626256.1;transl_table=11
NC_003888.3	RefSeq	gene	2131391	2131993	.	-	.	ID=gene1996;Dbxref=GeneID:1097430;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;gene_synonym=coaE,SC7H2.10c;locus_tag=SCO1996
NC_003888.3	RefSeq	CDS	2131391	2131993	.	-	0	ID=cds1960;Parent=gene1996;Dbxref=Genbank:NP_626257.1,GeneID:1097430;Name=NP_626257.1;Note=SC7H2.10c%2C coaE%2C dephospho-CoA kinase%2C len: 200 aa%3B similar to many e.g. SW:YTAG_BACSU hypothetical protein from Bacillus subtilis (197 aa) fasta scores%3B opt: 508%2C z-score: 575.3%2C E(): 1e-24%2C (42.2%25 identity in 192 aa overlap). Also similar to the N-terminal half of SW:Y14N_MYCTU hypothetical protein from Mycobacterium tuberculosis (407 aa) fasta scores%3B opt: 672%2C z-score: 751.8%2C E(): 0%2C (54.3%25 identity in 199 aa overlap). Similar to SW:COAE_ECOLI (EMBL:AE000119) Escherichia coli dephospho-CoA kinase (EC 2.7.1.24) CoaE or B0103%2C 206 aa%3B fasta scores: opt: 444 Z-score: 491.1 E(): 1e-19%3B 44.509%25 identity in 173 aa overlap. Contains Pfam match to entry PF01121 UPF0038%2C Uncharacterized protein family UPF0038 and Prosite match to PS01294 Uncharacterized protein family UPF0038 signature;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=NP_626257.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2131451	2131990	.	-	.	ID=id2533;Dbxref=GeneID:1097430;Note=Pfam match to entry PF01121 UPF0038%2C Uncharacterized protein family UPF0038%2C score 276.70%2C E-value 3e-79;gbkey=misc_feature;gene=coaE
NC_003888.3	RefSeq	sequence_feature	2131721	2131810	.	-	.	ID=id2534;Dbxref=GeneID:1097430;Note=PS01294 Uncharacterized protein family UPF0038 signature.;gbkey=misc_feature;gene=coaE
NC_003888.3	RefSeq	gene	2132026	2132964	.	-	.	ID=gene1997;Dbxref=GeneID:1097431;Name=SC7H2.11c;gbkey=Gene;gene=SC7H2.11c;gene_biotype=protein_coding;gene_synonym=SC7H2.11c;locus_tag=SCO1997
NC_003888.3	RefSeq	CDS	2132026	2132964	.	-	0	ID=cds1961;Parent=gene1997;Dbxref=Genbank:NP_626258.1,GeneID:1097431;Name=NP_626258.1;Note=SC7H2.11c%2C unknown%2C len: 312 aa%3B similar to TR:O07213 (EMBL:Z96072) hypothetical protein from Mycobacterium tuberculosis (324 aa) fasta scores%3B opt: 770%2C z-score: 866.1%2C E(): 0%2C (40.9%25 identity in 286 aa overlap);gbkey=CDS;gene=SC7H2.11c;product=hypothetical protein;protein_id=NP_626258.1;transl_table=11
NC_003888.3	RefSeq	gene	2133121	2134629	.	-	.	ID=gene1998;Dbxref=GeneID:1097432;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;gene_synonym=SC7H2.12c;locus_tag=SCO1998
NC_003888.3	RefSeq	CDS	2133121	2134629	.	-	0	ID=cds1962;Parent=gene1998;Dbxref=Genbank:NP_626259.1,GeneID:1097432;Name=NP_626259.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=NP_626259.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2133532	2133753	.	-	.	ID=id2535;Dbxref=GeneID:1097432;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 110.50%2C E-value 3.1e-29;gbkey=misc_feature;gene=rpsA
NC_003888.3	RefSeq	sequence_feature	2133790	2134008	.	-	.	ID=id2536;Dbxref=GeneID:1097432;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 117.50%2C E-value 2.4e-31;gbkey=misc_feature;gene=rpsA
NC_003888.3	RefSeq	sequence_feature	2134057	2134266	.	-	.	ID=id2537;Dbxref=GeneID:1097432;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 71.90%2C E-value 1.3e-17;gbkey=misc_feature;gene=rpsA
NC_003888.3	RefSeq	sequence_feature	2134306	2134527	.	-	.	ID=id2538;Dbxref=GeneID:1097432;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 76.40%2C E-value 6.1e-19;gbkey=misc_feature;gene=rpsA
NC_003888.3	RefSeq	gene	2135154	2135816	.	+	.	ID=gene1999;Dbxref=GeneID:1097433;Name=SC7H2.13;gbkey=Gene;gene=SC7H2.13;gene_biotype=protein_coding;gene_synonym=SC7H2.13;locus_tag=SCO1999
NC_003888.3	RefSeq	CDS	2135154	2135816	.	+	0	ID=cds1963;Parent=gene1999;Dbxref=Genbank:NP_626260.1,GeneID:1097433;Name=NP_626260.1;Note=SC7H2.13%2C hypothetical protein%2C len: 220 aa%3B similar to many some of which are proposed to have methyltransferase activity egs. TR:CAB44537 (EMBL:AL078618) ubiquinone/menaquinone methyltransferase from Streptomyces coelicolor (231 aa) fasta scores%3B opt: 199%2C z-score: 247.0%2C E(): 2e-06%2C (40.4%25 identity in 104 aa overlap) and TR:O06424 (EMBL:Z95558) hypothetical protein from Mycobacterium tuberculosis (234 aa) fasta scores%3B opt: 191%2C z-score: 237.3%2C E(): 6.8e-06%2C (42.7%25 identity in 96 aa overlap).;gbkey=CDS;gene=SC7H2.13;product=hypothetical protein;protein_id=NP_626260.1;transl_table=11
NC_003888.3	RefSeq	gene	2135883	2138879	.	+	.	ID=gene2000;Dbxref=GeneID:1097434;Name=SC7H2.14;gbkey=Gene;gene=SC7H2.14;gene_biotype=protein_coding;gene_synonym=SC7H2.14;locus_tag=SCO2000
NC_003888.3	RefSeq	CDS	2135883	2138879	.	+	0	ID=cds1964;Parent=gene2000;Dbxref=Genbank:NP_626261.1,GeneID:1097434;Name=NP_626261.1;Note=SC7H2.14%2C possible ATP-binding RNA helicase%2C len: 998 aa%3B similar to many proposed helicases eg. SW:HRPB_ECOLI ATP-dependent helicase from Escherichia coli (809 aa) fasta scores%3B opt: 889%2C z-score: 783.0%2C E(): 0%2C (33.6%25 identity in 998 aa overlap). Contains a repeat region which does not appear in homologues: 8 x GDDRR(R/G)QRATVES. Also contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00037 Myb DNA-binding domain repeat signature 1.;gbkey=CDS;gene=SC7H2.14;product=ATP-binding RNA helicase;protein_id=NP_626261.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2135979	2136002	.	+	.	ID=id2539;Dbxref=GeneID:1097434;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC7H2.14
NC_003888.3	RefSeq	repeat_region	2137566	2137877	.	+	.	ID=id2540;Dbxref=GeneID:1097434;Note=translates to 8 x GDDRR(R/G)QRATVES repeat in CDS SC7H2.14.;gbkey=repeat_region;gene=SC7H2.14
NC_003888.3	RefSeq	gene	2138930	2140723	.	-	.	ID=gene2001;Dbxref=GeneID:1097435;Name=SC7H2.15c;gbkey=Gene;gene=SC7H2.15c;gene_biotype=protein_coding;gene_synonym=SC7H2.15c;locus_tag=SCO2001
NC_003888.3	RefSeq	CDS	2138930	2140723	.	-	0	ID=cds1965;Parent=gene2001;Dbxref=Genbank:NP_626262.1,GeneID:1097435;Name=NP_626262.1;Note=SC7H2.15c%2C hypothetical protein%2C len: 597 aa%3B similar to TR:O86313 (EMBL:Z98260) hypothetical protein from Mycobacterium tuberculosis (411 aa) fasta scores%3B opt: 548%2C z-score: 447.1%2C E(): 1.4e-17%2C (33.7%25 identity in 380 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7H2.15c;product=hypothetical protein;protein_id=NP_626262.1;transl_table=11
NC_003888.3	RefSeq	gene	2141042	2141398	.	-	.	ID=gene2002;Dbxref=GeneID:1097436;Name=SC7H2.16c;gbkey=Gene;gene=SC7H2.16c;gene_biotype=protein_coding;gene_synonym=SC7H2.16c;locus_tag=SCO2002
NC_003888.3	RefSeq	CDS	2141042	2141398	.	-	0	ID=cds1966;Parent=gene2002;Dbxref=Genbank:NP_626263.1,GeneID:1097436;Name=NP_626263.1;Note=SC7H2.16c%2C unknown%2C len: 118aa;gbkey=CDS;gene=SC7H2.16c;product=hypothetical protein;protein_id=NP_626263.1;transl_table=11
NC_003888.3	RefSeq	gene	2141659	2144382	.	-	.	ID=gene2003;Dbxref=GeneID:1097437;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;gene_synonym=polA,SC7H2.17c;locus_tag=SCO2003
NC_003888.3	RefSeq	CDS	2141659	2144382	.	-	0	ID=cds1967;Parent=gene2003;Dbxref=Genbank:NP_626264.1,GeneID:1097437;Name=NP_626264.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;gene=polA;product=DNA polymerase I;protein_id=NP_626264.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2141773	2142396	.	-	.	ID=id2541;Dbxref=GeneID:1097437;Note=Pfam match to entry PF00476 DNA_pol_A%2C DNA polymerase family A%2C score 343.40%2C E-value 2.4e-99;gbkey=misc_feature;gene=polA
NC_003888.3	RefSeq	sequence_feature	2143477	2144340	.	-	.	ID=id2542;Dbxref=GeneID:1097437;Note=Pfam match to entry PF01367 5_3_exonuclease%2C 5'-3' exonuclease%2C score 478.90%2C E-value 4.1e-140;gbkey=misc_feature;gene=polA
NC_003888.3	RefSeq	gene	2144639	2146918	.	+	.	ID=gene2004;Dbxref=GeneID:1097438;Name=SC7H2.18;gbkey=Gene;gene=SC7H2.18;gene_biotype=protein_coding;gene_synonym=SC7H2.18;locus_tag=SCO2004
NC_003888.3	RefSeq	CDS	2144639	2146918	.	+	0	ID=cds1968;Parent=gene2004;Dbxref=Genbank:NP_626265.1,GeneID:1097438;Name=NP_626265.1;Note=SC7H2.18%2C possible formate dehydrogenase%2C len: 759 aa%3B similar to many formate dehydrogenase e.g. SW:FDHF_ECOLI formate dehydrogenase H from Escherichia coli (715 aa) fasta scores%3B opt: 386%2C z-score: 441.8%2C E(): 2.8e-17%2C (26.3%25 identity in 670 aa overlap). Also similar to SW:YX31_MYCTU hypothetical protein from Mycobacterium tuberculosis (779 aa) fasta scores%3B opt: 3038%2C z-score: 3497.1%2C E(): 0%2C (59.7%25 identity in 767 aa overlap).;gbkey=CDS;gene=SC7H2.18;product=formate dehydrogenase;protein_id=NP_626265.1;transl_table=11
NC_003888.3	RefSeq	gene	2146962	2147501	.	+	.	ID=gene2005;Dbxref=GeneID:1097439;Name=SC7H2.19;gbkey=Gene;gene=SC7H2.19;gene_biotype=protein_coding;gene_synonym=SC7H2.19;locus_tag=SCO2005
NC_003888.3	RefSeq	CDS	2146962	2147501	.	+	0	ID=cds1969;Parent=gene2005;Dbxref=Genbank:NP_626266.1,GeneID:1097439;Name=NP_626266.1;Note=SC7H2.19%2C unknown%2C len: 179aa%3B similar to many of undefined function egs. SW:YBDB_ECOLI hypothetical protein from Escherichia coli (137 aa) fasta scores%3B opt: 339%2C z-score: 407.0%2C E(): 2.5e-15%2C (50.0%25 identity in 116 aa overlap) and SW:CMA2_BACSU ComA protein%2C involved in competence (126 aa) fasta scores%3B opt: 312%2C z-score: 376.3%2C E(): 1.3e-13%2C (44.5%25 identity in 110 aa overlap).;gbkey=CDS;gene=SC7H2.19;product=hypothetical protein;protein_id=NP_626266.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	2147498	2147624	.	+	.	ID=id2543;Note=Inverted repeat (26/28 ( 92%25) matches%2C 0 gaps) with potential 93 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2147859	2148404	.	+	.	ID=gene2006;Dbxref=GeneID:1097440;Name=SC7H2.20;gbkey=Gene;gene=SC7H2.20;gene_biotype=protein_coding;gene_synonym=SC7H2.20;locus_tag=SCO2006
NC_003888.3	RefSeq	CDS	2147859	2148404	.	+	0	ID=cds1970;Parent=gene2006;Dbxref=Genbank:NP_626267.1,GeneID:1097440;Name=NP_626267.1;Note=SC7H2.20%2C unknown%2C len: 181aa;gbkey=CDS;gene=SC7H2.20;product=hypothetical protein;protein_id=NP_626267.1;transl_table=11
NC_003888.3	RefSeq	gene	2148401	2148997	.	+	.	ID=gene2007;Dbxref=GeneID:1097441;Name=SC7H2.21;gbkey=Gene;gene=SC7H2.21;gene_biotype=protein_coding;gene_synonym=SC7H2.21;locus_tag=SCO2007
NC_003888.3	RefSeq	CDS	2148401	2148997	.	+	0	ID=cds1971;Parent=gene2007;Dbxref=Genbank:NP_626268.1,GeneID:1097441;Name=NP_626268.1;Note=SC7H2.21%2C unknown%2C len: 198aa;gbkey=CDS;gene=SC7H2.21;product=hypothetical protein;protein_id=NP_626268.1;transl_table=11
NC_003888.3	RefSeq	gene	2149264	2150520	.	+	.	ID=gene2008;Dbxref=GeneID:1097442;Name=SC7H2.22;gbkey=Gene;gene=SC7H2.22;gene_biotype=protein_coding;gene_synonym=SC7H2.22;locus_tag=SCO2008
NC_003888.3	RefSeq	CDS	2149264	2150520	.	+	0	ID=cds1972;Parent=gene2008;Dbxref=Genbank:NP_626269.1,GeneID:1097442;Name=NP_626269.1;Note=SC7H2.22%2C possible branched-chain amino acid binding protein%2C len: 481aa%3B similar to many eg. SW:LIVK_ECOLI leucine-specific binding protein from Escherichia coli (369 aa) fasta scores%3B opt: 360%2C z-score: 374.0%2C E(): 1.6e-13%2C (28.4%25 identity in 352 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SC7H2.22;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=NP_626269.1;transl_table=11
NC_003888.3	RefSeq	gene	2150635	2151567	.	+	.	ID=gene2009;Dbxref=GeneID:1097443;Name=SC7H2.23;gbkey=Gene;gene=SC7H2.23;gene_biotype=protein_coding;gene_synonym=SC7H2.23;locus_tag=SCO2009
NC_003888.3	RefSeq	CDS	2150635	2151567	.	+	0	ID=cds1973;Parent=gene2009;Dbxref=Genbank:NP_626270.1,GeneID:1097443;Name=NP_626270.1;Note=SC7H2.23%2C probable branched-chain amino acid ABC transporter permease%2C len: 310aa%3B similar to many eg. SW:LIVH_SALTY high affinity branched-chain amino acid ABC transporter permease from Salmonella typhimurium (308 aa) fasta scores%3B opt: 711%2C z-score: 782.4%2C E(): 0%2C (43.5%25 identity in 306 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC7H2.23;product=branched-chain amino acid ABC transporter permease;protein_id=NP_626270.1;transl_table=11
NC_003888.3	RefSeq	gene	2151573	2153399	.	+	.	ID=gene2010;Dbxref=GeneID:1097444;Name=SC7H2.24;gbkey=Gene;gene=SC7H2.24;gene_biotype=protein_coding;gene_synonym=SC7H2.24;locus_tag=SCO2010
NC_003888.3	RefSeq	CDS	2151573	2153399	.	+	0	ID=cds1974;Parent=gene2010;Dbxref=Genbank:NP_626271.1,GeneID:1097444;Name=NP_626271.1;Note=SC7H2.24%2C probable branched-chain amino acid ABC transporter permease%2C len: 310aa%3B region from 200-608aa similar to many eg. SW:LIVM_SALTY high affinity branched-chain amino acid ABC transporter permease from Salmonella typhimurium (425 aa) fasta scores%3B opt: 633%2C z-score: 702.7%2C E(): 8.1e-32%2C (36.8%25 identity in 400 aa overlap).;gbkey=CDS;gene=SC7H2.24;product=branched-chain amino acid ABC transporter permease;protein_id=NP_626271.1;transl_table=11
NC_003888.3	RefSeq	gene	2153405	2154334	.	+	.	ID=gene2011;Dbxref=GeneID:1097445;Name=SC7H2.25;gbkey=Gene;gene=SC7H2.25;gene_biotype=protein_coding;gene_synonym=SC7H2.25;locus_tag=SCO2011
NC_003888.3	RefSeq	CDS	2153405	2154334	.	+	0	ID=cds1975;Parent=gene2011;Dbxref=Genbank:NP_626272.1,GeneID:1097445;Name=NP_626272.1;Note=SC7H2.25%2C probable branched-chain amino acid transport ATP-binding protein%2C len: 309aa%3B similar to many eg. SW:LIVG_ECOLI branched-chain amino acid transport ATP-binding protein from Escherichia coli (255 aa) fasta scores%3B opt: 770%2C z-score: 837.9%2C E(): 0%2C (46.8%25 identity in 250 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC7H2.25;product=ABC transporter ATP-binding protein;protein_id=NP_626272.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2153543	2154136	.	+	.	ID=id2544;Dbxref=GeneID:1097445;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 200.80%2C E-value 2.1e-56;gbkey=misc_feature;gene=SC7H2.25
NC_003888.3	RefSeq	sequence_feature	2153564	2153587	.	+	.	ID=id2545;Dbxref=GeneID:1097445;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC7H2.25
NC_003888.3	RefSeq	gene	2154331	2155047	.	+	.	ID=gene2012;Dbxref=GeneID:1097446;Name=SC7H2.26;gbkey=Gene;gene=SC7H2.26;gene_biotype=protein_coding;gene_synonym=SC7H2.26;locus_tag=SCO2012
NC_003888.3	RefSeq	CDS	2154331	2155047	.	+	0	ID=cds1976;Parent=gene2012;Dbxref=Genbank:NP_626273.1,GeneID:1097446;Name=NP_626273.1;Note=SC7H2.26%2C probable branched-chain amino acid transport ATP-binding protein%2C len: 238aa%3B similar to many eg. SW:LIVF_ECOLI branched-chain amino acid transport ATP-binding protein from Escherichia coli (237 aa) fasta scores%3B opt: 774%2C z-score: 860.8%2C E(): 0%2C (52.4%25 identity in 233 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature.;gbkey=CDS;gene=SC7H2.26;product=ABC transporter ATP-binding protein;protein_id=NP_626273.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2154418	2154969	.	+	.	ID=id2546;Dbxref=GeneID:1097446;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 181.20%2C E-value 1.7e-50;gbkey=misc_feature;gene=SC7H2.26
NC_003888.3	RefSeq	sequence_feature	2154439	2154462	.	+	.	ID=id2547;Dbxref=GeneID:1097446;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC7H2.26
NC_003888.3	RefSeq	sequence_feature	2154742	2154786	.	+	.	ID=id2548;Dbxref=GeneID:1097446;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC7H2.26
NC_003888.3	RefSeq	repeat_region	2155061	2155114	.	+	.	ID=id2549;Note=Inverted repeat (21/24 ( 87%25) matches%2C 0 gaps) with potential 6 base loop.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2155123	2155779	.	-	.	ID=gene2013;Dbxref=GeneID:1097447;Name=SC7H2.27c;gbkey=Gene;gene=SC7H2.27c;gene_biotype=protein_coding;gene_synonym=SC7H2.27c;locus_tag=SCO2013
NC_003888.3	RefSeq	CDS	2155123	2155779	.	-	0	ID=cds1977;Parent=gene2013;Dbxref=Genbank:NP_626274.1,GeneID:1097447;Name=NP_626274.1;Note=SC7H2.27c%2C probable two-component system response regulator%2C len: 218aa%3B similar to many eg. TR:Q53894 (EMBL:U51332) AbsA2 response regulator from Streptomyces coelicolor (222 aa) fasta scores%3B opt: 313%2C z-score: 359.0%2C E(): 1.1e-12%2C (36.1%25 identity in 155 aa overlap). Also similar to TR:O06143 (EMBL:Z95554) hypothetical protein from Mycobacterium tuberculosis (205 aa) fasta scores%3B opt: 880%2C z-score: 986.3%2C E(): 0%2C (69.4%25 identity in 196 aa overlap). Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain.;gbkey=CDS;gene=SC7H2.27c;product=two-component system response regulator;protein_id=NP_626274.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2155372	2155707	.	-	.	ID=id2550;Dbxref=GeneID:1097447;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 138.20%2C E-value 1.5e-37;gbkey=misc_feature;gene=SC7H2.27c
NC_003888.3	RefSeq	gene	2155886	2155958	.	+	.	ID=gene2014;Dbxref=GeneID:3240009;Name=SCOt09;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt09
NC_003888.3	RefSeq	tRNA	2155886	2155958	.	+	.	ID=rna14;Parent=gene2014;Dbxref=GeneID:3240009;Note=tRNA Leu anticodon CAA%2C Cove score 48.90;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	exon	2155886	2155958	.	+	.	ID=id2551;Parent=rna14;Dbxref=GeneID:3240009;Note=tRNA Leu anticodon CAA%2C Cove score 48.90;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	gene	2156337	2157773	.	-	.	ID=gene2015;Dbxref=GeneID:1097448;Name=pyk1;gbkey=Gene;gene=pyk1;gene_biotype=protein_coding;gene_synonym=pyk1,SC7H2.28c;locus_tag=SCO2014
NC_003888.3	RefSeq	CDS	2156337	2157773	.	-	0	ID=cds1978;Parent=gene2015;Dbxref=Genbank:NP_626275.1,GeneID:1097448;Name=NP_626275.1;Note=SC7H2.28c%2C pyk1%2C pyruvate kinase%2C len: 478 aa%3B strongly similar to many e.g. SW:KPYK_CORGL pyruvate kinase from Corynebacterium glutamicum (475 aa) fasta scores%3B opt: 1800%2C z-score: 2008.1%2C E(): 0%2C (59.6%25 identity in 473 aa overlap). Contains Pfam match to entry PF00224 PK%2C Pyruvate kinase and Prosite match to PS00110 Pyruvate kinase active site signature.;gbkey=CDS;gene=pyk1;product=pyruvate kinase;protein_id=NP_626275.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2156361	2157770	.	-	.	ID=id2552;Dbxref=GeneID:1097448;Note=Pfam match to entry PF00224 PK%2C Pyruvate kinase%2C score 587.60%2C E-value 7.7e-173;gbkey=misc_feature;gene=pyk1
NC_003888.3	RefSeq	sequence_feature	2157099	2157137	.	-	.	ID=id2553;Dbxref=GeneID:1097448;Note=PS00110 Pyruvate kinase active site signature.;gbkey=misc_feature;gene=pyk1
NC_003888.3	RefSeq	gene	2157990	2159798	.	+	.	ID=gene2016;Dbxref=GeneID:1097449;Name=SC7H2.29;gbkey=Gene;gene=SC7H2.29;gene_biotype=protein_coding;gene_synonym=SC7H2.29;locus_tag=SCO2015
NC_003888.3	RefSeq	CDS	2157990	2159798	.	+	0	ID=cds1979;Parent=gene2016;Dbxref=Genbank:NP_626276.1,GeneID:1097449;Name=NP_626276.1;Note=SC7H2.29%2C possible  nucleotidase%2C len: 602 aa%3B similar to many e.g. SW:CN16_ECOLI periplasmic 2'%2C3'-cyclic phosphodiesterase from Escherichia coli (647 aa) fasta scores%3B opt: 577%2C z-score: 618.9%2C E(): 3.8e-27%2C (32.3%25 identity in 595 aa overlap). Contains Pfam match to entry PF01009 5_nucleotidase%2C 5'-nucleotidase and Prosite match to PS00786 5'-nucleotidase signature 2. Also has possible N-terminal signal sequence.;gbkey=CDS;gene=SC7H2.29;product=nucleotidase;protein_id=NP_626276.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2158029	2159678	.	+	.	ID=id2554;Dbxref=GeneID:1097449;Note=Pfam match to entry PF01009 5_nucleotidase%2C 5'-nucleotidase%2C score 257.70%2C E-value 1.5e-73;gbkey=misc_feature;gene=SC7H2.29
NC_003888.3	RefSeq	sequence_feature	2158416	2158451	.	+	.	ID=id2555;Dbxref=GeneID:1097449;Note=PS00786 5'-nucleotidase signature 2.;gbkey=misc_feature;gene=SC7H2.29
NC_003888.3	RefSeq	gene	2159817	2161229	.	-	.	ID=gene2017;Dbxref=GeneID:1097450;Name=SC7H2.30c;gbkey=Gene;gene=SC7H2.30c;gene_biotype=protein_coding;gene_synonym=SC7H2.30c;locus_tag=SCO2016
NC_003888.3	RefSeq	CDS	2159817	2161229	.	-	0	ID=cds1980;Parent=gene2017;Dbxref=Genbank:NP_626277.1,GeneID:1097450;Name=NP_626277.1;Note=SC7H2.30c%2C possible monooxygenase%2C len: 470 aa%3B similar to many e.g. SW:IUCD_ECOLI L-lysine 6-monooxygenase from Escherichia coli (425 aa) fasta scores%3B opt: 393%2C z-score: 466.0%2C E(): 1.2e-18%2C (34.4%25 identity in 425 aa overlap).;gbkey=CDS;gene=SC7H2.30c;product=monooxygenase;protein_id=NP_626277.1;transl_table=11
NC_003888.3	RefSeq	gene	2161226	2162584	.	-	.	ID=gene2018;Dbxref=GeneID:1097451;Name=SC7H2.31c;gbkey=Gene;gene=SC7H2.31c;gene_biotype=protein_coding;gene_synonym=SC7H2.31c;locus_tag=SCO2017
NC_003888.3	RefSeq	CDS	2161226	2162584	.	-	0	ID=cds1981;Parent=gene2018;Dbxref=Genbank:NP_626278.1,GeneID:1097451;Name=NP_626278.1;Note=SC7H2.31c%2C possible amino acid decarboxylase%2C len: 452aa%3B similar to many eg. TR:Q43908 (EMBL:D55724) L-2%2C4-diaminobutyrate decarboxylase of Acinetobacter baumannii (510 aa) fasta scores%3B opt: 532%2C z-score: 544.9%2C E(): 5e-23%2C (31.8%25 identity in 431 aa overlap). Contains Pfam match to entry PF00282 pyridoxal_deC%2C Pyridoxal-dependent decarboxylase conserved domain.;gbkey=CDS;gene=SC7H2.31c;product=amino acid decarboxylase;protein_id=NP_626278.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2161409	2162191	.	-	.	ID=id2556;Dbxref=GeneID:1097451;Note=Pfam match to entry PF00282 pyridoxal_deC%2C Pyridoxal-dependent decarboxylase conserved domain%2C score 89.20%2C E-value 3.7e-25;gbkey=misc_feature;gene=SC7H2.31c
NC_003888.3	RefSeq	gene	2162746	2165253	.	-	.	ID=gene2019;Dbxref=GeneID:1097452;Name=SC7H2.32c;gbkey=Gene;gene=SC7H2.32c;gene_biotype=protein_coding;gene_synonym=SC7H2.32c;locus_tag=SCO2018
NC_003888.3	RefSeq	CDS	2162746	2165253	.	-	0	ID=cds1982;Parent=gene2019;Dbxref=Genbank:NP_626279.1,GeneID:1097452;Name=NP_626279.1;Note=SC7H2.32c%2C possible aminopeptidase%2C len: 835aa%3B similar to many eg. SW:AMPN_LACDL lysyl aminopeptidase from Lactobacillus delbruckii ssp. lactis (842 aa) fasta scores%3B opt: 705%2C z-score: 805.5%2C E(): 0%2C (27.7%25 identity in 622 aa overlap). Also similar to TR:O53194 (EMBL:AL021246) aminopeptidase from Mycobacterium tuberculosis (861 aa) fasta scores%3B opt: 1490%2C z-score: 1707.1%2C E(): 0%2C (39.6%25 identity in 867 aa overlap). Contains Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1 and Prosite match to PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;gbkey=CDS;gene=SC7H2.32c;product=aminopeptidase;protein_id=NP_626279.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2164096	2165202	.	-	.	ID=id2557;Dbxref=GeneID:1097452;Note=Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1%2C score 88.50%2C E-value 1.4e-22;gbkey=misc_feature;gene=SC7H2.32c
NC_003888.3	RefSeq	sequence_feature	2164348	2164377	.	-	.	ID=id2558;Dbxref=GeneID:1097452;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;gbkey=misc_feature;gene=SC7H2.32c
NC_003888.3	RefSeq	gene	2165374	2165724	.	-	.	ID=gene2020;Dbxref=GeneID:1097453;Name=SC7H2.33c;gbkey=Gene;gene=SC7H2.33c;gene_biotype=protein_coding;gene_synonym=SC7H2.33c;locus_tag=SCO2019
NC_003888.3	RefSeq	CDS	2165374	2165724	.	-	0	ID=cds1983;Parent=gene2020;Dbxref=Genbank:NP_626280.1,GeneID:1097453;Name=NP_626280.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;gene=SC7H2.33c;product=chorismate mutase;protein_id=NP_626280.1;transl_table=11
NC_003888.3	RefSeq	gene	2165859	2166758	.	+	.	ID=gene2021;Dbxref=GeneID:1097454;Name=SC7H2.34;gbkey=Gene;gene=SC7H2.34;gene_biotype=protein_coding;gene_synonym=SC7H2.34;locus_tag=SCO2020
NC_003888.3	RefSeq	CDS	2165859	2166758	.	+	0	ID=cds1984;Parent=gene2021;Dbxref=Genbank:NP_626281.1,GeneID:1097454;Name=NP_626281.1;Note=SC7H2.34%2C unknown%2C len: 299aa;gbkey=CDS;gene=SC7H2.34;product=hypothetical protein;protein_id=NP_626281.1;transl_table=11
NC_003888.3	RefSeq	gene	2166835	2167428	.	+	.	ID=gene2022;Dbxref=GeneID:1097455;Name=SC7H2.35;gbkey=Gene;gene=SC7H2.35;gene_biotype=protein_coding;gene_synonym=SC7H2.35;locus_tag=SCO2021
NC_003888.3	RefSeq	CDS	2166835	2167428	.	+	0	ID=cds1985;Parent=gene2022;Dbxref=Genbank:NP_626282.1,GeneID:1097455;Name=NP_626282.1;Note=SC7H2.35%2C hypothetical protein%2C len: 197 aa%3B similar to other hypothetical protein eg. TR:O06384 (EMBL:Z95436) hypothetical protein from Mycobacterium tuberculosis (240 aa) fasta scores%3B opt: 215%2C z-score: 248.4%2C E(): 1.6e-06%2C (28.1%25 identity in 199 aa overlap).;gbkey=CDS;gene=SC7H2.35;product=hypothetical protein;protein_id=NP_626282.1;transl_table=11
NC_003888.3	RefSeq	gene	2167476	2168234	.	-	.	ID=gene2023;Dbxref=GeneID:1097456;Name=SC7H2.36c;gbkey=Gene;gene=SC7H2.36c;gene_biotype=protein_coding;gene_synonym=SC7H2.36c;locus_tag=SCO2022
NC_003888.3	RefSeq	CDS	2167476	2168234	.	-	0	ID=cds1986;Parent=gene2023;Dbxref=Genbank:NP_626283.1,GeneID:1097456;Name=NP_626283.1;Note=SC7H2.36c%2C unknown%2C len: 252 aa%3B similar to SW:YCBR_BACSU hypothetical protein from Bacillus subtilis (243 aa) fasta scores%3B opt: 421%2C z-score: 523.5%2C E(): 7.8e-22%2C (32.8%25 identity in 229 aa overlap);gbkey=CDS;gene=SC7H2.36c;product=hypothetical protein;protein_id=NP_626283.1;transl_table=11
NC_003888.3	RefSeq	gene	2168433	2169291	.	+	.	ID=gene2024;Dbxref=GeneID:1097457;Name=SC3A3.01;gbkey=Gene;gene=SC3A3.01;gene_biotype=protein_coding;gene_synonym=SC3A3.01;locus_tag=SCO2023
NC_003888.3	RefSeq	CDS	2168433	2169291	.	+	1	ID=cds1987;Parent=gene2024;Dbxref=Genbank:NP_733555.1,GeneID:1097457;Name=NP_733555.1;Note=SC3A3.01%2C possible membrane protein%2C partial CDS%2C len: >285 aa%3B similar to TR:O53632 (EMBL:AL021926) Mycobacterium tuberculosis transmembrane protein (249 aa)%2C fasta scores%3B opt: 375 z-score: 425.6 E(): 2.3e-16%2C 39.4%25 identity in 282 aa overlap and SCH69.25C (EMBL:AL079308) S.coelicolor possible membrane protein (297 aa) (39.4%25 identity in 284 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC3A3.01;partial=true;product=hypothetical protein;protein_id=NP_733555.1;start_range=.,2168433;transl_table=11
NC_003888.3	RefSeq	gene	2169305	2170222	.	+	.	ID=gene2025;Dbxref=GeneID:1097458;Name=SC3A3.02;gbkey=Gene;gene=SC3A3.02;gene_biotype=protein_coding;gene_synonym=SC3A3.02;locus_tag=SCO2024
NC_003888.3	RefSeq	CDS	2169305	2170222	.	+	0	ID=cds1988;Parent=gene2025;Dbxref=Genbank:NP_626284.1,GeneID:1097458;Name=NP_626284.1;Note=SC3A3.02%2C probable chitosanase (hypothetical protein)%2C len: 305 aa%3B similar to chitosanases e.g. SW:CHIS_STRSQ (EMBL:L07779)%2C csn%2C Streptomyces sp. (strain N174) chitosanase precursor (278 aa)%2C fasta scores%3B opt: 893 z-score: 1036.3 E(): 0%2C 58.4%25 identity in 233 aa overlap. Has an approx. 70 aa N-terminal extension not present in homologues which includes a possible N-terminal signal sequence. Contains Pfam match to entry PF01374 Glyco_hydro_46%2C Glycosyl hydrolase family 46;gbkey=CDS;gene=SC3A3.02;product=chitosanase;protein_id=NP_626284.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2169551	2170186	.	+	.	ID=id2559;Dbxref=GeneID:1097458;Note=Pfam match to entry PF01374 Glyco_hydro_46%2C Glycosyl hydrolase family 46%2C score 247.20%2C E-value 2.3e-70;gbkey=misc_feature;gene=SC3A3.02
NC_003888.3	RefSeq	gene	2170384	2171847	.	-	.	ID=gene2026;Dbxref=GeneID:1097459;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;gene_synonym=SC3A3.03c;locus_tag=SCO2025
NC_003888.3	RefSeq	CDS	2170384	2171847	.	-	0	ID=cds1989;Parent=gene2026;Dbxref=Genbank:NP_626285.1,GeneID:1097459;Name=NP_626285.1;Note=glutamate synthase is composed of subunits alpha and beta%3B beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase%3B provides electrons to the alpha subunit%2C which binds L-glutamine and 2-oxoglutarate and forms L-glutamate;gbkey=CDS;gene=gltD;product=glutamate synthase;protein_id=NP_626285.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2171647	2171718	.	-	.	ID=id2560;Dbxref=GeneID:1097459;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 10.70%2C E-value 0.073;gbkey=misc_feature;gene=gltD
NC_003888.3	RefSeq	gene	2171840	2176384	.	-	.	ID=gene2027;Dbxref=GeneID:1097460;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;gene_synonym=gltB,SC3A3.04c;locus_tag=SCO2026
NC_003888.3	RefSeq	CDS	2171840	2176384	.	-	0	ID=cds1990;Parent=gene2027;Dbxref=Genbank:NP_626286.1,GeneID:1097460;Name=NP_626286.1;Note=SC3A3.04c%2C gltB%2C probable glutamate synthase large subunit%2C len: 1514 aa%3B similar to bacterial glutamate synthases e.g. TR:Q51583 (EMBL:D85230)%2C gltB%2C Plectonema boryanum large subunit of NADH-dependent glutamate synthase (1530 aa)%2C fasta scores%3B opt: 5662 z-score: 6172.3 E(): 0%2C 56.4%25 identity in 1518 aa overlap. Also similar to part of eukaryotic glutamate synthases e.g. SW:GLSN_MEDSA (EMBL:L01660) Medicago sativa (Alfalfa) Glutamate synthase [NADH] precursor (2194 aa) (49.9%25 identity in 1577 aa overlap);gbkey=CDS;gene=gltB;product=glutamate synthase;protein_id=NP_626286.1;transl_table=11
NC_003888.3	RefSeq	gene	2176826	2177557	.	-	.	ID=gene2028;Dbxref=GeneID:1097461;Name=SC3A3.05c;gbkey=Gene;gene=SC3A3.05c;gene_biotype=protein_coding;gene_synonym=SC3A3.05c;locus_tag=SCO2027
NC_003888.3	RefSeq	CDS	2176826	2177557	.	-	0	ID=cds1991;Parent=gene2028;Dbxref=Genbank:NP_626287.1,GeneID:1097461;Name=NP_626287.1;Note=SC3A3.05c%2C possible membrane protein%2C len: 243 aa%3B unknown function%2C shows weak similarity to TR:Q9ZUA5 (EMBL:AC006069) Arabidopsis thaliana hypothetical protein (250 aa)%2C fasta scores%3B opt: 347 z-score: 387.7 E(): 3e-14%2C 29.7%25 identity in 229 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC3A3.05c;product=hypothetical protein;protein_id=NP_626287.1;transl_table=11
NC_003888.3	RefSeq	gene	2177792	2179321	.	+	.	ID=gene2029;Dbxref=GeneID:1097462;Name=SC3A3.06;gbkey=Gene;gene=SC3A3.06;gene_biotype=protein_coding;gene_synonym=SC3A3.06;locus_tag=SCO2028
NC_003888.3	RefSeq	CDS	2177792	2179321	.	+	0	ID=cds1992;Parent=gene2029;Dbxref=Genbank:NP_626288.1,GeneID:1097462;Name=NP_626288.1;Note=SC3A3.06%2C possible membrane protein%2C len: 509 aa%3B unknown function%2C probable Ser- and Pro-rich CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains a compound repeat region at the C-terminus consisting of 22 degenerate repeats (19x RSPP(A/D)PD and 3x AHAPAPD). Shows weak similarity to the neighbouring CDS SC3A3.07%2C SC3A3.08 and SC3A3.09 e.g. SC3A3.07 hypothetical protein (425 aa) (32.1%25 identity in 383 aa overlap). Contains a hydrophobic%2C possible membrane-spanning region;gbkey=CDS;gene=SC3A3.06;product=hypothetical protein;protein_id=NP_626288.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2178833	2179294	.	+	.	ID=id2561;Dbxref=GeneID:1097462;Note=22x 21 bp direct repeats;gbkey=repeat_region;gene=SC3A3.06
NC_003888.3	RefSeq	gene	2179318	2180595	.	+	.	ID=gene2030;Dbxref=GeneID:1097463;Name=SC3A3.07;gbkey=Gene;gene=SC3A3.07;gene_biotype=protein_coding;gene_synonym=SC3A3.07;locus_tag=SCO2029
NC_003888.3	RefSeq	CDS	2179318	2180595	.	+	0	ID=cds1993;Parent=gene2030;Dbxref=Genbank:NP_626289.1,GeneID:1097463;Name=NP_626289.1;Note=SC3A3.07%2C hypothetical protein%2C len: 425 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Shows weak similarity to the neighbouring CDS SC3A3.06%2C SC3A3.08 and SC3A3.09 e.g. SC3A3.06 possible membrane protein (509 aa) (32.1%25 identity in 383 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC3A3.07;product=hypothetical protein;protein_id=NP_626289.1;transl_table=11
NC_003888.3	RefSeq	gene	2180592	2181770	.	+	.	ID=gene2031;Dbxref=GeneID:1097464;Name=SC3A3.08;gbkey=Gene;gene=SC3A3.08;gene_biotype=protein_coding;gene_synonym=SC3A3.08;locus_tag=SCO2030
NC_003888.3	RefSeq	CDS	2180592	2181770	.	+	0	ID=cds1994;Parent=gene2031;Dbxref=Genbank:NP_626290.1,GeneID:1097464;Name=NP_626290.1;Note=SC3A3.08%2C hypothetical protein%2C len: 392 aa%3B unknown function%2C shows very weak similarity to SW:YH24_ARCFU (EMBL:AE000984) Archaeoglobus fulgidus hypothetical protein (305 aa)%2C fasta scores%3B opt: 147 z-score: 168.3 E(): 0.051%2C 30.3%25 identity in 333 aa overlap. Shows weak similarity to the neighbouring CDS SC3A3.06%2C SC3A3.07 and SC3A3.09 e.g. SC3A3.06 possible membrane protein (509 aa) (33.1%25 identity in 393 aa overlap);gbkey=CDS;gene=SC3A3.08;product=hypothetical protein;protein_id=NP_626290.1;transl_table=11
NC_003888.3	RefSeq	gene	2181758	2183161	.	+	.	ID=gene2032;Dbxref=GeneID:1097465;Name=SC3A3.09;gbkey=Gene;gene=SC3A3.09;gene_biotype=protein_coding;gene_synonym=SC3A3.09;locus_tag=SCO2031
NC_003888.3	RefSeq	CDS	2181758	2183161	.	+	0	ID=cds1995;Parent=gene2032;Dbxref=Genbank:NP_626291.1,GeneID:1097465;Name=NP_626291.1;Note=SC3A3.09%2C hypothetical protein%2C len: 467 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Shows weak similarity to the neighbouring CDS SC3A3.06%2C SC3A3.07 and SC3A3.08 e.g. SC3A3.06 possible membrane protein (509 aa) (33.1%25 identity in 353 aa overlap). Has a Pro-rich C-terminus;gbkey=CDS;gene=SC3A3.09;product=hypothetical protein;protein_id=NP_626291.1;transl_table=11
NC_003888.3	RefSeq	gene	2183119	2184333	.	+	.	ID=gene2033;Dbxref=GeneID:1097466;Name=SC3A3.10;gbkey=Gene;gene=SC3A3.10;gene_biotype=protein_coding;gene_synonym=SC3A3.10,SC4G6.01;locus_tag=SCO2032
NC_003888.3	RefSeq	CDS	2183119	2184333	.	+	0	ID=cds1996;Parent=gene2033;Dbxref=Genbank:NP_626292.1,GeneID:1097466;Name=NP_626292.1;Note=SC4G6.01%2C partial CDS%2C unknown%2C len: >35 aa~SC3A3.10%2C hypothetical protein%2C len: 404 aa%3B unknown function%2C similar to both bacterial dehydratases e.g. SW:CAIB_ECOLI (EMBL:X67748) Escherichia coli L-carnitine dehydratase (405 aa)%2C fasta scores%3B opt: 579 z-score: 647.7 E(): 1e-28%2C 28.9%25 identity in 409 aa overlap and to eukaryotic isomerases e.g. TR:O43673 (EMBL:AF047020) Homo sapiens alpha-methylacyl-CoA racemase (382 aa) (31.2%25 identity in 398 aa overlap). Similar to others from S.coelicolor e.g. SC5F2A.13 (EMBL:AL049587) S.coelicolor possible racemase (398 aa) (35.9%25 identity in 404 aa overlap). Present%2C in part%2C in cosmid 4G6 (EMBL:AL096884) as SC4G6.01;gbkey=CDS;gene=SC3A3.10;product=hypothetical protein;protein_id=NP_626292.1;transl_table=11
NC_003888.3	RefSeq	gene	2184330	2185154	.	+	.	ID=gene2034;Dbxref=GeneID:1097467;Name=SC4G6.02;gbkey=Gene;gene=SC4G6.02;gene_biotype=protein_coding;gene_synonym=SC4G6.02;locus_tag=SCO2033
NC_003888.3	RefSeq	CDS	2184330	2185154	.	+	0	ID=cds1997;Parent=gene2034;Dbxref=Genbank:NP_626293.1,GeneID:1097467;Name=NP_626293.1;Note=SC4G6.02%2C possible citrate lyase beta chain%2C len: 274 aa%3B similar to SW:CILB_KLEPN citrate lyase beta chain from Klebsiella pneumoniae (289 aa) fasta scores%3B opt: 293%2C z-score: 325.3%2C E(): 8.5e-11%2C (33.5%25 identity in 284 aa overlap).;gbkey=CDS;gene=SC4G6.02;product=citrate lyase subunit beta;protein_id=NP_626293.1;transl_table=11
NC_003888.3	RefSeq	gene	2185228	2186259	.	-	.	ID=gene2035;Dbxref=GeneID:1097468;Name=SC4G6.03c;gbkey=Gene;gene=SC4G6.03c;gene_biotype=protein_coding;gene_synonym=SC4G6.03c;locus_tag=SCO2034
NC_003888.3	RefSeq	CDS	2185228	2186259	.	-	0	ID=cds1998;Parent=gene2035;Dbxref=Genbank:NP_626294.1,GeneID:1097468;Name=NP_626294.1;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;gbkey=CDS;gene=SC4G6.03c;product=prolipoprotein diacylglyceryl transferase;protein_id=NP_626294.1;transl_table=11
NC_003888.3	RefSeq	gene	2186336	2187163	.	-	.	ID=gene2036;Dbxref=GeneID:1097469;Name=SC4G6.04c;gbkey=Gene;gene=SC4G6.04c;gene_biotype=protein_coding;gene_synonym=SC4G6.04c;locus_tag=SCO2035
NC_003888.3	RefSeq	CDS	2186336	2187163	.	-	0	ID=cds1999;Parent=gene2036;Dbxref=Genbank:NP_626295.1,GeneID:1097469;Name=NP_626295.1;Note=SC4G6.04c%2C possible membrane protein%2C len: 275 aa%3B similar to TR:Q9S2S3 (EMBL:AL096884) Streptomyces coelicolor hypothetical protein SC4G6.36%2C 266 aa%3B fasta scores: opt: 519 Z-score: 588.1 E(): 4e-25%3B 34.470%25 identity in 264 aa overlap;gbkey=CDS;gene=SC4G6.04c;product=hypothetical protein;protein_id=NP_626295.1;transl_table=11
NC_003888.3	RefSeq	gene	2187211	2188026	.	-	.	ID=gene2037;Dbxref=GeneID:1097470;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;gene_synonym=SC4G6.05c;locus_tag=SCO2036
NC_003888.3	RefSeq	CDS	2187211	2188026	.	-	0	ID=cds2000;Parent=gene2037;Dbxref=Genbank:NP_626296.1,GeneID:1097470;Name=NP_626296.1;Note=catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis;gbkey=CDS;gene=trpA;product=tryptophan synthase subunit alpha;protein_id=NP_626296.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2187304	2187390	.	-	.	ID=id2562;Dbxref=GeneID:1097470;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=trpA
NC_003888.3	RefSeq	sequence_feature	2187307	2187963	.	-	.	ID=id2563;Dbxref=GeneID:1097470;Note=Pfam match to entry PF00290 trp_syntA%2C Tryptophan synthase alpha chain%2C score 270.60%2C E-value 2e-77.;gbkey=misc_feature;gene=trpA
NC_003888.3	RefSeq	gene	2188023	2189306	.	-	.	ID=gene2038;Dbxref=GeneID:1097471;Name=SC4G6.06c;gbkey=Gene;gene=SC4G6.06c;gene_biotype=protein_coding;gene_synonym=SC4G6.06c,trpB;locus_tag=SCO2037
NC_003888.3	RefSeq	CDS	2188023	2189306	.	-	0	ID=cds2001;Parent=gene2038;Dbxref=Genbank:NP_626297.1,GeneID:1097471;Name=NP_626297.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;gene=SC4G6.06c;product=tryptophan synthase subunit beta;protein_id=NP_626297.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2188098	2189246	.	-	.	ID=id2564;Dbxref=GeneID:1097471;Note=Pfam match to entry PF00247 trp_syntB%2C Tryptophan synthases%2C beta chain%2C score 931.10%2C E-value 3e-276.;gbkey=misc_feature;gene=SC4G6.06c
NC_003888.3	RefSeq	sequence_feature	2189001	2189030	.	-	.	ID=id2565;Dbxref=GeneID:1097471;Note=PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=SC4G6.06c
NC_003888.3	RefSeq	gene	2189421	2189612	.	-	.	ID=gene2039;Dbxref=GeneID:1097472;Name=SC4G6.07c;gbkey=Gene;gene=SC4G6.07c;gene_biotype=protein_coding;gene_synonym=SC4G6.07c;locus_tag=SCO2038
NC_003888.3	RefSeq	CDS	2189421	2189612	.	-	0	ID=cds2002;Parent=gene2039;Dbxref=Genbank:NP_626298.1,GeneID:1097472;Name=NP_626298.1;Note=SC4G6.07c%2C unknown%2C len: 63aa%3B previously sequenced therefore identical to TR:O68815 (EMBL:AF054585).;gbkey=CDS;gene=SC4G6.07c;product=hypothetical protein;protein_id=NP_626298.1;transl_table=11
NC_003888.3	RefSeq	gene	2189633	2190442	.	-	.	ID=gene2040;Dbxref=GeneID:1097473;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;gene_synonym=SC4G6.08c,trpC1;locus_tag=SCO2039
NC_003888.3	RefSeq	CDS	2189633	2190442	.	-	0	ID=cds2003;Parent=gene2040;Dbxref=Genbank:NP_626299.1,GeneID:1097473;Name=NP_626299.1;Note=involved in tryptophan biosynthesis%3B amino acid biosynthesis%3B converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water;gbkey=CDS;gene=trpC;product=indole-3-glycerol-phosphate synthase;protein_id=NP_626299.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2189678	2190436	.	-	.	ID=id2566;Dbxref=GeneID:1097473;Note=Pfam match to entry PF00218 IGPS%2C Indole-3-glycerol phosphate synthases%2C score 365.60%2C E-value 5.3e-106.;gbkey=misc_feature;gene=trpC
NC_003888.3	RefSeq	sequence_feature	2190248	2190292	.	-	.	ID=id2567;Dbxref=GeneID:1097473;Note=PS00614 Indole-3-glycerol phosphate synthase signature.;gbkey=misc_feature;gene=trpC
NC_003888.3	RefSeq	gene	2190560	2191006	.	-	.	ID=gene2041;Dbxref=GeneID:1097474;Name=SC4G6.09c;gbkey=Gene;gene=SC4G6.09c;gene_biotype=protein_coding;gene_synonym=SC4G6.09c;locus_tag=SCO2040
NC_003888.3	RefSeq	CDS	2190560	2191006	.	-	0	ID=cds2004;Parent=gene2041;Dbxref=Genbank:NP_626300.1,GeneID:1097474;Name=NP_626300.1;Note=SC4G6.09c%2C possible membrane protein%2C len: aa%3B similar to TR:O06133 (EMBL:Z95554) hypothetical protein from Mycobacterium tuberculosis (132 aa) fasta scores%3B opt: 245%2C z-score: 301.1%2C E(): 1.9e-09%2C (36.7%25 identity in 128 aa overlap). Contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SC4G6.09c;product=hypothetical protein;protein_id=NP_626300.1;transl_table=11
NC_003888.3	RefSeq	gene	2191109	2191360	.	-	.	ID=gene2042;Dbxref=GeneID:1097475;Name=SC4G6.10c;gbkey=Gene;gene=SC4G6.10c;gene_biotype=protein_coding;gene_synonym=SC4G6.10c;locus_tag=SCO2041
NC_003888.3	RefSeq	CDS	2191109	2191360	.	-	0	ID=cds2005;Parent=gene2042;Dbxref=Genbank:NP_626301.1,GeneID:1097475;Name=NP_626301.1;Note=SC4G6.10c%2C possible membrane protein%2C len: 83aa%3B Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC4G6.10c;product=hypothetical protein;protein_id=NP_626301.1;transl_table=11
NC_003888.3	RefSeq	gene	2191505	2192140	.	-	.	ID=gene2043;Dbxref=GeneID:1097476;Name=SC4G6.11c;gbkey=Gene;gene=SC4G6.11c;gene_biotype=protein_coding;gene_synonym=SC4G6.11c;locus_tag=SCO2042
NC_003888.3	RefSeq	CDS	2191505	2192140	.	-	0	ID=cds2006;Parent=gene2043;Dbxref=Genbank:NP_626302.1,GeneID:1097476;Name=NP_626302.1;Note=SC4G6.11c%2C possible membrane protein%2C len: 211aa%3B similar to TR:O06128 (EMBL:Z95554) hypothetical protein from Mycobacterium tuberculosis (235 aa) fasta scores%3B opt: 155%2C z-score: 174.0%2C E(): 0.023%2C (29.9%25 identity in 224 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC4G6.11c;product=hypothetical protein;protein_id=NP_626302.1;transl_table=11
NC_003888.3	RefSeq	gene	2192224	2193732	.	-	.	ID=gene2044;Dbxref=GeneID:1097477;Name=SC4G6.12c;gbkey=Gene;gene=SC4G6.12c;gene_biotype=protein_coding;gene_synonym=SC4G6.12c,trpE3;locus_tag=SCO2043
NC_003888.3	RefSeq	CDS	2192224	2193732	.	-	0	ID=cds2007;Parent=gene2044;Dbxref=Genbank:NP_626303.1,GeneID:1097477;Name=NP_626303.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;gene=SC4G6.12c;product=anthranilate synthase component I;protein_id=NP_626303.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2192251	2193039	.	-	.	ID=id2568;Dbxref=GeneID:1097477;Note=Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme%2C score 533.90%2C E-value 1.1e-156.;gbkey=misc_feature;gene=SC4G6.12c
NC_003888.3	RefSeq	gene	2193744	2194130	.	-	.	ID=gene2045;Dbxref=GeneID:1097478;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;gene_synonym=SC4G6.13c;locus_tag=SCO2044
NC_003888.3	RefSeq	CDS	2193744	2194130	.	-	0	ID=cds2008;Parent=gene2045;Dbxref=Genbank:NP_626304.1,GeneID:1097478;Name=NP_626304.1;Note=PR-AMP cyclohydrolase%3B functions in histidine biosynthesis from PRPP%3B converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxyamide during the histidine biosynthesis pathway%3B binds zinc and magnesium%3B forms homodimers;gbkey=CDS;gene=hisI;product=phosphoribosyl-AMP cyclohydrolase;protein_id=NP_626304.1;transl_table=11
NC_003888.3	RefSeq	gene	2194212	2194847	.	+	.	ID=gene2046;Dbxref=GeneID:1097479;Name=SC4G6.14;gbkey=Gene;gene=SC4G6.14;gene_biotype=protein_coding;gene_synonym=SC4G6.14;locus_tag=SCO2045
NC_003888.3	RefSeq	CDS	2194212	2194847	.	+	0	ID=cds2009;Parent=gene2046;Dbxref=Genbank:NP_626305.1,GeneID:1097479;Name=NP_626305.1;Note=SC4G6.14%2C unknown%2C len: 211aa%3B similar to TR:P95285 (EMBL:Z84498) hypothetical protein from Mycobacterium tuberculosis (214 aa) fasta scores%3B opt: 416%2C z-score: 500.9%2C E(): 1.4e-20%2C (39.8%25 identity in 206 aa overlap).;gbkey=CDS;gene=SC4G6.14;product=hypothetical protein;protein_id=NP_626305.1;transl_table=11
NC_003888.3	RefSeq	gene	2194858	2196012	.	-	.	ID=gene2047;Dbxref=GeneID:1097480;Name=SC4G6.15c;gbkey=Gene;gene=SC4G6.15c;gene_biotype=protein_coding;gene_synonym=SC4G6.15c;locus_tag=SCO2046
NC_003888.3	RefSeq	CDS	2194858	2196012	.	-	0	ID=cds2010;Parent=gene2047;Dbxref=Genbank:NP_626306.1,GeneID:1097480;Name=NP_626306.1;Note=SC4G6.15c%2C possible integral membrane efflux protein%2C len: 384aa%3B similar to many egs. TR:O31137 (EMBL:AF030344) TetV%2C tetracycline resistance determinant from Mycobacterium smegmatis (419 aa) fasta scores%3B opt: 446%2C z-score: 465.6%2C E(): 1.3e-18%2C (27.3%25 identity in 381 aa overlap) and TR:CAB41206 (EMBL:AL049661) integral membrane efflux protein from Streptomyces coelicolor (500 aa) fasta scores%3B opt: 416%2C z-score: 433.8%2C E(): 7.7e-17%2C (32.8%25 identity in 375 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC4G6.15c;product=integral membrane efflux protein;protein_id=NP_626306.1;transl_table=11
NC_003888.3	RefSeq	gene	2196122	2196709	.	-	.	ID=gene2048;Dbxref=GeneID:1097481;Name=SC4G6.16c;gbkey=Gene;gene=SC4G6.16c;gene_biotype=protein_coding;gene_synonym=SC4G6.16c;locus_tag=SCO2047
NC_003888.3	RefSeq	CDS	2196122	2196709	.	-	0	ID=cds2011;Parent=gene2048;Dbxref=Genbank:NP_626307.1,GeneID:1097481;Name=NP_626307.1;Note=SC4G6.16c%2C possible DNA-binding protein%2C len: 195aa%3B contains helix-turn-helix motif (+3.18 SD) 37-58aa.;gbkey=CDS;gene=SC4G6.16c;product=DNA-binding protein;protein_id=NP_626307.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	2196728	2196769	.	+	.	ID=id2569;Note=perfect inverted repeat with 6 base potential loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2196793	2197548	.	-	.	ID=gene2049;Dbxref=GeneID:1097482;Name=SC4G6.17c;gbkey=Gene;gene=SC4G6.17c;gene_biotype=protein_coding;gene_synonym=SC4G6.17c;locus_tag=SCO2048
NC_003888.3	RefSeq	CDS	2196793	2197548	.	-	0	ID=cds2012;Parent=gene2049;Dbxref=Genbank:NP_626308.1,GeneID:1097482;Name=NP_626308.1;Note=catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamideribonucleotide and glutamate%3B the HisF subunit acts as a cyclase;gbkey=CDS;gene=SC4G6.17c;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=NP_626308.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2196820	2197536	.	-	.	ID=id2570;Dbxref=GeneID:1097482;Note=Pfam match to entry PF00977 His_biosynth%2C Histidine biosynthesis protein%2C score 420.50%2C E-value 1.5e-122.;gbkey=misc_feature;gene=SC4G6.17c
NC_003888.3	RefSeq	gene	2197545	2197949	.	-	.	ID=gene2050;Dbxref=GeneID:1097483;Name=SC4G6.18c;gbkey=Gene;gene=SC4G6.18c;gene_biotype=protein_coding;gene_synonym=SC4G6.18c;locus_tag=SCO2049
NC_003888.3	RefSeq	CDS	2197545	2197949	.	-	0	ID=cds2013;Parent=gene2050;Dbxref=Genbank:NP_626309.1,GeneID:1097483;Name=NP_626309.1;Note=SC4G6.18c%2C conserved hypothetical protein%2C len: 134aa%3B previously sequenced therefore almost identical to SW:YHI2_STRCO. Also similar to many others eg. TR:O07205 (EMBL:Z96072) hypothetical protein from Mycobacterium tuberculosis (142 aa) fasta scores%3B opt: 225%2C z-score: 300.2%2C E(): 2.1e-09%2C (34.1%25 identity in 123 aa overlap).;gbkey=CDS;gene=SC4G6.18c;product=hypothetical protein;protein_id=NP_626309.1;transl_table=11
NC_003888.3	RefSeq	gene	2197966	2198688	.	-	.	ID=gene2051;Dbxref=GeneID:1097484;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;gene_synonym=hisA,SC4G6.19c;locus_tag=SCO2050
NC_003888.3	RefSeq	CDS	2197966	2198688	.	-	0	ID=cds2014;Parent=gene2051;Dbxref=Genbank:NP_626310.1,GeneID:1097484;Name=NP_626310.1;Note=catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate%3B involved in histidine and tryptophan biosynthesis;gbkey=CDS;gene=hisA;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=NP_626310.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2197972	2198679	.	-	.	ID=id2571;Dbxref=GeneID:1097484;Note=Pfam match to entry PF00977 His_biosynth%2C Histidine biosynthesis protein%2C score 170.10%2C E-value 3.7e-47.;gbkey=misc_feature;gene=hisA
NC_003888.3	RefSeq	gene	2198706	2199374	.	-	.	ID=gene2052;Dbxref=GeneID:1097485;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;gene_synonym=SC4G6.20c;locus_tag=SCO2051
NC_003888.3	RefSeq	CDS	2198706	2199374	.	-	0	ID=cds2015;Parent=gene2052;Dbxref=Genbank:NP_626311.1,GeneID:1097485;Name=NP_626311.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=NP_626311.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2198712	2199332	.	-	.	ID=id2572;Dbxref=GeneID:1097485;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 168.00%2C E-value 1.5e-46.;gbkey=misc_feature;gene=hisH
NC_003888.3	RefSeq	sequence_feature	2199078	2199113	.	-	.	ID=id2573;Dbxref=GeneID:1097485;Note=PS00442 Glutamine amidotransferases class-I active site.;gbkey=misc_feature;gene=hisH
NC_003888.3	RefSeq	gene	2199539	2200132	.	-	.	ID=gene2053;Dbxref=GeneID:1097486;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;gene_synonym=SC4G6.21c;locus_tag=SCO2052
NC_003888.3	RefSeq	CDS	2199539	2200132	.	-	0	ID=cds2016;Parent=gene2053;Dbxref=Genbank:NP_626312.1,GeneID:1097486;Name=NP_626312.1;Note=catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis;gbkey=CDS;gene=hisB;product=imidazoleglycerol-phosphate dehydratase;protein_id=NP_626312.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2199602	2200039	.	-	.	ID=id2574;Dbxref=GeneID:1097486;Note=Pfam match to entry PF00475 IGPD%2C Imidazoleglycerol-phosphate dehydratase%2C score 369.00%2C E-value 6.2e-126.;gbkey=misc_feature;gene=hisB
NC_003888.3	RefSeq	sequence_feature	2199623	2199661	.	-	.	ID=id2575;Dbxref=GeneID:1097486;Note=PS00955 Imidazoleglycerol-phosphate dehydratase signature 2.;gbkey=misc_feature;gene=hisB
NC_003888.3	RefSeq	sequence_feature	2199908	2199949	.	-	.	ID=id2576;Dbxref=GeneID:1097486;Note=PS00954 Imidazoleglycerol-phosphate dehydratase signature 1.;gbkey=misc_feature;gene=hisB
NC_003888.3	RefSeq	gene	2200129	2201238	.	-	.	ID=gene2054;Dbxref=GeneID:1097487;Name=hisC1;gbkey=Gene;gene=hisC1;gene_biotype=protein_coding;gene_synonym=hisC1,SC4G6.22c;locus_tag=SCO2053
NC_003888.3	RefSeq	CDS	2200129	2201238	.	-	0	ID=cds2017;Parent=gene2054;Dbxref=Genbank:NP_626313.1,GeneID:1097487;Name=NP_626313.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;gene=hisC1;product=histidinol-phosphate aminotransferase;protein_id=NP_626313.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2200207	2200986	.	-	.	ID=id2577;Dbxref=GeneID:1097487;Note=Pfam match to entry PF00222 aminotran_2%2C Aminotransferases class-II%2C score 335.40%2C E-value 6.6e-97.;gbkey=misc_feature;gene=hisC1
NC_003888.3	RefSeq	sequence_feature	2200531	2200560	.	-	.	ID=id2578;Dbxref=GeneID:1097487;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=hisC1
NC_003888.3	RefSeq	gene	2201235	2202560	.	-	.	ID=gene2055;Dbxref=GeneID:1097488;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;gene_synonym=SC4G6.23c;locus_tag=SCO2054
NC_003888.3	RefSeq	CDS	2201235	2202560	.	-	0	ID=cds2018;Parent=gene2055;Dbxref=Genbank:NP_626314.1,GeneID:1097488;Name=NP_626314.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=NP_626314.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2201259	2202509	.	-	.	ID=id2579;Dbxref=GeneID:1097488;Note=Pfam match to entry PF00815 Histidinol_dh%2C Histidinol dehydrogenase%2C score 880.70%2C E-value 4.4e-261.;gbkey=misc_feature;gene=hisD
NC_003888.3	RefSeq	sequence_feature	2201766	2201864	.	-	.	ID=id2580;Dbxref=GeneID:1097488;Note=PS00611 Histidinol dehydrogenase signature.;gbkey=misc_feature;gene=hisD
NC_003888.3	RefSeq	gene	2202760	2204337	.	+	.	ID=gene2056;Dbxref=GeneID:1097489;Name=SC4G6.24;gbkey=Gene;gene=SC4G6.24;gene_biotype=protein_coding;gene_synonym=SC4G6.24;locus_tag=SCO2055
NC_003888.3	RefSeq	CDS	2202760	2204337	.	+	0	ID=cds2019;Parent=gene2056;Dbxref=Genbank:NP_626315.1,GeneID:1097489;Name=NP_626315.1;Note=SC4G6.24%2C unknown%2C len: 525 aa%3B previously sequenced but annotated as two seperate hypothetical CDSs TR:Q53930 and TR:Q53931 (EMBL:X64420)) suggesting a sequence error which lead to a frameshift. Amino acid and codon usage plots support a single CDS. Also similar to TR:O88013 (EMBL:AL031107) hypothetical protein from Streptomyces coelicolor (527 aa) fasta scores%3B opt: 593%2C z-score: 699.2%2C E(): 1.3e-31%2C (36.0%25 identity in 545 aa overlap). Contains possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=SC4G6.24;product=hypothetical protein;protein_id=NP_626315.1;transl_table=11
NC_003888.3	RefSeq	gene	2204605	2205735	.	+	.	ID=gene2057;Dbxref=GeneID:1097490;Name=SC4G6.25;gbkey=Gene;gene=SC4G6.25;gene_biotype=protein_coding;gene_synonym=SC4G6.25;locus_tag=SCO2056
NC_003888.3	RefSeq	CDS	2204605	2205735	.	+	0	ID=cds2020;Parent=gene2057;Dbxref=Genbank:NP_626316.1,GeneID:1097490;Name=NP_626316.1;Note=SC4G6.25%2C unknown%2C len: 376aa;gbkey=CDS;gene=SC4G6.25;product=hypothetical protein;protein_id=NP_626316.1;transl_table=11
NC_003888.3	RefSeq	gene	2205747	2206487	.	+	.	ID=gene2058;Dbxref=GeneID:1097491;Name=SC4G6.26;gbkey=Gene;gene=SC4G6.26;gene_biotype=protein_coding;gene_synonym=SC4G6.26;locus_tag=SCO2057
NC_003888.3	RefSeq	CDS	2205747	2206487	.	+	0	ID=cds2021;Parent=gene2058;Dbxref=Genbank:NP_626317.1,GeneID:1097491;Name=NP_626317.1;Note=SC4G6.26%2C unknown%2C len: 246 aa%3B similar to TR:Q55701 (EMBL:D64000) hypothetical protein from Synechocystis sp. strain PCC6803 (214 aa) fasta scores%3B opt: 158%2C z-score: 192.8%2C E(): 0.0021%2C (32.6%25 identity in 224 aa overlap). Also some simliarity to the N-terminal region of many ATP-dependent proteases eg. SW:LON_ECOLI Lon protease from Escherichia coli (784 aa) fasta scores%3B opt: 152%2C z-score: 176.8%2C E(): 0.016%2C (24.6%25 identity in 228 aa overlap).;gbkey=CDS;gene=SC4G6.26;product=hypothetical protein;protein_id=NP_626317.1;transl_table=11
NC_003888.3	RefSeq	gene	2206501	2207010	.	+	.	ID=gene2059;Dbxref=GeneID:1097492;Name=SC4G6.27;gbkey=Gene;gene=SC4G6.27;gene_biotype=protein_coding;gene_synonym=SC4G6.27;locus_tag=SCO2058
NC_003888.3	RefSeq	CDS	2206501	2207010	.	+	0	ID=cds2022;Parent=gene2059;Dbxref=Genbank:NP_626318.1,GeneID:1097492;Name=NP_626318.1;Note=SC4G6.27%2C possible transcriptional regulatory protein%2C len: 169 aa%3B similar to many e.g. TR:Q51388 (EMBL:U49666) proposed regulatory protein from the glycerol metabolism cluster in Pseudomonas aeruginosa (156 aa) fasta scores%3B opt: 546%2C z-score: 627.8%2C E(): 1.2e-27%2C (59.7%25 identity in 154 aa overlap). Contains possible helix-turn-helix motif (+2.63 SD) 43-64 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4G6.27;product=transcriptional regulator;protein_id=NP_626318.1;transl_table=11
NC_003888.3	RefSeq	gene	2207142	2207858	.	-	.	ID=gene2060;Dbxref=GeneID:1097493;Name=SC4G6.28c;gbkey=Gene;gene=SC4G6.28c;gene_biotype=protein_coding;gene_synonym=SC4G6.28c;locus_tag=SCO2059
NC_003888.3	RefSeq	CDS	2207142	2207858	.	-	0	ID=cds2023;Parent=gene2060;Dbxref=Genbank:NP_626319.1,GeneID:1097493;Name=NP_626319.1;Note=SC4G6.28c%2C possible membrane protein%2C len: 238aa%3B Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC4G6.28c;product=hypothetical protein;protein_id=NP_626319.1;transl_table=11
NC_003888.3	RefSeq	gene	2207893	2208813	.	-	.	ID=gene2061;Dbxref=GeneID:1097494;Name=SC4G6.29c;gbkey=Gene;gene=SC4G6.29c;gene_biotype=protein_coding;gene_synonym=SC4G6.29c;locus_tag=SCO2060
NC_003888.3	RefSeq	CDS	2207893	2208813	.	-	0	ID=cds2024;Parent=gene2061;Dbxref=Genbank:NP_626320.1,GeneID:1097494;Name=NP_626320.1;Note=SC4G6.29c%2C possible integral membrane transport protein%2C len: 306aa%3B weakly similar to many eg. TR:CAB42664 (EMBL:AL049819)  integral membrane protein from Streptomyces coelicolor (266 aa) fasta scores%3B opt: 163%2C z-score: 184.2%2C E(): 0.0061%2C (25.3%25 identity in 273 aa overlap). Contains possible membrane spanning hydrophobic regions. Location directly downstream of a possible ABC transport ATP-binding protein sueggsts a transport function.;gbkey=CDS;gene=SC4G6.29c;product=integral membrane transport protein;protein_id=NP_626320.1;transl_table=11
NC_003888.3	RefSeq	gene	2208825	2209799	.	-	.	ID=gene2062;Dbxref=GeneID:1097495;Name=SC4G6.30c;gbkey=Gene;gene=SC4G6.30c;gene_biotype=protein_coding;gene_synonym=SC4G6.30c;locus_tag=SCO2061
NC_003888.3	RefSeq	CDS	2208825	2209799	.	-	0	ID=cds2025;Parent=gene2062;Dbxref=Genbank:NP_626321.1,GeneID:1097495;Name=NP_626321.1;Note=SC4G6.30c%2C possible ABC transport ATP-binding subunit%2C len: 324aa%3B similar to many eg. TR:Q53716 (EMBL:L06249) ATP-binding protein from Streptomyces antibioticus (325 aa) fasta scores%3B opt: 611%2C z-score: 658.7%2C E(): 2.3e-29%2C (39.4%25 identity in 310 aa overlap). Also similar to TR:CAB42771 (EMBL:AL049841) from Streptomyces coelicolor (315 aa) fasta scores%3B opt: 599%2C z-score: 646.2%2C E(): 1.1e-28%2C (40.9%25 identity in 291 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC4G6.30c;product=ABC transport ATP-binding subunit;protein_id=NP_626321.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2209137	2209685	.	-	.	ID=id2581;Dbxref=GeneID:1097495;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 173.00%2C E-value 4.8e-48.;gbkey=misc_feature;gene=SC4G6.30c
NC_003888.3	RefSeq	sequence_feature	2209323	2209367	.	-	.	ID=id2582;Dbxref=GeneID:1097495;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC4G6.30c
NC_003888.3	RefSeq	sequence_feature	2209641	2209664	.	-	.	ID=id2583;Dbxref=GeneID:1097495;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC4G6.30c
NC_003888.3	RefSeq	gene	2209967	2211178	.	-	.	ID=gene2063;Dbxref=GeneID:1097496;Name=SC4G6.31c;gbkey=Gene;gene=SC4G6.31c;gene_biotype=protein_coding;gene_synonym=SC4G6.31c;locus_tag=SCO2062
NC_003888.3	RefSeq	CDS	2209967	2211178	.	-	0	ID=cds2026;Parent=gene2063;Dbxref=Genbank:NP_626322.1,GeneID:1097496;Name=NP_626322.1;Note=SC4G6.31c%2C unknown%2C len: 403aa;gbkey=CDS;gene=SC4G6.31c;product=hypothetical protein;protein_id=NP_626322.1;transl_table=11
NC_003888.3	RefSeq	gene	2211403	2211570	.	+	.	ID=gene2064;Dbxref=GeneID:1097497;Name=SC4G6.32;gbkey=Gene;gene=SC4G6.32;gene_biotype=protein_coding;gene_synonym=SC4G6.32;locus_tag=SCO2063
NC_003888.3	RefSeq	CDS	2211403	2211570	.	+	0	ID=cds2027;Parent=gene2064;Dbxref=Genbank:NP_626323.1,GeneID:1097497;Name=NP_626323.1;Note=SC4G6.32%2C possible small hydrophilic protein%2C len: 55 aa;gbkey=CDS;gene=SC4G6.32;product=small hydrophilic protein;protein_id=NP_626323.1;transl_table=11
NC_003888.3	RefSeq	gene	2211637	2215176	.	-	.	ID=gene2065;Dbxref=GeneID:1097498;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;gene_synonym=SC4G6.33c;locus_tag=SCO2064
NC_003888.3	RefSeq	CDS	2211637	2215176	.	-	0	ID=cds2028;Parent=gene2065;Dbxref=Genbank:NP_626324.1,GeneID:1097498;Name=NP_626324.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=NP_626324.1;transl_table=11
NC_003888.3	RefSeq	gene	2215379	2216719	.	+	.	ID=gene2066;Dbxref=GeneID:1097499;Name=SC4G6.34;gbkey=Gene;gene=SC4G6.34;gene_biotype=protein_coding;gene_synonym=SC4G6.34;locus_tag=SCO2065
NC_003888.3	RefSeq	CDS	2215379	2216719	.	+	0	ID=cds2029;Parent=gene2066;Dbxref=Genbank:NP_626325.1,GeneID:1097499;Name=NP_626325.1;Note=SC4G6.34%2C unknown%2C len: 446 aa%3B weakly similar to two other hypothetical proteins from Streptomyces coelicolor%3B TR:CAB45208 (EMBL:AL079308) (509 aa) fasta scores%3B opt: 382%2C z-score: 443.7%2C E(): 2.2e-17%2C (33.3%25 identity in 448 aa overlap) and TR:O86499 (EMBL:AL031232) (469 aa) fasta scores%3B opt: 222%2C z-score: 259.2%2C E(): 4.1e-07%2C (27.7%25 identity in 437 aa overlap);gbkey=CDS;gene=SC4G6.34;product=hypothetical protein;protein_id=NP_626325.1;transl_table=11
NC_003888.3	RefSeq	gene	2216806	2217516	.	+	.	ID=gene2067;Dbxref=GeneID:1097500;Name=SC4G6.35;gbkey=Gene;gene=SC4G6.35;gene_biotype=protein_coding;gene_synonym=SC4G6.35;locus_tag=SCO2066
NC_003888.3	RefSeq	CDS	2216806	2217516	.	+	0	ID=cds2030;Parent=gene2067;Dbxref=Genbank:NP_626326.1,GeneID:1097500;Name=NP_626326.1;Note=SC4G6.35%2C possible membrane protein%2C len: 236aa%3B Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC4G6.35;product=hypothetical protein;protein_id=NP_626326.1;transl_table=11
NC_003888.3	RefSeq	gene	2217614	2218414	.	+	.	ID=gene2068;Dbxref=GeneID:1097501;Name=SC4G6.36;gbkey=Gene;gene=SC4G6.36;gene_biotype=protein_coding;gene_synonym=SC4G6.36;locus_tag=SCO2067
NC_003888.3	RefSeq	CDS	2217614	2218414	.	+	0	ID=cds2031;Parent=gene2068;Dbxref=Genbank:NP_626327.1,GeneID:1097501;Name=NP_626327.1;Note=SC4G6.36%2C membrane protein%2C len: 266 aa%3B weakly similar to TR:O69463 (EMBL:AL023635) hypothetical protein from Mycobacterium leprae (258 aa) fasta scores%3B opt: 250%2C z-score: 277.4%2C E(): 4e-08%2C (27.2%25 identity in 250 aa overlap) and similar to TR:Q9S2U7 (EMBL:AL096884) Streptomyces coelicolor integral membrane protein SC4G6.04c%2C 275 aa%3B fasta scores: opt: 519 Z-score: 568.5 E(): 4.9e-24%3B 34.470%25 identity in 264 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4G6.36;product=hypothetical protein;protein_id=NP_626327.1;transl_table=11
NC_003888.3	RefSeq	gene	2218545	2220200	.	+	.	ID=gene2069;Dbxref=GeneID:1097502;Name=SC4A10.01;gbkey=Gene;gene=SC4A10.01;gene_biotype=protein_coding;gene_synonym=SC4A10.01,SC4G6.37;locus_tag=SCO2068
NC_003888.3	RefSeq	CDS	2218545	2220200	.	+	0	ID=cds2032;Parent=gene2069;Dbxref=Genbank:NP_733556.1,GeneID:1097502;Name=NP_733556.1;Note=SC4A10.01%2C hypothetical protein%2C partial CDS%2C len: >67 aa%3B unknown function%2C probable CDS suggested by GC frameplot and positional base preference. Continues in cosmid 4G6 as SC4G6.39~SC4G6.37%2C possible  alkaline phosphatase%2C len: >517aa%3B similar to SW:PPBD_BACSU alkaline phosphatase D from Bacillus subtilis (556 aa) fasta scores%3B opt: 837%2C z-score: 915.3%2C E(): 0%2C (34.3%25 identity in 539 aa overlap). Contains possible N-terminal region signal sequence peptide;gbkey=CDS;gene=SC4A10.01;product=alkaline phosphatase;protein_id=NP_733556.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2219996	2220097	.	+	.	ID=id2584;Dbxref=GeneID:1097502;Note=overlap with Streptomyces coelicolor cosmid 4G6;gbkey=misc_feature;gene=SC4A10.01
NC_003888.3	RefSeq	sequence_feature	2219996	2220096	.	+	.	ID=id2585;Dbxref=GeneID:1097502;Note=Overlap with Streptomyces coelicolor cosmid 4A10.;gbkey=misc_feature;gene=SC4A10.01
NC_003888.3	RefSeq	gene	2220185	2220775	.	-	.	ID=gene2070;Dbxref=GeneID:1097503;Name=SC4A10.02c;gbkey=Gene;gene=SC4A10.02c;gene_biotype=protein_coding;gene_synonym=SC4A10.02c;locus_tag=SCO2069
NC_003888.3	RefSeq	CDS	2220185	2220775	.	-	0	ID=cds2033;Parent=gene2070;Dbxref=Genbank:NP_626328.1,GeneID:1097503;Name=NP_626328.1;Note=SC4A10.02c%2C hypothetical protein%2C len: 196 aa%3B similar to the plasmid borne TR:CAC48425 (EMBL:AL603642) Rhizobium meliloti (Sinorhizobium meliloti) conserved hypothetical protein SMB20022%2C 188 aa%3B fasta scores: opt: 485 Z-score: 576.0 E(): 1.9e-24%3B 45.198%25 identity in 177 aa overlap. Probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Annotated in cosmid 4G6 as SC4G6.38c;gbkey=CDS;gene=SC4A10.02c;product=hypothetical protein;protein_id=NP_626328.1;transl_table=11
NC_003888.3	RefSeq	gene	2220881	2222029	.	+	.	ID=gene2071;Dbxref=GeneID:1097504;Name=SC4A10.03;gbkey=Gene;gene=SC4A10.03;gene_biotype=protein_coding;gene_synonym=SC4A10.03;locus_tag=SCO2070
NC_003888.3	RefSeq	CDS	2220881	2222029	.	+	0	ID=cds2034;Parent=gene2071;Dbxref=Genbank:NP_626329.1,GeneID:1097504;Name=NP_626329.1;Note=SC4A10.03%2C possible membrane protein%2C len: 382 aa%3B unknown function%2C shows weak similarity to parts of many hypothetical proteins e.g. SW:YB43_METJA (EMBL:U67556) Methanococcus jannaschii hypothetical protein (361 aa)%2C fasta scores%3B opt: 222 z-score: 255.3 E(): 6.7e-07%2C 24.8%25 identity in 306 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF00924 UPF0003%2C Uncharacterized protein family UPF0003;gbkey=CDS;gene=SC4A10.03;product=hypothetical protein;protein_id=NP_626329.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2221130	2221876	.	+	.	ID=id2586;Dbxref=GeneID:1097504;Note=Pfam match to entry PF00924 UPF0003%2C Uncharacterized protein family UPF0003%2C score 15.70%2C E-value 9.1e-09;gbkey=misc_feature;gene=SC4A10.03
NC_003888.3	RefSeq	gene	2222051	2223637	.	-	.	ID=gene2072;Dbxref=GeneID:1097505;Name=SC4A10.04c;gbkey=Gene;gene=SC4A10.04c;gene_biotype=protein_coding;gene_synonym=SC4A10.04c;locus_tag=SCO2071
NC_003888.3	RefSeq	CDS	2222051	2223637	.	-	0	ID=cds2035;Parent=gene2072;Dbxref=Genbank:NP_626330.1,GeneID:1097505;Name=NP_626330.1;Note=SC4A10.04c%2C possible Na+/H+ antiporter%2C len: 528 aa%3B shows weak similarity to the N-terminal portion of eukaryotic Na+/H+ antiporters e.g. SW:NAH3_RAT (EMBL:M85300) Rattus norvegicus sodium/hydrogen exchanger 3 (831 aa)%2C fasta scores%3B opt: 271 z-score: 293.1 E(): 5.3e-09%2C 25.8%25 identity in 481 aa overlap. Similar to many Na+/H+ antiporters e.g. SW:YU23_MYCTU (EMBL:Z77163) Mycobacterium tuberculosis  Na(+)/H(+) exchanger (542 aa) (31.4%25 identity in 528 aa overlap). Shows weak similarity to SC66T3.14c (EMBL:AL079348) S.coelicolor probable Na(+)/H(+) antiporter (514 aa) (27.5%25 identity in 545 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF00999 Na_H_Exchanger%2C Sodium/hydrogen exchanger family;gbkey=CDS;gene=SC4A10.04c;product=Na+/H+ antiporter;protein_id=NP_626330.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2222405	2223628	.	-	.	ID=id2587;Dbxref=GeneID:1097505;Note=Pfam match to entry PF00999 Na_H_Exchanger%2C Sodium/hydrogen exchanger family%2C score 258.90%2C E-value 6.7e-74;gbkey=misc_feature;gene=SC4A10.04c
NC_003888.3	RefSeq	gene	2223726	2224208	.	-	.	ID=gene2073;Dbxref=GeneID:1097506;Name=SC4A10.05c;gbkey=Gene;gene=SC4A10.05c;gene_biotype=protein_coding;gene_synonym=SC4A10.05c;locus_tag=SCO2072
NC_003888.3	RefSeq	CDS	2223726	2224208	.	-	0	ID=cds2036;Parent=gene2073;Dbxref=Genbank:NP_626331.1,GeneID:1097506;Name=NP_626331.1;Note=SC4A10.05c%2C hypothetical protein%2C len: 160 aa%3B unknown function%2C shows weak similarity to hypothetical proteins from other eubacteria e.g. SW:YYBD_BACSU (EMBL:D26185) Bacillus subtilis hypothetical protein (147 aa)%2C fasta scores%3B opt: 199 z-score: 236.4 E(): 7.6e-06%2C 36.8%25 identity in 144 aa overlap. Shows weak similarity to SC5F7.12c (EMBL:AL096872) S.coelicolor possible acetyltransferase (169 aa) (37.7%25 identity in 114 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC4A10.05c;product=hypothetical protein;protein_id=NP_626331.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2223789	2224178	.	-	.	ID=id2588;Dbxref=GeneID:1097506;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 60.20%2C E-value 4.6e-14;gbkey=misc_feature;gene=SC4A10.05c
NC_003888.3	RefSeq	gene	2224211	2225155	.	-	.	ID=gene2074;Dbxref=GeneID:1097507;Name=SC4A10.06c;gbkey=Gene;gene=SC4A10.06c;gene_biotype=protein_coding;gene_synonym=SC4A10.06c;locus_tag=SCO2073
NC_003888.3	RefSeq	CDS	2224211	2225155	.	-	0	ID=cds2037;Parent=gene2074;Dbxref=Genbank:NP_626332.1,GeneID:1097507;Name=NP_626332.1;Note=SC4A10.06c%2C possible ribosomal large subunit pseudouridine synthase%2C len: 314 aa%3B similar to many e.g. SW:RLUC_ECOLI (EMBL:AE000209)%2C RluC%2C Escherichia coli ribosomal large subunit pseudouridine synthase C%2C fasta scores%3B opt: 415 z-score: 467.2 E(): 1.1e-18%2C 30.1%25 identity in 326 aa overlap and SW:RLUD_ECOLI (EMBL:U50134)%2C RluD%2C Escherichia coli ribosomal large subunit pseudouridine synthase D (326 aa) (37.1%25 identity in 315 aa overlap). Highly similar to hypothetical proteins from mycobacteria e.g. MLCB458.15 (EMBL:AL049478)%2C RluC%2C Mycobacterium leprae possible pseudouridine synthase (308 aa) (64.3%25 identity in 305 aa overlap). Contains Pfam matches to entry PF01479 S4%2C S4 domain and to entry PF00849 YABO%2C Hypothetical yabO/yceC/sfhB family;gbkey=CDS;gene=SC4A10.06c;product=ribosomal large subunit pseudouridine synthase;protein_id=NP_626332.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2224406	2224894	.	-	.	ID=id2589;Dbxref=GeneID:1097507;Note=Pfam match to entry PF00849 YABO%2C Hypothetical yabO/yceC/sfhB family%2C score 234.80%2C E-value 1.2e-66;gbkey=misc_feature;gene=SC4A10.06c
NC_003888.3	RefSeq	sequence_feature	2224919	2225101	.	-	.	ID=id2590;Dbxref=GeneID:1097507;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 22.20%2C E-value 0.0019;gbkey=misc_feature;gene=SC4A10.06c
NC_003888.3	RefSeq	gene	2225281	2225895	.	-	.	ID=gene2075;Dbxref=GeneID:1097508;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;gene_synonym=SC4A10.07c;locus_tag=SCO2074
NC_003888.3	RefSeq	CDS	2225281	2225895	.	-	0	ID=cds2038;Parent=gene2075;Dbxref=Genbank:NP_626333.1,GeneID:1097508;Name=NP_626333.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=NP_626333.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2225296	2225751	.	-	.	ID=id2591;Dbxref=GeneID:1097508;Note=Pfam match to entry PF01252 Peptidase_A8%2C Signal peptidase (SPase) II%2C score 111.50%2C E-value 1.7e-29;gbkey=misc_feature;gene=lspA
NC_003888.3	RefSeq	gene	2225964	2226683	.	-	.	ID=gene2076;Dbxref=GeneID:1097509;Name=SC4A10.08c;gbkey=Gene;gene=SC4A10.08c;gene_biotype=protein_coding;gene_synonym=SC4A10.08c;locus_tag=SCO2075
NC_003888.3	RefSeq	CDS	2225964	2226683	.	-	0	ID=cds2039;Parent=gene2076;Dbxref=Genbank:NP_626334.1,GeneID:1097509;Name=NP_626334.1;Note=SC4A10.08c%2C probable DNA-binding protein%2C len: 239 aa%3B the N-terminus is Lys- and Ala-rich%2C containing 13 degenerate AAKK(S)(P/T) repeats and is similar to histone-like proteins e.g. SW:KARP_CHLTR (EMBL:M86605)%2C KarP%2C Chlamydia trachomatis developmentally regulated gene (207 aa)%2C fasta scores%3B opt: 245 z-score: 253.5 E(): 8.5e-07%2C 44.7%25 identity in 114 aa overlap. This region is also similar to a repeat in TR:O86537 (EMBL:AL031124) S.coelicolor histone-like DNA binding protein (218 aa) (51.4%25 identity in 72 aa overlap). The C-terminus is similar to SW:DKSA_ECOLI (EMBL:M34945)%2C DskA%2C Escherichia coli DnaK suppressor protein (151 aa) (28.8%25 identity in 125 aa overlap)%2C a dosage-dependent suppressor of dnaK deletion mutants. Contains probable coiled-coil from 123 to 159 (37 residues) (Max score: 1.709%2C probability 1.00). Contains Pfam match to entry PF01258 zf_dskA_traR%2C Prokaryotic dksA/traR C4-type zinc finger and PS01102 Prokaryotic dksA/traR C4-type zinc finger;gbkey=CDS;gene=SC4A10.08c;product=DNA-binding protein;protein_id=NP_626334.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2225967	2226167	.	-	.	ID=id2592;Dbxref=GeneID:1097509;Note=Pfam match to entry PF01258 zf_dskA_traR%2C Prokaryotic dksA/traR C4-type zinc finger%2C score 59.70%2C E-value 6.2e-14;gbkey=misc_feature;gene=SC4A10.08c
NC_003888.3	RefSeq	sequence_feature	2225991	2226065	.	-	.	ID=id2593;Dbxref=GeneID:1097509;Note=PS01102 Prokaryotic dksA/traR C4-type zinc finger;gbkey=misc_feature;gene=SC4A10.08c
NC_003888.3	RefSeq	repeat_region	2226483	2226677	.	-	.	ID=id2594;Dbxref=GeneID:1097509;Note=13x approx. 15 bp degenerate direct repeats;gbkey=repeat_region;gene=SC4A10.08c
NC_003888.3	RefSeq	gene	2227237	2230380	.	+	.	ID=gene2077;Dbxref=GeneID:1097510;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;gene_synonym=SC4A10.09;locus_tag=SCO2076
NC_003888.3	RefSeq	CDS	2227237	2230380	.	+	0	ID=cds2040;Parent=gene2077;Dbxref=Genbank:NP_626335.1,GeneID:1097510;Name=NP_626335.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 2 subfamily%3B some organisms carry two different copies of this enzyme%3B in some organisms%2C the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin);gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=NP_626335.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2227297	2229342	.	+	.	ID=id2595;Dbxref=GeneID:1097510;Note=Pfam match to entry PF00133 tRNA-synt_1%2C tRNA synthetases class I (I%2C L%2C M and V)%2C score 723.00%2C E-value 1.3e-213;gbkey=misc_feature;gene=ileS
NC_003888.3	RefSeq	stem_loop	2230512	2230549	.	+	.	ID=id2596;Note=stem%2C 17/17 (100%25) matches%2C 0 gaps%3B loop%2C 4 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2230582	2231778	.	-	.	ID=gene2078;Dbxref=GeneID:1097511;Name=SC4A10.10c;gbkey=Gene;gene=SC4A10.10c;gene_biotype=protein_coding;gene_synonym=SC4A10.10c;locus_tag=SCO2077
NC_003888.3	RefSeq	CDS	2230582	2231778	.	-	0	ID=cds2041;Parent=gene2078;Dbxref=Genbank:NP_626336.1,GeneID:1097511;Name=NP_626336.1;Note=SC4A10.10c%2C hypothetical protein%2C len: 398 aa%3B unknown function%2C probable Gln-%2C Met- and Pro-rich CDS suggested by GC frame plot%2C positional base preference and amino acid composition. Contains probable coiled-coils from 23 to 68 (46 residues) (Max score: 1.868%2C probability 1.00) and from 217 to 294 (78 residues) (Max score: 1.445%2C probability 0.86);gbkey=CDS;gene=SC4A10.10c;product=hypothetical protein;protein_id=NP_626336.1;transl_table=11
NC_003888.3	RefSeq	gene	2231834	2232118	.	-	.	ID=gene2079;Dbxref=GeneID:1097512;Name=SC4A10.11c;gbkey=Gene;gene=SC4A10.11c;gene_biotype=protein_coding;gene_synonym=SC4A10.11c;locus_tag=SCO2078
NC_003888.3	RefSeq	CDS	2231834	2232118	.	-	0	ID=cds2042;Parent=gene2079;Dbxref=Genbank:NP_626337.1,GeneID:1097512;Name=NP_626337.1;Note=SC4A10.11c%2C membrane protein%2C len: 94 aa%3B unknown function%2C similar to hypothetical proteins e.g. TR:O06230 (EMBL:Z95388) Mycobacterium tuberculosis hypothetical protein (96 aa)%2C fasta scores%3B opt: 262 z-score: 367.1 E(): 4e-13%2C 41.9%25 identity in 86 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4A10.11c;product=hypothetical protein;protein_id=NP_626337.1;transl_table=11
NC_003888.3	RefSeq	gene	2232200	2232841	.	-	.	ID=gene2080;Dbxref=GeneID:1097513;Name=SC4A10.12c;gbkey=Gene;gene=SC4A10.12c;gene_biotype=protein_coding;gene_synonym=SC4A10.12c;locus_tag=SCO2079
NC_003888.3	RefSeq	CDS	2232200	2232841	.	-	0	ID=cds2043;Parent=gene2080;Dbxref=Genbank:NP_626338.1,GeneID:1097513;Name=NP_626338.1;Note=SC4A10.12c%2C conserved hypothetical protein%2C len: 213 aa%3B unknown function%2C similar to hypothetical proteins e.g. TR:O06229 (EMBL:Z95388) Mycobacterium tuberculosis hypothetical protein (241 aa)%2C fasta scores%3B opt: 441 z-score: 479.6 E(): 2.2e-19%2C 40.8%25 identity in 218 aa overlap. The N-terminus is Asp- and Glu-rich;gbkey=CDS;gene=SC4A10.12c;product=hypothetical protein;protein_id=NP_626338.1;transl_table=11
NC_003888.3	RefSeq	gene	2232970	2233689	.	-	.	ID=gene2081;Dbxref=GeneID:1097514;Name=SC4A10.13c;gbkey=Gene;gene=SC4A10.13c;gene_biotype=protein_coding;gene_synonym=SC4A10.13c;locus_tag=SCO2080
NC_003888.3	RefSeq	CDS	2232970	2233689	.	-	0	ID=cds2044;Parent=gene2081;Dbxref=Genbank:NP_626339.1,GeneID:1097514;Name=NP_626339.1;Note=SC4A10.13c%2C conserved hypothetical protein%2C len: 239 aa%3B unknown function%2C similar to many hypothetical proteins e.g. SW:YPT5_PSEAE (EMBL:M55524) Pseudomonas aeruginosa hypothetical protein (230 aa)%2C fasta scores%3B opt: 464 z-score: 546.4 E(): 4.1e-23%2C 39.7%25 identity in 229 aa overlap. Contains Pfam match to entry PF01168 UPF0001%2C Uncharacterized protein family UPF0001 and PS01211 Uncharacterized protein family UPF0001 signature;gbkey=CDS;gene=SC4A10.13c;product=hypothetical protein;protein_id=NP_626339.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2232982	2233662	.	-	.	ID=id2597;Dbxref=GeneID:1097514;Note=Pfam match to entry PF01168 UPF0001%2C Uncharacterized protein family UPF0001%2C score 155.50%2C E-value 9e-43;gbkey=misc_feature;gene=SC4A10.13c
NC_003888.3	RefSeq	sequence_feature	2233408	2233452	.	-	.	ID=id2598;Dbxref=GeneID:1097514;Note=PS01211 Uncharacterized protein family UPF0001 signature;gbkey=misc_feature;gene=SC4A10.13c
NC_003888.3	RefSeq	gene	2233696	2234424	.	-	.	ID=gene2082;Dbxref=GeneID:1097515;Name=SC4A10.14c;gbkey=Gene;gene=SC4A10.14c;gene_biotype=protein_coding;gene_synonym=SC4A10.14c;locus_tag=SCO2081
NC_003888.3	RefSeq	CDS	2233696	2234424	.	-	0	ID=cds2045;Parent=gene2082;Dbxref=Genbank:NP_626340.1,GeneID:1097515;Name=NP_626340.1;Note=SC4A10.14c%2C conserved hypothetical protein%2C len: 242 aa%3B unknown function%2C similar to many hypothetical proteins e.g. SW:YFIH_STRGR (EMBL:U07344) Streptomyces griseus hypothetical protein (246 aa)%2C fasta scores%3B opt: 1246 z-score: 1349.0 E(): 0 76.3%25 identity in 245 aa overlap and SW:YFIH_ECOLI (EMBL:U50134)%2C YfiH%2C Escherichia coli hypothetical protein (243 aa) (38.5%25 identity in 247 aa overlap);gbkey=CDS;gene=SC4A10.14c;product=hypothetical protein;protein_id=NP_626340.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2234244	2239943	.	-	.	ID=id2599;Note=sequence equivalent to EMBL:U10879 from 1 to 5700;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2234421	2235620	.	-	.	ID=gene2083;Dbxref=GeneID:1097516;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;gene_synonym=ftsZ,SC4A10.15c;locus_tag=SCO2082
NC_003888.3	RefSeq	CDS	2234421	2235620	.	-	0	ID=cds2046;Parent=gene2083;Dbxref=Genbank:NP_626341.1,GeneID:1097516;Name=NP_626341.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;gene=ftsZ;product=cell division protein FtsZ;protein_id=NP_626341.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2235276	2235341	.	-	.	ID=id2600;Dbxref=GeneID:1097516;Note=PS01135 FtsZ protein signature 2;gbkey=misc_feature;gene=ftsZ
NC_003888.3	RefSeq	sequence_feature	2235396	2235500	.	-	.	ID=id2601;Dbxref=GeneID:1097516;Note=PS01134 FtsZ protein signature 1;gbkey=misc_feature;gene=ftsZ
NC_003888.3	RefSeq	gene	2235909	2236703	.	-	.	ID=gene2084;Dbxref=GeneID:1097517;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;gene_synonym=ftsQ,SC4A10.16c;locus_tag=SCO2083
NC_003888.3	RefSeq	CDS	2235909	2236703	.	-	0	ID=cds2047;Parent=gene2084;Dbxref=Genbank:NP_626342.1,GeneID:1097517;Name=NP_626342.1;Note=SC4A10.16c%2C ftsQ%2C sporulation protein%2C len: 264 aa%3B previously sequenced as SW:FTSQ_STRCO (EMBL:U10879)%2C ftsQ%2C Streptomyces coelicolor protein required for efficient sporulation%2C but not growth and viability (264 aa) and identical that sequence. Contains a hydrophobic%2C possible membrane-spanning region;gbkey=CDS;gene=ftsQ;product=sporulation protein;protein_id=NP_626342.1;transl_table=11
NC_003888.3	RefSeq	gene	2236729	2237823	.	-	.	ID=gene2085;Dbxref=GeneID:1097518;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;gene_synonym=SC4A10.17c;locus_tag=SCO2084
NC_003888.3	RefSeq	CDS	2236729	2237823	.	-	0	ID=cds2048;Parent=gene2085;Dbxref=Genbank:NP_626343.1,GeneID:1097518;Name=NP_626343.1;Note=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=NP_626343.1;transl_table=11
NC_003888.3	RefSeq	gene	2237830	2239200	.	-	.	ID=gene2086;Dbxref=GeneID:1097519;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;gene_synonym=ftsW,SC4A10.18c;locus_tag=SCO2085
NC_003888.3	RefSeq	CDS	2237830	2239200	.	-	0	ID=cds2049;Parent=gene2086;Dbxref=Genbank:NP_626344.1,GeneID:1097519;Name=NP_626344.1;Note=SC4A10.18c%2C ftsW%2C probable cell division protein%2C len%3B 456 aa%3B previously sequenced as TR:Q9ZBA6 (EMBL:U10879)%2C ftsW%2C Streptomyces coelicolor ftsW protein (456 aa) and identical to that sequence. Similar to many members of the ftsW/rodA/spoVE family e.g. SW:SP5E_BACSU (EMBL:X51419)%2C spoVE%2C Bacillus subtilis stage V sporulation protein (366 aa)%2C fasta scores%3B opt: 745 z-score: 788.4 E(): 0%2C 36.9%25 identity in 350 aa overlap. Shows similarity to SC6G9.31 (EMBL:AL079356) S.coelicolor probable integral membrane cell-cycle protein (446 aa) (30.0%25 identity in 416 aa overlap) and SCH69.16 (EMBL:AL079308) S.coelicolor probable FtsW/RodA/SpoVE family cell cycle protein (479 aa) (28.6%25 identity in 385 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein and PS00428 Cell cycle proteins ftsW/rodA/spoVE signature;gbkey=CDS;gene=ftsW;product=cell division protein;protein_id=NP_626344.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2237971	2239053	.	-	.	ID=id2602;Dbxref=GeneID:1097519;Note=Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein%2C score 340.10%2C E-value 2.5e-98;gbkey=misc_feature;gene=ftsW
NC_003888.3	RefSeq	sequence_feature	2238031	2238105	.	-	.	ID=id2603;Dbxref=GeneID:1097519;Note=PS00428 Cell cycle proteins ftsW / rodA / spoVE signature;gbkey=misc_feature;gene=ftsW
NC_003888.3	RefSeq	gene	2239278	2240693	.	-	.	ID=gene2087;Dbxref=GeneID:1097520;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;gene_synonym=SC4A10.19c;locus_tag=SCO2086
NC_003888.3	RefSeq	CDS	2239278	2240693	.	-	0	ID=cds2050;Parent=gene2087;Dbxref=Genbank:NP_626345.1,GeneID:1097520;Name=NP_626345.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=NP_626345.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2239650	2240345	.	-	.	ID=id2604;Dbxref=GeneID:1097520;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C score 167.50%2C E-value 2.2e-46;gbkey=misc_feature;gene=murD
NC_003888.3	RefSeq	gene	2240702	2241793	.	-	.	ID=gene2088;Dbxref=GeneID:1097521;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;gene_synonym=murX,SC4A10.20c;locus_tag=SCO2087
NC_003888.3	RefSeq	CDS	2240702	2241793	.	-	0	ID=cds2051;Parent=gene2088;Dbxref=Genbank:NP_626346.1,GeneID:1097521;Name=NP_626346.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=NP_626346.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2240930	2241535	.	-	.	ID=id2605;Dbxref=GeneID:1097521;Note=Pfam match to entry PF00953 Glycos_transf_4%2C Glycosyl transferase%2C score 197.20%2C E-value 2.5e-55;gbkey=misc_feature;gene=mraY
NC_003888.3	RefSeq	gene	2241793	2243208	.	-	.	ID=gene2089;Dbxref=GeneID:1097522;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;gene_synonym=murF,SC4A10.21c;locus_tag=SCO2088
NC_003888.3	RefSeq	CDS	2241793	2243208	.	-	0	ID=cds2052;Parent=gene2089;Dbxref=Genbank:NP_626347.1,GeneID:1097522;Name=NP_626347.1;Note=SC4A10.21c%2C murF%2C probable UDP-N-acetylmuramoylalanyl-D-glutamyl- 2%2C6-diaminopimelate- D-alanyl-alanyl ligase%2C len: 471 aa%3B similar to many e.g. SW:MURF_ECOLI (EMBL:X15432)%2C Mra%2C MurF%2C Escherichia coli UDP-N-acetylmuramoylalanyl-D-glutamyl- 2%2C6-diaminopimelate- D-alanyl-alanyl ligase (452 aa)%2C fasta scores%3B opt: 774 z-score: 866.3 E(): 0%2C 36.1%25 identity in 471 aa overlap. Also similar to SW:MURF_STRTO (EMBL:U82965)%2C MurF%2C MurX%2C Streptomyces toyocaensis probable UDP-N-acetylmuramoylalanyl-D-glutamyl- 2%2C6-diaminopimelate- D-alanyl-alanyl ligase (443 aa) (50.4%25 identity in 464 aa overlap). Shows weak similarity to others from S.coelicolor e.g. SC9B1.07 (EMBL:AL049727) S.coelicolor possible UDP-N-acetylmuramoyl-L-alanine ligase (462 aa) (24.1%25 identity in 464 aa overlap). Contains Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate- D-alanyl-alanyl ligase;protein_id=NP_626347.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2242183	2242899	.	-	.	ID=id2606;Dbxref=GeneID:1097522;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C score 213.30%2C E-value 3.8e-60;gbkey=misc_feature;gene=murF
NC_003888.3	RefSeq	gene	2243269	2244789	.	-	.	ID=gene2090;Dbxref=GeneID:1097523;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;gene_synonym=SC4A10.22c;locus_tag=SCO2089
NC_003888.3	RefSeq	CDS	2243269	2244789	.	-	0	ID=cds2053;Parent=gene2090;Dbxref=Genbank:NP_626348.1,GeneID:1097523;Name=NP_626348.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=NP_626348.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2243689	2244432	.	-	.	ID=id2607;Dbxref=GeneID:1097523;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C score 239.60%2C E-value 4.5e-68;gbkey=misc_feature;gene=murE
NC_003888.3	RefSeq	sequence_feature	2244499	2247449	.	-	.	ID=id2608;Note=sequence equivalent to EMBL:AF123319 from 1 to 2951 AF123319;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2244997	2246961	.	-	.	ID=gene2091;Dbxref=GeneID:1097524;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;gene_synonym=ftsI,SC4A10.23c;locus_tag=SCO2090
NC_003888.3	RefSeq	CDS	2244997	2246961	.	-	0	ID=cds2054;Parent=gene2091;Dbxref=Genbank:NP_626349.1,GeneID:1097524;Name=NP_626349.1;Note=SC4A10.23c%2C ftsI%2C cell division protein%2C len: 654 aa%3B previously sequenced as TR:Q9Z5V7 (EMBL:AF123319)%2C FtsI%2C Streptomyces coelicolor cell division protein (651 aa) and identical to that sequence%2C but with a different start codon. C-terminal end shares weak similarity with others from S.coelicolor e.g. SC6G9.32 (EMBL:AL079356) S.coelicolor possible penicillin-binding protein (485 aa) (29.3%25 identity in 447 aa overlap). Contains a hydrophobic%2C possible membrane-spanning region. Contains Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain and two PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=ftsI;product=cell division protein;protein_id=NP_626349.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2245081	2246085	.	-	.	ID=id2609;Dbxref=GeneID:1097524;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 311.30%2C E-value 1.1e-89;gbkey=misc_feature;gene=ftsI
NC_003888.3	RefSeq	sequence_feature	2245252	2245275	.	-	.	ID=id2610;Dbxref=GeneID:1097524;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ftsI
NC_003888.3	RefSeq	sequence_feature	2245666	2245689	.	-	.	ID=id2611;Dbxref=GeneID:1097524;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ftsI
NC_003888.3	RefSeq	gene	2246958	2247578	.	-	.	ID=gene2092;Dbxref=GeneID:1097525;Name=SC4A10.24c;gbkey=Gene;gene=SC4A10.24c;gene_biotype=protein_coding;gene_synonym=SC4A10.24c;locus_tag=SCO2091
NC_003888.3	RefSeq	CDS	2246958	2247578	.	-	0	ID=cds2055;Parent=gene2092;Dbxref=Genbank:NP_626350.1,GeneID:1097525;Name=NP_626350.1;Note=SC4A10.24c%2C possible membrane protein%2C len: 206 aa%3B unknown function%2C previously partially sequenced as TR:Q9Z5V8 (EMBL:AF123319) Streptomyces coelicolor hypothetical protein (fragment) (163 aa) and identical to that sequence. Similar to a central region of mycobacterial hypothetical proteins e.g. TR:O06213 (EMBL:Z95388) Mycobacterium tuberculosis hypothetical protein (384 aa)%2C fasta scores%3B opt: 282 z-score: 255.8 E(): 6.8e-07%2C 36.2%25 identity in 224 aa overlap. Contains a hydrophobic%2C possible membrane-spanning region and probable coiled-coil from 74 to 109 (36 residues) (Max score: 1.684%2C probability 1.00);gbkey=CDS;gene=SC4A10.24c;product=hypothetical protein;protein_id=NP_626350.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2247588	2247592	.	-	.	ID=id2612;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	2247685	2248617	.	-	.	ID=gene2093;Dbxref=GeneID:1097526;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;gene_synonym=SC4A10.25c;locus_tag=SCO2092
NC_003888.3	RefSeq	CDS	2247685	2248617	.	-	0	ID=cds2056;Parent=gene2093;Dbxref=Genbank:NP_626351.1,GeneID:1097526;Name=NP_626351.1;Note=SC4A10.25c%2C conserved hypothetical protein%2C len: 310 aa%3B unknown function%2C similar to many hypothetical proteins e.g. TR:O06212 (EMBL:Z95388) Mycobacterium tuberculosis hypothetical protein (396 aa)%2C fasta scores%3B opt: 1037 z-score: 1165.6 E(): 0%2C 53.7%25 identity in 313 aa overlap%2C which is longer at the N-terminus. The majority of possible homologues are 300-320 aa in length;gbkey=CDS;gene=mraW;product=S-adenosyl-methyltransferase MraW;protein_id=NP_626351.1;transl_table=11
NC_003888.3	RefSeq	gene	2249114	2249617	.	+	.	ID=gene2094;Dbxref=GeneID:1097527;Name=SC4A10.26;gbkey=Gene;gene=SC4A10.26;gene_biotype=protein_coding;gene_synonym=SC4A10.26;locus_tag=SCO2093
NC_003888.3	RefSeq	CDS	2249114	2249617	.	+	0	ID=cds2057;Parent=gene2094;Dbxref=Genbank:NP_626352.1,GeneID:1097527;Name=NP_626352.1;Note=SC4A10.26%2C conserved hypothetical protein%2C len: 167 aa%3B unknown function%2C similar to other hypothetical proteins e.g. SW:Y023_MYCTU (EMBL:Z73419) Mycobacterium tuberculosis hypothetical protein (163 aa)%2C fasta scores%3B opt: 567 z-score: 691.9 E(): 3.2e-31%2C 53.4%25 identity in 163 aa overlap. Very weak similarity to the C-terminus of many carbonic anhydrases e.g. TR:P93109 (EMBL:U80805) Chlamydomonas reinhardtii beta-carbonic anhydrase (267 aa) (24.3%25 identity in 181 aa overlap);gbkey=CDS;gene=SC4A10.26;product=hypothetical protein;protein_id=NP_626352.1;transl_table=11
NC_003888.3	RefSeq	gene	2249934	2250947	.	+	.	ID=gene2095;Dbxref=GeneID:1097528;Name=SC4A10.27;gbkey=Gene;gene=SC4A10.27;gene_biotype=protein_coding;gene_synonym=SC4A10.27;locus_tag=SCO2094
NC_003888.3	RefSeq	CDS	2249934	2250947	.	+	0	ID=cds2058;Parent=gene2095;Dbxref=Genbank:NP_626353.1,GeneID:1097528;Name=NP_626353.1;Note=SC4A10.27%2C possible regulatory protein%2C len: 337 aa%3B similar to many e.g. SW:MOXR_PARDE (EMBL:M57684)%2C MoxR%2C Paracoccus denitrificans protein probably involved in the regulation of methanol dehydrogenase synthesis (339 aa)%2C fasta scores%3B opt: 189 z-score:216.0 E(): 7.6e-05%2C 31.55%25 identity in 336 aa overlap. Similar to many hypothetical proteins e.g. TM1132 (EMBL:AE001771) Thermotoga maritima MoxR protein (305 aa) (52.1%25 identity in 303 aa overlap). Similar to TR:Q9Z538 (EMBL:AL035212) S.coelicolor possible regulatory protein (332 aa) (45.8%25 identity in 312 aa overlap);gbkey=CDS;gene=SC4A10.27;product=regulatory protein;protein_id=NP_626353.1;transl_table=11
NC_003888.3	RefSeq	gene	2250944	2252308	.	+	.	ID=gene2096;Dbxref=GeneID:1097529;Name=SC4A10.28;gbkey=Gene;gene=SC4A10.28;gene_biotype=protein_coding;gene_synonym=SC4A10.28;locus_tag=SCO2095
NC_003888.3	RefSeq	CDS	2250944	2252308	.	+	0	ID=cds2059;Parent=gene2096;Dbxref=Genbank:NP_626354.1,GeneID:1097529;Name=NP_626354.1;Note=SC4A10.28%2C possible membrane protein%2C len: 454 aa%3B unknown function%2C similar to parts of bacterial hypothetical proteins e.g. TR:P74479 (EMBL:D90915) Synechocystis sp hypothetical protein (406 aa)%2C fasta scores%3B opt: 266 z-score: 307.9 E(): 8e-10%2C 30.4%25 identity in 253 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions near the N-terminus;gbkey=CDS;gene=SC4A10.28;product=hypothetical protein;protein_id=NP_626354.1;transl_table=11
NC_003888.3	RefSeq	gene	2252305	2254698	.	+	.	ID=gene2097;Dbxref=GeneID:1097530;Name=SC4A10.29;gbkey=Gene;gene=SC4A10.29;gene_biotype=protein_coding;gene_synonym=SC4A10.29;locus_tag=SCO2096
NC_003888.3	RefSeq	CDS	2252305	2254698	.	+	0	ID=cds2060;Parent=gene2097;Dbxref=Genbank:NP_626355.1,GeneID:1097530;Name=NP_626355.1;Note=SC4A10.29%2C possible membrane protein%2C len: 797 aa%3B unknown function%2C shows weak similarity to parts of other bacterial hypothetical proteins e.g. TR:P94476 (EMBL:U51115)%2C yebA%2C Bacillus subtilis hypothetical protein (655 aa)%2C fasta scores%3B opt: 335 z-score: 330.0 E(): 4.7e-11%2C 30.4%25 identity in 263 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions in the N-terminus;gbkey=CDS;gene=SC4A10.29;product=hypothetical protein;protein_id=NP_626355.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	2254774	2254818	.	+	.	ID=id2613;Note=stem%2C 20/20 (100%25) matches%2C 0 gaps%3B loop%2C 5 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2254850	2255257	.	-	.	ID=gene2098;Dbxref=GeneID:1097531;Name=SC4A10.30c;gbkey=Gene;gene=SC4A10.30c;gene_biotype=protein_coding;gene_synonym=SC4A10.30c;locus_tag=SCO2097
NC_003888.3	RefSeq	CDS	2254850	2255257	.	-	0	ID=cds2061;Parent=gene2098;Dbxref=Genbank:NP_626356.1,GeneID:1097531;Name=NP_626356.1;Note=SC4A10.30c%2C possible membrane protein%2C len: 135 aa%3B unknown function%2C similar to mycobacterial hypothetical proteins TR:O53503 (EMBL:AL021957) Mycobacterium tuberculosis (134 aa)%2C fasta scores%3B opt: 349 z-score: 414.6 E(): 9e-16%2C 44.1%25 identity in 136 aa overlap and its homologue in Mycobacterium leprae TR:O69562 (EMBL:AL022602) Mycobacterium leprae hypothetical protein (134 aa) (42.6%25 identity in 136 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC4A10.30c;product=hypothetical protein;protein_id=NP_626356.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2255263	2255268	.	-	.	ID=id2614;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	2255534	2256349	.	-	.	ID=gene2099;Dbxref=GeneID:1097532;Name=SC4A10.31c;gbkey=Gene;gene=SC4A10.31c;gene_biotype=protein_coding;gene_synonym=SC4A10.31c;locus_tag=SCO2098
NC_003888.3	RefSeq	CDS	2255534	2256349	.	-	0	ID=cds2062;Parent=gene2099;Dbxref=Genbank:NP_626357.1,GeneID:1097532;Name=NP_626357.1;Note=SC4A10.31c%2C possible methyltransferase%2C len: 271 aa%3B shows weak similarity to SW:SMTA_ECOLI (EMBL:D26440)%2C SmtA%2C Escherichia coli S-adenosylmethionine-dependent methyltransferase (261 aa)%2C fasta scores%3B opt: 311 z-score: 330.3 E(): 4.5e-11%2C 32.0%25 identity in 250 aa overlap and to SC5F7.31 (EMBL:AL096872) S.coelicolor possible methyltransferase (233 aa) (34.3%25 identity in 236 aa overlap);gbkey=CDS;gene=SC4A10.31c;product=methyltransferase;protein_id=NP_626357.1;transl_table=11
NC_003888.3	RefSeq	gene	2256540	2257046	.	+	.	ID=gene2100;Dbxref=GeneID:1097533;Name=SC4A10.32;gbkey=Gene;gene=SC4A10.32;gene_biotype=protein_coding;gene_synonym=SC4A10.32;locus_tag=SCO2099
NC_003888.3	RefSeq	CDS	2256540	2257046	.	+	0	ID=cds2063;Parent=gene2100;Dbxref=Genbank:NP_626358.1,GeneID:1097533;Name=NP_626358.1;Note=SC4A10.32%2C hypothetical protein%2C len: 168 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SC4A10.32;product=hypothetical protein;protein_id=NP_626358.1;transl_table=11
NC_003888.3	RefSeq	gene	2257287	2257916	.	+	.	ID=gene2101;Dbxref=GeneID:1097534;Name=SC4A10.33;gbkey=Gene;gene=SC4A10.33;gene_biotype=protein_coding;gene_synonym=SC4A10.33;locus_tag=SCO2100
NC_003888.3	RefSeq	CDS	2257287	2257916	.	+	0	ID=cds2064;Parent=gene2101;Dbxref=Genbank:NP_626359.1,GeneID:1097534;Name=NP_626359.1;Note=SC4A10.33%2C probable transcriptional regulator%2C len: 209 aa%3B shows weak similarity to many hypothetical proteins e.g. TR:O53641 (EMBL:AL021927) Mycobacterium tuberculosis hypothetical protein (214 aa)%2C fasta scores%3B opt: 224 z-score: 282.1 E(): 2.2e-08%2C 28.8%25 identity in 208 aa overlap and to SCI30A.20c (EMBL:AL096811) S.coelicolor possible transcriptional regulator (215 aa) (31.6%25 identity in 190 aa overlap). Contains probable helix-turn-helix motif at aa 38-59 (Score 1454%2C +4.14 SD) and Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SC4A10.33;product=transcriptional regulator;protein_id=NP_626359.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2257347	2257487	.	+	.	ID=id2615;Dbxref=GeneID:1097534;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 58.00%2C E-value 2.4e-14;gbkey=misc_feature;gene=SC4A10.33
NC_003888.3	RefSeq	gene	2258402	2259922	.	+	.	ID=gene2102;Dbxref=GeneID:1097535;Name=SC4A10.34;gbkey=Gene;gene=SC4A10.34;gene_biotype=protein_coding;gene_synonym=SC4A10.34;locus_tag=SCO2101
NC_003888.3	RefSeq	CDS	2258402	2259922	.	+	0	ID=cds2065;Parent=gene2102;Dbxref=Genbank:NP_626360.1,GeneID:1097535;Name=NP_626360.1;Note=SC4A10.34%2C probable carotenoid dehydrogenase ( hypothetical protein)%2C len: 506 aa%3B similar to many bacterial and fungal carotenoid dehydrogenases e.g. SW:CRTD_RHOSH (EMBL:X63204) CrtD%2C Rhodobacter sphaeroides methoxyneurosporene dehydrogenase (495 aa)%2C fasta scores%3B opt: 470 z-score: 505.2 E(): 8.1e-21%2C 29.2%25 identity in 506 aa overlap. Shows very weak similarity to TR:Q9ZBG4 (EMBL:AL035206) S. coelicolor possible dehydrogenase (472 aa) (28.1%25 identity in 523 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4A10.34;product=carotenoid dehydrogenase;protein_id=NP_626360.1;transl_table=11
NC_003888.3	RefSeq	gene	2259944	2260936	.	-	.	ID=gene2103;Dbxref=GeneID:1097536;Name=SC4A10.35c;gbkey=Gene;gene=SC4A10.35c;gene_biotype=protein_coding;gene_synonym=SC4A10.35c;locus_tag=SCO2102
NC_003888.3	RefSeq	CDS	2259944	2260936	.	-	0	ID=cds2066;Parent=gene2103;Dbxref=Genbank:NP_626361.1,GeneID:1097536;Name=NP_626361.1;Note=SC4A10.35c%2C possible membrane protein%2C len: 330 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. The C-terminal half is Gln-rich. Contains hydrophobic%2C possible membrane-spanning regions in the N-terminus;gbkey=CDS;gene=SC4A10.35c;product=hypothetical protein;protein_id=NP_626361.1;transl_table=11
NC_003888.3	RefSeq	gene	2260993	2261916	.	-	.	ID=gene2104;Dbxref=GeneID:1097537;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;gene_synonym=metF,SC4A10.36c;locus_tag=SCO2103
NC_003888.3	RefSeq	CDS	2260993	2261916	.	-	0	ID=cds2067;Parent=gene2104;Dbxref=Genbank:NP_626362.1,GeneID:1097537;Name=NP_626362.1;Note=SC4A10.36c%2C metF%2C 5%2C10-methylenetetrahydrofolate reductase%2C len: 307 aa%3B identical to SW:METF_STRLI (EMBL:AJ001630)%2C MetF%2C Streptomyces lividans 5%2C10-methylenetetrahydrofolate reductase (307 aa)%2C apart from substitution of Arg41 for Lys41 in S.coelicolor%2C fasta scores%3B opt: 2015 z-score: 2364.3 E(): 0%2C 99.7%25 identity in 307 aa overlap;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=NP_626362.1;transl_table=11
NC_003888.3	RefSeq	gene	2262055	2262726	.	-	.	ID=gene2105;Dbxref=GeneID:1097538;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;gene_synonym=SC4A10.37c;locus_tag=SCO2104
NC_003888.3	RefSeq	CDS	2262055	2262726	.	-	0	ID=cds2068;Parent=gene2105;Dbxref=Genbank:NP_626363.1,GeneID:1097538;Name=NP_626363.1;Note=Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate;gbkey=CDS;gene=thiE;product=thiamine-phosphate pyrophosphorylase;protein_id=NP_626363.1;transl_table=11
NC_003888.3	RefSeq	gene	2262881	2263246	.	-	.	ID=gene2106;Dbxref=GeneID:1097539;Name=SC2C1A.01c;gbkey=Gene;gene=SC2C1A.01c;gene_biotype=protein_coding;gene_synonym=SC2C1A.01c,SC4A10.38c;locus_tag=SCO2105
NC_003888.3	RefSeq	CDS	2262881	2263246	.	-	0	ID=cds2069;Parent=gene2106;Dbxref=Genbank:NP_733557.1,GeneID:1097539;Name=NP_733557.1;Note=SC2C1A.01c%2C possible transcriptional regulatory protein%2C partial CDS%2C len: > 57 aa. Similar to Mycobacterium tuberculosis TR:O53509 (EMBL:AL021957) hypothetical protein (146 aa)%2C fasta scores opt: 137 z-score: 204.5 E(): 0.00048 42.3%25 identity in 71 aa overlap. Overlaps and extends into CDS SC4A10.38c on the adjoining cosmid. Contains a helix-turn-helix motif situated between residues 17..38 (+4.08 SD).~SC4A10.38c%2C conserved hypothetical protein%2C partial CDS%2C len: >86 aa%3B similar to mycobacterial hypothetical proteins TR:O53509 (EMBL:AL021957) Mycobacterium tuberculosis hypothetical protein (146 aa)%2C fasta scores%3B opt: 198 z-score: 273.9 E(): 6.2e-08%2C 43.9%25 identity in 98 aa overlap and TR:O69567 (EMBL:AL022602) Mycobacterium leprae possible transcriptional regulator (134 aa) (44.8%25 identity in 96 aa overlap);gbkey=CDS;gene=SC2C1A.01c;product=transcriptional regulator;protein_id=NP_733557.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2263042	2263142	.	+	.	ID=id2616;Note=overlap with Streptomyces coelicolor cosmid 2C1A from 1 to 101;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	2263248	2263252	.	-	.	ID=id2617;gbkey=RBS
NC_003888.3	RefSeq	gene	2263288	2264511	.	-	.	ID=gene2107;Dbxref=GeneID:1097540;Name=SC2C1A.02c;gbkey=Gene;gene=SC2C1A.02c;gene_biotype=protein_coding;gene_synonym=SC2C1A.02c;locus_tag=SCO2106
NC_003888.3	RefSeq	CDS	2263288	2264511	.	-	0	ID=cds2070;Parent=gene2107;Dbxref=Genbank:NP_626364.1,GeneID:1097540;Name=NP_626364.1;Note=SC2C1A.02c%2C possible oxidoreductase%2C len: 407 aa. Highly similar to several reductases including: Rhodococcus sp. (strain NI86/21) SW:THCD_RHOSN(EMBL:U17130) rhodocoxin reductase (EC 1.18.1.-) (426 aa)%2C fasta scores opt: 792 z-score: 833.9 E():0 36.9%25 identity in 412 aa overlap and Sphingomonas sp. TR:O65946(EMBL:AJ002606) reductase%2C RedA2%2C protein (409 aa)%2C fasta scores opt:794 z-score: 836.2 E():0 40.1%25 identity in 409 aa overlap;gbkey=CDS;gene=SC2C1A.02c;product=oxidoreductase;protein_id=NP_626364.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2264518	2264521	.	-	.	ID=id2618;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2264811	2264815	.	+	.	ID=id2619;gbkey=RBS
NC_003888.3	RefSeq	gene	2264828	2266033	.	+	.	ID=gene2108;Dbxref=GeneID:1097541;Name=SC2C1A.03;gbkey=Gene;gene=SC2C1A.03;gene_biotype=protein_coding;gene_synonym=SC2C1A.03,SC6E10.01;locus_tag=SCO2107
NC_003888.3	RefSeq	CDS	2264828	2266033	.	+	0	ID=cds2071;Parent=gene2108;Dbxref=Genbank:NP_733558.1,GeneID:1097541;Name=NP_733558.1;Note=SC6E10.01%2C possible oxidoreductase%2C partial CDS%2C len: >375 aa%3B similar to TR:O85228 (EMBL:AF053760)%2C HcnC%2C Pseudomonas fluorescens hydrogen cyanide synthase (417 aa)%2C fasta scores%3B opt: 511 z-score: 564.8 E(): 3.9e-24%2C 30.7%25 identity in 348 aa overlap%2C although they are more divergent at the N-terminus. Also similar to many other oxidoreductases and hypothetical proteins~SC2C1A.03%2C possible oxidoreductase%2C partial CDS%2C len: > 40 aa. Similar to Bacillus subtilis SW:DLD2_BACSU(EMBL:D84432) dihydrolipoamide dehydrogenase (EC 1.8.1.4) (474 aa)%2C fasta scores opt: 111 z-score: 145.4 E(): 0.94 54.3%25 identity in 35 aa overlap. Overlaps and extends into CDS SC6E10.01 on the adjoining cosmid;gbkey=CDS;gene=SC2C1A.03;product=oxidoreductase;protein_id=NP_733558.1;transl_table=11
NC_003888.3	RefSeq	gene	2266030	2266230	.	+	.	ID=gene2109;Dbxref=GeneID:1097542;Name=SC6E10.02;gbkey=Gene;gene=SC6E10.02;gene_biotype=protein_coding;gene_synonym=SC6E10.02;locus_tag=SCO2108
NC_003888.3	RefSeq	CDS	2266030	2266230	.	+	0	ID=cds2072;Parent=gene2109;Dbxref=Genbank:NP_626365.1,GeneID:1097542;Name=NP_626365.1;Note=SC6E10.02%2C conserved hypothetical protein%2C len: 66 aa%3B unknown function%2C similar to e.g. SW:THIS_ECOLI (EMBL:M88701)%2C ThiS%2C ThiG1%2C Escherichia coli hypothetical protein in thiamine biosynthetic operon (66 aa)%2C fasta scores%3B opt: 138 z-score: 203.8 E(): 0.0005%2C 30.3%25 identity in 66 aa overlap and to TR:P96262 (EMBL:Z84724) Mycobacterium tuberculosis hypothetical protein (68 aa) (39.7%25 identity in 68 aa overlap);gbkey=CDS;gene=SC6E10.02;product=hypothetical protein;protein_id=NP_626365.1;transl_table=11
NC_003888.3	RefSeq	gene	2266233	2267027	.	+	.	ID=gene2110;Dbxref=GeneID:1097543;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;gene_synonym=SC6E10.03;locus_tag=SCO2109
NC_003888.3	RefSeq	CDS	2266233	2267027	.	+	0	ID=cds2073;Parent=gene2110;Dbxref=Genbank:NP_626366.1,GeneID:1097543;Name=NP_626366.1;Note=functions in thiamine (vitamin B1) biosynthesis%3B in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate;gbkey=CDS;gene=thiG;product=thiazole synthase;protein_id=NP_626366.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2266720	2269211	.	+	.	ID=id2620;Note=sequence equivalent to Streptomyces coelicolor gene for eukaryotic-type protein kinase (EMBL:AB019394);gbkey=misc_feature
NC_003888.3	RefSeq	gene	2267186	2269189	.	+	.	ID=gene2111;Dbxref=GeneID:1097544;Name=pkaF;gbkey=Gene;gene=pkaF;gene_biotype=protein_coding;gene_synonym=pkaF,SC6E10.04;locus_tag=SCO2110
NC_003888.3	RefSeq	CDS	2267186	2269189	.	+	0	ID=cds2074;Parent=gene2111;Dbxref=Genbank:NP_626367.1,GeneID:1097544;Name=NP_626367.1;Note=SC6E10.04%2C pkaF%2C probable eukaryotic-type Ser/Thr protein kinase%2C len: 667 aa%3B previously sequenced as TR:Q9ZNB3 (EMBL:AB019394) S.coelicolor eukaryotic-type protein kinase (629 aa) and identical to that sequence%2C but with a different start codon. Similar to many e.g. SW:PKN2_MYXXA (EMBL:M94857)%2C Pkn2%2C Myxococcus xanthus Ser/Thr protein kinase involved in regulation of beta-lactamase secretion (830 aa)%2C fasta scores%3B opt: 564 z-score: 531.4 E(): 2.8e-22%2C 35.5%25 identity in 366 aa overlap. Similar to many hypothetical protein Ser/Thr protein kinases from mycobacteria e.g. TR:O53510 (EMBL:AL021957) Mycobacterium tuberculosis (399 aa) (43.4%25 identity in 394 aa overlap). Similar to others from S.coelicolor e.g. SCH69.18 (EMBL:AL079308) S.coelicolor possible Ser/Thr protein kinase (673 aa) (34.7%25 identity in 622 aa overlap). Alternative start codons are present at codons 3 and 11. Contains probable coiled-coil from 543 to 576 (34 residues) (Max score: 1.485%2C probability 0.93). Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and PS00108 Ser/Thr protein kinases active-site signature and possible hydrophobic membrane spanning region;gbkey=CDS;gene=pkaF;product=Ser/Thr protein kinase;protein_id=NP_626367.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2267267	2267956	.	+	.	ID=id2621;Dbxref=GeneID:1097544;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 177.50%2C E-value 2.2e-49;gbkey=misc_feature;gene=pkaF
NC_003888.3	RefSeq	sequence_feature	2267624	2267662	.	+	.	ID=id2622;Dbxref=GeneID:1097544;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaF
NC_003888.3	RefSeq	gene	2269374	2270258	.	+	.	ID=gene2112;Dbxref=GeneID:1097545;Name=SC6E10.05;gbkey=Gene;gene=SC6E10.05;gene_biotype=protein_coding;gene_synonym=SC6E10.05;locus_tag=SCO2111
NC_003888.3	RefSeq	CDS	2269374	2270258	.	+	0	ID=cds2075;Parent=gene2112;Dbxref=Genbank:NP_626368.1,GeneID:1097545;Name=NP_626368.1;Note=SC6E10.05%2C probable endonuclease%2C len: 294 aa%3B similar to many DNA-repair endonucleases e.g. SW:END4_ECOLI (EMBL:M22591)%2C nfo%2C Escherichia coli endonuclease IV (285 aa)%2C fasta scores%3B opt: 482 z-score: 516.5 E(): 1.9e-21%2C 33.3%25 identity in 279 aa overlap and SW:APN1_YEAST (EMBL:M33667)%2C apn1%2C Saccharomyces cerevisiae DNA-(apurinic or apyrimidinic site) lyase (366 aa) (28.4%25 identity in 289 aa overlap). Contains Pfam match to entry PF01261 AP_endonuclease2%2C AP endonuclease family 2%2C PS00730 AP endonucleases family 2 signature 2 and PS00731 AP endonucleases family 2 signature 3;gbkey=CDS;gene=SC6E10.05;product=endonuclease;protein_id=NP_626368.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2269428	2270252	.	+	.	ID=id2623;Dbxref=GeneID:1097545;Note=Pfam match to entry PF01261 AP_endonuclease2%2C AP endonuclease family 2%2C score 193.00%2C E-value 4.8e-54;gbkey=misc_feature;gene=SC6E10.05
NC_003888.3	RefSeq	sequence_feature	2269932	2269955	.	+	.	ID=id2624;Dbxref=GeneID:1097545;Note=PS00730 AP endonucleases family 2 signature 2;gbkey=misc_feature;gene=SC6E10.05
NC_003888.3	RefSeq	sequence_feature	2270052	2270096	.	+	.	ID=id2625;Dbxref=GeneID:1097545;Note=PS00731 AP endonucleases family 2 signature 3;gbkey=misc_feature;gene=SC6E10.05
NC_003888.3	RefSeq	gene	2270305	2270952	.	-	.	ID=gene2113;Dbxref=GeneID:1097546;Name=SC6E10.06c;gbkey=Gene;gene=SC6E10.06c;gene_biotype=protein_coding;gene_synonym=SC6E10.06c;locus_tag=SCO2112
NC_003888.3	RefSeq	CDS	2270305	2270952	.	-	0	ID=cds2076;Parent=gene2113;Dbxref=Genbank:NP_626369.1,GeneID:1097546;Name=NP_626369.1;Note=SC6E10.06c%2C hypothetical protein%2C len: 215 aa%3B unknown function%2C similar to hypothetical proteins e.g. TR:O32103 (EMBL:Z99120) Bacillus subtilis hypothetical protein (198 aa)%2C fasta scores%3B opt: 522 z-score: 625.8 E(): 1.5e-27%2C 40.6%25 identity in 192 aa overlap. Shares a short sequence motif from aa 150-160 with many oxidoreductases (sulfite oxidases and nitrate reductases). An alternative start codon is present at codon 5;gbkey=CDS;gene=SC6E10.06c;product=hypothetical protein;protein_id=NP_626369.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2270960	2270963	.	-	.	ID=id2626;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	2271144	2271647	.	+	.	ID=gene2114;Dbxref=GeneID:1097547;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;gene_synonym=bfr,SC6E10.07;locus_tag=SCO2113
NC_003888.3	RefSeq	CDS	2271144	2271647	.	+	0	ID=cds2077;Parent=gene2114;Dbxref=Genbank:NP_626370.1,GeneID:1097547;Name=NP_626370.1;Note=SC6E10.07%2C bfr%2C probable bacterioferritin%2C len: 167 aa%3B highly similar to SW:BFR_MYCAV (EMBL:X76906) Bfr%2C Mycobacterium avium bacterioferritin (159 aa)%2C fasta scores%3B opt: 672 z-score: 815.6 E(): 0%2C 63.6%25 identity in 162 aa overlap. Contains Pfam match to entry PF01334 Bacteriofer%2C Bacterioferritin;gbkey=CDS;gene=bfr;product=bacterioferritin;protein_id=NP_626370.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2271144	2271605	.	+	.	ID=id2627;Dbxref=GeneID:1097547;Note=Pfam match to entry PF01334 Bacteriofer%2C Bacterioferritin%2C score 282.10%2C E-value 7.2e-81;gbkey=misc_feature;gene=bfr
NC_003888.3	RefSeq	gene	2271664	2271915	.	-	.	ID=gene2115;Dbxref=GeneID:1097548;Name=SC6E10.08c;gbkey=Gene;gene=SC6E10.08c;gene_biotype=protein_coding;gene_synonym=SC6E10.08c;locus_tag=SCO2114
NC_003888.3	RefSeq	CDS	2271664	2271915	.	-	0	ID=cds2078;Parent=gene2115;Dbxref=Genbank:NP_626371.1,GeneID:1097548;Name=NP_626371.1;Note=SC6E10.08c%2C hypothetical protein%2C len: 83 aa%3B unknown function%2C similar to part of many nitrate or nitrite reductases e.g. SW:NIR_EMENI (EMBL:M58289)%2C NiiA%2C Emericella nidulans nitrite reductase (1104 aa)%2C fasta scores%3B opt: 137 z-score: 178.6 E(): 0.013%2C 38.0%25 identity in 50 aa overlap;gbkey=CDS;gene=SC6E10.08c;product=hypothetical protein;protein_id=NP_626371.1;transl_table=11
NC_003888.3	RefSeq	gene	2272073	2273425	.	-	.	ID=gene2116;Dbxref=GeneID:1097549;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;gene_synonym=aroH,SC6E10.09c;locus_tag=SCO2115
NC_003888.3	RefSeq	CDS	2272073	2273425	.	-	0	ID=cds2079;Parent=gene2116;Dbxref=Genbank:NP_626372.1,GeneID:1097549;Name=NP_626372.1;Note=SC6E10.09c%2C aroH%2C probable 2-dehydro-3-deoxyphosphoheptonate aldolase%2C len: 450 aa%3B highly similar to many%2C especially those from plants e.g. SW:AROF_ARATH (EMBL:M74819)%2C Dhs1%2C Arabidopsis thaliana phospho-2-dehydro-3-deoxyheptonate aldolase 1 precursor (525 aa)%2C fasta scores%3B opt: 1633 z-score: 1839.4 E(): 0%2C 53.8%25 identity in 437 aa overlap. The N-terminus is similar (but not identical) to the SW:AROF_STRCO%2C AroH%2C Streptomyces coelicolor 2-dehydro-3-deoxyphosphoheptonate aldolase N-terminal sequence determined from purified protein (TVNAKTSPSA GNTDDPLQAP S). Similar to TR:O52308 (EMBL:AF035756) Streptomyces sp. 2-dehydro-3-deoxyphosphoheptonate aldolase (fragment) (448 aa) (90.4%25 identity in 448 aa overlap). Also similar to TR:Q9Z4X1 (EMBL:AL035654)%2C Aro%2C S.coelicolor probable 2-dehydro-3-deoxyheptonate aldolase (484 aa) (53.6%25 identity in 440 aa overlap). An alternative start codon is present at codon 3. Contains Pfam match to entry PF01474 DAHP_synth_2%2C Class-II DAHP synthetase family;gbkey=CDS;gene=aroH;product=2-dehydro-3-deoxyphosphoheptonate aldolase;protein_id=NP_626372.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2272094	2273410	.	-	.	ID=id2628;Dbxref=GeneID:1097549;Note=Pfam match to entry PF01474 DAHP_synth_2%2C Class-II DAHP synthetase family%2C score 928.30%2C E-value 2.2e-275;gbkey=misc_feature;gene=aroH
NC_003888.3	RefSeq	gene	2273596	2276427	.	+	.	ID=gene2117;Dbxref=GeneID:1097550;Name=SC6E10.10;gbkey=Gene;gene=SC6E10.10;gene_biotype=protein_coding;gene_synonym=SC6E10.10;locus_tag=SCO2116
NC_003888.3	RefSeq	CDS	2273596	2276427	.	+	0	ID=cds2080;Parent=gene2117;Dbxref=Genbank:NP_626373.1,GeneID:1097550;Name=NP_626373.1;Note=SC6E10.10%2C possible hypothetical protein%2C len: 943 aa%3B unknown function%2C similar in parts to bacterial AmpD (amidase) proteins e.g. TR:Q46959 (EMBL:U40805)%2C AmpD%2C Enterobacter cloacae anhydro-N-acetylmuramyl-tripeptide amidase (187 aa)%2C fasta scores%3B opt: 208 z-score: 224.7 E(): 3.4e-05%2C 37.4%25 identity in 123 aa overlap. Similar to parts of others from S.coelicolor e.g. SCH35.49C (EMBL:AL078610) S.coelicolor hypothetical protein (410 aa) (37.7%25 identity in 252 aa overlap). Contains possible N-terminal signal sequence. The C-terminus contains 5x degenerate 50 aa repeats;gbkey=CDS;gene=SC6E10.10;product=hypothetical protein;protein_id=NP_626373.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2275687	2276424	.	+	.	ID=id2629;Dbxref=GeneID:1097550;Note=5x approx. 150 bp degenerate repeats;gbkey=repeat_region;gene=SC6E10.10
NC_003888.3	RefSeq	gene	2276703	2278607	.	+	.	ID=gene2118;Dbxref=GeneID:1097551;Name=SC6E10.11;gbkey=Gene;gene=SC6E10.11;gene_biotype=protein_coding;gene_synonym=SC6E10.11,trpE1;locus_tag=SCO2117
NC_003888.3	RefSeq	CDS	2276703	2278607	.	+	0	ID=cds2081;Parent=gene2118;Dbxref=Genbank:NP_626374.1,GeneID:1097551;Name=NP_626374.1;Note=SC6E10.11%2C trpE1%2C probable anthranilate synthase%2C len: 634 aa%3B highly similar to many anthranilate synthases e.g. TR:O30589 (EMBL:AF012627)%2C TrpE%2C Streptomyces venezuelae anthranilate synthase (623 aa)%2C fasta scores%3B opt: 3108 z-score: 3257.7 E(): 0%2C 80.0%25 identity in 620 aa overlap. Anthranilate synthases may have one or two components. This protein is similar at the C-terminus to TR:Q9Z4W8 (EMBL:AL035654)%2C TrpG%2C S.coelicolor probable anthranilate synthase component II (200 aa) (32.7%25 identity in 202 aa overlap) and centrally to TR:Q9Z4W7 (EMBL:AL035654)%2C trpE2%2C S.coelicolor probable anthranilate synthase component I (511 aa) (30.6%25 identity in 301 aa overlap) which appear to constitute a two-component type enzyme. Contains two Pfam matches to entry PF00425 chorismate_bind%2C chorismate binding enzyme and Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I;gbkey=CDS;gene=SC6E10.11;product=anthranilate synthase;protein_id=NP_626374.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2277021	2277302	.	+	.	ID=id2630;Dbxref=GeneID:1097551;Note=Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme%2C score 29.80%2C E-value 1e-07;gbkey=misc_feature;gene=SC6E10.11
NC_003888.3	RefSeq	sequence_feature	2277504	2277845	.	+	.	ID=id2631;Dbxref=GeneID:1097551;Note=Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme%2C score 56.90%2C E-value 1.4e-15;gbkey=misc_feature;gene=SC6E10.11
NC_003888.3	RefSeq	sequence_feature	2277993	2278562	.	+	.	ID=id2632;Dbxref=GeneID:1097551;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 41.00%2C E-value 1.1e-10;gbkey=misc_feature;gene=SC6E10.11
NC_003888.3	RefSeq	gene	2278559	2279554	.	-	.	ID=gene2119;Dbxref=GeneID:1097552;Name=dldh2;gbkey=Gene;gene=dldh2;gene_biotype=protein_coding;gene_synonym=dldh2,SCE10.12c;locus_tag=SCO2118
NC_003888.3	RefSeq	CDS	2278559	2279554	.	-	0	ID=cds2082;Parent=gene2119;Dbxref=Genbank:NP_626375.1,GeneID:1097552;Name=NP_626375.1;Note=Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate%2C alpha-ketoglutarate%2C and to a much lower extent%2C KHTCA%2C but not pyruvate. Involved in the biosynthes;gbkey=CDS;gene=dldh2;product=D-lactate dehydrogenase;protein_id=NP_626375.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2278673	2279326	.	-	.	ID=id2633;Dbxref=GeneID:1097552;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 262.70%2C E-value 2.9e-107;gbkey=misc_feature;gene=dldh2
NC_003888.3	RefSeq	sequence_feature	2279579	2280770	.	-	.	ID=id2634;Note=sequence equivalent to Streptomyces coelicolor phosphofructokinase ATP-PFK gene (EMBL:U51728) from 56 to 1247;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2279638	2280666	.	-	.	ID=gene2120;Dbxref=GeneID:1097553;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;gene_synonym=pfkA,SC6E10.13c;locus_tag=SCO2119
NC_003888.3	RefSeq	CDS	2279638	2280666	.	-	0	ID=cds2083;Parent=gene2120;Dbxref=Genbank:NP_626376.1,GeneID:1097553;Name=NP_626376.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;gene=pfkA;product=6-phosphofructokinase;protein_id=NP_626376.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2279767	2280663	.	-	.	ID=id2635;Dbxref=GeneID:1097553;Note=Pfam match to entry PF00365 PFK%2C Phosphofructokinase%2C score 330.00%2C E-value 1.7e-120;gbkey=misc_feature;gene=pfkA
NC_003888.3	RefSeq	sequence_feature	2279815	2279871	.	-	.	ID=id2636;Dbxref=GeneID:1097553;Note=PS00433 Phosphofructokinase signature;gbkey=misc_feature;gene=pfkA
NC_003888.3	RefSeq	gene	2280718	2281365	.	-	.	ID=gene2121;Dbxref=GeneID:1097554;Name=SC6E10.14c;gbkey=Gene;gene=SC6E10.14c;gene_biotype=protein_coding;gene_synonym=SC6E10.14c;locus_tag=SCO2120
NC_003888.3	RefSeq	CDS	2280718	2281365	.	-	0	ID=cds2084;Parent=gene2121;Dbxref=Genbank:NP_626377.1,GeneID:1097554;Name=NP_626377.1;Note=SC6E10.14c%2C probable two-component system regulator%2C len: 215 aa%3B similar to many e.g. SW:DEGU_BACBR (EMBL:M21658)%2C DegU%2C Bacillus brevis transcriptional regulatory protein for the production of extracellular proteases (236 aa)%2C fasta scores%3B opt: 443 z-score: 510.2 E(): 4.3e-21%2C 36.5%25 identity in 219 aa overlap. Similar to others from S.coelicolor e.g. SCH10.18C (EMBL:AL049754) S.coelicolor probable two-component system regulator (228 aa) (37.9%25 identity in 214 aa overlap). Contains probable helix-turn-helix motif at aa 169-190 (Score 1764%2C +5.19 SD). Contains Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain and to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=CDS;gene=SC6E10.14c;product=two-component system regulator;protein_id=NP_626377.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2280721	2280918	.	-	.	ID=id2637;Dbxref=GeneID:1097554;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 90.60%2C E-value 3.2e-23;gbkey=misc_feature;gene=SC6E10.14c
NC_003888.3	RefSeq	sequence_feature	2280784	2280867	.	-	.	ID=id2638;Dbxref=GeneID:1097554;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC6E10.14c
NC_003888.3	RefSeq	sequence_feature	2281036	2281365	.	-	.	ID=id2639;Dbxref=GeneID:1097554;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 107.70%2C E-value 2.3e-28;gbkey=misc_feature;gene=SC6E10.14c
NC_003888.3	RefSeq	gene	2281433	2282674	.	-	.	ID=gene2122;Dbxref=GeneID:1097555;Name=SC6E10.15c;gbkey=Gene;gene=SC6E10.15c;gene_biotype=protein_coding;gene_synonym=SC6E10.15c;locus_tag=SCO2121
NC_003888.3	RefSeq	CDS	2281433	2282674	.	-	0	ID=cds2085;Parent=gene2122;Dbxref=Genbank:NP_626378.1,GeneID:1097555;Name=NP_626378.1;Note=SC6E10.15c%2C possible two-component system sensor kinase%2C len: 413 aa%3B similar to many e.g. SW:DEGS_BACBR (EMBL:L15444)%2C DegS%2C Bacillus brevis sensor protein (386 aa)%2C fasta scores%3B opt: 174 z-score: 193.4 E(): 0.0019%2C 23.4%25 identity in 278 aa overlap. The N-terminal approx. 100 aa are different from many of the homologues. Similar to others from S.coelicolor e.g. SCE126.08C (EMBL:AL049630) S.coelicolor possible two component sensor kinase (401 aa) (26.6%25 identity in 323 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions in the N-terminal half;gbkey=CDS;gene=SC6E10.15c;product=two-component system sensor kinase;protein_id=NP_626378.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2282681	2282685	.	-	.	ID=id2640;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	2282715	2283503	.	-	.	ID=gene2123;Dbxref=GeneID:1097556;Name=SC6E10.16c;gbkey=Gene;gene=SC6E10.16c;gene_biotype=protein_coding;gene_synonym=SC6E10.16c;locus_tag=SCO2122
NC_003888.3	RefSeq	CDS	2282715	2283503	.	-	0	ID=cds2086;Parent=gene2123;Dbxref=Genbank:NP_626379.1,GeneID:1097556;Name=NP_626379.1;Note=SC6E10.16c%2C conserved hypothetical protein%2C len: 262 aa%3B unknown function%2C similar to part of TR:O33970 (EMBL:U80063) Streptomyces cinnamoneus hypothetical protein (199 aa)%2C fasta scores%3B opt: 827 z-score: 903.5 E(): 0%2C 61.9%25 identity in 202 aa overlap and to hypothetical proteins from Mycobacterium tuberculosis and Mycobacterium leprae e.g. TR:O69572 (EMBL:AL022602) Mycobacterium leprae hypothetical protein (244 aa) (54.0%25 identity in 215 aa overlap). Similar to others from S.coelicolor e.g. TR:Q9ZBS1 (EMBL:AL034447) S.coelicolor possible acyltransferase (264 aa) (33.2%25 identity in 250 aa overlap). C-terminus contains 5x slightly degenerate KAAK(A/N)(D/E) repeats. Contains probable coiled-coil from 214 to 255 (42 residues) (Max score: 1.475%2C probability 0.92);gbkey=CDS;gene=SC6E10.16c;product=hypothetical protein;protein_id=NP_626379.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2282736	2282825	.	-	.	ID=id2641;Dbxref=GeneID:1097556;Note=5x 18 bp direct repeats;gbkey=repeat_region;gene=SC6E10.16c
NC_003888.3	RefSeq	ribosome_entry_site	2283511	2283515	.	-	.	ID=id2642;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2283626	2283630	.	+	.	ID=id2643;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	2283639	2284442	.	+	.	ID=gene2124;Dbxref=GeneID:1097557;Name=SC6E10.17;gbkey=Gene;gene=SC6E10.17;gene_biotype=protein_coding;gene_synonym=SC6E10.17;locus_tag=SCO2123
NC_003888.3	RefSeq	CDS	2283639	2284442	.	+	0	ID=cds2087;Parent=gene2124;Dbxref=Genbank:NP_626380.1,GeneID:1097557;Name=NP_626380.1;Note=SC6E10.17%2C possible esterase/lipase%2C len: 267 aa%3B similar to esterases e.g. SW:EST_BACST (EMBL:D12681)%2C Est%2C Bacillus stearothermophilus carboxylesterase precursor (247 aa)%2C fasta scores%3B opt: 333 z-score: 387.6 E(): 2.9e-14%2C 32.7%25 identity in 251 aa overlap;gbkey=CDS;gene=SC6E10.17;product=esterase/lipase;protein_id=NP_626380.1;transl_table=11
NC_003888.3	RefSeq	gene	2284435	2285052	.	+	.	ID=gene2125;Dbxref=GeneID:1097558;Name=SC6E10.18;gbkey=Gene;gene=SC6E10.18;gene_biotype=protein_coding;gene_synonym=SC6E10.18;locus_tag=SCO2124
NC_003888.3	RefSeq	CDS	2284435	2285052	.	+	0	ID=cds2088;Parent=gene2125;Dbxref=Genbank:NP_626381.1,GeneID:1097558;Name=NP_626381.1;Note=SC6E10.18%2C membrane protein%2C len: 205 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. The amino acid composition of this CDS is unusual%2C being Pro-rich and having a very acidic N-terminus. Contains probable coiled-coil from 1 to 29 (29 residues) (Max score: 1.455%2C probability 0.88). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6E10.18;product=hypothetical protein;protein_id=NP_626381.1;transl_table=11
NC_003888.3	RefSeq	gene	2285077	2285838	.	-	.	ID=gene2126;Dbxref=GeneID:1097559;Name=SC6E10.19c;gbkey=Gene;gene=SC6E10.19c;gene_biotype=protein_coding;gene_synonym=SC6E10.19c;locus_tag=SCO2125
NC_003888.3	RefSeq	CDS	2285077	2285838	.	-	0	ID=cds2089;Parent=gene2126;Dbxref=Genbank:NP_626382.1,GeneID:1097559;Name=NP_626382.1;Note=SC6E10.19c%2C hypothetical protein%2C len: 362 aa%3B unknown function%2C weak similarity to Y63D3A.4 (EMBL:AL032652) Caenorhabditis elegans hypothetical protein (362 aa)%2C fasta scores%3B opt: 172 z-score: 209.3 E(): 0.00025%2C 28.7%25 identity in 181 aa overlap;gbkey=CDS;gene=SC6E10.19c;product=hypothetical protein;protein_id=NP_626382.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2285861	2288664	.	-	.	ID=id2644;Note=sequence equivalent to S.coelicolor glk gene for glucose kinase (EMBL:X65932) from 1 to 2804;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2285983	2286936	.	-	.	ID=gene2127;Dbxref=GeneID:1097560;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;gene_synonym=glk,SC6E10.20c;locus_tag=SCO2126
NC_003888.3	RefSeq	CDS	2285983	2286936	.	-	0	ID=cds2090;Parent=gene2127;Dbxref=Genbank:NP_626383.1,GeneID:1097560;Name=NP_626383.1;Note=SC6E10.20c%2C glk%2C glucokinase%2C len: 317 aa%3B previously sequenced as SW:GLK_STRCO (EMBL:X65932)%2C Glk%2C Streptomyces coelicolor glucokinase (317 aa)%2C identical to this sequence. Similar to other ROK-family proteins from S.coelicolor e.g. TR:O69941 (EMBL:AL023862) S. coelicolor hypothetical ROK family protein (403 aa) (34.7%25 identity in 317 aa overlap). Pfam match to entry PF00480 ROK%2C ROK family and PS01125 ROK family signature;gbkey=CDS;gene=glk;product=glucokinase;protein_id=NP_626383.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2286385	2286921	.	-	.	ID=id2645;Dbxref=GeneID:1097560;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 328.50%2C E-value 1.3e-96;gbkey=misc_feature;gene=glk
NC_003888.3	RefSeq	sequence_feature	2286466	2286549	.	-	.	ID=id2646;Dbxref=GeneID:1097560;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=glk
NC_003888.3	RefSeq	gene	2286991	2287566	.	-	.	ID=gene2128;Dbxref=GeneID:1097561;Name=SC6E10.21c;gbkey=Gene;gene=SC6E10.21c;gene_biotype=protein_coding;gene_synonym=SC6E10.21c;locus_tag=SCO2127
NC_003888.3	RefSeq	CDS	2286991	2287566	.	-	0	ID=cds2091;Parent=gene2128;Dbxref=Genbank:NP_626384.1,GeneID:1097561;Name=NP_626384.1;Note=SC6E10.21c%2C hypothetical protein%2C len: 191 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Previously sequenced as SW:YGL2_STRCO (EMBL:X65932) Streptomyces coelicolor hypothetical protein (191 aa)%2C identical to this sequence;gbkey=CDS;gene=SC6E10.21c;product=hypothetical protein;protein_id=NP_626384.1;transl_table=11
NC_003888.3	RefSeq	gene	2287637	2288911	.	-	.	ID=gene2129;Dbxref=GeneID:1097562;Name=SC6E10.22c;gbkey=Gene;gene=SC6E10.22c;gene_biotype=protein_coding;gene_synonym=SC6E10.22c,SC6G10.01c;locus_tag=SCO2128
NC_003888.3	RefSeq	CDS	2287637	2288911	.	-	0	ID=cds2092;Parent=gene2129;Dbxref=Genbank:NP_733559.1,GeneID:1097562;Name=NP_733559.1;Note=SC6G10.01c%2C partial CDS%2C unknown%2C len: >40aa%3B~SC6E10.22c%2C hypothetical protein%2C len: 390 aa%3B unknown function%2C similar to the N-terminal half of anion-transporter ATPases e.g. TR:O50593 (EMBL:AB004659)%2C arsA%2C Acidiphilium multivorum plasmid pKW301 arsenite activated ATPase of translocating ATPase (583 aa)%2C fasta scores%3B opt: 190 z-score: 208.0 E(): 0.00029%2C 27.3%25 identity in 267 aa overlap. Previously partially sequenced as SW:YGL1_STRCO (EMBL:X65932) Streptomyces coelicolor hypothetical protein (341 aa)%2C identical to this sequence;gbkey=CDS;gene=SC6E10.22c;product=hypothetical protein;protein_id=NP_733559.1;transl_table=11
NC_003888.3	RefSeq	gene	2289023	2289457	.	-	.	ID=gene2130;Dbxref=GeneID:1097563;Name=SC6G10.02c;gbkey=Gene;gene=SC6G10.02c;gene_biotype=protein_coding;gene_synonym=SC6G10.02c;locus_tag=SCO2129
NC_003888.3	RefSeq	CDS	2289023	2289457	.	-	0	ID=cds2093;Parent=gene2130;Dbxref=Genbank:NP_626385.1,GeneID:1097563;Name=NP_626385.1;Note=SC6G10.02c%2C hypothetical protein%2C len: 144 aa%3B similar to hypothetical proteins from Mycobacterium eg. TR:O53519 (EMBL:AL021957) hypothetical protein from Mycobacterium tuberculosis (144 aa) fasta scores%3B opt: 479%2C z-score: 620.2%2C E(): 3.1e-27%2C (49.0%25 identity in 143 aa overlap);gbkey=CDS;gene=SC6G10.02c;product=hypothetical protein;protein_id=NP_626385.1;transl_table=11
NC_003888.3	RefSeq	gene	2289595	2290392	.	-	.	ID=gene2131;Dbxref=GeneID:1097564;Name=SC6G10.03c;gbkey=Gene;gene=SC6G10.03c;gene_biotype=protein_coding;gene_synonym=SC6G10.03c;locus_tag=SCO2130
NC_003888.3	RefSeq	CDS	2289595	2290392	.	-	0	ID=cds2094;Parent=gene2131;Dbxref=Genbank:NP_626386.1,GeneID:1097564;Name=NP_626386.1;Note=SC6G10.03c%2C hypothetical protein%2C len: 265 aa%3B weak similarity to many eg. TR:P95860 (EMBL:Y08256) Sulfolobus solfataricus hypothetical protein ORF CO6013 (309 aa) fasta scores%3B opt: 152%2C z-score: 186.9%2C E(): 0.0041%2C (24.8%25 identity in 270 aa overlap).;gbkey=CDS;gene=SC6G10.03c;product=hypothetical protein;protein_id=NP_626386.1;transl_table=11
NC_003888.3	RefSeq	gene	2290703	2292499	.	+	.	ID=gene2132;Dbxref=GeneID:1097565;Name=SC6G10.04;gbkey=Gene;gene=SC6G10.04;gene_biotype=protein_coding;gene_synonym=SC6G10.04;locus_tag=SCO2131
NC_003888.3	RefSeq	CDS	2290703	2292499	.	+	0	ID=cds2095;Parent=gene2132;Dbxref=Genbank:NP_626387.1,GeneID:1097565;Name=NP_626387.1;Note=SC6G10.04%2C probable long chain fatty acid CoA ligase%2C len: 598 aa%3B similar to many e.g. TR:E1359128 (EMBL:AL034443) long chain fatty acid CoA ligase from Streptomyces coelicolor (608 aa) fasta scores%3B opt: 1347%2C z-score: 1506.7%2C E(): 0%2C (51.3%25 identity in 608 aa overlap) and SW:LCFB_RAT long chain fatty acid CoA ligase from Rattus norvegicus (Rat) (699 aa) fasta scores%3B opt: 568%2C z-score: 634.7%2C E(): 4.7e-28%2C (30.2%25 identity in 589 aa overlap). Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and Prosite match to PS00455  AMP-binding domain signature.;gbkey=CDS;gene=SC6G10.04;product=long chain fatty acid CoA ligase;protein_id=NP_626387.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2290841	2292178	.	+	.	ID=id2647;Dbxref=GeneID:1097565;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score -28.50%2C E-value 3.2e-13.;gbkey=misc_feature;gene=SC6G10.04
NC_003888.3	RefSeq	sequence_feature	2291249	2291284	.	+	.	ID=id2648;Dbxref=GeneID:1097565;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=SC6G10.04
NC_003888.3	RefSeq	gene	2292487	2293725	.	-	.	ID=gene2133;Dbxref=GeneID:1097566;Name=SC6G10.05c;gbkey=Gene;gene=SC6G10.05c;gene_biotype=protein_coding;gene_synonym=SC6G10.05c;locus_tag=SCO2132
NC_003888.3	RefSeq	CDS	2292487	2293725	.	-	0	ID=cds2096;Parent=gene2133;Dbxref=Genbank:NP_626388.1,GeneID:1097566;Name=NP_626388.1;Note=SC6G10.05c%2C possible glycosyl transferase%2C len: 412 aa%3B similar to TR:O53522 (EMBL:AL021957) hypothetical protein from Mycobacterium tuberculosis (399 aa) fasta scores%3B opt: 1276%2C z-score: 1452.2%2C E(): 0%2C (51.9%25 identity in 391 aa overlap) and SW:WCAL_SALTY colanic acid biosynthesis glycosyl transferase from the Rfb (O antigen) gene cluster of Salmonella typhimurium (406 aa) fasta scores%3B opt: 291%2C z-score: 334.2%2C E(): 2.6e-11%2C (29.0%25 identity in 300 aa overlap). Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1;gbkey=CDS;gene=SC6G10.05c;product=glycosyl transferase;protein_id=NP_626388.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2292640	2293113	.	-	.	ID=id2649;Dbxref=GeneID:1097566;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 86.70%2C E-value 1.1e-23.;gbkey=misc_feature;gene=SC6G10.05c
NC_003888.3	RefSeq	gene	2293882	2295147	.	+	.	ID=gene2134;Dbxref=GeneID:1097567;Name=SC6G10.06;gbkey=Gene;gene=SC6G10.06;gene_biotype=protein_coding;gene_synonym=SC6G10.06;locus_tag=SCO2133
NC_003888.3	RefSeq	CDS	2293882	2295147	.	+	0	ID=cds2097;Parent=gene2134;Dbxref=Genbank:NP_626389.1,GeneID:1097567;Name=NP_626389.1;Note=SC6G10.06%2C possible integral membrane protein%2C len: 421 aa%3B similar to hypothetical proteins eg. TR:P71708 (EMBL:Z80775) hypothetical protein from Mycobacterium tuberculosis fasta scores%3B opt: 230%2C z-score: 251.3%2C E(): 1.1e-06%2C (27.1%25 identity in 417 aa overlap). Contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SC6G10.06;product=hypothetical protein;protein_id=NP_626389.1;transl_table=11
NC_003888.3	RefSeq	gene	2295175	2296332	.	-	.	ID=gene2135;Dbxref=GeneID:1097568;Name=SC6G10.07c;gbkey=Gene;gene=SC6G10.07c;gene_biotype=protein_coding;gene_synonym=SC6G10.07c;locus_tag=SCO2134
NC_003888.3	RefSeq	CDS	2295175	2296332	.	-	0	ID=cds2098;Parent=gene2135;Dbxref=Genbank:NP_626390.1,GeneID:1097568;Name=NP_626390.1;Note=SC6G10.07c%2C unknown%2C len: 385aa%3B similar to TR:O53523 (EMBL:AL021957) hypothetical protein from Mycobacterium tuberculosis (257 aa) fasta scores%3B opt: 225%2C z-score: 262.9%2C E(): 2.4e-07%2C (33.1%25 identity in 254 aa overlap).;gbkey=CDS;gene=SC6G10.07c;product=hypothetical protein;protein_id=NP_626390.1;transl_table=11
NC_003888.3	RefSeq	gene	2296454	2297470	.	-	.	ID=gene2136;Dbxref=GeneID:1097569;Name=SC6G10.08c;gbkey=Gene;gene=SC6G10.08c;gene_biotype=protein_coding;gene_synonym=SC6G10.08c;locus_tag=SCO2135
NC_003888.3	RefSeq	CDS	2296454	2297470	.	-	0	ID=cds2099;Parent=gene2136;Dbxref=Genbank:NP_626391.1,GeneID:1097569;Name=NP_626391.1;Note=SC6G10.08c%2C possible hypothetical protein%2C len: 338 aa%3B similar to TR:O69580 (EMBL:AL022602) hypothetical protein from Mycobacterium leprae (374 aa) fasta scores%3B opt: 382%2C z-score: 384.3%2C E(): 4.2e-14%2C (32.4%25 identity in 358 aa overlap). Also similar to several examples of Listeria P60 a major extracellular protein involved in the invasion of non-professional phagocytic cells eg. SW:P60_LISIV from Listeria ivanovii (524 aa) fasta scores%3B opt: 337%2C z-score: 338.3%2C E(): 1.5e-11%2C (29.1%25 identity in 309 aa overlap). Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family and the C-terminus%2C a probable membrane spanning hydrophobic region towards the N-terminus and two possible coiled coil regions. NOTE: highly similar to upstream gene%2C 6G10.09c%2C indicating a duplication event%3B fasta scores: opt: 1042%2C z-score: 843.1%2C E(): 0%2C (49.9%25 identity in 339 aa overlap).;gbkey=CDS;gene=SC6G10.08c;product=hypothetical protein;protein_id=NP_626391.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2296457	2296771	.	-	.	ID=id2650;Dbxref=GeneID:1097569;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 126.60%2C E-value 4.5e-34.;gbkey=misc_feature;gene=SC6G10.08c
NC_003888.3	RefSeq	gene	2297707	2298750	.	-	.	ID=gene2137;Dbxref=GeneID:1097570;Name=SC6G10.09c;gbkey=Gene;gene=SC6G10.09c;gene_biotype=protein_coding;gene_synonym=SC6G10.09c;locus_tag=SCO2136
NC_003888.3	RefSeq	CDS	2297707	2298750	.	-	0	ID=cds2100;Parent=gene2137;Dbxref=Genbank:NP_626392.1,GeneID:1097570;Name=NP_626392.1;Note=SC6G10.09c%2C possible hypothetical protein%2C len: 347 aa%3B similar to TR:E1370194 (EMBL:Y13601) hypothetical protein from Streptomyces lividans (250 aa) fasta scores%3B opt: 371%2C z-score: 366.3%2C E(): 4.3e-13%2C (31.4%25 identity in 229 aa overlap). Also similar to several examples of Listeria P60 a major extracellular protein involved in the invasion of non-professional phagocytic cells e.g. SW:P60_LISMO from Listeria monocytogenes (484 aa) fasta scores%3B opt: 351%2C z-score: 343.1%2C E(): 8.3e-12%2C (33.3%25 identity in 201 aa overlap). Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family at the C-terminus%2C a probable N-terminal signal sequence and two possible coiled coils. NOTE: highly similar to downstream gene%2C 6G10.08c%2C indicating a duplication event%3B fasta scores: opt: 1042%2C z-score: 1027.7%2C E(): 0%2C (49.9%25 identity in 339 aa overlap);gbkey=CDS;gene=SC6G10.09c;product=hypothetical protein;protein_id=NP_626392.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2297710	2298033	.	-	.	ID=id2651;Dbxref=GeneID:1097570;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 129.90%2C E-value 4.7e-35.;gbkey=misc_feature;gene=SC6G10.09c
NC_003888.3	RefSeq	gene	2298982	2300325	.	-	.	ID=gene2138;Dbxref=GeneID:1097571;Name=SC6G10.10c;gbkey=Gene;gene=SC6G10.10c;gene_biotype=protein_coding;gene_synonym=SC6G10.10c;locus_tag=SCO2137
NC_003888.3	RefSeq	CDS	2298982	2300325	.	-	0	ID=cds2101;Parent=gene2138;Dbxref=Genbank:NP_626393.1,GeneID:1097571;Name=NP_626393.1;Note=SC6G10.10c%2C unknown%2C len: 447aa%3B some similarity to TR:Q60218 (EMBL:L10330) TraN from plasmid RP4 of Escherichia coli (261 aa) fasta scores%3B opt: 176%2C z-score: 185.4%2C E(): 0.005%2C (29.5%25 identity in 224 aa overlap). Contains probable coiled coil region.;gbkey=CDS;gene=SC6G10.10c;product=hypothetical protein;protein_id=NP_626393.1;transl_table=11
NC_003888.3	RefSeq	gene	2300388	2300627	.	-	.	ID=gene2139;Dbxref=GeneID:1097572;Name=SC6G10.11c;gbkey=Gene;gene=SC6G10.11c;gene_biotype=protein_coding;gene_synonym=SC6G10.11c;locus_tag=SCO2138
NC_003888.3	RefSeq	CDS	2300388	2300627	.	-	0	ID=cds2102;Parent=gene2139;Dbxref=Genbank:NP_626394.1,GeneID:1097572;Name=NP_626394.1;Note=SC6G10.11c%2C len: 79aa;gbkey=CDS;gene=SC6G10.11c;product=hypothetical protein;protein_id=NP_626394.1;transl_table=11
NC_003888.3	RefSeq	gene	2300785	2301555	.	+	.	ID=gene2140;Dbxref=GeneID:1097573;Name=SC6G10.12;gbkey=Gene;gene=SC6G10.12;gene_biotype=protein_coding;gene_synonym=SC6G10.12;locus_tag=SCO2139
NC_003888.3	RefSeq	CDS	2300785	2301555	.	+	0	ID=cds2103;Parent=gene2140;Dbxref=Genbank:NP_626395.1,GeneID:1097573;Name=NP_626395.1;Note=SC6G10.12%2C possible integral membrane protein%2C len: 256aa%3B similar to TR:O69868 (EMBL:AL023702) integral membrane protein from Streptomyces coelicolor (383 aa) fasta scores%3B opt: 569%2C z-score: 706.4%2C E(): 4.8e-32%2C (44.6%25 identity in 242 aa overlap). Contains possible hydrophobic membrane sapnning regions;gbkey=CDS;gene=SC6G10.12;product=hypothetical protein;protein_id=NP_626395.1;transl_table=11
NC_003888.3	RefSeq	gene	2301552	2301833	.	+	.	ID=gene2141;Dbxref=GeneID:1097574;Name=SC6G10.13;gbkey=Gene;gene=SC6G10.13;gene_biotype=protein_coding;gene_synonym=SC6G10.13;locus_tag=SCO2140
NC_003888.3	RefSeq	CDS	2301552	2301833	.	+	0	ID=cds2104;Parent=gene2141;Dbxref=Genbank:NP_626396.1,GeneID:1097574;Name=NP_626396.1;Note=SC6G10.13%2C possible transcriptional regulator%2C len: 93 aa%3B similar to many e.g. TR:O28868 (EMBL:AE001007) transcriptional regulatory protein%2C AsnC family from Archaeoglobus fulgidus (77 aa) fasta scores%3B opt: 148%2C z-score: 216.7%2C E(): 9.1e-05%2C (40.8%25 identity in 71 aa overlap) and SW: LRP_ECOLI Lrp%2C leucine responsive regulatory protein from Escherichia coli (163 aa) fasta scores%3B opt: 107%2C z-score: 157.6%2C E(): 0.18%2C (24.7%25 identity in 85 aa overlap).;gbkey=CDS;gene=SC6G10.13;product=transcriptional regulator;protein_id=NP_626396.1;transl_table=11
NC_003888.3	RefSeq	gene	2301983	2302306	.	+	.	ID=gene2142;Dbxref=GeneID:1097575;Name=SC6G10.14;gbkey=Gene;gene=SC6G10.14;gene_biotype=protein_coding;gene_synonym=SC6G10.14;locus_tag=SCO2141
NC_003888.3	RefSeq	CDS	2301983	2302306	.	+	0	ID=cds2105;Parent=gene2142;Dbxref=Genbank:NP_626397.1,GeneID:1097575;Name=NP_626397.1;Note=SC6G10.14%2C possible small  hydrophilic protein%2C len: 107aa%3B contains possible N-terminal signal sequence.;gbkey=CDS;gene=SC6G10.14;product=small hydrophilic protein;protein_id=NP_626397.1;transl_table=11
NC_003888.3	RefSeq	gene	2302365	2303729	.	+	.	ID=gene2143;Dbxref=GeneID:1097576;Name=SC6G10.15;gbkey=Gene;gene=SC6G10.15;gene_biotype=protein_coding;gene_synonym=SC6G10.15;locus_tag=SCO2142
NC_003888.3	RefSeq	CDS	2302365	2303729	.	+	0	ID=cds2106;Parent=gene2143;Dbxref=Genbank:NP_626398.1,GeneID:1097576;Name=NP_626398.1;Note=SC6G10.15%2C possible two component sensor kinase%2C len: 454 aa%3B similar to many e.g. SW:CUTS_STRCO CutS%2C two component sensor kinase involved in the regulation of copper metabolism in Streptomyces lividans 66 (414 aa) fasta scores%3B opt: 537%2C z-score: 580.3%2C E(): 5.1e-25%2C (34.8%25 identity in 328 aa overlap). Contains Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain and Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins. Also contains a possible membrane spanning hydrophobic region;gbkey=CDS;gene=SC6G10.15;product=two component sensor kinase;protein_id=NP_626398.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2302854	2303063	.	+	.	ID=id2652;Dbxref=GeneID:1097576;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 68.90%2C E-value 1.1e-16.;gbkey=misc_feature;gene=SC6G10.15
NC_003888.3	RefSeq	sequence_feature	2303103	2303714	.	+	.	ID=id2653;Dbxref=GeneID:1097576;Note=Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 172.70%2C E-value 6.2e-48.;gbkey=misc_feature;gene=SC6G10.15
NC_003888.3	RefSeq	gene	2303726	2304391	.	+	.	ID=gene2144;Dbxref=GeneID:1097577;Name=SC6G10.16;gbkey=Gene;gene=SC6G10.16;gene_biotype=protein_coding;gene_synonym=SC6G10.16;locus_tag=SCO2143
NC_003888.3	RefSeq	CDS	2303726	2304391	.	+	0	ID=cds2107;Parent=gene2144;Dbxref=Genbank:NP_626399.1,GeneID:1097577;Name=NP_626399.1;Note=SC6G10.16%2C possible two component system response regulator%2C len: 221aa%3B similar to many eg. SW:IRLR_BURPS two component response regulator involved in heavy-metal resistance in Burkholderia pseudomallei (229 aa) fasta scores%3B opt: 635%2C z-score: 758.0%2C E(): 0%2C (50.0%25 identity in 220 aa overlap). Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal.;gbkey=CDS;gene=SC6G10.16;product=two component system response regulator;protein_id=NP_626399.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2303729	2304064	.	+	.	ID=id2654;Dbxref=GeneID:1097577;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 124.10%2C E-value 2.5e-33.;gbkey=misc_feature;gene=SC6G10.16
NC_003888.3	RefSeq	sequence_feature	2304167	2304370	.	+	.	ID=id2655;Dbxref=GeneID:1097577;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 108.90%2C E-value 3.1e-31.;gbkey=misc_feature;gene=SC6G10.16
NC_003888.3	RefSeq	gene	2304481	2305890	.	+	.	ID=gene2145;Dbxref=GeneID:1097578;Name=SC6G10.17;gbkey=Gene;gene=SC6G10.17;gene_biotype=protein_coding;gene_synonym=SC6G10.17;locus_tag=SCO2144
NC_003888.3	RefSeq	CDS	2304481	2305890	.	+	0	ID=cds2108;Parent=gene2145;Dbxref=Genbank:NP_626400.1,GeneID:1097578;Name=NP_626400.1;Note=SC6G10.17%2C possible integral membrane transporter%2C len: 469aa%3B similar to many eg. SW:CITT_ECOLI CitR%2C citrate transporter from Escherichia coli (487 aa) fasta scores%3B opt: 257%2C z-score: 284.2%2C E(): 1.6e-08%2C (23.3%25 identity in 454 aa overlap). Contains Pfam match to entry PF00939 Na_sulph_symp%2C Sodium:sulfate symporter transmembrane region%2C score -165.10%2C E-value 3.2e-06 and several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC6G10.17;product=integral membrane transporter;protein_id=NP_626400.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2304481	2305878	.	+	.	ID=id2656;Dbxref=GeneID:1097578;Note=Pfam match to entry PF00939 Na_sulph_symp%2C Sodium:sulfate symporter transmembrane region%2C score -165.10%2C E-value 3.2e-06.;gbkey=misc_feature;gene=SC6G10.17
NC_003888.3	RefSeq	gene	2305901	2307199	.	+	.	ID=gene2146;Dbxref=GeneID:1097579;Name=SC6G10.18;gbkey=Gene;gene=SC6G10.18;gene_biotype=protein_coding;gene_synonym=SC6G10.18;locus_tag=SCO2145
NC_003888.3	RefSeq	CDS	2305901	2307199	.	+	0	ID=cds2109;Parent=gene2146;Dbxref=Genbank:NP_626401.1,GeneID:1097579;Name=NP_626401.1;Note=SC6G10.18%2C unknown%2C len: 432aa%3B similar to many hypothetical proteins eg. SW:YXAA_BACSU hypothetical protein from Bacillus subtilis (382 aa) fasta scores%3B opt: 1005%2C z-score: 1049.9%2C E(): 0%2C (44.1%25 identity in 381 aa overlap). Note predicted C-terminal overlap with downstream CDS. Simialr also to SW:GRK_BACSU (EMBL:AB005554) Bacillus subtilis glycerate kinase (EC 2.7.1.31) GlxK or S14A%2C 382 aa%3B fasta scores: opt: 1005 Z-score:1015.2 E(): 6.5e-49%3B 44.094%25 identity in 381 aa overlap;gbkey=CDS;gene=SC6G10.18;product=glycerate kinase;protein_id=NP_626401.1;transl_table=11
NC_003888.3	RefSeq	gene	2307076	2308506	.	-	.	ID=gene2147;Dbxref=GeneID:1097580;Name=SC6G10.19c;gbkey=Gene;gene=SC6G10.19c;gene_biotype=protein_coding;gene_synonym=SC6G10.19c;locus_tag=SCO2146
NC_003888.3	RefSeq	CDS	2307076	2308506	.	-	0	ID=cds2110;Parent=gene2147;Dbxref=Genbank:NP_626402.1,GeneID:1097580;Name=NP_626402.1;Note=SC6G10.19c%2C possible aminotransferase%2C len: 476 aa%3B similar to SW:CSDB_ECOLI (EMBL:AE000263) Escherichia coli selenocysteine lyase (EC 4.4.1.16) CsdB%2C 406 aa%3B fasta scores: opt: 565 Z-score: 628.7 E(): 2.3e-27%3B 33.862%25 identity in 378 aa overlap. Contains Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V. Note: C-terminus overlaps with downstream gene.;gbkey=CDS;gene=SC6G10.19c;product=aminotransferase;protein_id=NP_626402.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2307244	2308395	.	-	.	ID=id2657;Dbxref=GeneID:1097580;Note=Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V%2C score -38.80%2C E-value 3.2e-05.;gbkey=misc_feature;gene=SC6G10.19c
NC_003888.3	RefSeq	gene	2308851	2309915	.	-	.	ID=gene2148;Dbxref=GeneID:1097581;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;gene_synonym=SC6G10.20c,trpD1;locus_tag=SCO2147
NC_003888.3	RefSeq	CDS	2308851	2309915	.	-	0	ID=cds2111;Parent=gene2148;Dbxref=Genbank:NP_626403.1,GeneID:1097581;Name=NP_626403.1;Note=Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=trpD;product=anthranilate phosphoribosyltransferase;protein_id=NP_626403.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2309415	2309861	.	-	.	ID=id2658;Dbxref=GeneID:1097581;Note=Pfam match to entry PF00591 Glycos_transf_3%2C glycosyl transferase family%2C score 244.30%2C E-value 1.7e-69.;gbkey=misc_feature;gene=trpD
NC_003888.3	RefSeq	gene	2310047	2311684	.	-	.	ID=gene2149;Dbxref=GeneID:1097582;Name=qcrB;gbkey=Gene;gene=qcrB;gene_biotype=protein_coding;gene_synonym=qcrB,SC6G10.21c;locus_tag=SCO2148
NC_003888.3	RefSeq	CDS	2310047	2311684	.	-	0	ID=cds2112;Parent=gene2149;Dbxref=Genbank:NP_626404.1,GeneID:1097582;Name=NP_626404.1;Note=SC6G10.21c%2C qcrB%2C cytochrome B subunit%2C len: 545 aa%3B almost identical to one previously sequenced in Streptomyces lividans TR:G4154324 (EMBL:AF107888) (549 aa) fasta scores: opt: 3501%2C z-score: 3791.6%2C E(): 0%2C (95.5%25 identity in 550 aa overlap). Also similar to SW:QCRB_BACST cytochrome B subunit from Bacillus stearothermophilus (224 aa) fasta scores%3B opt: 409%2C z-score: 451.8%2C E(): 7.2e-18%2C (30.0%25 identity in 240 aa overlap). Contains Pfam match to entry PF00033 cytochrome_b_N%2C Cytochrome b(N-terminal)/b6/petB. Also contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=qcrB;product=cytochrome B subunit;protein_id=NP_626404.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2310959	2311630	.	-	.	ID=id2659;Dbxref=GeneID:1097582;Note=Pfam match to entry PF00033 cytochrome_b_N%2C Cytochrome b(N-terminal)/b6/petB%2C score 62.10%2C E-value 1.2e-14.;gbkey=misc_feature;gene=qcrB
NC_003888.3	RefSeq	gene	2311681	2312742	.	-	.	ID=gene2150;Dbxref=GeneID:1097583;Name=qcrA;gbkey=Gene;gene=qcrA;gene_biotype=protein_coding;gene_synonym=qcrA,SC6G10.22c;locus_tag=SCO2149
NC_003888.3	RefSeq	CDS	2311681	2312742	.	-	0	ID=cds2113;Parent=gene2150;Dbxref=Genbank:NP_626405.1,GeneID:1097583;Name=NP_626405.1;Note=SC6G10.22c%2C qcrA%2C Rieske iron-sulfur protein%2C len: 353 aa%3B identical over the partial sequence of QcrA%2C Rieske iron-sulfur protein from Streptomyces lividans (170 aa) fasta scores%3B opt: 1174%2C z-score: 1332.%2C1 E(): 0%2C (100.0%25 identity in 169 aa overlap). SW:UCRI_BRAJA ubiquinol cytochrome C reductase iron-sulphur subunit (176 aa) fasta scores%3B opt: 156%2C z-score: 186.0%2C E(): 0.0047%2C (33.3%25 identity in 84 aa overlap). Contains Prosite match to PS00200 Rieske iron-sulfur protein signature 2 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=qcrA;product=Rieske iron-sulfur protein;protein_id=NP_626405.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2311834	2311851	.	-	.	ID=id2660;Dbxref=GeneID:1097583;Note=PS00200 Rieske iron-sulfur protein signature 2.;gbkey=misc_feature;gene=qcrA
NC_003888.3	RefSeq	gene	2312739	2313548	.	-	.	ID=gene2151;Dbxref=GeneID:1097584;Name=qcrC;gbkey=Gene;gene=qcrC;gene_biotype=protein_coding;gene_synonym=qcrC,SC6G10.23c;locus_tag=SCO2150
NC_003888.3	RefSeq	CDS	2312739	2313548	.	-	0	ID=cds2114;Parent=gene2151;Dbxref=Genbank:NP_626406.1,GeneID:1097584;Name=NP_626406.1;Note=SC6G10.23c%2C qcrC%2C cytochrome C heme-binding subunit%2C len: aa%3B similar to many eg. TR:O69583 (EMBL:AL022602) proposed QcrC protein from Mycobacterium leprae (164 aa) fasta scores%3B opt: 368%2C z-score: 374.3%2C E(): 1.5e-13%2C (45.4%25 identity in 141 aa overlap). Contains two Pfam matches to entry PF00034 cytochrome_c%2C Cytochrome c and two Prosite matches to PS00190 Cytochrome c family heme-binding site signature. Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=qcrC;product=cytochrome C heme-binding subunit;protein_id=NP_626406.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2312889	2313125	.	-	.	ID=id2661;Dbxref=GeneID:1097584;Note=Pfam match to entry PF00034 cytochrome_c%2C Cytochrome c%2C score 40.20%2C E-value 4.6e-08.;gbkey=misc_feature;gene=qcrC
NC_003888.3	RefSeq	sequence_feature	2313069	2313086	.	-	.	ID=id2662;Dbxref=GeneID:1097584;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=qcrC
NC_003888.3	RefSeq	sequence_feature	2313171	2313404	.	-	.	ID=id2663;Dbxref=GeneID:1097584;Note=Pfam match to entry PF00034 cytochrome_c%2C Cytochrome c%2C score 28.60%2C E-value 0.00014.;gbkey=misc_feature;gene=qcrC
NC_003888.3	RefSeq	sequence_feature	2313354	2313371	.	-	.	ID=id2664;Dbxref=GeneID:1097584;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=qcrC
NC_003888.3	RefSeq	gene	2313623	2314243	.	-	.	ID=gene2152;Dbxref=GeneID:1097585;Name=cox3;gbkey=Gene;gene=cox3;gene_biotype=protein_coding;gene_synonym=cox3,SC6G10.24c;locus_tag=SCO2151
NC_003888.3	RefSeq	CDS	2313623	2314243	.	-	0	ID=cds2115;Parent=gene2152;Dbxref=Genbank:NP_626407.1,GeneID:1097585;Name=NP_626407.1;Note=SC6G10.24c%2C cox3%2C cytochrome c oxidase subunit III%2C len: 206aa%3B similar to many eg. SW:COX3_BACP3 caaC%2C cytochrome c oxidase subunit III from Bacillus PS3 (207 aa) fasta scores%3B opt: 397%2C z-score: 511.9%2C E(): 3.3e-21%2C (35.9%25 identity in 181 aa overlap). Contains Pfam match to entry PF00510 COX3%2C Cytochrome c oxidase subunit III.;gbkey=CDS;gene=cox3;product=cytochrome c oxidase subunit III;protein_id=NP_626407.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2313632	2314243	.	-	.	ID=id2665;Dbxref=GeneID:1097585;Note=Pfam match to entry PF00510 COX3%2C Cytochrome c oxidase subunit III%2C score -112.10%2C E-value 8.9e-07.;gbkey=misc_feature;gene=cox3
NC_003888.3	RefSeq	gene	2314453	2314854	.	+	.	ID=gene2153;Dbxref=GeneID:1097586;Name=SC6G10.25;gbkey=Gene;gene=SC6G10.25;gene_biotype=protein_coding;gene_synonym=SC6G10.25;locus_tag=SCO2152
NC_003888.3	RefSeq	CDS	2314453	2314854	.	+	0	ID=cds2116;Parent=gene2153;Dbxref=Genbank:NP_626408.1,GeneID:1097586;Name=NP_626408.1;Note=SC6G10.25%2C possible response regulator%2C len: 133aa%3B similar to TR:P95183 (EMBL:Z83867) hypothetical protein from Mycobacterium tuberculosis (133 aa) fasta scores%3B opt: 474%2C z-score: 602.8%2C E(): 2.8e-26%2C (54.2%25 identity in 120 aa overlap) and TR:E1358527 (EMBL:AJ131213) response regulator from Streptomyces coelicolor (234 aa) fasta scores%3B opt: 122%2C z-score: 162.8%2C E(): 0.091%2C (28.5%25 identity in 130 aa overlap);gbkey=CDS;gene=SC6G10.25;product=response regulator;protein_id=NP_626408.1;transl_table=11
NC_003888.3	RefSeq	gene	2314942	2316216	.	-	.	ID=gene2154;Dbxref=GeneID:1097587;Name=SC6G10.26c;gbkey=Gene;gene=SC6G10.26c;gene_biotype=protein_coding;gene_synonym=SC6G10.26c;locus_tag=SCO2153
NC_003888.3	RefSeq	CDS	2314942	2316216	.	-	0	ID=cds2117;Parent=gene2154;Dbxref=Genbank:NP_626409.1,GeneID:1097587;Name=NP_626409.1;Note=SC6G10.26c%2C possible hypothetical protein%2C len: 424aa%3B similar to many of undefined function eg. TR:O53223 (EMBL:AL021185) hypothetical protein from Mycobacterium tuberculosis (408 aa) fasta scores%3B opt: 867%2C z-score: 941.5%2C E(): 0%2C (35.2%25 identity in 403 aa overlap). Contains Prosite matches to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and PS00213 Lipocalin signature. Also contains possible N-terminal signal sequence.;gbkey=CDS;gene=SC6G10.26c;product=hypothetical protein;protein_id=NP_626409.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2315620	2315658	.	-	.	ID=id2666;Dbxref=GeneID:1097587;Note=PS00213 Lipocalin signature.;gbkey=misc_feature;gene=SC6G10.26c
NC_003888.3	RefSeq	sequence_feature	2316124	2316156	.	-	.	ID=id2667;Dbxref=GeneID:1097587;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SC6G10.26c
NC_003888.3	RefSeq	stem_loop	2316289	2316334	.	+	.	ID=id2668;Note=Imperfect inverted repeat%2C 20/21 ( 95%25) matches%2C with 4 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2316363	2316761	.	-	.	ID=gene2155;Dbxref=GeneID:1097588;Name=SC6G10.27c;gbkey=Gene;gene=SC6G10.27c;gene_biotype=protein_coding;gene_synonym=SC6G10.27c;locus_tag=SCO2154
NC_003888.3	RefSeq	CDS	2316363	2316761	.	-	0	ID=cds2118;Parent=gene2155;Dbxref=Genbank:NP_626410.1,GeneID:1097588;Name=NP_626410.1;Note=SC6G10.27c%2C possible integral membrane protein%2C len: 132aa%3B similar to proteins of undefined function eg. SW:Y00A_MYCTU hypothetical protein from Mycobacterium tuberculosis (139 aa) fasta scores%3B opt: 317%2C z-score: 403.3%2C E(): 3.7e-15%2C (38.3%25 identity in 133 aa overlap).;gbkey=CDS;gene=SC6G10.27c;product=hypothetical protein;protein_id=NP_626410.1;transl_table=11
NC_003888.3	RefSeq	gene	2316758	2318494	.	-	.	ID=gene2156;Dbxref=GeneID:1097589;Name=cox1;gbkey=Gene;gene=cox1;gene_biotype=protein_coding;gene_synonym=cox1,SC6G10.28c;locus_tag=SCO2155
NC_003888.3	RefSeq	CDS	2316758	2318494	.	-	0	ID=cds2119;Parent=gene2156;Dbxref=Genbank:NP_626411.1,GeneID:1097589;Name=NP_626411.1;Note=SC6G10.28c%2C cox1%2C cytochrome c oxidase subunit I%2C len: 578aa%3B similar to many eg. SW:COX1_BACFI cytochrome c oxidase polypeptide I from Bacillus firmus (624 aa) fasta scores%3B opt: 1835%2C z-score: 2056.2%2C E(): 0%2C (49.5%25 identity in 527 aa overlap). Contains Pfam match to entry PF00115 COX1%2C Cytochrome C and Quinol oxidase polypeptide I and Prosite matches to PS00152 ATP synthase alpha and beta subunits signature and PS00077 Heme-copper oxidase catalytic subunit%2C copper B binding region signature. Also contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=cox1;product=cytochrome c oxidase subunit I;protein_id=NP_626411.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2317031	2318395	.	-	.	ID=id2669;Dbxref=GeneID:1097589;Note=Pfam match to entry PF00115 COX1%2C Cytochrome C and Quinol oxidase polypeptide I%2C score 747.60%2C E-value 5.1e-221.;gbkey=misc_feature;gene=cox1
NC_003888.3	RefSeq	sequence_feature	2317310	2317339	.	-	.	ID=id2670;Dbxref=GeneID:1097589;Note=PS00152 ATP synthase alpha and beta subunits signature.;gbkey=misc_feature;gene=cox1
NC_003888.3	RefSeq	sequence_feature	2317541	2317705	.	-	.	ID=id2671;Dbxref=GeneID:1097589;Note=PS00077 Heme-copper oxidase catalytic subunit%2C copper B binding region signature.;gbkey=misc_feature;gene=cox1
NC_003888.3	RefSeq	gene	2318491	2319450	.	-	.	ID=gene2157;Dbxref=GeneID:1097590;Name=cox;gbkey=Gene;gene=cox;gene_biotype=protein_coding;gene_synonym=cox,SC6G10.29c;locus_tag=SCO2156
NC_003888.3	RefSeq	CDS	2318491	2319450	.	-	0	ID=cds2120;Parent=gene2157;Dbxref=Genbank:NP_626412.1,GeneID:1097590;Name=NP_626412.1;Note=SC6G10.29c%2C cox2%2C cytochrome c oxidase subunit II%2C len: 319aa%3B similar to many eg. SW:COX2_MYCTU cox2%2C  cytochrome c oxidase subunit II from Mycobacterium tuberculosis (363 aa) fasta scores%3B opt: 417%2C z-score: 477.1%2C E(): 2.8e-19%2C (35.4%25 identity in 308 aa overlap). Contains two Pfam match to entry PF00116 COX2%2C Cytochrome C oxidase subunit II and Prosite match to PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature.;gbkey=CDS;gene=cox;product=cytochrome c oxidase subunit II;protein_id=NP_626412.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2318587	2318823	.	-	.	ID=id2672;Dbxref=GeneID:1097590;Note=Pfam match to entry PF00116 COX2%2C Cytochrome C oxidase subunit II%2C score 62.60%2C E-value 3e-16.;gbkey=misc_feature;gene=cox
NC_003888.3	RefSeq	sequence_feature	2318632	2318778	.	-	.	ID=id2673;Dbxref=GeneID:1097590;Note=PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature.;gbkey=misc_feature;gene=cox
NC_003888.3	RefSeq	sequence_feature	2319004	2319069	.	-	.	ID=id2674;Dbxref=GeneID:1097590;Note=Pfam match to entry PF00116 COX2%2C Cytochrome C oxidase subunit II%2C score 3.70%2C E-value 6.6.;gbkey=misc_feature;gene=cox
NC_003888.3	RefSeq	gene	2319777	2321159	.	+	.	ID=gene2158;Dbxref=GeneID:1097591;Name=SC6G10.30;gbkey=Gene;gene=SC6G10.30;gene_biotype=protein_coding;gene_synonym=SC6G10.30;locus_tag=SCO2157
NC_003888.3	RefSeq	CDS	2319777	2321159	.	+	0	ID=cds2121;Parent=gene2158;Dbxref=Genbank:NP_626413.1,GeneID:1097591;Name=NP_626413.1;Note=SC6G10.30%2C probable aminotransferase%2C len: 460 aa%3B similar to many NifS-like proteins e.g. SW:NIFS_RHOSH NifS protein from Rhodobacter sphaeroides (387 aa) fasta scores%3B opt: 702%2C z-score: 760.5%2C E(): 0%2C (37.4%25 identity in 390 aa overlap). Contains Pfam matches to entry PF00266 aminotran_5%2C Aminotransferases class-V and entry PF01206 UPF0033%2C Uncharacterized protein family UPF0033.;gbkey=CDS;gene=SC6G10.30;product=aminotransferase;protein_id=NP_626413.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2319810	2320850	.	+	.	ID=id2675;Dbxref=GeneID:1097591;Note=Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V%2C score 172.80%2C E-value 5.8e-48.;gbkey=misc_feature;gene=SC6G10.30
NC_003888.3	RefSeq	sequence_feature	2320929	2321150	.	+	.	ID=id2676;Dbxref=GeneID:1097591;Note=Pfam match to entry PF01206 UPF0033%2C Uncharacterized protein family UPF0033%2C score 24.30%2C E-value 5.3e-05.;gbkey=misc_feature;gene=SC6G10.30
NC_003888.3	RefSeq	gene	2321282	2322298	.	-	.	ID=gene2159;Dbxref=GeneID:1097592;Name=SC6G10.31c;gbkey=Gene;gene=SC6G10.31c;gene_biotype=protein_coding;gene_synonym=SC6G10.31c;locus_tag=SCO2158
NC_003888.3	RefSeq	CDS	2321282	2322298	.	-	0	ID=cds2122;Parent=gene2159;Dbxref=Genbank:NP_626414.1,GeneID:1097592;Name=NP_626414.1;Note=SC6G10.31c%2C probable kinase%2C len: 338 aa%3B similar to many e.g. SW:RBSK_BACSU ribokinase from Bacillus subtilis (293 aa) fasta scores%3B opt: 222%2C z-score: 264.5%2C E(): 2e-07%2C (26.6%25 identity in 252 aa overlap). Contains Prosite matches to PS00583 pfkB family of carbohydrate kinases signature 1 and PS00485 Adenosine and AMP deaminase signature.;gbkey=CDS;gene=SC6G10.31c;product=kinase;protein_id=NP_626414.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2321810	2321830	.	-	.	ID=id2677;Dbxref=GeneID:1097592;Note=PS00485 Adenosine and AMP deaminase signature.;gbkey=misc_feature;gene=SC6G10.31c
NC_003888.3	RefSeq	sequence_feature	2322044	2322118	.	-	.	ID=id2678;Dbxref=GeneID:1097592;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;gbkey=misc_feature;gene=SC6G10.31c
NC_003888.3	RefSeq	gene	2322389	2322598	.	+	.	ID=gene2160;Dbxref=GeneID:1097593;Name=SC6G10.32;gbkey=Gene;gene=SC6G10.32;gene_biotype=protein_coding;gene_synonym=SC6G10.32;locus_tag=SCO2159
NC_003888.3	RefSeq	CDS	2322389	2322598	.	+	0	ID=cds2123;Parent=gene2160;Dbxref=Genbank:NP_626415.1,GeneID:1097593;Name=NP_626415.1;Note=SC6G10.32%2C unknown%2C len: 69aa;gbkey=CDS;gene=SC6G10.32;product=hypothetical protein;protein_id=NP_626415.1;transl_table=11
NC_003888.3	RefSeq	gene	2322715	2324265	.	+	.	ID=gene2161;Dbxref=GeneID:1097594;Name=SC6G10.33;gbkey=Gene;gene=SC6G10.33;gene_biotype=protein_coding;gene_synonym=SC6G10.33;locus_tag=SCO2160
NC_003888.3	RefSeq	CDS	2322715	2324265	.	+	0	ID=cds2124;Parent=gene2161;Dbxref=Genbank:NP_626416.1,GeneID:1097594;Name=NP_626416.1;Note=SC6G10.33%2C possible large membrane protein%2C len: 516 aa%3B contains possible hydrophobic membrane spanning region near the N-terminal domain;gbkey=CDS;gene=SC6G10.33;product=large membrane protein;protein_id=NP_626416.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	2324286	2324328	.	+	.	ID=id2679;Note=Perfect inverted repeat%2C 19/19 (100%25) matches%2C 5 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2324368	2324724	.	-	.	ID=gene2162;Dbxref=GeneID:1097595;Name=SC6G10.34c;gbkey=Gene;gene=SC6G10.34c;gene_biotype=protein_coding;gene_synonym=SC6G10.34c;locus_tag=SCO2161
NC_003888.3	RefSeq	CDS	2324368	2324724	.	-	0	ID=cds2125;Parent=gene2162;Dbxref=Genbank:NP_626417.1,GeneID:1097595;Name=NP_626417.1;Note=SC6G10.34c%2C conserved hypothetical protein%2C len: 118 aa%3B similar to many e.g. SW:YM04_MYCTU (EMBL:Z70283) protein RV2204c from Mycobacterium tuberculosis (118 aa) fasta scores%3B opt: 625%2C z-score: 766.6%2C E(): 0%2C (74.6%25 identity in 118 aa overlap). Contains PS01152 Hypothetical hesB/yadR/yfhF family signature;gbkey=CDS;gene=SC6G10.34c;product=hypothetical protein;protein_id=NP_626417.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2324374	2324427	.	-	.	ID=id2680;Dbxref=GeneID:1097595;Note=PS01152 Hypothetical hesB/yadR/yfhF family signature.;gbkey=misc_feature;gene=SC6G10.34c
NC_003888.3	RefSeq	gene	2325064	2326248	.	+	.	ID=gene2163;Dbxref=GeneID:1097596;Name=SC6G10.35;gbkey=Gene;gene=SC6G10.35;gene_biotype=protein_coding;gene_synonym=SC6G10.35;locus_tag=SCO2162
NC_003888.3	RefSeq	CDS	2325064	2326248	.	+	0	ID=cds2126;Parent=gene2163;Dbxref=Genbank:NP_733560.1,GeneID:1097596;Name=NP_733560.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;gene=SC6G10.35;product=quinolinate synthetase;protein_id=NP_733560.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2325412	2326242	.	+	.	ID=id2681;Dbxref=GeneID:1097596;Note=Pfam match to entry PF02445 NadA%2C %2C score 218.90%2C E-value 7.7e-62;gbkey=misc_feature;gene=SC6G10.35
NC_003888.3	RefSeq	gene	2326327	2329452	.	-	.	ID=gene2164;Dbxref=GeneID:1097597;Name=SC5F7.37c;gbkey=Gene;gene=SC5F7.37c;gene_biotype=protein_coding;gene_synonym=SC5F7.37c,St6G10A.02c;locus_tag=SCO2164
NC_003888.3	RefSeq	CDS	2326327	2329452	.	-	0	ID=cds2127;Parent=gene2164;Dbxref=Genbank:NP_733561.1,GeneID:1097597;Name=NP_733561.1;Note=SC5F7.37c%2C possible integral membrane efflux protein%2C len: >822aa%3B similar to SW:ACRD_ECOLI acriflavin resistance efflux protein from Escherichia coli (1037 aa) fasta scores%3B opt: 628%2C z-score: 629.0%2C E(): 1.1e-27%2C (22.9%25 identity in 853 aa overlap). Also similar to TR:O31501 (EMBL:Z99107) hypothetical protein from Bacillus subtilis (1065 aa) fasta scores%3B opt: 968%2C z-score: 969.5%2C E(): 0%2C (29.4%25 identity in 874 aa overlap). Contains Pfam match to entry PF00873 ACR_tran%2C AcrB/AcrD/AcrF family. Also contains possible membrane spanning hydrophobic regions.~SC6G10A.02c%2C possible integral membrane efflux protein (fragment)%2C len: >253 aa%3B similar to C-terminal region of SW:CZCA_ALCSP (EMBL:D67044) Alcaligenes sp. cation efflux system protein CzcA%2C 1063 aa%3B fasta scores: opt: 474 z-score: 507.7 E(): 7.7e-21%3B 34.6%25 identity in 246 aa overlap. Contains Pfam match to entry PF00873 ACR_tran%2C AcrB/AcrD/AcrF family. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5F7.37c;product=integral membrane efflux protein;protein_id=NP_733561.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2326432	2327088	.	-	.	ID=id2682;Dbxref=GeneID:1097597;Note=Pfam match to entry PF00873 ACR_tran%2C AcrB/AcrD/AcrF family%2C score 236.50%2C E-value 3.9e-67;gbkey=misc_feature;gene=SC5F7.37c
NC_003888.3	RefSeq	sequence_feature	2327635	2329443	.	-	.	ID=id2683;Dbxref=GeneID:1097597;Note=Pfam match to entry PF00873 ACR_tran%2C AcrB/AcrD/AcrF family%2C score 458.00%2C E-value 7.7e-134.;gbkey=misc_feature;gene=SC5F7.37c
NC_003888.3	RefSeq	gene	2329632	2330315	.	-	.	ID=gene2165;Dbxref=GeneID:1097598;Name=SC5F7.36c;gbkey=Gene;gene=SC5F7.36c;gene_biotype=protein_coding;gene_synonym=SC5F7.36c;locus_tag=SCO2165
NC_003888.3	RefSeq	CDS	2329632	2330315	.	-	0	ID=cds2128;Parent=gene2165;Dbxref=Genbank:NP_626418.1,GeneID:1097598;Name=NP_626418.1;Note=SC5F7.36c%2C probable two component system response regulator%2C len: 227 aa%3B similar to many others from Streptomyces coelicolor egs. TR:O69816 (EMBL:AL023496) proposed two component regulator (224 aa) fasta scores%3B opt: 753%2C z-score: 882.2%2C E(): 0%2C (57.4%25 identity in 223 aa overlap) and TR:Q53894 (EMBL:U51332) AbsA2 two component response regulator of antibiotic synthesis (222 aa) fasta scores%3B opt: 564%2C z-score: 663.8%2C E(): 1.2e-29%2C (44.6%25 identity in 222 aa overlap). Contains Prosite match to PS00622 Bacterial regulatory proteins%2C luxR family signature and Pfam matches to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and to entry PF00072 response_reg%2C Response regulator receiver domain.Contains helix-turn-helix motif (+2.94 SD) 178-199aa.;gbkey=CDS;gene=SC5F7.36c;product=two component system response regulator;protein_id=NP_626418.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2329644	2329841	.	-	.	ID=id2684;Dbxref=GeneID:1097598;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 80.90%2C E-value 2.7e-20.;gbkey=misc_feature;gene=SC5F7.36c
NC_003888.3	RefSeq	sequence_feature	2329707	2329790	.	-	.	ID=id2685;Dbxref=GeneID:1097598;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=SC5F7.36c
NC_003888.3	RefSeq	sequence_feature	2329962	2330309	.	-	.	ID=id2686;Dbxref=GeneID:1097598;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 131.40%2C E-value 1.6e-35.;gbkey=misc_feature;gene=SC5F7.36c
NC_003888.3	RefSeq	gene	2330312	2331562	.	-	.	ID=gene2166;Dbxref=GeneID:1097599;Name=SC5F7.35c;gbkey=Gene;gene=SC5F7.35c;gene_biotype=protein_coding;gene_synonym=SC5F7.35c;locus_tag=SCO2166
NC_003888.3	RefSeq	CDS	2330312	2331562	.	-	0	ID=cds2129;Parent=gene2166;Dbxref=Genbank:NP_626419.1,GeneID:1097599;Name=NP_626419.1;Note=SC5F7.35c%2C probable two component sensor kinase%2C len: 416 aa%3B similar to many others from Streptomyces coelicolor egs. TR:CAB40930 (EMBL:AL049630) two component sensor kinase (401 aa) fasta scores%3B opt: 731%2C z-score: 799.1%2C E(): 0%2C (36.7%25 identity in 398 aa overlap) and TR:Q53893 (EMBL:U51332) two component sensor kinase for the regulation of antibiotic production (571 aa) fasta scores%3B opt: 429%2C z-score: 469.2%2C E(): 8.4e-19%2C (29.5%25 identity in 407 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC5F7.35c;product=two component sensor kinase;protein_id=NP_626419.1;transl_table=11
NC_003888.3	RefSeq	gene	2331727	2332011	.	-	.	ID=gene2167;Dbxref=GeneID:1097600;Name=SC5F7.34c;gbkey=Gene;gene=SC5F7.34c;gene_biotype=protein_coding;gene_synonym=SC5F7.34c;locus_tag=SCO2167
NC_003888.3	RefSeq	CDS	2331727	2332011	.	-	0	ID=cds2130;Parent=gene2167;Dbxref=Genbank:NP_626420.1,GeneID:1097600;Name=NP_626420.1;Note=SC5F7.34c%2C unknown%2C len: aa;gbkey=CDS;gene=SC5F7.34c;product=hypothetical protein;protein_id=NP_626420.1;transl_table=11
NC_003888.3	RefSeq	gene	2332033	2332812	.	-	.	ID=gene2168;Dbxref=GeneID:1097601;Name=SC5F7.33c;gbkey=Gene;gene=SC5F7.33c;gene_biotype=protein_coding;gene_synonym=SC5F7.33c;locus_tag=SCO2168
NC_003888.3	RefSeq	CDS	2332033	2332812	.	-	0	ID=cds2131;Parent=gene2168;Dbxref=Genbank:NP_626421.1,GeneID:1097601;Name=NP_626421.1;Note=SC5F7.33c%2C unknown%2C possible hydrophilic protein%2C len: 259aa%3B some similartity to others of undefined function eg. SW:Y617_SYNY3 hypothetical protein from Synechocystis sp. strain PCC6803 (267 aa) fasta scores%3B opt: 313%2C z-score: 322.8%2C E(): 1.2e-10%2C (30.6%25 identity in 232 aa overlap). Contains probable coiled coil regions approx. 35-55aa and 45-110aa.;gbkey=CDS;gene=SC5F7.33c;product=hypothetical protein;protein_id=NP_626421.1;transl_table=11
NC_003888.3	RefSeq	gene	2332994	2333749	.	+	.	ID=gene2169;Dbxref=GeneID:1097602;Name=SC5F7.32;gbkey=Gene;gene=SC5F7.32;gene_biotype=protein_coding;gene_synonym=SC5F7.32;locus_tag=SCO2169
NC_003888.3	RefSeq	CDS	2332994	2333749	.	+	0	ID=cds2132;Parent=gene2169;Dbxref=Genbank:NP_626422.1,GeneID:1097602;Name=NP_626422.1;Note=SC5F7.32%2C possible integral membrane protein%2C len: 251aa%3B contains possible membrane spanning hydrophobic regions. some similarity to TR:O32952 (EMBL:Z98741) hypothetical protein from Mycobacterium leprae (247 aa) fasta scores%3B opt: 335%2C z-score: 361.2%2C E(): 8.8e-13%2C (34.4%25 identity in 221 aa overlap).;gbkey=CDS;gene=SC5F7.32;product=hypothetical protein;protein_id=NP_626422.1;transl_table=11
NC_003888.3	RefSeq	gene	2333833	2334534	.	+	.	ID=gene2170;Dbxref=GeneID:1097603;Name=SC5F7.31;gbkey=Gene;gene=SC5F7.31;gene_biotype=protein_coding;gene_synonym=SC5F7.31;locus_tag=SCO2170
NC_003888.3	RefSeq	CDS	2333833	2334534	.	+	0	ID=cds2133;Parent=gene2170;Dbxref=Genbank:NP_626423.1,GeneID:1097603;Name=NP_626423.1;Note=SC5F7.31%2C possible methyltransferase%2C len: 233 aa%3B similar to SW:SMTA_ECOLI methyltransferase from Escherichia coli (261 aa) fasta scores%3B opt: 301%2C z-score: 359.0%2C E(): 1.2e-12%2C (31.1%25 identity in 212 aa overlap).;gbkey=CDS;gene=SC5F7.31;product=methyltransferase;protein_id=NP_626423.1;transl_table=11
NC_003888.3	RefSeq	gene	2334636	2335724	.	+	.	ID=gene2171;Dbxref=GeneID:1097604;Name=SC5F7.30;gbkey=Gene;gene=SC5F7.30;gene_biotype=protein_coding;gene_synonym=SC5F7.30;locus_tag=SCO2171
NC_003888.3	RefSeq	CDS	2334636	2335724	.	+	0	ID=cds2134;Parent=gene2171;Dbxref=Genbank:NP_626424.1,GeneID:1097604;Name=NP_626424.1;Note=SC5F7.30%2C probable  protease%2C len: 362aa%3B similar to many egs. SW:HTRA_ECOLI Protease Do from Escherichia coli (474 aa) fasta scores%3B opt: 505%2C z-score: 503.1%2C E(): 1.1e-20%2C (39.1%25 identity in 294 aa overlap). Contains possible membrane spanning hydrophobic regions. Also contains Pfam matches to entry PF00089 trypsin%2C Trypsin and to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF).;gbkey=CDS;gene=SC5F7.30;product=protease;protein_id=NP_626424.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2334825	2335412	.	+	.	ID=id2687;Dbxref=GeneID:1097604;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score -0.30%2C E-value 0.00012.;gbkey=misc_feature;gene=SC5F7.30
NC_003888.3	RefSeq	sequence_feature	2335434	2335682	.	+	.	ID=id2688;Dbxref=GeneID:1097604;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF).%2C score 42.60%2C E-value 8.8e-09.;gbkey=misc_feature;gene=SC5F7.30
NC_003888.3	RefSeq	gene	2335755	2336003	.	-	.	ID=gene2172;Dbxref=GeneID:1097605;Name=SC5F7.29c;gbkey=Gene;gene=SC5F7.29c;gene_biotype=protein_coding;gene_synonym=SC5F7.29c;locus_tag=SCO2172
NC_003888.3	RefSeq	CDS	2335755	2336003	.	-	0	ID=cds2135;Parent=gene2172;Dbxref=Genbank:NP_626425.1,GeneID:1097605;Name=NP_626425.1;Note=SC5F7.29c%2C unknown%2C len: 82aa;gbkey=CDS;gene=SC5F7.29c;product=hypothetical protein;protein_id=NP_626425.1;transl_table=11
NC_003888.3	RefSeq	gene	2336218	2337411	.	+	.	ID=gene2173;Dbxref=GeneID:1097606;Name=SC5F7.28;gbkey=Gene;gene=SC5F7.28;gene_biotype=protein_coding;gene_synonym=SC5F7.28;locus_tag=SCO2173
NC_003888.3	RefSeq	CDS	2336218	2337411	.	+	0	ID=cds2136;Parent=gene2173;Dbxref=Genbank:NP_626426.1,GeneID:1097606;Name=NP_626426.1;Note=SC5F7.28%2C adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase%2C len: 397 aa%3B regions similar to different proteins. 1-220aa similar to TR:O05479 (EMBL:M86351) triacylglycerol acylhydrolase from Streptomyces sp. (481 aa) fasta scores%3B opt: 146%2C z-score: 158.6%2C E(): 0.17%2C (30.4%25 identity in 207 aa overlap). 220-397aa similar to many bifunctional adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferases in the biosynthesis of cobalamin (vitamin B12) eg. SW:COBU_SALTY adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase from Salmonella typhimurium (181 aa) fasta scores%3B opt: 368%2C z-score: 398.3%2C E(): 7.5e-15%2C (41.7%25 identity in 175 aa overlap).;gbkey=CDS;gene=SC5F7.28;product=adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase;protein_id=NP_626426.1;transl_table=11
NC_003888.3	RefSeq	gene	2337400	2338170	.	-	.	ID=gene2174;Dbxref=GeneID:1097607;Name=SC5F7.27c;gbkey=Gene;gene=SC5F7.27c;gene_biotype=protein_coding;gene_synonym=SC5F7.27c;locus_tag=SCO2174
NC_003888.3	RefSeq	CDS	2337400	2338170	.	-	0	ID=cds2137;Parent=gene2174;Dbxref=Genbank:NP_626427.1,GeneID:1097607;Name=NP_626427.1;Note=SC5F7.27c%2C possible transferase%2C len: 256 aa%3B region (120-210aa) similar to SW:UBIG_SALTY 3-demethylubiquinone-9 3-methyltransferase from Salmonella typhimurium (209 aa) fasta scores%3B opt: 142%2C z-score: 165.2%2C E(): 0.073%2C (31.6%25 identity in 98 aa overlap);gbkey=CDS;gene=SC5F7.27c;product=transferase;protein_id=NP_626427.1;transl_table=11
NC_003888.3	RefSeq	gene	2338274	2339347	.	+	.	ID=gene2175;Dbxref=GeneID:1097608;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;gene_synonym=SC5F7.26;locus_tag=SCO2175
NC_003888.3	RefSeq	CDS	2338274	2339347	.	+	0	ID=cds2138;Parent=gene2175;Dbxref=Genbank:NP_626428.1,GeneID:1097608;Name=NP_626428.1;Note=catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole;gbkey=CDS;gene=cobT;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=NP_626428.1;transl_table=11
NC_003888.3	RefSeq	gene	2339770	2340510	.	-	.	ID=gene2176;Dbxref=GeneID:1097609;Name=SC5F7.25c;gbkey=Gene;gene=SC5F7.25c;gene_biotype=protein_coding;gene_synonym=SC5F7.25c;locus_tag=SCO2176
NC_003888.3	RefSeq	CDS	2339770	2340510	.	-	0	ID=cds2139;Parent=gene2176;Dbxref=Genbank:NP_626429.1,GeneID:1097609;Name=NP_626429.1;Note=SC5F7.25c%2C possible integral membrane protein%2C len: 246 aa%3B similar to TR:O53514 (EMBL:AL021957) integral membrane protein from Mycobacterium tuberculosis (295 aa) fasta scores%3B opt: 468%2C z-score: 539.2%2C E(): 1.1e-22%2C (42.3%25 identity in 260 aa overlap). Contains possible membrane spanning hydrophobic regions. Also contains Pfam match to entry PF00499 oxidored_q3%2C NADH-ubiquinone/plastoquinone oxidoreductase chain 6;gbkey=CDS;gene=SC5F7.25c;product=hypothetical protein;protein_id=NP_626429.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2339920	2340351	.	-	.	ID=id2689;Dbxref=GeneID:1097609;Note=Pfam match to entry PF00499 oxidored_q3%2C NADH-ubiquinone/plastoquinone oxidoreductase chain 6%2C score -66.80%2C E-value 0.52.;gbkey=misc_feature;gene=SC5F7.25c
NC_003888.3	RefSeq	gene	2340571	2341353	.	+	.	ID=gene2177;Dbxref=GeneID:1097610;Name=SC5F7.24;gbkey=Gene;gene=SC5F7.24;gene_biotype=protein_coding;gene_synonym=SC5F7.24;locus_tag=SCO2177
NC_003888.3	RefSeq	CDS	2340571	2341353	.	+	0	ID=cds2140;Parent=gene2177;Dbxref=Genbank:NP_626430.1,GeneID:1097610;Name=NP_626430.1;Note=SC5F7.24%2C possible cobalamin (5'-phosphate) synthase%2C len: 260 aa%3B similar to many e.g. SW:COBS_SALTY cobalamin (5'-phosphate) synthase from Salmonella typhimurium (247 aa) fasta scores%3B opt: 309%2C z-score: 331.0%2C E(): 4.2e-11%2C (34.0%25 identity in 247 aa overlap). Contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SC5F7.24;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=NP_626430.1;transl_table=11
NC_003888.3	RefSeq	gene	2341371	2342219	.	-	.	ID=gene2178;Dbxref=GeneID:1097611;Name=SC5F7.23c;gbkey=Gene;gene=SC5F7.23c;gene_biotype=protein_coding;gene_synonym=SC5F7.23c;locus_tag=SCO2178
NC_003888.3	RefSeq	CDS	2341371	2342219	.	-	0	ID=cds2141;Parent=gene2178;Dbxref=Genbank:NP_626431.1,GeneID:1097611;Name=NP_626431.1;Note=SC5F7.23c%2C possible endo alpha-1%2C4 polygalactosaminidase%2C possibly %2C len: 282 aa%3B similar to TR:Q52423 (EMBL:D14846) endo alpha-1%2C4 polygalactosaminidase from Pseudomonas sp.881 (294 aa) fasta scores%3B opt: 759%2C z-score: 748.2%2C E(): 0%2C (44.2%25 identity in 278 aa overlap). Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC5F7.23c;product=endo alpha-1%2C4 polygalactosaminidase;protein_id=NP_626431.1;transl_table=11
NC_003888.3	RefSeq	gene	2342474	2344027	.	+	.	ID=gene2179;Dbxref=GeneID:1097612;Name=SC5F7.22;gbkey=Gene;gene=SC5F7.22;gene_biotype=protein_coding;gene_synonym=SC5F7.22;locus_tag=SCO2179
NC_003888.3	RefSeq	CDS	2342474	2344027	.	+	0	ID=cds2142;Parent=gene2179;Dbxref=Genbank:NP_626432.1,GeneID:1097612;Name=NP_626432.1;Note=catalyzes the removal of N-terminal amino acids preferably leucine from various peptides;gbkey=CDS;gene=SC5F7.22;product=leucyl aminopeptidase;protein_id=NP_626432.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2342645	2343901	.	+	.	ID=id2690;Dbxref=GeneID:1097612;Note=Pfam match to entry PF00883 Peptidase_M17%2C Cytosol aminopeptidase family%2C score 489.60%2C E-value 2.5e-143.;gbkey=misc_feature;gene=SC5F7.22
NC_003888.3	RefSeq	sequence_feature	2343548	2343571	.	+	.	ID=id2691;Dbxref=GeneID:1097612;Note=PS00631 Cytosol aminopeptidase signature.;gbkey=misc_feature;gene=SC5F7.22
NC_003888.3	RefSeq	gene	2344272	2345732	.	+	.	ID=gene2180;Dbxref=GeneID:1097613;Name=pdhL;gbkey=Gene;gene=pdhL;gene_biotype=protein_coding;gene_synonym=pdhL,SC5F7.21;locus_tag=SCO2180
NC_003888.3	RefSeq	CDS	2344272	2345732	.	+	0	ID=cds2143;Parent=gene2180;Dbxref=Genbank:NP_626433.1,GeneID:1097613;Name=NP_626433.1;Note=E3 component of pyruvate complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;gene=pdhL;product=dihydrolipoamide dehydrogenase;protein_id=NP_626433.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2344374	2345723	.	+	.	ID=id2692;Dbxref=GeneID:1097613;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase class-I%2C score 440.00%2C E-value 2.1e-128.;gbkey=misc_feature;gene=pdhL
NC_003888.3	RefSeq	sequence_feature	2344470	2344502	.	+	.	ID=id2693;Dbxref=GeneID:1097613;Note=PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.;gbkey=misc_feature;gene=pdhL
NC_003888.3	RefSeq	gene	2345796	2347568	.	+	.	ID=gene2181;Dbxref=GeneID:1097614;Name=SC5F7.20;gbkey=Gene;gene=SC5F7.20;gene_biotype=protein_coding;gene_synonym=SC5F7.20,sucB;locus_tag=SCO2181
NC_003888.3	RefSeq	CDS	2345796	2347568	.	+	0	ID=cds2144;Parent=gene2181;Dbxref=Genbank:NP_626434.1,GeneID:1097614;Name=NP_626434.1;Note=SC5F7.20%2C sucB%2C possible dihydrolipoamide succinyltransferase%2C len: 590 aa%3B similar to many egs. TR:AAC23517 (EMBL:AF068740) dihydrolipoamide succinyltransferase from Pseudomonas ovalis (407 aa) fasta scores%3B opt: 847%2C z-score: 602.5%2C E(): 3.2e-26%2C (41.9%25 identity in 453 aa overlap) and SW:ODO2_MYCTU dihydrolipoamide succinyltransferase from Mycobacterium tuberculosis (553 aa) fasta scores%3B opt: 1232%2C z-score: 866.2%2C E(): 0%2C (56.2%25 identity in 596 aa overlap). Contains two Pfam matches to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C Pfam match to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain) and two Prosite matches to PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;gbkey=CDS;gene=SC5F7.20;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=NP_626434.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2345802	2346023	.	+	.	ID=id2694;Dbxref=GeneID:1097614;Note=Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C score 106.60%2C E-value 4.9e-28.;gbkey=misc_feature;gene=SC5F7.20
NC_003888.3	RefSeq	sequence_feature	2345874	2345963	.	+	.	ID=id2695;Dbxref=GeneID:1097614;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;gbkey=misc_feature;gene=SC5F7.20
NC_003888.3	RefSeq	sequence_feature	2346183	2346404	.	+	.	ID=id2696;Dbxref=GeneID:1097614;Note=Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C score 106.30%2C E-value 6e-28.;gbkey=misc_feature;gene=SC5F7.20
NC_003888.3	RefSeq	sequence_feature	2346255	2346344	.	+	.	ID=id2697;Dbxref=GeneID:1097614;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;gbkey=misc_feature;gene=SC5F7.20
NC_003888.3	RefSeq	sequence_feature	2346882	2347556	.	+	.	ID=id2698;Dbxref=GeneID:1097614;Note=Pfam match to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain)%2C score 259.90%2C E-value 3.3e-74.;gbkey=misc_feature;gene=SC5F7.20
NC_003888.3	RefSeq	gene	2347778	2348401	.	+	.	ID=gene2182;Dbxref=GeneID:1097615;Name=SC5F7.19;gbkey=Gene;gene=SC5F7.19;gene_biotype=protein_coding;gene_synonym=SC5F7.19;locus_tag=SCO2182
NC_003888.3	RefSeq	CDS	2347778	2348401	.	+	0	ID=cds2145;Parent=gene2182;Dbxref=Genbank:NP_626435.1,GeneID:1097615;Name=NP_626435.1;Note=SC5F7.19%2C possible gntR-family transcriptional regulator%2C len: 207aa%3B similar to many egs. SW:GNTR_BACSU gluconate operon transcriptional repressor (243 aa) fasta scores%3B opt: 192%2C z-score: 240.4%2C E(): 4.7e-06%2C (31.1%25 identity in 180 aa overlap) and TR:CAA22369 (EMBL:AL034443) transcriptional regulator from Streptomyces coelicolor (225 aa) fasta scores%3B opt: 242%2C z-score: 300.9%2C E(): 2e-09%2C (32.2%25 identity in 199 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family.;gbkey=CDS;gene=SC5F7.19;product=GntR family transcriptional regulator;protein_id=NP_626435.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2347814	2347990	.	+	.	ID=id2699;Dbxref=GeneID:1097615;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 52.00%2C E-value 1.7e-14.;gbkey=misc_feature;gene=SC5F7.19
NC_003888.3	RefSeq	gene	2348740	2351439	.	+	.	ID=gene2183;Dbxref=GeneID:1097616;Name=aceE1;gbkey=Gene;gene=aceE1;gene_biotype=protein_coding;gene_synonym=aceE1,SC5F7.18;locus_tag=SCO2183
NC_003888.3	RefSeq	CDS	2348740	2351439	.	+	0	ID=cds2146;Parent=gene2183;Dbxref=Genbank:NP_626436.1,GeneID:1097616;Name=NP_626436.1;Note=paralogs to the E1 component of pyruvate dehydrogenase subunit E1;gbkey=CDS;gene=aceE1;product=2-oxoacid dehydrogenase subunit E1;protein_id=NP_626436.1;transl_table=11
NC_003888.3	RefSeq	gene	2351510	2352493	.	+	.	ID=gene2184;Dbxref=GeneID:1097617;Name=SC5F7.17;gbkey=Gene;gene=SC5F7.17;gene_biotype=protein_coding;gene_synonym=SC5F7.17;locus_tag=SCO2184
NC_003888.3	RefSeq	CDS	2351510	2352493	.	+	0	ID=cds2147;Parent=gene2184;Dbxref=Genbank:NP_626437.1,GeneID:1097617;Name=NP_626437.1;Note=SC5F7.17%2C possible transcriptional regulator%2C len: 327aa%3B similar to TR:O34920 (EMBL:AF027868) transcriptional regulator from Bacillus subtilis (313 aa) fasta scores%3B opt: 319%2C z-score: 380.6%2C E(): 7.3e-14%2C (27.3%25 identity in 330 aa overlap). Contains helix-turn-helix motif (+4.15 SD) 20-41aa.;gbkey=CDS;gene=SC5F7.17;product=transcriptional regulator;protein_id=NP_626437.1;transl_table=11
NC_003888.3	RefSeq	gene	2352501	2352923	.	+	.	ID=gene2185;Dbxref=GeneID:1097618;Name=SC5F7.16;gbkey=Gene;gene=SC5F7.16;gene_biotype=protein_coding;gene_synonym=SC5F7.16;locus_tag=SCO2185
NC_003888.3	RefSeq	CDS	2352501	2352923	.	+	0	ID=cds2148;Parent=gene2185;Dbxref=Genbank:NP_626438.1,GeneID:1097618;Name=NP_626438.1;Note=SC5F7.16%2C unknown%2C len: 140aa;gbkey=CDS;gene=SC5F7.16;product=hypothetical protein;protein_id=NP_626438.1;transl_table=11
NC_003888.3	RefSeq	gene	2352920	2353624	.	+	.	ID=gene2186;Dbxref=GeneID:1097619;Name=SC5F7.15;gbkey=Gene;gene=SC5F7.15;gene_biotype=protein_coding;gene_synonym=SC5F7.15;locus_tag=SCO2186
NC_003888.3	RefSeq	CDS	2352920	2353624	.	+	0	ID=cds2149;Parent=gene2186;Dbxref=Genbank:NP_626439.1,GeneID:1097619;Name=NP_626439.1;Note=SC5F7.15%2C unknown%2C len: 234aa;gbkey=CDS;gene=SC5F7.15;product=hypothetical protein;protein_id=NP_626439.1;transl_table=11
NC_003888.3	RefSeq	gene	2353659	2354585	.	-	.	ID=gene2187;Dbxref=GeneID:1097620;Name=SC5F7.14c;gbkey=Gene;gene=SC5F7.14c;gene_biotype=protein_coding;gene_synonym=SC5F7.14c;locus_tag=SCO2187
NC_003888.3	RefSeq	CDS	2353659	2354585	.	-	0	ID=cds2150;Parent=gene2187;Dbxref=Genbank:NP_626440.1,GeneID:1097620;Name=NP_626440.1;Note=SC5F7.14c%2C unknown%2C len: 308aa%3B similar to TR:O86334 (EMBL:Z97188) from Mycobacterium tuberculosis (539 aa) fasta scores%3B opt: 472%2C z-score: 514.3%2C E(): 2.6e-21%2C (37.5%25 identity in 208 aa overlap);gbkey=CDS;gene=SC5F7.14c;product=hypothetical protein;protein_id=NP_626440.1;transl_table=11
NC_003888.3	RefSeq	gene	2355010	2355858	.	+	.	ID=gene2188;Dbxref=GeneID:1097621;Name=SC5F7.13;gbkey=Gene;gene=SC5F7.13;gene_biotype=protein_coding;gene_synonym=SC5F7.13;locus_tag=SCO2188
NC_003888.3	RefSeq	CDS	2355010	2355858	.	+	0	ID=cds2151;Parent=gene2188;Dbxref=Genbank:NP_626441.1,GeneID:1097621;Name=NP_626441.1;Note=SC5F7.13%2C possible peptidase (hypothetical protein)%2C len: 282 aa%3B similar to TR:CAB38504 (EMBL:AL035636) serine protease from Streptomyces coelicolor (385 aa) fasta scores%3B opt: 873%2C z-score: 979.4%2C E(): 0%2C (49.5%25 identity in 281 aa overlap). Contains a weak Pfam match to entry PF00089 trypsin%2C Trypsin. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F7.13;product=peptidase;protein_id=NP_626441.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2355283	2355813	.	+	.	ID=id2700;Dbxref=GeneID:1097621;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score -30.70%2C E-value 0.013.;gbkey=misc_feature;gene=SC5F7.13
NC_003888.3	RefSeq	gene	2355882	2356391	.	-	.	ID=gene2189;Dbxref=GeneID:1097622;Name=SC5F7.12c;gbkey=Gene;gene=SC5F7.12c;gene_biotype=protein_coding;gene_synonym=SC5F7.12c;locus_tag=SCO2189
NC_003888.3	RefSeq	CDS	2355882	2356391	.	-	0	ID=cds2152;Parent=gene2189;Dbxref=Genbank:NP_626442.1,GeneID:1097622;Name=NP_626442.1;Note=SC5F7.12c%2C possible acetyltransferase%2C len: 169 aa%3B similar to SW:PTCR_ALCFA phosphinothricin acetyltransferase from Alcaligenes faecalis (197 aa) fasta scores%3B opt: 178%2C z-score: 226.5%2C E(): 2.8e-05%2C (36.0%25 identity in 136 aa overlap) and TR:O33583 (EMBL:S60706) nourseothricin acetyltransferase from Streptomyces noursei (190 aa) fasta scores%3B opt: 140%2C z-score: 180.8%2C E(): 0.0098%2C (29.3%25 identity in 150 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SC5F7.12c;product=acetyltransferase;protein_id=NP_626442.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2355975	2356367	.	-	.	ID=id2701;Dbxref=GeneID:1097622;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 78.20%2C E-value 1.7e-19.;gbkey=misc_feature;gene=SC5F7.12c
NC_003888.3	RefSeq	gene	2356470	2357579	.	+	.	ID=gene2190;Dbxref=GeneID:1097623;Name=SC5F7.11;gbkey=Gene;gene=SC5F7.11;gene_biotype=protein_coding;gene_synonym=SC5F7.11;locus_tag=SCO2190
NC_003888.3	RefSeq	CDS	2356470	2357579	.	+	0	ID=cds2153;Parent=gene2190;Dbxref=Genbank:NP_626443.1,GeneID:1097623;Name=NP_626443.1;Note=SC5F7.11%2C unknown%2C len: 369aa%3B similar to SW:Y00R_MYCTU hypothetical protein from Mycobacterium tuberculosis (301 aa) fasta scores%3B opt: 885%2C z-score: 925.1%2C E(): 0%2C (46.9%25 identity in 290 aa overlap).;gbkey=CDS;gene=SC5F7.11;product=hypothetical protein;protein_id=NP_626443.1;transl_table=11
NC_003888.3	RefSeq	gene	2357793	2359196	.	+	.	ID=gene2191;Dbxref=GeneID:1097624;Name=SC5F7.10;gbkey=Gene;gene=SC5F7.10;gene_biotype=protein_coding;gene_synonym=SC5F7.10;locus_tag=SCO2191
NC_003888.3	RefSeq	CDS	2357793	2359196	.	+	0	ID=cds2154;Parent=gene2191;Dbxref=Genbank:NP_626444.1,GeneID:1097624;Name=NP_626444.1;Note=SC5F7.10%2C probable oxidoreductase%2C len: 467 aa%3B low similarity to many e.g. SW:PUO_MICRU putrescine oxidase from Micrococcus rubens (478 aa) fasta scores%3B opt: 195%2C z-score: 192.3%2C E(): 0.0022%2C (42.7%25 identity in 110 aa overlap).;gbkey=CDS;gene=SC5F7.10;product=oxidoreductase;protein_id=NP_626444.1;transl_table=11
NC_003888.3	RefSeq	gene	2359257	2360720	.	-	.	ID=gene2192;Dbxref=GeneID:1097625;Name=SC5F7.09c;gbkey=Gene;gene=SC5F7.09c;gene_biotype=protein_coding;gene_synonym=SC5F7.09c;locus_tag=SCO2192
NC_003888.3	RefSeq	CDS	2359257	2360720	.	-	0	ID=cds2155;Parent=gene2192;Dbxref=Genbank:NP_626445.1,GeneID:1097625;Name=NP_626445.1;Note=SC5F7.09c%2C possible regulator%2C len: 487 aa%3B similar to others from Streptomyces spp. e.g. TR:Q53958 (EMBL:M80614) sporulation associated proteins from Streptomyces coelicolor (473 aa) fasta scores%3B opt: 728%2C z-score: 812.2%2C E(): 0%2C (39.7%25 identity in 489 aa overlap) and TR:O88053 (EMBL:AL031541) transcriptional regulator from Streptomyces coelicolor (446 aa) fasta scores%3B opt: 501%2C z-score: 560.4%2C E(): 7e-24%2C (33.8%25 identity in 459 aa overlap).;gbkey=CDS;gene=SC5F7.09c;product=regulator;protein_id=NP_626445.1;transl_table=11
NC_003888.3	RefSeq	gene	2360955	2361752	.	+	.	ID=gene2193;Dbxref=GeneID:1097626;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;gene_synonym=SC5F7.08;locus_tag=SCO2193
NC_003888.3	RefSeq	CDS	2360955	2361752	.	+	0	ID=cds2156;Parent=gene2193;Dbxref=Genbank:NP_733562.1,GeneID:1097626;Name=NP_733562.1;Note=lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse%3B lipoate-protein ligase B%3B transfers lipoate to apolipoproteins%3B involved in lipoate metabolism;gbkey=CDS;gene=lipB;product=lipoyltransferase;protein_id=NP_733562.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2361171	2361218	.	+	.	ID=id2702;Dbxref=GeneID:1097626;Note=PS01313 Lipoate-protein ligase B signature.;gbkey=misc_feature;gene=lipB
NC_003888.3	RefSeq	sequence_feature	2361587	2364134	.	+	.	ID=id2703;Note=overlap with Streptomyces coelicolor cosmid SC5F7 (EMBL:AL096872);gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	2361897	2361900	.	+	.	ID=id2704;gbkey=RBS
NC_003888.3	RefSeq	gene	2361907	2362860	.	+	.	ID=gene2194;Dbxref=GeneID:1097627;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;gene_synonym=lipA,SC5F7.07;locus_tag=SCO2194
NC_003888.3	RefSeq	CDS	2361907	2362860	.	+	0	ID=cds2157;Parent=gene2194;Dbxref=Genbank:NP_626446.1,GeneID:1097627;Name=NP_626446.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;gene=lipA;product=lipoyl synthase;protein_id=NP_626446.1;transl_table=11
NC_003888.3	RefSeq	gene	2363105	2363320	.	+	.	ID=gene2195;Dbxref=GeneID:1097628;Name=SC5F7.06;gbkey=Gene;gene=SC5F7.06;gene_biotype=protein_coding;gene_synonym=SC5F7.06;locus_tag=SCO2195
NC_003888.3	RefSeq	CDS	2363105	2363320	.	+	0	ID=cds2158;Parent=gene2195;Dbxref=Genbank:NP_626447.1,GeneID:1097628;Name=NP_626447.1;Note=SC5F7.06%2C unknown%2C len: 71aa;gbkey=CDS;gene=SC5F7.06;product=hypothetical protein;protein_id=NP_626447.1;transl_table=11
NC_003888.3	RefSeq	gene	2363402	2364106	.	+	.	ID=gene2196;Dbxref=GeneID:1097629;Name=SC5F7.05;gbkey=Gene;gene=SC5F7.05;gene_biotype=protein_coding;gene_synonym=SC5F7.05;locus_tag=SCO2196
NC_003888.3	RefSeq	CDS	2363402	2364106	.	+	0	ID=cds2159;Parent=gene2196;Dbxref=Genbank:NP_626448.1,GeneID:1097629;Name=NP_626448.1;Note=SC5F7.05%2C possible integral membrane protein%2C len: 234aa%3B similar to SW:Y00U_MYCTU hypothetical protein from Mycobacterium tuberculosis (250 aa) fasta scores%3B opt: 574%2C z-score: 642.0%2C E(): 2e-28%2C (39.4%25 identity in 226 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC5F7.05;product=hypothetical protein;protein_id=NP_626448.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	2364123	2364184	.	-	.	ID=id2705;Note=7414 ACGCCGGTACGGCGAGGGGGGCGGCCCGA 7442 - 7447 TCGGGCCGCCCCCCTCGCCGTACCGGCGT 7475. Score 87: 29/29 (100%25) matches%2C 0 gapS;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2364217	2364684	.	-	.	ID=gene2197;Dbxref=GeneID:1097630;Name=SC3H12.05c;gbkey=Gene;gene=SC3H12.05c;gene_biotype=protein_coding;gene_synonym=SC3H12.05c;locus_tag=SCO2197
NC_003888.3	RefSeq	CDS	2364217	2364684	.	-	0	ID=cds2160;Parent=gene2197;Dbxref=Genbank:NP_626449.1,GeneID:1097630;Name=NP_626449.1;Note=SC3H12.05c%2C possible integral membrane protein%2C len: 155 aa%3B identical to previously sequenced TR:CAB51281 (EMBL:AL096872) Streptomyces coelicolor hypothetical 16.6 kD protein SC5F7.04c%2C 155 aa and similar to SW:YCKC_BACSU (EMBL:D50453) Bacillus subtilis hypothetical 17.0 kD protein in ComJ 5'region (ORF3) YckC%2C 151 aa%3B fasta scores: opt: 108 z-score: 138.4 E(): 2.5%3B 33.1%25 identity in 118 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3H12.05c;product=hypothetical protein;protein_id=NP_626449.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2364894	2364900	.	+	.	ID=id2706;gbkey=RBS
NC_003888.3	RefSeq	gene	2364905	2366314	.	+	.	ID=gene2198;Dbxref=GeneID:1097631;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;gene_synonym=glnA,SC3H12.06;locus_tag=SCO2198
NC_003888.3	RefSeq	CDS	2364905	2366314	.	+	0	ID=cds2161;Parent=gene2198;Dbxref=Genbank:NP_626450.1,GeneID:1097631;Name=NP_626450.1;Note=SC3H12.06%2C glnA%2C glutamine synthetase I%2C len: 469 aa%3B identical to previously sequenced SW:GLNA_STRCO (EMBL:M23172) Streptomyces coelicolor glutamine synthetase (EC 6.3.1.2) (glutamate-ammonia ligase) GlnA%2C 469 aa and to previously sequenced TR:CAB51282 (EMBL:AL096872) Streptomyces coelicolor glutamine synthetase I SC5F7.03%2C 469 aa and highly similar to SW:GLN1_STRVR (EMBL:X70924) Streptomyces viridochromogenes glutamine synthetase I (EC 6.3.1.2) (glutamate-ammonia ligase I) GlnI or GlnA%2C 469 aa%3B fasta scores: opt: 2905 z-score: 3417.5 E(): 0%3B 90.6%25 identity in 469 aa overlap. Contains Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase and three Prosite matches to entries PS00180 Glutamine synthetase signature 1%2C PS00181 Glutamine synthetase ATP-binding region signature and PS00182 Glutamine synthetase class-I adenylation site;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=NP_626450.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2364956	2366017	.	+	.	ID=id2707;Dbxref=GeneID:1097631;Note=Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase%2C score 735.40%2C E-value 1.2e-233;gbkey=misc_feature;gene=glnA
NC_003888.3	RefSeq	sequence_feature	2365049	2365105	.	+	.	ID=id2708;Dbxref=GeneID:1097631;Note=PS00180 Glutamine synthetase signature 1;gbkey=misc_feature;gene=glnA
NC_003888.3	RefSeq	sequence_feature	2365670	2365717	.	+	.	ID=id2709;Dbxref=GeneID:1097631;Note=PS00181 Glutamine synthetase ATP-binding region signature;gbkey=misc_feature;gene=glnA
NC_003888.3	RefSeq	sequence_feature	2366057	2366095	.	+	.	ID=id2710;Dbxref=GeneID:1097631;Note=PS00182 Glutamine synthetase class-I adenylation site;gbkey=misc_feature;gene=glnA
NC_003888.3	RefSeq	ribosome_entry_site	2366471	2366475	.	+	.	ID=id2711;gbkey=RBS
NC_003888.3	RefSeq	gene	2366476	2366745	.	+	.	ID=gene2199;Dbxref=GeneID:1097632;Name=SC3H12.07;gbkey=Gene;gene=SC3H12.07;gene_biotype=protein_coding;gene_synonym=SC3H12.07;locus_tag=SCO2199
NC_003888.3	RefSeq	CDS	2366476	2366745	.	+	0	ID=cds2162;Parent=gene2199;Dbxref=Genbank:NP_626451.1,GeneID:1097632;Name=NP_626451.1;Note=SC3H12.07%2C possible integral membrane protein%2C len: 89 aa%3B identical to previously sequenced TR:CAB51283 (EMBL:AL096872) Streptomyces coelicolor hypothetical protein SC5F7.02%2C 89 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3H12.07;product=hypothetical protein;protein_id=NP_626451.1;transl_table=11
NC_003888.3	RefSeq	gene	2366795	2367634	.	-	.	ID=gene2200;Dbxref=GeneID:1097633;Name=SC3H12.08c;gbkey=Gene;gene=SC3H12.08c;gene_biotype=protein_coding;gene_synonym=SC3H12.08c;locus_tag=SCO2200
NC_003888.3	RefSeq	CDS	2366795	2367634	.	-	0	ID=cds2163;Parent=gene2200;Dbxref=Genbank:NP_626452.1,GeneID:1097633;Name=NP_626452.1;Note=SC3H12.08c%2C hypothetical protein%2C len: 279 aa%3B identical to N-terminal region of previously sequenced TR:CAB58282 (EMBL:AL121850) Streptomyces coelicolor conserved hypothetical protein SCC78.01c (fragment)%2C 234 aa%2C identical to C-terminal region of TR:CAB51284 (EMBLAL096872:) Streptomyces coelicolor hypothetical 9.2 kD protein SC5F7.01c (fragment)%2C 85 aa and similar to TR:O30485 (EMBL:AF007101) Streptomyces hygroscopicus hypothetical 29.8 kD protein%2C 282 aa%3B fasta scores: opt: 559 z-score: 634.1 E(): 6.1e-28%3B 40.6%25 identity in 286 aa overlap;gbkey=CDS;gene=SC3H12.08c;product=hypothetical protein;protein_id=NP_626452.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2366933	2370807	.	+	.	ID=id2712;Note=Streptomyces coelicolor cosmid StC78 (EMBL:AL121850);gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	2367641	2367645	.	-	.	ID=id2713;gbkey=RBS
NC_003888.3	RefSeq	gene	2367728	2368099	.	+	.	ID=gene2201;Dbxref=GeneID:1097634;Name=SC3H12.09;gbkey=Gene;gene=SC3H12.09;gene_biotype=protein_coding;gene_synonym=SC3H12.09;locus_tag=SCO2201
NC_003888.3	RefSeq	CDS	2367728	2368099	.	+	0	ID=cds2164;Parent=gene2201;Dbxref=Genbank:NP_626453.1,GeneID:1097634;Name=NP_626453.1;Note=SC3H12.09%2C conserved hypothetical protein%2C len: 123 aa%3B identical to previously sequenced TR:CAB58283 (EMBL:AL121850) Streptomyces coelicolor conserved hypothetical protein SCC78.02%2C 123 aa and similar to TR:Q9ZBQ5 (EMBL:AL034447) Streptomyces coelicolor hypothetical 17.8 kD protein SC7A1.18c%2C 141 aa%3B fasta scores: opt: 317 z-score: 412.3 E(): 1.4e-15%3B 44.6%25 identity in 112 aa overlap. Contains Pfam match to entry PF01638 DUF24%2C Protein of unknown function;gbkey=CDS;gene=SC3H12.09;product=hypothetical protein;protein_id=NP_626453.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2367818	2368090	.	+	.	ID=id2714;Dbxref=GeneID:1097634;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function%2C score 83.20%2C E-value 5.2e-21;gbkey=misc_feature;gene=SC3H12.09
NC_003888.3	RefSeq	ribosome_entry_site	2368166	2368169	.	+	.	ID=id2715;gbkey=RBS
NC_003888.3	RefSeq	gene	2368178	2369092	.	+	.	ID=gene2202;Dbxref=GeneID:1097635;Name=htpX2;gbkey=Gene;gene=htpX2;gene_biotype=protein_coding;gene_synonym=htpX2,SC3H12.10;locus_tag=SCO2202
NC_003888.3	RefSeq	CDS	2368178	2369092	.	+	0	ID=cds2165;Parent=gene2202;Dbxref=Genbank:NP_626454.1,GeneID:1097635;Name=NP_626454.1;Note=metalloprotease;gbkey=CDS;gene=htpX2;product=heat shock protein HtpX;protein_id=NP_626454.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2368421	2369041	.	+	.	ID=id2716;Dbxref=GeneID:1097635;Note=Pfam match to entry PF01435 Peptidase_M48%2C Peptidase family M48%2C score 82.40%2C E-value 9e-21;gbkey=misc_feature;gene=htpX2
NC_003888.3	RefSeq	ribosome_entry_site	2369091	2369094	.	+	.	ID=id2717;gbkey=RBS
NC_003888.3	RefSeq	gene	2369102	2369680	.	+	.	ID=gene2203;Dbxref=GeneID:1097636;Name=SC3H12.11;gbkey=Gene;gene=SC3H12.11;gene_biotype=protein_coding;gene_synonym=SC3H12.11;locus_tag=SCO2203
NC_003888.3	RefSeq	CDS	2369102	2369680	.	+	0	ID=cds2166;Parent=gene2203;Dbxref=Genbank:NP_626455.1,GeneID:1097636;Name=NP_626455.1;Note=SC3H12.11%2C hypothetical protein%2C len: 192 aa%3B identical to previously sequenced TR:CAB58285 (EMBL:AL121850) Streptomyces coelicolor hypothetical 20.8 kD protein SCC78.04 and similar to SW:YMU5_STRCM (EMBL:L10064) Streptomyces cinnamonensis hypothetical 25.0 kD protein in MutA 5'region (ORF-D)%2C 237 aa%3B fasta scores: opt: 114 z-score: 145.0 E(): 1.1%3B 31.1%25 identity in 151 aa overlap;gbkey=CDS;gene=SC3H12.11;product=hypothetical protein;protein_id=NP_626455.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2369757	2369761	.	+	.	ID=id2718;gbkey=RBS
NC_003888.3	RefSeq	gene	2369767	2370954	.	+	.	ID=gene2204;Dbxref=GeneID:1097637;Name=SC3H12.12;gbkey=Gene;gene=SC3H12.12;gene_biotype=protein_coding;gene_synonym=SC3H12.12;locus_tag=SCO2204
NC_003888.3	RefSeq	CDS	2369767	2370954	.	+	0	ID=cds2167;Parent=gene2204;Dbxref=Genbank:NP_626456.1,GeneID:1097637;Name=NP_626456.1;Note=SC3H12.12%2C hypothetical protein%2C len: 395 aa%3B identical to N-terminal region of previously sequenced TR:CAB58286 (EMBL:AL121850) Streptomyces coelicolor hypothetical 37.4 kD protein (fragment) SCC78.05%2C 347 aa;gbkey=CDS;gene=SC3H12.12;product=hypothetical protein;protein_id=NP_626456.1;transl_table=11
NC_003888.3	RefSeq	gene	2371009	2371323	.	-	.	ID=gene2205;Dbxref=GeneID:1097638;Name=SC3H12.13c;gbkey=Gene;gene=SC3H12.13c;gene_biotype=protein_coding;gene_synonym=SC3H12.13c;locus_tag=SCO2205
NC_003888.3	RefSeq	CDS	2371009	2371323	.	-	0	ID=cds2168;Parent=gene2205;Dbxref=Genbank:NP_626457.1,GeneID:1097638;Name=NP_626457.1;Note=SC3H12.13c%2C unknown%2C len: 104 aa;gbkey=CDS;gene=SC3H12.13c;product=hypothetical protein;protein_id=NP_626457.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2371329	2371334	.	-	.	ID=id2719;gbkey=RBS
NC_003888.3	RefSeq	gene	2371456	2371857	.	+	.	ID=gene2206;Dbxref=GeneID:1097639;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;gene_synonym=arsC,SC10B7.01,SC3H12.14;locus_tag=SCO2206
NC_003888.3	RefSeq	CDS	2371456	2371857	.	+	0	ID=cds2169;Parent=gene2206;Dbxref=Genbank:NP_733563.1,GeneID:1097639;Name=NP_733563.1;Note=SC3H12.14%2C arsC%2C arsenate reductase (partial CDS)%2C len: >47 aa%3B identical to N-terminal region of previously sequenced TR:Q9X954 (EMBL:Y13833) Streptomyces coelicolor arsenate reductase (fragment) ArsC%2C 117 aa and to SW:YGL1_STRVR (EMBL:X52842) Streptomyces viridochromogenes hypothetical 13.4 kD protein in GlnII region (ORF1)%2C 119 aa~SC10B7.01%2C arsC%2C arsenate reductase (fragment)%2C len: >117 aa%3B identical to previously sequenced TR:Q9X954 (EMBL:Y13833) Streptomyces coelicolor aresenate reductase (fragment)%2C 117 aa%2C highly similar to SW:YGL1_STRVR (EMBL:X52842) Streptomyces viridochromogenes hypothetical 13.4 kD protein in GlnII region (ORF1)%2C 119 aa%3B fasta scores: opt: 695 z-score: 873.2 E(): 0%3B 86.3%25 identity in 117 aa overlap and similar to SW:ARSC_ECOLI (EMBL:U00039%3B) Escherichia coli arsenate reductase (arsenical pump modifier) ArsC%2C 141 aa%3B fasta scores: opt: 202 z-score: 264.7 E(): 2.3e-07%3B 32.2%25 identity in 115 aa overlap;gbkey=CDS;gene=arsC;product=hypothetical protein;protein_id=NP_733563.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2371503	2375348	.	+	.	ID=id2720;Note=previously sequenced fragment (EMBL:Y13833) Streptomyces coelicolor arsC (partial)%2C glnII genes%2C ORF2%2C ORF3 %26 ORF4;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	2371965	2371970	.	+	.	ID=id2721;gbkey=RBS
NC_003888.3	RefSeq	gene	2371976	2372671	.	+	.	ID=gene2207;Dbxref=GeneID:1097640;Name=SC10B7.02;gbkey=Gene;gene=SC10B7.02;gene_biotype=protein_coding;gene_synonym=SC10B7.02;locus_tag=SCO2207
NC_003888.3	RefSeq	CDS	2371976	2372671	.	+	0	ID=cds2170;Parent=gene2207;Dbxref=Genbank:NP_626458.1,GeneID:1097640;Name=NP_626458.1;Note=SC10B7.02%2C hypothetical hypothetical protein%2C len: 231 aa%3B identical to previously sequenced TR:Q9X955 (EMBL:Y13833) Streptomyces coelicolor hypothetical 23.4 kD protein precursor. Contains a possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10B7.02;product=hypothetical protein;protein_id=NP_626458.1;transl_table=11
NC_003888.3	RefSeq	gene	2372674	2373546	.	-	.	ID=gene2208;Dbxref=GeneID:1097641;Name=SC10B7.03c;gbkey=Gene;gene=SC10B7.03c;gene_biotype=protein_coding;gene_synonym=SC10B7.03c;locus_tag=SCO2208
NC_003888.3	RefSeq	CDS	2372674	2373546	.	-	0	ID=cds2171;Parent=gene2208;Dbxref=Genbank:NP_626459.1,GeneID:1097641;Name=NP_626459.1;Note=SC10B7.03c%2C probable carboxylesterase%2C len: 290 aa%3B identical to previously sequenced TR:Q9X956 (EMBL:Y13833) Streptomyces coelicolor hypothetical 30.8 kD protein%2C 290 aa and similar to TR:Q59248 (EMBL:X82892) Bacillus subtilis carboxylesterase NP (EC 3.1.1.1) Nap%2C 300 aa%3B fasta scores: opt: 438 z-score: 516.3 E(): 2.2e-21%3B 31.5%25 identity in 292 aa overlap;gbkey=CDS;gene=SC10B7.03c;product=carboxylesterase;protein_id=NP_626459.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2373645	2373650	.	+	.	ID=id2722;gbkey=RBS
NC_003888.3	RefSeq	gene	2373658	2374182	.	+	.	ID=gene2209;Dbxref=GeneID:1097642;Name=SC10B7.04;gbkey=Gene;gene=SC10B7.04;gene_biotype=protein_coding;gene_synonym=SC10B7.04;locus_tag=SCO2209
NC_003888.3	RefSeq	CDS	2373658	2374182	.	+	0	ID=cds2172;Parent=gene2209;Dbxref=Genbank:NP_626460.1,GeneID:1097642;Name=NP_626460.1;Note=S10B7.04 probable transcriptional regulator%2C len: 174 aa%3B identical to previously sequenced TR:Q9X957 (EMBL:Y13833) Streptomyces coelicolor hypothetical 19.0 kD protein%2C 174 aa and similar to TR:Q9XA85 (EMBL:AL096837) Streptomyces coelicolor marR-family transcriptional regulator%2C SCF43A.30c%2C 168 aa%3B fasta scores: opt: 276 z-score: 336.5 E(): 2.3e-11%3B 39.9%25 identity in 153 aa overlap;gbkey=CDS;gene=SC10B7.04;product=transcriptional regulator;protein_id=NP_626460.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2374304	2374308	.	+	.	ID=id2723;gbkey=RBS
NC_003888.3	RefSeq	gene	2374319	2375350	.	+	.	ID=gene2210;Dbxref=GeneID:1097643;Name=glnII;gbkey=Gene;gene=glnII;gene_biotype=protein_coding;gene_synonym=glnII,SC10B7.05;locus_tag=SCO2210
NC_003888.3	RefSeq	CDS	2374319	2375350	.	+	0	ID=cds2173;Parent=gene2210;Dbxref=Genbank:NP_626461.1,GeneID:1097643;Name=NP_626461.1;Note=SC10B7.05%2C glnII%2C glutamine synthetase%2C len: 343 aa%3B identical to previously sequenced TR:Q9X958 (EMBL:Y13833) Streptomyces coelicolor glutamine synthetase (EC 6.3.1.2) (glutamate-ammonia ligase) GlnII%2C 343 aa and highly similar to SW:GLN2_STRVR (EMBL:X52842) Streptomyces viridochromogenes glutamine synthetase II (EC 6.3.1.2) (glutamate-ammonia ligase II) GlnII%2C 343 aa%3B fasta scores: opt: 2196 z-score: 2572.0 E(): 0%3B 91.0%25 identity in 343 aa overlap. Contains Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase and two matches to Prosite entries PS00180 Glutamine synthetase signature 1 and PS00181 Glutamine synthetase  ATP-binding region signature;gbkey=CDS;gene=glnII;product=glutamine synthetase;protein_id=NP_626461.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2374319	2375296	.	+	.	ID=id2724;Dbxref=GeneID:1097643;Note=Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase%2C score 559.70%2C E-value 1e-177;gbkey=misc_feature;gene=glnII
NC_003888.3	RefSeq	sequence_feature	2374439	2374492	.	+	.	ID=id2725;Dbxref=GeneID:1097643;Note=PS00180 Glutamine synthetase signature 1;gbkey=misc_feature;gene=glnII
NC_003888.3	RefSeq	sequence_feature	2374973	2375023	.	+	.	ID=id2726;Dbxref=GeneID:1097643;Note=PS00181 Glutamine synthetase ATP-binding region signature;gbkey=misc_feature;gene=glnII
NC_003888.3	RefSeq	ribosome_entry_site	2375394	2375397	.	+	.	ID=id2727;gbkey=RBS
NC_003888.3	RefSeq	gene	2375406	2376335	.	+	.	ID=gene2211;Dbxref=GeneID:1097644;Name=SC10B7.06;gbkey=Gene;gene=SC10B7.06;gene_biotype=protein_coding;gene_synonym=SC10B7.06;locus_tag=SCO2211
NC_003888.3	RefSeq	CDS	2375406	2376335	.	+	0	ID=cds2174;Parent=gene2211;Dbxref=Genbank:NP_626462.1,GeneID:1097644;Name=NP_626462.1;Note=SC10B7.06%2C unknown%2C len: 309 aa;gbkey=CDS;gene=SC10B7.06;product=hypothetical protein;protein_id=NP_626462.1;transl_table=11
NC_003888.3	RefSeq	gene	2376423	2376545	.	+	.	ID=gene2212;Dbxref=GeneID:1097645;Name=SC10B7.07;gbkey=Gene;gene=SC10B7.07;gene_biotype=protein_coding;gene_synonym=SC10B7.07;locus_tag=SCO2212
NC_003888.3	RefSeq	CDS	2376423	2376545	.	+	0	ID=cds2175;Parent=gene2212;Dbxref=Genbank:NP_626463.1,GeneID:1097645;Name=NP_626463.1;Note=SC10B7.07%2C unknown%2C len: 40 aa;gbkey=CDS;gene=SC10B7.07;product=hypothetical protein;protein_id=NP_626463.1;transl_table=11
NC_003888.3	RefSeq	gene	2376676	2377257	.	+	.	ID=gene2213;Dbxref=GeneID:1097646;Name=SC10B7.08;gbkey=Gene;gene=SC10B7.08;gene_biotype=protein_coding;gene_synonym=SC10B7.08;locus_tag=SCO2213
NC_003888.3	RefSeq	CDS	2376676	2377257	.	+	0	ID=cds2176;Parent=gene2213;Dbxref=Genbank:NP_626464.1,GeneID:1097646;Name=NP_626464.1;Note=SC10B7.08%2C probable regulatory protein%2C len: 193 aa%3B C-terminal region similar to C-terminal region of SW:GLNR_STRCO (EMBL:L03213) Streptomyces coelicolor transcriptional regulatory protein GlnR%2C 267 aa%3B fasta scores: opt: 330 z-score: 356.0 E(): 1.9e-12%3B 47.1%25 identity in 121 aa overlap. Contains Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=SC10B7.08;product=regulatory protein;protein_id=NP_626464.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2377015	2377227	.	+	.	ID=id2728;Dbxref=GeneID:1097646;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 68.50%2C E-value 3.9e-19;gbkey=misc_feature;gene=SC10B7.08
NC_003888.3	RefSeq	gene	2377262	2378362	.	+	.	ID=gene2214;Dbxref=GeneID:1097647;Name=SC10B7.09;gbkey=Gene;gene=SC10B7.09;gene_biotype=protein_coding;gene_synonym=SC10B7.09;locus_tag=SCO2214
NC_003888.3	RefSeq	CDS	2377262	2378362	.	+	0	ID=cds2177;Parent=gene2214;Dbxref=Genbank:NP_626465.1,GeneID:1097647;Name=NP_626465.1;Note=SC10B7.09%2C possible reductase%2C len: 366 aa%3B similar to TR:Q9ZA37 (EMBL:AJ011500) Streptomyces violaceoruber  DTDP4-keto-6-deoxyhexose reductase%2C 304 aa%3B fasta scores: opt: 212 z-score: 236.4 E(): 8.7e-06%3B 31.6%25 identity in 285 aa overlap;gbkey=CDS;gene=SC10B7.09;product=reductase;protein_id=NP_626465.1;transl_table=11
NC_003888.3	RefSeq	gene	2378415	2379692	.	+	.	ID=gene2215;Dbxref=GeneID:1097648;Name=SC10B7.10;gbkey=Gene;gene=SC10B7.10;gene_biotype=protein_coding;gene_synonym=SC10B7.10;locus_tag=SCO2215
NC_003888.3	RefSeq	CDS	2378415	2379692	.	+	0	ID=cds2178;Parent=gene2215;Dbxref=Genbank:NP_626466.1,GeneID:1097648;Name=NP_626466.1;Note=SC10B7.10%2C possible two-component system sensor kinase%2C len: 425 aa%3B similar to various sensor kinases%2C e.g. TR:Q9ZBS5 (EMBL:AL034446) Streptomyces coelicolor SC1A9.27c%2C 303 aa%3B fasta scores: opt: 304 z-score: 337.8 E(): 2e-11%3B 29.1%25 identity in 306 aa overlap and low similarity to C-terminal region of SW:NARX_ECOLI (EMBL:X13360) Escherichia coli mitrate/nitrite sensor protein (EC 2.7.3.-) NarX%2C 598 aa%3B fasta scores: opt: 214 z-score: 235.8 E(): 9.4e-06%3B 27.8%25 identity in 194 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10B7.10;product=two-component system sensor kinase;protein_id=NP_626466.1;transl_table=11
NC_003888.3	RefSeq	gene	2379677	2380330	.	+	.	ID=gene2216;Dbxref=GeneID:1097649;Name=SC10B7.11;gbkey=Gene;gene=SC10B7.11;gene_biotype=protein_coding;gene_synonym=SC10B7.11;locus_tag=SCO2216
NC_003888.3	RefSeq	CDS	2379677	2380330	.	+	0	ID=cds2179;Parent=gene2216;Dbxref=Genbank:NP_626467.1,GeneID:1097649;Name=NP_626467.1;Note=SC10B7.11%2C probable two-component system response regulator%2C len: 217 aa%3B similar to TR:Q9X8Q7 (EMBL:AL049754) Streptomyces coelicolor two-component system regulator SCH10.18c%2C 228 aa%3B fasta scores: opt: 349 z-score: 426.3 E(): 2.3e-16%3B 34.8%25 identity in 221 aa overlap and to Streptomyces coelicolor SCC75.27c%2C 228 aa%3B fasta scores: opt: 722 z-score: 711.8 E(): 2.9e-34%3B 54.4%25 identity in 217 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family;gbkey=CDS;gene=SC10B7.11;product=two-component system response regulator;protein_id=NP_626467.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2380121	2380324	.	+	.	ID=id2729;Dbxref=GeneID:1097649;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 35.60%2C E-value 1.2e-06;gbkey=misc_feature;gene=SC10B7.11
NC_003888.3	RefSeq	ribosome_entry_site	2380481	2380485	.	+	.	ID=id2730;gbkey=RBS
NC_003888.3	RefSeq	gene	2380490	2381995	.	+	.	ID=gene2217;Dbxref=GeneID:1097650;Name=SC10B7.12;gbkey=Gene;gene=SC10B7.12;gene_biotype=protein_coding;gene_synonym=SC10B7.12;locus_tag=SCO2217
NC_003888.3	RefSeq	CDS	2380490	2381995	.	+	0	ID=cds2180;Parent=gene2217;Dbxref=Genbank:NP_626468.1,GeneID:1097650;Name=NP_626468.1;Note=SC10B7.12%2C probable hypothetical protein%2C len: 501 aa%3B similar to TR:CAB61161 (EMBL:AL132973) Streptomyces coelicolor  membrane protein%2C SCF91.04c%2C 718 aa%3B fasta scores: opt: 1496 z-score: 1486.8 E(): 0%3B 55.1%25 identity in 523 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10B7.12;product=hypothetical protein;protein_id=NP_626468.1;transl_table=11
NC_003888.3	RefSeq	gene	2382072	2382518	.	-	.	ID=gene2218;Dbxref=GeneID:1097651;Name=SC10B7.13c;gbkey=Gene;gene=SC10B7.13c;gene_biotype=protein_coding;gene_synonym=SC10B7.13c;locus_tag=SCO2218
NC_003888.3	RefSeq	CDS	2382072	2382518	.	-	0	ID=cds2181;Parent=gene2218;Dbxref=Genbank:NP_626469.1,GeneID:1097651;Name=NP_626469.1;Note=SC10B7.13c%2C possible lipoprotein%2C len: 148 aa%3B similar to TR:O07722 (EMBL:Z97193) Mycobacterium tuberculosis hypothetical 19.8 kD protein MTCY180.07%2C 201 aa%3B fasta scores: opt: 121 z-score: 149.5 E(): 0.6%3B 33.1%25 identity in 160 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10B7.13c;product=lipoprotein;protein_id=NP_626469.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2382453	2382485	.	-	.	ID=id2731;Dbxref=GeneID:1097651;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC10B7.13c
NC_003888.3	RefSeq	ribosome_entry_site	2382524	2382528	.	-	.	ID=id2732;gbkey=RBS
NC_003888.3	RefSeq	gene	2382545	2383162	.	+	.	ID=gene2219;Dbxref=GeneID:1097652;Name=SC10B7.14;gbkey=Gene;gene=SC10B7.14;gene_biotype=protein_coding;gene_synonym=SC10B7.14;locus_tag=SCO2219
NC_003888.3	RefSeq	CDS	2382545	2383162	.	+	0	ID=cds2182;Parent=gene2219;Dbxref=Genbank:NP_626470.1,GeneID:1097652;Name=NP_626470.1;Note=SC10B7.14%2C hypothetical protein%2C len: 205 aa%3B C-terminal region similar to TR:Q9RUW3 (EMBL:AE001974) Deinococcus radiodurans hypothetical protein DR1267%2C 163 aa%3B fasta scores: opt: 471 Z-score: 554.2 E(): 3.1e-23%3B 52.761%25 identity in 163 aa overlap;gbkey=CDS;gene=SC10B7.14;product=hypothetical protein;protein_id=NP_626470.1;transl_table=11
NC_003888.3	RefSeq	gene	2383230	2385161	.	+	.	ID=gene2220;Dbxref=GeneID:1097653;Name=SC10B7.15;gbkey=Gene;gene=SC10B7.15;gene_biotype=protein_coding;gene_synonym=SC10B7.15;locus_tag=SCO2220
NC_003888.3	RefSeq	CDS	2383230	2385161	.	+	0	ID=cds2183;Parent=gene2220;Dbxref=Genbank:NP_626471.1,GeneID:1097653;Name=NP_626471.1;Note=SC10B7.15%2C unknown%2C len: 643 aa;gbkey=CDS;gene=SC10B7.15;product=hypothetical protein;protein_id=NP_626471.1;transl_table=11
NC_003888.3	RefSeq	gene	2385265	2386155	.	+	.	ID=gene2221;Dbxref=GeneID:1097654;Name=SC10B7.16;gbkey=Gene;gene=SC10B7.16;gene_biotype=protein_coding;gene_synonym=SC10B7.16;locus_tag=SCO2221
NC_003888.3	RefSeq	CDS	2385265	2386155	.	+	0	ID=cds2184;Parent=gene2221;Dbxref=Genbank:NP_626472.1,GeneID:1097654;Name=NP_626472.1;Note=SC10B7.16%2C hypothetical protein%2C len: 296 aa%3B similar to TR:O33319 (EMBL:AL008967) Mycobacterium tuberculosis hypothetical 40.2 kD protein MTV002.42c%2C 356 aa%3B fasta scores: opt: 980 z-score: 1190.8 E(): 0%3B 51.2%25 identity in 281 aa overlap;gbkey=CDS;gene=SC10B7.16;product=hypothetical protein;protein_id=NP_626472.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2386140	2386145	.	+	.	ID=id2733;Dbxref=GeneID:1097654;gbkey=RBS;gene=SC10B7.16
NC_003888.3	RefSeq	gene	2386152	2387246	.	+	.	ID=gene2222;Dbxref=GeneID:1097655;Name=SC10B7.17;gbkey=Gene;gene=SC10B7.17;gene_biotype=protein_coding;gene_synonym=SC10B7.17;locus_tag=SCO2222
NC_003888.3	RefSeq	CDS	2386152	2387246	.	+	0	ID=cds2185;Parent=gene2222;Dbxref=Genbank:NP_626473.1,GeneID:1097655;Name=NP_626473.1;Note=SC10B7.17%2C probable iron-sulfur oxidoreductase ( hypothetical protein)%2C len: 364 aa%3B similar to TR:O88034 (EMBL:AL031107) Streptomyces coelicolor iron-sulfur oxidoreductase beta subunit SC5A7.28c%2C 313 aa%3B fasta scores: opt: 1032 z-score: 1177.8 E(): 0%3B 55.2%25 identity in 310 aa overlap and to SW:POBB_PSEPS (EMBL:X78823) Pseudomonas pseudoalcaligenes phenoxybenzoate dioxygenase beta subunit (EC 1.-.-.-.) PobB%2C 319 aa%3B fasta scores: opt: 680 z-score: 777.9 E(): 0%3B 40.8%25 identity in 314 aa overlap. Contains two matches to Pfam entries Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding and Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains domain match to Prosite entry PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10B7.17;product=iron-sulfur oxidoreductase;protein_id=NP_626473.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2386629	2386925	.	+	.	ID=id2734;Dbxref=GeneID:1097655;Note=Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain%2C score 26.90%2C E-value 2.2e-05;gbkey=misc_feature;gene=SC10B7.17
NC_003888.3	RefSeq	sequence_feature	2386998	2387222	.	+	.	ID=id2735;Dbxref=GeneID:1097655;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 44.60%2C E-value 2.2e-09;gbkey=misc_feature;gene=SC10B7.17
NC_003888.3	RefSeq	sequence_feature	2387094	2387120	.	+	.	ID=id2736;Dbxref=GeneID:1097655;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SC10B7.17
NC_003888.3	RefSeq	gene	2387313	2388005	.	+	.	ID=gene2223;Dbxref=GeneID:1097656;Name=SC10B7.18;gbkey=Gene;gene=SC10B7.18;gene_biotype=protein_coding;gene_synonym=SC10B7.18;locus_tag=SCO2223
NC_003888.3	RefSeq	CDS	2387313	2388005	.	+	0	ID=cds2186;Parent=gene2223;Dbxref=Genbank:NP_626474.1,GeneID:1097656;Name=NP_626474.1;Note=SC10B7%2C18%2C possible tetR-family transcriptional regulator%2C len: 230 aa%3B similar to TR:Q9XAE5 (EMBL:AL079356) Streptomyces coelicolor hypothetical 24.2 kD protein SC6G9.37%2C 217 aa%3B fasta scores: opt: 688 z-score: 811.4 E(): 0%3B 52.4%25 identity in 210 aa overlap and to TR:Q9WZT0 (EMBL:AE001749) Thermotoga maritima transcriptional regulator%2C tetR family%2C TM0823%2C 190 aa%3B fasta scores: opt: 169 z-score: 208.1 E(): 0.00033%3B 32.6%25 identity in 89 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif at residues 34..55 (+4.48 SD);gbkey=CDS;gene=SC10B7.18;product=TetR family transcriptional regulator;protein_id=NP_626474.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2387364	2387504	.	+	.	ID=id2737;Dbxref=GeneID:1097656;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 32.80%2C E-value 2.3e-07;gbkey=misc_feature;gene=SC10B7.18
NC_003888.3	RefSeq	gene	2388002	2388466	.	+	.	ID=gene2224;Dbxref=GeneID:1097657;Name=SC10B7.19;gbkey=Gene;gene=SC10B7.19;gene_biotype=protein_coding;gene_synonym=SC10B7.19;locus_tag=SCO2224
NC_003888.3	RefSeq	CDS	2388002	2388466	.	+	0	ID=cds2187;Parent=gene2224;Dbxref=Genbank:NP_626475.1,GeneID:1097657;Name=NP_626475.1;Note=SC10B7.19%2C unknown%2C len: 154 aa. High content in alanine and proline amino acid residues. Also high G+C content (80.3%25);gbkey=CDS;gene=SC10B7.19;product=hypothetical protein;protein_id=NP_626475.1;transl_table=11
NC_003888.3	RefSeq	gene	2388485	2388844	.	-	.	ID=gene2225;Dbxref=GeneID:1097658;Name=SC10B7.20c;gbkey=Gene;gene=SC10B7.20c;gene_biotype=protein_coding;gene_synonym=SC10B7.20c;locus_tag=SCO2225
NC_003888.3	RefSeq	CDS	2388485	2388844	.	-	0	ID=cds2188;Parent=gene2225;Dbxref=Genbank:NP_626476.1,GeneID:1097658;Name=NP_626476.1;Note=SC10B7.20c%2C possible isomerase%2C len: 119 aa%3B low similarities to SW:HPCD_ECOLI (EMBL:X53666) Escherichia coli 5-carboxymethyl-2-hydroxymuconate delta-isomerase HpcD%2C 125 aa%3B fasta scores: opt: 104 z-score: 146.1 E(): 0.93%3B 21.4%25 identity in 112 aa overlap;gbkey=CDS;gene=SC10B7.20c;product=isomerase;protein_id=NP_626476.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2388849	2388853	.	-	.	ID=id2738;gbkey=RBS
NC_003888.3	RefSeq	gene	2388900	2394296	.	-	.	ID=gene2226;Dbxref=GeneID:1097659;Name=SC10B7.21c;gbkey=Gene;gene=SC10B7.21c;gene_biotype=protein_coding;gene_synonym=SC10B7.21c;locus_tag=SCO2226
NC_003888.3	RefSeq	CDS	2388900	2394296	.	-	0	ID=cds2189;Parent=gene2226;Dbxref=Genbank:NP_626477.1,GeneID:1097659;Name=NP_626477.1;Note=SC10B7.21c%2C probable bi-functional protein ( alpha-amylase/dextrinase)%2C len: 1798 aa%3B N-terminal identical to SW:AMY_STRLI (EMBL:X70255) Streptomyces lividans alpha-amylase precursor (EC 3.2.1.1) Amy%2C 919 aa and C-terminal similar to TR:O48541 (EMBL:AF022725) Hordeum vulgare (Barley) limit dextrinase HVLD99%2C 904 aa%3B fasta scores: opt: 2114 z-score: 2193.6 E(): 0%3B 42.4%25 identity in 887 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10B7.21c;product=bifunctional alpha-amylase/dextrinase;protein_id=NP_626477.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2392545	2394125	.	-	.	ID=id2739;Dbxref=GeneID:1097659;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 478.90%2C E-value 4e-140;gbkey=misc_feature;gene=SC10B7.21c
NC_003888.3	RefSeq	gene	2394422	2394982	.	-	.	ID=gene2227;Dbxref=GeneID:1097660;Name=SC10B7.22c;gbkey=Gene;gene=SC10B7.22c;gene_biotype=protein_coding;gene_synonym=SC10B7.22c;locus_tag=SCO2227
NC_003888.3	RefSeq	CDS	2394422	2394982	.	-	0	ID=cds2190;Parent=gene2227;Dbxref=Genbank:NP_626478.1,GeneID:1097660;Name=NP_626478.1;Note=SC10B7.22c possible acetyltransferase%2C len: 186 aa%3B similar to TR:Q9XAQ0 (EMBL:AL078618) Streptomyces coelicolor  acetyltransferase SC10A7.25%2C 187 aa%3B fasta scores: opt: 160 z-score: 203.0 E(): 0.00063%3B 29.9%25 identity in 157 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC10B7.22c;product=acetyltransferase;protein_id=NP_626478.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2394503	2394925	.	-	.	ID=id2740;Dbxref=GeneID:1097660;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 30.60%2C E-value 3.7e-05;gbkey=misc_feature;gene=SC10B7.22c
NC_003888.3	RefSeq	gene	2395074	2396807	.	-	.	ID=gene2228;Dbxref=GeneID:1097661;Name=aglA;gbkey=Gene;gene=aglA;gene_biotype=protein_coding;gene_synonym=aglA,SC10B7.23c;locus_tag=SCO2228
NC_003888.3	RefSeq	CDS	2395074	2396807	.	-	0	ID=cds2191;Parent=gene2228;Dbxref=Genbank:NP_626479.1,GeneID:1097661;Name=NP_626479.1;Note=SC10B7.23c%2C aglA%2C alpha-glucosidase%2C len: 577 aa%3B highly similar to TR:P72463 (EMBL:Y08304) Streptomyces limosus alpha-glucosidase AglA%2C 391 aa%3B fasta scores: opt: 1453 z-score: 1607.1 E(): 0%3B 72.0%25 identity in 347 aa overlap%2C to TR:AAD50603 (EMBL:AF096282) Thermus aquaticus alpha-glucosidase%2C 529 aa%3B fasta scores: opt: 925 z-score: 1022.3 E(): 0%3B 40.2%25 identity in 567 aa overlap and to SW:MAL2_DROVI (EMBL:AF006573) Drosophila virilis maltase 2 precursor (EC 3.2.1.20) Mal2%2C 524 aa%3B fasta scores: opt: 870 z-score: 961.6 E(): 0%3B 36.2%25 identity in 516 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase;gbkey=CDS;gene=aglA;product=alpha-glucosidase;protein_id=NP_626479.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2395143	2396723	.	-	.	ID=id2741;Dbxref=GeneID:1097661;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 283.80%2C E-value 2.1e-81;gbkey=misc_feature;gene=aglA
NC_003888.3	RefSeq	gene	2396944	2397855	.	-	.	ID=gene2229;Dbxref=GeneID:1097662;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;gene_synonym=malG,SC10B7.24c;locus_tag=SCO2229
NC_003888.3	RefSeq	CDS	2396944	2397855	.	-	0	ID=cds2192;Parent=gene2229;Dbxref=Genbank:NP_626480.1,GeneID:1097662;Name=NP_626480.1;Note=SC10B7.24c%2C malG%2C maltose permease%2C len: 303 aa%3B identical to previously sequenced TR:P72399 (EMBL:Y07706) Streptomyces coelicolor maltose permease MalG%2C 302 aa and similar to SW:MALG_ECOLI (EMBL:X02871) Escherichia coli maltose transport system permease MalG%2C 296 aa%3B fasta scores: opt: 476 z-score: 570.0 E(): 2.3e-24%3B 34.1%25 identity in 293 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=malG;product=maltose permease;protein_id=NP_626480.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2396947	2401683	.	-	.	ID=id2742;Note=previously sequenced framgment (EMBL:Y07706) 98%25 identity;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	2397073	2397297	.	-	.	ID=id2743;Dbxref=GeneID:1097662;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 61.50%2C E-value 1.8e-14;gbkey=misc_feature;gene=malG
NC_003888.3	RefSeq	sequence_feature	2397208	2397294	.	-	.	ID=id2744;Dbxref=GeneID:1097662;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=malG
NC_003888.3	RefSeq	ribosome_entry_site	2397861	2397865	.	-	.	ID=id2745;gbkey=RBS
NC_003888.3	RefSeq	gene	2397869	2398873	.	-	.	ID=gene2230;Dbxref=GeneID:1097663;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;gene_synonym=malF,SC10B7.25c;locus_tag=SCO2230
NC_003888.3	RefSeq	CDS	2397869	2398873	.	-	0	ID=cds2193;Parent=gene2230;Dbxref=Genbank:NP_626481.1,GeneID:1097663;Name=NP_626481.1;Note=SC10B7.25c%2C malF%2C maltose permease%2C len: 334 aa%3B identical to previously sequenced TR:P72398 (EMBL:Y07706) Streptomyces coelicolor maltose permease MalF%2C 334 aa and similar to SW:MALF_ECOLI (EMBL:J01648) Escherichia coli maltose transport system permease MalF%2C 514 aa%3B fasta scores: opt: 424 z-score: 504.4 E(): 1e-20%3B 33.9%25 identity in 239 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophonic membrane spanning regions;gbkey=CDS;gene=malF;product=maltose permease;protein_id=NP_626481.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2397995	2398225	.	-	.	ID=id2746;Dbxref=GeneID:1097663;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 65.90%2C E-value 8.6e-16;gbkey=misc_feature;gene=malF
NC_003888.3	RefSeq	sequence_feature	2398136	2398222	.	-	.	ID=id2747;Dbxref=GeneID:1097663;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=malF
NC_003888.3	RefSeq	ribosome_entry_site	2398883	2398887	.	-	.	ID=id2748;gbkey=RBS
NC_003888.3	RefSeq	gene	2398988	2400259	.	-	.	ID=gene2231;Dbxref=GeneID:1097664;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;gene_synonym=malE,SC10B7.26c;locus_tag=SCO2231
NC_003888.3	RefSeq	CDS	2398988	2400259	.	-	0	ID=cds2194;Parent=gene2231;Dbxref=Genbank:NP_626482.1,GeneID:1097664;Name=NP_626482.1;Note=SC10B7.26c%2C malE%2C maltose-binding protein%2C len: 423 aa%3B identical to previously sequenced TR:P72397 (EMBL:Y07706) Streptomyces coelicolor maltose-binding protein MalE%2C 423 aa and similar to SW:MALX_STRPN (EMBL:L08611) Streptococcus pneumoniae maltose/maltodextrin-binding protein precursor MalX%2C 423 aa%3B fasta scores: opt: 431 z-score: 470.1 E(): 8.4e-19%3B 28.1%25 identity in 434 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and two matches to Prosite entries PS00013 Prokaryotic membrane lipoprotein lipid attachment site (correctly situated) and PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature. Contains also possible N-terminal region peptide signal sequence;gbkey=CDS;gene=malE;product=maltose-binding protein;protein_id=NP_626482.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2399012	2399851	.	-	.	ID=id2749;Dbxref=GeneID:1097664;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 260.60%2C E-value 2.1e-74;gbkey=misc_feature;gene=malE
NC_003888.3	RefSeq	sequence_feature	2399777	2399830	.	-	.	ID=id2750;Dbxref=GeneID:1097664;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature;gbkey=misc_feature;gene=malE
NC_003888.3	RefSeq	sequence_feature	2400197	2400229	.	-	.	ID=id2751;Dbxref=GeneID:1097664;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=malE
NC_003888.3	RefSeq	ribosome_entry_site	2400264	2400268	.	-	.	ID=id2752;gbkey=RBS
NC_003888.3	RefSeq	gene	2400651	2401685	.	+	.	ID=gene2232;Dbxref=GeneID:1097665;Name=malR;gbkey=Gene;gene=malR;gene_biotype=protein_coding;gene_synonym=malR,SC10B7.27;locus_tag=SCO2232
NC_003888.3	RefSeq	CDS	2400651	2401685	.	+	0	ID=cds2195;Parent=gene2232;Dbxref=Genbank:NP_626483.1,GeneID:1097665;Name=NP_626483.1;Note=SC10B7.27%2C malR%2C maltose operon transcriptional repressor%2C len: 344 aa%3B identical to previously sequenced SW:MALR_STRCO (EMBL:Y07706) Streptomyces coelicolor maltose operon transcriptional repressor MalR%2C 344 aa and highly similar to SW:REGL_STRLI (EMBL:X98242) Streptomyces lividans transcriptional regulatory protein RegL%2C 345 aa%3B fasta scores: opt: 2098 z-score: 2315.7 E(): 0%3B 95.4%25 identity in 345 aa overlap. Contains Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins%2C lacI family signature. Contains a possible helix-turn-helix motif at residues 3..24 (+6.54 SD);gbkey=CDS;gene=malR;product=maltose operon transcriptional repressor;protein_id=NP_626483.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2400651	2400734	.	+	.	ID=id2753;Dbxref=GeneID:1097665;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 33.70%2C E-value 5.2e-08;gbkey=misc_feature;gene=malR
NC_003888.3	RefSeq	sequence_feature	2400663	2400719	.	+	.	ID=id2754;Dbxref=GeneID:1097665;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=malR
NC_003888.3	RefSeq	sequence_feature	2400816	2401562	.	+	.	ID=id2755;Dbxref=GeneID:1097665;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 80.00%2C E-value 4.8e-20;gbkey=misc_feature;gene=malR
NC_003888.3	RefSeq	gene	2401780	2402643	.	+	.	ID=gene2233;Dbxref=GeneID:1097666;Name=SC10B7.28;gbkey=Gene;gene=SC10B7.28;gene_biotype=protein_coding;gene_synonym=SC10B7.28;locus_tag=SCO2233
NC_003888.3	RefSeq	CDS	2401780	2402643	.	+	0	ID=cds2196;Parent=gene2233;Dbxref=Genbank:NP_626484.1,GeneID:1097666;Name=NP_626484.1;Note=SC10B7.28%2C probable integral membrane protein%2C len: 287 aa%3B similar to TR:Q9XAN7 (EMBL:AL079355) Streptomyces coelicolor  membrane protein SC4C6.03c%2C 271 aa%3B fasta scores: opt: 489 z-score: 586.3 E(): 2.8e-25%3B 38.0%25 identity in 255 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10B7.28;product=hypothetical protein;protein_id=NP_626484.1;transl_table=11
NC_003888.3	RefSeq	gene	2402769	2405768	.	-	.	ID=gene2234;Dbxref=GeneID:1097667;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;gene_synonym=glnE,SC10B7.29c,SCBAC17D6.01c;locus_tag=SCO2234
NC_003888.3	RefSeq	CDS	2402769	2405768	.	-	0	ID=cds2197;Parent=gene2234;Dbxref=Genbank:NP_733564.1,GeneID:1097667;Name=NP_733564.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;gene=glnE;product=bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase;protein_id=NP_733564.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2402771	2405019	.	-	.	ID=id2756;Dbxref=GeneID:1097667;Note=previously sequenced fragment (EMBL:Y17736);gbkey=misc_feature;gene=glnE
NC_003888.3	RefSeq	sequence_feature	2404914	2408602	.	+	.	ID=id2757;Note=previously sequenced DNA fragment. EMBL:Y17736 Streptomyces coelicolor partial nadE%2C glnE genes and orfu2E and orfu1E;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	2405774	2405780	.	-	.	ID=id2758;gbkey=RBS
NC_003888.3	RefSeq	gene	2405942	2406205	.	+	.	ID=gene2235;Dbxref=GeneID:1097668;Name=SCBAC17D6.02;gbkey=Gene;gene=SCBAC17D6.02;gene_biotype=protein_coding;gene_synonym=SCBAC17D6.02;locus_tag=SCO2235
NC_003888.3	RefSeq	CDS	2405942	2406205	.	+	0	ID=cds2198;Parent=gene2235;Dbxref=Genbank:NP_626485.1,GeneID:1097668;Name=NP_626485.1;Note=SCBAC17D6.02%2C conserved hypothetical protein%2C len: 87 aa%3B identical to previously sequenced SW:YU1E_STRCO (EMBL:Y17736) Streptomyces coelicolor hypothetical 9.7 kDa protein (ORFU1E)%2C 87 aa and similar to SW:YEFM_ECOLI (EMBL:AE000293) Escherichia coli hypothetical 9.3 kDa protein in sbcB-hisL intergenic region%2C 83 aa%3B fasta scores: opt: 250 Z-score: 348.4 bits: 68.9 E(): 8e-12%3B 51.852%25 identity in 81 aa overlap. Contains Pfam match to entry PF02604 DUF172%2C Uncharacterized ACR%2C COG2161;gbkey=CDS;gene=SCBAC17D6.02;product=hypothetical protein;protein_id=NP_626485.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2405942	2406184	.	+	.	ID=id2759;Dbxref=GeneID:1097668;Note=Pfam match to entry PF02604 DUF172%2C Uncharacterized ACR%2C COG2161%2C score 119.90%2C E-value 4.9e-32;gbkey=misc_feature;gene=SCBAC17D6.02
NC_003888.3	RefSeq	ribosome_entry_site	2406193	2406196	.	+	.	ID=id2760;Dbxref=GeneID:1097668;gbkey=RBS;gene=SCBAC17D6.02
NC_003888.3	RefSeq	gene	2406202	2406456	.	+	.	ID=gene2236;Dbxref=GeneID:1097669;Name=SCBAC17D6.03;gbkey=Gene;gene=SCBAC17D6.03;gene_biotype=protein_coding;gene_synonym=SCBAC17D6.03;locus_tag=SCO2236
NC_003888.3	RefSeq	CDS	2406202	2406456	.	+	0	ID=cds2199;Parent=gene2236;Dbxref=Genbank:NP_626486.1,GeneID:1097669;Name=NP_626486.1;Note=SCBAC17D6.03%2C conserved hypothetical protein%2C len: 84 aa%3B identical to previously sequenced TR:Q9Z4V8 (EMBL:Y17736) Streptomyces coelicolor hypothetical 10.0 kDa protein%2C 84 aa and similar to SW:YOEB_ECOLI (EMBL:AE000293) Escherichia coli hypothetical 10.2 kDa protein in sbcB-hisL intergenic region%2C 84 aa%3B fasta scores: opt: 354 Z-score: 476.5 bits: 92.5 E(): 5.9e-19%3B 53.571%25 identity in 84 aa overlap;gbkey=CDS;gene=SCBAC17D6.03;product=hypothetical protein;protein_id=NP_626486.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2406506	2406511	.	+	.	ID=id2761;gbkey=RBS
NC_003888.3	RefSeq	gene	2406519	2406965	.	+	.	ID=gene2237;Dbxref=GeneID:1097670;Name=SCBAC17D6.04;gbkey=Gene;gene=SCBAC17D6.04;gene_biotype=protein_coding;gene_synonym=SCBAC17D6.04;locus_tag=SCO2237
NC_003888.3	RefSeq	CDS	2406519	2406965	.	+	0	ID=cds2200;Parent=gene2237;Dbxref=Genbank:NP_626487.1,GeneID:1097670;Name=NP_626487.1;Note=SCBAC17D6.04%2C possible lyase%2C len: 148 aa%3B similar to TR:Q9FBS1 (EMBL:AL391072) Streptomyces coelicolor lyase SC9A4.33c%2C 143 aa%3B fasta scores: opt: 287 Z-score: 354.0 bits: 71.5 E(): 3.9e-12%3B 41.497%25 identity in 147 aa overlap. Contains 2x Pfam matches to entry PF00903 Glyoxalase%2C Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;gbkey=CDS;gene=SCBAC17D6.04;product=lyase;protein_id=NP_626487.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2406549	2406608	.	+	.	ID=id2762;Dbxref=GeneID:1097670;Note=Pfam match to entry PF00903 Glyoxalase%2C Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily%2C score 18.40%2C E-value 0.00049;gbkey=misc_feature;gene=SCBAC17D6.04
NC_003888.3	RefSeq	sequence_feature	2406762	2406923	.	+	.	ID=id2763;Dbxref=GeneID:1097670;Note=Pfam match to entry PF00903 Glyoxalase%2C Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily%2C score 24.40%2C E-value 9.3e-06;gbkey=misc_feature;gene=SCBAC17D6.04
NC_003888.3	RefSeq	gene	2406988	2408829	.	-	.	ID=gene2238;Dbxref=GeneID:1097671;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;gene_synonym=nadE,SCBAC17D6.05c;locus_tag=SCO2238
NC_003888.3	RefSeq	CDS	2406988	2408829	.	-	0	ID=cds2201;Parent=gene2238;Dbxref=Genbank:NP_626488.1,GeneID:1097671;Name=NP_626488.1;Note=SCBAC17D6.05c%2C nadE%2C NAD(+) synthase (glutamine-hydrolysing)%2C len: 613 aa%3B identical to TR:Q9Z4V9 (EMBL:Y17736) Streptomyces coelicolor NAD(+) synthase (glutamine-hydrolysing) (EC 6.3.5.1) (fragment) NadE%2C 538 aa and highly similar to SW:NADE_RHOCA (EMBL:X59399) Rhodobacter capsulatus glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hydrolysing]) NadE or AdgA%2C 552 aa%3B fasta scores: opt: 631 Z-score: 697.6 bits: 139.0 E(): 2.8e-31%3B 43.645%25 identity in 598 aa overlap. Contains Pfam matches to entries PF00795 CN_hydrolase%2C Carbon-nitrogen hydrolase and PF02540 NAD_synthase%2C NAD synthase and matches to Prosite entries PS00920 Nitrilases / cyanide hydratase signature 1 and PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=CDS;gene=nadE;product=NAD(+) synthase (glutamine-hydrolysing);protein_id=NP_626488.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2407057	2407668	.	-	.	ID=id2764;Dbxref=GeneID:1097671;Note=Pfam match to entry PF02540 NAD_synthase%2C NAD synthase%2C score 228.50%2C E-value 9.6e-65;gbkey=misc_feature;gene=nadE
NC_003888.3	RefSeq	sequence_feature	2407918	2408751	.	-	.	ID=id2765;Dbxref=GeneID:1097671;Note=Pfam match to entry PF00795 CN_hydrolase%2C Carbon-nitrogen hydrolase%2C score -18.70%2C E-value 5.9e-08;gbkey=misc_feature;gene=nadE
NC_003888.3	RefSeq	sequence_feature	2407924	2407956	.	-	.	ID=id2766;Dbxref=GeneID:1097671;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=nadE
NC_003888.3	RefSeq	sequence_feature	2408605	2408652	.	-	.	ID=id2767;Dbxref=GeneID:1097671;Note=PS00920 Nitrilases / cyanide hydratase signature 1;gbkey=misc_feature;gene=nadE
NC_003888.3	RefSeq	gene	2408840	2409466	.	-	.	ID=gene2239;Dbxref=GeneID:1097672;Name=SC1G2.01c;gbkey=Gene;gene=SC1G2.01c;gene_biotype=protein_coding;gene_synonym=SC1G2.01c,SCBAC17D6.06c;locus_tag=SCO2239
NC_003888.3	RefSeq	CDS	2408840	2409466	.	-	0	ID=cds2202;Parent=gene2239;Dbxref=Genbank:NP_733565.1,GeneID:1097672;Name=NP_733565.1;Note=SC1G2.01c%2C possible hypothetical protein%2C partial CDS%2C len: >92 aa. Weakly similar to a protein of unknown function from Synechocystis sp. (strain PCC 6803) TR:Q55943(EMBL:D64005) (196 aa)%2C fasta scores opt: 109 z-score: 144.6 E():1.1 28.9%25 identity in 83 aa overlap. Contains a a possible N-terminal signal sequence.~SCBAC17D6.06c%2C conserved hypothetical protein (fragment)%2C len: >149 aa%3B similar to TR:Q9RVD0 (EMBL:AE001960) Deinococcus radiodurans conserved hypothetical protein DR1099%2C 197 aa%3B fasta scores:opt: 179 Z-score: 226.9 bits: 48.4 E(): 4.7e-05%3B 35.821%25 identity in 134 aa overlap;gbkey=CDS;gene=SC1G2.01c;product=hypothetical protein;protein_id=NP_733565.1;transl_table=11
NC_003888.3	RefSeq	gene	2409463	2410131	.	-	.	ID=gene2240;Dbxref=GeneID:1097673;Name=SC1G2.02c;gbkey=Gene;gene=SC1G2.02c;gene_biotype=protein_coding;gene_synonym=SC1G2.02c;locus_tag=SCO2240
NC_003888.3	RefSeq	CDS	2409463	2410131	.	-	0	ID=cds2203;Parent=gene2240;Dbxref=Genbank:NP_626489.1,GeneID:1097673;Name=NP_626489.1;Note=SC1G2.02c%2C possible membrane protein%2C len: 222 aa. Contains a possible N-terminal membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC1G2.02c;product=hypothetical protein;protein_id=NP_626489.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2410404	2410408	.	+	.	ID=id2768;gbkey=RBS
NC_003888.3	RefSeq	gene	2410423	2411784	.	+	.	ID=gene2241;Dbxref=GeneID:1097674;Name=SC1G2.03;gbkey=Gene;gene=SC1G2.03;gene_biotype=protein_coding;gene_synonym=SC1G2.03;locus_tag=SCO2241
NC_003888.3	RefSeq	CDS	2410423	2411784	.	+	0	ID=cds2204;Parent=gene2241;Dbxref=Genbank:NP_626490.1,GeneID:1097674;Name=NP_626490.1;Note=SC1G2.03%2C probable glutamine synthetase (EC 6.3.1.2)%2C len: 453 aa. Highly similar to many other glutamine synthetases e.g. from Clostridium acetobutylicum SW:GLNA_CLOAB(EMBL:M18966) (443 aa)%2C fasta scores opt: 1017 z-score: 1188.9 E():0 44.4%25 identity in 446 aa overlap and Mycobacterium tuberculosis SW:GLN2_MYCTU(EMBL:Z70692) (446 aa)%2C fasta scores opt: 2114 z-score: 2469.2 E():0 70.2%25 identity in 453 aa overlap. Contains a Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase and a Prosite hit to PS00181 Glutamine synthetase ATP-binding region signature.;gbkey=CDS;gene=SC1G2.03;product=glutamine synthetase;protein_id=NP_626490.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2410474	2411490	.	+	.	ID=id2769;Dbxref=GeneID:1097674;Note=Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase%2C score 401.00%2C E-value 3.7e-127;gbkey=misc_feature;gene=SC1G2.03
NC_003888.3	RefSeq	sequence_feature	2411116	2411163	.	+	.	ID=id2770;Dbxref=GeneID:1097674;Note=PS00181 Glutamine synthetase ATP-binding region signature;gbkey=misc_feature;gene=SC1G2.03
NC_003888.3	RefSeq	gene	2411818	2412264	.	-	.	ID=gene2242;Dbxref=GeneID:1097675;Name=SC1G2.04c;gbkey=Gene;gene=SC1G2.04c;gene_biotype=protein_coding;gene_synonym=SC1G2.04c;locus_tag=SCO2242
NC_003888.3	RefSeq	CDS	2411818	2412264	.	-	0	ID=cds2205;Parent=gene2242;Dbxref=Genbank:NP_626491.1,GeneID:1097675;Name=NP_626491.1;Note=SC1G2.04c%2C possible membrane protein%2C len: 148 aa. Highly similar to a protein of undefined function from Streptomyces coelicolor TR:Q9Z550(EMBL:AL035212) SC9B2.09 (148 aa)%2C fasta scores opt: 727 z-score: 888.0 E():0 75.5%25 identity in 147 aa overlap. Contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1G2.04c;product=hypothetical protein;protein_id=NP_626491.1;transl_table=11
NC_003888.3	RefSeq	gene	2412355	2412933	.	+	.	ID=gene2243;Dbxref=GeneID:1097676;Name=SC1G2.05;gbkey=Gene;gene=SC1G2.05;gene_biotype=protein_coding;gene_synonym=SC1G2.05;locus_tag=SCO2243
NC_003888.3	RefSeq	CDS	2412355	2412933	.	+	0	ID=cds2206;Parent=gene2243;Dbxref=Genbank:NP_626492.1,GeneID:1097676;Name=NP_626492.1;Note=SC1G2.05%2C possible TetR-family transcriptional regulator%2C len: 192 aa. Similar to Bacillus subtilis TR:O34892 (EMBL:AF027868)  transcription regulator YobS (191 aa)%2C fasta scores opt: 179 z-score: 219.4 E(): 7.7e-05 27.9%25 identity in 165 aa overlap. Also highly similar to another transcriptional regulator from Streptomyces coelicolor TR:Q9Z551 (EMBL:AL035212) SC9B2.08C (192 aa)%2C fasta scores opt: 1071 z-score: 1249.2 E(): 0 87.0%25 identity in 192 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with a possible helix-turn-helix motif situated between residues 34..55 (+4.02 SD).;gbkey=CDS;gene=SC1G2.05;product=TetR family transcriptional regulator;protein_id=NP_626492.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2412406	2412546	.	+	.	ID=id2771;Dbxref=GeneID:1097676;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 28.50%2C E-value 3.7e-06;gbkey=misc_feature;gene=SC1G2.05
NC_003888.3	RefSeq	gene	2412958	2415018	.	-	.	ID=gene2244;Dbxref=GeneID:1097677;Name=SC1G2.06c;gbkey=Gene;gene=SC1G2.06c;gene_biotype=protein_coding;gene_synonym=SC1G2.06c;locus_tag=SCO2244
NC_003888.3	RefSeq	CDS	2412958	2415018	.	-	0	ID=cds2207;Parent=gene2244;Dbxref=Genbank:NP_626493.1,GeneID:1097677;Name=NP_626493.1;Note=SC1G2.06c%2C probable Ser/Thr protein kinase%2C len: 686 aa. Highly similar to many Ser/Thr protein kinases including: Streptomyces coelicolor SW:AFSK_STRCO (EMBL:D15062) AfsK (799 aa)%2C fasta scores opt: 818 z-score: 736.0 E():0 34.2%25 identity in 658 aa overlap and Thermomonospora curvata SW:PKWA_THECU (EMBL:U23820) PkwA (742 aa)%2C fasta scores opt: 1065 z-score: 956.9 E():0 37.0%25 identity in 763 aa overlap. Contains a Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and 3xPfam matches to entry PF00400 WD40%2C WD domain%2C G-beta repeat. Also contains Prosite hits to PS00017 ATP/GTP-binding site motif A (P-loop)%2C PS00678 Trp-Asp (WD) repeats signature%2C PS00108 Ser/Thr protein kinases active-site signature and PS00107 Protein kinases ATP-binding region signature.;gbkey=CDS;gene=SC1G2.06c;product=Ser/Thr protein kinase;protein_id=NP_626493.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2413180	2413284	.	-	.	ID=id2772;Dbxref=GeneID:1097677;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 5.60%2C E-value 10;gbkey=misc_feature;gene=SC1G2.06c
NC_003888.3	RefSeq	sequence_feature	2413306	2413419	.	-	.	ID=id2773;Dbxref=GeneID:1097677;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 29.50%2C E-value 7.6e-05;gbkey=misc_feature;gene=SC1G2.06c
NC_003888.3	RefSeq	sequence_feature	2413348	2413371	.	-	.	ID=id2774;Dbxref=GeneID:1097677;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1G2.06c
NC_003888.3	RefSeq	sequence_feature	2413858	2413902	.	-	.	ID=id2775;Dbxref=GeneID:1097677;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SC1G2.06c
NC_003888.3	RefSeq	sequence_feature	2413861	2413977	.	-	.	ID=id2776;Dbxref=GeneID:1097677;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 18.30%2C E-value 0.18;gbkey=misc_feature;gene=SC1G2.06c
NC_003888.3	RefSeq	sequence_feature	2414239	2414976	.	-	.	ID=id2777;Dbxref=GeneID:1097677;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 147.30%2C E-value 2.6e-40;gbkey=misc_feature;gene=SC1G2.06c
NC_003888.3	RefSeq	sequence_feature	2414584	2414622	.	-	.	ID=id2778;Dbxref=GeneID:1097677;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SC1G2.06c
NC_003888.3	RefSeq	sequence_feature	2414890	2414958	.	-	.	ID=id2779;Dbxref=GeneID:1097677;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SC1G2.06c
NC_003888.3	RefSeq	gene	2415027	2415236	.	-	.	ID=gene2245;Dbxref=GeneID:1097678;Name=SC1G2.07c;gbkey=Gene;gene=SC1G2.07c;gene_biotype=protein_coding;gene_synonym=SC1G2.07c;locus_tag=SCO2245
NC_003888.3	RefSeq	CDS	2415027	2415236	.	-	0	ID=cds2208;Parent=gene2245;Dbxref=Genbank:NP_626494.1,GeneID:1097678;Name=NP_626494.1;Note=SC1G2.07c%2C unknown%2C len: 69 aa. Similar to several proteins of undefined function from Streptomyces coelicolor including: TR:O86600(EMBL:AL031514) SC2H4.17C (81 aa)%2C fasta scores opt: 200 z-score: 296.9 E(): 3.7e-09 49.2%25 identity in 65 aa overlap%2C TR:O86677(EMBL:AL031371) SC4G2.04 (67 aa)%2C fasta scores opt: 170 z-score: 256.6 E(): 6.5e-07 55.6%25 identity in 54 aa overlap and TR:Q9Z544(EMBL:AL035212) SC9B2.15C (77 aa)%2C fasta scores opt: 165 z-score: 248.7 E(): 1.8e-06 55.1%25 identity in 49 aa overlap. Also similar to OrfD located within a novel antibiotic regulatory locus%2C abaA%2C in Streptomyces coelicolor TR:Q53896(EMBL:X60316) (75 aa)%2C fasta scores opt: 125 z-score: 193.4 E(): 0.0022 37.0%25 identity in 54 aa overlap. This gene is duplicated on this cosmid and shares 74 %25 identity%2C in 65 aa overlap%2C with the downstream gene%2C SC1G2.14c.;gbkey=CDS;gene=SC1G2.07c;product=hypothetical protein;protein_id=NP_626494.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2415041	2416189	.	-	.	ID=id2780;Note=This repeat unit is 77.54 %25 identical in a 1153 nt overlap with the duplicate region 10249..11397.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2415308	2416084	.	-	.	ID=gene2246;Dbxref=GeneID:1097679;Name=SC1G2.08c;gbkey=Gene;gene=SC1G2.08c;gene_biotype=protein_coding;gene_synonym=SC1G2.08c;locus_tag=SCO2246
NC_003888.3	RefSeq	CDS	2415308	2416084	.	-	0	ID=cds2209;Parent=gene2246;Dbxref=Genbank:NP_626495.1,GeneID:1097679;Name=NP_626495.1;Note=SC1G2.08c%2C unknown%2C len: 258 aa. Similar to several proteins of undefined function from Streptomyces coelicolor including: TR:O86676(EMBL:AL031371) SC4G2.03 (277 aa)%2C fasta scores opt: 604 z-score: 734.8 E():0 46.3%25 identity in 229 aa overlap and TR:Q9X8M2(EMBL:AL049628) SCE94.16C (280 aa)%2C fasta scores opt: 469 z-score: 572.0 E(): 1.8e-24 35.2%25 identity in 230 aa overlap. This gene is duplicated on this cosmid and shares 76.1 %25 identity%2C in 259 aa overlap%2C with the downstream gene%2C SC1G2.15c.;gbkey=CDS;gene=SC1G2.08c;product=hypothetical protein;protein_id=NP_626495.1;transl_table=11
NC_003888.3	RefSeq	gene	2416129	2416314	.	-	.	ID=gene2247;Dbxref=GeneID:1097680;Name=SC1G2.09c;gbkey=Gene;gene=SC1G2.09c;gene_biotype=protein_coding;gene_synonym=SC1G2.09c;locus_tag=SCO2247
NC_003888.3	RefSeq	CDS	2416129	2416314	.	-	0	ID=cds2210;Parent=gene2247;Dbxref=Genbank:NP_626496.1,GeneID:1097680;Name=NP_626496.1;Note=SC1G2.09c%2C unknown%2C len: 61 aa.;gbkey=CDS;gene=SC1G2.09c;product=hypothetical protein;protein_id=NP_626496.1;transl_table=11
NC_003888.3	RefSeq	gene	2416596	2417093	.	+	.	ID=gene2248;Dbxref=GeneID:1097681;Name=SC1G2.10;gbkey=Gene;gene=SC1G2.10;gene_biotype=protein_coding;gene_synonym=SC1G2.10;locus_tag=SCO2248
NC_003888.3	RefSeq	CDS	2416596	2417093	.	+	0	ID=cds2211;Parent=gene2248;Dbxref=Genbank:NP_626497.1,GeneID:1097681;Name=NP_626497.1;Note=SC1G2.10%2C hypothetical protein%2C len: 165 aa%3B similar to TR:Q9RD82 (EMBL:AL136502) Streptomyces coelicolor hypothetical protein SCF43.06%2C 164 aa%3B fasta scores: opt: 669 Z-score: 833.5 E(): 8.6e-39%3B 60.736%25 identity in 163 aa overlap;gbkey=CDS;gene=SC1G2.10;product=hypothetical protein;protein_id=NP_626497.1;transl_table=11
NC_003888.3	RefSeq	gene	2417492	2417722	.	+	.	ID=gene2249;Dbxref=GeneID:1097682;Name=SC1G2.11;gbkey=Gene;gene=SC1G2.11;gene_biotype=protein_coding;gene_synonym=SC1G2.11;locus_tag=SCO2249
NC_003888.3	RefSeq	CDS	2417492	2417722	.	+	0	ID=cds2212;Parent=gene2249;Dbxref=Genbank:NP_626498.1,GeneID:1097682;Name=NP_626498.1;Note=SC1G2.11%2C unknown%2C len: 76 aa.;gbkey=CDS;gene=SC1G2.11;product=hypothetical protein;protein_id=NP_626498.1;transl_table=11
NC_003888.3	RefSeq	gene	2417879	2418706	.	+	.	ID=gene2250;Dbxref=GeneID:1097683;Name=SC1G2.12;gbkey=Gene;gene=SC1G2.12;gene_biotype=protein_coding;gene_synonym=SC1G2.12;locus_tag=SCO2250
NC_003888.3	RefSeq	CDS	2417879	2418706	.	+	0	ID=cds2213;Parent=gene2250;Dbxref=Genbank:NP_626499.1,GeneID:1097683;Name=NP_626499.1;Note=SC1G2.12%2C unknown%2C len: 275 aa. Weakly similar to a protein of undefined function from Mycobacterium tuberculosis TR:O07720(EMBL:Z97193) hypothetical 26.9 KD protein (250 aa)%2C fasta scores 0pt: 176 z-score: 214.1 E(): 0.00015 28.4%25 identity in 250 aa overlap.;gbkey=CDS;gene=SC1G2.12;product=hypothetical protein;protein_id=NP_626499.1;transl_table=11
NC_003888.3	RefSeq	gene	2418753	2419427	.	+	.	ID=gene2251;Dbxref=GeneID:1097684;Name=SC1G2.13;gbkey=Gene;gene=SC1G2.13;gene_biotype=protein_coding;gene_synonym=SC1G2.13;locus_tag=SCO2251
NC_003888.3	RefSeq	CDS	2418753	2419427	.	+	0	ID=cds2214;Parent=gene2251;Dbxref=Genbank:NP_626500.1,GeneID:1097684;Name=NP_626500.1;Note=SC1G2.13%2C possible integral membrane protein%2C len: 224 aa. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1G2.13;product=hypothetical protein;protein_id=NP_626500.1;transl_table=11
NC_003888.3	RefSeq	gene	2419411	2419632	.	-	.	ID=gene2252;Dbxref=GeneID:1097685;Name=SC1G2.14c;gbkey=Gene;gene=SC1G2.14c;gene_biotype=protein_coding;gene_synonym=SC1G2.14c;locus_tag=SCO2252
NC_003888.3	RefSeq	CDS	2419411	2419632	.	-	0	ID=cds2215;Parent=gene2252;Dbxref=Genbank:NP_626501.1,GeneID:1097685;Name=NP_626501.1;Note=SC1G2.14c%2C unknown%2C len: 69 aa. Similar to several proteins of undefined function from Streptomyces coelicolor including: TR:O86600(EMBL:AL031514) SC2H4.17C (81 aa)%2C fasta scores opt: 219 z-score: 324.3 E(): 1.1e-10 64.7%25 identity in 51 aa overlap%2C TR:O86677(EMBL:AL031371) SC4G2.04 (67 aa)%2C fasta scores opt: 184 z-score: 276.9 E(): 4.8e-08 46.0%25 identity in 63 aa overlap and TR:Q9Z544(EMBL:AL035212) SC9B2.15C (77 aa)%2C fasta scores opt: 168 z-score: 253.6 E(): 9.6e-07 51.0%25 identity in 49 aa overlap. Also similar to OrfD located within a novel antibiotic regulatory locus%2C abaA%2C in Streptomyces coelicolor TR:Q53896(EMBL:X60316) (75 aa)%2C fasta scores opt: 124 z-score: 192.5 E(): 0.0024 42.0%25 identity in 50 aa overlap. This gene is duplicated on this cosmid and shares 74 %25 identity%2C in 50 aa overlap%2C with the upstream gene%2C SC1G2.07c.;gbkey=CDS;gene=SC1G2.14c;product=hypothetical protein;protein_id=NP_626501.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2419439	2420587	.	-	.	ID=id2781;Note=This repeat unit is 77.54 %25 identical in a 1153 nt overlap with the duplicate region 5851..6999.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2419629	2420483	.	-	.	ID=gene2253;Dbxref=GeneID:1097686;Name=SC1G2.15c;gbkey=Gene;gene=SC1G2.15c;gene_biotype=protein_coding;gene_synonym=SC1G2.15c;locus_tag=SCO2253
NC_003888.3	RefSeq	CDS	2419629	2420483	.	-	0	ID=cds2216;Parent=gene2253;Dbxref=Genbank:NP_626502.1,GeneID:1097686;Name=NP_626502.1;Note=SC1G2.15c%2C unknown%2C len: 258 aa. Similar to several proteins of undefined function from Streptomyces coelicolor including: TR:O86676(EMBL:AL031371) SC4G2.03 (277 aa)%2C fasta scores opt: 758 z-score: 919.8 E():0 46.7%25 identity in 276 aa overlap and TR:Q9X8M2(EMBL:AL049628) SCE94.16C (280 aa)%2C fasta scores opt: 476 z-score: 580.1 E(): 6.2e-25 32.7%25 identity in 260 aa overlap. This gene is duplicated on this cosmid and shares 76.1 %25 identity%2C in 259 aa overlap%2C with the upstream gene%2C SC1G2.08c.;gbkey=CDS;gene=SC1G2.15c;product=hypothetical protein;protein_id=NP_626502.1;transl_table=11
NC_003888.3	RefSeq	gene	2420563	2421804	.	-	.	ID=gene2254;Dbxref=GeneID:1097687;Name=SC1G2.16c;gbkey=Gene;gene=SC1G2.16c;gene_biotype=protein_coding;gene_synonym=SC1G2.16c;locus_tag=SCO2254
NC_003888.3	RefSeq	CDS	2420563	2421804	.	-	0	ID=cds2217;Parent=gene2254;Dbxref=Genbank:NP_626503.1,GeneID:1097687;Name=NP_626503.1;Note=SC1G2.16c.possible transmembrane efflux protein%2C len: 413 aa. Highly similar to many transmembrane transport proteins e.g. Streptomyces lividans SW:CMLR_STRLI(EMBL:X59968) chloramphenicol resistance protein CmlR (392 aa)%2C fasta scores opt: 743 z-score: 769.2 E():0 35.8%25 identity in 377 aa overlap and Streptomyces coelicolor TR:Q9X8V1(EMBL:AL049826)  transmembrane efflux protein SCH24.37 (404 aa)%2C fasta scores opt: 1313 z-score: 1352.1 E(): 0 52.0%25 identity in 408 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1G2.16c;product=transmembrane efflux protein;protein_id=NP_626503.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2420611	2421798	.	-	.	ID=id2782;Dbxref=GeneID:1097687;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -74.00%2C E-value 0.00032;gbkey=misc_feature;gene=SC1G2.16c
NC_003888.3	RefSeq	gene	2421926	2422978	.	-	.	ID=gene2255;Dbxref=GeneID:1097688;Name=SC1G2.17c;gbkey=Gene;gene=SC1G2.17c;gene_biotype=protein_coding;gene_synonym=SC1G2.17c,SCC75A.01c;locus_tag=SCO2255
NC_003888.3	RefSeq	CDS	2421926	2422978	.	-	0	ID=cds2218;Parent=gene2255;Dbxref=Genbank:NP_733566.1,GeneID:1097688;Name=NP_733566.1;Note=SCC75A.01c%2C possible membrane protein%2C partial CDS%2C len: > 268 aa. Highly similar to another membrane protein from Streptomyces coelicolor TR:CAB45459(EMBL:AL079348) SC66T3.03 (330 aa)%2C fasta scores opt: 695 z-score: 823.4 E():0 54.8%25 identity in 241 aa overlap. Contains possible membrane spanning hydrophobic domains.~SC1G2.17c%2C unknown%2C partial CDS%2C len: > 116 aa. Highly similar to the C-terminus of Streptomyces coelicolor TR:Q9XAL0(EMBL:AL079348) membrane protein SC66T3.03 (330 aa)%2C fasta scores opt: 472 z-score: 600.5 E(): 4.6e-26 66.1%25 identity in 109 aa overlap.;gbkey=CDS;gene=SC1G2.17c;product=hypothetical protein;protein_id=NP_733566.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2422986	2422989	.	-	.	ID=id2783;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2423284	2423289	.	+	.	ID=id2784;gbkey=RBS
NC_003888.3	RefSeq	gene	2423298	2424173	.	+	.	ID=gene2256;Dbxref=GeneID:1097689;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=SCO2256
NC_003888.3	RefSeq	CDS	2423298	2424173	.	+	0	ID=cds2219;Parent=gene2256;Dbxref=Genbank:NP_626504.1,GeneID:1097689;Name=NP_626504.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=NP_626504.1;transl_table=11
NC_003888.3	RefSeq	gene	2424293	2425390	.	+	.	ID=gene2257;Dbxref=GeneID:1097690;Name=SCC75A.03;gbkey=Gene;gene=SCC75A.03;gene_biotype=protein_coding;gene_synonym=SCC75A.03;locus_tag=SCO2257
NC_003888.3	RefSeq	CDS	2424293	2425390	.	+	0	ID=cds2220;Parent=gene2257;Dbxref=Genbank:NP_626505.1,GeneID:1097690;Name=NP_626505.1;Note=SCC75A.03%2C probable ABC transporter%2C ATP-binding component%2C len: 365 aa. Highly similar to many ABC transporters e.g. Streptomyces peucetius SW:DRRA_STRPE(EMBL:M73758) daunorubicin resistance ATP-binding protein (330 aa)%2C fasta scores opt: 922 z-score: 1009.0 E():0 48.9%25 identity in 329 aa overlap and Streptomyces antibioticus TR:Q53716(EMBL:L06249) ATP-binding protein OLEC-ORF4 involved in oleandomycin-resistance (325 aa)%2C fasta scores opt: 1883 z-score: 2052.8 E():0 89.7%25 identity in 329 aa overlap. Also similar to several Streptomyces coelicolor ABC transporter ATP-binding components e.g TR:CAB42771(EMBL:AL049841) SCE9.25C (315 aa)%2C fasta scores opt: 1031 z-score: 1127.7 E():0 54.4%25 identity in 318 aa overlap. Contains Prosite hits to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains a Pfam match to entry PF00005 ABC_tran%2C ABC transporter.;gbkey=CDS;gene=SCC75A.03;product=ABC transporter ATP-binding protein;protein_id=NP_626505.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2424476	2425021	.	+	.	ID=id2785;Dbxref=GeneID:1097690;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 189.70%2C E-value 4.5e-53;gbkey=misc_feature;gene=SCC75A.03
NC_003888.3	RefSeq	sequence_feature	2424497	2424520	.	+	.	ID=id2786;Dbxref=GeneID:1097690;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC75A.03
NC_003888.3	RefSeq	sequence_feature	2424794	2424838	.	+	.	ID=id2787;Dbxref=GeneID:1097690;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCC75A.03
NC_003888.3	RefSeq	ribosome_entry_site	2425374	2425380	.	+	.	ID=id2788;Dbxref=GeneID:1097690;gbkey=RBS;gene=SCC75A.03
NC_003888.3	RefSeq	gene	2425387	2426211	.	+	.	ID=gene2258;Dbxref=GeneID:1097691;Name=SCC75A.04;gbkey=Gene;gene=SCC75A.04;gene_biotype=protein_coding;gene_synonym=SCC75A.04;locus_tag=SCO2258
NC_003888.3	RefSeq	CDS	2425387	2426211	.	+	0	ID=cds2221;Parent=gene2258;Dbxref=Genbank:NP_626506.1,GeneID:1097691;Name=NP_626506.1;Note=SCC75A.04%2C probable ABC-transporter%2C transmembrane component%2C len: 274 aa. Similar to many transport proteins including: Streptomyces peucetius SW:DRRB_STRPE(EMBL:M73758) daunorubicin resistance transmembrane protein (283 aa)%2C fasta scores opt: 523 z-score: 593.2 E(): 1.2e-25 35.1%25 identity in 245 aa overlap and Streptomyces antibioticus TR:Q53717(EMBL:L06249) membrane protein OLEC-ORF5 involved in oleandomycin-resistance (273 aa)%2C fasta scores opt: 1502 z-score: 1685.2 E():0 83.2%25 identity in 274 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC75A.04;product=ABC transporter;protein_id=NP_626506.1;transl_table=11
NC_003888.3	RefSeq	gene	2426233	2430237	.	-	.	ID=gene2259;Dbxref=GeneID:1097692;Name=SCC75A.05c;gbkey=Gene;gene=SCC75A.05c;gene_biotype=protein_coding;gene_synonym=SCC75A.05c;locus_tag=SCO2259
NC_003888.3	RefSeq	CDS	2426233	2430237	.	-	0	ID=cds2222;Parent=gene2259;Dbxref=Genbank:NP_626507.1,GeneID:1097692;Name=NP_626507.1;Note=SCC75A.05c%2C possible multi-domain regulatory protein%2C len: 1334 aa. Similar in parts to many regulators. Similar in the N-terminus to Streptomyces coelicolor SW:AFSR_STRCO (EMBL:D90155) regulatory protein AfsR (993 aa)%2C fasta scores opt: 524 z-score: 356.0 E(): 1.9e-12 37.0%25 identity in 316 aa overlap. Similar in the C-terminus to many other proposed regulators e.g. Mycobacterium tuberculosis TR:O53720 (EMBL:AL021931) transcriptional regulatory protein (1085 aa)%2C fasta scores opt: 809 z-score: 541.8 E(): 8.3e-23 34.1%25 identity in 883 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a highly degenerate repeat region with 16x PA(P/S)G and 5x APG. This repeat region also has a notably higher GC content (83.4%25). Contains probable coiled-coils between residues 867 to 904 (38 residues) and 1093 to 1121 (29 residues).;gbkey=CDS;gene=SCC75A.05c;product=multidomain-containing protein family;protein_id=NP_626507.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2428639	2428662	.	-	.	ID=id2789;Dbxref=GeneID:1097692;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC75A.05c
NC_003888.3	RefSeq	repeat_region	2428796	2429459	.	-	.	ID=id2790;Dbxref=GeneID:1097692;Note=Highly degenerate repeat region with a notably higher GC content (83.4%25).;gbkey=repeat_region;gene=SCC75A.05c
NC_003888.3	RefSeq	gene	2430388	2431185	.	+	.	ID=gene2260;Dbxref=GeneID:1097693;Name=SCC75A.06;gbkey=Gene;gene=SCC75A.06;gene_biotype=protein_coding;gene_synonym=SCC75A.06;locus_tag=SCO2260
NC_003888.3	RefSeq	CDS	2430388	2431185	.	+	0	ID=cds2223;Parent=gene2260;Dbxref=Genbank:NP_626508.1,GeneID:1097693;Name=NP_626508.1;Note=SCC75A.06%2C possible membrane protein%2C len: 265 aa. Highly similar to a protein of undefined function from Mycobacterium tuberculosis TR:O06309(EMBL:Z95324) (259 aa)%2C fasta scores opt: 646 z-score: 795.3 E():0 42.9%25 identity in 259 aa overlap. Contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC75A.06;product=hypothetical protein;protein_id=NP_626508.1;transl_table=11
NC_003888.3	RefSeq	gene	2431192	2431449	.	-	.	ID=gene2261;Dbxref=GeneID:1097694;Name=SCC75A.07c;gbkey=Gene;gene=SCC75A.07c;gene_biotype=protein_coding;gene_synonym=SCC75A.07c;locus_tag=SCO2261
NC_003888.3	RefSeq	CDS	2431192	2431449	.	-	0	ID=cds2224;Parent=gene2261;Dbxref=Genbank:NP_626509.1,GeneID:1097694;Name=NP_626509.1;Note=SCC75A.07c%2C possible membrane protein%2C len: 85 aa. Contains a possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC75A.07c;product=hypothetical protein;protein_id=NP_626509.1;transl_table=11
NC_003888.3	RefSeq	gene	2431446	2432165	.	-	.	ID=gene2262;Dbxref=GeneID:1097695;Name=SCC75A.08c;gbkey=Gene;gene=SCC75A.08c;gene_biotype=protein_coding;gene_synonym=SCC75A.08c;locus_tag=SCO2262
NC_003888.3	RefSeq	CDS	2431446	2432165	.	-	0	ID=cds2225;Parent=gene2262;Dbxref=Genbank:NP_626510.1,GeneID:1097695;Name=NP_626510.1;Note=SCC75A.08c%2C possible oxidoreductase%2C len: 239 aa. Similar to several including: Methanobacterium thermoautotrophicum TR:O59661(EMBL:Y17210) F420-dependent NADP reductase (224 aa)%2C fasta scores opt: 257 z-score: 283.4 E(): 2.1e-08 38.3%25 identity in 222 aa overlap and Archaeoglobus fulgidus TR:O29059(EMBL:AE001021) conserved hypothetical protein (213 aa)%2C fasta scores opt: 397 z-score: 431.0 E(): 1.2e-16 37.3%25 identity in 204 aa overlap.;gbkey=CDS;gene=SCC75A.08c;product=oxidoreductase;protein_id=NP_626510.1;transl_table=11
NC_003888.3	RefSeq	gene	2432297	2432911	.	+	.	ID=gene2263;Dbxref=GeneID:1097696;Name=SCC75A.09;gbkey=Gene;gene=SCC75A.09;gene_biotype=protein_coding;gene_synonym=SCC75A.09;locus_tag=SCO2263
NC_003888.3	RefSeq	CDS	2432297	2432911	.	+	0	ID=cds2226;Parent=gene2263;Dbxref=Genbank:NP_626511.1,GeneID:1097696;Name=NP_626511.1;Note=SCC75A.09%2C unknown%2C len: 204 aa. Weakly similar to Streptomyces coelicolor TR:CAB45617(EMBL:AL079356) hypothetical 29.3 KD protein SC6G9.26C (274 aa)%2C fasta scores opt: 125 z-score: 153.0 E(): 0.38 32.8%25 identity in 189 aa overlap.;gbkey=CDS;gene=SCC75A.09;product=hypothetical protein;protein_id=NP_626511.1;transl_table=11
NC_003888.3	RefSeq	gene	2433311	2434606	.	+	.	ID=gene2264;Dbxref=GeneID:1097697;Name=SCC75A.10;gbkey=Gene;gene=SCC75A.10;gene_biotype=protein_coding;gene_synonym=SCC75A.10;locus_tag=SCO2264
NC_003888.3	RefSeq	CDS	2433311	2434606	.	+	0	ID=cds2227;Parent=gene2264;Dbxref=Genbank:NP_626512.1,GeneID:1097697;Name=NP_626512.1;Note=SCC75A.10%2C possible integral membrane protein%2C len: 431 aa. Weakly similar to Mycobacterium smegmatis TR:O31137(EMBL:AF030344) tetracycline-resistance determinant (419 aa)%2C fasta scores opt: 330 z-score: 364.8 E(): 6e-13 24.2%25 identity in 414 aa overlap. Highly similar to Streptomyces coelicolor TR:O69821(EMBL:AL023496) transmembrane protein SC1A6.16 (431 aa)%2C fasta scores opt: 1808 z-score: 1971.5 E():0 64.7%25 identity in 419 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC75A.10;product=hypothetical protein;protein_id=NP_626512.1;transl_table=11
NC_003888.3	RefSeq	gene	2434607	2434885	.	-	.	ID=gene2265;Dbxref=GeneID:1097698;Name=SCC75A.11c;gbkey=Gene;gene=SCC75A.11c;gene_biotype=protein_coding;gene_synonym=SCC75A.11c;locus_tag=SCO2265
NC_003888.3	RefSeq	CDS	2434607	2434885	.	-	0	ID=cds2228;Parent=gene2265;Dbxref=Genbank:NP_626513.1,GeneID:1097698;Name=NP_626513.1;Note=SCC75A.11c%2C unknown%2C len: 92 aa.;gbkey=CDS;gene=SCC75A.11c;product=hypothetical protein;protein_id=NP_626513.1;transl_table=11
NC_003888.3	RefSeq	gene	2434908	2435765	.	+	.	ID=gene2266;Dbxref=GeneID:1097699;Name=map3;gbkey=Gene;gene=map3;gene_biotype=protein_coding;gene_synonym=map3;locus_tag=SCO2266
NC_003888.3	RefSeq	CDS	2434908	2435765	.	+	0	ID=cds2229;Parent=gene2266;Dbxref=Genbank:NP_626514.1,GeneID:1097699;Name=NP_626514.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;gene=map3;product=methionine aminopeptidase;protein_id=NP_626514.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2435025	2435747	.	+	.	ID=id2791;Dbxref=GeneID:1097699;Note=Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24%2C score 246.30%2C E-value 4.4e-70;gbkey=misc_feature;gene=map3
NC_003888.3	RefSeq	gene	2435930	2436577	.	+	.	ID=gene2267;Dbxref=GeneID:1097700;Name=SCC75A.13;gbkey=Gene;gene=SCC75A.13;gene_biotype=protein_coding;gene_synonym=SCC75A.13;locus_tag=SCO2267
NC_003888.3	RefSeq	CDS	2435930	2436577	.	+	0	ID=cds2230;Parent=gene2267;Dbxref=Genbank:NP_626515.1,GeneID:1097700;Name=NP_626515.1;Note=SCC75A.13%2C probable heme oxygenase%2C len: 215 aa. Highly similar to many Eukaryotic and several Prokaryotic heme oxygenases including: Gallus gallus (Chicken) SW:HO_CHICK (EMBL:X56201) (296 aa)%2C fasta scores opt: 485 z-score: 601.9 E(): 3.8e-26 37.6%25 identity in 205 aa overlap and Corynebacterium diphtheriae SW:HMUO_CORDI (EMBL:U73860)(215 aa)%2C fasta scores opt: 463 z-score: 577.0 E(): 9.2e-25 41.5%25 identity in 205 aa overlap. Contains a Pfam match to entry PF01126 Heme_oxygenase%2C Heme oxygenase.;gbkey=CDS;gene=SCC75A.13;product=heme oxygenase;protein_id=NP_626515.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2435930	2436574	.	+	.	ID=id2792;Dbxref=GeneID:1097700;Note=Pfam match to entry PF01126 Heme_oxygenase%2C Heme oxygenase%2C score 98.80%2C E-value 1.1e-25;gbkey=misc_feature;gene=SCC75A.13
NC_003888.3	RefSeq	gene	2436593	2437237	.	-	.	ID=gene2268;Dbxref=GeneID:1097701;Name=SCC75A.14c;gbkey=Gene;gene=SCC75A.14c;gene_biotype=protein_coding;gene_synonym=SCC75A.14c;locus_tag=SCO2268
NC_003888.3	RefSeq	CDS	2436593	2437237	.	-	0	ID=cds2231;Parent=gene2268;Dbxref=Genbank:NP_626516.1,GeneID:1097701;Name=NP_626516.1;Note=SCC75A.14c%2C unknown%2C len: 214 aa. Highly similar to Mycobacterium tuberculosis SW:YR16_MYCTU (EMBL:Z96072) hypothetical 24.6 KD protein (228 aa)%2C fasta scores: opt: 447 z-score: 555.4 E(): 1.5e-23 44.1%25 identity in 220 aa overlap and to the C-terminus of Mycobacterium tuberculosis SW:TYSY_MYCTU (EMBL:X59273) thymidylate synthase (EC 2.1.1.45) (450 aa)%2C fasta scores opt: 447 z-score: 550.9 E(): 2.6e-23 44.1%25 identity in 220 aa overlap;gbkey=CDS;gene=SCC75A.14c;product=hypothetical protein;protein_id=NP_626516.1;transl_table=11
NC_003888.3	RefSeq	gene	2437246	2438073	.	-	.	ID=gene2269;Dbxref=GeneID:1097702;Name=SCC75A.15c;gbkey=Gene;gene=SCC75A.15c;gene_biotype=protein_coding;gene_synonym=SCC75A.15c;locus_tag=SCO2269
NC_003888.3	RefSeq	CDS	2437246	2438073	.	-	0	ID=cds2232;Parent=gene2269;Dbxref=Genbank:NP_626517.1,GeneID:1097702;Name=NP_626517.1;Note=SCC75A.15c%2C unknown%2C len: 275 aa.;gbkey=CDS;gene=SCC75A.15c;product=hypothetical protein;protein_id=NP_626517.1;transl_table=11
NC_003888.3	RefSeq	gene	2438127	2439746	.	-	.	ID=gene2270;Dbxref=GeneID:1097703;Name=SCC75A.16c;gbkey=Gene;gene=SCC75A.16c;gene_biotype=protein_coding;gene_synonym=SCC75A.16c;locus_tag=SCO2270
NC_003888.3	RefSeq	CDS	2438127	2439746	.	-	0	ID=cds2233;Parent=gene2270;Dbxref=Genbank:NP_626518.1,GeneID:1097703;Name=NP_626518.1;Note=SCC75A.16c%2C possible membrane protein%2C len: 539 aa. Contains a possible N-terminal signal sequence%2C a possible membrane spanning hydrophobic domain and is rich in amino acids Ala%2C Gly and Thr.;gbkey=CDS;gene=SCC75A.16c;product=hypothetical protein;protein_id=NP_626518.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2439756	2439760	.	-	.	ID=id2793;gbkey=RBS
NC_003888.3	RefSeq	gene	2439787	2441220	.	-	.	ID=gene2271;Dbxref=GeneID:1097704;Name=SCC75A.17c;gbkey=Gene;gene=SCC75A.17c;gene_biotype=protein_coding;gene_synonym=SCC75A.17c;locus_tag=SCO2271
NC_003888.3	RefSeq	CDS	2439787	2441220	.	-	0	ID=cds2234;Parent=gene2271;Dbxref=Genbank:NP_626519.1,GeneID:1097704;Name=NP_626519.1;Note=SCC75A.17c%2C possible membrane protein%2C len: 539 aa. Contains a possible N-terminal signal sequence%2C a possible membrane spanning hydrophobic domain and is rich in the amino acid Ala.;gbkey=CDS;gene=SCC75A.17c;product=hypothetical protein;protein_id=NP_626519.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2441228	2441232	.	-	.	ID=id2794;gbkey=RBS
NC_003888.3	RefSeq	gene	2441324	2442376	.	+	.	ID=gene2272;Dbxref=GeneID:1097705;Name=SCC75A.18;gbkey=Gene;gene=SCC75A.18;gene_biotype=protein_coding;gene_synonym=SCC75A.18;locus_tag=SCO2272
NC_003888.3	RefSeq	CDS	2441324	2442376	.	+	0	ID=cds2235;Parent=gene2272;Dbxref=Genbank:NP_626520.1,GeneID:1097705;Name=NP_626520.1;Note=SCC75A.18%2C binding-protein-dependent transport lipoprotein%2C len: 350 aa. Similar to many proteins involved in iron acquisition including: Yersinia pestis SW:HMUT_YERPE(EMBL:U60647) hemin-binding periplasmic protein HmuT precursor (278 aa)%2C fasta scores opt: 462 z-score: 474.0 E(): 5e-19 33.3%25 identity in 258 aa overlap and Corynebacterium diphtheriae TR:AAD37493(EMBL:AF109162) probable lipoprotein heme receptor HmuT (353 aa)%2C fasta scores opt: 670 z-score: 680.9 E(): 1.5e-30 37.2%25 identity in 339 aa overlap. Contains a Pfam match to entry PF01497 Peripla_BP_2%2C Periplasmic binding protein and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC75A.18;product=binding-protein-dependent transport lipoprotein;protein_id=NP_626520.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2441366	2441398	.	+	.	ID=id2795;Dbxref=GeneID:1097705;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCC75A.18
NC_003888.3	RefSeq	sequence_feature	2441585	2442295	.	+	.	ID=id2796;Dbxref=GeneID:1097705;Note=Pfam match to entry PF01497 Peripla_BP_2%2C Periplasmic binding protein%2C score 117.30%2C E-value 2.9e-31;gbkey=misc_feature;gene=SCC75A.18
NC_003888.3	RefSeq	ribosome_entry_site	2442359	2442362	.	+	.	ID=id2797;Dbxref=GeneID:1097705;gbkey=RBS;gene=SCC75A.18
NC_003888.3	RefSeq	gene	2442373	2443464	.	+	.	ID=gene2273;Dbxref=GeneID:1097706;Name=SCC75A.19;gbkey=Gene;gene=SCC75A.19;gene_biotype=protein_coding;gene_synonym=SCC75A.19;locus_tag=SCO2273
NC_003888.3	RefSeq	CDS	2442373	2443464	.	+	0	ID=cds2236;Parent=gene2273;Dbxref=Genbank:NP_626521.1,GeneID:1097706;Name=NP_626521.1;Note=SCC75A.19%2C FecCD-family membrane transport protein%2C len: 363 aa. Highly similar to proteins involved in iron acquisition including: Yersinia pestis SW:HMUU_YERPE(EMBL:U60647) hemin transport system permease HmuU (334 aa)%2C fasta scores: opt: 855 z-score: 924.4 E():0 45.9%25 identity in 290 aa overlap and Corynebacterium diphtheriae TR:AAD37494(EMBL:AF109162) BC-type transporter permease (350 aa)%2C fasta scores opt: 1006 z-score: 1085.8 E():0 47.2%25 identity in 339 aa overlap. Contains a Pfam match to entry PF01032 FecCD_family%2C FecCD transport family and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC75A.19;product=FecCD-family membrane transport protein;protein_id=NP_626521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2442514	2443434	.	+	.	ID=id2798;Dbxref=GeneID:1097706;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 390.50%2C E-value 1.6e-113;gbkey=misc_feature;gene=SCC75A.19
NC_003888.3	RefSeq	ribosome_entry_site	2443450	2443454	.	+	.	ID=id2799;Dbxref=GeneID:1097706;gbkey=RBS;gene=SCC75A.19
NC_003888.3	RefSeq	gene	2443461	2444303	.	+	.	ID=gene2274;Dbxref=GeneID:1097707;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;gene_synonym=SCC75A.20;locus_tag=SCO2274
NC_003888.3	RefSeq	CDS	2443461	2444303	.	+	0	ID=cds2237;Parent=gene2274;Dbxref=Genbank:NP_626522.1,GeneID:1097707;Name=NP_626522.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin importer ATP-binding subunit;protein_id=NP_626522.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2443614	2444168	.	+	.	ID=id2800;Dbxref=GeneID:1097707;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 188.20%2C E-value 1.3e-52;gbkey=misc_feature;gene=hmuV
NC_003888.3	RefSeq	sequence_feature	2443635	2443658	.	+	.	ID=id2801;Dbxref=GeneID:1097707;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=hmuV
NC_003888.3	RefSeq	sequence_feature	2443941	2443985	.	+	.	ID=id2802;Dbxref=GeneID:1097707;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=hmuV
NC_003888.3	RefSeq	gene	2444536	2445690	.	+	.	ID=gene2275;Dbxref=GeneID:1097708;Name=SCC75A.21;gbkey=Gene;gene=SCC75A.21;gene_biotype=protein_coding;gene_synonym=SCC75A.21;locus_tag=SCO2275
NC_003888.3	RefSeq	CDS	2444536	2445690	.	+	0	ID=cds2238;Parent=gene2275;Dbxref=Genbank:NP_626523.1,GeneID:1097708;Name=NP_626523.1;Note=SCC75A.21%2C possible lipoprotein%2C len: 384 aa. Similar to several proteins of undefined function including: Escherichia coli TR:BAA35799(EMBL:D90739) (362 aa)%2C fasta scores opt: 783 z-score: 851.0 E():0 39.2%25 identity in 365 aa overlap and Bacillus subtilis SW:YWBM_BACSU(EMBL:X73124) (385 aa)%2C fasta scores opt: 675 z-score: 734.3 E():0 34.9%25 identity in 387 aa overlap. Contains a N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCC75A.21;product=lipoprotein;protein_id=NP_626523.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2444575	2444607	.	+	.	ID=id2803;Dbxref=GeneID:1097708;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCC75A.21
NC_003888.3	RefSeq	gene	2445705	2446967	.	+	.	ID=gene2276;Dbxref=GeneID:1097709;Name=SCC75A.22;gbkey=Gene;gene=SCC75A.22;gene_biotype=protein_coding;gene_synonym=SCC75A.22;locus_tag=SCO2276
NC_003888.3	RefSeq	CDS	2445705	2446967	.	+	0	ID=cds2239;Parent=gene2276;Dbxref=Genbank:NP_626524.1,GeneID:1097709;Name=NP_626524.1;Note=SCC75A.22%2C possible membrane protein%2C len: 420 aa. Similar to several proteins of undefined function including: Bacillus subtilis SW:YWBN_BACSU(EMBL:X73124) (416 aa)%2C fasta scores opt: 1076 z-score: 1183.4 E(): 0 42.7%25 identity in 405 aa overlap and Streptomyces coelicolor TR:Q9ZBW9(EMBL:AL034355) SCD78.30c (445 aa)%2C fasta scores opt:584 z-score: 643.8 E(): 1.7e-28 43.2%25 identity in 428 aa overlap. Contains a possible N-terminal membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCC75A.22;product=hypothetical protein;protein_id=NP_626524.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2446956	2446962	.	+	.	ID=id2804;Dbxref=GeneID:1097709;gbkey=RBS;gene=SCC75A.22
NC_003888.3	RefSeq	gene	2446970	2447842	.	+	.	ID=gene2277;Dbxref=GeneID:1097710;Name=SCC75A.23;gbkey=Gene;gene=SCC75A.23;gene_biotype=protein_coding;gene_synonym=SCC75A.23;locus_tag=SCO2277
NC_003888.3	RefSeq	CDS	2446970	2447842	.	+	0	ID=cds2240;Parent=gene2277;Dbxref=Genbank:NP_626525.1,GeneID:1097710;Name=NP_626525.1;Note=SCC75A.23%2C possible membrane protein%2C len: 290 aa. Highly similar to many proteins of undefined function including: Escherichia coli SW:YCDN_ECOLI(EMBL:AE000203) YcdN (276 aa)%2C fasta scores opt: 693 z-score: 817.1 E():0 41.6%25 identity in 267 aa overlap and Synechocystis sp. (strain PCC 6803) SW:Y964_SYNY3(EMBL:D90901) (308 aa)%2C fasta scores opt: 363 z-score: 431.0 E(): 1.2e-16 30.4%25 identity in 303 aa overlap;gbkey=CDS;gene=SCC75A.23;product=hypothetical protein;protein_id=NP_626525.1;transl_table=11
NC_003888.3	RefSeq	gene	2447904	2448791	.	+	.	ID=gene2278;Dbxref=GeneID:1097711;Name=SCC75A.24;gbkey=Gene;gene=SCC75A.24;gene_biotype=protein_coding;gene_synonym=SCC75A.24;locus_tag=SCO2278
NC_003888.3	RefSeq	CDS	2447904	2448791	.	+	0	ID=cds2241;Parent=gene2278;Dbxref=Genbank:NP_626526.1,GeneID:1097711;Name=NP_626526.1;Note=SCC75A.24%2C unknown%2C len: 295 aa.;gbkey=CDS;gene=SCC75A.24;product=hypothetical protein;protein_id=NP_626526.1;transl_table=11
NC_003888.3	RefSeq	gene	2448807	2449538	.	-	.	ID=gene2279;Dbxref=GeneID:1097712;Name=SCC75A.25c;gbkey=Gene;gene=SCC75A.25c;gene_biotype=protein_coding;gene_synonym=SCC75A.25c;locus_tag=SCO2279
NC_003888.3	RefSeq	CDS	2448807	2449538	.	-	0	ID=cds2242;Parent=gene2279;Dbxref=Genbank:NP_626527.1,GeneID:1097712;Name=NP_626527.1;Note=SCC75A.25c%2C unknown%2C len: 243 aa.;gbkey=CDS;gene=SCC75A.25c;product=hypothetical protein;protein_id=NP_626527.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2449550	2449553	.	-	.	ID=id2805;gbkey=RBS
NC_003888.3	RefSeq	gene	2449644	2450291	.	-	.	ID=gene2280;Dbxref=GeneID:1097713;Name=SCC75A.26c;gbkey=Gene;gene=SCC75A.26c;gene_biotype=protein_coding;gene_synonym=SCC75A.26c;locus_tag=SCO2280
NC_003888.3	RefSeq	CDS	2449644	2450291	.	-	0	ID=cds2243;Parent=gene2280;Dbxref=Genbank:NP_626528.1,GeneID:1097713;Name=NP_626528.1;Note=SCC75A.26c%2C possible TetR-family transcriptional regulator%2C len: 215 aa. Similar to several other regulators including: Pseudomonas fluorescens TR:AAD31815(EMBL:AF129856) transcriptional regulatory protein PhlF (208 aa)%2C fasta scores opt: 198 z-score: 248.3 E(): 1.9e-06 25.9%25 identity in 158 aa overlap and Streptomyces coelicolor TR:CAB56137(EMBL:AL117669) transcriptional regulator SCF12.11 (206 aa)%2C fasta scores opt: 309 z-score: 381.8 E(): 6.8e-14 30.5%25 identity in 213 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 48..69.;gbkey=CDS;gene=SCC75A.26c;product=TetR family transcriptional regulator;protein_id=NP_626528.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2450061	2450201	.	-	.	ID=id2806;Dbxref=GeneID:1097713;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 35.30%2C E-value 4.5e-08;gbkey=misc_feature;gene=SCC75A.26c
NC_003888.3	RefSeq	gene	2450354	2451040	.	-	.	ID=gene2281;Dbxref=GeneID:1097714;Name=SCC75A.27c;gbkey=Gene;gene=SCC75A.27c;gene_biotype=protein_coding;gene_synonym=SCC75A.27c;locus_tag=SCO2281
NC_003888.3	RefSeq	CDS	2450354	2451040	.	-	0	ID=cds2244;Parent=gene2281;Dbxref=Genbank:NP_626529.1,GeneID:1097714;Name=NP_626529.1;Note=SCC75A.27c%2C possible two-component system response-regulator%2C len: 228 aa. Similar to many other regulators including: Rhodococcus sp TR:O85372(EMBL:AF064700) two-component regulator CprR (212 aa)%2C fasta scores opt: 295 z-score: 351.2 E(): 3.5e-12 31.5%25 identity in 203 aa overlap and Streptomyces coelicolor TR:CAB50960(EMBL:AL096849)  two-component system response regulator SCI11.34 (221 aa)%2C fasta scores opt: 336 z-score: 398.1 E(): 8.4e-15 34.4%25 identity in 224 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family.;gbkey=CDS;gene=SCC75A.27c;product=two-component system response-regulator;protein_id=NP_626529.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2450360	2450575	.	-	.	ID=id2807;Dbxref=GeneID:1097714;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 30.80%2C E-value 7.5e-06;gbkey=misc_feature;gene=SCC75A.27c
NC_003888.3	RefSeq	sequence_feature	2450657	2451016	.	-	.	ID=id2808;Dbxref=GeneID:1097714;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 71.70%2C E-value 1.5e-17;gbkey=misc_feature;gene=SCC75A.27c
NC_003888.3	RefSeq	gene	2451048	2452028	.	-	.	ID=gene2282;Dbxref=GeneID:1097715;Name=SCC75A.28c;gbkey=Gene;gene=SCC75A.28c;gene_biotype=protein_coding;gene_synonym=SCC75A.28c;locus_tag=SCO2282
NC_003888.3	RefSeq	CDS	2451048	2452028	.	-	0	ID=cds2245;Parent=gene2282;Dbxref=Genbank:NP_626530.1,GeneID:1097715;Name=NP_626530.1;Note=SCC75A.28c%2C hypothetical protein%2C len: 326 aa%3B similar to TR:Q984U3 (EMBL:AP003012) Rhizobium loti (Mesorhizobium loti) MLL7840 protein 323 aa%3B fasta scores: opt: 712 Z-score: 794.8 E(): 1.2e-36%3B 38.365%25 identity in 318 aa overlap;gbkey=CDS;gene=SCC75A.28c;product=hypothetical protein;protein_id=NP_626530.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2451053	2451057	.	-	.	ID=id2809;Dbxref=GeneID:1097715;gbkey=RBS;gene=SCC75A.28c
NC_003888.3	RefSeq	gene	2452574	2453629	.	-	.	ID=gene2283;Dbxref=GeneID:1097716;Name=SCC75A.29c;gbkey=Gene;gene=SCC75A.29c;gene_biotype=protein_coding;gene_synonym=SCC75A.29c;locus_tag=SCO2283
NC_003888.3	RefSeq	CDS	2452574	2453629	.	-	0	ID=cds2246;Parent=gene2283;Dbxref=Genbank:NP_626531.1,GeneID:1097716;Name=NP_626531.1;Note=SCC75A.29c%2C possible  esterase%2C len: 351 aa. Similar%2C in parts%2C to several esterases e.g. Pseudomonas sp. TR:Q52467(EMBL:M68491) esterase (389 aa)%2C fasta scores opt: 256 z-score: 289.8 E(): 9.2e-09 30.3%25 identity in 323 aa overlap. Also similar%2C in parts%2C to several penicillin-binding proteins e.g. Nocardia lactamdurans SW:PBP4_NOCLA (EMBL:Z13972) penicillin-binding protein 4 (PBP-4) (381 aa)%2C fasta scores opt: 249 z-score: 282.1 E(): 2.4e-08 29.2%25 identity in 308 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC75A.29c;product=esterase;protein_id=NP_626531.1;transl_table=11
NC_003888.3	RefSeq	gene	2453707	2454993	.	-	.	ID=gene2284;Dbxref=GeneID:1097717;Name=SCC75A.30c;gbkey=Gene;gene=SCC75A.30c;gene_biotype=protein_coding;gene_synonym=SCC75A.30c;locus_tag=SCO2284
NC_003888.3	RefSeq	CDS	2453707	2454993	.	-	0	ID=cds2247;Parent=gene2284;Dbxref=Genbank:NP_626532.1,GeneID:1097717;Name=NP_626532.1;Note=SCC75A.30c%2C possible membrane transport protein%2C len: 428 aa. Similar to many members of the drug resistance translocase family including: Escherichia coli SW:BCR_ECOLI(EMBL:X63703) bicyclomycin resistance protein (sulfonamide resistance protein) (396 aa)%2C fasta scores opt: 767 z-score: 825.5 E():0 33.9%25 identity in 395 aa overlap and Bacillus subtilis TR:P96709(EMBL:AB001488) bicyclomycin resistance protein YdgK (402 aa)%2C fasta scores opt: 1073 z-score: 1151.7 E():0 42.3%25 identity in 397 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and a Prosite hit to PS00216 Sugar transport proteins signature 1. Also contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC75A.30c;product=membrane transport protein;protein_id=NP_626532.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2453725	2454909	.	-	.	ID=id2810;Dbxref=GeneID:1097717;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -91.20%2C E-value 0.0013;gbkey=misc_feature;gene=SCC75A.30c
NC_003888.3	RefSeq	sequence_feature	2454685	2454735	.	-	.	ID=id2811;Dbxref=GeneID:1097717;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCC75A.30c
NC_003888.3	RefSeq	ribosome_entry_site	2455004	2455008	.	-	.	ID=id2812;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2455089	2455092	.	+	.	ID=id2813;gbkey=RBS
NC_003888.3	RefSeq	gene	2455103	2456158	.	+	.	ID=gene2285;Dbxref=GeneID:1097718;Name=SCC75A.31;gbkey=Gene;gene=SCC75A.31;gene_biotype=protein_coding;gene_synonym=SCC75A.31;locus_tag=SCO2285
NC_003888.3	RefSeq	CDS	2455103	2456158	.	+	0	ID=cds2248;Parent=gene2285;Dbxref=Genbank:NP_626533.1,GeneID:1097718;Name=NP_626533.1;Note=SCC75A.31%2C possible oxidoreductase%2C len: 351 aa. Similar to many Eukaryotic dimeric dihydrodiol dehydrogenases e.g. Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) TR:BAA83489(EMBL:AB021932) dimeric dihydrodiol dehydrogenase (EC 1.3.1.20) (334 aa)%2C fasta scores opt: 741 z-score: 868.2 E():0 39.1%25 identity in 335 aa overlap. Also similar to Prokaryotic oxidoreductases e.g. Streptomyces antibioticus TR:AAD55450(EMBL:AF055579) 3-ketoreductase (328 aa)%2C fasta scores opt: 434 z-score: 510.8 E(): 4.5e-21 34.0%25 identity in 300 aa overlap. Contains a Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=SCC75A.31;product=oxidoreductase;protein_id=NP_626533.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2455127	2455837	.	+	.	ID=id2814;Dbxref=GeneID:1097718;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 190.60%2C E-value 2.4e-53;gbkey=misc_feature;gene=SCC75A.31
NC_003888.3	RefSeq	gene	2456145	2457821	.	-	.	ID=gene2286;Dbxref=GeneID:1097719;Name=SCC75A.32c;gbkey=Gene;gene=SCC75A.32c;gene_biotype=protein_coding;gene_synonym=SCC75A.32c;locus_tag=SCO2286
NC_003888.3	RefSeq	CDS	2456145	2457821	.	-	0	ID=cds2249;Parent=gene2286;Dbxref=Genbank:NP_626534.1,GeneID:1097719;Name=NP_626534.1;Note=SCC75A.32c%2C possible alkaline phosphatase%2C len: 558 aa. Highly similar to alkaline phosphatases from Bacillus subtilis SW:PPBD_BACSU (EMBL:U49060) alkaline phosphatase D precursor (EC 3.1.3.1) (556 aa)%2C fasta scores opt: 1652 z-score: 1864.2 E():0 49.6%25 identity in 488 aa overlap. Also similar to several from Streptomyces coelicolor: EMBL:AL096837  alkaline phosphatase SCF43A.18 (553 aa)%2C fasta scores opt: 2452 z-score: 2273.5 E():0 65.0%25 identity in 552 aa overlap and TR:CAB51460 (EMBL:AL096884)  alkaline phosphatase (551 aa)%2C fasta scores opt: 928 z-score: 1047.4 E(): 0 38.5%25 identity in 556 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCC75A.32c;product=alkaline phosphatase;protein_id=NP_626534.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2457827	2457831	.	-	.	ID=id2815;gbkey=RBS
NC_003888.3	RefSeq	gene	2457954	2458745	.	+	.	ID=gene2287;Dbxref=GeneID:1097720;Name=SCC75A.33;gbkey=Gene;gene=SCC75A.33;gene_biotype=protein_coding;gene_synonym=SCC75A.33;locus_tag=SCO2287
NC_003888.3	RefSeq	CDS	2457954	2458745	.	+	0	ID=cds2250;Parent=gene2287;Dbxref=Genbank:NP_626535.1,GeneID:1097720;Name=NP_626535.1;Note=SCC75A.33%2C possible oxidoreductase%2C len: 263 aa. Similar to several including: Bacillus megaterium SW:DHG2_BACME (EMBL:D90044) glucose 1-dehydrogenase II (EC 1.1.1.47) (261 aa)%2C fasta scores opt: 400 z-score: 442.6 E(): 2.8e-17 38.9%25 identity in 193 aa overlap SW:YOHF_ECOLI (EMBL:U00007) hypothetical oxidoreductase (253 aa)%2C fasta scores opt: 422 z-score: 466.5 E(): 1.3e-18 38.3%25 identity in 206 aa overlap. Contains a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature and a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SCC75A.33;product=oxidoreductase;protein_id=NP_626535.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2457999	2458565	.	+	.	ID=id2816;Dbxref=GeneID:1097720;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 208.60%2C E-value 9.8e-59;gbkey=misc_feature;gene=SCC75A.33
NC_003888.3	RefSeq	sequence_feature	2458416	2458502	.	+	.	ID=id2817;Dbxref=GeneID:1097720;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCC75A.33
NC_003888.3	RefSeq	stem_loop	2458942	2458991	.	-	.	ID=id2818;Note=possible stem loop with 100%25 matches over 23 bps and a loop region of 2 bps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2459004	2459330	.	-	.	ID=gene2288;Dbxref=GeneID:1097721;Name=SCC75A.34c;gbkey=Gene;gene=SCC75A.34c;gene_biotype=protein_coding;gene_synonym=SCC75A.34c;locus_tag=SCO2288
NC_003888.3	RefSeq	CDS	2459004	2459330	.	-	0	ID=cds2251;Parent=gene2288;Dbxref=Genbank:NP_626536.1,GeneID:1097721;Name=NP_626536.1;Note=SCC75A.34c%2C unknown%2C len: 108 aa. Similar to Streptomyces coelicolor TR:CAB58302(EMBL:AL121854) hypothetical 11.8 KD protein (106 aa)%2C fasta scores opt:99 z-score: 145.3 E():0.96 31.2%25 identity in 93 aa overlap.;gbkey=CDS;gene=SCC75A.34c;product=hypothetical protein;protein_id=NP_626536.1;transl_table=11
NC_003888.3	RefSeq	gene	2459484	2460026	.	+	.	ID=gene2289;Dbxref=GeneID:1097722;Name=SCC75A.35;gbkey=Gene;gene=SCC75A.35;gene_biotype=protein_coding;gene_synonym=SCC75A.35;locus_tag=SCO2289
NC_003888.3	RefSeq	CDS	2459484	2460026	.	+	0	ID=cds2252;Parent=gene2289;Dbxref=Genbank:NP_626537.1,GeneID:1097722;Name=NP_626537.1;Note=SCC75A.35%2C possible membrane protein%2C len: 180 aa. Similar to several proteins of undefined function including: Bacillus subtilis TR:P96694(EMBL:AB001488) YdfP protein (129 aa)%2C fasta scores opt: 308 z-score: 319.7 E(): 2e-10 42.4%25 identity in 125 aa overlap and Mycobacterium tuberculosis TR:O53252(EMBL:AL021287) (279 aa)%2C fasta scores opt: 328 z-score: 335.2 E(): 2.7e-11 43.5%25 identity in 147 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC75A.35;product=hypothetical protein;protein_id=NP_626537.1;transl_table=11
NC_003888.3	RefSeq	gene	2460057	2460398	.	+	.	ID=gene2290;Dbxref=GeneID:1097723;Name=SCC75A.36;gbkey=Gene;gene=SCC75A.36;gene_biotype=protein_coding;gene_synonym=SCC75A.36;locus_tag=SCO2290
NC_003888.3	RefSeq	CDS	2460057	2460398	.	+	0	ID=cds2253;Parent=gene2290;Dbxref=Genbank:NP_626538.1,GeneID:1097723;Name=NP_626538.1;Note=SCC75A.36%2C unknown%2C len: 113 aa. Weakly similar to Bacillus subtilis SW:YPJD_BACSU(EMBL:L38424) hypothetical 13.0 KD protein (111 aa)%2C fasta scores opt:103 z-score: 145.9 E():0.94 30.8%25 identity in 91 aa overlap.;gbkey=CDS;gene=SCC75A.36;product=hypothetical protein;protein_id=NP_626538.1;transl_table=11
NC_003888.3	RefSeq	gene	2460463	2461470	.	-	.	ID=gene2291;Dbxref=GeneID:1097724;Name=axeA;gbkey=Gene;gene=axeA;gene_biotype=protein_coding;gene_synonym=axeA,SCC75A.37;locus_tag=SCO2291
NC_003888.3	RefSeq	CDS	2460463	2461470	.	-	0	ID=cds2254;Parent=gene2291;Dbxref=Genbank:NP_626539.1,GeneID:1097724;Name=NP_626539.1;Note=SCC75A.37%2C axeA%2C  acetylxylan esterase%2C len: 335 aa. Almost identical in sequence with Streptomyces lividans TR:Q54413 (EMBL:M64552) acetylxylan esterase precursor (EC 3.1.1.72) (335 aa)%2C fasta scores opt: 2197 z-score: 2058.4 E(): 0 98.5%25 identity in 335 aa overlap. Also highly similar to the C-terminus of Cellulomonas fimi SW:XYND_CELFI (EMBL:X76729) endo-1%2C4-beta-xylanase D precursor (EC 3.2.1.8) (644 aa)%2C fasta scores opt: 1108 z-score: 1040.5 E(): 0 50.0%25 identity in 346 aa overlap. Also similar to the adjoining CDS on this cosmid%2C xlnB%2C (335 aa)%2C fasta scores opt: 652 z-score: 554.2 E(): 1.7e-25 56.2%25 identity in 201 aa overlap. Contains a possible N-terminal signal sequence and a Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase;gbkey=CDS;gene=axeA;product=acetylxylan esterase;protein_id=NP_626539.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2460907	2461341	.	-	.	ID=id2819;Dbxref=GeneID:1097724;Note=Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase%2C score 263.80%2C E-value 2.3e-75;gbkey=misc_feature;gene=axeA
NC_003888.3	RefSeq	ribosome_entry_site	2461481	2461486	.	-	.	ID=id2820;gbkey=RBS
NC_003888.3	RefSeq	gene	2461505	2462512	.	-	.	ID=gene2292;Dbxref=GeneID:1097725;Name=xlnB;gbkey=Gene;gene=xlnB;gene_biotype=protein_coding;gene_synonym=xlnB;locus_tag=SCO2292
NC_003888.3	RefSeq	CDS	2461505	2462512	.	-	0	ID=cds2255;Parent=gene2292;Dbxref=Genbank:NP_626540.1,GeneID:1097725;Name=NP_626540.1;Note=SCC75A.38%2C xlnB%2C  endo-1%2C4-beta-xylanase B (xylanase B)%2C len: 335 aa. Almost identical to Streptomyces lividans SW:XYNB_STRLI(EMBL:M64552) endo-1%2C4-beta-xylanase B precursor (xylanase B) (EC 3.2.1.8) (334 aa)%2C fasta scores opt: 2266 z-score: 2249.3 E():0 98.2%25 identity in 335 aa overlap. Also similar to Streptomyces coelicolor TR:CAB52919 (EMBL:AL109949) endo-1%2C4-beta-xylanase%2C XlnC (241 aa)%2C fasta scores opt: 1087 z-score: 970.6 E():0 71.9%25 identity in 224 aa overlap and to the adjoining CDS on this cosmid%2C AxeA%2C (335 aa)%2C fasta scores opt: 652 z-score: 585.8 E(): 2.9e-27 56.2%25 identity in 201 aa overlap. Contains a N-terminal signal sequence%2C Prosite hits to PS00776 Glycosyl hydrolases family 11 active site signature 1 and PS00777 Glycosyl hydrolases family 11 active site signature 2%2C as well as a Pfam match to entry PF00457 Glyco_hydro_11%2C Glycosyl hydrolases family 11.;gbkey=CDS;gene=xlnB;product=endo-1%2C4-beta-xylanase B;protein_id=NP_626540.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2461823	2462362	.	-	.	ID=id2821;Dbxref=GeneID:1097725;Note=Pfam match to entry PF00457 Glyco_hydro_11%2C Glycosyl hydrolases family 11%2C score 418.40%2C E-value 6.7e-122;gbkey=misc_feature;gene=xlnB
NC_003888.3	RefSeq	sequence_feature	2461835	2461870	.	-	.	ID=id2822;Dbxref=GeneID:1097725;Note=PS00777 Glycosyl hydrolases family 11 active site signature 2;gbkey=misc_feature;gene=xlnB
NC_003888.3	RefSeq	sequence_feature	2462108	2462140	.	-	.	ID=id2823;Dbxref=GeneID:1097725;Note=PS00776 Glycosyl hydrolases family 11 active site signature 1;gbkey=misc_feature;gene=xlnB
NC_003888.3	RefSeq	ribosome_entry_site	2462526	2462530	.	-	.	ID=id2824;gbkey=RBS
NC_003888.3	RefSeq	gene	2462887	2463312	.	-	.	ID=gene2293;Dbxref=GeneID:1097726;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=misc_RNA;locus_tag=SCOs01
NC_003888.3	RefSeq	transcript	2462887	2463312	.	-	.	ID=rna15;Parent=gene2293;Dbxref=GeneID:1097726;Note=probable ribonuclease P RNA%2C (rnpB) (positions taken from Streptomyces lividans EMBL:SLXLNB);gbkey=misc_RNA;gene=rnpB;product=ribonuclease P RNA
NC_003888.3	RefSeq	exon	2462887	2463312	.	-	.	ID=id2825;Parent=rna15;Dbxref=GeneID:1097726;Note=probable ribonuclease P RNA%2C (rnpB) (positions taken from Streptomyces lividans EMBL:SLXLNB);gbkey=misc_RNA;gene=rnpB;product=ribonuclease P RNA
NC_003888.3	RefSeq	gene	2463222	2464202	.	-	.	ID=gene2294;Dbxref=GeneID:1097727;Name=SCC30.01c;gbkey=Gene;gene=SCC30.01c;gene_biotype=protein_coding;gene_synonym=SCC30.01c;locus_tag=SCO2293
NC_003888.3	RefSeq	CDS	2463222	2464202	.	-	0	ID=cds2256;Parent=gene2294;Dbxref=Genbank:NP_626541.1,GeneID:1097727;Name=NP_626541.1;Note=SCC30.01c%2C possible integral membrane protein%2C len: 326 aa%3B similar to TR:BAA87714 (EMBL:AB016260) Agrobacterium tumefaciens TIORF89 protein%2C 306 aa%3B fasta scores: opt: 396 z-score: 465.4 E(): 1.8e-18%3B 28.7%25 identity in 286 aa overlap. Contains 2x Pfam match to entry PF00892 DUF6%2C Integral membrane protein and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC30.01c;product=hypothetical protein;protein_id=NP_626541.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2463324	2463731	.	-	.	ID=id2826;Dbxref=GeneID:1097727;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 51.40%2C E-value 1.9e-11;gbkey=misc_feature;gene=SCC30.01c
NC_003888.3	RefSeq	sequence_feature	2463753	2464163	.	-	.	ID=id2827;Dbxref=GeneID:1097727;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 38.50%2C E-value 1.6e-07;gbkey=misc_feature;gene=SCC30.01c
NC_003888.3	RefSeq	gene	2464222	2465058	.	-	.	ID=gene2295;Dbxref=GeneID:1097728;Name=SCC30.02c;gbkey=Gene;gene=SCC30.02c;gene_biotype=protein_coding;gene_synonym=SCC30.02c;locus_tag=SCO2294
NC_003888.3	RefSeq	CDS	2464222	2465058	.	-	0	ID=cds2257;Parent=gene2295;Dbxref=Genbank:NP_626542.1,GeneID:1097728;Name=NP_626542.1;Note=SCC30.02c%2C probable araC-family regulatory protein%2C len: 278 aa%3B similar to SW:ARAC_SALTY (EMBL:J01797) Salmonella typhimurium arabinose operon regulatory protein AraC%2C 281 aa%3B fasta scores: opt: 232 z-score: 270.4 E(): 1.3e-07%3B 26.7%25 identity in 270 aa overlap and to various Streptomyces coelicolor araC-family transcriptional regulators%2C e.g. TR:O50480 (EMBL:AL031031) S. coelicolor transcriptional regulator SC7C7.17 (SC4H8.01)%2C 288 aa%3B fasta scores: opt: 638 z-score: 605.1 E(): 3.3e-28%3B 43.8%25 identity in 292 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and possible helix-turn-helix motif at residues 189..210 (+3.81 SD);gbkey=CDS;gene=SCC30.02c;product=AraC family transcription regulator;protein_id=NP_626542.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2464240	2464497	.	-	.	ID=id2828;Dbxref=GeneID:1097728;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 59.80%2C E-value 5.8e-14;gbkey=misc_feature;gene=SCC30.02c
NC_003888.3	RefSeq	gene	2465169	2465930	.	+	.	ID=gene2296;Dbxref=GeneID:1097729;Name=SCC30.03;gbkey=Gene;gene=SCC30.03;gene_biotype=protein_coding;gene_synonym=SCC30.03;locus_tag=SCO2295
NC_003888.3	RefSeq	CDS	2465169	2465930	.	+	0	ID=cds2258;Parent=gene2296;Dbxref=Genbank:NP_626543.1,GeneID:1097729;Name=NP_626543.1;Note=SCC30.03%2C hypothetical protein%2C len: 253 aa%3B N-terminal region similar to TR:CAB52842 (EMBL:AL109848) Streptomyces coelicolor transcriptional regulator SCI51.18%2C 548 aa%3B fasta scores: opt: 114 z-score: 134.1 E(): 5%3B 30.6%25 identity in 196 aa overlap. Contains possible coiled-coil region at aprox residues 76..93;gbkey=CDS;gene=SCC30.03;product=hypothetical protein;protein_id=NP_626543.1;transl_table=11
NC_003888.3	RefSeq	gene	2465927	2466541	.	+	.	ID=gene2297;Dbxref=GeneID:1097730;Name=SCC30.04;gbkey=Gene;gene=SCC30.04;gene_biotype=protein_coding;gene_synonym=SCC30.04;locus_tag=SCO2296
NC_003888.3	RefSeq	CDS	2465927	2466541	.	+	0	ID=cds2259;Parent=gene2297;Dbxref=Genbank:NP_626544.1,GeneID:1097730;Name=NP_626544.1;Note=SCC30.04%2C possible integral membrane protein%2C len: 204 aa%3B similar to TR:AAF12504 (EMBL:AE001863) Deinococcus radiodurans hypothetical 32.0 kD protein%2C 289 aa%3B fasta scores: opt: 178 z-score: 231.0 E(): 2e-05%3B 29.8%25 identity in 161 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC30.04;product=hypothetical protein;protein_id=NP_626544.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2466571	2466575	.	+	.	ID=id2829;gbkey=RBS
NC_003888.3	RefSeq	gene	2466581	2467363	.	+	.	ID=gene2298;Dbxref=GeneID:1097731;Name=SCC30.05;gbkey=Gene;gene=SCC30.05;gene_biotype=protein_coding;gene_synonym=SCC30.05;locus_tag=SCO2297
NC_003888.3	RefSeq	CDS	2466581	2467363	.	+	0	ID=cds2260;Parent=gene2298;Dbxref=Genbank:NP_626545.1,GeneID:1097731;Name=NP_626545.1;Note=SCC30.05%2C hypothetical protein%2C len: 260 aa%3B similar to SW:YHI3_CAMJE (EMBL:Z36940) Campylobacter jejuni hypothetical 28.7 kD protein in HipO 3'region%2C 246 aa%3B fasta scores: opt: 245 z-score: 295.9 E(): 4.9e-09%3B 28.1%25 identity in 210 aa overlap;gbkey=CDS;gene=SCC30.05;product=hypothetical protein;protein_id=NP_626545.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2467431	2467435	.	+	.	ID=id2830;gbkey=RBS
NC_003888.3	RefSeq	gene	2467437	2468096	.	+	.	ID=gene2299;Dbxref=GeneID:1097732;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=kdgA,SCC30.06;locus_tag=SCO2298
NC_003888.3	RefSeq	CDS	2467437	2468096	.	+	0	ID=cds2261;Parent=gene2299;Dbxref=Genbank:NP_626546.1,GeneID:1097732;Name=NP_626546.1;Note=SCC30.06%2C kdgA%2C KHG/KDPG aldolase%2C len: 219 aa%3B highly similar to SW:ALKH_ECOLI (EMBL:X68871) Escherichia coli KHG/KDPG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) (2-keto-4-hydroxyglutarate aldolase) (KHG-aldolase)%3B 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) (phospho-2-dehydro-3-deoxygluconate aldolase) (phospho-2-keto-3-deoxygluconate aldolase) (2-keto-3-deoxy-6-phosphogluconate aldolase) (KDPG-aldolase)] KdgA%2C 213 aa%3B fasta scores: opt: 757 z-score: 811.9 E(): 0%3B 55.0%25 identity in 202 aa overlap. Contains Pfam match to entry PF01081 Aldolase%2C KDPG and KHG aldolase and matches to Prosite entries PS00159 KDPG and KHG aldolases active site and PS00160 KDPG and KHG aldolases Schiff-base forming residue;gbkey=CDS;gene=kdgA;product=KHG/KDPG aldolase;protein_id=NP_626546.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2467464	2468051	.	+	.	ID=id2831;Dbxref=GeneID:1097732;Note=Pfam match to entry PF01081 Aldolase%2C KDPG and KHG aldolase%2C score 325.50%2C E-value 6.2e-94;gbkey=misc_feature;gene=kdgA
NC_003888.3	RefSeq	sequence_feature	2467560	2467589	.	+	.	ID=id2832;Dbxref=GeneID:1097732;Note=PS00159 KDPG and KHG aldolases active site;gbkey=misc_feature;gene=kdgA
NC_003888.3	RefSeq	sequence_feature	2467824	2467865	.	+	.	ID=id2833;Dbxref=GeneID:1097732;Note=PS00160 KDPG and KHG aldolases Schiff-base forming residue;gbkey=misc_feature;gene=kdgA
NC_003888.3	RefSeq	gene	2468071	2469564	.	-	.	ID=gene2300;Dbxref=GeneID:1097733;Name=SCC30.07c;gbkey=Gene;gene=SCC30.07c;gene_biotype=protein_coding;gene_synonym=SCC30.07c;locus_tag=SCO2299
NC_003888.3	RefSeq	CDS	2468071	2469564	.	-	0	ID=cds2262;Parent=gene2300;Dbxref=Genbank:NP_626547.1,GeneID:1097733;Name=NP_626547.1;Note=SCC30.07c%2C possible bifunctional protein (ribonuclease H/phosphoglycerate mutase)%2C len: 497 aa%3B N-terminal region similar to TR:Q9X7R6 (EMBL:AL049863) Streptomyces coelicolor ribonuclease H SC5H1.08c%2C 235 aa%3B blastp scores: Score %3D 185 (65.1 bits)%2C Expect %3D 9.5e-14%2C P %3D 9.5e-14 Identities %3D 82/230 (35%25)%2C Positives %3D 105/230 (45%25) and C-terminal region similar to TR:O67797 (EMBL:AE000766) Aquifex aeolicus phosphoglycerate mutase PgmA%2C 212 aa%3B fasta scores: opt: 355 z-score: 327.3 E(): 8.7e-11%3B 32.8%25 identity in 201 aa overlap. Contains Pfam match to entry PF00075 rnaseH%2C RNase H and PF00300 PGAM%2C Phosphoglycerate mutase family;gbkey=CDS;gene=SCC30.07c;product=bifunctional RNase H/acid phosphatase;protein_id=NP_626547.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2468230	2468676	.	-	.	ID=id2834;Dbxref=GeneID:1097733;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 56.50%2C E-value 5.2e-14;gbkey=misc_feature;gene=SCC30.07c
NC_003888.3	RefSeq	repeat_region	2468792	2468812	.	-	.	ID=id2835;Dbxref=GeneID:1097733;Note=partial repeat taccggcgcatccgccaccgg - TGASATG;gbkey=repeat_region;gene=SCC30.07c
NC_003888.3	RefSeq	repeat_region	2468813	2468842	.	-	.	ID=id2836;Dbxref=GeneID:1097733;Note=repeat unit taccggcgcatccgccaccggcacttccgg - TGASATGTSG;gbkey=repeat_region;gene=SCC30.07c
NC_003888.3	RefSeq	repeat_region	2468843	2468872	.	-	.	ID=id2837;Dbxref=GeneID:1097733;Note=repeat unit - taccggcgcatccgccaccggcacttccgg - TGASATGTSG;gbkey=repeat_region;gene=SCC30.07c
NC_003888.3	RefSeq	sequence_feature	2469121	2469543	.	-	.	ID=id2838;Dbxref=GeneID:1097733;Note=Pfam match to entry PF00075 rnaseH%2C RNase H%2C score -14.00%2C E-value 0.0031;gbkey=misc_feature;gene=SCC30.07c
NC_003888.3	RefSeq	gene	2469576	2470166	.	-	.	ID=gene2301;Dbxref=GeneID:1097734;Name=SCC30.08c;gbkey=Gene;gene=SCC30.08c;gene_biotype=protein_coding;gene_synonym=SCC30.08c;locus_tag=SCO2300
NC_003888.3	RefSeq	CDS	2469576	2470166	.	-	0	ID=cds2263;Parent=gene2301;Dbxref=Genbank:NP_626548.1,GeneID:1097734;Name=NP_626548.1;Note=SCC30.08c%2C hypothetical protein%2C len: 196 aa%3B similar to SW:Y01A_MYCTU (EMBL:Z70692) Mycobacterium tuberculosis hypothetical 26.9 kD protein MTCY427.10c%2C 245 aa%3B fasta scores: opt: 375 z-score: 404.1 E(): 4.6e-15%3B 37.5%25 identity in 176 aa overlap. Contains possible colied-coil region at aprox residues 56..112;gbkey=CDS;gene=SCC30.08c;product=hypothetical protein;protein_id=NP_626548.1;transl_table=11
NC_003888.3	RefSeq	gene	2470316	2471173	.	-	.	ID=gene2302;Dbxref=GeneID:1097735;Name=SCC30.09c;gbkey=Gene;gene=SCC30.09c;gene_biotype=protein_coding;gene_synonym=SCC30.09c;locus_tag=SCO2301
NC_003888.3	RefSeq	CDS	2470316	2471173	.	-	0	ID=cds2264;Parent=gene2302;Dbxref=Genbank:NP_626549.1,GeneID:1097735;Name=NP_626549.1;Note=SCC30.09c%2C hypothetical protein%2C len: 285 aa%3B similar to TR:O69481 (EMBL:AL023635) Mycobacterium leprae hypothetical 40.3 kD protein MLCB1243.36%2C 385 aa%3B fasta scores: opt: 414 z-score: 484.0 E(): 1.7e-19%3B 34.9%25 identity in 370 aa overlap. Contains Pfam match to entry PF01784 DUF34%2C Domain of unknown function;gbkey=CDS;gene=SCC30.09c;product=hypothetical protein;protein_id=NP_626549.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2470406	2471143	.	-	.	ID=id2839;Dbxref=GeneID:1097735;Note=Pfam match to entry PF01784 DUF34%2C Domain of unknown function%2C score 163.30%2C E-value 4.2e-45;gbkey=misc_feature;gene=SCC30.09c
NC_003888.3	RefSeq	ribosome_entry_site	2471367	2471371	.	+	.	ID=id2840;gbkey=RBS
NC_003888.3	RefSeq	gene	2471382	2472650	.	+	.	ID=gene2303;Dbxref=GeneID:1097736;Name=SCC30.10;gbkey=Gene;gene=SCC30.10;gene_biotype=protein_coding;gene_synonym=SCC30.10;locus_tag=SCO2302
NC_003888.3	RefSeq	CDS	2471382	2472650	.	+	0	ID=cds2265;Parent=gene2303;Dbxref=Genbank:NP_626550.1,GeneID:1097736;Name=NP_626550.1;Note=SCC30.10%2C unknown%2C len: 422 aa. High content in glycine%2C alanine and proline amino acid residues;gbkey=CDS;gene=SCC30.10;product=hypothetical protein;protein_id=NP_626550.1;transl_table=11
NC_003888.3	RefSeq	gene	2472748	2472915	.	+	.	ID=gene2304;Dbxref=GeneID:1097737;Name=SCC30.11;gbkey=Gene;gene=SCC30.11;gene_biotype=protein_coding;gene_synonym=SCC30.11;locus_tag=SCO2303
NC_003888.3	RefSeq	CDS	2472748	2472915	.	+	0	ID=cds2266;Parent=gene2304;Dbxref=Genbank:NP_626551.1,GeneID:1097737;Name=NP_626551.1;Note=SCC30.11%2C unknown%2C len: 55 aa;gbkey=CDS;gene=SCC30.11;product=hypothetical protein;protein_id=NP_626551.1;transl_table=11
NC_003888.3	RefSeq	gene	2473023	2474024	.	-	.	ID=gene2305;Dbxref=GeneID:1097738;Name=SCC30.12c;gbkey=Gene;gene=SCC30.12c;gene_biotype=protein_coding;gene_synonym=SCC30.12c;locus_tag=SCO2304
NC_003888.3	RefSeq	CDS	2473023	2474024	.	-	0	ID=cds2267;Parent=gene2305;Dbxref=Genbank:NP_626552.1,GeneID:1097738;Name=NP_626552.1;Note=SCC30.12c%2C possible dehydrogenase%2C len: 333 aa%3B similar to SW:DHB4_HUMAN (EMBL:X87176) Homo sapiens%2C estradiol 17 beta-dehydrogenase 4 (EC 1.1.1.62) Hsd17b4%2C 736 aa%3B fasta scores: opt: 611 z-score: 633.2 E(): 8e-28%3B 34.7%25 identity in 288 aa overlap. Contains Pfam match to entry PF01575 MaoC_like%2C MaoC like domain;gbkey=CDS;gene=SCC30.12c;product=dehydrogenase;protein_id=NP_626552.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2473071	2473445	.	-	.	ID=id2841;Dbxref=GeneID:1097738;Note=Pfam match to entry PF01575 MaoC_like%2C MaoC like domain%2C score 141.60%2C E-value 1.4e-38;gbkey=misc_feature;gene=SCC30.12c
NC_003888.3	RefSeq	gene	2474063	2474989	.	+	.	ID=gene2306;Dbxref=GeneID:1097739;Name=SCC30.13;gbkey=Gene;gene=SCC30.13;gene_biotype=protein_coding;gene_synonym=SCC30.13;locus_tag=SCO2305
NC_003888.3	RefSeq	CDS	2474063	2474989	.	+	0	ID=cds2268;Parent=gene2306;Dbxref=Genbank:NP_626553.1,GeneID:1097739;Name=NP_626553.1;Note=SCC30.13%2C probable ABC transporter ATP-binding subunit%2C len: 308 aa%3B similar to TR:AAF12291 (EMBL:AE001862) Deinococcus radiodurans ABC transporter%2C ATP-binding protein%2C %2C DRA0007%2C 301 aa%3B fasta scores: opt: 753 z-score: 842.3 E(): 0%3B 47.9%25 identity in 288 aa overlap and to SW:NODI_RHILO (EMBL:X55705) Rhizobium loti nodulation ATP-binding protein I%2C NodI%2C 339 aa%3B fasta scores: opt: 576 z-score: 645.7 E(): 1.6e-28%3B 37.3%25 identity in 303 aa overlap. Also similar to various Streptomyces coelicolor ABC transporter ATP-binding proteins%2C e.g. TR:CAB56355 (EMBL:AL118514) S. coelicolor ABC transporter%2C ATP-binding subunit SCD25.11c%2C 326 aa%3B fasta scores: opt: 606 z-score: 418.1 E(): 8.6e-18%3B 41.6%25 identity in 296 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCC30.13;product=ABC transporter ATP-binding protein;protein_id=NP_626553.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2474168	2474692	.	+	.	ID=id2842;Dbxref=GeneID:1097739;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 179.00%2C E-value 7.6e-50;gbkey=misc_feature;gene=SCC30.13
NC_003888.3	RefSeq	sequence_feature	2474189	2474212	.	+	.	ID=id2843;Dbxref=GeneID:1097739;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC30.13
NC_003888.3	RefSeq	ribosome_entry_site	2474974	2474979	.	+	.	ID=id2844;Dbxref=GeneID:1097739;gbkey=RBS;gene=SCC30.13
NC_003888.3	RefSeq	gene	2474986	2475702	.	+	.	ID=gene2307;Dbxref=GeneID:1097740;Name=SCC30.14;gbkey=Gene;gene=SCC30.14;gene_biotype=protein_coding;gene_synonym=SCC30.14;locus_tag=SCO2306
NC_003888.3	RefSeq	CDS	2474986	2475702	.	+	0	ID=cds2269;Parent=gene2307;Dbxref=Genbank:NP_626554.1,GeneID:1097740;Name=NP_626554.1;Note=SCC30.14%2C probable ABC transporter integral membrane protein%2C len: 238 aa%3B similar to TR:Q9XAC7 (EMBL:AL096839) Streptomyces coelicolor integral membrane transport protein SCC22.11%2C 269 aa%3B fasta scores: opt: 219 z-score: 253.7 E(): 1.1e-06%3B 30.1%25 identity in 239 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC30.14;product=ABC transporter;protein_id=NP_626554.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2475727	2475730	.	+	.	ID=id2845;gbkey=RBS
NC_003888.3	RefSeq	gene	2475740	2476969	.	+	.	ID=gene2308;Dbxref=GeneID:1097741;Name=SCC30.15;gbkey=Gene;gene=SCC30.15;gene_biotype=protein_coding;gene_synonym=SCC30.15;locus_tag=SCO2307
NC_003888.3	RefSeq	CDS	2475740	2476969	.	+	0	ID=cds2270;Parent=gene2308;Dbxref=Genbank:NP_626555.1,GeneID:1097741;Name=NP_626555.1;Note=SCC30.15%2C possible two-component sensor kinase%2C len: 409 aa%3B similar to TR:Q9ZA46 (EMBL:AJ011500) Streptomyces violaceoruber  two-component sensor kinase GRA-ORF11%2C 406 aa%3B fasta scores: opt: 460 z-score: 493.4 E(): 4.9e-20%3B 33.3%25 identity in 402 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC30.15;product=two-component sensor kinase;protein_id=NP_626555.1;transl_table=11
NC_003888.3	RefSeq	gene	2477055	2477687	.	+	.	ID=gene2309;Dbxref=GeneID:1097742;Name=SCC30.16;gbkey=Gene;gene=SCC30.16;gene_biotype=protein_coding;gene_synonym=SCC30.16;locus_tag=SCO2308
NC_003888.3	RefSeq	CDS	2477055	2477687	.	+	0	ID=cds2271;Parent=gene2309;Dbxref=Genbank:NP_626556.1,GeneID:1097742;Name=NP_626556.1;Note=SCC30.16%2C probable two-component system response regulator%2C len: 235 aa%3B similar to TR:Q9ZA47 (EMBL:AJ011500) Streptomyces violaceoruber two-component response regulator GRA-ORF10%2C 202 aa%3B fasta scores: opt: 711 z-score: 821.6 E(): 0%3B 55.0%25 identity in 200 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Contains also possible helix-turn-helix motif at residues 190..211 (+4.76 SD);gbkey=CDS;gene=SCC30.16;product=two-component system response regulator;protein_id=NP_626556.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2477085	2477426	.	+	.	ID=id2846;Dbxref=GeneID:1097742;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 108.80%2C E-value 1.1e-28;gbkey=misc_feature;gene=SCC30.16
NC_003888.3	RefSeq	sequence_feature	2477493	2477684	.	+	.	ID=id2847;Dbxref=GeneID:1097742;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 54.50%2C E-value 2.4e-12;gbkey=misc_feature;gene=SCC30.16
NC_003888.3	RefSeq	sequence_feature	2477544	2477627	.	+	.	ID=id2848;Dbxref=GeneID:1097742;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCC30.16
NC_003888.3	RefSeq	repeat_region	2477735	2477756	.	+	.	ID=id2849;Note=conserved repeat unit: GTCGGCCACCGGCCGGTGGGGG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	2477848	2477869	.	+	.	ID=id2850;Note=conserved repeat unit: GTCGGCCACCGGCCGGTGGGGG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	2477961	2477982	.	+	.	ID=id2851;Note=conserved repeat unit: GTCGGCCACCGGCCGGTGGGGG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	2478074	2478095	.	+	.	ID=id2852;Note=conserved repeat unit: GTCGGCCACCGGCCGGTGGGGG;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2478172	2479641	.	-	.	ID=gene2310;Dbxref=GeneID:1097743;Name=SCC30.17c;gbkey=Gene;gene=SCC30.17c;gene_biotype=protein_coding;gene_synonym=SCC30.17c;locus_tag=SCO2309
NC_003888.3	RefSeq	CDS	2478172	2479641	.	-	0	ID=cds2272;Parent=gene2310;Dbxref=Genbank:NP_626557.1,GeneID:1097743;Name=NP_626557.1;Note=SCC30.17c%2C probable transmembrane transport protein%2C len: 489 aa%3B similar to TR:Q9WVV3 (EMBL:AF127374) Streptomyces lavendulae Mtc%2C 484 aa%3B fasta scores: opt: 1680 z-score: 1711.3 E(): 0%3B 54.7%25 identity in 475 aa overlap and to SW:CMCT_NOCLA (EMBL:Z13973) Nocardia lactamdurans cephamycin export protein CmcT%2C 486 aa%3B fasta scores: opt: 1334 z-score: 1360.2 E(): 0%3B 48.3%25 identity in 480 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC30.17c;product=transmembrane transport protein;protein_id=NP_626557.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2479903	2479907	.	+	.	ID=id2853;gbkey=RBS
NC_003888.3	RefSeq	gene	2479917	2481674	.	+	.	ID=gene2311;Dbxref=GeneID:1097744;Name=SCC30.18;gbkey=Gene;gene=SCC30.18;gene_biotype=protein_coding;gene_synonym=SCC30.18,SCC53.01;locus_tag=SCO2310
NC_003888.3	RefSeq	CDS	2479917	2481674	.	+	0	ID=cds2273;Parent=gene2311;Dbxref=Genbank:NP_733567.1,GeneID:1097744;Name=NP_733567.1;Note=SCC53.01%2C possible integral membrane efflux protein%2C partial CDS%2C len: 277aa%3B similar to C-terminus of many eg. TR:Q9ZBJ1 (EMBL:AL035161) efflux protein from Streptomyces coelicolor (815 aa) fasta scores%3B opt: 249%2C z-score: 264.8%2C E(): 2.8e-07%2C 29.9%25 identity in 314 aa overlap and SW:P39886 (TCMA_STRGA) tetracenomycin c resistance and export protein from Streptomyces glaucescens (538 aa) fasta scores%3B opt: 197%2C z-score: 213.0%2C E(): 0.00022%2C 30.1%25 identity in 176 aa overlap. Contains possible membrane-spanning hydrophobic regions.~SCC30.18%2C probable transport protein (fragment)%2C len: >348 aa%3B similar to SW:TCMA_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA%2C 538 aa%3B fasta scores: opt: 447 z-score: 504.9 E(): 1.1e-20%3B 27.7%25 identity in 361 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC30.18;product=integral membrane efflux protein;protein_id=NP_733567.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2481907	2481911	.	+	.	ID=id2854;gbkey=RBS
NC_003888.3	RefSeq	gene	2481918	2483546	.	+	.	ID=gene2312;Dbxref=GeneID:1097745;Name=SCC53.02;gbkey=Gene;gene=SCC53.02;gene_biotype=protein_coding;gene_synonym=SCC53.02;locus_tag=SCO2311
NC_003888.3	RefSeq	CDS	2481918	2483546	.	+	0	ID=cds2274;Parent=gene2312;Dbxref=Genbank:NP_626558.1,GeneID:1097745;Name=NP_626558.1;Note=SCC53.02%2C unknown%2C len: 542aa%3B contains possible stem loop in the 3' end of the CDS.;gbkey=CDS;gene=SCC53.02;product=hypothetical protein;protein_id=NP_626558.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	2483501	2483541	.	+	.	ID=id2855;Dbxref=GeneID:1097745;Note=Stem loop within CDS SCC53.02. Score 50: 18/19 ( 94%25) matches%2C 0 gaps%2C 3 base loop.;gbkey=stem_loop;gene=SCC53.02
NC_003888.3	RefSeq	gene	2483562	2484278	.	+	.	ID=gene2313;Dbxref=GeneID:1097746;Name=SCC53.03;gbkey=Gene;gene=SCC53.03;gene_biotype=protein_coding;gene_synonym=SCC53.03;locus_tag=SCO2312
NC_003888.3	RefSeq	CDS	2483562	2484278	.	+	0	ID=cds2275;Parent=gene2313;Dbxref=Genbank:NP_626559.1,GeneID:1097746;Name=NP_626559.1;Note=SCC53.03%2C hypothetical protein%2C len: 238 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC53.03;product=hypothetical protein;protein_id=NP_626559.1;transl_table=11
NC_003888.3	RefSeq	gene	2484289	2485299	.	+	.	ID=gene2314;Dbxref=GeneID:1097747;Name=SCC53.04;gbkey=Gene;gene=SCC53.04;gene_biotype=protein_coding;gene_synonym=SCC53.04;locus_tag=SCO2313
NC_003888.3	RefSeq	CDS	2484289	2485299	.	+	0	ID=cds2276;Parent=gene2314;Dbxref=Genbank:NP_626560.1,GeneID:1097747;Name=NP_626560.1;Note=SCC53.04%2C possible membrane protein%2C len: 336aa%3B similar to TR:O69684 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (241 aa) fasta scores%3B opt: 536%2C z-score: 436.5%2C E(): 7.6e-17%2C 41.2%25 identity in 233 aa overlap. Contains Pfam match to entry PF01520 Amidase_3%2C N-acetylmuramoyl-L-alanine amidase and possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCC53.04;product=hypothetical protein;protein_id=NP_626560.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2484895	2485293	.	+	.	ID=id2856;Dbxref=GeneID:1097747;Note=Pfam match to entry PF01520 Amidase_3%2C N-acetylmuramoyl-L-alanine amidase%2C score 13.80%2C E-value 5e-05;gbkey=misc_feature;gene=SCC53.04
NC_003888.3	RefSeq	ribosome_entry_site	2485447	2485451	.	+	.	ID=id2857;gbkey=RBS
NC_003888.3	RefSeq	gene	2485458	2486327	.	+	.	ID=gene2315;Dbxref=GeneID:1097748;Name=SCC53.05;gbkey=Gene;gene=SCC53.05;gene_biotype=protein_coding;gene_synonym=SCC53.05;locus_tag=SCO2314
NC_003888.3	RefSeq	CDS	2485458	2486327	.	+	0	ID=cds2277;Parent=gene2315;Dbxref=Genbank:NP_626561.1,GeneID:1097748;Name=NP_626561.1;Note=SCC53.05%2C possible integral membrane protein%2C len: 289 aa%3B contains possible membrane-spanning hydrophobic regions. Also contains Gly/Pro/Gln-rich region 160-220aa.;gbkey=CDS;gene=SCC53.05;product=hypothetical protein;protein_id=NP_626561.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2486418	2486423	.	+	.	ID=id2858;gbkey=RBS
NC_003888.3	RefSeq	gene	2486429	2486722	.	+	.	ID=gene2316;Dbxref=GeneID:1097749;Name=SCC53.06;gbkey=Gene;gene=SCC53.06;gene_biotype=protein_coding;gene_synonym=SCC53.06;locus_tag=SCO2315
NC_003888.3	RefSeq	CDS	2486429	2486722	.	+	0	ID=cds2278;Parent=gene2316;Dbxref=Genbank:NP_626562.1,GeneID:1097749;Name=NP_626562.1;Note=SCC53.06%2C possible membrane protein%2C len: 97aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC53.06;product=hypothetical protein;protein_id=NP_626562.1;transl_table=11
NC_003888.3	RefSeq	gene	2486736	2487833	.	-	.	ID=gene2317;Dbxref=GeneID:1097750;Name=SCC53.07c;gbkey=Gene;gene=SCC53.07c;gene_biotype=protein_coding;gene_synonym=SCC53.07c;locus_tag=SCO2316
NC_003888.3	RefSeq	CDS	2486736	2487833	.	-	0	ID=cds2279;Parent=gene2317;Dbxref=Genbank:NP_626563.1,GeneID:1097750;Name=NP_626563.1;Note=SCC53.07c%2C unknown%2C len: 365aa;gbkey=CDS;gene=SCC53.07c;product=hypothetical protein;protein_id=NP_626563.1;transl_table=11
NC_003888.3	RefSeq	gene	2487830	2488564	.	-	.	ID=gene2318;Dbxref=GeneID:1097751;Name=SCC53.08c;gbkey=Gene;gene=SCC53.08c;gene_biotype=protein_coding;gene_synonym=SCC53.08c;locus_tag=SCO2317
NC_003888.3	RefSeq	CDS	2487830	2488564	.	-	0	ID=cds2280;Parent=gene2318;Dbxref=Genbank:NP_626564.1,GeneID:1097751;Name=NP_626564.1;Note=SCC53.08c%2C possible methyltransferase%2C len: 244 aa%3B region similar to many methyltransferases e.g. TR:O82720 (EMBL:U81312) S-adenosyl-methionine-sterol-C-methyltransferase from Nicotiana tabacum (Common tobacco) (346 aa) fasta scores%3B opt: 228%2C z-score: 285.6%2C E(): 1.9e-08%2C 33.1%25 identity in 139 aa overlap.;gbkey=CDS;gene=SCC53.08c;product=methyltransferase;protein_id=NP_626564.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2487838	2487842	.	-	.	ID=id2859;Dbxref=GeneID:1097751;gbkey=RBS;gene=SCC53.08c
NC_003888.3	RefSeq	gene	2488558	2490054	.	-	.	ID=gene2319;Dbxref=GeneID:1097752;Name=SCC53.09c;gbkey=Gene;gene=SCC53.09c;gene_biotype=protein_coding;gene_synonym=SCC53.09c;locus_tag=SCO2318
NC_003888.3	RefSeq	CDS	2488558	2490054	.	-	0	ID=cds2281;Parent=gene2319;Dbxref=Genbank:NP_626565.1,GeneID:1097752;Name=NP_626565.1;Note=SCC53.09c%2C possible glycosyl transferase%2C len: 498 aa%3B similar to many e.g. TR:Q00481 (EMBL:X61917) second mannosyl transferase from Salmonella enterica (336 aa) fasta scores%3B opt: 325%2C z-score: 324.2%2C E(): 1.4e-10%2C 30.9%25 identity in 259 aa overlap and TR:Q9Z5B7 (EMBL:AL035478) transferase from Streptomyces coelicolor (406 aa) fasta scores%3B opt: 398%2C z-score: 393.8 %2CE(): 1.8e-14%2C 32.4%25 identity in 454 aa overlap. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1.;gbkey=CDS;gene=SCC53.09c;product=glycosyl transferase;protein_id=NP_626565.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2488822	2489337	.	-	.	ID=id2860;Dbxref=GeneID:1097752;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 117.10%2C E-value 2.2e-31;gbkey=misc_feature;gene=SCC53.09c
NC_003888.3	RefSeq	ribosome_entry_site	2490061	2490066	.	-	.	ID=id2861;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2490156	2490161	.	+	.	ID=id2862;gbkey=RBS
NC_003888.3	RefSeq	gene	2490169	2490921	.	+	.	ID=gene2320;Dbxref=GeneID:1097753;Name=SCC53.10;gbkey=Gene;gene=SCC53.10;gene_biotype=protein_coding;gene_synonym=SCC53.10;locus_tag=SCO2319
NC_003888.3	RefSeq	CDS	2490169	2490921	.	+	0	ID=cds2282;Parent=gene2320;Dbxref=Genbank:NP_626566.1,GeneID:1097753;Name=NP_626566.1;Note=SCC53.10%2C possible tetR-family regulatory protein%2C len: 250 aa%3B regions similar to many proposed regulatory proteins e.g. TR:P96856 (EMBL:Z92774) hypothetical protein from Mycobacterium tuberculosis (199 aa) fasta scores%3B opt: 492%2C z-score: 572.6%2C E(): 2e-24%2C 44.8%25 identity in 183 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=CDS;gene=SCC53.10;product=TetR family transcriptional regulator;protein_id=NP_626566.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2490358	2490498	.	+	.	ID=id2863;Dbxref=GeneID:1097753;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 54.90%2C E-value 1.3e-12;gbkey=misc_feature;gene=SCC53.10
NC_003888.3	RefSeq	gene	2490934	2491818	.	-	.	ID=gene2321;Dbxref=GeneID:1097754;Name=SCC53.11c;gbkey=Gene;gene=SCC53.11c;gene_biotype=protein_coding;gene_synonym=SCC53.11c;locus_tag=SCO2320
NC_003888.3	RefSeq	CDS	2490934	2491818	.	-	0	ID=cds2283;Parent=gene2321;Dbxref=Genbank:NP_626567.1,GeneID:1097754;Name=NP_626567.1;Note=SCC53.11c%2C hypothetical protein%2C len: 294 aa%3B similar to regions from many larger proteins eg. TR:O54230 (EMBL:AJ000264) protein kinase (EC 2.7.1.37) from Streptomyces granaticolor (701 aa) fasta scores%3B opt: 160%2C z-score: 170.0%2C E(): 0.054%2C 29.5%25 identity in 190 aa overlap and SW:P54739 (PKAA_STRCO) Ser/Thr protein kinase PkaA from Streptomyces coelicolor (543 aa) fasta scores%3B opt: 129%2C z-score: 139.5%2C E(): 2.7%2C 31.7%25 identity in 139 aa overlap. Contains TTA leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SCC53.11c;product=hypothetical protein;protein_id=NP_626567.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2491675	2491677	.	-	.	ID=id2864;Dbxref=GeneID:1097754;Note=TTA leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCC53.11c
NC_003888.3	RefSeq	ribosome_entry_site	2491827	2491830	.	-	.	ID=id2865;gbkey=RBS
NC_003888.3	RefSeq	gene	2491926	2493185	.	+	.	ID=gene2322;Dbxref=GeneID:1097755;Name=SCC53.12;gbkey=Gene;gene=SCC53.12;gene_biotype=protein_coding;gene_synonym=SCC53.12;locus_tag=SCO2321
NC_003888.3	RefSeq	CDS	2491926	2493185	.	+	0	ID=cds2284;Parent=gene2322;Dbxref=Genbank:NP_626568.1,GeneID:1097755;Name=NP_626568.1;Note=SCC53.12%2C possible hypothetical protein%2C len: 419aa%3B contains possible cleavable N-terminal signal sequence and Pfam match to entry PF00432 prenyltrans%2C Prenyltransferase and squalene oxidase repeat.;gbkey=CDS;gene=SCC53.12;product=hypothetical protein;protein_id=NP_626568.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2492304	2492435	.	+	.	ID=id2866;Dbxref=GeneID:1097755;Note=Pfam match to entry PF00432 prenyltrans%2C Prenyltransferase and squalene oxidase repeat%2C score 31.60%2C E-value 2.2e-07;gbkey=misc_feature;gene=SCC53.12
NC_003888.3	RefSeq	gene	2493182	2493844	.	+	.	ID=gene2323;Dbxref=GeneID:1097756;Name=SCC53.13;gbkey=Gene;gene=SCC53.13;gene_biotype=protein_coding;gene_synonym=SCC53.13;locus_tag=SCO2322
NC_003888.3	RefSeq	CDS	2493182	2493844	.	+	0	ID=cds2285;Parent=gene2323;Dbxref=Genbank:NP_626569.1,GeneID:1097756;Name=NP_626569.1;Note=SCC53.13%2C possible hypothetical protein%2C len: 220aa%3B contains possible cleavable N-terminal signal sequence.;gbkey=CDS;gene=SCC53.13;product=hypothetical protein;protein_id=NP_626569.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2493916	2493920	.	+	.	ID=id2867;gbkey=RBS
NC_003888.3	RefSeq	gene	2493924	2495063	.	+	.	ID=gene2324;Dbxref=GeneID:1097757;Name=SCC53.14;gbkey=Gene;gene=SCC53.14;gene_biotype=protein_coding;gene_synonym=SCC53.14;locus_tag=SCO2323
NC_003888.3	RefSeq	CDS	2493924	2495063	.	+	0	ID=cds2286;Parent=gene2324;Dbxref=Genbank:NP_626570.1,GeneID:1097757;Name=NP_626570.1;Note=SCC53.14%2C possible integral membrane protein%2C len: 379aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC53.14;product=hypothetical protein;protein_id=NP_626570.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2495049	2495054	.	+	.	ID=id2868;Dbxref=GeneID:1097757;gbkey=RBS;gene=SCC53.14
NC_003888.3	RefSeq	gene	2495060	2496751	.	+	.	ID=gene2325;Dbxref=GeneID:1097758;Name=SCC53.15;gbkey=Gene;gene=SCC53.15;gene_biotype=protein_coding;gene_synonym=SCC53.15;locus_tag=SCO2324
NC_003888.3	RefSeq	CDS	2495060	2496751	.	+	0	ID=cds2287;Parent=gene2325;Dbxref=Genbank:NP_626571.1,GeneID:1097758;Name=NP_626571.1;Note=SCC53.15%2C possible ABC transporter ATP-binding subunit%2C len: 563aa%3B similar to many eg. TR:Q9V1Q4 (EMBL:AJ248284) ABC transporter%2C ATP-binding protein from Pyrococcus abyssi (280 aa) fasta scores%3B opt: 544%2C z-score: 493.5%2C E(): 5.1e-20%2C 40.4%25 identity in 230 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran%2C ABC transporter%2C two Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and Prosite match to PS00211 ABC transporters family signature.;gbkey=CDS;gene=SCC53.15;product=ABC transporter ATP-binding protein;protein_id=NP_626571.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2495144	2495713	.	+	.	ID=id2869;Dbxref=GeneID:1097758;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 168.10%2C E-value 1.5e-46;gbkey=misc_feature;gene=SCC53.15
NC_003888.3	RefSeq	sequence_feature	2495165	2495188	.	+	.	ID=id2870;Dbxref=GeneID:1097758;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC53.15
NC_003888.3	RefSeq	sequence_feature	2495483	2495527	.	+	.	ID=id2871;Dbxref=GeneID:1097758;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCC53.15
NC_003888.3	RefSeq	sequence_feature	2496083	2496622	.	+	.	ID=id2872;Dbxref=GeneID:1097758;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 135.60%2C E-value 8.9e-37;gbkey=misc_feature;gene=SCC53.15
NC_003888.3	RefSeq	sequence_feature	2496104	2496127	.	+	.	ID=id2873;Dbxref=GeneID:1097758;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC53.15
NC_003888.3	RefSeq	ribosome_entry_site	2496736	2496740	.	+	.	ID=id2874;Dbxref=GeneID:1097758;gbkey=RBS;gene=SCC53.15
NC_003888.3	RefSeq	gene	2496748	2497599	.	+	.	ID=gene2326;Dbxref=GeneID:1097759;Name=SCC53.16;gbkey=Gene;gene=SCC53.16;gene_biotype=protein_coding;gene_synonym=SCC53.16;locus_tag=SCO2325
NC_003888.3	RefSeq	CDS	2496748	2497599	.	+	0	ID=cds2288;Parent=gene2326;Dbxref=Genbank:NP_626572.1,GeneID:1097759;Name=NP_626572.1;Note=SCC53.16%2C possible integral membrane protein%2C len: 283aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC53.16;product=hypothetical protein;protein_id=NP_626572.1;transl_table=11
NC_003888.3	RefSeq	gene	2497804	2498268	.	+	.	ID=gene2327;Dbxref=GeneID:1097760;Name=SCC53.17;gbkey=Gene;gene=SCC53.17;gene_biotype=protein_coding;gene_synonym=SCC53.17;locus_tag=SCO2326
NC_003888.3	RefSeq	CDS	2497804	2498268	.	+	0	ID=cds2289;Parent=gene2327;Dbxref=Genbank:NP_626573.1,GeneID:1097760;Name=NP_626573.1;Note=SCC53.17%2C hypothetical protein%2C len: 154 aa%3B similar to the C-terminal region of TR:Q9FBP7 (EMBL:AL391754) Streptomyces coelicolor hypothetical protein SCK7.02%2C 238 aa%3B fasta scores: opt: 477 Z-score: 516.1 bits: 102.2 E(): 4.1e-21%3B 64.356%25 identity (65.000%25 ungapped) in 101 aa overlap;gbkey=CDS;gene=SCC53.17;product=hypothetical protein;protein_id=NP_626573.1;transl_table=11
NC_003888.3	RefSeq	gene	2498289	2498675	.	-	.	ID=gene2328;Dbxref=GeneID:1097761;Name=SCC53.18c;gbkey=Gene;gene=SCC53.18c;gene_biotype=protein_coding;gene_synonym=SCC53.18c;locus_tag=SCO2327
NC_003888.3	RefSeq	CDS	2498289	2498675	.	-	0	ID=cds2290;Parent=gene2328;Dbxref=Genbank:NP_626574.1,GeneID:1097761;Name=NP_626574.1;Note=SCC53.18c%2C unknown%2C len: 128aa%3B strongly similar to TR:CAB82885 (EMBL:AJ276673) from plasmid pSCP1 from Streptomyces coelicolor (128 aa) fasta scores%3B opt: 395%2C z-score: 534.6%2C E(): 2.6e-22%2C 51.6%25 identity in 128 aa overlap.;gbkey=CDS;gene=SCC53.18c;product=hypothetical protein;protein_id=NP_626574.1;transl_table=11
NC_003888.3	RefSeq	gene	2498914	2499570	.	+	.	ID=gene2329;Dbxref=GeneID:1097762;Name=SCC53.19;gbkey=Gene;gene=SCC53.19;gene_biotype=protein_coding;gene_synonym=SCC53.19;locus_tag=SCO2328
NC_003888.3	RefSeq	CDS	2498914	2499570	.	+	0	ID=cds2291;Parent=gene2329;Dbxref=Genbank:NP_626575.1,GeneID:1097762;Name=NP_626575.1;Note=SCC53.19%2C possible dipeptidase%2C len: 218aa%3B similar to TR:Q9R6S5 (EMBL:Y18874) hypothetical 26.3 kD protein from Synechococcus PCC6301 (232 aa) fasta scores%3B opt: 258%2C z-score: 323.7%2C E(): 1.5e-10%2C 30.8%25 identity in 227 aa overlap and SW:Q06241 (VANX_ENTFC) D-alanyl-D-alanine dipeptidase (vancomycin resistance protein) (EC 3.4.13.-) from Enterococcus faecium (202 aa) fasta scores%3B opt: 173%2C z-score: 220.5%2C E(): 8.3e-05%2C 33.1%25 identity in 136 aa overlap. Contains Pfam match to entry PF01427 Peptidase_M45%2C D-ala-D-ala dipeptidase.;gbkey=CDS;gene=SCC53.19;product=dipeptidase;protein_id=NP_626575.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2499274	2499519	.	+	.	ID=id2875;Dbxref=GeneID:1097762;Note=Pfam match to entry PF01427 Peptidase_M45%2C D-ala-D-ala dipeptidase%2C score 33.30%2C E-value 3.8e-08;gbkey=misc_feature;gene=SCC53.19
NC_003888.3	RefSeq	gene	2499573	2500535	.	-	.	ID=gene2330;Dbxref=GeneID:1097763;Name=SCC53.20c;gbkey=Gene;gene=SCC53.20c;gene_biotype=protein_coding;gene_synonym=SCC53.20c;locus_tag=SCO2329
NC_003888.3	RefSeq	CDS	2499573	2500535	.	-	0	ID=cds2292;Parent=gene2330;Dbxref=Genbank:NP_626576.1,GeneID:1097763;Name=NP_626576.1;Note=SCC53.20c%2C possible transcriptional regulator%2C len: 320aa%3B similar to many eg. TR:Q9S166 (EMBL:AB023785) AdpA transcriptional activator for StrR from Streptomyces griseus (405 aa) fasta scores%3B opt: 502%2C z-score: 592.7%2C E(): 1.5e-25%2C 32.6%25 identity in 319 aa overlap and TR:Q9X7Q2 (EMBL:AL049587) transcriptional regulator from Streptomyces coelicolor (325 aa) fasta scores%3B opt: 772%2C z-score: 909.9%2C E(): 0%2C 47.5%25 identity in 318 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C Pfam match to entry PF01965 ThiJ%2C ThiJ/PfpI family and Prosite match to PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=CDS;gene=SCC53.20c;product=transcriptional regulator;protein_id=NP_626576.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2499591	2499851	.	-	.	ID=id2876;Dbxref=GeneID:1097763;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 96.90%2C E-value 4.1e-25;gbkey=misc_feature;gene=SCC53.20c
NC_003888.3	RefSeq	sequence_feature	2499612	2499740	.	-	.	ID=id2877;Dbxref=GeneID:1097763;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SCC53.20c
NC_003888.3	RefSeq	sequence_feature	2500092	2500490	.	-	.	ID=id2878;Dbxref=GeneID:1097763;Note=Pfam match to entry PF01965 ThiJ%2C ThiJ/PfpI family%2C score -8.40%2C E-value 3e-05;gbkey=misc_feature;gene=SCC53.20c
NC_003888.3	RefSeq	ribosome_entry_site	2500687	2500693	.	+	.	ID=id2879;gbkey=RBS
NC_003888.3	RefSeq	gene	2500697	2501287	.	+	.	ID=gene2331;Dbxref=GeneID:1097764;Name=SCC53.21;gbkey=Gene;gene=SCC53.21;gene_biotype=protein_coding;gene_synonym=SCC53.21;locus_tag=SCO2330
NC_003888.3	RefSeq	CDS	2500697	2501287	.	+	0	ID=cds2293;Parent=gene2331;Dbxref=Genbank:NP_626577.1,GeneID:1097764;Name=NP_626577.1;Note=SCC53.21%2C possible isochorismatase%2C len: 196 aa%3B region similar to many eg. SW:P15048 (ENTB_ECOLI) isochorismatase (EC 3.3.2.1) from Escherichia coli (285 aa) fasta scores%3B opt: 123%2C z-score: 154.2%2C E(): 0.41%2C 28.9%25 identity in 114 aa overlap. Also similar to TR:P96654 (EMBL:AB001488) hypothetical protein from Bacillus subtilis (180 aa) fasta scores%3B opt: 358%2C z-score: 433.4%2C E(): 1.1e-16%2C 36.7%25 identity in 177 aa overlap. Contains Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family.;gbkey=CDS;gene=SCC53.21;product=isochorismatase;protein_id=NP_626577.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2500763	2501197	.	+	.	ID=id2880;Dbxref=GeneID:1097764;Note=Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family%2C score 27.30%2C E-value 1.1e-07;gbkey=misc_feature;gene=SCC53.21
NC_003888.3	RefSeq	gene	2501284	2501697	.	-	.	ID=gene2332;Dbxref=GeneID:1097765;Name=SCC53.22c;gbkey=Gene;gene=SCC53.22c;gene_biotype=protein_coding;gene_synonym=SCC53.22c;locus_tag=SCO2331
NC_003888.3	RefSeq	CDS	2501284	2501697	.	-	0	ID=cds2294;Parent=gene2332;Dbxref=Genbank:NP_626578.1,GeneID:1097765;Name=NP_626578.1;Note=SCC53.22c%2C possible MarR-family transcriptional regulator%2C len: 137 aa%3B similar to many e.g. SW:Q10810 (YX18_MYCTU) hypothetical transcriptional regulator CY274.18 from Mycobacterium tuberculosis (139 aa) fasta scores%3B opt: 145%2C z-score: 193.6%2C E(): 0.0026%2C 28.9%25 identity in 128 aa overlap and SW:P42195 (PECS_ERWCH) regulatory protein PecS from Erwinia chrysanthemi (166 aa) fasta scores%3B opt: 109%2C z-score: 148.4%2C E(): 0.86%2C 25.6%25 identity in 129 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family.;gbkey=CDS;gene=SCC53.22c;product=MarR family transcriptional regulator;protein_id=NP_626578.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2501299	2501604	.	-	.	ID=id2881;Dbxref=GeneID:1097765;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 33.30%2C E-value 5.4e-06;gbkey=misc_feature;gene=SCC53.22c
NC_003888.3	RefSeq	ribosome_entry_site	2501748	2501752	.	+	.	ID=id2882;gbkey=RBS
NC_003888.3	RefSeq	gene	2501757	2502536	.	+	.	ID=gene2333;Dbxref=GeneID:1097766;Name=SCC53.23;gbkey=Gene;gene=SCC53.23;gene_biotype=protein_coding;gene_synonym=SCC53.23;locus_tag=SCO2332
NC_003888.3	RefSeq	CDS	2501757	2502536	.	+	0	ID=cds2295;Parent=gene2333;Dbxref=Genbank:NP_626579.1,GeneID:1097766;Name=NP_626579.1;Note=SCC53.23%2C possible hydrolase%2C len: 259 aa%3B similar to many e.g. SW:Q59695 (ACOC_PSEPU) acetoin dehydrogenase E2 component from Pseudomonas putida (370 aa) fasta scores%3B opt: 213%2C z-score: 235.6%2C E(): 1.2e-05%2C 30.5%25 identity in 249 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold. Also contains possible stem loop structure in %25' half of CDS.;gbkey=CDS;gene=SCC53.23;product=hydrolase;protein_id=NP_626579.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2501892	2502524	.	+	.	ID=id2883;Dbxref=GeneID:1097766;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 53.20%2C E-value 5.8e-12;gbkey=misc_feature;gene=SCC53.23
NC_003888.3	RefSeq	stem_loop	2501968	2502013	.	+	.	ID=id2884;Dbxref=GeneID:1097766;Note=Possible stem loop within CDS SCC53.23. Score 63: 21/21 (100%25) matches%2C 0 gaps%2C 4 base loop.;gbkey=stem_loop;gene=SCC53.23
NC_003888.3	RefSeq	ribosome_entry_site	2502535	2502540	.	+	.	ID=id2885;gbkey=RBS
NC_003888.3	RefSeq	gene	2502545	2502709	.	+	.	ID=gene2334;Dbxref=GeneID:1097767;Name=SCC53.24;gbkey=Gene;gene=SCC53.24;gene_biotype=protein_coding;gene_synonym=SCC53.24;locus_tag=SCO2333
NC_003888.3	RefSeq	CDS	2502545	2502709	.	+	0	ID=cds2296;Parent=gene2334;Dbxref=Genbank:NP_626580.1,GeneID:1097767;Name=NP_626580.1;Note=SCC53.24%2C conserved hypothetical protein%2C species-specific%2C len: 54aa%3B similar to others of similar size from Streptomyces coelicolor eg. TR:CAB82047 (EMBL:AL161803) conserved hypothetical protein (63 aa) fasta scores%3B opt: 100%2C z-score: 160.0%2C E(): 0.19%2C 48.6%25 identity in 37 aa overlap.;gbkey=CDS;gene=SCC53.24;product=hypothetical protein;protein_id=NP_626580.1;transl_table=11
NC_003888.3	RefSeq	gene	2502808	2504463	.	+	.	ID=gene2335;Dbxref=GeneID:1097768;Name=SCC53.25;gbkey=Gene;gene=SCC53.25;gene_biotype=protein_coding;gene_synonym=SCC53.25;locus_tag=SCO2334
NC_003888.3	RefSeq	CDS	2502808	2504463	.	+	0	ID=cds2297;Parent=gene2335;Dbxref=Genbank:NP_626581.1,GeneID:1097768;Name=NP_626581.1;Note=SCC53.25%2C possible integral membrane protein%2C len: 551aa%3B contains possible membrane-spanning hydrophobic regions. Similar to TR:CAB88445 (EMBL:AL353815) integral membrane protein from Streptomyces coelicolor (625 aa) fasta scores%3B opt: 1266%2C z-score: 1408.1%2C E(): 0%2C 42.4%25 identity in 502 aa overlap and TR:Q9RZ17 (EMBL:AE001862) proposed amino acid abc transporter%2C permease from Deinococcus radiodurans (484 aa) fasta scores%3B opt: 138%2C z-score: 156.1%2C E(): 0.32%2C 29.6%25 identity in 321 aa overlap.;gbkey=CDS;gene=SCC53.25;product=hypothetical protein;protein_id=NP_626581.1;transl_table=11
NC_003888.3	RefSeq	gene	2504417	2506702	.	-	.	ID=gene2336;Dbxref=GeneID:1097769;Name=SCC53.26c;gbkey=Gene;gene=SCC53.26c;gene_biotype=protein_coding;gene_synonym=SCC53.26c;locus_tag=SCO2335
NC_003888.3	RefSeq	CDS	2504417	2506702	.	-	0	ID=cds2298;Parent=gene2336;Dbxref=Genbank:NP_626582.1,GeneID:1097769;Name=NP_626582.1;Note=SCC53.26c%2C possible integral membrane protein%2C len: 761 aa%3B contains possible membrane-spanning hydrophobic regions. Regions similar to many eg. TR:CAB90881 (EMBL:AL355752) integral membrane protein from Streptomyces coelicolor (287 aa) fasta scores%3B opt: 627%2C z-score: 671.4%2C E(): 6.3e-30%2C 41.0%25 identity in 290 aa overlap;gbkey=CDS;gene=SCC53.26c;product=hypothetical protein;protein_id=NP_626582.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2506707	2506711	.	-	.	ID=id2886;gbkey=RBS
NC_003888.3	RefSeq	gene	2506906	2508294	.	+	.	ID=gene2337;Dbxref=GeneID:1097770;Name=SCC53.27;gbkey=Gene;gene=SCC53.27;gene_biotype=protein_coding;gene_synonym=SCC53.27;locus_tag=SCO2336
NC_003888.3	RefSeq	CDS	2506906	2508294	.	+	0	ID=cds2299;Parent=gene2337;Dbxref=Genbank:NP_626583.1,GeneID:1097770;Name=NP_626583.1;Note=SCC53.27%2C possible integral membrane transport protein%2C len: 498aa%3B similar to many eg. SW:Q47421 (OUSA_ERWCH) osmoprotectant uptake protein from Erwinia chrysanthemi (498 aa) fasta scores%3B opt: 1554%2C z-score: 1636.5%2C E(): 0%2C 50.3%25 identity in 445 aa overlap and TR:CAB76296 (EMBL:AL158057) membrane transport protein from Streptomyces coelicolor (521 aa) fasta scores%3B opt: 1703%2C z-score: 1792.6%2C E(): 0%2C 57.2%25 identity in 437 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and Prosite match to PS00217 Sugar transport proteins signature 2.;gbkey=CDS;gene=SCC53.27;product=integral membrane transport protein;protein_id=NP_626583.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2507011	2508279	.	+	.	ID=id2887;Dbxref=GeneID:1097770;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 192.60%2C E-value 6.3e-54;gbkey=misc_feature;gene=SCC53.27
NC_003888.3	RefSeq	sequence_feature	2507344	2507421	.	+	.	ID=id2888;Dbxref=GeneID:1097770;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=SCC53.27
NC_003888.3	RefSeq	gene	2508324	2508884	.	+	.	ID=gene2338;Dbxref=GeneID:1097771;Name=SCC53.28;gbkey=Gene;gene=SCC53.28;gene_biotype=protein_coding;gene_synonym=SCC53.28;locus_tag=SCO2337
NC_003888.3	RefSeq	CDS	2508324	2508884	.	+	0	ID=cds2300;Parent=gene2338;Dbxref=Genbank:NP_626584.1,GeneID:1097771;Name=NP_626584.1;Note=SCC53.28%2C possible acetyltransferase%2C len: 186 aa%3B regions similar to many of undefined function e.g. TR:CAB76276 (EMBL:AL158057) acetyltransferase from Streptomyces coelicolor (264 aa) fasta scores%3B opt: 131%2C z-score: 161.0%2C E(): 0.17%2C 37.5%25 identity in 112 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCC53.28;product=acetyltransferase;protein_id=NP_626584.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2508327	2508764	.	+	.	ID=id2889;Dbxref=GeneID:1097771;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 21.10%2C E-value 0.011;gbkey=misc_feature;gene=SCC53.28
NC_003888.3	RefSeq	ribosome_entry_site	2508870	2508874	.	+	.	ID=id2890;Dbxref=GeneID:1097771;gbkey=RBS;gene=SCC53.28
NC_003888.3	RefSeq	gene	2508881	2509552	.	+	.	ID=gene2339;Dbxref=GeneID:1097772;Name=SCC53.29;gbkey=Gene;gene=SCC53.29;gene_biotype=protein_coding;gene_synonym=SCC53.29;locus_tag=SCO2338
NC_003888.3	RefSeq	CDS	2508881	2509552	.	+	0	ID=cds2301;Parent=gene2339;Dbxref=Genbank:NP_626585.1,GeneID:1097772;Name=NP_626585.1;Note=SCC53.29%2C possible O-methyltransferase%2C len: 223 aa%3B similar to many e.g. SW:Q00719 (MDMC_STRMY) macrolide O-methyltransferase (EC 2.1.1.-) from Streptomyces mycarofaciens (221 aa) fasta scores%3B opt: 405%2C z-score: 484.6%2C E(): 1.6e-19%2C 41.1%25 identity in 190 aa overlap. Contains Pfam match to entry PF01596 Methyltransf_3%2C O-methyltransferase.;gbkey=CDS;gene=SCC53.29;product=O-methyltransferase;protein_id=NP_626585.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2508923	2509546	.	+	.	ID=id2891;Dbxref=GeneID:1097772;Note=Pfam match to entry PF01596 Methyltransf_3%2C O-methyltransferase%2C score 103.70%2C E-value 3.7e-27;gbkey=misc_feature;gene=SCC53.29
NC_003888.3	RefSeq	gene	2509609	2510091	.	-	.	ID=gene2340;Dbxref=GeneID:1097773;Name=SCC53.30c;gbkey=Gene;gene=SCC53.30c;gene_biotype=protein_coding;gene_synonym=SCC53.30c;locus_tag=SCO2339
NC_003888.3	RefSeq	CDS	2509609	2510091	.	-	0	ID=cds2302;Parent=gene2340;Dbxref=Genbank:NP_626586.1,GeneID:1097773;Name=NP_626586.1;Note=SCC53.30c%2C unknown%2C len: 160aa;gbkey=CDS;gene=SCC53.30c;product=hypothetical protein;protein_id=NP_626586.1;transl_table=11
NC_003888.3	RefSeq	gene	2510090	2510497	.	+	.	ID=gene2341;Dbxref=GeneID:1097774;Name=SCC53.31;gbkey=Gene;gene=SCC53.31;gene_biotype=protein_coding;gene_synonym=SCC53.31;locus_tag=SCO2340
NC_003888.3	RefSeq	CDS	2510090	2510497	.	+	0	ID=cds2303;Parent=gene2341;Dbxref=Genbank:NP_626587.1,GeneID:1097774;Name=NP_626587.1;Note=SCC53.31%2C hypothetical protein%2C len: 135 aa%3B similar to SW:P36677 (YHDN_ECOLI) hypothetical protein from Escherichia coli (122 aa) fasta scores%3B opt: 133%2C z-score: 164.8%2C E(): 0.1%2C 33.0%25 identity in 97 aa overlap.;gbkey=CDS;gene=SCC53.31;product=hypothetical protein;protein_id=NP_626587.1;transl_table=11
NC_003888.3	RefSeq	gene	2510508	2511071	.	-	.	ID=gene2342;Dbxref=GeneID:1097775;Name=SCC53.32c;gbkey=Gene;gene=SCC53.32c;gene_biotype=protein_coding;gene_synonym=SCC53.32c;locus_tag=SCO2341
NC_003888.3	RefSeq	CDS	2510508	2511071	.	-	0	ID=cds2304;Parent=gene2342;Dbxref=Genbank:NP_626588.1,GeneID:1097775;Name=NP_626588.1;Note=SCC53.32c%2C unknown%2C len: 204aa%3B contains Pro/Arg/Thr-rich region residues 10-80.;gbkey=CDS;gene=SCC53.32c;product=hypothetical protein;protein_id=NP_626588.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2511074	2511077	.	-	.	ID=id2892;gbkey=RBS
NC_003888.3	RefSeq	gene	2511076	2511747	.	-	.	ID=gene2343;Dbxref=GeneID:1097776;Name=SCC53.33c;gbkey=Gene;gene=SCC53.33c;gene_biotype=protein_coding;gene_synonym=SCC53.33c;locus_tag=SCO2342
NC_003888.3	RefSeq	CDS	2511076	2511747	.	-	0	ID=cds2305;Parent=gene2343;Dbxref=Genbank:NP_626589.1,GeneID:1097776;Name=NP_626589.1;Note=SCC53.33c%2C possible hypothetical protein%2C len: 223aa%3B contains a possible non-cleavable N-terminal signal sequence.;gbkey=CDS;gene=SCC53.33c;product=hypothetical protein;protein_id=NP_626589.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2511753	2511758	.	-	.	ID=id2893;gbkey=RBS
NC_003888.3	RefSeq	gene	2511913	2512446	.	+	.	ID=gene2344;Dbxref=GeneID:1097777;Name=SCC8A.01;gbkey=Gene;gene=SCC8A.01;gene_biotype=protein_coding;gene_synonym=SCC8A.01;locus_tag=SCO2343
NC_003888.3	RefSeq	CDS	2511913	2512446	.	+	0	ID=cds2306;Parent=gene2344;Dbxref=Genbank:NP_626590.1,GeneID:1097777;Name=NP_626590.1;Note=SCC8A.01%2C possible acetyltransferase%2C len: 177 aa%3B similar to many of undefined function e.g. TR:CAB59671 (EMBL:AL132674) acetyltransferase from Streptomyces coelicolor (161 aa) fasta scores%3B opt: 194%2C z-score: 245.6%2C E(): 3.2e-06%2C 33.3%25 identity in 165 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 44.30%2C E-value 2.7e-09.;gbkey=CDS;gene=SCC8A.01;product=acetyltransferase;protein_id=NP_626590.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2511922	2512341	.	+	.	ID=id2894;Dbxref=GeneID:1097777;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 44.30%2C E-value 2.7e-09;gbkey=misc_feature;gene=SCC8A.01
NC_003888.3	RefSeq	repeat_region	2512403	2512483	.	+	.	ID=id2895;Note=3x CCGACCGCGacTcCtGACGgCcgCGCT repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2512483	2514552	.	-	.	ID=gene2345;Dbxref=GeneID:1097778;Name=SCC8A.02c;gbkey=Gene;gene=SCC8A.02c;gene_biotype=protein_coding;gene_synonym=SCC8A.02c;locus_tag=SCO2344
NC_003888.3	RefSeq	CDS	2512483	2514552	.	-	0	ID=cds2307;Parent=gene2345;Dbxref=Genbank:NP_626591.1,GeneID:1097778;Name=NP_626591.1;Note=SCC8A.02c%2C possible integral membrane transport protein%2C len: 689aa%3B similar to many eg. TR:CAB89031 (EMBL:AL353870) membrane transport protein from Streptomyces coelicolor (714 aa) fasta scores%3B opt: 1767%2C z-score: 1907.0%2C E(): 0%2C 46.1%25 identity in 670 aa overlap and TR:P96712 (EMBL:D50098) multidrug transporter from Bacillus subtilis (512 aa) fasta scores%3B opt: 1168%2C z-score: 1262.8%2C E(): 0%2C 37.6%25 identity in 495 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC8A.02c;product=integral membrane transport protein;protein_id=NP_626591.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2513092	2514456	.	-	.	ID=id2896;Dbxref=GeneID:1097778;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -80.20%2C E-value 0.00054;gbkey=misc_feature;gene=SCC8A.02c
NC_003888.3	RefSeq	ribosome_entry_site	2514557	2514562	.	-	.	ID=id2897;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2514588	2514591	.	+	.	ID=id2898;gbkey=RBS
NC_003888.3	RefSeq	gene	2514601	2515959	.	+	.	ID=gene2346;Dbxref=GeneID:1097779;Name=SCC8A.03;gbkey=Gene;gene=SCC8A.03;gene_biotype=protein_coding;gene_synonym=SCC8A.03;locus_tag=SCO2345
NC_003888.3	RefSeq	CDS	2514601	2515959	.	+	0	ID=cds2308;Parent=gene2346;Dbxref=Genbank:NP_626592.1,GeneID:1097779;Name=NP_626592.1;Note=SCC8A.03%2C possible peptidodoglycan-binding membrane protein%2C len: 452 aa%3B contains Pfam match to entry PF01471 PG_binding_1%2C  peptidoglycan binding domain%2C score 35.30%2C E-value 1.4e-06 and possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCC8A.03;product=peptidodoglycan-binding membrane protein;protein_id=NP_626592.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2515759	2515947	.	+	.	ID=id2899;Dbxref=GeneID:1097779;Note=Pfam match to entry PF01471 PG_binding_1%2C  peptidoglycan binding domain%2C score 35.30%2C E-value 1.4e-06;gbkey=misc_feature;gene=SCC8A.03
NC_003888.3	RefSeq	gene	2515998	2516663	.	-	.	ID=gene2347;Dbxref=GeneID:1097780;Name=SCC8A.04c;gbkey=Gene;gene=SCC8A.04c;gene_biotype=protein_coding;gene_synonym=SCC8A.04c;locus_tag=SCO2346
NC_003888.3	RefSeq	CDS	2515998	2516663	.	-	0	ID=cds2309;Parent=gene2347;Dbxref=Genbank:NP_626593.1,GeneID:1097780;Name=NP_626593.1;Note=SCC8A.04c%2C possible hydrolase%2C len: 221 aa%3B similar to many e.g. TR:P96428 (EMBL:Z79692) ORF24 from Sinorhizobium meliloti (233 aa) fasta scores%3B opt: 526%2C z-score: 576.9%2C E(): 1.1e-24%2C TR:AAF18566 (EMBL:AF043232) glycerol-3-phosphate phosphatase from Emericella nidulans (Aspergillus nidulans) (236 aa) fasta scores%3B opt: 352%2C z-score: 390.2%2C E(): 2.9e-14%2C 31.8%25 identity in 233 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase and Prosite match to PS01228 Hypothetical cof family signature 1.;gbkey=CDS;gene=SCC8A.04c;product=hydrolase;protein_id=NP_626593.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2516094	2516633	.	-	.	ID=id2900;Dbxref=GeneID:1097780;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 135.50%2C E-value 9.9e-37;gbkey=misc_feature;gene=SCC8A.04c
NC_003888.3	RefSeq	sequence_feature	2516592	2516627	.	-	.	ID=id2901;Dbxref=GeneID:1097780;Note=PS01228 Hypothetical cof family signature 1;gbkey=misc_feature;gene=SCC8A.04c
NC_003888.3	RefSeq	ribosome_entry_site	2516671	2516674	.	-	.	ID=id2902;gbkey=RBS
NC_003888.3	RefSeq	gene	2516812	2517393	.	-	.	ID=gene2348;Dbxref=GeneID:1097781;Name=SCC8A.05c;gbkey=Gene;gene=SCC8A.05c;gene_biotype=protein_coding;gene_synonym=SCC8A.05c;locus_tag=SCO2347
NC_003888.3	RefSeq	CDS	2516812	2517393	.	-	0	ID=cds2310;Parent=gene2348;Dbxref=Genbank:NP_626594.1,GeneID:1097781;Name=NP_626594.1;Note=SCC8A.05c%2C possible integral membrane protein%2C len: aa%3B similar to others of undefined function eg. TR:P96229 (EMBL:Z83864) hypothetical 32.0 kD protein from Mycobacterium tuberculosis (302 aa) fasta scores%3B opt: 245%2C z-score: 295.9%2C E(): 5.1e-09%2C 32.8%25 identity in 195 aa overlap. Contains possible membrane-spanning hydrophobic regions and Pfam match to entry PF01169 UPF0016%2C Uncharacterized protein family UPF0016.;gbkey=CDS;gene=SCC8A.05c;product=hypothetical protein;protein_id=NP_626594.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2516818	2517381	.	-	.	ID=id2903;Dbxref=GeneID:1097781;Note=Pfam match to entry PF01169 UPF0016%2C Uncharacterized protein family UPF0016%2C score -13.30%2C E-value 1.6e-07;gbkey=misc_feature;gene=SCC8A.05c
NC_003888.3	RefSeq	ribosome_entry_site	2517398	2517401	.	-	.	ID=id2904;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2517881	2517888	.	+	.	ID=id2905;gbkey=RBS
NC_003888.3	RefSeq	gene	2517893	2518537	.	+	.	ID=gene2349;Dbxref=GeneID:1097782;Name=SCC8A.06;gbkey=Gene;gene=SCC8A.06;gene_biotype=protein_coding;gene_synonym=SCC8A.06;locus_tag=SCO2348
NC_003888.3	RefSeq	CDS	2517893	2518537	.	+	0	ID=cds2311;Parent=gene2349;Dbxref=Genbank:NP_626595.1,GeneID:1097782;Name=NP_626595.1;Note=SCC8A.06%2C hypothetical protein%2C len: 214 aa%3B similar to TR:P95123 (EMBL:Z83018) hypothetical protein from Mycobacterium tuberculosis (237 aa) fasta scores%3B opt: 335%2C z-score: 412.6%2C E(): 1.6e-15%2C 35.4%25 identity in 223 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC8A.06;product=hypothetical protein;protein_id=NP_626595.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2518615	2518621	.	+	.	ID=id2906;gbkey=RBS
NC_003888.3	RefSeq	gene	2518626	2520308	.	+	.	ID=gene2350;Dbxref=GeneID:1097783;Name=SCC8A.07;gbkey=Gene;gene=SCC8A.07;gene_biotype=protein_coding;gene_synonym=SCC8A.07;locus_tag=SCO2349
NC_003888.3	RefSeq	CDS	2518626	2520308	.	+	0	ID=cds2312;Parent=gene2350;Dbxref=Genbank:NP_626596.1,GeneID:1097783;Name=NP_626596.1;Note=SCC8A.07%2C unknown%2C len: 560 aa%3B similar to TR:O52813 (EMBL:AJ223998) hypothetical protein from Amycolatopsis orientalis (508 aa) fasta scores%3B opt: 1020%2C z-score: 1115.5%2C E(): 0%2C 48.0%25 identity in 542 aa overlap.;gbkey=CDS;gene=SCC8A.07;product=hypothetical protein;protein_id=NP_626596.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2520549	2520554	.	+	.	ID=id2907;gbkey=RBS
NC_003888.3	RefSeq	gene	2520564	2521025	.	+	.	ID=gene2351;Dbxref=GeneID:1097784;Name=SCC8A.08;gbkey=Gene;gene=SCC8A.08;gene_biotype=protein_coding;gene_synonym=SCC8A.08;locus_tag=SCO2350
NC_003888.3	RefSeq	CDS	2520564	2521025	.	+	0	ID=cds2313;Parent=gene2351;Dbxref=Genbank:NP_626597.1,GeneID:1097784;Name=NP_626597.1;Note=SCC8A.08%2C possible integral membrane protein%2C len: 153 aa%3B similar to TR:O86323 (EMBL:Z83866) hypothetical protein from Mycobacterium tuberculosis (141 aa) fasta scores%3B opt: 391%2C z-score: 477.0%2C E(): 4.2e-19%2C 48.5%25 identity in 130 aa overlap%2C to TR:CAB85407 (EMBL:AL162758) conserved inner membrane hypothetical protein from Neisseria meningitidis (132 aa) fasta scores%3B opt: 328%2C z-score: 402.9%2C E(): 5.7e-15%2C 41.9%25 identity in 129 aa overlap and to TR:Q9K461 (EMBL:AL359215) Streptomyces coelicolor integral membrane protein SC2H12.23c%2C 151 aa%3B fasta scores: opt: 533 Z-score: 626.7 E(): 2.8e-27%3B 58.741%25 identity in 143 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC8A.08;product=hypothetical protein;protein_id=NP_626597.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2521191	2521196	.	+	.	ID=id2908;gbkey=RBS
NC_003888.3	RefSeq	gene	2521200	2521838	.	+	.	ID=gene2352;Dbxref=GeneID:1097785;Name=SCC8A.09;gbkey=Gene;gene=SCC8A.09;gene_biotype=protein_coding;gene_synonym=SCC8A.09;locus_tag=SCO2351
NC_003888.3	RefSeq	CDS	2521200	2521838	.	+	0	ID=cds2314;Parent=gene2352;Dbxref=Genbank:NP_626598.1,GeneID:1097785;Name=NP_626598.1;Note=SCC8A.09%2C possible integral membrane protein%2C len: 212aa%3B similar to many DedA-family members eg. TR:O86706 (EMBL:AL031515)  integral membrane protein from Streptomyces coelicolor (208 aa) fasta scores%3B opt: 216%2C z-score: 247.9%2C E(): 2.4e-06%2C 31.4%25 identity in 191 aa overlap and SW:P09548 (DEDA_ECOLI) DedA protein from Escherichia coli (219 aa) fasta scores%3B opt: 155%2C z-score: 181.4%2C E(): 0.012%2C 26.9%25 identity in 167 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC8A.09;product=hypothetical protein;protein_id=NP_626598.1;transl_table=11
NC_003888.3	RefSeq	gene	2521928	2522161	.	-	.	ID=gene2353;Dbxref=GeneID:1097786;Name=SCC8A.10c;gbkey=Gene;gene=SCC8A.10c;gene_biotype=protein_coding;gene_synonym=SCC8A.10c;locus_tag=SCO2352
NC_003888.3	RefSeq	CDS	2521928	2522161	.	-	0	ID=cds2315;Parent=gene2353;Dbxref=Genbank:NP_626599.1,GeneID:1097786;Name=NP_626599.1;Note=SCC8A.10c%2C unknown%2C len: 77aa;gbkey=CDS;gene=SCC8A.10c;product=hypothetical protein;protein_id=NP_626599.1;transl_table=11
NC_003888.3	RefSeq	gene	2522166	2522807	.	-	.	ID=gene2354;Dbxref=GeneID:1097787;Name=SCC8A.11c;gbkey=Gene;gene=SCC8A.11c;gene_biotype=protein_coding;gene_synonym=SCC8A.11c;locus_tag=SCO2353
NC_003888.3	RefSeq	CDS	2522166	2522807	.	-	0	ID=cds2316;Parent=gene2354;Dbxref=Genbank:NP_626600.1,GeneID:1097787;Name=NP_626600.1;Note=SCC8A.11c%2C unknown%2C len: 213aa%3B weakly similar to others eg. TR:Q9XAQ0 (EMBL:AL078618) acetyltransferase from Streptomyces coelicolor (187 aa) fasta scores%3B opt: 133%2C z-score: 173.2%2C E(): 0.035%2C 27.2%25 identity in 162 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCC8A.11c;product=hypothetical protein;protein_id=NP_626600.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2522171	2522175	.	-	.	ID=id2909;Dbxref=GeneID:1097787;gbkey=RBS;gene=SCC8A.11c
NC_003888.3	RefSeq	sequence_feature	2522253	2522699	.	-	.	ID=id2910;Dbxref=GeneID:1097787;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 19.40%2C E-value 0.015;gbkey=misc_feature;gene=SCC8A.11c
NC_003888.3	RefSeq	gene	2522814	2523149	.	+	.	ID=gene2355;Dbxref=GeneID:1097788;Name=SCC8A.12;gbkey=Gene;gene=SCC8A.12;gene_biotype=protein_coding;gene_synonym=SCC8A.12;locus_tag=SCO2354
NC_003888.3	RefSeq	CDS	2522814	2523149	.	+	0	ID=cds2317;Parent=gene2355;Dbxref=Genbank:NP_626601.1,GeneID:1097788;Name=NP_626601.1;Note=SCC8A.12%2C unknown%2C len: 111aa;gbkey=CDS;gene=SCC8A.12;product=hypothetical protein;protein_id=NP_626601.1;transl_table=11
NC_003888.3	RefSeq	gene	2523200	2523274	.	-	.	ID=gene2356;Dbxref=GeneID:3240010;Name=SCOt10;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt10
NC_003888.3	RefSeq	tRNA	2523200	2523274	.	-	.	ID=rna16;Parent=gene2356;Dbxref=GeneID:3240010;Note=tRNA Val anticodon TAC%2C Cove score 85.35;gbkey=tRNA;product=tRNA-Val
NC_003888.3	RefSeq	exon	2523200	2523274	.	-	.	ID=id2911;Parent=rna16;Dbxref=GeneID:3240010;Note=tRNA Val anticodon TAC%2C Cove score 85.35;gbkey=tRNA;product=tRNA-Val
NC_003888.3	RefSeq	ribosome_entry_site	2523486	2523491	.	+	.	ID=id2912;gbkey=RBS
NC_003888.3	RefSeq	gene	2523500	2524270	.	+	.	ID=gene2357;Dbxref=GeneID:1097789;Name=SCC8A.13;gbkey=Gene;gene=SCC8A.13;gene_biotype=protein_coding;gene_synonym=SCC8A.13;locus_tag=SCO2355
NC_003888.3	RefSeq	CDS	2523500	2524270	.	+	0	ID=cds2318;Parent=gene2357;Dbxref=Genbank:NP_626602.1,GeneID:1097789;Name=NP_626602.1;Note=SCC8A.13%2C possible lipoprotein%2C len: 256aa%3B contains an appropriately positioned Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SCC8A.13;product=lipoprotein;protein_id=NP_626602.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2523548	2523580	.	+	.	ID=id2913;Dbxref=GeneID:1097789;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCC8A.13
NC_003888.3	RefSeq	ribosome_entry_site	2524332	2524335	.	+	.	ID=id2914;gbkey=RBS
NC_003888.3	RefSeq	gene	2524342	2525745	.	+	.	ID=gene2358;Dbxref=GeneID:1097790;Name=SCC8A.14;gbkey=Gene;gene=SCC8A.14;gene_biotype=protein_coding;gene_synonym=SCC8A.14;locus_tag=SCO2356
NC_003888.3	RefSeq	CDS	2524342	2525745	.	+	0	ID=cds2319;Parent=gene2358;Dbxref=Genbank:NP_626603.1,GeneID:1097790;Name=NP_626603.1;Note=SCC8A.14%2C possible membrane protein%2C len: 467aa%3B contains a possible membrane-spanning hydrophobic region close to the N-terminus.;gbkey=CDS;gene=SCC8A.14;product=hypothetical protein;protein_id=NP_626603.1;transl_table=11
NC_003888.3	RefSeq	gene	2525802	2526020	.	+	.	ID=gene2359;Dbxref=GeneID:1097791;Name=SCC8A.15;gbkey=Gene;gene=SCC8A.15;gene_biotype=protein_coding;gene_synonym=SCC8A.15;locus_tag=SCO2357
NC_003888.3	RefSeq	CDS	2525802	2526020	.	+	0	ID=cds2320;Parent=gene2359;Dbxref=Genbank:NP_626604.1,GeneID:1097791;Name=NP_626604.1;Note=SCC8A.15%2C unknown%2C doubtful CDS%2C len: 72aa;gbkey=CDS;gene=SCC8A.15;product=hypothetical protein;protein_id=NP_626604.1;transl_table=11
NC_003888.3	RefSeq	gene	2526064	2526702	.	-	.	ID=gene2360;Dbxref=GeneID:1097792;Name=SCC8A.16c;gbkey=Gene;gene=SCC8A.16c;gene_biotype=protein_coding;gene_synonym=SCC8A.16c;locus_tag=SCO2358
NC_003888.3	RefSeq	CDS	2526064	2526702	.	-	0	ID=cds2321;Parent=gene2360;Dbxref=Genbank:NP_626605.1,GeneID:1097792;Name=NP_626605.1;Note=SCC8A.16c%2C possible two-component system response regulator%2C len: 212aa%3B similar to many proposed regulators eg. TR:CAB81859 (EMBL:AL161691) two-component system response regulator from Streptomyces coelicolor (210 aa) fasta scores%3B opt: 736%2C z-score: 875.7%2C E(): 0%2C 61.0%25 identity in 210 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and helix-turn-helix motif 164-185aa.;gbkey=CDS;gene=SCC8A.16c;product=two-component system response regulator;protein_id=NP_626605.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2526070	2526267	.	-	.	ID=id2915;Dbxref=GeneID:1097792;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 28.00%2C E-value 6.2e-05;gbkey=misc_feature;gene=SCC8A.16c
NC_003888.3	RefSeq	sequence_feature	2526349	2526702	.	-	.	ID=id2916;Dbxref=GeneID:1097792;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 48.60%2C E-value 1.4e-10;gbkey=misc_feature;gene=SCC8A.16c
NC_003888.3	RefSeq	gene	2526699	2527817	.	-	.	ID=gene2361;Dbxref=GeneID:1097793;Name=SCC8A.17c;gbkey=Gene;gene=SCC8A.17c;gene_biotype=protein_coding;gene_synonym=SCC8A.17c;locus_tag=SCO2359
NC_003888.3	RefSeq	CDS	2526699	2527817	.	-	0	ID=cds2322;Parent=gene2361;Dbxref=Genbank:NP_626606.1,GeneID:1097793;Name=NP_626606.1;Note=SCC8A.17c%2C possible two-component sensor kinase%2C len: 372aa%3B similar to many from Streptomyces coelicolor eg. TR:CAB81858 (EMBL:AL161691) two-component system sensor kinase (431 aa) fasta scores%3B opt: 690%2C z-score: 750.8%2C E(): 0%2C 39.3%25 identity in 399 aa overlap and SW:P27668 (UHPB_SALTY) sensor protein UhpB from Salmonella typhimurium (500 aa) fasta scores%3B opt: 269%2C z-score: 295.6%2C E(): 5.3e-09%2C 25.5%25 identity in 377 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC8A.17c;product=two-component system sensor kinase;protein_id=NP_626606.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2526714	2526717	.	-	.	ID=id2917;Dbxref=GeneID:1097793;gbkey=RBS;gene=SCC8A.17c
NC_003888.3	RefSeq	gene	2527923	2528804	.	+	.	ID=gene2362;Dbxref=GeneID:1097794;Name=SCC8A.18;gbkey=Gene;gene=SCC8A.18;gene_biotype=protein_coding;gene_synonym=SCC8A.18;locus_tag=SCO2360
NC_003888.3	RefSeq	CDS	2527923	2528804	.	+	0	ID=cds2323;Parent=gene2362;Dbxref=Genbank:NP_626607.1,GeneID:1097794;Name=NP_626607.1;Note=SC8A.18%2C membrane protein%2C len: 293 aa%3B region similar to many of undefined function eg. SW:Q48630 (APL_LACLA) alkaline phosphatase like protein from Lactococcus lactis (242 aa) fasta scores%3B opt: 554%2C z-score: 549.3%2C E(): 3.9e-23%2C 46.4%25 identity in 194 aa overlap. Contains Pfam match to entry PF00597 DedA%2C DedA family. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC8A.18;product=hypothetical protein;protein_id=NP_626607.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2528058	2528540	.	+	.	ID=id2918;Dbxref=GeneID:1097794;Note=Pfam match to entry PF00597 DedA%2C DedA family%2C score 28.60%2C E-value 0.00015;gbkey=misc_feature;gene=SCC8A.18
NC_003888.3	RefSeq	gene	2528722	2529534	.	-	.	ID=gene2363;Dbxref=GeneID:1097795;Name=SCC8A.19c;gbkey=Gene;gene=SCC8A.19c;gene_biotype=protein_coding;gene_synonym=SCC8A.19c;locus_tag=SCO2361
NC_003888.3	RefSeq	CDS	2528722	2529534	.	-	0	ID=cds2324;Parent=gene2363;Dbxref=Genbank:NP_626608.1,GeneID:1097795;Name=NP_626608.1;Note=SCC8A.19c%2C unknown%2C len: 270aa;gbkey=CDS;gene=SCC8A.19c;product=hypothetical protein;protein_id=NP_626608.1;transl_table=11
NC_003888.3	RefSeq	gene	2529534	2532053	.	-	.	ID=gene2364;Dbxref=GeneID:1097796;Name=SCC8A.20c;gbkey=Gene;gene=SCC8A.20c;gene_biotype=protein_coding;gene_synonym=SCC8A.20c;locus_tag=SCO2362
NC_003888.3	RefSeq	CDS	2529534	2532053	.	-	0	ID=cds2325;Parent=gene2364;Dbxref=Genbank:NP_626609.1,GeneID:1097796;Name=NP_626609.1;Note=SCC8A.20c%2C unknown%2C len: 839 aa%3B regions similar to others of undefined function e.g. TR:AAF11767 (EMBL:AE002054) hypothetical protein from Deinococcus radiodurans (353 aa) fasta scores%3B opt: 463%2C z-score: 489.2%2C E(): 8.7e-20%2C 40.3%25 identity in 355 aa overlap;gbkey=CDS;gene=SCC8A.20c;product=hypothetical protein;protein_id=NP_626609.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2529543	2529546	.	-	.	ID=id2919;Dbxref=GeneID:1097796;gbkey=RBS;gene=SCC8A.20c
NC_003888.3	RefSeq	ribosome_entry_site	2532063	2532067	.	-	.	ID=id2920;gbkey=RBS
NC_003888.3	RefSeq	gene	2532132	2533298	.	-	.	ID=gene2365;Dbxref=GeneID:1097797;Name=SCC8A.21c;gbkey=Gene;gene=SCC8A.21c;gene_biotype=protein_coding;gene_synonym=SCC8A.21c;locus_tag=SCO2363
NC_003888.3	RefSeq	CDS	2532132	2533298	.	-	0	ID=cds2326;Parent=gene2365;Dbxref=Genbank:NP_626610.1,GeneID:1097797;Name=NP_626610.1;Note=SCC8A.21c%2C possible ATP/GTP-binding protein%2C len: 388aa%3B similar to TR:AAF11768 (EMBL:AE002054) hypothetical protein from Deinococcus radiodurans (310 aa) fasta scores%3B opt: 146%2C z-score: 175.2%2C E(): 0.027%2C 32.0%25 identity in 347 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCC8A.21c;product=ATP/GTP-binding protein;protein_id=NP_626610.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2532390	2532413	.	-	.	ID=id2921;Dbxref=GeneID:1097797;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC8A.21c
NC_003888.3	RefSeq	ribosome_entry_site	2533302	2533307	.	-	.	ID=id2922;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2533495	2533500	.	+	.	ID=id2923;gbkey=RBS
NC_003888.3	RefSeq	gene	2533506	2534501	.	+	.	ID=gene2366;Dbxref=GeneID:1097798;Name=SCC8A.22;gbkey=Gene;gene=SCC8A.22;gene_biotype=protein_coding;gene_synonym=SCC8A.22;locus_tag=SCO2364
NC_003888.3	RefSeq	CDS	2533506	2534501	.	+	0	ID=cds2327;Parent=gene2366;Dbxref=Genbank:NP_626611.1,GeneID:1097798;Name=NP_626611.1;Note=SCC8A.22%2C unknown%2C len: 331 aa%3B regions similar to many of undefined function eg. TR:Q9ZBZ1 (EMBL:AL034355) hypothetical protein from Streptomyces coelicolor (482 aa) fasta scores%3B opt: 686%2C z-score: 521.2%2C E(): 1.4e-21%2C 51.0%25 identity in 247 aa overlap and SW:P18782 (TERE_ALCSP) tellurium resistance protein from plasmid IncHI2 pMER610 of Alcaligenes sp. (191 aa) fasta scores%3B opt: 339%2C z-score: 271.3%2C E(): 1.2e-07%2C 35.9%25 identity in 195 aa overlap;gbkey=CDS;gene=SCC8A.22;product=hypothetical protein;protein_id=NP_626611.1;transl_table=11
NC_003888.3	RefSeq	gene	2534532	2535269	.	-	.	ID=gene2367;Dbxref=GeneID:1097799;Name=SCC8A.23c;gbkey=Gene;gene=SCC8A.23c;gene_biotype=protein_coding;gene_synonym=SCC8A.23c;locus_tag=SCO2365
NC_003888.3	RefSeq	CDS	2534532	2535269	.	-	0	ID=cds2328;Parent=gene2367;Dbxref=Genbank:NP_626612.1,GeneID:1097799;Name=NP_626612.1;Note=SCC8A.23c%2C unknown%2C len: 245 aa%3B similar to proteins associated with resistance to tellurium salts eg. TR:Q44313 (EMBL:M20238) tellurium salts resistance protein from plasmid pMER610 of Alcaligenes sp. (339 aa) fasta scores%3B opt: 408%2C z-score: 510.3%2C E(): 5.8e-21%2C 38.4%25 identity in 219 aa overlap;gbkey=CDS;gene=SCC8A.23c;product=hypothetical protein;protein_id=NP_626612.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2535277	2535283	.	-	.	ID=id2924;gbkey=RBS
NC_003888.3	RefSeq	gene	2535421	2536563	.	-	.	ID=gene2368;Dbxref=GeneID:1097800;Name=SCC8A.24c;gbkey=Gene;gene=SCC8A.24c;gene_biotype=protein_coding;gene_synonym=SCC8A.24c;locus_tag=SCO2366
NC_003888.3	RefSeq	CDS	2535421	2536563	.	-	0	ID=cds2329;Parent=gene2368;Dbxref=Genbank:NP_626613.1,GeneID:1097800;Name=NP_626613.1;Note=SCC8A.24c%2C possible integral membrane protein%2C len: 380aa%3B similar to other eg. TR:Q9Z654 (EMBL:AF102543) hypothetical protein from Zymomonas mobilis (339 aa) fasta scores%3B opt: 428%2C z-score: 504.2%2C E(): 1.3e-20%2C 43.3%25 identity in 374 aa overlap and TR:CAB57414 (EMBL:AL121746) integral membrane protein from Streptomyces coelicolor (370 aa) fasta scores%3B opt: 2038%2C z-score: 2376.3%2C E(): 0%2C 85.6%25 identity in 369 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC8A.24c;product=hypothetical protein;protein_id=NP_626613.1;transl_table=11
NC_003888.3	RefSeq	gene	2536613	2537188	.	-	.	ID=gene2369;Dbxref=GeneID:1097801;Name=SCC8A.25c;gbkey=Gene;gene=SCC8A.25c;gene_biotype=protein_coding;gene_synonym=SCC8A.25c;locus_tag=SCO2367
NC_003888.3	RefSeq	CDS	2536613	2537188	.	-	0	ID=cds2330;Parent=gene2369;Dbxref=Genbank:NP_626614.1,GeneID:1097801;Name=NP_626614.1;Note=SCC8A.25c%2C conserved hypothetical protein%2C len: 191aa%3B similar to proteins associated with resistance to tellurium salts e.g. SW:Q52357 (TERD_SERMA) tellurium resistance protein TerD from Serratia marcescens (192 aa) fasta scores%3B opt: 853%2C z-score: 1006.2%2C E(): 0%2C 67.2%25 identity in 192 aa overlap. Also strongly similar to others from Streptomyces coelicolor e.g. TR:CAB62770 (EMBL:AL356892) and neighbouring CDS SCC8A.26c.;gbkey=CDS;gene=SCC8A.25c;product=hypothetical protein;protein_id=NP_626614.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2537199	2537203	.	-	.	ID=id2925;gbkey=RBS
NC_003888.3	RefSeq	gene	2537340	2537915	.	-	.	ID=gene2370;Dbxref=GeneID:1097802;Name=SCC8A.26c;gbkey=Gene;gene=SCC8A.26c;gene_biotype=protein_coding;gene_synonym=SCC8A.26c;locus_tag=SCO2368
NC_003888.3	RefSeq	CDS	2537340	2537915	.	-	0	ID=cds2331;Parent=gene2370;Dbxref=Genbank:NP_626615.1,GeneID:1097802;Name=NP_626615.1;Note=SCC8A.26c%2C conserved hypothetical protein%2C len: 191aa%3B similar to proteins associated with resistance to tellurium salts e.g. SW:Q52357 (TERD_SERMA) tellurium resistance protein TerD from Serratia marcescens (192 aa) fasta scores%3B opt: 866%2C z-score: 1036.9%2C E(): 0%2C 65%2C8%25 identity in 190 aa overlap. Also strongly similar to others from Streptomyces coelicolor e.g. TR:CAB62770 (EMBL:AL356892) and neighbouring CDS SCC8A.26c;gbkey=CDS;gene=SCC8A.26c;product=hypothetical protein;protein_id=NP_626615.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2537920	2537924	.	-	.	ID=id2926;gbkey=RBS
NC_003888.3	RefSeq	gene	2538097	2538555	.	-	.	ID=gene2371;Dbxref=GeneID:1097803;Name=SCC8A.27c;gbkey=Gene;gene=SCC8A.27c;gene_biotype=protein_coding;gene_synonym=SCC8A.27c;locus_tag=SCO2369
NC_003888.3	RefSeq	CDS	2538097	2538555	.	-	0	ID=cds2332;Parent=gene2371;Dbxref=Genbank:NP_626616.1,GeneID:1097803;Name=NP_626616.1;Note=SCC8A.27c%2C possible thiol-specific antioxidant protein%2C len: 152 aa%3B similar to many e.g. SW:O24364 (BAS1_SPIOL) 2-cys peroxiredoxin Bas1 precursor from Spinacia oleracea (Spinach) (265 aa) fasta scores%3B opt: 352%2C z-score: 450.7%2C E(): 1.2e-17%2C 39.9%25 identity in 158 aa overlap and SW:Q10520 (Y01J_MYCTU) hypothetical protein from Mycobacterium tuberculosis (153 aa) fasta scores%3B opt: 507%2C z-score: 648.2%2C E(): 1.2e-28%2C 48.7%25 identity in 150 aa overlap. Contains Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family.;gbkey=CDS;gene=SCC8A.27c;product=thiol-specific antioxidant protein;protein_id=NP_626616.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2538115	2538543	.	-	.	ID=id2927;Dbxref=GeneID:1097803;Note=Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family%2C score 176.30%2C E-value 4.8e-49;gbkey=misc_feature;gene=SCC8A.27c
NC_003888.3	RefSeq	gene	2538717	2539196	.	-	.	ID=gene2372;Dbxref=GeneID:1097804;Name=SCC8A.28c;gbkey=Gene;gene=SCC8A.28c;gene_biotype=protein_coding;gene_synonym=SCC8A.28c;locus_tag=SCO2370
NC_003888.3	RefSeq	CDS	2538717	2539196	.	-	0	ID=cds2333;Parent=gene2372;Dbxref=Genbank:NP_626617.1,GeneID:1097804;Name=NP_626617.1;Note=SCC8A.28c%2C unknown%2C len: 159 aa%3B similar to others from mycobacteria e.g. SW:Q10521 (YM39_MYCTU) hypothetical protein from Mycobacterium tuberculosis (158 aa) fasta scores%3B opt: 447%2C z-score: 518.6%2C E(): 2e-21%2C 50.4%25 identity in 141 aa overlap;gbkey=CDS;gene=SCC8A.28c;product=hypothetical protein;protein_id=NP_626617.1;transl_table=11
NC_003888.3	RefSeq	gene	2539576	2542332	.	+	.	ID=gene2373;Dbxref=GeneID:1097805;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;gene_synonym=aceE2,SCC8A.29;locus_tag=SCO2371
NC_003888.3	RefSeq	CDS	2539576	2542332	.	+	0	ID=cds2334;Parent=gene2373;Dbxref=Genbank:NP_626618.1,GeneID:1097805;Name=NP_626618.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase subunit E1;protein_id=NP_626618.1;transl_table=11
NC_003888.3	RefSeq	gene	2542460	2542768	.	-	.	ID=gene2374;Dbxref=GeneID:1097806;Name=SCC8A.30c;gbkey=Gene;gene=SCC8A.30c;gene_biotype=protein_coding;gene_synonym=SCC8A.30c;locus_tag=SCO2372
NC_003888.3	RefSeq	CDS	2542460	2542768	.	-	0	ID=cds2335;Parent=gene2374;Dbxref=Genbank:NP_626619.1,GeneID:1097806;Name=NP_626619.1;Note=SCC8A.30c%2C possible small hydrophobic protein%2C len: 102 aa%3B similar to TR:O86580 (EMBL:AL031184) small hydrophobic protein from Streptomyces coelicolor (97 aa) fasta scores%3B opt: 119%2C z-score: 161.8%2C E(): 0.15%2C 33.3%25 identity in 81 aa overlap. Contains possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCC8A.30c;product=small hydrophobic protein;protein_id=NP_626619.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2542771	2542777	.	-	.	ID=id2928;gbkey=RBS
NC_003888.3	RefSeq	gene	2543007	2544617	.	-	.	ID=gene2375;Dbxref=GeneID:1097807;Name=SC4A7.01c;gbkey=Gene;gene=SC4A7.01c;gene_biotype=protein_coding;gene_synonym=SC4A7.01c,SCC8A.31c,tcmA;locus_tag=SCO2373
NC_003888.3	RefSeq	CDS	2543007	2544617	.	-	0	ID=cds2336;Parent=gene2375;Dbxref=Genbank:NP_733568.1,GeneID:1097807;Name=NP_733568.1;Note=SCC8A.31c%2C tcmA%2C tetracenomycin C efflux protein%2C partial CDS%2C len: >331aa%3B similar to many export protein especially SW:TCMA_STRGA( EMBL:M80674) tetracenomycin C resistance and export protein from Streptomyces glaucescens (538 aa) fasta scores%3B opt: 1285%2C z-score: 1299.8%2C E(): 0%2C 59.8%25 identity in 323 aa overlap.~SC1E12.01c%2C tcmA%2C tetracenomycin C efflux protein%2C partial CDS%2C len: >103 aa. Highly similar over the available sequence to Streptomyces glaucescens SW:TCMA_STRGA(EMBL:M80674) tetracenomycin C resistance and export protein (538 aa)%2C fasta scores opt: 500 z-score: 635.7 E(): 5e-28 70.9%25 identity in 103 aa overlap. Also similar to several from Streptomyces coelicolor: SW:AC22_STRCO(EMBL:M64683) probable actinorhodin transporter ACTII-2 (578 aa)%2C fasta scores opt: 246 z-score: 316.7 E(): 2.9e-10 35.8%25 identity in 109 aa overlap and SCF37.21c (EMBL:AL133210) probable export protein (533 aa)%2C fasta scores opt: 378 z-score: 434.6 E(): 8e-19 47.6%25 identity in 103 aa overlap. Contains possible membrane spanning hydrophobic domains.~SC4A7.01c%2C tcmA%2C tetracenomycin C resistance and export protein (partial CDS)%2C len: >173 aa%3B highly similar to SW:TCMA_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA%2C 538 aa%3B fasta scores: opt: 813 z-score: 922.3 E(): 0%3B 78.6%25 identity in 159 aa overlap%2C to SW:AC22_STRCO (EMBL:M64683) Streptomyces coelicolor probable actinorhidin transporter ActII-2%2C 578 aa%3B fasta scores: opt: 396 z-score: 452.6 E(): 7.9e-18%3B 37.8%25 identity in 164 aa overlap and to S. coelicolor SCF37.21c%2C 533 aa%3B fasta scores: opt: 641 z-score: 623.5 E(): 2.4e-29%3B 56.7%25 identity in 171 aa overlap;gbkey=CDS;gene=SC4A7.01c;product=tetracenomycin C efflux protein;protein_id=NP_733568.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2544722	2544726	.	+	.	ID=id2929;gbkey=RBS
NC_003888.3	RefSeq	gene	2544733	2545416	.	+	.	ID=gene2376;Dbxref=GeneID:1097808;Name=SC4A7.02;gbkey=Gene;gene=SC4A7.02;gene_biotype=protein_coding;gene_synonym=SC4A7.02;locus_tag=SCO2374
NC_003888.3	RefSeq	CDS	2544733	2545416	.	+	0	ID=cds2337;Parent=gene2376;Dbxref=Genbank:NP_626620.1,GeneID:1097808;Name=NP_626620.1;Note=SC4A7.02%2C probable transcriptional regulator%2C len: 227 aa%3B similar to SW:TCMR_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C transcriptional repressor TcmR%2C 226 aa%3B fasta scores: opt: 594 z-score: 727.4 E(): 0%3B 46.5%25 identity in 215 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif at residues 49..70 (+3.84 SD);gbkey=CDS;gene=SC4A7.02;product=transcriptional regulator;protein_id=NP_626620.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2544829	2544954	.	+	.	ID=id2930;Dbxref=GeneID:1097808;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 64.10%2C E-value 4.5e-16;gbkey=misc_feature;gene=SC4A7.02
NC_003888.3	RefSeq	gene	2545471	2546691	.	+	.	ID=gene2377;Dbxref=GeneID:1097809;Name=SC4A7.03;gbkey=Gene;gene=SC4A7.03;gene_biotype=protein_coding;gene_synonym=SC4A7.03;locus_tag=SCO2375
NC_003888.3	RefSeq	CDS	2545471	2546691	.	+	0	ID=cds2338;Parent=gene2377;Dbxref=Genbank:NP_626621.1,GeneID:1097809;Name=NP_626621.1;Note=SC4A7.03%2C possible hypothetical protein%2C len: 406 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q9X8R0 (EMBL:AL049754) Streptomyces coelicolor hypothetical 33.9 kD protein%2C SCH10.21c%2C 329 aa%3B fasta scores: opt: 634 z-score: 714.7 E(): 2e-32%3B 39.3%25 identity in 346 aa overlap. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SC4A7.03;product=hypothetical protein;protein_id=NP_626621.1;transl_table=11
NC_003888.3	RefSeq	gene	2546758	2547645	.	+	.	ID=gene2378;Dbxref=GeneID:1097810;Name=SC4A7.04;gbkey=Gene;gene=SC4A7.04;gene_biotype=protein_coding;gene_synonym=SC4A7.04;locus_tag=SCO2376
NC_003888.3	RefSeq	CDS	2546758	2547645	.	+	0	ID=cds2339;Parent=gene2378;Dbxref=Genbank:NP_626622.1,GeneID:1097810;Name=NP_626622.1;Note=SC4A7.04%2C hypothetical protein%2C len: 295 aa%3B similar to TR:Q9L067 (EMBL:AL163641) Streptomyces coelicolor hypothetical protein SCC105.18%2C 298 aa%3B fasta scores: opt: 556 Z-score: 591.0 E(): 2.8e-25%3B 37.415%25 identity in 294 aa overlap;gbkey=CDS;gene=SC4A7.04;product=hypothetical protein;protein_id=NP_626622.1;transl_table=11
NC_003888.3	RefSeq	gene	2547771	2548787	.	-	.	ID=gene2379;Dbxref=GeneID:1097811;Name=SC4A7.05c;gbkey=Gene;gene=SC4A7.05c;gene_biotype=protein_coding;gene_synonym=SC4A7.05c;locus_tag=SCO2377
NC_003888.3	RefSeq	CDS	2547771	2548787	.	-	0	ID=cds2340;Parent=gene2379;Dbxref=Genbank:NP_626623.1,GeneID:1097811;Name=NP_626623.1;Note=SC4A7.05c%2C probable aldo/keto reductase%2C len: 338 aa%3B similar to TR:Q9X5G7 (EMBL:AF124928) Streptomyces clavuligerus  aldo/keto reductase family 2 enzyme Cvm1%2C 344 aa%3B fasta scores: opt: 916 z-score: 1035.7 E(): 0%3B 47.7%25 identity in 331 aa overlap;gbkey=CDS;gene=SC4A7.05c;product=aldo/keto reductase;protein_id=NP_626623.1;transl_table=11
NC_003888.3	RefSeq	gene	2548784	2549374	.	-	.	ID=gene2380;Dbxref=GeneID:1097812;Name=SC4A7.06c;gbkey=Gene;gene=SC4A7.06c;gene_biotype=protein_coding;gene_synonym=SC4A7.06c;locus_tag=SCO2378
NC_003888.3	RefSeq	CDS	2548784	2549374	.	-	0	ID=cds2341;Parent=gene2380;Dbxref=Genbank:NP_626624.1,GeneID:1097812;Name=NP_626624.1;Note=SC4A7.06c%2C possible merR-family transciptional regulator%2C len: 196 aa%3B similar to SW:TIPA_STRLI (EMBL:S64314) Streptomyces lividans transcriptional activator TipA%2C 253 aa%3B fasta scores: opt: 187 z-score: 225.2 E(): 3.7e-05%3B 32.7%25 identity in 110 aa overlap. Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and a possible helix-turn-helix motif at residues 72..93 (+3.19 SD);gbkey=CDS;gene=SC4A7.06c;product=MerR family transcriptional regulator;protein_id=NP_626624.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2548795	2548799	.	-	.	ID=id2931;Dbxref=GeneID:1097812;gbkey=RBS;gene=SC4A7.06c
NC_003888.3	RefSeq	sequence_feature	2549045	2549152	.	-	.	ID=id2932;Dbxref=GeneID:1097812;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 46.60%2C E-value 5.4e-10;gbkey=misc_feature;gene=SC4A7.06c
NC_003888.3	RefSeq	gene	2549404	2549871	.	+	.	ID=gene2381;Dbxref=GeneID:1097813;Name=SC4A7.07;gbkey=Gene;gene=SC4A7.07;gene_biotype=protein_coding;gene_synonym=SC4A7.07;locus_tag=SCO2379
NC_003888.3	RefSeq	CDS	2549404	2549871	.	+	0	ID=cds2342;Parent=gene2381;Dbxref=Genbank:NP_626625.1,GeneID:1097813;Name=NP_626625.1;Note=SC4A7.07%2C possible acetyltransferase%2C len: 155 aa%3B similar to TR:Q55840 (EMBL:D64004) Synechocystis sp hypothetical 23.4 kD protein%2C 204 aa%3B fasta scores: opt: 134 z-score: 171.7 E(): 0.035%3B 26.6%25 identity in 124 aa overlap and to SW:RIMI_ECOLI (EMBL:X06117) Escherichia coli ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) RimI%2C 148 aa%3B fasta scores: opt: 115 z-score: 151.3 E(): 0.48%3B 34.5%25 identity in 55 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC4A7.07;product=acetyltransferase;protein_id=NP_626625.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2549413	2549835	.	+	.	ID=id2933;Dbxref=GeneID:1097813;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 22.00%2C E-value 0.009;gbkey=misc_feature;gene=SC4A7.07
NC_003888.3	RefSeq	gene	2549891	2550712	.	+	.	ID=gene2382;Dbxref=GeneID:1097814;Name=SC4A7.08;gbkey=Gene;gene=SC4A7.08;gene_biotype=protein_coding;gene_synonym=SC4A7.08;locus_tag=SCO2380
NC_003888.3	RefSeq	CDS	2549891	2550712	.	+	0	ID=cds2343;Parent=gene2382;Dbxref=Genbank:NP_626626.1,GeneID:1097814;Name=NP_626626.1;Note=SC4A7.08%2C hypothetical protein%2C len: 273 aa%3B similar to TR:O53531 (EMBL:AL021925) Mycobacterium tuberculosis hypothetical 28.a kD protein MTV022.07c%2C 272 aa%3B fasta scores: opt: 1011 z-score: 1132.5 E(): 0%3B 56.8%25 identity in 271 aa overlap;gbkey=CDS;gene=SC4A7.08;product=hypothetical protein;protein_id=NP_626626.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2550890	2550893	.	+	.	ID=id2934;gbkey=RBS
NC_003888.3	RefSeq	gene	2550901	2551737	.	+	.	ID=gene2383;Dbxref=GeneID:1097815;Name=SC4A7.09;gbkey=Gene;gene=SC4A7.09;gene_biotype=protein_coding;gene_synonym=SC4A7.09;locus_tag=SCO2381
NC_003888.3	RefSeq	CDS	2550901	2551737	.	+	0	ID=cds2344;Parent=gene2383;Dbxref=Genbank:NP_626627.1,GeneID:1097815;Name=NP_626627.1;Note=SC4A7.09%2C hypothetical protein%2C len: 278 aa%3B simialr to various hypothetical proteins%2C e.g. TR:Q9X8M2 (EMBL:AL049628) Streptomyces coelicolor hypothetical 31.5 kD protein SCE94.16c%2C 280 aa%3B fasta scores: opt: 1333 z-score: 1595.1 E(): 0%3B 76.4%25 identity in 271 aa overlap;gbkey=CDS;gene=SC4A7.09;product=hypothetical protein;protein_id=NP_626627.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2551695	2551700	.	+	.	ID=id2935;Dbxref=GeneID:1097815;gbkey=RBS;gene=SC4A7.09
NC_003888.3	RefSeq	gene	2551706	2551903	.	+	.	ID=gene2384;Dbxref=GeneID:1097816;Name=SC4A7.10;gbkey=Gene;gene=SC4A7.10;gene_biotype=protein_coding;gene_synonym=SC4A7.10;locus_tag=SCO2382
NC_003888.3	RefSeq	CDS	2551706	2551903	.	+	0	ID=cds2345;Parent=gene2384;Dbxref=Genbank:NP_626628.1,GeneID:1097816;Name=NP_626628.1;Note=SC4A7.10%2C hypothetical protein%2C len: 65 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q9Z544 (EMBL:AL035212) Streptomyces coelicolor hypothetical 8.2 kD protein%2C 77 aa%3B fasta scores: opt: 186 z-score: 270.2 E(): 1.1e-07%3B 60.0%25 identity in 55 aa overlap%2C to S. coelicolor SC2H4.17c%2C 81 aa%3B fasta scores: opt: 165 z-score: 212.0 E(): 2e-06%3B 50.0%25 identity in 60 aa overlap and to S. coelicolor SC4G2.04%2C 67 aa%3B fasta scores: opt: 149 z-score: 195.0 E(): 1.8e-05%3B 51.0%25 identity in 51 aa overlap;gbkey=CDS;gene=SC4A7.10;product=hypothetical protein;protein_id=NP_626628.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2552243	2552247	.	+	.	ID=id2936;gbkey=RBS
NC_003888.3	RefSeq	gene	2552256	2556893	.	+	.	ID=gene2385;Dbxref=GeneID:1097817;Name=SC4A7.11;gbkey=Gene;gene=SC4A7.11;gene_biotype=protein_coding;gene_synonym=SC4A7.11;locus_tag=SCO2383
NC_003888.3	RefSeq	CDS	2552256	2556893	.	+	0	ID=cds2346;Parent=gene2385;Dbxref=Genbank:NP_626629.1,GeneID:1097817;Name=NP_626629.1;Note=SC4A7.11%2C possible hypothetical protein%2C len: 1545 aa%3B similar in its central part to SW:STFR_ECOLI (EMBL:AE000234) Escherichia coli side tail fiber protein homolog from labmboid prophage RAC StfR or B1372%2C 1120 aa%3B fasta scores: opt: 494 Z-score: 414.4 E(): 1.9e-15%3B 31.461%25 identity in 445 aa overlap. Contains high percentage of aa residues A and G. Contains Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain and possible N-terminal region signal peptide sequence. Also contains possible colied-coil regions at approx. residues 655..761%2C 789..846 and 1098..1163;gbkey=CDS;gene=SC4A7.11;product=hypothetical protein;protein_id=NP_626629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2553405	2553791	.	+	.	ID=id2937;Dbxref=GeneID:1097817;Note=Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies.%2C score 54.10%2C E-value 3.2e-12;gbkey=misc_feature;gene=SC4A7.11
NC_003888.3	RefSeq	ribosome_entry_site	2556879	2556882	.	+	.	ID=id2938;Dbxref=GeneID:1097817;gbkey=RBS;gene=SC4A7.11
NC_003888.3	RefSeq	gene	2556886	2557305	.	+	.	ID=gene2386;Dbxref=GeneID:1097818;Name=SC4A7.12;gbkey=Gene;gene=SC4A7.12;gene_biotype=protein_coding;gene_synonym=SC4A7.12;locus_tag=SCO2384
NC_003888.3	RefSeq	CDS	2556886	2557305	.	+	0	ID=cds2347;Parent=gene2386;Dbxref=Genbank:NP_626630.1,GeneID:1097818;Name=NP_626630.1;Note=SC4A7.12%2C unknown%2C len: 139 aa;gbkey=CDS;gene=SC4A7.12;product=hypothetical protein;protein_id=NP_626630.1;transl_table=11
NC_003888.3	RefSeq	gene	2557326	2557982	.	-	.	ID=gene2387;Dbxref=GeneID:1097819;Name=SC4A7.13c;gbkey=Gene;gene=SC4A7.13c;gene_biotype=protein_coding;gene_synonym=SC4A7.13c;locus_tag=SCO2385
NC_003888.3	RefSeq	CDS	2557326	2557982	.	-	0	ID=cds2348;Parent=gene2387;Dbxref=Genbank:NP_626631.1,GeneID:1097819;Name=NP_626631.1;Note=SC4A7.13c%2C hypothetical protein%2C len: 218 aa%3B similar to various hypothetical proteins%2C e.g. TR:Y181_MYCTU (EMBL:Z97050) Mycobacterium tuberculosis hypothetical 26.3 kD protein MCTI28.21c%2C 244 aa%3B fasta scores: opt: 410 z-score: 496.1 E(): 3e-20%3B 39.0%25 identity in 236 aa overlap;gbkey=CDS;gene=SC4A7.13c;product=hypothetical protein;protein_id=NP_626631.1;transl_table=11
NC_003888.3	RefSeq	gene	2558045	2559250	.	+	.	ID=gene2388;Dbxref=GeneID:1097820;Name=SC4A7.14;gbkey=Gene;gene=SC4A7.14;gene_biotype=protein_coding;gene_synonym=SC4A7.14;locus_tag=SCO2386
NC_003888.3	RefSeq	CDS	2558045	2559250	.	+	0	ID=cds2349;Parent=gene2388;Dbxref=Genbank:NP_626632.1,GeneID:1097820;Name=NP_626632.1;Note=SC4A7.14%2C hypothetical protein%2C len: 401 aa%3B similar to various hypothetical proteins%2C e.g. SW:YM42_MYCTU (EMBL:Z70692) Mycobacterium tuberculosis hypothetical 44.6 kD protein RV2242%2C 414 aa%3B fasta scores: opt: 581 z-score: 650.9 E(): 7.2e-29%3B 43.0%25 identity in 409 aa overlap;gbkey=CDS;gene=SC4A7.14;product=hypothetical protein;protein_id=NP_626632.1;transl_table=11
NC_003888.3	RefSeq	gene	2559340	2560290	.	+	.	ID=gene2389;Dbxref=GeneID:1097821;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;gene_synonym=fabD,SC4A7.15;locus_tag=SCO2387
NC_003888.3	RefSeq	CDS	2559340	2560290	.	+	0	ID=cds2350;Parent=gene2389;Dbxref=Genbank:NP_626633.1,GeneID:1097821;Name=NP_626633.1;gbkey=CDS;gene=fabD;product=ACP S-malonyltransferase;protein_id=NP_626633.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2559343	2560287	.	+	.	ID=id2939;Dbxref=GeneID:1097821;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 92.50%2C E-value 8.6e-24;gbkey=misc_feature;gene=fabD
NC_003888.3	RefSeq	ribosome_entry_site	2560294	2560297	.	+	.	ID=id2940;gbkey=RBS
NC_003888.3	RefSeq	gene	2560307	2561338	.	+	.	ID=gene2390;Dbxref=GeneID:1097822;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;gene_synonym=fabH,SC4A7.16;locus_tag=SCO2388
NC_003888.3	RefSeq	CDS	2560307	2561338	.	+	0	ID=cds2351;Parent=gene2390;Dbxref=Genbank:NP_626634.1,GeneID:1097822;Name=NP_626634.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs%3B in Pseudomonas this protein is involved in quinolone signal biosynthesis;gbkey=CDS;gene=fabH;product=3-oxoacyl-ACP synthase III;protein_id=NP_626634.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2561432	2561435	.	+	.	ID=id2941;gbkey=RBS
NC_003888.3	RefSeq	gene	2561443	2561691	.	+	.	ID=gene2391;Dbxref=GeneID:1097823;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;gene_synonym=SC4A7.17;locus_tag=SCO2389
NC_003888.3	RefSeq	CDS	2561443	2561691	.	+	0	ID=cds2352;Parent=gene2391;Dbxref=Genbank:NP_626635.1,GeneID:1097823;Name=NP_626635.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;gene=acpP;product=acyl carrier protein;protein_id=NP_626635.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2561470	2561673	.	+	.	ID=id2942;Dbxref=GeneID:1097823;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 68.90%2C E-value 2e-17;gbkey=misc_feature;gene=acpP
NC_003888.3	RefSeq	ribosome_entry_site	2561786	2561789	.	+	.	ID=id2943;gbkey=RBS
NC_003888.3	RefSeq	gene	2561801	2563090	.	+	.	ID=gene2392;Dbxref=GeneID:1097824;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;gene_synonym=fabF,SC4A7.18;locus_tag=SCO2390
NC_003888.3	RefSeq	CDS	2561801	2563090	.	+	0	ID=cds2353;Parent=gene2392;Dbxref=Genbank:NP_626636.1,GeneID:1097824;Name=NP_626636.1;gbkey=CDS;gene=fabF;product=3-oxoacyl-ACP synthase;protein_id=NP_626636.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2561822	2563084	.	+	.	ID=id2944;Dbxref=GeneID:1097824;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 132.70%2C E-value 6.8e-36;gbkey=misc_feature;gene=fabF
NC_003888.3	RefSeq	gene	2563192	2563686	.	-	.	ID=gene2393;Dbxref=GeneID:1097825;Name=SC4A7.19c;gbkey=Gene;gene=SC4A7.19c;gene_biotype=protein_coding;gene_synonym=SC4A7.19c;locus_tag=SCO2391
NC_003888.3	RefSeq	CDS	2563192	2563686	.	-	0	ID=cds2354;Parent=gene2393;Dbxref=Genbank:NP_626637.1,GeneID:1097825;Name=NP_626637.1;Note=SC4A7.19c%2C hypothetical protein%2C len: 164 aa%3B identical to previously sequenced TR:Q54209 (EMBL:L43074) Streptomyces glaucescens ORF5%2C 164 aa and similar to TR:O53530 (EMBL:AL021925) Mycobacterium tuberculosis hypothetical 18.9 kD protein%2C 177 aa%3B fasta scores: opt: 489 z-score: 628.5 E(): 1.3e-27%3B 42.6%25 identity in 162 aa overlap;gbkey=CDS;gene=SC4A7.19c;product=hypothetical protein;protein_id=NP_626637.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2563692	2563696	.	-	.	ID=id2945;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2563928	2563931	.	+	.	ID=id2946;gbkey=RBS
NC_003888.3	RefSeq	gene	2563944	2564861	.	+	.	ID=gene2394;Dbxref=GeneID:1097826;Name=SC4A7.20;gbkey=Gene;gene=SC4A7.20;gene_biotype=protein_coding;gene_synonym=SC4A7.20;locus_tag=SCO2392
NC_003888.3	RefSeq	CDS	2563944	2564861	.	+	0	ID=cds2355;Parent=gene2394;Dbxref=Genbank:NP_626638.1,GeneID:1097826;Name=NP_626638.1;Note=SC4A7.20%2C possible lipoprotein%2C len: 305 aa%3B similar to TR:Q9X7W9 (EMBL:AL049485) Streptomyces coelicolor hypothetical 28.1 kD protein%2C 261 aa%3B fasta scores: opt: 137 z-score: 160.4 E(): 0.15%3B 31.0%25 identity in 187 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4A7.20;product=lipoprotein;protein_id=NP_626638.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2564016	2564048	.	+	.	ID=id2947;Dbxref=GeneID:1097826;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4A7.20
NC_003888.3	RefSeq	gene	2564900	2565871	.	+	.	ID=gene2395;Dbxref=GeneID:1097827;Name=SC4A7.21;gbkey=Gene;gene=SC4A7.21;gene_biotype=protein_coding;gene_synonym=SC4A7.21;locus_tag=SCO2393
NC_003888.3	RefSeq	CDS	2564900	2565871	.	+	0	ID=cds2356;Parent=gene2395;Dbxref=Genbank:NP_626639.1,GeneID:1097827;Name=NP_626639.1;Note=SC4A7.21%2C probable aldose 1-epimerase%2C len: 323 aa%3B similar to TR:Q9WYB8 (EMBL:AE001710) Thermotoga maritima aldose 1-epimerase TM0282%2C 356 aa%3B fasta scores: opt: 677 z-score: 752.5 E(): 0%3B 47.5%25 identity in 345 aa overlap%2C to SW:GALM_ECOLI (EMBL:U13636) Escherichia coli aldose 1-epimerase (EC 5.1.3.3) (mutarotase) GalM%2C 346 aa%3B fasta scores: opt: 543 z-score: 605.1 E(): 2.5e-26%3B 39.0%25 identity in 346 aa overlap and to S. coelicolor SC4A7.35%2C 366 aa%3B fasta scores: opt: 838 z-score: 839.4 E(): 0%3B 54.2%25 identity in 347 aa overlap. Contains Pfam match to entry PF01263 Aldose_epim%2C Aldose 1-epimerase and match to PRosite entry PS00545 Aldose 1-epimerase active site;gbkey=CDS;gene=SC4A7.21;product=aldose 1-epimerase;protein_id=NP_626639.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2564912	2565862	.	+	.	ID=id2948;Dbxref=GeneID:1097827;Note=Pfam match to entry PF01263 Aldose_epim%2C Aldose 1-epimerase%2C score 373.10%2C E-value 2.8e-108;gbkey=misc_feature;gene=SC4A7.21
NC_003888.3	RefSeq	sequence_feature	2565404	2565433	.	+	.	ID=id2949;Dbxref=GeneID:1097827;Note=PS00545 Aldose 1-epimerase active site;gbkey=misc_feature;gene=SC4A7.21
NC_003888.3	RefSeq	gene	2566207	2567460	.	+	.	ID=gene2396;Dbxref=GeneID:1097828;Name=SC4A7.22;gbkey=Gene;gene=SC4A7.22;gene_biotype=protein_coding;gene_synonym=SC4A7.22;locus_tag=SCO2394
NC_003888.3	RefSeq	CDS	2566207	2567460	.	+	0	ID=cds2357;Parent=gene2396;Dbxref=Genbank:NP_626640.1,GeneID:1097828;Name=NP_626640.1;Note=SC4A7.22%2C hypothetical protein%2C len: 417 aa%3B similar to TR:Q9I783 (EMBL:AE004444) Pseudomonas aeruginosa hypothetical protein PA0049%2C 553 aa%3B fasta scores: opt: 566 Z-score: 609.9 E(): 2.4e-26%3B 35.800%25 identity in 500 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4A7.22;product=hypothetical protein;protein_id=NP_626640.1;transl_table=11
NC_003888.3	RefSeq	gene	2567432	2568256	.	-	.	ID=gene2397;Dbxref=GeneID:1097829;Name=SC4A7.23c;gbkey=Gene;gene=SC4A7.23c;gene_biotype=protein_coding;gene_synonym=SC4A7.23c;locus_tag=SCO2395
NC_003888.3	RefSeq	CDS	2567432	2568256	.	-	0	ID=cds2358;Parent=gene2397;Dbxref=Genbank:NP_626641.1,GeneID:1097829;Name=NP_626641.1;Note=SC4A7.23c%2C possible integral membrane protein%2C len: 274 aa%3B low similarities to SW:CYSZ_ECOLI (EMBL:AE000329) Escheichia coli CysZ protein%2C 253 aa%3B fasta scores: opt: 258 z-score: 295.2 E(): 4.6e-09%3B 25.8%25 identity in 244 aa overlap;gbkey=CDS;gene=SC4A7.23c;product=hypothetical protein;protein_id=NP_626641.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2568296	2568355	.	+	.	ID=id2950;Note=10x repeat (G G T C G/A C/G);gbkey=repeat_region
NC_003888.3	RefSeq	gene	2568352	2568771	.	-	.	ID=gene2398;Dbxref=GeneID:1097830;Name=SC4A7.24c;gbkey=Gene;gene=SC4A7.24c;gene_biotype=protein_coding;gene_synonym=SC4A7.24c;locus_tag=SCO2396
NC_003888.3	RefSeq	CDS	2568352	2568771	.	-	0	ID=cds2359;Parent=gene2398;Dbxref=Genbank:NP_626642.1,GeneID:1097830;Name=NP_626642.1;Note=SC4A7.24c%2C hypothetical protein%2C len: 139 aa%3B similar to TR:O68390 (EMBL:AF036166) Xanthomonas campestris organic hydroperoxide resistance protein Ohr%2C 142 aa%3B fasta scores: opt: 478 z-score: 578.1 E(): 8e-25%3B 55.2%25 identity in 134 aa overlap and to TR:P70736 (EMBL:Y09102) Acinetobacter sp. hypothetical 15.2 kD protein%2C 143 aa%3B fasta scores: opt: 442 z-score: 535.7 E(): 1.9e-22%3B 53.3%25 identity in 137 aa overlap;gbkey=CDS;gene=SC4A7.24c;product=hypothetical protein;protein_id=NP_626642.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2568782	2568787	.	-	.	ID=id2951;gbkey=RBS
NC_003888.3	RefSeq	gene	2568888	2569982	.	-	.	ID=gene2399;Dbxref=GeneID:1097831;Name=SC4A7.25c;gbkey=Gene;gene=SC4A7.25c;gene_biotype=protein_coding;gene_synonym=SC4A7.25c;locus_tag=SCO2397
NC_003888.3	RefSeq	CDS	2568888	2569982	.	-	0	ID=cds2360;Parent=gene2399;Dbxref=Genbank:NP_626643.1,GeneID:1097831;Name=NP_626643.1;Note=SC4A7.25c%2C probable oxidoreductase%2C len: 364 aa%3B similar to SW:YNCB_ECOLI (EMBL:AE000242) Escherichia coli NADP-dependent oxidoreductase in TehB-RhsE intergenic region YncB%2C 353 aa%3B fasta scores: opt: 950 z-score: 1018.4 E(): 0%3B 43.6%25 identity in 335 aa overlap and to SW:P2_ARATH (EMBL:Z49268) Arabidopsis thaliana probable NADP-dependent oxidoreductase P2%2C 342 aa%3B fasta scores: opt: 880 z-score: 944.2 E(): 0%3B 45.4%25 identity in 328 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SC4A7.25c;product=oxidoreductase;protein_id=NP_626643.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2568894	2569856	.	-	.	ID=id2952;Dbxref=GeneID:1097831;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score -3.70%2C E-value 1.5e-09;gbkey=misc_feature;gene=SC4A7.25c
NC_003888.3	RefSeq	gene	2570030	2570485	.	+	.	ID=gene2400;Dbxref=GeneID:1097832;Name=SC4A7.26;gbkey=Gene;gene=SC4A7.26;gene_biotype=protein_coding;gene_synonym=SC4A7.26;locus_tag=SCO2398
NC_003888.3	RefSeq	CDS	2570030	2570485	.	+	0	ID=cds2361;Parent=gene2400;Dbxref=Genbank:NP_626644.1,GeneID:1097832;Name=NP_626644.1;Note=SC4A7.26%2C possible marR-family transcriptonal regulator%2C len: 151 aa%3B similar to TR:Q9WZS3 (EMBL:AE001749) Thermotoga maritima transcriptional regulator%2C %2C marR family TM0816%2C 142 aa%3B fasta scores: opt: 167 z-score: 210.9 E(): 0.00023%3B 31.7%25 identity in 139 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SC4A7.26;product=MarR family transcriptonal regulator;protein_id=NP_626644.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2570153	2570458	.	+	.	ID=id2953;Dbxref=GeneID:1097832;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 72.60%2C E-value 8e-18;gbkey=misc_feature;gene=SC4A7.26
NC_003888.3	RefSeq	gene	2570546	2571427	.	+	.	ID=gene2401;Dbxref=GeneID:1097833;Name=SC4A7.27;gbkey=Gene;gene=SC4A7.27;gene_biotype=protein_coding;gene_synonym=SC4A7.27;locus_tag=SCO2399
NC_003888.3	RefSeq	CDS	2570546	2571427	.	+	0	ID=cds2362;Parent=gene2401;Dbxref=Genbank:NP_626645.1,GeneID:1097833;Name=NP_626645.1;Note=SC4A7.27%2C hypothetical protein%2C len: 293 aa%3B low similarity to TR:Q9XAH5 (EMBL:AL096825) Streptomyces coelicolor hypothetical 60.3 kD protein SC6G3.05%2C 588 aa%3B fasta scores: opt: 128 z-score: 149.7 E(): 0.59%3B 28.8%25 identity in 313 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC4A7.27;product=hypothetical protein;protein_id=NP_626645.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2570993	2571376	.	+	.	ID=id2954;Dbxref=GeneID:1097833;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 15.40%2C E-value 0.034;gbkey=misc_feature;gene=SC4A7.27
NC_003888.3	RefSeq	gene	2571440	2572189	.	-	.	ID=gene2402;Dbxref=GeneID:1097834;Name=SC4A7.28c;gbkey=Gene;gene=SC4A7.28c;gene_biotype=protein_coding;gene_synonym=SC4A7.28c;locus_tag=SCO2400
NC_003888.3	RefSeq	CDS	2571440	2572189	.	-	0	ID=cds2363;Parent=gene2402;Dbxref=Genbank:NP_626646.1,GeneID:1097834;Name=NP_626646.1;Note=SC4A7.28c%2C membrane protein%2C len: 249 aa. Contains 1 possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4A7.28c;product=hypothetical protein;protein_id=NP_626646.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2571479	2571619	.	-	.	ID=id2955;Dbxref=GeneID:1097834;Note=proline rich region;gbkey=misc_feature;gene=SC4A7.28c
NC_003888.3	RefSeq	gene	2572404	2573570	.	+	.	ID=gene2403;Dbxref=GeneID:1097835;Name=SC4A7.29;gbkey=Gene;gene=SC4A7.29;gene_biotype=protein_coding;gene_synonym=SC4A7.29;locus_tag=SCO2401
NC_003888.3	RefSeq	CDS	2572404	2573570	.	+	0	ID=cds2364;Parent=gene2403;Dbxref=Genbank:NP_626647.1,GeneID:1097835;Name=NP_626647.1;Note=SC4A7.29%2C possible dehydratase%2C len: 388 aa%3B similar to C-terminal region of SW:DGOA_ECOLI (EMBL:L10328) Escherichia coli galactonate dehydratase (EC 4.2.1.6) GdoA%2C 587 aa%3B fasta scores: opt: 751 z-score: 864.7 E(): 0%3B 35.0%25 identity in 383 aa overlap. Contains Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family;gbkey=CDS;gene=SC4A7.29;product=dehydratase;protein_id=NP_626647.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2572410	2573441	.	+	.	ID=id2956;Dbxref=GeneID:1097835;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family%2C score 197.80%2C E-value 1.7e-55;gbkey=misc_feature;gene=SC4A7.29
NC_003888.3	RefSeq	gene	2573567	2574583	.	+	.	ID=gene2404;Dbxref=GeneID:1097836;Name=SC4A7.30;gbkey=Gene;gene=SC4A7.30;gene_biotype=protein_coding;gene_synonym=SC4A7.30;locus_tag=SCO2402
NC_003888.3	RefSeq	CDS	2573567	2574583	.	+	0	ID=cds2365;Parent=gene2404;Dbxref=Genbank:NP_626648.1,GeneID:1097836;Name=NP_626648.1;Note=SC4A7.30%2C possible dehydrogenase%2C len: 338 aa%3B similar to SW:TDH_ECOLI (EMBL:X06690) Escherichia coli threonine 3-dehydrogenase (EC 1.1.1.103) Tdh%2C 341 aa%3B fasta scores: opt: 468 z-score: 507.9 E(): 6.6e-21%3B 28.4%25 identity in 328 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and match to Prosite entry PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=CDS;gene=SC4A7.30;product=dehydrogenase;protein_id=NP_626648.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2573579	2574565	.	+	.	ID=id2957;Dbxref=GeneID:1097836;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 219.20%2C E-value 5.9e-62;gbkey=misc_feature;gene=SC4A7.30
NC_003888.3	RefSeq	sequence_feature	2573747	2573791	.	+	.	ID=id2958;Dbxref=GeneID:1097836;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=SC4A7.30
NC_003888.3	RefSeq	gene	2574719	2575690	.	+	.	ID=gene2405;Dbxref=GeneID:1097837;Name=SC4A7.31;gbkey=Gene;gene=SC4A7.31;gene_biotype=protein_coding;gene_synonym=SC4A7.31;locus_tag=SCO2403
NC_003888.3	RefSeq	CDS	2574719	2575690	.	+	0	ID=cds2366;Parent=gene2405;Dbxref=Genbank:NP_626649.1,GeneID:1097837;Name=NP_626649.1;Note=SC4A7.31%2C hypothetical protein%2C len: 323 aa%3B similar to TR:O27045 (EMBL:AE000870) Methanobacterium thermoautotrophicum hypothetical 32.8 kD protein MTH964%2C 299 aa%3B fasta scores: opt: 685 z-score: 763.8 E(): 0%3B 40.3%25 identity in 300 aa overlap;gbkey=CDS;gene=SC4A7.31;product=hypothetical protein;protein_id=NP_626649.1;transl_table=11
NC_003888.3	RefSeq	gene	2575786	2576895	.	+	.	ID=gene2406;Dbxref=GeneID:1097838;Name=SC4A7.32;gbkey=Gene;gene=SC4A7.32;gene_biotype=protein_coding;gene_synonym=SC4A7.32;locus_tag=SCO2404
NC_003888.3	RefSeq	CDS	2575786	2576895	.	+	0	ID=cds2367;Parent=gene2406;Dbxref=Genbank:NP_626650.1,GeneID:1097838;Name=NP_626650.1;Note=SC4A7.32%2C probable sugar-binding receptor%2C len: 369 aa%3B similar to SW:CVE2_AGRTU (EMBL:X97456) Agrobacterium tumefaciens multiple sugar-binding periplasmic receptor chve precursor%2C ChvE%2C 354 aa%3B fasta scores: opt: 1391 z-score: 1497.2 E(): 0%3B 60.3%25 identity in 350 aa overlap. Contains possible signal peptide sequence%2C Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and Prosite match correctly situated PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC4A7.32;product=sugar-binding receptor;protein_id=NP_626650.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2575825	2575857	.	+	.	ID=id2959;Dbxref=GeneID:1097838;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4A7.32
NC_003888.3	RefSeq	sequence_feature	2575903	2576715	.	+	.	ID=id2960;Dbxref=GeneID:1097838;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 57.00%2C E-value 4.2e-13;gbkey=misc_feature;gene=SC4A7.32
NC_003888.3	RefSeq	gene	2576928	2578505	.	+	.	ID=gene2407;Dbxref=GeneID:1097839;Name=SC4A7.33;gbkey=Gene;gene=SC4A7.33;gene_biotype=protein_coding;gene_synonym=SC4A7.33;locus_tag=SCO2405
NC_003888.3	RefSeq	CDS	2576928	2578505	.	+	0	ID=cds2368;Parent=gene2407;Dbxref=Genbank:NP_626651.1,GeneID:1097839;Name=NP_626651.1;Note=SC4A7.24%2C probable sugar-transport ATP binding protein%2C len: 513 aa%3B similar to TR:AAD45713 (EMBL:AF160811) Bacillus stearothermophilus L-arabinose transport%2C ATP binding protein AraG%2C 513 aa%3B fasta scores: opt: 2220 z-score: 2417.4 E(): 0%3B 65.5%25 identity in 510 aa overlap and to SW:ALSA_ECOLI (EMBL:U14003) Escherichia coli D-allose transport ATP-binding protein AlsA%2C 510 aa%3B fasta scores: opt: 1200 z-score: 1308.3 E(): 0%3B 40.7%25 identity in 514 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran%2C ABC transporter and two matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC4A7.33;product=sugar-transport ATP binding protein;protein_id=NP_626651.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2577018	2577584	.	+	.	ID=id2961;Dbxref=GeneID:1097839;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 174.10%2C E-value 2.3e-48;gbkey=misc_feature;gene=SC4A7.33
NC_003888.3	RefSeq	sequence_feature	2577039	2577062	.	+	.	ID=id2962;Dbxref=GeneID:1097839;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4A7.33
NC_003888.3	RefSeq	sequence_feature	2577807	2578391	.	+	.	ID=id2963;Dbxref=GeneID:1097839;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 88.40%2C E-value 1.5e-22;gbkey=misc_feature;gene=SC4A7.33
NC_003888.3	RefSeq	sequence_feature	2578164	2578208	.	+	.	ID=id2964;Dbxref=GeneID:1097839;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC4A7.33
NC_003888.3	RefSeq	ribosome_entry_site	2578491	2578494	.	+	.	ID=id2965;Dbxref=GeneID:1097839;gbkey=RBS;gene=SC4A7.33
NC_003888.3	RefSeq	gene	2578502	2579746	.	+	.	ID=gene2408;Dbxref=GeneID:1097840;Name=SC4A7.34;gbkey=Gene;gene=SC4A7.34;gene_biotype=protein_coding;gene_synonym=SC4A7.34;locus_tag=SCO2406
NC_003888.3	RefSeq	CDS	2578502	2579746	.	+	0	ID=cds2369;Parent=gene2408;Dbxref=Genbank:NP_626652.1,GeneID:1097840;Name=NP_626652.1;Note=SC4A7.34%2C probable sugar transport permease%2C len: 414 aa%3B similar to TR:AAD45714 (EMBL:AF160811) Bacillus stearothermophilus L-arabinose membrane permease AraH%2C 407 aa%3B fasta scores: opt: 1448 z-score: 1515.1 E(): 0%3B 56.9%25 identity in 385 aa overlap and to SW:XYLH_HAEIN (EMBL:U32791) Haemophilus influenzae xylose transport permease XylH%2C 375 aa%3B fasta scores: opt: 970 z-score: 1017.9 E(): 0%3B 42.6%25 identity in 376 aa overlap;gbkey=CDS;gene=SC4A7.34;product=sugar transport permease;protein_id=NP_626652.1;transl_table=11
NC_003888.3	RefSeq	gene	2579862	2580962	.	+	.	ID=gene2409;Dbxref=GeneID:1097841;Name=SC4A7.35;gbkey=Gene;gene=SC4A7.35;gene_biotype=protein_coding;gene_synonym=SC4A7.35;locus_tag=SCO2407
NC_003888.3	RefSeq	CDS	2579862	2580962	.	+	0	ID=cds2370;Parent=gene2409;Dbxref=Genbank:NP_626653.1,GeneID:1097841;Name=NP_626653.1;Note=SC4A7.35%2C probable aldose 1-epimerase%2C len: 366 aa%3B similar to SW:GALM_ACICA (EMBL:X03893) Acinetobacter calcoaceticus aldose 1-epimerase precursor (EC 5.1.3.3) Mro%2C 381 aa%3B fasta scores: opt: 1022 z-score: 1184.4 E(): 0%3B 44.3%25 identity in 350 aa overlap and to S. coelicolor SC4A7.21%2C 323 aa%3B fasta scores: opt: 838 z-score: 928.5 E(): 0%3B 54.2%25 identity in 347 aa overlap. Contains Pfam match to entry PF01263 Aldose_epim%2C Aldose 1-epimerase;gbkey=CDS;gene=SC4A7.35;product=aldose 1-epimerase;protein_id=NP_626653.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2579928	2580956	.	+	.	ID=id2966;Dbxref=GeneID:1097841;Note=Pfam match to entry PF01263 Aldose_epim%2C Aldose 1-epimerase%2C score 359.90%2C E-value 2.8e-104;gbkey=misc_feature;gene=SC4A7.35
NC_003888.3	RefSeq	ribosome_entry_site	2581070	2581074	.	+	.	ID=id2967;gbkey=RBS
NC_003888.3	RefSeq	gene	2581080	2582705	.	+	.	ID=gene2410;Dbxref=GeneID:1097842;Name=SC4A7.36;gbkey=Gene;gene=SC4A7.36;gene_biotype=protein_coding;gene_synonym=SC4A7.36;locus_tag=SCO2408
NC_003888.3	RefSeq	CDS	2581080	2582705	.	+	0	ID=cds2371;Parent=gene2410;Dbxref=Genbank:NP_626654.1,GeneID:1097842;Name=NP_626654.1;Note=SC4A7.36%2C possible aminotransferase%2C len: 541 aa%3B similar to SW:HIS8_METJA (EMBL:U67539) Methanococcus jannaschii probable histidinol-phosphate aminotransferase (EC 2.6.1.9) HisC%2C 373 aa%3B fasta scores: opt: 390 z-score: 299.5 E(): 2.6e-09%3B 25.1%25 identity in 334 aa overlap. Contains Pfam match to entry PF00222 aminotran_2%2C Aminotransferases class-II;gbkey=CDS;gene=SC4A7.36;product=aminotransferase;protein_id=NP_626654.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2581320	2582129	.	+	.	ID=id2968;Dbxref=GeneID:1097842;Note=Pfam match to entry PF00222 aminotran_2%2C Aminotransferases class-II%2C score 19.70%2C E-value 3.6e-08;gbkey=misc_feature;gene=SC4A7.36
NC_003888.3	RefSeq	gene	2582733	2583998	.	-	.	ID=gene2411;Dbxref=GeneID:1097843;Name=SC4A7.37c;gbkey=Gene;gene=SC4A7.37c;gene_biotype=protein_coding;gene_synonym=SC4A7.37c;locus_tag=SCO2409
NC_003888.3	RefSeq	CDS	2582733	2583998	.	-	0	ID=cds2372;Parent=gene2411;Dbxref=Genbank:NP_626655.1,GeneID:1097843;Name=NP_626655.1;Note=SC4A7.37c%2C possible hypothetical protein%2C len: 421 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB52057 (EMBL:AL109732) Streptomyces coelicolor hypothetical 61.4 kD protein SC7H2.15c%2C 597 aa%3B fasta scores: opt: 1148 z-score: 809.3 E(): 0%3B 51.3%25 identity in 388 aa overlap. Contains proline-rich region and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4A7.37c;product=hypothetical protein;protein_id=NP_626655.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2582751	2583041	.	-	.	ID=id2969;Dbxref=GeneID:1097843;Note=proline-rich region;gbkey=misc_feature;gene=SC4A7.37c
NC_003888.3	RefSeq	ribosome_entry_site	2584007	2584011	.	-	.	ID=id2970;gbkey=RBS
NC_003888.3	RefSeq	gene	2584078	2584839	.	-	.	ID=gene2412;Dbxref=GeneID:1097844;Name=SC4A7.38c;gbkey=Gene;gene=SC4A7.38c;gene_biotype=protein_coding;gene_synonym=SC4A7.38c;locus_tag=SCO2410
NC_003888.3	RefSeq	CDS	2584078	2584839	.	-	0	ID=cds2373;Parent=gene2412;Dbxref=Genbank:NP_626656.1,GeneID:1097844;Name=NP_626656.1;Note=SC4A7.38c%2C possible integral membrane protein%2C len: 253 aa%3B similar to various hypothetical proteins%2C e.g. TR:O07422 (EMBL:Z97050) Mycobacterium tuberculosis hypothetical 25.9 kD protein MTCI28.18%2C 244 aa%3B fasta scores: opt: 183 z-score: 204.4 E(): 0.00053%3B 31.0%25 identity in 171 aa overlap and to S. coelicolor SC4A7.40c%2C 219 aa%3B fasta scores: opt: 323 z-score: 280.2 E(): 3.2e-10%3B 40.5%25 identity in 200 aa overlap;gbkey=CDS;gene=SC4A7.38c;product=hypothetical protein;protein_id=NP_626656.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2584847	2584852	.	-	.	ID=id2971;gbkey=RBS
NC_003888.3	RefSeq	gene	2584886	2585440	.	-	.	ID=gene2413;Dbxref=GeneID:1097845;Name=SC4A7.39c;gbkey=Gene;gene=SC4A7.39c;gene_biotype=protein_coding;gene_synonym=SC4A7.39c;locus_tag=SCO2411
NC_003888.3	RefSeq	CDS	2584886	2585440	.	-	0	ID=cds2374;Parent=gene2413;Dbxref=Genbank:NP_626657.1,GeneID:1097845;Name=NP_626657.1;Note=SC4A7.39c%2C possible membrane protein%2C len: 184 aa%3B similar to various hypothetical proteins%2C e.g. SW:Y07R_MYCTU (EMBL:Z75555) Mycobacterium tuberculosis hypothetical 28.3 kD protein%2C 261 aa%3B fasta scores: opt: 188 z-score: 223.5 E(): 4.6e-05%3B 28.7%25 identity in 164 aa overlap and to S/ coelicolor SC4A7.41c%2C >165 aa%3B fasta scores: opt: 240 z-score: 255.3 E(): 7.9e-09%3B 36.0%25 identity in 161 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4A7.39c;product=hypothetical protein;protein_id=NP_626657.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2585447	2585450	.	-	.	ID=id2972;gbkey=RBS
NC_003888.3	RefSeq	gene	2585467	2586126	.	-	.	ID=gene2414;Dbxref=GeneID:1097846;Name=SC4A7.40c;gbkey=Gene;gene=SC4A7.40c;gene_biotype=protein_coding;gene_synonym=SC4A7.40c;locus_tag=SCO2412
NC_003888.3	RefSeq	CDS	2585467	2586126	.	-	0	ID=cds2375;Parent=gene2414;Dbxref=Genbank:NP_626658.1,GeneID:1097846;Name=NP_626658.1;Note=SC4A7.40c%2C possible membrane protein%2C len: 219 aa%3B similar to C-terminus of TR:P71415 (EMBL:U75438) Halobacterium salinarium transducer Htd protein%2C 777 aa%3B fasta scores: opt: 182 z-score: 198.8 E(): 0.0011%3B 30.6%25 identity in 193 aa overlap and to S. coelicolor SC4A7.38c%2C 253 aa%3B fasta scores: opt: 323 z-score: 286.8 E(): 1.4e-10%3B 40.5%25 identity in 200 aa overlap;gbkey=CDS;gene=SC4A7.40c;product=hypothetical protein;protein_id=NP_626658.1;transl_table=11
NC_003888.3	RefSeq	gene	2586123	2586635	.	-	.	ID=gene2415;Dbxref=GeneID:1097847;Name=SC4A7.41c;gbkey=Gene;gene=SC4A7.41c;gene_biotype=protein_coding;gene_synonym=SC4A7.41c,SC8A2.01c;locus_tag=SCO2413
NC_003888.3	RefSeq	CDS	2586123	2586635	.	-	0	ID=cds2376;Parent=gene2415;Dbxref=Genbank:NP_733569.1,GeneID:1097847;Name=NP_733569.1;Note=SC8A2.01c%2C possible hypothetical protein (fragment)%2C len: >42 aa. Contains possible N-terminal region signal peptide sequence~SC4A7.41c%2C possible membrane protein (partial CDS)%2C len: >165 aa%3B similar to various hypothetical proteins%2C e.g. TR:P71754 (EMBL:Z81368) Mycobacterium tuberculosis hypothetical 19.9 kD protein MCTY253.31%2C 185 aa%3B fasta scores: opt: 125 z-score: 158.3 E(): 0.2%3B 26.0%25 identity in 150 aa overlap and to S. coelicolor SC4A7.39c%2C 192 aa%3B fasta scores: opt: 240 z-score: 236.5 E(): 8.8e-08%3B 36.0%25 identity in 161 aa overlap;gbkey=CDS;gene=SC4A7.41c;product=hypothetical protein;protein_id=NP_733569.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2586131	2586134	.	-	.	ID=id2973;Dbxref=GeneID:1097847;gbkey=RBS;gene=SC4A7.41c
NC_003888.3	RefSeq	gene	2586632	2587933	.	-	.	ID=gene2416;Dbxref=GeneID:1097848;Name=SC8A2.02c;gbkey=Gene;gene=SC8A2.02c;gene_biotype=protein_coding;gene_synonym=SC8A2.02c;locus_tag=SCO2414
NC_003888.3	RefSeq	CDS	2586632	2587933	.	-	0	ID=cds2377;Parent=gene2416;Dbxref=Genbank:NP_626659.1,GeneID:1097848;Name=NP_626659.1;Note=SC8A2.02c%2C possible hypothetical protein%2C len: 433 aa%3B similar to TR:O53972 (EMBL:AL022073) Mycobacterium tuberculosis hypothetical 46.7 kDa protein MTV051.09%2C 437 aa%3B fasta scores: opt: 529 z-score: 488.9 E(): 1e-19%3B 31.3%25 identity in 438 aa overlap. Contains Pfam match to entry PF02470 mce. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A2.02c;product=hypothetical protein;protein_id=NP_626659.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2587472	2587906	.	-	.	ID=id2974;Dbxref=GeneID:1097848;Note=Pfam match to entry PF02470 mce%2C %2C score 98.10%2C E-value 1.8e-25;gbkey=misc_feature;gene=SC8A2.02c
NC_003888.3	RefSeq	gene	2587930	2589171	.	-	.	ID=gene2417;Dbxref=GeneID:1097849;Name=SC8A2.03c;gbkey=Gene;gene=SC8A2.03c;gene_biotype=protein_coding;gene_synonym=SC8A2.03c;locus_tag=SCO2415
NC_003888.3	RefSeq	CDS	2587930	2589171	.	-	0	ID=cds2378;Parent=gene2417;Dbxref=Genbank:NP_626660.1,GeneID:1097849;Name=NP_626660.1;Note=SC8A2.03c%2C possible hypothetical protein%2C len: 413 aa%3B similar to TR:O53971 (EMBL:AL022073) Mycobacterium tuberculosis hypothetical 40.2 kDa protein MTV051.08%2C 377 aa%3B fasta scores: opt: 685 z-score: 681.0 E(): 2.1e-30%3B 36.0%25 identity in 311 aa overlap. Contains Pfam match to entry PF02470 mce. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A2.03c;product=hypothetical protein;protein_id=NP_626660.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2587940	2587947	.	-	.	ID=id2975;Dbxref=GeneID:1097849;gbkey=RBS;gene=SC8A2.03c
NC_003888.3	RefSeq	sequence_feature	2588647	2589105	.	-	.	ID=id2976;Dbxref=GeneID:1097849;Note=Pfam match to entry PF02470 mce%2C %2C score 119.10%2C E-value 8.5e-32;gbkey=misc_feature;gene=SC8A2.03c
NC_003888.3	RefSeq	gene	2589168	2590181	.	-	.	ID=gene2418;Dbxref=GeneID:1097850;Name=SC8A2.04c;gbkey=Gene;gene=SC8A2.04c;gene_biotype=protein_coding;gene_synonym=SC8A2.04c;locus_tag=SCO2416
NC_003888.3	RefSeq	CDS	2589168	2590181	.	-	0	ID=cds2379;Parent=gene2418;Dbxref=Genbank:NP_626661.1,GeneID:1097850;Name=NP_626661.1;Note=SC8A2.04c%2C possible hypothetical protein%2C len: 337 aa%3B similar to TR:O53970 (EMBL:AL022073) Mycobacterium tuberculosis hypothetical 44.4 kDa protein MTV051.07%2C 423 aa%3B fasta scores: opt: 596 z-score: 625.4 E(): 2.6e-27%3B 33.1%25 identity in 320 aa overlap. Contains Pfam match to entry PF02470 mce. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A2.04c;product=hypothetical protein;protein_id=NP_626661.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2589176	2589180	.	-	.	ID=id2977;Dbxref=GeneID:1097850;gbkey=RBS;gene=SC8A2.04c
NC_003888.3	RefSeq	sequence_feature	2589747	2590163	.	-	.	ID=id2978;Dbxref=GeneID:1097850;Note=Pfam match to entry PF02470 mce%2C %2C score 103.70%2C E-value 3.6e-27;gbkey=misc_feature;gene=SC8A2.04c
NC_003888.3	RefSeq	gene	2590178	2591233	.	-	.	ID=gene2419;Dbxref=GeneID:1097851;Name=SC8A2.05c;gbkey=Gene;gene=SC8A2.05c;gene_biotype=protein_coding;gene_synonym=SC8A2.05c;locus_tag=SCO2417
NC_003888.3	RefSeq	CDS	2590178	2591233	.	-	0	ID=cds2380;Parent=gene2419;Dbxref=Genbank:NP_626662.1,GeneID:1097851;Name=NP_626662.1;Note=SC8A2.05c%2C possible hypothetical protein%2C len: 351 aa%3B similar to TR:O53969 (EMBL:AL022073) Mycobacterium tuberculosis hypothetical 43.7 kDa protein MTV051.06%2C 410 aa%3B fasta scores: opt: 683 z-score: 769.5 E(): 0%3B 33.4%25 identity in 368 aa overlap. Contains Pfam match to entry PF02470 mce. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A2.05c;product=hypothetical protein;protein_id=NP_626662.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2590191	2590194	.	-	.	ID=id2979;Dbxref=GeneID:1097851;gbkey=RBS;gene=SC8A2.05c
NC_003888.3	RefSeq	sequence_feature	2590763	2591179	.	-	.	ID=id2980;Dbxref=GeneID:1097851;Note=Pfam match to entry PF02470 mce%2C %2C score 112.80%2C E-value 6.7e-30;gbkey=misc_feature;gene=SC8A2.05c
NC_003888.3	RefSeq	gene	2591230	2592294	.	-	.	ID=gene2420;Dbxref=GeneID:1097852;Name=SC8A2.06c;gbkey=Gene;gene=SC8A2.06c;gene_biotype=protein_coding;gene_synonym=SC8A2.06c;locus_tag=SCO2418
NC_003888.3	RefSeq	CDS	2591230	2592294	.	-	0	ID=cds2381;Parent=gene2420;Dbxref=Genbank:NP_626663.1,GeneID:1097852;Name=NP_626663.1;Note=SC8A2.06c%2C possible hypothetical protein%2C len: 354 aa%3B similar to TR:O53968 (EMBL:AL022073) Mycobacterium tuberculosis hypothetical 36.5 kDa protein MTV051.05%2C 342 aa%3B fasta scores: opt: 665 z-score: 735.0 E(): 0%3B 37.6%25 identity in 343 aa overlap. Contains Pfam match to entry PF02470 mce. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A2.06c;product=hypothetical protein;protein_id=NP_626663.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2591240	2591245	.	-	.	ID=id2981;Dbxref=GeneID:1097852;gbkey=RBS;gene=SC8A2.06c
NC_003888.3	RefSeq	sequence_feature	2591800	2592231	.	-	.	ID=id2982;Dbxref=GeneID:1097852;Note=Pfam match to entry PF02470 mce%2C %2C score 104.10%2C E-value 2.8e-27;gbkey=misc_feature;gene=SC8A2.06c
NC_003888.3	RefSeq	gene	2592291	2593547	.	-	.	ID=gene2421;Dbxref=GeneID:1097853;Name=SC8A2.07c;gbkey=Gene;gene=SC8A2.07c;gene_biotype=protein_coding;gene_synonym=SC8A2.07c;locus_tag=SCO2419
NC_003888.3	RefSeq	CDS	2592291	2593547	.	-	0	ID=cds2382;Parent=gene2421;Dbxref=Genbank:NP_626664.1,GeneID:1097853;Name=NP_626664.1;Note=SC8A2.07c%2C possible hypothetical protein%2C len: 418 aa%3B similar to TR:O53967 (EMBL:AL022073) Mycobacterium tuberculosis mce-family protein MTV051.04%2C 425 aa%3B fasta scores: opt: 548 z-score: 564.7 E(): 6.2e-24%3B 33.0%25 identity in 367 aa overlap. Contains Pfam match to entry PF02470 mce. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A2.07c;product=hypothetical protein;protein_id=NP_626664.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2592302	2592309	.	-	.	ID=id2983;Dbxref=GeneID:1097853;gbkey=RBS;gene=SC8A2.07c
NC_003888.3	RefSeq	sequence_feature	2593077	2593511	.	-	.	ID=id2984;Dbxref=GeneID:1097853;Note=Pfam match to entry PF02470 mce%2C %2C score 97.80%2C E-value 2.2e-25;gbkey=misc_feature;gene=SC8A2.07c
NC_003888.3	RefSeq	gene	2593549	2594355	.	-	.	ID=gene2422;Dbxref=GeneID:1097854;Name=SC8A2.08c;gbkey=Gene;gene=SC8A2.08c;gene_biotype=protein_coding;gene_synonym=SC8A2.08c,SCC42.01c;locus_tag=SCO2420
NC_003888.3	RefSeq	CDS	2593549	2594355	.	-	0	ID=cds2383;Parent=gene2422;Dbxref=Genbank:NP_733570.1,GeneID:1097854;Name=NP_733570.1;Note=SCC42.01c%2C possible ABC-transporter integral membrane protein (fragment)%2C len: >161 aa%3B similar to TR:O53545 (EMBL:AL022022) Mycobacterium tuberculosis hypothetical 29.6 kD protein MTV023.07c%2C 280 aa%3B fasta scores: opt: 565 z-score: 630.0 E(): 1.3e-27%3B 54.5%25 identity in 154 aa overlap. Contains possible hydrophobic membrane spanning regions~SC8A2.08c%2C conserved hypothetical protein (fragment)%2C len: >139 aa%3B similar to TR:O53966 (EMBL:AL022073) Mycobacterium tuberculosis hypothetical 28.1 kDa protein MTV051.03%2C 271 aa%3B fasta scores: opt: 474 z-score: 595.0 E(): 1.3e-25%3B 48.6%25 identity in 138 aa overlap;gbkey=CDS;gene=SC8A2.08c;product=ABC-transporter integral membrane protein;protein_id=NP_733570.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2594360	2594363	.	-	.	ID=id2985;gbkey=RBS
NC_003888.3	RefSeq	gene	2594362	2595126	.	-	.	ID=gene2423;Dbxref=GeneID:1097855;Name=SCC42.02c;gbkey=Gene;gene=SCC42.02c;gene_biotype=protein_coding;gene_synonym=SCC42.02c;locus_tag=SCO2421
NC_003888.3	RefSeq	CDS	2594362	2595126	.	-	0	ID=cds2384;Parent=gene2423;Dbxref=Genbank:NP_626665.1,GeneID:1097855;Name=NP_626665.1;Note=SCC42.02c%2C possible ABC-transporter integral membrane protein%2C len: 254 aa%3B similar to TR:O53546 (EMBL:AL022022) Mycobacterium tuberculosis hypothetical 26.6 kD protein MTV023.08c%2C 254 aa%3B fasta scores: opt: 881 z-score: 1004.0 E(): 0%3B 50.8%25 identity in 242 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC42.02c;product=ABC-transporter integral membrane protein;protein_id=NP_626665.1;transl_table=11
NC_003888.3	RefSeq	gene	2595123	2596154	.	-	.	ID=gene2424;Dbxref=GeneID:1097856;Name=SCC42.03c;gbkey=Gene;gene=SCC42.03c;gene_biotype=protein_coding;gene_synonym=SCC42.03c;locus_tag=SCO2422
NC_003888.3	RefSeq	CDS	2595123	2596154	.	-	0	ID=cds2385;Parent=gene2424;Dbxref=Genbank:NP_626666.1,GeneID:1097856;Name=NP_626666.1;Note=SCC42.03c%2C possible ABC-transporter ATP-binding protein%2C len: 343 aa%3B similar to SW:YRBF_HAEIN (EMBL:U32788) Haemophilus influenzae hypothetical ABC-transporter ATP-binding protein HI1087%2C 264 aa%3B fasta scores: opt: 680 z-score: 686.6 E(): 8.9e-31%3B 41.4%25 identity in 244 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCC42.03c;product=ABC transporter ATP-binding protein;protein_id=NP_626666.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2595133	2595136	.	-	.	ID=id2986;Dbxref=GeneID:1097856;gbkey=RBS;gene=SCC42.03c
NC_003888.3	RefSeq	sequence_feature	2595489	2596046	.	-	.	ID=id2987;Dbxref=GeneID:1097856;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 152.90%2C E-value 5.4e-42;gbkey=misc_feature;gene=SCC42.03c
NC_003888.3	RefSeq	sequence_feature	2595669	2595713	.	-	.	ID=id2988;Dbxref=GeneID:1097856;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCC42.03c
NC_003888.3	RefSeq	sequence_feature	2596002	2596025	.	-	.	ID=id2989;Dbxref=GeneID:1097856;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC42.03c
NC_003888.3	RefSeq	ribosome_entry_site	2596773	2596778	.	+	.	ID=id2990;gbkey=RBS
NC_003888.3	RefSeq	gene	2596787	2597419	.	+	.	ID=gene2425;Dbxref=GeneID:1097857;Name=SCC42.04;gbkey=Gene;gene=SCC42.04;gene_biotype=protein_coding;gene_synonym=SCC42.04;locus_tag=SCO2423
NC_003888.3	RefSeq	CDS	2596787	2597419	.	+	0	ID=cds2386;Parent=gene2425;Dbxref=Genbank:NP_626667.1,GeneID:1097857;Name=NP_626667.1;Note=SCC42.04%2C possible hypothetical protein%2C len: 210 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC42.04;product=hypothetical protein;protein_id=NP_626667.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2597548	2597551	.	+	.	ID=id2991;gbkey=RBS
NC_003888.3	RefSeq	gene	2597556	2599157	.	+	.	ID=gene2426;Dbxref=GeneID:1097858;Name=SCC42.05;gbkey=Gene;gene=SCC42.05;gene_biotype=protein_coding;gene_synonym=SCC42.05;locus_tag=SCO2424
NC_003888.3	RefSeq	CDS	2597556	2599157	.	+	0	ID=cds2387;Parent=gene2426;Dbxref=Genbank:NP_626668.1,GeneID:1097858;Name=NP_626668.1;Note=SCC42.05%2C possible hypothetical protein%2C len: 533 aa. Contains possible N-terminal region signal peptide sequence. High content in alanine amino acid residues;gbkey=CDS;gene=SCC42.05;product=hypothetical protein;protein_id=NP_626668.1;transl_table=11
NC_003888.3	RefSeq	gene	2599192	2600133	.	+	.	ID=gene2427;Dbxref=GeneID:1097859;Name=SCC42.06;gbkey=Gene;gene=SCC42.06;gene_biotype=protein_coding;gene_synonym=SCC42.06;locus_tag=SCO2425
NC_003888.3	RefSeq	CDS	2599192	2600133	.	+	0	ID=cds2388;Parent=gene2427;Dbxref=Genbank:NP_626669.1,GeneID:1097859;Name=NP_626669.1;Note=SCC42.06%2C possible hypothetical protein%2C len: 313 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC42.06;product=hypothetical protein;protein_id=NP_626669.1;transl_table=11
NC_003888.3	RefSeq	gene	2600318	2601529	.	+	.	ID=gene2428;Dbxref=GeneID:1097860;Name=SCC42.07;gbkey=Gene;gene=SCC42.07;gene_biotype=protein_coding;gene_synonym=SCC42.07;locus_tag=SCO2426
NC_003888.3	RefSeq	CDS	2600318	2601529	.	+	0	ID=cds2389;Parent=gene2428;Dbxref=Genbank:NP_626670.1,GeneID:1097860;Name=NP_626670.1;Note=SCC42.07%2C possible regulatory protein%2C len: 403 aa%3B similar to TR:CAB88166 (EMBL:AL352956) Streptomyces coelicolor  regulatory protein SC1H10.22c%2C 555 aa%3B fasta scores: opt: 157 z-score: 183.8 E(): 0.0091%3B 26.8%25 identity in 447 aa overlap. Contains a possible helix-turn-helix motif at residues 347..863 (+3.80 SD) and two TTA leucine codons (codon 170 and codon 174)%2C possible targets for bldA regulation;gbkey=CDS;gene=SCC42.07;product=regulatory protein;protein_id=NP_626670.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2600825	2600827	.	+	.	ID=id2992;Dbxref=GeneID:1097860;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCC42.07
NC_003888.3	RefSeq	sequence_feature	2600837	2600839	.	+	.	ID=id2993;Dbxref=GeneID:1097860;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCC42.07
NC_003888.3	RefSeq	gene	2601569	2602537	.	-	.	ID=gene2429;Dbxref=GeneID:1097861;Name=SCC42.08c;gbkey=Gene;gene=SCC42.08c;gene_biotype=protein_coding;gene_synonym=SCC42.08c;locus_tag=SCO2427
NC_003888.3	RefSeq	CDS	2601569	2602537	.	-	0	ID=cds2390;Parent=gene2429;Dbxref=Genbank:NP_626671.1,GeneID:1097861;Name=NP_626671.1;Note=SCC42.08c%2C probable  arabinase%2C len: 322 aa%3B similar to SW:ABNA_ASPNG (EMBL:L23430) Aspergillus niger arabinan endo-1%2C5-alpha-L-arabinosidase A precursor (EC 3.2.1.99) AbnA%2C 321 aa%3B fasta scores: opt: 764 z-score: 832.4 E(): 0%3B 42.0%25 identity in 326 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC42.08c;product=arabinase;protein_id=NP_626671.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2602544	2602547	.	-	.	ID=id2994;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2602869	2602872	.	+	.	ID=id2995;gbkey=RBS
NC_003888.3	RefSeq	gene	2602879	2604447	.	+	.	ID=gene2430;Dbxref=GeneID:1097862;Name=SCC42.09;gbkey=Gene;gene=SCC42.09;gene_biotype=protein_coding;gene_synonym=SCC42.09;locus_tag=SCO2428
NC_003888.3	RefSeq	CDS	2602879	2604447	.	+	0	ID=cds2391;Parent=gene2430;Dbxref=Genbank:NP_626672.1,GeneID:1097862;Name=NP_626672.1;Note=SCC42.09%2C possible phosphate binding protein ( hypothetical protein)%2C len: 522 aa%3B C-terminal domain similar to TR:Q9Z9M3 (EMBL:AB017492) Pseudomonas aeruginosa phosphate binding protein PtpS%2C 323 aa%3B fasta scores: opt: 226 z-score: 266.2 E(): 2.3e-07%3B 25.3%25 identity in 328 aa overlap. Contains Pfam match to entry PF01449 PstS%2C Phosphate-binding protein and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC42.09;product=phosphate binding protein;protein_id=NP_626672.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2603572	2604393	.	+	.	ID=id2996;Dbxref=GeneID:1097862;Note=Pfam match to entry PF01449 PstS%2C Phosphate-binding protein%2C score -10.10%2C E-value 7.2e-06;gbkey=misc_feature;gene=SCC42.09
NC_003888.3	RefSeq	gene	2604477	2605133	.	-	.	ID=gene2431;Dbxref=GeneID:1097863;Name=SCC42.10c;gbkey=Gene;gene=SCC42.10c;gene_biotype=protein_coding;gene_synonym=SCC42.10c;locus_tag=SCO2429
NC_003888.3	RefSeq	CDS	2604477	2605133	.	-	0	ID=cds2392;Parent=gene2431;Dbxref=Genbank:NP_626673.1,GeneID:1097863;Name=NP_626673.1;Note=SCC42.10c%2C possible hypothetical protein%2C len: 218 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC42.10c;product=hypothetical protein;protein_id=NP_626673.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2605137	2605141	.	-	.	ID=id2997;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2605540	2605544	.	+	.	ID=id2998;gbkey=RBS
NC_003888.3	RefSeq	gene	2605550	2608351	.	+	.	ID=gene2432;Dbxref=GeneID:1097864;Name=SCC24.01;gbkey=Gene;gene=SCC24.01;gene_biotype=protein_coding;gene_synonym=SCC24.01,SCC42.11;locus_tag=SCO2430
NC_003888.3	RefSeq	CDS	2605550	2608351	.	+	0	ID=cds2393;Parent=gene2432;Dbxref=Genbank:NP_733571.1,GeneID:1097864;Name=NP_733571.1;Note=SCC24.01%2C possible sugar hydrolase (fragment) ( hypothetical protein)%2C len: >407 aa%3B similar to C-terminal region of SW:BGAL_ASPNG (EMBL:L06037) Aspergillus niger beta galactosidase precursor (EC 3.2.1.23) LacA%2C 1006 aa%3B fasta scores: opt: 214 z-score: 223.7 E(): 5e-05%3B 27.1%25 identity in 321 aa overlap~SCC42.11%2C probable  beta-galactosidase (fragment)%2C len: >555 aa%3B similar to SW:BGAL_ASPNG (EMBL:L06037) Aspergillus niger beta-galactosidase precursor (EC 3.2.1.23) LacA%2C 1006 aa%3B fasta scores: opt: 413 z-score: 403.4 E(): 5.4e-15%3B 24.3%25 identity in 608 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC24.01;product=beta-galactosidase;protein_id=NP_733571.1;transl_table=11
NC_003888.3	RefSeq	gene	2608364	2609869	.	-	.	ID=gene2433;Dbxref=GeneID:1097865;Name=abfA;gbkey=Gene;gene=abfA;gene_biotype=protein_coding;gene_synonym=abfA,SCC24.02c;locus_tag=SCO2431
NC_003888.3	RefSeq	CDS	2608364	2609869	.	-	0	ID=cds2394;Parent=gene2433;Dbxref=Genbank:NP_626674.1,GeneID:1097865;Name=NP_626674.1;Note=SCC24.02c%2C abfA%2C alpha-L-arabinofuranosidase%2C len: 501 aa%3B almost identical to SW:ABFA_STRLI (EMBL:U04630) Streptomyces lividans alpha-L-arabinofuranosidase (EC 3.2.1.55) AbfA%2C 662 aa;gbkey=CDS;gene=abfA;product=alpha-L-arabinofuranosidase;protein_id=NP_626674.1;transl_table=11
NC_003888.3	RefSeq	gene	2609897	2610760	.	-	.	ID=gene2434;Dbxref=GeneID:1097866;Name=SCC24.03c;gbkey=Gene;gene=SCC24.03c;gene_biotype=protein_coding;gene_synonym=SCC24.03c;locus_tag=SCO2432
NC_003888.3	RefSeq	CDS	2609897	2610760	.	-	0	ID=cds2395;Parent=gene2434;Dbxref=Genbank:NP_626675.1,GeneID:1097866;Name=NP_626675.1;Note=SCC24.03c%2C possible sugar transporter membrane protein%2C len: 287 aa%3B similar to TR:CAB59597 (EMBL:AL132662) Streptomyces coelicolor probable sugar transport inner membrane protein SCF11.20%2C 299 aa%3B fasta scores: opt: 673 z-score: 788.9 E(): 0%3B 35.3%25 identity in 278 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC24.03c;product=sugar transporter membrane protein;protein_id=NP_626675.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2610029	2610253	.	-	.	ID=id2999;Dbxref=GeneID:1097866;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 81.20%2C E-value 2.2e-20;gbkey=misc_feature;gene=SCC24.03c
NC_003888.3	RefSeq	sequence_feature	2610164	2610250	.	-	.	ID=id3000;Dbxref=GeneID:1097866;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCC24.03c
NC_003888.3	RefSeq	gene	2610757	2611698	.	-	.	ID=gene2435;Dbxref=GeneID:1097867;Name=SCC24.04c;gbkey=Gene;gene=SCC24.04c;gene_biotype=protein_coding;gene_synonym=SCC24.04c;locus_tag=SCO2433
NC_003888.3	RefSeq	CDS	2610757	2611698	.	-	0	ID=cds2396;Parent=gene2435;Dbxref=Genbank:NP_626676.1,GeneID:1097867;Name=NP_626676.1;Note=SCC24.04c%2C possible sugar transporter membrane protein%2C len: 313 aa%3B similar to TR: CAB59596(EMBL:AL132662) Streptomyces coelicolor probable sugar transporter inner membrane protein SCF11.19%2C 316 aa%3B fasta scores: opt: 533 z-score: 637.4 E(): 4.5e-28%3B 36.2%25 identity in 304 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC24.04c;product=sugar transporter membrane protein;protein_id=NP_626676.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2610768	2610774	.	-	.	ID=id3001;Dbxref=GeneID:1097867;gbkey=RBS;gene=SCC24.04c
NC_003888.3	RefSeq	sequence_feature	2610886	2611113	.	-	.	ID=id3002;Dbxref=GeneID:1097867;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 39.00%2C E-value 1.1e-07;gbkey=misc_feature;gene=SCC24.04c
NC_003888.3	RefSeq	sequence_feature	2611024	2611110	.	-	.	ID=id3003;Dbxref=GeneID:1097867;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCC24.04c
NC_003888.3	RefSeq	gene	2611695	2613053	.	-	.	ID=gene2436;Dbxref=GeneID:1097868;Name=SCC24.05c;gbkey=Gene;gene=SCC24.05c;gene_biotype=protein_coding;gene_synonym=SCC24.05c;locus_tag=SCO2434
NC_003888.3	RefSeq	CDS	2611695	2613053	.	-	0	ID=cds2397;Parent=gene2436;Dbxref=Genbank:NP_626677.1,GeneID:1097868;Name=NP_626677.1;Note=SCC24.05c%2C possible sugar transporter sugar binding protein%2C len: 452 aa%3B similar to TR:CAB59595 (EMBL:AL132662) Streptomyces coelicolor%2C probable sugar transporter sugar binding lipoprotein SCF11.18%2C 442 aa%3B fasta scores: opt: 274 z-score: 320.2 E(): 2.1e-10%3B 23.3%25 identity in 443 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCC24.05c;product=sugar transporter sugar binding protein;protein_id=NP_626677.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2611708	2611712	.	-	.	ID=id3004;Dbxref=GeneID:1097868;gbkey=RBS;gene=SCC24.05c
NC_003888.3	RefSeq	sequence_feature	2612130	2612615	.	-	.	ID=id3005;Dbxref=GeneID:1097868;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 51.50%2C E-value 1.9e-13;gbkey=misc_feature;gene=SCC24.05c
NC_003888.3	RefSeq	ribosome_entry_site	2613312	2613316	.	+	.	ID=id3006;gbkey=RBS
NC_003888.3	RefSeq	gene	2613322	2613849	.	+	.	ID=gene2437;Dbxref=GeneID:1097869;Name=SCC24.06;gbkey=Gene;gene=SCC24.06;gene_biotype=protein_coding;gene_synonym=SCC24.06;locus_tag=SCO2435
NC_003888.3	RefSeq	CDS	2613322	2613849	.	+	0	ID=cds2398;Parent=gene2437;Dbxref=Genbank:NP_626678.1,GeneID:1097869;Name=NP_626678.1;Note=SCC24.06%2C unknown%2C len: 175 aa%3B similar to TR:Q9F1V4 (EMBL:AB041825) Streptomyces ambofaciens ORF1 (genes for calcium binding) hypothetical protein%2C 131 aa%3B fasta scores: opt: 452 Z-score: 555.1 E(): 2.8e-23%3B 64.655%25 identity in 116 aa overlap;gbkey=CDS;gene=SCC24.06;product=hypothetical protein;protein_id=NP_626678.1;transl_table=11
NC_003888.3	RefSeq	gene	2613846	2615030	.	+	.	ID=gene2438;Dbxref=GeneID:1097870;Name=SCC24.07;gbkey=Gene;gene=SCC24.07;gene_biotype=protein_coding;gene_synonym=SCC24.07;locus_tag=SCO2436
NC_003888.3	RefSeq	CDS	2613846	2615030	.	+	0	ID=cds2399;Parent=gene2438;Dbxref=Genbank:NP_626679.1,GeneID:1097870;Name=NP_626679.1;Note=SCC24.07%2C possible integral membrane protein%2C len: 394 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC24.07;product=hypothetical protein;protein_id=NP_626679.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2615111	2615115	.	+	.	ID=id3007;gbkey=RBS
NC_003888.3	RefSeq	gene	2615125	2616336	.	+	.	ID=gene2439;Dbxref=GeneID:1097871;Name=SCC24.08;gbkey=Gene;gene=SCC24.08;gene_biotype=protein_coding;gene_synonym=SCC24.08;locus_tag=SCO2437
NC_003888.3	RefSeq	CDS	2615125	2616336	.	+	0	ID=cds2400;Parent=gene2439;Dbxref=Genbank:NP_626680.1,GeneID:1097871;Name=NP_626680.1;Note=SCC24.08%2C possible integral membrane protein%2C len: 403 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC24.08;product=hypothetical protein;protein_id=NP_626680.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2616316	2616321	.	+	.	ID=id3008;Dbxref=GeneID:1097871;gbkey=RBS;gene=SCC24.08
NC_003888.3	RefSeq	gene	2616326	2617732	.	+	.	ID=gene2440;Dbxref=GeneID:1097872;Name=SCC24.09;gbkey=Gene;gene=SCC24.09;gene_biotype=protein_coding;gene_synonym=SCC24.09;locus_tag=SCO2438
NC_003888.3	RefSeq	CDS	2616326	2617732	.	+	0	ID=cds2401;Parent=gene2440;Dbxref=Genbank:NP_626681.1,GeneID:1097872;Name=NP_626681.1;Note=SCC24.09%2C possible hypothetical protein%2C len: 468 aa%3B similar to various hypothetical proteins%2C e.g. TR:O86550 (EMBL:AL031350) Streptomyces coelicolor hypothetical 50.7 kD protein SC1F2.13c%2C 476 aa%3B fasta scores: opt: 931 z-score: 995.7 E(): 0%3B 43.2%25 identity in 458 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC24.09;product=hypothetical protein;protein_id=NP_626681.1;transl_table=11
NC_003888.3	RefSeq	gene	2617790	2618650	.	-	.	ID=gene2441;Dbxref=GeneID:1097873;Name=SCC24.10c;gbkey=Gene;gene=SCC24.10c;gene_biotype=protein_coding;gene_synonym=SCC24.10c;locus_tag=SCO2439
NC_003888.3	RefSeq	CDS	2617790	2618650	.	-	0	ID=cds2402;Parent=gene2441;Dbxref=Genbank:NP_626682.1,GeneID:1097873;Name=NP_626682.1;Note=SCC24.10c%2C possible calcium-binding protein%2C len: 286 aa%3B similar to TR:BAA90694 (EMBL:AB037936) Xenopus laevis regucalcin%2C 299 aa%3B fasta scores: opt: 449 z-score: 514.7 E(): 3.1e-21%3B 33.8%25 identity in 293 aa overlap;gbkey=CDS;gene=SCC24.10c;product=calcium-binding protein;protein_id=NP_626682.1;transl_table=11
NC_003888.3	RefSeq	gene	2618647	2619420	.	-	.	ID=gene2442;Dbxref=GeneID:1097874;Name=SCC24.11c;gbkey=Gene;gene=SCC24.11c;gene_biotype=protein_coding;gene_synonym=SCC24.11c;locus_tag=SCO2440
NC_003888.3	RefSeq	CDS	2618647	2619420	.	-	0	ID=cds2403;Parent=gene2442;Dbxref=Genbank:NP_626683.1,GeneID:1097874;Name=NP_626683.1;Note=SCC24.11c%2C probable transcriptional regulator%2C len: 257 aa%3B similar to SW:KDGR_ECOLI (EMBL:AE000277) Escherichia coli transcriptional regulator KdgR%2C 263 aa%3B fasta scores: opt: 446 z-score: 510.4 E(): 5.4e-21%3B 32.1%25 identity in 249 aa overlap. Contains Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator;gbkey=CDS;gene=SCC24.11c;product=transcriptional regulator;protein_id=NP_626683.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2618657	2618661	.	-	.	ID=id3009;Dbxref=GeneID:1097874;gbkey=RBS;gene=SCC24.11c
NC_003888.3	RefSeq	sequence_feature	2618671	2619231	.	-	.	ID=id3010;Dbxref=GeneID:1097874;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 190.70%2C E-value 2.4e-53;gbkey=misc_feature;gene=SCC24.11c
NC_003888.3	RefSeq	ribosome_entry_site	2619430	2619434	.	-	.	ID=id3011;gbkey=RBS
NC_003888.3	RefSeq	gene	2619547	2620149	.	+	.	ID=gene2443;Dbxref=GeneID:1097875;Name=SCC24.12;gbkey=Gene;gene=SCC24.12;gene_biotype=protein_coding;gene_synonym=SCC24.12;locus_tag=SCO2441
NC_003888.3	RefSeq	CDS	2619547	2620149	.	+	0	ID=cds2404;Parent=gene2443;Dbxref=Genbank:NP_626684.1,GeneID:1097875;Name=NP_626684.1;Note=SCC24.12%2C unknown%2C len: 200 aa. High content in alanine and arginine residues;gbkey=CDS;gene=SCC24.12;product=hypothetical protein;protein_id=NP_626684.1;transl_table=11
NC_003888.3	RefSeq	gene	2620174	2620881	.	-	.	ID=gene2444;Dbxref=GeneID:1097876;Name=SCC24.13c;gbkey=Gene;gene=SCC24.13c;gene_biotype=protein_coding;gene_synonym=SCC24.13c;locus_tag=SCO2442
NC_003888.3	RefSeq	CDS	2620174	2620881	.	-	0	ID=cds2405;Parent=gene2444;Dbxref=Genbank:NP_626685.1,GeneID:1097876;Name=NP_626685.1;Note=SCC24.13c%2C probable gntR-family transcriptional regulator%2C len: 235 aa%3B similar to SW:UXUR_ECOLI (EMBL:U14003) Escherichia coli%2C Uxu operon transcriptional regulator UxuR%2C 257 aa%3B fasta scores: opt: 338 z-score: 385.5 E(): 4.9e-14%3B 32.6%25 identity in 236 aa overlap and to TR:CAB6127 (EMBL:AL132991) Streptomyces coelicolor transcriptional regulator SCF55.06%2C 253 aa%3B fasta scores: opt: 380 z-score: 432.1 E(): 1.2e-16%3B 33.1%25 identity in 236 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and match ot Prosite entry S00043 Bacterial regulatory proteins%2C gntR family signature and possible helix-turn-helix motif at residues 37..58 (+3.83 SD);gbkey=CDS;gene=SCC24.13c;product=GntR family transcriptional regulator;protein_id=NP_626685.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2620654	2620833	.	-	.	ID=id3012;Dbxref=GeneID:1097876;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 82.80%2C E-value 4.9e-24;gbkey=misc_feature;gene=SCC24.13c
NC_003888.3	RefSeq	sequence_feature	2620702	2620776	.	-	.	ID=id3013;Dbxref=GeneID:1097876;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCC24.13c
NC_003888.3	RefSeq	ribosome_entry_site	2620891	2620896	.	-	.	ID=id3014;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	2620932	2621040	.	+	.	ID=id3015;Note=13806 GTGGCCGAGTGGCTGAGCCAATTGT 13830-13890 ACAAGTGGCTCAGCCACTCGGCCAC 13914. 24/25 (96%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	2621080	2621083	.	+	.	ID=id3016;gbkey=RBS
NC_003888.3	RefSeq	gene	2621091	2622488	.	+	.	ID=gene2445;Dbxref=GeneID:1097877;Name=SCC24.14;gbkey=Gene;gene=SCC24.14;gene_biotype=protein_coding;gene_synonym=SCC24.14;locus_tag=SCO2443
NC_003888.3	RefSeq	CDS	2621091	2622488	.	+	0	ID=cds2406;Parent=gene2445;Dbxref=Genbank:NP_626686.1,GeneID:1097877;Name=NP_626686.1;Note=SCC24.14%2C probable carrier protein (membrane protein)%2C len: 465 aa%3B similar to TR:Q9ZIP4 (EMBL:AF022387) Rhizobium trifolii dicarboxylate carrier protein gene MatC%2C 448 aa%3B fasta scores: opt: 827 z-score: 814.6 E(): 0%3B 51.0%25 identity in 465 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC24.14;product=hypothetical protein;protein_id=NP_626686.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2621745	2621804	.	+	.	ID=id3017;Dbxref=GeneID:1097877;Note=degenerate repeat 10x (G/T/D)(T/S/G);gbkey=repeat_region;gene=SCC24.14
NC_003888.3	RefSeq	ribosome_entry_site	2622564	2622567	.	+	.	ID=id3018;gbkey=RBS
NC_003888.3	RefSeq	gene	2622576	2624033	.	+	.	ID=gene2446;Dbxref=GeneID:1097878;Name=SCC24.15;gbkey=Gene;gene=SCC24.15;gene_biotype=protein_coding;gene_synonym=SCC24.15;locus_tag=SCO2444
NC_003888.3	RefSeq	CDS	2622576	2624033	.	+	0	ID=cds2407;Parent=gene2446;Dbxref=Genbank:NP_626687.1,GeneID:1097878;Name=NP_626687.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;gene=SCC24.15;product=acyl-CoA synthetase;protein_id=NP_626687.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2622663	2623823	.	+	.	ID=id3019;Dbxref=GeneID:1097878;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 144.50%2C E-value 1.9e-39;gbkey=misc_feature;gene=SCC24.15
NC_003888.3	RefSeq	sequence_feature	2622993	2623028	.	+	.	ID=id3020;Dbxref=GeneID:1097878;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SCC24.15
NC_003888.3	RefSeq	gene	2624026	2625402	.	+	.	ID=gene2447;Dbxref=GeneID:1097879;Name=SCC24.16;gbkey=Gene;gene=SCC24.16;gene_biotype=protein_coding;gene_synonym=SCC24.16;locus_tag=SCO2445
NC_003888.3	RefSeq	CDS	2624026	2625402	.	+	0	ID=cds2408;Parent=gene2447;Dbxref=Genbank:NP_626688.1,GeneID:1097879;Name=NP_626688.1;Note=SCC24.16%2C probable acetyl CoA carboxylase (alpha and beta subunits)%2C len: 458 aa%3B N-terminal region similar to SW:ACCD_ECOLI (EMBL:M32445) Escherichia coli acetyl-Coenzyme A carboxylase carboxyl transferase subunit beta (EC 6.4.1.2) AccD%2C 304 aa%3B fasta scores: opt: 368 z-score: 366.2 E(): 5.8e-13%3B 32.4%25 identity in 238 aa overlap and C-terminal region similar to TR:AAF10787 (EMBL:AE001970) Deinococcus radiodurans acetyl-CoA carboxylase carboxyl transferase alpha subunit DR1214%2C 316 aa%3B fasta scores: opt: 366 z-score: 364.0 E(): 7.7e-13%3B 39.9%25 identity in 223 aa overlap;gbkey=CDS;gene=SCC24.16;product=acetyl CoA carboxylase subunits alpha/beta;protein_id=NP_626688.1;transl_table=11
NC_003888.3	RefSeq	gene	2625671	2629333	.	-	.	ID=gene2448;Dbxref=GeneID:1097880;Name=SCC24.17c;gbkey=Gene;gene=SCC24.17c;gene_biotype=protein_coding;gene_synonym=SCC24.17c;locus_tag=SCO2446
NC_003888.3	RefSeq	CDS	2625671	2629333	.	-	0	ID=cds2409;Parent=gene2448;Dbxref=Genbank:NP_626689.1,GeneID:1097880;Name=NP_626689.1;Note=SCC24.17c%2C probable  peptidase%2C len: 1220 aa%3B similar to TR:P95684 (EMBL:D83672) Streptomyces albogriseolus subtilisin-like protease%2C 1102 aa%3B fasta scores: opt: 1362 z-score: 1378.8 E(): 0%3B 33.7%25 identity in 1233 aa overlap and to TR:CAB56662 (EMBL:AL121596) Streptomyces coelicolor probable  peptidase SCF51A.10%2C 1245 aa%3B fasta scores: opt: 1509 z-score: 1527.2 E(): 0%3B 39.5%25 identity in 1278 aa overlap. Contains Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family and matches to Prosite entries PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site%2C S00137 Serine proteases%2C subtilase family%2C histidine active site and PS00138 Serine proteases%2C subtilase family%2C serine active site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC24.17c;product=peptidase;protein_id=NP_626689.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2627867	2628745	.	-	.	ID=id3021;Dbxref=GeneID:1097880;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 200.10%2C E-value 3.3e-56;gbkey=misc_feature;gene=SCC24.17c
NC_003888.3	RefSeq	sequence_feature	2628014	2628046	.	-	.	ID=id3022;Dbxref=GeneID:1097880;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site;gbkey=misc_feature;gene=SCC24.17c
NC_003888.3	RefSeq	sequence_feature	2628527	2628559	.	-	.	ID=id3023;Dbxref=GeneID:1097880;Note=PS00137 Serine proteases%2C subtilase family%2C histidine active site;gbkey=misc_feature;gene=SCC24.17c
NC_003888.3	RefSeq	sequence_feature	2628632	2628667	.	-	.	ID=id3024;Dbxref=GeneID:1097880;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SCC24.17c
NC_003888.3	RefSeq	gene	2629512	2629973	.	+	.	ID=gene2449;Dbxref=GeneID:1097881;Name=SCC24.18;gbkey=Gene;gene=SCC24.18;gene_biotype=protein_coding;gene_synonym=SCC24.18;locus_tag=SCO2447
NC_003888.3	RefSeq	CDS	2629512	2629973	.	+	0	ID=cds2410;Parent=gene2449;Dbxref=Genbank:NP_626690.1,GeneID:1097881;Name=NP_626690.1;Note=SCC24.18%2C unknown%2C len: 153 aa;gbkey=CDS;gene=SCC24.18;product=hypothetical protein;protein_id=NP_626690.1;transl_table=11
NC_003888.3	RefSeq	gene	2629970	2631634	.	+	.	ID=gene2450;Dbxref=GeneID:1097882;Name=SCC24.19;gbkey=Gene;gene=SCC24.19;gene_biotype=protein_coding;gene_synonym=SCC24.19;locus_tag=SCO2448
NC_003888.3	RefSeq	CDS	2629970	2631634	.	+	0	ID=cds2411;Parent=gene2450;Dbxref=Genbank:NP_626691.1,GeneID:1097882;Name=NP_626691.1;Note=SCC24.19%2C unknown%2C len: 554 aa;gbkey=CDS;gene=SCC24.19;product=hypothetical protein;protein_id=NP_626691.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2631759	2631764	.	+	.	ID=id3025;gbkey=RBS
NC_003888.3	RefSeq	gene	2631773	2632795	.	+	.	ID=gene2451;Dbxref=GeneID:1097883;Name=SCC24.20;gbkey=Gene;gene=SCC24.20;gene_biotype=protein_coding;gene_synonym=SCC24.20;locus_tag=SCO2449
NC_003888.3	RefSeq	CDS	2631773	2632795	.	+	0	ID=cds2412;Parent=gene2451;Dbxref=Genbank:NP_626692.1,GeneID:1097883;Name=NP_626692.1;Note=SCC24.20%2C conserved hypothetical protein%2C len: 340 aa%3B similar to TR:Q9F3J5 (EMBL:AL391763) Streptomyces coelicolor conserved hypothetical protein 340 aa%3B fasta scores: opt: 1113 Z-score: 1094.9 E(): 2.4e-53%3B 54.519%25 identity in 343 aa overlap;gbkey=CDS;gene=SCC24.20;product=hypothetical protein;protein_id=NP_626692.1;transl_table=11
NC_003888.3	RefSeq	gene	2632795	2636844	.	+	.	ID=gene2452;Dbxref=GeneID:1097884;Name=SCC24.21;gbkey=Gene;gene=SCC24.21;gene_biotype=protein_coding;gene_synonym=SCC24.21;locus_tag=SCO2450
NC_003888.3	RefSeq	CDS	2632795	2636844	.	+	0	ID=cds2413;Parent=gene2452;Dbxref=Genbank:NP_626693.1,GeneID:1097884;Name=NP_626693.1;Note=SCC24.21%2C possible Ser/Thr protein kinase (regulator)%2C len: 1349 aa%3B N-terminal region similar to SW:PKAB_STRCO (EMBL:D86821) Streptomyces coelicolor Ser/Thr protein kinase PkaB%2C 417 aa%3B blastp socres: Score %3D 109 (38.4 bits)%2C Expect %3D 0.00070%2C Sum P(2) %3D 0.00070 Identities %3D 39/121 (32%25)%2C Positives %3D 60/121 (49%25) and C-teminal region similar to SW:AFSR_STRCO (EMBL:D90155) Streptomyces coelicolor regulatory protein AfsR%2C 993 aa%3B fasta scores: opt: 510 z-score: 438.0 E(): 5.8e-17%3B 33.3%25 identity in 442 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain;gbkey=CDS;gene=SCC24.21;product=Ser/Thr protein kinase (regulator);protein_id=NP_626693.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2634724	2634936	.	+	.	ID=id3026;Dbxref=GeneID:1097884;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 28.50%2C E-value 8.3e-07;gbkey=misc_feature;gene=SCC24.21
NC_003888.3	RefSeq	ribosome_entry_site	2637002	2637007	.	+	.	ID=id3027;gbkey=RBS
NC_003888.3	RefSeq	gene	2637014	2638096	.	+	.	ID=gene2453;Dbxref=GeneID:1097885;Name=SCC24.22;gbkey=Gene;gene=SCC24.22;gene_biotype=protein_coding;gene_synonym=SCC24.22;locus_tag=SCO2451
NC_003888.3	RefSeq	CDS	2637014	2638096	.	+	0	ID=cds2414;Parent=gene2453;Dbxref=Genbank:NP_626694.1,GeneID:1097885;Name=NP_626694.1;Note=SCC24.22%2C probable rod shape-determining protein%2C len: 360 aa%3B similar to SW:MREB_BACSU (EMBL:M95582) Bacillus subtilis rod-shape determining protein MreB%2C 337 aa%3B fasta scores: opt: 740 z-score: 810.4 E(): 0%3B 34.8%25 identity in 322 aa overlap and to TR:CAB75392 (EMBL:AL139298) Streptomyces coelicolor rod shape-determining protein MreB%2C 343 aa%3B fasta scores: opt: 868 z-score: 835.5 E(): 0%3B 43.1%25 identity in 320 aa overlap;gbkey=CDS;gene=SCC24.22;product=rod shape-determining protein MreB;protein_id=NP_626694.1;transl_table=11
NC_003888.3	RefSeq	gene	2638132	2639559	.	+	.	ID=gene2454;Dbxref=GeneID:1097886;Name=SCC24.23;gbkey=Gene;gene=SCC24.23;gene_biotype=protein_coding;gene_synonym=SCC24.23;locus_tag=SCO2452
NC_003888.3	RefSeq	CDS	2638132	2639559	.	+	0	ID=cds2415;Parent=gene2454;Dbxref=Genbank:NP_626695.1,GeneID:1097886;Name=NP_626695.1;Note=SCC24.23%2C possible two-component sensor histidine kinase%2C len: 475 aa%3B similar to TR:Q9ZBY4 (EMBL:AL034355) Streptomyces coelicolor two-component sensor SCD78.15%2C 560 aa%3B fasta scores: opt: 1304 z-score: 1399.9 E(): 0%3B 46.9%25 identity in 510 aa overlap and to C-terminal region to C-terminal region of TR:Q9Z678 (EMBL:AF10227) Streptomyces coelicolor sensor-histidine kinase%2C 398 aa%3B fasta scores: opt: 158 z-score: 174.4 E(): 0.028%3B 31.9%25 identity in 182 aa overlap. Contains Pfam match to entry PF01590 GAF%2C GAF domain;gbkey=CDS;gene=SCC24.23;product=two-component sensor histidine kinase;protein_id=NP_626695.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2638582	2639001	.	+	.	ID=id3028;Dbxref=GeneID:1097886;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 56.60%2C E-value 5.3e-13;gbkey=misc_feature;gene=SCC24.23
NC_003888.3	RefSeq	gene	2639574	2639792	.	+	.	ID=gene2455;Dbxref=GeneID:1097887;Name=SCC24.24;gbkey=Gene;gene=SCC24.24;gene_biotype=protein_coding;gene_synonym=SCC24.24;locus_tag=SCO2453
NC_003888.3	RefSeq	CDS	2639574	2639792	.	+	0	ID=cds2416;Parent=gene2455;Dbxref=Genbank:NP_626696.1,GeneID:1097887;Name=NP_626696.1;Note=SCC24.24%2C unknown%2C len: 72 aa. High content in glycine and proline amino acid residues;gbkey=CDS;gene=SCC24.24;product=hypothetical protein;protein_id=NP_626696.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2639990	2639994	.	+	.	ID=id3029;gbkey=RBS
NC_003888.3	RefSeq	gene	2640001	2642232	.	+	.	ID=gene2456;Dbxref=GeneID:1097888;Name=SCC24.25;gbkey=Gene;gene=SCC24.25;gene_biotype=protein_coding;gene_synonym=SCC24.25;locus_tag=SCO2454
NC_003888.3	RefSeq	CDS	2640001	2642232	.	+	0	ID=cds2417;Parent=gene2456;Dbxref=Genbank:NP_626697.1,GeneID:1097888;Name=NP_626697.1;Note=SCC24.25%2C possible integral membrane protein%2C len: 743 aa%3B similar to SW:MMLC_STRCO (EMBL:AL031107) Streptomyces coelicolor  membrane protein SC5A7.16c%2C 705 aa%3B fasta scores: opt: 765 z-score: 808.9 E(): 0%3B 37.9%25 identity in 737 aa overlap. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membane spanning regions;gbkey=CDS;gene=SCC24.25;product=hypothetical protein;protein_id=NP_626697.1;transl_table=11
NC_003888.3	RefSeq	gene	2642344	2643939	.	-	.	ID=gene2457;Dbxref=GeneID:1097889;Name=SCC24.26c;gbkey=Gene;gene=SCC24.26c;gene_biotype=protein_coding;gene_synonym=SCC24.26c;locus_tag=SCO2455
NC_003888.3	RefSeq	CDS	2642344	2643939	.	-	0	ID=cds2418;Parent=gene2457;Dbxref=Genbank:NP_626698.1,GeneID:1097889;Name=NP_626698.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;gene=SCC24.26c;product=spermidine synthase;protein_id=NP_626698.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2642512	2643327	.	-	.	ID=id3030;Dbxref=GeneID:1097889;Note=Pfam match to entry PF01564 Spermine_synth%2C Spermine/spermidine synthase%2C score 195.80%2C E-value 6.5e-55;gbkey=misc_feature;gene=SCC24.26c
NC_003888.3	RefSeq	ribosome_entry_site	2643948	2643951	.	-	.	ID=id3031;gbkey=RBS
NC_003888.3	RefSeq	gene	2644019	2644459	.	-	.	ID=gene2458;Dbxref=GeneID:1097890;Name=SCC24.27c;gbkey=Gene;gene=SCC24.27c;gene_biotype=protein_coding;gene_synonym=SCC24.27c;locus_tag=SCO2456
NC_003888.3	RefSeq	CDS	2644019	2644459	.	-	0	ID=cds2419;Parent=gene2458;Dbxref=Genbank:NP_626699.1,GeneID:1097890;Name=NP_626699.1;Note=SCC24.27c%2C possible integral membrane protein%2C len: 146 aa%3B similar to SW:Y0B1_MYCTU (EMBL:Z77724) Mycobacterium tuberculosis hypothetical 13.7 kD protein CY227.01c%2C MTCY227.01c%2C 133 aa%3B fasta scores: opt: 241 z-score: 297.9 E(): 3.7e-09%3B 34.8%25 identity in 135 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC24.27c;product=hypothetical protein;protein_id=NP_626699.1;transl_table=11
NC_003888.3	RefSeq	gene	2644511	2644906	.	-	.	ID=gene2459;Dbxref=GeneID:1097891;Name=SCC24.28c;gbkey=Gene;gene=SCC24.28c;gene_biotype=protein_coding;gene_synonym=SCC24.28c;locus_tag=SCO2457
NC_003888.3	RefSeq	CDS	2644511	2644906	.	-	0	ID=cds2420;Parent=gene2459;Dbxref=Genbank:NP_626700.1,GeneID:1097891;Name=NP_626700.1;Note=SCC24.28c%2C possible lipoprotein%2C len: 131 aa%3B similar to SW:Y0B2_MYCTU (EMBL:Z77724) Mycobacterium tuberculosis hypothetical 15.0 kD protein CY227.02c precursor%2C MTCY227.02c%2C 143 aa%3B fasta scores: opt: 130 z-score: 169.2 E(): 0.054%3B 26.5%25 identity in 136 aa overlap. Contains match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC24.28c;product=lipoprotein;protein_id=NP_626700.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2644838	2644870	.	-	.	ID=id3032;Dbxref=GeneID:1097891;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCC24.28c
NC_003888.3	RefSeq	gene	2644903	2645421	.	-	.	ID=gene2460;Dbxref=GeneID:1097892;Name=SCC24.29c;gbkey=Gene;gene=SCC24.29c;gene_biotype=protein_coding;gene_synonym=SCC24.29c;locus_tag=SCO2458
NC_003888.3	RefSeq	CDS	2644903	2645421	.	-	0	ID=cds2421;Parent=gene2460;Dbxref=Genbank:NP_626701.1,GeneID:1097892;Name=NP_626701.1;Note=SCC24.29c%2C hypothetical protein%2C len: 172 aa%3B similar to TR:Q9X8S3 (EMBL:AL049754) Streptomyces coelicolor hypothetical 20.1 kD protein SCH10.34c%2C 185 aa%3B fasta scores: opt: 412 z-score: 505.6 E(): 1e-20%3B 40.7%25 identity in 172 aa overlap;gbkey=CDS;gene=SCC24.29c;product=hypothetical protein;protein_id=NP_626701.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2644911	2644915	.	-	.	ID=id3033;Dbxref=GeneID:1097892;gbkey=RBS;gene=SCC24.29c
NC_003888.3	RefSeq	gene	2645538	2646071	.	+	.	ID=gene2461;Dbxref=GeneID:1097893;Name=SCC24.30;gbkey=Gene;gene=SCC24.30;gene_biotype=protein_coding;gene_synonym=SCC24.30;locus_tag=SCO2459
NC_003888.3	RefSeq	CDS	2645538	2646071	.	+	0	ID=cds2422;Parent=gene2461;Dbxref=Genbank:NP_626702.1,GeneID:1097893;Name=NP_626702.1;Note=SCC24.30%2C unknown%2C len: 177 aa;gbkey=CDS;gene=SCC24.30;product=hypothetical protein;protein_id=NP_626702.1;transl_table=11
NC_003888.3	RefSeq	gene	2646222	2646650	.	-	.	ID=gene2462;Dbxref=GeneID:1097894;Name=SCC24.31c;gbkey=Gene;gene=SCC24.31c;gene_biotype=protein_coding;gene_synonym=SCC24.31c;locus_tag=SCO2460
NC_003888.3	RefSeq	CDS	2646222	2646650	.	-	0	ID=cds2423;Parent=gene2462;Dbxref=Genbank:NP_626703.1,GeneID:1097894;Name=NP_626703.1;Note=SCC24.31c%2C hypothetical protein%2C len: 142 aa%3B similar to TR:O06633 (EMBL:Z95618) Mycobacterium tuberculosis hypothetical 12.5 kD protein MTCY07H7A.08c%2C 115 aa%3B fasta scores: opt: 109 z-score: 150.6 E(): 0.59%3B 35.0%25 identity in 140 aa overlap;gbkey=CDS;gene=SCC24.31c;product=hypothetical protein;protein_id=NP_626703.1;transl_table=11
NC_003888.3	RefSeq	gene	2646860	2646933	.	-	.	ID=gene2463;Dbxref=GeneID:3240011;Name=SCOt11;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt11
NC_003888.3	RefSeq	tRNA	2646860	2646933	.	-	.	ID=rna17;Parent=gene2463;Dbxref=GeneID:3240011;Note=tRNA Met anticodon CAT%2C Cove score 87.30;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	exon	2646860	2646933	.	-	.	ID=id3034;Parent=rna17;Dbxref=GeneID:3240011;Note=tRNA Met anticodon CAT%2C Cove score 87.30;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	gene	2647132	2647204	.	-	.	ID=gene2464;Dbxref=GeneID:3240012;Name=SCOt12;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt12
NC_003888.3	RefSeq	tRNA	2647132	2647204	.	-	.	ID=rna18;Parent=gene2464;Dbxref=GeneID:3240012;Note=tRNA Asn anticodon GTT%2C Cove score 77.32;gbkey=tRNA;product=tRNA-Asn
NC_003888.3	RefSeq	exon	2647132	2647204	.	-	.	ID=id3035;Parent=rna18;Dbxref=GeneID:3240012;Note=tRNA Asn anticodon GTT%2C Cove score 77.32;gbkey=tRNA;product=tRNA-Asn
NC_003888.3	RefSeq	gene	2647210	2647282	.	-	.	ID=gene2465;Dbxref=GeneID:3240013;Name=SCOt13;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt13
NC_003888.3	RefSeq	tRNA	2647210	2647282	.	-	.	ID=rna19;Parent=gene2465;Dbxref=GeneID:3240013;Note=tRNA Asn anticodon GTT%2C Cove score 77.41;gbkey=tRNA;product=tRNA-Asn
NC_003888.3	RefSeq	exon	2647210	2647282	.	-	.	ID=id3036;Parent=rna19;Dbxref=GeneID:3240013;Note=tRNA Asn anticodon GTT%2C Cove score 77.41;gbkey=tRNA;product=tRNA-Asn
NC_003888.3	RefSeq	ribosome_entry_site	2647404	2647407	.	+	.	ID=id3037;gbkey=RBS
NC_003888.3	RefSeq	gene	2647411	2647737	.	+	.	ID=gene2466;Dbxref=GeneID:1097895;Name=SCC24.32;gbkey=Gene;gene=SCC24.32;gene_biotype=protein_coding;gene_synonym=SCC24.32;locus_tag=SCO2461
NC_003888.3	RefSeq	CDS	2647411	2647737	.	+	0	ID=cds2424;Parent=gene2466;Dbxref=Genbank:NP_626704.1,GeneID:1097895;Name=NP_626704.1;Note=SCC24.32%2C possible hypothetical protein%2C len: 108 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC24.32;product=hypothetical protein;protein_id=NP_626704.1;transl_table=11
NC_003888.3	RefSeq	gene	2647782	2649230	.	+	.	ID=gene2467;Dbxref=GeneID:1097896;Name=SC7A8.01;gbkey=Gene;gene=SC7A8.01;gene_biotype=protein_coding;gene_synonym=SC7A8.01,SCC24.33;locus_tag=SCO2462
NC_003888.3	RefSeq	CDS	2647782	2649230	.	+	0	ID=cds2425;Parent=gene2467;Dbxref=Genbank:NP_733572.1,GeneID:1097896;Name=NP_733572.1;Note=SC7A8.01%2C probable sugar kinase (fragment)%2C len: >434 aa%3B similar to TR:CAB61582 (EMBL:AL133210) Streptomyces coelicolor xylulose kinase (fragment) XylB%2C 432 aa%3B fasta scores: opt: 822 z-score: 871.9 E(): 0%3B 38.8%25 identity in 418 aa overlap and to SW:XYLB_STRRU (EMBL:M73789) Streptomyces rubiginosus xylulose kinase (EC 2.7.1.17) XylB%2C 481 aa%3B fasta scores: opt: 814 z-score: 862.8 E(): 0%3B 39.5%25 identity in 423 aa overlap . Contains Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases and PS00445 FGGY family of carbohydrate kinases signature 2~SCC24.33%2C probable sugar kinase (fragment)%2C len: >82 aa%3B similar to SW:XYLB_STRRU (EMBL:M73789) Streptomyces rubiginosus xylulose kinase (EC 2.7.1.17) XylB%2C 481 aa%3B fasta scores: opt: 135 z-score: 170.4 E(): 0.05%3B 34.1%25 identity in 82 aa overlap;gbkey=CDS;gene=SC7A8.01;product=sugar kinase;protein_id=NP_733572.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2647995	2648951	.	+	.	ID=id3038;Dbxref=GeneID:1097896;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C score 193.10%2C E-value 4.3e-54;gbkey=misc_feature;gene=SC7A8.01
NC_003888.3	RefSeq	sequence_feature	2648805	2648870	.	+	.	ID=id3039;Dbxref=GeneID:1097896;Note=PS00445 FGGY family of carbohydrate kinases signature 2;gbkey=misc_feature;gene=SC7A8.01
NC_003888.3	RefSeq	gene	2649370	2651103	.	+	.	ID=gene2468;Dbxref=GeneID:1097897;Name=SC7A8.02;gbkey=Gene;gene=SC7A8.02;gene_biotype=protein_coding;gene_synonym=SC7A8.02;locus_tag=SCO2463
NC_003888.3	RefSeq	CDS	2649370	2651103	.	+	0	ID=cds2426;Parent=gene2468;Dbxref=Genbank:NP_626705.1,GeneID:1097897;Name=NP_626705.1;Note=SC7A8.02%2C probable ABC transporter%2C len: 577 aa%3B similar to TR:Q9WYC3 (EMBL:AE001710) Thermotoga maritima ABC transporter%2C ATP-binding protein%2C 577 aa%3B fasta scores: opt: 1411 z-score: 1575.1 E(): 0%3B 39.9%25 identity in 569 aa overlap and to SW:YC73_MYCTU (EMBL:Z77137) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1273c%2C 582 aa%3B fasta scores: opt: 1966 z-score: 2193.8 E(): 0%3B 51.7%25 identity in 574 aa overlap. Contains Pfam two matches to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region and two matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC7A8.02;product=ABC transporter;protein_id=NP_626705.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2649418	2650233	.	+	.	ID=id3040;Dbxref=GeneID:1097897;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 143.20%2C E-value 4.6e-39;gbkey=misc_feature;gene=SC7A8.02
NC_003888.3	RefSeq	sequence_feature	2650450	2651004	.	+	.	ID=id3041;Dbxref=GeneID:1097897;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 182.30%2C E-value 7.9e-51;gbkey=misc_feature;gene=SC7A8.02
NC_003888.3	RefSeq	sequence_feature	2650471	2650494	.	+	.	ID=id3042;Dbxref=GeneID:1097897;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7A8.02
NC_003888.3	RefSeq	sequence_feature	2650783	2650827	.	+	.	ID=id3043;Dbxref=GeneID:1097897;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC7A8.02
NC_003888.3	RefSeq	ribosome_entry_site	2651091	2651095	.	+	.	ID=id3044;Dbxref=GeneID:1097897;gbkey=RBS;gene=SC7A8.02
NC_003888.3	RefSeq	gene	2651103	2653031	.	+	.	ID=gene2469;Dbxref=GeneID:1097898;Name=SC7A8.03;gbkey=Gene;gene=SC7A8.03;gene_biotype=protein_coding;gene_synonym=SC7A8.03;locus_tag=SCO2464
NC_003888.3	RefSeq	CDS	2651103	2653031	.	+	0	ID=cds2427;Parent=gene2469;Dbxref=Genbank:NP_626706.1,GeneID:1097898;Name=NP_626706.1;Note=SC7A8.03%2C probable ABC transporter%2C len: 642 aa%3B similar to TR:Q9WYC4 (EMBL:AE001710) Thermotoga maritima ABC transporter%2C ATP-binding protein%2C 598 aa%3B fasta scores: opt: 1520 z-score: 1587.7 E(): 0%3B 40.3%25 identity in 613 aa overlap and to SW:YC72_MYCTU (EMBL:Z77137) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1273c%2C 631 aa%3B fasta scores: opt: 2325 z-score: 2426.2 E(): 0%3B 57.6%25 identity in 632 aa overlap. Contains two Pfam matches to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region and two matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC7A8.03;product=ABC transporter;protein_id=NP_626706.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2651217	2652155	.	+	.	ID=id3045;Dbxref=GeneID:1097898;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 190.00%2C E-value 3.7e-53;gbkey=misc_feature;gene=SC7A8.03
NC_003888.3	RefSeq	sequence_feature	2652369	2652926	.	+	.	ID=id3046;Dbxref=GeneID:1097898;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 202.30%2C E-value 7.5e-57;gbkey=misc_feature;gene=SC7A8.03
NC_003888.3	RefSeq	sequence_feature	2652390	2652413	.	+	.	ID=id3047;Dbxref=GeneID:1097898;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7A8.03
NC_003888.3	RefSeq	sequence_feature	2652705	2652749	.	+	.	ID=id3048;Dbxref=GeneID:1097898;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC7A8.03
NC_003888.3	RefSeq	sequence_feature	2652881	2654540	.	-	.	ID=id3049;Note=previously sequence fragment (EMBL:X52980);gbkey=misc_feature
NC_003888.3	RefSeq	gene	2653137	2654327	.	-	.	ID=gene2470;Dbxref=GeneID:1097899;Name=hrdA;gbkey=Gene;gene=hrdA;gene_biotype=protein_coding;gene_synonym=hrdA,SC7A8.04c;locus_tag=SCO2465
NC_003888.3	RefSeq	CDS	2653137	2654327	.	-	0	ID=cds2428;Parent=gene2470;Dbxref=Genbank:NP_626707.1,GeneID:1097899;Name=NP_626707.1;Note=SC7A8.04c%2C hrdA%2C RNA polymerase principal sigma factor%2C len: 396 aa%3B identical to previously sequenced SW:HRDA_STRCO (EMBL:X52980) Streptomyces coelicolor RNA polymerase principal sigma factor HrdA%2C 396 aa and highly similar to SW:RPSD_STRAU (EMBL:M90410) Streptomyces aureofaciens RNA polumerase sigma factor RpoD%2C 317 aa%3B fasta scores: opt: 1792 z-score: 1762.6 E(): 0%3B 89.9%25 identity in 316 aa overlap and to S. coelicolor SC5B8.10%2C 511 aa%3B fasta scores: opt: 1276 z-score: 1056.4 E(): 0%3B 51.6%25 identity in 397 aa overlap. Contains Pfam match to entry PF00140 sigma70%2C Sigma-70 factor and two matches to Prosite entries PS00715 Sigma-70 factors family signature 1 and PS00716 Sigma-70 factors family signature 2. Contains also a possible helix-turn-helix motif at residues 355..376 (+6.21 SD);gbkey=CDS;gene=hrdA;product=RNA polymerase principal sigma factor;protein_id=NP_626707.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2653176	2653859	.	-	.	ID=id3050;Dbxref=GeneID:1097899;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 452.40%2C E-value 3.7e-132;gbkey=misc_feature;gene=hrdA
NC_003888.3	RefSeq	sequence_feature	2653182	2653262	.	-	.	ID=id3051;Dbxref=GeneID:1097899;Note=PS00716 Sigma-70 factors family signature 2;gbkey=misc_feature;gene=hrdA
NC_003888.3	RefSeq	sequence_feature	2653728	2653769	.	-	.	ID=id3052;Dbxref=GeneID:1097899;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=hrdA
NC_003888.3	RefSeq	gene	2654512	2655117	.	+	.	ID=gene2471;Dbxref=GeneID:1097900;Name=SC7A8.05;gbkey=Gene;gene=SC7A8.05;gene_biotype=protein_coding;gene_synonym=SC7A8.05;locus_tag=SCO2466
NC_003888.3	RefSeq	CDS	2654512	2655117	.	+	0	ID=cds2429;Parent=gene2471;Dbxref=Genbank:NP_626708.1,GeneID:1097900;Name=NP_626708.1;Note=SC7A8.05%2C hypothetical protein%2C len: 201 aa%3B identical to C-terminus of previously sequenced TR:CAB51553 (EMBL:AJ244019) Streptomyces coelicolor A3(2) hypothetical 14.6 kD protein%2C 132 aa;gbkey=CDS;gene=SC7A8.05;product=hypothetical protein;protein_id=NP_626708.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2654718	2659478	.	-	.	ID=id3053;Note=fragment previously sequenced SCO244019 AJ244019 Streptomyces coelicolor A3(2) dnaG gene and flanking genes;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2655114	2656115	.	+	.	ID=gene2472;Dbxref=GeneID:1097901;Name=SC7A8.06;gbkey=Gene;gene=SC7A8.06;gene_biotype=protein_coding;gene_synonym=SC7A8.06;locus_tag=SCO2467
NC_003888.3	RefSeq	CDS	2655114	2656115	.	+	0	ID=cds2430;Parent=gene2472;Dbxref=Genbank:NP_626709.1,GeneID:1097901;Name=NP_626709.1;Note=SC7A8.06%2C hypothetical protein%2C len: 333 aa%3B identical to previously sequenced TR:CAB51552 (EMBL:AJ244019) Streptomyces coelicolor A3(2) hypothetical 37.1 kD protein%2C 333 aa;gbkey=CDS;gene=SC7A8.06;product=hypothetical protein;protein_id=NP_626709.1;transl_table=11
NC_003888.3	RefSeq	gene	2656131	2658056	.	-	.	ID=gene2473;Dbxref=GeneID:1097902;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;gene_synonym=SC7A8.07c;locus_tag=SCO2468
NC_003888.3	RefSeq	CDS	2656131	2658056	.	-	0	ID=cds2431;Parent=gene2473;Dbxref=Genbank:NP_626710.1,GeneID:1097902;Name=NP_626710.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=NP_626710.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2657019	2657273	.	-	.	ID=id3054;Dbxref=GeneID:1097902;Note=Pfam match to entry PF01751 Toprim%2C Toprim domain%2C score 60.20%2C E-value 4.4e-14;gbkey=misc_feature;gene=dnaG
NC_003888.3	RefSeq	sequence_feature	2657778	2657948	.	-	.	ID=id3055;Dbxref=GeneID:1097902;Note=Pfam match to entry PF01807 zf-CHC2%2C CHC2 zinc finger%2C score 134.20%2C E-value 2.4e-36;gbkey=misc_feature;gene=dnaG
NC_003888.3	RefSeq	gene	2658086	2659351	.	-	.	ID=gene2474;Dbxref=GeneID:1097903;Name=SC7A8.08c;gbkey=Gene;gene=SC7A8.08c;gene_biotype=protein_coding;gene_synonym=SC7A8.08c;locus_tag=SCO2469
NC_003888.3	RefSeq	CDS	2658086	2659351	.	-	0	ID=cds2432;Parent=gene2474;Dbxref=Genbank:NP_626711.1,GeneID:1097903;Name=NP_626711.1;Note=SC7A8.08c%2C probable reductase%2C len: 421 aa%3B identical to previously sequenced TR:CAB51550 (EMBL:AJ244019) Streptomyces coelicolor A3(2) dnaG gene and flanking genes and similar to SW:CAMA_PSEPU (EMBL:J05406) Pseudomonas putida putidaredoxin reductase (EC 1.18.1.-) CamA%2C 422 aa%3B fasta scores: opt: 805 z-score: 922.5 E(): 0%3B 35.8%25 identity in 422 aa overlap;gbkey=CDS;gene=SC7A8.08c;product=reductase;protein_id=NP_626711.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2659359	2659363	.	-	.	ID=id3056;gbkey=RBS
NC_003888.3	RefSeq	gene	2659480	2660754	.	-	.	ID=gene2475;Dbxref=GeneID:1097904;Name=SC7A8.09c;gbkey=Gene;gene=SC7A8.09c;gene_biotype=protein_coding;gene_synonym=SC7A8.09c;locus_tag=SCO2470
NC_003888.3	RefSeq	CDS	2659480	2660754	.	-	0	ID=cds2433;Parent=gene2475;Dbxref=Genbank:NP_626712.1,GeneID:1097904;Name=NP_626712.1;Note=dGTPase family type 2 subfamily%3B presumably hydrolyzes dGTP to deoxyguanosine and triphosphate;gbkey=CDS;gene=SC7A8.09c;product=deoxyguanosinetriphosphate triphosphohydrolase-like protein;protein_id=NP_626712.1;transl_table=11
NC_003888.3	RefSeq	gene	2660813	2661637	.	-	.	ID=gene2476;Dbxref=GeneID:1097905;Name=SC7A8.10c;gbkey=Gene;gene=SC7A8.10c;gene_biotype=protein_coding;gene_synonym=SC7A8.10c;locus_tag=SCO2471
NC_003888.3	RefSeq	CDS	2660813	2661637	.	-	0	ID=cds2434;Parent=gene2476;Dbxref=Genbank:NP_626713.1,GeneID:1097905;Name=NP_626713.1;Note=SC7A8.10c%2C possible hypothetical protein%2C len: 274 aa%3B similar to various hypothetical proteins%2C e.g. TR:P95216 (EMBL:Z86089) Mycobacterium tuberculosis hypothetical 26.2 kD protein%2C 247 aa%3B fasta scores: opt:413 z-score: 450.1 E(): 1.1e-17%3B 34.5%25 identity in 232 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.10c;product=hypothetical protein;protein_id=NP_626713.1;transl_table=11
NC_003888.3	RefSeq	gene	2661818	2662504	.	+	.	ID=gene2477;Dbxref=GeneID:1097906;Name=SC7A8.11;gbkey=Gene;gene=SC7A8.11;gene_biotype=protein_coding;gene_synonym=SC7A8.11;locus_tag=SCO2472
NC_003888.3	RefSeq	CDS	2661818	2662504	.	+	0	ID=cds2435;Parent=gene2477;Dbxref=Genbank:NP_626714.1,GeneID:1097906;Name=NP_626714.1;Note=SC7A8.11%2C possible integral membrane protein%2C len: 228 aa%3B similar to SW:YGJQ_ECOLI (EMBL:U18997) Escherichia coli hypothetical 25%2C5 kD protein%2C 230 aa%3B fasta scores: opt: 405 z-score: 493.9 E(): 4e-20%3B 37.7%25 identity in 207 aa overlap and to SW:SANA_ECOLI (EMBL:Z47804) Escherichia coli SanA protein%2C 239 aa%3B fasta scores: opt: 328 z-score: 401.5 E(): 5.7e-15%3B 34.7%25 identity in 170 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.11;product=hypothetical protein;protein_id=NP_626714.1;transl_table=11
NC_003888.3	RefSeq	gene	2662608	2665067	.	+	.	ID=gene2478;Dbxref=GeneID:1097907;Name=SC7A8.12;gbkey=Gene;gene=SC7A8.12;gene_biotype=protein_coding;gene_synonym=SC7A8.12;locus_tag=SCO2473
NC_003888.3	RefSeq	CDS	2662608	2665067	.	+	0	ID=cds2436;Parent=gene2478;Dbxref=Genbank:NP_626715.1,GeneID:1097907;Name=NP_626715.1;Note=SC7A8.12%2C probable nitrate reductase%2C len: 819 aa%3B similar to SW:NASC_BACSU (EMBL:D50453) Bacillus subtilis assimilatory nitrate reductase catalytic subunit (EC 1.7.99.4) NasC%2C 710 aa%3B fasta scores: opt: 1568 z-score: 1572.1 E(): 0%3B 37.9%25 identity in 816 aa overlap. Contains Pfam matches to entries PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases and PF01568 Molydop_binding%2C Molydopterin dinucleotide binding domain. Contains also glycine/serine rich region;gbkey=CDS;gene=SC7A8.12;product=nitrate reductase;protein_id=NP_626715.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2663889	2664077	.	+	.	ID=id3057;Dbxref=GeneID:1097907;Note=Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 41.50%2C E-value 2.5e-12;gbkey=misc_feature;gene=SC7A8.12
NC_003888.3	RefSeq	sequence_feature	2664225	2664599	.	+	.	ID=id3058;Dbxref=GeneID:1097907;Note=glycine/serine rich region;gbkey=misc_feature;gene=SC7A8.12
NC_003888.3	RefSeq	sequence_feature	2664717	2665040	.	+	.	ID=id3059;Dbxref=GeneID:1097907;Note=Pfam match to entry PF01568 Molydop_binding%2C Molydopterin dinucleotide binding domain%2C score 140.00%2C E-value 4.3e-38;gbkey=misc_feature;gene=SC7A8.12
NC_003888.3	RefSeq	ribosome_entry_site	2665186	2665191	.	+	.	ID=id3060;gbkey=RBS
NC_003888.3	RefSeq	gene	2665196	2666839	.	+	.	ID=gene2479;Dbxref=GeneID:1097908;Name=SC7A8.13;gbkey=Gene;gene=SC7A8.13;gene_biotype=protein_coding;gene_synonym=SC7A8.13;locus_tag=SCO2474
NC_003888.3	RefSeq	CDS	2665196	2666839	.	+	0	ID=cds2437;Parent=gene2479;Dbxref=Genbank:NP_626716.1,GeneID:1097908;Name=NP_626716.1;Note=SC7A8.13%2C probable metalloproteinase (hypothetical protein)%2C len: 547 aa%3B similar to TR:O06694 (EMBL:U50548) Vibrio vulnificus metalloprotease%2C 606 aa%3B fasta scores: opt: 493 z-score: 516.9 E(): 2.1e-21%3B 31.5%25 identity in 461 aa overlap and to SW:PROA_LEGPN (EMBL:M31884) Legionella pneumophila zinc metalloproteinase precursor (EC 3.4.24.-) ProA%2C 543 aa%3B fasta scores: opt: 475 z-score: 498.8 E(): 2.1e-20%3B 31.4%25 identity in 417 aa overlap. Contains Pfam match to entry PF01447 Peptidase_M4%2C Thermolysin family peptidase and match to Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.13;product=metalloproteinase;protein_id=NP_626716.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2665814	2666830	.	+	.	ID=id3061;Dbxref=GeneID:1097908;Note=Pfam match to entry PF01447 Peptidase_M4%2C Thermolysin family peptidase%2C score 304.90%2C E-value 9.5e-88;gbkey=misc_feature;gene=SC7A8.13
NC_003888.3	RefSeq	sequence_feature	2666264	2666293	.	+	.	ID=id3062;Dbxref=GeneID:1097908;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC7A8.13
NC_003888.3	RefSeq	ribosome_entry_site	2666933	2666937	.	+	.	ID=id3063;gbkey=RBS
NC_003888.3	RefSeq	gene	2666940	2667869	.	+	.	ID=gene2480;Dbxref=GeneID:1097909;Name=SC7A8.14;gbkey=Gene;gene=SC7A8.14;gene_biotype=protein_coding;gene_synonym=SC7A8.14;locus_tag=SCO2475
NC_003888.3	RefSeq	CDS	2666940	2667869	.	+	0	ID=cds2438;Parent=gene2480;Dbxref=Genbank:NP_626717.1,GeneID:1097909;Name=NP_626717.1;Note=SC7A8.14%2C probable lysR-family transcriptional regulator%2C len: 309 aa%3B similar to TR:O06466 (EMBL:U94336) Xanthomonas campestris oxidative stress transcriptional regulator OxyR%2C 313 aa%3B fasta scores: opt: 374 z-score: 419.6 E(): 5.5e-16%3B 29.7%25 identity in 316 aa overlap and SW:OXYR_MYCLE (EMBL:L01095) Mycobacterium leprae probable hydrogen peroxide-inducible genes activator OxyR%2C 311 aa%3B fasta scores: opt: 375 z-score: 420.8 E(): 4.8e-16%3B 33.7%25 identity in 246 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Contains a possible helix-turn-helix motif at residues 16..37 (+3.82 SD);gbkey=CDS;gene=SC7A8.14;product=LysR family transcriptional regulator;protein_id=NP_626717.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2666946	2667377	.	+	.	ID=id3064;Dbxref=GeneID:1097909;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 131.30%2C E-value 1.8e-35;gbkey=misc_feature;gene=SC7A8.14
NC_003888.3	RefSeq	sequence_feature	2666988	2667080	.	+	.	ID=id3065;Dbxref=GeneID:1097909;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC7A8.14
NC_003888.3	RefSeq	gene	2667818	2668561	.	-	.	ID=gene2481;Dbxref=GeneID:1097910;Name=SC7A8.15c;gbkey=Gene;gene=SC7A8.15c;gene_biotype=protein_coding;gene_synonym=SC7A8.15c;locus_tag=SCO2476
NC_003888.3	RefSeq	CDS	2667818	2668561	.	-	0	ID=cds2439;Parent=gene2481;Dbxref=Genbank:NP_626718.1,GeneID:1097910;Name=NP_626718.1;Note=SC7A8.15c%2C probable dehydrogenase/reductase ( hypothetical protein)%2C len: 247 aa%3B similar to TR:CAB52925 (EMBL:AL109949) Streptomyces coelicolor oxidoreductase SCJ11.40%2C 250 aa%3B fasta scores: opt: 591 z-score: 665.9 E(): 1.1e-29%3B 43.1%25 identity in 246 aa overlap and to SW:2BHD_STREX AC:P19992 Streptomyces exfoliatus (Streptomyces hydrogenans) 20-beta-hydroxysteroid dehydrogenase (EC 1.1.1.53)%2C 25 aa%3B fasta scores: opt: 414 z-score: 469.7 E(): 9e-19%3B 36.1%25 identity in 249 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.15c;product=dehydrogenase/reductase;protein_id=NP_626718.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2667842	2667931	.	-	.	ID=id3066;Dbxref=GeneID:1097910;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 36.30%2C E-value 6.9e-07;gbkey=misc_feature;gene=SC7A8.15c
NC_003888.3	RefSeq	sequence_feature	2668004	2668543	.	-	.	ID=id3067;Dbxref=GeneID:1097910;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 171.80%2C E-value 1.1e-47;gbkey=misc_feature;gene=SC7A8.15c
NC_003888.3	RefSeq	sequence_feature	2668067	2668153	.	-	.	ID=id3068;Dbxref=GeneID:1097910;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC7A8.15c
NC_003888.3	RefSeq	gene	2668624	2669391	.	-	.	ID=gene2482;Dbxref=GeneID:1097911;Name=SC7A8.16c;gbkey=Gene;gene=SC7A8.16c;gene_biotype=protein_coding;gene_synonym=SC7A8.16c;locus_tag=SCO2477
NC_003888.3	RefSeq	CDS	2668624	2669391	.	-	0	ID=cds2440;Parent=gene2482;Dbxref=Genbank:NP_626719.1,GeneID:1097911;Name=NP_626719.1;gbkey=CDS;gene=SC7A8.16c;product=short chain dehydrogenase;protein_id=NP_626719.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2668651	2668743	.	-	.	ID=id3069;Dbxref=GeneID:1097911;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 46.40%2C E-value 6.4e-10;gbkey=misc_feature;gene=SC7A8.16c
NC_003888.3	RefSeq	sequence_feature	2668816	2669346	.	-	.	ID=id3070;Dbxref=GeneID:1097911;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 151.60%2C E-value 1.3e-41;gbkey=misc_feature;gene=SC7A8.16c
NC_003888.3	RefSeq	gene	2669524	2670111	.	-	.	ID=gene2483;Dbxref=GeneID:1097912;Name=SC7A8.17c;gbkey=Gene;gene=SC7A8.17c;gene_biotype=protein_coding;gene_synonym=SC7A8.17c;locus_tag=SCO2478
NC_003888.3	RefSeq	CDS	2669524	2670111	.	-	0	ID=cds2441;Parent=gene2483;Dbxref=Genbank:NP_626720.1,GeneID:1097912;Name=NP_626720.1;Note=SC7A8.17c%2C possible reductase%2C len: 195 aa%3B similar to TR:Q9ZGD0 (EMBL:AF080235) Streptomyces cyanogenus reductase homolog LanO%2C 193 aa%3B fasta scores: opt: 780 z-score: 927.8 E(): 0%3B 60.1%25 identity in 188 aa overlap and to TR:AAF00220 (EMBL:AF164961) Streptomyces fradiae UrdO%2C 197 aa%3B fasta scores: opt: 775 z-score: 921.8 E(): 0%3B 55.7%25 identity in 194 aa overlap;gbkey=CDS;gene=SC7A8.17c;product=reductase;protein_id=NP_626720.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2670312	2670315	.	+	.	ID=id3071;gbkey=RBS
NC_003888.3	RefSeq	gene	2670321	2670863	.	+	.	ID=gene2484;Dbxref=GeneID:1097913;Name=SC7A8.18;gbkey=Gene;gene=SC7A8.18;gene_biotype=protein_coding;gene_synonym=SC7A8.18;locus_tag=SCO2479
NC_003888.3	RefSeq	CDS	2670321	2670863	.	+	0	ID=cds2442;Parent=gene2484;Dbxref=Genbank:NP_626721.1,GeneID:1097913;Name=NP_626721.1;Note=SC7A8.18%2C possible membrane protein%2C len: 180 aa. Contains possible hydrophobic membrane spanning regions both at N- and C-terminal domains;gbkey=CDS;gene=SC7A8.18;product=hypothetical protein;protein_id=NP_626721.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2670971	2670974	.	+	.	ID=id3072;gbkey=RBS
NC_003888.3	RefSeq	gene	2670982	2671614	.	+	.	ID=gene2485;Dbxref=GeneID:1097914;Name=SC7A8.19;gbkey=Gene;gene=SC7A8.19;gene_biotype=protein_coding;gene_synonym=SC7A8.19;locus_tag=SCO2480
NC_003888.3	RefSeq	CDS	2670982	2671614	.	+	0	ID=cds2443;Parent=gene2485;Dbxref=Genbank:NP_626722.1,GeneID:1097914;Name=NP_626722.1;Note=SC7A8.19%2C possible hypothetical protein%2C len: 210 aa. Similar to Streptomyces coelicolor SCM10.24%2C 221 aa%3B fasta scores: opt: 672 z-score: 568.7 E(): 2.9e-26%3B 50.2%25 identity in 211 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.19;product=hypothetical protein;protein_id=NP_626722.1;transl_table=11
NC_003888.3	RefSeq	gene	2671552	2671941	.	-	.	ID=gene2486;Dbxref=GeneID:1097915;Name=SC7A8.20c;gbkey=Gene;gene=SC7A8.20c;gene_biotype=protein_coding;gene_synonym=SC7A8.20c;locus_tag=SCO2481
NC_003888.3	RefSeq	CDS	2671552	2671941	.	-	0	ID=cds2444;Parent=gene2486;Dbxref=Genbank:NP_626723.1,GeneID:1097915;Name=NP_626723.1;Note=SC7A8.20c%2C hypothetical protein%2C len: 129 aa%3B similar to various hypothetical proteins%2C e.g. SW:YYBR_BACSU (EMBL:D26185) Bacillus subtilis hypothetical 14.7 kD protein in CotF-TetB intergenic region YybR%2C 125 aa%3B fasta scores: opt: 333 z-score: 424.6 E(): 2.9e-16%3B 45.5%25 identity in 112 aa overlap and to Streptomyces coelicolor SC7A1.18c%2C 141 aa%3B fasta scores: opt: 243 z-score: 270.7 E(): 1.1e-09%3B 49.4%25 identity in 77 aa overlap. Contains Pfam match to entry PF01638 DUF24%2C Protein of unknown function;gbkey=CDS;gene=SC7A8.20c;product=hypothetical protein;protein_id=NP_626723.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2671612	2671884	.	-	.	ID=id3073;Dbxref=GeneID:1097915;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function%2C score 155.40%2C E-value 9.8e-43;gbkey=misc_feature;gene=SC7A8.20c
NC_003888.3	RefSeq	gene	2672049	2672984	.	+	.	ID=gene2487;Dbxref=GeneID:1097916;Name=SC7A8.21;gbkey=Gene;gene=SC7A8.21;gene_biotype=protein_coding;gene_synonym=SC7A8.21;locus_tag=SCO2482
NC_003888.3	RefSeq	CDS	2672049	2672984	.	+	0	ID=cds2445;Parent=gene2487;Dbxref=Genbank:NP_626724.1,GeneID:1097916;Name=NP_626724.1;Note=SC7A8.21%2C possible dehydrogenase (hypothetical protein)%2C len: 311 aa%3B similar to various hypothetical dehydrogenases%2C e.g. TR:Q9YE14 (EMBL:AP000060) Aeropyrum pernix 287 aa long hypothetical 3-hydroxyisobutyrate dehydrogenase APE0756%2C 287 aa%3B fasta scores: opt: 196 z-score: 223.5 E(): 4.7e-05%3B 27.0%25 identity in 293 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.21;product=dehydrogenase;protein_id=NP_626724.1;transl_table=11
NC_003888.3	RefSeq	gene	2673003	2673713	.	+	.	ID=gene2488;Dbxref=GeneID:1097917;Name=SC7A8.22;gbkey=Gene;gene=SC7A8.22;gene_biotype=protein_coding;gene_synonym=SC7A8.22;locus_tag=SCO2483
NC_003888.3	RefSeq	CDS	2673003	2673713	.	+	0	ID=cds2446;Parent=gene2488;Dbxref=Genbank:NP_626725.1,GeneID:1097917;Name=NP_626725.1;Note=SC7A8.22%2C possible hypothetical protein%2C len: 236 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.22;product=hypothetical protein;protein_id=NP_626725.1;transl_table=11
NC_003888.3	RefSeq	gene	2673743	2675029	.	+	.	ID=gene2489;Dbxref=GeneID:1097918;Name=SC7A8.23;gbkey=Gene;gene=SC7A8.23;gene_biotype=protein_coding;gene_synonym=SC7A8.23;locus_tag=SCO2484
NC_003888.3	RefSeq	CDS	2673743	2675029	.	+	0	ID=cds2447;Parent=gene2489;Dbxref=Genbank:NP_626726.1,GeneID:1097918;Name=NP_626726.1;Note=SC7A8.23%2C possible hypothetical protein%2C len: 428 aa%3B similar to TR:O86542 (EMBL:AL031350) Streptomyces coelicolor hypothetical protein SC1F2.05%2C 552 aa%3B fasta scores: opt: 440 z-score: 473.6 E(): 5.5e-19%3B 32.3%25 identity in 406 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.23;product=hypothetical protein;protein_id=NP_626726.1;transl_table=11
NC_003888.3	RefSeq	gene	2675087	2675869	.	-	.	ID=gene2490;Dbxref=GeneID:1097919;Name=SC7A8.24c;gbkey=Gene;gene=SC7A8.24c;gene_biotype=protein_coding;gene_synonym=SC7A8.24c;locus_tag=SCO2485
NC_003888.3	RefSeq	CDS	2675087	2675869	.	-	0	ID=cds2448;Parent=gene2490;Dbxref=Genbank:NP_626727.1,GeneID:1097919;Name=NP_626727.1;Note=SC7A8.24c%2C hypothetical protein%2C len: 242 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB54589 (EMBL:AJ249205) Vibrio cholerae hypothetical 27.3 kD protein%2C 261 aa%3B fasta scores: opt: 509 z-score: 568.8 E(): 2.7e-24%3B 35.5%25 identity in 256 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.24c;product=hypothetical protein;protein_id=NP_626727.1;transl_table=11
NC_003888.3	RefSeq	gene	2676046	2677278	.	+	.	ID=gene2491;Dbxref=GeneID:1097920;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;gene_synonym=nirB,SC7A8.25;locus_tag=SCO2486
NC_003888.3	RefSeq	CDS	2676046	2677278	.	+	0	ID=cds2449;Parent=gene2491;Dbxref=Genbank:NP_626728.1,GeneID:1097920;Name=NP_626728.1;Note=SC7A8.25%2C nirB%2C probable nitrite reductase%2C len: 410 aa%3B similar to N-terminal region of TR:O53674 (EMBL:AL021929) Mycobacterium tuberculosis nitrite reductase large subunit NirB%2C 853 aa%3B fasta scores: opt: 657 z-score: 711.6 E(): 3e-32%3B 37.8%25 identity in 431 aa overlap and to SW:NIRB_KLEPN (EMBL:L06800) Klebsiella pneumoniae nitrite reductase [NAD(P)H] large subunit (EC 1.6.6.4) NasB%2C 957 aa%3B fasta scores: opt: 636 z-score: 688.3 E(): 6e-3%3B 35.4%25 identity in 412 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=nirB;product=nitrite reductase NirB;protein_id=NP_626728.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2677267	2677271	.	+	.	ID=id3074;Dbxref=GeneID:1097920;gbkey=RBS;gene=nirB
NC_003888.3	RefSeq	gene	2677278	2679893	.	+	.	ID=gene2492;Dbxref=GeneID:1097921;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;gene_synonym=nirB,SC7A8.26;locus_tag=SCO2487
NC_003888.3	RefSeq	CDS	2677278	2679893	.	+	0	ID=cds2450;Parent=gene2492;Dbxref=Genbank:NP_626729.1,GeneID:1097921;Name=NP_626729.1;Note=SC7A8.26%2C nirB%2C probable nitrite reductase large subunit%2C len: 871 aa%3B similar to TR:Q00943 (EMBL:Z68122) Pichia angusta nitrite reductase Yni1%2C 1044 aa%3B fasta scores: opt: 1960 z-score: 2117.6 E(): 0%3B 43.2%25 identity in 868 aa overlap and SW:NIRB_ECOLI (EMBL:X14202) Escherichia coli nitrite reductase [NAD(P)H] large subunit (EC 1.6.6.4) NirB 847 aa%3B fasta scores:opt: 1609 z-score: 1739.1 E(): 0%3B 52.1%25 identity in 845 aa overlap. Contains Pfam match to entry PF01077 NIR_SIR%2C Nitrite and sulphite reductase and two matches to Prosite entries PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site and PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site;gbkey=CDS;gene=nirB;product=nitrite reductase large subunit NirB;protein_id=NP_626729.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2677713	2679626	.	+	.	ID=id3075;Dbxref=GeneID:1097921;Note=Pfam match to entry PF01077 NIR_SIR%2C Nitrite and sulphite reductase%2C score 773.30%2C E-value 9.5e-229;gbkey=misc_feature;gene=nirB
NC_003888.3	RefSeq	sequence_feature	2679174	2679209	.	+	.	ID=id3076;Dbxref=GeneID:1097921;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=nirB
NC_003888.3	RefSeq	sequence_feature	2679357	2679407	.	+	.	ID=id3077;Dbxref=GeneID:1097921;Note=PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site;gbkey=misc_feature;gene=nirB
NC_003888.3	RefSeq	gene	2679896	2680291	.	+	.	ID=gene2493;Dbxref=GeneID:1097922;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;gene_synonym=nirC,SC7A8.27;locus_tag=SCO2488
NC_003888.3	RefSeq	CDS	2679896	2680291	.	+	0	ID=cds2451;Parent=gene2493;Dbxref=Genbank:NP_626730.1,GeneID:1097922;Name=NP_626730.1;Note=SC7A8.27%2C nirC%2C probable nitrite reductase small subunit%2C len: 131 aa%3B similar to TR:O53675 (EMBL:AL021929) Mycobacterium tuberculosis nitrite reductase small subunit NirD%2C 118 aa%3B fasta scores: opt: 353 z-score: 455.1 E(): 5.9e-18%3B 56.5%25 identity in 92 aa overlap and to SW:NIRD_ECOLI (EMBL:X14202) Escherichia coli nitrite reductase [NAD(P)H] small subunit (EC 1.6.6.4) NirD%2C 108 aa%3B fasta scores: opt: 265 z-score: 346.0 E(): 7e-12%3B 46.9%25 identity in 96 aa overlap;gbkey=CDS;gene=nirC;product=nitrite reductase small subunit NirC;protein_id=NP_626730.1;transl_table=11
NC_003888.3	RefSeq	gene	2680340	2680924	.	+	.	ID=gene2494;Dbxref=GeneID:1097923;Name=SC7A8.28;gbkey=Gene;gene=SC7A8.28;gene_biotype=protein_coding;gene_synonym=SC7A8.28;locus_tag=SCO2489
NC_003888.3	RefSeq	CDS	2680340	2680924	.	+	0	ID=cds2452;Parent=gene2494;Dbxref=Genbank:NP_626731.1,GeneID:1097923;Name=NP_626731.1;Note=SC7A8.28%2C probable tetR-family transcriptional regulator%2C len: 194 aa%3B similar to TR:CAB53122 (EMBL:AL109962) Streptomyces coelicolor transcriptional regulatory protein SCJ1.04%2C aa%3B fasta scores: opt: 184 z-score: 231.2 E(): 1.7e-05%3B 30.9%25 identity in 162 aa overlap and to SW:YCFQ_ECOLI (EMBL:AE000211) Escherichia coli hypothetical transcriptional regulator in NDH-MFD intergenic region YcfQ%2C 210 aa%3B fasta scores: opt: 282 z-score: 348.3 E(): 5.2e-12%3B 32.3%25 identity in 192 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 28..49 (+3.04 SD);gbkey=CDS;gene=SC7A8.28;product=TetR family transcriptional regulator;protein_id=NP_626731.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2680373	2680513	.	+	.	ID=id3078;Dbxref=GeneID:1097923;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 36.90%2C E-value 1.7e-08;gbkey=misc_feature;gene=SC7A8.28
NC_003888.3	RefSeq	ribosome_entry_site	2680997	2681000	.	+	.	ID=id3079;gbkey=RBS
NC_003888.3	RefSeq	gene	2681005	2681772	.	+	.	ID=gene2495;Dbxref=GeneID:1097924;Name=SC7A8.29;gbkey=Gene;gene=SC7A8.29;gene_biotype=protein_coding;gene_synonym=SC7A8.29;locus_tag=SCO2490
NC_003888.3	RefSeq	CDS	2681005	2681772	.	+	0	ID=cds2453;Parent=gene2495;Dbxref=Genbank:NP_626732.1,GeneID:1097924;Name=NP_626732.1;Note=SC7A8.29%2C probable dehydrogenase (hypothetical protein)%2C len: 255 aa%3B similar to TR:O88068 (EMBL:AL031541) Streptomyces coelicolor dehydrogenase SCI35.33c%2C 260 aa%3B fasta scores: opt: 536 z-score: 554.4 E(): 1.7e-23%3B 40.0%25 identity in 255 aa overlap and to SW:DHG2_BACSU (EMBL:AB000617)Bacillus subtilis glucose 1-dehydrogenase II (EC 1.1.1.47) (GlcDH-II) (Gdh-II) (general stress protein 74) (Gsp74) YcdF%2C 258 aa%3B fasta scores: opt: 566 z-score: 584.7 E(): 3.5e-25%3B 39.3%25 identity in 252 aa overlap Contains two Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7A8.29;product=dehydrogenase;protein_id=NP_626732.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2681029	2681592	.	+	.	ID=id3080;Dbxref=GeneID:1097924;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 225.90%2C E-value 5.9e-64;gbkey=misc_feature;gene=SC7A8.29
NC_003888.3	RefSeq	sequence_feature	2681659	2681751	.	+	.	ID=id3081;Dbxref=GeneID:1097924;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 30.70%2C E-value 3.4e-05;gbkey=misc_feature;gene=SC7A8.29
NC_003888.3	RefSeq	gene	2681817	2682749	.	-	.	ID=gene2496;Dbxref=GeneID:1097925;Name=SC7A8.30c;gbkey=Gene;gene=SC7A8.30c;gene_biotype=protein_coding;gene_synonym=SC7A8.30c;locus_tag=SCO2491
NC_003888.3	RefSeq	CDS	2681817	2682749	.	-	0	ID=cds2454;Parent=gene2496;Dbxref=Genbank:NP_626733.1,GeneID:1097925;Name=NP_626733.1;Note=SC7A8.30c%2C probable oxidoreductase%2C len: 310 aa%3B similar to TR:O53726 (EMBL:AL021932) Mycobacterium tuberculosis oxidoreductase MTV037.03c%2C 311 aa%3B fasta scores: opt: 827 z-score: 914.1 E(): 0%3B 49.3%25 identity in 306 aa overlap%2C to SW:OXIR_STRAT (EMBL:M96551) Streptomyces antibioticus probable oxidoreductase (EC 1.-.-.-)%2C 298 aa%3B fasta scores: opt: 427 z-score: 476.5 E(): 3.7e-19%3B 37.2%25 identity in 293 aa overlap and to S. coelicolor SCJ9A.19c%2C 311 aa%3B fasta scores: opt: 729 z-score: 645.5 E(): 1.5e-30%3B 44.5%25 identity in 310 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=SC7A8.30c;product=oxidoreductase;protein_id=NP_626733.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2682111	2682707	.	-	.	ID=id3082;Dbxref=GeneID:1097925;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 115.40%2C E-value 1.1e-30;gbkey=misc_feature;gene=SC7A8.30c
NC_003888.3	RefSeq	ribosome_entry_site	2682756	2682759	.	-	.	ID=id3083;gbkey=RBS
NC_003888.3	RefSeq	gene	2682933	2683406	.	+	.	ID=gene2497;Dbxref=GeneID:1097926;Name=SC7A8.31;gbkey=Gene;gene=SC7A8.31;gene_biotype=protein_coding;gene_synonym=SC7A8.31;locus_tag=SCO2492
NC_003888.3	RefSeq	CDS	2682933	2683406	.	+	0	ID=cds2455;Parent=gene2497;Dbxref=Genbank:NP_626734.1,GeneID:1097926;Name=NP_626734.1;Note=SC7A8.31%2C possible membrane protein%2C len: 157 aa. Contains possible N-terminal region signal peptide sequence and C-terminal region possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC7A8.31;product=hypothetical protein;protein_id=NP_626734.1;transl_table=11
NC_003888.3	RefSeq	gene	2683469	2684677	.	-	.	ID=gene2498;Dbxref=GeneID:1097927;Name=SC7A8.32c;gbkey=Gene;gene=SC7A8.32c;gene_biotype=protein_coding;gene_synonym=SC7A8.32c;locus_tag=SCO2493
NC_003888.3	RefSeq	CDS	2683469	2684677	.	-	0	ID=cds2456;Parent=gene2498;Dbxref=Genbank:NP_626735.1,GeneID:1097927;Name=NP_626735.1;Note=SC7A8.32c%2C probable membrane protein%2C len: 402 aa%3B similar to TR:Q9WX28 (EMBL:AL079345) Streptomyces coelicolor  membrane protein SCE68.03%2C 441 aa%3B fasta scores: opt: 1057 z-score: 1265.9 E(): 0%3B 44.8%25 identity in 384 aa overlap and SW:MDMB_STRMY (EMBL:M93958) Streptomyces mycarofaciens acyltransferase (EC 2.3.1.-) MdmB%2C 387 aa%3B fasta scores: opt: 211 z-score: 255.4 E(): 7.8e-07%3B 25.6%25 identity in 406 aa overlap;gbkey=CDS;gene=SC7A8.32c;product=hypothetical protein;protein_id=NP_626735.1;transl_table=11
NC_003888.3	RefSeq	gene	2684904	2687633	.	-	.	ID=gene2499;Dbxref=GeneID:1097928;Name=SC7A8.33c;gbkey=Gene;gene=SC7A8.33c;gene_biotype=protein_coding;gene_synonym=SC7A8.33c;locus_tag=SCO2494
NC_003888.3	RefSeq	CDS	2684904	2687633	.	-	0	ID=cds2457;Parent=gene2499;Dbxref=Genbank:NP_626736.1,GeneID:1097928;Name=NP_626736.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=SC7A8.33c;product=pyruvate phosphate dikinase;protein_id=NP_626736.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2685045	2686010	.	-	.	ID=id3084;Dbxref=GeneID:1097928;Note=Pfam match to entry PF00391 PEP-utilizers%2C PEP-utilizing enzymes%2C score 324.50%2C E-value 1.2e-93;gbkey=misc_feature;gene=SC7A8.33c
NC_003888.3	RefSeq	sequence_feature	2686077	2686340	.	-	.	ID=id3085;Dbxref=GeneID:1097928;Note=Pfam match to entry PF00391 PEP-utilizers%2C PEP-utilizing enzymes%2C score 85.20%2C E-value 5.7e-24;gbkey=misc_feature;gene=SC7A8.33c
NC_003888.3	RefSeq	sequence_feature	2686230	2686265	.	-	.	ID=id3086;Dbxref=GeneID:1097928;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature;gbkey=misc_feature;gene=SC7A8.33c
NC_003888.3	RefSeq	sequence_feature	2686509	2687594	.	-	.	ID=id3087;Dbxref=GeneID:1097928;Note=Pfam match to entry PF01326 PPDK_N_term%2C Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain%2C score 431.00%2C E-value 1e-125;gbkey=misc_feature;gene=SC7A8.33c
NC_003888.3	RefSeq	ribosome_entry_site	2687643	2687648	.	-	.	ID=id3088;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2688103	2688107	.	+	.	ID=id3089;gbkey=RBS
NC_003888.3	RefSeq	gene	2688116	2689894	.	+	.	ID=gene2500;Dbxref=GeneID:1097929;Name=SC7A8.34;gbkey=Gene;gene=SC7A8.34;gene_biotype=protein_coding;gene_synonym=SC7A8.34,SCC82.01;locus_tag=SCO2495
NC_003888.3	RefSeq	CDS	2688116	2689894	.	+	0	ID=cds2458;Parent=gene2500;Dbxref=Genbank:NP_733573.1,GeneID:1097929;Name=NP_733573.1;Note=SCC82.01%2C unknownm len: >83 aa~SC7A8.34%2C possible membrane protein (fragment)%2C len: >541 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7A8.34;product=hypothetical protein;protein_id=NP_733573.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2690002	2690006	.	+	.	ID=id3090;gbkey=RBS
NC_003888.3	RefSeq	gene	2690016	2690456	.	+	.	ID=gene2501;Dbxref=GeneID:1097930;Name=SCC82.02;gbkey=Gene;gene=SCC82.02;gene_biotype=protein_coding;gene_synonym=SCC82.02;locus_tag=SCO2496
NC_003888.3	RefSeq	CDS	2690016	2690456	.	+	0	ID=cds2459;Parent=gene2501;Dbxref=Genbank:NP_626737.1,GeneID:1097930;Name=NP_626737.1;Note=SCC82.02%2C possible hypothetical protein%2C len: 146 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC82.02;product=hypothetical protein;protein_id=NP_626737.1;transl_table=11
NC_003888.3	RefSeq	gene	2690476	2691696	.	-	.	ID=gene2502;Dbxref=GeneID:1097931;Name=SCC82.03c;gbkey=Gene;gene=SCC82.03c;gene_biotype=protein_coding;gene_synonym=SCC82.03c;locus_tag=SCO2497
NC_003888.3	RefSeq	CDS	2690476	2691696	.	-	0	ID=cds2460;Parent=gene2502;Dbxref=Genbank:NP_626738.1,GeneID:1097931;Name=NP_626738.1;Note=SCC82.03c%2C hypothetical protein%2C len: 406 aa%3B similar to varous hypothetical proteins%2C e.g. SW:Y823_MYCTU (EMBL:AL022004) Mycobacterium tuberculosis hypothetical 41.4 kD protein RV0823c%2C 389 aa%3B fasta scores: opt: 1153 z-score: 1349.3 E(): 0%3B 56.2%25 identity in 406 aa overlap. Contains Pfam match to entry PF01207 UPF0034%2C Uncharacterized protein family UPF0034 and match to Prosite entry PS01136 Uncharacterized protein family UPF0034 signature;gbkey=CDS;gene=SCC82.03c;product=hypothetical protein;protein_id=NP_626738.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2690596	2691615	.	-	.	ID=id3091;Dbxref=GeneID:1097931;Note=Pfam match to entry PF01207 UPF0034%2C Uncharacterized protein family UPF0034%2C score 342.80%2C E-value 3.7e-99;gbkey=misc_feature;gene=SCC82.03c
NC_003888.3	RefSeq	sequence_feature	2691307	2691363	.	-	.	ID=id3092;Dbxref=GeneID:1097931;Note=PS01136 Uncharacterized protein family UPF0034 signature;gbkey=misc_feature;gene=SCC82.03c
NC_003888.3	RefSeq	ribosome_entry_site	2691798	2691801	.	+	.	ID=id3093;gbkey=RBS
NC_003888.3	RefSeq	gene	2691805	2693250	.	+	.	ID=gene2503;Dbxref=GeneID:1097932;Name=SCC121.01;gbkey=Gene;gene=SCC121.01;gene_biotype=protein_coding;gene_synonym=SCC121.01,SCC82.04;locus_tag=SCO2498
NC_003888.3	RefSeq	CDS	2691805	2693250	.	+	0	ID=cds2461;Parent=gene2503;Dbxref=Genbank:NP_733574.1,GeneID:1097932;Name=NP_733574.1;Note=SCC121.01%2C probable efflux membrane protein%2C len: >344 aa%3B similar to SW:TCMA_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA%2C 538 aa%3B fasta scores: opt: 654 z-score: 718.1 E(): 1.3e-32%3B 38.7%25 identity in 305 aa overlap~SCC82.04%2C possible efflux protein%2C len: >168 aa%3B similar to TR:CAB55652 (EMBL:AL117385) Streptomyces coelicolor transmembrane efflux protein%2C SC5G9.04c%2C 489 aa%3B fasta scores: opt: 564 z-score: 675.1 E(): 3.3e-30%3B 46.9%25 identity in 160 aa overlap and to SW:PUR8_STRLP (EMBL:X76855) Streptomyces lipmanii (Streptomyces alboniger)puromycin resistance protein Pur8%2C 503 aa%3B fasta scores: opt: 454 z-score: 544.8 E(): 5.9e-23%3B 44.7%25 identity in 159 aa overlap. Contains N-terminal region signal peptide sequence and match to Prosite entry PS00216 Sugar transport proteins signature 1;gbkey=CDS;gene=SCC121.01;product=efflux protein;protein_id=NP_733574.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2692000	2692050	.	+	.	ID=id3094;Dbxref=GeneID:1097932;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCC121.01
NC_003888.3	RefSeq	gene	2693290	2697708	.	-	.	ID=gene2504;Dbxref=GeneID:1097933;Name=SCC121.02c;gbkey=Gene;gene=SCC121.02c;gene_biotype=protein_coding;gene_synonym=SCC121.02c;locus_tag=SCO2499
NC_003888.3	RefSeq	CDS	2693290	2697708	.	-	0	ID=cds2462;Parent=gene2504;Dbxref=Genbank:NP_626739.1,GeneID:1097933;Name=NP_626739.1;Note=SCC121.02c%2C possible transport ATPase%2C len: 1472 aa%3B similar to TR:P96271 (EMBL:Z84724) Mycobacterium tuberculosis hypothetical 159.8 kD protein MTCY22G10.22c%2C 1539 aa%3B fasta scores: opt: 2216 z-score: 2157.1 E(): 0%3B 38.4%25 identity in 1543 aa overlap and N-terminal region similar to SW:ATMA_SALTY (EMBL:U07843) Salmonella typhimurium Mg(2+) transport atpase%2C P-type 1 (EC 3.6.1.-) MgtA%2C 902 aa%3B fasta scores: opt: 800 z-score: 779.8 E(): 0 %3B28.0%25 identity in 880 aa overlap. Contains Pfam match to entry PF00122 E1-E2_ATPase%2C match to Prosite entry PS00154 E1-E2 ATPases phosphorylation site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC121.02c;product=transport ATPase;protein_id=NP_626739.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2693761	2695641	.	-	.	ID=id3095;Dbxref=GeneID:1097933;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C %2C score 401.30%2C E-value 9.1e-117;gbkey=misc_feature;gene=SCC121.02c
NC_003888.3	RefSeq	sequence_feature	2694862	2694882	.	-	.	ID=id3096;Dbxref=GeneID:1097933;Note=PS00154 E1-E2 ATPases phosphorylation site;gbkey=misc_feature;gene=SCC121.02c
NC_003888.3	RefSeq	ribosome_entry_site	2697711	2697716	.	-	.	ID=id3097;gbkey=RBS
NC_003888.3	RefSeq	gene	2697734	2698408	.	+	.	ID=gene2505;Dbxref=GeneID:1097934;Name=SCC121.03;gbkey=Gene;gene=SCC121.03;gene_biotype=protein_coding;gene_synonym=SCC121.03;locus_tag=SCO2500
NC_003888.3	RefSeq	CDS	2697734	2698408	.	+	0	ID=cds2463;Parent=gene2505;Dbxref=Genbank:NP_626740.1,GeneID:1097934;Name=NP_626740.1;Note=SCC121.03%2C possible membrane protein%2C len: 142 aa;gbkey=CDS;gene=SCC121.03;product=hypothetical protein;protein_id=NP_626740.1;transl_table=11
NC_003888.3	RefSeq	gene	2698679	2699575	.	-	.	ID=gene2506;Dbxref=GeneID:1097935;Name=SCC121.04c;gbkey=Gene;gene=SCC121.04c;gene_biotype=protein_coding;gene_synonym=SCC121.04c;locus_tag=SCO2501
NC_003888.3	RefSeq	CDS	2698679	2699575	.	-	0	ID=cds2464;Parent=gene2506;Dbxref=Genbank:NP_626741.1,GeneID:1097935;Name=NP_626741.1;Note=SCC121.04c%2C possible DNA-binding protein%2C len: 298 aa%3B similar to TR:CAB52924 (EMBL:AL109949) Streptomyces coelicolor  DNA-binding protein SCJ11.39c%2C 279 aa%3B fasta scores: opt: 713 z-score: 847.3 E(): 0%3B 44.0%25 identity in 266 aa overlap and to TR:CAB53273 (EMBL:AL109972) Streptomyces coelicolor DNA-binding protein SCJ9A.12c%2C 279 aa%3B fasta scores: opt: 416 z-score: 497.4 E(): 2.6e-20%3B 35.1%25 identity in 276 aa overlap;gbkey=CDS;gene=SCC121.04c;product=DNA-binding protein;protein_id=NP_626741.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2699586	2699590	.	-	.	ID=id3098;gbkey=RBS
NC_003888.3	RefSeq	gene	2699686	2701119	.	+	.	ID=gene2507;Dbxref=GeneID:1097936;Name=SCC121.05;gbkey=Gene;gene=SCC121.05;gene_biotype=protein_coding;gene_synonym=SCC121.05;locus_tag=SCO2502
NC_003888.3	RefSeq	CDS	2699686	2701119	.	+	0	ID=cds2465;Parent=gene2507;Dbxref=Genbank:NP_626742.1,GeneID:1097936;Name=NP_626742.1;Note=SCC121.05%2C probable transport protein%2C len: 477 aa%3B similar to SW:AC22_STRCO (EMBL:M64683) Streptomyces coelicolor probable actinorhodin transporter ActII-2%2C 578 aa%3B fasta scores: opt: 902 z-score: 985.8 E(): 0%3B 36.6%25 identity in 437 aa overlap and to SW:PUR8_STRLP (EMBL:X76855) Streptomyces lipmanii (Streptomyces alboniger) Puromycin resistance protein Pur8%2C 503 aa%3B fasta scores: opt: 700 z-score: 766.7 E(): 0%3B 34.1%25 identity in 440 aa overlap;gbkey=CDS;gene=SCC121.05;product=transporter;protein_id=NP_626742.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2701231	2701235	.	+	.	ID=id3099;gbkey=RBS
NC_003888.3	RefSeq	gene	2701242	2702318	.	+	.	ID=gene2508;Dbxref=GeneID:1097937;Name=SCC121.06;gbkey=Gene;gene=SCC121.06;gene_biotype=protein_coding;gene_synonym=SCC121.06;locus_tag=SCO2503
NC_003888.3	RefSeq	CDS	2701242	2702318	.	+	0	ID=cds2466;Parent=gene2508;Dbxref=Genbank:NP_626743.1,GeneID:1097937;Name=NP_626743.1;Note=SCC121.06%2C probable chitinase precursor%2C len: 358 aa%3B similar to C-terminal region of SW:CHID_BACCI (EMBL:D10594) Bacillus circulans chitinase D precursor (EC 3.2.1.14) ChiD%2C 497 aa%3B fasta scores: opt: 471 z-score: 502.4 E(): 1.4e-20%3B 33.0%25 identity in 370 aa overlap and to SW:CHIX_STROI (EMBL:X71080) Streptomyces olivaceoviridis (Streptomyces corchorusii exochitinase 1 precursor (EC 3.2.1.14) Chi01%2C 597 aa%3B fasta scores: opt: 249 z-score: 267.3 E(): 1.7e-07%3B 31.2%25 identity in 391 aa overlap. Contains Pfam match to entry PF00704 Glyco_hydro_18 and match to Prosite enry PS01095 Chitinases family 18 active site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC121.06;product=chitinase;protein_id=NP_626743.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2701692	2701757	.	+	.	ID=id3100;Dbxref=GeneID:1097937;Note=Pfam match to entry PF00704 Glyco_hydro_18%2C %2C score 18.00%2C E-value 9.2e-05;gbkey=misc_feature;gene=SCC121.06
NC_003888.3	RefSeq	sequence_feature	2701737	2701763	.	+	.	ID=id3101;Dbxref=GeneID:1097937;Note=PS01095 Chitinases family 18 active site;gbkey=misc_feature;gene=SCC121.06
NC_003888.3	RefSeq	gene	2702461	2703843	.	-	.	ID=gene2509;Dbxref=GeneID:1097938;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;gene_synonym=glyS,SCC121.07c;locus_tag=SCO2504
NC_003888.3	RefSeq	CDS	2702461	2703843	.	-	0	ID=cds2467;Parent=gene2509;Dbxref=Genbank:NP_626744.1,GeneID:1097938;Name=NP_626744.1;Note=Catalyzes a two-step reaction%2C first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycyl-tRNA synthetase;protein_id=NP_626744.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2702518	2703585	.	-	.	ID=id3102;Dbxref=GeneID:1097938;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C %2C score -0.10%2C E-value 0.0015;gbkey=misc_feature;gene=glyS
NC_003888.3	RefSeq	sequence_feature	2703205	2703267	.	-	.	ID=id3103;Dbxref=GeneID:1097938;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1;gbkey=misc_feature;gene=glyS
NC_003888.3	RefSeq	ribosome_entry_site	2703848	2703852	.	-	.	ID=id3104;gbkey=RBS
NC_003888.3	RefSeq	gene	2704004	2704990	.	+	.	ID=gene2510;Dbxref=GeneID:1097939;Name=SCC121.08;gbkey=Gene;gene=SCC121.08;gene_biotype=protein_coding;gene_synonym=SCC121.08;locus_tag=SCO2505
NC_003888.3	RefSeq	CDS	2704004	2704990	.	+	0	ID=cds2468;Parent=gene2510;Dbxref=Genbank:NP_626745.1,GeneID:1097939;Name=NP_626745.1;Note=SCC121.08%2C probable ABC-transporter metal-binding lipoprotein%2C len: 328 aa%3B similar to TR:O05703 (EMBL:Z71552) Streptococcus pneumoniae AdcA protein (fragment)%2C 423 aa%3B fasta scores: opt: 551 z-score: 603.5 E(): 3.2e-26%3B 39.7%25 identity in 305 aa overlap and to SW:ZNUA_ECOLI (EMBL:U38702) Escherichia coli%2C high-affinity zinc uptake system protein ZnuA precursor ZnuA%2C 328 aa%3B fasta scores: opt: 294 z-score: 327.0 E(): 8e-11%3B 26.5%25 identity in 283 aa overlap. Contains Pfam match to entry PF01297 Lipoprotein_4 and match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC121.08;product=ABC-transporter metal-binding lipoprotein;protein_id=NP_626745.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2704046	2704981	.	+	.	ID=id3105;Dbxref=GeneID:1097939;Note=Pfam match to entry PF01297 Lipoprotein_4%2C %2C score 232.90%2C E-value 4.5e-66;gbkey=misc_feature;gene=SCC121.08
NC_003888.3	RefSeq	sequence_feature	2704052	2704084	.	+	.	ID=id3106;Dbxref=GeneID:1097939;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCC121.08
NC_003888.3	RefSeq	sequence_feature	2704940	2704963	.	+	.	ID=id3107;Dbxref=GeneID:1097939;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=SCC121.08
NC_003888.3	RefSeq	ribosome_entry_site	2705042	2705046	.	+	.	ID=id3108;gbkey=RBS
NC_003888.3	RefSeq	gene	2705052	2705822	.	+	.	ID=gene2511;Dbxref=GeneID:1097940;Name=SCC121.09;gbkey=Gene;gene=SCC121.09;gene_biotype=protein_coding;gene_synonym=SCC121.09;locus_tag=SCO2506
NC_003888.3	RefSeq	CDS	2705052	2705822	.	+	0	ID=cds2469;Parent=gene2511;Dbxref=Genbank:NP_626746.1,GeneID:1097940;Name=NP_626746.1;Note=SCC121.09%2C probable metal transport ABC transporter%2C len: 256 aa%3B similar to TR:Q9XDA6 (EMBL:AF104349) Listeria monocytogenes ABC transporter ZurA%2C 257aa%3B fasta scores: opt: 468 z-score: 522.7 E(): 1e-21%3B 38.0%25 identity in 237 aa overlap and to SW:FHUC_ECOLI (EMBLX05810:) Escherichia coli ferrichrome transport ATP-binding protein FhuC%2C 265 aa%3B fasta scores: opt: 416 z-score: 465.6 E(): 1.5e-18%3B 34.8%25 identity in 256 aa overlap. Contains Pfam match to entry PF00005 ABC_tran and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCC121.09;product=metal transport ABC transporter;protein_id=NP_626746.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2705145	2705699	.	+	.	ID=id3109;Dbxref=GeneID:1097940;Note=Pfam match to entry PF00005 ABC_tran%2C %2C score 155.70%2C E-value 8e-43;gbkey=misc_feature;gene=SCC121.09
NC_003888.3	RefSeq	sequence_feature	2705166	2705189	.	+	.	ID=id3110;Dbxref=GeneID:1097940;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC121.09
NC_003888.3	RefSeq	gene	2705836	2706738	.	+	.	ID=gene2512;Dbxref=GeneID:1097941;Name=SCC121.10;gbkey=Gene;gene=SCC121.10;gene_biotype=protein_coding;gene_synonym=SCC121.10;locus_tag=SCO2507
NC_003888.3	RefSeq	CDS	2705836	2706738	.	+	0	ID=cds2470;Parent=gene2512;Dbxref=Genbank:NP_626747.1,GeneID:1097941;Name=NP_626747.1;Note=SCC121.10%2C probable metal transport ABC transporter%2C len: 300 aa%3B similar to TR:Q9XDA5 (EMBLAF104349:) Listeria monocytogenes hydrophobic membrane protein ZurM%2C 295aa fasta scores: opt: 608 z-score: 697.8 E(): 1.8e-31%3B 34.7%25 identity in 288 aa overlap and to SW:ZNUB_ECOLI (EMBL:AE000280) Escherichia coli high-affinity Zinc uptake system membrane protein ZnuB%2C 261 aa%3B fasta scores: opt: 397 z-score: 459.6 E(): 3.3e-18%3B 27.3%25 identity in 245 aa overlap. Contains Pfam match to entry PF00950 ABC-3;gbkey=CDS;gene=SCC121.10;product=metal transport ABC transporter;protein_id=NP_626747.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2705848	2706624	.	+	.	ID=id3111;Dbxref=GeneID:1097941;Note=Pfam match to entry PF00950 ABC-3%2C %2C score 249.90%2C E-value 3.4e-71;gbkey=misc_feature;gene=SCC121.10
NC_003888.3	RefSeq	ribosome_entry_site	2706790	2706794	.	+	.	ID=id3112;gbkey=RBS
NC_003888.3	RefSeq	gene	2706801	2707220	.	+	.	ID=gene2513;Dbxref=GeneID:1097942;Name=SCC121.11;gbkey=Gene;gene=SCC121.11;gene_biotype=protein_coding;gene_synonym=SCC121.11;locus_tag=SCO2508
NC_003888.3	RefSeq	CDS	2706801	2707220	.	+	0	ID=cds2471;Parent=gene2513;Dbxref=Genbank:NP_626748.1,GeneID:1097942;Name=NP_626748.1;Note=SCC121.11%2C probable metal uptake regulation protein%2C len: 139 aa%3B similar to TR:O05839 (EMBL:Z95208) Mycobacterium tuberculosis cosmid Y27 Fur%2C 130 aa%3B fasta scores: opt: 546 z-score: 663.0 E(): 1.5e-29%3B 61.8%25 identity in 123 aa overlap and to SW:FUR_NEIGO (EMBL:L11361) Neisseria gonorrhoeae ferric uptake regulation protein (ferric uptake regulator) Fur%2C 144 aa%3B fasta scores: opt: 273 z-score: 339.0 E(): 1.7e-11%3B 35.5%25 identity in 110 aa overlap. Contains Pfam match to entry PF01475 FUR;gbkey=CDS;gene=SCC121.11;product=metal uptake regulation protein;protein_id=NP_626748.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2706831	2707181	.	+	.	ID=id3113;Dbxref=GeneID:1097942;Note=Pfam match to entry PF01475 FUR%2C %2C score 147.50%2C E-value 2.4e-40;gbkey=misc_feature;gene=SCC121.11
NC_003888.3	RefSeq	gene	2707331	2708164	.	-	.	ID=gene2514;Dbxref=GeneID:1097943;Name=SCC121.12c;gbkey=Gene;gene=SCC121.12c;gene_biotype=protein_coding;gene_synonym=SCC121.12c,uppS;locus_tag=SCO2509
NC_003888.3	RefSeq	CDS	2707331	2708164	.	-	0	ID=cds2472;Parent=gene2514;Dbxref=Genbank:NP_626749.1,GeneID:1097943;Name=NP_626749.1;Note=SCC121.12c%2C uppS%2C UDP phosphate synthetase%2C len: 277 aa%3B similar to SW:UPPS_MYCTU (EMBL:Z95208) Mycobacterium tuberculosis UDP pyrophosphate synthetase (EC 2.5.1.31) (Upp synthetase) UppS%2C 296 aa%3B fasta scores: opt: 1144 z-score: 1315.8 E(): 0%3B 63.6%25 identity in 247 aa overlap and to SW:UPPS_ECOLI (EMBL:D83536) Escherichia coli UDP pyrophosphate synthetase (EC 2.5.1.31) (Upp synthetase) UppS%2C 253 aa%3B fasta scores: opt: 642 z-score: 743.0 E(): 0%3B 43.1%25 identity in 232 aa overlap. Contains Pfam match to entry PF01255 UPF0015;gbkey=CDS;gene=SCC121.12c;product=UDP phosphate synthetase;protein_id=NP_626749.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2707382	2708047	.	-	.	ID=id3114;Dbxref=GeneID:1097943;Note=Pfam match to entry PF01255 UPF0015%2C %2C score 395.60%2C E-value 4.8e-115;gbkey=misc_feature;gene=SCC121.12c
NC_003888.3	RefSeq	ribosome_entry_site	2708172	2708177	.	-	.	ID=id3115;gbkey=RBS
NC_003888.3	RefSeq	gene	2708177	2708932	.	-	.	ID=gene2515;Dbxref=GeneID:1097944;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;gene_synonym=SCC121.13c;locus_tag=SCO2510
NC_003888.3	RefSeq	CDS	2708177	2708932	.	-	0	ID=cds2473;Parent=gene2515;Dbxref=Genbank:NP_626750.1,GeneID:1097944;Name=NP_626750.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=NP_626750.1;transl_table=11
NC_003888.3	RefSeq	gene	2708946	2709167	.	-	.	ID=gene2516;Dbxref=GeneID:1097945;Name=SCC121.14c;gbkey=Gene;gene=SCC121.14c;gene_biotype=protein_coding;gene_synonym=SCC121.14c;locus_tag=SCO2511
NC_003888.3	RefSeq	CDS	2708946	2709167	.	-	0	ID=cds2474;Parent=gene2516;Dbxref=Genbank:NP_626751.1,GeneID:1097945;Name=NP_626751.1;Note=SCC121.14c%2C unknown%2C len: 73 aa;gbkey=CDS;gene=SCC121.14c;product=hypothetical protein;protein_id=NP_626751.1;transl_table=11
NC_003888.3	RefSeq	gene	2709164	2709370	.	-	.	ID=gene2517;Dbxref=GeneID:1097946;Name=SCC121.15c;gbkey=Gene;gene=SCC121.15c;gene_biotype=protein_coding;gene_synonym=SCC121.15c;locus_tag=SCO2512
NC_003888.3	RefSeq	CDS	2709164	2709370	.	-	0	ID=cds2475;Parent=gene2517;Dbxref=Genbank:NP_626752.1,GeneID:1097946;Name=NP_626752.1;Note=SCC121.15c%2C unknown%2C len: 68 aa;gbkey=CDS;gene=SCC121.15c;product=hypothetical protein;protein_id=NP_626752.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2709378	2709383	.	-	.	ID=id3116;gbkey=RBS
NC_003888.3	RefSeq	gene	2709485	2710318	.	+	.	ID=gene2518;Dbxref=GeneID:1097947;Name=SCC121.16;gbkey=Gene;gene=SCC121.16;gene_biotype=protein_coding;gene_synonym=SCC121.16;locus_tag=SCO2513
NC_003888.3	RefSeq	CDS	2709485	2710318	.	+	0	ID=cds2476;Parent=gene2518;Dbxref=Genbank:NP_626753.1,GeneID:1097947;Name=NP_626753.1;Note=SCC121.16%2C hypothetical protein%2C len: 277 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q9X8M2 (EMBL:AL049628) Streptomyces coelicolor hypothetical 31.5 kD protein SCE94.16c%2C 280 aa%3B fasta scores: opt: 538 z-score: 655.5 E(): 4.1e-29%3B 37.1%25 identity in 259 aa overlap;gbkey=CDS;gene=SCC121.16;product=hypothetical protein;protein_id=NP_626753.1;transl_table=11
NC_003888.3	RefSeq	gene	2710300	2710590	.	+	.	ID=gene2519;Dbxref=GeneID:1097948;Name=SCC121.17;gbkey=Gene;gene=SCC121.17;gene_biotype=protein_coding;gene_synonym=SCC121.17;locus_tag=SCO2514
NC_003888.3	RefSeq	CDS	2710300	2710590	.	+	0	ID=cds2477;Parent=gene2519;Dbxref=Genbank:NP_626754.1,GeneID:1097948;Name=NP_626754.1;Note=SCC121.17%2C hypothetical protein%2C len: 96 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q9Z544 (EMBL:AL035212) Streptomyces coelicolor hypothetical 8.2 kD protein SC9B2.15c%2C 77 aa%3B fasta scores: opt: 230 z-score: 304.4 E(): 1.5e-09%3B 48.1%25 identity in 79 aa overlap;gbkey=CDS;gene=SCC121.17;product=hypothetical protein;protein_id=NP_626754.1;transl_table=11
NC_003888.3	RefSeq	gene	2710619	2711158	.	+	.	ID=gene2520;Dbxref=GeneID:1097949;Name=SCC121.18;gbkey=Gene;gene=SCC121.18;gene_biotype=protein_coding;gene_synonym=SCC121.18;locus_tag=SCO2515
NC_003888.3	RefSeq	CDS	2710619	2711158	.	+	0	ID=cds2478;Parent=gene2520;Dbxref=Genbank:NP_626755.1,GeneID:1097949;Name=NP_626755.1;Note=SCC121.18%2C possible lipoprotein%2C len: 179 aa%3B similar to TR:O86780 (EMBL:AL031317) Streptomyces coelicolor lipoprotein SC6Ga.17%2C 268 aa%3B fasta scores: opt: 145 z-score: 162.0 E(): 0.12%3B 32.1%25 identity in 134 aa overlap. Contains match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC121.18;product=lipoprotein;protein_id=NP_626755.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2710655	2710687	.	+	.	ID=id3117;Dbxref=GeneID:1097949;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCC121.18
NC_003888.3	RefSeq	ribosome_entry_site	2711241	2711244	.	+	.	ID=id3118;gbkey=RBS
NC_003888.3	RefSeq	gene	2711253	2712752	.	+	.	ID=gene2521;Dbxref=GeneID:1097950;Name=SCC121.19;gbkey=Gene;gene=SCC121.19;gene_biotype=protein_coding;gene_synonym=SCC121.19;locus_tag=SCO2516
NC_003888.3	RefSeq	CDS	2711253	2712752	.	+	0	ID=cds2479;Parent=gene2521;Dbxref=Genbank:NP_626756.1,GeneID:1097950;Name=NP_626756.1;Note=SCC121.19%2C possible hypothetical protein%2C len: 499 aa%3B similar to TR:O69831 (EMBL:AL023517) Streptomyces coelicolor   protease SC1B5.03C%2C 543 aa%3B fasta scores: opt: 772 z-score: 821.6 E(): 0%3B 32.2%25 identity in 537 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC121.19;product=hypothetical protein;protein_id=NP_626756.1;transl_table=11
NC_003888.3	RefSeq	gene	2712740	2713423	.	-	.	ID=gene2522;Dbxref=GeneID:1097951;Name=SCC121.20c;gbkey=Gene;gene=SCC121.20c;gene_biotype=protein_coding;gene_synonym=SCC121.20c;locus_tag=SCO2517
NC_003888.3	RefSeq	CDS	2712740	2713423	.	-	0	ID=cds2480;Parent=gene2522;Dbxref=Genbank:NP_626757.1,GeneID:1097951;Name=NP_626757.1;Note=SCC121.20c%2C possible two-component system response regulator%2C len: 227 aa%3B similar to various S. coelicolor two-component response regulators%2C e.g. TR:CAB51249 (EMBL:AL096872) Streptomyces coelicolor two-component response regulator SC5F7.36c%2C 227 aa%3B fasta scores: opt: 752 z-score: 883.6 E(): 0%3B 57.7%25 identity in 220 aa overlap. Contains two Pfam matches to entries PF00072 response_reg and PF00196 GerE. Contains also a possible helix-turn-helix motif at residues 168..189 (+3.69 SD);gbkey=CDS;gene=SCC121.20c;product=two-component system response regulator;protein_id=NP_626757.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2712779	2712976	.	-	.	ID=id3119;Dbxref=GeneID:1097951;Note=Pfam match to entry PF00196 GerE%2C %2C score 88.80%2C E-value 1.1e-22;gbkey=misc_feature;gene=SCC121.20c
NC_003888.3	RefSeq	sequence_feature	2713082	2713423	.	-	.	ID=id3120;Dbxref=GeneID:1097951;Note=Pfam match to entry PF00072 response_reg%2C %2C score 119.00%2C E-value 8.6e-32;gbkey=misc_feature;gene=SCC121.20c
NC_003888.3	RefSeq	gene	2713432	2714775	.	-	.	ID=gene2523;Dbxref=GeneID:1097952;Name=SCC121.21c;gbkey=Gene;gene=SCC121.21c;gene_biotype=protein_coding;gene_synonym=SCC121.21c;locus_tag=SCO2518
NC_003888.3	RefSeq	CDS	2713432	2714775	.	-	0	ID=cds2481;Parent=gene2523;Dbxref=Genbank:NP_626758.1,GeneID:1097952;Name=NP_626758.1;Note=SCC121.21c%2C possible two-component sensor kinase%2C len: 447 aa%3B similar to various S. coelicolor two-component sensor kinases%2C e.g. TR:CAB51250 (EMBL:AL096872) Streptomyces coelicolor two-component sensor kinase SC5F7.35c%2C 416 aa%3B fasta scores: opt: 752 z-score: 802.9 E(): 0%3B 40.7%25 identity in 410 aa overlap;gbkey=CDS;gene=SCC121.21c;product=two-component sensor kinase;protein_id=NP_626758.1;transl_table=11
NC_003888.3	RefSeq	gene	2714777	2716855	.	-	.	ID=gene2524;Dbxref=GeneID:1097953;Name=SCC121.22c;gbkey=Gene;gene=SCC121.22c;gene_biotype=protein_coding;gene_synonym=SCC121.22c;locus_tag=SCO2519
NC_003888.3	RefSeq	CDS	2714777	2716855	.	-	0	ID=cds2482;Parent=gene2524;Dbxref=Genbank:NP_626759.1,GeneID:1097953;Name=NP_626759.1;Note=SCC121.22c%2C probable membrane protein%2C len: 692 aa%3B similar to SW:MMLA_STRCO (EMBL:M64683) Streptomyces coelicolor  membrane protein ActII-3%2C 711 aa%3B fasta scores: opt: 1700 z-score: 1790.7 E(): 0%3B 42.7%25 identity in 693 aa overlap and to S. coelicolor SCF43.29c%2C 705 aa%3B fasta scores: opt: 848 z-score: 750.5 E(): 0%3B 40.1%25 identity in 700 aa overlap;gbkey=CDS;gene=SCC121.22c;product=hypothetical protein;protein_id=NP_626759.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2716864	2716868	.	-	.	ID=id3121;gbkey=RBS
NC_003888.3	RefSeq	gene	2717003	2718136	.	-	.	ID=gene2525;Dbxref=GeneID:1097954;Name=SCC121.23c;gbkey=Gene;gene=SCC121.23c;gene_biotype=protein_coding;gene_synonym=SCC121.23c;locus_tag=SCO2520
NC_003888.3	RefSeq	CDS	2717003	2718136	.	-	0	ID=cds2483;Parent=gene2525;Dbxref=Genbank:NP_626760.1,GeneID:1097954;Name=NP_626760.1;Note=SCC121.23c%2C possible membrane protein%2C len: 377 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC121.23c;product=hypothetical protein;protein_id=NP_626760.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2718144	2718148	.	-	.	ID=id3122;gbkey=RBS
NC_003888.3	RefSeq	gene	2718235	2719215	.	-	.	ID=gene2526;Dbxref=GeneID:1097955;Name=SCC121.24c;gbkey=Gene;gene=SCC121.24c;gene_biotype=protein_coding;gene_synonym=SCC121.24c;locus_tag=SCO2521
NC_003888.3	RefSeq	CDS	2718235	2719215	.	-	0	ID=cds2484;Parent=gene2526;Dbxref=Genbank:NP_626761.1,GeneID:1097955;Name=NP_626761.1;Note=SCC121.24c%2C unknown%2C len: 326 aa;gbkey=CDS;gene=SCC121.24c;product=hypothetical protein;protein_id=NP_626761.1;transl_table=11
NC_003888.3	RefSeq	gene	2719217	2720170	.	-	.	ID=gene2527;Dbxref=GeneID:1097956;Name=SCC121.25c;gbkey=Gene;gene=SCC121.25c;gene_biotype=protein_coding;gene_synonym=SCC121.25c;locus_tag=SCO2522
NC_003888.3	RefSeq	CDS	2719217	2720170	.	-	0	ID=cds2485;Parent=gene2527;Dbxref=Genbank:NP_626762.1,GeneID:1097956;Name=NP_626762.1;Note=SCC121.25c%2C unknown%2C len: 317 aa;gbkey=CDS;gene=SCC121.25c;product=hypothetical protein;protein_id=NP_626762.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2720174	2720177	.	-	.	ID=id3123;gbkey=RBS
NC_003888.3	RefSeq	gene	2720179	2721096	.	-	.	ID=gene2528;Dbxref=GeneID:1097957;Name=SCC121.26c;gbkey=Gene;gene=SCC121.26c;gene_biotype=protein_coding;gene_synonym=SCC121.26c;locus_tag=SCO2523
NC_003888.3	RefSeq	CDS	2720179	2721096	.	-	0	ID=cds2486;Parent=gene2528;Dbxref=Genbank:NP_626763.1,GeneID:1097957;Name=NP_626763.1;Note=SCC121.26c%2C unknown%2C len: 305 aa;gbkey=CDS;gene=SCC121.26c;product=hypothetical protein;protein_id=NP_626763.1;transl_table=11
NC_003888.3	RefSeq	gene	2721099	2722943	.	-	.	ID=gene2529;Dbxref=GeneID:1097958;Name=SCC121.27c;gbkey=Gene;gene=SCC121.27c;gene_biotype=protein_coding;gene_synonym=SCC121.27c;locus_tag=SCO2524
NC_003888.3	RefSeq	CDS	2721099	2722943	.	-	0	ID=cds2487;Parent=gene2529;Dbxref=Genbank:NP_626764.1,GeneID:1097958;Name=NP_626764.1;Note=SCC121.27c%2C unknown%2C len: 614 aa;gbkey=CDS;gene=SCC121.27c;product=hypothetical protein;protein_id=NP_626764.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2721104	2721108	.	-	.	ID=id3124;Dbxref=GeneID:1097958;gbkey=RBS;gene=SCC121.27c
NC_003888.3	RefSeq	sequence_feature	2722278	2722280	.	-	.	ID=id3125;Dbxref=GeneID:1097958;Note=leucine TTA codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCC121.27c
NC_003888.3	RefSeq	gene	2723027	2723800	.	-	.	ID=gene2530;Dbxref=GeneID:1097959;Name=SCC121.28c;gbkey=Gene;gene=SCC121.28c;gene_biotype=protein_coding;gene_synonym=SCC121.28c;locus_tag=SCO2525
NC_003888.3	RefSeq	CDS	2723027	2723800	.	-	0	ID=cds2488;Parent=gene2530;Dbxref=Genbank:NP_626765.1,GeneID:1097959;Name=NP_626765.1;Note=SCC121.28c%2C unknown%2C len: 257 aa;gbkey=CDS;gene=SCC121.28c;product=hypothetical protein;protein_id=NP_626765.1;transl_table=11
NC_003888.3	RefSeq	gene	2724049	2724603	.	+	.	ID=gene2531;Dbxref=GeneID:1097960;Name=SCC121.29;gbkey=Gene;gene=SCC121.29;gene_biotype=protein_coding;gene_synonym=SCC121.29;locus_tag=SCO2526
NC_003888.3	RefSeq	CDS	2724049	2724603	.	+	0	ID=cds2489;Parent=gene2531;Dbxref=Genbank:NP_626766.1,GeneID:1097960;Name=NP_626766.1;Note=SCC121.29c%2C possible acetyltransferase%2C len: 184 aa%3B similar to TR:O27080 (EMBLAE000872:) Methanobacterium thermoautotrophicum N-terminal acetyltransferase complex%2C subunit Ard1 MTH999%2C 156 aa%3B fasta scores: opt: 232 z-score: 289.3 E(): 1e-08%3B 29.6%25 identity in 152 aa overlap and to TR:CAB50578 (EMBL:AJ248288) Pyrococcus abyssi N-terminal acetyltransferase%2C 172 aa%3B fasta scores: opt: 213 z-score: 266.0 E(): 2e-07%3B 30.3%25 identity in 142 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf;gbkey=CDS;gene=SCC121.29;product=acetyltransferase;protein_id=NP_626766.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2724133	2724501	.	+	.	ID=id3126;Dbxref=GeneID:1097960;Note=Pfam match to entry PF00583 Acetyltransf%2C %2C score 59.00%2C E-value 1e-13;gbkey=misc_feature;gene=SCC121.29
NC_003888.3	RefSeq	gene	2724600	2725295	.	-	.	ID=gene2532;Dbxref=GeneID:1097961;Name=SCC121.30c;gbkey=Gene;gene=SCC121.30c;gene_biotype=protein_coding;gene_synonym=SCC121.30c;locus_tag=SCO2527
NC_003888.3	RefSeq	CDS	2724600	2725295	.	-	0	ID=cds2490;Parent=gene2532;Dbxref=Genbank:NP_626767.1,GeneID:1097961;Name=NP_626767.1;Note=SCC121.30c%2C unknown%2C len: 231 aa;gbkey=CDS;gene=SCC121.30c;product=hypothetical protein;protein_id=NP_626767.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2725302	2725306	.	-	.	ID=id3127;gbkey=RBS
NC_003888.3	RefSeq	gene	2725480	2727201	.	-	.	ID=gene2533;Dbxref=GeneID:1097962;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;gene_synonym=leuA,SCC121.31c;locus_tag=SCO2528
NC_003888.3	RefSeq	CDS	2725480	2727201	.	-	0	ID=cds2491;Parent=gene2533;Dbxref=Genbank:NP_733575.1,GeneID:1097962;Name=NP_733575.1;Note=SCC121.31c%2C leuA%2C 2-ispoprylmalate synthase (EC 4.1.3.12)%2C len: 499 aa%3B identical to C-terminal region of previously sequenced Streptomyces coelicolor 2-isopropylmalate synthase (EC 4.1.3.12) LeuA%2C 573 aa and highly similar to SW:LEU1_CORGL (EMBL:X70959) Corynebacterium glutamicum (Brevibacterium flavum) 2-isopropylmalate synthase (EC 4.1.3.12) (alpha-isopropylmalate synthase) (alpha-ipm synthetase) LeuA%2C 616 aa%3B fasta scores: opt: 1812 z-score: 2105.1 E(): 0%3B 55.1%25 identity in 506 aa overlap. Contains Pfam match to entry PF00682 HMGL-like and match to Prosite entry PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2~SCC117.01c%2C leuA%2C 2-isopropylmalate synthase (EC 4.1.3.12) (fragment)%2C len: > 113 aa. Previously sequenced and characterised Streptomyces coelicolor TR:O31046(EMBL:AF026444) (573 aa). Contains a Prosite hit to PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. Overlaps and extends into CDS SCC121.31c on the adjoining cosmid.;gbkey=CDS;gene=leuA;product=2-isopropylmalate synthase;protein_id=NP_733575.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2726194	2726979	.	-	.	ID=id3128;Dbxref=GeneID:1097962;Note=Pfam match to entry PF00682 HMGL-like%2C %2C score 204.40%2C E-value 1.8e-57;gbkey=misc_feature;gene=leuA
NC_003888.3	RefSeq	sequence_feature	2726413	2726454	.	-	.	ID=id3129;Dbxref=GeneID:1097962;Note=PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2;gbkey=misc_feature;gene=leuA
NC_003888.3	RefSeq	sequence_feature	2726862	2727524	.	-	.	ID=id3130;Note=99 %25 identical to Streptomyces coelicolor TR:O31046(EMBL:AF026444) leuA leader peptide and 2-isopropylmalate synthase (leuA) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	2727022	2727072	.	-	.	ID=id3131;Dbxref=GeneID:1097962;Note=PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1;gbkey=misc_feature;gene=leuA
NC_003888.3	RefSeq	ribosome_entry_site	2727213	2727217	.	-	.	ID=id3132;gbkey=RBS
NC_003888.3	RefSeq	gene	2727564	2728634	.	+	.	ID=gene2534;Dbxref=GeneID:1097963;Name=SCC117.02;gbkey=Gene;gene=SCC117.02;gene_biotype=protein_coding;gene_synonym=SCC117.02;locus_tag=SCO2529
NC_003888.3	RefSeq	CDS	2727564	2728634	.	+	0	ID=cds2492;Parent=gene2534;Dbxref=Genbank:NP_626768.1,GeneID:1097963;Name=NP_626768.1;Note=SCC117.02%2C possible metalloprotease%2C len: 356 aa. Highly similar to several including: Serratia marcescens SW:SMP_SERMA(EMBL:M59854) extracellular minor metalloprotease precursor (EC 3.4.24.-) (352 aa)%2C fasta scores opt: 659 z-score: 721.0 E(): 9e-33 41.2%25 identity in 291 aa overlap and Erwinia carotovora subsp. carotovora SW:PRT1_ERWCA(EMBL:M36651) extracellular metalloprotease precursor (EC 3.4.24.-) (347 aa)%2C fasta scores opt: 1151 z-score: 1254.0 E():0 49.6%25 identity in 349 aa overlap. Contains a Pfam match to entry PF01447 Peptidase_M4%2C Thermolysin family peptidase and a Prosite hit to S00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;gbkey=CDS;gene=SCC117.02;product=metalloprotease;protein_id=NP_626768.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2727696	2728619	.	+	.	ID=id3133;Dbxref=GeneID:1097963;Note=Pfam match to entry PF01447 Peptidase_M4%2C Thermolysin family peptidase%2C score 252.10%2C E-value 7.7e-72;gbkey=misc_feature;gene=SCC117.02
NC_003888.3	RefSeq	sequence_feature	2728074	2728103	.	+	.	ID=id3134;Dbxref=GeneID:1097963;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;gbkey=misc_feature;gene=SCC117.02
NC_003888.3	RefSeq	gene	2728656	2728922	.	+	.	ID=gene2535;Dbxref=GeneID:1097964;Name=SCC117.03;gbkey=Gene;gene=SCC117.03;gene_biotype=protein_coding;gene_synonym=SCC117.03;locus_tag=SCO2530
NC_003888.3	RefSeq	CDS	2728656	2728922	.	+	0	ID=cds2493;Parent=gene2535;Dbxref=Genbank:NP_626769.1,GeneID:1097964;Name=NP_626769.1;Note=SCC117.03%2C unknown%2C len: 88 aa.;gbkey=CDS;gene=SCC117.03;product=hypothetical protein;protein_id=NP_626769.1;transl_table=11
NC_003888.3	RefSeq	gene	2728980	2730326	.	+	.	ID=gene2536;Dbxref=GeneID:1097965;Name=SCC117.04;gbkey=Gene;gene=SCC117.04;gene_biotype=protein_coding;gene_synonym=SCC117.04;locus_tag=SCO2531
NC_003888.3	RefSeq	CDS	2728980	2730326	.	+	0	ID=cds2494;Parent=gene2536;Dbxref=Genbank:NP_626770.1,GeneID:1097965;Name=NP_626770.1;Note=SCC117.04%2C possible beta-glucosidase%2C len: 448 aa. Highly similar to many including: Microbispora bispora SW:BGLB_MICBI(EMBL:M97265) thermostable beta-glucosidase B (EC 3.2.1.21) (473 aa)%2C fasta scores opt: 1059 z-score: 1221.1 E(): 0 48.7%25 identity in 454 aa overlap and Paenibacillus polymyxa (Bacillus polymyxa) SW:BGLA_PAEPO(EMBL:M60210) beta-glucosidase A (EC 3.2.1.21) (448 aa)%2C fasta scores opt: 1014 z-score: 1169.7 E():0 40.4%25 identity in 455 aa overlap. Contains a Prosite hit to PS00653 Glycosyl hydrolases family 1 N-terminal signature and a Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1.;gbkey=CDS;gene=SCC117.04;product=beta-glucosidase;protein_id=NP_626770.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2729010	2730323	.	+	.	ID=id3135;Dbxref=GeneID:1097965;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 518.30%2C E-value 5.8e-152;gbkey=misc_feature;gene=SCC117.04
NC_003888.3	RefSeq	sequence_feature	2729034	2729078	.	+	.	ID=id3136;Dbxref=GeneID:1097965;Note=PS00653 Glycosyl hydrolases family 1 N-terminal signature;gbkey=misc_feature;gene=SCC117.04
NC_003888.3	RefSeq	gene	2730432	2731511	.	+	.	ID=gene2537;Dbxref=GeneID:1097966;Name=SCC117.05;gbkey=Gene;gene=SCC117.05;gene_biotype=protein_coding;gene_synonym=SCC117.05;locus_tag=SCO2532
NC_003888.3	RefSeq	CDS	2730432	2731511	.	+	0	ID=cds2495;Parent=gene2537;Dbxref=Genbank:NP_626771.1,GeneID:1097966;Name=NP_626771.1;Note=SCC117.05%2C PhoH-like protein%2C len: 359 aa. Highly similar to many including: Escherichia coli SW:PHOH_ECOLI (EMBL:D10391) phosphate starvation-inducible protein PhoH protein (354 aa)%2C fasta scores opt: 583 z-score: 650.4 E(): 7.8e-29 37.7%25 identity in 321 aa overlap and Mycobacterium tuberculosis SW:PHOL_MYCTU(EMBL:Z95208) PhoH-like protein (352 aa)%2C fasta scores opt: 1407 z-score: 1560.0 E():0 63.6%25 identity in 349 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCC117.05;product=PhoH-like protein;protein_id=NP_626771.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2730885	2730908	.	+	.	ID=id3137;Dbxref=GeneID:1097966;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC117.05
NC_003888.3	RefSeq	gene	2731524	2732021	.	+	.	ID=gene2538;Dbxref=GeneID:1097967;Name=SCC117.06;gbkey=Gene;gene=SCC117.06;gene_biotype=protein_coding;gene_synonym=SCC117.06;locus_tag=SCO2533
NC_003888.3	RefSeq	CDS	2731524	2732021	.	+	0	ID=cds2496;Parent=gene2538;Dbxref=Genbank:NP_626772.1,GeneID:1097967;Name=NP_626772.1;Note=SCC117.06%2C unknown%2C len: 165 aa. Highly similar to several proteins of unknown function%2C including: Mycobacterium tuberculosis SW:Y1DD_MYCTU(EMBL:Z95208) hypothetical 20.3 KD protein (182 aa)%2C fasta scores opt: 599 z-score: 713.5 E(): 2.4e-32 56.5%25 identity in 154 aa overlap and Mycobacterium leprae SW:YN67_MYCLE(EMBL:U00016) hypothetical 19.8 KD protein (178 aa)%2C fasta scores opt: 588 z-score: 700.8 E(): 1.2e-31 54.5%25 identity in 154 aa overlap. Contains a Prosite hit to PS01306 Uncharacterised protein family UPF0054 signature;gbkey=CDS;gene=SCC117.06;product=metalloprotease;protein_id=NP_626772.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2731878	2731910	.	+	.	ID=id3138;Dbxref=GeneID:1097967;Note=PS01306 Uncharacterised protein family UPF0054 signature;gbkey=misc_feature;gene=SCC117.06
NC_003888.3	RefSeq	gene	2732018	2733322	.	+	.	ID=gene2539;Dbxref=GeneID:1097968;Name=SCC117.07;gbkey=Gene;gene=SCC117.07;gene_biotype=protein_coding;gene_synonym=SCC117.07,SCC77.01;locus_tag=SCO2534
NC_003888.3	RefSeq	CDS	2732018	2733322	.	+	0	ID=cds2497;Parent=gene2539;Dbxref=Genbank:NP_733576.1,GeneID:1097968;Name=NP_733576.1;Note=SCC77.01%2C unknown%2C partial CDS%2C len: > 110 aa. Highly similar to a protein of undefined function from Mycobacterium tuberculosis SW:Y1DE_MYCTU(EMBL:Z95208) (435 aa)%2C fasta scores opt: 290 z-score: 369.6 E(): 3.4e-13 54.0%25 identity in 100 aa overlap. Overlaps and extends into CDS SCC117.07 on the adjoining cosmid.~SCC117.07%2C possible membrane protein%2C partial CDS%2C len: > 358 aa. Highly similar to several proteins of undefined function e.g. Mycobacterium tuberculosis SW:YN66_MYCTU(EMBL:Z95208) hypothetical 47.2 KD protein (435 aa)%2C fasta scores opt: 1159 z-score: 1367.6 E(): 0 53.0%25 identity in 353 aa overlap and Thermotoga maritima TR:Q9WZU9(EMBL:AE001751) hemolysin-related protein (455 aa)%2C fasta scores opt: 568 z-score: 671.7 E(): 5.1e-30 29.9%25 identity in 355 aa overlap. Contains a Pfam match to entry PF01595 DUF21%2C Domain of unknown function and 2xPfam matches to entry PF00571 CBS%2C CBS domain. Contains a possible N-terminal signal sequence and membrane spanning hydrophobic domains. Overlaps and extends into CDS SCC77.01 on the adjoining cosmid.;gbkey=CDS;gene=SCC117.07;product=hypothetical protein;protein_id=NP_733576.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2732024	2732593	.	+	.	ID=id3139;Dbxref=GeneID:1097968;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function%2C score 81.50%2C E-value 1.8e-20;gbkey=misc_feature;gene=SCC117.07
NC_003888.3	RefSeq	sequence_feature	2732627	2732791	.	+	.	ID=id3140;Dbxref=GeneID:1097968;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 27.00%2C E-value 0.00043;gbkey=misc_feature;gene=SCC117.07
NC_003888.3	RefSeq	sequence_feature	2732822	2732983	.	+	.	ID=id3141;Dbxref=GeneID:1097968;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 29.60%2C E-value 7.3e-05;gbkey=misc_feature;gene=SCC117.07
NC_003888.3	RefSeq	ribosome_entry_site	2733303	2733308	.	+	.	ID=id3142;Dbxref=GeneID:1097968;gbkey=RBS;gene=SCC117.07
NC_003888.3	RefSeq	gene	2733319	2733693	.	+	.	ID=gene2540;Dbxref=GeneID:1097969;Name=SCC77.02;gbkey=Gene;gene=SCC77.02;gene_biotype=protein_coding;gene_synonym=SCC77.02;locus_tag=SCO2535
NC_003888.3	RefSeq	CDS	2733319	2733693	.	+	0	ID=cds2498;Parent=gene2540;Dbxref=Genbank:NP_626773.1,GeneID:1097969;Name=NP_626773.1;Note=SCC77.02%2C unknown%2C len: 124 aa. Similar to several proteins of unknown function including: Streptomyces lavendulae TR:Q9X5T5(EMBL:AF127374) MmcQ%2C located within the antibiotic mitomycin C biosynthetic gene cluster (123 aa)%2C fasta scores opt: 377 z-score: 487.1 E(): 9.6e-20 52.0%25 identity in 127 aa overlap and Deinococcus radiodurans TR:AAF11947(EMBL:AE002071) conserved hypothetical protein (132 aa)%2C fasta scores opt: 299 z-score: 389.0 E(): 2.8e-14 43.0%25 identity in 128 aa overlap.;gbkey=CDS;gene=SCC77.02;product=hypothetical protein;protein_id=NP_626773.1;transl_table=11
NC_003888.3	RefSeq	gene	2733655	2735154	.	-	.	ID=gene2541;Dbxref=GeneID:1097970;Name=SCC77.03c;gbkey=Gene;gene=SCC77.03c;gene_biotype=protein_coding;gene_synonym=SCC77.03c;locus_tag=SCO2536
NC_003888.3	RefSeq	CDS	2733655	2735154	.	-	0	ID=cds2499;Parent=gene2541;Dbxref=Genbank:NP_626774.1,GeneID:1097970;Name=NP_626774.1;Note=SCC77.03c%2C probable transmembrane transport protein%2C len: 499 aa. Highly similar to many including: Nocardia lactamdurans SW:CMCT_NOCLA(EMBL:Z13973) cephamycin export protein CmcT (486 aa)%2C fasta scores opt: 721 z-score: 808.4 E():0 38.5%25 identity in 478 aa overlap and Streptomyces coelicolor TR:O54179(EMBL:AL021411) export protein SC7H1.20C (483 aa)%2C fasta scores opt: 745 z-score: 835.2 E():0 47.1%25 identity in 495 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC77.03c;product=transmembrane transport protein;protein_id=NP_626774.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2733673	2735064	.	-	.	ID=id3143;Dbxref=GeneID:1097970;Note=Pfam match to entry PF00083 sugar_tr%2C %2C score -94.00%2C E-value 0.0016;gbkey=misc_feature;gene=SCC77.03c
NC_003888.3	RefSeq	gene	2735261	2736145	.	+	.	ID=gene2542;Dbxref=GeneID:1097971;Name=SCC77.04c;gbkey=Gene;gene=SCC77.04c;gene_biotype=protein_coding;gene_synonym=SCC77.04c;locus_tag=SCO2537
NC_003888.3	RefSeq	CDS	2735261	2736145	.	+	0	ID=cds2500;Parent=gene2542;Dbxref=Genbank:NP_626775.1,GeneID:1097971;Name=NP_626775.1;Note=SCC77.04c%2C possible DNA-binding protein%2C len: 294 aa. Highly similar to several other Streptomyces coelicolor proteins including: TR:CAB52924 (EMBL:AL109949) DNA-binding protein SCJ11.39C (279 aa)%2C fasta scores opt: 575 z-score: 702.8 E(): 9.3e-32 41.2%25 identity in 257 aa overlap and TR:CAB55664 (EMBL:AL117385) hypothetical 32.2 KD protein SC5G9.16 (295 aa)%2C fasta scores opt: 521 z-score: 637.0 E(): 4.3e-28 36.5%25 identity in 288 aa overlap. Contains a helix-turn-helix motif situated between residues 47..68 (+2.88 SD).;gbkey=CDS;gene=SCC77.04c;product=DNA-binding protein;protein_id=NP_626775.1;transl_table=11
NC_003888.3	RefSeq	gene	2736142	2736540	.	+	.	ID=gene2543;Dbxref=GeneID:1097972;Name=SCC77.05;gbkey=Gene;gene=SCC77.05;gene_biotype=protein_coding;gene_synonym=SCC77.05;locus_tag=SCO2538
NC_003888.3	RefSeq	CDS	2736142	2736540	.	+	0	ID=cds2501;Parent=gene2543;Dbxref=Genbank:NP_626776.1,GeneID:1097972;Name=NP_626776.1;Note=SCC77.05%2C unknown%2C len: 132 aa. Similar to Mycobacterium tuberculosis TR:O05833(EMBL:Z95208) hypothetical 11.1 KD protein (113 aa)%2C fasta scores opt: 254 z-score: 298.3 E(): 3.2e-09 53.1%25 identity in 96 aa overlap and Mycobacterium leprae TR:Q49767(EMBL:U00016) hypothetical 11.1 KD protein (108 aa)%2C fasta scores opt: 186 z-score: 224.0 E(): 4.4e-05 39.4%25 identity in 99 aa overlap.;gbkey=CDS;gene=SCC77.05;product=hypothetical protein;protein_id=NP_626776.1;transl_table=11
NC_003888.3	RefSeq	gene	2736597	2737559	.	+	.	ID=gene2544;Dbxref=GeneID:1097973;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;gene_synonym=bex,rbaA,sdgE,yqfH;locus_tag=SCO2539
NC_003888.3	RefSeq	CDS	2736597	2737559	.	+	0	ID=cds2502;Parent=gene2544;Dbxref=Genbank:NP_626777.1,GeneID:1097973;Name=NP_626777.1;Note=Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome;gbkey=CDS;gene=era;product=GTP-binding protein Era;protein_id=NP_626777.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2736678	2736701	.	+	.	ID=id3144;Dbxref=GeneID:1097973;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=era
NC_003888.3	RefSeq	gene	2737582	2738772	.	-	.	ID=gene2545;Dbxref=GeneID:1097974;Name=SCC77.07c;gbkey=Gene;gene=SCC77.07c;gene_biotype=protein_coding;gene_synonym=SCC77.07c;locus_tag=SCO2540
NC_003888.3	RefSeq	CDS	2737582	2738772	.	-	0	ID=cds2503;Parent=gene2545;Dbxref=Genbank:NP_626778.1,GeneID:1097974;Name=NP_626778.1;Note=SCC77.07c%2C possible carbohydrate kinase%2C len: 396 aa. Weakly similar to many kinases including: Escherichia coli SW:RBSK_ECOLI(EMBL:M13169) ribokinase (EC 2.7.1.15) (309 aa)%2C fasta scores opt: 283 z-score: 306.1 E(): 1.2e-09 29.3%25 identity in 297 aa overlap. Contains a Prosite hit to PS00584 pfkB family of carbohydrate kinases signature 2 and a Pfam match to entry PF00294 pfkB. Rich in the amino acid Ala.;gbkey=CDS;gene=SCC77.07c;product=carbohydrate kinase;protein_id=NP_626778.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2737858	2737899	.	-	.	ID=id3145;Dbxref=GeneID:1097974;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;gbkey=misc_feature;gene=SCC77.07c
NC_003888.3	RefSeq	sequence_feature	2737864	2738193	.	-	.	ID=id3146;Dbxref=GeneID:1097974;Note=Pfam match to entry PF00294 pfkB%2C %2C score 38.50%2C E-value 3.6e-11;gbkey=misc_feature;gene=SCC77.07c
NC_003888.3	RefSeq	gene	2738852	2740222	.	-	.	ID=gene2546;Dbxref=GeneID:1097975;Name=SCC77.08c;gbkey=Gene;gene=SCC77.08c;gene_biotype=protein_coding;gene_synonym=SCC77.08c;locus_tag=SCO2541
NC_003888.3	RefSeq	CDS	2738852	2740222	.	-	0	ID=cds2504;Parent=gene2546;Dbxref=Genbank:NP_626779.1,GeneID:1097975;Name=NP_626779.1;Note=SCC77.08c%2C probable transmembrane transport protein%2C len: 456 aa. Highly similar to many including: Pseudomonas putida SW:PHT1_PSEPU(EMBL:D13229) phthalate transporter (451 aa)%2C fasta scores opt: 817 z-score: 912.4 E():0 34.6%25 identity in 416 aa overlap%2C Streptomyces coelicolor TR:CAB61275(EMBL:AL132991) transporter SCF55.05C (455 aa)%2C fasta scores opt: 699 z-score: 781.2 E():0 36.0%25 identity in 453 aa overlap and Agrobacterium vitis SW:TUB4_AGRVI(EMBL:U25634) tartrate transporter (433 aa)%2C fasta scores opt: 1154 z-score: 1287.3 E():0 43.6%25 identity in 433 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC77.08c;product=transmembrane transport protein;protein_id=NP_626779.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2738942	2740222	.	-	.	ID=id3147;Dbxref=GeneID:1097975;Note=Pfam match to entry PF00083 sugar_tr%2C %2C score -41.50%2C E-value 2.3e-05;gbkey=misc_feature;gene=SCC77.08c
NC_003888.3	RefSeq	gene	2740287	2741582	.	-	.	ID=gene2547;Dbxref=GeneID:1097976;Name=SCC77.09c;gbkey=Gene;gene=SCC77.09c;gene_biotype=protein_coding;gene_synonym=SCC77.09c;locus_tag=SCO2542
NC_003888.3	RefSeq	CDS	2740287	2741582	.	-	0	ID=cds2505;Parent=gene2547;Dbxref=Genbank:NP_626780.1,GeneID:1097976;Name=NP_626780.1;Note=SCC77.09c%2C possible glucarate dehydratase%2C len: 431 aa. Similar to many glucarate dehydratases and (less similar) to many members of the mandelate racemase / muconate lactonizing enzyme family: Escherichia coli SW:GUD1_ECOLI(EMBL:AE000362) probable glucarate dehydratase 1 (EC 4.2.1.40) (446 aa)%2C fasta scores opt: 673 z-score: 769.9 E(): 0 37.3%25 identity in 440 aa overlap and Rhodococcus opacus TR:O67985(EMBL:AF003948) chloromuconate cycloisomerase (373 aa)%2C fasta scores opt: 271 z-score: 312.8 E(): 4.9e-10 26.2%25 identity in 416 aa overlap. Contains a Pfam match to entry PF01188 MR_MLE.;gbkey=CDS;gene=SCC77.09c;product=glucarate dehydratase;protein_id=NP_626780.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2740449	2741567	.	-	.	ID=id3148;Dbxref=GeneID:1097976;Note=Pfam match to entry PF01188 MR_MLE%2C %2C score 42.90%2C E-value 8.7e-11;gbkey=misc_feature;gene=SCC77.09c
NC_003888.3	RefSeq	gene	2741579	2742547	.	-	.	ID=gene2548;Dbxref=GeneID:1097977;Name=SCC77.10c;gbkey=Gene;gene=SCC77.10c;gene_biotype=protein_coding;gene_synonym=SCC77.10c;locus_tag=SCO2543
NC_003888.3	RefSeq	CDS	2741579	2742547	.	-	0	ID=cds2506;Parent=gene2548;Dbxref=Genbank:NP_626781.1,GeneID:1097977;Name=NP_626781.1;Note=catalyzes the formation of 2%2C5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate;gbkey=CDS;gene=SCC77.10c;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=NP_626781.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2741590	2741594	.	-	.	ID=id3149;Dbxref=GeneID:1097977;gbkey=RBS;gene=SCC77.10c
NC_003888.3	RefSeq	sequence_feature	2741651	2742412	.	-	.	ID=id3150;Dbxref=GeneID:1097977;Note=Pfam match to entry PF00701 DHDPS%2C %2C score 188.30%2C E-value 1.2e-52;gbkey=misc_feature;gene=SCC77.10c
NC_003888.3	RefSeq	gene	2742662	2743459	.	+	.	ID=gene2549;Dbxref=GeneID:1097978;Name=SCC77.11;gbkey=Gene;gene=SCC77.11;gene_biotype=protein_coding;gene_synonym=SCC77.11;locus_tag=SCO2544
NC_003888.3	RefSeq	CDS	2742662	2743459	.	+	0	ID=cds2507;Parent=gene2549;Dbxref=Genbank:NP_626782.1,GeneID:1097978;Name=NP_626782.1;Note=SCC77.11%2C possible IclR-family transcriptional regulator%2C len: 265 aa. Similar to many other IclR-family regulators including: Escherichia coli SW:ICLR_ECOLI (EMBL:M31761) acetate operon repressor IclR (274 aa)%2C fasta scores opt: 368 z-score: 447.5 E(): 1.5e-17 33.1%25 identity in 263 aa overlap and Erwinia carotovora subsp. carotovora TR:AAD50647 (EMBL:AF135396) regulator of virulence KdgR (263 aa)%2C fasta scores opt: 326 z-score: 397.5 E(): 9.4e-15 29.7%25 identity in 239 aa overlap. Contains a possible N-terminal helix-turn-helix motif%2C situated between residues 36..57 (+4.94 SD) and a Pfam match to entry PF01614 IclR.;gbkey=CDS;gene=SCC77.11;product=IclR family transcriptional regulator;protein_id=NP_626782.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2742881	2743423	.	+	.	ID=id3151;Dbxref=GeneID:1097978;Note=Pfam match to entry PF01614 IclR%2C %2C score 123.90%2C E-value 2.9e-33;gbkey=misc_feature;gene=SCC77.11
NC_003888.3	RefSeq	gene	2743633	2744982	.	+	.	ID=gene2550;Dbxref=GeneID:1097979;Name=SCC77.12;gbkey=Gene;gene=SCC77.12;gene_biotype=protein_coding;gene_synonym=SCC77.12;locus_tag=SCO2545
NC_003888.3	RefSeq	CDS	2743633	2744982	.	+	0	ID=cds2508;Parent=gene2550;Dbxref=Genbank:NP_626783.1,GeneID:1097979;Name=NP_626783.1;Note=SCC77.12%2C possible transmembrane efflux protein%2C len: 449 aa. Weakly similar to Streptomyces lividans SW:CMLR_STRLI(EMBL:X59968) chloramphenicol resistance protein CmlR (392 aa)%2C fasta scores opt: 234 z-score: 234.3 E(): 1.2e-05 27.5%25 identity in 396 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC77.12;product=transmembrane efflux protein;protein_id=NP_626783.1;transl_table=11
NC_003888.3	RefSeq	gene	2745002	2746024	.	-	.	ID=gene2551;Dbxref=GeneID:1097980;Name=SCC77.13c;gbkey=Gene;gene=SCC77.13c;gene_biotype=protein_coding;gene_synonym=SCC77.13c;locus_tag=SCO2546
NC_003888.3	RefSeq	CDS	2745002	2746024	.	-	0	ID=cds2509;Parent=gene2551;Dbxref=Genbank:NP_626784.1,GeneID:1097980;Name=NP_626784.1;Note=catalyzes the formation of inosine from adenosine;gbkey=CDS;gene=SCC77.13c;product=adenosine deaminase;protein_id=NP_626784.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2745038	2745850	.	-	.	ID=id3152;Dbxref=GeneID:1097980;Note=Pfam match to entry PF00962 A_deaminase%2C %2C score 209.10%2C E-value 6.6e-59;gbkey=misc_feature;gene=SCC77.13c
NC_003888.3	RefSeq	gene	2746021	2746926	.	-	.	ID=gene2552;Dbxref=GeneID:1097981;Name=SCC77.14c;gbkey=Gene;gene=SCC77.14c;gene_biotype=protein_coding;gene_synonym=SCC77.14c;locus_tag=SCO2547
NC_003888.3	RefSeq	CDS	2746021	2746926	.	-	0	ID=cds2510;Parent=gene2552;Dbxref=Genbank:NP_626785.1,GeneID:1097981;Name=NP_626785.1;Note=member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions;gbkey=CDS;gene=SCC77.14c;product=ribonuclease Z;protein_id=NP_626785.1;transl_table=11
NC_003888.3	RefSeq	gene	2746955	2747308	.	-	.	ID=gene2553;Dbxref=GeneID:1097982;Name=SCC77.15c;gbkey=Gene;gene=SCC77.15c;gene_biotype=protein_coding;gene_synonym=SCC77.15c;locus_tag=SCO2548
NC_003888.3	RefSeq	CDS	2746955	2747308	.	-	0	ID=cds2511;Parent=gene2553;Dbxref=Genbank:NP_626786.1,GeneID:1097982;Name=NP_626786.1;Note=SCC77.15c%2C possible Hit-family protein%2C len: 117 aa. Similar to many proteins carrying the HIT (histidine triad) family motif which is thought to mediate nucleotide binding%2C including: Oryctolagus cuniculus (Rabbit) SW:IPK1_RABIT(EMBL:Y11175) HinT protein (protein kinase C inhibitor 1) (125 aa)%2C fasta scores opt: 338 z-score: 429.0 E(): 1.7e-16 47.4%25 identity in 114 aa overlap and Aquifex aeolicus SW:YHIT_AQUAE(EMBL:AE000675) hypothetical Hit-like protein AQ_141 (121 aa)%2C fasta scores opt: 369 z-score: 467.0 E(): 1.3e-18 46.2%25 identity in 119 aa overlap. Contains a Pfam match to entry PF01230 HIT.;gbkey=CDS;gene=SCC77.15c;product=Hit-family protein;protein_id=NP_626786.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2746982	2747284	.	-	.	ID=id3153;Dbxref=GeneID:1097982;Note=Pfam match to entry PF01230 HIT%2C %2C score 134.20%2C E-value 2.3e-36;gbkey=misc_feature;gene=SCC77.15c
NC_003888.3	RefSeq	ribosome_entry_site	2747315	2747319	.	-	.	ID=id3154;gbkey=RBS
NC_003888.3	RefSeq	repeat_region	2747440	2747496	.	+	.	ID=id3155;Note=88%25 identical to the region complement(14547..14601).;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	2747535	2747589	.	-	.	ID=id3156;Note=88%25 identical to the region 14452..14508.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2747664	2750867	.	-	.	ID=gene2554;Dbxref=GeneID:1097983;Name=SCC77.16c.;gbkey=Gene;gene=SCC77.16c.;gene_biotype=protein_coding;gene_synonym=SCC77.16c.;locus_tag=SCO2549
NC_003888.3	RefSeq	CDS	2747664	2750867	.	-	0	ID=cds2512;Parent=gene2554;Dbxref=Genbank:NP_626787.1,GeneID:1097983;Name=NP_626787.1;Note=SCC77.16c%2C possible protease%2C len: 1067 aa. Similar to Thermoplasma acidophilum TR:P96086(EMBL:U72850) tricorn protease (1071 aa)%2C fasta scores opt:opt: 937 z-score: 985.8 E():0 29.9%25 identity in 1091 aa overlap and Streptomyces coelicolor TR:CAB59664(EMBL:AL132674)  protease SCE87.19 (1171 aa)%2C fasta scores opt: 2252 z-score: 2374.0 E():0 48.1%25 identity in 1159 aa overlap.;gbkey=CDS;gene=SCC77.16c.;product=protease;protein_id=NP_626787.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2750509	2753076	.	-	.	ID=id3157;Note=Shares 100 %25 identity with S.coelicolor A3(2) EMBL:AF170561 pth270 promoter region containing sdrD gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2750935	2751450	.	-	.	ID=gene2555;Dbxref=GeneID:1097984;Name=SCC77.17c;gbkey=Gene;gene=SCC77.17c;gene_biotype=protein_coding;gene_synonym=SCC77.17c;locus_tag=SCO2550
NC_003888.3	RefSeq	CDS	2750935	2751450	.	-	0	ID=cds2513;Parent=gene2555;Dbxref=Genbank:NP_626788.1,GeneID:1097984;Name=NP_626788.1;Note=SCC77.17c%2C possible lipoprotein%2C len: 171 aa. Contains an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC77.17c;product=lipoprotein;protein_id=NP_626788.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2751370	2751402	.	-	.	ID=id3158;Dbxref=GeneID:1097984;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCC77.17c
NC_003888.3	RefSeq	gene	2751556	2751900	.	+	.	ID=gene2556;Dbxref=GeneID:1097985;Name=SCC77.18;gbkey=Gene;gene=SCC77.18;gene_biotype=protein_coding;gene_synonym=SCC77.18;locus_tag=SCO2551
NC_003888.3	RefSeq	CDS	2751556	2751900	.	+	0	ID=cds2514;Parent=gene2556;Dbxref=Genbank:NP_626789.1,GeneID:1097985;Name=NP_626789.1;Note=SCC77.18%2C unknown%2C len: 114 aa.;gbkey=CDS;gene=SCC77.18;product=hypothetical protein;protein_id=NP_626789.1;transl_table=11
NC_003888.3	RefSeq	gene	2751941	2752690	.	-	.	ID=gene2557;Dbxref=GeneID:1097986;Name=sdrD;gbkey=Gene;gene=sdrD;gene_biotype=protein_coding;gene_synonym=sdrD;locus_tag=SCO2552
NC_003888.3	RefSeq	CDS	2751941	2752690	.	-	0	ID=cds2515;Parent=gene2557;Dbxref=Genbank:NP_626790.1,GeneID:1097986;Name=NP_626790.1;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase;gbkey=CDS;gene=sdrD;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=NP_626790.1;transl_table=11
NC_003888.3	RefSeq	gene	2752687	2753781	.	-	.	ID=gene2558;Dbxref=GeneID:1097987;Name=SCC77.20c;gbkey=Gene;gene=SCC77.20c;gene_biotype=protein_coding;gene_synonym=SCC77.20c;locus_tag=SCO2553
NC_003888.3	RefSeq	CDS	2752687	2753781	.	-	0	ID=cds2516;Parent=gene2558;Dbxref=Genbank:NP_626791.1,GeneID:1097987;Name=NP_626791.1;Note=SCC77.20c%2C possible oxidoreductase%2C len: 364 aa. This CDS has been partially sequenced and the C-terminal 142 aa%2C of its predicted protein product%2C are identical to Streptomyces coelicolor TR:Q02797(EMBL:X68792) hypothetical protein in pth270 promoter (fragment). Also highly similar to Mycobacterium tuberculosis TR:O33323(EMBL:AL008967) oxidoreductase (344 aa)%2C fasta scores opt: 912 z-score: 971.6 E(): 0 45.5%25 identity in 336 aa overlap and Bacillus subtilis TR:O05413(EMBL:U93875) 2-nitropropane dioxygenase (347 aa)%2C fasta scores opt: 702 z-score:749.8 E(): 0 37.8%25 identity in 339 aa overlap.;gbkey=CDS;gene=SCC77.20c;product=oxidoreductase;protein_id=NP_626791.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2752687	2752693	.	-	.	ID=id3159;Dbxref=GeneID:1097987;Note=potential whiG dependent promoter -10 region.;gbkey=misc_feature;gene=SCC77.20c
NC_003888.3	RefSeq	sequence_feature	2752710	2752713	.	-	.	ID=id3160;Dbxref=GeneID:1097987;Note=potential whiG dependent promoter -35 region.;gbkey=misc_feature;gene=SCC77.20c
NC_003888.3	RefSeq	gene	2753870	2755006	.	-	.	ID=gene2559;Dbxref=GeneID:1097988;Name=dnaJ2;gbkey=Gene;gene=dnaJ2;gene_biotype=protein_coding;gene_synonym=dnaJ2;locus_tag=SCO2554
NC_003888.3	RefSeq	CDS	2753870	2755006	.	-	0	ID=cds2517;Parent=gene2559;Dbxref=Genbank:NP_626792.1,GeneID:1097988;Name=NP_626792.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;gene=dnaJ2;product=chaperone protein DnaJ;protein_id=NP_626792.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2753963	2754328	.	-	.	ID=id3161;Dbxref=GeneID:1097988;Note=Pfam match to entry PF01556 DnaJ_C%2C %2C score 219.00%2C E-value 7e-62;gbkey=misc_feature;gene=dnaJ2
NC_003888.3	RefSeq	sequence_feature	2754365	2754619	.	-	.	ID=id3162;Dbxref=GeneID:1097988;Note=Pfam match to entry PF00684 DnaJ_CXXCXGXG%2C %2C score 93.20%2C E-value 5.2e-24;gbkey=misc_feature;gene=dnaJ2
NC_003888.3	RefSeq	sequence_feature	2754803	2754997	.	-	.	ID=id3163;Dbxref=GeneID:1097988;Note=Pfam match to entry PF00226 DnaJ%2C %2C score 127.30%2C E-value 2.8e-34;gbkey=misc_feature;gene=dnaJ2
NC_003888.3	RefSeq	sequence_feature	2754815	2754874	.	-	.	ID=id3164;Dbxref=GeneID:1097988;Note=PS00636 Nt-dnaJ domain signature1;gbkey=misc_feature;gene=dnaJ2
NC_003888.3	RefSeq	gene	2755007	2756023	.	-	.	ID=gene2560;Dbxref=GeneID:1097989;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;gene_synonym=SCC77.22c;locus_tag=SCO2555
NC_003888.3	RefSeq	CDS	2755007	2756023	.	-	0	ID=cds2518;Parent=gene2560;Dbxref=Genbank:NP_626793.1,GeneID:1097989;Name=NP_626793.1;Note=Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons;gbkey=CDS;gene=hrcA;product=heat-inducible transcription repressor;protein_id=NP_626793.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2755040	2755999	.	-	.	ID=id3165;Dbxref=GeneID:1097989;Note=Pfam match to entry PF01628 HrcA%2C %2C score 483.00%2C E-value 2.4e-141;gbkey=misc_feature;gene=hrcA
NC_003888.3	RefSeq	ribosome_entry_site	2756031	2756037	.	-	.	ID=id3166;gbkey=RBS
NC_003888.3	RefSeq	gene	2756208	2756951	.	+	.	ID=gene2561;Dbxref=GeneID:1097990;Name=SCC77.23;gbkey=Gene;gene=SCC77.23;gene_biotype=protein_coding;gene_synonym=SCC77.23;locus_tag=SCO2556
NC_003888.3	RefSeq	CDS	2756208	2756951	.	+	0	ID=cds2519;Parent=gene2561;Dbxref=Genbank:NP_626794.1,GeneID:1097990;Name=NP_626794.1;Note=SCC77.23%2C unknown%2C len: 247 aa. Similar to Mycobacterium tuberculosis TR:O07720(EMBL:Z97193) hypothetical 26.9 KD protein (250 aa)%2C fasta scores opt: 618 z-score: 666.7 E(): 9.6e-30 45.0%25 identity in 238 aa overlap;gbkey=CDS;gene=SCC77.23;product=hypothetical protein;protein_id=NP_626794.1;transl_table=11
NC_003888.3	RefSeq	gene	2756986	2757810	.	+	.	ID=gene2562;Dbxref=GeneID:1097991;Name=SCC77.24;gbkey=Gene;gene=SCC77.24;gene_biotype=protein_coding;gene_synonym=SCC77.24;locus_tag=SCO2557
NC_003888.3	RefSeq	CDS	2756986	2757810	.	+	0	ID=cds2520;Parent=gene2562;Dbxref=Genbank:NP_626795.1,GeneID:1097991;Name=NP_626795.1;Note=SCC77.24%2C unknown%2C len: 274 aa. Similar to Mycobacterium tuberculosis TR:O53477(EMBL:AL021899) hypothetical 30.5 KD protein (280 aa)%2C fasta scores opt: 1044 z-score: 1136.4 E(): 0 61.9%25 identity in 268 aa overlap.;gbkey=CDS;gene=SCC77.24;product=hypothetical protein;protein_id=NP_626795.1;transl_table=11
NC_003888.3	RefSeq	gene	2757788	2758462	.	-	.	ID=gene2563;Dbxref=GeneID:1097992;Name=SCC77.25c;gbkey=Gene;gene=SCC77.25c;gene_biotype=protein_coding;gene_synonym=SCC77.25c;locus_tag=SCO2558
NC_003888.3	RefSeq	CDS	2757788	2758462	.	-	0	ID=cds2521;Parent=gene2563;Dbxref=Genbank:NP_626796.1,GeneID:1097992;Name=NP_626796.1;Note=SCC77.25c%2C unknown%2C len: 224 aa.;gbkey=CDS;gene=SCC77.25c;product=hypothetical protein;protein_id=NP_626796.1;transl_table=11
NC_003888.3	RefSeq	gene	2758482	2759789	.	-	.	ID=gene2564;Dbxref=GeneID:1097993;Name=SCC77.26c;gbkey=Gene;gene=SCC77.26c;gene_biotype=protein_coding;gene_synonym=SCC77.26c;locus_tag=SCO2559
NC_003888.3	RefSeq	CDS	2758482	2759789	.	-	0	ID=cds2522;Parent=gene2564;Dbxref=Genbank:NP_626797.1,GeneID:1097993;Name=NP_626797.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;gene=SCC77.26c;product=coproporphyrinogen III oxidase;protein_id=NP_626797.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2758722	2758745	.	-	.	ID=id3167;Dbxref=GeneID:1097993;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCC77.26c
NC_003888.3	RefSeq	gene	2759799	2762177	.	-	.	ID=gene2565;Dbxref=GeneID:1097994;Name=SCC77.27c;gbkey=Gene;gene=SCC77.27c;gene_biotype=protein_coding;gene_synonym=SCC77.27c;locus_tag=SCO2560
NC_003888.3	RefSeq	CDS	2759799	2762177	.	-	0	ID=cds2523;Parent=gene2565;Dbxref=Genbank:NP_626798.1,GeneID:1097994;Name=NP_626798.1;Note=SCC77.27c%2C unknown%2C len: 792 aa. Weakly similar to Streptomyces coelicolor TR:O86807 (EMBL:AL031031) regulatory protein SC7C7.02C (916 aa)%2C fasta scores opt: 447 z-score: 376.3 E(): 1.4e-13 34.1%25 identity in 954 aa overlap. The N-terminus is also similar Streptomyces coelicolor TR:Q53897(EMBL:X60316) OrfA within the AbaA pleiotropic regulatory locus for antibiotic production (192 aa)%2C fasta scores opt: 248 z-score: 220.6 E(): 6.7e-05 37.1%25 identity in 178 aa overlap;gbkey=CDS;gene=SCC77.27c;product=hypothetical protein;protein_id=NP_626798.1;transl_table=11
NC_003888.3	RefSeq	gene	2762403	2764346	.	-	.	ID=gene2566;Dbxref=GeneID:1097995;Name=SCC77.28c;gbkey=Gene;gene=SCC77.28c;gene_biotype=protein_coding;gene_synonym=SCC77.28c;locus_tag=SCO2561
NC_003888.3	RefSeq	CDS	2762403	2764346	.	-	0	ID=cds2524;Parent=gene2566;Dbxref=Genbank:NP_626799.1,GeneID:1097995;Name=NP_626799.1;Note=SCC77.28c%2C possible long-chain fatty-acid CoA ligase%2C len: 647 aa. Similar to many from eukaryotes and prokaryotes including: Homo sapiens (Human) SW:LCFB_HUMAN(EMBL:D10040) long-chain-fatty-acid-CoA ligase 2 (EC 6.2.1.3) (698 aa)%2C fasta scores opt: 698 z-score: 755.0 E(): 0 29.6%25 identity in 612 aa overlap and Streptomyces coelicolor TR:Q9X7Z0(EMBL:AL049497) long chain fatty acid CoA ligase SC6G10.04 (598 aa)%2C fasta scores opt: 1056 z-score: 1142.9 E():0 40.5%25 identity in 583 aa overlap. Contains a Pfam match to entry PF00501 AMP-binding and a Prosite hit to PS00455  AMP-binding domain signature.;gbkey=CDS;gene=SCC77.28c;product=long-chain fatty-acid CoA ligase;protein_id=NP_626799.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2762733	2764130	.	-	.	ID=id3168;Dbxref=GeneID:1097995;Note=Pfam match to entry PF00501 AMP-binding%2C %2C score -24.80%2C E-value 5e-14;gbkey=misc_feature;gene=SCC77.28c
NC_003888.3	RefSeq	sequence_feature	2763648	2763683	.	-	.	ID=id3169;Dbxref=GeneID:1097995;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SCC77.28c
NC_003888.3	RefSeq	gene	2764588	2766456	.	-	.	ID=gene2567;Dbxref=GeneID:1097996;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;gene_synonym=lepA,SCC77.29c;locus_tag=SCO2562
NC_003888.3	RefSeq	CDS	2764588	2766456	.	-	0	ID=cds2525;Parent=gene2567;Dbxref=Genbank:NP_626800.1,GeneID:1097996;Name=NP_626800.1;Note=binds to the ribosome on the universally-conserved alpha-sarcin loop;gbkey=CDS;gene=lepA;product=GTP-binding protein LepA;protein_id=NP_626800.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2765275	2766408	.	-	.	ID=id3170;Dbxref=GeneID:1097996;Note=Pfam match to entry PF00009 GTP_EFTU%2C %2C score 338.90%2C E-value 5.8e-98;gbkey=misc_feature;gene=lepA
NC_003888.3	RefSeq	sequence_feature	2766241	2766288	.	-	.	ID=id3171;Dbxref=GeneID:1097996;Note=PS00301 GTP-binding elongation factors signature;gbkey=misc_feature;gene=lepA
NC_003888.3	RefSeq	sequence_feature	2766358	2766381	.	-	.	ID=id3172;Dbxref=GeneID:1097996;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=lepA
NC_003888.3	RefSeq	sequence_feature	2766686	2766789	.	+	.	ID=id3173;Note=520 (+1) 1 104 StC123;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2766694	2766960	.	+	.	ID=gene2568;Dbxref=GeneID:1097997;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;gene_synonym=rspT;locus_tag=SCO2563
NC_003888.3	RefSeq	CDS	2766694	2766960	.	+	0	ID=cds2526;Parent=gene2568;Dbxref=Genbank:NP_626801.1,GeneID:1097997;Name=NP_626801.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=NP_626801.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2766697	2766948	.	+	.	ID=id3174;Dbxref=GeneID:1097997;Note=Pfam match to entry PF01649 Ribosomal_S20p%2C Ribosomal protein S20%2C score 129.10%2C E-value 7.9e-35;gbkey=misc_feature;gene=rpsT
NC_003888.3	RefSeq	gene	2767268	2768278	.	-	.	ID=gene2569;Dbxref=GeneID:1097998;Name=SCC123.02c;gbkey=Gene;gene=SCC123.02c;gene_biotype=protein_coding;gene_synonym=SCC123.02c;locus_tag=SCO2564
NC_003888.3	RefSeq	CDS	2767268	2768278	.	-	0	ID=cds2527;Parent=gene2569;Dbxref=Genbank:NP_626802.1,GeneID:1097998;Name=NP_626802.1;Note=SCC123.02c%2C possible DNA-binding protein%2C len: 336 aa. Highly similar to several proteins of undefined function e.g. Mycobacterium tuberculosis TR:P71730 (EMBL:Z81368) hypothetical 33.1 KD protein (316 aa)%2C fasta scores opt: 792 z-score: 880.3 E():0 42.4%25 identity in 316 aa overlap. Note that codon 21 may be an alternative translational start site. Contains a possible helix-turn-helix motif situated between residues 263..284 (+2.96 SD);gbkey=CDS;gene=SCC123.02c;product=DNA-binding protein;protein_id=NP_626802.1;transl_table=11
NC_003888.3	RefSeq	gene	2768323	2768544	.	-	.	ID=gene2570;Dbxref=GeneID:1097999;Name=SCC123.03c;gbkey=Gene;gene=SCC123.03c;gene_biotype=protein_coding;gene_synonym=SCC123.03c;locus_tag=SCO2565
NC_003888.3	RefSeq	CDS	2768323	2768544	.	-	0	ID=cds2528;Parent=gene2570;Dbxref=Genbank:NP_626803.1,GeneID:1097999;Name=NP_626803.1;Note=SCC123.03c%2C unknown%2C len: 73 aa.;gbkey=CDS;gene=SCC123.03c;product=hypothetical protein;protein_id=NP_626803.1;transl_table=11
NC_003888.3	RefSeq	gene	2768600	2769481	.	-	.	ID=gene2571;Dbxref=GeneID:1098000;Name=SCC123.04c;gbkey=Gene;gene=SCC123.04c;gene_biotype=protein_coding;gene_synonym=SCC123.04c;locus_tag=SCO2566
NC_003888.3	RefSeq	CDS	2768600	2769481	.	-	0	ID=cds2529;Parent=gene2571;Dbxref=Genbank:NP_626804.1,GeneID:1098000;Name=NP_626804.1;Note=SCC123.04c%2C hypothetical protein%2C len: 293 aa. Similar in parts to several proteins of unknown function e.g. Streptomyces coelicolor TR:O86515(EMBL:AL031124) hypothetical 20.0 KD protein (185 aa)%2C fasta scores: opt: 384 z-score: 456.7 E(): 4.7e-18 32.8%25 identity in 180 aa overlap;gbkey=CDS;gene=SCC123.04c;product=hypothetical protein;protein_id=NP_626804.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2769491	2769494	.	-	.	ID=id3175;gbkey=RBS
NC_003888.3	RefSeq	gene	2769878	2772445	.	-	.	ID=gene2572;Dbxref=GeneID:1098001;Name=SCC123.05c;gbkey=Gene;gene=SCC123.05c;gene_biotype=protein_coding;gene_synonym=SCC123.05c;locus_tag=SCO2567
NC_003888.3	RefSeq	CDS	2769878	2772445	.	-	0	ID=cds2530;Parent=gene2572;Dbxref=Genbank:NP_626805.1,GeneID:1098001;Name=NP_626805.1;Note=SCC123.05c%2C possible integral membrane protein%2C len: 855 aa. Similar to Bacillus subtilis SW:CME3_BACSU(EMBL:L15202) ComE operon protein 3%2C required for the binding and uptake of transforming DNA (776 aa)%2C fasta scores opt: 355 z-score: 368.7 E(): 3.8e-13 26.3%25 identity in 635 aa overlap and Mycobacterium tuberculosis TR:P71729(EMBL:Z81368) hypothetical 52.8 KD protein (514 aa)%2C fasta scores opt: 450 z-score: 470.1 E(): 8.5e-19 35.2%25 identity in 546 aa overlap. Contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCC123.05c;product=hypothetical protein;protein_id=NP_626805.1;transl_table=11
NC_003888.3	RefSeq	gene	2772442	2773509	.	-	.	ID=gene2573;Dbxref=GeneID:1098002;Name=SCC123.06c;gbkey=Gene;gene=SCC123.06c;gene_biotype=protein_coding;gene_synonym=SCC123.06c;locus_tag=SCO2568
NC_003888.3	RefSeq	CDS	2772442	2773509	.	-	0	ID=cds2531;Parent=gene2573;Dbxref=Genbank:NP_626806.1,GeneID:1098002;Name=NP_626806.1;Note=SCC123.06c%2C possible DNA-binding protein%2C len: 355 aa. Similar to Mycobacterium tuberculosis TR:P71728 (EMBL:Z81368) hypothetical 30.5 KD protein (297 aa)%2C opt: 271 z-score: 260.6 E(): 4e-07 36.3%25 identity in 292 aa overlap. Also similar in parts to Bacillus subtilis SW:CME1_BACSU (EMBL:L15202) ComE operon protein 1%2C required for the binding and uptake of transforming DNA (205 aa)%2C fasta scores opt: 295 z-score: 284.5 E(): 1.9e-08 32.2%25 identity in 180 aa overlap. Contains a Pfam match to entry PF00633 HHH%2C Helix-hairpin-helix motif and a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCC123.06c;product=DNA-binding protein;protein_id=NP_626806.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2772544	2772633	.	-	.	ID=id3176;Dbxref=GeneID:1098002;Note=Pfam match to entry PF00633 HHH%2C Helix-hairpin-helix motif.%2C score 25.80%2C E-value 0.001;gbkey=misc_feature;gene=SCC123.06c
NC_003888.3	RefSeq	ribosome_entry_site	2773525	2773530	.	-	.	ID=id3177;gbkey=RBS
NC_003888.3	RefSeq	gene	2773654	2774499	.	-	.	ID=gene2574;Dbxref=GeneID:1098003;Name=SCC123.07c;gbkey=Gene;gene=SCC123.07c;gene_biotype=protein_coding;gene_synonym=SCC123.07c;locus_tag=SCO2569
NC_003888.3	RefSeq	CDS	2773654	2774499	.	-	0	ID=cds2532;Parent=gene2574;Dbxref=Genbank:NP_626807.1,GeneID:1098003;Name=NP_626807.1;Note=SCC123.07c%2C unknown%2C len: 281 aa. Similar to several proteins of undefined function including: Bacillus subtilis SW:DEGV_BACSU(EMBL:Z18629) DegV protein (281 aa)%2C fasta scores opt: 549 z-score: 626.7 E(): 1.6e-27 37.1%25 identity in 278 aa overlap and Mycobacterium tuberculosis TR:P71726 (EMBL:Z81368) hypothetical 28.5 KD protein (280 aa)%2C fasta scores opt: 579 z-score: 660.5 E(): 2.1e-29 38.3%25 identity in 274 aa overlap;gbkey=CDS;gene=SCC123.07c;product=hypothetical protein;protein_id=NP_626807.1;transl_table=11
NC_003888.3	RefSeq	gene	2774591	2775367	.	-	.	ID=gene2575;Dbxref=GeneID:1098004;Name=SCC123.08c;gbkey=Gene;gene=SCC123.08c;gene_biotype=protein_coding;gene_synonym=SCC123.08c;locus_tag=SCO2570
NC_003888.3	RefSeq	CDS	2774591	2775367	.	-	0	ID=cds2533;Parent=gene2575;Dbxref=Genbank:NP_626808.1,GeneID:1098004;Name=NP_626808.1;Note=SCC123.08c%2C possible hypothetical protein%2C len: 258 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC123.08c;product=hypothetical protein;protein_id=NP_626808.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2775374	2775378	.	-	.	ID=id3178;gbkey=RBS
NC_003888.3	RefSeq	gene	2775536	2778436	.	-	.	ID=gene2576;Dbxref=GeneID:1098005;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=SCO2571
NC_003888.3	RefSeq	CDS	2775536	2778436	.	-	0	ID=cds2534;Parent=gene2576;Dbxref=Genbank:NP_626809.1,GeneID:1098005;Name=NP_626809.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=NP_626809.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2775959	2778343	.	-	.	ID=id3179;Dbxref=GeneID:1098005;Note=Pfam match to entry PF00133 tRNA-synt_1%2C tRNA synthetases class I (I%2C L%2C M and V)%2C score 290.40%2C E-value 2.2e-83;gbkey=misc_feature;gene=leuS
NC_003888.3	RefSeq	sequence_feature	2778188	2778220	.	-	.	ID=id3180;Dbxref=GeneID:1098005;Note=PS00178 Amino-acyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=leuS
NC_003888.3	RefSeq	ribosome_entry_site	2778448	2778451	.	-	.	ID=id3181;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2778962	2778966	.	+	.	ID=id3182;gbkey=RBS
NC_003888.3	RefSeq	gene	2778973	2780259	.	+	.	ID=gene2577;Dbxref=GeneID:1098006;Name=SCC123.10;gbkey=Gene;gene=SCC123.10;gene_biotype=protein_coding;gene_synonym=SCC123.10;locus_tag=SCO2572
NC_003888.3	RefSeq	CDS	2778973	2780259	.	+	0	ID=cds2535;Parent=gene2577;Dbxref=Genbank:NP_626810.1,GeneID:1098006;Name=NP_626810.1;Note=SCC123.10%2C possible integral membrane protein%2C len: 428 aa. Contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC123.10;product=hypothetical protein;protein_id=NP_626810.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2780282	2780287	.	+	.	ID=id3183;gbkey=RBS
NC_003888.3	RefSeq	gene	2780292	2781866	.	+	.	ID=gene2578;Dbxref=GeneID:1098007;Name=SCC123.11;gbkey=Gene;gene=SCC123.11;gene_biotype=protein_coding;gene_synonym=SCC123.11;locus_tag=SCO2573
NC_003888.3	RefSeq	CDS	2780292	2781866	.	+	0	ID=cds2536;Parent=gene2578;Dbxref=Genbank:NP_626811.1,GeneID:1098007;Name=NP_626811.1;Note=SCC123.11%2C possible oxidoreductase%2C len: 524 aa. Weakly similar to several including: Homo sapiens (Human) SW:NUBM_HUMAN(EMBL:Y17379) NADH-ubiquinone oxidoreductase 51 KD subunit precursor (EC 1.6.5.3) (464 aa)%2C fasta scores opt: 341 z-score: 369.2 E(): 3.6e-13 27.1%25 identity in 365 aa overlap and Streptomyces coelicolor TR:Q9XAQ9(EMBL:AL078618) NADH dehydrogenase subunit%2C NuoF (449 aa)%2C fasta scores opt: 398 z-score: 430.5 E(): 1.4e-16 26.5%25 identity in 392 aa overlap.;gbkey=CDS;gene=SCC123.11;product=oxidoreductase;protein_id=NP_626811.1;transl_table=11
NC_003888.3	RefSeq	gene	2781922	2781994	.	-	.	ID=gene2579;Dbxref=GeneID:3240014;Name=SCOt14;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt14
NC_003888.3	RefSeq	tRNA	2781922	2781994	.	-	.	ID=rna20;Parent=gene2579;Dbxref=GeneID:3240014;Note=tRNA Ala anticodon GGC%2C Cove score 82.18;gbkey=tRNA;product=tRNA-Ala
NC_003888.3	RefSeq	exon	2781922	2781994	.	-	.	ID=id3184;Parent=rna20;Dbxref=GeneID:3240014;Note=tRNA Ala anticodon GGC%2C Cove score 82.18;gbkey=tRNA;product=tRNA-Ala
NC_003888.3	RefSeq	gene	2782151	2782384	.	-	.	ID=gene2580;Dbxref=GeneID:1098008;Name=SCC123.12c;gbkey=Gene;gene=SCC123.12c;gene_biotype=protein_coding;gene_synonym=SCC123.12c;locus_tag=SCO2574
NC_003888.3	RefSeq	CDS	2782151	2782384	.	-	0	ID=cds2537;Parent=gene2580;Dbxref=Genbank:NP_626812.1,GeneID:1098008;Name=NP_626812.1;Note=SCC123.12c%2C doubtful CDS%2C len: 77 aa.;gbkey=CDS;gene=SCC123.12c;product=hypothetical protein;protein_id=NP_626812.1;transl_table=11
NC_003888.3	RefSeq	gene	2782388	2782615	.	-	.	ID=gene2581;Dbxref=GeneID:1098009;Name=SCC123.13c;gbkey=Gene;gene=SCC123.13c;gene_biotype=protein_coding;gene_synonym=SCC123.13c;locus_tag=SCO2575
NC_003888.3	RefSeq	CDS	2782388	2782615	.	-	0	ID=cds2538;Parent=gene2581;Dbxref=Genbank:NP_626813.1,GeneID:1098009;Name=NP_626813.1;Note=SCC123.13c%2C doubtful CDS%2C len: 75 aa.;gbkey=CDS;gene=SCC123.13c;product=hypothetical protein;protein_id=NP_626813.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2782392	2782395	.	-	.	ID=id3185;Dbxref=GeneID:1098009;gbkey=RBS;gene=SCC123.13c
NC_003888.3	RefSeq	gene	2782760	2782835	.	-	.	ID=gene2582;Dbxref=GeneID:3240015;Name=SCOt15;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt15
NC_003888.3	RefSeq	tRNA	2782760	2782835	.	-	.	ID=rna21;Parent=gene2582;Dbxref=GeneID:3240015;Note=tRNA Ala anticodon GGC%2C Cove score 82.80;gbkey=tRNA;product=tRNA-Ala
NC_003888.3	RefSeq	exon	2782760	2782835	.	-	.	ID=id3186;Parent=rna21;Dbxref=GeneID:3240015;Note=tRNA Ala anticodon GGC%2C Cove score 82.80;gbkey=tRNA;product=tRNA-Ala
NC_003888.3	RefSeq	gene	2782944	2783615	.	-	.	ID=gene2583;Dbxref=GeneID:1098010;Name=pgm2;gbkey=Gene;gene=pgm2;gene_biotype=protein_coding;gene_synonym=pgm2,SCC123.14c;locus_tag=SCO2576
NC_003888.3	RefSeq	CDS	2782944	2783615	.	-	0	ID=cds2539;Parent=gene2583;Dbxref=Genbank:NP_626814.1,GeneID:1098010;Name=NP_626814.1;Note=SCC123.14c%2C pgm2%2C phosphoglycerate mutase%2C len: 223 aa. Highly similar to several other phosphoglycerate mutases including: Escherichia coli SW:PMG2_ECOLI (EMBL:M97495) GpmB (215 aa)%2C fasta scores opt: 252 z-score: 313.8 E(): 4.4e-10 32.5%25 identity in 194 aa overlap and Deinococcus radiodurans TR:AAF10667(EMBL:AE001959) (232 aa)%2C fasta scores opt: 317 z-score: 392.0 E(): 1.9e-14 41.5%25 identity in 193 aa overlap. Contains a Prosite hit to PS00175 Phosphoglycerate mutase family phosphohistidine signature and a Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family.;gbkey=CDS;gene=pgm2;product=phosphoglycerate mutase;protein_id=NP_626814.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2783244	2783561	.	-	.	ID=id3187;Dbxref=GeneID:1098010;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 83.90%2C E-value 2.4e-21;gbkey=misc_feature;gene=pgm2
NC_003888.3	RefSeq	sequence_feature	2783529	2783558	.	-	.	ID=id3188;Dbxref=GeneID:1098010;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature;gbkey=misc_feature;gene=pgm2
NC_003888.3	RefSeq	gene	2783612	2784058	.	-	.	ID=gene2584;Dbxref=GeneID:1098011;Name=SCC123.15c;gbkey=Gene;gene=SCC123.15c;gene_biotype=protein_coding;gene_synonym=SCC123.15c;locus_tag=SCO2577
NC_003888.3	RefSeq	CDS	2783612	2784058	.	-	0	ID=cds2540;Parent=gene2584;Dbxref=Genbank:NP_626815.1,GeneID:1098011;Name=NP_626815.1;Note=SCC123.15c%2C unknown%2C len: 148 aa. Highly similar to several proteins of undefined function including: Bacillus subtilis SW:YQEL_BACSU(EMBL:D84432) YqeL (118 aa)%2C fasta scores opt: 286 z-score: 365.1 E(): 6e-13 42.6%25 identity in 108 aa overlap and Mycobacterium tuberculosis TR:O86327(EMBL:Z81368) (126 aa)%2C fasta scores opt: 441 z-score: 553.8 E(): 1.9e-23 51.9%25 identity in 129 aa overlap;gbkey=CDS;gene=SCC123.15c;product=hypothetical protein;protein_id=NP_626815.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2783622	2783625	.	-	.	ID=id3189;Dbxref=GeneID:1098011;gbkey=RBS;gene=SCC123.15c
NC_003888.3	RefSeq	gene	2784151	2785929	.	-	.	ID=gene2585;Dbxref=GeneID:1098012;Name=SCC123.16c;gbkey=Gene;gene=SCC123.16c;gene_biotype=protein_coding;gene_synonym=SCC123.16c;locus_tag=SCO2578
NC_003888.3	RefSeq	CDS	2784151	2785929	.	-	0	ID=cds2541;Parent=gene2585;Dbxref=Genbank:NP_626816.1,GeneID:1098012;Name=NP_626816.1;Note=SCC123.16c%2C possible membrane protein%2C len: 592 aa. Contains a possible membrane spanning hydrophobic domain. The protein is rich in the amino acid Gln and has a notable repeat region with 6x QQ(G/Y) between residues 53..84.;gbkey=CDS;gene=SCC123.16c;product=hypothetical protein;protein_id=NP_626816.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2785680	2785772	.	-	.	ID=id3190;Dbxref=GeneID:1098012;Note=degenerate repeat region containing a 7x [(A/C)(G/C)GGGCAGC] repeat.;gbkey=repeat_region;gene=SCC123.16c
NC_003888.3	RefSeq	ribosome_entry_site	2785937	2785940	.	-	.	ID=id3191;gbkey=RBS
NC_003888.3	RefSeq	gene	2785946	2786662	.	-	.	ID=gene2586;Dbxref=GeneID:1098013;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;gene_synonym=SCC123.17c;locus_tag=SCO2579
NC_003888.3	RefSeq	CDS	2785946	2786662	.	-	0	ID=cds2542;Parent=gene2586;Dbxref=Genbank:NP_626817.1,GeneID:1098013;Name=NP_626817.1;Note=transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria;gbkey=CDS;gene=nadD;product=nicotinic acid mononucleotide adenylyltransferase;protein_id=NP_626817.1;transl_table=11
NC_003888.3	RefSeq	gene	2786722	2786889	.	-	.	ID=gene2587;Dbxref=GeneID:1098014;Name=SCC123.18c;gbkey=Gene;gene=SCC123.18c;gene_biotype=protein_coding;gene_synonym=SCC123.18c;locus_tag=SCO2580
NC_003888.3	RefSeq	CDS	2786722	2786889	.	-	0	ID=cds2543;Parent=gene2587;Dbxref=Genbank:NP_626818.1,GeneID:1098014;Name=NP_626818.1;Note=SCC123.18c%2C possible membrane protein%2C len: 55 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCC123.18c;product=hypothetical protein;protein_id=NP_626818.1;transl_table=11
NC_003888.3	RefSeq	gene	2786987	2787181	.	-	.	ID=gene2588;Dbxref=GeneID:1098015;Name=SCC123.19c;gbkey=Gene;gene=SCC123.19c;gene_biotype=protein_coding;gene_synonym=SCC123.19c;locus_tag=SCO2581
NC_003888.3	RefSeq	CDS	2786987	2787181	.	-	0	ID=cds2544;Parent=gene2588;Dbxref=Genbank:NP_626819.1,GeneID:1098015;Name=NP_626819.1;Note=SCC123.19c%2C possible membrane protein%2C len: 64 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCC123.19c;product=hypothetical protein;protein_id=NP_626819.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2787187	2787190	.	-	.	ID=id3192;gbkey=RBS
NC_003888.3	RefSeq	gene	2787290	2788498	.	+	.	ID=gene2589;Dbxref=GeneID:1098016;Name=SCC123.20;gbkey=Gene;gene=SCC123.20;gene_biotype=protein_coding;gene_synonym=SCC123.20;locus_tag=SCO2582
NC_003888.3	RefSeq	CDS	2787290	2788498	.	+	0	ID=cds2545;Parent=gene2589;Dbxref=Genbank:NP_626820.1,GeneID:1098016;Name=NP_626820.1;Note=SCC123.20%2C unknown%2C len: 402 aa. Similar to Mycobacterium tuberculosis TR:O53978(EMBL:AL022073) hypothetical 38.3 KD protein (348 aa)%2C fasta scores opt: 1044 z-score: 981.9 E():0 49.5%25 identity in 319 aa overlap and Synechocystis sp. (strain PCC 6803) TR:P73529(EMBL:D90907) hypothetical 34.0 KD protein (303 aa)%2C fasta scores opt: 568 z-score: 540.3 E(): 1.1e-22 37.5%25 identity in 269 aa overlap.;gbkey=CDS;gene=SCC123.20;product=hypothetical protein;protein_id=NP_626820.1;transl_table=11
NC_003888.3	RefSeq	gene	2788512	2789582	.	-	.	ID=gene2590;Dbxref=GeneID:1098017;Name=SCC123.21c;gbkey=Gene;gene=SCC123.21c;gene_biotype=protein_coding;gene_synonym=SCC123.21c;locus_tag=SCO2583
NC_003888.3	RefSeq	CDS	2788512	2789582	.	-	0	ID=cds2546;Parent=gene2590;Dbxref=Genbank:NP_626821.1,GeneID:1098017;Name=NP_626821.1;Note=SCC123.21c%2C possible membrane protein%2C len: 356 aa. similar to TR:Q9L0J6 (EMBL:AL161691) SCD40A.15 membrane protein from Streptomyces coelicolor (379 aa) fasta scores%3B opt: 350%2C Z-score: 385.8%2C E(): 7.4e-14%2C 30.056%25 identity (33.025%25 ungapped) in 356 aa overlap. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCC123.21c;product=hypothetical protein;protein_id=NP_626821.1;transl_table=11
NC_003888.3	RefSeq	gene	2789669	2790355	.	-	.	ID=gene2591;Dbxref=GeneID:1098018;Name=SCC123.22c;gbkey=Gene;gene=SCC123.22c;gene_biotype=protein_coding;gene_synonym=SCC123.22c;locus_tag=SCO2584
NC_003888.3	RefSeq	CDS	2789669	2790355	.	-	0	ID=cds2547;Parent=gene2591;Dbxref=Genbank:NP_626822.1,GeneID:1098018;Name=NP_626822.1;Note=SCC123.22c%2C possible membrane protein%2C len: 228 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCC123.22c;product=hypothetical protein;protein_id=NP_626822.1;transl_table=11
NC_003888.3	RefSeq	gene	2790362	2791648	.	-	.	ID=gene2592;Dbxref=GeneID:1098019;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=SCO2585
NC_003888.3	RefSeq	CDS	2790362	2791648	.	-	0	ID=cds2548;Parent=gene2592;Dbxref=Genbank:NP_626823.1,GeneID:1098019;Name=NP_626823.1;Note=Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway;gbkey=CDS;gene=proA;product=gamma-glutamyl phosphate reductase;protein_id=NP_626823.1;transl_table=11
NC_003888.3	RefSeq	gene	2791720	2792250	.	-	.	ID=gene2593;Dbxref=GeneID:1098020;Name=SCC123.24c;gbkey=Gene;gene=SCC123.24c;gene_biotype=protein_coding;gene_synonym=SCC123.24c;locus_tag=SCO2586
NC_003888.3	RefSeq	CDS	2791720	2792250	.	-	0	ID=cds2549;Parent=gene2593;Dbxref=Genbank:NP_626824.1,GeneID:1098020;Name=NP_626824.1;Note=SCC123.24c%2C unknown%2C len: 176 aa.;gbkey=CDS;gene=SCC123.24c;product=hypothetical protein;protein_id=NP_626824.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2792256	2792260	.	-	.	ID=id3193;gbkey=RBS
NC_003888.3	RefSeq	gene	2792386	2793510	.	-	.	ID=gene2594;Dbxref=GeneID:1098021;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;gene_synonym=proB;locus_tag=SCO2587
NC_003888.3	RefSeq	CDS	2792386	2793510	.	-	0	ID=cds2550;Parent=gene2594;Dbxref=Genbank:NP_626825.1,GeneID:1098021;Name=NP_626825.1;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;gbkey=CDS;gene=proB;product=gamma-glutamyl kinase;protein_id=NP_626825.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2792446	2792670	.	-	.	ID=id3194;Dbxref=GeneID:1098021;Note=Pfam match to entry PF01472 PUA%2C PUA domain%2C score 60.90%2C E-value 2.7e-14;gbkey=misc_feature;gene=proB
NC_003888.3	RefSeq	sequence_feature	2792902	2793477	.	-	.	ID=id3195;Dbxref=GeneID:1098021;Note=Pfam match to entry PF00696 aakinase%2C Aspartate kinases%2C Glutamate kinases and Gamma glutamate phospho-reductases%2C score 222.50%2C E-value 6.3e-63;gbkey=misc_feature;gene=proB
NC_003888.3	RefSeq	repeat_region	2793791	2794439	.	+	.	ID=id3196;Note=degenerate multiple repeat region.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2794753	2796912	.	+	.	ID=gene2595;Dbxref=GeneID:1098022;Name=SCC123.26;gbkey=Gene;gene=SCC123.26;gene_biotype=protein_coding;gene_synonym=SCC123.26;locus_tag=SCO2588
NC_003888.3	RefSeq	CDS	2794753	2796912	.	+	0	ID=cds2551;Parent=gene2595;Dbxref=Genbank:NP_626826.1,GeneID:1098022;Name=NP_626826.1;Note=SCC123.26%2C possible integral membrane protein%2C len: 719 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC123.26;product=hypothetical protein;protein_id=NP_626826.1;transl_table=11
NC_003888.3	RefSeq	gene	2797141	2799372	.	+	.	ID=gene2596;Dbxref=GeneID:1098023;Name=SCC123.27;gbkey=Gene;gene=SCC123.27;gene_biotype=protein_coding;gene_synonym=SCC123.27;locus_tag=SCO2589
NC_003888.3	RefSeq	CDS	2797141	2799372	.	+	0	ID=cds2552;Parent=gene2596;Dbxref=Genbank:NP_626827.1,GeneID:1098023;Name=NP_626827.1;Note=SCC123.27%2C possible glycosyl transferase%2C len: 743 aa. Weakly similar to Staphylococcus epidermidis TR:AAD56434(EMBL:AF162863) poly(glycerolphosphate) glycerophosphotransferase%2C TagF (721 aa)%2C fasta scores opt: 564 z-score: 661.8 E(): 1.8e-29 27.4%25 identity in 731 aa overlap and Bacillus subtilis SW:TAGF_BACSU(EMBL:X15200) teichoic acid biosynthesis protein%2C TagF (746 aa)%2C fasta scores opt: 567 z-score: 665.1 E(): 1.2e-29 30.9%25 identity in 417 aa overlap. Also similar to the adjoining gene fragment%2C CDS SCC123.28 (> 97 aa)%2C fasta scores opt: 298 z-score: 353.4 E(): 2.9e-14 47.9%25 identity in 96 aa overlap. Contains a Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=SCC123.27;product=glycosyl transferase;protein_id=NP_626827.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2797153	2797641	.	+	.	ID=id3197;Dbxref=GeneID:1098023;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 98.70%2C E-value 1.2e-25;gbkey=misc_feature;gene=SCC123.27
NC_003888.3	RefSeq	gene	2799396	2802989	.	+	.	ID=gene2597;Dbxref=GeneID:1098024;Name=SCC123.28;gbkey=Gene;gene=SCC123.28;gene_biotype=protein_coding;gene_synonym=SCC123.28,SCC88.01;locus_tag=SCO2590
NC_003888.3	RefSeq	CDS	2799396	2802989	.	+	0	ID=cds2553;Parent=gene2597;Dbxref=Genbank:NP_733577.1,GeneID:1098024;Name=NP_733577.1;Note=SCC88.01 possible glycosyltransferase%2C len: >1135 aa%3B N-terminal region similar to TR:Q9XC92 (EMBL:AF146532) Klebsiella pneumoniae glycosyltransferase%2C 329 aa%3B fasta scores: opt: 214 z-score: 245.4 E(): 3e-06%3B 21.3%25 identity in 263 aa overlap and C-terminal region similar to SW:TAGF_BACSU (EMBL:X15200) Bacillus subtilis teichoic acid biosynthesis protein F TagF%2C 746 aa%3B fasta scores: opt: 1056 z-score: 1203.0 E(): 0%3B 41.5%25 identity in 381 aa overlap~SCC123.28%2C possible glycosyl transferase%2C partial CDS%2C len: > 97 aa. Similar to several proteins associated with polysaccharide biosynthesis e.g. Lactococcus lactis TR:O06035(EMBL:AF036485) galactosyltransferase%2C EpsG (316 aa)%2C fasta scores opt: 309 z-score: 414.0 E(): 1.1e-15 47.4%25 identity in 95 aa overlap and Streptococcus suis TR:Q9X4V4(EMBL:AF118389) glycosyltransferase%2C Cps2J (332 aa)%2C fasta scores opt: 309 z-score: 413.6 E(): 1.2e-15 46.8%25 identity in 94 aa overlap. Also similar to the adjoining CDS%2C SCC123.27 (743 aa)%2C fasta scores opt: 298 z-score: 353.4 E(): 2.9e-14 47.9%25 identity in 96 aa overlap.;gbkey=CDS;gene=SCC123.28;product=glycosyltransferase;protein_id=NP_733577.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	2802996	2803040	.	+	.	ID=id3198;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2803160	2804890	.	+	.	ID=gene2598;Dbxref=GeneID:1098025;Name=SCC88.02;gbkey=Gene;gene=SCC88.02;gene_biotype=protein_coding;gene_synonym=SCC88.02;locus_tag=SCO2591
NC_003888.3	RefSeq	CDS	2803160	2804890	.	+	0	ID=cds2554;Parent=gene2598;Dbxref=Genbank:NP_626828.1,GeneID:1098025;Name=NP_626828.1;Note=SCC88.02. possible hypothetical protein%2C len: 576 aa%3B similar to TR:CAB51964 (EMBL:AL109661) Streptomyces coelicolor hypothetical 100.7 kD protein SC6E10.10%2C 943 aa%3B fasta scores: opt: 522 z-score: 556.2 E(): 1.4e-23%3B 31.8%25 identity in 471 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC88.02;product=hypothetical protein;protein_id=NP_626828.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	2804907	2804942	.	+	.	ID=id3199;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2804967	2807795	.	-	.	ID=gene2599;Dbxref=GeneID:1098026;Name=SCC88.03c;gbkey=Gene;gene=SCC88.03c;gene_biotype=protein_coding;gene_synonym=SCC88.03c;locus_tag=SCO2592
NC_003888.3	RefSeq	CDS	2804967	2807795	.	-	0	ID=cds2555;Parent=gene2599;Dbxref=Genbank:NP_626829.1,GeneID:1098026;Name=NP_626829.1;Note=SCC88.03c%2C possible transferase%2C len: 942 aa%3B N-terminal region similar to hypothetical proteins%2C e. g. TR:O69853 (EMBL:AL023702) Streptomyces coelicolor hypothetical 66.0 kD protein SC1C3.11%2C 586 aa%3B fasta scores: opt: 1214 z-score: 1395.6 E(): 0%3B 40.7%25 identity in 573 aa overlap and C-terminal region similar to TR:O69854 (EMBL:AL023702) Streptomyces coelicolor transferase SC1C3.12%2C 697 aa%3B fasta scores: opt: 658 z-score: 754.0 E(): 0%3B 30.1%25 identity in 574 aa overlap. Contains Pfam match at N-terminal region to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1;gbkey=CDS;gene=SCC88.03c;product=transferase;protein_id=NP_626829.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2806704	2807150	.	-	.	ID=id3200;Dbxref=GeneID:1098026;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 99.70%2C E-value 2.1e-27;gbkey=misc_feature;gene=SCC88.03c
NC_003888.3	RefSeq	gene	2807802	2808791	.	-	.	ID=gene2600;Dbxref=GeneID:1098027;Name=SCC88.04c;gbkey=Gene;gene=SCC88.04c;gene_biotype=protein_coding;gene_synonym=SCC88.04c;locus_tag=SCO2593
NC_003888.3	RefSeq	CDS	2807802	2808791	.	-	0	ID=cds2556;Parent=gene2600;Dbxref=Genbank:NP_626830.1,GeneID:1098027;Name=NP_626830.1;Note=SCC88.04c%2C unknown%2C len: 329 aa;gbkey=CDS;gene=SCC88.04c;product=hypothetical protein;protein_id=NP_626830.1;transl_table=11
NC_003888.3	RefSeq	gene	2808791	2810599	.	-	.	ID=gene2601;Dbxref=GeneID:1098028;Name=SCC88.05c;gbkey=Gene;gene=SCC88.05c;gene_biotype=protein_coding;gene_synonym=SCC88.05c;locus_tag=SCO2594
NC_003888.3	RefSeq	CDS	2808791	2810599	.	-	0	ID=cds2557;Parent=gene2601;Dbxref=Genbank:NP_626831.1,GeneID:1098028;Name=NP_626831.1;Note=SCC88.05c%2C hypothetical protein%2C len: 586 aa%3B similar to various hypothetical proteins%2C e.g. TR:O69853 (EMBL:AL023702) Streptomyces coelicolor hypothetical 66.0 kD protein SC1C3.11%2C 586 aa%3B fasta scores: opt: 1251 z-score: 1446.9 E(): 0%3B 46.5%25 identity in 600 aa overlap;gbkey=CDS;gene=SCC88.05c;product=hypothetical protein;protein_id=NP_626831.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2810608	2810614	.	-	.	ID=id3201;gbkey=RBS
NC_003888.3	RefSeq	gene	2810811	2812247	.	-	.	ID=gene2602;Dbxref=GeneID:1098029;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=SCO2595
NC_003888.3	RefSeq	CDS	2810811	2812247	.	-	0	ID=cds2558;Parent=gene2602;Dbxref=Genbank:NP_626832.1,GeneID:1098029;Name=NP_626832.1;Note=essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase ObgE;protein_id=NP_626832.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2810811	2812247	.	-	.	ID=id3202;Dbxref=GeneID:1098029;Note=previously sequenced fragment (EMBL:D87915);gbkey=misc_feature;gene=obgE
NC_003888.3	RefSeq	sequence_feature	2811126	2812199	.	-	.	ID=id3203;Dbxref=GeneID:1098029;Note=Pfam match to entry PF01018 GTP1_OBG%2C GTP1/OBG family%2C score 548.50%2C E-value 4.4e-161;gbkey=misc_feature;gene=obgE
NC_003888.3	RefSeq	sequence_feature	2811729	2811752	.	-	.	ID=id3204;Dbxref=GeneID:1098029;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=obgE
NC_003888.3	RefSeq	ribosome_entry_site	2812256	2812260	.	-	.	ID=id3205;gbkey=RBS
NC_003888.3	RefSeq	gene	2812358	2812612	.	-	.	ID=gene2603;Dbxref=GeneID:1098030;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;gene_synonym=SCC88.07c;locus_tag=SCO2596
NC_003888.3	RefSeq	CDS	2812358	2812612	.	-	0	ID=cds2559;Parent=gene2603;Dbxref=Genbank:NP_626833.1,GeneID:1098030;Name=NP_626833.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=NP_626833.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2812370	2812609	.	-	.	ID=id3206;Dbxref=GeneID:1098030;Note=Pfam match to entry PF01016 Ribosomal_L27%2C Ribosomal L27 protein%2C score 191.00%2C E-value 1.9e-53;gbkey=misc_feature;gene=rpmA
NC_003888.3	RefSeq	sequence_feature	2812469	2812513	.	-	.	ID=id3207;Dbxref=GeneID:1098030;Note=PS00831 Ribosomal protein L27 signature;gbkey=misc_feature;gene=rpmA
NC_003888.3	RefSeq	ribosome_entry_site	2812615	2812620	.	-	.	ID=id3208;gbkey=RBS
NC_003888.3	RefSeq	gene	2812627	2812947	.	-	.	ID=gene2604;Dbxref=GeneID:1098031;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;gene_synonym=SCC88.08c;locus_tag=SCO2597
NC_003888.3	RefSeq	CDS	2812627	2812947	.	-	0	ID=cds2560;Parent=gene2604;Dbxref=Genbank:NP_626834.1,GeneID:1098031;Name=NP_626834.1;Note=SCC88.08c%2C rplU%2C 50S ribosomal protein L21%2C len: 106 aa%3B identical to TR:P95756 (EMBL:D87916) Streptomyces griseus ribosomal protein L21 RplU%2C 106 aa and highly similar to SW:RL21_ECOLI (EMBL:D13267) Escherichia coli 50S ribosomal protein L21%2C RplU%2C 103 aa%3B fasta scores: opt: 272 z-score: 350.3 E(): 4.3e-12%3B 38.1%25 identity in 105 aa overlap. Contains Pfam match to entry PF00829 Ribosomal_L21p%2C Ribosomal prokaryotic L21 protein;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=NP_626834.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2812660	2812947	.	-	.	ID=id3209;Dbxref=GeneID:1098031;Note=Pfam match to entry PF00829 Ribosomal_L21p%2C Ribosomal prokaryotic L21 protein%2C score 176.90%2C E-value 3.2e-49;gbkey=misc_feature;gene=rplU
NC_003888.3	RefSeq	gene	2813146	2814168	.	-	.	ID=gene2605;Dbxref=GeneID:1098032;Name=SCC88.09c;gbkey=Gene;gene=SCC88.09c;gene_biotype=protein_coding;gene_synonym=SCC88.09c;locus_tag=SCO2598
NC_003888.3	RefSeq	CDS	2813146	2814168	.	-	0	ID=cds2561;Parent=gene2605;Dbxref=Genbank:NP_626835.1,GeneID:1098032;Name=NP_626835.1;Note=SCC88.09c%2C probable dehydrogenase%2C len: 340 aa%3B highly similar to TR:Q9X7U9 (EMBL:AL049485) Streptomyces coelicolor  glycerol dehydrogenase SC6A5.03%2C 340 aa%3B fasta scores: opt: 1734 z-score: 1970.7 E(): 0%3B 75.4%25 identity in 338 aa overlap and to SW:GLDA_PSEPU (EMBL:U08463) Pseudomonas putida glycerol dehydrogenase (EC 1.1.1.6) GldA%2C 365 aa%3B fasta scores: opt: 262 z-score: 302.6 E(): 1.9e-09%3B 25.7%25 identity in 335 aa overlap;gbkey=CDS;gene=SCC88.09c;product=dehydrogenase;protein_id=NP_626835.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2814212	2814217	.	-	.	ID=id3210;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	2814278	2814325	.	-	.	ID=id3211;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2814360	2818382	.	-	.	ID=gene2606;Dbxref=GeneID:1098033;Name=SCC88.10c;gbkey=Gene;gene=SCC88.10c;gene_biotype=protein_coding;gene_synonym=SCC88.10c;locus_tag=SCO2599
NC_003888.3	RefSeq	CDS	2814360	2818382	.	-	0	ID=cds2562;Parent=gene2606;Dbxref=Genbank:NP_626836.1,GeneID:1098033;Name=NP_626836.1;Note=SCC88.10c%2C hypothetical protein%2C len: 1340 aa%3B N-terminal region similar to TR:P71905 (EMBL:Z81451%3B) Mycobacterium tuberculosis hypothetical 103.4 kD protein%2C 953 aa%3B fasta scores: opt: 1098 z-score: 829.0 E(): 0%3B 48.7%25 identity in 881 aa overlap and C-terminal region similar to SW:CAFA_ECOLI (EMBL:X57166) Escherichia coli ribonuclease G%2C cytoplasmic axial filament protein CafA%2C 488 aa%3B fasta scores: opt: 996 z-score: 756.6 E(): 0%3B 39.0%25 identity in 405 aa overlap. Contains match to Prosite entry PS00107 Protein kinases ATP-binding region signature and possible coiled-coil region. Contains also two repeats: 10x(A/T)(T/A)KK and 4x(PEPAAA);gbkey=CDS;gene=SCC88.10c;product=hypothetical protein;protein_id=NP_626836.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2814414	2814587	.	-	.	ID=id3212;Dbxref=GeneID:1098033;Note=10x(A/T)(A/T)KK repeat;gbkey=repeat_region;gene=SCC88.10c
NC_003888.3	RefSeq	sequence_feature	2816421	2816519	.	-	.	ID=id3213;Dbxref=GeneID:1098033;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCC88.10c
NC_003888.3	RefSeq	repeat_region	2817846	2817917	.	-	.	ID=id3214;Dbxref=GeneID:1098033;Note=4x (PEPAAA) repeat;gbkey=repeat_region;gene=SCC88.10c
NC_003888.3	RefSeq	ribosome_entry_site	2818392	2818396	.	-	.	ID=id3215;gbkey=RBS
NC_003888.3	RefSeq	gene	2818657	2819433	.	-	.	ID=gene2607;Dbxref=GeneID:1098034;Name=SCC88.11c;gbkey=Gene;gene=SCC88.11c;gene_biotype=protein_coding;gene_synonym=SCC88.11c;locus_tag=SCO2600
NC_003888.3	RefSeq	CDS	2818657	2819433	.	-	0	ID=cds2563;Parent=gene2607;Dbxref=Genbank:NP_626837.1,GeneID:1098034;Name=NP_626837.1;Note=SCC88.11c%2C hypothetical protein%2C len: 258 aa%3B similar to TR:P73260 (EMBL:D90905) Synechocystis sp. hypothetical 97.4 kD protein%2C 865 aa%3B fasta scores: opt: 290 z-score: 317.3 E(): 2.9e-10%3B 31.3%25 identity in 179 aa overlap;gbkey=CDS;gene=SCC88.11c;product=hypothetical protein;protein_id=NP_626837.1;transl_table=11
NC_003888.3	RefSeq	gene	2819482	2820558	.	-	.	ID=gene2608;Dbxref=GeneID:1098035;Name=SCC88.12c;gbkey=Gene;gene=SCC88.12c;gene_biotype=protein_coding;gene_synonym=SCC88.12c;locus_tag=SCO2601
NC_003888.3	RefSeq	CDS	2819482	2820558	.	-	0	ID=cds2564;Parent=gene2608;Dbxref=Genbank:NP_626838.1,GeneID:1098035;Name=NP_626838.1;Note=SCC88.12c%2C possible integral membrane protein%2C len: 358 aa. Contain possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC88.12c;product=hypothetical protein;protein_id=NP_626838.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2820022	2820153	.	-	.	ID=id3216;Dbxref=GeneID:1098035;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SCC88.12c
NC_003888.3	RefSeq	gene	2820608	2822731	.	-	.	ID=gene2609;Dbxref=GeneID:1098036;Name=SCC88.13c;gbkey=Gene;gene=SCC88.13c;gene_biotype=protein_coding;gene_synonym=SCC88.13c;locus_tag=SCO2602
NC_003888.3	RefSeq	CDS	2820608	2822731	.	-	0	ID=cds2565;Parent=gene2609;Dbxref=Genbank:NP_626839.1,GeneID:1098036;Name=NP_626839.1;Note=SCC88.13c%2C unknown%2C len: 707 aa;gbkey=CDS;gene=SCC88.13c;product=hypothetical protein;protein_id=NP_626839.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2822738	2822741	.	-	.	ID=id3217;gbkey=RBS
NC_003888.3	RefSeq	gene	2823656	2825212	.	+	.	ID=gene2610;Dbxref=GeneID:1098037;Name=SCC88.14;gbkey=Gene;gene=SCC88.14;gene_biotype=protein_coding;gene_synonym=SCC88.14;locus_tag=SCO2603
NC_003888.3	RefSeq	CDS	2823656	2825212	.	+	0	ID=cds2566;Parent=gene2610;Dbxref=Genbank:NP_626840.1,GeneID:1098037;Name=NP_626840.1;Note=SCC88.14%2C possible integrase%2C len: 518 aa%3B similar to TR:Q38184 (EMBL:X85213) Bacteriophage TP901-1 integrase%2C 485 aa%3B fasta scores: opt: 212 z-score: 243.5 E(): 3.8e-06%3B 24.2%25 identity in 417 aa overlap. Contains TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCC88.14;product=integrase;protein_id=NP_626840.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2823749	2823751	.	+	.	ID=id3218;Dbxref=GeneID:1098037;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCC88.14
NC_003888.3	RefSeq	gene	2825348	2826283	.	-	.	ID=gene2611;Dbxref=GeneID:1098038;Name=SCC88.15c;gbkey=Gene;gene=SCC88.15c;gene_biotype=protein_coding;gene_synonym=SCC88.15c;locus_tag=SCO2604
NC_003888.3	RefSeq	CDS	2825348	2826283	.	-	0	ID=cds2567;Parent=gene2611;Dbxref=Genbank:NP_626841.1,GeneID:1098038;Name=NP_626841.1;Note=SCC88.15c%2C possible hypothetical protein%2C len: 311 aa. Contains N-terminal region signal peptide sequence and TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCC88.15c;product=hypothetical protein;protein_id=NP_626841.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2826032	2826034	.	-	.	ID=id3219;Dbxref=GeneID:1098038;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCC88.15c
NC_003888.3	RefSeq	ribosome_entry_site	2826286	2826291	.	-	.	ID=id3220;gbkey=RBS
NC_003888.3	RefSeq	gene	2826447	2827148	.	+	.	ID=gene2612;Dbxref=GeneID:1098039;Name=SCC88.16;gbkey=Gene;gene=SCC88.16;gene_biotype=protein_coding;gene_synonym=SCC88.16;locus_tag=SCO2605
NC_003888.3	RefSeq	CDS	2826447	2827148	.	+	0	ID=cds2568;Parent=gene2612;Dbxref=Genbank:NP_626842.1,GeneID:1098039;Name=NP_626842.1;Note=SCC88.16%2C unknown%2C len: 233 aa;gbkey=CDS;gene=SCC88.16;product=hypothetical protein;protein_id=NP_626842.1;transl_table=11
NC_003888.3	RefSeq	gene	2827396	2829381	.	-	.	ID=gene2613;Dbxref=GeneID:1098040;Name=orfsyn;gbkey=Gene;gene=orfsyn;gene_biotype=protein_coding;gene_synonym=orfsyn,SCC88.17c;locus_tag=SCO2606
NC_003888.3	RefSeq	CDS	2827396	2829381	.	-	0	ID=cds2569;Parent=gene2613;Dbxref=Genbank:NP_626843.1,GeneID:1098040;Name=NP_626843.1;Note=SCC88.17c%2C orfsyn%2C hypothetical protein%2C len: 661 aa%3B N-terminal region identical to previously sequenced TR:O33624 (EMBL:Y14206) Streptomyces coelicolor ORFSYN (fragment) and similar to TR:P73260 (EMBL:D90905) Synechocystis sp. hypothetical 97.4 kD protein 865 aa%3B fasta scores: opt: 1055 z-score: 1198.6 E(): 0%3B 41.2%25 identity in 624 aa overlap. Contains match to Prosite entry PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature;gbkey=CDS;gene=orfsyn;product=hypothetical protein;protein_id=NP_626843.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2828518	2835939	.	-	.	ID=id3221;Note=previously sequenced fragment (EMBL:Y14206);gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	2828578	2828610	.	-	.	ID=id3222;Dbxref=GeneID:1098040;Note=PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature;gbkey=misc_feature;gene=orfsyn
NC_003888.3	RefSeq	gene	2829460	2830656	.	-	.	ID=gene2614;Dbxref=GeneID:1098041;Name=SCC88.18c;gbkey=Gene;gene=SCC88.18c;gene_biotype=protein_coding;gene_synonym=SCC88.18c,sfr;locus_tag=SCO2607
NC_003888.3	RefSeq	CDS	2829460	2830656	.	-	0	ID=cds2570;Parent=gene2614;Dbxref=Genbank:NP_626844.1,GeneID:1098041;Name=NP_626844.1;Note=SCC88.18c%2C sfr%2C Sfr protein%2C len: 372 aa%3B identical to previously sequenced TR:O33623 (EMBL:Y14206) Streptomyces coelicolor Sfr protein and similar to SW:SP5E_BACSU (EMBL:X51419) Bacillus subtilis stage V sporulation protein E%2C SpoVE%2C 366 aa%3B fasta scores: opt: 795 z-score: 897.2 E(): 0%3B 39.4%25 identity in 363 aa overlap. Contains Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein and match to Prosite entry PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC88.18c;product=Sfr protein;protein_id=NP_626844.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2829469	2830572	.	-	.	ID=id3223;Dbxref=GeneID:1098041;Note=Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein%2C score 344.50%2C E-value 1.1e-99;gbkey=misc_feature;gene=SCC88.18c
NC_003888.3	RefSeq	sequence_feature	2829529	2829603	.	-	.	ID=id3224;Dbxref=GeneID:1098041;Note=PS00428 Cell cycle proteins ftsW / rodA / spoVE signature;gbkey=misc_feature;gene=SCC88.18c
NC_003888.3	RefSeq	gene	2830653	2832962	.	-	.	ID=gene2615;Dbxref=GeneID:1098042;Name=pbp2;gbkey=Gene;gene=pbp2;gene_biotype=protein_coding;gene_synonym=pbp2,SCC88.19c;locus_tag=SCO2608
NC_003888.3	RefSeq	CDS	2830653	2832962	.	-	0	ID=cds2571;Parent=gene2615;Dbxref=Genbank:NP_626845.1,GeneID:1098042;Name=NP_626845.1;Note=SCC88.19c%2C pbp2%2C penicillin binding protein%2C len: 769 aa%3B almost identical to previously sequenced TR:O33622 (EMBL:Y14206) Streptomyces coelicolor Pbp protein and similar to SW:PBP2_ECOLI (EMBL:X04516) Escherichia coli penicillin-binding protein 2 (Pbp-2)%2C 633 aa%3B fasta scores: opt: 226 z-score: 236.5 E(): 9.3e-06%3B 27.9%25 identity in 692 aa overlap. Contains Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain;gbkey=CDS;gene=pbp2;product=penicillin binding protein;protein_id=NP_626845.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2830665	2830669	.	-	.	ID=id3225;Dbxref=GeneID:1098042;gbkey=RBS;gene=pbp2
NC_003888.3	RefSeq	sequence_feature	2830995	2832173	.	-	.	ID=id3226;Dbxref=GeneID:1098042;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 436.00%2C E-value 3.3e-127;gbkey=misc_feature;gene=pbp2
NC_003888.3	RefSeq	ribosome_entry_site	2832972	2832975	.	-	.	ID=id3227;gbkey=RBS
NC_003888.3	RefSeq	gene	2833015	2833686	.	-	.	ID=gene2616;Dbxref=GeneID:1098043;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;gene_synonym=mreD,SCC88.20c;locus_tag=SCO2609
NC_003888.3	RefSeq	CDS	2833015	2833686	.	-	0	ID=cds2572;Parent=gene2616;Dbxref=Genbank:NP_626846.1,GeneID:1098043;Name=NP_626846.1;Note=SCC88.20c%2C mreD%2C rod shape-determining protein%2C len: 223 aa%3B identical to previously sequenced TR:O33621 (EMBL:Y14206) Streptomyces coelicolor MreD protein%2C 223 aa and similar to TR:O83512 (EMBL:AE001226) Treponema pallidum rod shape-determining protein (MreD)%2C 168 aa%3B fasta scores: opt: 135 z-score: 162.4 E(): 0.13%3B 24.8%25 identity in 161 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=mreD;product=rod shape-determining protein;protein_id=NP_626846.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2833697	2833700	.	-	.	ID=id3228;gbkey=RBS
NC_003888.3	RefSeq	gene	2833700	2834725	.	-	.	ID=gene2617;Dbxref=GeneID:1098044;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;gene_synonym=mreC,SCC88.21c;locus_tag=SCO2610
NC_003888.3	RefSeq	CDS	2833700	2834725	.	-	0	ID=cds2573;Parent=gene2617;Dbxref=Genbank:NP_626847.1,GeneID:1098044;Name=NP_626847.1;Note=in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall;gbkey=CDS;gene=mreC;product=rod shape-determining protein MreC;protein_id=NP_626847.1;transl_table=11
NC_003888.3	RefSeq	gene	2834908	2835939	.	-	.	ID=gene2618;Dbxref=GeneID:1098045;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;gene_synonym=mreB,SCC88.22c;locus_tag=SCO2611
NC_003888.3	RefSeq	CDS	2834908	2835939	.	-	0	ID=cds2574;Parent=gene2618;Dbxref=Genbank:NP_626848.1,GeneID:1098045;Name=NP_626848.1;Note=functions in MreBCD complex in some organisms;gbkey=CDS;gene=mreB;product=rod shape-determining protein MreB;protein_id=NP_626848.1;transl_table=11
NC_003888.3	RefSeq	gene	2836247	2836660	.	-	.	ID=gene2619;Dbxref=GeneID:1098046;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;gene_synonym=SCC88.23c;locus_tag=SCO2612
NC_003888.3	RefSeq	CDS	2836247	2836660	.	-	0	ID=cds2575;Parent=gene2619;Dbxref=Genbank:NP_626849.1,GeneID:1098046;Name=NP_626849.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;gene=ndk;product=nucleoside diphosphate kinase;protein_id=NP_626849.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2836247	2836660	.	-	.	ID=id3229;Dbxref=GeneID:1098046;Note=previously sequenced region (EMBL:);gbkey=misc_feature;gene=ndk
NC_003888.3	RefSeq	sequence_feature	2836259	2836651	.	-	.	ID=id3230;Dbxref=GeneID:1098046;Note=Pfam match to entry PF00334 NDK%2C Nucleoside diphosphate kinases%2C score 194.30%2C E-value 1.9e-54;gbkey=misc_feature;gene=ndk
NC_003888.3	RefSeq	sequence_feature	2836295	2836321	.	-	.	ID=id3231;Dbxref=GeneID:1098046;Note=PS00469 Nucleoside diphosphate kinases active site;gbkey=misc_feature;gene=ndk
NC_003888.3	RefSeq	ribosome_entry_site	2836666	2836669	.	-	.	ID=id3232;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	2836785	2839736	.	-	.	ID=id3233;Note=previously sequenced fragment (EMBL:Y13070);gbkey=misc_feature
NC_003888.3	RefSeq	gene	2836785	2837141	.	-	.	ID=gene2620;Dbxref=GeneID:1098047;Name=SCC88.24c;gbkey=Gene;gene=SCC88.24c;gene_biotype=protein_coding;gene_synonym=SCC88.24c;locus_tag=SCO2613
NC_003888.3	RefSeq	CDS	2836785	2837141	.	-	0	ID=cds2576;Parent=gene2620;Dbxref=Genbank:NP_626850.1,GeneID:1098047;Name=NP_626850.1;Note=SCC88.24c%2C possible membrane protein%2C len: 117 aa%3B identical to previously sequenced TR:O06852 (EMBL:Y13070) Streptomyces coelicolor hypothetical 12.3 kD protein%2C 117 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC88.24c;product=hypothetical protein;protein_id=NP_626850.1;transl_table=11
NC_003888.3	RefSeq	gene	2837148	2838482	.	-	.	ID=gene2621;Dbxref=GeneID:1098048;Name=fpgS;gbkey=Gene;gene=fpgS;gene_biotype=protein_coding;gene_synonym=fpgS,SCC88.25c;locus_tag=SCO2614
NC_003888.3	RefSeq	CDS	2837148	2838482	.	-	0	ID=cds2577;Parent=gene2621;Dbxref=Genbank:NP_626851.1,GeneID:1098048;Name=NP_626851.1;Note=SCC88.25c%2C fpgS%2C folylpolyglutamate synthase%2C len: 444 aa%3B identical to previously sequenced TR:O08416 (EMBL:Y13070) Streptomyces coelicolor folylpolyglutamate synthase (EC 6.3.2.17)%2C 444 aa and similar to SW:FOLC_BACSU (EMBL:L04520) Bacillus subtilis folylpolyglutamate synthase (EC 6.3.2.17)%2C FolC%2C 430 aa%3B fasta scoreS: opt: 622 z-score: 688.7 E(): 6.1e-31%3B 32.0%25 identity in 438 aa overlap. Contains Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family and matches to Prosite entries PS00398 Site-specific recombinases signature 2 and PS01012 Folylpolyglutamate synthase signature 2;gbkey=CDS;gene=fpgS;product=folylpolyglutamate synthase;protein_id=NP_626851.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2837514	2838353	.	-	.	ID=id3234;Dbxref=GeneID:1098048;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C score 240.00%2C E-value 3.4e-68;gbkey=misc_feature;gene=fpgS
NC_003888.3	RefSeq	sequence_feature	2838009	2838056	.	-	.	ID=id3235;Dbxref=GeneID:1098048;Note=PS01012 Folylpolyglutamate synthase signature 2;gbkey=misc_feature;gene=fpgS
NC_003888.3	RefSeq	sequence_feature	2838396	2838434	.	-	.	ID=id3236;Dbxref=GeneID:1098048;Note=PS00398 Site-specific recombinases signature 2;gbkey=misc_feature;gene=fpgS
NC_003888.3	RefSeq	ribosome_entry_site	2838491	2838495	.	-	.	ID=id3237;gbkey=RBS
NC_003888.3	RefSeq	gene	2838957	2841581	.	-	.	ID=gene2622;Dbxref=GeneID:1098049;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;gene_synonym=SCC88.26c;locus_tag=SCO2615
NC_003888.3	RefSeq	CDS	2838957	2841581	.	-	0	ID=cds2578;Parent=gene2622;Dbxref=Genbank:NP_626852.1,GeneID:1098049;Name=NP_626852.1;Note=valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val)%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain;gbkey=CDS;gene=valS;product=valyl-tRNA synthetase;protein_id=NP_626852.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2839698	2841500	.	-	.	ID=id3238;Dbxref=GeneID:1098049;Note=Pfam match to entry PF00133 tRNA-synt_1%2C tRNA synthetases class I (I%2C L%2C M and V)%2C score 856.60%2C E-value 8.1e-254;gbkey=misc_feature;gene=valS
NC_003888.3	RefSeq	sequence_feature	2841378	2841413	.	-	.	ID=id3239;Dbxref=GeneID:1098049;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=valS
NC_003888.3	RefSeq	gene	2841719	2842726	.	+	.	ID=gene2623;Dbxref=GeneID:1098050;Name=SCC80.01;gbkey=Gene;gene=SCC80.01;gene_biotype=protein_coding;gene_synonym=SCC80.01,SCC88.27;locus_tag=SCO2616
NC_003888.3	RefSeq	CDS	2841719	2842726	.	+	0	ID=cds2579;Parent=gene2623;Dbxref=Genbank:NP_733578.1,GeneID:1098050;Name=NP_733578.1;Note=SCC80.01%2C unknown (fragment)%2C len: >142 aa~SCC88.27%2C possible membrane protein%2C len: >225 aa. Rich in proline and glycine. Contains possible hydrophobic membrane spanning region and the following repeats at the N-terminal region: 4x(QPGPYG) and 4x(PPYGQQ);gbkey=CDS;gene=SCC80.01;product=hypothetical protein;protein_id=NP_733578.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2841732	2841796	.	+	.	ID=id3240;Dbxref=GeneID:1098050;Note=4x(QPGPYG) repeat;gbkey=repeat_region;gene=SCC80.01
NC_003888.3	RefSeq	repeat_region	2841917	2841988	.	+	.	ID=id3241;Dbxref=GeneID:1098050;Note=4x(PPYGQQ) repeat;gbkey=repeat_region;gene=SCC80.01
NC_003888.3	RefSeq	stem_loop	2842741	2842778	.	+	.	ID=id3242;Note=possible stem loop. Score 54: 18/18 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2842798	2844084	.	-	.	ID=gene2624;Dbxref=GeneID:1098051;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;gene_synonym=SCC80.02c;locus_tag=SCO2617
NC_003888.3	RefSeq	CDS	2842798	2844084	.	-	0	ID=cds2580;Parent=gene2624;Dbxref=Genbank:NP_626853.1,GeneID:1098051;Name=NP_626853.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=NP_626853.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2843113	2843736	.	-	.	ID=id3243;Dbxref=GeneID:1098051;Note=Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA)%2C score 108.30%2C E-value 1.5e-28;gbkey=misc_feature;gene=clpX
NC_003888.3	RefSeq	sequence_feature	2843677	2845812	.	-	.	ID=id3244;Note=previously sequenced DNA fragment. EMBL:AF071885 Streptomyces coelicolor ATP-dependent Clp protease proteolytic subunit 1 (clpP1) and ATP-dependent Clp protease proteolytic subunit 2 (clpP2) genes%2C complete cds%3B and ATP-dependent Clp protease ATP-binding subunit Clpx (clpX) gene%2C partial cds.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	2843698	2843721	.	-	.	ID=id3245;Dbxref=GeneID:1098051;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=clpX
NC_003888.3	RefSeq	gene	2844276	2844986	.	-	.	ID=gene2625;Dbxref=GeneID:1098052;Name=clpP2;gbkey=Gene;gene=clpP2;gene_biotype=protein_coding;gene_synonym=clpP2,SCC80.03c;locus_tag=SCO2618
NC_003888.3	RefSeq	CDS	2844276	2844986	.	-	0	ID=cds2581;Parent=gene2625;Dbxref=Genbank:NP_626854.1,GeneID:1098052;Name=NP_626854.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;gene=clpP2;product=ATP-dependent Clp protease proteolytic subunit;protein_id=NP_626854.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2844306	2844878	.	-	.	ID=id3246;Dbxref=GeneID:1098052;Note=Pfam match to entry PF00574 CLP_protease%2C Clp protease%2C score 304.50%2C E-value 1.3e-87;gbkey=misc_feature;gene=clpP2
NC_003888.3	RefSeq	sequence_feature	2844582	2844617	.	-	.	ID=id3247;Dbxref=GeneID:1098052;Note=PS00381 Endopeptidase Clp serine active site;gbkey=misc_feature;gene=clpP2
NC_003888.3	RefSeq	ribosome_entry_site	2844992	2844997	.	-	.	ID=id3248;gbkey=RBS
NC_003888.3	RefSeq	gene	2845037	2845696	.	-	.	ID=gene2626;Dbxref=GeneID:1098053;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;gene_synonym=clpP1,SCC80.04c;locus_tag=SCO2619
NC_003888.3	RefSeq	CDS	2845037	2845696	.	-	0	ID=cds2582;Parent=gene2626;Dbxref=Genbank:NP_626855.1,GeneID:1098053;Name=NP_626855.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;gene=clpP;product=ATP-dependent Clp protease proteolytic subunit;protein_id=NP_626855.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2845076	2845591	.	-	.	ID=id3249;Dbxref=GeneID:1098053;Note=Pfam match to entry PF00574 CLP_protease%2C Clp protease%2C score 331.70%2C E-value 8.2e-96;gbkey=misc_feature;gene=clpP
NC_003888.3	RefSeq	gene	2846000	2847406	.	-	.	ID=gene2627;Dbxref=GeneID:1098054;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;gene_synonym=SCC80.05c;locus_tag=SCO2620
NC_003888.3	RefSeq	CDS	2846000	2847406	.	-	0	ID=cds2583;Parent=gene2627;Dbxref=Genbank:NP_626856.1,GeneID:1098054;Name=NP_626856.1;Note=Tig%3B RopA%3B peptidyl-prolyl cis/trans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer;gbkey=CDS;gene=tig;product=trigger factor;protein_id=NP_626856.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2847415	2847422	.	-	.	ID=id3250;gbkey=RBS
NC_003888.3	RefSeq	gene	2847576	2847652	.	-	.	ID=gene2628;Dbxref=GeneID:3240016;Name=SCOt16;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt16
NC_003888.3	RefSeq	tRNA	2847576	2847652	.	-	.	ID=rna22;Parent=gene2628;Dbxref=GeneID:3240016;Note=tRNA Pro anticodon TGG%2C Cove score 86.37;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	exon	2847576	2847652	.	-	.	ID=id3251;Parent=rna22;Dbxref=GeneID:3240016;Note=tRNA Pro anticodon TGG%2C Cove score 86.37;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	gene	2847816	2847889	.	+	.	ID=gene2629;Dbxref=GeneID:3240017;Name=SCOt17;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt17
NC_003888.3	RefSeq	tRNA	2847816	2847889	.	+	.	ID=rna23;Parent=gene2629;Dbxref=GeneID:3240017;Note=tRNA Gly anticodon TCC%2C Cove score 78.23;gbkey=tRNA;product=tRNA-Gly
NC_003888.3	RefSeq	exon	2847816	2847889	.	+	.	ID=id3252;Parent=rna23;Dbxref=GeneID:3240017;Note=tRNA Gly anticodon TCC%2C Cove score 78.23;gbkey=tRNA;product=tRNA-Gly
NC_003888.3	RefSeq	stem_loop	2847892	2847932	.	-	.	ID=id3253;Note=possible stem loop. Score 50: 18/19 (94%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2847983	2848177	.	-	.	ID=gene2630;Dbxref=GeneID:1098055;Name=SCC80.06c;gbkey=Gene;gene=SCC80.06c;gene_biotype=protein_coding;gene_synonym=SCC80.06c;locus_tag=SCO2621
NC_003888.3	RefSeq	CDS	2847983	2848177	.	-	0	ID=cds2584;Parent=gene2630;Dbxref=Genbank:NP_626857.1,GeneID:1098055;Name=NP_626857.1;Note=SCC80.06c%2C membarne protein%2C len: 64 aa%3B similar to TR:Q9RJX5 (EMBL:AL133210) Streptomyces coelicolor hypothetical 6.6 kDa protein SCG11A.26c%2C 64 aa%3B fasta scores: opt: 175 z-score: 234.0 E(): 1.6e-05%3B 46.0%25 identity in 63 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC80.06c;product=hypothetical protein;protein_id=NP_626857.1;transl_table=11
NC_003888.3	RefSeq	gene	2848812	2849981	.	+	.	ID=gene2631;Dbxref=GeneID:1098056;Name=SCC80.07;gbkey=Gene;gene=SCC80.07;gene_biotype=protein_coding;gene_synonym=SCC80.07;locus_tag=SCO2622
NC_003888.3	RefSeq	CDS	2848812	2849981	.	+	0	ID=cds2585;Parent=gene2631;Dbxref=Genbank:NP_626858.1,GeneID:1098056;Name=NP_626858.1;Note=SCC80.07%2C possible integral membrane protein%2C len: 389 aa%3B similar to TR:O31660 (EMBL:Z99111) Bacillus subtilis YkrP protein%2C 340 aa%3B fasta scores: opt: 590 z-score: 707.1 E(): 7.2e-32%3B 32.0%25 identity in 341 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC80.07;product=hypothetical protein;protein_id=NP_626858.1;transl_table=11
NC_003888.3	RefSeq	gene	2849992	2850486	.	-	.	ID=gene2632;Dbxref=GeneID:1098057;Name=SCC80.08c;gbkey=Gene;gene=SCC80.08c;gene_biotype=protein_coding;gene_synonym=SCC80.08c;locus_tag=SCO2623
NC_003888.3	RefSeq	CDS	2849992	2850486	.	-	0	ID=cds2586;Parent=gene2632;Dbxref=Genbank:NP_626859.1,GeneID:1098057;Name=NP_626859.1;Note=SCC80.08c%2C hypothetical protein%2C len: 164 aa%3B similar to N-terminal domain of SW:RELA_CORGL (EMBL:AF038651) Corynebacterium glutamicum GTP pyrophosphokinase (EC 2.7.6.5) RelA%2C 760 aa%3B fasta scores: opt: 162 z-score: 170.8 E(): 0.054%3B 33.6%25 identity in 149 aa overlap. Contains 3x conserved repeat: MPP;gbkey=CDS;gene=SCC80.08c;product=hypothetical protein;protein_id=NP_626859.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2850460	2850486	.	-	.	ID=id3254;Dbxref=GeneID:1098057;Note=3x conserved repeat translated in StC80.08c;gbkey=repeat_region;gene=SCC80.08c
NC_003888.3	RefSeq	gene	2850510	2851697	.	-	.	ID=gene2633;Dbxref=GeneID:1098058;Name=SCC80.09c;gbkey=Gene;gene=SCC80.09c;gene_biotype=protein_coding;gene_synonym=SCC80.09c;locus_tag=SCO2624
NC_003888.3	RefSeq	CDS	2850510	2851697	.	-	0	ID=cds2587;Parent=gene2633;Dbxref=Genbank:NP_626860.1,GeneID:1098058;Name=NP_626860.1;Note=SCC80.09c%2C possible integral membrane protein%2C len: 395 aa%3B similar to TR:Q9RL36 (EMBL:AL121596) Streptomyces coelicolor hypothetical 29.6 kDa protein SCF51A.29c%2C 284 aa%3B fasta scores: opt: 269 z-score: 309.0 E(): 1.1e-09%3B 31.0%25 identity in 258 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC80.09c;product=hypothetical protein;protein_id=NP_626860.1;transl_table=11
NC_003888.3	RefSeq	gene	2851911	2853152	.	+	.	ID=gene2634;Dbxref=GeneID:1098059;Name=SCC80.10;gbkey=Gene;gene=SCC80.10;gene_biotype=protein_coding;gene_synonym=SCC80.10;locus_tag=SCO2625
NC_003888.3	RefSeq	CDS	2851911	2853152	.	+	0	ID=cds2588;Parent=gene2634;Dbxref=Genbank:NP_626861.1,GeneID:1098059;Name=NP_626861.1;Note=SCC80.10%2C hypothetical protein%2C len: 413 aa%3B similar to TR:CAB94090 (EMBL:AL358692) Streptomyces coelicolor conserved hypothetical protein SCD66.23%2C 418 aa%3B fasta scores: opt: 698 z-score: 807.3 E(): 0%3B 35.8%25 identity in 419 aa overlap;gbkey=CDS;gene=SCC80.10;product=hypothetical protein;protein_id=NP_626861.1;transl_table=11
NC_003888.3	RefSeq	gene	2853163	2854005	.	-	.	ID=gene2635;Dbxref=GeneID:1098060;Name=SCC80.11c;gbkey=Gene;gene=SCC80.11c;gene_biotype=protein_coding;gene_synonym=SCC80.11c;locus_tag=SCO2626
NC_003888.3	RefSeq	CDS	2853163	2854005	.	-	0	ID=cds2589;Parent=gene2635;Dbxref=Genbank:NP_626862.1,GeneID:1098060;Name=NP_626862.1;Note=SCC80.11c%2C probable DNA repair hydrolase (fragment)%2C len: >306 aa%3B similar to SW:FPG_ECOLI (EMBL:M86305) Escherichia coli formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) MutM%2C 269 aa%3B fasta scores: opt: 347 z-score: 395.3 E(): 1.7e-14%3B 31.6%25 identity in 209 aa overlap. Contains Pfam match to entry PF01149 Fapy_DNA_glyco%2C Formamidopyrimidine-DNA glycosylase and match to Prosite entry;gbkey=CDS;gene=SCC80.11c;product=DNA repair hydrolase (fragment);protein_id=NP_626862.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2853172	2854002	.	-	.	ID=id3255;Dbxref=GeneID:1098060;Note=Pfam match to entry PF01149 Fapy_DNA_glyco%2C Formamidopyrimidine-DNA glycosylase%2C score 203.00%2C E-value 4.7e-57;gbkey=misc_feature;gene=SCC80.11c
NC_003888.3	RefSeq	gene	2854112	2854591	.	-	.	ID=gene2636;Dbxref=GeneID:1098061;Name=SC8E4.02c;gbkey=Gene;gene=SC8E4.02c;gene_biotype=protein_coding;gene_synonym=SC8E4.02c;locus_tag=SCO2627
NC_003888.3	RefSeq	CDS	2854112	2854591	.	-	0	ID=cds2590;Parent=gene2636;Dbxref=Genbank:NP_626863.1,GeneID:1098061;Name=NP_626863.1;Note=catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate%3B enzyme from E. coli shows allose 6-phosphate isomerase activity;gbkey=CDS;gene=SC8E4.02c;product=ribose-5-phosphate isomerase B;protein_id=NP_626863.1;transl_table=11
NC_003888.3	RefSeq	gene	2854806	2856074	.	+	.	ID=gene2637;Dbxref=GeneID:1098062;Name=SC8E4.03;gbkey=Gene;gene=SC8E4.03;gene_biotype=protein_coding;gene_synonym=SC8E4.03;locus_tag=SCO2628
NC_003888.3	RefSeq	CDS	2854806	2856074	.	+	0	ID=cds2591;Parent=gene2637;Dbxref=Genbank:NP_626864.1,GeneID:1098062;Name=NP_626864.1;Note=SC8E4.03%2C probable amino acid permease%2C len: 422 aa%3B similar to SW:GABP_BACSU (EMBL:U31756) Bacillus subtilis GABA permease (4-amino butyrate transport carrier) GabP%2C 469 aa%3B fasta scores: opt: 1479 z-score: 1502.0 E(): 0%3B 58.5%25 identity in 366 aa overlap%2C to SW:GABP_ECOLI (EMBL:M88334) Escherichia coli GABA permease (4-amino butyrate transport carrier) GabP%2C 466 aa%3B fasta scores: opt: 1334 z-score: 1355.6 E(): 0%3B 52.4%25 identity in 372 aa overlap and to S. ceolicolor SC8E4A.01 517 aa%3B fasta scores: opt: 1367 z-score: 1291.7 E(): 0%3B 54.4%25 identity in 371 aa overlap. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and match to Prosite entry PS00218 Amino acid permeases signature. Contains also several possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8E4.03;product=amino acid permease;protein_id=NP_626864.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2854875	2856035	.	+	.	ID=id3256;Dbxref=GeneID:1098062;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 463.00%2C E-value 2.5e-135;gbkey=misc_feature;gene=SC8E4.03
NC_003888.3	RefSeq	sequence_feature	2854974	2855066	.	+	.	ID=id3257;Dbxref=GeneID:1098062;Note=PS00218 Amino acid permeases signature;gbkey=misc_feature;gene=SC8E4.03
NC_003888.3	RefSeq	gene	2856104	2856250	.	+	.	ID=gene2638;Dbxref=GeneID:1098063;Name=SC8E4.04;gbkey=Gene;gene=SC8E4.04;gene_biotype=protein_coding;gene_synonym=SC8E4.04;locus_tag=SCO2629
NC_003888.3	RefSeq	CDS	2856104	2856250	.	+	0	ID=cds2592;Parent=gene2638;Dbxref=Genbank:NP_626865.1,GeneID:1098063;Name=NP_626865.1;Note=SC8E4.04%2C membrane protein%2C len: 48 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC8E4.04;product=hypothetical protein;protein_id=NP_626865.1;transl_table=11
NC_003888.3	RefSeq	gene	2856329	2857072	.	-	.	ID=gene2639;Dbxref=GeneID:1098064;Name=SC8E4.05c;gbkey=Gene;gene=SC8E4.05c;gene_biotype=protein_coding;gene_synonym=SC8E4.05c;locus_tag=SCO2630
NC_003888.3	RefSeq	CDS	2856329	2857072	.	-	0	ID=cds2593;Parent=gene2639;Dbxref=Genbank:NP_626866.1,GeneID:1098064;Name=NP_626866.1;Note=SC8E4.05c%2C possible biotin synthase%2C len: 246 aa%3B similar to TR:AAF12013 (EMBL:AE002076) Deinococcus radiodurans biotin synthase DR2470%2C 229 aa%3B fasta scores: opt: 293 z-score: 315.9 E(): 3.5e-10%3B 33.0%25 identity in 209 aa overlap and to SW:BIOY_BACSH (EMBL:M29292) Bacillus sphaericus BioY protein%2C 196 aa%3B fasta scores: opt: 275 z-score: 299.1 E(): 3e-09%3B 35.5%25 identity in 155 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8E4.05c;product=biotin synthase;protein_id=NP_626866.1;transl_table=11
NC_003888.3	RefSeq	gene	2857300	2858685	.	+	.	ID=gene2640;Dbxref=GeneID:1098065;Name=SC8E4A.01;gbkey=Gene;gene=SC8E4A.01;gene_biotype=protein_coding;gene_synonym=SC8E4A.01;locus_tag=SCO2631
NC_003888.3	RefSeq	CDS	2857300	2858685	.	+	0	ID=cds2594;Parent=gene2640;Dbxref=Genbank:NP_626867.1,GeneID:1098065;Name=NP_626867.1;Note=SC8E4A.01%2C probable amino acid permease%2C len: 461 aa%3B similar to C-terminal domain of SW:GABP_BACSU (EMBL:U31756) Bacillus subtilis GABA permease (4-amino butyrate transport carrier) GabP%2C 469 aa%3B fasta scores: opt: 1330 z-score: 1240.9 E(): 0%3B 42.9%25 identity in 448 aa overlap and to SW:GABP_ECOLI (EMBL:M88334) Escherichia coli GABA permease (4-amino butyrate transport carrier) GabP%2C 466 aa%3B fasta scores: opt: 1255 z-score: 1381.7 E(): 0%3B 41.9%25 identity in 451 aa overlap. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and match to Prosite entry PS00218 Amino acid permeases signature. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8E4A.01;product=amino acid permease;protein_id=NP_626867.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2857351	2858667	.	+	.	ID=id3258;Dbxref=GeneID:1098065;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 504.20%2C E-value 9.8e-148;gbkey=misc_feature;gene=SC8E4A.01
NC_003888.3	RefSeq	sequence_feature	2857450	2857542	.	+	.	ID=id3259;Dbxref=GeneID:1098065;Note=PS00218 Amino acid permeases signature;gbkey=misc_feature;gene=SC8E4A.01
NC_003888.3	RefSeq	stem_loop	2858682	2858871	.	-	.	ID=id3260;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2858918	2859937	.	+	.	ID=gene2641;Dbxref=GeneID:1098066;Name=SC8E4A.02;gbkey=Gene;gene=SC8E4A.02;gene_biotype=protein_coding;gene_synonym=SC8E4A.02;locus_tag=SCO2632
NC_003888.3	RefSeq	CDS	2858918	2859937	.	+	0	ID=cds2595;Parent=gene2641;Dbxref=Genbank:NP_626868.1,GeneID:1098066;Name=NP_626868.1;Note=SC8E4A.02%2C probable transposase%2C len: 338 aa%3B identical to previously sequenced TR:Q9X467 (EMBL:AF099014) Streptomyces coelicolor transposase tnpA%2C 338 aa and to TR:CAB55730 (EMBL:AL117387) Streptomyces coelicolor transposase SCF41.27%2C 318 aa%3B fasta scores: opt: 2217 z-score: 2582.6 E(): 0%3B 99.7%25 identity in 318 aa overlap;gbkey=CDS;gene=SC8E4A.02;product=transposase;protein_id=NP_626868.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2858918	2859937	.	+	.	ID=id3261;Dbxref=GeneID:1098066;Note=previously sequenced fragment EMBL:AF099014;gbkey=misc_feature;gene=SC8E4A.02
NC_003888.3	RefSeq	ribosome_entry_site	2860075	2860079	.	+	.	ID=id3262;gbkey=RBS
NC_003888.3	RefSeq	gene	2860089	2860730	.	+	.	ID=gene2642;Dbxref=GeneID:1098067;Name=SC8E4A.03;gbkey=Gene;gene=SC8E4A.03;gene_biotype=protein_coding;gene_synonym=SC8E4A.03,sodF;locus_tag=SCO2633
NC_003888.3	RefSeq	CDS	2860089	2860730	.	+	0	ID=cds2596;Parent=gene2642;Dbxref=Genbank:NP_626869.1,GeneID:1098067;Name=NP_626869.1;Note=SC8E4A.03%2C sodF%2C superoxide dismutase [Fe-Zn] (EC 1.15.1.1)%2C len: 213 aa%3B identical to previously sequenced SW:SODF_STRCO (EMBL:AF012087) Streptomyces coelicolor superoxide dismutase [Fe-Zn] (EC 1.15.1.1) SodF and highly similar to SW:SODM_PROFR (PIR:S41106) Propionibacterium freudenreichii shermanii superoxide dismutase [Mn-Fe] (EC 1.15.1.1) SodA%2C 201 aa%3B fasta scores: opt: 792 z-score: 939.3 E(): 0%3B 57.9%25 identity in 202 aa overlap. Contains Pfam match to entry PF00081 sodfe%2C Iron/manganese superoxide dismutases (SODM) and match to Prosite entry PS00088 Manganese and iron superoxide dismutases signature;gbkey=CDS;gene=SC8E4A.03;product=superoxide dismutase;protein_id=NP_626869.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2860089	2860730	.	+	.	ID=id3263;Dbxref=GeneID:1098067;Note=previously sequenced fragment EMBL:AF012087;gbkey=misc_feature;gene=SC8E4A.03
NC_003888.3	RefSeq	sequence_feature	2860095	2860700	.	+	.	ID=id3264;Dbxref=GeneID:1098067;Note=Pfam match to entry PF00081 sodfe%2C Iron/manganese superoxide dismutases (SODM)%2C score 357.80%2C E-value 1.1e-103;gbkey=misc_feature;gene=SC8E4A.03
NC_003888.3	RefSeq	sequence_feature	2860581	2860604	.	+	.	ID=id3265;Dbxref=GeneID:1098067;Note=PS00088 Manganese and iron superoxide dismutases signature;gbkey=misc_feature;gene=SC8E4A.03
NC_003888.3	RefSeq	gene	2860846	2861496	.	-	.	ID=gene2643;Dbxref=GeneID:1098068;Name=SC8E4A.04c;gbkey=Gene;gene=SC8E4A.04c;gene_biotype=protein_coding;gene_synonym=SC8E4A.04c;locus_tag=SCO2634
NC_003888.3	RefSeq	CDS	2860846	2861496	.	-	0	ID=cds2597;Parent=gene2643;Dbxref=Genbank:NP_626870.1,GeneID:1098068;Name=NP_626870.1;Note=SC8E4A.04c%2C hypothetical protein%2C len: 216 aa%3B similar to various hypothetical proteins%2C e.g. TR:O53193 (EMBL:AL021246) Mycobacterium tuberculosis hypothetical 23.0 kD protein MTV008.22c%2C 207 aa%3B fasta scores: opt: 789 z-score: 898.4 E(): 0%3B 54.9%25 identity in 213 aa overlap;gbkey=CDS;gene=SC8E4A.04c;product=hypothetical protein;protein_id=NP_626870.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2861699	2861702	.	+	.	ID=id3266;gbkey=RBS
NC_003888.3	RefSeq	gene	2861702	2864203	.	+	.	ID=gene2644;Dbxref=GeneID:1098069;Name=SC8E4A.05;gbkey=Gene;gene=SC8E4A.05;gene_biotype=protein_coding;gene_synonym=SC8E4A.05;locus_tag=SCO2635
NC_003888.3	RefSeq	CDS	2861702	2864203	.	+	0	ID=cds2598;Parent=gene2644;Dbxref=Genbank:NP_626871.1,GeneID:1098069;Name=NP_626871.1;Note=SC8E4A.05%2C probable aminopeptidase%2C len: 833 aa%3B similar to SW:AMPN_STRLI (EMBL:L23172) Streptomyces lividans aminopeptidase N (EC 3.4.11.2) PepN%2C 857 aa%3B fasta scores: opt: 3002 z-score: 3413.5 E(): 0%3B 56.5%25 identity in 832 aa overlap%2C to TR:O53194 (EMBL:AL021246) Mycobacterium tuberculosis aminopeptidase MTV008.23%2C 861 aa%3B fasta scores: opt: 2215 z-score: 2517.8 E(): 0%3B 50.8%25 identity in 837 aa overlap and to S. coelicolor St8E4A.13%2C pepN%2C 857 aa%3B fasta scores: opt: 2998 z-score: 2999.1 E(): 0%3B 55.8%25 identity in 842 aa overlap. Contains Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1 and match to Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=CDS;gene=SC8E4A.05;product=aminopeptidase;protein_id=NP_626871.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2861750	2862817	.	+	.	ID=id3267;Dbxref=GeneID:1098069;Note=Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1%2C score 85.50%2C E-value 1.1e-21;gbkey=misc_feature;gene=SC8E4A.05
NC_003888.3	RefSeq	sequence_feature	2862539	2862568	.	+	.	ID=id3268;Dbxref=GeneID:1098069;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC8E4A.05
NC_003888.3	RefSeq	gene	2864407	2865597	.	+	.	ID=gene2645;Dbxref=GeneID:1098070;Name=SC8E4A.06;gbkey=Gene;gene=SC8E4A.06;gene_biotype=protein_coding;gene_synonym=SC8E4A.06;locus_tag=SCO2636
NC_003888.3	RefSeq	CDS	2864407	2865597	.	+	0	ID=cds2599;Parent=gene2645;Dbxref=Genbank:NP_626872.1,GeneID:1098070;Name=NP_626872.1;Note=SC8E4A.06%2C unknown%2C len: 396 aa;gbkey=CDS;gene=SC8E4A.06;product=hypothetical protein;protein_id=NP_626872.1;transl_table=11
NC_003888.3	RefSeq	gene	2865913	2869209	.	+	.	ID=gene2646;Dbxref=GeneID:1098071;Name=SC8E4A.07;gbkey=Gene;gene=SC8E4A.07;gene_biotype=protein_coding;gene_synonym=SC8E4A.07;locus_tag=SCO2637
NC_003888.3	RefSeq	CDS	2865913	2869209	.	+	0	ID=cds2600;Parent=gene2646;Dbxref=Genbank:NP_626873.1,GeneID:1098071;Name=NP_626873.1;Note=SC8E4A.07%2C possible serine protease (hypothetical protein)%2C len: 1098 aa%3B similar to TR:O93635 (EMBL:AF015225) Thermococcus stetteri stetterlysin (fragment) PlsT%2C 891 aa%3B fasta scores: opt: 564 z-score: 570.6 E(): 2.2e-24%3B 26.0%25 identity in 918 aa overlap and to SW:SUBV_BACSU (EMBL:M76590) Bacillus subtilis minor extracellular protease VPR precursor (EC 3.4.21.-)%2C 806 aa%3B fasta scores: opt: 251 z-score: 254.0 E(): 9.7e-07%3B 23.8%25 identity in 820 aa overlap. Contains Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site PS00137 Serine proteases%2C subtilase family%2C histidine active site PS00138 Serine proteases%2C subtilase family%2C serine active site. Contains also possible N-terminal region peptide signal sequence;gbkey=CDS;gene=SC8E4A.07;product=serine protease;protein_id=NP_626873.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2866513	2867787	.	+	.	ID=id3269;Dbxref=GeneID:1098071;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 43.60%2C E-value 4.1e-11;gbkey=misc_feature;gene=SC8E4A.07
NC_003888.3	RefSeq	sequence_feature	2866534	2866569	.	+	.	ID=id3270;Dbxref=GeneID:1098071;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SC8E4A.07
NC_003888.3	RefSeq	sequence_feature	2867071	2867103	.	+	.	ID=id3271;Dbxref=GeneID:1098071;Note=PS00137 Serine proteases%2C subtilase family%2C histidine active site;gbkey=misc_feature;gene=SC8E4A.07
NC_003888.3	RefSeq	sequence_feature	2867653	2867685	.	+	.	ID=id3272;Dbxref=GeneID:1098071;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site;gbkey=misc_feature;gene=SC8E4A.07
NC_003888.3	RefSeq	gene	2869281	2870030	.	-	.	ID=gene2647;Dbxref=GeneID:1098072;Name=SC8E4A.08c;gbkey=Gene;gene=SC8E4A.08c;gene_biotype=protein_coding;gene_synonym=SC8E4A.08c;locus_tag=SCO2638
NC_003888.3	RefSeq	CDS	2869281	2870030	.	-	0	ID=cds2601;Parent=gene2647;Dbxref=Genbank:NP_626874.1,GeneID:1098072;Name=NP_626874.1;Note=SC8E4A.08c%2C membrane protein%2C len: 249 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8E4A.08c;product=hypothetical protein;protein_id=NP_626874.1;transl_table=11
NC_003888.3	RefSeq	gene	2870032	2870658	.	-	.	ID=gene2648;Dbxref=GeneID:1098073;Name=SC8E4A.09c;gbkey=Gene;gene=SC8E4A.09c;gene_biotype=protein_coding;gene_synonym=SC8E4A.09c;locus_tag=SCO2639
NC_003888.3	RefSeq	CDS	2870032	2870658	.	-	0	ID=cds2602;Parent=gene2648;Dbxref=Genbank:NP_626875.1,GeneID:1098073;Name=NP_626875.1;Note=SC8E4A.09c%2C possible RNA polymerase sigma factor%2C len: 208 aa%3B similar to TR:O53798 (EMBL:AL021958) Mycobacterium tuberculosis RNA polymerase sigma factor SigJ%2C 177 aa%3B fasta scores: opt: 221 z-score: 269.6 E(): 1.3e-07%3B 34.9%25 identity in 146 aa overlap and to SW:SIGV_BACSU (EMBL:U93874) Bacillus subtilis RNA polymerase sigma factor SigV%2C 166 aa%3B fasta scores: opt: 177 z-score: 218.8 E(): 8.9e-05%3B 28.2%25 identity in 142 aa overlap. Contains possible helix-turn-helix motif at residues 171..192 (+2.79 SD);gbkey=CDS;gene=SC8E4A.09c;product=RNA polymerase sigma factor;protein_id=NP_626875.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2870040	2870043	.	-	.	ID=id3273;Dbxref=GeneID:1098073;gbkey=RBS;gene=SC8E4A.09c
NC_003888.3	RefSeq	ribosome_entry_site	2870826	2870830	.	+	.	ID=id3274;gbkey=RBS
NC_003888.3	RefSeq	gene	2870836	2871858	.	+	.	ID=gene2649;Dbxref=GeneID:1098074;Name=asd1;gbkey=Gene;gene=asd1;gene_biotype=protein_coding;gene_synonym=asd1,SC8E4A.10;locus_tag=SCO2640
NC_003888.3	RefSeq	CDS	2870836	2871858	.	+	0	ID=cds2603;Parent=gene2649;Dbxref=Genbank:NP_626876.1,GeneID:1098074;Name=NP_626876.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;gene=asd1;product=aspartate-semialdehyde dehydrogenase;protein_id=NP_626876.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2871541	2871585	.	+	.	ID=id3275;Dbxref=GeneID:1098074;Note=PS01103 Aspartate-semialdehyde dehydrogenase signature;gbkey=misc_feature;gene=asd1
NC_003888.3	RefSeq	gene	2871981	2873168	.	+	.	ID=gene2650;Dbxref=GeneID:1098075;Name=SC8E4A.11;gbkey=Gene;gene=SC8E4A.11;gene_biotype=protein_coding;gene_synonym=SC8E4A.11;locus_tag=SCO2641
NC_003888.3	RefSeq	CDS	2871981	2873168	.	+	0	ID=cds2604;Parent=gene2650;Dbxref=Genbank:NP_626877.1,GeneID:1098075;Name=NP_626877.1;Note=SC8E4A.11%2C possible resistance protein%2C len: 395 aa%3B similar to TR:Q9ZBZ1 (EMBL:AL034355) Streptomyces coelicolor hypothetical 51.0 kD protein SCD78.06%2C 482 aa%3B fasta scores: opt: 715 z-score: 690.5 E(): 4.7e-31%3B 38.0%25 identity in 403 aa overlap and to SW:TERD_ALCSP (EMBL:M20238) Alcaligenes sp. tellurium resistance protein TerD%2C 192 aa%3B fasta scores: opt: 392 z-score: 388.1 E(): 3.3e-14%3B 40.2%25 identity in 189 aa overlap;gbkey=CDS;gene=SC8E4A.11;product=resistance protein;protein_id=NP_626877.1;transl_table=11
NC_003888.3	RefSeq	gene	2873181	2873657	.	-	.	ID=gene2651;Dbxref=GeneID:1098076;Name=SC8E4A.12c;gbkey=Gene;gene=SC8E4A.12c;gene_biotype=protein_coding;gene_synonym=SC8E4A.12c;locus_tag=SCO2642
NC_003888.3	RefSeq	CDS	2873181	2873657	.	-	0	ID=cds2605;Parent=gene2651;Dbxref=Genbank:NP_626878.1,GeneID:1098076;Name=NP_626878.1;Note=SC8E4A.12c%2C unknown%2C len: 158 aa;gbkey=CDS;gene=SC8E4A.12c;product=hypothetical protein;protein_id=NP_626878.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2873756	2873761	.	+	.	ID=id3276;gbkey=RBS
NC_003888.3	RefSeq	gene	2873770	2876343	.	+	.	ID=gene2652;Dbxref=GeneID:1098077;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;gene_synonym=pepN,SC8E4A.13;locus_tag=SCO2643
NC_003888.3	RefSeq	CDS	2873770	2876343	.	+	0	ID=cds2606;Parent=gene2652;Dbxref=Genbank:NP_626879.1,GeneID:1098077;Name=NP_626879.1;Note=SC8E4A.13%2C pepN%2C aminopeptidase N%2C len: 857 aa%3B identical to SW:AMPN_STRLI (EMBL:L23172) Streptomyces lividans aminopeptidase N (EC 3.4.11.2) PepN%2C 857 aa and similar to SW:AMPN_LACLA (EMBL:D38040) Lactococcus lactis aminopeptidase N (EC 3.4.11.2) PepN%2C 848 aa%3B fasta scores: opt: 738 z-score: 846.7 E(): 0%3B 33.4%25 identity in 440 aa overlap and to S. coelicolor SC8E4A.05%2C 833 aa%3B fasta scores: opt: 2998 z-score: 2943.4 E(): 0%3B 55.8%25 identity in 842 aa overlap. Contains Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1 and match ot Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=CDS;gene=pepN;product=aminopeptidase N;protein_id=NP_626879.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2873854	2874936	.	+	.	ID=id3277;Dbxref=GeneID:1098077;Note=Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1%2C score 159.60%2C E-value 5.4e-44;gbkey=misc_feature;gene=pepN
NC_003888.3	RefSeq	sequence_feature	2874652	2874681	.	+	.	ID=id3278;Dbxref=GeneID:1098077;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=pepN
NC_003888.3	RefSeq	gene	2876450	2877352	.	-	.	ID=gene2653;Dbxref=GeneID:1098078;Name=SC8E4A.14c;gbkey=Gene;gene=SC8E4A.14c;gene_biotype=protein_coding;gene_synonym=SC8E4A.14c;locus_tag=SCO2644
NC_003888.3	RefSeq	CDS	2876450	2877352	.	-	0	ID=cds2607;Parent=gene2653;Dbxref=Genbank:NP_626880.1,GeneID:1098078;Name=NP_626880.1;Note=SC8E4A.14c%2C probable lysR-family transcriptional regulator%2C len: 300 aa%3B similar to TR:CAB62680 (EMBL:AL133422) Streptomyces coelicolor lysR-family transcriptional regulatory protein SCM1.22c%2C 301 aa%3B fasta scores: opt: 714 z-score: 790.0 E(): 0%3B 43.8%25 identity in 299 aa overlap and to TR:GLTC_BACSU (EMBL:M28509) Bacillus subtilis transcriptional regulatory protein GltC%2C 300 aa%3B fasta scores: opt: 376 z-score: 420.6 E(): 5.1e-16%3B 27.1%25 identity in 288 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein and possible helix-turn-helix motif at residues 19..40 (+4.89 SD);gbkey=CDS;gene=SC8E4A.14c;product=LysR family transcriptional regulator;protein_id=NP_626880.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2876909	2877337	.	-	.	ID=id3279;Dbxref=GeneID:1098078;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein;gbkey=misc_feature;gene=SC8E4A.14c
NC_003888.3	RefSeq	gene	2877382	2878338	.	-	.	ID=gene2654;Dbxref=GeneID:1098079;Name=SC8E4A.15c;gbkey=Gene;gene=SC8E4A.15c;gene_biotype=protein_coding;gene_synonym=SC8E4A.15c;locus_tag=SCO2645
NC_003888.3	RefSeq	CDS	2877382	2878338	.	-	0	ID=cds2608;Parent=gene2654;Dbxref=Genbank:NP_626881.1,GeneID:1098079;Name=NP_626881.1;Note=SC8E4A.15c%2C possible integral membrane protein%2C len: 318 aa%3B similar to various hypothetical proteins%2C e.g. TR:O68125 (EMBL:AF010496) Rhodobacter capsulatus hypothetical 32.2 kD protein%2C 296 aa%3B fasta scores: opt: 495 z-score: 560.3 E(): 8.4e-24%3B 36.0%25 identity in 292 aa overlap and to TR:AAF10091 (EMBL:AE001910) Deinococcus radiodurans conserved hypothetical protein DR0512%2C 301 aa%3B fasta scores: opt: 351 z-score: 399.7 E(): 7.5e-15%3B 30.0%25 identity in 303 aa overlap. Contains two Pfam matches to entry PF00892 DUF6%2C Integral membrane protein and various possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8E4A.15c;product=hypothetical protein;protein_id=NP_626881.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2877385	2877777	.	-	.	ID=id3280;Dbxref=GeneID:1098079;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 40.20%2C E-value 4.6e-08;gbkey=misc_feature;gene=SC8E4A.15c
NC_003888.3	RefSeq	sequence_feature	2877796	2878203	.	-	.	ID=id3281;Dbxref=GeneID:1098079;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 15.00%2C E-value 0.068;gbkey=misc_feature;gene=SC8E4A.15c
NC_003888.3	RefSeq	gene	2878372	2879334	.	-	.	ID=gene2655;Dbxref=GeneID:1098080;Name=SC8E4A.16c;gbkey=Gene;gene=SC8E4A.16c;gene_biotype=protein_coding;gene_synonym=SC8E4A.16c;locus_tag=SCO2646
NC_003888.3	RefSeq	CDS	2878372	2879334	.	-	0	ID=cds2609;Parent=gene2655;Dbxref=Genbank:NP_626882.1,GeneID:1098080;Name=NP_626882.1;Note=SC8E4A.16c%2C possible integral membrane protein%2C len: 320 aa%3B similar to SW:PECM_ERWCH (EMBL:X74409) Erwinia chrysanthemi PecM protein%2C 297 aa%3B fasta scores: opt: 781 z-score: 802.2 E(): 0%3B 43.9%25 identity in 278 aa overlap and to TR:AAF10091 (EMBL:AE001910) Deinococcus radiodurans conserved hypothetical protein DR0512%2C 301 aa%3B fasta scores: opt: 310 z-score: 324.9 E(): 1.1e-10%3B 29.0%25 identity in 286 aa overlap%3B fasta scores: opt: 748 z-score: 768.7 E(): 0%3B 46.5%25 identity in 284 aa overlap. Contains tow matches to Pfam entry PF00892 DUF6%2C Integral membrane protein and various possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8E4A.16c;product=hypothetical protein;protein_id=NP_626882.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2878456	2878866	.	-	.	ID=id3282;Dbxref=GeneID:1098080;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 91.30%2C E-value 2e-23;gbkey=misc_feature;gene=SC8E4A.16c
NC_003888.3	RefSeq	sequence_feature	2878897	2879286	.	-	.	ID=id3283;Dbxref=GeneID:1098080;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 18.20%2C E-value 0.045;gbkey=misc_feature;gene=SC8E4A.16c
NC_003888.3	RefSeq	ribosome_entry_site	2879343	2879347	.	-	.	ID=id3284;gbkey=RBS
NC_003888.3	RefSeq	gene	2879447	2879965	.	+	.	ID=gene2656;Dbxref=GeneID:1098081;Name=SC8E4A.17;gbkey=Gene;gene=SC8E4A.17;gene_biotype=protein_coding;gene_synonym=SC8E4A.17;locus_tag=SCO2647
NC_003888.3	RefSeq	CDS	2879447	2879965	.	+	0	ID=cds2610;Parent=gene2656;Dbxref=Genbank:NP_626883.1,GeneID:1098081;Name=NP_626883.1;Note=SC8E4A.17%2C probable MarR-family regulatory protein%2C len: 172 aa%3B similar to SW:PECS_ERWCH (EMBL:X74409) Erwinia chrysanthemi regulatory protein PecS%2C 166 aa%3B fasta scores: opt: 372 z-score: 442.3 E(): 3.2e-17%3B 39.6%25 identity in 149 aa overlap and to SW:MARR_SALTY (EMBL:U54468) Salmonella typhimurium multiple antibiotic resistance protein MarR%2C 144 aa%3B fasta scores: opt: 181 z-score: 223.4 E(): 5e-0%3B 28.6%25 identity in 133 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SC8E4A.17;product=MarR family regulatory protein;protein_id=NP_626883.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2879624	2879944	.	+	.	ID=id3285;Dbxref=GeneID:1098081;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 73.30%2C E-value 5.1e-18;gbkey=misc_feature;gene=SC8E4A.17
NC_003888.3	RefSeq	gene	2880082	2880369	.	-	.	ID=gene2657;Dbxref=GeneID:1098082;Name=SC8E4A.18c;gbkey=Gene;gene=SC8E4A.18c;gene_biotype=protein_coding;gene_synonym=SC8E4A.18c;locus_tag=SCO2648
NC_003888.3	RefSeq	CDS	2880082	2880369	.	-	0	ID=cds2611;Parent=gene2657;Dbxref=Genbank:NP_626884.1,GeneID:1098082;Name=NP_626884.1;Note=SC8E4A.18c%2C possible membrane protein%2C len: 95 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8E4A.18c;product=hypothetical protein;protein_id=NP_626884.1;transl_table=11
NC_003888.3	RefSeq	gene	2880455	2882590	.	-	.	ID=gene2658;Dbxref=GeneID:1098083;Name=SC8E4A.19c;gbkey=Gene;gene=SC8E4A.19c;gene_biotype=protein_coding;gene_synonym=SC8E4A.19c;locus_tag=SCO2649
NC_003888.3	RefSeq	CDS	2880455	2882590	.	-	0	ID=cds2612;Parent=gene2658;Dbxref=Genbank:NP_626885.1,GeneID:1098083;Name=NP_626885.1;Note=SC8E4A.19c%2C probable 4-alpha-glucanotransferase%2C len: 711 aa%3B similar to SW:MALQ_MYCTU (EMBL:AL022021) Mycobacterium tuberculosis 4-alpha-glucanotransferase (EC 2.4.1.25) MalQ%2C 724 aa%3B fasta scores: opt: 2038 z-score: 2288.0 E(): 0%3B 47.9%25 identity in 727 aa overlap and to SW:MALQ_ECOLI (EMBL:M32793) Escherichia coli 4-alpha-glucanotransferase (EC 2.4.1.25) MalQ%2C 694 aa%3B fasta scores: opt: 979 z-score: 1098.2 E(): 0%3B 33.3%25 identity in 654 aa overlap;gbkey=CDS;gene=SC8E4A.19c;product=4-alpha-glucanotransferase;protein_id=NP_626885.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2882597	2882601	.	-	.	ID=id3286;gbkey=RBS
NC_003888.3	RefSeq	gene	2882600	2882911	.	-	.	ID=gene2659;Dbxref=GeneID:1098084;Name=SC8E4A.20c;gbkey=Gene;gene=SC8E4A.20c;gene_biotype=protein_coding;gene_synonym=SC8E4A.20c;locus_tag=SCO2650
NC_003888.3	RefSeq	CDS	2882600	2882911	.	-	0	ID=cds2613;Parent=gene2659;Dbxref=Genbank:NP_626886.1,GeneID:1098084;Name=NP_626886.1;Note=SC8E4A.20c%2C hypothetical protein%2C len: 103 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8E4A.20c;product=hypothetical protein;protein_id=NP_626886.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2882917	2882921	.	-	.	ID=id3287;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	2883157	2883205	.	-	.	ID=id3288;gbkey=stem_loop
NC_003888.3	RefSeq	gene	2883219	2883956	.	-	.	ID=gene2660;Dbxref=GeneID:1098085;Name=SC8E4A.21c;gbkey=Gene;gene=SC8E4A.21c;gene_biotype=protein_coding;gene_synonym=SC8E4A.21c;locus_tag=SCO2651
NC_003888.3	RefSeq	CDS	2883219	2883956	.	-	0	ID=cds2614;Parent=gene2660;Dbxref=Genbank:NP_626887.1,GeneID:1098085;Name=NP_626887.1;Note=SC8E4A.21c%2C possible dehydrogenase/reductase ( hypothetical protein)%2C len: 245 aa%3B similar to TR:CAB52925 (EMBL:AL109949) Streptomyces coelicolor oxidoreductase SCJ11.40%2C 250 aa%3B fasta scores: opt: 717 z-score: 778.8 E(): 0%3B 47.6%25 identity in 250 aa overlap and to SW:LINX_PSEPA (EMBL:D23722) Pseudomonas paucimobilis 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase (EC 1.1.-.-) LinX%2C 250 aa%3B fasta scores: opt: 446 z-score: 488.9 E(): 8e-20%3B 34.3%25 identity in 248 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain. Contains possible N-terminal region signal peptide sequence dehydrogenases/reductases family signature;gbkey=CDS;gene=SC8E4A.21c;product=dehydrogenase/reductase;protein_id=NP_626887.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2883243	2883335	.	-	.	ID=id3289;Dbxref=GeneID:1098085;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 49.60%2C E-value 2e-12;gbkey=misc_feature;gene=SC8E4A.21c
NC_003888.3	RefSeq	sequence_feature	2883396	2883935	.	-	.	ID=id3290;Dbxref=GeneID:1098085;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 195.90%2C E-value 6.5e-55;gbkey=misc_feature;gene=SC8E4A.21c
NC_003888.3	RefSeq	sequence_feature	2883459	2883545	.	-	.	ID=id3291;Dbxref=GeneID:1098085;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC8E4A.21c
NC_003888.3	RefSeq	ribosome_entry_site	2883965	2883968	.	-	.	ID=id3292;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	2884074	2884078	.	+	.	ID=id3293;gbkey=RBS
NC_003888.3	RefSeq	gene	2884084	2884518	.	+	.	ID=gene2661;Dbxref=GeneID:1098086;Name=SC8E4A.22;gbkey=Gene;gene=SC8E4A.22;gene_biotype=protein_coding;gene_synonym=SC8E4A.22;locus_tag=SCO2652
NC_003888.3	RefSeq	CDS	2884084	2884518	.	+	0	ID=cds2615;Parent=gene2661;Dbxref=Genbank:NP_626888.1,GeneID:1098086;Name=NP_626888.1;Note=SC8E4A.22%2C hypothetical protein%2C len: 144 aa%3B similar to TR:P71036 (EMBL:Y08559) Bacillus subtilis hypothetical 14.7 kD protein YwnA%2C 133 aa%3B fasta scores: opt: 301 z-score: 389.2 E(): 2.9e-14%3B 38.4%25 identity in 138 aa overlap;gbkey=CDS;gene=SC8E4A.22;product=hypothetical protein;protein_id=NP_626888.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2884751	2884756	.	+	.	ID=id3294;gbkey=RBS
NC_003888.3	RefSeq	gene	2884761	2885426	.	+	.	ID=gene2662;Dbxref=GeneID:1098087;Name=SC8E4A.23;gbkey=Gene;gene=SC8E4A.23;gene_biotype=protein_coding;gene_synonym=SC8E4A.23;locus_tag=SCO2653
NC_003888.3	RefSeq	CDS	2884761	2885426	.	+	0	ID=cds2616;Parent=gene2662;Dbxref=Genbank:NP_626889.1,GeneID:1098087;Name=NP_626889.1;Note=SC8E4A.23%2C hypothetical protein%2C len: 221 aa%3B similar to SW:Y089_MYCTU (EMBL:Z74410) Mycobacterium tuberculosis  methyltransferase RV0089 (EC 2.1.1.-) MTCY251.07%2C 197aa%2C fasta scores: opt: 258 z-score: 309.5 E(): 7.9e-10%3B 29.6%25 identity in 203 aa overlap and to TR:AAF09618 (EMBL:AE001866) Deinococcus radiodurans methyltransferase%2C DR0026%2C 269 aa%3B fasta scores: opt: 188 z-score: 226.5 E(): 3.3e-05%3B 32.7%25 identity in 168 aa overlap;gbkey=CDS;gene=SC8E4A.23;product=hypothetical protein;protein_id=NP_626889.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2885472	2885477	.	+	.	ID=id3295;gbkey=RBS
NC_003888.3	RefSeq	gene	2885483	2886067	.	+	.	ID=gene2663;Dbxref=GeneID:1098088;Name=SC8E4A.24;gbkey=Gene;gene=SC8E4A.24;gene_biotype=protein_coding;gene_synonym=SC8E4A.24;locus_tag=SCO2654
NC_003888.3	RefSeq	CDS	2885483	2886067	.	+	0	ID=cds2617;Parent=gene2663;Dbxref=Genbank:NP_626890.1,GeneID:1098088;Name=NP_626890.1;Note=SC8E4A.24%2C hypothetical protein%2C len: 194 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB56360 (EMBL:AL118514) Streptomyces coelicolor hypothetical 21.6 kD protein SCD25.16c%2C 194 aa%3B fasta scores: opt: 700 z-score: 857.1 E(): 0%3B 58.5%25 identity in 188 aa overlap;gbkey=CDS;gene=SC8E4A.24;product=hypothetical protein;protein_id=NP_626890.1;transl_table=11
NC_003888.3	RefSeq	gene	2886105	2886641	.	-	.	ID=gene2664;Dbxref=GeneID:1098089;Name=SC8E4A.25c;gbkey=Gene;gene=SC8E4A.25c;gene_biotype=protein_coding;gene_synonym=SC8E4A.25c;locus_tag=SCO2655
NC_003888.3	RefSeq	CDS	2886105	2886641	.	-	0	ID=cds2618;Parent=gene2664;Dbxref=Genbank:NP_626891.1,GeneID:1098089;Name=NP_626891.1;Note=SC8E4A.25c%2C hypothetical protein%2C len: 178 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q9X7B4 (EMBL:AL049913) Mycobacterium leprae hypothetical 23.9 kD protein MLCB1610.15%2C 215 aa%3B fasta scores: opt: 589 z-score: 757.6 E(): 0%3B 52.8%25 identity in 161 aa overlap. Contains Pfam match to entry PF01844 HNH%2C HNH endonuclease;gbkey=CDS;gene=SC8E4A.25c;product=hypothetical protein;protein_id=NP_626891.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2886267	2886401	.	-	.	ID=id3296;Dbxref=GeneID:1098089;Note=Pfam match to entry PF01844 HNH%2C HNH endonuclease%2C score 41.40%2C E-value 2e-08;gbkey=misc_feature;gene=SC8E4A.25c
NC_003888.3	RefSeq	ribosome_entry_site	2886647	2886652	.	-	.	ID=id3297;gbkey=RBS
NC_003888.3	RefSeq	gene	2886859	2888085	.	+	.	ID=gene2665;Dbxref=GeneID:1098090;Name=SC8E4A.26;gbkey=Gene;gene=SC8E4A.26;gene_biotype=protein_coding;gene_synonym=SC8E4A.26;locus_tag=SCO2656
NC_003888.3	RefSeq	CDS	2886859	2888085	.	+	0	ID=cds2619;Parent=gene2665;Dbxref=Genbank:NP_626892.1,GeneID:1098090;Name=NP_626892.1;Note=SC8E4A.26%2C possible membrane protein%2C len: 408 aa%3B similar to various hypothetical proteins%2C e.g. TR:Q9XA89 (EMBL:AL096837) Streptomyces coelicolor hypothetical 36.1 kD protein SCF43A.26c%2C 333 aa%3B fasta scores: opt: 661 z-score: 668.4 E(): 8.1e-30%3B 42.3%25 identity in 317 aa overlap. Contains Pfam match to entry PF00924 UPF0003%2C Uncharacterized protein family UPF0003 and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8E4A.26;product=hypothetical protein;protein_id=NP_626892.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2887162	2887941	.	+	.	ID=id3298;Dbxref=GeneID:1098090;Note=Pfam match to entry PF00924 UPF0003%2C Uncharacterized protein family UPF0003%2C score 36.80%2C E-value 4.9e-10;gbkey=misc_feature;gene=SC8E4A.26
NC_003888.3	RefSeq	sequence_feature	2887849	2887872	.	+	.	ID=id3299;Dbxref=GeneID:1098090;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8E4A.26
NC_003888.3	RefSeq	ribosome_entry_site	2888288	2888293	.	+	.	ID=id3300;gbkey=RBS
NC_003888.3	RefSeq	gene	2888297	2889526	.	+	.	ID=gene2666;Dbxref=GeneID:1098091;Name=SC8E4A.27;gbkey=Gene;gene=SC8E4A.27;gene_biotype=protein_coding;gene_synonym=SC8E4A.27;locus_tag=SCO2657
NC_003888.3	RefSeq	CDS	2888297	2889526	.	+	0	ID=cds2620;Parent=gene2666;Dbxref=Genbank:NP_626893.1,GeneID:1098091;Name=NP_626893.1;Note=SC8E4A.27%2C possible ROK-family transcriptional regulatory protein%2C len: 409 aa%3B similar to TR:O69941 (EMBL:AL023862) Streptomyces coelicolor hypothetical ROK family protein (fragment) SC3F9.01%2C 403 aa%3B fasta scores: opt: 456 z-score: 480.7 E(): 2.3e-19%3B 30.8%25 identity in 396 aa overlap and to SW:XYLR_CALSR (EMBL:L18965) Caldicellulosiruptor sp.  xylose repressor XylR%2C 399 aa%3B fasta scores: opt: 381 z-score: 402.9 E(): 5e-15%3B 25.2%25 identity in 361 aa overlap. Contains Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family and Pfam match to entry PF00480 ROK%2C ROK family. Contains also possible helix-turn-helix motif at residues 32..53 (+5.09 SD);gbkey=CDS;gene=SC8E4A.27;product=transcriptional regulator;protein_id=NP_626893.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2888399	2888491	.	+	.	ID=id3301;Dbxref=GeneID:1098091;Note=Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family%2C score 15.10%2C E-value 0.0023;gbkey=misc_feature;gene=SC8E4A.27
NC_003888.3	RefSeq	sequence_feature	2888573	2889049	.	+	.	ID=id3302;Dbxref=GeneID:1098091;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 68.80%2C E-value 2.2e-19;gbkey=misc_feature;gene=SC8E4A.27
NC_003888.3	RefSeq	ribosome_entry_site	2889590	2889593	.	+	.	ID=id3303;gbkey=RBS
NC_003888.3	RefSeq	gene	2889601	2890938	.	+	.	ID=gene2667;Dbxref=GeneID:1098092;Name=SC6D10.01;gbkey=Gene;gene=SC6D10.01;gene_biotype=protein_coding;gene_synonym=SC6D10.01,SC8E4A.28;locus_tag=SCO2658
NC_003888.3	RefSeq	CDS	2889601	2890938	.	+	0	ID=cds2621;Parent=gene2667;Dbxref=Genbank:NP_733579.1,GeneID:1098092;Name=NP_733579.1;Note=SC6D10.01%2C possible sugar-binding protein (partial)%2C len: > 273 aa%3B similar to TR:CAB49101 (EMBL:AJ248283) Pyrococcus abyssi maltose-binding periplasmic protein precursor MalE%2C 453 aa%3B fasta scores: opt: 246 z-score: 288.7 E(): 1.1e-08%3B 24.0%25 identity in 271 aa overlap and to SW:MALX_STRPN (EMBL:L08611) Streptococcus pneumoniae maltose/maltodextrin-binding protein precursor MalX%2C 423 aa%3B fasta scores: opt: 184 z-score: 217.6 E(): 0.0001%3B 22.9%25 identity in 279 aa overlap~SC8E4A.28%2C possible  sugar-binding protein (fragment)%2C len: >205 aa%3B similar to TR:O87856 (EMBL:AL031013) Streptomyces coelicolor  sugar binding protein SC8A6.22%2C 438 aa%3B fasta scores: opt: 314 z-score: 373.2 E(): 2.5e-13%3B 38.8%25 identity in 206 aa overlap and to TR:O51923 (EMBL:AF012836) Thermococcus litoralis trehalose/maltose binding protein MalE%2C 450 aa%3B fasta scores: opt: 272 z-score: 323.9 E(): 1.4e-10%3B 31.7%25 identity in 183 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal sequence peptide;gbkey=CDS;gene=SC6D10.01;product=sugar-binding protein;protein_id=NP_733579.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2889643	2889675	.	+	.	ID=id3304;Dbxref=GeneID:1098092;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6D10.01
NC_003888.3	RefSeq	sequence_feature	2890036	2890215	.	+	.	ID=id3305;Dbxref=GeneID:1098092;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 88.80%2C E-value 1.1e-22;gbkey=misc_feature;gene=SC6D10.01
NC_003888.3	RefSeq	gene	2890945	2891889	.	+	.	ID=gene2668;Dbxref=GeneID:1098093;Name=SC6D10.02;gbkey=Gene;gene=SC6D10.02;gene_biotype=protein_coding;gene_synonym=SC6D10.02;locus_tag=SCO2659
NC_003888.3	RefSeq	CDS	2890945	2891889	.	+	0	ID=cds2622;Parent=gene2668;Dbxref=Genbank:NP_626894.1,GeneID:1098093;Name=NP_626894.1;Note=SC6D10.02%2C possible sugar transport system permease%2C len: 314 aa%3B similar to TR:Q9X6C4 (EMBL:AF135398) Thermus brockianus integral membrane protein BdtF%2C 280 aa%3B fasta scores: opt: 498 z-score: 582.4 E(): 5e-25%3B 35.4%25 identity in 288 aa overlap and to SW:LACF_AGRRD (EMBL:X66596) Agrobacterium radiobacter lactose transport system permease LacF%2C 298 aa%3B fasta scores: opt: 437 z-score: 511.6 E(): 4.4e-21%3B 31.1%25 identity in 315 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6D10.02;product=sugar transport system permease;protein_id=NP_626894.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2891491	2891769	.	+	.	ID=id3306;Dbxref=GeneID:1098093;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 59.00%2C E-value 1e-13;gbkey=misc_feature;gene=SC6D10.02
NC_003888.3	RefSeq	sequence_feature	2891494	2891580	.	+	.	ID=id3307;Dbxref=GeneID:1098093;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC6D10.02
NC_003888.3	RefSeq	gene	2891886	2892797	.	+	.	ID=gene2669;Dbxref=GeneID:1098094;Name=SC6D10.03;gbkey=Gene;gene=SC6D10.03;gene_biotype=protein_coding;gene_synonym=SC6D10.03;locus_tag=SCO2660
NC_003888.3	RefSeq	CDS	2891886	2892797	.	+	0	ID=cds2623;Parent=gene2669;Dbxref=Genbank:NP_626895.1,GeneID:1098094;Name=NP_626895.1;Note=SC6D10.03%2C possible sugar transport membrane protein%2C len: 303 aa%3B similar to TR:CAB59597 (EMBL:AL132662) Streptomyces coelicolor probable sugar transport inner membrane protein SCF11.20%2C 299 aa%3B fasta scores: opt: 662 z-score: 806.9 E(): 0%3B 38.4%25 identity in 297 aa overlap and to SW:YESQ_BACSU (EMBL:Z99107) Bacillus subtilis probable ABC transporter permease YesQ%2C 296 aa%3B fasta scores: opt: 588 z-score: 717.5 E(): 1.5e-32%3B 33.2%25 identity in 304 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6D10.03;product=sugar transport membrane protein;protein_id=NP_626895.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2892441	2892674	.	+	.	ID=id3308;Dbxref=GeneID:1098094;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 64.10%2C E-value 3.1e-15;gbkey=misc_feature;gene=SC6D10.03
NC_003888.3	RefSeq	gene	2892805	2894070	.	+	.	ID=gene2670;Dbxref=GeneID:1098095;Name=SC6D10.04;gbkey=Gene;gene=SC6D10.04;gene_biotype=protein_coding;gene_synonym=SC6D10.04;locus_tag=SCO2661
NC_003888.3	RefSeq	CDS	2892805	2894070	.	+	0	ID=cds2624;Parent=gene2670;Dbxref=Genbank:NP_626896.1,GeneID:1098095;Name=NP_626896.1;Note=SC6D10.04%2C possible sugar hydrolase%2C len: 421 aa%3B similar to SW:CELF_ECOLI (EMBL:X52890) Escherichia coli 6-phospho-beta-glucosidase (EC 3.2.1.86) CelF%2C 450 aa%3B fasta scores: opt: 556 z-score: 624.0 E(): 2.4e-27%3B 36.0%25 identity in 431 aa overlap and to SW:AGAL_ECOLI (EMBL:X04894) Escherichia coli alpha-galactosidase (EC 3.2.1.22) (melibiase) MelA%2C 451 aa%3B fasta scores: opt: 300 z-score: 338.4 E(): 1.9e-11%3B 25.5%25 identity in 459 aa overlap;gbkey=CDS;gene=SC6D10.04;product=sugar hydrolase;protein_id=NP_626896.1;transl_table=11
NC_003888.3	RefSeq	gene	2894115	2895032	.	+	.	ID=gene2671;Dbxref=GeneID:1098096;Name=SC6D10.05;gbkey=Gene;gene=SC6D10.05;gene_biotype=protein_coding;gene_synonym=SC6D10.05;locus_tag=SCO2662
NC_003888.3	RefSeq	CDS	2894115	2895032	.	+	0	ID=cds2625;Parent=gene2671;Dbxref=Genbank:NP_626897.1,GeneID:1098096;Name=NP_626897.1;Note=SC6D10.05%2C possible kinase%2C len: 305 aa%3B similar to TR:CAB61848 (EMBL:AJ242910) Homo sapiens N-acetylglucosamine kinase (EC 2.7.1.59)%2C 344 aa%3B fasta scores: opt: 192 z-score: 223.6 E(): 4.8e-05%3B 24.5%25 identity in 253 aa overlap and to TR:CAB61849 (EMBL:AJ242909) Mus musculus N-acetylglucosamine kinase (EC 2.7.1.59)%2C 343 aa%3B fasta scores: opt: 180 z-score: 210.1 E(): 0.00027%3B 24.4%25 identity in 250 aa overlap;gbkey=CDS;gene=SC6D10.05;product=kinase;protein_id=NP_626897.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2895256	2895259	.	+	.	ID=id3309;gbkey=RBS
NC_003888.3	RefSeq	gene	2895262	2896551	.	+	.	ID=gene2672;Dbxref=GeneID:1098097;Name=SC6D10.06;gbkey=Gene;gene=SC6D10.06;gene_biotype=protein_coding;gene_synonym=SC6D10.06;locus_tag=SCO2663
NC_003888.3	RefSeq	CDS	2895262	2896551	.	+	0	ID=cds2626;Parent=gene2672;Dbxref=Genbank:NP_626898.1,GeneID:1098097;Name=NP_626898.1;Note=SC6D10.06%2C possible hypothetical protein%2C len: 429 aa%3B similar to TR:P96258 (EMBL:Z84724) Mycobacterium tuberculosis hypothetical 47.1 kD protein MTCY22G10.08c%2C 439 aa%3B fasta scores: opt: 430 z-score: 482.8 E(): 1.8e-19%3B 30.9%25 identity in 427 aa overlap and to TR:Q9ZBL6 (EMBL:AL035159) Mycobacterium leprae membrane protein MLCB1450.21c%2C 403 aa%3B fasta scores: opt: 412 z-score: 463.3 E(): 2.1e-18%3B 29.6%25 identity in 423 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC6D10.06;product=hypothetical protein;protein_id=NP_626898.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2896630	2896633	.	+	.	ID=id3310;gbkey=RBS
NC_003888.3	RefSeq	gene	2896634	2897692	.	+	.	ID=gene2673;Dbxref=GeneID:1098098;Name=SC6D10.07;gbkey=Gene;gene=SC6D10.07;gene_biotype=protein_coding;gene_synonym=SC6D10.07;locus_tag=SCO2664
NC_003888.3	RefSeq	CDS	2896634	2897692	.	+	0	ID=cds2627;Parent=gene2673;Dbxref=Genbank:NP_626899.1,GeneID:1098098;Name=NP_626899.1;Note=SC6D10.07%2C possible sugar-binding protein%2C len: 352 aa%3B similar to TR:O34563 (EMBL:Z99117) Bacillus subtilis glutamine ABC transporter (glutamine-binding protein) GlnH%2C 27 33%3B fasta scores: opt: 474 z-score: 507.4 E(): 7.5e-21%3B 32.6%25 identity in 285 aa overlap and to SW:GLNH_BACST (EMBL:M61017) Bacillus stearothermophilus glutamine-binding protein precursor GlnH%2C 262 aa%3B fasta scores: opt: 414 z-score: 444.6 E(): 2.4e-17%3B 33.1%25 identity in 236 aa overlap. Contains Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C to Prosite entry PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site plus possible N-terminal region signal sequence peptide;gbkey=CDS;gene=SC6D10.07;product=sugar-binding protein;protein_id=NP_626899.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2896670	2896702	.	+	.	ID=id3311;Dbxref=GeneID:1098098;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6D10.07
NC_003888.3	RefSeq	sequence_feature	2896688	2897605	.	+	.	ID=id3312;Dbxref=GeneID:1098098;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 97.90%2C E-value 2e-25;gbkey=misc_feature;gene=SC6D10.07
NC_003888.3	RefSeq	sequence_feature	2897009	2897050	.	+	.	ID=id3313;Dbxref=GeneID:1098098;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature;gbkey=misc_feature;gene=SC6D10.07
NC_003888.3	RefSeq	ribosome_entry_site	2897753	2897756	.	+	.	ID=id3314;gbkey=RBS
NC_003888.3	RefSeq	gene	2897763	2899097	.	+	.	ID=gene2674;Dbxref=GeneID:1098099;Name=SC6D10.08;gbkey=Gene;gene=SC6D10.08;gene_biotype=protein_coding;gene_synonym=SC6D10.08;locus_tag=SCO2665
NC_003888.3	RefSeq	CDS	2897763	2899097	.	+	0	ID=cds2628;Parent=gene2674;Dbxref=Genbank:NP_626900.1,GeneID:1098099;Name=NP_626900.1;Note=SC6D10.08%2C unknown%2C len: 444 aa. Contains possible coiled-coil region;gbkey=CDS;gene=SC6D10.08;product=hypothetical protein;protein_id=NP_626900.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2899161	2899165	.	+	.	ID=id3315;gbkey=RBS
NC_003888.3	RefSeq	gene	2899173	2901884	.	+	.	ID=gene2675;Dbxref=GeneID:1098100;Name=SC6D10.09;gbkey=Gene;gene=SC6D10.09;gene_biotype=protein_coding;gene_synonym=SC6D10.09;locus_tag=SCO2666
NC_003888.3	RefSeq	CDS	2899173	2901884	.	+	0	ID=cds2629;Parent=gene2675;Dbxref=Genbank:NP_626901.1,GeneID:1098100;Name=NP_626901.1;Note=SC6D10.09%2C possible Ser/Thr protein kinase%2C len: 903 aa%3B similar to TR:Q9ZBL8 (EMBL:AL035159) Mycobacterium leprae  Ser/Thr kinase MLCB1450.19c%2C 763 aa%3B fasta scores: opt: 1045 z-score: 821.3 E(): 0%3B 42.0%25 identity in 793 aa overlap and to SW:PKN2_MYXXA (EMBL:M94857) Myxococcus xanthus Ser/Thr protein kinase Pkn2 (EC 2.7.1.-)%2C 830 aa%3B fasta scores: opt: 301 z-score: 243.3 E(): 3.8e-06%3B 28.9%25 identity in 433 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SC6D10.09;product=Ser/Thr protein kinase;protein_id=NP_626901.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2899788	2900384	.	+	.	ID=id3316;Dbxref=GeneID:1098100;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 56.00%2C E-value 2e-14;gbkey=misc_feature;gene=SC6D10.09
NC_003888.3	RefSeq	gene	2901888	2903336	.	+	.	ID=gene2676;Dbxref=GeneID:1098101;Name=SC6D10.10;gbkey=Gene;gene=SC6D10.10;gene_biotype=protein_coding;gene_synonym=SC6D10.10;locus_tag=SCO2667
NC_003888.3	RefSeq	CDS	2901888	2903336	.	+	0	ID=cds2630;Parent=gene2676;Dbxref=Genbank:NP_626902.1,GeneID:1098101;Name=NP_626902.1;Note=SC6D10.10%2C unknown%2C len: 482 aa;gbkey=CDS;gene=SC6D10.10;product=hypothetical protein;protein_id=NP_626902.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2903431	2903435	.	+	.	ID=id3317;gbkey=RBS
NC_003888.3	RefSeq	gene	2903439	2904797	.	+	.	ID=gene2677;Dbxref=GeneID:1098102;Name=SC6D10.11;gbkey=Gene;gene=SC6D10.11;gene_biotype=protein_coding;gene_synonym=SC6D10.11;locus_tag=SCO2668
NC_003888.3	RefSeq	CDS	2903439	2904797	.	+	0	ID=cds2631;Parent=gene2677;Dbxref=Genbank:NP_626903.1,GeneID:1098102;Name=NP_626903.1;Note=SC6D10.11%2C hypothetical protein%2C len: 452 aa%3B similar to TR:Y103_SYNY3 (EMBL:D64004) Synechocystis sp. hypothetical 45.8 kD protein SLL0103%2C 420 aa%3B fasta scores: opt: 265 z-score: 295.0 E(): 5.1e-09%3B 26.6%25 identity in 354 aa overlap;gbkey=CDS;gene=SC6D10.11;product=hypothetical protein;protein_id=NP_626903.1;transl_table=11
NC_003888.3	RefSeq	gene	2904844	2906658	.	+	.	ID=gene2678;Dbxref=GeneID:1098103;Name=SC6D10.12;gbkey=Gene;gene=SC6D10.12;gene_biotype=protein_coding;gene_synonym=SC6D10.12;locus_tag=SCO2669
NC_003888.3	RefSeq	CDS	2904844	2906658	.	+	0	ID=cds2632;Parent=gene2678;Dbxref=Genbank:NP_626904.1,GeneID:1098103;Name=NP_626904.1;Note=SC6D10.12%2C unknown%2C len: 604 aa. Glycine and proline rich. Contains Pfam match to entry PF00498 FHA%2C FHA domain;gbkey=CDS;gene=SC6D10.12;product=hypothetical protein;protein_id=NP_626904.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2906389	2906625	.	+	.	ID=id3318;Dbxref=GeneID:1098103;Note=Pfam match to entry PF00498 FHA%2C FHA domain%2C score 60.70%2C E-value 3.1e-14;gbkey=misc_feature;gene=SC6D10.12
NC_003888.3	RefSeq	gene	2906677	2907651	.	-	.	ID=gene2679;Dbxref=GeneID:1098104;Name=SC6D10.13c;gbkey=Gene;gene=SC6D10.13c;gene_biotype=protein_coding;gene_synonym=SC6D10.13c;locus_tag=SCO2670
NC_003888.3	RefSeq	CDS	2906677	2907651	.	-	0	ID=cds2633;Parent=gene2679;Dbxref=Genbank:NP_626905.1,GeneID:1098104;Name=NP_626905.1;Note=SC6D10.13c%2C probable O-methyltransferase%2C len: 324 aa%3B similar to TR:O30199 (EMBL:AE001104) Archaeoglobus fulgidus L-isoaspartyl protein carboxyl methyltransferase AF0036%2C 216 aa%3B fasta scores: opt: 373 z-score: 428.9 E(): 1.8e-16%3B 36.8%25 identity in 209 aa overlap and to SW:PIMT_METJA (EMBL:U67474) Methanococcus jannaschii protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)%2C 215 aa%3B fasta scores: opt: 356 z-score: 407.3 E(): 2.8e-15%3B 42.1%25 identity in 140 aa overlap. Contains Pfam match to entry PF01135 PCMT%2C Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) and match to Prosite entry PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature;gbkey=CDS;gene=SC6D10.13c;product=O-methyltransferase;protein_id=NP_626905.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2906911	2907612	.	-	.	ID=id3319;Dbxref=GeneID:1098104;Note=Pfam match to entry PF01135 PCMT%2C Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)%2C score 85.70%2C E-value 9.2e-22;gbkey=misc_feature;gene=SC6D10.13c
NC_003888.3	RefSeq	sequence_feature	2907094	2907141	.	-	.	ID=id3320;Dbxref=GeneID:1098104;Note=PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature;gbkey=misc_feature;gene=SC6D10.13c
NC_003888.3	RefSeq	ribosome_entry_site	2907653	2907657	.	-	.	ID=id3321;gbkey=RBS
NC_003888.3	RefSeq	gene	2907738	2908151	.	+	.	ID=gene2680;Dbxref=GeneID:1098105;Name=SC6D10.14;gbkey=Gene;gene=SC6D10.14;gene_biotype=protein_coding;gene_synonym=SC6D10.14;locus_tag=SCO2671
NC_003888.3	RefSeq	CDS	2907738	2908151	.	+	0	ID=cds2634;Parent=gene2680;Dbxref=Genbank:NP_626906.1,GeneID:1098105;Name=NP_626906.1;Note=SC6D10.14%2C possible globin%2C len: 137 aa%3B similar to TR:O53197 (EMBL:AL021246) Mycobacterium tuberculosis globin%2C 128 aa%3B fasta scores: opt: 466 z-score: 620.8 E(): 3.6e-27%3B 53.6%25 identity in 125 aa overlap and to SW:GLBN_NOSSN (EMBL:L47979) Nostoc sp. cyanoglobin GlbN%2C 118 aa%3B fasta scores: opt: 170 z-score: 236.1 E(): 9.7e-06%3B 25.2%25 identity in 119 aa overlap. Contains Pfam match to entry PF01152 Bac_globin%2C Protozoan/cyanobacterial globin;gbkey=CDS;gene=SC6D10.14;product=globin;protein_id=NP_626906.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2907783	2908142	.	+	.	ID=id3322;Dbxref=GeneID:1098105;Note=Pfam match to entry PF01152 Bac_globin%2C Protozoan/cyanobacterial globin%2C score -0.80%2C E-value 3.6e-05;gbkey=misc_feature;gene=SC6D10.14
NC_003888.3	RefSeq	gene	2908366	2911707	.	+	.	ID=gene2681;Dbxref=GeneID:1098106;Name=SC6D10.15;gbkey=Gene;gene=SC6D10.15;gene_biotype=protein_coding;gene_synonym=SC6D10.15;locus_tag=SCO2672
NC_003888.3	RefSeq	CDS	2908366	2911707	.	+	0	ID=cds2635;Parent=gene2681;Dbxref=Genbank:NP_626907.1,GeneID:1098106;Name=NP_626907.1;Note=SC6D10.15%2C possible membrane protein%2C len: 1113 aa%3B similar to TR:O86657 (EMBL:AL031182) Streptomyces coelicolor  integral membrane protein (fragment) SC4A2.01c%2C 653 aa%3B fasta scores: opt: 220 z-score: 208.2 E(): 0.00035%3B 27.8%25 identity in 654 aa overlap. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6D10.15;product=hypothetical protein;protein_id=NP_626907.1;transl_table=11
NC_003888.3	RefSeq	gene	2911856	2914579	.	+	.	ID=gene2682;Dbxref=GeneID:1098107;Name=SC6D10.16;gbkey=Gene;gene=SC6D10.16;gene_biotype=protein_coding;gene_synonym=SC6D10.16;locus_tag=SCO2673
NC_003888.3	RefSeq	CDS	2911856	2914579	.	+	0	ID=cds2636;Parent=gene2682;Dbxref=Genbank:NP_626908.1,GeneID:1098107;Name=NP_626908.1;Note=SC6D10.16%2C possible membrane protein%2C len: 907 aa%3B similar to TR:O86634 (EMBL:AL031155) Streptomyces coelicolor hypothetical 26.5 kD protein (fragment) SC3A7.33c%2C 259 aa%3B fasta scores: opt: 166 z-score: 178.0 E(): 0.017%3B 33.7%25 identity in 249 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6D10.16;product=hypothetical protein;protein_id=NP_626908.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2911910	2911942	.	+	.	ID=id3323;Dbxref=GeneID:1098107;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6D10.16
NC_003888.3	RefSeq	ribosome_entry_site	2914622	2914626	.	+	.	ID=id3324;gbkey=RBS
NC_003888.3	RefSeq	gene	2914632	2915591	.	+	.	ID=gene2683;Dbxref=GeneID:1098108;Name=SC6D10.17;gbkey=Gene;gene=SC6D10.17;gene_biotype=protein_coding;gene_synonym=SC6D10.17;locus_tag=SCO2674
NC_003888.3	RefSeq	CDS	2914632	2915591	.	+	0	ID=cds2637;Parent=gene2683;Dbxref=Genbank:NP_626909.1,GeneID:1098108;Name=NP_626909.1;Note=SC6D10.17%2C probable ABC transporter ATP-binding protein%2C len: 319 aa%3B similar to various ABC transporter%2C ATP-binding proteins%2C e.g. TR:O28803 (EMBL:AE001001) Archaeoglobus fulgidus ABC transporter ATP-binding protein AF1469%2C 226 aa%3B fasta scores: opt: 631 z-score: 717.1 E(): 1.6e-32%3B 45.7%25 identity in 219 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC6D10.17;product=ABC transporter ATP-binding protein;protein_id=NP_626909.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2914803	2915375	.	+	.	ID=id3325;Dbxref=GeneID:1098108;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 195.50%2C E-value 8.5e-55;gbkey=misc_feature;gene=SC6D10.17
NC_003888.3	RefSeq	sequence_feature	2914824	2914847	.	+	.	ID=id3326;Dbxref=GeneID:1098108;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6D10.17
NC_003888.3	RefSeq	sequence_feature	2915148	2915192	.	+	.	ID=id3327;Dbxref=GeneID:1098108;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC6D10.17
NC_003888.3	RefSeq	gene	2915616	2916332	.	-	.	ID=gene2684;Dbxref=GeneID:1098109;Name=SC6D10.18c;gbkey=Gene;gene=SC6D10.18c;gene_biotype=protein_coding;gene_synonym=SC6D10.18c;locus_tag=SCO2675
NC_003888.3	RefSeq	CDS	2915616	2916332	.	-	0	ID=cds2638;Parent=gene2684;Dbxref=Genbank:NP_626910.1,GeneID:1098109;Name=NP_626910.1;Note=SC6D10.18c%2C unknown%2C len: 238 aa;gbkey=CDS;gene=SC6D10.18c;product=hypothetical protein;protein_id=NP_626910.1;transl_table=11
NC_003888.3	RefSeq	gene	2916335	2916745	.	-	.	ID=gene2685;Dbxref=GeneID:1098110;Name=SC6D10.19c;gbkey=Gene;gene=SC6D10.19c;gene_biotype=protein_coding;gene_synonym=SC6D10.19c;locus_tag=SCO2676
NC_003888.3	RefSeq	CDS	2916335	2916745	.	-	0	ID=cds2639;Parent=gene2685;Dbxref=Genbank:NP_626911.1,GeneID:1098110;Name=NP_626911.1;Note=SC6D10.19c%2C hypothetical protein%2C len: 136 aa%3B similar to various hypothetical proteins%2C e.g. TR:O53202 (EMBL:AL021246) Mycobacterium tuberculosis hypothetical 15.8 kD protein MTV008.31c%2C 138 aa%3B fasta scores: opt: 236 z-score: 318.7 E(): 2.4e-10%3B 34.1%25 identity in 126 aa overlap;gbkey=CDS;gene=SC6D10.19c;product=hypothetical protein;protein_id=NP_626911.1;transl_table=11
NC_003888.3	RefSeq	gene	2916748	2918391	.	-	.	ID=gene2686;Dbxref=GeneID:1098111;Name=SC6D10.20c;gbkey=Gene;gene=SC6D10.20c;gene_biotype=protein_coding;gene_synonym=SC6D10.20c;locus_tag=SCO2677
NC_003888.3	RefSeq	CDS	2916748	2918391	.	-	0	ID=cds2640;Parent=gene2686;Dbxref=Genbank:NP_626912.1,GeneID:1098111;Name=NP_626912.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;gene=SC6D10.20c;product=ABC transporter ATP-binding protein;protein_id=NP_626912.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2916868	2917374	.	-	.	ID=id3328;Dbxref=GeneID:1098111;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 136.60%2C E-value 4.3e-37;gbkey=misc_feature;gene=SC6D10.20c
NC_003888.3	RefSeq	sequence_feature	2917042	2917086	.	-	.	ID=id3329;Dbxref=GeneID:1098111;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC6D10.20c
NC_003888.3	RefSeq	sequence_feature	2917330	2917353	.	-	.	ID=id3330;Dbxref=GeneID:1098111;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6D10.20c
NC_003888.3	RefSeq	sequence_feature	2917717	2918322	.	-	.	ID=id3331;Dbxref=GeneID:1098111;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 178.10%2C E-value 1.4e-49;gbkey=misc_feature;gene=SC6D10.20c
NC_003888.3	RefSeq	sequence_feature	2917891	2917935	.	-	.	ID=id3332;Dbxref=GeneID:1098111;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC6D10.20c
NC_003888.3	RefSeq	sequence_feature	2918278	2918301	.	-	.	ID=id3333;Dbxref=GeneID:1098111;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6D10.20c
NC_003888.3	RefSeq	gene	2918653	2919168	.	+	.	ID=gene2687;Dbxref=GeneID:1098112;Name=SC6D10.21;gbkey=Gene;gene=SC6D10.21;gene_biotype=protein_coding;gene_synonym=SC6D10.21;locus_tag=SCO2678
NC_003888.3	RefSeq	CDS	2918653	2919168	.	+	0	ID=cds2641;Parent=gene2687;Dbxref=Genbank:NP_626913.1,GeneID:1098112;Name=NP_626913.1;Note=SC6D10.21%2C hypothetical protein%2C len: 171 aa%3B similar to TR:CAB55735 (EMBL:AL117387) Streptomyces coelicolor hypothetical protein SCF41.32c%2C fasta scores: opt: 399 z-score: 488.3 E(): 8.7e-20%3B 45.6%25 identity in 169 aa overlap;gbkey=CDS;gene=SC6D10.21;product=hypothetical protein;protein_id=NP_626913.1;transl_table=11
NC_003888.3	RefSeq	gene	2919307	2919678	.	-	.	ID=gene2688;Dbxref=GeneID:1098113;Name=SC6D10.22c;gbkey=Gene;gene=SC6D10.22c;gene_biotype=protein_coding;gene_synonym=SC6D10.22c;locus_tag=SCO2679
NC_003888.3	RefSeq	CDS	2919307	2919678	.	-	0	ID=cds2642;Parent=gene2688;Dbxref=Genbank:NP_626914.1,GeneID:1098113;Name=NP_626914.1;Note=SC6D10.22c%2C possible lipoprotein%2C len: 123 aa%3B similar to TR:O86703 (EMBL:AL031515) Streptomyces coelicolor hypothetical protein SC5C7.06%2C 318 aa%3B fasta scores: opt: 99 z-score: 130.8 E(): 7.1%3B 29.8%25 identity in 94 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC6D10.22c;product=lipoprotein;protein_id=NP_626914.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2919619	2919651	.	-	.	ID=id3334;Dbxref=GeneID:1098113;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6D10.22c
NC_003888.3	RefSeq	gene	2920007	2920477	.	+	.	ID=gene2689;Dbxref=GeneID:1098114;Name=SC6D10.23;gbkey=Gene;gene=SC6D10.23;gene_biotype=protein_coding;gene_synonym=SC6D10.23,SCC61A.01;locus_tag=SCO2680
NC_003888.3	RefSeq	CDS	2920007	2920477	.	+	0	ID=cds2643;Parent=gene2689;Dbxref=Genbank:NP_733580.1,GeneID:1098114;Name=NP_733580.1;Note=SCC61A.01%2C conserved hypothetical protein%2C partial CDS%2C len: >153 aa%3B similar to others of unknown function from Streptomyces coelicolor eg. TR:O86768 (EMBL:AL031035) ATP /GTP-binding protein (886 aa) fasta scores%3B opt: 457%2C z-score: 460.9%2C E(): 3.2e-18%2C 48.6%25 identity in 146 aa overlap. Searches suggest a frameshift mutation between CDSs 01 and 02.~SC6D10.23%2C hypothetical protein (partial)%2C len: >85 aa%3B highly similar to N-terminal region of TR:O86768 (EMBL:AL031035) Streptomyces coelicolor ATP /GTP-binding%3D 333 z-score: 478.0 E(): 3.2e-19%3B 59.4%25 identity in 69 aa overlap;end_range=2920477,.;gbkey=CDS;gene=SC6D10.23;partial=true;product=hypothetical protein;protein_id=NP_733580.1;transl_table=11
NC_003888.3	RefSeq	gene	2920476	2922815	.	+	.	ID=gene2690;Dbxref=GeneID:1098115;Name=SCC61A.02;gbkey=Gene;gene=SCC61A.02;gene_biotype=protein_coding;gene_synonym=SCC61A.02;locus_tag=SCO2681
NC_003888.3	RefSeq	CDS	2920476	2922815	.	+	0	ID=cds2644;Parent=gene2690;Dbxref=Genbank:NP_626915.1,GeneID:1098115;Name=NP_626915.1;Note=SCC61A.02%2C possible ATP/GTP-binding protein%2C partial CDS%2C len: 727aa%3B similar to others from Streptomyces coelicolor eg. TR:CAB77406 (EMBL:AL160431) ATP /GTP-binding%3D z-score: 2917.3%2C E(): 0%2C 58.7%25 identity in 719 aa overlap. Hydrophilic C-terminal region contains 6 x 42 amino acid repeat (LGE(DEN)HP(DHR)TL(DA)SAH(SY)L(AG)(AVSH)(AVGTS)(LI) (HS)(DANY)(LF)GQ(YPD)(GAVT)(EDQ)A(RH)(RS)M(HDV)E(DY)TL(ED ) (RG)RRR(TI). Also contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) at the N-terminus. Searches suggest a frameshift mutation between CDSs 01 and 02.;gbkey=CDS;gene=SCC61A.02;partial=true;product=ATP /GTP-binding protein;protein_id=NP_626915.1;start_range=.,2920476;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2920626	2920629	.	+	.	ID=id3335;Dbxref=GeneID:1098115;gbkey=RBS;gene=SCC61A.02
NC_003888.3	RefSeq	sequence_feature	2920671	2920694	.	+	.	ID=id3336;Dbxref=GeneID:1098115;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC61A.02
NC_003888.3	RefSeq	repeat_region	2921781	2922681	.	-	.	ID=id3337;Note=Translated to amino acid repeat in CDS SCC61A.02.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	2922880	2924292	.	-	.	ID=gene2691;Dbxref=GeneID:1098116;Name=SCC61A.03c;gbkey=Gene;gene=SCC61A.03c;gene_biotype=protein_coding;gene_synonym=SCC61A.03c;locus_tag=SCO2682
NC_003888.3	RefSeq	CDS	2922880	2924292	.	-	0	ID=cds2645;Parent=gene2691;Dbxref=Genbank:NP_626916.1,GeneID:1098116;Name=NP_626916.1;Note=SCC61A.03c%2C possible membrane protein%2C len: 470 aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC61A.03c;product=hypothetical protein;protein_id=NP_626916.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2924299	2924304	.	-	.	ID=id3338;gbkey=RBS
NC_003888.3	RefSeq	gene	2924515	2924985	.	-	.	ID=gene2692;Dbxref=GeneID:1098117;Name=SCC61A.04c;gbkey=Gene;gene=SCC61A.04c;gene_biotype=protein_coding;gene_synonym=SCC61A.04c;locus_tag=SCO2683
NC_003888.3	RefSeq	CDS	2924515	2924985	.	-	0	ID=cds2646;Parent=gene2692;Dbxref=Genbank:NP_626917.1,GeneID:1098117;Name=NP_626917.1;Note=SCC61A.04c%2C possible single-strand DNA-binding protein%2C len: 156 aa%3B similar to many eg. SW:P71711 (SSB_MYCTU) single-strand binding protein from Mycobacterium tuberculosis (164 aa) fasta scores%3B opt: 259%2C z-score: 301.8%2C E(): 2.4e-09%2C 35.5%25 identity in 141 aa overlap and TR:Q9X8U3 (EMBL:AL049826) single-strand binding protein from Streptomyces coelicolor (199 aa) fasta scores%3B opt: 261%2C z-score: 302.7%2C E(): 2.1e-09%2C 42.5%25 identity in 120 aa overlap. Contains Pfam match to entry PF00436 SSB%2C Single-strand binding protein family.;gbkey=CDS;gene=SCC61A.04c;product=single-strand DNA-binding protein;protein_id=NP_626917.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2924692	2924985	.	-	.	ID=id3339;Dbxref=GeneID:1098117;Note=Pfam match to entry PF00436 SSB%2C Single-strand binding protein family%2C score 20.00%2C E-value 0.00012;gbkey=misc_feature;gene=SCC61A.04c
NC_003888.3	RefSeq	gene	2925258	2927738	.	-	.	ID=gene2693;Dbxref=GeneID:1098118;Name=SCC61A.05c;gbkey=Gene;gene=SCC61A.05c;gene_biotype=protein_coding;gene_synonym=SCC61A.05c;locus_tag=SCO2684
NC_003888.3	RefSeq	CDS	2925258	2927738	.	-	0	ID=cds2647;Parent=gene2693;Dbxref=Genbank:NP_626918.1,GeneID:1098118;Name=NP_626918.1;Note=SCC61A.05c%2C possible ATP-binding membrane protein%2C len: 826aa%3B no significant database similarities%2C N-terminal region rich in glycine/arginine/asparagine%2C C-terminal contains possible membrane-spanning hydrophobic region. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Note possible alternative downstream translational start sites.;gbkey=CDS;gene=SCC61A.05c;product=ATP-binding membrane protein;protein_id=NP_626918.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2926695	2926718	.	-	.	ID=id3340;Dbxref=GeneID:1098118;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC61A.05c
NC_003888.3	RefSeq	sequence_feature	2926943	2927744	.	-	.	ID=id3341;Note=Repetetive high G+C region which translates to glycine/arginine/asparagine-rich region in CDS SCC61A.05c.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2927742	2929349	.	-	.	ID=gene2694;Dbxref=GeneID:1098119;Name=SCC61A.06c;gbkey=Gene;gene=SCC61A.06c;gene_biotype=protein_coding;gene_synonym=SCC61A.06c;locus_tag=SCO2685
NC_003888.3	RefSeq	CDS	2927742	2929349	.	-	0	ID=cds2648;Parent=gene2694;Dbxref=Genbank:NP_626919.1,GeneID:1098119;Name=NP_626919.1;Note=SCC61A.06c%2C possible ATP-binding protein%2C len: 535aa%3B no significant database similarities. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Note possible alternative downstream translational start sites.;gbkey=CDS;gene=SCC61A.06c;product=ATP-binding protein;protein_id=NP_626919.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2927744	2927753	.	-	.	ID=id3342;Dbxref=GeneID:1098119;gbkey=RBS;gene=SCC61A.06c
NC_003888.3	RefSeq	sequence_feature	2929125	2929148	.	-	.	ID=id3343;Dbxref=GeneID:1098119;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC61A.06c
NC_003888.3	RefSeq	gene	2929681	2929756	.	+	.	ID=gene2695;Dbxref=GeneID:3240018;Name=SCOt18;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt18
NC_003888.3	RefSeq	tRNA	2929681	2929756	.	+	.	ID=rna24;Parent=gene2695;Dbxref=GeneID:3240018;Note=tRNA Arg anticodon TCT%2C Cove score 79.17;gbkey=tRNA;product=tRNA-Arg
NC_003888.3	RefSeq	exon	2929681	2929756	.	+	.	ID=id3344;Parent=rna24;Dbxref=GeneID:3240018;Note=tRNA Arg anticodon TCT%2C Cove score 79.17;gbkey=tRNA;product=tRNA-Arg
NC_003888.3	RefSeq	gene	2929823	2930839	.	-	.	ID=gene2696;Dbxref=GeneID:1098120;Name=SCC61A.07c;gbkey=Gene;gene=SCC61A.07c;gene_biotype=protein_coding;gene_synonym=SCC61A.07c;locus_tag=SCO2686
NC_003888.3	RefSeq	CDS	2929823	2930839	.	-	0	ID=cds2649;Parent=gene2696;Dbxref=Genbank:NP_626920.1,GeneID:1098120;Name=NP_626920.1;Note=SCC61A.07c%2C possible luxR-family transcriptional regulator%2C len: 338aa%3B similar to many eg. TR:Q56084 (EMBL:D63904) erythropoiesis-stimulating protein from Streptomyces thermoviolaceus (334 aa) fasta scores%3B opt: 393%2C z-score: 460.3%2C E(): 3.5e-18%2C 32.5%25 identity in 295 aa overlap and SW:Q01108 (BRPA_STRHY) bialaphos biosynthetic pathway regulatory protein from Streptomyces hygroscopicus (256 aa) fasta scores%3B opt: 178%2C z-score: 213.5%2C E(): 0.0002%2C 25.1%25 identity in 255 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and helix-turn-helix motif 276-297aa.;gbkey=CDS;gene=SCC61A.07c;product=LuxR family transcriptional regulator;protein_id=NP_626920.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2929871	2930062	.	-	.	ID=id3345;Dbxref=GeneID:1098120;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 22.70%2C E-value 0.00022;gbkey=misc_feature;gene=SCC61A.07c
NC_003888.3	RefSeq	sequence_feature	2930743	2931787	.	-	.	ID=id3346;Note=Region of low G+C content.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	2930844	2930851	.	-	.	ID=id3347;gbkey=RBS
NC_003888.3	RefSeq	gene	2931148	2931792	.	+	.	ID=gene2697;Dbxref=GeneID:1098121;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;gene_synonym=ribA1,SCC61A.08;locus_tag=SCO2687
NC_003888.3	RefSeq	CDS	2931148	2931792	.	+	0	ID=cds2650;Parent=gene2697;Dbxref=Genbank:NP_626921.1,GeneID:1098121;Name=NP_626921.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase II;protein_id=NP_626921.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2931196	2931714	.	+	.	ID=id3348;Dbxref=GeneID:1098121;Note=Pfam match to entry PF00925 GTP_cyclohydro2%2C GTP cyclohydrolase II%2C score 248.30%2C E-value 1e-70;gbkey=misc_feature;gene=ribA
NC_003888.3	RefSeq	gene	2931848	2932993	.	+	.	ID=gene2698;Dbxref=GeneID:1098122;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;gene_synonym=ribD,SCC61A.09;locus_tag=SCO2688
NC_003888.3	RefSeq	CDS	2931848	2932993	.	+	0	ID=cds2651;Parent=gene2698;Dbxref=Genbank:NP_626922.1,GeneID:1098122;Name=NP_626922.1;Note=SCC61A.09%2C ribD%2C riboflavin-specific deaminase%2C len: 381aa%3B similar to many eg. SW:P25539 (RIBD_ECOLI) ribD%2C riboflavin-specific deaminase from Escherichia coli (367 aa) fasta scores%3B opt: 581%2C z-score: 642.9%2C E(): 2.4e-28%2C 36.3%25 identity in 386 aa overlap. Contains Pfam match to entry PF01872 RibD_C%2C RibD C-terminal domain%2C Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region and PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.;gbkey=CDS;gene=ribD;product=riboflavin-specific deaminase;protein_id=NP_626922.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2931887	2932120	.	+	.	ID=id3349;Dbxref=GeneID:1098122;Note=Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region%2C score 99.90%2C E-value 4.9e-26;gbkey=misc_feature;gene=ribD
NC_003888.3	RefSeq	sequence_feature	2931980	2932096	.	+	.	ID=id3350;Dbxref=GeneID:1098122;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature;gbkey=misc_feature;gene=ribD
NC_003888.3	RefSeq	sequence_feature	2932271	2932924	.	+	.	ID=id3351;Dbxref=GeneID:1098122;Note=Pfam match to entry PF01872 RibD_C%2C RibD C-terminal domain%2C score 198.10%2C E-value 1.3e-55;gbkey=misc_feature;gene=ribD
NC_003888.3	RefSeq	ribosome_entry_site	2932979	2932983	.	+	.	ID=id3352;Dbxref=GeneID:1098122;gbkey=RBS;gene=ribD
NC_003888.3	RefSeq	gene	2932990	2934117	.	+	.	ID=gene2699;Dbxref=GeneID:1098123;Name=SCC61A.10;gbkey=Gene;gene=SCC61A.10;gene_biotype=protein_coding;gene_synonym=SCC61A.10;locus_tag=SCO2689
NC_003888.3	RefSeq	CDS	2932990	2934117	.	+	0	ID=cds2652;Parent=gene2699;Dbxref=Genbank:NP_626923.1,GeneID:1098123;Name=NP_626923.1;Note=SCC61A.10%2C possible membrane protein%2C len: 375aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC61A.10;product=hypothetical protein;protein_id=NP_626923.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2934102	2934105	.	+	.	ID=id3353;Dbxref=GeneID:1098123;gbkey=RBS;gene=SCC61A.10
NC_003888.3	RefSeq	gene	2934114	2935478	.	+	.	ID=gene2700;Dbxref=GeneID:1098124;Name=SCC61A.11;gbkey=Gene;gene=SCC61A.11;gene_biotype=protein_coding;gene_synonym=SCC61A.11;locus_tag=SCO2690
NC_003888.3	RefSeq	CDS	2934114	2935478	.	+	0	ID=cds2653;Parent=gene2700;Dbxref=Genbank:NP_626924.1,GeneID:1098124;Name=NP_626924.1;Note=SCC61A.11%2C possible membrane transport protein%2C len: 454aa%3B similar to eg. TR:Q54309 (EMBL:X86780) membrane transport protein from rapamycin biosynthetic gene cluster of Streptomyces hygroscopicus (453 aa) fasta scores%3B opt: 546%2C z-score: 566.6%2C E(): 4.2e-24%2C 27.7%25 identity in 452 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC61A.11;product=membrane transport protein;protein_id=NP_626924.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2935464	2935471	.	+	.	ID=id3354;Dbxref=GeneID:1098124;gbkey=RBS;gene=SCC61A.11
NC_003888.3	RefSeq	gene	2935475	2936632	.	+	.	ID=gene2701;Dbxref=GeneID:1098125;Name=SCC61A.12;gbkey=Gene;gene=SCC61A.12;gene_biotype=protein_coding;gene_synonym=SCC61A.12;locus_tag=SCO2691
NC_003888.3	RefSeq	CDS	2935475	2936632	.	+	0	ID=cds2654;Parent=gene2701;Dbxref=Genbank:NP_626925.1,GeneID:1098125;Name=NP_626925.1;Note=SCC61A.12%2C unknown%2C len: 385aa;gbkey=CDS;gene=SCC61A.12;product=hypothetical protein;protein_id=NP_626925.1;transl_table=11
NC_003888.3	RefSeq	gene	2936812	2938692	.	+	.	ID=gene2702;Dbxref=GeneID:1098126;Name=SCC61A.13;gbkey=Gene;gene=SCC61A.13;gene_biotype=protein_coding;gene_synonym=SCC61A.13;locus_tag=SCO2692
NC_003888.3	RefSeq	CDS	2936812	2938692	.	+	0	ID=cds2655;Parent=gene2702;Dbxref=Genbank:NP_626926.1,GeneID:1098126;Name=NP_626926.1;Note=SCC61A.13%2C possible repetetive protein%2C len: 626 aa%3B contains eleven (weak) Pfam matches to entry PF00400 WD40%2C WD domain%2C G-beta repeat and three Prosite matches to PS00678 Trp-Asp (WD) repeats signature.;gbkey=CDS;gene=SCC61A.13;product=repetative protein;protein_id=NP_626926.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2936839	2936955	.	+	.	ID=id3355;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 10.70%2C E-value 2.2;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2936962	2937078	.	+	.	ID=id3356;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 33.10%2C E-value 6.5e-06;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2937037	2937081	.	+	.	ID=id3357;Dbxref=GeneID:1098126;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2937088	2937201	.	+	.	ID=id3358;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 17.30%2C E-value 0.29;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2937211	2937324	.	+	.	ID=id3359;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 33.90%2C E-value 3.6e-06;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2937283	2937327	.	+	.	ID=id3360;Dbxref=GeneID:1098126;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2937331	2937444	.	+	.	ID=id3361;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 4.00%2C E-value 16;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2937451	2937567	.	+	.	ID=id3362;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 26.60%2C E-value 0.00058;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2937526	2937570	.	+	.	ID=id3363;Dbxref=GeneID:1098126;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2937733	2937843	.	+	.	ID=id3364;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 19.30%2C E-value 0.093;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2938111	2938224	.	+	.	ID=id3365;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 2.90%2C E-value 23;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2938231	2938353	.	+	.	ID=id3366;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 12.00%2C E-value 1.5;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2938363	2938482	.	+	.	ID=id3367;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 29.60%2C E-value 7.3e-05;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	sequence_feature	2938504	2938614	.	+	.	ID=id3368;Dbxref=GeneID:1098126;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 19.60%2C E-value 0.074;gbkey=misc_feature;gene=SCC61A.13
NC_003888.3	RefSeq	ribosome_entry_site	2938677	2938681	.	+	.	ID=id3369;Dbxref=GeneID:1098126;gbkey=RBS;gene=SCC61A.13
NC_003888.3	RefSeq	gene	2938689	2939690	.	+	.	ID=gene2703;Dbxref=GeneID:1098127;Name=SCC61A.14;gbkey=Gene;gene=SCC61A.14;gene_biotype=protein_coding;gene_synonym=SCC61A.14;locus_tag=SCO2693
NC_003888.3	RefSeq	CDS	2938689	2939690	.	+	0	ID=cds2656;Parent=gene2703;Dbxref=Genbank:NP_626927.1,GeneID:1098127;Name=NP_626927.1;Note=SCC61A.14%2C possible oxygenase (hypothetical protein)%2C len: 333 aa%3B similar to others from Streptomyces spp. e.g. TR:Q05582 (EMBL:L06214) clavaminate synthase 2 from Streptomyces clavuligerus (325 aa) fasta scores%3B opt: 582%2C z-score: 633.2%2C E(): 8.2e-28%2C 37.5%25 identity in 317 aa overlap and TR:Q9Z4Z5 (EMBL:AL035707) oxygenase from Streptomyces coelicolor (333 aa) opt: 1205%2C z-score: 1302.5%2C E(): 0%2C 59.4%25 identity in 320 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC61A.14;product=oxygenase;protein_id=NP_626927.1;transl_table=11
NC_003888.3	RefSeq	gene	2939719	2940261	.	+	.	ID=gene2704;Dbxref=GeneID:1098128;Name=SCC61A.15;gbkey=Gene;gene=SCC61A.15;gene_biotype=protein_coding;gene_synonym=SCC61A.15;locus_tag=SCO2694
NC_003888.3	RefSeq	CDS	2939719	2940261	.	+	0	ID=cds2657;Parent=gene2704;Dbxref=Genbank:NP_626928.1,GeneID:1098128;Name=NP_626928.1;Note=SCC61A.15%2C unknown%2C len: 180aa;gbkey=CDS;gene=SCC61A.15;product=hypothetical protein;protein_id=NP_626928.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2940372	2940377	.	+	.	ID=id3370;gbkey=RBS
NC_003888.3	RefSeq	gene	2940382	2941152	.	+	.	ID=gene2705;Dbxref=GeneID:1098129;Name=SCC61A.16;gbkey=Gene;gene=SCC61A.16;gene_biotype=protein_coding;gene_synonym=SCC61A.16;locus_tag=SCO2695
NC_003888.3	RefSeq	CDS	2940382	2941152	.	+	0	ID=cds2658;Parent=gene2705;Dbxref=Genbank:NP_626929.1,GeneID:1098129;Name=NP_626929.1;Note=SCC61A.16%2C unknown%2C len: 256 aa%3B region similar to others eg. TR:O69671 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (425 aa) fasta scores%3B opt: 266%2C z-score: 305.4%2C E(): 1.5e-09%2C 32.3%25 identity in 248 aa overlap.;gbkey=CDS;gene=SCC61A.16;product=hypothetical protein;protein_id=NP_626929.1;transl_table=11
NC_003888.3	RefSeq	gene	2941209	2942201	.	+	.	ID=gene2706;Dbxref=GeneID:1098130;Name=SCC61A.17;gbkey=Gene;gene=SCC61A.17;gene_biotype=protein_coding;gene_synonym=SCC61A.17;locus_tag=SCO2696
NC_003888.3	RefSeq	CDS	2941209	2942201	.	+	0	ID=cds2659;Parent=gene2706;Dbxref=Genbank:NP_626930.1,GeneID:1098130;Name=NP_626930.1;Note=SCC61A.17%2C possible 2-hydroxyacid-family dehydrogenase%2C len: 330 aa%3B similar to many e.g. SW:P35136 (SERA_BACSU) D-3-phosphoglycerate dehydrogenase from Bacillus subtilis (525 aa) fasta scores%3B opt: 519%2C z-score: 581.8%2C E(): 6e-25%2C 35.7%25 identity in 294 aa overlap. Contains Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases.;gbkey=CDS;gene=SCC61A.17;product=2-hydroxyacid dehydrogenase;protein_id=NP_626930.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2941464	2942066	.	+	.	ID=id3371;Dbxref=GeneID:1098130;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 117.90%2C E-value 6e-48;gbkey=misc_feature;gene=SCC61A.17
NC_003888.3	RefSeq	gene	2942208	2942786	.	-	.	ID=gene2707;Dbxref=GeneID:1098131;Name=SCC61A.18c;gbkey=Gene;gene=SCC61A.18c;gene_biotype=protein_coding;gene_synonym=SCC61A.18c;locus_tag=SCO2697
NC_003888.3	RefSeq	CDS	2942208	2942786	.	-	0	ID=cds2660;Parent=gene2707;Dbxref=Genbank:NP_626931.1,GeneID:1098131;Name=NP_626931.1;Note=SCC61A.18c%2C possible hypothetical protein%2C len: 192aa%3B contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;gene=SCC61A.18c;product=hypothetical protein;protein_id=NP_626931.1;transl_table=11
NC_003888.3	RefSeq	gene	2942785	2942904	.	+	.	ID=gene2708;Dbxref=GeneID:1098132;Name=SCC61A.19;gbkey=Gene;gene=SCC61A.19;gene_biotype=protein_coding;gene_synonym=SCC61A.19;locus_tag=SCO2698
NC_003888.3	RefSeq	CDS	2942785	2942904	.	+	0	ID=cds2661;Parent=gene2708;Dbxref=Genbank:NP_626932.1,GeneID:1098132;Name=NP_626932.1;Note=SCC61A.19%2C possible small hydrophilic protein%2C len: 39 aa;gbkey=CDS;gene=SCC61A.19;product=small hydrophilic protein;protein_id=NP_626932.1;transl_table=11
NC_003888.3	RefSeq	gene	2943092	2943364	.	+	.	ID=gene2709;Dbxref=GeneID:1098133;Name=SCC61A.20;gbkey=Gene;gene=SCC61A.20;gene_biotype=protein_coding;gene_synonym=SCC61A.20;locus_tag=SCO2699
NC_003888.3	RefSeq	CDS	2943092	2943364	.	+	0	ID=cds2662;Parent=gene2709;Dbxref=Genbank:NP_626933.1,GeneID:1098133;Name=NP_626933.1;Note=SCC61A.20%2C possible small membrane protein%2C len: 90 aa%3B strongly similar to others from Streptomyces coelicolor eg. TR:CAB75306 (EMBL:AL139164) small hypothetical protein (75 aa) fasta scores%3B opt: 338%2C z-score: 381.0%2C E(): 9.2e-14%2C 68.4%25 identity in 76 aa overlap and neighbouring CDS SCC61A.26c. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCC61A.20;product=small membrane protein;protein_id=NP_626933.1;transl_table=11
NC_003888.3	RefSeq	gene	2943456	2944322	.	-	.	ID=gene2710;Dbxref=GeneID:1098134;Name=melC2;gbkey=Gene;gene=melC2;gene_biotype=protein_coding;gene_synonym=melC2,SCC61A.21c;locus_tag=SCO2700
NC_003888.3	RefSeq	CDS	2943456	2944322	.	-	0	ID=cds2663;Parent=gene2710;Dbxref=Genbank:NP_626934.1,GeneID:1098134;Name=NP_626934.1;Note=SCC61A.21c%2C melC2%2C tyrosinase (monophenol monooxygenase)%2C len: 288 aa%3B strongly similar to many eg. SW:P06845 (TYRO_STRGA) tyrosinase from Streptomyces glaucescens (273 aa) fasta scores%3B opt: 682%2C z-score: 837.0%2C E(): 0%2C 52.0%25 identity in 277 aa overlap. Contains Pfam match to entry PF00264 tyrosinase%2C Common central domain of tyrosinase Prosite match to PS00497 Tyrosinase CuA-binding region signature and Prosite match to PS00498 Tyrosinase and hemocyanins CuB-binding region signature.;gbkey=CDS;gene=melC2;product=tyrosinase;protein_id=NP_626934.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2943570	2944169	.	-	.	ID=id3372;Dbxref=GeneID:1098134;Note=Pfam match to entry PF00264 tyrosinase%2C Common central domain of tyrosinase%2C score 144.70%2C E-value 2.1e-40;gbkey=misc_feature;gene=melC2
NC_003888.3	RefSeq	sequence_feature	2943633	2943668	.	-	.	ID=id3373;Dbxref=GeneID:1098134;Note=PS00498 Tyrosinase and hemocyanins CuB-binding region signature;gbkey=misc_feature;gene=melC2
NC_003888.3	RefSeq	sequence_feature	2944107	2944160	.	-	.	ID=id3374;Dbxref=GeneID:1098134;Note=PS00497 Tyrosinase CuA-binding region signature;gbkey=misc_feature;gene=melC2
NC_003888.3	RefSeq	gene	2944306	2944875	.	-	.	ID=gene2711;Dbxref=GeneID:1098135;Name=melC1;gbkey=Gene;gene=melC1;gene_biotype=protein_coding;gene_synonym=melC1,SCC61A.22c;locus_tag=SCO2701
NC_003888.3	RefSeq	CDS	2944306	2944875	.	-	0	ID=cds2664;Parent=gene2711;Dbxref=Genbank:NP_626935.1,GeneID:1098135;Name=NP_626935.1;Note=SCC61A.22c%2C melC1%2C tyrosinase co-factor%2C len: 189 aa%3B similar to others from Streptomyces spp. e.g. SW:P55047 (TYRT_STRGA) tyrosinase co-factor from Streptomyces glaucescens (134 aa) fasta scores%3B opt: 304%2C z-score: 323.4%2C E(): 1.5e-10%2C 44.4%25 identity in 133 aa overlap;gbkey=CDS;gene=melC1;product=tyrosinase co-factor;protein_id=NP_626935.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2944324	2944332	.	-	.	ID=id3375;Dbxref=GeneID:1098135;gbkey=RBS;gene=melC1
NC_003888.3	RefSeq	gene	2944995	2945510	.	-	.	ID=gene2712;Dbxref=GeneID:1098136;Name=SCC61A.23c;gbkey=Gene;gene=SCC61A.23c;gene_biotype=protein_coding;gene_synonym=SCC61A.23c;locus_tag=SCO2702
NC_003888.3	RefSeq	CDS	2944995	2945510	.	-	0	ID=cds2665;Parent=gene2712;Dbxref=Genbank:NP_626936.1,GeneID:1098136;Name=NP_626936.1;Note=SCC61A.23c%2C possible hypothetical protein%2C len: 171aa%3B contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;gene=SCC61A.23c;product=hypothetical protein;protein_id=NP_626936.1;transl_table=11
NC_003888.3	RefSeq	gene	2945615	2945917	.	-	.	ID=gene2713;Dbxref=GeneID:1098137;Name=SCC61A.24c;gbkey=Gene;gene=SCC61A.24c;gene_biotype=protein_coding;gene_synonym=SCC61A.24c;locus_tag=SCO2703
NC_003888.3	RefSeq	CDS	2945615	2945917	.	-	0	ID=cds2666;Parent=gene2713;Dbxref=Genbank:NP_626937.1,GeneID:1098137;Name=NP_626937.1;Note=SCC61A.24c%2C possible membrane protein%2C len: 100 aa%3B similar to TR:CAB75306 (EMBL:AL139164) small hypothetical protein from Streptomyces coelicolor (75 aa) fasta scores%3B opt: 114%2C z-score: 155.1%2C E(): 0.35%2C 43.1%25 identity in 51 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCC61A.24c;product=hypothetical protein;protein_id=NP_626937.1;transl_table=11
NC_003888.3	RefSeq	gene	2946094	2946828	.	-	.	ID=gene2714;Dbxref=GeneID:1098138;Name=SCC61A.25c;gbkey=Gene;gene=SCC61A.25c;gene_biotype=protein_coding;gene_synonym=SCC61A.25c;locus_tag=SCO2704
NC_003888.3	RefSeq	CDS	2946094	2946828	.	-	0	ID=cds2667;Parent=gene2714;Dbxref=Genbank:NP_626938.1,GeneID:1098138;Name=NP_626938.1;Note=SCC61A.25c%2C possible hypothetical protein%2C len: 244aa%3B contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;gene=SCC61A.25c;product=hypothetical protein;protein_id=NP_626938.1;transl_table=11
NC_003888.3	RefSeq	gene	2947104	2947370	.	-	.	ID=gene2715;Dbxref=GeneID:1098139;Name=SCC61A.26c;gbkey=Gene;gene=SCC61A.26c;gene_biotype=protein_coding;gene_synonym=SCC61A.26c;locus_tag=SCO2705
NC_003888.3	RefSeq	CDS	2947104	2947370	.	-	0	ID=cds2668;Parent=gene2715;Dbxref=Genbank:NP_626939.1,GeneID:1098139;Name=NP_626939.1;Note=SCC61A.26c%2C possible membrane protein%2C len: 88 aa%3B similar to others from Streptomyces coelicolor eg. TR:CAB75306 (EMBL:AL139164) small hypothetical protein (75 aa) fasta scores%3B opt: 330%2C z-score: 389.5%2C E(): 3.1e-14%2C 72.1%25 identity in 68 aa overlap and neighbouring CDS SCC61A.20. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCC61A.26c;product=hypothetical protein;protein_id=NP_626939.1;transl_table=11
NC_003888.3	RefSeq	gene	2947584	2948894	.	+	.	ID=gene2716;Dbxref=GeneID:1098140;Name=SCC61A.27;gbkey=Gene;gene=SCC61A.27;gene_biotype=protein_coding;gene_synonym=SCC61A.27;locus_tag=SCO2706
NC_003888.3	RefSeq	CDS	2947584	2948894	.	+	0	ID=cds2669;Parent=gene2716;Dbxref=Genbank:NP_626940.1,GeneID:1098140;Name=NP_626940.1;Note=SCC61A.27%2C possible transferase%2C len: 436 aa%3B similar to many proposed to be involved in LPS biosynthesis e.g. SW:LPSB_RHIME (EMBL:AF193023) LpsB from lipopolysaccharide biosynthesis cluster of Rhizobium meliloti. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1. Also contains a TTA encoded leucine close to the N-terminus%2C possible target for bldA regulation;gbkey=CDS;gene=SCC61A.27;product=transferase;protein_id=NP_626940.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2947605	2947607	.	+	.	ID=id3376;Dbxref=GeneID:1098140;Note=TTA leucine codon translated in CDS SCC61A.26 and a possible target for bldA regulation.;gbkey=misc_feature;gene=SCC61A.27
NC_003888.3	RefSeq	sequence_feature	2948238	2948672	.	+	.	ID=id3377;Dbxref=GeneID:1098140;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 63.90%2C E-value 3.9e-17;gbkey=misc_feature;gene=SCC61A.27
NC_003888.3	RefSeq	gene	2948891	2950345	.	+	.	ID=gene2717;Dbxref=GeneID:1098141;Name=SCC61A.28;gbkey=Gene;gene=SCC61A.28;gene_biotype=protein_coding;gene_synonym=SCC61A.28;locus_tag=SCO2707
NC_003888.3	RefSeq	CDS	2948891	2950345	.	+	0	ID=cds2670;Parent=gene2717;Dbxref=Genbank:NP_626941.1,GeneID:1098141;Name=NP_626941.1;Note=SCC61A.28%2C possible transferase (membrane-associated)%2C len: 484 aa%3B similar to many proposed to be involved in LPS biosynthesis e.g. SW:P71241 (WCAJ_ECOLI) colanic biosynthesis UDP-glucose lipid carrier transferase from Escherichia coli (464 aa) fasta scores%3B opt: 493%2C z-score: 540.1%2C E(): 1.3e-22%2C 30.9%25 identity in 376 aa overlap. Contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=SCC61A.28;product=transferase;protein_id=NP_626941.1;transl_table=11
NC_003888.3	RefSeq	gene	2950351	2951667	.	+	.	ID=gene2718;Dbxref=GeneID:1098142;Name=SCC61A.29;gbkey=Gene;gene=SCC61A.29;gene_biotype=protein_coding;gene_synonym=SCC61A.29;locus_tag=SCO2708
NC_003888.3	RefSeq	CDS	2950351	2951667	.	+	0	ID=cds2671;Parent=gene2718;Dbxref=Genbank:NP_626942.1,GeneID:1098142;Name=NP_626942.1;Note=SCC61A.29%2C possible integral membrane protein%2C len: 438aa%3B weakly similar to TR:Q51524 (EMBL:X83916) PilO%2C required for glycosylation of Pseudomonas aeruginosa 1244 pilin (461 aa) fasta scores%3B opt: 165%2C z-score: 184.2%2C E(): 0.0085%2C 25.7%25 identity in 439 aa overlap.;gbkey=CDS;gene=SCC61A.29;product=hypothetical protein;protein_id=NP_626942.1;transl_table=11
NC_003888.3	RefSeq	gene	2952033	2953604	.	+	.	ID=gene2719;Dbxref=GeneID:1098143;Name=SCC61A.30;gbkey=Gene;gene=SCC61A.30;gene_biotype=protein_coding;gene_synonym=SCC61A.30;locus_tag=SCO2709
NC_003888.3	RefSeq	CDS	2952033	2953604	.	+	0	ID=cds2672;Parent=gene2719;Dbxref=Genbank:NP_626943.1,GeneID:1098143;Name=NP_626943.1;Note=SCC61A.30%2C possible integral membrane protein%2C len: 523aa%3B similar to many proposed virulence factors eg. SW:P37169 (MVIN_SALTY) virulence factor MviN from Salmonella typhimurium (524 aa) fasta scores%3B opt: 475%2C z-score: 495.1%2C E(): 4e-20%2C 28.8%25 identity in 423 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC61A.30;product=hypothetical protein;protein_id=NP_626943.1;transl_table=11
NC_003888.3	RefSeq	gene	2953648	2954337	.	+	.	ID=gene2720;Dbxref=GeneID:1098144;Name=SCC61A.31;gbkey=Gene;gene=SCC61A.31;gene_biotype=protein_coding;gene_synonym=SCC61A.31;locus_tag=SCO2710
NC_003888.3	RefSeq	CDS	2953648	2954337	.	+	0	ID=cds2673;Parent=gene2720;Dbxref=Genbank:NP_626944.1,GeneID:1098144;Name=NP_626944.1;Note=SCC61A.31%2C possible polysaccharide deacetylase%2C len: 229 aa%3B weakly similar to many e.g. TR:Q9XDJ5 (EMBL:AF048749)  deacetylase from Bacteroides fragilis (259 aa) fasta scores%3B opt: 135%2C z-score: 169.7%2C E(): 0.054%2C 22.6%25 identity in 137 aa overlap. Contains Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase.;gbkey=CDS;gene=SCC61A.31;product=polysaccharide deacetylase;protein_id=NP_626944.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2953798	2954271	.	+	.	ID=id3378;Dbxref=GeneID:1098144;Note=Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase%2C score 38.00%2C E-value 6.7e-08;gbkey=misc_feature;gene=SCC61A.31
NC_003888.3	RefSeq	gene	2954348	2955550	.	+	.	ID=gene2721;Dbxref=GeneID:1098145;Name=SCC61A.32;gbkey=Gene;gene=SCC61A.32;gene_biotype=protein_coding;gene_synonym=SCC61A.32;locus_tag=SCO2711
NC_003888.3	RefSeq	CDS	2954348	2955550	.	+	0	ID=cds2674;Parent=gene2721;Dbxref=Genbank:NP_626945.1,GeneID:1098145;Name=NP_626945.1;Note=SCC61A.32%2C possible glycosyl transferase%2C len: 400 aa%3B weakly similar to others proposed to be involved in LPS biosynthesis e.g. TR:AAF23993 (EMBL:AF035937) from Pseudomonas aeruginosa (383 aa) fasta scores%3B opt: 381%2C z-score: 364.0%2C E(): 8.2e-13%2C 28.6%25 identity in 392 aa overlap. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1.;gbkey=CDS;gene=SCC61A.32;product=glycosyl transferase;protein_id=NP_626945.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2954879	2955247	.	+	.	ID=id3379;Dbxref=GeneID:1098145;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 29.10%2C E-value 3.6e-07;gbkey=misc_feature;gene=SCC61A.32
NC_003888.3	RefSeq	gene	2955547	2956266	.	+	.	ID=gene2722;Dbxref=GeneID:1098146;Name=SCC61A.33;gbkey=Gene;gene=SCC61A.33;gene_biotype=protein_coding;gene_synonym=SCC61A.33;locus_tag=SCO2712
NC_003888.3	RefSeq	CDS	2955547	2956266	.	+	0	ID=cds2675;Parent=gene2722;Dbxref=Genbank:NP_626946.1,GeneID:1098146;Name=NP_626946.1;Note=SCC61A.33%2C possible membrane protein%2C len: 239aa%3B weakly similar to TR:Q9X4U6 (EMBL:AF118389) from cps locus of Streptococcus suis serotype 2 (229 aa) fasta scores%3B opt: 161%2C z-score: 172.0%2C E(): 0.04%2C 28.4%25 identity in 176 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCC61A.33;product=hypothetical protein;protein_id=NP_626946.1;transl_table=11
NC_003888.3	RefSeq	gene	2956263	2957411	.	+	.	ID=gene2723;Dbxref=GeneID:1098147;Name=SCC61A.34;gbkey=Gene;gene=SCC61A.34;gene_biotype=protein_coding;gene_synonym=SCC61A.34;locus_tag=SCO2713
NC_003888.3	RefSeq	CDS	2956263	2957411	.	+	0	ID=cds2676;Parent=gene2723;Dbxref=Genbank:NP_626947.1,GeneID:1098147;Name=NP_626947.1;Note=SCC61A.34%2C unknown%2C len: 382aa;gbkey=CDS;gene=SCC61A.34;product=hypothetical protein;protein_id=NP_626947.1;transl_table=11
NC_003888.3	RefSeq	gene	2957449	2958636	.	-	.	ID=gene2724;Dbxref=GeneID:1098148;Name=SCC61A.35;gbkey=Gene;gene=SCC61A.35;gene_biotype=protein_coding;gene_synonym=SCC61A.35;locus_tag=SCO2714
NC_003888.3	RefSeq	CDS	2957449	2958636	.	-	0	ID=cds2677;Parent=gene2724;Dbxref=Genbank:NP_626948.1,GeneID:1098148;Name=NP_626948.1;Note=SCC61A.35%2C possible hypothetical protein%2C len: 395aa%3B contains a possible non-cleavable N-terminal signal sequence.;gbkey=CDS;gene=SCC61A.35;product=hypothetical protein;protein_id=NP_626948.1;transl_table=11
NC_003888.3	RefSeq	gene	2958781	2960079	.	+	.	ID=gene2725;Dbxref=GeneID:1098149;Name=SCC61A.36;gbkey=Gene;gene=SCC61A.36;gene_biotype=protein_coding;gene_synonym=SCC61A.36;locus_tag=SCO2715
NC_003888.3	RefSeq	CDS	2958781	2960079	.	+	0	ID=cds2678;Parent=gene2725;Dbxref=Genbank:NP_626949.1,GeneID:1098149;Name=NP_626949.1;Note=SCC61A.36%2C unknown%2C len: 432aa;gbkey=CDS;gene=SCC61A.36;product=hypothetical protein;protein_id=NP_626949.1;transl_table=11
NC_003888.3	RefSeq	gene	2960170	2960928	.	-	.	ID=gene2726;Dbxref=GeneID:1098150;Name=SCC46.01c;gbkey=Gene;gene=SCC46.01c;gene_biotype=protein_coding;gene_synonym=SCC46.01c,SCC61A.37c;locus_tag=SCO2716
NC_003888.3	RefSeq	CDS	2960170	2960928	.	-	0	ID=cds2679;Parent=gene2726;Dbxref=Genbank:NP_733581.1,GeneID:1098150;Name=NP_733581.1;Note=SCC46.01c%2C possible hypothetical protein%2C len: > 171 aa%3B similar to TR:Q9X7U2 (EMBL:AL049863) Streptomyces coelicolor hypothetical 22.7 kD protein SC5H1.35c%2C 237 aa%3B fasta scores: opt: 456 z-score: 458.0 E(): 4.3e-18%3B 42.6%25 identity in 176 aa overlap. Contains possible N-terminal region signal peptide sequence~SCC61A.37c%2C possible hypothetical protein (fragment)%2C len: >114aa%3B forms to C-terminus of TR:CAB75305 (EMBL:AL139164) hypothetical protein on an overlapping cosmid. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCC46.01c;product=hypothetical protein;protein_id=NP_733581.1;transl_table=11
NC_003888.3	RefSeq	gene	2961104	2961331	.	-	.	ID=gene2727;Dbxref=GeneID:1098151;Name=SCC46.02c;gbkey=Gene;gene=SCC46.02c;gene_biotype=protein_coding;gene_synonym=SCC46.02c;locus_tag=SCO2717
NC_003888.3	RefSeq	CDS	2961104	2961331	.	-	0	ID=cds2680;Parent=gene2727;Dbxref=Genbank:NP_626950.1,GeneID:1098151;Name=NP_626950.1;Note=SCC46.02c%2C possible small membrane protein%2C len: 75 aa%3B similar to TR:Q9X9Z2 (EMBL:AL079332) Streptomyces coelicolor small hypothetical protein SCI5.08c%2C 82 aa%3B fasta scores: opt: 283 z-score: 339.8 E(): 1.6e-11%3B 58.1%25 identity in 74 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC46.02c;product=small membrane protein;protein_id=NP_626950.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2961340	2961345	.	-	.	ID=id3380;gbkey=RBS
NC_003888.3	RefSeq	gene	2961619	2962014	.	-	.	ID=gene2728;Dbxref=GeneID:1098152;Name=SCC46.03c;gbkey=Gene;gene=SCC46.03c;gene_biotype=protein_coding;gene_synonym=SCC46.03c;locus_tag=SCO2718
NC_003888.3	RefSeq	CDS	2961619	2962014	.	-	0	ID=cds2681;Parent=gene2728;Dbxref=Genbank:NP_626951.1,GeneID:1098152;Name=NP_626951.1;Note=SCC46.03c%2C hypothetical protein%2C len: 131 aa%3B similar to S. coelicolor unknown protein SCC46.04%2C 147 aa%3B fasta scores: opt: 626 z-score: 635.3 E(): 6.2e-30%3B 69.2%25 identity in 130 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC46.03c;product=hypothetical protein;protein_id=NP_626951.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2962224	2962227	.	+	.	ID=id3381;gbkey=RBS
NC_003888.3	RefSeq	gene	2962235	2962678	.	+	.	ID=gene2729;Dbxref=GeneID:1098153;Name=SCC46.04;gbkey=Gene;gene=SCC46.04;gene_biotype=protein_coding;gene_synonym=SCC46.04;locus_tag=SCO2719
NC_003888.3	RefSeq	CDS	2962235	2962678	.	+	0	ID=cds2682;Parent=gene2729;Dbxref=Genbank:NP_626952.1,GeneID:1098153;Name=NP_626952.1;Note=SCC46.04%2C hypothetical protein%2C len: 147 aa%3B similar to S. coelicolor unknwon protein SCC46.03c%2C 131 aa%3B fasta scores: opt: 626 z-score: 650.1 E(): 9.3e-31%3B 69.2%25 identity in 130 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC46.04;product=hypothetical protein;protein_id=NP_626952.1;transl_table=11
NC_003888.3	RefSeq	gene	2962767	2964695	.	-	.	ID=gene2730;Dbxref=GeneID:1098154;Name=SCC46.05c;gbkey=Gene;gene=SCC46.05c;gene_biotype=protein_coding;gene_synonym=SCC46.05c;locus_tag=SCO2720
NC_003888.3	RefSeq	CDS	2962767	2964695	.	-	0	ID=cds2683;Parent=gene2730;Dbxref=Genbank:NP_626953.1,GeneID:1098154;Name=NP_626953.1;Note=SCC46.05c%2C possible long-chain fatty acid ligase%2C len: 642 aa%3B similar to TR:Q9ZBW6 (EMBL:AL034443) Streptomyces coelicolor  long-chain-fatty-acid-CoA ligase SC4B5.02c%2C 608 aa%3B fasta scores: opt: 2039 z-score: 2214.0 E(): 0%3B 51.4%25 identity in 607 aa overlap and to SW:LCFB_HUMAN (EMBL:D10040) Homo sapiens long-chain-fatty-acid-CoA ligase 2 (EC 6.2.1.3) FacL2%2C 698 aa%3B fasta scores: opt: 471 z-score: 511.5 E(): 4.5e-21%3B 27.8%25 identity in 615 aa overlap. Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and match to Prosite entry PS00455  AMP-binding domain signature;gbkey=CDS;gene=SCC46.05c;product=long-chain fatty acid ligase;protein_id=NP_626953.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2963097	2964464	.	-	.	ID=id3382;Dbxref=GeneID:1098154;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score -59.60%2C E-value 4.3e-12;gbkey=misc_feature;gene=SCC46.05c
NC_003888.3	RefSeq	sequence_feature	2964021	2964056	.	-	.	ID=id3383;Dbxref=GeneID:1098154;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SCC46.05c
NC_003888.3	RefSeq	ribosome_entry_site	2964701	2964704	.	-	.	ID=id3384;gbkey=RBS
NC_003888.3	RefSeq	gene	2964860	2966458	.	-	.	ID=gene2731;Dbxref=GeneID:1098155;Name=SCC46.06c;gbkey=Gene;gene=SCC46.06c;gene_biotype=protein_coding;gene_synonym=SCC46.06c;locus_tag=SCO2721
NC_003888.3	RefSeq	CDS	2964860	2966458	.	-	0	ID=cds2684;Parent=gene2731;Dbxref=Genbank:NP_626954.1,GeneID:1098155;Name=NP_626954.1;Note=SCC46.06c%2C possible lipoprotein%2C len: 532 aa%3B similar to various hypothetical proteins%2C e.g. SW:YFBK_ECOLI (EMBL:AE000317) Escherichia coli hypothetical 63.6 kD protein in ElaD-NuoN intergenic region%2C YfbK%2C 575 aa%3B fasta scores: opt: 778 z-score: 815.2 E(): 0%3B 32.6%25 identity in 482 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SCC46.06c;product=lipoprotein;protein_id=NP_626954.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2966363	2966395	.	-	.	ID=id3385;Dbxref=GeneID:1098155;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCC46.06c
NC_003888.3	RefSeq	gene	2966690	2967589	.	-	.	ID=gene2732;Dbxref=GeneID:1098156;Name=SCC46.07c;gbkey=Gene;gene=SCC46.07c;gene_biotype=protein_coding;gene_synonym=SCC46.07c;locus_tag=SCO2722
NC_003888.3	RefSeq	CDS	2966690	2967589	.	-	0	ID=cds2685;Parent=gene2732;Dbxref=Genbank:NP_626955.1,GeneID:1098156;Name=NP_626955.1;Note=SCC46.07c%2C possible integral membrane protein%2C len: 299 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC46.07c;product=hypothetical protein;protein_id=NP_626955.1;transl_table=11
NC_003888.3	RefSeq	gene	2967586	2970186	.	-	.	ID=gene2733;Dbxref=GeneID:1098157;Name=SCC46.08c;gbkey=Gene;gene=SCC46.08c;gene_biotype=protein_coding;gene_synonym=SCC46.08c;locus_tag=SCO2723
NC_003888.3	RefSeq	CDS	2967586	2970186	.	-	0	ID=cds2686;Parent=gene2733;Dbxref=Genbank:NP_626956.1,GeneID:1098157;Name=NP_626956.1;Note=SCC46.08c%2C probable ABC transporter ATP-binding protein%2C len: 866 aa%3B C-terminal region similar to SW:YHCH_BACSU (EMBL:X96983) Bacillus subtilis hypothetical ABC transporter ATP-binding protein 2 in GlpD-CspB intergenic region%2C YhcH%2C 305 aa%3B fasta scores: opt: 597 z-score: 577.6 E(): 9.3e-25%3B 36.6%25 identity in 303 aa overlap and to SW:BCRA_BACLI (EMBL:L20573) Bacillus licheniformis bacitracin transport ATP-binding protein BcrA%2C 306 aa%3B fasta scores: opt: 581 z-score: 562.3 E(): 6.6e-24%3B 38.8%25 identity in 304 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC46.08c;product=ABC transporter ATP-binding protein;protein_id=NP_626956.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2967596	2967600	.	-	.	ID=id3386;Dbxref=GeneID:1098157;gbkey=RBS;gene=SCC46.08c
NC_003888.3	RefSeq	sequence_feature	2967874	2968410	.	-	.	ID=id3387;Dbxref=GeneID:1098157;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 192.80%2C E-value 5.3e-54;gbkey=misc_feature;gene=SCC46.08c
NC_003888.3	RefSeq	sequence_feature	2968057	2968101	.	-	.	ID=id3388;Dbxref=GeneID:1098157;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCC46.08c
NC_003888.3	RefSeq	sequence_feature	2968366	2968389	.	-	.	ID=id3389;Dbxref=GeneID:1098157;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC46.08c
NC_003888.3	RefSeq	gene	2970454	2971884	.	-	.	ID=gene2734;Dbxref=GeneID:1098158;Name=SCC46.09c;gbkey=Gene;gene=SCC46.09c;gene_biotype=protein_coding;gene_synonym=SCC46.09c;locus_tag=SCO2724
NC_003888.3	RefSeq	CDS	2970454	2971884	.	-	0	ID=cds2687;Parent=gene2734;Dbxref=Genbank:NP_626957.1,GeneID:1098158;Name=NP_626957.1;Note=SCC46.09c%2C possible amino acid transporter%2C len: 476 aa%3B similar to TR:BAA87325 (EMBL:AB020520) Rattus norvegicus Y+L amino acid transporter 1%2C RT+Lat1%2C 512 aa%3B fasta scores: opt: 354 z-score: 394.6 E(): 1.5e-14%3B 26.3%25 identity in 460 aa overlap. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC46.09c;product=amino acid transporter;protein_id=NP_626957.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2970520	2971800	.	-	.	ID=id3390;Dbxref=GeneID:1098158;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -250.50%2C E-value 0.0022;gbkey=misc_feature;gene=SCC46.09c
NC_003888.3	RefSeq	sequence_feature	2972229	2974646	.	+	.	ID=id3391;Note=previously sequenced fragment (EMBL:L48550);gbkey=misc_feature
NC_003888.3	RefSeq	gene	2972229	2973086	.	+	.	ID=gene2735;Dbxref=GeneID:1098159;Name=SCC46.10;gbkey=Gene;gene=SCC46.10;gene_biotype=protein_coding;gene_synonym=SCC46.10;locus_tag=SCO2725
NC_003888.3	RefSeq	CDS	2972229	2973086	.	+	0	ID=cds2688;Parent=gene2735;Dbxref=Genbank:NP_626958.1,GeneID:1098159;Name=NP_626958.1;Note=SCC46.10%2C possible lipoprotein%2C len: 285 aa%3B identical to previously sequenced TR:Q53936 (EMBL:L48550) Streptomyces coelicolor unknown protein downstream of msdA. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCC46.10;product=lipoprotein;protein_id=NP_626958.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2972265	2972297	.	+	.	ID=id3392;Dbxref=GeneID:1098159;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCC46.10
NC_003888.3	RefSeq	gene	2973144	2974646	.	-	.	ID=gene2736;Dbxref=GeneID:1098160;Name=msdA;gbkey=Gene;gene=msdA;gene_biotype=protein_coding;gene_synonym=msdA,SCC46.11c;locus_tag=SCO2726
NC_003888.3	RefSeq	CDS	2973144	2974646	.	-	0	ID=cds2689;Parent=gene2736;Dbxref=Genbank:NP_626959.1,GeneID:1098160;Name=NP_626959.1;Note=SCC46.11c%2C msdA%2C methylmalonic acid semialdehyde dehydrogenase%2C 500 aa%3B identical to previously sequenced TR:Q53935 (EMBL:L48550) Streptomyces coelicolor methylmalonic acid semialdehyde dehydrogenase MsdA and highly similar to SW:MMSA_PSEAE (EMBL:M84911) Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] (EC 1.2.1.27) MmsA%2C 496 aa%3B fasta scores: opt: 1652 z-score: 1799.5 E(): 0%3B 48.0%25 identity in 490 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family and match to Prosite entry PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=CDS;gene=msdA;product=methylmalonic acid semialdehyde dehydrogenase;protein_id=NP_626959.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2973201	2974613	.	-	.	ID=id3393;Dbxref=GeneID:1098160;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 530.10%2C E-value 1.6e-155;gbkey=misc_feature;gene=msdA
NC_003888.3	RefSeq	sequence_feature	2973789	2973824	.	-	.	ID=id3394;Dbxref=GeneID:1098160;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=msdA
NC_003888.3	RefSeq	ribosome_entry_site	2974656	2974660	.	-	.	ID=id3395;gbkey=RBS
NC_003888.3	RefSeq	gene	2974661	2975038	.	-	.	ID=gene2737;Dbxref=GeneID:1098161;Name=SCC46.12c;gbkey=Gene;gene=SCC46.12c;gene_biotype=protein_coding;gene_synonym=SCC46.12c;locus_tag=SCO2727
NC_003888.3	RefSeq	CDS	2974661	2975038	.	-	0	ID=cds2690;Parent=gene2737;Dbxref=Genbank:NP_626960.1,GeneID:1098161;Name=NP_626960.1;Note=SCC46.12c%2C improbable CDS predicted by HMM%2C len: 125 aa;gbkey=CDS;gene=SCC46.12c;product=hypothetical protein;protein_id=NP_626960.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2975046	2975051	.	-	.	ID=id3396;gbkey=RBS
NC_003888.3	RefSeq	gene	2975219	2975617	.	+	.	ID=gene2738;Dbxref=GeneID:1098162;Name=SCC46.13;gbkey=Gene;gene=SCC46.13;gene_biotype=protein_coding;gene_synonym=SCC46.13;locus_tag=SCO2728
NC_003888.3	RefSeq	CDS	2975219	2975617	.	+	0	ID=cds2691;Parent=gene2738;Dbxref=Genbank:NP_626961.1,GeneID:1098162;Name=NP_626961.1;Note=SCC46.13%2C unknown%2C len: 132 aa;gbkey=CDS;gene=SCC46.13;product=hypothetical protein;protein_id=NP_626961.1;transl_table=11
NC_003888.3	RefSeq	gene	2975704	2976312	.	+	.	ID=gene2739;Dbxref=GeneID:1098163;Name=SCC46.14;gbkey=Gene;gene=SCC46.14;gene_biotype=protein_coding;gene_synonym=SCC46.14;locus_tag=SCO2729
NC_003888.3	RefSeq	CDS	2975704	2976312	.	+	0	ID=cds2692;Parent=gene2739;Dbxref=Genbank:NP_626962.1,GeneID:1098163;Name=NP_626962.1;Note=SCC46.14%2C possible acetyltransferase%2C len: 202 aa%3B similar to SW:ATDA_ECOLI (EMBL:D25276) Escherichia coli spermidine N1-acetyltransferase (EC 2.3.1.57) SpeG%2C 185 aa%3B fasta scores: opt: 236 z-score: 303.2 E(): 1.8e-09%3B 27.6%25 identity in 170 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCC46.14;product=acetyltransferase;protein_id=NP_626962.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2975758	2976165	.	+	.	ID=id3397;Dbxref=GeneID:1098163;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 43.50%2C E-value 4.7e-09;gbkey=misc_feature;gene=SCC46.14
NC_003888.3	RefSeq	gene	2976325	2976630	.	+	.	ID=gene2740;Dbxref=GeneID:1098164;Name=SCC46.15;gbkey=Gene;gene=SCC46.15;gene_biotype=protein_coding;gene_synonym=SCC46.15,SCC57A.01;locus_tag=SCO2730
NC_003888.3	RefSeq	CDS	2976325	2976630	.	+	0	ID=cds2693;Parent=gene2740;Dbxref=Genbank:NP_733582.1,GeneID:1098164;Name=NP_733582.1;Note=SCC57A.01%2C possible regulator%2C partial CDS%2C len: > 47 aa. Similar to the C-terminus of Streptomyces coelicolor TR:CAB61163 (EMBL:AL132973) TetR-family transcriptional regulator (194 aa)%2C fasta scores opt: 85 z-score: 133.1 E():5 58.1%25 identity in 31 aa overlap.~SCC46.15%2C possible regulator (fragment)%2C len: >89 aa%3B N-terminal region of TR:CAB66269 (EMBL:AL136519) Streptomyces coelicolor  regulator (fragment) SCC57A.01.;gbkey=CDS;gene=SCC46.15;product=regulator;protein_id=NP_733582.1;transl_table=11
NC_003888.3	RefSeq	gene	2976666	2978948	.	+	.	ID=gene2741;Dbxref=GeneID:1098165;Name=SCC57A.02;gbkey=Gene;gene=SCC57A.02;gene_biotype=protein_coding;gene_synonym=SCC57A.02;locus_tag=SCO2731
NC_003888.3	RefSeq	CDS	2976666	2978948	.	+	0	ID=cds2694;Parent=gene2741;Dbxref=Genbank:NP_626963.1,GeneID:1098165;Name=NP_626963.1;Note=SCC57A.02%2C probable cation transporting P-type ATPase%2C len: 760 aa. Highly similar to many cation transporters e.g. Mycobacterium leprae SW:CTPB_MYCLE(EMBL:Z46257) cation-transporting P-type ATPase B (EC 3.6.1.-) (750 aa)%2C fasta scores opt: 1955 z-score: 1929.1 E():0 49.5%25 identity in 750 aa overlap and Streptomyces coelicolor (EMBL:AL136149) SCM2.13c (762 aa)%2C fasta scores opt: 2552 z-score: 2109.2 E():0 55.8%25 identity in 749 aa overlap. Contains Prosite hits to PS00154 E1-E2 ATPases phosphorylation site%2C PS01229 Hypothetical cof family signature 2 and PS01047 Heavy-metal-associated domain. Also contains Pfam hits to PF00122 E1-E2_ATPase%2C E1-E2 ATPase and PF00403 HMA%2C Heavy-metal-associated domain%2C as well as%2C several possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC57A.02;product=cation-transporting P-type ATPase;protein_id=NP_626963.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2976747	2976833	.	+	.	ID=id3398;Dbxref=GeneID:1098165;Note=Pfam match to entry PF00403 HMA%2C Heavy-metal-associated domain%2C score 40.00%2C E-value 2.1e-09;gbkey=misc_feature;gene=SCC57A.02
NC_003888.3	RefSeq	sequence_feature	2976747	2976830	.	+	.	ID=id3399;Dbxref=GeneID:1098165;Note=PS01047 Heavy-metal-associated domain;gbkey=misc_feature;gene=SCC57A.02
NC_003888.3	RefSeq	sequence_feature	2977359	2978924	.	+	.	ID=id3400;Dbxref=GeneID:1098165;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 644.90%2C E-value 4.5e-190;gbkey=misc_feature;gene=SCC57A.02
NC_003888.3	RefSeq	sequence_feature	2978049	2978069	.	+	.	ID=id3401;Dbxref=GeneID:1098165;Note=PS00154 E1-E2 ATPases phosphorylation site;gbkey=misc_feature;gene=SCC57A.02
NC_003888.3	RefSeq	gene	2978987	2979586	.	-	.	ID=gene2742;Dbxref=GeneID:1098166;Name=SCC57A.03c;gbkey=Gene;gene=SCC57A.03c;gene_biotype=protein_coding;gene_synonym=SCC57A.03c;locus_tag=SCO2732
NC_003888.3	RefSeq	CDS	2978987	2979586	.	-	0	ID=cds2695;Parent=gene2742;Dbxref=Genbank:NP_626964.1,GeneID:1098166;Name=NP_626964.1;Note=SCC57A.03c%2C possible integral-membrane protein%2C len: 199 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC57A.03c;product=hypothetical protein;protein_id=NP_626964.1;transl_table=11
NC_003888.3	RefSeq	gene	2979583	2980422	.	-	.	ID=gene2743;Dbxref=GeneID:1098167;Name=SCC57A.04c;gbkey=Gene;gene=SCC57A.04c;gene_biotype=protein_coding;gene_synonym=SCC57A.04c;locus_tag=SCO2733
NC_003888.3	RefSeq	CDS	2979583	2980422	.	-	0	ID=cds2696;Parent=gene2743;Dbxref=Genbank:NP_626965.1,GeneID:1098167;Name=NP_626965.1;Note=SCC57A.04c%2C unknown%2C len: 279 aa. Similar to several proteins of unconfirmed function including: Streptomyces coelicolor TR:CAB58282(EMBL:AL121850) conserved hypothetical protein SCC78.01C (fragment)%2C fasta scores opt: 274 z-score: 319.9 E(): 2e-10 35.3%25 identity in 235 aa overlap and Streptomyces nogalater TR:AAF01810(EMBL:AF187532)  hydroxylase (275 aa)%2C fasta scores opt: 384 z-score: 443.4 E(): 2.6e-17 34.9%25 identity in 281 aa overlap.;gbkey=CDS;gene=SCC57A.04c;product=hypothetical protein;protein_id=NP_626965.1;transl_table=11
NC_003888.3	RefSeq	gene	2980558	2981592	.	+	.	ID=gene2744;Dbxref=GeneID:1098168;Name=SCC57A.05;gbkey=Gene;gene=SCC57A.05;gene_biotype=protein_coding;gene_synonym=SCC57A.05;locus_tag=SCO2734
NC_003888.3	RefSeq	CDS	2980558	2981592	.	+	0	ID=cds2697;Parent=gene2744;Dbxref=Genbank:NP_626966.1,GeneID:1098168;Name=NP_626966.1;Note=SCC57A.05%2C possible LysR-family transcriptional regulator%2C len: 344 aa. Similar to several other regulators including: Streptomyces lividans TR:Q9X9S5 (EMBL:Y18818) transcriptional regulator (LysR-family)%2C found adjacent to the actinorhodin biosynthetic cluster (307 aa)%2C fasta scores opt: 275 z-score: 303.4 E(): 1.6e-09 31.3%25 identity in 336 aa overlap. Also similar to Streptomyces coelicolor regulators: TR:Q9X9U9 (EMBL:Y18817) transcriptional regulator of LysR family (307 aa)%2C fasta scores opt: 274 z-score: 302.6 E(): 1.8e-09 31.3%25 identity in 336 aa overlap and (EMBL:AL136058) LysR-family transcriptional regulator%2C SCE20.14 (297 aa)%2C fasta scores opt: 509 z-score: 460.1 E(): 3.3e-20 37.5%25 identity in 323 aa overlap. Contains a Prosite hit to PS00044 Bacterial regulatory proteins%2C lysR family signature and a Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family with the  helix-turn-helix motif situated between residues 16..37 (+2.63 SD).;gbkey=CDS;gene=SCC57A.05;product=LysR family transcriptional regulator;protein_id=NP_626966.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2980564	2980992	.	+	.	ID=id3402;Dbxref=GeneID:1098168;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 93.40%2C E-value 4.4e-24;gbkey=misc_feature;gene=SCC57A.05
NC_003888.3	RefSeq	sequence_feature	2980606	2980698	.	+	.	ID=id3403;Dbxref=GeneID:1098168;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCC57A.05
NC_003888.3	RefSeq	gene	2981644	2982126	.	+	.	ID=gene2745;Dbxref=GeneID:1098169;Name=SCC57A.06;gbkey=Gene;gene=SCC57A.06;gene_biotype=protein_coding;gene_synonym=SCC57A.06;locus_tag=SCO2735
NC_003888.3	RefSeq	CDS	2981644	2982126	.	+	0	ID=cds2698;Parent=gene2745;Dbxref=Genbank:NP_626967.1,GeneID:1098169;Name=NP_626967.1;Note=SCC57A.06%2C possible integral membrane protein%2C len: 160 aa. Similar to Streptomyces coelicolor TR:O69999(EMBL:AL022374)  integral membrane protein SC5B8.13 (174 aa)%2C fasta scores opt: 186 z-score: 231.3 E(): 1.7e-05 34.5%25 identity in 148 aa overlap. Contains possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC57A.06;product=hypothetical protein;protein_id=NP_626967.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2982579	2984678	.	-	.	ID=id3404;Note=shares 100 %25 identity with EMBL:AF181118 Streptomyces coelicolor citrate synthase (citA) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	2982769	2984058	.	-	.	ID=gene2746;Dbxref=GeneID:1098170;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;gene_synonym=citA;locus_tag=SCO2736
NC_003888.3	RefSeq	CDS	2982769	2984058	.	-	0	ID=cds2699;Parent=gene2746;Dbxref=Genbank:NP_626968.1,GeneID:1098170;Name=NP_626968.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=NP_626968.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2982826	2983923	.	-	.	ID=id3405;Dbxref=GeneID:1098170;Note=Pfam match to entry PF00285 citrate_synt%2C Citrate synthase%2C score 660.60%2C E-value 2.2e-207;gbkey=misc_feature;gene=gltA
NC_003888.3	RefSeq	sequence_feature	2983111	2983149	.	-	.	ID=id3406;Dbxref=GeneID:1098170;Note=PS00480 Citrate synthase signature;gbkey=misc_feature;gene=gltA
NC_003888.3	RefSeq	gene	2984296	2986557	.	-	.	ID=gene2747;Dbxref=GeneID:1098171;Name=SCC57A.08c;gbkey=Gene;gene=SCC57A.08c;gene_biotype=protein_coding;gene_synonym=SCC57A.08c;locus_tag=SCO2737
NC_003888.3	RefSeq	CDS	2984296	2986557	.	-	0	ID=cds2700;Parent=gene2747;Dbxref=Genbank:NP_626969.1,GeneID:1098171;Name=NP_626969.1;Note=SCC57A.08c%2C possible deoxyribonuclease%2C len: 753 aa. Similar to several including: Chlamydia trachomatis TR:O84036(EMBL:AE001278) exodeoxyribonuclease V%2C alpha subunit (746 aa)%2C fasta scores opt:1007 z-score: 1095.8 E():0 36.8%25 identity in 740 aa overlap and to the C-terminus of Escherichia coli SW:EX5A_ECOLI(EMBL:X04582) exodeoxyribonuclease V (EC 3.1.11.5) RecD (608 aa)%2C fasta scores opt: 225 z-score: 245.0 E(): 2.9e-06 29.3%25 identity in 460 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCC57A.08c;product=deoxyribonuclease;protein_id=NP_626969.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2985418	2985441	.	-	.	ID=id3407;Dbxref=GeneID:1098171;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCC57A.08c
NC_003888.3	RefSeq	gene	2986705	2986902	.	-	.	ID=gene2748;Dbxref=GeneID:1098172;Name=SCC57A.09c;gbkey=Gene;gene=SCC57A.09c;gene_biotype=protein_coding;gene_synonym=SCC57A.09c;locus_tag=SCO2738
NC_003888.3	RefSeq	CDS	2986705	2986902	.	-	0	ID=cds2701;Parent=gene2748;Dbxref=Genbank:NP_626970.1,GeneID:1098172;Name=NP_626970.1;Note=SCC57A.09c%2C unknown%2C len: 65 aa. Highly similar to many other Streptomyces coelicolor proteins of undefined function e.g. TR:Q9XD97(EMBL:AF106004) (63 aa)%2C fasta scores opt: 197 z-score: 305.4 E(): 1.3e-09 47.5%25 identity in 59 aa overlap and TR:CAB62714(EMBL:AL133423) SC4A7.10 (65 aa)%2C fasta scores opt: 156 z-score: 245.9 E(): 2.6e-06 45.5%25 identity in 55 aa overlap. This gene is duplicated on this cosmid and shares 62.9%25 identity%2C in a 62 aa overlap%2C with the adjoining CDS SCC57A.10c. Note codon 4 may offer an alternative translational start site.;gbkey=CDS;gene=SCC57A.09c;product=hypothetical protein;protein_id=NP_626970.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	2986784	2986894	.	-	.	ID=id3408;Dbxref=GeneID:1098172;Note=88.3 %25 identical to repeat region complement(10493..10603).;gbkey=repeat_region;gene=SCC57A.09c
NC_003888.3	RefSeq	gene	2986899	2987096	.	-	.	ID=gene2749;Dbxref=GeneID:1098173;Name=SCC57A.10c;gbkey=Gene;gene=SCC57A.10c;gene_biotype=protein_coding;gene_synonym=SCC57A.10c;locus_tag=SCO2739
NC_003888.3	RefSeq	CDS	2986899	2987096	.	-	0	ID=cds2702;Parent=gene2749;Dbxref=Genbank:NP_626971.1,GeneID:1098173;Name=NP_626971.1;Note=SCC57A.10c%2C unknown%2C len: 65 aa. Highly similar to many other Streptomyces coelicolor proteins of undefined function e.g. TR:Q9XD97(EMBL:AF106004) (63 aa)%2C fasta scores opt: 237 z-score: 360.2 E(): 1.1e-12 64.8%25 identity in 54 aa overlap and TR:Q9Z544(EMBL:AL035212) SC9B2.15C (77 aa)%2C fasta scores opt: 145 z-score: 227.3 E(): 2.9e-05 51.0%25 identity in 49 aa overlap. This gene is duplicated on this cosmid and shares 62.9%25 identity%2C in a 62 aa overlap%2C with the adjoining CDS SCC57A.09c. Note codon 4 may offer an alternative translational start site.;gbkey=CDS;gene=SCC57A.10c;product=hypothetical protein;protein_id=NP_626971.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2986910	2986913	.	-	.	ID=id3409;Dbxref=GeneID:1098173;gbkey=RBS;gene=SCC57A.10c
NC_003888.3	RefSeq	repeat_region	2986978	2987088	.	-	.	ID=id3410;Dbxref=GeneID:1098173;Note=88.3 %25 identical to repeat region complement(10299..10409).;gbkey=repeat_region;gene=SCC57A.10c
NC_003888.3	RefSeq	ribosome_entry_site	2987099	2987104	.	-	.	ID=id3411;gbkey=RBS
NC_003888.3	RefSeq	gene	2987168	2987528	.	+	.	ID=gene2750;Dbxref=GeneID:1098174;Name=SCC57A.11;gbkey=Gene;gene=SCC57A.11;gene_biotype=pseudogene;gene_synonym=SCC57A.11;locus_tag=SCO2740;pseudo=true
NC_003888.3	RefSeq	sequence_feature	2987168	2987528	.	+	.	ID=id3412;Dbxref=GeneID:1098174;Note=SCC57A.11%2C unknown%2C pseudogene. Highly similar to a protein of unknown function from Streptomyces coelicolor TR:Q9XD95(EMBL:AF106004) found within the whiJ sporulation regulatory locus (141 aa). This CDS lacks a suitable translational start codon and contains a frameshift after codon 100%2C following a possible deletion event.%3Bhypothetical protein SCC57A.11 (pseudogene).;gbkey=misc_feature;gene=SCC57A.11
NC_003888.3	RefSeq	gene	2987625	2988134	.	+	.	ID=gene2751;Dbxref=GeneID:1098175;Name=SCC57A.12;gbkey=Gene;gene=SCC57A.12;gene_biotype=protein_coding;gene_synonym=SCC57A.12;locus_tag=SCO2741
NC_003888.3	RefSeq	CDS	2987625	2988134	.	+	0	ID=cds2703;Parent=gene2751;Dbxref=Genbank:NP_626972.1,GeneID:1098175;Name=NP_626972.1;Note=SCC57A.12%2C possible hypothetical protein%2C len: 169 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC57A.12;product=hypothetical protein;protein_id=NP_626972.1;transl_table=11
NC_003888.3	RefSeq	gene	2988198	2989145	.	-	.	ID=gene2752;Dbxref=GeneID:1098176;Name=SCC57A.13c;gbkey=Gene;gene=SCC57A.13c;gene_biotype=protein_coding;gene_synonym=SCC57A.13c;locus_tag=SCO2742
NC_003888.3	RefSeq	CDS	2988198	2989145	.	-	0	ID=cds2704;Parent=gene2752;Dbxref=Genbank:NP_626973.1,GeneID:1098176;Name=NP_626973.1;Note=SCC57A.13c%2C possible sigma factor%2C len: 315 aa. Similar to many Streptomyces coelicolor ECF sigma factors e.g. TR:CAB53126 (EMBL:AL109962) SCJ1.08 (322 aa)%2C fasta scores opt: 506 z-score: 595.6 E(): 8.7e-26 34.5%25 identity in 290 aa overlap. Also similar to Mycobacterium tuberculosis TR:O53378 (EMBL:AL021841) sigma factor (fragment)(312 aa)%2C fasta scores opt: 525 z-score: 617.9 E(): 5e-27 33.7%25 identity in 291 aa overlap. Contains a helix-turn-helix motif situated between residues 152..173 (+2.66 SD).;gbkey=CDS;gene=SCC57A.13c;product=sigma factor;protein_id=NP_626973.1;transl_table=11
NC_003888.3	RefSeq	gene	2989276	2989761	.	+	.	ID=gene2753;Dbxref=GeneID:1098177;Name=SCC57A.14;gbkey=Gene;gene=SCC57A.14;gene_biotype=protein_coding;gene_synonym=SCC57A.14;locus_tag=SCO2743
NC_003888.3	RefSeq	CDS	2989276	2989761	.	+	0	ID=cds2705;Parent=gene2753;Dbxref=Genbank:NP_626974.1,GeneID:1098177;Name=NP_626974.1;Note=SCC57A.14%2C hypothetical protein%2C len: 161 aa%3B similar to TR:Q9FC57 (EMBL:AL391515) Streptomyces coelicolor conserved hypothetical protein SC4B10.30c%2C 156 aa%3B fasta scores: opt: 624 Z-score: 777.1 E(): 1.2e-35%3B 60.897%25 identity in 156 aa overlap;gbkey=CDS;gene=SCC57A.14;product=hypothetical protein;protein_id=NP_626974.1;transl_table=11
NC_003888.3	RefSeq	gene	2989772	2990122	.	-	.	ID=gene2754;Dbxref=GeneID:1098178;Name=SCC57A.15c;gbkey=Gene;gene=SCC57A.15c;gene_biotype=protein_coding;gene_synonym=SCC57A.15c;locus_tag=SCO2744
NC_003888.3	RefSeq	CDS	2989772	2990122	.	-	0	ID=cds2706;Parent=gene2754;Dbxref=Genbank:NP_626975.1,GeneID:1098178;Name=NP_626975.1;Note=SCC57A.15c%2C unknown%2C len: 116 aa.;gbkey=CDS;gene=SCC57A.15c;product=hypothetical protein;protein_id=NP_626975.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	2990392	2990399	.	+	.	ID=id3413;gbkey=RBS
NC_003888.3	RefSeq	gene	2990408	2991451	.	+	.	ID=gene2755;Dbxref=GeneID:1098179;Name=SCC57A.16;gbkey=Gene;gene=SCC57A.16;gene_biotype=protein_coding;gene_synonym=SCC57A.16;locus_tag=SCO2745
NC_003888.3	RefSeq	CDS	2990408	2991451	.	+	0	ID=cds2707;Parent=gene2755;Dbxref=Genbank:NP_626976.1,GeneID:1098179;Name=NP_626976.1;Note=SCC57A.16%2C probable LacI-family transcriptional regulator%2C len: 347 aa. Highly similar to many other regulators including: Escherichia coli SW:CYTR_ECOLI (EMBL:X03683) transcriptional repressor CytR (341 aa)%2C fasta scores opt: 714 z-score: 751.4 E(): 0 34.9%25 identity in 332 aa overlap and Streptomyces coelicolor TR:Q9Z509 (EMBL:AL035591)  transcriptional regulator SCC54.16 (368 aa)%2C fasta scores opt: 843 z-score: 885.1 E():0 43.4%25 identity in 348 aa overlap. Contains a Prosite hit to PS00356 Bacterial regulatory proteins%2C lacI family signature and Pfam hits to PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family. The possible helix-turn-helix motif is situated between residues 2..23 (+5.89 SD).;gbkey=CDS;gene=SCC57A.16;product=LacI family transcriptional regulator;protein_id=NP_626976.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2990408	2990488	.	+	.	ID=id3414;Dbxref=GeneID:1098179;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 47.40%2C E-value 5.3e-12;gbkey=misc_feature;gene=SCC57A.16
NC_003888.3	RefSeq	sequence_feature	2990417	2990473	.	+	.	ID=id3415;Dbxref=GeneID:1098179;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCC57A.16
NC_003888.3	RefSeq	sequence_feature	2990579	2991304	.	+	.	ID=id3416;Dbxref=GeneID:1098179;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 108.80%2C E-value 1.1e-28;gbkey=misc_feature;gene=SCC57A.16
NC_003888.3	RefSeq	ribosome_entry_site	2991436	2991441	.	+	.	ID=id3417;Dbxref=GeneID:1098179;gbkey=RBS;gene=SCC57A.16
NC_003888.3	RefSeq	gene	2991448	2993001	.	+	.	ID=gene2756;Dbxref=GeneID:1098180;Name=SCC57A.17;gbkey=Gene;gene=SCC57A.17;gene_biotype=protein_coding;gene_synonym=SCC57A.17;locus_tag=SCO2746
NC_003888.3	RefSeq	CDS	2991448	2993001	.	+	0	ID=cds2708;Parent=gene2756;Dbxref=Genbank:NP_626977.1,GeneID:1098180;Name=NP_626977.1;Note=SCC57A.17%2C ABC transporter%2C ATP binding component%2C len: 517 aa. Highly similar to many including: Escherichia coli SW:RBSA_ECOLI(EMBL:M13169) ribose transport ATP-binding protein RbsA (501 aa)%2C fasta scores opt: 1421 z-score: 1446.1 E(): 0 47.5%25 identity in 493 aa overlap and Streptomyces coelicolor TR:O69942(EMBL:AL023862) ABC transporter ATP binding protein SC3F9.02 (505 aa)%2C fasta scores opt: 1495 z-score: 1521.0 E(): 0 50.2%25 identity in 494 aa overlap. Contains Prosite hits to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains 2x Pfam matches to entry PF00005 ABC_tran%2C ABC transporter.;gbkey=CDS;gene=SCC57A.17;product=ABC transporter ATP-binding protein;protein_id=NP_626977.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2991550	2992110	.	+	.	ID=id3418;Dbxref=GeneID:1098180;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 182.20%2C E-value 8.2e-51;gbkey=misc_feature;gene=SCC57A.17
NC_003888.3	RefSeq	sequence_feature	2991571	2991594	.	+	.	ID=id3419;Dbxref=GeneID:1098180;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC57A.17
NC_003888.3	RefSeq	sequence_feature	2992291	2992869	.	+	.	ID=id3420;Dbxref=GeneID:1098180;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 79.30%2C E-value 7.9e-20;gbkey=misc_feature;gene=SCC57A.17
NC_003888.3	RefSeq	sequence_feature	2992642	2992686	.	+	.	ID=id3421;Dbxref=GeneID:1098180;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCC57A.17
NC_003888.3	RefSeq	ribosome_entry_site	2992980	2992984	.	+	.	ID=id3422;Dbxref=GeneID:1098180;gbkey=RBS;gene=SCC57A.17
NC_003888.3	RefSeq	gene	2992991	2994946	.	+	.	ID=gene2757;Dbxref=GeneID:1098181;Name=SCC57A.18;gbkey=Gene;gene=SCC57A.18;gene_biotype=protein_coding;gene_synonym=SCC57A.18;locus_tag=SCO2747
NC_003888.3	RefSeq	CDS	2992991	2994946	.	+	0	ID=cds2709;Parent=gene2757;Dbxref=Genbank:NP_626978.1,GeneID:1098181;Name=NP_626978.1;Note=SCC57A.18%2C bifunctional carbohydrate binding and transport protein%2C len: 613 aa. The N-terminus is highly similar to many ribose transport system permeases e.g. Escherichia coli SW:RBSC_ECOLI(EMBL:L10328) ribose transport system permease RbsC (321 aa)%2C fasta scores opt: 846 z-score: 833.8 E(): 0 47.1%25 identity in 310 aa overlap. The C-terminus is highly similar to many ribose-binding proteins e.g. Escherichia coli SW:RBSB_ECOLI(EMBL:K00511) D-ribose-binding periplasmic protein precursor (296 aa)%2C fasta scores opt: 863 z-score: 847.0 E():0 46.9%25 identity in 303 aa overlap. Contains a Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family. The N-terminus contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC57A.18;product=bifunctional carbohydrate binding and transport protein;protein_id=NP_626978.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2994104	2994841	.	+	.	ID=id3423;Dbxref=GeneID:1098181;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 81.00%2C E-value 2.4e-20;gbkey=misc_feature;gene=SCC57A.18
NC_003888.3	RefSeq	gene	2994994	2995914	.	+	.	ID=gene2758;Dbxref=GeneID:1098182;Name=SCC57A.19;gbkey=Gene;gene=SCC57A.19;gene_biotype=protein_coding;gene_synonym=SCC57A.19;locus_tag=SCO2748
NC_003888.3	RefSeq	CDS	2994994	2995914	.	+	0	ID=cds2710;Parent=gene2758;Dbxref=Genbank:NP_626979.1,GeneID:1098182;Name=NP_626979.1;Note=SCC57A.19%2C carbohydrate kinase%2C len: 306 aa. Highly similar to several ribokinases including: Escherichia coli SW:RBSK_ECOLI (EMBL:M13169) ribokinase (EC 2.7.1.15) (309aa)%2C fasta scores opt: 602 z-score: 638.1 E(): 3.7e-28 40.5%25 identity in 299 aa overlap and Bacillus subtilis SW:RBSK_BACSU (EMBL:Z25798) ribokinase (EC 2.7.1.15) (293 aa)%2C fasta scores opt: 639 z-score: 677.0 E(): 2.5e-30 41.1%25 identity in 299 aa overlap. Contains Prosite hits to PS00583 pfkB family of carbohydrate kinases signature 1 and PS00584 pfkB family of carbohydrate kinases signature 2. Also contains a Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase.;gbkey=CDS;gene=SCC57A.19;product=carbohydrate kinase;protein_id=NP_626979.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2995111	2995764	.	+	.	ID=id3424;Dbxref=GeneID:1098182;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 142.40%2C E-value 9.7e-44;gbkey=misc_feature;gene=SCC57A.19
NC_003888.3	RefSeq	sequence_feature	2995111	2995185	.	+	.	ID=id3425;Dbxref=GeneID:1098182;Note=PS00583 pfkB family of carbohydrate kinases signature 1;gbkey=misc_feature;gene=SCC57A.19
NC_003888.3	RefSeq	sequence_feature	2995729	2995770	.	+	.	ID=id3426;Dbxref=GeneID:1098182;Note=PS00584 pfkB family of carbohydrate kinases signature 2;gbkey=misc_feature;gene=SCC57A.19
NC_003888.3	RefSeq	gene	2995911	2996300	.	+	.	ID=gene2759;Dbxref=GeneID:1098183;Name=SCC57A.20;gbkey=Gene;gene=SCC57A.20;gene_biotype=protein_coding;gene_synonym=SCC57A.20;locus_tag=SCO2749
NC_003888.3	RefSeq	CDS	2995911	2996300	.	+	0	ID=cds2711;Parent=gene2759;Dbxref=Genbank:NP_626980.1,GeneID:1098183;Name=NP_626980.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;gene=SCC57A.20;product=D-ribose pyranase;protein_id=NP_626980.1;transl_table=11
NC_003888.3	RefSeq	gene	2996489	2997352	.	-	.	ID=gene2760;Dbxref=GeneID:1098184;Name=SCC57A.21c;gbkey=Gene;gene=SCC57A.21c;gene_biotype=protein_coding;gene_synonym=SCC57A.21c;locus_tag=SCO2750
NC_003888.3	RefSeq	CDS	2996489	2997352	.	-	0	ID=cds2712;Parent=gene2760;Dbxref=Genbank:NP_626981.1,GeneID:1098184;Name=NP_626981.1;Note=SCC57A.21c%2C hypothetical protein%2C len: 287 aa%3B similar to TR:CAC41509 (EMBL:AL591782) Rhizobium meliloti (Sinorhizobium meliloti) conserved hypothetical protein SMC04130%2C 274 aa%3B fasta scores: opt: 796 Z-score: 889.6 E(): 6.4e-42%3B 47.191%25 identity in 267 aa overlap;gbkey=CDS;gene=SCC57A.21c;product=hypothetical protein;protein_id=NP_626981.1;transl_table=11
NC_003888.3	RefSeq	gene	2997349	2998515	.	-	.	ID=gene2761;Dbxref=GeneID:1098185;Name=SCC57A.22c;gbkey=Gene;gene=SCC57A.22c;gene_biotype=protein_coding;gene_synonym=SCC57A.22c;locus_tag=SCO2751
NC_003888.3	RefSeq	CDS	2997349	2998515	.	-	0	ID=cds2713;Parent=gene2761;Dbxref=Genbank:NP_626982.1,GeneID:1098185;Name=NP_626982.1;Note=SCC57A.22c%2C unknown%2C len: 388 aa.;gbkey=CDS;gene=SCC57A.22c;product=hypothetical protein;protein_id=NP_626982.1;transl_table=11
NC_003888.3	RefSeq	gene	2998512	2999648	.	-	.	ID=gene2762;Dbxref=GeneID:1098186;Name=SCC57A.23c;gbkey=Gene;gene=SCC57A.23c;gene_biotype=protein_coding;gene_synonym=SCC57A.23c;locus_tag=SCO2752
NC_003888.3	RefSeq	CDS	2998512	2999648	.	-	0	ID=cds2714;Parent=gene2762;Dbxref=Genbank:NP_626983.1,GeneID:1098186;Name=NP_626983.1;Note=SCC57A.23c%2C possible oxidoreductase%2C len: 378 aa. Weakly similar to several other oxidoreductases e.g. Streptomyces coelicolor TR:O69945 (EMBL:AL023862) oxidoreductase (430 aa)%2C fasta scores opt: 252 z-score: 300.4 E(): 2.4e-09 28.8%25 identity in 278 aa overlap. Contains a Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=SCC57A.23c;product=oxidoreductase;protein_id=NP_626983.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2998839	2999648	.	-	.	ID=id3427;Dbxref=GeneID:1098186;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 70.10%2C E-value 4.8e-17;gbkey=misc_feature;gene=SCC57A.23c
NC_003888.3	RefSeq	ribosome_entry_site	2999866	2999870	.	+	.	ID=id3428;gbkey=RBS
NC_003888.3	RefSeq	gene	2999879	3000925	.	+	.	ID=gene2763;Dbxref=GeneID:1098187;Name=SCC57A.24;gbkey=Gene;gene=SCC57A.24;gene_biotype=protein_coding;gene_synonym=SCC57A.24;locus_tag=SCO2753
NC_003888.3	RefSeq	CDS	2999879	3000925	.	+	0	ID=cds2715;Parent=gene2763;Dbxref=Genbank:NP_626984.1,GeneID:1098187;Name=NP_626984.1;Note=SCC57A.24%2C possible LacI-family transcriptional regulator%2C len: 348 aa. Similar to many other Streptomyces coelicolor LacI-family regulators including: TR:Q9X862 (EMBL:AL049661) SCE134.07 (353 aa)%2C fasta scores opt: 489 z-score: 554.3 E(): 1.8e-23 33.8%25 identity in 358 aa overlap and TR:O86795 (EMBL:AL031317) SC6G4.32 (355 aa)%2C fasta scores opt: 460 z-score: 521.7 E(): 1.2e-21 37.1%25 identity in 353 aa overlap. Contains a Prosite hit to PS00356 Bacterial regulatory proteins%2C lacI family signature and Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family. A helix-turn-helix motif is situated between residues 3..24 (+5.80 SD).;gbkey=CDS;gene=SCC57A.24;product=LacI family transcriptional regulator;protein_id=NP_626984.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	2999879	2999962	.	+	.	ID=id3429;Dbxref=GeneID:1098187;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 41.60%2C E-value 2.7e-10;gbkey=misc_feature;gene=SCC57A.24
NC_003888.3	RefSeq	sequence_feature	2999891	2999947	.	+	.	ID=id3430;Dbxref=GeneID:1098187;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCC57A.24
NC_003888.3	RefSeq	sequence_feature	3000053	3000823	.	+	.	ID=id3431;Dbxref=GeneID:1098187;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 103.40%2C E-value 4.3e-27;gbkey=misc_feature;gene=SCC57A.24
NC_003888.3	RefSeq	gene	3001125	3001931	.	+	.	ID=gene2764;Dbxref=GeneID:1098188;Name=SCC57A.25;gbkey=Gene;gene=SCC57A.25;gene_biotype=protein_coding;gene_synonym=SCC57A.25;locus_tag=SCO2754
NC_003888.3	RefSeq	CDS	3001125	3001931	.	+	0	ID=cds2716;Parent=gene2764;Dbxref=Genbank:NP_626985.1,GeneID:1098188;Name=NP_626985.1;Note=SCC57A.25%2C unknown%2C len: 268 aa. Weakly similar to Streptomyces coelicolor TR:Q9Z596(EMBL:AL035478) oxidoreductase (279 aa)%2C fasta scores opt: 185 z-score: 212.6 E(): 0.00019 29.6%25 identity in 247 aa overlap.;gbkey=CDS;gene=SCC57A.25;product=hypothetical protein;protein_id=NP_626985.1;transl_table=11
NC_003888.3	RefSeq	gene	3001915	3002577	.	-	.	ID=gene2765;Dbxref=GeneID:1098189;Name=SCC57A.26c;gbkey=Gene;gene=SCC57A.26c;gene_biotype=protein_coding;gene_synonym=SCC57A.26c;locus_tag=SCO2755
NC_003888.3	RefSeq	CDS	3001915	3002577	.	-	0	ID=cds2717;Parent=gene2765;Dbxref=Genbank:NP_626986.1,GeneID:1098189;Name=NP_626986.1;Note=SCC57A.26c%2C possible acetyltransferase%2C len: 220 aa. Weakly similar to Deinococcus radiodurans TR:AAF10183 (EMBL:AE001918) acetyltransferase (188 aa)%2C fasta scores opt: 308 z-score: 385.7 E(): 4.3e-14 37.0%25 identity in 189 aa overlap and Myxococcus xanthus TR:O54394 (EMBL:U81516) hypothetical 24.4 KD protein (216 aa)%2C fasta scores opt: 453 z-score: 561.2 E(): 7.2e-24 46.6%25 identity in 206 aa overlap. Contains a Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCC57A.26c;product=acetyltransferase;protein_id=NP_626986.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3002104	3002538	.	-	.	ID=id3432;Dbxref=GeneID:1098189;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 13.90%2C E-value 0.046;gbkey=misc_feature;gene=SCC57A.26c
NC_003888.3	RefSeq	gene	3002574	3003509	.	-	.	ID=gene2766;Dbxref=GeneID:1098190;Name=SCC57A.27c;gbkey=Gene;gene=SCC57A.27c;gene_biotype=protein_coding;gene_synonym=SCC57A.27c;locus_tag=SCO2756
NC_003888.3	RefSeq	CDS	3002574	3003509	.	-	0	ID=cds2718;Parent=gene2766;Dbxref=Genbank:NP_626987.1,GeneID:1098190;Name=NP_626987.1;Note=SCC57A.27c%2C integral membrane protein%2C len: 311 aa. Similar to many proteins of undefined function including: Deinococcus radiodurans TR:AAF09725(EMBL:AE001876) conserved hypothetical protein (325 aa)%2C fasta scores opt: 713 z-score: 803.2 E(): 0 41.8%25 identity in 280 aa overlap and Bacillus subtilis SW:YOAV_BACSU(EMBL:AF027868) hypothetical 33.0 KD protein (292 aa)%2C fasta scores opt: 355 z-score: 404.7 E(): 3.8e-15 26.3%25 identity in 297 aa overlap. Contains 2xPfam matches to entry PF00892 DUF6%2C Integral membrane protein.;gbkey=CDS;gene=SCC57A.27c;product=hypothetical protein;protein_id=NP_626987.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3002634	3003059	.	-	.	ID=id3433;Dbxref=GeneID:1098190;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 48.80%2C E-value 1.2e-10;gbkey=misc_feature;gene=SCC57A.27c
NC_003888.3	RefSeq	sequence_feature	3003081	3003470	.	-	.	ID=id3434;Dbxref=GeneID:1098190;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 27.70%2C E-value 0.00027;gbkey=misc_feature;gene=SCC57A.27c
NC_003888.3	RefSeq	gene	3003658	3004599	.	+	.	ID=gene2767;Dbxref=GeneID:1098191;Name=SCC57A.28;gbkey=Gene;gene=SCC57A.28;gene_biotype=protein_coding;gene_synonym=SCC57A.28;locus_tag=SCO2757
NC_003888.3	RefSeq	CDS	3003658	3004599	.	+	0	ID=cds2719;Parent=gene2767;Dbxref=Genbank:NP_626988.1,GeneID:1098191;Name=NP_626988.1;Note=SCC57A.28%2C possible LysR-family transcriptional regulator%2C len: 313 aa. Similar to several other regulators including: Escherichia coli SW:XAPR_ECOLI (EMBL:X63976) xanthosine operon regulatory protein (294 aa)%2C fasta scores opt: 322 z-score: 366.5 E(): 5e-13 27.4%25 identity in 292 aa overlap. Also similar to several other  Streptomyces coelicolor regulators including: TR:O86805 (EMBL:AL031317) SC6G4.44 (306 aa)%2C fasta scores opt: 523 z-score: 590.0 E(): 1.8e-25 37.2%25 identity in 320 aa overlap and TR:CAB62680 (EMBL:AL133422) SCM1.22C (301 aa)%2C fasta scores opt: 636 z-score: 715.9 E(): 1.8e-32 41.5%25 identity in 294 aa overlap. Contains a Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C with the helix-turn-helix motif situated between residues 17..38 (+4.21 SD).;gbkey=CDS;gene=SCC57A.28;product=LysR family transcriptional regulator;protein_id=NP_626988.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3003667	3004095	.	+	.	ID=id3435;Dbxref=GeneID:1098191;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 144.50%2C E-value 1.8e-39;gbkey=misc_feature;gene=SCC57A.28
NC_003888.3	RefSeq	ribosome_entry_site	3004783	3004788	.	+	.	ID=id3436;gbkey=RBS
NC_003888.3	RefSeq	gene	3004794	3006641	.	+	.	ID=gene2768;Dbxref=GeneID:1098192;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;gene_synonym=nagA;locus_tag=SCO2758
NC_003888.3	RefSeq	CDS	3004794	3006641	.	+	0	ID=cds2720;Parent=gene2768;Dbxref=Genbank:NP_626989.1,GeneID:1098192;Name=NP_626989.1;Note=SCC57A.29%2C nagA%2C beta-N-acetylglucosaminidase ( hypothetical protein)%2C len: 615 aa%2C Highly similar to Streptomyces thermoviolaceus TR:O82840 (EMBL:AB008771) beta-N-acetylglucosaminidase precursor (EC 3.2.1.30) (632 aa)%2C fasta scores opt: 3169 z-score: 3414.1 E():0 80.0%25 identity in 614 aa overlap. Note the N-terminus of the S. coelicolor protein varies significantly from that of the S. thermoviolaceus protein. Contains a Prosite hit to PS00775 Glycosyl hydrolases family 3 active site and a Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3. Also contains a possible N-terminal region signal peptide sequence;gbkey=CDS;gene=nagA;product=beta-N-acetylglucosaminidase;protein_id=NP_626989.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3005055	3005936	.	+	.	ID=id3437;Dbxref=GeneID:1098192;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3%2C score 342.90%2C E-value 3.5e-99;gbkey=misc_feature;gene=nagA
NC_003888.3	RefSeq	sequence_feature	3005748	3005801	.	+	.	ID=id3438;Dbxref=GeneID:1098192;Note=PS00775 Glycosyl hydrolases family 3 active site;gbkey=misc_feature;gene=nagA
NC_003888.3	RefSeq	sequence_feature	3006746	3008295	.	-	.	ID=id3439;Note=identical to SCIS110 Y00434 Streptomyces coelicolor insertion sequence IS110 from 1..1551.;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	3006746	3006771	.	-	.	ID=id3440;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3006815	3008032	.	-	.	ID=gene2769;Dbxref=GeneID:1098193;Name=SCC57A.30c;gbkey=Gene;gene=SCC57A.30c;gene_biotype=protein_coding;gene_synonym=SCC57A.30c;locus_tag=SCO2759
NC_003888.3	RefSeq	CDS	3006815	3008032	.	-	0	ID=cds2721;Parent=gene2769;Dbxref=Genbank:NP_626990.1,GeneID:1098193;Name=NP_626990.1;Note=SCC57A.30c%2C probable IS110 transposase%2C len: 405 aa. Previously sequenced SW:YIS1_STRCO(EMBL:Y00434) hypothetical protein within the Streptomyces coelicolor insertion element IS110. Contains a Pfam match to entry PF01548 Transposase_9%2C Transposase. Also highly similar to the Streptomyces coelicolor insertion element fragments: TR:O69926(EMBL:AL023861) SC3C8.13 (>175 aa)%2C fasta scores opt: 804 z-score: 907.9 E():0 71.3%25 identity in 171 aa overlap and TR:O69929(EMBL:AL023861) SC3C8.17 (>230 aa)%2C fasta scores opt: 1023 z-score: 1150.6 E(): 0 69.1%25 identity in 230 aa overlap.;gbkey=CDS;gene=SCC57A.30c;product=transposase;protein_id=NP_626990.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3007511	3007807	.	-	.	ID=id3441;Dbxref=GeneID:1098193;Note=Pfam match to entry PF01548 Transposase_9%2C Transposase%2C score 142.40%2C E-value 7.9e-39;gbkey=misc_feature;gene=SCC57A.30c
NC_003888.3	RefSeq	repeat_region	3008278	3008295	.	-	.	ID=id3442;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3008299	3008949	.	+	.	ID=gene2770;Dbxref=GeneID:1098194;Name=SCC57A.31;gbkey=Gene;gene=SCC57A.31;gene_biotype=protein_coding;gene_synonym=SCC57A.31;locus_tag=SCO2760
NC_003888.3	RefSeq	CDS	3008299	3008949	.	+	0	ID=cds2722;Parent=gene2770;Dbxref=Genbank:NP_626991.1,GeneID:1098194;Name=NP_626991.1;Note=SCC57A.31%2C possible membrane protein%2C len: 216 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCC57A.31;product=hypothetical protein;protein_id=NP_626991.1;transl_table=11
NC_003888.3	RefSeq	gene	3008987	3010411	.	-	.	ID=gene2771;Dbxref=GeneID:1098195;Name=SCC57A.32c;gbkey=Gene;gene=SCC57A.32c;gene_biotype=protein_coding;gene_synonym=SCC57A.32c;locus_tag=SCO2761
NC_003888.3	RefSeq	CDS	3008987	3010411	.	-	0	ID=cds2723;Parent=gene2771;Dbxref=Genbank:NP_626992.1,GeneID:1098195;Name=NP_626992.1;Note=SCC57A.32c%2C possible  tripeptidyl aminopeptidase%2C len: 474 aa. Identical to Streptomyces lividans TR:Q54408(EMBL:L46588) tripeptidyl aminopeptidase precursor (474 aa)%2C fasta scores opt: 3236 z-score: 3793.9 E(): 0%3B 99.6%25 identity in 474 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC57A.32c;product=tripeptidyl aminopeptidase;protein_id=NP_626992.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3010416	3010420	.	-	.	ID=id3443;gbkey=RBS
NC_003888.3	RefSeq	gene	3010475	3010867	.	-	.	ID=gene2772;Dbxref=GeneID:1098196;Name=SCC57A.33c;gbkey=Gene;gene=SCC57A.33c;gene_biotype=protein_coding;gene_synonym=SCC57A.33c;locus_tag=SCO2762
NC_003888.3	RefSeq	CDS	3010475	3010867	.	-	0	ID=cds2724;Parent=gene2772;Dbxref=Genbank:NP_626993.1,GeneID:1098196;Name=NP_626993.1;Note=SCC57A.33c%2C possible hypothetical protein%2C len: 130 aa. Similar to Streptomyces coelicolor TR:CAB59706(EMBL:AL132707) spore-associated protein precursor (154 aa)%2C fasta scores opt: 113 z-score: 146.1 E(): 0.95 30.6%25 identity in 121 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC57A.33c;product=hypothetical protein;protein_id=NP_626993.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3010877	3010881	.	-	.	ID=id3444;gbkey=RBS
NC_003888.3	RefSeq	gene	3010977	3014708	.	-	.	ID=gene2773;Dbxref=GeneID:1098197;Name=SCC57A.34c;gbkey=Gene;gene=SCC57A.34c;gene_biotype=protein_coding;gene_synonym=SCC57A.34c;locus_tag=SCO2763
NC_003888.3	RefSeq	CDS	3010977	3014708	.	-	0	ID=cds2725;Parent=gene2773;Dbxref=Genbank:NP_626994.1,GeneID:1098197;Name=NP_626994.1;Note=SCC57A.34c%2C ABC transporter%2C ATP-binding component%2C len: 1253 aa. Highly similar to many Prokaryotic and Eukaryotic transport proteins including: Mycobacterium tuberculosis TR:O53645(EMBL:AL021928) ABC transporter (1194 aa)%2C fasta scores opt: 2002 z-score: 2049.7 E():0 53.0%25 identity in 1231 aa overlap and Drosophila melanogaster SW:MDR4_DROME(EMBL:M59076) multidrug resistance protein homolog 50 (P-glycoprotein 50) (1302 aa)%2C fasta scores opt: 1550 z-score: 1585.8 E():0 30.7%25 identity in 1267 aa overlap. Contains Prosite hits to 2x PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains Pfam matches to entries 2x PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C 2x Pfam match to entry PF00005 ABC_tran%2C ABC transporter and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCC57A.34c;product=ABC transporter ATP-binding protein;protein_id=NP_626994.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3011097	3011651	.	-	.	ID=id3445;Dbxref=GeneID:1098197;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 208.60%2C E-value 9.2e-59;gbkey=misc_feature;gene=SCC57A.34c
NC_003888.3	RefSeq	sequence_feature	3011607	3011630	.	-	.	ID=id3446;Dbxref=GeneID:1098197;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC57A.34c
NC_003888.3	RefSeq	sequence_feature	3011865	3012680	.	-	.	ID=id3447;Dbxref=GeneID:1098197;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 138.80%2C E-value 9.7e-38;gbkey=misc_feature;gene=SCC57A.34c
NC_003888.3	RefSeq	sequence_feature	3013059	3013613	.	-	.	ID=id3448;Dbxref=GeneID:1098197;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 199.40%2C E-value 5.6e-56;gbkey=misc_feature;gene=SCC57A.34c
NC_003888.3	RefSeq	sequence_feature	3013236	3013280	.	-	.	ID=id3449;Dbxref=GeneID:1098197;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCC57A.34c
NC_003888.3	RefSeq	sequence_feature	3013569	3013592	.	-	.	ID=id3450;Dbxref=GeneID:1098197;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC57A.34c
NC_003888.3	RefSeq	sequence_feature	3013836	3014645	.	-	.	ID=id3451;Dbxref=GeneID:1098197;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 88.00%2C E-value 1.9e-22;gbkey=misc_feature;gene=SCC57A.34c
NC_003888.3	RefSeq	ribosome_entry_site	3014716	3014720	.	-	.	ID=id3452;gbkey=RBS
NC_003888.3	RefSeq	gene	3014808	3015818	.	-	.	ID=gene2774;Dbxref=GeneID:1098198;Name=SCC57A.35c;gbkey=Gene;gene=SCC57A.35c;gene_biotype=protein_coding;gene_synonym=SCC57A.35c;locus_tag=SCO2764
NC_003888.3	RefSeq	CDS	3014808	3015818	.	-	0	ID=cds2726;Parent=gene2774;Dbxref=Genbank:NP_626995.1,GeneID:1098198;Name=NP_626995.1;Note=SCC57A.35c%2C possible lipoprotein%2C len: 336 aa. Contains an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCC57A.35c;product=lipoprotein;protein_id=NP_626995.1;transl_table=11
NC_003888.3	RefSeq	gene	3015897	3016268	.	+	.	ID=gene2775;Dbxref=GeneID:1098199;Name=SCC57A.36;gbkey=Gene;gene=SCC57A.36;gene_biotype=protein_coding;gene_synonym=SCC57A.36;locus_tag=SCO2765
NC_003888.3	RefSeq	CDS	3015897	3016268	.	+	0	ID=cds2727;Parent=gene2775;Dbxref=Genbank:NP_626996.1,GeneID:1098199;Name=NP_626996.1;Note=SCC57A.36%2C unknown%2C len: 123 aa.;gbkey=CDS;gene=SCC57A.36;product=hypothetical protein;protein_id=NP_626996.1;transl_table=11
NC_003888.3	RefSeq	gene	3016395	3017255	.	+	.	ID=gene2776;Dbxref=GeneID:1098200;Name=SCC57A.37;gbkey=Gene;gene=SCC57A.37;gene_biotype=protein_coding;gene_synonym=SCC57A.37;locus_tag=SCO2766
NC_003888.3	RefSeq	CDS	3016395	3017255	.	+	0	ID=cds2728;Parent=gene2776;Dbxref=Genbank:NP_626997.1,GeneID:1098200;Name=NP_626997.1;Note=SCC57A.37%2C possible  ribonuclease%2C len: 286 aa. Highly similar to Bacillus subtilis SW:RN_BACSU (EMBL:D01097) ribonuclease precursor (EC 3.1.-.-) (289 aa)%2C fasta scores opt: 1165 z-score: 1237.7 E():0 61.5%25 identity in 273 aa overlap. Contains a possible N-terminal signal sequence rich in the amino acid Ala.;gbkey=CDS;gene=SCC57A.37;product=ribonuclease;protein_id=NP_626997.1;transl_table=11
NC_003888.3	RefSeq	gene	3017260	3019491	.	-	.	ID=gene2777;Dbxref=GeneID:1098201;Name=SCC57A.38c;gbkey=Gene;gene=SCC57A.38c;gene_biotype=protein_coding;gene_synonym=SCC57A.38c;locus_tag=SCO2767
NC_003888.3	RefSeq	CDS	3017260	3019491	.	-	0	ID=cds2729;Parent=gene2777;Dbxref=Genbank:NP_626998.1,GeneID:1098201;Name=NP_626998.1;Note=SCC57A.38c%2C possible ATP/GTP-binding protein%2C len: 743 aa. Weakly similar to another Streptomyces coelicolor TR:O86768(EMBL:AL031035) ATP/GTP-binding protein (886 aa)%2C fasta scores opt: 328 z-score: 356.5 E(): 1.8e-12 28.9%25 identity in 699 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCC57A.38c;product=ATP/GTP-binding protein;protein_id=NP_626998.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3019180	3019203	.	-	.	ID=id3453;Dbxref=GeneID:1098201;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCC57A.38c
NC_003888.3	RefSeq	repeat_region	3019420	3019465	.	-	.	ID=id3454;Dbxref=GeneID:1098201;Note=direct repeat of bases complement(43021..43066) with 43/46 matches.;gbkey=repeat_region;gene=SCC57A.38c
NC_003888.3	RefSeq	gene	3019488	3019907	.	-	.	ID=gene2778;Dbxref=GeneID:1098202;Name=SCC57A.39c;gbkey=Gene;gene=SCC57A.39c;gene_biotype=protein_coding;gene_synonym=SCC57A.39c;locus_tag=SCO2768
NC_003888.3	RefSeq	CDS	3019488	3019907	.	-	0	ID=cds2730;Parent=gene2778;Dbxref=Genbank:NP_626999.1,GeneID:1098202;Name=NP_626999.1;Note=SCC57A.39c%2C unknown%2C len: 139 aa.;gbkey=CDS;gene=SCC57A.39c;product=hypothetical protein;protein_id=NP_626999.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3019506	3019551	.	-	.	ID=id3455;Dbxref=GeneID:1098202;Note=direct repeat of bases complement(42935..42980) with 43/46 matches.;gbkey=repeat_region;gene=SCC57A.39c
NC_003888.3	RefSeq	gene	3019967	3021661	.	-	.	ID=gene2779;Dbxref=GeneID:1098203;Name=SCC57A.40c;gbkey=Gene;gene=SCC57A.40c;gene_biotype=protein_coding;gene_synonym=SCC57A.40c;locus_tag=SCO2769
NC_003888.3	RefSeq	CDS	3019967	3021661	.	-	0	ID=cds2731;Parent=gene2779;Dbxref=Genbank:NP_627000.1,GeneID:1098203;Name=NP_627000.1;Note=SCC57A.40c%2C possible acetolactate synthase%2C len: 564 aa. Similar to many e.g. Escherichia coli SW:ILVB_ECOLI (EMBL:J01633) acetolactate synthase isozyme I large subunit (EC 4.1.3.18) (562 aa)%2C fasta scores opt: 732 z-score: 776.9 E(): 0 29.6%25 identity in 538 aa overlap. Contains a Prosite hit to PS00187 Thiamine pyrophosphate enzymes signature and a Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes;gbkey=CDS;gene=SCC57A.40c;product=acetolactate synthase;protein_id=NP_627000.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3020009	3021556	.	-	.	ID=id3456;Dbxref=GeneID:1098203;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes%2C score 266.20%2C E-value 4e-82;gbkey=misc_feature;gene=SCC57A.40c
NC_003888.3	RefSeq	sequence_feature	3020282	3020341	.	-	.	ID=id3457;Dbxref=GeneID:1098203;Note=PS00187 Thiamine pyrophosphate enzymes signature;gbkey=misc_feature;gene=SCC57A.40c
NC_003888.3	RefSeq	gene	3021658	3022626	.	-	.	ID=gene2780;Dbxref=GeneID:1098204;Name=SCC105.01c;gbkey=Gene;gene=SCC105.01c;gene_biotype=protein_coding;gene_synonym=SCC105.01c,SCC57A.41c,speB;locus_tag=SCO2770
NC_003888.3	RefSeq	CDS	3021658	3022626	.	-	0	ID=cds2732;Parent=gene2780;Dbxref=Genbank:NP_733583.1,GeneID:1098204;Name=NP_733583.1;Note=SCC105.01c%2C speB%2C agmatinase (fragment)%2C len: >302 aa%3B highly similar to N-terminal region of SW:SPEB_STRCL (EMBL:L15470) Streptomyces clavuligerus possible agmatinase (EC 3.5.3.11) Pah%2C 313 aa%3B fasta scores: opt: 843 z-score: 968.6 E(): 0%3B 43.3%25 identity in 293 aa overlap and of SW:SPEB_ECOLI (EMBL:M32363) Escherichia coli agmatinase (EC 3.5.3.11)%2C SpeB%2C 306 aa%3B fasta scores: opt: 473 z-score: 546.7 E(): 5.1e-23%3B 41.8%25 identity in 282 aa overlap. Contains Pfam match to entry PF00491 arginase%2C Arginase family and matches to Prosite entries PS00147 Arginase family signature 1%2C PS00148 Arginase family signature 2%2C PS00678 Trp-Asp (WD) repeats signature and PS01053 Arginase family signature 3~SCC57A.41c%2C possible agmatinase%2C partial CDS%2C len: >53 aa. Highly similar to Escherichia coli SW:SPEB_ECOLI(EMBL:M32363) agmatinase (EC 3.5.3.11) (306 aa)%2C fasta scores opt: 145 z-score: 242.9 E(): 3.8e-06 49.0%25 identity in 49 aa overlap and Schizosaccharomyces pombe SW:SPEB_SCHPO(EMBL:Z68166) agmatinase precursor (EC 3.5.3.11) (394 aa)%2C fasta scores opt: 159 z-score: 263.7 E(): 2.7e-07 55.6%25 identity in 45 aa overlap.;gbkey=CDS;gene=SCC105.01c;product=agmatinase;protein_id=NP_733583.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3021760	3022506	.	-	.	ID=id3458;Dbxref=GeneID:1098204;Note=Pfam match to entry PF00491 arginase%2C Arginase family%2C score 223.90%2C E-value 1e-75;gbkey=misc_feature;gene=SCC105.01c
NC_003888.3	RefSeq	sequence_feature	3021844	3021909	.	-	.	ID=id3459;Dbxref=GeneID:1098204;Note=PS01053 Arginase family signature 3;gbkey=misc_feature;gene=SCC105.01c
NC_003888.3	RefSeq	sequence_feature	3022150	3022194	.	-	.	ID=id3460;Dbxref=GeneID:1098204;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCC105.01c
NC_003888.3	RefSeq	sequence_feature	3022162	3022188	.	-	.	ID=id3461;Dbxref=GeneID:1098204;Note=PS00148 Arginase family signature 2;gbkey=misc_feature;gene=SCC105.01c
NC_003888.3	RefSeq	sequence_feature	3022216	3022257	.	-	.	ID=id3462;Dbxref=GeneID:1098204;Note=PS00147 Arginase family signature 1;gbkey=misc_feature;gene=SCC105.01c
NC_003888.3	RefSeq	ribosome_entry_site	3022633	3022639	.	-	.	ID=id3463;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3022830	3022833	.	+	.	ID=id3464;gbkey=RBS
NC_003888.3	RefSeq	gene	3022836	3023624	.	+	.	ID=gene2781;Dbxref=GeneID:1098205;Name=SCC105.02;gbkey=Gene;gene=SCC105.02;gene_biotype=protein_coding;gene_synonym=SCC105.02;locus_tag=SCO2771
NC_003888.3	RefSeq	CDS	3022836	3023624	.	+	0	ID=cds2733;Parent=gene2781;Dbxref=Genbank:NP_627001.1,GeneID:1098205;Name=NP_627001.1;Note=SCC105.02%2C hypothetical protein%2C len: 262 aa%3B similar to TR:Q9WX05 (EMBL:AL079345) Streptomyces coelicolor hypothetical 28.5 kD protein SCE68.27c%2C 271 aa%3B fasta scores: opt: 315 z-score: 382.9 E(): 6.8e-14%3B 42.8%25 identity in 269 aa overlap;gbkey=CDS;gene=SCC105.02;product=hypothetical protein;protein_id=NP_627001.1;transl_table=11
NC_003888.3	RefSeq	gene	3023634	3024614	.	-	.	ID=gene2782;Dbxref=GeneID:1098206;Name=SCC105.03c;gbkey=Gene;gene=SCC105.03c;gene_biotype=protein_coding;gene_synonym=SCC105.03c;locus_tag=SCO2772
NC_003888.3	RefSeq	CDS	3023634	3024614	.	-	0	ID=cds2734;Parent=gene2782;Dbxref=Genbank:NP_627002.1,GeneID:1098206;Name=NP_627002.1;Note=SCC105.03c%2C possible membrane transport protein%2C len: 326 aa%3B similar to TR:O85699 (EMBL:AF072709) Streptomyces lividans hypothetical 35.5 kD protein%2C 338 aa%3B fasta scores: opt: 702 z-score: 839.7 E(): 0%3B 41.7%25 identity in 324 aa overlap. Contains Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family and match to Prosite entry PS01156 TonB-dependent receptor proteins signature 2. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCC105.03c;product=membrane transport protein;protein_id=NP_627002.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3023673	3024398	.	-	.	ID=id3465;Dbxref=GeneID:1098206;Note=Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family%2C score 1.60%2C E-value 0.00068;gbkey=misc_feature;gene=SCC105.03c
NC_003888.3	RefSeq	sequence_feature	3023787	3023840	.	-	.	ID=id3466;Dbxref=GeneID:1098206;Note=PS01156 TonB-dependent receptor proteins signature 2;gbkey=misc_feature;gene=SCC105.03c
NC_003888.3	RefSeq	ribosome_entry_site	3024618	3024621	.	-	.	ID=id3467;gbkey=RBS
NC_003888.3	RefSeq	gene	3024620	3025492	.	-	.	ID=gene2783;Dbxref=GeneID:1098207;Name=SCC105.04c;gbkey=Gene;gene=SCC105.04c;gene_biotype=protein_coding;gene_synonym=SCC105.04c,tesB2;locus_tag=SCO2773
NC_003888.3	RefSeq	CDS	3024620	3025492	.	-	0	ID=cds2735;Parent=gene2783;Dbxref=Genbank:NP_627003.1,GeneID:1098207;Name=NP_627003.1;Note=SCC105.04c%2C tesB2%2C acyl CoA thioesterase II%2C len: 290 aa%3B highly similar to SW:TESB_ECOLI (EMBL:M63308) Escherichia coli acyl CoA thioesterase II TesB%2C 285 aa%3B fasta scores: opt: 877 z-score: 1015.0 E(): 0%3B 48.6%25 identity in 286 aa overlap;gbkey=CDS;gene=SCC105.04c;product=acyl-CoA thioesterase II;protein_id=NP_627003.1;transl_table=11
NC_003888.3	RefSeq	gene	3025503	3026660	.	-	.	ID=gene2784;Dbxref=GeneID:1098208;Name=acdH2;gbkey=Gene;gene=acdH2;gene_biotype=protein_coding;gene_synonym=acdH2,SCC105.05c;locus_tag=SCO2774
NC_003888.3	RefSeq	CDS	3025503	3026660	.	-	0	ID=cds2736;Parent=gene2784;Dbxref=Genbank:NP_627004.1,GeneID:1098208;Name=NP_627004.1;Note=SCC105.05c%2C acdH2%2C probable acyl-CoA dehydrogenase%2C len: 385 aa%3B similar to TR:Q9X7Y2 (EMBL:AL049485) Streptomyces coelicolor probable acyl-CoA dehydrogenase SC6A5.36%2C 382 aa%3B fasta scores: opt: 1170 z-score: 1351.4 E(): 0%3B 47.9%25 identity in 382 aa overlap. Contains Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and match to Prosite entry PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=CDS;gene=acdH2;product=acyl-CoA dehydrogenase;protein_id=NP_627004.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3025518	3026645	.	-	.	ID=id3468;Dbxref=GeneID:1098208;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 409.10%2C E-value 3.5e-119;gbkey=misc_feature;gene=acdH2
NC_003888.3	RefSeq	sequence_feature	3025578	3025637	.	-	.	ID=id3469;Dbxref=GeneID:1098208;Note=PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=misc_feature;gene=acdH2
NC_003888.3	RefSeq	ribosome_entry_site	3026668	3026672	.	-	.	ID=id3470;gbkey=RBS
NC_003888.3	RefSeq	gene	3026790	3027416	.	-	.	ID=gene2785;Dbxref=GeneID:1098209;Name=SCC105.06c;gbkey=Gene;gene=SCC105.06c;gene_biotype=protein_coding;gene_synonym=SCC105.06c;locus_tag=SCO2775
NC_003888.3	RefSeq	CDS	3026790	3027416	.	-	0	ID=cds2737;Parent=gene2785;Dbxref=Genbank:NP_627005.1,GeneID:1098209;Name=NP_627005.1;Note=SCC105.06%2C possible tetR-family regulatory protein%2C len: 208 aa%3B similar to TR:AAF11696 (EMBL:AE002049) Deinococcus radiodurans transcriptional regulatory protein%2C tetR family DR2148%2C 240 aa%3B fasta scores: opt: 189 z-score: 219.0 E(): 9.3e-05%3B 31.7%25 identity in 205 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SCC105.06c;product=TetR family transcriptional regulator;protein_id=NP_627005.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3027237	3027377	.	-	.	ID=id3471;Dbxref=GeneID:1098209;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 43.90%2C E-value 1.9e-10;gbkey=misc_feature;gene=SCC105.06c
NC_003888.3	RefSeq	ribosome_entry_site	3027500	3027503	.	+	.	ID=id3472;gbkey=RBS
NC_003888.3	RefSeq	gene	3027514	3029130	.	+	.	ID=gene2786;Dbxref=GeneID:1098210;Name=accD1;gbkey=Gene;gene=accD1;gene_biotype=protein_coding;gene_synonym=accD1,SCC105.07;locus_tag=SCO2776
NC_003888.3	RefSeq	CDS	3027514	3029130	.	+	0	ID=cds2738;Parent=gene2786;Dbxref=Genbank:NP_627006.1,GeneID:1098210;Name=NP_627006.1;Note=SCC105.07%2C accD1%2C acetyl/propionyl CoA carboxylase%2C beta subunit%2C len: 538 aa%3B similar to TR:O06165 (EMBL:Z95556) Mycobacterium tuberculosis%2C hypothetical 56.7 kD protein MTCY07A7.08c%2C 529 aa%3B fasta scores: opt: 2749 z-score: 3110.3 E(): 0%3B 76.5%25 identity in 532 aa overlap and to TR:AAF35258 (EMBL:AF059510) Arabidopsis thaliana 3-methylcrotonyl-CoA carboxylase non-biotinylated subunit (EC 6.4.1.4) MccB%2C 587 aa%3B fasta scores: opt: 2185 z-score: 2471.8 E(): 0%3B 60.4%25 identity in 540 aa overlap. Contains Pfam match to entry PF01039 Carboxyl_trans%2C Carboxyl transferase domain;gbkey=CDS;gene=accD1;product=acetyl/propionyl CoA carboxylase subunit beta;protein_id=NP_627006.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3027616	3029127	.	+	.	ID=id3473;Dbxref=GeneID:1098210;Note=Pfam match to entry PF01039 Carboxyl_trans%2C Carboxyl transferase domain%2C score 735.40%2C E-value 2.6e-217;gbkey=misc_feature;gene=accD1
NC_003888.3	RefSeq	ribosome_entry_site	3029153	3029158	.	+	.	ID=id3474;gbkey=RBS
NC_003888.3	RefSeq	gene	3029169	3031109	.	+	.	ID=gene2787;Dbxref=GeneID:1098211;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;gene_synonym=accC,SCC105.08;locus_tag=SCO2777
NC_003888.3	RefSeq	CDS	3029169	3031109	.	+	0	ID=cds2739;Parent=gene2787;Dbxref=Genbank:NP_627007.1,GeneID:1098211;Name=NP_627007.1;Note=SCC105.08%2C accC%2C acetyl/propionyl CoA carboxylase alpha subunit%2C len: 646 aa%3B similar to SW:PCCA_HUMAN (EMBL:X14608) Homo sapiens propionyl-CoA carboxylase alpha chain precursor (EC 6.4.1.3) PccA%2C 703 aa%3B fasta scores: opt: 1539 z-score: 1630.1 E(): 0%3B 43.0%25 identity in 665 aa overlap and to SW:ACCC_ECOLI (EMBL:M79446) Escherichia coli biotin carboxylase (EC 6.3.4.14)%2C alpha subunit of acetyl CoA carboxylase (EC 6.4.1.2) AccC or FabG%2C 449 aa%3B fasta scores: opt: 1439 z-score: 1527.1 E(): 0%3B 47.9%25 identity in 451 aa overlap and to N-terminal region of TR:CAB59603 (EMBL:AL132662) Streptomyces coelicolor pyruvate carboxylase SCF11.26c%2C 1124 aa%3B fasta scores: opt: 1367 z-score: 1204.5 E(): 0%3B 44.3%25 identity in 569 aa overlap. Contains Pfam matches to entries PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase) and Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes and matches to Prosite entries PS00867 Carbamoyl-phosphate synthase subdomain signature 2 and PS00188 Biotin-requiring enzymes attachment site;gbkey=CDS;gene=accC;product=acetyl/propionyl CoA carboxylase subunit alpha;protein_id=NP_627007.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3029178	3030287	.	+	.	ID=id3475;Dbxref=GeneID:1098211;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 605.50%2C E-value 3.1e-178;gbkey=misc_feature;gene=accC
NC_003888.3	RefSeq	sequence_feature	3030030	3030053	.	+	.	ID=id3476;Dbxref=GeneID:1098211;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=accC
NC_003888.3	RefSeq	sequence_feature	3030870	3031073	.	+	.	ID=id3477;Dbxref=GeneID:1098211;Note=Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C score 87.20%2C E-value 3.3e-22;gbkey=misc_feature;gene=accC
NC_003888.3	RefSeq	sequence_feature	3030942	3030995	.	+	.	ID=id3478;Dbxref=GeneID:1098211;Note=PS00188 Biotin-requiring enzymes attachment site;gbkey=misc_feature;gene=accC
NC_003888.3	RefSeq	ribosome_entry_site	3031094	3031099	.	+	.	ID=id3479;Dbxref=GeneID:1098211;gbkey=RBS;gene=accC
NC_003888.3	RefSeq	gene	3031106	3032059	.	+	.	ID=gene2788;Dbxref=GeneID:1098212;Name=hmgL;gbkey=Gene;gene=hmgL;gene_biotype=protein_coding;gene_synonym=hmgL,SCC105.09;locus_tag=SCO2778
NC_003888.3	RefSeq	CDS	3031106	3032059	.	+	0	ID=cds2740;Parent=gene2788;Dbxref=Genbank:NP_627008.1,GeneID:1098212;Name=NP_627008.1;Note=SCC105.09%2C hmgL%2C hydroxymethylglutaryl-CoA lyase%2C len: 317 aa%3B similar to TR:P95639 (EMBL:U41280) Rhodospirillum rubrum hydroxymethylglutaryl-CoA lyase (EC4.1.3.4) HmgL%2C 303 aa%3B fasta scores: opt: 924 z-score: 1043.1 E(): 0%3B 51.2%25 identity in 297 aa overlap and to SW:HMGL_RAT (EMBL:Y10054) Rattus norvegicus hydroxymethylglutaryl-CoA lyase%2C mitochondrial precursor (EC 4.1.3.4) HmgCL%2C 325 aa%3B fasta scores: opt: 983 z-score: 1108.8 E(): 0%3B 52.7%25 identity in 296 aa overlap. Contains Pfam match to entry PF00682 HMGL-like%2C HMGL-like;gbkey=CDS;gene=hmgL;product=hydroxymethylglutaryl-CoA lyase;protein_id=NP_627008.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3031190	3032038	.	+	.	ID=id3480;Dbxref=GeneID:1098212;Note=Pfam match to entry PF00682 HMGL-like%2C HMGL-like%2C score 226.60%2C E-value 3.6e-64;gbkey=misc_feature;gene=hmgL
NC_003888.3	RefSeq	sequence_feature	3031801	3033533	.	+	.	ID=id3481;Note=previously sequenced fragment EMBL:AF142581 Streptomyces coelicolor acyl-CoA dehydrogenase (acdH) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3032065	3033225	.	+	.	ID=gene2789;Dbxref=GeneID:1098213;Name=acdH;gbkey=Gene;gene=acdH;gene_biotype=protein_coding;gene_synonym=acdH,SCC105.10;locus_tag=SCO2779
NC_003888.3	RefSeq	CDS	3032065	3033225	.	+	0	ID=cds2741;Parent=gene2789;Dbxref=Genbank:NP_627009.1,GeneID:1098213;Name=NP_627009.1;Note=SCC105.10%2C acdH%2C acyl-CoA dehydrogenase%2C len: 386 aa%3B identical to previously sequenced TR:Q9XCG6 (EMBL:AF142581) Streptomyces coelicolor acyl-CoA dehydrogenase AcdH%2C 386 aa. Contains Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and matches to Prosite entries PS00072 Acyl-CoA dehydrogenases signature 1 and PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=CDS;gene=acdH;product=acyl-CoA dehydrogenase;protein_id=NP_627009.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3032077	3033204	.	+	.	ID=id3482;Dbxref=GeneID:1098213;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 464.70%2C E-value 7.6e-136;gbkey=misc_feature;gene=acdH
NC_003888.3	RefSeq	sequence_feature	3032434	3032472	.	+	.	ID=id3483;Dbxref=GeneID:1098213;Note=PS00072 Acyl-CoA dehydrogenases signature 1;gbkey=misc_feature;gene=acdH
NC_003888.3	RefSeq	sequence_feature	3033085	3033144	.	+	.	ID=id3484;Dbxref=GeneID:1098213;Note=PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=misc_feature;gene=acdH
NC_003888.3	RefSeq	gene	3033355	3034404	.	+	.	ID=gene2790;Dbxref=GeneID:1098214;Name=SCC105.11;gbkey=Gene;gene=SCC105.11;gene_biotype=protein_coding;gene_synonym=SCC105.11;locus_tag=SCO2780
NC_003888.3	RefSeq	CDS	3033355	3034404	.	+	0	ID=cds2742;Parent=gene2790;Dbxref=Genbank:NP_627010.1,GeneID:1098214;Name=NP_627010.1;Note=SCC105.11%2C possible hypothetical protein%2C len: 349 aa%3B similar to TR:CAB53324 (EMBL:AL109974) Streptomyces coelicolor  iron-siderophore binding lipoprotein SCF34.13c%2C 350 aa%3B fasta scores: opt: 288 z-score: 297.2 E(): 4.1e-09%3B 28.3%25 identity in 332 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCC105.11;product=hypothetical protein;protein_id=NP_627010.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3034421	3034424	.	+	.	ID=id3485;gbkey=RBS
NC_003888.3	RefSeq	gene	3034632	3035477	.	+	.	ID=gene2791;Dbxref=GeneID:1098215;Name=SCC105.12;gbkey=Gene;gene=SCC105.12;gene_biotype=protein_coding;gene_synonym=SCC105.12;locus_tag=SCO2781
NC_003888.3	RefSeq	CDS	3034632	3035477	.	+	0	ID=cds2743;Parent=gene2791;Dbxref=Genbank:NP_627011.1,GeneID:1098215;Name=NP_627011.1;Note=SCC105.12%2C hypothetical protein%2C len: 281 aa%3B similar to TR:CAB56689 (EMBL:AL121596) Streptomyces coelicolor hypothetical 28.7 kD protein%2C 259 aa%3B fasta scores: opt: 261 z-score: 302.6 E(): 2e-09%3B 34.9%25 identity in 255 aa overlap;gbkey=CDS;gene=SCC105.12;product=hypothetical protein;protein_id=NP_627011.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3035628	3035633	.	+	.	ID=id3486;gbkey=RBS
NC_003888.3	RefSeq	gene	3035641	3037083	.	+	.	ID=gene2792;Dbxref=GeneID:1098216;Name=SCC105.13;gbkey=Gene;gene=SCC105.13;gene_biotype=protein_coding;gene_synonym=SCC105.13;locus_tag=SCO2782
NC_003888.3	RefSeq	CDS	3035641	3037083	.	+	0	ID=cds2744;Parent=gene2792;Dbxref=Genbank:NP_627012.1,GeneID:1098216;Name=NP_627012.1;Note=SCC105.13%2C probable pyridoxal-dependent decarboxylase%2C len: 480 aa%3B similar to SW:RHSB_RHIME (EMBL:AF110737) Rhizobium meliloti L-2%2C4-diaminobutyrate decarboxylase (EC 4.1.1.-) RhsB%2C 495 aa%3B fasta scores: opt: 1111 z-score: 1326.2 E(): 0%3B 41.9%25 identity in 458 aa overlap. Contains Pfam match to entry PF00282 pyridoxal_deC%2C Pyridoxal-dependent decarboxylase conserved domain;gbkey=CDS;gene=SCC105.13;product=pyridoxal-dependent decarboxylase;protein_id=NP_627012.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3036055	3036849	.	+	.	ID=id3487;Dbxref=GeneID:1098216;Note=Pfam match to entry PF00282 pyridoxal_deC%2C Pyridoxal-dependent decarboxylase conserved domain%2C score 157.60%2C E-value 4.6e-45;gbkey=misc_feature;gene=SCC105.13
NC_003888.3	RefSeq	gene	3037106	3038347	.	+	.	ID=gene2793;Dbxref=GeneID:1098217;Name=SCC105.14;gbkey=Gene;gene=SCC105.14;gene_biotype=protein_coding;gene_synonym=SCC105.14;locus_tag=SCO2783
NC_003888.3	RefSeq	CDS	3037106	3038347	.	+	0	ID=cds2745;Parent=gene2793;Dbxref=Genbank:NP_627013.1,GeneID:1098217;Name=NP_627013.1;Note=SCC105.14%2C probable monooxygenase%2C len: 413 aa%3B similar to SW:RHSE_RHIME (EMBL:AF110737) Rhizobium meliloti rhizobactin siderophore biosynthesis protein RhsE (EC 1.-.-.-)%2C 454 aa%3B fasta scores: opt: 616 z-score: 727.2 E(): 0%3B 42.3%25 identity in 430 aa overlap and to SW:IUCD_ECOLI (EMBL:M18968) Escherichia coli L-lysine 6-monooxygenase (EC 1.13.12.10) IucD%2C 425 aa%3B fasta scores: opt: 802 z-score: 946.5 E(): 0%3B 31.6%25 identity in 414 aa overlap;gbkey=CDS;gene=SCC105.14;product=monooxygenase;protein_id=NP_627013.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3038331	3038335	.	+	.	ID=id3488;Dbxref=GeneID:1098217;gbkey=RBS;gene=SCC105.14
NC_003888.3	RefSeq	gene	3038344	3038898	.	+	.	ID=gene2794;Dbxref=GeneID:1098218;Name=SCC105.15;gbkey=Gene;gene=SCC105.15;gene_biotype=protein_coding;gene_synonym=SCC105.15;locus_tag=SCO2784
NC_003888.3	RefSeq	CDS	3038344	3038898	.	+	0	ID=cds2746;Parent=gene2794;Dbxref=Genbank:NP_627014.1,GeneID:1098218;Name=NP_627014.1;Note=SCC105.15%2C probable aceytltranferase%2C len: 184 aa%3B similar to SW:RHSD_RHIME (EMBL:AF110737) Rhizobium meliloti rhizobactin siderophore biosynthesis protein RhsD%2C 196 aa%3B fasta scores: opt: 257 z-score: 326.7 E(): 9.2e-11%3B 33.7%25 identity in 172 aa overlap and to TR:AAD46626 (EMBL:AF162771) Pseudomonas aeruginosa aminoglycoside 6'-N-acetyltransferase Aac%2C 193 aa%3B fasta scores: opt: 175 z-score: 226.3 E(): 3.6e-05%3B 28.2%25 identity in 174 aa overlap;gbkey=CDS;gene=SCC105.15;product=aceytltranferase;protein_id=NP_627014.1;transl_table=11
NC_003888.3	RefSeq	gene	3038895	3040682	.	+	.	ID=gene2795;Dbxref=GeneID:1098219;Name=SCC105.16;gbkey=Gene;gene=SCC105.16;gene_biotype=protein_coding;gene_synonym=SCC105.16;locus_tag=SCO2785
NC_003888.3	RefSeq	CDS	3038895	3040682	.	+	0	ID=cds2747;Parent=gene2795;Dbxref=Genbank:NP_627015.1,GeneID:1098219;Name=NP_627015.1;Note=SCC105.16%2C hypothetical protein%2C len: 595 aa%3B similar to SW:RHSF_RHIME (EMBL:AF110737) Rhizobium meliloti rhizobactin siderophore biosynthesis protein RhsF%2C 601 aa%3B fasta scores: opt: 1094 z-score: 1325.6 E(): 0%3B 32.4%25 identity in 592 aa overlap and to TR:P94255 (EMBL:U61153) Bordetella bronchiseptica AlcC%2C 618 aa%3B fasta scores: opt: 2037 z-score: 2470.2 E(): 0%3B 51.5%25 identity in 592 aa overlap;gbkey=CDS;gene=SCC105.16;product=hypothetical protein;protein_id=NP_627015.1;transl_table=11
NC_003888.3	RefSeq	gene	3040752	3042359	.	-	.	ID=gene2796;Dbxref=GeneID:1098220;Name=hexA;gbkey=Gene;gene=hexA;gene_biotype=protein_coding;gene_synonym=hexA,SCC105.17c;locus_tag=SCO2786
NC_003888.3	RefSeq	CDS	3040752	3042359	.	-	0	ID=cds2748;Parent=gene2796;Dbxref=Genbank:NP_627016.1,GeneID:1098220;Name=NP_627016.1;Note=SCC105.17c%2C hexA%2C beta-N-acetylhexosaminidase precursor%2C len: 535 aa%3B highly similar to TR:O85361 (EMBL:AF063001) Streptomyces plicatus B-N-acetylhexosaminidase%2C Hex%2C 561 aa%3B fasta scores: opt: 2991 z-score: 3318.1 E(): 0%3B 93.2%25 identity in 469 aa overlap and to TR:BAA8876 (EMBL:AB015350) Streptomyces thermoviolaceus beta-N-acetylglucosaminidase precursor NagB%2C 541 aa%3B fasta scores: opt: 2856 z-score: 3168.6 E(): 0%3B 76.7%25 identity in 537 aa overlap. Contains Pfam match to entry PF00728 Glyco_hydro_20%2C Glycosyl hydrolase family 20 and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=hexA;product=beta-N-acetylhexosaminidase;protein_id=NP_627016.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3041502	3042002	.	-	.	ID=id3489;Dbxref=GeneID:1098220;Note=Pfam match to entry PF00728 Glyco_hydro_20%2C Glycosyl hydrolase family 20%2C score 142.50%2C E-value 7.3e-39;gbkey=misc_feature;gene=hexA
NC_003888.3	RefSeq	ribosome_entry_site	3042365	3042370	.	-	.	ID=id3490;gbkey=RBS
NC_003888.3	RefSeq	gene	3042474	3043370	.	+	.	ID=gene2797;Dbxref=GeneID:1098221;Name=SCC105.18;gbkey=Gene;gene=SCC105.18;gene_biotype=protein_coding;gene_synonym=SCC105.18;locus_tag=SCO2787
NC_003888.3	RefSeq	CDS	3042474	3043370	.	+	0	ID=cds2749;Parent=gene2797;Dbxref=Genbank:NP_627017.1,GeneID:1098221;Name=NP_627017.1;Note=SCC105.18%2C hypothetical protein%2C len: 298 aa%3B similar to TR:Q9RDQ8 (EMBL:AL133423) Streptomyces coelicolor hypothetical 31.7 kD protein SC4A7.04%2C 295 aa%3B fasta scores: opt: 556 z-score: 623.0 E(): 2.9e-27%3B 37.4%25 identity in 294 aa overlap;gbkey=CDS;gene=SCC105.18;product=hypothetical protein;protein_id=NP_627017.1;transl_table=11
NC_003888.3	RefSeq	gene	3043459	3043716	.	+	.	ID=gene2798;Dbxref=GeneID:1098222;Name=SCC105.19;gbkey=Gene;gene=SCC105.19;gene_biotype=protein_coding;gene_synonym=SCC105.19;locus_tag=SCO2788
NC_003888.3	RefSeq	CDS	3043459	3043716	.	+	0	ID=cds2750;Parent=gene2798;Dbxref=Genbank:NP_627018.1,GeneID:1098222;Name=NP_627018.1;Note=SCC105.19%2C unknown%2C len: 85 aa;gbkey=CDS;gene=SCC105.19;product=hypothetical protein;protein_id=NP_627018.1;transl_table=11
NC_003888.3	RefSeq	gene	3043786	3045603	.	+	.	ID=gene2799;Dbxref=GeneID:1098223;Name=glmS2;gbkey=Gene;gene=glmS2;gene_biotype=protein_coding;gene_synonym=glmS2,SCC105.20;locus_tag=SCO2789
NC_003888.3	RefSeq	CDS	3043786	3045603	.	+	0	ID=cds2751;Parent=gene2799;Dbxref=Genbank:NP_627019.1,GeneID:1098223;Name=NP_627019.1;Note=SCC105.20%2C glmS2%2C glucosamine-fructose-6-phosphate aminotransferase%2C len: 605 aa%3B similar to SW:GLMS_ECOLI (EMBL:X01631) Escherichia coli glucosamine-fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) GlmS%2C 608 aa%3B fasta scores: opt: 1617 z-score: 1815.6 E(): 0%3B 44.1%25 identity in 612 aa overlap and highly similar to TR:BAA86263 (EMBL:AB023785) Streptomyces griseus ORF3 (fragment)%2C 589 aa%3B fasta scores: opt: 3364 z-score: 3776.2 E(): 0%3B 87.6%25 identity in 589 aa overlap and also to SW:GLMS_STRCO (EMBL:AL031317) Streptomyces coelicolor GlmS1%2C probable glucosamine--fructose-6-phosphate aminotransferase SC6G4.18%2C 615 aa%3B fasta scores: opt: 1480 z-score: 1526.7 E(): 0%3B 43.8%25 identity in 621 aa overlap. Contains Pfam matches to entries PF00310 GATase_2%2C Glutamine amidotransferases class-II and 2x PF01380 SIS%2C SIS domain;gbkey=CDS;gene=glmS2;product=glucosamine-fructose-6-phosphate aminotransferase;protein_id=NP_627019.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3043789	3044331	.	+	.	ID=id3491;Dbxref=GeneID:1098223;Note=Pfam match to entry PF00310 GATase_2%2C Glutamine amidotransferases class-II%2C score 264.50%2C E-value 1.3e-89;gbkey=misc_feature;gene=glmS2
NC_003888.3	RefSeq	sequence_feature	3044647	3045051	.	+	.	ID=id3492;Dbxref=GeneID:1098223;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 147.70%2C E-value 2e-40;gbkey=misc_feature;gene=glmS2
NC_003888.3	RefSeq	sequence_feature	3045160	3045558	.	+	.	ID=id3493;Dbxref=GeneID:1098223;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 88.50%2C E-value 1.3e-22;gbkey=misc_feature;gene=glmS2
NC_003888.3	RefSeq	gene	3045619	3046146	.	-	.	ID=gene2800;Dbxref=GeneID:1098224;Name=SCC105.21c;gbkey=Gene;gene=SCC105.21c;gene_biotype=protein_coding;gene_synonym=SCC105.21c;locus_tag=SCO2790
NC_003888.3	RefSeq	CDS	3045619	3046146	.	-	0	ID=cds2752;Parent=gene2800;Dbxref=Genbank:NP_627020.1,GeneID:1098224;Name=NP_627020.1;Note=SCC105.21c%2C hypothetical protein%2C len: 175 aa%3B highly similar to TR:BAA86264 (EMBL:AB023785) Streptomyces griseus ORF2%2C 173 aa%3B fasta scores: opt: 998 z-score: 1157.6 E(): 0%3B 82.9%25 identity in 175 aa overlap;gbkey=CDS;gene=SCC105.21c;product=hypothetical protein;protein_id=NP_627020.1;transl_table=11
NC_003888.3	RefSeq	gene	3046452	3046763	.	-	.	ID=gene2801;Dbxref=GeneID:1098225;Name=SCC105.22c;gbkey=Gene;gene=SCC105.22c;gene_biotype=protein_coding;gene_synonym=SCC105.22c;locus_tag=SCO2791
NC_003888.3	RefSeq	CDS	3046452	3046763	.	-	0	ID=cds2753;Parent=gene2801;Dbxref=Genbank:NP_627021.1,GeneID:1098225;Name=NP_627021.1;Note=SCC105.22c%2C unknown%2C len: 103 aa;gbkey=CDS;gene=SCC105.22c;product=hypothetical protein;protein_id=NP_627021.1;transl_table=11
NC_003888.3	RefSeq	gene	3047135	3048331	.	+	.	ID=gene2802;Dbxref=GeneID:1098226;Name=adpA;gbkey=Gene;gene=adpA;gene_biotype=protein_coding;gene_synonym=adpA,SCC105.23;locus_tag=SCO2792
NC_003888.3	RefSeq	CDS	3047135	3048331	.	+	0	ID=cds2754;Parent=gene2802;Dbxref=Genbank:NP_627022.1,GeneID:1098226;Name=NP_627022.1;Note=SCC105.23%2C adpA%2C araC-family transcriptional regulator%2C len: 398 aa%3B highly similar to TR:BAA86265 (EMBL:AB023785) Streptomyces griseus AdpA%2C 405 aa%3B fasta scores: opt: 2219 z-score: 2270.5 E(): 0%3B 84.4%25 identity in 410 aa overlap and to TR:Q9XA73 (EMBL:AL096822) Streptomyces coelicolor araC-family transcriptional regulator SCGD3.05%2C 334 aa%3B fasta scores: opt: 878 z-score: 904.2 E(): 0%3B 45.7%25 identity in 313 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and match to Prosite entry PS00041 Bacterial regulatory proteins%2C araC family signature. Contains possible helix-turn-helix motif;gbkey=CDS;gene=adpA;product=AraC family transcription regulator;protein_id=NP_627022.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3047807	3047809	.	+	.	ID=id3494;Dbxref=GeneID:1098226;Note=TTA Leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=adpA
NC_003888.3	RefSeq	sequence_feature	3047876	3048136	.	+	.	ID=id3495;Dbxref=GeneID:1098226;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 75.80%2C E-value 8.8e-19;gbkey=misc_feature;gene=adpA
NC_003888.3	RefSeq	sequence_feature	3047987	3048115	.	+	.	ID=id3496;Dbxref=GeneID:1098226;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=adpA
NC_003888.3	RefSeq	stem_loop	3048352	3048432	.	+	.	ID=id3497;Note=26633 GAACGCCGGACGGGCCGGAGCGTG-CCCGTCCGGC 26666-26680 GCCGGGCGGGGCACACTCAG-CCCGTCCGGCGTTC 26713. Score 54: 30/33 (90%25) matches%2C 2 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	sequence_feature	3048563	3050420	.	+	.	ID=id3498;Note=previously sequenced DNA fragment. EMBL:AB036424 Streptomyces coelicolor A3(2) adpA%2C ornA%2C orf5-h genes for AdpA homolog%2C oligoribonuclease%2C transcriptional regulator%2C partial and complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3048673	3049275	.	+	.	ID=gene2803;Dbxref=GeneID:1098227;Name=2SCC13.01;gbkey=Gene;gene=2SCC13.01;gene_biotype=protein_coding;gene_synonym=2SCC13.01,ornA;locus_tag=SCO2793
NC_003888.3	RefSeq	CDS	3048673	3049275	.	+	0	ID=cds2755;Parent=gene2803;Dbxref=Genbank:NP_627023.1,GeneID:1098227;Name=NP_627023.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;gene=2SCC13.01;product=oligoribonuclease;protein_id=NP_627023.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3048685	3049203	.	+	.	ID=id3499;Dbxref=GeneID:1098227;Note=Pfam match to entry PF00929 Exonuclease%2C Exonuclease%2C score 76.80%2C E-value 4.6e-19;gbkey=misc_feature;gene=2SCC13.01
NC_003888.3	RefSeq	gene	3049397	3049469	.	+	.	ID=gene2804;Dbxref=GeneID:3240019;Name=SCOt19;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt19
NC_003888.3	RefSeq	tRNA	3049397	3049469	.	+	.	ID=rna25;Parent=gene2804;Dbxref=GeneID:3240019;Note=tRNA His anticodon GTG%2C Cove score 71.04;gbkey=tRNA;product=tRNA-His
NC_003888.3	RefSeq	exon	3049397	3049469	.	+	.	ID=id3500;Parent=rna25;Dbxref=GeneID:3240019;Note=tRNA His anticodon GTG%2C Cove score 71.04;gbkey=tRNA;product=tRNA-His
NC_003888.3	RefSeq	stem_loop	3049476	3049513	.	+	.	ID=id3501;Note=possible stem loop. Score 57: 18/18 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3049837	3050892	.	-	.	ID=gene2805;Dbxref=GeneID:1098228;Name=2SCC13.02c;gbkey=Gene;gene=2SCC13.02c;gene_biotype=protein_coding;gene_synonym=2SCC13.02c;locus_tag=SCO2794
NC_003888.3	RefSeq	CDS	3049837	3050892	.	-	0	ID=cds2756;Parent=gene2805;Dbxref=Genbank:NP_627024.1,GeneID:1098228;Name=NP_627024.1;Note=2SCC13.02c%2C lacI-family transcriptional regulatory protein%2C len: 351 aa%3B highly similar to TR:Q9X9R3 (EMBL:AJ009798) Streptomyces reticuli CebR protein%2C 350 aa%3B fasta scores: opt: 2011 z-score: 2174.4 E(): 0%3B 89.4%25 identity in 350 aa overlap and C-terminal region identical to TR:BAB03462 (EMBL:AB036424) Streptomyces coelicolor transcriptional regulator (fragment) ORF5-H%2C 193 aa. Contains Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins%2C lacI family signature. Also contains a possible helix-turn-helix motif at residues 14..35 (+6.05 SD);gbkey=CDS;gene=2SCC13.02c;product=LacI family transcriptional regulator;protein_id=NP_627024.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3049948	3050685	.	-	.	ID=id3502;Dbxref=GeneID:1098228;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 159.90%2C E-value 4.3e-44;gbkey=misc_feature;gene=2SCC13.02c
NC_003888.3	RefSeq	sequence_feature	3050776	3050859	.	-	.	ID=id3503;Dbxref=GeneID:1098228;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 35.50%2C E-value 1.5e-08;gbkey=misc_feature;gene=2SCC13.02c
NC_003888.3	RefSeq	sequence_feature	3050791	3050847	.	-	.	ID=id3504;Dbxref=GeneID:1098228;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=2SCC13.02c
NC_003888.3	RefSeq	ribosome_entry_site	3050896	3050899	.	-	.	ID=id3505;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3051247	3051252	.	+	.	ID=id3506;gbkey=RBS
NC_003888.3	RefSeq	gene	3051258	3052583	.	+	.	ID=gene2806;Dbxref=GeneID:1098229;Name=2SCC13.03;gbkey=Gene;gene=2SCC13.03;gene_biotype=protein_coding;gene_synonym=2SCC13.03;locus_tag=SCO2795
NC_003888.3	RefSeq	CDS	3051258	3052583	.	+	0	ID=cds2757;Parent=gene2806;Dbxref=Genbank:NP_627025.1,GeneID:1098229;Name=NP_627025.1;Note=2SCC13.03%2C probable sugar binding hypothetical protein%2C len: 441 aa%3B highly similar to TR:Q9X9R7 (EMBL:AJ009797) Streptomyces reticuli Cbp protein precursor (fragment) CebE%2C 444 aa%3B fasta scores: opt: 1490 z-score: 1672.5 E(): 0%3B 51.2%25 identity in 445 aa overlap and similar to SW:LACE_AGRRD (EMBL:X66596) Agrobacterium radiobacter Lactose-binding protein precursor LacE%2C 422 aa%3B fasta scores: opt: 263 z-score: 298.4 E(): 4.1e-09%3B 23.1%25 identity in 398 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCC13.03;product=sugar binding hypothetical protein;protein_id=NP_627025.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3051312	3051344	.	+	.	ID=id3507;Dbxref=GeneID:1098229;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCC13.03
NC_003888.3	RefSeq	sequence_feature	3051708	3052568	.	+	.	ID=id3508;Dbxref=GeneID:1098229;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 35.20%2C E-value 7.1e-09;gbkey=misc_feature;gene=2SCC13.03
NC_003888.3	RefSeq	ribosome_entry_site	3052574	3052577	.	+	.	ID=id3509;Dbxref=GeneID:1098229;gbkey=RBS;gene=2SCC13.03
NC_003888.3	RefSeq	gene	3052589	3053602	.	+	.	ID=gene2807;Dbxref=GeneID:1098230;Name=2SCC13.04;gbkey=Gene;gene=2SCC13.04;gene_biotype=protein_coding;gene_synonym=2SCC13.04;locus_tag=SCO2796
NC_003888.3	RefSeq	CDS	3052589	3053602	.	+	0	ID=cds2758;Parent=gene2807;Dbxref=Genbank:NP_627026.1,GeneID:1098230;Name=NP_627026.1;Note=2SCC13.04%2C probable cellobiose transport permease%2C len: 337 aa%3B highly similar to TR:Q9X9R6 (EMBL:AJ009797) Streptomyces reticuli permease CebF protein%2C 305 aa%3B fasta scores: opt: 1416 z-score: 1722.4 E(): 0%3B 67.9%25 identity in 296 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCC13.04;product=cellobiose transport permease;protein_id=NP_627026.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3053240	3053482	.	+	.	ID=id3510;Dbxref=GeneID:1098230;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 54.20%2C E-value 2.8e-12;gbkey=misc_feature;gene=2SCC13.04
NC_003888.3	RefSeq	sequence_feature	3053243	3053329	.	+	.	ID=id3511;Dbxref=GeneID:1098230;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=2SCC13.04
NC_003888.3	RefSeq	ribosome_entry_site	3053601	3053606	.	+	.	ID=id3512;gbkey=RBS
NC_003888.3	RefSeq	gene	3053615	3054526	.	+	.	ID=gene2808;Dbxref=GeneID:1098231;Name=2SCC13.05;gbkey=Gene;gene=2SCC13.05;gene_biotype=protein_coding;gene_synonym=2SCC13.05;locus_tag=SCO2797
NC_003888.3	RefSeq	CDS	3053615	3054526	.	+	0	ID=cds2759;Parent=gene2808;Dbxref=Genbank:NP_627027.1,GeneID:1098231;Name=NP_627027.1;Note=2SCC13.05%2C probable cellobiose transport permease%2C len: 303 aa%3B highly similar to TR:Q9X9R5 (EMBL:AJ009797) Streptomyces reticuli permease CebG protein%2C 275 aa%3B fasta scores: opt: 1262 z-score: 1477.0 E(): 0%3B 67.8%25 identity in 276 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCC13.05;product=cellobiose transport permease;protein_id=NP_627027.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3054173	3054397	.	+	.	ID=id3513;Dbxref=GeneID:1098231;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 65.80%2C E-value 8.9e-16;gbkey=misc_feature;gene=2SCC13.05
NC_003888.3	RefSeq	sequence_feature	3054176	3054262	.	+	.	ID=id3514;Dbxref=GeneID:1098231;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=2SCC13.05
NC_003888.3	RefSeq	ribosome_entry_site	3054659	3054662	.	+	.	ID=id3515;gbkey=RBS
NC_003888.3	RefSeq	gene	3054670	3056109	.	+	.	ID=gene2809;Dbxref=GeneID:1098232;Name=2SCC13.06;gbkey=Gene;gene=2SCC13.06;gene_biotype=protein_coding;gene_synonym=2SCC13.06;locus_tag=SCO2798
NC_003888.3	RefSeq	CDS	3054670	3056109	.	+	0	ID=cds2760;Parent=gene2809;Dbxref=Genbank:NP_627028.1,GeneID:1098232;Name=NP_627028.1;Note=2SCC13.06%2C probable cellobiose hydrolase%2C len: 479 aa%3B highly similar to TR:Q59976 (EMBL:Z29625) Streptomyces sp. beta-glucosidase (EC 3.2.1.21) (cellobiose) Bgl3%2C 479 aa%3B fasta scores: opt: 2214 z-score: 2511.6 E(): 0%3B 65.5%25 identity in 472 aa overlap. Contains Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1 and matches to Prosite entries PS00653 Glycosyl hydrolases family 1 N-terminal signature and PS00572 Glycosyl hydrolases family 1 active site;gbkey=CDS;gene=2SCC13.06;product=cellobiose hydrolase;protein_id=NP_627028.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3054694	3056097	.	+	.	ID=id3516;Dbxref=GeneID:1098232;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 690.50%2C E-value 8.4e-204;gbkey=misc_feature;gene=2SCC13.06
NC_003888.3	RefSeq	sequence_feature	3054718	3054762	.	+	.	ID=id3517;Dbxref=GeneID:1098232;Note=PS00653 Glycosyl hydrolases family 1 N-terminal signature;gbkey=misc_feature;gene=2SCC13.06
NC_003888.3	RefSeq	sequence_feature	3055792	3055818	.	+	.	ID=id3518;Dbxref=GeneID:1098232;Note=PS00572 Glycosyl hydrolases family 1 active site;gbkey=misc_feature;gene=2SCC13.06
NC_003888.3	RefSeq	gene	3056184	3057653	.	-	.	ID=gene2810;Dbxref=GeneID:1098233;Name=2SCC13.07c;gbkey=Gene;gene=2SCC13.07c;gene_biotype=protein_coding;gene_synonym=2SCC13.07c;locus_tag=SCO2799
NC_003888.3	RefSeq	CDS	3056184	3057653	.	-	0	ID=cds2761;Parent=gene2810;Dbxref=Genbank:NP_627029.1,GeneID:1098233;Name=NP_627029.1;Note=2SCC13.07c%2C possible  sugar hydrolase%2C len: 489 aa%3B similar to the C-terminal region of TR:Q9UWR7 (EMBL:AB024740) Pyrococcus kodakaraensis chitinase PK-ChiA%2C 1215 aa%3B fasta scores: opt: 671 z-score: 561.2 E(): 9.4e-24%3B 31.6%25 identity in 471 aa overlap. Contains Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain and 3x degenerate repeat: PAPT(P/G)TP. Also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCC13.07c;product=sugar hydrolase;protein_id=NP_627029.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3057093	3057188	.	-	.	ID=id3519;Dbxref=GeneID:1098233;Note=3x degenerate repeat translated in 2SCC13.07c;gbkey=repeat_region;gene=2SCC13.07c
NC_003888.3	RefSeq	sequence_feature	3057240	3057536	.	-	.	ID=id3520;Dbxref=GeneID:1098233;Note=Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain%2C score 63.90%2C E-value 2.8e-17;gbkey=misc_feature;gene=2SCC13.07c
NC_003888.3	RefSeq	sequence_feature	3057813	3057818	.	+	.	ID=id3521;Note=AseI site matched ATTAAT. Divides AseI-C and AseI-E genomic restriction fragments~Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	3057813	3057818	.	-	.	ID=id3522;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3057814	3059226	.	-	.	ID=gene2811;Dbxref=GeneID:1098234;Name=2SCC13.08c;gbkey=Gene;gene=2SCC13.08c;gene_biotype=protein_coding;gene_synonym=2SCC13.08c;locus_tag=SCO2800
NC_003888.3	RefSeq	CDS	3057814	3059226	.	-	0	ID=cds2762;Parent=gene2811;Dbxref=Genbank:NP_627030.1,GeneID:1098234;Name=NP_627030.1;Note=2SCC13.08c%2C probable two component system histidine kinase%2C len: 470 aa%3B similar to many other Streptomyces coelicolor two component system histidine kinases%2C e.g. TR:Q9RK59 (EMBL:AL132662)  histidine kinase SCF11.31c%2C 442 aa%3B fasta scores: opt: 1185 z-score: 1227.7 E(): 0%3B 47.1%25 identity in 448 aa overlap. Contains Pfam matches to entries PF00672 DUF5%2C HAMP domain and PF00512 signal%2C Histidine kinase. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCC13.08c;product=two component system histidine kinase;protein_id=NP_627030.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3057922	3058518	.	-	.	ID=id3523;Dbxref=GeneID:1098234;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 10.50%2C E-value 1.1e-05;gbkey=misc_feature;gene=2SCC13.08c
NC_003888.3	RefSeq	sequence_feature	3058558	3058767	.	-	.	ID=id3524;Dbxref=GeneID:1098234;Note=Pfam match to entry PF00672 DUF5%2C HAMP domain%2C score 57.70%2C E-value 2.4e-13;gbkey=misc_feature;gene=2SCC13.08c
NC_003888.3	RefSeq	gene	3059223	3059936	.	-	.	ID=gene2812;Dbxref=GeneID:1098235;Name=2SCC13.09c;gbkey=Gene;gene=2SCC13.09c;gene_biotype=protein_coding;gene_synonym=2SCC13.09c;locus_tag=SCO2801
NC_003888.3	RefSeq	CDS	3059223	3059936	.	-	0	ID=cds2763;Parent=gene2812;Dbxref=Genbank:NP_627031.1,GeneID:1098235;Name=NP_627031.1;Note=2SCC13.09c%2C probable two component system response regulator%2C len: 234 aa%3B similar to many other Streptomyces coelicolor two component system response regulators%2C e.g. TR:Q9RK58 (EMBL:AL132662)  response regulator SCF11.32c%2C 238 aa%3B fasta scores: opt: 894 z-score: 1031.1 E(): 0%3B 60.6%25 identity in 226 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=2SCC13.09c;product=two component system response regulator;protein_id=NP_627031.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3059235	3059238	.	-	.	ID=id3525;Dbxref=GeneID:1098235;gbkey=RBS;gene=2SCC13.09c
NC_003888.3	RefSeq	sequence_feature	3059262	3059477	.	-	.	ID=id3526;Dbxref=GeneID:1098235;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 88.30%2C E-value 4.4e-25;gbkey=misc_feature;gene=2SCC13.09c
NC_003888.3	RefSeq	sequence_feature	3059592	3059924	.	-	.	ID=id3527;Dbxref=GeneID:1098235;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 124.90%2C E-value 1.5e-33;gbkey=misc_feature;gene=2SCC13.09c
NC_003888.3	RefSeq	ribosome_entry_site	3060030	3060033	.	+	.	ID=id3528;gbkey=RBS
NC_003888.3	RefSeq	gene	3060038	3060619	.	+	.	ID=gene2813;Dbxref=GeneID:1098236;Name=2SCC13.10;gbkey=Gene;gene=2SCC13.10;gene_biotype=protein_coding;gene_synonym=2SCC13.10;locus_tag=SCO2802
NC_003888.3	RefSeq	CDS	3060038	3060619	.	+	0	ID=cds2764;Parent=gene2813;Dbxref=Genbank:NP_627032.1,GeneID:1098236;Name=NP_627032.1;Note=2SCC13.10%2C possible hypothetical protein%2C len: 193 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCC13.10;product=hypothetical protein;protein_id=NP_627032.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3060230	3060388	.	+	.	ID=id3529;Dbxref=GeneID:1098236;Note=high content region in proline%2C serine and alanine amino acids residues. Also high content in G+C (84.27%25);gbkey=misc_feature;gene=2SCC13.10
NC_003888.3	RefSeq	gene	3060648	3061517	.	-	.	ID=gene2814;Dbxref=GeneID:1098237;Name=2SCC13.11c;gbkey=Gene;gene=2SCC13.11c;gene_biotype=protein_coding;gene_synonym=2SCC13.11c;locus_tag=SCO2803
NC_003888.3	RefSeq	CDS	3060648	3061517	.	-	0	ID=cds2765;Parent=gene2814;Dbxref=Genbank:NP_627033.1,GeneID:1098237;Name=NP_627033.1;Note=2SCC13.11c%2C hypothetical protein%2C len: 289 aa%3B similar to TR:CAB95777 (EMBL:AL359949) Streptomyces coelicolor hypothetical 29.6 kDa protein 2SCG61.02c%2C 281 aa%3B fasta scores: opt: 1064 z-score: 1175.8 E(): 0%3B 61.4%25 identity in 267 aa overlap;gbkey=CDS;gene=2SCC13.11c;product=hypothetical protein;protein_id=NP_627033.1;transl_table=11
NC_003888.3	RefSeq	gene	3061566	3061961	.	-	.	ID=gene2815;Dbxref=GeneID:1098238;Name=2SCC13.12c;gbkey=Gene;gene=2SCC13.12c;gene_biotype=protein_coding;gene_synonym=2SCC13.12c;locus_tag=SCO2804
NC_003888.3	RefSeq	CDS	3061566	3061961	.	-	0	ID=cds2766;Parent=gene2815;Dbxref=Genbank:NP_627034.1,GeneID:1098238;Name=NP_627034.1;Note=2SCC13.12c%2C hypothetical protein%2C len: 131 aa%3B similar to TR:O86827 (EMBL:AL031225) Streptomyces coelicolor hypothetical 15.7 kDa protein SC8B7.06c%2C 152 aa%3B fasta scores: opt: 232 z-score: 266.8 E(): 2.4e-07%3B 41.6%25 identity in 113 aa overlap;gbkey=CDS;gene=2SCC13.12c;product=hypothetical protein;protein_id=NP_627034.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3061968	3061973	.	-	.	ID=id3530;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3062218	3062221	.	+	.	ID=id3531;gbkey=RBS
NC_003888.3	RefSeq	gene	3062230	3063669	.	+	.	ID=gene2816;Dbxref=GeneID:1098239;Name=2SCC13.13;gbkey=Gene;gene=2SCC13.13;gene_biotype=protein_coding;gene_synonym=2SCC13.13;locus_tag=SCO2805
NC_003888.3	RefSeq	CDS	3062230	3063669	.	+	0	ID=cds2767;Parent=gene2816;Dbxref=Genbank:NP_627035.1,GeneID:1098239;Name=NP_627035.1;Note=2SCC13.13%2C hypothetical protein%2C len: 479 aa%3B similar to SW:SP15_STRGR (EMBL:M32687) Streptomyces griseus sporulation related protein ORF1590%2C 529 aa%3B fasta scores: opt: 413 z-score: 469.3 E(): 1.2e-18%3B 30.4%25 identity in 326 aa overlap. Contains 2x conserved repeat: YETHD and 3x degenerate repeat: D(T/A)QD(V/L);gbkey=CDS;gene=2SCC13.13;product=hypothetical protein;protein_id=NP_627035.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3062563	3062577	.	+	.	ID=id3532;Dbxref=GeneID:1098239;Note=2x conserved repeat translated in 2SCC13.13;gbkey=repeat_region;gene=2SCC13.13
NC_003888.3	RefSeq	repeat_region	3062575	3062625	.	+	.	ID=id3533;Dbxref=GeneID:1098239;Note=3x degenerate repeat translated in 2SCC13.13;gbkey=repeat_region;gene=2SCC13.13
NC_003888.3	RefSeq	repeat_region	3062626	3062640	.	+	.	ID=id3534;Dbxref=GeneID:1098239;Note=2x conserved repeat translated in 2SCC13.13;gbkey=repeat_region;gene=2SCC13.13
NC_003888.3	RefSeq	sequence_feature	3063088	3063177	.	+	.	ID=id3535;Dbxref=GeneID:1098239;Note=region with high content in alanine amino acid residues;gbkey=misc_feature;gene=2SCC13.13
NC_003888.3	RefSeq	gene	3063968	3064564	.	-	.	ID=gene2817;Dbxref=GeneID:1098240;Name=2SCC13.14c;gbkey=Gene;gene=2SCC13.14c;gene_biotype=protein_coding;gene_synonym=2SCC13.14c;locus_tag=SCO2806
NC_003888.3	RefSeq	CDS	3063968	3064564	.	-	0	ID=cds2768;Parent=gene2817;Dbxref=Genbank:NP_627036.1,GeneID:1098240;Name=NP_627036.1;Note=2SCC13.14c%2C possible mutase%2C len: 198 aa%3B similar to TR:O05852 (EMBL:Z95120) Mycobacterium tuberculosis hypothetical 21.9 kDa protein MTCY07D11.12c%2C 203 aa%3B fasta scores: opt: 487 z-score: 602.4 E(): 4.7e-26%3B 42.3%25 identity in 194 aa overlap. Contains Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family;gbkey=CDS;gene=2SCC13.14c;product=mutase;protein_id=NP_627036.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3064082	3064549	.	-	.	ID=id3536;Dbxref=GeneID:1098240;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 79.10%2C E-value 9.1e-21;gbkey=misc_feature;gene=2SCC13.14c
NC_003888.3	RefSeq	ribosome_entry_site	3064766	3064770	.	+	.	ID=id3537;gbkey=RBS
NC_003888.3	RefSeq	gene	3064780	3065769	.	+	.	ID=gene2818;Dbxref=GeneID:1098241;Name=2SCC13.15;gbkey=Gene;gene=2SCC13.15;gene_biotype=protein_coding;gene_synonym=2SCC13.15;locus_tag=SCO2807
NC_003888.3	RefSeq	CDS	3064780	3065769	.	+	0	ID=cds2769;Parent=gene2818;Dbxref=Genbank:NP_627037.1,GeneID:1098241;Name=NP_627037.1;Note=2SCC13.15%2C possible integral membrane protein%2C len: 329 aa%3B similar to TR:CAB90881 (EMBL:AL355752) Streptomyces coelicolor  integral membrane protein SC10B7.28%2C 287 aa%3B fasta scores: opt: 598 z-score: 630.9 E(): 1.2e-27%3B 37.7%25 identity in 284 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCC13.15;product=hypothetical protein;protein_id=NP_627037.1;transl_table=11
NC_003888.3	RefSeq	gene	3065876	3066904	.	+	.	ID=gene2819;Dbxref=GeneID:1098242;Name=2SCC13.16;gbkey=Gene;gene=2SCC13.16;gene_biotype=protein_coding;gene_synonym=2SCC13.16;locus_tag=SCO2808
NC_003888.3	RefSeq	CDS	3065876	3066904	.	+	0	ID=cds2770;Parent=gene2819;Dbxref=Genbank:NP_627038.1,GeneID:1098242;Name=NP_627038.1;Note=2SCC13.16%2C possible hypothetical protein%2C len: 342 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCC13.16;product=hypothetical protein;protein_id=NP_627038.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3066924	3066928	.	+	.	ID=id3538;gbkey=RBS
NC_003888.3	RefSeq	gene	3066931	3068574	.	+	.	ID=gene2820;Dbxref=GeneID:1098243;Name=2SCC13.17;gbkey=Gene;gene=2SCC13.17;gene_biotype=protein_coding;gene_synonym=2SCC13.17;locus_tag=SCO2809
NC_003888.3	RefSeq	CDS	3066931	3068574	.	+	0	ID=cds2771;Parent=gene2820;Dbxref=Genbank:NP_627039.1,GeneID:1098243;Name=NP_627039.1;Note=2SCC13.17%2C membrane protein%2C len: 547 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCC13.17;product=hypothetical protein;protein_id=NP_627039.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3068558	3068563	.	+	.	ID=id3539;Dbxref=GeneID:1098243;gbkey=RBS;gene=2SCC13.17
NC_003888.3	RefSeq	gene	3068571	3069932	.	+	.	ID=gene2821;Dbxref=GeneID:1098244;Name=2SCC13.18;gbkey=Gene;gene=2SCC13.18;gene_biotype=protein_coding;gene_synonym=2SCC13.18,SCBAC17F8.01;locus_tag=SCO2810
NC_003888.3	RefSeq	CDS	3068571	3069932	.	+	0	ID=cds2772;Parent=gene2821;Dbxref=Genbank:NP_733584.1,GeneID:1098244;Name=NP_733584.1;Note=SCBAC17F8.01%2C unknown%2C len: 220aa: no significant database matches.~2SCC13.18%2C unknown (fragment)%2C len: >268 aa;gbkey=CDS;gene=2SCC13.18;product=hypothetical protein;protein_id=NP_733584.1;transl_table=11
NC_003888.3	RefSeq	gene	3070230	3070556	.	-	.	ID=gene2822;Dbxref=GeneID:1098245;Name=SCBAC17F8.02c;gbkey=Gene;gene=SCBAC17F8.02c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.02c;locus_tag=SCO2811
NC_003888.3	RefSeq	CDS	3070230	3070556	.	-	0	ID=cds2773;Parent=gene2822;Dbxref=Genbank:NP_627040.1,GeneID:1098245;Name=NP_627040.1;Note=SCBAC17F8.02c%2C possible regulator%2C len: 220 aa: similar to many from Gram positives eg. TR:Q52517 (EMBL:M18263) MmyJ from the methylenomycin cluster of plasmid SCP1 from Streptomyces coelicolor (111 aa) fasta scores%3B opt: 242%2C Z-score: 307.2%2C 43.878%25 identity in 98 aa overlap and TR:BAB49625 (EMBL:AP002999) probable regulatory protein from Rhizobium loti (118 aa) fasta scores%3B opt: 174%2C Z-score: 225.5%2C 38.095%25 identity in 84 aa overlap.;gbkey=CDS;gene=SCBAC17F8.02c;product=regulator;protein_id=NP_627040.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3070639	3070642	.	+	.	ID=id3540;gbkey=RBS
NC_003888.3	RefSeq	gene	3070648	3071898	.	+	.	ID=gene2823;Dbxref=GeneID:1098246;Name=SCBAC17F8.03;gbkey=Gene;gene=SCBAC17F8.03;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.03;locus_tag=SCO2812
NC_003888.3	RefSeq	CDS	3070648	3071898	.	+	0	ID=cds2774;Parent=gene2823;Dbxref=Genbank:NP_627041.1,GeneID:1098246;Name=NP_627041.1;Note=SCBAC17F8.03%2C possible drug efflux protein%2C len: 416aa: similar to many eg. TR:Q9LA76 (EMBL:AF148322) valanimycin-resistance protein from Streptomyces viridifaciens (402 aa) fasta scores%3B opt: 582%2C Z-score: 614.9%2C 32.405%25 identity (33.952%25 ungapped) in 395 aa overlap and TR:CAC41338 (EMBL:AJ307714) tertracycline resistance protein from Escherichia coli (398 aa) fasta scores%3B opt: 262%2C Z-score: 281.3%2C 28.056%25 identity (32.268%25 ungapped) in 360 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCBAC17F8.03;product=drug efflux protein;protein_id=NP_627041.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3070684	3071865	.	+	.	ID=id3541;Dbxref=GeneID:1098246;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -81.50%2C E-value 0.0007;gbkey=misc_feature;gene=SCBAC17F8.03
NC_003888.3	RefSeq	sequence_feature	3070849	3070899	.	+	.	ID=id3542;Dbxref=GeneID:1098246;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCBAC17F8.03
NC_003888.3	RefSeq	ribosome_entry_site	3071948	3071953	.	+	.	ID=id3543;gbkey=RBS
NC_003888.3	RefSeq	gene	3071960	3072526	.	+	.	ID=gene2824;Dbxref=GeneID:1098247;Name=SCBAC17F8.04;gbkey=Gene;gene=SCBAC17F8.04;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.04;locus_tag=SCO2813
NC_003888.3	RefSeq	CDS	3071960	3072526	.	+	0	ID=cds2775;Parent=gene2824;Dbxref=Genbank:NP_627042.1,GeneID:1098247;Name=NP_627042.1;Note=SCBAC17F8.04%2C conserved hypothetical protein%2C len: 188aa: similar to many e.g. TR:BAB48410 (EMBL:AP002996) MLR0926 protein from Rhizobium loti (188 aa) fasta scores%3B opt: 447%2C Z-score: 537.5%2C 38.587%25 identity (39.227%25 ungapped) in 184 aa overlap;gbkey=CDS;gene=SCBAC17F8.04;product=hypothetical protein;protein_id=NP_627042.1;transl_table=11
NC_003888.3	RefSeq	gene	3072689	3073546	.	-	.	ID=gene2825;Dbxref=GeneID:1098248;Name=SCBAC17F8.05c;gbkey=Gene;gene=SCBAC17F8.05c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.05c;locus_tag=SCO2814
NC_003888.3	RefSeq	CDS	3072689	3073546	.	-	0	ID=cds2776;Parent=gene2825;Dbxref=Genbank:NP_627043.1,GeneID:1098248;Name=NP_627043.1;Note=SCBAC17F8.05c%2C possible methyltransferase%2C len: 285 aa: similar to many some of which reside within antibiotic biosynthetic clusters e.g. TR:Q54818 (EMBL:L35560) doxorubicin polyketide biosynthesis gene from Streptomyces peucetius (286 aa) fasta scores%3B opt: 258%2C Z-score: 287.1%2C 38.136%25 identity (39.130%25 ungapped) in 118 aa overlap%2C TR:Q9S0N6 (EMBL:AB032524) C5-O-methyltransferase AveD from the avermectin biosynthetic cluster of Streptomyces avermitilis (283 aa) fasta scores%3B opt: 249%2C Z-score: 277.5%2C 30.508%25 identity (34.123%25 ungapped) in 236 aa overlap and TR:AAK64748 (EMBL:AE007203) hypothetical protein from Rhizobium meliloti (261 aa) fasta scores%3B opt: 581%2C Z-score: 635.1%2C 41.406%25 identity (42.570%25 ungapped) in 256 aa overlap.;gbkey=CDS;gene=SCBAC17F8.05c;product=methyltransferase;protein_id=NP_627043.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3072887	3073501	.	-	.	ID=id3544;Dbxref=GeneID:1098248;Note=Pfam match to entry PF01209 Ubie_methyltran%2C ubiE/COQ5 methyltransferase family%2C score -100.60%2C E-value 0.00013;gbkey=misc_feature;gene=SCBAC17F8.05c
NC_003888.3	RefSeq	ribosome_entry_site	3073552	3073556	.	-	.	ID=id3545;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3073569	3073572	.	+	.	ID=id3546;gbkey=RBS
NC_003888.3	RefSeq	gene	3073580	3074278	.	+	.	ID=gene2826;Dbxref=GeneID:1098249;Name=SCBAC17F8.06;gbkey=Gene;gene=SCBAC17F8.06;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.06;locus_tag=SCO2815
NC_003888.3	RefSeq	CDS	3073580	3074278	.	+	0	ID=cds2777;Parent=gene2826;Dbxref=Genbank:NP_627044.1,GeneID:1098249;Name=NP_627044.1;Note=SCBAC17F8.06%2C possible TetR-family transcriptional regulator%2C len: 232 aa: similar to many hypothetical regulators eg. TR:Q9RWD4 (EMBL:AE001929) TetR-family transcriptional regulator from Deinococcus radiodurans (229 aa) fasta scores%3B opt: 164%2C Z-score: 191.6%2C 34.416%25 identity (36.054%25 ungapped) in 154 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=CDS;gene=SCBAC17F8.06;product=TetR family transcriptional regulator;protein_id=NP_627044.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3073727	3073867	.	+	.	ID=id3547;Dbxref=GeneID:1098249;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 22.10%2C E-value 0.00057;gbkey=misc_feature;gene=SCBAC17F8.06
NC_003888.3	RefSeq	ribosome_entry_site	3074361	3074367	.	+	.	ID=id3548;gbkey=RBS
NC_003888.3	RefSeq	gene	3074377	3075477	.	+	.	ID=gene2827;Dbxref=GeneID:1098250;Name=SCBAC17F8.07;gbkey=Gene;gene=SCBAC17F8.07;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.07;locus_tag=SCO2816
NC_003888.3	RefSeq	CDS	3074377	3075477	.	+	0	ID=cds2778;Parent=gene2827;Dbxref=Genbank:NP_627045.1,GeneID:1098250;Name=NP_627045.1;Note=SCBAC17F8.07%2C conserved hypothetical protein%2C len: 366 aa%3B similar to many e.g. TR:Q9I0Z9 (EMBL:AE004676) hypothetical protein from Pseudomonas aeruginosa (333 aa) fasta scores%3B opt: 588%2C Z-score: 637.0%2C 47.826%25 identity (50.305%25 ungapped)in 345 aa overlap;gbkey=CDS;gene=SCBAC17F8.07;product=hypothetical protein;protein_id=NP_627045.1;transl_table=11
NC_003888.3	RefSeq	gene	3075453	3077357	.	-	.	ID=gene2828;Dbxref=GeneID:1098251;Name=SCBAC17F8.08c;gbkey=Gene;gene=SCBAC17F8.08c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.08c;locus_tag=SCO2817
NC_003888.3	RefSeq	CDS	3075453	3077357	.	-	0	ID=cds2779;Parent=gene2828;Dbxref=Genbank:NP_627046.1,GeneID:1098251;Name=NP_627046.1;Note=SCBAC17F8.08c%2C conserved hypothetical protein%2C len: 634 aa: similar in regions to many proteins of varying lengths e.g. TR:Q9RCY2 (EMBL:AL133469) hypothetical protein SCM10.16c from Streptomyces coelicolor (714 aa) fasta scores%3B opt: 1259%2C Z-score: 1358.4%2C 43.960%25 identity (46.454%25 ungapped) in 596 aa overlap and TR:Q9HVI8 (EMBL:AE004874) hypothetical protein from Pseudomonas aeruginosa (1415 aa) fasta scores%3B opt: 961%2C Z-score: 1032.5%2C 36.825%25 identity (40.250%25 ungapped) in 611 aa overlap. Contains Pfam match to entry PF00563 EAL%2C Domain of unknown function and Pfam match to entry PF00990 GGDEF%2C GGDEF domain;gbkey=CDS;gene=SCBAC17F8.08c;product=hypothetical protein;protein_id=NP_627046.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3075525	3076313	.	-	.	ID=id3549;Dbxref=GeneID:1098251;Note=Pfam match to entry PF00563 EAL%2C Domain of unknown function 2%2C score 292.50%2C E-value 5.4e-84;gbkey=misc_feature;gene=SCBAC17F8.08c
NC_003888.3	RefSeq	sequence_feature	3076353	3076877	.	-	.	ID=id3550;Dbxref=GeneID:1098251;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain%2C score 176.80%2C E-value 3.6e-49;gbkey=misc_feature;gene=SCBAC17F8.08c
NC_003888.3	RefSeq	ribosome_entry_site	3077364	3077367	.	-	.	ID=id3551;gbkey=RBS
NC_003888.3	RefSeq	gene	3077642	3078952	.	+	.	ID=gene2829;Dbxref=GeneID:1098252;Name=SCBAC17F8.09;gbkey=Gene;gene=SCBAC17F8.09;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.09;locus_tag=SCO2818
NC_003888.3	RefSeq	CDS	3077642	3078952	.	+	0	ID=cds2780;Parent=gene2829;Dbxref=Genbank:NP_627047.1,GeneID:1098252;Name=NP_627047.1;Note=SCBAC17F8.09%2C hypothetical protein%2C len: 436 aa: similar TR:Q9Z4X3 (EMBL:AL035654) hypothetical protein SCE8.01 from Streptomyces coelicolor (432 aa) fasta scores%3B opt: 555%2C Z-score: 609.9%2C 33.991%25 identity (38.945%25 ungapped) in 456 aa overlap;gbkey=CDS;gene=SCBAC17F8.09;product=hypothetical protein;protein_id=NP_627047.1;transl_table=11
NC_003888.3	RefSeq	gene	3079125	3079198	.	-	.	ID=gene2830;Dbxref=GeneID:3240020;Name=SCOt20;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt20
NC_003888.3	RefSeq	tRNA	3079125	3079198	.	-	.	ID=rna26;Parent=gene2830;Dbxref=GeneID:3240020;Note=tRNA Lys Anticodon CTT. Score 87.71;gbkey=tRNA;product=tRNA-Lys
NC_003888.3	RefSeq	exon	3079125	3079198	.	-	.	ID=id3552;Parent=rna26;Dbxref=GeneID:3240020;Note=tRNA Lys Anticodon CTT. Score 87.71;gbkey=tRNA;product=tRNA-Lys
NC_003888.3	RefSeq	gene	3079189	3079803	.	-	.	ID=gene2831;Dbxref=GeneID:1098253;Name=SCBAC17F8.10c;gbkey=Gene;gene=SCBAC17F8.10c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.10c;locus_tag=SCO2819
NC_003888.3	RefSeq	CDS	3079189	3079803	.	-	0	ID=cds2781;Parent=gene2831;Dbxref=Genbank:NP_627048.1,GeneID:1098253;Name=NP_627048.1;Note=SCBAC17F8.10c%2C hypothetical protein%2C len: 204 aa: similar to many eg. TR:Q9X8N0 (EMBL:AL049628) hypothetical protein SCE94.25 from Streptomyces coelicolor (233 aa) fasta scores%3B opt: 250%2C Z-score: 267.4%2C 36.709%25 identity (39.726%25 ungapped) in 158 aa overlap.;gbkey=CDS;gene=SCBAC17F8.10c;product=hypothetical protein;protein_id=NP_627048.1;transl_table=11
NC_003888.3	RefSeq	gene	3079945	3080292	.	-	.	ID=gene2832;Dbxref=GeneID:1098254;Name=SCBAC17F8.11c;gbkey=Gene;gene=SCBAC17F8.11c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.11c;locus_tag=SCO2820
NC_003888.3	RefSeq	CDS	3079945	3080292	.	-	0	ID=cds2782;Parent=gene2832;Dbxref=Genbank:NP_627049.1,GeneID:1098254;Name=NP_627049.1;Note=SCBAC17F8.11c%2C hypothetical protein%2C len: 115 aa: no significant database matches.;gbkey=CDS;gene=SCBAC17F8.11c;product=hypothetical protein;protein_id=NP_627049.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3080300	3080305	.	-	.	ID=id3553;gbkey=RBS
NC_003888.3	RefSeq	gene	3080444	3082009	.	-	.	ID=gene2833;Dbxref=GeneID:1098255;Name=SCBAC17F8.12c;gbkey=Gene;gene=SCBAC17F8.12c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.12c;locus_tag=SCO2821
NC_003888.3	RefSeq	CDS	3080444	3082009	.	-	0	ID=cds2783;Parent=gene2833;Dbxref=Genbank:NP_627050.1,GeneID:1098255;Name=NP_627050.1;Note=SCBAC17F8.12c%2C possible  pectate lyase%2C len: 521 aa: similar to many e.g. TR:Q9KGY6 (EMBL:AF278705) pectate lyase B from Alteromonas haloplanktis (658 aa) fasta scores%3B opt: 1744%2C Z-score: 1590.1%2C 63.301%25 identity (65.859%25 ungapped) in 515 aa overlap and SW:P04959 (PELB_ERWCH) pectate lyase B from Erwinia chrysanthemi (375 aa) fasta scores%3B opt: 413%2C Z-score: 386.2%2C 29.167%25 identity (32.464%25 ungapped) in 384 aa overlap. Contains Pfam match to entry PF00544 pec_lyase%2C Pectate lyase and a probable N-terminal signal sequence.;gbkey=CDS;gene=SCBAC17F8.12c;product=pectate lyase;protein_id=NP_627050.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3080933	3081973	.	-	.	ID=id3554;Dbxref=GeneID:1098255;Note=Pfam match to entry PF00544 pec_lyase%2C Pectate lyase%2C score 48.10%2C E-value 4.4e-12;gbkey=misc_feature;gene=SCBAC17F8.12c
NC_003888.3	RefSeq	ribosome_entry_site	3082017	3082020	.	-	.	ID=id3555;gbkey=RBS
NC_003888.3	RefSeq	gene	3082430	3083161	.	-	.	ID=gene2834;Dbxref=GeneID:1098256;Name=SCBAC17F8.13c;gbkey=Gene;gene=SCBAC17F8.13c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.13c;locus_tag=SCO2822
NC_003888.3	RefSeq	CDS	3082430	3083161	.	-	0	ID=cds2784;Parent=gene2834;Dbxref=Genbank:NP_627051.1,GeneID:1098256;Name=NP_627051.1;Note=SCBAC17F8.13c%2C possible decarboxylase%2C len: 243 aa: similar to many e.g. SW:Q05115 (AMDA_BORBR) arylmalonate decarboxylase from Alcaligenes bronchisepticus (240 aa) fasta scores%3B opt: 258%2C Z-score: 293.3%2C 33.333%25 identity (34.302%25 ungapped) in 177 aa overlap. Almost identical to TR:Q54412 (EMBL:X52071) hypothetical protein which close alongside transfer RNA-gly in Streptomyces lividans (195 aa) fasta scores%3B opt: 1233%2C Z-score: 1358.6%2C 98.980%25 identity (99.487%25 ungapped) in 196 aa overlap. Also similar to neighbouring CDS SCBAC17F8.14c.;gbkey=CDS;gene=SCBAC17F8.13c;product=decarboxylase;protein_id=NP_627051.1;transl_table=11
NC_003888.3	RefSeq	gene	3083158	3084060	.	-	.	ID=gene2835;Dbxref=GeneID:1098257;Name=SCBAC17F8.14c;gbkey=Gene;gene=SCBAC17F8.14c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.14c;locus_tag=SCO2823
NC_003888.3	RefSeq	CDS	3083158	3084060	.	-	0	ID=cds2785;Parent=gene2835;Dbxref=Genbank:NP_627052.1,GeneID:1098257;Name=NP_627052.1;Note=SCBAC17F8.14c%2C possible decarboxylase%2C len: 300 aa: similar to many e.g. SW:Q05115 (AMDA_BORBR) arylmalonate decarboxylase from Alcaligenes bronchisepticus (240 aa) fasta scores%3B opt: 328%2C Z-score: 331.2%2C 33.810%25 identity (35.323%25 ungapped) in 210 aa overlap and TR:Q54412 (EMBL:X52071) hypothetical protein which close alongside transfer RNA-gly in Streptomyces lividans (195 aa) fasta scores%3B opt: 295%2C Z-score: 300.7%2C 36.872%25 identity (38.824%25 ungapped) in 179 aa overlap. Also similar to neighbouring CDS SCBAC17F8.13c.;gbkey=CDS;gene=SCBAC17F8.14c;product=decarboxylase;protein_id=NP_627052.1;transl_table=11
NC_003888.3	RefSeq	gene	3084248	3085231	.	+	.	ID=gene2836;Dbxref=GeneID:1098258;Name=SCBAC17F8.15;gbkey=Gene;gene=SCBAC17F8.15;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.15;locus_tag=SCO2824
NC_003888.3	RefSeq	CDS	3084248	3085231	.	+	0	ID=cds2786;Parent=gene2836;Dbxref=Genbank:NP_627053.1,GeneID:1098258;Name=NP_627053.1;Note=SCBAC17F8.15%2C possible NAD-binding protein%2C len: 327aa: similar to many predicted dehydrogenases eg. TR:Q9KEA4 (EMBL:AP001510) D-3-phosphoglycerate dehydrogenase from Bacillus halodurans (316 aa) fasta scores%3B opt: 523%2C Z-score: 556.0%2C 33.808%25 identity (35.055%25 ungapped) in 281 aa overlap. Contains Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain but does not contain the corresponding catalytic domain.;gbkey=CDS;gene=SCBAC17F8.15;product=NAD-binding protein;protein_id=NP_627053.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3084584	3085099	.	+	.	ID=id3556;Dbxref=GeneID:1098258;Note=Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%2C score 104.70%2C E-value 1.7e-27;gbkey=misc_feature;gene=SCBAC17F8.15
NC_003888.3	RefSeq	ribosome_entry_site	3085256	3085260	.	+	.	ID=id3557;gbkey=RBS
NC_003888.3	RefSeq	gene	3085268	3086671	.	+	.	ID=gene2837;Dbxref=GeneID:1098259;Name=SCBAC17F8.16;gbkey=Gene;gene=SCBAC17F8.16;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.16;locus_tag=SCO2825
NC_003888.3	RefSeq	CDS	3085268	3086671	.	+	0	ID=cds2787;Parent=gene2837;Dbxref=Genbank:NP_627054.1,GeneID:1098259;Name=NP_627054.1;Note=SCBAC17F8.16%2C possible amidase%2C len: 467 aa: similar to many e.g. TR:Q9ZHK8 (EMBL:AF058285) pyrazinamidase from Mycobacterium smegmatis (468 aa) fasta scores%3B opt: 767%2C Z-score: 783.4%2C 34.573%25 identity (35.666%25 ungapped) in 457 aa overlap and SW:Q9Z580 (GATA_STRCO) glutamyl-tRNA amidotransferase subunit A SC8D9.11 from Streptomyces coelicolor (497 aa) fasta scores%3B opt: 628%2C Z-score: 642.1%2C 33.128%25 identity (35.698%25 ungapped) in 486 aa overlap. Contains Pfam match to entry PF01425 Amidase%2C Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00571 Amidases signature;gbkey=CDS;gene=SCBAC17F8.16;product=amidase;protein_id=NP_627054.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3085340	3086608	.	+	.	ID=id3558;Dbxref=GeneID:1098259;Note=Pfam match to entry PF01425 Amidase%2C Amidase%2C score 415.60%2C E-value 4.6e-121;gbkey=misc_feature;gene=SCBAC17F8.16
NC_003888.3	RefSeq	sequence_feature	3085616	3085639	.	+	.	ID=id3559;Dbxref=GeneID:1098259;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC17F8.16
NC_003888.3	RefSeq	sequence_feature	3085727	3085822	.	+	.	ID=id3560;Dbxref=GeneID:1098259;Note=PS00571 Amidases signature;gbkey=misc_feature;gene=SCBAC17F8.16
NC_003888.3	RefSeq	gene	3086692	3087165	.	+	.	ID=gene2838;Dbxref=GeneID:1098260;Name=SCBAC17F8.17;gbkey=Gene;gene=SCBAC17F8.17;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.17;locus_tag=SCO2826
NC_003888.3	RefSeq	CDS	3086692	3087165	.	+	0	ID=cds2788;Parent=gene2838;Dbxref=Genbank:NP_627055.1,GeneID:1098260;Name=NP_627055.1;Note=SCBAC17F8.17%2C hypothetical protein%2C len: 157 aa: no significant database matches.;gbkey=CDS;gene=SCBAC17F8.17;product=hypothetical protein;protein_id=NP_627055.1;transl_table=11
NC_003888.3	RefSeq	gene	3087146	3087649	.	-	.	ID=gene2839;Dbxref=GeneID:1098261;Name=SCBAC17F8.18c;gbkey=Gene;gene=SCBAC17F8.18c;gene_biotype=protein_coding;gene_synonym=SCBAC17F8.18c;locus_tag=SCO2827
NC_003888.3	RefSeq	CDS	3087146	3087649	.	-	0	ID=cds2789;Parent=gene2839;Dbxref=Genbank:NP_627056.1,GeneID:1098261;Name=NP_627056.1;Note=SCBAC17F8.18c%2C hypothetical protein%2C len: 167 aa: no significant database matches.;gbkey=CDS;gene=SCBAC17F8.18c;product=hypothetical protein;protein_id=NP_627056.1;transl_table=11
NC_003888.3	RefSeq	gene	3087748	3088677	.	+	.	ID=gene2840;Dbxref=GeneID:1098262;Name=SCE20.02;gbkey=Gene;gene=SCE20.02;gene_biotype=protein_coding;gene_synonym=SCE20.02;locus_tag=SCO2828
NC_003888.3	RefSeq	CDS	3087748	3088677	.	+	0	ID=cds2790;Parent=gene2840;Dbxref=Genbank:NP_627057.1,GeneID:1098262;Name=NP_627057.1;Note=SCE20.02%2C probable amino acid ABC transporter%2C solute-binding component%2C len: 309 aa. Similar to several including: Salmonella typhimurium SW:ARGT_SALTY(EMBL:V01368) lysine-arginine-ornithine-binding periplasmic protein precursor (260 aa)%2C fasta scores opt: 251 z-score: 294.5 E(): 5.1e-09 25.8%25 identity in 279 aa overlap and Rhizobium sp. (strain NGR234) SW:Y4TE_RHISN(EMBL:AE000098) probable amino-acid ABC transporter periplasmic binding protein Y4TE (300 aa)%2C fasta scores opt: 599 z-score: 691.7 E(): 3.8e-31 35.4%25 identity in 297 aa overlap. Contains a Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3. Also contains an N-terminal possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCE20.02;product=amino acid ABC transporter substrate-binding protein;protein_id=NP_627057.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3087814	3088623	.	+	.	ID=id3561;Dbxref=GeneID:1098262;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 77.30%2C E-value 3.2e-19;gbkey=misc_feature;gene=SCE20.02
NC_003888.3	RefSeq	gene	3088674	3089375	.	+	.	ID=gene2841;Dbxref=GeneID:1098263;Name=SCE20.03;gbkey=Gene;gene=SCE20.03;gene_biotype=protein_coding;gene_synonym=SCE20.03;locus_tag=SCO2829
NC_003888.3	RefSeq	CDS	3088674	3089375	.	+	0	ID=cds2791;Parent=gene2841;Dbxref=Genbank:NP_627058.1,GeneID:1098263;Name=NP_627058.1;Note=SCE20.03%2C amino acid ABC transporter%2C integral membrane component%2C len: 233 aa. Highly similar to many including: Escherichia coli SW:GLNP_ECOLI(EMBL:X14180) glutamine transport system permease GlnP (219 aa)%2C fasta scores opt: 377 z-score: 445.7 E(): 1.9e-17 27.8%25 identity in 212 aa overlap and Rhizobium sp. (strain NGR234) SW:Y4TF_RHISN(EMBL:AE000098) probable amino-acid ABC transporter permease Y4TF (238 aa)%2C fasta scores opt: 570 z-score: 667.5 E(): 8.5e-30 45.1%25 identity in 204 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Also contains a possible N-terminal signal sequence and possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCE20.03;product=amino acid ABC transporter transmembrane protein;protein_id=NP_627058.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3088986	3089216	.	+	.	ID=id3562;Dbxref=GeneID:1098263;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 44.30%2C E-value 2.7e-09;gbkey=misc_feature;gene=SCE20.03
NC_003888.3	RefSeq	gene	3089372	3090022	.	+	.	ID=gene2842;Dbxref=GeneID:1098264;Name=SCE20.04;gbkey=Gene;gene=SCE20.04;gene_biotype=protein_coding;gene_synonym=SCE20.04;locus_tag=SCO2830
NC_003888.3	RefSeq	CDS	3089372	3090022	.	+	0	ID=cds2792;Parent=gene2842;Dbxref=Genbank:NP_627059.1,GeneID:1098264;Name=NP_627059.1;Note=SCE20.04%2C probable amino acid ABC transporter%2C integral membrane component%2C len: 216 aa. Highly similar to several ABC transporter permeases including: Escherichia coli SW:GLNP_ECOLI(EMBL:X14180) glutamine transport system permease GlnP (219 aa)%2C fasta scores opt: 378 z-score: 454.8 E(): 6e-18 33.2%25 identity in 217 aa overlap and Rhizobium sp. (strain NGR234) SW:Y4TG_RHISN(EMBL:AE000098) probable amino-acid ABC transporter permease Y4TG (231 aa)%2C fasta scores opt: 667 z-score: 792.8 E(): 0 47.6%25 identity in 208 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=CDS;gene=SCE20.04;product=amino acid ABC transporter transmembrane protein;protein_id=NP_627059.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3089699	3089920	.	+	.	ID=id3563;Dbxref=GeneID:1098264;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 37.50%2C E-value 3.1e-07;gbkey=misc_feature;gene=SCE20.04
NC_003888.3	RefSeq	gene	3090012	3090797	.	+	.	ID=gene2843;Dbxref=GeneID:1098265;Name=SCE20.05;gbkey=Gene;gene=SCE20.05;gene_biotype=protein_coding;gene_synonym=SCE20.05;locus_tag=SCO2831
NC_003888.3	RefSeq	CDS	3090012	3090797	.	+	0	ID=cds2793;Parent=gene2843;Dbxref=Genbank:NP_627060.1,GeneID:1098265;Name=NP_627060.1;Note=SCE20.05%2C probable amino acid ABC transporter%2C ATP-binding component%2C len: 261 aa. Highly similar to many ATP-binding transport protein including: Bacillus stearothermophilus SW:GLNQ_BACST(EMBL:M61017) glutamine transport ATP-binding protein GLNQ (242 aa)%2C fasta scores opt: 758 z-score: 851.7 E():0 47.5%25 identity in 242 aa overlap and Thermotoga maritima TR:Q9WZ60(EMBL:AE001734) amino acid ABC transporter%2C ATP-binding protein (242 aa)%2C fasta scores opt: 829 z-score: 930.4 E(): 0 54.5%25 identity in 242 aa overlap. Also similar to several other Streptomyces coelicolor transport proteins e.g. TR:O50495(EMBL:AL020958) glutamate uptake system ATP-binding protein%2C GluA (258 aa)%2C fasta scores opt: 775 z-score: 683.3 E(): 1.1e-32 48.2%25 identity in 251 aa overlap. Contains Prosite hits to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a Pfam match to entry PF00005 ABC_tran%2C ABC transporter.;gbkey=CDS;gene=SCE20.05;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_627060.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3090168	3090191	.	+	.	ID=id3564;Dbxref=GeneID:1098265;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE20.05
NC_003888.3	RefSeq	sequence_feature	3090210	3090710	.	+	.	ID=id3565;Dbxref=GeneID:1098265;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 149.60%2C E-value 5.4e-41;gbkey=misc_feature;gene=SCE20.05
NC_003888.3	RefSeq	sequence_feature	3090480	3090524	.	+	.	ID=id3566;Dbxref=GeneID:1098265;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE20.05
NC_003888.3	RefSeq	gene	3090880	3091737	.	+	.	ID=gene2844;Dbxref=GeneID:1098266;Name=SCE20.06;gbkey=Gene;gene=SCE20.06;gene_biotype=protein_coding;gene_synonym=SCE20.06;locus_tag=SCO2832
NC_003888.3	RefSeq	CDS	3090880	3091737	.	+	0	ID=cds2794;Parent=gene2844;Dbxref=Genbank:NP_627061.1,GeneID:1098266;Name=NP_627061.1;Note=SCE20.06%2C possible IclR-family transcriptional regulator%2C len: 285 aa%2C Almost identical to a gene fragment which%2C like SCE20.06%2C is located upstream of the Streptomyces lividans lysT tRNA gene: TR:Q54411(EMBL:X52073) (200 aa)%2C fasta scores opt: 1250 z-score: 1464.9 E():0 99.5%25 identity in 200 aa overlap. Also similar to Streptomyces coelicolor TR:Q9X9U3(EMBL:AL096823) transcriptional regulator (241 aa)%2C fasta scores opt: 597 z-score: 704.2 E(): 7.7e-32 43.2%25 identity in 236 aa overlap. Contains a Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator with a helix-turn-helix motif situated between residues 41..62 (+3.07 SD).;gbkey=CDS;gene=SCE20.06;product=IclR family transcriptional regulator;protein_id=NP_627061.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3091180	3091704	.	+	.	ID=id3567;Dbxref=GeneID:1098266;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 21.90%2C E-value 6e-08;gbkey=misc_feature;gene=SCE20.06
NC_003888.3	RefSeq	gene	3091827	3091900	.	+	.	ID=gene2845;Dbxref=GeneID:3240021;Name=SCOt21;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt21
NC_003888.3	RefSeq	tRNA	3091827	3091900	.	+	.	ID=rna27;Parent=gene2845;Dbxref=GeneID:3240021;Note=tRNA Lys anticodon CTT;gbkey=tRNA;product=tRNA-Lys
NC_003888.3	RefSeq	exon	3091827	3091900	.	+	.	ID=id3568;Parent=rna27;Dbxref=GeneID:3240021;Note=tRNA Lys anticodon CTT;gbkey=tRNA;product=tRNA-Lys
NC_003888.3	RefSeq	gene	3091946	3092551	.	-	.	ID=gene2846;Dbxref=GeneID:1098267;Name=chb;gbkey=Gene;gene=chb;gene_biotype=protein_coding;gene_synonym=chb;locus_tag=SCO2833
NC_003888.3	RefSeq	CDS	3091946	3092551	.	-	0	ID=cds2795;Parent=gene2846;Dbxref=Genbank:NP_627062.1,GeneID:1098267;Name=NP_627062.1;Note=SCE20.07c%2C chb%2C  chitin binding protein%2C len: 201 aa. Highly similar to several including: Streptomyces olivaceoviridis (Streptomyces corchorusii) TR:Q54501(EMBL:X78535) chitin binding protein precursor Chb1 (201 aa)%2C fasta scores opt: 1185 z-score: 1303.0 E():0 83.7%25 identity in 202 aa overlap and Streptomyces reticuli TR:O87962(EMBL:Y14315) chitin binding protein (Chb2) (201 aa)%2C fasta scores opt: 1161 z-score: 1276.8 E(): 0 79.1%25 identity in 201 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=chb;product=chitin binding protein;protein_id=NP_627062.1;transl_table=11
NC_003888.3	RefSeq	gene	3092672	3093823	.	-	.	ID=gene2847;Dbxref=GeneID:1098268;Name=SCE20.08c;gbkey=Gene;gene=SCE20.08c;gene_biotype=protein_coding;gene_synonym=SCE20.08c;locus_tag=SCO2834
NC_003888.3	RefSeq	CDS	3092672	3093823	.	-	0	ID=cds2796;Parent=gene2847;Dbxref=Genbank:NP_627063.1,GeneID:1098268;Name=NP_627063.1;Note=SCE20.08c%2C possible membrane protein%2C len: 383 aa%3B C-terminal region similar to TR:Q9KIM1 (EMBL:AF230489) Streptomyces coelicolor F42A (integral membrane protein) or SCK7.11c%2C 312 aa%3B fasta scores: opt: 467 Z-score: 441.6 E(): 5.8e-17%3B 31.229%25 identity in 301 aa overlap. Contains possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCE20.08c;product=hypothetical protein;protein_id=NP_627063.1;transl_table=11
NC_003888.3	RefSeq	gene	3093880	3094941	.	-	.	ID=gene2848;Dbxref=GeneID:1098269;Name=SCE20.09c;gbkey=Gene;gene=SCE20.09c;gene_biotype=protein_coding;gene_synonym=SCE20.09c;locus_tag=SCO2835
NC_003888.3	RefSeq	CDS	3093880	3094941	.	-	0	ID=cds2797;Parent=gene2848;Dbxref=Genbank:NP_627064.1,GeneID:1098269;Name=NP_627064.1;Note=SCE20.09c%2C possible membrane protein%2C len: 353 aa. Contains a possible membrane spanning hydrophobic domain and is rich in the amino acid Ala.;gbkey=CDS;gene=SCE20.09c;product=hypothetical protein;protein_id=NP_627064.1;transl_table=11
NC_003888.3	RefSeq	gene	3095139	3095215	.	+	.	ID=gene2849;Dbxref=GeneID:3240022;Name=SCOt22;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt22
NC_003888.3	RefSeq	tRNA	3095139	3095215	.	+	.	ID=rna28;Parent=gene2849;Dbxref=GeneID:3240022;Note=tRNA Lys anticodon CTT;gbkey=tRNA;product=tRNA-Lys
NC_003888.3	RefSeq	exon	3095139	3095215	.	+	.	ID=id3569;Parent=rna28;Dbxref=GeneID:3240022;Note=tRNA Lys anticodon CTT;gbkey=tRNA;product=tRNA-Lys
NC_003888.3	RefSeq	gene	3095506	3097467	.	+	.	ID=gene2850;Dbxref=GeneID:1098270;Name=SCE20.10;gbkey=Gene;gene=SCE20.10;gene_biotype=protein_coding;gene_synonym=SCE20.10;locus_tag=SCO2836
NC_003888.3	RefSeq	CDS	3095506	3097467	.	+	0	ID=cds2798;Parent=gene2850;Dbxref=Genbank:NP_627065.1,GeneID:1098270;Name=NP_627065.1;Note=SCE20.10%2C possible glycosyl transferase.%2C len: 653 aa. Weakly similar to several other glycosyl transferases e.g. Aquifex aeolicus TR:O67406 (EMBL:AE000738) cellulose synthase catalytic subunit (759 aa)%2C fasta scores opt: 326 z-score: 359.1 E(): 1.3e-12 22.0%25 identity in 590 aa overlap. Contains a Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases and multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCE20.10;product=glycosyl transferase;protein_id=NP_627065.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3096001	3096531	.	+	.	ID=id3570;Dbxref=GeneID:1098270;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 14.20%2C E-value 0.01;gbkey=misc_feature;gene=SCE20.10
NC_003888.3	RefSeq	gene	3097464	3099401	.	+	.	ID=gene2851;Dbxref=GeneID:1098271;Name=SCE20.11;gbkey=Gene;gene=SCE20.11;gene_biotype=protein_coding;gene_synonym=SCE20.11;locus_tag=SCO2837
NC_003888.3	RefSeq	CDS	3097464	3099401	.	+	0	ID=cds2799;Parent=gene2851;Dbxref=Genbank:NP_627066.1,GeneID:1098271;Name=NP_627066.1;Note=SCE20.11%2C possible hypothetical protein%2C len: 645 aa. Weakly similar to a Eukaryotic galactose oxidase precursor (EC 1.1.3.9) from Dactylium dendroides (Cladobotryum dendroides) SW:GAOA_DACDE(EMBL:M86819) (680 aa)%2C fasta scores opt: 350 z-score: 374.4 E(): 1.8e-13 26.8%25 identity in 400 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE20.11;product=hypothetical protein;protein_id=NP_627066.1;transl_table=11
NC_003888.3	RefSeq	gene	3099502	3100500	.	-	.	ID=gene2852;Dbxref=GeneID:1098272;Name=SCE20.12c;gbkey=Gene;gene=SCE20.12c;gene_biotype=protein_coding;gene_synonym=SCE20.12c;locus_tag=SCO2838
NC_003888.3	RefSeq	CDS	3099502	3100500	.	-	0	ID=cds2800;Parent=gene2852;Dbxref=Genbank:NP_627067.1,GeneID:1098272;Name=NP_627067.1;Note=SCE20.12c%2C possible  endoglucanase%2C len: 332 aa. Similar to many including: Streptomyces halstedii SW:GUN1_STRHA(EMBL:Z12157) endoglucanase 1 precursor (EC 3.2.1.4) (321 aa)%2C fasta scores opt: 613 z-score: 677.4 E(): 2.4e-30 37.6%25 identity in 343 aa overlap and Mycobacterium tuberculosis TR:O53607(EMBL:AL021428) cellulase (380 aa)%2C fasta scores opt: 796 z-score: 876.5 E():0 44.3%25 identity in 298 aa overlap. Note that codon 10 maybe the true initiation codon. Contains a Pfam match to entry PF01341 Glyco_hydro_6%2C Glycosyl hydrolases and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE20.12c;product=endoglucanase;protein_id=NP_627067.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3099529	3100356	.	-	.	ID=id3571;Dbxref=GeneID:1098272;Note=Pfam match to entry PF01341 Glyco_hydro_6%2C Glycosyl hydrolases family 6%2C score 273.60%2C E-value 2.5e-78;gbkey=misc_feature;gene=SCE20.12c
NC_003888.3	RefSeq	sequence_feature	3100435	3100467	.	-	.	ID=id3572;Dbxref=GeneID:1098272;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE20.12c
NC_003888.3	RefSeq	gene	3100609	3101196	.	-	.	ID=gene2853;Dbxref=GeneID:1098273;Name=SCE20.13c;gbkey=Gene;gene=SCE20.13c;gene_biotype=protein_coding;gene_synonym=SCE20.13c;locus_tag=SCO2839
NC_003888.3	RefSeq	CDS	3100609	3101196	.	-	0	ID=cds2801;Parent=gene2853;Dbxref=Genbank:NP_627068.1,GeneID:1098273;Name=NP_627068.1;Note=SCE20.13c%2C possible lipoprotein%2C len: 190 aa. Contains an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE20.13c;product=lipoprotein;protein_id=NP_627068.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3101131	3101163	.	-	.	ID=id3573;Dbxref=GeneID:1098273;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE20.13c
NC_003888.3	RefSeq	gene	3101313	3102206	.	+	.	ID=gene2854;Dbxref=GeneID:1098274;Name=SCE20.14.;gbkey=Gene;gene=SCE20.14.;gene_biotype=protein_coding;gene_synonym=SCE20.14.;locus_tag=SCO2840
NC_003888.3	RefSeq	CDS	3101313	3102206	.	+	0	ID=cds2802;Parent=gene2854;Dbxref=Genbank:NP_627069.1,GeneID:1098274;Name=NP_627069.1;Note=SCE20.14%2C possible LysR-family transcriptional regulatory protein%2C len: 297 aa. Similar to many other regulators including: Bacillus subtilis SW:ALSR_BACSU (EMBL:L04470%3B) als operon regulatory protein (302 aa). fasta scores opt: 373 z-score: 437.5 E(): 5.5e-17 26.6%25 identity in 286 aa overlap and Streptomyces lividans TR:Q9X9S5 (EMBL:Y18818) transcriptional regulator of LysR family (307 aa)%2C fasta scores opt: 449 z-score: 525.1 E(): 7.3e-22 34.0%25 identity in 303 aa overlap. Contains a Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family with a helix-turn-helix motif situated between residues 17..38 (+4.47 SD).;gbkey=CDS;gene=SCE20.14.;product=LysR family transcriptional regulator;protein_id=NP_627069.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3101343	3101747	.	+	.	ID=id3574;Dbxref=GeneID:1098274;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 66.40%2C E-value 6.2e-16;gbkey=misc_feature;gene=SCE20.14.
NC_003888.3	RefSeq	gene	3102196	3102936	.	-	.	ID=gene2855;Dbxref=GeneID:1098275;Name=SCE20.15c;gbkey=Gene;gene=SCE20.15c;gene_biotype=protein_coding;gene_synonym=SCE20.15c;locus_tag=SCO2841
NC_003888.3	RefSeq	CDS	3102196	3102936	.	-	0	ID=cds2803;Parent=gene2855;Dbxref=Genbank:NP_627070.1,GeneID:1098275;Name=NP_627070.1;Note=SCE20.15c%2C possible hypothetical protein%2C len: 246 aa%3B similar to TR:Q9L2D9 (EMBL:AL137187) Streptomyces coelicolor  hypothetical protein SC7A8.16c%2C 210 aa%3B fasta scores: opt: 493 Z-score: 488.6 E(): 1.4e-19%3B 40.580%25 identity in 207 aa overlap. Contains a possible membrane spanning hydrophobic domain;gbkey=CDS;gene=SCE20.15c;product=hypothetical protein;protein_id=NP_627070.1;transl_table=11
NC_003888.3	RefSeq	gene	3102939	3103493	.	-	.	ID=gene2856;Dbxref=GeneID:1098276;Name=SCE20.16c;gbkey=Gene;gene=SCE20.16c;gene_biotype=protein_coding;gene_synonym=SCE20.16c;locus_tag=SCO2842
NC_003888.3	RefSeq	CDS	3102939	3103493	.	-	0	ID=cds2804;Parent=gene2856;Dbxref=Genbank:NP_627071.1,GeneID:1098276;Name=NP_627071.1;Note=SCE20.16c%2C possible membrane protein%2Clen: 184 aa. Contains possible membrane spanning hydrophobic domain and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE20.16c;product=hypothetical protein;protein_id=NP_627071.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3103499	3103504	.	-	.	ID=id3575;gbkey=RBS
NC_003888.3	RefSeq	gene	3103597	3104376	.	-	.	ID=gene2857;Dbxref=GeneID:1098277;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;gene_synonym=nagD,SCE20.17c;locus_tag=SCO2843
NC_003888.3	RefSeq	CDS	3103597	3104376	.	-	0	ID=cds2805;Parent=gene2857;Dbxref=Genbank:NP_627072.1,GeneID:1098277;Name=NP_627072.1;Note=SCE20.17c%2C nagD%2C probable N-acetylglucosamine-6-phosphate deacetylase%2C len: 259 aa. Highly similar to Escherichia coli SW:NAGD_ECOLI(EMBL:X14135) possible N-acetylglucosamine-6-phosphate deacetylase NagD (250 aa)%2C fasta scores opt: 740 z-score: 847.6 E(): 0 43.0%25 identity in 249 aa overlap.;gbkey=CDS;gene=nagD;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=NP_627072.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3104385	3104389	.	-	.	ID=id3576;gbkey=RBS
NC_003888.3	RefSeq	gene	3104452	3104547	.	-	.	ID=gene2858;Dbxref=GeneID:1098278;Name=SCE20.18c;gbkey=Gene;gene=SCE20.18c;gene_biotype=protein_coding;gene_synonym=SCE20.18c;locus_tag=SCO2844
NC_003888.3	RefSeq	CDS	3104452	3104547	.	-	0	ID=cds2806;Parent=gene2858;Dbxref=Genbank:NP_627073.1,GeneID:1098278;Name=NP_627073.1;Note=SCE20.18c%2C doubtful CDS%2C len: 31 aa.;gbkey=CDS;gene=SCE20.18c;product=hypothetical protein;protein_id=NP_627073.1;transl_table=11
NC_003888.3	RefSeq	gene	3104547	3104891	.	-	.	ID=gene2859;Dbxref=GeneID:1098279;Name=SCE20.19c;gbkey=Gene;gene=SCE20.19c;gene_biotype=protein_coding;gene_synonym=SCE20.19c;locus_tag=SCO2845
NC_003888.3	RefSeq	CDS	3104547	3104891	.	-	0	ID=cds2807;Parent=gene2859;Dbxref=Genbank:NP_627074.1,GeneID:1098279;Name=NP_627074.1;Note=SCE20.19c%2C possible GntR-family transcriptional regulatory protein%2C len: 114 aa. Weakly similar to Streptomyces coelicolor TR:CAB60175(EMBL:AL132824) transcriptional regulator (245 aa)%2C fasta scores opt: 143 z-score: 180.9 E(): 0.011%2C 38.8%25 identity in 80 aa overlap and Bacillus subtilis TR:O34817(EMBL:AF017113) GntR family of transcriptional regulator YvoA (243 aa)%2C fasta scores opt: 198 z-score: 245.5 E(): 2.7e-06. 38.1%25 identity in 97 aa overlap. Contains a Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family with a helix-turn-helix motif situated between residues 25..46 (+4.27 SD).;gbkey=CDS;gene=SCE20.19c;product=GntR family transcriptional regulator;protein_id=NP_627074.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3104703	3104873	.	-	.	ID=id3577;Dbxref=GeneID:1098279;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 33.30%2C E-value 1e-08;gbkey=misc_feature;gene=SCE20.19c
NC_003888.3	RefSeq	gene	3105013	3106233	.	-	.	ID=gene2860;Dbxref=GeneID:1098280;Name=SCE20.20c;gbkey=Gene;gene=SCE20.20c;gene_biotype=protein_coding;gene_synonym=SCE20.20c;locus_tag=SCO2846
NC_003888.3	RefSeq	CDS	3105013	3106233	.	-	0	ID=cds2808;Parent=gene2860;Dbxref=Genbank:NP_627075.1,GeneID:1098280;Name=NP_627075.1;Note=SCE20.20c%2C possible transcriptional regulatory protein%2C len: 406 aa. Similar in parts to several proteins of the ROK (NagC/XylR) family including: Bacillus subtilis SW:GLK_BACSU (EMBL:D84432) glucokinase (EC 2.7.1.2) (glucose kinase) (321 aa)%2C fasta scores opt: 320 z-score: 310.6 E(): 6.4e-10 34.1%25 identity in 164 aa overlap and Thermotoga maritima TR:Q9X1I0 (EMBL:AE001798) glucokinase (317 aa)%2C fasta scores opt: 385 z-score: 370.1 E(): 3.1e-13 33.6%25 identity in 360 aa overlap. Contains a Prosite hits to PS01125 ROK family signature and PS01228 Hypothetical cof family signature 1. Also contains a Pfam match to entry PF00480 ROK%2C ROK family and a helix-turn-helix motif situated between residues 45..66 (+5.25 SD).;gbkey=CDS;gene=SCE20.20c;product=transcriptional regulator;protein_id=NP_627075.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3105313	3105705	.	-	.	ID=id3578;Dbxref=GeneID:1098280;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 73.90%2C E-value 6.6e-21;gbkey=misc_feature;gene=SCE20.20c
NC_003888.3	RefSeq	sequence_feature	3105379	3105462	.	-	.	ID=id3579;Dbxref=GeneID:1098280;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SCE20.20c
NC_003888.3	RefSeq	sequence_feature	3105865	3105900	.	-	.	ID=id3580;Dbxref=GeneID:1098280;Note=PS01228 Hypothetical cof family signature 1;gbkey=misc_feature;gene=SCE20.20c
NC_003888.3	RefSeq	ribosome_entry_site	3106245	3106248	.	-	.	ID=id3581;gbkey=RBS
NC_003888.3	RefSeq	gene	3106290	3107372	.	+	.	ID=gene2861;Dbxref=GeneID:1098281;Name=SCE20.21;gbkey=Gene;gene=SCE20.21;gene_biotype=protein_coding;gene_synonym=SCE20.21;locus_tag=SCO2847
NC_003888.3	RefSeq	CDS	3106290	3107372	.	+	0	ID=cds2809;Parent=gene2861;Dbxref=Genbank:NP_627076.1,GeneID:1098281;Name=NP_627076.1;Note=SCE20.21%2C possible oxidoreductase%2C len: 360 aa. Similar to several other oxidoreductases e.g. Escherichia coli SW:YDGJ_ECOLI(EMBL:AE000258) hypothetical oxidoreductase (346 aa)%2C fasta scores opt: 873 z-score: 972.9 E():0 45.0%25 identity in 353 aa overlap. Contains a Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=SCE20.21;product=oxidoreductase;protein_id=NP_627076.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3106320	3107051	.	+	.	ID=id3582;Dbxref=GeneID:1098281;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 203.00%2C E-value 4.5e-57;gbkey=misc_feature;gene=SCE20.21
NC_003888.3	RefSeq	gene	3107369	3107845	.	+	.	ID=gene2862;Dbxref=GeneID:1098282;Name=SCE20.22;gbkey=Gene;gene=SCE20.22;gene_biotype=protein_coding;gene_synonym=SCE20.22;locus_tag=SCO2848
NC_003888.3	RefSeq	CDS	3107369	3107845	.	+	0	ID=cds2810;Parent=gene2862;Dbxref=Genbank:NP_627077.1,GeneID:1098282;Name=NP_627077.1;Note=SCE20.22%2C unknown%2C len: 158 aa. Similar to several proteins of undefined function e.g. Rhizobium meliloti SW:YPMI_RHIME(EMBL:M96584) hypothetical 18.2 KD protein (164 aa)%2C fasta scores opt: 434 z-score: 540.5 E(): 1e-22 49.7%25 identity in 143 aa overlap. Also similar to Saccharomyces cerevisiae SW:YBY7_YEAST(EMBL:X75891) hypothetical 20.5 KD protein (179 aa)%2C fasta scores opt: 278 z-score: 350.5 E(): 3.8e-12 38.8%25 identity in 152 aa overlap;gbkey=CDS;gene=SCE20.22;product=hypothetical protein;protein_id=NP_627077.1;transl_table=11
NC_003888.3	RefSeq	gene	3107953	3108825	.	+	.	ID=gene2863;Dbxref=GeneID:1098283;Name=SCE20.23;gbkey=Gene;gene=SCE20.23;gene_biotype=protein_coding;gene_synonym=SCE20.23;locus_tag=SCO2849
NC_003888.3	RefSeq	CDS	3107953	3108825	.	+	0	ID=cds2811;Parent=gene2863;Dbxref=Genbank:NP_627078.1,GeneID:1098283;Name=NP_627078.1;Note=SCE20.23%2C unknown%2C len: 290 aa. Similar to a protein of undefined function from Mycobacterium tuberculosis TR:O06328(EMBL:Z95390) hypothetical 30.7 KD protein (285 aa)%2C fasta scores opt: 770 z-score: 928.4 E(): 0 48.6%25 identity in 247 aa overlap.;gbkey=CDS;gene=SCE20.23;product=hypothetical protein;protein_id=NP_627078.1;transl_table=11
NC_003888.3	RefSeq	gene	3109095	3109952	.	-	.	ID=gene2864;Dbxref=GeneID:1098284;Name=SCE20.24c;gbkey=Gene;gene=SCE20.24c;gene_biotype=protein_coding;gene_synonym=SCE20.24c;locus_tag=SCO2850
NC_003888.3	RefSeq	CDS	3109095	3109952	.	-	0	ID=cds2812;Parent=gene2864;Dbxref=Genbank:NP_627079.1,GeneID:1098284;Name=NP_627079.1;Note=SCE20.24c%2C possible 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase%2C len: 285 aa. Similar to many including: Mycobacterium tuberculosis TR:O53242 (EMBL:AL021287) possible 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (239 aa)%2C fasta scores opt: 544 z-score: 651.1 E(): 7e-29 40.3%25 identity in 221 aa overlap and similar in parts to the C-terminus of Escherichia coli SW:HPCE_ECOLI (EMBL:X75028) 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (EC 5.3.3.-) (405 aa)%2C fasta scores opt: 467 z-score: 556.6 E(): 1.3e-23 40.2%25 identity in 214 aa overlap. Also similar to Streptomyces coelicolor TR:CAB55708 (EMBL:AL117387)  2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase SCF41.05 (292 aa)%2C fasta scores opt: 1142 z-score: 1213.4 E():0 61.5%25 identity in 286 aa overlap. Contains a Pfam match to entry PF01557 FAA_hydrolase%2C Fumarylacetoacetate (FAA) hydrolase family.;gbkey=CDS;gene=SCE20.24c;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=NP_627079.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3109185	3109685	.	-	.	ID=id3583;Dbxref=GeneID:1098284;Note=Pfam match to entry PF01557 FAA_hydrolase%2C Fumarylacetoacetate (FAA) hydrolase family%2C score 229.90%2C E-value 3.6e-65;gbkey=misc_feature;gene=SCE20.24c
NC_003888.3	RefSeq	ribosome_entry_site	3109962	3109966	.	-	.	ID=id3584;gbkey=RBS
NC_003888.3	RefSeq	gene	3110120	3110833	.	-	.	ID=gene2865;Dbxref=GeneID:1098285;Name=SCE20.25c;gbkey=Gene;gene=SCE20.25c;gene_biotype=protein_coding;gene_synonym=SCE20.25c;locus_tag=SCO2851
NC_003888.3	RefSeq	CDS	3110120	3110833	.	-	0	ID=cds2813;Parent=gene2865;Dbxref=Genbank:NP_627080.1,GeneID:1098285;Name=NP_627080.1;Note=SCE20.25c%2C possible membrane protein%2C len: 237 aa. Similar in parts to many bacterial inner membrane proteins e.g. Streptomyces coelicolor TR:O54569(EMBL:Y16311) inner membrane protein%2C STH24.05 (431 aa)%2C fasta scores opt: 240 z-score: 285.1 E(): 1.7e-08 25.0%25 identity in 232 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCE20.25c;product=hypothetical protein;protein_id=NP_627080.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3110846	3110850	.	-	.	ID=id3585;gbkey=RBS
NC_003888.3	RefSeq	gene	3110947	3111282	.	-	.	ID=gene2866;Dbxref=GeneID:1098286;Name=SCE20.26c;gbkey=Gene;gene=SCE20.26c;gene_biotype=protein_coding;gene_synonym=SCE20.26c;locus_tag=SCO2852
NC_003888.3	RefSeq	CDS	3110947	3111282	.	-	0	ID=cds2814;Parent=gene2866;Dbxref=Genbank:NP_627081.1,GeneID:1098286;Name=NP_627081.1;Note=SCE20.26c%2C possible membrane protein%2C len: 111 aa. Contains a possible N-terminal membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCE20.26c;product=hypothetical protein;protein_id=NP_627081.1;transl_table=11
NC_003888.3	RefSeq	gene	3111340	3111894	.	-	.	ID=gene2867;Dbxref=GeneID:1098287;Name=SCE20.27c;gbkey=Gene;gene=SCE20.27c;gene_biotype=protein_coding;gene_synonym=SCE20.27c;locus_tag=SCO2853
NC_003888.3	RefSeq	CDS	3111340	3111894	.	-	0	ID=cds2815;Parent=gene2867;Dbxref=Genbank:NP_627082.1,GeneID:1098287;Name=NP_627082.1;Note=SCE20.27c%2C unknown%2C len: 184 aa. Similar to many proteins of unknown function including: Mycobacterium tuberculosis SW:YU95_MYCTU(EMBL:Z95150) hypothetical 17.8 KD protein (158 aa)%2C fasta scores opt: 396 z-score: 478.9 E(): 2.7e-19 42.6%25 identity in 141 aa overlap and Streptomyces coelicolor TR:O86588(EMBL:AL031514) hypothetical 23.3 KD protein SC2H4.05 (216 aa)%2C fasta scores opt: 294 z-score: 357.1 E(): 1.7e-12 44.6%25 identity in 112 aa overlap. Contains a Pfam match to entry PF01638 DUF24%2C Protein of unknown function;gbkey=CDS;gene=SCE20.27c;product=hypothetical protein;protein_id=NP_627082.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3111550	3111819	.	-	.	ID=id3586;Dbxref=GeneID:1098287;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function%2C score 78.50%2C E-value 1.4e-19;gbkey=misc_feature;gene=SCE20.27c
NC_003888.3	RefSeq	ribosome_entry_site	3111901	3111905	.	-	.	ID=id3587;gbkey=RBS
NC_003888.3	RefSeq	gene	3111998	3113431	.	+	.	ID=gene2868;Dbxref=GeneID:1098288;Name=SCE20.28;gbkey=Gene;gene=SCE20.28;gene_biotype=protein_coding;gene_synonym=SCE20.28;locus_tag=SCO2854
NC_003888.3	RefSeq	CDS	3111998	3113431	.	+	0	ID=cds2816;Parent=gene2868;Dbxref=Genbank:NP_627083.1,GeneID:1098288;Name=NP_627083.1;Note=SCE20.28%2C possible transmembrane efflux protein%2C len: 477 aa. Similar to many including: Mycobacterium smegmatis TR:Q50392(EMBL:U40487) proton antiporter efflux pump (504 aa)%2C fasta scores opt: 626 z-score: 586.9 E(): 2.6e-25 32.1%25 identity in 471 aa overlap and Streptomyces coelicolor TR:Q9ZBW5(EMBL:AL034443) integral membrane efflux protein SC4B5.03C (504 aa)%2C fasta scores opt: 729 z-score: 681.9 E(): 1.3e-30 36.6%25 identity in 435 aa overlap. Contains a Prosite hit to PS00216 Sugar transport proteins signature 1 and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCE20.28;product=transmembrane efflux protein;protein_id=NP_627083.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3112283	3112336	.	+	.	ID=id3588;Dbxref=GeneID:1098288;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCE20.28
NC_003888.3	RefSeq	gene	3113643	3114659	.	+	.	ID=gene2869;Dbxref=GeneID:1098289;Name=SCE20.29;gbkey=Gene;gene=SCE20.29;gene_biotype=protein_coding;gene_synonym=SCE20.29;locus_tag=SCO2855
NC_003888.3	RefSeq	CDS	3113643	3114659	.	+	0	ID=cds2817;Parent=gene2869;Dbxref=Genbank:NP_627084.1,GeneID:1098289;Name=NP_627084.1;Note=SCE20.29%2C unknown%2C len: 338 aa.;gbkey=CDS;gene=SCE20.29;product=hypothetical protein;protein_id=NP_627084.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3114750	3114754	.	+	.	ID=id3589;gbkey=RBS
NC_003888.3	RefSeq	gene	3114765	3115223	.	+	.	ID=gene2870;Dbxref=GeneID:1098290;Name=SCE20.30;gbkey=Gene;gene=SCE20.30;gene_biotype=protein_coding;gene_synonym=SCE20.30;locus_tag=SCO2856
NC_003888.3	RefSeq	CDS	3114765	3115223	.	+	0	ID=cds2818;Parent=gene2870;Dbxref=Genbank:NP_627085.1,GeneID:1098290;Name=NP_627085.1;Note=SCE20.30%2C unknown%2C len: 152 aa. Similar to another protein of unknown function from Streptomyces coelicolor TR:O86819(EMBL:AL031031) SC7C7.14 (161 aa)%2C fasta scores opt: 152 z-score: 189.7 E(): 0.0035 31.7%25 identity in 123 aa overlap.;gbkey=CDS;gene=SCE20.30;product=hypothetical protein;protein_id=NP_627085.1;transl_table=11
NC_003888.3	RefSeq	gene	3115344	3115688	.	-	.	ID=gene2871;Dbxref=GeneID:1098291;Name=SCE20.31c;gbkey=Gene;gene=SCE20.31c;gene_biotype=protein_coding;gene_synonym=SCE20.31c;locus_tag=SCO2857
NC_003888.3	RefSeq	CDS	3115344	3115688	.	-	0	ID=cds2819;Parent=gene2871;Dbxref=Genbank:NP_627086.1,GeneID:1098291;Name=NP_627086.1;Note=SCE20.31c%2C possible membrane protein%2C len: 114 aa. Contains possible membrane spanning hydrophobic domains and an N-terminal signal sequence.;gbkey=CDS;gene=SCE20.31c;product=hypothetical protein;protein_id=NP_627086.1;transl_table=11
NC_003888.3	RefSeq	gene	3115703	3115960	.	-	.	ID=gene2872;Dbxref=GeneID:1098292;Name=SCE20.32c;gbkey=Gene;gene=SCE20.32c;gene_biotype=protein_coding;gene_synonym=SCE20.32c;locus_tag=SCO2858
NC_003888.3	RefSeq	CDS	3115703	3115960	.	-	0	ID=cds2820;Parent=gene2872;Dbxref=Genbank:NP_627087.1,GeneID:1098292;Name=NP_627087.1;Note=SCE20.32c%2C unknown%2C len: 85 aa.;gbkey=CDS;gene=SCE20.32c;product=hypothetical protein;protein_id=NP_627087.1;transl_table=11
NC_003888.3	RefSeq	gene	3115957	3116334	.	-	.	ID=gene2873;Dbxref=GeneID:1098293;Name=SCE20.33c;gbkey=Gene;gene=SCE20.33c;gene_biotype=protein_coding;gene_synonym=SCE20.33c;locus_tag=SCO2859
NC_003888.3	RefSeq	CDS	3115957	3116334	.	-	0	ID=cds2821;Parent=gene2873;Dbxref=Genbank:NP_627088.1,GeneID:1098293;Name=NP_627088.1;Note=SCE20.33c%2C unknown%2C len: 125 aa. Similar several other proteins of unknown function e.g. from Lactococcus lactis TR:O87247(EMBL:AE001272) conserved hypothetical protein (114 aa)%2C fasta scores opt: 226 z-score: 311.1 E(): 6e-10 35.1%25 identity in 94 aa overlap.;gbkey=CDS;gene=SCE20.33c;product=hypothetical protein;protein_id=NP_627088.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3116382	3116488	.	+	.	ID=id3590;Note=repeat region containing 2x GGGGGCCC and 9xCCCGGCGG repeated sequences.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3116521	3116931	.	-	.	ID=gene2874;Dbxref=GeneID:1098294;Name=arr;gbkey=Gene;gene=arr;gene_biotype=protein_coding;gene_synonym=arr;locus_tag=SCO2860
NC_003888.3	RefSeq	CDS	3116521	3116931	.	-	0	ID=cds2822;Parent=gene2874;Dbxref=Genbank:NP_627089.1,GeneID:1098294;Name=NP_627089.1;Note=SCE20.34c%2C arr%2C rifampin ADP-ribosyl transferase%2C len 136 aa. Highly similar to Mycobacterium smegmatis TR:O67972 (EMBL:AF001493) rifampin ADP-ribosyl transferase (143 aa)%2C fasta scores opt: 487 z-score: 611.8 E(): 1.1e-26 53.0%25 identity in 134 aa overlap and Pseudomonas aeruginosa TR:O87490 (EMBL:AF078527) ribosylating transferase ARR-2 (150 aa)%2C fasta scores opt: 429 z-score: 540.3 E(): 1e-22 50.0%25 identity in 128 aa overlap;gbkey=CDS;gene=arr;product=rifampin ADP-ribosyl transferase;protein_id=NP_627089.1;transl_table=11
NC_003888.3	RefSeq	gene	3117159	3117881	.	+	.	ID=gene2875;Dbxref=GeneID:1098295;Name=SCE20.35.;gbkey=Gene;gene=SCE20.35.;gene_biotype=protein_coding;gene_synonym=SCE20.35.;locus_tag=SCO2861
NC_003888.3	RefSeq	CDS	3117159	3117881	.	+	0	ID=cds2823;Parent=gene2875;Dbxref=Genbank:NP_627090.1,GeneID:1098295;Name=NP_627090.1;Note=SCE20.35%2C unknown%2C len: 240 aa.;gbkey=CDS;gene=SCE20.35.;product=hypothetical protein;protein_id=NP_627090.1;transl_table=11
NC_003888.3	RefSeq	gene	3117978	3118211	.	-	.	ID=gene2876;Dbxref=GeneID:1098296;Name=SCE20.36c;gbkey=Gene;gene=SCE20.36c;gene_biotype=protein_coding;gene_synonym=SCE20.36c;locus_tag=SCO2862
NC_003888.3	RefSeq	CDS	3117978	3118211	.	-	0	ID=cds2824;Parent=gene2876;Dbxref=Genbank:NP_627091.1,GeneID:1098296;Name=NP_627091.1;Note=SCE20.36c%2C unknown%2C len: 77 aa.;gbkey=CDS;gene=SCE20.36c;product=hypothetical protein;protein_id=NP_627091.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3118347	3118350	.	+	.	ID=id3591;gbkey=RBS
NC_003888.3	RefSeq	gene	3118362	3121199	.	+	.	ID=gene2877;Dbxref=GeneID:1098297;Name=SCE20.37;gbkey=Gene;gene=SCE20.37;gene_biotype=protein_coding;gene_synonym=SCE20.37;locus_tag=SCO2863
NC_003888.3	RefSeq	CDS	3118362	3121199	.	+	0	ID=cds2825;Parent=gene2877;Dbxref=Genbank:NP_627092.1,GeneID:1098297;Name=NP_627092.1;Note=SCE20.37%2C possible helicase%2C len: 945 aa. Weakly similar to Saccharomyces cerevisiae (Baker's yeast) TR:Q06683(EMBL:U32517) DEAD box family helicase family protein (689 aa)%2C fasta scores opt: 455 z-score: 511.5 E(): 4.1e-21 27.2%25 identity in 357 aa overlap. Also weakly similar to several bacteriophage proteins including: Lactococcus bacteriophage (isolate 7-9) SW:V51K_BPL79 (EMBL:M36388) 51.5 KD protein which may play a role in either regulating bacteriophage replication or bacteriophage specific genes (452 aa)%2C fasta scores opt: 407 z-score: 460.0 E(): 3.1e-18 27.4%25 identity in 328 aa overlap. Contains Prosite hit to 2xPS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain.;gbkey=CDS;gene=SCE20.37;product=helicase;protein_id=NP_627092.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3119097	3119120	.	+	.	ID=id3592;Dbxref=GeneID:1098297;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE20.37
NC_003888.3	RefSeq	sequence_feature	3119778	3120023	.	+	.	ID=id3593;Dbxref=GeneID:1098297;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 63.30%2C E-value 5.3e-15;gbkey=misc_feature;gene=SCE20.37
NC_003888.3	RefSeq	sequence_feature	3121041	3121064	.	+	.	ID=id3594;Dbxref=GeneID:1098297;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE20.37
NC_003888.3	RefSeq	gene	3121344	3121892	.	-	.	ID=gene2878;Dbxref=GeneID:1098298;Name=SCE6.01c;gbkey=Gene;gene=SCE6.01c;gene_biotype=protein_coding;gene_synonym=SCE6.01c;locus_tag=SCO2864
NC_003888.3	RefSeq	CDS	3121344	3121892	.	-	0	ID=cds2826;Parent=gene2878;Dbxref=Genbank:NP_733585.1,GeneID:1098298;Name=NP_733585.1;Note=SCE6.01c%2C unknown%2C partial CDS%2C len: > 183 aa. Similar to several proteins of undefined function e.g. Streptomyces coelicolor TR:Q9XD95(EMBL:AF106004) hypothetical 15.4 KD protein found within the whiJ sporulation regulatory locus (141 aa)%2C fasta scores opt: 232 z-score: 304.9 E(): 1.5e-09 37.4%25 identity in 131 aa overlap and Streptomyces coelicolor TR:Q9ZBT2(EMBL:AL034446) regulatory protein%2C SC1A9.20 (135 aa)%2C fasta scores opt: 201 z-score: 266.1 E(): 2.2e-07 38.3%25 identity in 120 aa overlap.;end_range=3121892,.;gbkey=CDS;gene=SCE6.01c;partial=true;product=hypothetical protein;protein_id=NP_733585.1;start_range=.,3121344;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3122078	3122082	.	+	.	ID=id3595;gbkey=RBS
NC_003888.3	RefSeq	gene	3122091	3122933	.	+	.	ID=gene2879;Dbxref=GeneID:1098299;Name=SCE6.02;gbkey=Gene;gene=SCE6.02;gene_biotype=protein_coding;gene_synonym=SCE6.02;locus_tag=SCO2865
NC_003888.3	RefSeq	CDS	3122091	3122933	.	+	0	ID=cds2827;Parent=gene2879;Dbxref=Genbank:NP_627093.1,GeneID:1098299;Name=NP_627093.1;Note=SCE6.02%2C possible regulatory protein%2C len: 280 aa. Similar to several proteins of undefined function including: Streptomyces albulus TR:BAA89264 (EMBL:AB025200) hypothetical protein ORF312 (285 aa)%2C fasta scores opt: 585 z-score: 728.2 E():0 38.2%25 identity in 280 aa overlap and Streptomyces coelicolor TR:Q9Z543 (EMBL:AL035212) DNA binding protein%2C SC9B2.16C (303 aa)%2C fasta scores opt: 313 z-score: 391.9 E(): 2.1e-14 31.0%25 identity in 284 aa overlap. Also weakly similar to SCE6.06%2C also located on this cosmid%2C fasta scores opt: 269 z-score: 293.0 E(): 8.1e-11 27.5%25 identity in 265 aa overlap. Contains a Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix with the helix-turn-helix motif situated between residues 25..46 (+5.35 SD).;gbkey=CDS;gene=SCE6.02;product=regulatory protein;protein_id=NP_627093.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3122136	3122300	.	+	.	ID=id3596;Dbxref=GeneID:1098299;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 26.10%2C E-value 0.00082;gbkey=misc_feature;gene=SCE6.02
NC_003888.3	RefSeq	gene	3123223	3123477	.	+	.	ID=gene2880;Dbxref=GeneID:1098300;Name=SCE6.03;gbkey=Gene;gene=SCE6.03;gene_biotype=protein_coding;gene_synonym=SCE6.03;locus_tag=SCO2866
NC_003888.3	RefSeq	CDS	3123223	3123477	.	+	0	ID=cds2828;Parent=gene2880;Dbxref=Genbank:NP_627094.1,GeneID:1098300;Name=NP_627094.1;Note=SCE6.03%2C unknown%2C len: 84 aa.;gbkey=CDS;gene=SCE6.03;product=hypothetical protein;protein_id=NP_627094.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3123669	3123673	.	+	.	ID=id3597;gbkey=RBS
NC_003888.3	RefSeq	gene	3123679	3123906	.	+	.	ID=gene2881;Dbxref=GeneID:1098301;Name=SCE6.04;gbkey=Gene;gene=SCE6.04;gene_biotype=protein_coding;gene_synonym=SCE6.04;locus_tag=SCO2867
NC_003888.3	RefSeq	CDS	3123679	3123906	.	+	0	ID=cds2829;Parent=gene2881;Dbxref=Genbank:NP_627095.1,GeneID:1098301;Name=NP_627095.1;Note=SCE6.04%2C unknown%2C len: 75 aa. Similar to another hypothetical protein from Streptomyces coelicolor TR:CAB53305 (EMBL:AL109973) SCJ30.10C (92 aa)%2C fasta scores opt: 101 z-score: 154.5 E(): 0.35 32.1%25 identity in 81 aa overlap.;gbkey=CDS;gene=SCE6.04;product=hypothetical protein;protein_id=NP_627095.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3123906	3123910	.	+	.	ID=id3598;gbkey=RBS
NC_003888.3	RefSeq	gene	3123914	3124393	.	+	.	ID=gene2882;Dbxref=GeneID:1098302;Name=SCE6.05;gbkey=Gene;gene=SCE6.05;gene_biotype=protein_coding;gene_synonym=SCE6.05;locus_tag=SCO2868
NC_003888.3	RefSeq	CDS	3123914	3124393	.	+	0	ID=cds2830;Parent=gene2882;Dbxref=Genbank:NP_627096.1,GeneID:1098302;Name=NP_627096.1;Note=SCE6.05%2C hypothetical protein%2C len: 159 aa. The C-terminus shares 54.1%25 identity in 74 aa overlap with Streptomyces coelicolor TR:CAB53304(EMBL:AL109973) hypothetical 10.9 KD protein%2C SCJ30.09C (96 aa)%3B similar also to the SCP1 plasmid borne TR:Q9ACW6 (EMBL:AL590464) Streptomyces coelicolor conserved hypothetical protein SCP1.185%2C 184 aa%3B fasta scores: opt: 520 Z-score: 652.0 E(): 1.1e-28%3B 49.390%25 identity in 164 aa overlap;gbkey=CDS;gene=SCE6.05;product=hypothetical protein;protein_id=NP_627096.1;transl_table=11
NC_003888.3	RefSeq	gene	3124417	3125262	.	+	.	ID=gene2883;Dbxref=GeneID:1098303;Name=SCE6.06;gbkey=Gene;gene=SCE6.06;gene_biotype=protein_coding;gene_synonym=SCE6.06;locus_tag=SCO2869
NC_003888.3	RefSeq	CDS	3124417	3125262	.	+	0	ID=cds2831;Parent=gene2883;Dbxref=Genbank:NP_627097.1,GeneID:1098303;Name=NP_627097.1;Note=SCE6.06%2C possible regulatory protein%2C len: 281 aa. Similar to several proteins of undefined function e.g. Streptomyces albulus TR:BAA89264(EMBL: AB025200) plasmid pNO33 protein ORF312 (285 aa)%2C fasta scores opt: 356 z-score: 441.0 E(): 3.9e-17 30.9%25 identity in 282 aa overlap. Also weakly similar to SCE6.02%2C also located on this cosmid%2C fasta scores opt: 269 z-score: 293.0 E(): 8.1e-11 27.5%25 identity in 265 aa overlap. Contains a helix-turn-helix motif situated between residues 27..48 (+4.07 SD).;gbkey=CDS;gene=SCE6.06;product=regulatory protein;protein_id=NP_627097.1;transl_table=11
NC_003888.3	RefSeq	gene	3125334	3125630	.	+	.	ID=gene2884;Dbxref=GeneID:1098304;Name=SCE6.07;gbkey=Gene;gene=SCE6.07;gene_biotype=protein_coding;gene_synonym=SCE6.07;locus_tag=SCO2870
NC_003888.3	RefSeq	CDS	3125334	3125630	.	+	0	ID=cds2832;Parent=gene2884;Dbxref=Genbank:NP_627098.1,GeneID:1098304;Name=NP_627098.1;Note=SCE6.07%2C unknown%2C len: 98 aa.;gbkey=CDS;gene=SCE6.07;product=hypothetical protein;protein_id=NP_627098.1;transl_table=11
NC_003888.3	RefSeq	gene	3125634	3126614	.	+	.	ID=gene2885;Dbxref=GeneID:1098305;Name=SCE6.08;gbkey=Gene;gene=SCE6.08;gene_biotype=protein_coding;gene_synonym=SCE6.08;locus_tag=SCO2871
NC_003888.3	RefSeq	CDS	3125634	3126614	.	+	0	ID=cds2833;Parent=gene2885;Dbxref=Genbank:NP_627099.1,GeneID:1098305;Name=NP_627099.1;Note=SCE6.08%2C unknown%2C len: 326 aa. Similar to Streptomyces coelicolor TR:CAB69667(EMBL:AL137165) hypothetical 34.9 kd protein%2C SCF42.05 (328 aa)%2C fasta scores opt: 371 z-score: 450.8 E(): 1.1e-17 35.6%25 identity in 334 aa overlap.;gbkey=CDS;gene=SCE6.08;product=hypothetical protein;protein_id=NP_627099.1;transl_table=11
NC_003888.3	RefSeq	gene	3126611	3127843	.	+	.	ID=gene2886;Dbxref=GeneID:1098306;Name=SCE6.09;gbkey=Gene;gene=SCE6.09;gene_biotype=protein_coding;gene_synonym=SCE6.09;locus_tag=SCO2872
NC_003888.3	RefSeq	CDS	3126611	3127843	.	+	0	ID=cds2834;Parent=gene2886;Dbxref=Genbank:NP_627100.1,GeneID:1098306;Name=NP_627100.1;Note=SCE6.09%2C unknown%2C len: 410 aa. Weakly similar to several methyltransferase e.g. Streptomyces coelicolor TR:CAB71208(EMBL:AL138538) O-methyltransferase%2C SC6D10.13C (324 aa)%2C fasta scores opt: 337 z-score: 387.6 E(): 3.7e-14 37.2%25 identity in 277 aa overlap.;gbkey=CDS;gene=SCE6.09;product=hypothetical protein;protein_id=NP_627100.1;transl_table=11
NC_003888.3	RefSeq	gene	3127894	3128439	.	-	.	ID=gene2887;Dbxref=GeneID:1098307;Name=SCE6.10c;gbkey=Gene;gene=SCE6.10c;gene_biotype=protein_coding;gene_synonym=SCE6.10c;locus_tag=SCO2873
NC_003888.3	RefSeq	CDS	3127894	3128439	.	-	0	ID=cds2835;Parent=gene2887;Dbxref=Genbank:NP_627101.1,GeneID:1098307;Name=NP_627101.1;Note=SCE6.10c%2C unknown%2C len: 181 aa. Shows weak similarity to Streptomyces coelicolor TR:CAB51981 (EMBL:AL109663) hypothetical protein%2C SC4A10.05C (160 aa)%2C fasta scores opt: 171 z-score: 221.2 E(): 6.9e-05 32.7%25 identity in 156 aa overlap.;gbkey=CDS;gene=SCE6.10c;product=hypothetical protein;protein_id=NP_627101.1;transl_table=11
NC_003888.3	RefSeq	gene	3128619	3129590	.	-	.	ID=gene2888;Dbxref=GeneID:1098308;Name=SCE6.11c;gbkey=Gene;gene=SCE6.11c;gene_biotype=protein_coding;gene_synonym=SCE6.11c;locus_tag=SCO2874
NC_003888.3	RefSeq	CDS	3128619	3129590	.	-	0	ID=cds2836;Parent=gene2888;Dbxref=Genbank:NP_627102.1,GeneID:1098308;Name=NP_627102.1;Note=SCE6.11c%2C possible oxidoreductase%2C len: 323 aa. Similar to several other members of the short-chain dehydrogenases/reductases family including: Streptomyces antibioticus SW:OXIR_STRAT(EMBL:M96551) probable oxidoreductase (298 aa)%2C fasta scores opt: 641 z-score: 722.8 E(): 7.9e-33 43.4%25 identity in 304 aa overlap and Streptomyces coelicolor TR:AAF26372(EMBL:AF204735) NADP-dependent oxidoreductase (297 aa)%2C fasta scores opt: 670 z-score: 755.1 E(): 0 43.9%25 identity in 289 aa overlap. Contains a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SCE6.11c;product=oxidoreductase;protein_id=NP_627102.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3128928	3129500	.	-	.	ID=id3599;Dbxref=GeneID:1098308;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 50.10%2C E-value 4.8e-11;gbkey=misc_feature;gene=SCE6.11c
NC_003888.3	RefSeq	gene	3129670	3130077	.	+	.	ID=gene2889;Dbxref=GeneID:1098309;Name=SCE6.12;gbkey=Gene;gene=SCE6.12;gene_biotype=protein_coding;gene_synonym=SCE6.12;locus_tag=SCO2875
NC_003888.3	RefSeq	CDS	3129670	3130077	.	+	0	ID=cds2837;Parent=gene2889;Dbxref=Genbank:NP_627103.1,GeneID:1098309;Name=NP_627103.1;Note=SCE6.12%2C possible MerR-family transcriptional regulator%2C len: 135 aa. Similar to many regulators e.g. Haemophilus influenzae SW:Y186_HAEIN(EMBL:U32704) hypothetical transcriptional regulator (135 aa)%2C fasta scores opt: 233 z-score: 315.6 E(): 3.8e-10 33.9%25 identity in 121 aa overlap. Also similar to Streptomyces coelicolor TR:CAB62710(EMBL:AL133423) MerR-family transcriptional regulator%2C SC4A7.06C (196 aa)%2C fasta scores opt: 295 z-score: 393.5 E(): 1.7e-14 41.2%25 identity in 119 aa overlap. Contains a Prosite hit to PS00552 Bacterial regulatory proteins%2C merR family signature and a Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family with a helix-turn-helix motif situated between residues 6..27 (+4.68 SD).;gbkey=CDS;gene=SCE6.12;product=MerR family transcriptional regulator;protein_id=NP_627103.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3129694	3129804	.	+	.	ID=id3600;Dbxref=GeneID:1098309;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 56.50%2C E-value 5.9e-13;gbkey=misc_feature;gene=SCE6.12
NC_003888.3	RefSeq	sequence_feature	3129694	3129762	.	+	.	ID=id3601;Dbxref=GeneID:1098309;Note=PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=misc_feature;gene=SCE6.12
NC_003888.3	RefSeq	gene	3130105	3130731	.	+	.	ID=gene2890;Dbxref=GeneID:1098310;Name=SCE6.13;gbkey=Gene;gene=SCE6.13;gene_biotype=protein_coding;gene_synonym=SCE6.13;locus_tag=SCO2876
NC_003888.3	RefSeq	CDS	3130105	3130731	.	+	0	ID=cds2838;Parent=gene2890;Dbxref=Genbank:NP_627104.1,GeneID:1098310;Name=NP_627104.1;Note=SCE6.13%2C possible acetyltransferase%2C len: 208 aa. Similar to several including: Escherichia coli SW:ATDA_ECOLI(EMBL:D25276) spermidine N1-acetyltransferase (EC 2.3.1.57) (185 aa)%2C fasta scores opt: 208 z-score: 273.6 E(): 8.2e-08 25.3%25 identity in 158 aa overlap and Streptomyces coelicolor TR:CAB76075(EMBL:AL157953) acetyltransferase%2C SCL11.12C (232 aa)%2C fasta scores opt: 287 z-score: 372.5 E(): 2.6e-13 33.7%25 identity in 187 aa overlap. Contains a Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCE6.13;product=acetyltransferase;protein_id=NP_627104.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3130207	3130620	.	+	.	ID=id3602;Dbxref=GeneID:1098310;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 23.40%2C E-value 0.0052;gbkey=misc_feature;gene=SCE6.13
NC_003888.3	RefSeq	gene	3130825	3131211	.	+	.	ID=gene2891;Dbxref=GeneID:1098311;Name=SCE6.14;gbkey=Gene;gene=SCE6.14;gene_biotype=protein_coding;gene_synonym=SCE6.14;locus_tag=SCO2877
NC_003888.3	RefSeq	CDS	3130825	3131211	.	+	0	ID=cds2839;Parent=gene2891;Dbxref=Genbank:NP_627105.1,GeneID:1098311;Name=NP_627105.1;Note=SCE6.14%2C possible membrane protein%2C len: 128 aa. Contains an N-terminal membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCE6.14;product=hypothetical protein;protein_id=NP_627105.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3131341	3131345	.	+	.	ID=id3603;gbkey=RBS
NC_003888.3	RefSeq	gene	3131350	3133899	.	+	.	ID=gene2892;Dbxref=GeneID:1098312;Name=SCE6.15;gbkey=Gene;gene=SCE6.15;gene_biotype=protein_coding;gene_synonym=SCE6.15;locus_tag=SCO2878
NC_003888.3	RefSeq	CDS	3131350	3133899	.	+	0	ID=cds2840;Parent=gene2892;Dbxref=Genbank:NP_627106.1,GeneID:1098312;Name=NP_627106.1;Note=SCE6.15%2C unknown%2C len: 849 aa. Contains degenerate repeats: 3xNR(N/H)TART and 3xAAGEAAAVA(Q/A). The predicted product of this CDS is also rich in the amino acid Ala and contains coiled-coils between residues 194..257 and 587..612.;gbkey=CDS;gene=SCE6.15;product=hypothetical protein;protein_id=NP_627106.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3131782	3131934	.	+	.	ID=id3604;Dbxref=GeneID:1098312;Note=degenerate repeat region with 3x AA(T/C)CGC(C/A)ACACGGCACGGACGGC(G/C)GCAGGCGA(G?A) GC(G/A)GCAGCCGT(G/A)GCG(C/G)(A/C)(G/A) repeats;gbkey=repeat_region;gene=SCE6.15
NC_003888.3	RefSeq	gene	3134618	3136273	.	+	.	ID=gene2893;Dbxref=GeneID:1098313;Name=cvnA12;gbkey=Gene;gene=cvnA12;gene_biotype=protein_coding;gene_synonym=cvnA12,SCE6.16;locus_tag=SCO2879
NC_003888.3	RefSeq	CDS	3134618	3136273	.	+	0	ID=cds2841;Parent=gene2893;Dbxref=Genbank:NP_627107.1,GeneID:1098313;Name=NP_627107.1;Note=SCE6.16%2C cvnA12%2C possible membrane protein%2C len: 551 aa. Similar to many Streptomyces coelicolor proteins e.g. TR:CAB59483 (EMBL:AL132648) integral membrane protein%2C SCI41.13C (541 aa)%2C fasta scores opt: 449 z-score: 340.7 E(): 1.5e-11 27.5%25 identity in 564 aa overlap. Contains a possible hydrophobic membrane spanning region and coiled-coils between residues 120..140;gbkey=CDS;gene=cvnA12;product=hypothetical protein;protein_id=NP_627107.1;transl_table=11
NC_003888.3	RefSeq	gene	3136276	3136698	.	+	.	ID=gene2894;Dbxref=GeneID:1098314;Name=cvnB12;gbkey=Gene;gene=cvnB12;gene_biotype=protein_coding;gene_synonym=cvnB12,SCE6.17;locus_tag=SCO2880
NC_003888.3	RefSeq	CDS	3136276	3136698	.	+	0	ID=cds2842;Parent=gene2894;Dbxref=Genbank:NP_627108.1,GeneID:1098314;Name=NP_627108.1;Note=SCE6.17%2C cvnB12%2C unknown%2C len: 140 aa. Similar to many proteins of undefined function from Streptomyces coelicolor e.g. TR:Q9X835 (EMBL:AL049727) SC9B1.15C (139 aa)%2C fasta scores opt: 222 z-score: 297.5 E(): 3.9e-09 34.3%25 identity in 134 aa overlap and TR:CAB61281 (EMBL:AL132991) SCF55.11C (152 aa)%2C fasta scores opt: 221 z-score: 295.6 E(): 4.9e-09 32.6%25 identity in 138 aa overlap. Contains a Pfam match to entry PF01860 DUF42%2C Protein of unknown function.;gbkey=CDS;gene=cvnB12;product=hypothetical protein;protein_id=NP_627108.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3136324	3136650	.	+	.	ID=id3605;Dbxref=GeneID:1098314;Note=Pfam match to entry PF01860 DUF42%2C Protein of unknown function%2C score -0.20%2C E-value 0.0011;gbkey=misc_feature;gene=cvnB12
NC_003888.3	RefSeq	gene	3136695	3137048	.	+	.	ID=gene2895;Dbxref=GeneID:1098315;Name=cvnC12;gbkey=Gene;gene=cvnC12;gene_biotype=protein_coding;gene_synonym=cvnC12,SCE6.18;locus_tag=SCO2881
NC_003888.3	RefSeq	CDS	3136695	3137048	.	+	0	ID=cds2843;Parent=gene2895;Dbxref=Genbank:NP_627109.1,GeneID:1098315;Name=NP_627109.1;Note=SCE6.18%2C cvnC12%2C unknown%2C len: 117 aa. Similar to many proteins of undefined function from Streptomyces coelicolor e.g. TR:CAB71243 (EMBL:AL138598) SC1A2.05 (126 aa)%2C fasta scores opt: 194 z-score: 251.3 E(): 1.4e-06 38.7%25 identity in 119 aa overlap and TR:Q9X834 (EMBL:AL049727) SC9B1.14C (119 aa)%2C fasta scores opt: 192 z-score: 249.3 E(): 1.9e-06 37.9%25 identity in 124 aa overlap.;gbkey=CDS;gene=cvnC12;product=hypothetical protein;protein_id=NP_627109.1;transl_table=11
NC_003888.3	RefSeq	gene	3137116	3137664	.	+	.	ID=gene2896;Dbxref=GeneID:1098316;Name=cvnD12;gbkey=Gene;gene=cvnD12;gene_biotype=protein_coding;gene_synonym=cvnD12,SCE6.19;locus_tag=SCO2882
NC_003888.3	RefSeq	CDS	3137116	3137664	.	+	0	ID=cds2844;Parent=gene2896;Dbxref=Genbank:NP_627110.1,GeneID:1098316;Name=NP_627110.1;Note=SCE6.19%2C cvnD12%2C possible ATP/GTP-binding protein%2C len: 182 aa. Highly similar to many other ATP/GTP-binding proteins from Streptomyces coelicolor including: TR:CAB59480 (EMBL:AL132648) SCI41.10C (176 aa)%2C fasta scores opt: 618 z-score: 748.9 E(): 0 58.4%25 identity in 166 aa overlap and TR:Q9X833 (EMBL:AL049727) SC9B1.13C (181 aa)%2C fasta scores opt: 588 z-score: 712.9 E(): 2.8e-32 53.4%25 identity in 176 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=cvnD12;product=ATP/GTP-binding protein;protein_id=NP_627110.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3137125	3137148	.	+	.	ID=id3606;Dbxref=GeneID:1098316;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD12
NC_003888.3	RefSeq	gene	3137661	3138893	.	+	.	ID=gene2897;Dbxref=GeneID:1098317;Name=SCE6.20;gbkey=Gene;gene=SCE6.20;gene_biotype=protein_coding;gene_synonym=SCE6.20;locus_tag=SCO2883
NC_003888.3	RefSeq	CDS	3137661	3138893	.	+	0	ID=cds2845;Parent=gene2897;Dbxref=Genbank:NP_627111.1,GeneID:1098317;Name=NP_627111.1;Note=SCE6.20%2C possible cytochrome P450%2C len: 410 aa. Highly similar to many other cytochrome P450 proteins from Streptomyces including: S. coelicolor TR:CAB61278 (EMBL:AL132991) SCF55.08C (420 aa)%2C fasta scores opt: 710 z-score: 807.4 E():0 33.1%25 identity in 411 aa overlap and S. violaceus (S. venezuelae) TR:O87605 (EMBL:AF087022) cytochrome P450 monooxygenase%2C PikC (416 aa)%2C fasta scores opt: 464 z-score: 529.1 E(): 4.8e-22 30.2%25 identity in 411 aa overlap. Also similar to the adjoining CDS SCE6.21 (408 aa)%2C fasta scores opt: 257 z-score: 252.4 E(): 1.5e-08 26.5%25 identity in 407 aa overlap. Contains a Prosite hit to PS00086 Cytochrome P450 cysteine heme-iron ligand signature.;gbkey=CDS;gene=SCE6.20;product=cytochrome P450;protein_id=NP_627111.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3138690	3138719	.	+	.	ID=id3607;Dbxref=GeneID:1098317;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SCE6.20
NC_003888.3	RefSeq	ribosome_entry_site	3138892	3138897	.	+	.	ID=id3608;gbkey=RBS
NC_003888.3	RefSeq	gene	3138905	3140131	.	+	.	ID=gene2898;Dbxref=GeneID:1098318;Name=SCE6.21;gbkey=Gene;gene=SCE6.21;gene_biotype=protein_coding;gene_synonym=SCE6.21;locus_tag=SCO2884
NC_003888.3	RefSeq	CDS	3138905	3140131	.	+	0	ID=cds2846;Parent=gene2898;Dbxref=Genbank:NP_627112.1,GeneID:1098318;Name=NP_627112.1;Note=SCE6.21%2C possible cytochrome P450%2C len: 408 aa. Highly similar to many other cytochrome P450 proteins including: Saccharopolyspora erythraea (Streptomyces erythraeus) SW:CPXJ_SACER(EMBL:X60379) 6-deoxyerythronolide B hydroxylase (404 aa)%2C fasta scores opt: 777 z-score: 888.8 E():0 37.8%25 identity in 410 aa overlap and Streptomyces fradiae TR:Q9XCC6(EMBL:AF145049) (433 aa)%2C fasta scores opt: 1253 z-score: 1430.3 E():0 50.9%25 identity in 409 aa overlap. Also similar to the adjoining CDS SCE6.20 (410 aa)%2C fasta scores opt: 257 z-score: 252.4 E(): 1.5e-08 26.5%25 identity in 407 aa overlap. Contains a PS00086 Cytochrome P450 cysteine heme-iron ligand signature and a Pfam match to entry PF00067 p450%2C Cytochrome P450.;gbkey=CDS;gene=SCE6.21;product=cytochrome P450;protein_id=NP_627112.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3139157	3140125	.	+	.	ID=id3609;Dbxref=GeneID:1098318;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 208.30%2C E-value 1.2e-58;gbkey=misc_feature;gene=SCE6.21
NC_003888.3	RefSeq	sequence_feature	3139943	3139972	.	+	.	ID=id3610;Dbxref=GeneID:1098318;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SCE6.21
NC_003888.3	RefSeq	gene	3140184	3140657	.	-	.	ID=gene2899;Dbxref=GeneID:1098319;Name=SCE6.22c;gbkey=Gene;gene=SCE6.22c;gene_biotype=protein_coding;gene_synonym=SCE6.22c;locus_tag=SCO2885
NC_003888.3	RefSeq	CDS	3140184	3140657	.	-	0	ID=cds2847;Parent=gene2899;Dbxref=Genbank:NP_627113.1,GeneID:1098319;Name=NP_627113.1;Note=SCE6.22c%2C unknown%2C len: 157 aa. Highly similar to another hypothetical protein from Streptomyces coelicolor TR:CAB66282 (EMBL:AL136519) SCC57A.14 (161 aa)%2C fasta scores opt: 611 z-score: 780.6 E():0 58.3%25 identity in 156 aa overlap;gbkey=CDS;gene=SCE6.22c;product=hypothetical protein;protein_id=NP_627113.1;transl_table=11
NC_003888.3	RefSeq	gene	3140760	3141644	.	-	.	ID=gene2900;Dbxref=GeneID:1098320;Name=SCE6.23c;gbkey=Gene;gene=SCE6.23c;gene_biotype=protein_coding;gene_synonym=SCE6.23c;locus_tag=SCO2886
NC_003888.3	RefSeq	CDS	3140760	3141644	.	-	0	ID=cds2848;Parent=gene2900;Dbxref=Genbank:NP_627114.1,GeneID:1098320;Name=NP_627114.1;Note=SCE6.23c%2C possible hydrolase%2C len: 294 aa. Similar to several including: Mycobacterium sp. TR:Q9ZER0 (EMBL:AJ012627) haloalkane dehalogenase%2C DhaAF (307 aa)%2C fasta scores opt: 347 z-score: 425.8 E(): 2.7e-16 27.4%25 identity in 292 aa overlap and Deinococcus radiodurans TR:AAF12090 (EMBL:AE002084) epoxide hydrolase-related protein (278 aa)%2C fasta scores opt: 402 z-score: 493.2 E(): 4.8e-2032.4%25 identity in 284 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SCE6.23c;product=hydrolase;protein_id=NP_627114.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3140784	3141464	.	-	.	ID=id3611;Dbxref=GeneID:1098320;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 100.70%2C E-value 2.9e-26;gbkey=misc_feature;gene=SCE6.23c
NC_003888.3	RefSeq	ribosome_entry_site	3141794	3141799	.	+	.	ID=id3612;gbkey=RBS
NC_003888.3	RefSeq	gene	3141805	3142107	.	+	.	ID=gene2901;Dbxref=GeneID:1098321;Name=SCE6.24;gbkey=Gene;gene=SCE6.24;gene_biotype=protein_coding;gene_synonym=SCE6.24;locus_tag=SCO2887
NC_003888.3	RefSeq	CDS	3141805	3142107	.	+	0	ID=cds2849;Parent=gene2901;Dbxref=Genbank:NP_627115.1,GeneID:1098321;Name=NP_627115.1;Note=SCE6.24%2C possible membrane protein%2C len: 100. The predicted product of this CDS is rich in the amino acid Ala and contains several possible hydrophobic membrane spanning domains.;gbkey=CDS;gene=SCE6.24;product=hypothetical protein;protein_id=NP_627115.1;transl_table=11
NC_003888.3	RefSeq	gene	3142123	3142482	.	-	.	ID=gene2902;Dbxref=GeneID:1098322;Name=SCE6.25c;gbkey=Gene;gene=SCE6.25c;gene_biotype=protein_coding;gene_synonym=SCE6.25c;locus_tag=SCO2888
NC_003888.3	RefSeq	CDS	3142123	3142482	.	-	0	ID=cds2850;Parent=gene2902;Dbxref=Genbank:NP_627116.1,GeneID:1098322;Name=NP_627116.1;Note=SCE6.25c%2C unknown%2C len: 119 aa. similar to TR:CAC46858 (EMBL:AL591790) hypothetical protein from Rhizobium meliloti (Sinorhizobium meliloti) (120 aa) fasta scores%3B opt: 360%2C Z-score: 449.2%2C E(): 2.2e-17%2C 48.305%25 identity (49.565%25 ungapped) in 118 aa overlap. Weakly similar in parts to Streptomyces coelicolor TR:O86701(EMBL:AL031515) lyase%2C SC5C7.04 (138 aa)%2C fasta scores opt: 141 z-score: 193.4 E(): 0.0024 33.3%25 identity in 111 aa overlap.;gbkey=CDS;gene=SCE6.25c;product=hypothetical protein;protein_id=NP_627116.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3142488	3142492	.	-	.	ID=id3613;gbkey=RBS
NC_003888.3	RefSeq	gene	3142528	3144042	.	-	.	ID=gene2903;Dbxref=GeneID:1098323;Name=SCE6.26c;gbkey=Gene;gene=SCE6.26c;gene_biotype=protein_coding;gene_synonym=SCE6.26c;locus_tag=SCO2889
NC_003888.3	RefSeq	CDS	3142528	3144042	.	-	0	ID=cds2851;Parent=gene2903;Dbxref=Genbank:NP_627117.1,GeneID:1098323;Name=NP_627117.1;Note=SCE6.26c%2C possible sugar transport protein%2C len: 504 aa. Similar to several Eukaryotic and Prokaryotic transport proteins including: Schizosaccharomyces pombe (Fission yeast) SW:ITR2_SCHPO(EMBL:Z95334) myo-inositol transporter 2 (557 aa)%2C fasta scores opt: 422 z-score: 488.9 E(): 8.4e-20 27.6%25 identity in 467 aa overlap and Bacillus subtilis SW:YYAJ_BACSU(EMBL:D26185) hypothetical metabolite transport protein (451 aa)%2C fasta scores opt: 420 z-score: 487.9 E(): 9.6e-20 27.7%25 identity in 451 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCE6.26c;product=sugar transport protein;protein_id=NP_627117.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3142585	3143943	.	-	.	ID=id3614;Dbxref=GeneID:1098323;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 114.60%2C E-value 1.8e-30;gbkey=misc_feature;gene=SCE6.26c
NC_003888.3	RefSeq	ribosome_entry_site	3144049	3144053	.	-	.	ID=id3615;gbkey=RBS
NC_003888.3	RefSeq	gene	3144126	3145338	.	-	.	ID=gene2904;Dbxref=GeneID:1098324;Name=SCE6.27c;gbkey=Gene;gene=SCE6.27c;gene_biotype=pseudogene;gene_synonym=SCE6.27c,SCE6.28c;locus_tag=SCO2890;pseudo=true
NC_003888.3	RefSeq	sequence_feature	3144126	3145338	.	-	.	ID=id3616;Dbxref=PSEUDO:CAD55457.1,GeneID:1098324;Note=hypothetical protein (pseudogene).%3BSCE6.27c%2C possible hypothetical protein%2C pseudogene%2C len: 284 aa. This CDS represents the C-terminus of SCE6.28c and is similar to the C-terminal region of Mycobacterium tuberculosis TR:O53758(EMBL:AL021933) membrane protein (456 aa).~SCE6.28c%2C possible hypothetical protein%2C pseudogene%2C len: 119 aa. This CDS represents the N-terminus of SCE6.27c and is highly similar to the N-terminus of Mycobacterium tuberculosis TR:O53758(EMBL:AL021933)  membrane protein (456 aa). Appears to be a shift in reading frame after residue 119. Contains a possible N-terminal signal sequence.;gbkey=misc_feature;gene=SCE6.27c
NC_003888.3	RefSeq	ribosome_entry_site	3145710	3145714	.	+	.	ID=id3617;gbkey=RBS
NC_003888.3	RefSeq	gene	3145726	3147090	.	+	.	ID=gene2905;Dbxref=GeneID:1098325;Name=SCE6.29;gbkey=Gene;gene=SCE6.29;gene_biotype=protein_coding;gene_synonym=SCE6.29;locus_tag=SCO2892
NC_003888.3	RefSeq	CDS	3145726	3147090	.	+	0	ID=cds2852;Parent=gene2905;Dbxref=Genbank:NP_627118.1,GeneID:1098325;Name=NP_627118.1;Note=SCE6.29%2C possible hypothetical protein%2C len: 454 aa. Similar to another hypothetical protein from Streptomyces coelicolor: TR:CAB56661(EMBL:AL121596) SCF51A.09C (442 aa)%2C fasta scores opt: 614 z-score: 649.3 E(): 9.8e-29 31.3%25 identity in 454 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE6.29;product=hypothetical protein;protein_id=NP_627118.1;transl_table=11
NC_003888.3	RefSeq	gene	3147118	3147951	.	-	.	ID=gene2906;Dbxref=GeneID:1098326;Name=SCE6.30c;gbkey=Gene;gene=SCE6.30c;gene_biotype=protein_coding;gene_synonym=SCE6.30c;locus_tag=SCO2893
NC_003888.3	RefSeq	CDS	3147118	3147951	.	-	0	ID=cds2853;Parent=gene2906;Dbxref=Genbank:NP_627119.1,GeneID:1098326;Name=NP_627119.1;Note=SCE6.30c%2C unknown%2C len: 277 aa. Similar to several proteins of undefined function e.g. Mycobacterium leprae TR:Q9Z5H1(EMBL:AL035500) hypothetical 22.1 kd protein (200 aa)%2C fasta scores opt: 413 z-score: 443.6 E(): 2.8e-17 41.5%25 identity in 205 aa overlap. Contains a possible coiled-coil between residues 206..226.;gbkey=CDS;gene=SCE6.30c;product=hypothetical protein;protein_id=NP_627119.1;transl_table=11
NC_003888.3	RefSeq	gene	3147985	3149049	.	-	.	ID=gene2907;Dbxref=GeneID:1098327;Name=SCE6.31c;gbkey=Gene;gene=SCE6.31c;gene_biotype=protein_coding;gene_synonym=SCE6.31c;locus_tag=SCO2894
NC_003888.3	RefSeq	CDS	3147985	3149049	.	-	0	ID=cds2854;Parent=gene2907;Dbxref=Genbank:NP_627120.1,GeneID:1098327;Name=NP_627120.1;Note=SCE6.31c%2C possible ABC-transport protein%2C ATP-binding component%2C len: 354 aa. Similar to many other proposed transport proteins e.g. Synechocystis sp. (strain PCC 6803) TR:P73329(EMBL:D90905) ABC transporter (326 aa)%2C fasta scores opt: 831 z-score: 906.9 E(): 0 45.3%25 identity in 296 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00005 ABC_tran%2C ABC transporter.;gbkey=CDS;gene=SCE6.31c;product=ABC transporter ATP-binding protein;protein_id=NP_627120.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3148273	3148824	.	-	.	ID=id3618;Dbxref=GeneID:1098327;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 146.90%2C E-value 3.5e-40;gbkey=misc_feature;gene=SCE6.31c
NC_003888.3	RefSeq	sequence_feature	3148780	3148803	.	-	.	ID=id3619;Dbxref=GeneID:1098327;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE6.31c
NC_003888.3	RefSeq	gene	3149058	3149945	.	-	.	ID=gene2908;Dbxref=GeneID:1098328;Name=SCE6.32c;gbkey=Gene;gene=SCE6.32c;gene_biotype=protein_coding;gene_synonym=SCE6.32c;locus_tag=SCO2895
NC_003888.3	RefSeq	CDS	3149058	3149945	.	-	0	ID=cds2855;Parent=gene2908;Dbxref=Genbank:NP_627121.1,GeneID:1098328;Name=NP_627121.1;Note=SCE6.32c possible integral membrane transport protein%2C len: 295 aa. Similar to Deinococcus radiodurans TR:AAF09789(EMBL:AE001882) conserved hypothetical protein (277 aa)%2C fasta scores. Also weakly similar to the adjoining CDS SCE6.33c%2C fasta scores opt: 174 z-score: 186.6 E(): 6.9e-05 29.4%25 identity in 269 aa overlap. Contains a Prosite hit to PS00216 Sugar transport proteins signature 1 and multiple possible membrane spanning hydrophobic domains. Also contains an N-terminal 5xEAA repeat sequence.;gbkey=CDS;gene=SCE6.32c;product=integral membrane transport protein;protein_id=NP_627121.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3149580	3149627	.	-	.	ID=id3620;Dbxref=GeneID:1098328;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCE6.32c
NC_003888.3	RefSeq	repeat_region	3149886	3149930	.	-	.	ID=id3621;Dbxref=GeneID:1098328;Note=repeat region containing 3x GAGGCGGC(C/G) repeats;gbkey=repeat_region;gene=SCE6.32c
NC_003888.3	RefSeq	gene	3149938	3150744	.	-	.	ID=gene2909;Dbxref=GeneID:1098329;Name=SCE6.33c;gbkey=Gene;gene=SCE6.33c;gene_biotype=protein_coding;gene_synonym=SCE6.33c;locus_tag=SCO2896
NC_003888.3	RefSeq	CDS	3149938	3150744	.	-	0	ID=cds2856;Parent=gene2909;Dbxref=Genbank:NP_627122.1,GeneID:1098329;Name=NP_627122.1;Note=SCE6.33c%2C possible integral membrane protein%2C len: 268 aa. Similar to a protein of undefined function from Deinococcus radiodurans TR:AAF09788(EMBL:AE001882) conserved hypothetical protein (275 aa)%2C fasta scores: opt: 521 z-score: 606.4 E(): 2.4e-26 38.6%25 identity in 272 aa overlap. Also weakly similar to the adjoining CDS SCE6.32c%2C fasta scores: opt: 174 z-score: 186.6 E(): 6.9e-05 29.4%25 identity in 269 aa overlap. Contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCE6.33c;product=hypothetical protein;protein_id=NP_627122.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3150748	3150752	.	-	.	ID=id3622;gbkey=RBS
NC_003888.3	RefSeq	gene	3151125	3153395	.	+	.	ID=gene2910;Dbxref=GeneID:1098330;Name=SCE6.34;gbkey=Gene;gene=SCE6.34;gene_biotype=protein_coding;gene_synonym=SCE6.34;locus_tag=SCO2897
NC_003888.3	RefSeq	CDS	3151125	3153395	.	+	0	ID=cds2857;Parent=gene2910;Dbxref=Genbank:NP_627123.1,GeneID:1098330;Name=NP_627123.1;Note=SCE6.34%2C probable  penicillin-binding protein%2C len: 756 aa. Similar to many including: Bacillus subtilis SW:PBPD_BACSU(EMBL:U11882) penicillin-binding protein 4 precursor (624 aa)%2C fasta scores opt: 550 z-score: 456.8 E(): 5.5e-18 28.1%25 identity in 572 aa overlap and Helicobacter pylori TR:O25319(EMBL:AE000573) penicillin-binding protein 1A (659 aa)%2C fasta scores opt: 750 z-score: 619.0 E(): 5.1e-27 31.9%25 identity in 605 aa overlap. Contains Pfam matches to entries PF00912 Transglycosyl%2C Transglycosylase and PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain as well a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE6.34;product=penicillin-binding protein;protein_id=NP_627123.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3151236	3151736	.	+	.	ID=id3623;Dbxref=GeneID:1098330;Note=Pfam match to entry PF00912 Transglycosyl%2C Transglycosylase%2C score 212.00%2C E-value 8.9e-60;gbkey=misc_feature;gene=SCE6.34
NC_003888.3	RefSeq	sequence_feature	3151971	3152948	.	+	.	ID=id3624;Dbxref=GeneID:1098330;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 75.10%2C E-value 1.4e-18;gbkey=misc_feature;gene=SCE6.34
NC_003888.3	RefSeq	gene	3153389	3153709	.	-	.	ID=gene2911;Dbxref=GeneID:1098331;Name=SCE6.35c;gbkey=Gene;gene=SCE6.35c;gene_biotype=protein_coding;gene_synonym=SCE6.35c,sugE;locus_tag=SCO2898
NC_003888.3	RefSeq	CDS	3153389	3153709	.	-	0	ID=cds2858;Parent=gene2911;Dbxref=Genbank:NP_627124.1,GeneID:1098331;Name=NP_627124.1;Note=SCE6.35c%2C sugE%2C molecular chaperone%2C len: 106 aa. Highly similar to several proposed molecular chaperones e.g. Escherichia coli SW:SUGE_ECOLI(EMBL:X69949) SugE (105 aa)%2C fasta scores opt: 394 z-score: 454.4 E(): 7e-18 51.0%25 identity in 104 aa overlap. Contains a Pfam match to entry PF00893 DUF7%2C Integral membrane protein and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCE6.35c;product=molecular chaperone;protein_id=NP_627124.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3153431	3153709	.	-	.	ID=id3625;Dbxref=GeneID:1098331;Note=Pfam match to entry PF00893 DUF7%2C Integral membrane protein%2C score 120.80%2C E-value 2.5e-32;gbkey=misc_feature;gene=SCE6.35c
NC_003888.3	RefSeq	gene	3153870	3154226	.	-	.	ID=gene2912;Dbxref=GeneID:1098332;Name=SCE6.36c;gbkey=Gene;gene=SCE6.36c;gene_biotype=protein_coding;gene_synonym=SCE6.36c;locus_tag=SCO2899
NC_003888.3	RefSeq	CDS	3153870	3154226	.	-	0	ID=cds2859;Parent=gene2912;Dbxref=Genbank:NP_627125.1,GeneID:1098332;Name=NP_627125.1;Note=SCE6.36c%2C possible GroES-family molecular chaperone%2C len: 110 aa. Similar to many members of the GroES chaperonin family including: Rhizobium meliloti SW:CH13_RHIME(EMBL:M94191) 10 KD chaperonin C (GroES-C) (101 aa)%2C fasta scores opt: 172 z-score: 231.3 E(): 1.9e-05 33.7%25 identity in 101 aa overlap. Contains 2xPfam matches to entry PF00166 cpn10%2C Chaperonins 10 Kd subunit.;gbkey=CDS;gene=SCE6.36c;product=GroES family molecular chaperone;protein_id=NP_627125.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3153915	3153980	.	-	.	ID=id3626;Dbxref=GeneID:1098332;Note=Pfam match to entry PF00166 cpn10%2C Chaperonins 10 Kd subunit%2C score 2.00%2C E-value 41;gbkey=misc_feature;gene=SCE6.36c
NC_003888.3	RefSeq	sequence_feature	3154041	3154184	.	-	.	ID=id3627;Dbxref=GeneID:1098332;Note=Pfam match to entry PF00166 cpn10%2C Chaperonins 10 Kd subunit%2C score 25.30%2C E-value 1.2e-05;gbkey=misc_feature;gene=SCE6.36c
NC_003888.3	RefSeq	gene	3154250	3154582	.	-	.	ID=gene2913;Dbxref=GeneID:1098333;Name=SCE6.37c;gbkey=Gene;gene=SCE6.37c;gene_biotype=protein_coding;gene_synonym=SCE6.37c;locus_tag=SCO2900
NC_003888.3	RefSeq	CDS	3154250	3154582	.	-	0	ID=cds2860;Parent=gene2913;Dbxref=Genbank:NP_627126.1,GeneID:1098333;Name=NP_627126.1;Note=SCE6.37c%2C possible membrane protein%2C len: 110 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SCE6.37c;product=hypothetical protein;protein_id=NP_627126.1;transl_table=11
NC_003888.3	RefSeq	gene	3154677	3155144	.	+	.	ID=gene2914;Dbxref=GeneID:1098334;Name=SCE19A.01;gbkey=Gene;gene=SCE19A.01;gene_biotype=protein_coding;gene_synonym=SCE19A.01,SCE6.38;locus_tag=SCO2901
NC_003888.3	RefSeq	CDS	3154677	3155144	.	+	0	ID=cds2861;Parent=gene2914;Dbxref=Genbank:NP_627127.1,GeneID:1098334;Name=NP_627127.1;Note=SCE19A.01%2C hypothetical protein%2C partial CDS%2C len: >31 aa%3B unknown function%2C similar to members of the alkyl hydroperoxide reductase C/thiol-specific antioxidant family e.g. TR:O53226 (EMBL:AL021185)%2C bcp%2C Mycobacterium tuberculosis bacterioferritin comigratory protein (157 aa)%2C fasta scores%3B opt: 124 z-score: 238.1 E(): 6.2e-06%2C 63.3%25 identity in 30 aa overlap~SCE6.38%2C unknown%2C len: 155 aa. Highly similar to many bacterioferritin co migratory proteins which have no known function e.g. Escherichia coli SW:BCP_ECOLI(EMBL:M63654) bacterioferritin co migratory protein%2C Bcp (156 aa)%2C fasta scores opt: 516 z-score: 621.8 E(): 3.3e-27 51.1%25 identity in 141 aa overlap. Overlaps and extends into CDS SCE19A.01 on the adjoining cosmid. Contains a Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family.;gbkey=CDS;gene=SCE19A.01;product=hypothetical protein;protein_id=NP_627127.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3154695	3155129	.	+	.	ID=id3628;Dbxref=GeneID:1098334;Note=Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family%2C score 129.00%2C E-value 8.4e-35;gbkey=misc_feature;gene=SCE19A.01
NC_003888.3	RefSeq	gene	3155187	3155273	.	+	.	ID=gene2915;Dbxref=GeneID:3240023;Name=SCOt23;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt23
NC_003888.3	RefSeq	tRNA	3155187	3155273	.	+	.	ID=rna29;Parent=gene2915;Dbxref=GeneID:3240023;Note=tRNA Leu anticodon TAG%2C Cove score 69.78;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	exon	3155187	3155273	.	+	.	ID=id3629;Parent=rna29;Dbxref=GeneID:3240023;Note=tRNA Leu anticodon TAG%2C Cove score 69.78;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	gene	3155290	3155892	.	-	.	ID=gene2916;Dbxref=GeneID:1098335;Name=SCE19A.02c;gbkey=Gene;gene=SCE19A.02c;gene_biotype=protein_coding;gene_synonym=SCE19A.02c;locus_tag=SCO2902
NC_003888.3	RefSeq	CDS	3155290	3155892	.	-	0	ID=cds2862;Parent=gene2916;Dbxref=Genbank:NP_627128.1,GeneID:1098335;Name=NP_627128.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;gene=SCE19A.02c;product=deoxyribonucleotide triphosphate pyrophosphatase;protein_id=NP_627128.1;transl_table=11
NC_003888.3	RefSeq	gene	3155939	3156343	.	-	.	ID=gene2917;Dbxref=GeneID:1098336;Name=SCE19A.03c;gbkey=Gene;gene=SCE19A.03c;gene_biotype=protein_coding;gene_synonym=SCE19A.03c;locus_tag=SCO2903
NC_003888.3	RefSeq	CDS	3155939	3156343	.	-	0	ID=cds2863;Parent=gene2917;Dbxref=Genbank:NP_627129.1,GeneID:1098336;Name=NP_627129.1;Note=SCE19A.03c%2C possible hypothetical protein%2C len: 134 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains probable N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site%2C so may be a lipoprotein;gbkey=CDS;gene=SCE19A.03c;product=hypothetical protein;protein_id=NP_627129.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3156248	3156280	.	-	.	ID=id3630;Dbxref=GeneID:1098336;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE19A.03c
NC_003888.3	RefSeq	gene	3156501	3157238	.	-	.	ID=gene2918;Dbxref=GeneID:1098337;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;gene_synonym=SCE19A.04c;locus_tag=SCO2904
NC_003888.3	RefSeq	CDS	3156501	3157238	.	-	0	ID=cds2864;Parent=gene2918;Dbxref=Genbank:NP_627130.1,GeneID:1098337;Name=NP_627130.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=NP_627130.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3156558	3157232	.	-	.	ID=id3631;Dbxref=GeneID:1098337;Note=Pfam match to entry PF01138 RNase_PH%2C 3' exoribonuclease family%2C score 266.70%2C E-value 3.1e-76;gbkey=misc_feature;gene=rph
NC_003888.3	RefSeq	sequence_feature	3156852	3156890	.	-	.	ID=id3632;Dbxref=GeneID:1098337;Note=PS01277 Ribonuclease PH signature;gbkey=misc_feature;gene=rph
NC_003888.3	RefSeq	gene	3157315	3157548	.	-	.	ID=gene2919;Dbxref=GeneID:1098338;Name=SCE19A.05c;gbkey=Gene;gene=SCE19A.05c;gene_biotype=protein_coding;gene_synonym=SCE19A.05c;locus_tag=SCO2905
NC_003888.3	RefSeq	CDS	3157315	3157548	.	-	0	ID=cds2865;Parent=gene2919;Dbxref=Genbank:NP_627131.1,GeneID:1098338;Name=NP_627131.1;Note=SCE19A.05c%2C hypothetical protein%2C len: 77 aa%3B unknown function%2C similar to parts of many sugar permeases e.g. TR:P96159 (EMBL:U65013)%2C MalX%2C Vibrio furnissii PTS (phosphoenolpyruvate-dependent sugar phosphotransferase system) permease for glucose (523 aa)%2C fasta scores%3B opt: 217 z-score: 287.9 E(): 1.1e-08%2C 48.1%25 identity in 77 aa overlap. Contains Pfam match to entry PF00367 PTS_EIIB%2C phosphotransferase system%2C EIIB;gbkey=CDS;gene=SCE19A.05c;product=hypothetical protein;protein_id=NP_627131.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3157432	3157536	.	-	.	ID=id3633;Dbxref=GeneID:1098338;Note=Pfam match to entry PF00367 PTS_EIIB%2C phosphotransferase system%2C EIIB%2C score 43.00%2C E-value 8.1e-11;gbkey=misc_feature;gene=SCE19A.05c
NC_003888.3	RefSeq	gene	3157707	3159002	.	+	.	ID=gene2920;Dbxref=GeneID:1098339;Name=SCE19A.06;gbkey=Gene;gene=SCE19A.06;gene_biotype=protein_coding;gene_synonym=SCE19A.06;locus_tag=SCO2906
NC_003888.3	RefSeq	CDS	3157707	3159002	.	+	0	ID=cds2866;Parent=gene2920;Dbxref=Genbank:NP_627132.1,GeneID:1098339;Name=NP_627132.1;Note=SCE19A.06%2C possible PTS transmembrane component%2C len: 431 aa%3B similar to many PTS (phosphoenolpyruvate-dependent sugar phosphotransferase system) transmembrane and sugar-binding components e.g. TR:Q57071 (EMBL:X93360)%2C GlcA%2C PtsG%2C Staphylococcus carnosus PTS system%2C glucose-specific IIABC component (675 aa)%2C fasta scores%3B opt: 1120 z-score: 1260.6 E(): 0%2C 43.4%25 identity in 431 aa overlap. Similar to the adjacent CDS SCE19A.07%2C possible PTS transmembrane component (416 aa) (4.1%25 identity in 429 aa overlap).The homologous PTS family proteins have a C-terminal extension not present in this CDS. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCE19A.06;product=PTS transmembrane protein;protein_id=NP_627132.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3157758	3158044	.	+	.	ID=id3634;Dbxref=GeneID:1098339;Note=repeat 1%3B degenerate 287 bp direct repeat;gbkey=repeat_region;gene=SCE19A.06
NC_003888.3	RefSeq	repeat_region	3158151	3159000	.	+	.	ID=id3635;Dbxref=GeneID:1098339;Note=repeat 2%3B degenerate 850 bp direct repeat;gbkey=repeat_region;gene=SCE19A.06
NC_003888.3	RefSeq	gene	3159229	3160479	.	+	.	ID=gene2921;Dbxref=GeneID:1098340;Name=SCE19A.07;gbkey=Gene;gene=SCE19A.07;gene_biotype=protein_coding;gene_synonym=SCE19A.07;locus_tag=SCO2907
NC_003888.3	RefSeq	CDS	3159229	3160479	.	+	0	ID=cds2867;Parent=gene2921;Dbxref=Genbank:NP_627133.1,GeneID:1098340;Name=NP_627133.1;Note=SCE19A.07%2C possible PTS transmembrane component%2C len: 416 aa%3B similar to many PTS (phosphoenolpyruvate-dependent sugar phosphotransferase system) transmembrane and sugar-binding components e.g. SW:PTGB_ECOLI (EMBL:J02618)%2C ptsG%2C glcA%2C Escherichia coli PTS system%2C glucose-specific IIBC component (477 aa)%2C fasta scores%3B opt: 1112 z-score: 1244.4 E(): 0%2C 44.7%25 identity in 396 aa overlap. Similar to the adjacent CDS SCE19A.06%2C possible PTS transmembrane component (431 aa) (64.1%25 identity in 429 aa overlap). The homologous PTS family proteins have a C-terminal extension not present in this CDS. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCE19A.07;product=PTS transmembrane protein;protein_id=NP_627133.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3159283	3159560	.	+	.	ID=id3636;Dbxref=GeneID:1098340;Note=repeat 1%3B degenerate 287 bp direct repeat;gbkey=repeat_region;gene=SCE19A.07
NC_003888.3	RefSeq	repeat_region	3159628	3160477	.	+	.	ID=id3637;Dbxref=GeneID:1098340;Note=repeat 2%3B degenerate 850 bp direct repeat;gbkey=repeat_region;gene=SCE19A.07
NC_003888.3	RefSeq	gene	3160574	3161326	.	-	.	ID=gene2922;Dbxref=GeneID:1098341;Name=SCE19A.08c;gbkey=Gene;gene=SCE19A.08c;gene_biotype=protein_coding;gene_synonym=SCE19A.08c;locus_tag=SCO2908
NC_003888.3	RefSeq	CDS	3160574	3161326	.	-	0	ID=cds2868;Parent=gene2922;Dbxref=Genbank:NP_627134.1,GeneID:1098341;Name=NP_627134.1;Note=SCE19A.08c%2C conserved hypothetical protein%2C len: 250 aa%3B unknown function%2C similar to hypothetical proteins from Mycobacterium leprae%2C Mycobacterium tuberculosis and bacillus subtilis e.g. SW:Y03O_MYCLE (EMBL:U00014) Mycobacterium leprae hypothetical protein (284 aa)%2C fasta scores%3B opt: 642 z-score: 777.3 E(): 0%2C 43.0%25 identity in 256 aa overlap. Similar to SC66T3.08c (EMBL:AL079348) S.coelicolor hypothetical protein (270 aa) (36.4%25 identity in 272 aa overlap);gbkey=CDS;gene=SCE19A.08c;product=hypothetical protein;protein_id=NP_627134.1;transl_table=11
NC_003888.3	RefSeq	gene	3161531	3161698	.	+	.	ID=gene2923;Dbxref=GeneID:1098342;Name=SCE19A.09;gbkey=Gene;gene=SCE19A.09;gene_biotype=protein_coding;gene_synonym=SCE19A.09;locus_tag=SCO2909
NC_003888.3	RefSeq	CDS	3161531	3161698	.	+	0	ID=cds2869;Parent=gene2923;Dbxref=Genbank:NP_627135.1,GeneID:1098342;Name=NP_627135.1;Note=SCE19A.09%2C membrane protein%2C len: 55 aa%3B unknown function%2C improbable CDS suggested by GC frameplot. C-terminus is rich in Arg and Pro. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE19A.09;product=hypothetical protein;protein_id=NP_627135.1;transl_table=11
NC_003888.3	RefSeq	gene	3161747	3162697	.	-	.	ID=gene2924;Dbxref=GeneID:1098343;Name=SCE19A.10c;gbkey=Gene;gene=SCE19A.10c;gene_biotype=protein_coding;gene_synonym=SCE19A.10c;locus_tag=SCO2910
NC_003888.3	RefSeq	CDS	3161747	3162697	.	-	0	ID=cds2870;Parent=gene2924;Dbxref=Genbank:NP_627136.1,GeneID:1098343;Name=NP_627136.1;Note=SCE19A.10c%2C probable cysteine synthase%2C len: 316 aa%3B similar to many e.g. SW:CYSM_ECOLI (EMBL:M32101)%2C CysM%2C Escherichia coli cysteine synthase B (303 aa)%2C fasta scores%3B opt: 776 z-score: 884.3 E(): 0%2C 43.7%25 identity in 293 aa overlap. Highly similar to SW:CYSK_MYCTU (EMBL:Z73902) Mycobacterium tuberculosis probable cysteine synthase (323 aa) (72.4%25 identity in 322 aa overlap). Weak similarity to the N-terminus of SCF43A.11c (EMBL:AL096837) S.coelicolor probable threonine dehydratase (325 aa) (27.2%25 identity in 195 aa overlap). Contains Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzymes and PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site;gbkey=CDS;gene=SCE19A.10c;product=cysteine synthase;protein_id=NP_627136.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3161834	3162682	.	-	.	ID=id3638;Dbxref=GeneID:1098343;Note=Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzymes%2C score 332.80%2C E-value 3.8e-96;gbkey=misc_feature;gene=SCE19A.10c
NC_003888.3	RefSeq	sequence_feature	3162548	3162604	.	-	.	ID=id3639;Dbxref=GeneID:1098343;Note=PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site;gbkey=misc_feature;gene=SCE19A.10c
NC_003888.3	RefSeq	gene	3162704	3162982	.	-	.	ID=gene2925;Dbxref=GeneID:1098344;Name=SCE19A.11c;gbkey=Gene;gene=SCE19A.11c;gene_biotype=protein_coding;gene_synonym=SCE19A.11c;locus_tag=SCO2911
NC_003888.3	RefSeq	CDS	3162704	3162982	.	-	0	ID=cds2871;Parent=gene2925;Dbxref=Genbank:NP_627137.1,GeneID:1098344;Name=NP_627137.1;Note=SCE19A.11c%2C conserved hypothetical protein%2C len: 92 aa%3B unknown function%2C similar to hypothetical proteins from other organisms e.g. SW:Y03K_MYCTU (EMBL:Z73902) Mycobacterium tuberculosis hypothetical protein (93 aa)%2C fasta scores%3B opt: 341 z-score: 451.3 E(): 8.3e-18%2C 57.0%25 identity in 93 aa overlap;gbkey=CDS;gene=SCE19A.11c;product=hypothetical protein;protein_id=NP_627137.1;transl_table=11
NC_003888.3	RefSeq	gene	3163082	3163225	.	-	.	ID=gene2926;Dbxref=GeneID:1098345;Name=SCE19A.12c;gbkey=Gene;gene=SCE19A.12c;gene_biotype=protein_coding;gene_synonym=SCE19A.12c;locus_tag=SCO2912
NC_003888.3	RefSeq	CDS	3163082	3163225	.	-	0	ID=cds2872;Parent=gene2926;Dbxref=Genbank:NP_627138.1,GeneID:1098345;Name=NP_627138.1;Note=SCE19A.12c%2C hypothetical protein%2C len: 47 aa%3B unknown function%2C possible CDS suggested by GC frameplot;gbkey=CDS;gene=SCE19A.12c;product=hypothetical protein;protein_id=NP_627138.1;transl_table=11
NC_003888.3	RefSeq	gene	3163257	3163679	.	-	.	ID=gene2927;Dbxref=GeneID:1098346;Name=SCE19A.13c;gbkey=Gene;gene=SCE19A.13c;gene_biotype=protein_coding;gene_synonym=SCE19A.13c;locus_tag=SCO2913
NC_003888.3	RefSeq	CDS	3163257	3163679	.	-	0	ID=cds2873;Parent=gene2927;Dbxref=Genbank:NP_627139.1,GeneID:1098346;Name=NP_627139.1;Note=SCE19A.13c%2C conserved hypothetical protein%2C len: 140 aa%3B unknown function%2C similar to hypothetical proteins from other organisms e.g. SW:Y03J_MYCTU (EMBL:Z73902) Mycobacterium tuberculosis hypothetical protein (146 aa)%2C fasta scores%3B opt: 579 z-score: 694.1 E(): 2.5e-31%2C 65.0%25 identity in 140 aa overlap and TR:Q54330 (EMBL:M29166) Streptomyces kasugaensis CDS from Mec+ region (115 aa) (69.8%25 identity in 116 aa overlap);gbkey=CDS;gene=SCE19A.13c;product=hypothetical protein;protein_id=NP_627139.1;transl_table=11
NC_003888.3	RefSeq	gene	3163847	3165274	.	-	.	ID=gene2928;Dbxref=GeneID:1098347;Name=SCE19A.14c;gbkey=Gene;gene=SCE19A.14c;gene_biotype=protein_coding;gene_synonym=SCE19A.14c;locus_tag=SCO2914
NC_003888.3	RefSeq	CDS	3163847	3165274	.	-	0	ID=cds2874;Parent=gene2928;Dbxref=Genbank:NP_627140.1,GeneID:1098347;Name=NP_627140.1;Note=SCE19A.14c%2C probable amino acid permease%2C len: 475 aa%3B similar to many amino acid permeases e.g. SW:ANSP_SALTY (EMBL:U04851)%2C ansP%2C Salmonella typhimurium L-asparagine permease (497 aa)%2C fasta scores%3B opt: 1360 z-score: 1551.0 E(): 0%2C 44.4%25 identity in 455 aa overlap. Similar to SC5F2A.17 (EMBL:AL049587) probable amino acid permease (489 aa) (44.9%25 identity in 465 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and PS00218 Amino acid permeases signature;gbkey=CDS;gene=SCE19A.14c;product=amino acid permease;protein_id=NP_627140.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3163904	3165229	.	-	.	ID=id3640;Dbxref=GeneID:1098347;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 584.00%2C E-value 9.1e-172;gbkey=misc_feature;gene=SCE19A.14c
NC_003888.3	RefSeq	sequence_feature	3165038	3165130	.	-	.	ID=id3641;Dbxref=GeneID:1098347;Note=PS00218 Amino acid permeases signature;gbkey=misc_feature;gene=SCE19A.14c
NC_003888.3	RefSeq	gene	3165626	3166234	.	-	.	ID=gene2929;Dbxref=GeneID:1098348;Name=SCE19A.15c;gbkey=Gene;gene=SCE19A.15c;gene_biotype=protein_coding;gene_synonym=SCE19A.15c;locus_tag=SCO2915
NC_003888.3	RefSeq	CDS	3165626	3166234	.	-	0	ID=cds2875;Parent=gene2929;Dbxref=Genbank:NP_627141.1,GeneID:1098348;Name=NP_627141.1;Note=SCE19A.15c%2C hypothetical protein%2C len: 202 aa%3B similar to SW:Y03H_MYCLE (EMBL:U00014) Mycobacterium leprae hypothetical protein (222 aa)%2C fasta scores%3B opt: 192 z-score: 222.4 E(): 4.7e-05%2C 34.6%25 identity in 188 aa overlap and SW:Y03H_MYCTU (EMBL:Z73902) Mycobacterium tuberculosis hypothetical protein (218 aa) (32.8%25 identity in 186 aa overlap);gbkey=CDS;gene=SCE19A.15c;product=hypothetical protein;protein_id=NP_627141.1;transl_table=11
NC_003888.3	RefSeq	gene	3166288	3166605	.	-	.	ID=gene2930;Dbxref=GeneID:1098349;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;gene_synonym=SCE19A.16c;locus_tag=SCO2916
NC_003888.3	RefSeq	CDS	3166288	3166605	.	-	0	ID=cds2876;Parent=gene2930;Dbxref=Genbank:NP_627142.1,GeneID:1098349;Name=NP_627142.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adaptor protein ClpS;protein_id=NP_627142.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3166784	3166788	.	+	.	ID=id3642;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3166796	3168142	.	+	.	ID=gene2931;Dbxref=GeneID:1098350;Name=SCE19A.17;gbkey=Gene;gene=SCE19A.17;gene_biotype=protein_coding;gene_synonym=SCE19A.17;locus_tag=SCO2917
NC_003888.3	RefSeq	CDS	3166796	3168142	.	+	0	ID=cds2877;Parent=gene2931;Dbxref=Genbank:NP_627143.1,GeneID:1098350;Name=NP_627143.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;gene=SCE19A.17;product=nicotinate phosphoribosyltransferase;protein_id=NP_627143.1;transl_table=11
NC_003888.3	RefSeq	gene	3168248	3168835	.	+	.	ID=gene2932;Dbxref=GeneID:1098351;Name=SCE19A.18;gbkey=Gene;gene=SCE19A.18;gene_biotype=protein_coding;gene_synonym=SCE19A.18;locus_tag=SCO2918
NC_003888.3	RefSeq	CDS	3168248	3168835	.	+	0	ID=cds2878;Parent=gene2932;Dbxref=Genbank:NP_627144.1,GeneID:1098351;Name=NP_627144.1;Note=SCE19A.18%2C probable nicotinamidase%2C len: 195 aa%3B highly similar to nicotinamidases e.g. TR:Q50575 (EMBL:U59967)%2C PncA%2C Mycobacterium tuberculosis pyrazinamidase/nicotinamidase (186 aa)%2C fasta scores%3B opt: 801 z-score: 921.3 E(): 0%2C 65.6%25 identity in 186 aa overlap. Contains Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family;gbkey=CDS;gene=SCE19A.18;product=nicotinamidase;protein_id=NP_627144.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3168257	3168778	.	+	.	ID=id3643;Dbxref=GeneID:1098351;Note=Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family%2C score 71.30%2C E-value 2e-17;gbkey=misc_feature;gene=SCE19A.18
NC_003888.3	RefSeq	gene	3168848	3169192	.	-	.	ID=gene2933;Dbxref=GeneID:1098352;Name=SCE19A.19c;gbkey=Gene;gene=SCE19A.19c;gene_biotype=protein_coding;gene_synonym=SCE19A.19c;locus_tag=SCO2919
NC_003888.3	RefSeq	CDS	3168848	3169192	.	-	0	ID=cds2879;Parent=gene2933;Dbxref=Genbank:NP_627145.1,GeneID:1098352;Name=NP_627145.1;Note=SCE19A.19c%2C hypothetical protein%2C len: 114 aa%3B unknown function%2C probable CDS suggested by probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCE19A.19c;product=hypothetical protein;protein_id=NP_627145.1;transl_table=11
NC_003888.3	RefSeq	gene	3169339	3171684	.	-	.	ID=gene2934;Dbxref=GeneID:1098353;Name=SCE19A.20c;gbkey=Gene;gene=SCE19A.20c;gene_biotype=protein_coding;gene_synonym=SCE19A.20c;locus_tag=SCO2920
NC_003888.3	RefSeq	CDS	3169339	3171684	.	-	0	ID=cds2880;Parent=gene2934;Dbxref=Genbank:NP_627146.1,GeneID:1098353;Name=NP_627146.1;Note=SCE19A.20c%2C probable  protease%2C len: 781 aa%3B similar to SW:INA_BACTL (EMBL:X55436)%2C Ina%2C Bacillus thuringiensis inhibitor A (a protease) (687 aa)%2C fasta scores%3B opt: 924 z-score: 991.3 E(): 0%2C 32.9%25 identity in 747 aa overlap and TR:O07351 (EMBL:Y00557)%2C PrtV%2C Vibrio cholerae protease precursor (919 aa) (33.2%25 identity in 794 aa overlap). Contains probable N-terminal signal sequence and PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=CDS;gene=SCE19A.20c;product=protease;protein_id=NP_627146.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3170629	3170658	.	-	.	ID=id3644;Dbxref=GeneID:1098353;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SCE19A.20c
NC_003888.3	RefSeq	ribosome_entry_site	3171691	3171696	.	-	.	ID=id3645;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3172118	3172417	.	+	.	ID=gene2935;Dbxref=GeneID:1098354;Name=SCE19A.21;gbkey=Gene;gene=SCE19A.21;gene_biotype=protein_coding;gene_synonym=SCE19A.21;locus_tag=SCO2921
NC_003888.3	RefSeq	CDS	3172118	3172417	.	+	0	ID=cds2881;Parent=gene2935;Dbxref=Genbank:NP_627147.1,GeneID:1098354;Name=NP_627147.1;Note=SCE19A.21%2C membrane protein%2C len: 99 aa%3B unknown function%2C probable CDS suggested by probable CDS suggested by GC frameplot and positional base preference. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE19A.21;product=hypothetical protein;protein_id=NP_627147.1;transl_table=11
NC_003888.3	RefSeq	gene	3172431	3172877	.	-	.	ID=gene2936;Dbxref=GeneID:1098355;Name=SCE19A.22c;gbkey=Gene;gene=SCE19A.22c;gene_biotype=protein_coding;gene_synonym=SCE19A.22c;locus_tag=SCO2922
NC_003888.3	RefSeq	CDS	3172431	3172877	.	-	0	ID=cds2882;Parent=gene2936;Dbxref=Genbank:NP_627148.1,GeneID:1098355;Name=NP_627148.1;Note=SCE19A.22c%2C possible membrane protein%2C len: 148 aa%3B unknown function%2C weakly similar to TR:O34424 (EMBL:AF008220) Bacillus subtilis hypothetical protein (164 aa)%2C fasta scores%3B opt: 137 z-score: 190.5 E(): 0.0028%2C 30.4%25 identity in 135 aa overlap. Weak similarity to adjacent CDS SCE19.23c%2C hypothetical protein (224 aa) (29.1%25 identity in 158 aa overlap). Contains a hydrophobic%2C possible membrane-spanning region;gbkey=CDS;gene=SCE19A.22c;product=hypothetical protein;protein_id=NP_627148.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3172923	3173027	.	-	.	ID=id3646;Note=repeat 3%3B 3x degenerate CCCCCGCCCCCCGGCGGMGGMGGYCCCTACGGMGGK repeats;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3173314	3173988	.	-	.	ID=gene2937;Dbxref=GeneID:1098356;Name=SCE19.23c;gbkey=Gene;gene=SCE19.23c;gene_biotype=protein_coding;gene_synonym=SCE19.23c;locus_tag=SCO2923
NC_003888.3	RefSeq	CDS	3173314	3173988	.	-	0	ID=cds2883;Parent=gene2937;Dbxref=Genbank:NP_627149.1,GeneID:1098356;Name=NP_627149.1;Note=SCE19.23c%2C membrane protein%2C len: 224 aa%3B unknown function%2C probable CDS suggested by probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. The N-terminus is Pro-rich. Weak similarity to adjacent CDS SCE19.22c%2C hypothetical protein (148 aa) (29.1%25 identity in 158 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE19.23c;product=hypothetical protein;protein_id=NP_627149.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3174039	3174143	.	-	.	ID=id3647;Note=repeat 4%3B many degenerate AAGGCC repeats;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3175140	3175568	.	+	.	ID=gene2938;Dbxref=GeneID:1098357;Name=SCE19A.24;gbkey=Gene;gene=SCE19A.24;gene_biotype=protein_coding;gene_synonym=SCE19A.24;locus_tag=SCO2924
NC_003888.3	RefSeq	CDS	3175140	3175568	.	+	0	ID=cds2884;Parent=gene2938;Dbxref=Genbank:NP_627150.1,GeneID:1098357;Name=NP_627150.1;Note=SCE19A.24%2C possible regulator%2C len: 142 aa%3B similar to TR:P95753 (EMBL:D50051)%2C SsgA%2C Streptomyces griseus gene involved in regulation of sporulation and cell division (136 aa)%2C fasta scores%3B opt: 291 z-score: 368.2 E(): 3.6e-13%2C 37.3%25 identity in 126 aa overlap and to SC5F2A.05C (EMBL:AL049587) S. coelicolor regulator (138 aa) (38.5%25 identity in 135 aa overlap);gbkey=CDS;gene=SCE19A.24;product=regulator;protein_id=NP_627150.1;transl_table=11
NC_003888.3	RefSeq	gene	3175582	3177048	.	-	.	ID=gene2939;Dbxref=GeneID:1098358;Name=SCE19A.25c;gbkey=Gene;gene=SCE19A.25c;gene_biotype=protein_coding;gene_synonym=SCE19A.25c;locus_tag=SCO2925
NC_003888.3	RefSeq	CDS	3175582	3177048	.	-	0	ID=cds2885;Parent=gene2939;Dbxref=Genbank:NP_627151.1,GeneID:1098358;Name=NP_627151.1;Note=SCE19A.25c%2C probable oxidoreductase subunit%2C len: 488 aa%3B similar to many e.g. SW:GLCD_ECOLI (EMBL:L43490)%2C GlcD%2C Escherichia coli glycolate oxidase subunit (499 aa)%2C fasta scores%3B opt: 1033 z-score: 1172.9 E(): 0%2C 38.9%25 identity in 460 aa overlap. Also similar to SW:DLD1_YEAST (EMBL:X66052)%2C dld%2C Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome] precursor (587 aa) (29.4%25 identity in 435 aa overlap). The N-terminus differs from its homologues and an alternative start codon is present at codon 3;gbkey=CDS;gene=SCE19A.25c;product=oxidoreductase subunit;protein_id=NP_627151.1;transl_table=11
NC_003888.3	RefSeq	gene	3177221	3178576	.	+	.	ID=gene2940;Dbxref=GeneID:1098359;Name=SCE19A.26;gbkey=Gene;gene=SCE19A.26;gene_biotype=protein_coding;gene_synonym=SCE19A.26;locus_tag=SCO2926
NC_003888.3	RefSeq	CDS	3177221	3178576	.	+	0	ID=cds2886;Parent=gene2940;Dbxref=Genbank:NP_627152.1,GeneID:1098359;Name=NP_627152.1;Note=SCE19A.26%2C hypothetical protein%2C len: 451 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Alternaive start codons are present at codons 11 and 17. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE19A.26;product=hypothetical protein;protein_id=NP_627152.1;transl_table=11
NC_003888.3	RefSeq	gene	3178620	3179765	.	-	.	ID=gene2941;Dbxref=GeneID:1098360;Name=SCE19A.27c;gbkey=Gene;gene=SCE19A.27c;gene_biotype=protein_coding;gene_synonym=SCE19A.27c;locus_tag=SCO2927
NC_003888.3	RefSeq	CDS	3178620	3179765	.	-	0	ID=cds2887;Parent=gene2941;Dbxref=Genbank:NP_627153.1,GeneID:1098360;Name=NP_627153.1;Note=SCE19A.27c%2C probable 4-hydroxyphenylpyruvate dioxygenase%2C len: 381 aa%3B highly similar to many e.g. SW:HPPD_STRAW (EMBL:U11864) Streptomyces avermitilis 4-hydroxyphenylpyruvate dioxygenase (380 aa)%2C fasta scores%3B opt: 2347 z-score: 2634.5 E(): 0%2C 91.9%25 identity in 381 aa overlap. Similar to TR:Q9Z4X7 (EMBL:AL035640) S. coelicolor probable 4-hydroxyphenylpyruvic acid dioxygenase (325 aa) (36.4%25 identity in 330 aa overlap);gbkey=CDS;gene=SCE19A.27c;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=NP_627153.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3179878	3179882	.	+	.	ID=id3648;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3179891	3180382	.	+	.	ID=gene2942;Dbxref=GeneID:1098361;Name=SCE19A.28;gbkey=Gene;gene=SCE19A.28;gene_biotype=protein_coding;gene_synonym=SCE19A.28;locus_tag=SCO2928
NC_003888.3	RefSeq	CDS	3179891	3180382	.	+	0	ID=cds2888;Parent=gene2942;Dbxref=Genbank:NP_627154.1,GeneID:1098361;Name=NP_627154.1;Note=SCE19A.28%2C probable asnC-family transcriptional regulator%2C len: 163 aa%3B similar to SW:ASNC_ECOLI (EMBL:K00826)%2C AsnC%2C Escherichia coli transcriptional activator of asparagine synthetase (152 aa)%2C fasta scores%3B opt: 236 z-score: 296.2 E(): 3.7e-09%2C 31.3%25 identity in 147 aa overlap and to asnC-family regulators. Similar to SC6G9.10 (EMBL:AL079356) S.coelicolor probable AsnC family transcriptional regulator (164 aa) (48.7%25 identity in 156 aa overlap). Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family;gbkey=CDS;gene=SCE19A.28;product=transcription regulator AsnC;protein_id=NP_627154.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3179978	3180268	.	+	.	ID=id3649;Dbxref=GeneID:1098361;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 58.40%2C E-value 1.6e-13;gbkey=misc_feature;gene=SCE19A.28
NC_003888.3	RefSeq	gene	3180504	3181553	.	-	.	ID=gene2943;Dbxref=GeneID:1098362;Name=SCE19A.29c;gbkey=Gene;gene=SCE19A.29c;gene_biotype=protein_coding;gene_synonym=SCE19A.29c;locus_tag=SCO2929
NC_003888.3	RefSeq	CDS	3180504	3181553	.	-	0	ID=cds2889;Parent=gene2943;Dbxref=Genbank:NP_627155.1,GeneID:1098362;Name=NP_627155.1;Note=SCE19A.29c%2C possible transposase%2C len: 349 aa%3B weak similarity to TR:Q48345 (EMBL:M24855) ORF within Anabaena sp. insertion sequence IS891 (402 aa)%2C fasta scores%3B opt: 271 z-score: 327.3 E(): 6.8e-11%2C 25.6%25 identity in 309 aa overlap. Weakly similar to SCH35.10 (EMBL:AL078610) S.coelicolor probable transposase (407 aa) (26.3%25 identity in 342 aa overlap);gbkey=CDS;gene=SCE19A.29c;product=transposase;protein_id=NP_627155.1;transl_table=11
NC_003888.3	RefSeq	gene	3181757	3182404	.	+	.	ID=gene2944;Dbxref=GeneID:1098363;Name=SCE19A.30;gbkey=Gene;gene=SCE19A.30;gene_biotype=protein_coding;gene_synonym=SCE19A.30;locus_tag=SCO2930
NC_003888.3	RefSeq	CDS	3181757	3182404	.	+	0	ID=cds2890;Parent=gene2944;Dbxref=Genbank:NP_627156.1,GeneID:1098363;Name=NP_627156.1;Note=SCE19A.30%2C probable permease membrane component%2C len: 215 aa%3B similar to components transporters involved in osmoregulation e.g. SW:PROW_BACSU (EMBL:U38418)%2C proW%2C Bacillus subtilis glycine/betaine/L-proline transport system permease (217 aa)%2C fasta scores%3B opt: 413 z-score: 474.7 E(): 4.2e-19%2C 35.1%25 identity in 211 aa overlap. Similar to SCE19A.32%2C probable permease inner membrane component (290 aa) (33.8%25 identity in 207 aa overlap) and to SC9B1.11 (EMBL:AL049727) S.coelicolor probable ABC transport permease (221 aa) (31.3%25 identity in 195 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. May be part of a multicomponent transporter which includes SCE19A.30%2C SCE19A.31%2C SCE19A.32 and SCE19A.33. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component;gbkey=CDS;gene=SCE19A.30;product=permease membrane protein;protein_id=NP_627156.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3182060	3182272	.	+	.	ID=id3650;Dbxref=GeneID:1098363;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 37.20%2C E-value 3.7e-07;gbkey=misc_feature;gene=SCE19A.30
NC_003888.3	RefSeq	gene	3182412	3183686	.	+	.	ID=gene2945;Dbxref=GeneID:1098364;Name=SCE19A.31;gbkey=Gene;gene=SCE19A.31;gene_biotype=protein_coding;gene_synonym=SCE19A.31;locus_tag=SCO2931
NC_003888.3	RefSeq	CDS	3182412	3183686	.	+	0	ID=cds2891;Parent=gene2945;Dbxref=Genbank:NP_627157.1,GeneID:1098364;Name=NP_627157.1;Note=SCE19A.31%2C probable ABC transporter ATP-binding protein%2C len: 424 aa%3B similar to many%2C including components of transporters involved in osmoregulation e.g. SW:PROV_BACSU (EMBL:U38418)%2C proV%2C Bacillus subtilis glycine/betaine/L-proline transport ATP-binding protein (404 aa)%2C fasta scores%3B opt: 997 z-score: 1092.8 E(): 0%2C 45.7%25 identity in 359 aa overlap. Similar to SC9B1.09 (EMBL:AL049727) S.coelicolor ABC transporter ATP-binding subunit (386 aa) (49.0%25 identity in 365 aa overlap). Contains an approx. 20 aa N-terminal extension absent similar proteins. May be part of a multicomponent transporter which includes SCE19A.30%2C SCE19A.31%2C SCE19A.32 and SCE19A.33. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCE19A.31;product=ABC transporter ATP-binding protein;protein_id=NP_627157.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3182556	3183113	.	+	.	ID=id3651;Dbxref=GeneID:1098364;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 239.40%2C E-value 5e-68;gbkey=misc_feature;gene=SCE19A.31
NC_003888.3	RefSeq	sequence_feature	3182577	3182600	.	+	.	ID=id3652;Dbxref=GeneID:1098364;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE19A.31
NC_003888.3	RefSeq	sequence_feature	3182883	3182927	.	+	.	ID=id3653;Dbxref=GeneID:1098364;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE19A.31
NC_003888.3	RefSeq	gene	3183683	3184555	.	+	.	ID=gene2946;Dbxref=GeneID:1098365;Name=SCE19A.32;gbkey=Gene;gene=SCE19A.32;gene_biotype=protein_coding;gene_synonym=SCE19A.32;locus_tag=SCO2932
NC_003888.3	RefSeq	CDS	3183683	3184555	.	+	0	ID=cds2892;Parent=gene2946;Dbxref=Genbank:NP_627158.1,GeneID:1098365;Name=NP_627158.1;Note=SCE19A.32%2C probable permease membrane component%2C len: 290 aa%3B similar to many%2C including components of transporters involved in osmoregulation e.g. SW:PROW_BACSU (EMBL:U38418)%2C proW%2C Bacillus subtilis glycine/betaine/L-proline transport system permease (217 aa)%2C fasta scores%3B opt: 429 z-score: 461.7 E(): 2.2e-18%2C 37.7%25 identity in 220 aa overlap. Similar to SCE19A.30%2C probable permease inner membrane component (215 aa) (33.5%25 identity in 209 aa overlap) and SC9B1.11 (EMBL:AL049727) probable ABC transport permease (221 aa) (37.6%25 identity in 186 aa overlap). Contains an approx. 50 aa N-terminal extension absent from similar proteins and hydrophobic%2C possible membrane-spanning regions. May be part of a multicomponent transporter which includes SCE19A.30%2C SCE19A.31%2C SCE19A.32 and SCE19A.33. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SCE19A.32;product=permease membrane protein;protein_id=NP_627158.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3184217	3184429	.	+	.	ID=id3654;Dbxref=GeneID:1098365;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 51.60%2C E-value 1.7e-11;gbkey=misc_feature;gene=SCE19A.32
NC_003888.3	RefSeq	sequence_feature	3184220	3184306	.	+	.	ID=id3655;Dbxref=GeneID:1098365;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCE19A.32
NC_003888.3	RefSeq	gene	3184552	3185520	.	+	.	ID=gene2947;Dbxref=GeneID:1098366;Name=SCE19A.33;gbkey=Gene;gene=SCE19A.33;gene_biotype=protein_coding;gene_synonym=SCE19A.33;locus_tag=SCO2933
NC_003888.3	RefSeq	CDS	3184552	3185520	.	+	0	ID=cds2893;Parent=gene2947;Dbxref=Genbank:NP_627159.1,GeneID:1098366;Name=NP_627159.1;Note=SCE19A.33%2C probable permease binding-protein component%2C len: 322 aa%3B similar to SW:PROX_BACSU (EMBL:U38418)%2C proX%2C Bacillus subtilis glycine/betaine-binding protein precursor (313 aa)%2C fasta scores%3B opt: 300 z-score: 341.4 E(): 1.1e-11%2C 27.5%25 identity in 320 aa overlap and to similar permease components. Similar to SC9B1.12 (EMBL:AL049727) S.coelicolor probable  substrate-binding protein (320 aa) (30.4%25 identity in 329 aa overlap). Contains a probable N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site. May be part of a multicomponent transporter which includes SCE19A.30%2C SCE19A.31%2C SCE19A.32 and SCE19A.33;gbkey=CDS;gene=SCE19A.33;product=permease binding-protein component;protein_id=NP_627159.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3184579	3184611	.	+	.	ID=id3656;Dbxref=GeneID:1098366;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE19A.33
NC_003888.3	RefSeq	gene	3185545	3186324	.	-	.	ID=gene2948;Dbxref=GeneID:1098367;Name=SCE19A.34c;gbkey=Gene;gene=SCE19A.34c;gene_biotype=protein_coding;gene_synonym=SCE19A.34c;locus_tag=SCO2934
NC_003888.3	RefSeq	CDS	3185545	3186324	.	-	0	ID=cds2894;Parent=gene2948;Dbxref=Genbank:NP_627160.1,GeneID:1098367;Name=NP_627160.1;Note=SCE19A.34c%2C possible hypothetical protein%2C len: 259 aa%3B unknown function%2C similar to parts of hypothetical proteins e.g. TR:O53340 (EMBL:AL021646) Mycobacterium tuberculosis hypothetical protein (340 aa)%2C fasta scores%3B opt: 396 z-score: 436.5 E(): 5.6e-17%2C 34.4%25 identity in 337 aa overlap%2C but with significant indels with respect to that sequence. Very weak similarity to the C-termini of ATP-dependent proteases e.g. SW:LON_CAUCR (EMBL:U56652)%2C lon%2C Caulobacter crescentus ATP-dependent protease (799 aa) (31.5%25 identity in 178 aa overlap). Contains a probable N-terminal signal sequence;gbkey=CDS;gene=SCE19A.34c;product=hypothetical protein;protein_id=NP_627160.1;transl_table=11
NC_003888.3	RefSeq	gene	3186380	3187042	.	-	.	ID=gene2949;Dbxref=GeneID:1098368;Name=SCE19A.35c;gbkey=Gene;gene=SCE19A.35c;gene_biotype=protein_coding;gene_synonym=SCE19A.35c;locus_tag=SCO2935
NC_003888.3	RefSeq	CDS	3186380	3187042	.	-	0	ID=cds2895;Parent=gene2949;Dbxref=Genbank:NP_627161.1,GeneID:1098368;Name=NP_627161.1;Note=SCE19A.35c%2C probable transcriptional regulator%2C len: 220 aa%3B similar to many e.g. SW:ICLR_ECOLI (EMBL:M31761)%2C IclR%2C Escherichia coli acetate operon repressor (274 aa)%2C fasta scores%3B opt: 206 z-score: 234.8 E(): 9.6e-06%2C 29.2%25 identity in 154 aa overlap. Similar to TR:O05148 (EMBL:U89712)%2C hppR%2C Rhodococcus globerulus regulator of 3-(3-hydroxyphenyl)propionic acid catabolic pathway (206 aa) (44.8%25 identity in 174 aa overlap). Contains probable helix-turn-helix motif at aa 27-48 (Score 1663%2C +4.85 SD);gbkey=CDS;gene=SCE19A.35c;product=transcriptional regulator;protein_id=NP_627161.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3187051	3187055	.	-	.	ID=id3657;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3187344	3189140	.	-	.	ID=gene2950;Dbxref=GeneID:1098369;Name=SCE19A.36c;gbkey=Gene;gene=SCE19A.36c;gene_biotype=protein_coding;gene_synonym=SCE19A.36c;locus_tag=SCO2936
NC_003888.3	RefSeq	CDS	3187344	3189140	.	-	0	ID=cds2896;Parent=gene2950;Dbxref=Genbank:NP_627162.1,GeneID:1098369;Name=NP_627162.1;Note=SCE19A.36c%2C conserved hypothetical protein%2C len: 598 aa%3B unknown function%2C similar to mycobacterial hypothetical proteins SW:Y065_MYCTU (EMBL:Z74697) Mycobacterium tuberculosis hypothetical protein (626 aa)%2C fasta scores%3B opt: 1921 z-score: 2072.6 E(): 0%2C 56.1%25 identity in 567 aa overlap and TR:O33011 (EMBL:Z97369) Mycobacterium leprae hypothetical protein (596 aa) (55.7%25 identity in 566 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCE19A.36c;product=hypothetical protein;protein_id=NP_627162.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3188964	3188987	.	-	.	ID=id3658;Dbxref=GeneID:1098369;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE19A.36c
NC_003888.3	RefSeq	gene	3189296	3190747	.	-	.	ID=gene2951;Dbxref=GeneID:1098370;Name=SCE19A.37c;gbkey=Gene;gene=SCE19A.37c;gene_biotype=protein_coding;gene_synonym=SCE19A.37c,SCE56.01c;locus_tag=SCO2937
NC_003888.3	RefSeq	CDS	3189296	3190747	.	-	0	ID=cds2897;Parent=gene2951;Dbxref=Genbank:NP_733586.1,GeneID:1098370;Name=NP_733586.1;Note=SCE56.01c%2C possible transport protein (partial)%2C len: >170 aa%3B similar to TR:AAF11647 (EMBL:AE002045) Deinococcus radiodurans conserved hypothetical protein DR2098%2C 462 aa%3B fasta scores: opt: 330 z-score: 380.0 E(): 9.3e-14%3B 37.4%25 identity in 155 aa overlap and to TR:O69070 (EMBL:AF079900) Streptomyces rimosus tetracycline efflux protein OtrB%2C 563 aa%3B fasta scores: opt: 271 z-score: 312.6 E(): 5.3e-10%3B 34.8%25 identity in 158 aa overlap. Contains possible hydrophobic membrane spanning regions~SCE19A.37c%2C possible transmembrane transport protein%2C partial CDS%2C len: >344 aa%3B weak similarity to transport proteins%2C many hypothetical e.g. TR:Q50392 (EMBL:U40487)%2C lfrA%2C Mycobacterium smegmatis proton antiporter efflux pump (504 aa)%2C fasta scores%3B opt: 220 z-score: 251.9 E(): 1.1e-06%2C 27.8%25 identity in 345 aa overlap. Weak similarity to part of others from S.coelicolor e.g. TR:Q9ZBJ1 (EMBL:AL035161) S.coelicolor probable efflux protein (815 aa) (27.2%25 identity in 345 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCE19A.37c;product=transmembrane transport protein;protein_id=NP_733586.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3191133	3191136	.	+	.	ID=id3659;gbkey=RBS
NC_003888.3	RefSeq	gene	3191138	3192148	.	+	.	ID=gene2952;Dbxref=GeneID:1098371;Name=SCE56.02;gbkey=Gene;gene=SCE56.02;gene_biotype=protein_coding;gene_synonym=SCE56.02;locus_tag=SCO2938
NC_003888.3	RefSeq	CDS	3191138	3192148	.	+	0	ID=cds2898;Parent=gene2952;Dbxref=Genbank:NP_627163.1,GeneID:1098371;Name=NP_627163.1;Note=SCE56.02%2C possible oxidoreductase%2C len: 336 aa%3B similar to TR:CAB61562 (EMBL:AL133171) Streptomyces coelicolor aldo/keto reductase (fragment) SCF81.28c%2C 307 aa%3B fasta scores: opt: 1370 z-score: 1572.6 E(): 0%3B 65.2%25 identity in 305 aa overlap and to SW:NORA_ASPFL (EMBL:U32377) Aspergillus flavus norsolorinic acid reductase (EC 1.1.1.-) NorA%2C 388 aa%3B fasta scores: opt: 572 z-score: 659.1 E(): 2.7e-29%3B 32.8%25 identity in 329 aa overlap;gbkey=CDS;gene=SCE56.02;product=oxidoreductase;protein_id=NP_627163.1;transl_table=11
NC_003888.3	RefSeq	gene	3192115	3192897	.	-	.	ID=gene2953;Dbxref=GeneID:1098372;Name=SCE56.03c;gbkey=Gene;gene=SCE56.03c;gene_biotype=protein_coding;gene_synonym=SCE56.03c;locus_tag=SCO2939
NC_003888.3	RefSeq	CDS	3192115	3192897	.	-	0	ID=cds2899;Parent=gene2953;Dbxref=Genbank:NP_627164.1,GeneID:1098372;Name=NP_627164.1;Note=SCE56.03c%2C unknown%2C len: 260 aa;gbkey=CDS;gene=SCE56.03c;product=hypothetical protein;protein_id=NP_627164.1;transl_table=11
NC_003888.3	RefSeq	gene	3192991	3195312	.	-	.	ID=gene2954;Dbxref=GeneID:1098373;Name=SCE56.04c;gbkey=Gene;gene=SCE56.04c;gene_biotype=protein_coding;gene_synonym=SCE56.04c;locus_tag=SCO2940
NC_003888.3	RefSeq	CDS	3192991	3195312	.	-	0	ID=cds2900;Parent=gene2954;Dbxref=Genbank:NP_627165.1,GeneID:1098373;Name=NP_627165.1;Note=SCE56.04c%2C possible oxidoreductase%2C len: 773 aa%3B similar to TR:Q9ZBN7 (EMBL:AL034492) Streptomyces coelicolor oxidoreductase SC6C5.08%2C 828 aa%3B fasta scores: opt: 1088 z-score: 1144.8 E(): 0%3B 42.2%25 identity in 782 aa overlap and to SW:XDH_DROPS (EMBL:M33977) Drosophila pseudoobscura xanthine dehydrogenase (EC 1.1.1.204) Xdh%2C 1342 aa%3B fasta scores: opt: 517 z-score: 540.4 E(): 1.1e-22%3B 27.4%25 identity in 762 aa overlap. Contains Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus;gbkey=CDS;gene=SCE56.04c;product=oxidoreductase;protein_id=NP_627165.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3193177	3195189	.	-	.	ID=id3660;Dbxref=GeneID:1098373;Note=Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score 279.60%2C E-value 3.9e-80;gbkey=misc_feature;gene=SCE56.04c
NC_003888.3	RefSeq	gene	3195309	3197630	.	-	.	ID=gene2955;Dbxref=GeneID:1098374;Name=SCE56.05c;gbkey=Gene;gene=SCE56.05c;gene_biotype=protein_coding;gene_synonym=SCE56.05c;locus_tag=SCO2941
NC_003888.3	RefSeq	CDS	3195309	3197630	.	-	0	ID=cds2901;Parent=gene2955;Dbxref=Genbank:NP_627166.1,GeneID:1098374;Name=NP_627166.1;Note=SCE56.05c%2C unknown%2C len: 773 aa%3B similar to C-terminal region of TR:Q9VYQ2 (EMBL:AE003488) Drosophila melanogaster CG2779 protein%2C 1612 aa%3B fasta scores: opt: 651 Z-score: 464.7 E(): 3e-18%3B 31.405%25 identity in 847 aa overlap. High content in proline%2C glycine and alanine. Contains Pfam matches to entries PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains and PF01799 fer2_2%2C [2Fe-2S] binding domain and match to Prosite entry PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=SCE56.05c;product=hypothetical protein;protein_id=NP_627166.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3195319	3195323	.	-	.	ID=id3661;Dbxref=GeneID:1098374;gbkey=RBS;gene=SCE56.05c
NC_003888.3	RefSeq	sequence_feature	3195540	3195764	.	-	.	ID=id3662;Dbxref=GeneID:1098374;Note=Pfam match to entry PF01799 fer2_2%2C [2Fe-2S] binding domain%2C score 115.20%2C E-value 1.2e-30;gbkey=misc_feature;gene=SCE56.05c
NC_003888.3	RefSeq	sequence_feature	3195786	3195974	.	-	.	ID=id3663;Dbxref=GeneID:1098374;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 13.10%2C E-value 0.073;gbkey=misc_feature;gene=SCE56.05c
NC_003888.3	RefSeq	sequence_feature	3195840	3195866	.	-	.	ID=id3664;Dbxref=GeneID:1098374;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SCE56.05c
NC_003888.3	RefSeq	sequence_feature	3196113	3196157	.	-	.	ID=id3665;Dbxref=GeneID:1098374;Note=intraprotein repeat 5x (PDX);gbkey=misc_feature;gene=SCE56.05c
NC_003888.3	RefSeq	gene	3197627	3198547	.	-	.	ID=gene2956;Dbxref=GeneID:1098375;Name=SCE56.06c;gbkey=Gene;gene=SCE56.06c;gene_biotype=protein_coding;gene_synonym=SCE56.06c,SCE59.01c;locus_tag=SCO2942
NC_003888.3	RefSeq	CDS	3197627	3198547	.	-	0	ID=cds2902;Parent=gene2956;Dbxref=Genbank:NP_733587.1,GeneID:1098375;Name=NP_733587.1;Note=SCE59.01c%2C possible oxidoreductase (partial)%2C len: >116 aa%3B similar to N-terminal region of TR:Q9ZBN9 (EMBL:AL034492) Streptomyces coelicolor oxidoreductase subunit SC6C5.06%2C 296 aa%3B fasta scores: opt: 223 z-score: 268.2 E(): 1.6e-07%3B 37.6%25 identity in 93 aa overlap and to TR:P95637 (EMBL:U65440) Rhodopseudomonas palustris 4-hydroxybenzoyl-CoA reductase HbaD subunit%2C 327 aa%3B fasta scores: opt: 193 z-score: 233.2 E(): 1.4e-05%3B 42.6%25 identity in 94 aa overlap~SCE56.06%2C possible oxidoreductase (partial)%2C len: >221 aa%3B similar of TR:Q9ZBN9 (EMBL:AL034492) Streptomyces coelicolor oxidoreductase subunit SC6C5.06%2C 296 aa%3B fasta scores: opt: 393 z-score: 443.2 E(): 2.8e-17%3B 34.7%25 identity in 222 aa overlap and to TR:P95637 (EMBL:U65440) Rhodopseudomonas palustris 4-hydroxybenzoyl-CoA reductase HbaD subunit%2C 327 aa%3B fasta scores: opt: 159 z-score: 184.7 E(): 0.0071%3B 32.1%25 identity in 184 aa overlap;gbkey=CDS;gene=SCE56.06c;product=oxidoreductase;protein_id=NP_733587.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3197639	3197643	.	-	.	ID=id3666;Dbxref=GeneID:1098375;gbkey=RBS;gene=SCE56.06c
NC_003888.3	RefSeq	gene	3198763	3200400	.	-	.	ID=gene2957;Dbxref=GeneID:1098376;Name=SCE59.02c;gbkey=Gene;gene=SCE59.02c;gene_biotype=protein_coding;gene_synonym=SCE59.02c;locus_tag=SCO2943
NC_003888.3	RefSeq	CDS	3198763	3200400	.	-	0	ID=cds2903;Parent=gene2957;Dbxref=Genbank:NP_627167.1,GeneID:1098376;Name=NP_627167.1;Note=SCE59.02c%2C probable sugar hydrolase%2C len: 545 aa%3B similar to TR:Q9ZH39 (EBML:AF072374) Pseudoalteromonas sp. S9 beta-N-acetylglucosaminidase ChiQ%2C 783 aa%3B fasta scores: opt: 1378 z-score: 1537.3 E(): 0%3B 41.6%25 identity in 512 aa overlap and to SW:HEX1_VIBFU (EMBL:U41417) Vibrio furnissii beta-hexosaminidase (EC 3.2.1.52) ExoI%2C 611 aa%3B fasta scores: opt: 1023 z-score: 1142.5 E(): 0%3B 40.0%25 identity in 487 aa overlap. Contains Pfam match to entry PF00728 Glyco_hydro_20%2C Glycosyl hydrolase family 20;gbkey=CDS;gene=SCE59.02c;product=sugar hydrolase;protein_id=NP_627167.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3199291	3199998	.	-	.	ID=id3667;Dbxref=GeneID:1098376;Note=Pfam match to entry PF00728 Glyco_hydro_20%2C Glycosyl hydrolase family 20%2C score 199.70%2C E-value 4.4e-56;gbkey=misc_feature;gene=SCE59.02c
NC_003888.3	RefSeq	gene	3200405	3201250	.	-	.	ID=gene2958;Dbxref=GeneID:1098377;Name=SCE59.03c;gbkey=Gene;gene=SCE59.03c;gene_biotype=protein_coding;gene_synonym=SCE59.03c;locus_tag=SCO2944
NC_003888.3	RefSeq	CDS	3200405	3201250	.	-	0	ID=cds2904;Parent=gene2958;Dbxref=Genbank:NP_627168.1,GeneID:1098377;Name=NP_627168.1;Note=SCE59.03c%2C possible sugar transporter membrane protein%2C len: 281 aa%3B similar to TR:CAB59590 (EMBL:AL132662) Streptomyces coelicolor sugar transporter inner membrane protein SCF11.13%2C 285 aa%3B fasta scores: opt: 730 z-score: 883.7 E(): 0%3B 42.1%25 identity in 278 aa overlap and to TR:AAF11008 (EMBL:AE001988) Deinococcus radiodurans ABC transporter%2C permease%2C MalFG family DR1436%2C 283 aa%3B fasta scores: opt: 645 z-score: 781.7 E(): 0%3B 38.2%25 identity in 272 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE59.03c;product=sugar transporter membrane protein;protein_id=NP_627168.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3200537	3200758	.	-	.	ID=id3668;Dbxref=GeneID:1098377;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.90%2C E-value 1.1e-13;gbkey=misc_feature;gene=SCE59.03c
NC_003888.3	RefSeq	sequence_feature	3200669	3200755	.	-	.	ID=id3669;Dbxref=GeneID:1098377;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign;gbkey=misc_feature;gene=SCE59.03c
NC_003888.3	RefSeq	gene	3201247	3202197	.	-	.	ID=gene2959;Dbxref=GeneID:1098378;Name=SCE59.04c;gbkey=Gene;gene=SCE59.04c;gene_biotype=protein_coding;gene_synonym=SCE59.04c;locus_tag=SCO2945
NC_003888.3	RefSeq	CDS	3201247	3202197	.	-	0	ID=cds2905;Parent=gene2959;Dbxref=Genbank:NP_627169.1,GeneID:1098378;Name=NP_627169.1;Note=SCE59.04c%2C possible sugar transporter membrane protein%2C len: 316 aa%3B similar to TR:CAB59589 (EMBL:AL132662) Streptomyces coelicolor sugar transporter inner membrane protein SCF11.12%2C 302 aa%3B fasta scores: and to TR:CAB55533 (EMBL:AL117322) Streptomyces coelicolor  binding-protein-dependent transport protein SCF1.13%2C 317 aa%3B fasta scores: opt: 527 z-score: 611.6 E(): 1.2e-26%3B 33.1%25 identity in 302 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE59.04c;product=sugar transporter membrane protein;protein_id=NP_627169.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3201253	3201256	.	-	.	ID=id3670;Dbxref=GeneID:1098378;gbkey=RBS;gene=SCE59.04c
NC_003888.3	RefSeq	sequence_feature	3201367	3201597	.	-	.	ID=id3671;Dbxref=GeneID:1098378;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 53.80%2C E-value 3.8e-12;gbkey=misc_feature;gene=SCE59.04c
NC_003888.3	RefSeq	gene	3202209	3203507	.	-	.	ID=gene2960;Dbxref=GeneID:1098379;Name=SCE59.05c;gbkey=Gene;gene=SCE59.05c;gene_biotype=protein_coding;gene_synonym=SCE59.05c;locus_tag=SCO2946
NC_003888.3	RefSeq	CDS	3202209	3203507	.	-	0	ID=cds2906;Parent=gene2960;Dbxref=Genbank:NP_627170.1,GeneID:1098379;Name=NP_627170.1;Note=SCE59.05c%2C possible sugar transporter sugar-binding protein%2C len: 432 aa%3B similar to TR:CAB59588 (EMBL:AL132662) Streptomyces coelicolor sugar transporter sugar-binding protein SCF11.11%2C 422 aa%3B fasta scores: opt: 538 z-score: 581.0 E(): 6e-25%3B 27.0%25 identity in 429 aa overlap and to SW:MALX_STRPN (EMBL:L08611) Streptococcus pneumoniae maltose/maltodextrin-binding protein precursor MalX%2C 423 aa%3B fasta scores: opt: 299 z-score: 325.5 E(): 1e-10%3B 26.0%25 identity in 431 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE59.05c;product=sugar transporter sugar-binding protein;protein_id=NP_627170.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3202230	3203078	.	-	.	ID=id3672;Dbxref=GeneID:1098379;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 111.10%2C E-value 2.1e-29;gbkey=misc_feature;gene=SCE59.05c
NC_003888.3	RefSeq	sequence_feature	3203445	3203477	.	-	.	ID=id3673;Dbxref=GeneID:1098379;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE59.05c
NC_003888.3	RefSeq	ribosome_entry_site	3203516	3203521	.	-	.	ID=id3674;gbkey=RBS
NC_003888.3	RefSeq	gene	3203751	3204044	.	-	.	ID=gene2961;Dbxref=GeneID:1098380;Name=SCE59.06c;gbkey=Gene;gene=SCE59.06c;gene_biotype=protein_coding;gene_synonym=SCE59.06c;locus_tag=SCO2947
NC_003888.3	RefSeq	CDS	3203751	3204044	.	-	0	ID=cds2907;Parent=gene2961;Dbxref=Genbank:NP_627171.1,GeneID:1098380;Name=NP_627171.1;Note=SCE59.06c%2C hypothetical protein%2C len: 97 aa%3B similar to TR:O07209 (EMBL:Z96072) Mycobacterium tuberculosis hypothetical 9.0 kD protein MTCY05A6.29%2C len: 82 aa%3B fasta scores: opt: 200 z-score: 268.5 E(): 1.5e-07%3B 51.6%25 identity in 62 aa overlap;gbkey=CDS;gene=SCE59.06c;product=hypothetical protein;protein_id=NP_627171.1;transl_table=11
NC_003888.3	RefSeq	gene	3204066	3204647	.	-	.	ID=gene2962;Dbxref=GeneID:1098381;Name=SCE59.07c;gbkey=Gene;gene=SCE59.07c;gene_biotype=protein_coding;gene_synonym=SCE59.07c;locus_tag=SCO2948
NC_003888.3	RefSeq	CDS	3204066	3204647	.	-	0	ID=cds2908;Parent=gene2962;Dbxref=Genbank:NP_627172.1,GeneID:1098381;Name=NP_627172.1;Note=SCE59.07c%2C hypothetical protein%2C len: 193 aa%3B similar to various hypothetical proteins%2C e.g. TR:P71608 (EMBL:Z80233) Mycobacterium tuberculosis hypothetical 21.8 kD protein CY10H4.38%2C 202 aa%3B fasta scores: opt: 525 z-score: 594.5 E(): 1.1e-25%3B 46.7%25 identity in 182 aa overlap;gbkey=CDS;gene=SCE59.07c;product=hypothetical protein;protein_id=NP_627172.1;transl_table=11
NC_003888.3	RefSeq	gene	3204872	3206218	.	+	.	ID=gene2963;Dbxref=GeneID:1098382;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murA,SCE59.08;locus_tag=SCO2949
NC_003888.3	RefSeq	CDS	3204872	3206218	.	+	0	ID=cds2909;Parent=gene2963;Dbxref=Genbank:NP_627173.1,GeneID:1098382;Name=NP_627173.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;gene=murA;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=NP_627173.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3206235	3206276	.	-	.	ID=id3675;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3206403	3206684	.	-	.	ID=gene2964;Dbxref=GeneID:1098383;Name=hup;gbkey=Gene;gene=hup;gene_biotype=protein_coding;gene_synonym=hup,SCE59.09c;locus_tag=SCO2950
NC_003888.3	RefSeq	CDS	3206403	3206684	.	-	0	ID=cds2910;Parent=gene2964;Dbxref=Genbank:NP_627174.1,GeneID:1098383;Name=NP_627174.1;Note=SCE59.09%2C hup%2C DNA-binding protein Hu (hs1)%2C len: 93 aa%3B identical to SW:DBH_STRLI (EMBL:AB001381) Streptomyces lividans DNA-binding protein hu (HS1) Hup%2C 93 aa and highly similar to SW:DBH_BACSU (EMBL:X66448) Bacillus subtilis DNA-binding protein II (HB) (HU)%2C 92 aa%3B fasta scores: opt: 237 z-score: 311.2 E(): 6.4e-10%3B 40.9%25 identity in 93 aa overlap. Contains Pfam match to entry PF00216 Bac_DNA_binding%2C Bacterial DNA-binding protein;gbkey=CDS;gene=hup;product=DNA-binding protein HU (hs1);protein_id=NP_627174.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3206412	3206684	.	-	.	ID=id3676;Dbxref=GeneID:1098383;Note=Pfam match to entry PF00216 Bac_DNA_binding%2C Bacterial DNA-binding protein%2C score 117.40%2C E-value 1.4e-32;gbkey=misc_feature;gene=hup
NC_003888.3	RefSeq	ribosome_entry_site	3206692	3206696	.	-	.	ID=id3677;gbkey=RBS
NC_003888.3	RefSeq	gene	3207037	3208452	.	-	.	ID=gene2965;Dbxref=GeneID:1098384;Name=SCE59.10c;gbkey=Gene;gene=SCE59.10c;gene_biotype=protein_coding;gene_synonym=SCE59.10c;locus_tag=SCO2951
NC_003888.3	RefSeq	CDS	3207037	3208452	.	-	0	ID=cds2911;Parent=gene2965;Dbxref=Genbank:NP_627175.1,GeneID:1098384;Name=NP_627175.1;Note=SCE59.10c%2C probable malate oxidoreductase%2C len: 471 aa%3B similar to SW:MAOX_BACST (EMBL:M19485) Bacillus stearothermophilus NAD-dependent malic enzyme (EC 1.1.1.38) (NAD-ME) 478 aa%3B fasta scores: opt: 1778 z-score: 1887.0 E(): 0%3B 58.8%25 identity in 471 aa overlap and to SW:MAO2_ECOLI (EMBL:AE000333) Escherichia coli NADP-dependent malic enzyme (EC 1.1.1.40) MaeB%2C 759 aa%3B fasta scores: opt: 1092 z-score: 1158.4 E(): 0%3B 46.4%25 identity in 394 aa overlap Contains two Pfam matches to entry PF00390 malic%2C Malic enzyme;gbkey=CDS;gene=SCE59.10c;product=malate oxidoreductase;protein_id=NP_627175.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3207136	3207291	.	-	.	ID=id3678;Dbxref=GeneID:1098384;Note=Pfam match to entry PF00390 malic%2C Malic enzyme%2C score 29.60%2C E-value 2e-06;gbkey=misc_feature;gene=SCE59.10c
NC_003888.3	RefSeq	sequence_feature	3207613	3207765	.	-	.	ID=id3679;Dbxref=GeneID:1098384;Note=Pfam match to entry PF00390 malic%2C Malic enzyme%2C score 22.30%2C E-value 0.00013;gbkey=misc_feature;gene=SCE59.10c
NC_003888.3	RefSeq	ribosome_entry_site	3208461	3208465	.	-	.	ID=id3680;gbkey=RBS
NC_003888.3	RefSeq	gene	3208887	3211121	.	-	.	ID=gene2966;Dbxref=GeneID:1098385;Name=SCE59.11c;gbkey=Gene;gene=SCE59.11c;gene_biotype=protein_coding;gene_synonym=SCE59.11c;locus_tag=SCO2952
NC_003888.3	RefSeq	CDS	3208887	3211121	.	-	0	ID=cds2912;Parent=gene2966;Dbxref=Genbank:NP_627176.1,GeneID:1098385;Name=NP_627176.1;Note=SCE59.11c%2C possible helicase%2C len: 744 aa%3B similar to TR:O32215 (EMBL:Z99121) Bacillus subtilis YvgS protein%2C 774 aa%3B fasta scores: opt: 346 z-score: 378.5 E(): 1.1e-13%3B 23.1%25 identity in 808 aa overlap and to C-terminal region of SW:UVRD_MYCLE (EMBL:U00016) Mycobacterium leprae probable DNA helicase II homolog (EC 3.6.1.-) UvrD%2C 457 aa%3B fasta scores: opt: 155 z-score: 172.1 E(): 0.036%3B 26.6%25 identity in 241 aa overlap. Contains Pfam match to entry PF01443 Viral_helicase1%2C Viral (Superfamily 1) RNA helicase and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible helix-turn-helix motif at residues 638..659 (+2.82 SD);gbkey=CDS;gene=SCE59.11c;product=helicase;protein_id=NP_627176.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3208941	3209072	.	-	.	ID=id3681;Dbxref=GeneID:1098385;Note=Pfam match to entry PF01443 Viral_helicase1%2C Viral (Superfamily 1) RNA helicase%2C score 23.30%2C E-value 5.1e-06;gbkey=misc_feature;gene=SCE59.11c
NC_003888.3	RefSeq	sequence_feature	3210426	3210449	.	-	.	ID=id3682;Dbxref=GeneID:1098385;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE59.11c
NC_003888.3	RefSeq	ribosome_entry_site	3211231	3211235	.	-	.	ID=id3683;gbkey=RBS
NC_003888.3	RefSeq	gene	3211306	3212094	.	-	.	ID=gene2967;Dbxref=GeneID:1098386;Name=SCE59.12c;gbkey=Gene;gene=SCE59.12c;gene_biotype=protein_coding;gene_synonym=SCE59.12c;locus_tag=SCO2953
NC_003888.3	RefSeq	CDS	3211306	3212094	.	-	0	ID=cds2913;Parent=gene2967;Dbxref=Genbank:NP_627177.1,GeneID:1098386;Name=NP_627177.1;Note=SCE59.12c%2C possible membrane protein%2C len: 262 aa%3B similar to TR:CAB63193 (EMBL:AL133469) Streptomyces coelicolor  membrane protein SCM10.32%2C 216 aa%3B fasta scores: opt: 204 z-score: 218.0 E(): 9.9e-05%3B 37.2%25 identity in 253 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE59.12c;product=hypothetical protein;protein_id=NP_627177.1;transl_table=11
NC_003888.3	RefSeq	gene	3212154	3212738	.	-	.	ID=gene2968;Dbxref=GeneID:1098387;Name=SCE59.13c;gbkey=Gene;gene=SCE59.13c;gene_biotype=protein_coding;gene_synonym=SCE59.13c;locus_tag=SCO2954
NC_003888.3	RefSeq	CDS	3212154	3212738	.	-	0	ID=cds2914;Parent=gene2968;Dbxref=Genbank:NP_627178.1,GeneID:1098387;Name=NP_627178.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B in M. tuberculosis this protein regulates polyketide synthases and  or membrane proteins;gbkey=CDS;gene=SCE59.13c;product=RNA polymerase sigma factor SigL;protein_id=NP_627178.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3212403	3212603	.	-	.	ID=id3684;Dbxref=GeneID:1098387;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 45.00%2C E-value 1.7e-09;gbkey=misc_feature;gene=SCE59.13c
NC_003888.3	RefSeq	sequence_feature	3212466	3212564	.	-	.	ID=id3685;Dbxref=GeneID:1098387;Note=PS01063 Sigma-70 factors ECF subfamily signature;gbkey=misc_feature;gene=SCE59.13c
NC_003888.3	RefSeq	ribosome_entry_site	3212739	3212742	.	-	.	ID=id3686;gbkey=RBS
NC_003888.3	RefSeq	gene	3212863	3213453	.	-	.	ID=gene2969;Dbxref=GeneID:1098388;Name=SCE59.14c;gbkey=Gene;gene=SCE59.14c;gene_biotype=protein_coding;gene_synonym=SCE59.14c;locus_tag=SCO2955
NC_003888.3	RefSeq	CDS	3212863	3213453	.	-	0	ID=cds2915;Parent=gene2969;Dbxref=Genbank:NP_627179.1,GeneID:1098388;Name=NP_627179.1;Note=SCE59.14c%2C hypothetical protein%2C len: 196 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB56723 (EMBL:AL121600) Streptomyces coelicolor hypothetical 22.2kD protein SCF76.03%2C 204 aa%3B fasta scores: opt: 357 z-score: 403.5 E(): 4.6e-15%3B 37.4%25 identity in 187 aa overlap;gbkey=CDS;gene=SCE59.14c;product=hypothetical protein;protein_id=NP_627179.1;transl_table=11
NC_003888.3	RefSeq	gene	3213669	3214232	.	+	.	ID=gene2970;Dbxref=GeneID:1098389;Name=SCE59.15;gbkey=Gene;gene=SCE59.15;gene_biotype=protein_coding;gene_synonym=SCE59.15;locus_tag=SCO2956
NC_003888.3	RefSeq	CDS	3213669	3214232	.	+	0	ID=cds2916;Parent=gene2970;Dbxref=Genbank:NP_627180.1,GeneID:1098389;Name=NP_627180.1;Note=SCE59.15%2C possible integral-membrane protein%2C len: 187 aa%3B similar to TR:CAB66271 (EMBL:AL136519) Streptomyces coelicolor  integral-membrane protein SCC57A.03c%2C 199 aa%3B fasta scores: opt: 333 z-score: 376.0 E(): 1.6e-13%3B 47.3%25 identity in 182 aa overlap. Contains possible hydrohpobic membrane spanning regions;gbkey=CDS;gene=SCE59.15;product=hypothetical protein;protein_id=NP_627180.1;transl_table=11
NC_003888.3	RefSeq	gene	3214479	3215057	.	-	.	ID=gene2971;Dbxref=GeneID:1098390;Name=SCE59.16c;gbkey=Gene;gene=SCE59.16c;gene_biotype=protein_coding;gene_synonym=SCE59.16c;locus_tag=SCO2957
NC_003888.3	RefSeq	CDS	3214479	3215057	.	-	0	ID=cds2917;Parent=gene2971;Dbxref=Genbank:NP_627181.1,GeneID:1098390;Name=NP_627181.1;Note=SCE59.16c%2C unknown%2C len: 192 aa;gbkey=CDS;gene=SCE59.16c;product=hypothetical protein;protein_id=NP_627181.1;transl_table=11
NC_003888.3	RefSeq	gene	3215125	3216312	.	-	.	ID=gene2972;Dbxref=GeneID:1098391;Name=SCE59.17c;gbkey=Gene;gene=SCE59.17c;gene_biotype=protein_coding;gene_synonym=SCE59.17c;locus_tag=SCO2958
NC_003888.3	RefSeq	CDS	3215125	3216312	.	-	0	ID=cds2918;Parent=gene2972;Dbxref=Genbank:NP_627182.1,GeneID:1098391;Name=NP_627182.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane;gbkey=CDS;gene=SCE59.17c;product=bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein;protein_id=NP_627182.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3215176	3215343	.	-	.	ID=id3687;Dbxref=GeneID:1098391;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 27.10%2C E-value 9.9e-07;gbkey=misc_feature;gene=SCE59.17c
NC_003888.3	RefSeq	ribosome_entry_site	3216323	3216326	.	-	.	ID=id3688;gbkey=RBS
NC_003888.3	RefSeq	gene	3216421	3217779	.	-	.	ID=gene2973;Dbxref=GeneID:1098392;Name=SCE59.18c;gbkey=Gene;gene=SCE59.18c;gene_biotype=protein_coding;gene_synonym=SCE59.18c;locus_tag=SCO2959
NC_003888.3	RefSeq	CDS	3216421	3217779	.	-	0	ID=cds2919;Parent=gene2973;Dbxref=Genbank:NP_627183.1,GeneID:1098392;Name=NP_627183.1;Note=SCE59.18c%2C probable nitrate extrusion protein%2C len: 452 aa%3B similar to SW:NARK_ECOLI (EMBL:X15996) Escherichia coli nitrite extrusion protein 1 (nitrite facilitator 1) NarK%2C 463 aa%3B fasta scores: opt: 526 z-score: 590.8 E(): 1.7e-25%3B 39.7%25 identity in 451 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE59.18c;product=nitrate extrusion protein;protein_id=NP_627183.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3217784	3217788	.	-	.	ID=id3689;gbkey=RBS
NC_003888.3	RefSeq	gene	3217912	3218859	.	-	.	ID=gene2974;Dbxref=GeneID:1098393;Name=SCE59.19c;gbkey=Gene;gene=SCE59.19c;gene_biotype=protein_coding;gene_synonym=SCE59.19c;locus_tag=SCO2960
NC_003888.3	RefSeq	CDS	3217912	3218859	.	-	0	ID=cds2920;Parent=gene2974;Dbxref=Genbank:NP_627184.1,GeneID:1098393;Name=NP_627184.1;Note=SCE59.19c%2C possible integral membrane protein%2C len: 315 aa. Contains possible hydrophobic membrane spanning regions and proline rich C-terminal region;gbkey=CDS;gene=SCE59.19c;product=hypothetical protein;protein_id=NP_627184.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3218867	3218870	.	-	.	ID=id3690;gbkey=RBS
NC_003888.3	RefSeq	gene	3218973	3220178	.	-	.	ID=gene2975;Dbxref=GeneID:1098394;Name=SCE59.20c;gbkey=Gene;gene=SCE59.20c;gene_biotype=protein_coding;gene_synonym=SCE59.20c;locus_tag=SCO2961
NC_003888.3	RefSeq	CDS	3218973	3220178	.	-	0	ID=cds2921;Parent=gene2975;Dbxref=Genbank:NP_627185.1,GeneID:1098394;Name=NP_627185.1;Note=SCE59.20c%2C possible integral membrane protein%2C len: 401 aa%3B similar to TR:Q9XAP7 (EMBL:AL078618) Streptomyces coelicolor  integral membrane transferase SC10A7.28c%2C 363 aa%3B fasta scores: opt: 397 z-score: 390.6 E(): 2.4e-14%3B 46.6%25 identity in 369 aa overlap. Contains possible hydrophobic membrane spanning regions and match to Prosite entry PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=CDS;gene=SCE59.20c;product=hypothetical protein;protein_id=NP_627185.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3219234	3219281	.	-	.	ID=id3691;Dbxref=GeneID:1098394;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=misc_feature;gene=SCE59.20c
NC_003888.3	RefSeq	gene	3220316	3222520	.	-	.	ID=gene2976;Dbxref=GeneID:1098395;Name=SCE59.21c;gbkey=Gene;gene=SCE59.21c;gene_biotype=protein_coding;gene_synonym=SCE59.21c;locus_tag=SCO2962
NC_003888.3	RefSeq	CDS	3220316	3222520	.	-	0	ID=cds2922;Parent=gene2976;Dbxref=Genbank:NP_627186.1,GeneID:1098395;Name=NP_627186.1;Note=SCE59.21c%2C possible bi-functional transferase/deacetylase%2C len: 734 aa%3B similar to TR:Q9XAP6 (EMBL:AL078618) Streptomyces coelicolor bi-functional transferase/deacetylase SC10A7.29c%2C 743 aa%3B fasta scores: opt: 2045 z-score: 2233.4 E(): 0%3B 59.5%25 identity in 726 aa overlap and N-terminal region similar to SW:NODB_RHIME (EMBL:X01649) Rhizobium meliloti chitooligosaccharide deacetylase (EC 3.5.1.-) (nodulation protein B) NodB%2C 217 aa%3B fasta scores: opt: 411 z-score: 455.6 E(): 5.8e-18%3B 37.9%25 identity in 198 aa overlap. Contains Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase at N-terminal region and Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases at C-terminal region and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE59.21c;product=bifunctional transferase/deacetylase;protein_id=NP_627186.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3220958	3221434	.	-	.	ID=id3692;Dbxref=GeneID:1098395;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 82.10%2C E-value 1.2e-20;gbkey=misc_feature;gene=SCE59.21c
NC_003888.3	RefSeq	sequence_feature	3221798	3222253	.	-	.	ID=id3693;Dbxref=GeneID:1098395;Note=Pfam match to entry PF01522 Polysac_deacet%2C Polysaccharide deacetylase%2C score 148.60%2C E-value 1.1e-40;gbkey=misc_feature;gene=SCE59.21c
NC_003888.3	RefSeq	gene	3222520	3224004	.	-	.	ID=gene2977;Dbxref=GeneID:1098396;Name=SCE59.22c;gbkey=Gene;gene=SCE59.22c;gene_biotype=protein_coding;gene_synonym=SCE59.22c;locus_tag=SCO2963
NC_003888.3	RefSeq	CDS	3222520	3224004	.	-	0	ID=cds2923;Parent=gene2977;Dbxref=Genbank:NP_627187.1,GeneID:1098396;Name=NP_627187.1;Note=SCE59.22c%2C membrane protein%2C len: 494 aa. Contains C-terminal region rich in proline and glycine. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE59.22c;product=hypothetical protein;protein_id=NP_627187.1;transl_table=11
NC_003888.3	RefSeq	gene	3224084	3225055	.	-	.	ID=gene2978;Dbxref=GeneID:1098397;Name=SCE59.23c;gbkey=Gene;gene=SCE59.23c;gene_biotype=protein_coding;gene_synonym=SCE59.23c;locus_tag=SCO2964
NC_003888.3	RefSeq	CDS	3224084	3225055	.	-	0	ID=cds2924;Parent=gene2978;Dbxref=Genbank:NP_627188.1,GeneID:1098397;Name=NP_627188.1;Note=SCE59.23c%2C probable lysR-family transcriptional regulator%2C len: 323 aa%3B similar to TR:O88132 (EMBL:AJ006517) Streptomyces lipmanii lysR-type transcriptional regulator StgR%2C 327 aa%3B fasta scores: opt: 551 z-score: 619.3 E(): 4.4e-27%3B 36.6%25 identity in 320 aa overlap and to SW:XAPR_ECOLI (EMBL:X63976) Escherichia coli xanthosine operon regulatory protein XapR%2C 294 aa%3B fasta scores: opt: 364 z-score: 412.4 E(): 1.5e-15%3B 33.6%25 identity in 301 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Contains possible helix-turn-helix motif at residues 22..43 (+3.25 SD);gbkey=CDS;gene=SCE59.23c;product=LysR family transcriptional regulator;protein_id=NP_627188.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3224618	3225031	.	-	.	ID=id3694;Dbxref=GeneID:1098397;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 106.00%2C E-value 7.1e-28;gbkey=misc_feature;gene=SCE59.23c
NC_003888.3	RefSeq	sequence_feature	3224897	3224989	.	-	.	ID=id3695;Dbxref=GeneID:1098397;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCE59.23c
NC_003888.3	RefSeq	gene	3225334	3226434	.	+	.	ID=gene2979;Dbxref=GeneID:1098398;Name=SCE59.24;gbkey=Gene;gene=SCE59.24;gene_biotype=protein_coding;gene_synonym=SCE59.24;locus_tag=SCO2965
NC_003888.3	RefSeq	CDS	3225334	3226434	.	+	0	ID=cds2925;Parent=gene2979;Dbxref=Genbank:NP_627189.1,GeneID:1098398;Name=NP_627189.1;Note=SCE59.24%2C possible transport protein%2C len: 366 aa%3B similar to TR:CAB59494 (EMBL:AL132648) Streptomyces coelicolor  transport protein SCI41.24c%2C 405 aa%3B fasta scores: opt: 513 z-score: 569.7 E(): 2.6e-24%3B 31.1%25 identity in 366 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE59.24;product=transporter;protein_id=NP_627189.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3226489	3226534	.	-	.	ID=id3696;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3226540	3226936	.	-	.	ID=gene2980;Dbxref=GeneID:3240024;Name=SCOs02;gbkey=Gene;gene_biotype=misc_RNA;locus_tag=SCOs02
NC_003888.3	RefSeq	transcript	3226540	3226936	.	-	.	ID=rna30;Parent=gene2980;Dbxref=GeneID:3240024;Note=ssrA gene coding for tmRNA%2C 397 bp%3B similar to SW:MT10SARNA (EMBL:X60301) Mycobacterium tuberculosis gene for 10Sa RNA%2C 606 bp%3B blastn scores: Score %3D 467 (70.1 bits)%2C Expect %3D 8.0e-15%2C P %3D 8.0e-15 Identities %3D 157/220 (71%25)%2C Positives %3D 157/220 (71%25)%2C Strand %3D Plus / Plus;gbkey=misc_RNA
NC_003888.3	RefSeq	exon	3226540	3226936	.	-	.	ID=id3697;Parent=rna30;Dbxref=GeneID:3240024;Note=ssrA gene coding for tmRNA%2C 397 bp%3B similar to SW:MT10SARNA (EMBL:X60301) Mycobacterium tuberculosis gene for 10Sa RNA%2C 606 bp%3B blastn scores: Score %3D 467 (70.1 bits)%2C Expect %3D 8.0e-15%2C P %3D 8.0e-15 Identities %3D 157/220 (71%25)%2C Positives %3D 157/220 (71%25)%2C Strand %3D Plus / Plus;gbkey=misc_RNA
NC_003888.3	RefSeq	gene	3227050	3227529	.	-	.	ID=gene2981;Dbxref=GeneID:1098399;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;gene_synonym=SCE59.25c;locus_tag=SCO2966
NC_003888.3	RefSeq	CDS	3227050	3227529	.	-	0	ID=cds2926;Parent=gene2981;Dbxref=Genbank:NP_627190.1,GeneID:1098399;Name=NP_627190.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=NP_627190.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3227305	3227508	.	-	.	ID=id3698;Dbxref=GeneID:1098399;Note=Pfam match to entry PF01668 SmpB%2C SmpB protein%2C score 154.50%2C E-value 1.8e-42;gbkey=misc_feature;gene=smpB
NC_003888.3	RefSeq	sequence_feature	3227410	3227448	.	-	.	ID=id3699;Dbxref=GeneID:1098399;Note=PS01317 Protein smpB signature;gbkey=misc_feature;gene=smpB
NC_003888.3	RefSeq	gene	3227576	3228700	.	-	.	ID=gene2982;Dbxref=GeneID:1098400;Name=SCE59.26c;gbkey=Gene;gene=SCE59.26c;gene_biotype=protein_coding;gene_synonym=SCE59.26c;locus_tag=SCO2967
NC_003888.3	RefSeq	CDS	3227576	3228700	.	-	0	ID=cds2927;Parent=gene2982;Dbxref=Genbank:NP_627191.1,GeneID:1098400;Name=NP_627191.1;Note=SCE59.26c%2C probable carboxy-terminal processing protease precursor%2C len: 374 aa%3B similar to SW:CTPA_BARBA (EMBL:L37094) Bartonella bacilliformis carboxy-terminal processing protease precursor (C-terminal processing protease) CtpA%2C 434 aa%3B fasta scores: opt: 505 z-score: 527.2 E(): 6e-22%3B 30.6%25 identity in 337 aa overlap. Contains Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF) and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE59.26c;product=carboxy-terminal processing protease;protein_id=NP_627191.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3228197	3228457	.	-	.	ID=id3700;Dbxref=GeneID:1098400;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF).%2C score 44.70%2C E-value 2e-09;gbkey=misc_feature;gene=SCE59.26c
NC_003888.3	RefSeq	gene	3228832	3229749	.	-	.	ID=gene2983;Dbxref=GeneID:1098401;Name=SCE59.27c;gbkey=Gene;gene=SCE59.27c;gene_biotype=protein_coding;gene_synonym=SCE59.27c;locus_tag=SCO2968
NC_003888.3	RefSeq	CDS	3228832	3229749	.	-	0	ID=cds2928;Parent=gene2983;Dbxref=Genbank:NP_627192.1,GeneID:1098401;Name=NP_627192.1;Note=SCE59.27c%2C possible cell division protein%2C len: 305 aa%3B similar to TR:P96293 (EMBL:X70031) Mycobacterium tuberculosis FtsX%2C 297 aa%3B fasta scores: opt: 591 z-score: 681.4 E(): 1.5e-30%3B 34.9%25 identity in 304 aa overlap and to SW:FTSX_ECOLI (EMBL:X04398) Escherichia coli cell division protein FtsX%2C 352 aa%3B fasta scores: opt: 194 z-score: 228.3 E(): 2.7e-05%3B 23.4%25 identity in 295 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE59.27c;product=cell division protein;protein_id=NP_627192.1;transl_table=11
NC_003888.3	RefSeq	gene	3229793	3230482	.	-	.	ID=gene2984;Dbxref=GeneID:1098402;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;gene_synonym=ftsE,SCE59.28c;locus_tag=SCO2969
NC_003888.3	RefSeq	CDS	3229793	3230482	.	-	0	ID=cds2929;Parent=gene2984;Dbxref=Genbank:NP_627193.1,GeneID:1098402;Name=NP_627193.1;Note=SCE59.28c%2C ftsE%2C cell division ATP-binding protein%2C len: 229 aa%3B similar to TR:O05779 (EMBL:Z95150) Mycobacterium tuberculosis FtsE%2C 229 aa%3B fasta scores: opt: 908 z-score: 1050.8 E(): 0%3B 62.4%25 identity in 226 aa overlap and to SW:FTSE_ECOLI (EMBL:X04398) Escherichia coli cell division ATP-binding protein FtsE%2C 222 aa%3B fasta scores: opt: 646 z-score: 751.1 E(): 0%3B 49.1%25 identity in 216 aa overlap . Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C two matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and match to Prosite entry PS00211 ABC transporters family signature;gbkey=CDS;gene=ftsE;product=cell division ATP-binding protein;protein_id=NP_627193.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3229841	3230398	.	-	.	ID=id3701;Dbxref=GeneID:1098402;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 229.70%2C E-value 4.2e-65;gbkey=misc_feature;gene=ftsE
NC_003888.3	RefSeq	sequence_feature	3230024	3230068	.	-	.	ID=id3702;Dbxref=GeneID:1098402;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=ftsE
NC_003888.3	RefSeq	sequence_feature	3230150	3230173	.	-	.	ID=id3703;Dbxref=GeneID:1098402;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ftsE
NC_003888.3	RefSeq	sequence_feature	3230354	3230377	.	-	.	ID=id3704;Dbxref=GeneID:1098402;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ftsE
NC_003888.3	RefSeq	ribosome_entry_site	3230683	3230687	.	+	.	ID=id3705;gbkey=RBS
NC_003888.3	RefSeq	gene	3230696	3230890	.	+	.	ID=gene2985;Dbxref=GeneID:1098403;Name=SCE59.29;gbkey=Gene;gene=SCE59.29;gene_biotype=protein_coding;gene_synonym=SCE59.29;locus_tag=SCO2970
NC_003888.3	RefSeq	CDS	3230696	3230890	.	+	0	ID=cds2930;Parent=gene2985;Dbxref=Genbank:NP_627194.1,GeneID:1098403;Name=NP_627194.1;Note=SCE59.29%2C membrane protein%2C len: 64 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE59.29;product=hypothetical protein;protein_id=NP_627194.1;transl_table=11
NC_003888.3	RefSeq	gene	3231048	3231839	.	-	.	ID=gene2986;Dbxref=GeneID:1098404;Name=SCE59.30c;gbkey=Gene;gene=SCE59.30c;gene_biotype=protein_coding;gene_synonym=SCE59.30c;locus_tag=SCO2971
NC_003888.3	RefSeq	CDS	3231048	3231839	.	-	0	ID=cds2931;Parent=gene2986;Dbxref=Genbank:NP_627195.1,GeneID:1098404;Name=NP_627195.1;Note=SCE59.30c%2C possible hypothetical protein%2C len: 263 aa. Contains the following repeats: 2x(NGGNGNGGNGD) and 18x(PDT). Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE59.30c;product=hypothetical protein;protein_id=NP_627195.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3231309	3231347	.	-	.	ID=id3706;Dbxref=GeneID:1098404;gbkey=repeat_region;gene=SCE59.30c
NC_003888.3	RefSeq	repeat_region	3231354	3231389	.	-	.	ID=id3707;Dbxref=GeneID:1098404;gbkey=repeat_region;gene=SCE59.30c
NC_003888.3	RefSeq	repeat_region	3231471	3231635	.	-	.	ID=id3708;Dbxref=GeneID:1098404;Note=18x degenerate repeat translated in SCE59.30c;gbkey=repeat_region;gene=SCE59.30c
NC_003888.3	RefSeq	sequence_feature	3232165	3234051	.	-	.	ID=id3709;Note=previously sequenced region (EMBL:D86821) S. coelicolor;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3232165	3233271	.	-	.	ID=gene2987;Dbxref=GeneID:1098405;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;gene_synonym=SCE59.31c;locus_tag=SCO2972
NC_003888.3	RefSeq	CDS	3232165	3233271	.	-	0	ID=cds2932;Parent=gene2987;Dbxref=Genbank:NP_627196.1,GeneID:1098405;Name=NP_627196.1;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1;gbkey=CDS;gene=prfB;product=peptide chain release factor 2;protein_id=NP_627196.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3232264	3232866	.	-	.	ID=id3710;Dbxref=GeneID:1098405;Note=Pfam match to entry PF00472 RF-1%2C Prokaryotic-type class I peptide chain release factors%2C score 333.10%2C E-value 2.7e-107;gbkey=misc_feature;gene=prfB
NC_003888.3	RefSeq	sequence_feature	3232492	3232542	.	-	.	ID=id3711;Dbxref=GeneID:1098405;Note=PS00745 Prokaryotic-type class I peptide chain release factors signature;gbkey=misc_feature;gene=prfB
NC_003888.3	RefSeq	gene	3233349	3234602	.	-	.	ID=gene2988;Dbxref=GeneID:1098406;Name=pkaB;gbkey=Gene;gene=pkaB;gene_biotype=protein_coding;gene_synonym=pkaB,SCE50.01c,SCE59.32c;locus_tag=SCO2973
NC_003888.3	RefSeq	CDS	3233349	3234602	.	-	0	ID=cds2933;Parent=gene2988;Dbxref=Genbank:NP_733588.1,GeneID:1098406;Name=NP_733588.1;Note=SCE59.32c%2C pkaB%2C Ser/Thr protein kinase (partial)%2C len: >233 aa%3B identical to C-terminal region of previously sequenced SW:PKAB_STRCO (EMBL:D86821) Streptomyces coelicolor Ser/Thr protein kinase PkaB%2C 417 aa. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain. Contains possible hydrophobic membrane spanning region~SCE50.01%2C pkaB%2C Ser/Thr protein kinase%2C len: >222 aa%3B identical to C-terminal region of previously sequenced SW:PKAB_STRCO (EMBL:D86821) Streptomyces coelicolor Ser/Thr protein kinase PkaB (EC 2.7.1.-.)%2C 417 aa. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and match to Prosite entry PS00108 Ser/Thr protein kinases active-site signature;gbkey=CDS;gene=pkaB;product=Ser/Thr protein kinase;protein_id=NP_733588.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3233817	3234023	.	-	.	ID=id3712;Dbxref=GeneID:1098406;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 28.10%2C E-value 1.1e-06;gbkey=misc_feature;gene=pkaB
NC_003888.3	RefSeq	sequence_feature	3233935	3237605	.	-	.	ID=id3713;Note=previously sequenced fragment EMBL:D86821 Streptomyces coelicolor DNA for PkaA%2C PkaB and PrfB%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	3233946	3234578	.	-	.	ID=id3714;Dbxref=GeneID:1098406;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 171.00%2C E-value 1.9e-47;gbkey=misc_feature;gene=pkaB
NC_003888.3	RefSeq	sequence_feature	3234189	3234227	.	-	.	ID=id3715;Dbxref=GeneID:1098406;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaB
NC_003888.3	RefSeq	ribosome_entry_site	3234608	3234612	.	-	.	ID=id3716;gbkey=RBS
NC_003888.3	RefSeq	gene	3234708	3236339	.	-	.	ID=gene2989;Dbxref=GeneID:1098407;Name=pkaA;gbkey=Gene;gene=pkaA;gene_biotype=protein_coding;gene_synonym=pkaA,SCE50.02c;locus_tag=SCO2974
NC_003888.3	RefSeq	CDS	3234708	3236339	.	-	0	ID=cds2934;Parent=gene2989;Dbxref=Genbank:NP_627197.1,GeneID:1098407;Name=NP_627197.1;Note=SCE50.02c%2C pkaA%2C Ser/Thr protein kinase%2C len: 543 aa%3B identical to previously sequenced SW:PKAA_STRCO (EMBL:D86821) Streptomyces coelicolor Ser/Thr protein kinase PkaA (EC 2.7.1.-)%2C 543 aa. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and match to Prosite entry PS00108 Ser/Thr protein kinases active-site signature;gbkey=CDS;gene=pkaA;product=Ser/Thr protein kinase;protein_id=NP_627197.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3235533	3236318	.	-	.	ID=id3717;Dbxref=GeneID:1098407;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 248.80%2C E-value 7.3e-71;gbkey=misc_feature;gene=pkaA
NC_003888.3	RefSeq	sequence_feature	3235890	3235928	.	-	.	ID=id3718;Dbxref=GeneID:1098407;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaA
NC_003888.3	RefSeq	ribosome_entry_site	3236348	3236352	.	-	.	ID=id3719;gbkey=RBS
NC_003888.3	RefSeq	gene	3236737	3240774	.	+	.	ID=gene2990;Dbxref=GeneID:1098408;Name=SCE50.03;gbkey=Gene;gene=SCE50.03;gene_biotype=protein_coding;gene_synonym=SCE50.03;locus_tag=SCO2975
NC_003888.3	RefSeq	CDS	3236737	3240774	.	+	0	ID=cds2935;Parent=gene2990;Dbxref=Genbank:NP_627198.1,GeneID:1098408;Name=NP_627198.1;Note=SCE50.03%2C unknown%2C len: 1345 aa. High G+C content (80.71%25) and high also in alanine%2C glycine and proline amino acid residues;gbkey=CDS;gene=SCE50.03;product=hypothetical protein;protein_id=NP_627198.1;transl_table=11
NC_003888.3	RefSeq	gene	3240815	3241444	.	-	.	ID=gene2991;Dbxref=GeneID:1098409;Name=SCE50.04c;gbkey=Gene;gene=SCE50.04c;gene_biotype=protein_coding;gene_synonym=SCE50.04c;locus_tag=SCO2976
NC_003888.3	RefSeq	CDS	3240815	3241444	.	-	0	ID=cds2936;Parent=gene2991;Dbxref=Genbank:NP_627199.1,GeneID:1098409;Name=NP_627199.1;Note=SCE50.04c%2C unknown%2C len: 209 aa;gbkey=CDS;gene=SCE50.04c;product=hypothetical protein;protein_id=NP_627199.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3241449	3241453	.	-	.	ID=id3720;gbkey=RBS
NC_003888.3	RefSeq	gene	3241532	3242731	.	+	.	ID=gene2992;Dbxref=GeneID:1098410;Name=SCE50.05;gbkey=Gene;gene=SCE50.05;gene_biotype=protein_coding;gene_synonym=SCE50.05;locus_tag=SCO2977
NC_003888.3	RefSeq	CDS	3241532	3242731	.	+	0	ID=cds2937;Parent=gene2992;Dbxref=Genbank:NP_627200.1,GeneID:1098410;Name=NP_627200.1;Note=SCE50.05%2C unknown%2C len: 399 aa;gbkey=CDS;gene=SCE50.05;product=hypothetical protein;protein_id=NP_627200.1;transl_table=11
NC_003888.3	RefSeq	gene	3242925	3244322	.	+	.	ID=gene2993;Dbxref=GeneID:1098411;Name=SCE50.06;gbkey=Gene;gene=SCE50.06;gene_biotype=protein_coding;gene_synonym=SCE50.06;locus_tag=SCO2978
NC_003888.3	RefSeq	CDS	3242925	3244322	.	+	0	ID=cds2938;Parent=gene2993;Dbxref=Genbank:NP_627201.1,GeneID:1098411;Name=NP_627201.1;Note=SCE50.06%2C possible hypothetical protein%2C len: 465 aa%3B similar to TR:Q55471 (EMBL:D64006) Synechocystis sp. hypothetical 46.5 kD protein%2C 421 aa%3B fasta scores: opt: 788 z-score: 803.7 E(): 0%3B 35.2%25 identity in 386 aa overlap%2C to C-terminal part of SW:MSME_STRMU (EMBL:M77351) Streptococcus mutans multiple sugar binding protein precursor MsmE%2C 420 aa%3B fasta scores: opt: 240 z-score: 249.6 E(): 1.9e-06%3B 25.7%25 identity in 303 aa overlap and to SW:AGLE_RHIME (EMBL:AF045609) Rhizobium meliloti (Sinorhizobium meliloti) alpha-glucosidase-binding periplasmic protein AglE precursor%2C 429 aa%3B fasta scores: opt: 503 Z-score: 522.9 E(): 1.7e-21%3B 35.452%25 identity in 409 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE50.06;product=hypothetical protein;protein_id=NP_627201.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3242997	3243029	.	+	.	ID=id3721;Dbxref=GeneID:1098411;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE50.06
NC_003888.3	RefSeq	sequence_feature	3243426	3244304	.	+	.	ID=id3722;Dbxref=GeneID:1098411;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 68.70%2C E-value 2.8e-18;gbkey=misc_feature;gene=SCE50.06
NC_003888.3	RefSeq	gene	3244399	3245682	.	+	.	ID=gene2994;Dbxref=GeneID:1098412;Name=SCE50.07;gbkey=Gene;gene=SCE50.07;gene_biotype=protein_coding;gene_synonym=SCE50.07;locus_tag=SCO2979
NC_003888.3	RefSeq	CDS	3244399	3245682	.	+	0	ID=cds2939;Parent=gene2994;Dbxref=Genbank:NP_627202.1,GeneID:1098412;Name=NP_627202.1;Note=SCE50.07%2C possible integral membrane transport protein%2C len: 427 aa%3B N-terminal and C-terminal regions both similar to TR:Q55472 (EMBL:D64006) Synechocystis sp. membrane bound sugar transport protein%2C 279 aa%3B fasta scores: opt: 307 z-score: 333.7 E(): 3.8e-11%3B 26.5%25 identity in 412 aa overlap. Contains Pfam match in C-terminal region to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match also in C-terminal region to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains possible N-terminal region signal peptide sequence and also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE50.07;product=integral membrane transport protein;protein_id=NP_627202.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3245338	3245562	.	+	.	ID=id3723;Dbxref=GeneID:1098412;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 55.50%2C E-value 1.2e-12;gbkey=misc_feature;gene=SCE50.07
NC_003888.3	RefSeq	sequence_feature	3245341	3245427	.	+	.	ID=id3724;Dbxref=GeneID:1098412;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCE50.07
NC_003888.3	RefSeq	ribosome_entry_site	3245667	3245671	.	+	.	ID=id3725;Dbxref=GeneID:1098412;gbkey=RBS;gene=SCE50.07
NC_003888.3	RefSeq	gene	3245679	3246596	.	+	.	ID=gene2995;Dbxref=GeneID:1098413;Name=SCE50.08;gbkey=Gene;gene=SCE50.08;gene_biotype=protein_coding;gene_synonym=SCE50.08;locus_tag=SCO2980
NC_003888.3	RefSeq	CDS	3245679	3246596	.	+	0	ID=cds2940;Parent=gene2995;Dbxref=Genbank:NP_627203.1,GeneID:1098413;Name=NP_627203.1;Note=SCE50.08%2C possible integral membrane transport protein%2C len: 305 aa%3B similar to TR:Q55473 (EMBL:D64006) Synechocystis sp. membrane bound sugar transport protein%2C 298 aa%3B fasta scores: opt: 883 z-score: 1001.8 E(): 0%3B 44.5%25 identity in 272 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE50.08;product=integral membrane transport protein;protein_id=NP_627203.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3246249	3246470	.	+	.	ID=id3726;Dbxref=GeneID:1098413;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 50.10%2C E-value 5e-11;gbkey=misc_feature;gene=SCE50.08
NC_003888.3	RefSeq	sequence_feature	3246252	3246338	.	+	.	ID=id3727;Dbxref=GeneID:1098413;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCE50.08
NC_003888.3	RefSeq	stem_loop	3246615	3246649	.	+	.	ID=id3728;Note=12681 TGAGGGGGCGGGCCGGT 12697 12699 ACCGGCCCGCCCCCTCA 12715. Score 51: 17/17 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3246749	3249046	.	+	.	ID=gene2996;Dbxref=GeneID:1098414;Name=SCE50.09;gbkey=Gene;gene=SCE50.09;gene_biotype=protein_coding;gene_synonym=SCE50.09;locus_tag=SCO2981
NC_003888.3	RefSeq	CDS	3246749	3249046	.	+	0	ID=cds2941;Parent=gene2996;Dbxref=Genbank:NP_627204.1,GeneID:1098414;Name=NP_627204.1;Note=SCE50.09%2C possible glycosyl transferase%2C len: 765 aa%3B similar to TR:CAB66267 (EMBL:AL136518) Streptomyces coelicolor  glycosyl transferase (fragment) SCC123.27%2C 743 aa%3B fasta scores: opt: 2334 z-score: 2578.7 E():0%3B 50.4%25 identity in 748 aa overlap and to SW:TAGF_BACSU (EMBL:X15200) Bacillus subtilis teichoic acid biosynthesis protein F%2C TagF%2C 746 aa%3B fasta scores: opt: 319 z-score: 350.8 E(): 4.3e-12%3B 27.9%25 identity in 376 aa overlap. Also similar to Streptomyces coelicolor SCE50.10%2C 736 aa%3B fasta scores: opt: 1837 z-score: 1644.2 E(): 0%3B 45.2%25 identity in 756 aa overlap and SCE50.11%2C 745 aa %3Bfasta scores: opt: 2095 z-score: 1875.1 E(): 0%3B 49.0%25 identity in 764 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=SCE50.09;product=glycosyl transferase;protein_id=NP_627204.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3246773	3247288	.	+	.	ID=id3729;Dbxref=GeneID:1098414;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 93.50%2C E-value 4.1e-24;gbkey=misc_feature;gene=SCE50.09
NC_003888.3	RefSeq	gene	3249066	3251276	.	+	.	ID=gene2997;Dbxref=GeneID:1098415;Name=SCE50.10;gbkey=Gene;gene=SCE50.10;gene_biotype=protein_coding;gene_synonym=SCE50.10;locus_tag=SCO2982
NC_003888.3	RefSeq	CDS	3249066	3251276	.	+	0	ID=cds2942;Parent=gene2997;Dbxref=Genbank:NP_627205.1,GeneID:1098415;Name=NP_627205.1;Note=SCE50.10%2C possible glycosyl transferase%2C len: 736 aa%3B similar to TR:CAB66267 (EMBL:AL136518) Streptomyces coelicolor  glycosyl transferase (fragment) SCC123.27%2C 743 aa%3B fasta scores: opt: 2115 z-score: 2498.8 E():0%3B 47.9%25 identity in 746 aa overlap and to SW:TAGF_BACSU (EMBL:X15200) Bacillus subtilis teichoic acid biosynthesis protein F%2C TagF%2C 746 aa%3B fasta scores: opt: 465 z-score: 545.7 E(): 6e-23%3B 30.9%25 identity in 376 aa overlap. Also similar to Streptomyces coelicolor SCE50.09%2C 765 aa%3B fasta scores: opt: 1837 z-score: 1731.8 E(): 0%3B 44.8%25 identity in 754 aa overlap and SCE50.11%2C 745 aa%3B fasta scores: opt: 1407 z-score: 1326.5 E(): 0%3B 43.7%25 identity in 746 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=SCE50.10;product=glycosyl transferase;protein_id=NP_627205.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3249078	3249698	.	+	.	ID=id3730;Dbxref=GeneID:1098415;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 25.80%2C E-value 0.001;gbkey=misc_feature;gene=SCE50.10
NC_003888.3	RefSeq	ribosome_entry_site	3251267	3251272	.	+	.	ID=id3731;Dbxref=GeneID:1098415;gbkey=RBS;gene=SCE50.10
NC_003888.3	RefSeq	gene	3251284	3253521	.	+	.	ID=gene2998;Dbxref=GeneID:1098416;Name=SCE50.11;gbkey=Gene;gene=SCE50.11;gene_biotype=protein_coding;gene_synonym=SCE50.11;locus_tag=SCO2983
NC_003888.3	RefSeq	CDS	3251284	3253521	.	+	0	ID=cds2943;Parent=gene2998;Dbxref=Genbank:NP_627206.1,GeneID:1098416;Name=NP_627206.1;Note=SCE50.11%2C possible glycosyl transferase%2C len: 745 aa%3B similar to TR:CAB66267 (EMBL:AL136518) Streptomyces coelicolor  glycosyl transferase (fragment) SCC123.27%2C 743 aa%3B fasta scores: opt: 2355 z-score: 2721.3 E(): 0%3B 51.2%25 identity in 732 aa overla and to SW:TAGF_BACSU (EMBL:X15200) Bacillus subtilis teichoic acid biosynthesis protein F%2C TagF%2C 746 aa%3B fasta scores: opt: 553 z-score: 636.4 E(): 5.3e-28%3B 28.2%25 identity in 432 aa overlap. Also similar to Streptomyces coelicolor SCE50.09%2C 765 aa%3B fasta scores: opt: 2095 z-score: 1969.9 E(): 0%3B 48.7%25 identity in 764 aa overlap and SCE50.10%2C 736 aa%3B fasta scores: opt: 1407 z-score: 1323.0 E(): 0%3B 43.7%25 identity in 746 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=SCE50.11;product=glycosyl transferase;protein_id=NP_627206.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3251296	3251784	.	+	.	ID=id3732;Dbxref=GeneID:1098416;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 87.90%2C E-value 2.1e-22;gbkey=misc_feature;gene=SCE50.11
NC_003888.3	RefSeq	gene	3253518	3254849	.	+	.	ID=gene2999;Dbxref=GeneID:1098417;Name=SCE50.12;gbkey=Gene;gene=SCE50.12;gene_biotype=protein_coding;gene_synonym=SCE50.12;locus_tag=SCO2984
NC_003888.3	RefSeq	CDS	3253518	3254849	.	+	0	ID=cds2944;Parent=gene2999;Dbxref=Genbank:NP_627207.1,GeneID:1098417;Name=NP_627207.1;Note=SCE50.12%2C possible integral membrane protein%2C len: 443 aa. Contains possible hydrophobic membrane spanning regions and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE50.12;product=hypothetical protein;protein_id=NP_627207.1;transl_table=11
NC_003888.3	RefSeq	gene	3254989	3256542	.	+	.	ID=gene3000;Dbxref=GeneID:1098418;Name=SCE50.13;gbkey=Gene;gene=SCE50.13;gene_biotype=protein_coding;gene_synonym=SCE50.13;locus_tag=SCO2985
NC_003888.3	RefSeq	CDS	3254989	3256542	.	+	0	ID=cds2945;Parent=gene3000;Dbxref=Genbank:NP_627208.1,GeneID:1098418;Name=NP_627208.1;Note=SCE50.13 possible integral membrane protein%2C len: 517 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE50.13;product=hypothetical protein;protein_id=NP_627208.1;transl_table=11
NC_003888.3	RefSeq	gene	3256564	3256977	.	-	.	ID=gene3001;Dbxref=GeneID:1098419;Name=SCE50.14c;gbkey=Gene;gene=SCE50.14c;gene_biotype=protein_coding;gene_synonym=SCE50.14c;locus_tag=SCO2986
NC_003888.3	RefSeq	CDS	3256564	3256977	.	-	0	ID=cds2946;Parent=gene3001;Dbxref=Genbank:NP_627209.1,GeneID:1098419;Name=NP_627209.1;Note=SCE50.14c%2C hypothetical protein%2C len: 137 aa%3B similar to TR:CAB62728 (EMBL:AL133423) Streptomyces coelicolor hypothetical 14.2 kD protein SC4A7.24c%2C 139 aa%3B fasta scores: opt: 533 z-score: 620.7 E(): 4e-27%3B 60.9%25 identity in 133 aa overlap;gbkey=CDS;gene=SCE50.14c;product=hypothetical protein;protein_id=NP_627209.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3257109	3257112	.	+	.	ID=id3733;gbkey=RBS
NC_003888.3	RefSeq	gene	3257116	3257622	.	+	.	ID=gene3002;Dbxref=GeneID:1098420;Name=SCE50.15;gbkey=Gene;gene=SCE50.15;gene_biotype=protein_coding;gene_synonym=SCE50.15;locus_tag=SCO2987
NC_003888.3	RefSeq	CDS	3257116	3257622	.	+	0	ID=cds2947;Parent=gene3002;Dbxref=Genbank:NP_627210.1,GeneID:1098420;Name=NP_627210.1;Note=SCE50.15%2C possible regulatory protein%2C len: 168 aa%3B similar to SW:HPCR_ECOLI (EMBL:S56952) Escherichia coli homoprotocatechuate degradative operon repressor HpcR%2C 148 aa%3B fasta scores: opt: 151 z-score: 195.2 E(): 0.002%3B 27.9%25 identity in 136 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SCE50.15;product=regulatory protein;protein_id=NP_627210.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3257266	3257571	.	+	.	ID=id3734;Dbxref=GeneID:1098420;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 96.20%2C E-value 6.6e-25;gbkey=misc_feature;gene=SCE50.15
NC_003888.3	RefSeq	gene	3257700	3258680	.	+	.	ID=gene3003;Dbxref=GeneID:1098421;Name=galE2;gbkey=Gene;gene=galE2;gene_biotype=protein_coding;gene_synonym=galE2,SCE50.16;locus_tag=SCO2988
NC_003888.3	RefSeq	CDS	3257700	3258680	.	+	0	ID=cds2948;Parent=gene3003;Dbxref=Genbank:NP_627211.1,GeneID:1098421;Name=NP_627211.1;Note=SCE50.16%2C galE2%2C UDP-glucose 4-epimerase%2C len: 326 aa%3B highly similar to SW:EXOB_AZOBR (EMBL:Z25478) Azospirillum brasilense UDP-glucose 4-epimerase (EC 5.1.3.2) ExoB%2C 348 aa%3B fasta scores: opt: 885 z-score: 970.7 E(): 0%3B 46.4%25 identity in 319 aa overlap and to SW:GALE_STRLI (EMBL:M18953) Streptomyces lividans UDP-glucose 4-epimerase (EC 5.1.3.2) GalE%2C 329 aa%3B fasta scores: opt: 793 z-score: 870.9 E(): 0%3B42.7%25 identity in 328 aa overlap. Contains Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family;gbkey=CDS;gene=galE2;product=UDP-glucose 4-epimerase;protein_id=NP_627211.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3257706	3258662	.	+	.	ID=id3735;Dbxref=GeneID:1098421;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 363.30%2C E-value 2.5e-105;gbkey=misc_feature;gene=galE2
NC_003888.3	RefSeq	gene	3258693	3259130	.	-	.	ID=gene3004;Dbxref=GeneID:1098422;Name=SCE50.17c;gbkey=Gene;gene=SCE50.17c;gene_biotype=protein_coding;gene_synonym=SCE50.17c;locus_tag=SCO2989
NC_003888.3	RefSeq	CDS	3258693	3259130	.	-	0	ID=cds2949;Parent=gene3004;Dbxref=Genbank:NP_627212.1,GeneID:1098422;Name=NP_627212.1;Note=SCE50.17c%2C possible integral membrane protein%2C len: 145 aa%3B similar to TR:Q9X8C2 (EMBL:AL049763) Streptomyces coelicolor hypothetical 13.0 kD protein SCE36.09%2C 114 aa%3B fasta scores: opt: 256 z-score: 321.6 E(): 1.8e-10%3B 53.5%25 identity in 71 aa overlap. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE50.17c;product=hypothetical protein;protein_id=NP_627212.1;transl_table=11
NC_003888.3	RefSeq	gene	3259127	3259738	.	-	.	ID=gene3005;Dbxref=GeneID:1098423;Name=SCE50.18c;gbkey=Gene;gene=SCE50.18c;gene_biotype=protein_coding;gene_synonym=SCE50.18c;locus_tag=SCO2990
NC_003888.3	RefSeq	CDS	3259127	3259738	.	-	0	ID=cds2950;Parent=gene3005;Dbxref=Genbank:NP_627213.1,GeneID:1098423;Name=NP_627213.1;Note=SCE50.18c%2C hypothetical protein%2C len: 203 aa%3B similar to TR:Q9Z552 (EMBL:AL03521) Streptomyces coelicolor hypothetical 17.8 kD protein%2C 162 aa%3B fasta scores: opt: 203 z-score: 257.9 E(): 6.4e-07%3B 29.7%25 identity in 165 aa overlap and to TR:Q9AK06 (EMBL:AL512944) Streptomyces coelicolor hypothetical protein SC8D11.13%2C 194 aa%3B fasta scores: opt: 588 Z-score: 704.3 E(): 1.4e-31%3B 49.735%25 identity in 189 aa overlap;gbkey=CDS;gene=SCE50.18c;product=hypothetical protein;protein_id=NP_627213.1;transl_table=11
NC_003888.3	RefSeq	gene	3259735	3260538	.	-	.	ID=gene3006;Dbxref=GeneID:1098424;Name=SCE50.19c;gbkey=Gene;gene=SCE50.19c;gene_biotype=protein_coding;gene_synonym=SCE50.19c;locus_tag=SCO2991
NC_003888.3	RefSeq	CDS	3259735	3260538	.	-	0	ID=cds2951;Parent=gene3006;Dbxref=Genbank:NP_627214.1,GeneID:1098424;Name=NP_627214.1;Note=SCE50.19c%2C unknown%2C len: 267 aa;gbkey=CDS;gene=SCE50.19c;product=hypothetical protein;protein_id=NP_627214.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3259747	3259750	.	-	.	ID=id3736;Dbxref=GeneID:1098424;gbkey=RBS;gene=SCE50.19c
NC_003888.3	RefSeq	gene	3260554	3261048	.	-	.	ID=gene3007;Dbxref=GeneID:1098425;Name=SCE50.20c;gbkey=Gene;gene=SCE50.20c;gene_biotype=protein_coding;gene_synonym=SCE50.20c;locus_tag=SCO2992
NC_003888.3	RefSeq	CDS	3260554	3261048	.	-	0	ID=cds2952;Parent=gene3007;Dbxref=Genbank:NP_627215.1,GeneID:1098425;Name=NP_627215.1;Note=SCE50.20c%2C probable acetyltransferase%2C len: 164 aa%3B similar to TR:O66161 (EMBL:AB005901) Streptomyces kasugaensis kasugamycin acetyltransferase KAC338%2C 141 aa%3B fasta scores: opt: 756 z-score: 933.2 E(): 0%3B 76.8%25 identity in 142 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCE50.20c;product=acetyltransferase;protein_id=NP_627215.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3260584	3260943	.	-	.	ID=id3737;Dbxref=GeneID:1098425;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 19.00%2C E-value 0.016;gbkey=misc_feature;gene=SCE50.20c
NC_003888.3	RefSeq	gene	3261047	3261601	.	+	.	ID=gene3008;Dbxref=GeneID:1098426;Name=SCE50.21;gbkey=Gene;gene=SCE50.21;gene_biotype=protein_coding;gene_synonym=SCE50.21;locus_tag=SCO2993
NC_003888.3	RefSeq	CDS	3261047	3261601	.	+	0	ID=cds2953;Parent=gene3008;Dbxref=Genbank:NP_627216.1,GeneID:1098426;Name=NP_627216.1;Note=SCE50.21%2C unknown%2C len: 184 aa;gbkey=CDS;gene=SCE50.21;product=hypothetical protein;protein_id=NP_627216.1;transl_table=11
NC_003888.3	RefSeq	gene	3261649	3262339	.	-	.	ID=gene3009;Dbxref=GeneID:1098427;Name=SCE99.01c;gbkey=Gene;gene=SCE99.01c;gene_biotype=protein_coding;gene_synonym=SCE99.01c;locus_tag=SCO2994
NC_003888.3	RefSeq	CDS	3261649	3262339	.	-	0	ID=cds2954;Parent=gene3009;Dbxref=Genbank:NP_627217.2,GeneID:1098427;Name=NP_627217.2;Note=SCE99.01c%2C probable tetR-family transcriptional regulator (fragment)%2C len: >230 aa%3B similar to TR:Q54288 (EMBL:X86780) Streptomyces hygroscopicus regulator of antibiotic transport complexes ORFY%2C 204 aa%3B fasta scores: opt: 427 z-score: 493.1 E(): 6.3e-20%3B 45.5%25 identity in 167 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif at residues 71..92 (+4.56 SD);end_range=3262339,.;gbkey=CDS;gene=SCE99.01c;partial=true;product=TetR family transcriptional regulator;protein_id=NP_627217.2;start_range=.,3261649;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3262037	3262177	.	-	.	ID=id3738;Dbxref=GeneID:1098427;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.50%2C E-value 3.9e-10;gbkey=misc_feature;gene=SCE99.01c
NC_003888.3	RefSeq	gene	3262446	3263402	.	+	.	ID=gene3010;Dbxref=GeneID:1098428;Name=SCE99.02;gbkey=Gene;gene=SCE99.02;gene_biotype=protein_coding;gene_synonym=SCE99.02;locus_tag=SCO2995
NC_003888.3	RefSeq	CDS	3262446	3263402	.	+	0	ID=cds2955;Parent=gene3010;Dbxref=Genbank:NP_627218.1,GeneID:1098428;Name=NP_627218.1;Note=SCE99.02%2C possible ABC transporter integral membrane protein%2C len: 318 aa%3B similar to TR:Q9X7V2 (EMBL:AL049485) Streptomyces coelicolor ABC transporter membrane component SC6A5.06%2C 309 aa%3B fasta scores: opt: 1393 z-score: 1546.8 E(): 0%3B 69.0%25 identity in 300 aa overlap and to SW:RFA1_KLEPN (EMBL:L31775) Klebsiella pneumoniae O-antigen export system permease RfbA%2C 259 aa%3B fasta scores: opt: 327 z-score: 370.8 E(): 4.1e-13%3B 26.6%25 identity in 199 aa overlap. Contains Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE99.02;product=ABC transporter;protein_id=NP_627218.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3262605	3263393	.	+	.	ID=id3739;Dbxref=GeneID:1098428;Note=Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter%2C score 149.70%2C E-value 5.2e-41;gbkey=misc_feature;gene=SCE99.02
NC_003888.3	RefSeq	gene	3263440	3264306	.	+	.	ID=gene3011;Dbxref=GeneID:1098429;Name=SCE99.03;gbkey=Gene;gene=SCE99.03;gene_biotype=protein_coding;gene_synonym=SCE99.03;locus_tag=SCO2996
NC_003888.3	RefSeq	CDS	3263440	3264306	.	+	0	ID=cds2956;Parent=gene3011;Dbxref=Genbank:NP_627219.1,GeneID:1098429;Name=NP_627219.1;Note=SCE99.03%2C possible ABC transporter ATP-binding protein%2C len: 288 aa%3B similar to SW:RFB1_KLEPN (EMBL:L31775) Klebsiella pneumoniae O-antigen export system ATP-binding protein RfbB%2C 246 aa%3B fasta scores: opt: 550 z-score: 504.2 E(): 1.5e-20%3B 40.2%25 identity in 209 aa overlap and to TR:Q9X7V3 (EMBL:AL049085) Streptomyces coelicolor ABC transporter ATP-binding component SC6A5.07%2C 253 aa%3B fasta scores: opt: 1381 z-score: 963.7 E(): 0%3B 82.5%25 identity in 251 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCE99.03;product=ABC transporter ATP-binding protein;protein_id=NP_627219.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3263617	3264135	.	+	.	ID=id3740;Dbxref=GeneID:1098429;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 116.40%2C E-value 5.2e-31;gbkey=misc_feature;gene=SCE99.03
NC_003888.3	RefSeq	sequence_feature	3263638	3263661	.	+	.	ID=id3741;Dbxref=GeneID:1098429;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE99.03
NC_003888.3	RefSeq	sequence_feature	3263908	3263952	.	+	.	ID=id3742;Dbxref=GeneID:1098429;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE99.03
NC_003888.3	RefSeq	sequence_feature	3264199	3264300	.	+	.	ID=id3743;Dbxref=GeneID:1098429;Note=High G+C content region (84.31%25). Also high content in alanine ad proline amino acid residues;gbkey=misc_feature;gene=SCE99.03
NC_003888.3	RefSeq	ribosome_entry_site	3264421	3264426	.	+	.	ID=id3744;gbkey=RBS
NC_003888.3	RefSeq	gene	3264435	3266675	.	+	.	ID=gene3012;Dbxref=GeneID:1098430;Name=SCE99.04;gbkey=Gene;gene=SCE99.04;gene_biotype=protein_coding;gene_synonym=SCE99.04;locus_tag=SCO2997
NC_003888.3	RefSeq	CDS	3264435	3266675	.	+	0	ID=cds2957;Parent=gene3012;Dbxref=Genbank:NP_627220.1,GeneID:1098430;Name=NP_627220.1;Note=SCE99.04%2C possible transferase%2C len: 746 aa%3B similar to TR:Q9L053 (EMBL:AL163672) Streptomyces coelicolor glycosyl transferase SCE50.10%2C 736 aa%3B fasta scores: opt: 1826 z-score: 2036.2 E(): 0%3B 46.9%25 identity in 749 aa overlap;gbkey=CDS;gene=SCE99.04;product=transferase;protein_id=NP_627220.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3264645	3264698	.	+	.	ID=id3745;Dbxref=GeneID:1098430;Note=High G+C content (88.88%25). Also high content in alanine%2C arginine and glycine amino acid residues;gbkey=misc_feature;gene=SCE99.04
NC_003888.3	RefSeq	ribosome_entry_site	3266656	3266661	.	+	.	ID=id3746;Dbxref=GeneID:1098430;gbkey=RBS;gene=SCE99.04
NC_003888.3	RefSeq	gene	3266672	3268393	.	+	.	ID=gene3013;Dbxref=GeneID:1098431;Name=SCE99.05;gbkey=Gene;gene=SCE99.05;gene_biotype=protein_coding;gene_synonym=SCE99.05;locus_tag=SCO2998
NC_003888.3	RefSeq	CDS	3266672	3268393	.	+	0	ID=cds2958;Parent=gene3013;Dbxref=Genbank:NP_627221.1,GeneID:1098431;Name=NP_627221.1;Note=SCE99.05%2C possible transferase%2C len: 573 aa%3B N-terminal domain similar to TR:AAG01876 (EMBL:AF292031) Mesorhizobium huakuii glucosyltransferase Exo1%2C 340 aa%3B fasta scores: opt: 312 z-score: 366.8 E(): 6.8e-13%3B 30.3%25 identity in 337 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=SCE99.05;product=transferase;protein_id=NP_627221.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3266744	3267250	.	+	.	ID=id3747;Dbxref=GeneID:1098431;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 109.10%2C E-value 8.5e-29;gbkey=misc_feature;gene=SCE99.05
NC_003888.3	RefSeq	gene	3268611	3273572	.	-	.	ID=gene3014;Dbxref=GeneID:1098432;Name=SCE33.01c;gbkey=Gene;gene=SCE33.01c;gene_biotype=protein_coding;gene_synonym=SCE33.01c,SCE99.06c;locus_tag=SCO2999
NC_003888.3	RefSeq	CDS	3268611	3273572	.	-	0	ID=cds2959;Parent=gene3014;Dbxref=Genbank:NP_733589.1,GeneID:1098432;Name=NP_733589.1;Note=SCE33.01c%2C hypothetical protein (fragment)%2C len: >187 aa%3B similar to TR:Q9X7B2 (EMBL:AL049913) Mycobacterium leprae hypothetical 177.9 kD protein MCLB1610.10%2C 1622 aa%3B fasta scores: opt: 154 z-score: 172.5 E(): 0.038%3B 29.7%25 identity in 155 aa overlap~SCE99.06c%2C conserved hypothetical protein (fragment)%2C len: >1515 aa%3B similar to TR:AAG06456 (EMBL:AE004731) Pseudomonas aeruginosa conserved hypothetical protein PA3068%2C 1620 aa%3B fasta scores: opt: 4170 z-score: 4589.7 E(): 0%3B 46.3%25 identity in 1521 aa overlap;gbkey=CDS;gene=SCE33.01c;product=hypothetical protein;protein_id=NP_733589.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3273575	3273579	.	-	.	ID=id3748;gbkey=RBS
NC_003888.3	RefSeq	gene	3274075	3274746	.	-	.	ID=gene3015;Dbxref=GeneID:1098433;Name=SCE33.02c;gbkey=Gene;gene=SCE33.02c;gene_biotype=protein_coding;gene_synonym=SCE33.02c;locus_tag=SCO3000
NC_003888.3	RefSeq	CDS	3274075	3274746	.	-	0	ID=cds2960;Parent=gene3015;Dbxref=Genbank:NP_627222.1,GeneID:1098433;Name=NP_627222.1;Note=SCE33.02c%2C possible phosphatase%2C len: 223 aa%3B similar to TR:AAF42165 (EMBL:AE002532) Neisseria meningitidis phosphoglycolate phosphatase%2C NMB1830%2C 219 aa%3B fasta scores: opt: 221 z-score: 270.1 E(): 1.4e-07%3B 28.4%25 identity in 218 aa overlap and to SW:GPH_RHOCA (EMBL:U23145) Rhodobacter capsulatus phosphoglycolate phosphatase (EC 3.1.3.18) CbbZ%2C 219 aa%3B fasta scores: opt: 158 z-score: 196.2 E(): 0.0018%3B 25.4%25 identity in 189 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=SCE33.02c;product=phosphatase;protein_id=NP_627222.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3274168	3274731	.	-	.	ID=id3749;Dbxref=GeneID:1098433;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 18.60%2C E-value 0.00019;gbkey=misc_feature;gene=SCE33.02c
NC_003888.3	RefSeq	gene	3274805	3275308	.	-	.	ID=gene3016;Dbxref=GeneID:1098434;Name=SCE33.03c;gbkey=Gene;gene=SCE33.03c;gene_biotype=protein_coding;gene_synonym=SCE33.03c;locus_tag=SCO3001
NC_003888.3	RefSeq	CDS	3274805	3275308	.	-	0	ID=cds2961;Parent=gene3016;Dbxref=Genbank:NP_627223.1,GeneID:1098434;Name=NP_627223.1;Note=SCE33.03c%2C hypothetical protein%2C len: 167 aa%3B similar to TR:O0587 (EMBL:Z95121) Mycobacterium tuberculosis hypothetical 17.8 kD protein MTCY20B11.06c%2C 169 aa%3B fasta scores: opt: 415 z-score: 473.1 E(): 6.8e-19%3B 49.1%25 identity in 171 aa overlap;gbkey=CDS;gene=SCE33.03c;product=hypothetical protein;protein_id=NP_627223.1;transl_table=11
NC_003888.3	RefSeq	gene	3275287	3275574	.	-	.	ID=gene3017;Dbxref=GeneID:1098435;Name=SCE33.04c;gbkey=Gene;gene=SCE33.04c;gene_biotype=protein_coding;gene_synonym=SCE33.04c;locus_tag=SCO3002
NC_003888.3	RefSeq	CDS	3275287	3275574	.	-	0	ID=cds2962;Parent=gene3017;Dbxref=Genbank:NP_627224.1,GeneID:1098435;Name=NP_627224.1;Note=SCE33.04c%2C unknown%2C len: 95 aa;gbkey=CDS;gene=SCE33.04c;product=hypothetical protein;protein_id=NP_627224.1;transl_table=11
NC_003888.3	RefSeq	gene	3275599	3275946	.	-	.	ID=gene3018;Dbxref=GeneID:1098436;Name=SCE33.05c;gbkey=Gene;gene=SCE33.05c;gene_biotype=protein_coding;gene_synonym=SCE33.05c;locus_tag=SCO3003
NC_003888.3	RefSeq	CDS	3275599	3275946	.	-	0	ID=cds2963;Parent=gene3018;Dbxref=Genbank:NP_627225.1,GeneID:1098436;Name=NP_627225.1;Note=SCE33.05c%2C unknown%2C len: 115 aa. High content in glycine and proline amino acid residues and also high %25 G+C (80.57%25);gbkey=CDS;gene=SCE33.05c;product=hypothetical protein;protein_id=NP_627225.1;transl_table=11
NC_003888.3	RefSeq	gene	3276479	3276748	.	+	.	ID=gene3019;Dbxref=GeneID:1098437;Name=SCE33.06;gbkey=Gene;gene=SCE33.06;gene_biotype=protein_coding;gene_synonym=SCE33.06;locus_tag=SCO3004
NC_003888.3	RefSeq	CDS	3276479	3276748	.	+	0	ID=cds2964;Parent=gene3019;Dbxref=Genbank:NP_627226.1,GeneID:1098437;Name=NP_627226.1;Note=SCE33.06%2C unknown%2C len: 89 aa. High content in arginine amino acid residues and also high %25 G+C (77.4%25);gbkey=CDS;gene=SCE33.06;product=hypothetical protein;protein_id=NP_627226.1;transl_table=11
NC_003888.3	RefSeq	gene	3276877	3279720	.	-	.	ID=gene3020;Dbxref=GeneID:1098438;Name=azi;gbkey=Gene;gene=azi;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=SCO3005
NC_003888.3	RefSeq	CDS	3276877	3279720	.	-	0	ID=cds2965;Parent=gene3020;Dbxref=Genbank:NP_627227.1,GeneID:1098438;Name=NP_627227.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=azi;product=preprotein translocase subunit SecA;protein_id=NP_627227.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3278170	3278217	.	-	.	ID=id3750;Dbxref=GeneID:1098438;Note=PS01312 Protein secA signatures;gbkey=misc_feature;gene=azi
NC_003888.3	RefSeq	sequence_feature	3278401	3279711	.	-	.	ID=id3751;Dbxref=GeneID:1098438;Note=Pfam match to entry PF01043 SecA_protein%2C SecA protein%2C amino terminal region%2C score 1076.90%2C E-value 0;gbkey=misc_feature;gene=azi
NC_003888.3	RefSeq	ribosome_entry_site	3279730	3279735	.	-	.	ID=id3752;gbkey=RBS
NC_003888.3	RefSeq	gene	3280002	3280577	.	+	.	ID=gene3021;Dbxref=GeneID:1098439;Name=SCE33.08;gbkey=Gene;gene=SCE33.08;gene_biotype=protein_coding;gene_synonym=SCE33.08;locus_tag=SCO3006
NC_003888.3	RefSeq	CDS	3280002	3280577	.	+	0	ID=cds2966;Parent=gene3021;Dbxref=Genbank:NP_627228.1,GeneID:1098439;Name=NP_627228.1;Note=SCE33.08%2C possible acetyltransferase%2C len: 191 aa%3B similar to TR:Q9Z576 (EMBL:AL035569) Streptomyces coelicolor  acetyltransferase SC8D9.15%2C 194 aa%3B fasta scores: opt: 212 z-score: 283.0 E(): 2.6e-08%3B 40.5%25 identity in 84 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE33.08;product=acetyltransferase;protein_id=NP_627228.1;transl_table=11
NC_003888.3	RefSeq	gene	3280662	3281837	.	+	.	ID=gene3022;Dbxref=GeneID:1098440;Name=SCE33.09;gbkey=Gene;gene=SCE33.09;gene_biotype=protein_coding;gene_synonym=SCE33.09;locus_tag=SCO3007
NC_003888.3	RefSeq	CDS	3280662	3281837	.	+	0	ID=cds2967;Parent=gene3022;Dbxref=Genbank:NP_627229.1,GeneID:1098440;Name=NP_627229.1;Note=SCE33.09%2C hypothetical protein%2C len: 391 aa%3B similar to TR:AAF11622 (EMBL:AE002043) Deinococcus radiodurans conserved hypothetical protein DR2072%2C 360 aa%3B fasta scores: opt: 300 z-score: 355.4 E(): 2.5e-12%3B 30.1%25 identity in 362 aa overlap and to TR:Q9HZZ9 (EMBL:AE004711) Pseudomonas aeruginosa hypothetical protein PA2844%2C 402 aa%3B fasta scores: opt: 629 Z-score: 729.7 E(): 5.2e-33%3B 40.415%25 identity in 386 aa overlap;gbkey=CDS;gene=SCE33.09;product=hypothetical protein;protein_id=NP_627229.1;transl_table=11
NC_003888.3	RefSeq	gene	3281872	3282630	.	-	.	ID=gene3023;Dbxref=GeneID:1098441;Name=SCE33.10c;gbkey=Gene;gene=SCE33.10c;gene_biotype=protein_coding;gene_synonym=SCE33.10c;locus_tag=SCO3008
NC_003888.3	RefSeq	CDS	3281872	3282630	.	-	0	ID=cds2968;Parent=gene3023;Dbxref=Genbank:NP_627230.1,GeneID:1098441;Name=NP_627230.1;Note=SCE33.10c%2C probable two-component system response regulator%2C len: 252 aa%3B similar to TR:AAF10563 (EMBL:AE001951) Deinococcus radiodurans DNA-binding response regulator DR0987%2C 239 aa%3B fasta scores: opt: 576 z-score: 658.2 E(): 3.3e-29%3B 44.0%25 identity in 218 aa overlap and to various Streptomyces coelicolor two-component response regulators%2C e.g. TR:CAB59507 (EMBL:AL132648) SCI41.37%2C 223 aa%3B fasta scores: opt: 622 z-score: 571.0 E(): 2.8e-26%3B 47.2%25 identity in 214 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Contains also possible helix-turn-helix motif at residues 204..225 (+5.13 SD);gbkey=CDS;gene=SCE33.10c;product=two-component system response regulator;protein_id=NP_627230.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3281878	3282075	.	-	.	ID=id3753;Dbxref=GeneID:1098441;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 104.30%2C E-value 2.3e-27;gbkey=misc_feature;gene=SCE33.10c
NC_003888.3	RefSeq	sequence_feature	3281941	3282024	.	-	.	ID=id3754;Dbxref=GeneID:1098441;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCE33.10c
NC_003888.3	RefSeq	sequence_feature	3282184	3282525	.	-	.	ID=id3755;Dbxref=GeneID:1098441;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 131.20%2C E-value 1.9e-35;gbkey=misc_feature;gene=SCE33.10c
NC_003888.3	RefSeq	ribosome_entry_site	3282634	3282639	.	-	.	ID=id3756;gbkey=RBS
NC_003888.3	RefSeq	gene	3282859	3283623	.	-	.	ID=gene3024;Dbxref=GeneID:1098442;Name=SCE33.11c;gbkey=Gene;gene=SCE33.11c;gene_biotype=protein_coding;gene_synonym=SCE33.11c;locus_tag=SCO3009
NC_003888.3	RefSeq	CDS	3282859	3283623	.	-	0	ID=cds2969;Parent=gene3024;Dbxref=Genbank:NP_627231.1,GeneID:1098442;Name=NP_627231.1;Note=SCE33.11c%2C hypothetical protein%2C len: 254 aa%3B similar to TR:O05886 (EMBL:Z95121) Mycobacterium tuberculosis hypothetical 24.5 kD protein MTCY20B11.16c%2C 214 aa%3B fasta scores: opt: 487 z-score: 551.0 E(): 3.1e-23%3B 47.6%25 identity in 210 aa overlap;gbkey=CDS;gene=SCE33.11c;product=hypothetical protein;protein_id=NP_627231.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3283631	3283634	.	-	.	ID=id3757;gbkey=RBS
NC_003888.3	RefSeq	gene	3283865	3284812	.	-	.	ID=gene3025;Dbxref=GeneID:1098443;Name=SCE33.12c;gbkey=Gene;gene=SCE33.12c;gene_biotype=protein_coding;gene_synonym=SCE33.12c;locus_tag=SCO3010
NC_003888.3	RefSeq	CDS	3283865	3284812	.	-	0	ID=cds2970;Parent=gene3025;Dbxref=Genbank:NP_627232.1,GeneID:1098443;Name=NP_627232.1;Note=SCE33.12c%2C hypothetical protein%2C len: 315 aa%3B similar to TR:O05887 (EMBL:Z95121) hypothetical 22.5 kD protein MTCY20B11.17c%2C 213 aa%3B fasta scores: opt: 189 z-score: 191.8 E(): 0.0032%3B 36.8%25 identity in 228 aa overlap;gbkey=CDS;gene=SCE33.12c;product=hypothetical protein;protein_id=NP_627232.1;transl_table=11
NC_003888.3	RefSeq	gene	3284985	3286832	.	-	.	ID=gene3026;Dbxref=GeneID:1098444;Name=SCE33.13c;gbkey=Gene;gene=SCE33.13c;gene_biotype=protein_coding;gene_synonym=SCE33.13c;locus_tag=SCO3011
NC_003888.3	RefSeq	CDS	3284985	3286832	.	-	0	ID=cds2971;Parent=gene3026;Dbxref=Genbank:NP_627233.1,GeneID:1098444;Name=NP_627233.1;Note=SCE33.13c%2C possible lipoprotein%2C len: 615 aa%3B similar to TR:O05889 (EMBL:Z95121) Mycobacterium tuberculosis hypothetical 61.2 kD protein MTCY20B11.19c%2C 583 aa%3B fasta scores: opt: 228 z-score: 243.7 E(): 4.1e-06%3B 25.5%25 identity in 624 aa overlap. Contains properly located match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE33.13c;product=lipoprotein LpqB;protein_id=NP_627233.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3286743	3286775	.	-	.	ID=id3758;Dbxref=GeneID:1098444;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE33.13c
NC_003888.3	RefSeq	gene	3286822	3288888	.	-	.	ID=gene3027;Dbxref=GeneID:1098445;Name=SCE33.14c;gbkey=Gene;gene=SCE33.14c;gene_biotype=protein_coding;gene_synonym=SCE33.14c;locus_tag=SCO3012
NC_003888.3	RefSeq	CDS	3286822	3288888	.	-	0	ID=cds2972;Parent=gene3027;Dbxref=Genbank:NP_627234.1,GeneID:1098445;Name=NP_627234.1;Note=SCE33.14c%2C probable two-component system histidine kinase%2C len: 688 aa%3B similar to TR:O05890 (EMBL:Z95121) Mycobacterium tuberculosis MtrB%2C 567 aa%3B fasta scores: opt: 1355 z-score: 1302.5 E(): 0%3B 48.9%25 identity in 515 aa overlap and to SW:AFQ2_STRCO (EMBL:D10654) Streptomyces coelicolor sensor protein AfsQ2 (EC 2.7.3.-) fasta scores: opt: 560 z-score: 542.0 E(): 9.8e-23%3B 31.1%25 identity in 460 aa overlap. Contains Pfam matches to entries PF00672 DUF5%2C Domain found in bacterial signal proteins and PF00512 signal%2C Histidine kinase. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE33.14c;product=two-component system histidine kinase;protein_id=NP_627234.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3286839	3286843	.	-	.	ID=id3759;Dbxref=GeneID:1098445;gbkey=RBS;gene=SCE33.14c
NC_003888.3	RefSeq	sequence_feature	3287194	3287829	.	-	.	ID=id3760;Dbxref=GeneID:1098445;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 186.40%2C E-value 4.4e-52;gbkey=misc_feature;gene=SCE33.14c
NC_003888.3	RefSeq	sequence_feature	3287890	3288099	.	-	.	ID=id3761;Dbxref=GeneID:1098445;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 52.10%2C E-value 1.2e-11;gbkey=misc_feature;gene=SCE33.14c
NC_003888.3	RefSeq	gene	3288890	3289579	.	-	.	ID=gene3028;Dbxref=GeneID:1098446;Name=SCE33.15c;gbkey=Gene;gene=SCE33.15c;gene_biotype=protein_coding;gene_synonym=SCE33.15c;locus_tag=SCO3013
NC_003888.3	RefSeq	CDS	3288890	3289579	.	-	0	ID=cds2973;Parent=gene3028;Dbxref=Genbank:NP_627235.1,GeneID:1098446;Name=NP_627235.1;Note=SCE33.15c%2C probable two-component system response regulator%2C len: 229 aa%3B similar to TR:Q50447 (EMBL:Z95121) Mycobacterium tuberculosis MtrA%2C 228 aa%3B fasta scores: opt: 1141 z-score: 1397.7 E(): 0%3B 74.9%25 identity in 227 aa overlap%2C to SW:AFQ1_STRCO (EMBL:D10654) Streptomyces coelicolor transcriptional regulatory protein AfsQ1%2C 225 aa%3B fasta scores: opt: 698 z-score: 858.5 E(): 0%3B 47.7%25 identity in 220 aa overlap and to many other S. coelicolor two-component system response regulators%2C e.g. TR: CAB77324(EMBL:AL160331) response regulator SCD8A.03%2C 223 aa%3B fasta scores: opt: 695 z-score: 745.0 E(): 0%3B 50.2%25 identity in 223 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=SCE33.15c;product=two-component system response regulator;protein_id=NP_627235.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3288911	3289129	.	-	.	ID=id3762;Dbxref=GeneID:1098446;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 104.90%2C E-value 4.4e-30;gbkey=misc_feature;gene=SCE33.15c
NC_003888.3	RefSeq	sequence_feature	3289229	3289561	.	-	.	ID=id3763;Dbxref=GeneID:1098446;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 134.40%2C E-value 2e-36;gbkey=misc_feature;gene=SCE33.15c
NC_003888.3	RefSeq	gene	3289584	3290726	.	-	.	ID=gene3029;Dbxref=GeneID:1098447;Name=SCE33.16c;gbkey=Gene;gene=SCE33.16c;gene_biotype=protein_coding;gene_synonym=SCE33.16c;locus_tag=SCO3014
NC_003888.3	RefSeq	CDS	3289584	3290726	.	-	0	ID=cds2974;Parent=gene3029;Dbxref=Genbank:NP_627236.1,GeneID:1098447;Name=NP_627236.1;Note=SCE33.16c%2C possible translation initiation factor%2C len: 380 aa%3B similar to TR:Q9ZUG4 (EMBL:AC005970) Arabidopsis thaliana  translation initiation factor EIF-2B alpha subunit T6P5.3%2C 365 aa%3B fasta scores: opt: 631 z-score: 658.4 E(): 3.2e-29%3B 37.6%25 identity in 338 aa overlap. Contains Pfam match to entry PF01008 IF-2B%2C Initiation factor 2 subunit family;gbkey=CDS;gene=SCE33.16c;product=translation initiation factor;protein_id=NP_627236.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3289638	3290585	.	-	.	ID=id3764;Dbxref=GeneID:1098447;Note=Pfam match to entry PF01008 IF-2B%2C Initiation factor 2 subunit family%2C score 234.90%2C E-value 1.1e-66;gbkey=misc_feature;gene=SCE33.16c
NC_003888.3	RefSeq	gene	3290867	3292255	.	+	.	ID=gene3030;Dbxref=GeneID:1098448;Name=SCE33.17;gbkey=Gene;gene=SCE33.17;gene_biotype=protein_coding;gene_synonym=SCE33.17;locus_tag=SCO3015
NC_003888.3	RefSeq	CDS	3290867	3292255	.	+	0	ID=cds2975;Parent=gene3030;Dbxref=Genbank:NP_627237.1,GeneID:1098448;Name=NP_627237.1;Note=SCE33.17%2C possible integral membrane protein%2C len: 462 aa%3B similar to TR:O69657 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical 46.4 kD protein MTV025.037%2C 451 aa%3B fasta scores: opt: 730 z-score: 506.4 E(): 9.5e-21%3B 38.1%25 identity in 412 aa overlap. Contains possible hydrophobic membrane spanning regions and high content in proline and glycine amino acid residues;gbkey=CDS;gene=SCE33.17;product=hypothetical protein;protein_id=NP_627237.1;transl_table=11
NC_003888.3	RefSeq	gene	3292317	3293012	.	+	.	ID=gene3031;Dbxref=GeneID:1098449;Name=SCE33.18;gbkey=Gene;gene=SCE33.18;gene_biotype=protein_coding;gene_synonym=SCE33.18;locus_tag=SCO3016
NC_003888.3	RefSeq	CDS	3292317	3293012	.	+	0	ID=cds2976;Parent=gene3031;Dbxref=Genbank:NP_627238.1,GeneID:1098449;Name=NP_627238.1;Note=SCE33.18%2C possible integral membrane protein%2C len: 231 aa%3B similar to TR:O69658 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical 23.8 kD protein MTV025.038%2C 217 aa%3B fasta scores: opt: 419 z-score: 493.8 E(): 4.8e-20%3B 36.0%25 identity in 211 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE33.18;product=hypothetical protein;protein_id=NP_627238.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3292998	3293001	.	+	.	ID=id3765;Dbxref=GeneID:1098449;gbkey=RBS;gene=SCE33.18
NC_003888.3	RefSeq	gene	3293063	3294226	.	+	.	ID=gene3032;Dbxref=GeneID:1098450;Name=SCE33.19;gbkey=Gene;gene=SCE33.19;gene_biotype=protein_coding;gene_synonym=SCE33.19;locus_tag=SCO3017
NC_003888.3	RefSeq	CDS	3293063	3294226	.	+	0	ID=cds2977;Parent=gene3032;Dbxref=Genbank:NP_627239.1,GeneID:1098450;Name=NP_627239.1;Note=SCE33.19%2C possible hypothetical protein%2C len: 387 aa%3B similar to TR:O69659 (EMBL::AL022121) Mycobacterium tuberculosis hypothetical 355 kD protein MTV025.039%2C 333 aa%3B fasta scores: opt: 481 z-score: 542.0 E(): 9.9e-23%3B 36.6%25 identity in 358 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE33.19;product=hypothetical protein;protein_id=NP_627239.1;transl_table=11
NC_003888.3	RefSeq	gene	3294226	3295215	.	+	.	ID=gene3033;Dbxref=GeneID:1098451;Name=SCE33.20;gbkey=Gene;gene=SCE33.20;gene_biotype=protein_coding;gene_synonym=SCE33.20;locus_tag=SCO3018
NC_003888.3	RefSeq	CDS	3294226	3295215	.	+	0	ID=cds2978;Parent=gene3033;Dbxref=Genbank:NP_627240.1,GeneID:1098451;Name=NP_627240.1;Note=SCE33.20%2C possible regulatory protein%2C len: 329 aa%3B similar to TR:O69660 (EMBL:AL022121) Mycobacterium tuberculosis  regulatory protein MTV025.040%2C 358 aa%3B fasta scores: opt: 1523 z-score: 1708.1 E(): 0%3B 70.9%25 identity in 330 aa overlap and to TR:CAA22801 (EMBL:AL035212) Streptomyces coelicolor regulatory protein%2C SC9B2.21c%2C 332 aa%3B fasta scores: opt: 956 z-score: 937.8 E(): 0%3B 50.7%25 identity in 306 aa overlap. Contains Pfam match to entry PF01078 Mg_chelatase%2C Magnesium chelatase%2C subunit ChlI;gbkey=CDS;gene=SCE33.20;product=regulatory protein;protein_id=NP_627240.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3294277	3295194	.	+	.	ID=id3766;Dbxref=GeneID:1098451;Note=Pfam match to entry PF01078 Mg_chelatase%2C Magnesium chelatase%2C subunit ChlI%2C score 26.90%2C E-value 2.2e-07;gbkey=misc_feature;gene=SCE33.20
NC_003888.3	RefSeq	gene	3295215	3296525	.	+	.	ID=gene3034;Dbxref=GeneID:1098452;Name=SCE33.21;gbkey=Gene;gene=SCE33.21;gene_biotype=protein_coding;gene_synonym=SCE33.21;locus_tag=SCO3019
NC_003888.3	RefSeq	CDS	3295215	3296525	.	+	0	ID=cds2979;Parent=gene3034;Dbxref=Genbank:NP_627241.1,GeneID:1098452;Name=NP_627241.1;Note=SCE33.21%2C possible lipoprotein%2C len: 436 aa%3B similar to TR:O69661 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical 47.7 kD protein MTV025.041%2C 440 aa%3B fasta scores: opt: 875 z-score: 982.3 E(): 0%3B 56.3%25 identity in 448 aa overlap. Contains Pfam match to entry PF01882 DUF58%2C Protein of unknown function and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE33.21;product=lipoprotein;protein_id=NP_627241.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3295299	3295331	.	+	.	ID=id3767;Dbxref=GeneID:1098452;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE33.21
NC_003888.3	RefSeq	sequence_feature	3295587	3296150	.	+	.	ID=id3768;Dbxref=GeneID:1098452;Note=Pfam match to entry PF01882 DUF58%2C Protein of unknown function%2C score 169.50%2C E-value 5.7e-47;gbkey=misc_feature;gene=SCE33.21
NC_003888.3	RefSeq	gene	3296634	3296750	.	-	.	ID=gene3035;Dbxref=GeneID:3240025;Name=SCOr07;gbkey=Gene;gene_biotype=rRNA;locus_tag=SCOr07
NC_003888.3	RefSeq	rRNA	3296634	3296750	.	-	.	ID=rna31;Parent=gene3035;Dbxref=GeneID:3240025;Note=probable 5S rRNA%2C coordinates taken from similarity to SW:SARRND (EMBL:M27245) Streptomyces ambifaciens rrnD gene cluster encoding 16S%2C 23S and 5S ribosomal RNAs;gbkey=rRNA;product=5S ribosomal RNA
NC_003888.3	RefSeq	exon	3296634	3296750	.	-	.	ID=id3769;Parent=rna31;Dbxref=GeneID:3240025;Note=probable 5S rRNA%2C coordinates taken from similarity to SW:SARRND (EMBL:M27245) Streptomyces ambifaciens rrnD gene cluster encoding 16S%2C 23S and 5S ribosomal RNAs;gbkey=rRNA;product=5S ribosomal RNA
NC_003888.3	RefSeq	gene	3296833	3300011	.	-	.	ID=gene3036;Dbxref=GeneID:3240026;Name=SCOr08;gbkey=Gene;gene_biotype=rRNA;locus_tag=SCOr08
NC_003888.3	RefSeq	rRNA	3296833	3300011	.	-	.	ID=rna32;Parent=gene3036;Dbxref=GeneID:3240026;Note=probable 23S rRNA%2C coordinates taken from similarity to SW:SARRND (EMBL:M27245) Streptomyces ambifaciens rrnD gene cluster encoding 16S%2C 23S and 5S ribosomal RNAs;gbkey=rRNA;product=23S ribosomal RNA
NC_003888.3	RefSeq	exon	3296833	3300011	.	-	.	ID=id3770;Parent=rna32;Dbxref=GeneID:3240026;Note=probable 23S rRNA%2C coordinates taken from similarity to SW:SARRND (EMBL:M27245) Streptomyces ambifaciens rrnD gene cluster encoding 16S%2C 23S and 5S ribosomal RNAs;gbkey=rRNA;product=23S ribosomal RNA
NC_003888.3	RefSeq	gene	3300208	3301965	.	-	.	ID=gene3037;Dbxref=GeneID:3240027;Name=SCOr09;gbkey=Gene;gene_biotype=rRNA;locus_tag=SCOr09
NC_003888.3	RefSeq	rRNA	3300208	3301965	.	-	.	ID=rna33;Parent=gene3037;Dbxref=GeneID:3240027;Note=probable 16S ribosomal RNA. Coodinates taken from similarity to SW:SARRND (EMBL:M27245) Streptomyces ambifaciens rrnD gene cluster encoding 16S%2C 23S and 5S ribosomal RNAs;gbkey=rRNA;product=16S ribosomal RNA
NC_003888.3	RefSeq	exon	3300208	3301965	.	-	.	ID=id3771;Parent=rna33;Dbxref=GeneID:3240027;Note=probable 16S ribosomal RNA. Coodinates taken from similarity to SW:SARRND (EMBL:M27245) Streptomyces ambifaciens rrnD gene cluster encoding 16S%2C 23S and 5S ribosomal RNAs;gbkey=rRNA;product=16S ribosomal RNA
NC_003888.3	RefSeq	gene	3302319	3303326	.	-	.	ID=gene3038;Dbxref=GeneID:1098453;Name=SCE34.01c;gbkey=Gene;gene=SCE34.01c;gene_biotype=protein_coding;gene_synonym=SCE34.01c;locus_tag=SCO3020
NC_003888.3	RefSeq	CDS	3302319	3303326	.	-	0	ID=cds2980;Parent=gene3038;Dbxref=Genbank:NP_627242.1,GeneID:1098453;Name=NP_627242.1;Note=SCE34.01c%2C possible integral membrane protein%2C len: 335 aa%3B similar to TR:O69662 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical 35.5 kD protein MTV025.042c%2C 330 aa%3B fasta scores: opt: 1119 z-score: 1285.3 E(): 0%3B 51.8%25 identity in 334 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE34.01c;product=hypothetical protein;protein_id=NP_627242.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3303338	3303343	.	-	.	ID=id3772;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3303438	3303444	.	+	.	ID=id3773;gbkey=RBS
NC_003888.3	RefSeq	gene	3303453	3304409	.	+	.	ID=gene3039;Dbxref=GeneID:1098454;Name=SCE34.02;gbkey=Gene;gene=SCE34.02;gene_biotype=protein_coding;gene_synonym=SCE34.02;locus_tag=SCO3021
NC_003888.3	RefSeq	CDS	3303453	3304409	.	+	0	ID=cds2981;Parent=gene3039;Dbxref=Genbank:NP_627243.1,GeneID:1098454;Name=NP_627243.1;Note=SCE34.02%2C possible integral membrane protein%2C len: 318 aa%3B similar to TR:O69663 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical 33.2 kD protein MTV025.043%2C 310 aa%3B fasta scores: opt: 734 z-score: 602.4 E(): 4.3e-26%3B 42.9%25 identity in 319 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE34.02;product=hypothetical protein;protein_id=NP_627243.1;transl_table=11
NC_003888.3	RefSeq	gene	3304430	3305044	.	-	.	ID=gene3040;Dbxref=GeneID:1098455;Name=SCE34.03c;gbkey=Gene;gene=SCE34.03c;gene_biotype=protein_coding;gene_synonym=SCE34.03c;locus_tag=SCO3022
NC_003888.3	RefSeq	CDS	3304430	3305044	.	-	0	ID=cds2982;Parent=gene3040;Dbxref=Genbank:NP_627244.1,GeneID:1098455;Name=NP_627244.1;Note=SCE34.03c%2C unknown%2C len: 204 aa;gbkey=CDS;gene=SCE34.03c;product=hypothetical protein;protein_id=NP_627244.1;transl_table=11
NC_003888.3	RefSeq	gene	3305155	3306612	.	-	.	ID=gene3041;Dbxref=GeneID:1098456;Name=sahH;gbkey=Gene;gene=sahH;gene_biotype=protein_coding;gene_synonym=sahH,SCE34.04c;locus_tag=SCO3023
NC_003888.3	RefSeq	CDS	3305155	3306612	.	-	0	ID=cds2983;Parent=gene3041;Dbxref=Genbank:NP_627245.1,GeneID:1098456;Name=NP_627245.1;Note=catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine;gbkey=CDS;gene=sahH;product=adenosylhomocysteinase;protein_id=NP_627245.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3305329	3306582	.	-	.	ID=id3774;Dbxref=GeneID:1098456;Note=Pfam match to entry PF00670 AdoHcyase%2C S-adenosyl-L-homocysteine hydrolase%2C score 1004.10%2C E-value 3.3e-298;gbkey=misc_feature;gene=sahH
NC_003888.3	RefSeq	sequence_feature	3305770	3305820	.	-	.	ID=id3775;Dbxref=GeneID:1098456;Note=PS00739 S-adenosyl-L-homocysteine hydrolase signature 2;gbkey=misc_feature;gene=sahH
NC_003888.3	RefSeq	sequence_feature	3306328	3306372	.	-	.	ID=id3776;Dbxref=GeneID:1098456;Note=PS00738 S-adenosyl-L-homocysteine hydrolase signature 1;gbkey=misc_feature;gene=sahH
NC_003888.3	RefSeq	ribosome_entry_site	3306622	3306627	.	-	.	ID=id3777;gbkey=RBS
NC_003888.3	RefSeq	gene	3306886	3307866	.	-	.	ID=gene3042;Dbxref=GeneID:1098457;Name=SCE34.05c;gbkey=Gene;gene=SCE34.05c;gene_biotype=protein_coding;gene_synonym=SCE34.05c;locus_tag=SCO3024
NC_003888.3	RefSeq	CDS	3306886	3307866	.	-	0	ID=cds2984;Parent=gene3042;Dbxref=Genbank:NP_627246.1,GeneID:1098457;Name=NP_627246.1;Note=SCE34.05c%2C possible transport protein%2C len: 326 aa%3B similar to TR:AAF26917 (EMBL:AF210843) Sorangium cellulosum  transport protein%2C 305 aa%3B fasta scores: opt: 629 z-score: 707.7 E(): 5.9e-32%3B 37.8%25 identity in 299 aa overlap. Contains Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE34.05c;product=transporter;protein_id=NP_627246.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3306961	3307680	.	-	.	ID=id3778;Dbxref=GeneID:1098457;Note=Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family%2C score 24.90%2C E-value 4e-05;gbkey=misc_feature;gene=SCE34.05c
NC_003888.3	RefSeq	gene	3307981	3309132	.	-	.	ID=gene3043;Dbxref=GeneID:1098458;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;gene_synonym=manA,SCE34.06c;locus_tag=SCO3025
NC_003888.3	RefSeq	CDS	3307981	3309132	.	-	0	ID=cds2985;Parent=gene3043;Dbxref=Genbank:NP_627247.1,GeneID:1098458;Name=NP_627247.1;Note=SCE34.06c%2C manA%2C mannose-6-phosphate isomerase%2C len: 383 aa%3B similar to SW:MANA_ECOLI (EMBL:M15380) Escherichia coli mannose-6-phosphate isomerase (EC 5.3.1.8) ManA%2C 391 aa%3B fasta scores: opt: 912 z-score: 1055.7 E(): 0%3B 40.9%25 identity in 391 aa overlap. Contains Pfam match to entry PF01238 PMI_typeI%2C Phosphomannose isomerase type I and match to Prosite entry S00965 Phosphomannose isomerase type I signature 1;gbkey=CDS;gene=manA;product=mannose-6-phosphate isomerase;protein_id=NP_627247.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3308071	3309132	.	-	.	ID=id3779;Dbxref=GeneID:1098458;Note=Pfam match to entry PF01238 PMI_typeI%2C Phosphomannose isomerase type I%2C score 254.40%2C E-value 1.5e-72;gbkey=misc_feature;gene=manA
NC_003888.3	RefSeq	sequence_feature	3308746	3308772	.	-	.	ID=id3780;Dbxref=GeneID:1098458;Note=PS00965 Phosphomannose isomerase type I signature 1;gbkey=misc_feature;gene=manA
NC_003888.3	RefSeq	gene	3309183	3310310	.	-	.	ID=gene3044;Dbxref=GeneID:1098459;Name=SCE34.07c;gbkey=Gene;gene=SCE34.07c;gene_biotype=protein_coding;gene_synonym=SCE34.07c;locus_tag=SCO3026
NC_003888.3	RefSeq	CDS	3309183	3310310	.	-	0	ID=cds2986;Parent=gene3044;Dbxref=Genbank:NP_627248.1,GeneID:1098459;Name=NP_627248.1;Note=SCE34.07c%2C hypothetical protein%2C len: 375 aa%3B similar to TR:O05899 (EMBL:Z95121) Mycobacterium tuberculosis hypothetical 35.3 kD protein RV3256c%2C 346 aa%3B fasta scores: opt: 171 z-score: 187.3 E(): 0.0057%3B 31.1%25 identity in 376 aa overlap;gbkey=CDS;gene=SCE34.07c;product=hypothetical protein;protein_id=NP_627248.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3310320	3310324	.	-	.	ID=id3781;gbkey=RBS
NC_003888.3	RefSeq	gene	3310398	3310568	.	-	.	ID=gene3045;Dbxref=GeneID:1098460;Name=SCD84.08c;gbkey=Gene;gene=SCD84.08c;gene_biotype=protein_coding;gene_synonym=SCD84.08c;locus_tag=SCO3027
NC_003888.3	RefSeq	CDS	3310398	3310568	.	-	0	ID=cds2987;Parent=gene3045;Dbxref=Genbank:NP_627249.1,GeneID:1098460;Name=NP_627249.1;Note=SCD84.08c%2C hypothetical protein%2C len: 56 aa%3B similar to SW:YCAR_ECOLI (EMBL:AE000193) Escherichia coli%2C hypotheical 6.9 kD protein in MsbA-KdsB intergenic region YcaR%2C 60 aa%3B fasta scores: opt: 159 z-score: 238.1 E(): 8.3e-06%3B 55.1%25 identity in 49 aa overlap;gbkey=CDS;gene=SCD84.08c;product=hypothetical protein;protein_id=NP_627249.1;transl_table=11
NC_003888.3	RefSeq	gene	3310820	3312184	.	-	.	ID=gene3046;Dbxref=GeneID:1098461;Name=manB;gbkey=Gene;gene=manB;gene_biotype=protein_coding;gene_synonym=SCE34.09c;locus_tag=SCO3028
NC_003888.3	RefSeq	CDS	3310820	3312184	.	-	0	ID=cds2988;Parent=gene3046;Dbxref=Genbank:NP_627250.1,GeneID:1098461;Name=NP_627250.1;Note=converts mannose-6-phosphate to mannose-1-phosphate%3B the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells;gbkey=CDS;gene=manB;product=phosphomannomutase;protein_id=NP_627250.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3310859	3312172	.	-	.	ID=id3782;Dbxref=GeneID:1098461;Note=Pfam match to entry PF00408 PGM_PMM%2C Phosphoglucomutase/phosphomannomutase%2C score 423.40%2C E-value 2.1e-123;gbkey=misc_feature;gene=manB
NC_003888.3	RefSeq	gene	3312276	3313892	.	-	.	ID=gene3047;Dbxref=GeneID:1098462;Name=SCE34.10c;gbkey=Gene;gene=SCE34.10c;gene_biotype=protein_coding;gene_synonym=SCE34.10c;locus_tag=SCO3029
NC_003888.3	RefSeq	CDS	3312276	3313892	.	-	0	ID=cds2989;Parent=gene3047;Dbxref=Genbank:NP_627251.1,GeneID:1098462;Name=NP_627251.1;Note=SCE34.10c%2C possible L-lactate permease%2C len: 538 aa%3B similar to SW:LLDP_ECOLI (EMBL:L13970) Escherichia coli L-lactate permease LldP%2C 551 aa%3B fasta scores: opt: 825 z-score: 909.1 E(): 0%3B 40.0%25 identity in 552 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE34.10c;product=L-lactate permease;protein_id=NP_627251.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3313898	3313902	.	-	.	ID=id3783;gbkey=RBS
NC_003888.3	RefSeq	gene	3314042	3314464	.	-	.	ID=gene3048;Dbxref=GeneID:1098463;Name=SCE34.11c;gbkey=Gene;gene=SCE34.11c;gene_biotype=protein_coding;gene_synonym=SCE34.11c;locus_tag=SCO3030
NC_003888.3	RefSeq	CDS	3314042	3314464	.	-	0	ID=cds2990;Parent=gene3048;Dbxref=Genbank:NP_627252.1,GeneID:1098463;Name=NP_627252.1;Note=SCE34.11c%2C hypothetical protein%2C len: 140 aa%3B similar to TR:O53351 (EMBL:AL021840) Mycobacterium tuberculosis hypothetical 16.8 kD protein MTV015.30c%2C 163 aa%3B fasta scores: opt: 353 z-score: 430.4 E(): 1.6e-16%3B 48.3%25 identity in 147 aa overlap;gbkey=CDS;gene=SCE34.11c;product=hypothetical protein;protein_id=NP_627252.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3314470	3314473	.	-	.	ID=id3784;gbkey=RBS
NC_003888.3	RefSeq	gene	3314858	3315211	.	+	.	ID=gene3049;Dbxref=GeneID:1098464;Name=SCE34.12;gbkey=Gene;gene=SCE34.12;gene_biotype=protein_coding;gene_synonym=SCE34.12;locus_tag=SCO3031
NC_003888.3	RefSeq	CDS	3314858	3315211	.	+	0	ID=cds2991;Parent=gene3049;Dbxref=Genbank:NP_627253.1,GeneID:1098464;Name=NP_627253.1;Note=SCE34.12%2C hypothetical protein%2C len: 117 aa%3B similar to TR:AAD4708 (EMBL:AF164439) Mycobacterium smegmatis hypothetical 6.0 kD protein (fragment)%2C 54 aa%3B fasta scores: opt: 184 z-score: 255.1 E(): 9.4e-07%3B 46.3%25 identity in 54 aa overlap;gbkey=CDS;gene=SCE34.12;product=hypothetical protein;protein_id=NP_627253.1;transl_table=11
NC_003888.3	RefSeq	gene	3315241	3316761	.	-	.	ID=gene3050;Dbxref=GeneID:1098465;Name=SCE34.13c;gbkey=Gene;gene=SCE34.13c;gene_biotype=protein_coding;gene_synonym=SCE34.13c;locus_tag=SCO3032
NC_003888.3	RefSeq	CDS	3315241	3316761	.	-	0	ID=cds2992;Parent=gene3050;Dbxref=Genbank:NP_627254.1,GeneID:1098465;Name=NP_627254.1;Note=SCE34.13c%2C possible hypothetical protein%2C len: 506 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE34.13c;product=hypothetical protein;protein_id=NP_627254.1;transl_table=11
NC_003888.3	RefSeq	gene	3316758	3320564	.	-	.	ID=gene3051;Dbxref=GeneID:1098466;Name=SCE34.14c;gbkey=Gene;gene=SCE34.14c;gene_biotype=protein_coding;gene_synonym=SCE34.14c;locus_tag=SCO3033
NC_003888.3	RefSeq	CDS	3316758	3320564	.	-	0	ID=cds2993;Parent=gene3051;Dbxref=Genbank:NP_627255.1,GeneID:1098466;Name=NP_627255.1;Note=SCE34.14c%2C possible integral membrane regulatory protein%2C len: 1268 aa%3B N-terminal region identical to previously sequenced TR:Q53964 (EMBL:X62287) Streptomyces coelicolor regulatory protein WhiB%2C 914 aa and highly similar to TR:Q53785 (EMBL:L22864) Streptomyces aureofaciens transmembrane protein WhiB2%2C 1219 aa%3B fasta scores: opt: 4895 z-score: 4433.4 E(): 0%3B 62.0%25 identity in 1267 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE34.14c;product=integral membrane regulatory protein;protein_id=NP_627255.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3316768	3316771	.	-	.	ID=id3785;Dbxref=GeneID:1098466;gbkey=RBS;gene=SCE34.14c
NC_003888.3	RefSeq	sequence_feature	3317820	3321310	.	-	.	ID=id3786;Note=previously sequenced fragment EMBL:X62287;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3320753	3321016	.	-	.	ID=gene3052;Dbxref=GeneID:1098467;Name=SCE34.15c;gbkey=Gene;gene=SCE34.15c;gene_biotype=protein_coding;gene_synonym=SCE34.15c,whiB;locus_tag=SCO3034
NC_003888.3	RefSeq	CDS	3320753	3321016	.	-	0	ID=cds2994;Parent=gene3052;Dbxref=Genbank:NP_627256.1,GeneID:1098467;Name=NP_627256.1;Note=SCE34.15c%2C whiB%2C sporulation regulatory protein%2C len: 87 aa%3B identical to previously sequenced TR:Q53963 (EMBL:X62287) Streptomyces coelicolor regulatory protein WhiB%2C 87 aa also highly similar to TR:Q9XAL5 (EMBL:AL079355) Streptomyces coelicolor probable transcriptional regulator SC4C6.25%2C 81 aa%3B fasta scores: opt: 336 z-score: 473.5 E(): 7.3e-21%3B 61.1%25 identity in 72 aa overlap;gbkey=CDS;gene=SCE34.15c;product=sporulation regulatory protein;protein_id=NP_627256.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3321024	3321027	.	-	.	ID=id3787;gbkey=RBS
NC_003888.3	RefSeq	gene	3321701	3322195	.	+	.	ID=gene3053;Dbxref=GeneID:1098468;Name=SCE34.16;gbkey=Gene;gene=SCE34.16;gene_biotype=protein_coding;gene_synonym=SCE34.16;locus_tag=SCO3035
NC_003888.3	RefSeq	CDS	3321701	3322195	.	+	0	ID=cds2995;Parent=gene3053;Dbxref=Genbank:NP_627257.1,GeneID:1098468;Name=NP_627257.1;Note=SCE34.16%2C hypothetical protein%2C len: 164 aa%3B similar to TR:O53413 (EMBL:AL021897) Mycobacterium tuberculosis hypothetical 20.6 kD protein MTV017.18%2C 188 aa%3B fasta scores: opt: 251 z-score: 321.5 E(): 1.9e-10%3B 39.6%25 identity in 154 aa overlap;gbkey=CDS;gene=SCE34.16;product=hypothetical protein;protein_id=NP_627257.1;transl_table=11
NC_003888.3	RefSeq	gene	3322266	3323225	.	+	.	ID=gene3054;Dbxref=GeneID:1098469;Name=SCE34.17;gbkey=Gene;gene=SCE34.17;gene_biotype=protein_coding;gene_synonym=SCE34.17;locus_tag=SCO3036
NC_003888.3	RefSeq	CDS	3322266	3323225	.	+	0	ID=cds2996;Parent=gene3054;Dbxref=Genbank:NP_627258.1,GeneID:1098469;Name=NP_627258.1;Note=catalyzes the formation of the L-lactyl phosphodiester of 7%2C8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7%2C8-didemethyl-8-hydroxy-5-deazariboflavin (FO);gbkey=CDS;gene=SCE34.17;product=2-phospho-L-lactate transferase;protein_id=NP_627258.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3322272	3323213	.	+	.	ID=id3788;Dbxref=GeneID:1098469;Note=Pfam match to entry PF01933 UPF0052%2C Uncharacterised protein family%2C score 471.20%2C E-value 8.4e-138;gbkey=misc_feature;gene=SCE34.17
NC_003888.3	RefSeq	ribosome_entry_site	3323216	3323220	.	+	.	ID=id3789;Dbxref=GeneID:1098469;gbkey=RBS;gene=SCE34.17
NC_003888.3	RefSeq	gene	3323222	3324553	.	+	.	ID=gene3055;Dbxref=GeneID:1098470;Name=SCE34.18;gbkey=Gene;gene=SCE34.18;gene_biotype=protein_coding;gene_synonym=SCE34.18;locus_tag=SCO3037
NC_003888.3	RefSeq	CDS	3323222	3324553	.	+	0	ID=cds2997;Parent=gene3055;Dbxref=Genbank:NP_627259.1,GeneID:1098470;Name=NP_627259.1;Note=catalyzes the addition of gamma linked glutamate to 7%2C8-didemethyl-8-hydroxy-5-deazariboflavin coenzyme F420-0);gbkey=CDS;gene=SCE34.18;product=F420-0--gamma-glutamyl ligase;protein_id=NP_627259.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3323267	3323947	.	+	.	ID=id3790;Dbxref=GeneID:1098470;Note=Pfam match to entry PF01996 DUF129%2C Protein of unknown function%2C score 225.90%2C E-value 5.7e-64;gbkey=misc_feature;gene=SCE34.18
NC_003888.3	RefSeq	sequence_feature	3323960	3324514	.	+	.	ID=id3791;Dbxref=GeneID:1098470;Note=Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family%2C score 9.40%2C E-value 0.00075;gbkey=misc_feature;gene=SCE34.18
NC_003888.3	RefSeq	gene	3324630	3325610	.	+	.	ID=gene3056;Dbxref=GeneID:1098471;Name=SCE34.19;gbkey=Gene;gene=SCE34.19;gene_biotype=protein_coding;gene_synonym=SCE34.19;locus_tag=SCO3038
NC_003888.3	RefSeq	CDS	3324630	3325610	.	+	0	ID=cds2998;Parent=gene3056;Dbxref=Genbank:NP_627260.1,GeneID:1098471;Name=NP_627260.1;Note=SCE34.19%2C hypothetical protein%2C len: 326 aa%3B similar to TR:P96819 (EMB:LZ92770) Mycobacterium tuberculosis hypothetical 33.0 kD protein MTCI5.16%2C 308 aa%3B fasta scores: opt: 902 z-score: 980.1 E(): 0%3B 51.2%25 identity in 287 aa overlap and C-terminal region presents low similarity to SW:3MGA_BACSU (EMBLD14465:) Bacillus subtilis DNA-3-methyladenine glycosylase (EC 3.2.2.21) AlkA%2C 303 aa%3B fasta scores: opt: 146 z-score: 166.1 E(): 0.086%3B 23.6%25 identity in 208 aa overlap;gbkey=CDS;gene=SCE34.19;product=hypothetical protein;protein_id=NP_627260.1;transl_table=11
NC_003888.3	RefSeq	gene	3325773	3326855	.	-	.	ID=gene3057;Dbxref=GeneID:1098472;Name=SCE34.20c;gbkey=Gene;gene=SCE34.20c;gene_biotype=protein_coding;gene_synonym=SCE34.20c;locus_tag=SCO3039
NC_003888.3	RefSeq	CDS	3325773	3326855	.	-	0	ID=cds2999;Parent=gene3057;Dbxref=Genbank:NP_627261.1,GeneID:1098472;Name=NP_627261.1;Note=SCE34.20c%2C probable nucleotide phosphorylase%2C len: 360 aa%3B similar to SW:MPG1_YEAST (EMBL:U19608) Saccharomyces cerevisiae mannose-1-phosphate guanyltransferase (EC 2.7.7.13) Mpg1%2C 361 aa%3B fasta scores: opt: 570 z-score: 625.6 E(): 2.2e-27%3B 30.8%25 identity in 347 aa overlap. Contains Pfam matches to entries PF00483 NTP_transferase%2C Nucleotidyl transferase and 3x PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats);gbkey=CDS;gene=SCE34.20c;product=nucleotide phosphorylase;protein_id=NP_627261.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3325839	3325892	.	-	.	ID=id3792;Dbxref=GeneID:1098472;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.90%2C E-value 16;gbkey=misc_feature;gene=SCE34.20c
NC_003888.3	RefSeq	sequence_feature	3325941	3325994	.	-	.	ID=id3793;Dbxref=GeneID:1098472;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 12.20%2C E-value 13;gbkey=misc_feature;gene=SCE34.20c
NC_003888.3	RefSeq	sequence_feature	3326028	3326081	.	-	.	ID=id3794;Dbxref=GeneID:1098472;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 5.90%2C E-value 1.2e+02;gbkey=misc_feature;gene=SCE34.20c
NC_003888.3	RefSeq	sequence_feature	3326136	3326849	.	-	.	ID=id3795;Dbxref=GeneID:1098472;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C score 197.50%2C E-value 2.1e-55;gbkey=misc_feature;gene=SCE34.20c
NC_003888.3	RefSeq	gene	3326959	3328209	.	-	.	ID=gene3058;Dbxref=GeneID:1098473;Name=SCE34.21c;gbkey=Gene;gene=SCE34.21c;gene_biotype=protein_coding;gene_synonym=SCE34.21c;locus_tag=SCO3040
NC_003888.3	RefSeq	CDS	3326959	3328209	.	-	0	ID=cds3000;Parent=gene3058;Dbxref=Genbank:NP_627262.1,GeneID:1098473;Name=NP_627262.1;Note=SCE34.21c%2C possible hypothetical protein%2C len: 416 aa%3B similar to TR:CAB51271 (EMBL:AL096872) Streptomyces coelicolor hypothetical 31.9 kD protein SC5F7.14c%2C 308 aa%3B fasta scores: opt: 646 z-score: 629.8 E(): 1.3e-27%3B 40.5%25 identity in 304 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE34.21c;product=hypothetical protein;protein_id=NP_627262.1;transl_table=11
NC_003888.3	RefSeq	gene	3328322	3329113	.	+	.	ID=gene3059;Dbxref=GeneID:1098474;Name=SCE34.22;gbkey=Gene;gene=SCE34.22;gene_biotype=protein_coding;gene_synonym=SCE34.22;locus_tag=SCO3041
NC_003888.3	RefSeq	CDS	3328322	3329113	.	+	0	ID=cds3001;Parent=gene3059;Dbxref=Genbank:NP_627263.1,GeneID:1098474;Name=NP_627263.1;Note=SCE34.22%2C hypothetical protein%2C len: 263 aa%3B similar to TR:P96873 (EMBL:Z92771) Mycobacterium tuberculosis hypothetical 23.7 kD protein%2C 229 aa%3B fasta scores: opt: 442 z-score: 490.8 E(): 7.1e-20%3B 40.1%25 identity in 242 aa overlap;gbkey=CDS;gene=SCE34.22;product=hypothetical protein;protein_id=NP_627263.1;transl_table=11
NC_003888.3	RefSeq	gene	3329406	3330596	.	+	.	ID=gene3060;Dbxref=GeneID:1098475;Name=SCE34.23;gbkey=Gene;gene=SCE34.23;gene_biotype=protein_coding;gene_synonym=SCE34.23;locus_tag=SCO3042
NC_003888.3	RefSeq	CDS	3329406	3330596	.	+	0	ID=cds3002;Parent=gene3060;Dbxref=Genbank:NP_627264.1,GeneID:1098475;Name=NP_627264.1;Note=SCE34.23%2C possible transcriptional regulator%2C len: 396 aa%3B similar to TR:O86796 (EMBL:AL031317) Streptomyces coelicolor  transcriptional regulator SC6G4.33%2C 360 aa%3B fasta scores: opt: 792 z-score: 875.9 E(): 0%3B 43.3%25 identity in 363 aa overlap%2C to TR:O68907 (EMBL:AF05830) Streptomyces roseofulvus FrnA%2C 770 aa%3B fasta scores: opt: 686 z-score: 739.2 E(): 0%3B 41.3%25 identity in 283 aa overlap%2C to Streptomyces coelicolor SCE34.26%2C 507 aa%3B fasta scores: opt: 709 z-score: 659.1 E(): 3.4e-31%3B 36.4%25 identity in 357 aa overlap%2C StE34.25%2C 507 aa%3B fasta scores: opt: 671 z-score: 624.0 E(): 3e-29%3B33.2%25 identity in 365 aa overlap%2C to SCE34.24%2C 472 aa%3B fasta scores: opt: 666 z-score: 619.9 E(): 5.2e-29%3B 38.0%25 identity in 324 aa overlap and to SCE34.27 (partial)%2C >356 aa%3B fasta scores: opt: 554 z-score: 518.2 E(): 2.4e-23%3B 35.7%25 identity in 361 aa overlap. Contains a possible hydrophobic membrane spanning region at N-terminal domain;gbkey=CDS;gene=SCE34.23;product=transcriptional regulator;protein_id=NP_627264.1;transl_table=11
NC_003888.3	RefSeq	gene	3331178	3332596	.	+	.	ID=gene3061;Dbxref=GeneID:1098476;Name=SCE34.24;gbkey=Gene;gene=SCE34.24;gene_biotype=protein_coding;gene_synonym=SCE34.24;locus_tag=SCO3043
NC_003888.3	RefSeq	CDS	3331178	3332596	.	+	0	ID=cds3003;Parent=gene3061;Dbxref=Genbank:NP_627265.1,GeneID:1098476;Name=NP_627265.1;Note=SCE34.24%2C conserved hypothetical protein%2C len: 472 aa%3B similar to TR:O68907 (EMBL:AF05830) Streptomyces roseofulvus FrnA%2C 770 aa%3B fasta scores: opt: 1249 z-score: 1391.4 E(): 0%3B 52.0%25 identity in 429 aa overlap%2C to Streptomyces coelicolor SCE34.26%2C 507 aa%3B fasta scores: opt: 2161 z-score: 2203.4 E(): 0%3B 70.9%25 identity in 471 aa overlap%2C to SCE34.23%2C 404 aa%3B fasta scores: opt: 666 z-score: 682.6 E(): 1.6e-32%3B 38.0%25 identity in 324 aa overlap%2C to SCE34.27 (fragment)%2C >356 aa%3B fasta scores: opt: 659 z-score: 676.4 E(): 3.7e-32%3B 39.9%25 identity in 348 aa overlap and to SCE35.25%2C 507 aa%3B fasta scores: opt: 644 z-score: 658.7 E(): 3.5e-31%3B 34.0%25 identity in 509 aa overlap;gbkey=CDS;gene=SCE34.24;product=hypothetical protein;protein_id=NP_627265.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3332934	3332939	.	+	.	ID=id3796;gbkey=RBS
NC_003888.3	RefSeq	gene	3332956	3334479	.	+	.	ID=gene3062;Dbxref=GeneID:1098477;Name=SCE34.25;gbkey=Gene;gene=SCE34.25;gene_biotype=protein_coding;gene_synonym=SCE34.25;locus_tag=SCO3044
NC_003888.3	RefSeq	CDS	3332956	3334479	.	+	0	ID=cds3004;Parent=gene3062;Dbxref=Genbank:NP_627266.1,GeneID:1098477;Name=NP_627266.1;Note=SCE34.25%2C conserved hypothetical protein%2C len: 507 aa%3B similar to TR:O68907 (EMBL:AF05830) Streptomyces roseofulvus FrnA%2C 770 aa%3B fasta scores: opt: 711 z-score: 770.7 E(): 0%3B 33.9%25 identity in 508 aa overlap%2C to Streptomyces coelicolor SCE34.27 (fagment)%2C >356 aa%3B fasta scores: opt: 1210 z-score: 1128.7 E(): 0%3B 51.5%25 identity in 359 aa overlap%2C to SCE34.26%2C 507 aa%3B fasta scores: opt: 739 z-score: 689.6 E(): 6.7e-33%3B 33.1%25 identity in 508 aa overlap%2C to SCE34.23%2C 404 aa%3B fasta scores: opt: 671 z-score: 628.0 E(): 1.8e-29%3B 33.2%25 identity in 365 aa overlap and to SCE34.24%2C 472 aa%3B fasta scores: opt: 644 z-score: 601.9 E(): 5.1e-28%3B 34.6%25 identity in 509 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE34.25;product=hypothetical protein;protein_id=NP_627266.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3334866	3334869	.	+	.	ID=id3797;gbkey=RBS
NC_003888.3	RefSeq	gene	3334869	3336392	.	+	.	ID=gene3063;Dbxref=GeneID:1098478;Name=SCE34.26;gbkey=Gene;gene=SCE34.26;gene_biotype=protein_coding;gene_synonym=SCE34.26;locus_tag=SCO3045
NC_003888.3	RefSeq	CDS	3334869	3336392	.	+	0	ID=cds3005;Parent=gene3063;Dbxref=Genbank:NP_627267.1,GeneID:1098478;Name=NP_627267.1;Note=SCE34.26%2C hypothetical protein%2C len: 507 aa%3B similar to TR:O68907 (EMBL:AF05830) Streptomyces roseofulvus FrnA%2C 770 aa%3B fasta scores: opt: 1350 z-score: 1461.9 E(): 0%3B 55.1%25 identity in 430 aa overlap%2C to Streptomyces coelicolor SCE34.24%2C 472 aa%3B fasta scores: opt: 2161 z-score: 2145.7 E(): 0%3B 70.9%25 identity in 471 aa overlap%2C to SCE34.25%2C 507 aa%3B fasta scores: opt: 739 z-score: 735.6 E(): 0%3B 31.9%25 identity in 508 aa overlap%2C to SCE34.23%2C 404 aa%3B fasta scores: opt: 709 z-score: 707.2 E(): 7e-34%3B 36.4%25 identity in 357 aa overlap and to SCE34.27 (fragment)%2C >356 aa%3B fasta scores: opt: 643 z-score: 642.5 E(): 2.8e-30%3B 39.5%25 identity in 354 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE34.26;product=hypothetical protein;protein_id=NP_627267.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3336456	3336460	.	+	.	ID=id3798;gbkey=RBS
NC_003888.3	RefSeq	gene	3336677	3338146	.	+	.	ID=gene3064;Dbxref=GeneID:1098479;Name=SCBAC19G2.01;gbkey=Gene;gene=SCBAC19G2.01;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.01,SCE34.27;locus_tag=SCO3046
NC_003888.3	RefSeq	CDS	3336677	3338146	.	+	0	ID=cds3006;Parent=gene3064;Dbxref=Genbank:NP_733590.1,GeneID:1098479;Name=NP_733590.1;Note=SCBAC19G2.01%2C conserved hypothetical protein%2C len: >199aa: similar to neighbouring gene TR:Q9KZK1 (EMBL:AL353862) conserved hypothetical protein SCE34.25 fasta scores%3B opt: 558%2C Z-score: 599.1%2C 44.796%25 identity (50.254%25 ungapped) in 221 aa overlap. Contains possible hydrophobic membrane spanning regions~SCE34.27%2C conserved hypothetical protein (fragment)%2C len: >357 aa%3B similar to TR:O68907 (EMBL:AF05830) Streptomyces roseofulvus FrnA%2C 770 aa%3B fasta scores: opt: 676 z-score: 755.5 E(): 0%3B 43.3%25 identity in 293 aa overlap%2C to Streptomyces coelicolor SCE34.25%2C 507 aa%3B fasta scores: opt: 1210 z-score: 1247.7 E(): 0%3B 51.5%25 identity in 359 aa overlap%2C to SCE34.24%2C 472 aa%3B fasta scores: opt: 659 z-score: 681.3 E(): 1.9e-32%3B 39.9%25 identity in 348 aa overlap%2C to SCE34.26%2C 507 aa%3B fasta scores: opt: 643 z-score: 664.4 E(): 1.7e-31%3B 39.5%25 identity in 354 aa overlap and to SCE34.23%2C 404 aa%3B fasta scores: opt: 554 z-score: 574.2 E(): 1.8e-26%3B 35.3%25 identity in 357 aa overlap;gbkey=CDS;gene=SCBAC19G2.01;product=hypothetical protein;protein_id=NP_733590.1;transl_table=11
NC_003888.3	RefSeq	gene	3338276	3339850	.	+	.	ID=gene3065;Dbxref=GeneID:1098480;Name=SCBAC19G2.02;gbkey=Gene;gene=SCBAC19G2.02;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.02;locus_tag=SCO3047
NC_003888.3	RefSeq	CDS	3338276	3339850	.	+	0	ID=cds3007;Parent=gene3065;Dbxref=Genbank:NP_627268.1,GeneID:1098480;Name=NP_627268.1;Note=SCBAC19G2.02%2C possible membrane protein%2C len: 524aa: similar to many eg. neighbouring gene TR:Q9KZK3 (EMBL:AL353862) SCE34.23 transcriptional regulator (396 aa) fasta scores%3B opt: 631%2C Z-score: 610.7%2C 36.011%25 identity (38.235%25 ungapped) in 361 aa overlap and TR:O68907 (EMBL:AF058302) FrnA from polyketide antibiotic frenolicin biosynthetic cluster of Streptomyces roseofulvus (770 aa) fasta scores%3B opt: 482%2C Z-score: 464.5%2C 28.387%25 identity (32.195%25 ungapped) in 465 aa overlap. Contains possible membrane-spanning hydrophobic region. Also has region of similarity with adjacent CDS SCBAC19F3.03c.;gbkey=CDS;gene=SCBAC19G2.02;product=hypothetical protein;protein_id=NP_627268.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3338598	3338988	.	+	.	ID=id3799;Dbxref=GeneID:1098480;Note=Inverted and repeated at 2796..3186;gbkey=repeat_region;gene=SCBAC19G2.02
NC_003888.3	RefSeq	gene	3339882	3341075	.	-	.	ID=gene3066;Dbxref=GeneID:1098481;Name=SCBAC19G2.03c;gbkey=Gene;gene=SCBAC19G2.03c;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.03c;locus_tag=SCO3048
NC_003888.3	RefSeq	CDS	3339882	3341075	.	-	0	ID=cds3008;Parent=gene3066;Dbxref=Genbank:NP_627269.1,GeneID:1098481;Name=NP_627269.1;Note=SCBAC19G2.03c%2C possible membrane protein%2C len: 397aa: similar to TR:O69850 (EMBL:AL023702) transcriptional regulator from Streptomyces coelicolor (366 aa) fasta scores%3B opt: 615%2C Z-score: 578.6%2C 34.694%25 identity (37.072%25 ungapped) in 343 aa overlap. Contains possible membrane-spanning hydrophobic region. Also has region of similarity with adjacent CDS SCBAC19F3.02.;gbkey=CDS;gene=SCBAC19G2.03c;product=hypothetical protein;protein_id=NP_627269.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3340342	3340732	.	-	.	ID=id3800;Dbxref=GeneID:1098481;Note=Inveretd and repeated at 1052..1442;gbkey=repeat_region;gene=SCBAC19G2.03c
NC_003888.3	RefSeq	gene	3341259	3341852	.	+	.	ID=gene3067;Dbxref=GeneID:1098482;Name=SCBAC19G2.04;gbkey=Gene;gene=SCBAC19G2.04;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.04;locus_tag=SCO3049
NC_003888.3	RefSeq	CDS	3341259	3341852	.	+	0	ID=cds3009;Parent=gene3067;Dbxref=Genbank:NP_627270.1,GeneID:1098482;Name=NP_627270.1;Note=SCBAC19G2.04%2C possible acyl-CoA hydrolase%2C len: 197 aa: similar to many e.g. SW:Q64559 (CTE2_RAT) rat brain cytosolic acyl-coenzyme A thioester hydrolase (338 aa) fasta scores%3B opt: 353%2C Z-score: 394.1%2C 34.973%25 identity (35.754%25 ungapped) in 183 aa overlap and TR:Q9I0E9 (EMBL:AE004697) hypothetical protein from Pseudomonas aeruginosa (166 aa) fasta scores%3B opt: 391%2C Z-score: 440.1%2C 42.949%25 identity (44.667%25 ungapped) in 156 aa overlap. Contains Pfam match to entry PF01662 Acyl-CoA_hydro%2C Cytosolic long-chain acyl-CoA thioester hydrolase.;gbkey=CDS;gene=SCBAC19G2.04;product=acyl-CoA thioesterase;protein_id=NP_627270.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3341304	3341732	.	+	.	ID=id3801;Dbxref=GeneID:1098482;Note=Pfam match to entry PF01662 Acyl-CoA_hydro%2C Cytosolic long-chain acyl-CoA thioester hydrolase%2C score 131.40%2C E-value 1.6e-35;gbkey=misc_feature;gene=SCBAC19G2.04
NC_003888.3	RefSeq	gene	3341888	3342928	.	-	.	ID=gene3068;Dbxref=GeneID:1098483;Name=SCBAC19G2.05c;gbkey=Gene;gene=SCBAC19G2.05c;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.05c;locus_tag=SCO3050
NC_003888.3	RefSeq	CDS	3341888	3342928	.	-	0	ID=cds3010;Parent=gene3068;Dbxref=Genbank:NP_627271.1,GeneID:1098483;Name=NP_627271.1;Note=SCBAC19G2.05c%2C unknown%2C len: 346aa: no significant database matches.;gbkey=CDS;gene=SCBAC19G2.05c;product=hypothetical protein;protein_id=NP_627271.1;transl_table=11
NC_003888.3	RefSeq	gene	3343070	3344227	.	-	.	ID=gene3069;Dbxref=GeneID:1098484;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;gene_synonym=fadE,SCBAC19G2.06c;locus_tag=SCO3051
NC_003888.3	RefSeq	CDS	3343070	3344227	.	-	0	ID=cds3011;Parent=gene3069;Dbxref=Genbank:NP_627272.1,GeneID:1098484;Name=NP_627272.1;Note=SCBAC19G2.06c%2C fadE%2C acyl-CoA dehydrogenase%2C len: 385 aa: similar to many e.g. TR:Q9RIQ5 (EMBL:AJ250495) fatty acid acyl CoA dehydrogenase FadE from Streptomyces lividans (385 aa) fasta scores%3B opt: 2480%2C Z-score: 2753.5%2C 99.740%25 identity (99.740%25 ungapped) in 385 aa overlap and SW:P45867 (ACDA_BACSU) acyl CoA dehydrogenase from Bacillus subtilis (379 aa) fasta scores%3B opt: 1214%2C Z-score: 1351.1%2C 53.600%25 identity (54.472%25 ungapped) in 375 aa overlap. Also similar to TR:Q9RKY7 (EMBL:AL133213) SC6D7.11 Acd acyl CoA dehydrogenase from Streptomyces coelicolor (391 aa) fasta scores%3B opt: 1079%2C Z-score: 1201.3%2C 47.244%25 identity (48.387%25 ungapped) in 381 aa overlap. Contains Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C C-terminal domain%3B Pfam match to entry PF02770 Acyl-CoA_dh_M%2C Acyl-CoA dehydrogenase%2C middle domain%3B Pfam match to entry PF02771 Acyl-CoA_dh_N%2C Acyl-CoA dehydrogenase%2C N-terminal domain%3B Prosite match to PS00072 Acyl-CoA dehydrogenases signature 1 and Prosite match to PS00073 Acyl-CoA dehydrogenases signature 2.;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=NP_627272.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3343073	3343525	.	-	.	ID=id3802;Dbxref=GeneID:1098484;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C C-terminal domain%2C score 294.60%2C E-value 1.2e-84;gbkey=misc_feature;gene=fadE
NC_003888.3	RefSeq	sequence_feature	3343142	3343201	.	-	.	ID=id3803;Dbxref=GeneID:1098484;Note=PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=misc_feature;gene=fadE
NC_003888.3	RefSeq	sequence_feature	3343535	3343840	.	-	.	ID=id3804;Dbxref=GeneID:1098484;Note=Pfam match to entry PF02770 Acyl-CoA_dh_M%2C Acyl-CoA dehydrogenase%2C middle domain%2C score 187.70%2C E-value 1.9e-52;gbkey=misc_feature;gene=fadE
NC_003888.3	RefSeq	sequence_feature	3343802	3343840	.	-	.	ID=id3805;Dbxref=GeneID:1098484;Note=PS00072 Acyl-CoA dehydrogenases signature 1;gbkey=misc_feature;gene=fadE
NC_003888.3	RefSeq	sequence_feature	3343844	3344191	.	-	.	ID=id3806;Dbxref=GeneID:1098484;Note=Pfam match to entry PF02771 Acyl-CoA_dh_N%2C Acyl-CoA dehydrogenase%2C N-terminal domain%2C score 159.70%2C E-value 5e-44;gbkey=misc_feature;gene=fadE
NC_003888.3	RefSeq	gene	3344420	3345763	.	+	.	ID=gene3070;Dbxref=GeneID:1098485;Name=SCBAC19G2.07;gbkey=Gene;gene=SCBAC19G2.07;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.07;locus_tag=SCO3052
NC_003888.3	RefSeq	CDS	3344420	3345763	.	+	0	ID=cds3012;Parent=gene3070;Dbxref=Genbank:NP_627273.1,GeneID:1098485;Name=NP_627273.1;Note=SCBAC19G2.07%2C probable UDP-glucose 6-dehydrogenase%2C len: 447aa: similar to many eg. SW:O54068 (UDG_RHIME) UDP-glucose 6-dehydrogenase RkpK from Rhizobium meliloti EC:1.1.1.22 (437 aa) fasta scores%3B opt: 1101%2C Z-score: 1198.1%2C 43.080%25 identity (44.780%25 ungapped) in 448 aa overlap. Contains Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family.;gbkey=CDS;gene=SCBAC19G2.07;product=UDP-glucose 6-dehydrogenase;protein_id=NP_627273.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3344426	3345706	.	+	.	ID=id3807;Dbxref=GeneID:1098485;Note=Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family%2C score 595.40%2C E-value 3.5e-175;gbkey=misc_feature;gene=SCBAC19G2.07
NC_003888.3	RefSeq	stem_loop	3345748	3345815	.	+	.	ID=id3808;Note=Score 52: 24/29 ( 82%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3345819	3347939	.	-	.	ID=gene3071;Dbxref=GeneID:1098486;Name=SCBAC19G2.08c;gbkey=Gene;gene=SCBAC19G2.08c;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.08c;locus_tag=SCO3053
NC_003888.3	RefSeq	CDS	3345819	3347939	.	-	0	ID=cds3013;Parent=gene3071;Dbxref=Genbank:NP_627274.1,GeneID:1098486;Name=NP_627274.1;Note=SCBAC19G2.08c%2C possible  esterase%2C len: 706 aa: similar to many from streptomycetes e.g. TR:Q54345 (EMBL:Z50108) FusH fusidic acid inactivating esterase from Streptomyces lividans 66 (509 aa) fasta scores%3B opt: 821%2C Z-score: 876.2%2C 36.782%25 identity (40.592%25 ungapped) in 522 aa overlap and TR:Q9ADF5 (EMBL:AL589708)  esterase FusH from Streptomyces coelicolor (520 aa) fasta scores: opt: 816 Z-score: 872.0 E(): 6.4e-41%3B 36.154%25 identity in 520 aa overlap. Contains a possible non-cleavable N-terminal signal sequence%3B Pfam match to entry PF01453 Agglutinin%2C Lectin (probable mannose binding)%3B Pfam match to entry PF00089 trypsin%2C Trypsin and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. C-terminal region contains a degenerate repeat sequence. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC19G2.08c;product=esterase;protein_id=NP_627274.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3345988	3346877	.	+	.	ID=id3809;Note=Contains a multiple gapped repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	3346890	3347216	.	-	.	ID=id3810;Dbxref=GeneID:1098486;Note=Pfam match to entry PF01453 Agglutinin%2C Lectin (probable mannose binding)%2C score 32.40%2C E-value 1.1e-05;gbkey=misc_feature;gene=SCBAC19G2.08c
NC_003888.3	RefSeq	sequence_feature	3347304	3347771	.	-	.	ID=id3811;Dbxref=GeneID:1098486;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 51.20%2C E-value 2.1e-15;gbkey=misc_feature;gene=SCBAC19G2.08c
NC_003888.3	RefSeq	sequence_feature	3347871	3347903	.	-	.	ID=id3812;Dbxref=GeneID:1098486;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCBAC19G2.08c
NC_003888.3	RefSeq	stem_loop	3348251	3348298	.	+	.	ID=id3813;Note=Score 59: 21/22 ( 95%25) matches%2C 0 gaps;gbkey=stem_loop;partial=true;start_range=.,3348251
NC_003888.3	RefSeq	gene	3348346	3348852	.	-	.	ID=gene3072;Dbxref=GeneID:1098487;Name=SCBAC19G2.09c;gbkey=Gene;gene=SCBAC19G2.09c;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.09c;locus_tag=SCO3054
NC_003888.3	RefSeq	CDS	3348346	3348852	.	-	0	ID=cds3014;Parent=gene3072;Dbxref=Genbank:NP_627275.1,GeneID:1098487;Name=NP_627275.1;Note=SCBAC19G2.09c%2C conserved hypothetical protein%2C len: 168aa: similar to many in Streptomyces coelicolor eg. TR:Q9F2X0 (EMBL:AL392148) SCD20.09 hypothetical protein (190 aa) fasta scores%3B opt: 250%2C Z-score: 285.6%2C 34.503%25 identity (38.816%25 ungapped) in 171 aa overlap.;gbkey=CDS;gene=SCBAC19G2.09c;product=hypothetical protein;protein_id=NP_627275.1;transl_table=11
NC_003888.3	RefSeq	gene	3348964	3349323	.	+	.	ID=gene3073;Dbxref=GeneID:1098488;Name=SCBAC19G2.10;gbkey=Gene;gene=SCBAC19G2.10;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.10;locus_tag=SCO3055
NC_003888.3	RefSeq	CDS	3348964	3349323	.	+	0	ID=cds3015;Parent=gene3073;Dbxref=Genbank:NP_627276.1,GeneID:1098488;Name=NP_627276.1;Note=SCBAC19G2.10%2C conserved hypothetical protein%2C len: 119aa: similar to many in Streptomyces coelicolor e.g. TR:O85701 (EMBL:AF072709) 3SCF60.11c conserved hypothetical protein (131 aa) fasta scores%3B opt: 322%2C Z-score: 387.9%2C 42.017%25 identity in 119 aa overlap and downstream neighbouring CDS SCBAC19G2.11;gbkey=CDS;gene=SCBAC19G2.10;product=hypothetical protein;protein_id=NP_627276.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3348986	3349314	.	+	.	ID=id3814;Dbxref=GeneID:1098488;Note=Directly repeated at 11832..12181;gbkey=repeat_region;gene=SCBAC19G2.10
NC_003888.3	RefSeq	gene	3349353	3349745	.	+	.	ID=gene3074;Dbxref=GeneID:1098489;Name=SCBAC19G2.11;gbkey=Gene;gene=SCBAC19G2.11;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.11;locus_tag=SCO3056
NC_003888.3	RefSeq	CDS	3349353	3349745	.	+	0	ID=cds3016;Parent=gene3074;Dbxref=Genbank:NP_627277.1,GeneID:1098489;Name=NP_627277.1;Note=SCBAC19G2.11%2C conserved hypothetical protein%2C len: aa: similar to many in Streptomyces coelicolor eg. TR:Q9F3E9 (EMBL:AL450289) SC2H2.06 hypothetical protein (150 aa) fasta scores%3B opt: 340%2C Z-score: 415.4%2C 46.032%25 identity in 126 aa overlap and upstream neighbouring CDS SCBAC19G2.10;gbkey=CDS;gene=SCBAC19G2.11;product=hypothetical protein;protein_id=NP_627277.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3349378	3349727	.	+	.	ID=id3815;Dbxref=GeneID:1098489;Note=Directly repeated at 11440..11768;gbkey=repeat_region;gene=SCBAC19G2.11
NC_003888.3	RefSeq	gene	3349758	3350888	.	-	.	ID=gene3075;Dbxref=GeneID:1098490;Name=SCBAC19G2.12c;gbkey=Gene;gene=SCBAC19G2.12c;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.12c;locus_tag=SCO3057
NC_003888.3	RefSeq	CDS	3349758	3350888	.	-	0	ID=cds3017;Parent=gene3075;Dbxref=Genbank:NP_627278.1,GeneID:1098490;Name=NP_627278.1;Note=SCBAC19G2.12c%2C possible dipeptidase%2C len: 376 aa: similar to many eukaryotic peptidases e.g. SW:P31430 (MDP1_RAT) rat renal dipeptidase (410 aa) fasta scores%3B opt: 440%2C Z-score: 474.0%2C 36.056%25 identity (38.906%25 ungapped) in 355 aa overlap. Also weakly similar to TR:Q9KH70 (EMBL:AF268476) thermostable dipeptidase from Brevibacillus borstelensis (307 aa) fasta scores%3B opt: 273%2C Z-score: 298.4%2C 28.159%25 identity (30.116%25 ungapped) in 277 aa overlap. Contains Pfam match to entry PF01244 Renal_dipeptase%2C Renal dipeptidase. Also similar to neighbouring upstream CDS SCBAC19G2.13c;gbkey=CDS;gene=SCBAC19G2.12c;product=dipeptidase;protein_id=NP_627278.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3349761	3350816	.	-	.	ID=id3816;Dbxref=GeneID:1098490;Note=Pfam match to entry PF01244 Renal_dipeptase%2C Renal dipeptidase%2C score 121.70%2C E-value 1.4e-32;gbkey=misc_feature;gene=SCBAC19G2.12c
NC_003888.3	RefSeq	repeat_region	3349762	3350843	.	-	.	ID=id3817;Dbxref=GeneID:1098490;Note=Degenerately%2C directly repeated at 13490..14610;gbkey=repeat_region;gene=SCBAC19G2.12c
NC_003888.3	RefSeq	gene	3351008	3352210	.	-	.	ID=gene3076;Dbxref=GeneID:1098491;Name=SCBAC19G2.13c;gbkey=Gene;gene=SCBAC19G2.13c;gene_biotype=protein_coding;gene_synonym=SCBAC19G2.13c;locus_tag=SCO3058
NC_003888.3	RefSeq	CDS	3351008	3352210	.	-	0	ID=cds3018;Parent=gene3076;Dbxref=Genbank:NP_627279.1,GeneID:1098491;Name=NP_627279.1;Note=SCBAC19G2.13c%2C possible dipeptidase%2C len: 400 aa: similar to many eukaryotic peptidases e.g. SW:P31429 (MDP1_RABIT) rabbit renal dipeptidase (410 aa) fasta scores%3B opt: 788%2C Z-score: 879.1%2C 42.432%25 identity (48.580%25 ungapped) in 403 aa overlap. Also weakly similar to TR:Q9KH70 (EMBL:AF268476) thermostable dipeptidase from Brevibacillus borstelensis (307 aa) fasta scores%3B opt: 450%2C Z-score: 506.1%2C 31.034%25 identity (36.486%25 ungapped) in 348 aa overlap. Contains Pfam match to entry PF01244 Renal_dipeptase%2C Renal dipeptidase. Also similar to neighbouring downstream CDS SCBAC19G2.12c;gbkey=CDS;gene=SCBAC19G2.13c;product=dipeptidase;protein_id=NP_627279.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3351020	3352210	.	-	.	ID=id3818;Dbxref=GeneID:1098491;Note=Pfam match to entry PF01244 Renal_dipeptase%2C Renal dipeptidase%2C score 280.40%2C E-value 2.3e-80;gbkey=misc_feature;gene=SCBAC19G2.13c
NC_003888.3	RefSeq	repeat_region	3351036	3352156	.	-	.	ID=id3819;Dbxref=GeneID:1098491;Note=Degenerately%2C directly repeated at 12216..13297;gbkey=repeat_region;gene=SCBAC19G2.13c
NC_003888.3	RefSeq	gene	3352225	3352767	.	-	.	ID=gene3077;Dbxref=GeneID:1098492;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;gene_synonym=purE,SCBAC19G2.14c;locus_tag=SCO3059
NC_003888.3	RefSeq	CDS	3352225	3352767	.	-	0	ID=cds3019;Parent=gene3077;Dbxref=Genbank:NP_627280.1,GeneID:1098492;Name=NP_627280.1;Note=SCBAC19G2.14c%2C phosphoribosylaminoimidazole carboxylase catalytic subunit PurE%2C len: 180aa: strongly similar to many eg. SW:Q44679 (PUR6_CORAM) phosphoribosylaminoimidazole carboxylase catalytic subunit PurE from Corynebacterium ammoniagenes (177 aa) fasta scores%3B opt: 666%2C Z-score: 735.8%2C 65.541%25 identity (65.541%25 ungapped) in 148 aa overlap and TR:O80937 (EMBL:AC004684) phosphoribosylaminoimidazole carboxylase from Arabidopsis thaliana (645 aa) fasta scores%3B opt: 644%2C Z-score: 703.2%2C 60.870%25 identity (60.870%25 ungapped) in 161 aa overlap. Contains Pfam match to entry PF00731 AIRC%2C AIR carboxylase.;gbkey=CDS;gene=purE;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=NP_627280.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3352273	3352743	.	-	.	ID=id3820;Dbxref=GeneID:1098492;Note=Pfam match to entry PF00731 AIRC%2C AIR carboxylase%2C score 309.80%2C E-value 3.1e-89;gbkey=misc_feature;gene=purE
NC_003888.3	RefSeq	gene	3352764	3353999	.	-	.	ID=gene3078;Dbxref=GeneID:1098493;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;gene_synonym=purK,SCBAC19G2.15c,SCE25.01c;locus_tag=SCO3060
NC_003888.3	RefSeq	CDS	3352764	3353999	.	-	0	ID=cds3020;Parent=gene3078;Dbxref=Genbank:NP_733591.1,GeneID:1098493;Name=NP_733591.1;Note=With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purK;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=NP_733591.1;transl_table=11
NC_003888.3	RefSeq	gene	3354084	3354656	.	+	.	ID=gene3079;Dbxref=GeneID:1098494;Name=SCE25.02;gbkey=Gene;gene=SCE25.02;gene_biotype=protein_coding;gene_synonym=SCE25.02;locus_tag=SCO3061
NC_003888.3	RefSeq	CDS	3354084	3354656	.	+	0	ID=cds3021;Parent=gene3079;Dbxref=Genbank:NP_627281.1,GeneID:1098494;Name=NP_627281.1;Note=SCE25.02%2C possible integral membrane protein%2C len: 190 aa%3B similar to TR:P96882 (EMBL:Z92771) Mycobacterium tuberculosis hypothetical 30.1 kD protein MTCY71.17%2C 272 aa%3B fasta scores: opt: 197 z-score: 245.6 E(): 3.2e-06%3B 32.0%25 identity in 150 aa overlap. Contains possible hydrophobis membrane spanning regions;gbkey=CDS;gene=SCE25.02;product=hypothetical protein;protein_id=NP_627281.1;transl_table=11
NC_003888.3	RefSeq	gene	3354681	3355955	.	-	.	ID=gene3080;Dbxref=GeneID:1098495;Name=SCE25.03c;gbkey=Gene;gene=SCE25.03c;gene_biotype=protein_coding;gene_synonym=SCE25.03c;locus_tag=SCO3062
NC_003888.3	RefSeq	CDS	3354681	3355955	.	-	0	ID=cds3022;Parent=gene3080;Dbxref=Genbank:NP_627282.1,GeneID:1098495;Name=NP_627282.1;Note=SCE25.03c%2C probable two-component system histidine kinase%2C len: 424 aa%3B similar to TR:O86661 (EMBL:AL031182) Streptomyces coelicolor two-component sensor SC4A2.05%2C 436 aa%3B fasta scores: opt: 486 z-score: 535.4 E(): 2.3e-22%3B 31.8%25 identity in 450 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE25.03c;product=two-component system histidine kinase;protein_id=NP_627282.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3354735	3355322	.	-	.	ID=id3821;Dbxref=GeneID:1098495;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 74.70%2C E-value 1.9e-18;gbkey=misc_feature;gene=SCE25.03c
NC_003888.3	RefSeq	ribosome_entry_site	3355957	3355962	.	-	.	ID=id3822;gbkey=RBS
NC_003888.3	RefSeq	gene	3355990	3356667	.	-	.	ID=gene3081;Dbxref=GeneID:1098496;Name=SCE25.04c;gbkey=Gene;gene=SCE25.04c;gene_biotype=protein_coding;gene_synonym=SCE25.04c;locus_tag=SCO3063
NC_003888.3	RefSeq	CDS	3355990	3356667	.	-	0	ID=cds3023;Parent=gene3081;Dbxref=Genbank:NP_627283.1,GeneID:1098496;Name=NP_627283.1;Note=SCE25.04c%2C probable two-component system reponse regulator%2C len: 225 aa%3B similar to TR:CAB77324 (EMBL:AL160331) Streptomyces coelicolor response regulator SCD8A.03%2C 223 aa%3B fasta scores: opt: 688 z-score: 781.9 E(): 0%3B 48.9%25 identity in 223 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=SCE25.04c;product=two-component system reponse regulator;protein_id=NP_627283.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3356011	3356229	.	-	.	ID=id3823;Dbxref=GeneID:1098496;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 123.90%2C E-value 8.7e-36;gbkey=misc_feature;gene=SCE25.04c
NC_003888.3	RefSeq	sequence_feature	3356329	3356664	.	-	.	ID=id3824;Dbxref=GeneID:1098496;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 136.00%2C E-value 6.7e-37;gbkey=misc_feature;gene=SCE25.04c
NC_003888.3	RefSeq	gene	3357162	3358658	.	+	.	ID=gene3082;Dbxref=GeneID:1098497;Name=SCE25.05;gbkey=Gene;gene=SCE25.05;gene_biotype=protein_coding;gene_synonym=SCE25.05;locus_tag=SCO3064
NC_003888.3	RefSeq	CDS	3357162	3358658	.	+	0	ID=cds3024;Parent=gene3082;Dbxref=Genbank:NP_627284.1,GeneID:1098497;Name=NP_627284.1;Note=SCE25.05%2C probable peptide transporter%2C len: 498 aa%3B similar to SW:DTPT_LACLA (EMBL:U05215) Lactococcus lactis di-/tripeptide transporter DtpT%2C 463 aa%3B fasta scores: opt: 1105 z-score: 1248.4 E(): 0%3B 38.2%25 identity in 468 aa overlap. Contains Pfam match to entry PF00854 PTR2%2C POT family and match to Prosite entry PS01023 PTR2 family proton/oligopeptide symporters signature 2 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE25.05;product=peptide transporter;protein_id=NP_627284.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3357444	3358511	.	+	.	ID=id3825;Dbxref=GeneID:1098497;Note=Pfam match to entry PF00854 PTR2%2C POT family%2C score 192.30%2C E-value 1.8e-56;gbkey=misc_feature;gene=SCE25.05
NC_003888.3	RefSeq	sequence_feature	3357633	3357671	.	+	.	ID=id3826;Dbxref=GeneID:1098497;Note=PS01023 PTR2 family proton/oligopeptide symporters signature 2;gbkey=misc_feature;gene=SCE25.05
NC_003888.3	RefSeq	gene	3358788	3359225	.	+	.	ID=gene3083;Dbxref=GeneID:1098498;Name=SCE25.06;gbkey=Gene;gene=SCE25.06;gene_biotype=protein_coding;gene_synonym=SCE25.06;locus_tag=SCO3065
NC_003888.3	RefSeq	CDS	3358788	3359225	.	+	0	ID=cds3025;Parent=gene3083;Dbxref=Genbank:NP_627285.1,GeneID:1098498;Name=NP_627285.1;Note=SCE25.06%2C hypothetical protein%2C len: 145 aa%3B similar to TR:CAB86125 (EMBL:AL163003) Streptomyces coelicolor hypothetical 16.0 kD protein%2C SCC24.31c%2C 142 aa%3B fasta scores: opt: 338 z-score: 419.4 E(): 6.6e-16%3B 42.6%25 identity in 141 aa overlap;gbkey=CDS;gene=SCE25.06;product=hypothetical protein;protein_id=NP_627285.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3359155	3361634	.	+	.	ID=id3827;Note=previously sequenced fragment EMBL:AJ249581 Streptomyces coelicolor A3(2) sig15 gene%2C ORFB and ORFA;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3359355	3359867	.	-	.	ID=gene3084;Dbxref=GeneID:1098499;Name=SCE25.07c;gbkey=Gene;gene=SCE25.07c;gene_biotype=protein_coding;gene_synonym=SCE25.07c;locus_tag=SCO3066
NC_003888.3	RefSeq	CDS	3359355	3359867	.	-	0	ID=cds3026;Parent=gene3084;Dbxref=Genbank:NP_627286.1,GeneID:1098499;Name=NP_627286.1;Note=SCE25.07c%2C regulator of Sig15%2C len: 170 aa%3B identical to previously sequenced TR:CAB55834 (EMBL:AJ249581) Streptomyces coelicolor A3(2) regulator of Sig15%2C 170 aa;gbkey=CDS;gene=SCE25.07c;product=regulator of Sig15;protein_id=NP_627286.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3359876	3359881	.	-	.	ID=id3828;gbkey=RBS
NC_003888.3	RefSeq	gene	3360064	3360441	.	-	.	ID=gene3085;Dbxref=GeneID:1098500;Name=SCE25.08c;gbkey=Gene;gene=SCE25.08c;gene_biotype=protein_coding;gene_synonym=SCE25.08c;locus_tag=SCO3067
NC_003888.3	RefSeq	CDS	3360064	3360441	.	-	0	ID=cds3027;Parent=gene3085;Dbxref=Genbank:NP_627287.1,GeneID:1098500;Name=NP_627287.1;Note=SCE25.08c%2C anti anti sigma factor%2C len: 125 aa%3B identical to previously sequenced TR:CAB55835 (EMBL:AJ249581) Streptomyces coelicolor A3(2) anti anti sigma factor%2C 125 aa. Contains Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family;gbkey=CDS;gene=SCE25.08c;product=anti anti sigma factor;protein_id=NP_627287.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3360085	3360405	.	-	.	ID=id3829;Dbxref=GeneID:1098500;Note=Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family%2C score 91.40%2C E-value 1.8e-23;gbkey=misc_feature;gene=SCE25.08c
NC_003888.3	RefSeq	ribosome_entry_site	3360449	3360456	.	-	.	ID=id3830;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3360684	3360689	.	+	.	ID=id3831;gbkey=RBS
NC_003888.3	RefSeq	gene	3360694	3361608	.	+	.	ID=gene3086;Dbxref=GeneID:1098501;Name=SCE25.09;gbkey=Gene;gene=SCE25.09;gene_biotype=protein_coding;gene_synonym=SCE25.09,sig15;locus_tag=SCO3068
NC_003888.3	RefSeq	CDS	3360694	3361608	.	+	0	ID=cds3028;Parent=gene3086;Dbxref=Genbank:NP_627288.1,GeneID:1098501;Name=NP_627288.1;Note=SCE25.09%2C sig15%2C RNA polymerase sigma factor%2C len: 304 aa%3B identical to previously sequenced TR:CAB55836 (EMBL:AJ249581) Streptomyces coelicolor A3(2) RNA polymerase sigma factor Sig15%2C 304 aa. Contains Pfam match to entry PF00140 sigma70%2C Sigma-70 factor and match to Prosite entry PS00715 Sigma-70 factors family signature 1. Contains also possible helix-turn-helix motif at residues 269..290 (+6.83 SD);gbkey=CDS;gene=SCE25.09;product=RNA polymerase sigma factor;protein_id=NP_627288.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3360922	3361587	.	+	.	ID=id3832;Dbxref=GeneID:1098501;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 250.90%2C E-value 1.8e-71;gbkey=misc_feature;gene=SCE25.09
NC_003888.3	RefSeq	sequence_feature	3361012	3361053	.	+	.	ID=id3833;Dbxref=GeneID:1098501;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=SCE25.09
NC_003888.3	RefSeq	stem_loop	3361630	3361671	.	+	.	ID=id3834;Note=8735 CCTGAAGGGGGGCGACCCG 8753 - 8758 CGGGCGCCCCCCTTCAGG 8776. Score 50: 18/19 (94%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3361685	3362029	.	-	.	ID=gene3087;Dbxref=GeneID:1098502;Name=SCE25.10c;gbkey=Gene;gene=SCE25.10c;gene_biotype=protein_coding;gene_synonym=SCE25.10c;locus_tag=SCO3069
NC_003888.3	RefSeq	CDS	3361685	3362029	.	-	0	ID=cds3029;Parent=gene3087;Dbxref=Genbank:NP_627289.1,GeneID:1098502;Name=NP_627289.1;Note=SCE25.10c%2C possible integral membrane protein%2C len: 114 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE25.10c;product=hypothetical protein;protein_id=NP_627289.1;transl_table=11
NC_003888.3	RefSeq	gene	3362037	3363212	.	-	.	ID=gene3088;Dbxref=GeneID:1098503;Name=SCE25.11c;gbkey=Gene;gene=SCE25.11c;gene_biotype=protein_coding;gene_synonym=SCE25.11c;locus_tag=SCO3070
NC_003888.3	RefSeq	CDS	3362037	3363212	.	-	0	ID=cds3030;Parent=gene3088;Dbxref=Genbank:NP_627290.1,GeneID:1098503;Name=NP_627290.1;Note=catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;gene=SCE25.11c;product=imidazolonepropionase;protein_id=NP_627290.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3362052	3362840	.	-	.	ID=id3835;Dbxref=GeneID:1098503;Note=Pfam match to entry PF01685 ATZ_TRZ%2C Chlorohydrolase%2C score -55.70%2C E-value 4e-05;gbkey=misc_feature;gene=SCE25.11c
NC_003888.3	RefSeq	gene	3363269	3364618	.	-	.	ID=gene3089;Dbxref=GeneID:1098504;Name=SCE25.12c;gbkey=Gene;gene=SCE25.12c;gene_biotype=protein_coding;gene_synonym=SCE25.12c;locus_tag=SCO3071
NC_003888.3	RefSeq	CDS	3363269	3364618	.	-	0	ID=cds3031;Parent=gene3089;Dbxref=Genbank:NP_627291.1,GeneID:1098504;Name=NP_627291.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;gene=SCE25.12c;product=N-formimino-L-glutamate deiminase;protein_id=NP_627291.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3363356	3364285	.	-	.	ID=id3836;Dbxref=GeneID:1098504;Note=Pfam match to entry PF01685 ATZ_TRZ%2C Chlorohydrolase%2C score 165.50%2C E-value 9e-46;gbkey=misc_feature;gene=SCE25.12c
NC_003888.3	RefSeq	gene	3364615	3365832	.	-	.	ID=gene3090;Dbxref=GeneID:1098505;Name=SCE25.13c;gbkey=Gene;gene=SCE25.13c;gene_biotype=protein_coding;gene_synonym=SCE25.13c;locus_tag=SCO3072
NC_003888.3	RefSeq	CDS	3364615	3365832	.	-	0	ID=cds3032;Parent=gene3090;Dbxref=Genbank:NP_627292.1,GeneID:1098505;Name=NP_627292.1;Note=allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar%3B the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia%3B carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids%2C ammonia%2C and carbon dioxide;gbkey=CDS;gene=SCE25.13c;product=allantoate amidohydrolase;protein_id=NP_627292.1;transl_table=11
NC_003888.3	RefSeq	gene	3365829	3367547	.	-	.	ID=gene3091;Dbxref=GeneID:1098506;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;gene_synonym=hutU,SCE25.14c;locus_tag=SCO3073
NC_003888.3	RefSeq	CDS	3365829	3367547	.	-	0	ID=cds3033;Parent=gene3091;Dbxref=Genbank:NP_627293.1,GeneID:1098506;Name=NP_627293.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;gene=hutU;product=urocanate hydratase;protein_id=NP_627293.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3365842	3365846	.	-	.	ID=id3837;Dbxref=GeneID:1098506;gbkey=RBS;gene=hutU
NC_003888.3	RefSeq	sequence_feature	3365898	3367547	.	-	.	ID=id3838;Dbxref=GeneID:1098506;Note=Pfam match to entry PF01175 Urocanase%2C Urocanase%2C score 1044.60%2C E-value 0;gbkey=misc_feature;gene=hutU
NC_003888.3	RefSeq	sequence_feature	3366330	3366359	.	-	.	ID=id3839;Dbxref=GeneID:1098506;Note=PS01233 Urocanase active site;gbkey=misc_feature;gene=hutU
NC_003888.3	RefSeq	ribosome_entry_site	3367554	3367559	.	-	.	ID=id3840;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	3367657	3367692	.	+	.	ID=id3841;Note=14762 CGAGCGCGGGCCCCG 14778 - 14781 CGGGGGCCCGCGCTCG 14979. Score 51: 17/17 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3367747	3368334	.	-	.	ID=gene3092;Dbxref=GeneID:1098507;Name=SCE25.15c;gbkey=Gene;gene=SCE25.15c;gene_biotype=protein_coding;gene_synonym=SCE25.15c;locus_tag=SCO3074
NC_003888.3	RefSeq	CDS	3367747	3368334	.	-	0	ID=cds3034;Parent=gene3092;Dbxref=Genbank:NP_627294.1,GeneID:1098507;Name=NP_627294.1;Note=SCE25.15c%2C possible integral membrane protein%2C len: 195 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE25.15c;product=hypothetical protein;protein_id=NP_627294.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3368341	3368346	.	-	.	ID=id3842;gbkey=RBS
NC_003888.3	RefSeq	gene	3368495	3369364	.	-	.	ID=gene3093;Dbxref=GeneID:1098508;Name=SCE25.16c;gbkey=Gene;gene=SCE25.16c;gene_biotype=protein_coding;gene_synonym=SCE25.16c;locus_tag=SCO3075
NC_003888.3	RefSeq	CDS	3368495	3369364	.	-	0	ID=cds3035;Parent=gene3093;Dbxref=Genbank:NP_627295.1,GeneID:1098508;Name=NP_627295.1;Note=SCE25.16c%2C possible transcriptional regulator%2C len: 289 aa%3B similar to SW:HEXR_PSEAE (EMBL:AF029673) Pseudomonas aeruginosa hex regulon repressor HexR%2C 285 aa%3B fasta scores: opt: 197 z-score: 227.5 E(): 3.2e-05%3B 27.7%25 identity in 220 aa overlap. Contains possible helix-turn-helix motif at residues 50..71 (+2.54 SD);gbkey=CDS;gene=SCE25.16c;product=transcriptional regulator;protein_id=NP_627295.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3369375	3369378	.	-	.	ID=id3843;gbkey=RBS
NC_003888.3	RefSeq	gene	3369483	3369953	.	+	.	ID=gene3094;Dbxref=GeneID:1098509;Name=SCE25.17;gbkey=Gene;gene=SCE25.17;gene_biotype=protein_coding;gene_synonym=SCE25.17;locus_tag=SCO3076
NC_003888.3	RefSeq	CDS	3369483	3369953	.	+	0	ID=cds3036;Parent=gene3094;Dbxref=Genbank:NP_627296.1,GeneID:1098509;Name=NP_627296.1;Note=SCE25.17%2C possible integral membrane protein%2C len: 156 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE25.17;product=hypothetical protein;protein_id=NP_627296.1;transl_table=11
NC_003888.3	RefSeq	gene	3370359	3371744	.	-	.	ID=gene3095;Dbxref=GeneID:1098510;Name=SCE25.18c;gbkey=Gene;gene=SCE25.18c;gene_biotype=protein_coding;gene_synonym=SCE25.18c;locus_tag=SCO3077
NC_003888.3	RefSeq	CDS	3370359	3371744	.	-	0	ID=cds3037;Parent=gene3095;Dbxref=Genbank:NP_627297.1,GeneID:1098510;Name=NP_627297.1;Note=SCE25.18%2C probable cystathionine beta-synthase%2C len: 461 aa%3B highly similar to TR:O53425 (EMBL:AL021897) Mycobacterium tuberculosis cystathionine beta-synthase CysM%2C 464 aa%3B fasta scores: opt: 2025 z-score: 2184.8 E(): 0%3B 67.6%25 identity in 454 aa overlap%2C to TR:Q9YHU3 (EMBL:AF090120) Fugu rubripe cystathionine beta-synthase%2C 585 aa%3B fasta scores: opt: 1087 z-score: 1173.5 E(): 0%3B 39.6%25 identity in 465 aa overlap and to TR:CAB50991 (EMBL:AL096852) Streptomyces coelicolor cysteine synthase SCE19A.10c%2C 316 aa%3B fasta scores: opt: 558 z-score: 540.6 E(): 1.4e-24%3B 40.3%25 identity in 303 aa overlap. Contains Pfam matches to entries PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzyme%2C 2x PF00571 CBS%2C CBS domain and match to Prosite entry PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site;gbkey=CDS;gene=SCE25.18c;product=cystathionine beta-synthase;protein_id=NP_627297.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3370371	3370523	.	-	.	ID=id3844;Dbxref=GeneID:1098510;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 13.90%2C E-value 0.93;gbkey=misc_feature;gene=SCE25.18c
NC_003888.3	RefSeq	sequence_feature	3370557	3370742	.	-	.	ID=id3845;Dbxref=GeneID:1098510;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 31.40%2C E-value 2.1e-05;gbkey=misc_feature;gene=SCE25.18c
NC_003888.3	RefSeq	sequence_feature	3370854	3371726	.	-	.	ID=id3846;Dbxref=GeneID:1098510;Note=Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzyme%2C score 388.70%2C E-value 5.9e-113;gbkey=misc_feature;gene=SCE25.18c
NC_003888.3	RefSeq	sequence_feature	3371592	3371648	.	-	.	ID=id3847;Dbxref=GeneID:1098510;Note=PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site;gbkey=misc_feature;gene=SCE25.18c
NC_003888.3	RefSeq	ribosome_entry_site	3371750	3371754	.	-	.	ID=id3848;gbkey=RBS
NC_003888.3	RefSeq	gene	3371912	3372934	.	+	.	ID=gene3096;Dbxref=GeneID:1098511;Name=SCE25.19;gbkey=Gene;gene=SCE25.19;gene_biotype=protein_coding;gene_synonym=SCE25.19;locus_tag=SCO3078
NC_003888.3	RefSeq	CDS	3371912	3372934	.	+	0	ID=cds3038;Parent=gene3096;Dbxref=Genbank:NP_627298.1,GeneID:1098511;Name=NP_627298.1;Note=SCE25.19%2C possible hypothetical protein%2C len: 340 aa%3B similar to TR:O53423 (EMBL:AL021897) Mycobacterium tuberculosis hypothetical 32.9 kD protein MTV017.28c%2C 314 aa%3B fasta scotes: opt: 519 z-score: 544.7 E(): 7e-23%3B 38.3%25 identity in 332 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE25.19;product=hypothetical protein;protein_id=NP_627298.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3373151	3373154	.	+	.	ID=id3849;gbkey=RBS
NC_003888.3	RefSeq	gene	3373160	3374380	.	+	.	ID=gene3097;Dbxref=GeneID:1098512;Name=SCE25.20;gbkey=Gene;gene=SCE25.20;gene_biotype=protein_coding;gene_synonym=SCE25.20;locus_tag=SCO3079
NC_003888.3	RefSeq	CDS	3373160	3374380	.	+	0	ID=cds3039;Parent=gene3097;Dbxref=Genbank:NP_627299.1,GeneID:1098512;Name=NP_627299.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;gbkey=CDS;gene=SCE25.20;product=acetyl-CoA acetyltransferase;protein_id=NP_627299.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3373160	3374374	.	+	.	ID=id3850;Dbxref=GeneID:1098512;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2C score 530.20%2C E-value 1.5e-155;gbkey=misc_feature;gene=SCE25.20
NC_003888.3	RefSeq	sequence_feature	3374210	3374260	.	+	.	ID=id3851;Dbxref=GeneID:1098512;Note=PS00737 Thiolases signature 2;gbkey=misc_feature;gene=SCE25.20
NC_003888.3	RefSeq	ribosome_entry_site	3374664	3374667	.	+	.	ID=id3852;gbkey=RBS
NC_003888.3	RefSeq	gene	3374675	3375484	.	+	.	ID=gene3098;Dbxref=GeneID:1098513;Name=SCE25.21;gbkey=Gene;gene=SCE25.21;gene_biotype=protein_coding;gene_synonym=SCE25.21;locus_tag=SCO3080
NC_003888.3	RefSeq	CDS	3374675	3375484	.	+	0	ID=cds3040;Parent=gene3098;Dbxref=Genbank:NP_627300.1,GeneID:1098513;Name=NP_627300.1;Note=SCE25.21%2C possible hypothetical protein%2C len: 269 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE25.21;product=hypothetical protein;protein_id=NP_627300.1;transl_table=11
NC_003888.3	RefSeq	gene	3375535	3375828	.	-	.	ID=gene3099;Dbxref=GeneID:1098514;Name=SCE25.22c;gbkey=Gene;gene=SCE25.22c;gene_biotype=protein_coding;gene_synonym=SCE25.22c;locus_tag=SCO3081
NC_003888.3	RefSeq	CDS	3375535	3375828	.	-	0	ID=cds3041;Parent=gene3099;Dbxref=Genbank:NP_627301.1,GeneID:1098514;Name=NP_627301.1;Note=SCE25.22c%2C unknown%2C len: 97 aa;gbkey=CDS;gene=SCE25.22c;product=hypothetical protein;protein_id=NP_627301.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3375940	3375944	.	+	.	ID=id3853;gbkey=RBS
NC_003888.3	RefSeq	gene	3375950	3376180	.	+	.	ID=gene3100;Dbxref=GeneID:1098515;Name=SCE25.23;gbkey=Gene;gene=SCE25.23;gene_biotype=protein_coding;gene_synonym=SCE25.23;locus_tag=SCO3082
NC_003888.3	RefSeq	CDS	3375950	3376180	.	+	0	ID=cds3042;Parent=gene3100;Dbxref=Genbank:NP_627302.1,GeneID:1098515;Name=NP_627302.1;Note=SCE25.23%2C unknown%2C len: 76 aa;gbkey=CDS;gene=SCE25.23;product=hypothetical protein;protein_id=NP_627302.1;transl_table=11
NC_003888.3	RefSeq	gene	3376252	3377175	.	-	.	ID=gene3101;Dbxref=GeneID:1098516;Name=SCE25.24c;gbkey=Gene;gene=SCE25.24c;gene_biotype=protein_coding;gene_synonym=SCE25.24c;locus_tag=SCO3083
NC_003888.3	RefSeq	CDS	3376252	3377175	.	-	0	ID=cds3043;Parent=gene3101;Dbxref=Genbank:NP_627303.1,GeneID:1098516;Name=NP_627303.1;Note=SCE25.24c%2C possible integral membrane protein%2C len: 307 aa%3B highly similar to TR:Q54192 (EMBL:M80628) Streptomyces griseus transfer hypothetical product%2C 293 aa%3B fasta scores: opt: 1265 z-score: 1184.1 E(): 0%3B 70.7%25 identity in 307 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE25.24c;product=hypothetical protein;protein_id=NP_627303.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3377180	3377186	.	-	.	ID=id3854;gbkey=RBS
NC_003888.3	RefSeq	gene	3377344	3378513	.	-	.	ID=gene3102;Dbxref=GeneID:1098517;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;gene_synonym=pobA,SCE25.25c;locus_tag=SCO3084
NC_003888.3	RefSeq	CDS	3377344	3378513	.	-	0	ID=cds3044;Parent=gene3102;Dbxref=Genbank:NP_627304.1,GeneID:1098517;Name=NP_627304.1;Note=catalyzes the formation of protocatechuate from 4-hydroxybenzoate;gbkey=CDS;gene=pobA;product=4-hydroxybenzoate 3-monooxygenase;protein_id=NP_627304.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3377497	3378063	.	-	.	ID=id3855;Dbxref=GeneID:1098517;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 119.90%2C E-value 4.7e-32;gbkey=misc_feature;gene=pobA
NC_003888.3	RefSeq	sequence_feature	3378091	3378501	.	-	.	ID=id3856;Dbxref=GeneID:1098517;Note=Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain%2C score 100.00%2C E-value 4.5e-26;gbkey=misc_feature;gene=pobA
NC_003888.3	RefSeq	gene	3378735	3379088	.	-	.	ID=gene3103;Dbxref=GeneID:1098518;Name=SCE25.26c;gbkey=Gene;gene=SCE25.26c;gene_biotype=protein_coding;gene_synonym=SCE25.26c;locus_tag=SCO3085
NC_003888.3	RefSeq	CDS	3378735	3379088	.	-	0	ID=cds3045;Parent=gene3103;Dbxref=Genbank:NP_627305.1,GeneID:1098518;Name=NP_627305.1;Note=SCE25.26c%2C possible membarne protein%2C len: 117 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE25.26c;product=hypothetical protein;protein_id=NP_627305.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3379412	3379416	.	+	.	ID=id3857;gbkey=RBS
NC_003888.3	RefSeq	gene	3379423	3380202	.	+	.	ID=gene3104;Dbxref=GeneID:1098519;Name=SCE25.27;gbkey=Gene;gene=SCE25.27;gene_biotype=protein_coding;gene_synonym=SCE25.27;locus_tag=SCO3086
NC_003888.3	RefSeq	CDS	3379423	3380202	.	+	0	ID=cds3046;Parent=gene3104;Dbxref=Genbank:NP_627306.1,GeneID:1098519;Name=NP_627306.1;Note=SCE25.27%2C possible lipoprotein%2C len: 259 aa. Contains matches to Prosite entries PS00013 Prokaryotic membrane lipoprotein lipid attachment site (correctly situated) and PS00017 ATP/GTP-binding site motif A (P-loop)%2C possible N-terminal region signal peptide sequence and high content in alanine and glycine amino acid residues;gbkey=CDS;gene=SCE25.27;product=lipoprotein;protein_id=NP_627306.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3379468	3379500	.	+	.	ID=id3858;Dbxref=GeneID:1098519;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE25.27
NC_003888.3	RefSeq	sequence_feature	3379591	3379614	.	+	.	ID=id3859;Dbxref=GeneID:1098519;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE25.27
NC_003888.3	RefSeq	repeat_region	3379799	3379840	.	+	.	ID=id3860;Dbxref=GeneID:1098519;Note=degenerate 2x repeat: P(P/S)R(R/P)APRK(S/T)SRPRP;gbkey=repeat_region;gene=SCE25.27
NC_003888.3	RefSeq	repeat_region	3380087	3380128	.	+	.	ID=id3861;Dbxref=GeneID:1098519;Note=degenerate 2x repeat: P(P/S)R(R/P)APRK(S/T)SRPRP;gbkey=repeat_region;gene=SCE25.27
NC_003888.3	RefSeq	gene	3380229	3380874	.	-	.	ID=gene3105;Dbxref=GeneID:1098520;Name=SCE25.28c;gbkey=Gene;gene=SCE25.28c;gene_biotype=pseudogene;gene_synonym=SCE25.28c;locus_tag=SCO3087;pseudo=true
NC_003888.3	RefSeq	sequence_feature	3380229	3380874	.	-	.	ID=id3862;Dbxref=GeneID:1098520;Note=SCE25.29c%2C possible pseudogene%2C 646 bp%3B similar to SW:YHIM_ECOLI (EMBL:U00039) Escherichia coli hypothetical 39.2 kD protein in RhsB-Pit intergenic region YhiM%2C 364 aa%3B fasta scores: opt: 284 z-score: 377.0 E(): 1.5e-1%3B 61.6%25 identity in 73 aa overlap;gbkey=misc_feature;gene=SCE25.28c
NC_003888.3	RefSeq	sequence_feature	3380650	3381522	.	-	.	ID=id3863;Note=previously sequenced fragment EMBL:Y00209 Streptomyces coelicolor bldA gene for tRNA-like product;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3380890	3380976	.	-	.	ID=gene3106;Dbxref=GeneID:1098521;Name=bldA;gbkey=Gene;gene=bldA;gene_biotype=tRNA;locus_tag=SCOt24
NC_003888.3	RefSeq	tRNA	3380890	3380976	.	-	.	ID=rna34;Parent=gene3106;Dbxref=GeneID:1098521;Note=tRNA Leu anticodon TAA (bldA)%2C Cove score 58.78;gbkey=tRNA;gene=bldA;product=tRNA-Leu
NC_003888.3	RefSeq	exon	3380890	3380976	.	-	.	ID=id3864;Parent=rna34;Dbxref=GeneID:1098521;Note=tRNA Leu anticodon TAA (bldA)%2C Cove score 58.78;gbkey=tRNA;gene=bldA;product=tRNA-Leu
NC_003888.3	RefSeq	gene	3381094	3381339	.	-	.	ID=gene3107;Dbxref=GeneID:1098522;Name=SCE25.29c;gbkey=Gene;gene=SCE25.29c;gene_biotype=protein_coding;gene_synonym=SCE25.29c;locus_tag=SCO3088
NC_003888.3	RefSeq	CDS	3381094	3381339	.	-	0	ID=cds3047;Parent=gene3107;Dbxref=Genbank:NP_627307.1,GeneID:1098522;Name=NP_627307.1;Note=SCE25.29c%2C doubtful CDS%2C function unknown%2C len: 81 aa. Hig content in alanine and glycine amino acid residues;gbkey=CDS;gene=SCE25.29c;product=hypothetical protein;protein_id=NP_627307.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3381336	3381349	.	+	.	ID=id3865;Note=degenerate 6x repeat GCAC(G/A)C(G/A)CCGT(G/A)CC;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3381354	3381367	.	+	.	ID=id3866;Note=degenerate 6x repeat GCAC(G/A)C(G/A)CCGT(G/A)CC;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3381370	3381383	.	+	.	ID=id3867;Note=degenerate 6x repeat GCAC(G/A)C(G/A)CCGT(G/A)CC;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3381386	3381399	.	+	.	ID=id3868;Note=degenerate 6x repeat GCAC(G/A)C(G/A)CCGT(G/A)CC;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3381403	3381416	.	+	.	ID=id3869;Note=degenerate 6x repeat GCAC(G/A)C(G/A)CCGT(G/A)CC;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3381421	3381434	.	+	.	ID=id3870;Note=degenerate 6x repeat GCAC(G/A)C(G/A)CCGT(G/A)CC;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	3381438	3381442	.	+	.	ID=id3871;gbkey=RBS
NC_003888.3	RefSeq	gene	3381453	3382223	.	+	.	ID=gene3108;Dbxref=GeneID:1098523;Name=SCE25.30;gbkey=Gene;gene=SCE25.30;gene_biotype=protein_coding;gene_synonym=SCE25.30;locus_tag=SCO3089
NC_003888.3	RefSeq	CDS	3381453	3382223	.	+	0	ID=cds3048;Parent=gene3108;Dbxref=Genbank:NP_627308.1,GeneID:1098523;Name=NP_627308.1;Note=SCE25.30 probable ABC transporter ATP-binding protein%2C len: 256 aa%3B similar to TR:CAB81857 (EMBL:AL16169) Streptomyces coelicolor ABC transporter ATP-binding protein SCD40A.12c%2C 246 aa%3B fasta scores: opt: 922 z-score: 1039.0 E(): 0%3B 58.4%25 identity in 238 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCE25.30;product=ABC transporter ATP-binding protein;protein_id=NP_627308.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3381582	3382136	.	+	.	ID=id3872;Dbxref=GeneID:1098523;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 191.40%2C E-value 1.4e-53;gbkey=misc_feature;gene=SCE25.30
NC_003888.3	RefSeq	sequence_feature	3381603	3381626	.	+	.	ID=id3873;Dbxref=GeneID:1098523;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE25.30
NC_003888.3	RefSeq	sequence_feature	3381909	3381953	.	+	.	ID=id3874;Dbxref=GeneID:1098523;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE25.30
NC_003888.3	RefSeq	gene	3382330	3384861	.	+	.	ID=gene3109;Dbxref=GeneID:1098524;Name=SCE25.31;gbkey=Gene;gene=SCE25.31;gene_biotype=protein_coding;gene_synonym=SCE25.31;locus_tag=SCO3090
NC_003888.3	RefSeq	CDS	3382330	3384861	.	+	0	ID=cds3049;Parent=gene3109;Dbxref=Genbank:NP_627309.1,GeneID:1098524;Name=NP_627309.1;Note=SCE25.31%2C possible ABC transporter integral membrane protein%2C len: 843 aa%3B similar to TR:CAB77000 (EMBL:AL159178) Streptomyces coelicolor integral membrane protein SCH22A.31%2C 850 aa%3B fasta scores: opt: 675 z-score: 676.0 E(): 3.4e-30%3B 26.4%25 identity in 879 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE25.31;product=ABC transporter;protein_id=NP_627309.1;transl_table=11
NC_003888.3	RefSeq	gene	3384933	3386249	.	-	.	ID=gene3110;Dbxref=GeneID:1098525;Name=SCE25.32c;gbkey=Gene;gene=SCE25.32c;gene_biotype=protein_coding;gene_synonym=SCE25.32c;locus_tag=SCO3091
NC_003888.3	RefSeq	CDS	3384933	3386249	.	-	0	ID=cds3050;Parent=gene3110;Dbxref=Genbank:NP_627310.1,GeneID:1098525;Name=NP_627310.1;Note=SCE25.32c%2C cyclopropane-fatty-acyl-phospholipid synthase%2C len: 438 aa%3B similar to TR:AAF1173 (EMBL:AE002051) Deinococcus radiodurans cyclopropane-fatty-acyl-phospholipid synthase%2C DR2187%2C 462 aa%3B fasta scores: opt: 832 z-score: 910.3 E(): 0%3B 42.7%25 identity in 433 aa overlap and to SW:CFA_ECOLI (EMBL:M98330) Escherichia coli cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) (cyclopropane fatty acid synthase) (CFA synthase) Cfa or CdfA%2C 381 aa%3B fasta scores: opt: 482 z-score: 530.2 E(): 4.5e-22%3B 38.0%25 identity in 303 aa overlap;gbkey=CDS;gene=SCE25.32c;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=NP_627310.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3386256	3386260	.	-	.	ID=id3875;gbkey=RBS
NC_003888.3	RefSeq	gene	3386513	3387853	.	-	.	ID=gene3111;Dbxref=GeneID:1098526;Name=SCE25.33c;gbkey=Gene;gene=SCE25.33c;gene_biotype=protein_coding;gene_synonym=SCE25.33c,SCE41.01c;locus_tag=SCO3092
NC_003888.3	RefSeq	CDS	3386513	3387853	.	-	0	ID=cds3051;Parent=gene3111;Dbxref=Genbank:NP_733592.1,GeneID:1098526;Name=NP_733592.1;Note=SCE41.01c%2C probable oxidoreductase (fragment)%2C len: >317 aa%3B similar to SW:DHNA_ECOLI (EMBL:V00306) Escherichia coli NADH dehydrogenase (EC 1.6.99.3) Ndh%2C 433 aa%3B fasta scores: opt: 361 z-score: 417.8 E(): 9.1e-16%3B 27.6%25 identity in 330 aa overlap and to TR:CAB92372 (EMBL:AL356612) Streptomyces coelicolor NADH dehydrogenase SCD72A.05%2C 442 aa%3B fasta scores: opt: 1185 z-score: 1267.3 E(): 0%3B 57.0%25 identity in 321 aa overlap. Contains Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase~SCE25.33c%2C possible dehydrogenase (fragment)%2C len: >162 aa%3B similar to TR:Q9ZC17 (EMBL:AL033505) Streptomyces coelicolor dehydrogenase SC1E6.05%2C 629 aa%3B fasta scores: opt: 209 z-score: 253.8 E(): 1.1e-06%3B 32.6%25 identity in 141 aa overlap and to C-terminal region of SW:DHNA_ECOLI (EMBL:V00306) Escherichia coli NADH dehydrogenase (EC 1.6.99.3) Ndh%2C 433 aa%3B fasta scores: opt: 116 z-score: 145.6 E(): 1.2%3B 26.8%25 identity in 82 aa overlap;gbkey=CDS;gene=SCE25.33c;product=oxidoreductase;protein_id=NP_733592.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3387014	3387700	.	-	.	ID=id3876;Dbxref=GeneID:1098526;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 76.80%2C E-value 6.7e-22;gbkey=misc_feature;gene=SCE25.33c
NC_003888.3	RefSeq	gene	3388379	3389320	.	-	.	ID=gene3112;Dbxref=GeneID:1098527;Name=SCE41.02c;gbkey=Gene;gene=SCE41.02c;gene_biotype=protein_coding;gene_synonym=SCE41.02c;locus_tag=SCO3093
NC_003888.3	RefSeq	CDS	3388379	3389320	.	-	0	ID=cds3052;Parent=gene3112;Dbxref=Genbank:NP_627311.1,GeneID:1098527;Name=NP_627311.1;Note=SCE41.02c%2C possible hydrolase%2C len: 313 aa%3B similar to N-terminal region of SW:GPPA_ECOLI (EMBL:M87049) Escherichia coli guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase (EC 3.6.1.40) GppA%2C 494 aa%3B fasta scores: opt: 311 z-score: 357.2 E(): 2.2e-12%3B 28.4%25 identity in 310 aa overlap;gbkey=CDS;gene=SCE41.02c;product=hydrolase;protein_id=NP_627311.1;transl_table=11
NC_003888.3	RefSeq	gene	3389317	3389877	.	-	.	ID=gene3113;Dbxref=GeneID:1098528;Name=SCE41.03c;gbkey=Gene;gene=SCE41.03c;gene_biotype=protein_coding;gene_synonym=SCE41.03c;locus_tag=SCO3094
NC_003888.3	RefSeq	CDS	3389317	3389877	.	-	0	ID=cds3053;Parent=gene3113;Dbxref=Genbank:NP_627312.1,GeneID:1098528;Name=NP_627312.1;Note=SCE41.03c%2C conserved hypothetical protein%2C len: 186 aa%3B similar to TR:P96375 (EMBL:Z92539) Mycobacterium tuberculosis hypothetical 16.6 kDa protein MTCY10G2.24c%2C 155 aa%3B fasta scores: opt: 632 z-score: 730.7 E(): 0%3B 67.6%25 identity in 136 aa overlap;gbkey=CDS;gene=SCE41.03c;product=hypothetical protein;protein_id=NP_627312.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3389327	3389336	.	-	.	ID=id3877;Dbxref=GeneID:1098528;gbkey=RBS;gene=SCE41.03c
NC_003888.3	RefSeq	gene	3389963	3390487	.	-	.	ID=gene3114;Dbxref=GeneID:1098529;Name=SCE41.04c;gbkey=Gene;gene=SCE41.04c;gene_biotype=protein_coding;gene_synonym=SCE41.04c;locus_tag=SCO3095
NC_003888.3	RefSeq	CDS	3389963	3390487	.	-	0	ID=cds3054;Parent=gene3114;Dbxref=Genbank:NP_627313.1,GeneID:1098529;Name=NP_627313.1;Note=SCE41.04c%2C membrane protein%2C len: 174 aa%3B similar to TR:P96376 (EMBL:Z92539) Mycobacterium tuberculosis hypothetical 24.6 kDa protein MTC10G2.25c%2C 228 aa%3B fasta scores: opt: 273 z-score: 332.6 E(): 5.1e-11%3B 35.6%25 identity in 149 aa overlap. Contains possible coiled-coil region at approx residues 87..106 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE41.04c;product=hypothetical protein;protein_id=NP_627313.1;transl_table=11
NC_003888.3	RefSeq	gene	3390541	3391821	.	-	.	ID=gene3115;Dbxref=GeneID:1098530;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;gene_synonym=SCE41.05c;locus_tag=SCO3096
NC_003888.3	RefSeq	CDS	3390541	3391821	.	-	0	ID=cds3055;Parent=gene3115;Dbxref=Genbank:NP_627314.1,GeneID:1098530;Name=NP_627314.1;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=phosphopyruvate hydratase;protein_id=NP_627314.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3390550	3391818	.	-	.	ID=id3878;Dbxref=GeneID:1098530;Note=Pfam match to entry PF00113 enolase%2C Enol-ase%2C score 835.40%2C E-value 1.9e-247;gbkey=misc_feature;gene=eno
NC_003888.3	RefSeq	sequence_feature	3390787	3390828	.	-	.	ID=id3879;Dbxref=GeneID:1098530;Note=PS00164 Enolase signature;gbkey=misc_feature;gene=eno
NC_003888.3	RefSeq	ribosome_entry_site	3391828	3391833	.	-	.	ID=id3880;gbkey=RBS
NC_003888.3	RefSeq	gene	3392083	3392817	.	-	.	ID=gene3116;Dbxref=GeneID:1098531;Name=SCE41.06c;gbkey=Gene;gene=SCE41.06c;gene_biotype=protein_coding;gene_synonym=SCE41.06c;locus_tag=SCO3097
NC_003888.3	RefSeq	CDS	3392083	3392817	.	-	0	ID=cds3056;Parent=gene3116;Dbxref=Genbank:NP_627315.1,GeneID:1098531;Name=NP_627315.1;Note=SCE41.06c%2C possible hypothetical protein%2C len: 244 aa%3B similar to TR:O86308 (EMBL:Z96935) Micrococcus luteus Rpf protein precursor%2C 220 aa%3B fasta scores: opt: 366 z-score: 357.9 E(): 2e-12%3B 39.7%25 identity in 234 aa overlap. Contains Pfam match to entry PF01476 PG_binding_2%2C  peptidoglycan binding domain and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE41.06c;product=hypothetical protein;protein_id=NP_627315.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3392086	3392229	.	-	.	ID=id3881;Dbxref=GeneID:1098531;Note=Pfam match to entry PF01476 PG_binding_2%2C  peptidoglycan binding domain%2C score 42.60%2C E-value 8.6e-09;gbkey=misc_feature;gene=SCE41.06c
NC_003888.3	RefSeq	sequence_feature	3392371	3392436	.	-	.	ID=id3882;Dbxref=GeneID:1098531;Note=high glycine and serine amino acid residues content region;gbkey=misc_feature;gene=SCE41.06c
NC_003888.3	RefSeq	ribosome_entry_site	3392827	3392830	.	-	.	ID=id3883;gbkey=RBS
NC_003888.3	RefSeq	gene	3393171	3394196	.	-	.	ID=gene3117;Dbxref=GeneID:1098532;Name=SCE41.07c;gbkey=Gene;gene=SCE41.07c;gene_biotype=protein_coding;gene_synonym=SCE41.07c;locus_tag=SCO3098
NC_003888.3	RefSeq	CDS	3393171	3394196	.	-	0	ID=cds3057;Parent=gene3117;Dbxref=Genbank:NP_627316.1,GeneID:1098532;Name=NP_627316.1;Note=SCE41.07c%2C possible hypothetical protein%2C len: 341 aa%3B similar to TR:O53879 (EMBL:AL022004) Mycobacterium tuberculosis hypothetical 40.0 kDa protein MTV043.60c%2C 407 aa%3B fasta scores: opt: 443 z-score: 346.0 E(): 9.1e-12%3B 33.3%25 identity in 234 aa overlap. Contains Pfam match to entry PF01476 PG_binding_2%2C  peptidoglycan binding domain and high content in serine and glycine amino acid residues. Also contains a possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE41.07c;product=hypothetical protein;protein_id=NP_627316.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3393192	3393338	.	-	.	ID=id3884;Dbxref=GeneID:1098532;Note=Pfam match to entry PF01476 PG_binding_2%2C  peptidoglycan binding domain%2C score 27.60%2C E-value 0.00028;gbkey=misc_feature;gene=SCE41.07c
NC_003888.3	RefSeq	sequence_feature	3393435	3393848	.	-	.	ID=id3885;Dbxref=GeneID:1098532;Note=high glycine and serine amino acid residues content region;gbkey=misc_feature;gene=SCE41.07c
NC_003888.3	RefSeq	gene	3394340	3395641	.	-	.	ID=gene3118;Dbxref=GeneID:1098533;Name=SCE41.08c;gbkey=Gene;gene=SCE41.08c;gene_biotype=protein_coding;gene_synonym=SCE41.08c;locus_tag=SCO3099
NC_003888.3	RefSeq	CDS	3394340	3395641	.	-	0	ID=cds3058;Parent=gene3118;Dbxref=Genbank:NP_627317.1,GeneID:1098533;Name=NP_627317.1;Note=SCE41.08c%2C probable cytochrome P450 hydroxylase%2C len: 433 aa%3B similar to SW:CPXR_BRAJA (EMBL:U12678) Bradyrhizobium japonicum cytochrome P450 BJ-3 (EC 1.14.14.-) CYP114%2C 429 aa%3B fasta scores: opt: 682 z-score: 792.5 E(): 0%3B 32.9%25 identity in 435 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450;gbkey=CDS;gene=SCE41.08c;product=cytochrome P450 hydroxylase;protein_id=NP_627317.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3394379	3395557	.	-	.	ID=id3886;Dbxref=GeneID:1098533;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450;gbkey=misc_feature;gene=SCE41.08c
NC_003888.3	RefSeq	gene	3395638	3396615	.	-	.	ID=gene3119;Dbxref=GeneID:1098534;Name=SCE41.09c;gbkey=Gene;gene=SCE41.09c;gene_biotype=protein_coding;gene_synonym=SCE41.09c;locus_tag=SCO3100
NC_003888.3	RefSeq	CDS	3395638	3396615	.	-	0	ID=cds3059;Parent=gene3119;Dbxref=Genbank:NP_627318.1,GeneID:1098534;Name=NP_627318.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase Era;gbkey=CDS;gene=SCE41.09c;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=NP_627318.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3395643	3395646	.	-	.	ID=id3887;Dbxref=GeneID:1098534;gbkey=RBS;gene=SCE41.09c
NC_003888.3	RefSeq	ribosome_entry_site	3396617	3396620	.	-	.	ID=id3888;gbkey=RBS
NC_003888.3	RefSeq	gene	3396692	3397339	.	-	.	ID=gene3120;Dbxref=GeneID:1098535;Name=SCE41.10c;gbkey=Gene;gene=SCE41.10c;gene_biotype=protein_coding;gene_synonym=SCE41.10c;locus_tag=SCO3101
NC_003888.3	RefSeq	CDS	3396692	3397339	.	-	0	ID=cds3060;Parent=gene3120;Dbxref=Genbank:NP_627319.1,GeneID:1098535;Name=NP_627319.1;Note=SCE41.10c%2C possible lipoprotein%2C len: 215 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE41.10c;product=lipoprotein;protein_id=NP_627319.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3397265	3397297	.	-	.	ID=id3889;Dbxref=GeneID:1098535;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE41.10c
NC_003888.3	RefSeq	sequence_feature	3397286	3399205	.	-	.	ID=id3890;Note=previously sequenced DNA fragment. EMBL:AB018799 Streptomyces coelicolor gene for eukaryotic-type protein kinase%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	3397344	3397349	.	-	.	ID=id3891;gbkey=RBS
NC_003888.3	RefSeq	gene	3397490	3398953	.	-	.	ID=gene3121;Dbxref=GeneID:1098536;Name=pkaE;gbkey=Gene;gene=pkaE;gene_biotype=protein_coding;gene_synonym=pkaE,SCE41.11c;locus_tag=SCO3102
NC_003888.3	RefSeq	CDS	3397490	3398953	.	-	0	ID=cds3061;Parent=gene3121;Dbxref=Genbank:NP_627320.1,GeneID:1098536;Name=NP_627320.1;Note=SCE41.11c%2C pkaE%2C eukaryotic-type protein kinase%2C len: 487 aa%3B identical to previously sequenced TR:Q9ZNB6 (EMBL:AB018799) Streptomyces coelicolor eukaryotic-type protein kinase PkaE%2C 287 aa. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature;gbkey=CDS;gene=pkaE;product=protein kinase;protein_id=NP_627320.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3398195	3398953	.	-	.	ID=id3892;Dbxref=GeneID:1098536;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 202.00%2C E-value 9e-57;gbkey=misc_feature;gene=pkaE
NC_003888.3	RefSeq	sequence_feature	3398582	3398620	.	-	.	ID=id3893;Dbxref=GeneID:1098536;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaE
NC_003888.3	RefSeq	sequence_feature	3398897	3398953	.	-	.	ID=id3894;Dbxref=GeneID:1098536;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=pkaE
NC_003888.3	RefSeq	gene	3399019	3399624	.	-	.	ID=gene3122;Dbxref=GeneID:1098537;Name=SCE41.12c;gbkey=Gene;gene=SCE41.12c;gene_biotype=protein_coding;gene_synonym=SCE41.12c;locus_tag=SCO3103
NC_003888.3	RefSeq	CDS	3399019	3399624	.	-	0	ID=cds3062;Parent=gene3122;Dbxref=Genbank:NP_627321.1,GeneID:1098537;Name=NP_627321.1;Note=SCE41.12c%2C possible integral membrane protein%2C len: 201 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE41.12c;product=hypothetical protein;protein_id=NP_627321.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3399630	3399636	.	-	.	ID=id3895;gbkey=RBS
NC_003888.3	RefSeq	gene	3399763	3401802	.	-	.	ID=gene3123;Dbxref=GeneID:1098538;Name=SCE41.13c;gbkey=Gene;gene=SCE41.13c;gene_biotype=protein_coding;gene_synonym=SCE41.13c;locus_tag=SCO3104
NC_003888.3	RefSeq	CDS	3399763	3401802	.	-	0	ID=cds3063;Parent=gene3123;Dbxref=Genbank:NP_627322.1,GeneID:1098538;Name=NP_627322.1;Note=SCE41.13c%2C unknown%2C len: 679 aa;gbkey=CDS;gene=SCE41.13c;product=hypothetical protein;protein_id=NP_627322.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3401814	3401817	.	-	.	ID=id3896;gbkey=RBS
NC_003888.3	RefSeq	gene	3401899	3402504	.	+	.	ID=gene3124;Dbxref=GeneID:1098539;Name=SCE41.14;gbkey=Gene;gene=SCE41.14;gene_biotype=protein_coding;gene_synonym=SCE41.14;locus_tag=SCO3105
NC_003888.3	RefSeq	CDS	3401899	3402504	.	+	0	ID=cds3064;Parent=gene3124;Dbxref=Genbank:NP_627323.1,GeneID:1098539;Name=NP_627323.1;Note=SCE41.14%2C unknown%2C len: 201 aa;gbkey=CDS;gene=SCE41.14;product=hypothetical protein;protein_id=NP_627323.1;transl_table=11
NC_003888.3	RefSeq	gene	3402554	3403453	.	+	.	ID=gene3125;Dbxref=GeneID:1098540;Name=SCE41.15;gbkey=Gene;gene=SCE41.15;gene_biotype=protein_coding;gene_synonym=SCE41.15;locus_tag=SCO3106
NC_003888.3	RefSeq	CDS	3402554	3403453	.	+	0	ID=cds3065;Parent=gene3125;Dbxref=Genbank:NP_627324.1,GeneID:1098540;Name=NP_627324.1;Note=SCE41.15%2C possible lipoprotein%2C len: 299 aa%3B similar to TR:CAB76294 (EMBL:AL158057) Streptomyces coelicolor lipoprotein SC10G8.21c%2C 249 aa%3B fasta scores: opt: 407 z-score: 384.9 E(): 6.2e-14%3B 31.1%25 identity in 241 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE41.15;product=lipoprotein;protein_id=NP_627324.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3402587	3402619	.	+	.	ID=id3897;Dbxref=GeneID:1098540;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE41.15
NC_003888.3	RefSeq	sequence_feature	3402668	3402790	.	+	.	ID=id3898;Dbxref=GeneID:1098540;Note=high alanine%2C serine and proline amino acid residues content region;gbkey=misc_feature;gene=SCE41.15
NC_003888.3	RefSeq	gene	3403521	3404297	.	-	.	ID=gene3126;Dbxref=GeneID:1098541;Name=SCE41.16c;gbkey=Gene;gene=SCE41.16c;gene_biotype=protein_coding;gene_synonym=SCE41.16c;locus_tag=SCO3107
NC_003888.3	RefSeq	CDS	3403521	3404297	.	-	0	ID=cds3066;Parent=gene3126;Dbxref=Genbank:NP_627325.1,GeneID:1098541;Name=NP_627325.1;Note=SCE41.16c%2C possible lipoprotein%2C len: 258 aa%3B similar to TR:P95123 (EMBL:Z83018) Mycobacterium tuberculosis hypothetical 25.9 kDa protein MTCY349.15%2C 237 aa%3B fasta scores: opt: 498 z-score: 531.0 E(): 4.5e-22%3B 44.1%25 identity in 186 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE41.16c;product=lipoprotein;protein_id=NP_627325.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3404220	3404252	.	-	.	ID=id3899;Dbxref=GeneID:1098541;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE41.16c
NC_003888.3	RefSeq	ribosome_entry_site	3404305	3404309	.	-	.	ID=id3900;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3404432	3404437	.	+	.	ID=id3901;gbkey=RBS
NC_003888.3	RefSeq	gene	3404444	3404641	.	+	.	ID=gene3127;Dbxref=GeneID:1098542;Name=SCE41.17;gbkey=Gene;gene=SCE41.17;gene_biotype=protein_coding;gene_synonym=SCE41.17;locus_tag=SCO3108
NC_003888.3	RefSeq	CDS	3404444	3404641	.	+	0	ID=cds3067;Parent=gene3127;Dbxref=Genbank:NP_627326.1,GeneID:1098542;Name=NP_627326.1;Note=SCE41.17%2C conserved hypothetical protein%2C len: 65 aa%3B similar to TR:O05901 (EMBL:Z95210) Mycobacterium tuberculosis hypothetical 6.4 kDa protein MTCY21C12.03%2C 59 aa%3B fasta scores: opt: 102 z-score: 149.9 E(): 0.76%3B 29.3%25 identity in 58 aa overlap;gbkey=CDS;gene=SCE41.17;product=hypothetical protein;protein_id=NP_627326.1;transl_table=11
NC_003888.3	RefSeq	gene	3404759	3408313	.	-	.	ID=gene3128;Dbxref=GeneID:1098543;Name=SCE41.18c;gbkey=Gene;gene=SCE41.18c;gene_biotype=protein_coding;gene_synonym=SCE41.18c;locus_tag=SCO3109
NC_003888.3	RefSeq	CDS	3404759	3408313	.	-	0	ID=cds3068;Parent=gene3128;Dbxref=Genbank:NP_627327.1,GeneID:1098543;Name=NP_627327.1;Note=SCE41.18c%2C probable transcriptional-repair coupling factor%2C len: 1184 aa%3B similar to SW:MFD_ECOLI (EMBL:AE000211) Escherichia coli transcriptional-repair coupling factor Mfd%2C 1148 aa%3B fasta scores: opt: 2043 z-score: 2247.7 E(): 0%3B 37.5%25 identity in 1181 aa overlap . Contains Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase and PF00271 helicase_C%2C Helicases conserved C-terminal domain and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCE41.18c;product=transcriptional-repair coupling factor;protein_id=NP_627327.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3405491	3405745	.	-	.	ID=id3902;Dbxref=GeneID:1098543;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 50.40%2C E-value 4e-11;gbkey=misc_feature;gene=SCE41.18c
NC_003888.3	RefSeq	sequence_feature	3405851	3406441	.	-	.	ID=id3903;Dbxref=GeneID:1098543;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 96.50%2C E-value 1.3e-29;gbkey=misc_feature;gene=SCE41.18c
NC_003888.3	RefSeq	sequence_feature	3406307	3406330	.	-	.	ID=id3904;Dbxref=GeneID:1098543;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE41.18c
NC_003888.3	RefSeq	repeat_region	3408554	3408612	.	+	.	ID=id3905;Note=8x degenerate repeat unit: (A/G)CTC(G/A)(G/A)G;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3408654	3408804	.	+	.	ID=id3906;Note=10x degenerate repeat unit: (G/A)CT(T/C)(G/A)C(A/G)GGC(G/A)G(G/A/C)G;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3408950	3411514	.	-	.	ID=gene3129;Dbxref=GeneID:1098544;Name=SCE41.19c;gbkey=Gene;gene=SCE41.19c;gene_biotype=protein_coding;gene_synonym=SCE41.19c;locus_tag=SCO3110
NC_003888.3	RefSeq	CDS	3408950	3411514	.	-	0	ID=cds3069;Parent=gene3129;Dbxref=Genbank:NP_627328.1,GeneID:1098544;Name=NP_627328.1;Note=SCE41.19c%2C possible ABC transport system integral membrane protein%2C len: 854 aa%3B similar to TR:CAB96016 (EMBL:AL360055) Streptomyces coelicolor ABC transport system integral membrane protein SCG20A.11c%2C 855 aa%3B fasta scores: opt: 1429 z-score: 1454.6 E(): 0%3B 34.0%25 identity in 871 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE41.19c;product=ABC transporter;protein_id=NP_627328.1;transl_table=11
NC_003888.3	RefSeq	gene	3411511	3412299	.	-	.	ID=gene3130;Dbxref=GeneID:1098545;Name=SCE41.20c;gbkey=Gene;gene=SCE41.20c;gene_biotype=protein_coding;gene_synonym=SCE41.20c;locus_tag=SCO3111
NC_003888.3	RefSeq	CDS	3411511	3412299	.	-	0	ID=cds3070;Parent=gene3130;Dbxref=Genbank:NP_627329.1,GeneID:1098545;Name=NP_627329.1;Note=SCE41.20c%2C possible ABC transport system ATP-binding protein%2C len: 262 aa%3B similar to TR: CAB89461(EMBL:AL354048) Streptomyces coelicolor ABC transporter ATP-binding protein SCE25.31%2C 256 aa%3B fasta scores: opt: 1240 z-score: 1356.4 E(): 0%3B 75.2%25 identity in 246 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCE41.20c;product=ABC transporter ATP-binding protein;protein_id=NP_627329.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3411598	3412152	.	-	.	ID=id3907;Dbxref=GeneID:1098545;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 198.30%2C E-value 1.2e-55;gbkey=misc_feature;gene=SCE41.20c
NC_003888.3	RefSeq	sequence_feature	3411781	3411825	.	-	.	ID=id3908;Dbxref=GeneID:1098545;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE41.20c
NC_003888.3	RefSeq	sequence_feature	3412108	3412131	.	-	.	ID=id3909;Dbxref=GeneID:1098545;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE41.20c
NC_003888.3	RefSeq	ribosome_entry_site	3412307	3412311	.	-	.	ID=id3910;gbkey=RBS
NC_003888.3	RefSeq	gene	3413025	3413129	.	-	.	ID=gene3131;Dbxref=GeneID:1098546;Name=SCE41.21c;gbkey=Gene;gene=SCE41.21c;gene_biotype=protein_coding;gene_synonym=SCE41.21c;locus_tag=SCO3112
NC_003888.3	RefSeq	CDS	3413025	3413129	.	-	0	ID=cds3071;Parent=gene3131;Dbxref=Genbank:NP_627330.1,GeneID:1098546;Name=NP_627330.1;Note=SCE41.21c%2C partial CDS%2C len: 105 bp. Transposase remnant. Similar to TR:Q9X8Z6  TRANSPOSASE. Continuous with SCE41.22 when reversed;end_range=3413129,.;gbkey=CDS;gene=SCE41.21c;partial=true;product=hypothetical protein;protein_id=NP_627330.1;start_range=.,3413025;transl_table=11
NC_003888.3	RefSeq	gene	3413130	3413195	.	+	.	ID=gene3132;Dbxref=GeneID:1098547;Name=SCE41.22;gbkey=Gene;gene=SCE41.22;gene_biotype=protein_coding;gene_synonym=SCE41.22;locus_tag=SCO3113
NC_003888.3	RefSeq	CDS	3413130	3413195	.	+	0	ID=cds3072;Parent=gene3132;Dbxref=Genbank:NP_627331.1,GeneID:1098547;Name=NP_627331.1;Note=SCE41.22%2C partial CDS%2C len: 66 bp. Transposase remnant. Similar to TR:Q9X8Z6  TRANSPOSASE. Continuous with SCE41.21c when reversed;end_range=3413195,.;gbkey=CDS;gene=SCE41.22;partial=true;product=hypothetical protein;protein_id=NP_627331.1;start_range=.,3413130;transl_table=11
NC_003888.3	RefSeq	gene	3413804	3414700	.	-	.	ID=gene3133;Dbxref=GeneID:1098548;Name=SCE41.23c;gbkey=Gene;gene=SCE41.23c;gene_biotype=protein_coding;gene_synonym=SCE41.23c;locus_tag=SCO3114
NC_003888.3	RefSeq	CDS	3413804	3414700	.	-	0	ID=cds3073;Parent=gene3133;Dbxref=Genbank:NP_627332.1,GeneID:1098548;Name=NP_627332.1;Note=SCE41.23c%2C conserved hypothetical protein%2C len: 298 aa%3B similar to TR:O07481 (EMBL:Z97071) Streptomyces reticuli AbpS protein%2C 311 aa%3B fasta scores: opt: 482 z-score: 473.6 E(): 7.1e-19%3B 35.0%25 identity in 294 aa overlap. Contains various coiled-coil regions at approx. residues 42..60 and 207..251;gbkey=CDS;gene=SCE41.23c;product=hypothetical protein;protein_id=NP_627332.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3414711	3414714	.	-	.	ID=id3911;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	3414832	3414873	.	-	.	ID=id3912;Note=possible stem loop. Score 54: 18/18 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3414901	3417570	.	-	.	ID=gene3134;Dbxref=GeneID:1098549;Name=SCE41.24c;gbkey=Gene;gene=SCE41.24c;gene_biotype=protein_coding;gene_synonym=SCE41.24c;locus_tag=SCO3115
NC_003888.3	RefSeq	CDS	3414901	3417570	.	-	0	ID=cds3074;Parent=gene3134;Dbxref=Genbank:NP_627333.1,GeneID:1098549;Name=NP_627333.1;Note=SCE41.24c%2C unknown%2C len: 889 aa. High content in alanine%2C glycine and proline amino acid residues. Contains 20x degenerate repeat: (G/P/A/N)P(G/P/A);gbkey=CDS;gene=SCE41.24c;product=hypothetical protein;protein_id=NP_627333.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3415930	3416340	.	-	.	ID=id3913;Dbxref=GeneID:1098549;Note=degenerate repeat translated in SCE41.23c;gbkey=repeat_region;gene=SCE41.24c
NC_003888.3	RefSeq	sequence_feature	3416947	3417180	.	-	.	ID=id3914;Dbxref=GeneID:1098549;Note=high in alanine%2C glycine%2C proline and serine amino acid residues region;gbkey=misc_feature;gene=SCE41.24c
NC_003888.3	RefSeq	gene	3417578	3418585	.	-	.	ID=gene3135;Dbxref=GeneID:1098550;Name=SCE41.25c;gbkey=Gene;gene=SCE41.25c;gene_biotype=protein_coding;gene_synonym=SCE41.25c;locus_tag=SCO3116
NC_003888.3	RefSeq	CDS	3417578	3418585	.	-	0	ID=cds3075;Parent=gene3135;Dbxref=Genbank:NP_627334.1,GeneID:1098550;Name=NP_627334.1;Note=SCE41.25c%2C unknown%2C len: 335 aa;gbkey=CDS;gene=SCE41.25c;product=hypothetical protein;protein_id=NP_627334.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3418861	3418867	.	+	.	ID=id3915;gbkey=RBS
NC_003888.3	RefSeq	gene	3418879	3419409	.	+	.	ID=gene3136;Dbxref=GeneID:1098551;Name=SCE41.26;gbkey=Gene;gene=SCE41.26;gene_biotype=protein_coding;gene_synonym=SCE41.26;locus_tag=SCO3117
NC_003888.3	RefSeq	CDS	3418879	3419409	.	+	0	ID=cds3076;Parent=gene3136;Dbxref=Genbank:NP_627335.1,GeneID:1098551;Name=NP_627335.1;Note=SCE41.26%2C unknown%2C len: 176 aa;gbkey=CDS;gene=SCE41.26;product=hypothetical protein;protein_id=NP_627335.1;transl_table=11
NC_003888.3	RefSeq	gene	3419502	3419999	.	+	.	ID=gene3137;Dbxref=GeneID:1098552;Name=SCE41.27;gbkey=Gene;gene=SCE41.27;gene_biotype=protein_coding;gene_synonym=SCE41.27;locus_tag=SCO3118
NC_003888.3	RefSeq	CDS	3419502	3419999	.	+	0	ID=cds3077;Parent=gene3137;Dbxref=Genbank:NP_627336.1,GeneID:1098552;Name=NP_627336.1;Note=SCE41.27%2C unknown%2C len: 165 aa;gbkey=CDS;gene=SCE41.27;product=hypothetical protein;protein_id=NP_627336.1;transl_table=11
NC_003888.3	RefSeq	gene	3420021	3421340	.	-	.	ID=gene3138;Dbxref=GeneID:1098553;Name=SCE41.28c;gbkey=Gene;gene=SCE41.28c;gene_biotype=protein_coding;gene_synonym=SCE41.28c;locus_tag=SCO3119
NC_003888.3	RefSeq	CDS	3420021	3421340	.	-	0	ID=cds3078;Parent=gene3138;Dbxref=Genbank:NP_627337.1,GeneID:1098553;Name=NP_627337.1;Note=SCE41.28c%2C possible sensor kinase%2C len: 439 aa%3B similar to TR:O86631 (EMBL:AL031155) Streptomyces coelicolor two-component sensor SC3A7.30%2C 429 aa%3B fasta scores: opt: 296 z-score: 316.7 E(): 3.9e-10%3B 32.9%25 identity in 395 aa overlap. Contains possible hydrophobic membrane spanning regions at N-terminal domain;gbkey=CDS;gene=SCE41.28c;product=hypothetical protein;protein_id=NP_627337.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3421342	3421346	.	-	.	ID=id3916;gbkey=RBS
NC_003888.3	RefSeq	gene	3421849	3422058	.	-	.	ID=gene3139;Dbxref=GeneID:1098554;Name=SCE41.29c;gbkey=Gene;gene=SCE41.29c;gene_biotype=protein_coding;gene_synonym=SCE41.29c;locus_tag=SCO3120
NC_003888.3	RefSeq	CDS	3421849	3422058	.	-	0	ID=cds3079;Parent=gene3139;Dbxref=Genbank:NP_627338.1,GeneID:1098554;Name=NP_627338.1;Note=SCE41.29c%2C unknown%2C len: 69 aa;gbkey=CDS;gene=SCE41.29c;product=hypothetical protein;protein_id=NP_627338.1;transl_table=11
NC_003888.3	RefSeq	gene	3422071	3422199	.	+	.	ID=gene3140;Dbxref=GeneID:1098555;Name=SCE41.30;gbkey=Gene;gene=SCE41.30;gene_biotype=protein_coding;gene_synonym=SCE41.30;locus_tag=SCO3121
NC_003888.3	RefSeq	CDS	3422071	3422199	.	+	0	ID=cds3080;Parent=gene3140;Dbxref=Genbank:NP_627339.1,GeneID:1098555;Name=NP_627339.1;Note=SCE41.30%2C unknown%2C len: 42 aa. Doubtful CDS%2C TBparse predicted;gbkey=CDS;gene=SCE41.30;product=hypothetical protein;protein_id=NP_627339.1;transl_table=11
NC_003888.3	RefSeq	gene	3422227	3422299	.	+	.	ID=gene3141;Dbxref=GeneID:3240028;Name=SCOt25;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt25
NC_003888.3	RefSeq	tRNA	3422227	3422299	.	+	.	ID=rna35;Parent=gene3141;Dbxref=GeneID:3240028;Note=tRNA Pseudo anticodon TTG%2C Cove score 42.02;gbkey=tRNA;product=tRNA-OTHER
NC_003888.3	RefSeq	exon	3422227	3422299	.	+	.	ID=id3917;Parent=rna35;Dbxref=GeneID:3240028;Note=tRNA Pseudo anticodon TTG%2C Cove score 42.02;gbkey=tRNA;product=tRNA-OTHER
NC_003888.3	RefSeq	gene	3422409	3423857	.	+	.	ID=gene3142;Dbxref=GeneID:1098556;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;gene_synonym=SCE41.31,SCE66.01;locus_tag=SCO3122
NC_003888.3	RefSeq	CDS	3422409	3423857	.	+	0	ID=cds3081;Parent=gene3142;Dbxref=Genbank:NP_733593.1,GeneID:1098556;Name=NP_733593.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=NP_733593.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3423228	3423281	.	+	.	ID=id3918;Dbxref=GeneID:1098556;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 6.20%2C E-value 1.1e+02;gbkey=misc_feature;gene=glmU
NC_003888.3	RefSeq	sequence_feature	3423282	3423335	.	+	.	ID=id3919;Dbxref=GeneID:1098556;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 8.40%2C E-value 55;gbkey=misc_feature;gene=glmU
NC_003888.3	RefSeq	sequence_feature	3423381	3423434	.	+	.	ID=id3920;Dbxref=GeneID:1098556;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 7.90%2C E-value 65;gbkey=misc_feature;gene=glmU
NC_003888.3	RefSeq	sequence_feature	3423486	3423539	.	+	.	ID=id3921;Dbxref=GeneID:1098556;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 3.80%2C E-value 2.3e+02;gbkey=misc_feature;gene=glmU
NC_003888.3	RefSeq	sequence_feature	3423666	3423719	.	+	.	ID=id3922;Dbxref=GeneID:1098556;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 6.80%2C E-value 93;gbkey=misc_feature;gene=glmU
NC_003888.3	RefSeq	ribosome_entry_site	3423976	3423980	.	+	.	ID=id3923;gbkey=RBS
NC_003888.3	RefSeq	gene	3423989	3424963	.	+	.	ID=gene3143;Dbxref=GeneID:1098557;Name=prsA2;gbkey=Gene;gene=prsA2;gene_biotype=protein_coding;gene_synonym=prsA2,SCE66.02;locus_tag=SCO3123
NC_003888.3	RefSeq	CDS	3423989	3424963	.	+	0	ID=cds3082;Parent=gene3143;Dbxref=Genbank:NP_627340.1,GeneID:1098557;Name=NP_627340.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;gene=prsA2;product=ribose-phosphate pyrophosphokinase;protein_id=NP_627340.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3424415	3424831	.	+	.	ID=id3924;Dbxref=GeneID:1098557;Note=Pfam match to entry PF00156 Pribosyltran%2C Phosphoribosyl transferase domain%2C score 100.60%2C E-value 3e-26;gbkey=misc_feature;gene=prsA2
NC_003888.3	RefSeq	sequence_feature	3424661	3424699	.	+	.	ID=id3925;Dbxref=GeneID:1098557;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature;gbkey=misc_feature;gene=prsA2
NC_003888.3	RefSeq	stem_loop	3425016	3425075	.	+	.	ID=id3926;Note=Score 52: 20/22 ( 90%25) matches%2C 0 gaps%2C 16 base loop;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	3425166	3425170	.	+	.	ID=id3927;gbkey=RBS
NC_003888.3	RefSeq	gene	3425176	3425772	.	+	.	ID=gene3144;Dbxref=GeneID:1098558;Name=SCE66.03;gbkey=Gene;gene=SCE66.03;gene_biotype=protein_coding;gene_synonym=SCE66.03;locus_tag=SCO3124
NC_003888.3	RefSeq	CDS	3425176	3425772	.	+	0	ID=cds3083;Parent=gene3144;Dbxref=Genbank:NP_627341.1,GeneID:1098558;Name=NP_627341.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;gene=SCE66.03;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=NP_627341.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3425191	3425448	.	+	.	ID=id3928;Dbxref=GeneID:1098558;Note=Pfam match to entry PF01386 Ribosomal_L25p%2C Ribosomal L25p family%2C score 94.50%2C E-value 2.2e-24;gbkey=misc_feature;gene=SCE66.03
NC_003888.3	RefSeq	sequence_feature	3425356	3425379	.	+	.	ID=id3929;Dbxref=GeneID:1098558;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE66.03
NC_003888.3	RefSeq	ribosome_entry_site	3425870	3425875	.	+	.	ID=id3930;gbkey=RBS
NC_003888.3	RefSeq	gene	3425878	3426480	.	+	.	ID=gene3145;Dbxref=GeneID:1098559;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;gene_synonym=pth,SCE66.04;locus_tag=SCO3125
NC_003888.3	RefSeq	CDS	3425878	3426480	.	+	0	ID=cds3084;Parent=gene3145;Dbxref=Genbank:NP_627342.1,GeneID:1098559;Name=NP_627342.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;gene=pth;product=peptidyl-tRNA hydrolase;protein_id=NP_627342.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3425908	3426474	.	+	.	ID=id3931;Dbxref=GeneID:1098559;Note=Pfam match to entry PF01195 Pept_tRNA_hydro%2C Peptidyl-tRNA hydrolase%2C score 261.90%2C E-value 8.4e-75;gbkey=misc_feature;gene=pth
NC_003888.3	RefSeq	sequence_feature	3426241	3426273	.	+	.	ID=id3932;Dbxref=GeneID:1098559;Note=PS01196 Peptidyl-tRNA hydrolase signature 2;gbkey=misc_feature;gene=pth
NC_003888.3	RefSeq	gene	3426533	3427051	.	+	.	ID=gene3146;Dbxref=GeneID:1098560;Name=SCE66.05;gbkey=Gene;gene=SCE66.05;gene_biotype=protein_coding;gene_synonym=SCE66.05;locus_tag=SCO3126
NC_003888.3	RefSeq	CDS	3426533	3427051	.	+	0	ID=cds3085;Parent=gene3146;Dbxref=Genbank:NP_627343.1,GeneID:1098560;Name=NP_627343.1;Note=SCE66.05%2C possible membrane protein%2C len: 172aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCE66.05;product=hypothetical protein;protein_id=NP_627343.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3427069	3427117	.	+	.	ID=id3933;Note=Score 59: 21/22 ( 95%25) matches%2C 0 gaps%2C 6 base loop;gbkey=stem_loop
NC_003888.3	RefSeq	sequence_feature	3427121	3431045	.	-	.	ID=id3934;Note=Region previously sequenced as EMBL:AF177946;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3427132	3429867	.	-	.	ID=gene3147;Dbxref=GeneID:1098561;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;gene_synonym=ppc,SCE66.06c;locus_tag=SCO3127
NC_003888.3	RefSeq	CDS	3427132	3429867	.	-	0	ID=cds3086;Parent=gene3147;Dbxref=Genbank:NP_627344.1,GeneID:1098561;Name=NP_627344.1;Note=SCE66.06c%2C ppc%2C phosphoenolpyruvate carboxylase (EC 4.1.1.31)%2C len: 911 aa%3B previously sequenced as TR:Q9RNU9 (EMBL:AF177946). Strongly similar to many others eg. SW:O32483 (CAPP_RHOPA) from Rhodopseudomonas palustris (936 aa) fasta scores%3B opt: 1801%2C z-score: 1974.8%2C E(): 0%2C 38.4%25 identity in 948 aa overlap. Contains Pfam match to entry PF00311 PEPcase%2C Phosphoenolpyruvate carboxylase and Prosite match to PS00781 Phosphoenolpyruvate carboxylase active site 1.;gbkey=CDS;gene=ppc;product=phosphoenolpyruvate carboxylase;protein_id=NP_627344.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3427228	3429516	.	-	.	ID=id3935;Dbxref=GeneID:1098561;Note=Pfam match to entry PF00311 PEPcase%2C Phosphoenolpyruvate carboxylase%2C score 359.40%2C E-value 2.3e-107;gbkey=misc_feature;gene=ppc
NC_003888.3	RefSeq	sequence_feature	3429436	3429471	.	-	.	ID=id3936;Dbxref=GeneID:1098561;Note=PS00781 Phosphoenolpyruvate carboxylase active site 1;gbkey=misc_feature;gene=ppc
NC_003888.3	RefSeq	ribosome_entry_site	3429876	3429881	.	-	.	ID=id3937;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3430166	3430170	.	+	.	ID=id3938;gbkey=RBS
NC_003888.3	RefSeq	gene	3430174	3431184	.	+	.	ID=gene3148;Dbxref=GeneID:1098562;Name=SCE66.07;gbkey=Gene;gene=SCE66.07;gene_biotype=protein_coding;gene_synonym=SCE66.07;locus_tag=SCO3128
NC_003888.3	RefSeq	CDS	3430174	3431184	.	+	0	ID=cds3087;Parent=gene3148;Dbxref=Genbank:NP_627345.1,GeneID:1098562;Name=NP_627345.1;Note=SCE66.07%2C possible fatty acid desaturase (membrane)%2C len: 336 aa%3B similar to many (mainly eukaryotic) e.g. SW:O00767 (ACOD_HUMAN) acyl-CoA desaturase (EC 1.14.99.5) from Homo sapiens (Human) (359 aa) fasta scores%3B opt: 409%2C z-score: 480.0%2C E(): 2.9e-19%2C 29.7%25 identity in 330 aa overlap. Contains Pfam match to entry PF01069 Desaturase%2C Fatty acid desaturase and possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCE66.07;product=fatty acid desaturase (membrane);protein_id=NP_627345.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3430288	3431049	.	+	.	ID=id3939;Dbxref=GeneID:1098562;Note=Pfam match to entry PF01069 Desaturase%2C Fatty acid desaturase%2C score 198.40%2C E-value 1.1e-55;gbkey=misc_feature;gene=SCE66.07
NC_003888.3	RefSeq	ribosome_entry_site	3431173	3431179	.	+	.	ID=id3940;Dbxref=GeneID:1098562;gbkey=RBS;gene=SCE66.07
NC_003888.3	RefSeq	gene	3431181	3431858	.	+	.	ID=gene3149;Dbxref=GeneID:1098563;Name=SCE66.08;gbkey=Gene;gene=SCE66.08;gene_biotype=protein_coding;gene_synonym=SCE66.08;locus_tag=SCO3129
NC_003888.3	RefSeq	CDS	3431181	3431858	.	+	0	ID=cds3088;Parent=gene3149;Dbxref=Genbank:NP_627346.1,GeneID:1098563;Name=NP_627346.1;Note=SCE66.08%2C possible TetR-family transcriptional regulator%2C len: 225 aa%3B similar to many proposed transcriptional regulators e.g. TR:Q9RYK4 (EMBL:AE001863) transcriptional regulator%2C TetR-family from Deinococcus radiodurans (239 aa) fasta scores%3B opt: 318%2C z-score: 386.8%2C E(): 4.6e-14%2C 32.7%25 identity in 208 aa overlap. Also similar to TR:P96381 (EMBL:Z92539) hypothetical protein from Mycobacterium tuberculosis (197 aa) fasta scores%3B opt: 827%2C z-score: 991.9%2C E(): 0%2C 64.4%25 identity in 194 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and helix-turn-helix motif (Score 1473 (+4.20 SD) in SCE66.08 at residues 51-72;gbkey=CDS;gene=SCE66.08;product=TetR family transcriptional regulator;protein_id=NP_627346.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3431283	3431423	.	+	.	ID=id3941;Dbxref=GeneID:1098563;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 64.10%2C E-value 3e-15;gbkey=misc_feature;gene=SCE66.08
NC_003888.3	RefSeq	ribosome_entry_site	3431885	3431888	.	+	.	ID=id3942;gbkey=RBS
NC_003888.3	RefSeq	gene	3431891	3433066	.	+	.	ID=gene3150;Dbxref=GeneID:1098564;Name=SCE66.09;gbkey=Gene;gene=SCE66.09;gene_biotype=protein_coding;gene_synonym=SCE66.09;locus_tag=SCO3130
NC_003888.3	RefSeq	CDS	3431891	3433066	.	+	0	ID=cds3089;Parent=gene3150;Dbxref=Genbank:NP_627347.1,GeneID:1098564;Name=NP_627347.1;Note=SCE66.09%2C possible dehydratase%2C len: 391 aa%3B similar to many e.g. SW:P31572 (CAIB_ECOLI) L-carnitine dehydratase from Escherichia coli (405 aa) fasta scores%3B opt: 440%2C z-score: 478.4%2C E(): 3.6e-19%2C 28.7%25 identity in 401 aa overlap.;gbkey=CDS;gene=SCE66.09;product=dehydratase;protein_id=NP_627347.1;transl_table=11
NC_003888.3	RefSeq	gene	3433079	3433456	.	-	.	ID=gene3151;Dbxref=GeneID:1098565;Name=SCE66.10c;gbkey=Gene;gene=SCE66.10c;gene_biotype=protein_coding;gene_synonym=SCE66.10c;locus_tag=SCO3131
NC_003888.3	RefSeq	CDS	3433079	3433456	.	-	0	ID=cds3090;Parent=gene3151;Dbxref=Genbank:NP_627348.1,GeneID:1098565;Name=NP_627348.1;Note=SCE66.10c%2C unknown%2C len: 125aa%3B similar to TR:Q9RY42 (EMBL:AE001873) hypothetical protein from Deinococcus radiodurans;gbkey=CDS;gene=SCE66.10c;product=hypothetical protein;protein_id=NP_627348.1;transl_table=11
NC_003888.3	RefSeq	gene	3433453	3434364	.	-	.	ID=gene3152;Dbxref=GeneID:1098566;Name=SCE66.11c;gbkey=Gene;gene=SCE66.11c;gene_biotype=protein_coding;gene_synonym=SCE66.11c;locus_tag=SCO3132
NC_003888.3	RefSeq	CDS	3433453	3434364	.	-	0	ID=cds3091;Parent=gene3152;Dbxref=Genbank:NP_627349.1,GeneID:1098566;Name=NP_627349.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;gene=SCE66.11c;product=trans-aconitate 2-methyltransferase;protein_id=NP_627349.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3433461	3433466	.	-	.	ID=id3943;Dbxref=GeneID:1098566;gbkey=RBS;gene=SCE66.11c
NC_003888.3	RefSeq	ribosome_entry_site	3434369	3434373	.	-	.	ID=id3944;gbkey=RBS
NC_003888.3	RefSeq	gene	3434529	3435026	.	+	.	ID=gene3153;Dbxref=GeneID:1098567;Name=SCE66.12;gbkey=Gene;gene=SCE66.12;gene_biotype=protein_coding;gene_synonym=SCE66.12;locus_tag=SCO3133
NC_003888.3	RefSeq	CDS	3434529	3435026	.	+	0	ID=cds3092;Parent=gene3153;Dbxref=Genbank:NP_627350.1,GeneID:1098567;Name=NP_627350.1;Note=SCE66.12%2C probable MarR-family regulator%2C len: 165 aa%3B similar to many e.g. SW:P42195 (PECS_ERWCH) regulatory protein PecS from Erwinia chrysanthemi (166 aa) fasta scores%3B opt: 412%2C z-score: 499.8%2C E(): 2.3e-20%2C 42.7%25 identity in 150 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family.;gbkey=CDS;gene=SCE66.12;product=MarR family regulatory protein;protein_id=NP_627350.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3434676	3434996	.	+	.	ID=id3945;Dbxref=GeneID:1098567;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 87.70%2C E-value 2.3e-22;gbkey=misc_feature;gene=SCE66.12
NC_003888.3	RefSeq	gene	3434985	3435941	.	-	.	ID=gene3154;Dbxref=GeneID:1098568;Name=SCE66.13c;gbkey=Gene;gene=SCE66.13c;gene_biotype=protein_coding;gene_synonym=SCE66.13c;locus_tag=SCO3134
NC_003888.3	RefSeq	CDS	3434985	3435941	.	-	0	ID=cds3093;Parent=gene3154;Dbxref=Genbank:NP_627351.1,GeneID:1098568;Name=NP_627351.1;Note=SCE66.13c%2C possible two-component system response regulator%2C len: 318 aa%3B similar to many proposed regulators e.g. TR:Q9RI42 (EMBL:AL109989) LuxR family transcriptional regulator (233 aa) fasta scores%3B opt: 299%2C z-score: 339.4%2C E(): 2e-11%2C 31.6%25 identity in 234 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and helix-turn-helix motif (Score 1492 (+4.27 SD) in SCE66.13c at residue 253-274).;gbkey=CDS;gene=SCE66.13c;product=two-component system response regulator;protein_id=NP_627351.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3435042	3435239	.	-	.	ID=id3946;Dbxref=GeneID:1098568;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 86.00%2C E-value 7.8e-22;gbkey=misc_feature;gene=SCE66.13c
NC_003888.3	RefSeq	sequence_feature	3435345	3435755	.	-	.	ID=id3947;Dbxref=GeneID:1098568;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 59.00%2C E-value 1e-13;gbkey=misc_feature;gene=SCE66.13c
NC_003888.3	RefSeq	gene	3436004	3436459	.	+	.	ID=gene3155;Dbxref=GeneID:1098569;Name=SCE66.14;gbkey=Gene;gene=SCE66.14;gene_biotype=protein_coding;gene_synonym=SCE66.14;locus_tag=SCO3135
NC_003888.3	RefSeq	CDS	3436004	3436459	.	+	0	ID=cds3094;Parent=gene3155;Dbxref=Genbank:NP_627352.1,GeneID:1098569;Name=NP_627352.1;Note=SCE66.14%2C probable acetyltransferase%2C len: 151 aa%3B similar to many especially SW:P19997 (BLS_STRSJ) blasticidin S-acetyltransferase (confers resistance to blasticidin S antibiotic) from Streptoverticillium sp. (strain JCM4673) (136 aa) fasta scores%3B opt: 465%2C z-score: 599.3%2C E(): 6.6e-26%2C 57.3%25 identity in 131 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCE66.14;product=acetyltransferase;protein_id=NP_627352.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3436019	3436390	.	+	.	ID=id3948;Dbxref=GeneID:1098569;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 30.00%2C E-value 5.4e-05;gbkey=misc_feature;gene=SCE66.14
NC_003888.3	RefSeq	gene	3436463	3437626	.	-	.	ID=gene3156;Dbxref=GeneID:1098570;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;gene_synonym=galK,SCE66.15c;locus_tag=SCO3136
NC_003888.3	RefSeq	CDS	3436463	3437626	.	-	0	ID=cds3095;Parent=gene3156;Dbxref=Genbank:NP_627353.1,GeneID:1098570;Name=NP_627353.1;Note=SCE66.15c%2C galK%2C galactokinase (EC 2.7.1.6)%2C len: 387aa%3B strongly similar to many eg. SW:P13227 (GAL1_STRLI) galactokinase from Streptomyces lividans (397 aa) fasta scores%3B opt: 2131%2C z-score: 2454.6%2C E(): 0%2C 88.8%25 identity in 383 aa overlap. Contains Pfam match to entry PF00288 GHMP_kinases%2C GHMP kinases ATP-binding proteins%2C Prosite match to PS00627 GHMP kinases ATP-binding domain and Prosite match to PS00106 Galactokinase signature.;gbkey=CDS;gene=galK;product=galactokinase;protein_id=NP_627353.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3437123	3437350	.	-	.	ID=id3949;Dbxref=GeneID:1098570;Note=Pfam match to entry PF00288 GHMP_kinases%2C GHMP kinases ATP-binding proteins%2C score 91.40%2C E-value 1.9e-24;gbkey=misc_feature;gene=galK
NC_003888.3	RefSeq	sequence_feature	3437228	3437263	.	-	.	ID=id3950;Dbxref=GeneID:1098570;Note=PS00627 GHMP kinases ATP-binding domain;gbkey=misc_feature;gene=galK
NC_003888.3	RefSeq	sequence_feature	3437507	3437542	.	-	.	ID=id3951;Dbxref=GeneID:1098570;Note=PS00106 Galactokinase signature;gbkey=misc_feature;gene=galK
NC_003888.3	RefSeq	gene	3437662	3438627	.	-	.	ID=gene3157;Dbxref=GeneID:1098571;Name=galE1;gbkey=Gene;gene=galE1;gene_biotype=protein_coding;gene_synonym=galE1,SCE66.16c;locus_tag=SCO3137
NC_003888.3	RefSeq	CDS	3437662	3438627	.	-	0	ID=cds3096;Parent=gene3157;Dbxref=Genbank:NP_627354.1,GeneID:1098571;Name=NP_627354.1;Note=SCE66.16c%2C galE1%2C UDP-glucose 4-epimerase (EC 5.1.3.2)%2C len: 321aa%3B strongly similar to many eg. SW:P13226 (GALE_STRLI) UDP-glucose 4-epimerase from Streptomyces lividans (329 aa) fasta scores%3B opt: 1791%2C z-score: 2020.5%2C E(): 0%2C 89.4%25 identity in 321 aa overlap. Contains Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family.;gbkey=CDS;gene=galE1;product=UDP-glucose 4-epimerase;protein_id=NP_627354.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3437671	3438615	.	-	.	ID=id3952;Dbxref=GeneID:1098571;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 458.40%2C E-value 6e-134;gbkey=misc_feature;gene=galE1
NC_003888.3	RefSeq	gene	3438624	3439685	.	-	.	ID=gene3158;Dbxref=GeneID:1098572;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;gene_synonym=galT,SCE66.17c;locus_tag=SCO3138
NC_003888.3	RefSeq	CDS	3438624	3439685	.	-	0	ID=cds3097;Parent=gene3158;Dbxref=Genbank:NP_627355.1,GeneID:1098572;Name=NP_627355.1;Note=SCE66.17c%2C galT%2C galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)%2C len: 353aa%3B similar to many especially SW:P13212 (GAL7_STRLI) galactose-1-phosphate uridylyltransferase from Streptomyces lividans (354 aa) fasta scores%3B opt: 1998%2C z-score: 2363.0%2C E(): 0%2C 87.2%25 identity in 352 aa overlap. Contains Pfam match to entry PF01087 GalP_UDP_transf%2C Galactose-1-phosphate uridyl transferase and Prosite match to PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature.;gbkey=CDS;gene=galT;product=galactose-1-phosphate uridylyltransferase;protein_id=NP_627355.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3438635	3438640	.	-	.	ID=id3953;Dbxref=GeneID:1098572;gbkey=RBS;gene=galT
NC_003888.3	RefSeq	sequence_feature	3438759	3439682	.	-	.	ID=id3954;Dbxref=GeneID:1098572;Note=Pfam match to entry PF01087 GalP_UDP_transf%2C Galactose-1-phosphate uridyl transferase%2C score 451.80%2C E-value 5.7e-132;gbkey=misc_feature;gene=galT
NC_003888.3	RefSeq	sequence_feature	3439173	3439226	.	-	.	ID=id3955;Dbxref=GeneID:1098572;Note=PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature;gbkey=misc_feature;gene=galT
NC_003888.3	RefSeq	ribosome_entry_site	3439693	3439697	.	-	.	ID=id3956;gbkey=RBS
NC_003888.3	RefSeq	gene	3439885	3441573	.	+	.	ID=gene3159;Dbxref=GeneID:1098573;Name=SCE66.18;gbkey=Gene;gene=SCE66.18;gene_biotype=protein_coding;gene_synonym=SCE66.18;locus_tag=SCO3139
NC_003888.3	RefSeq	CDS	3439885	3441573	.	+	0	ID=cds3098;Parent=gene3159;Dbxref=Genbank:NP_627356.1,GeneID:1098573;Name=NP_627356.1;Note=SCE66.18%2C possible sodium:solute symporter%2C len: 562aa%3B similar to many eg. SW:P96169 (SGLT_VIBPA) sodium/glucose co-transporter from Vibrio parahaemolyticus (543 aa) fasta scores%3B opt: 538%2C z-score: 594.1%2C E(): 1.3e-25%2C 27.8%25 identity in 479 aa overlap. Contains Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family and possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCE66.18;product=sodium:solute symporter;protein_id=NP_627356.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3440032	3441261	.	+	.	ID=id3957;Dbxref=GeneID:1098573;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score 90.00%2C E-value 4.9e-23;gbkey=misc_feature;gene=SCE66.18
NC_003888.3	RefSeq	gene	3441595	3441891	.	+	.	ID=gene3160;Dbxref=GeneID:1098574;Name=SCE66.19;gbkey=Gene;gene=SCE66.19;gene_biotype=protein_coding;gene_synonym=SCE66.19;locus_tag=SCO3140
NC_003888.3	RefSeq	CDS	3441595	3441891	.	+	0	ID=cds3099;Parent=gene3160;Dbxref=Genbank:NP_627357.1,GeneID:1098574;Name=NP_627357.1;Note=SCE66.19%2C possible membrane protein%2C len: 98aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCE66.19;product=hypothetical protein;protein_id=NP_627357.1;transl_table=11
NC_003888.3	RefSeq	gene	3441921	3442073	.	+	.	ID=gene3161;Dbxref=GeneID:1098575;Name=SCE66.20;gbkey=Gene;gene=SCE66.20;gene_biotype=protein_coding;gene_synonym=SCE66.20;locus_tag=SCO3141
NC_003888.3	RefSeq	CDS	3441921	3442073	.	+	0	ID=cds3100;Parent=gene3161;Dbxref=Genbank:NP_627358.1,GeneID:1098575;Name=NP_627358.1;Note=SCE66.20%2C unknown%2C partial CDS%2C len: 50 aa%3B similar region of SC5F7.16 TR:Q9S2Q1 (EMBL:AL096872) hypothetical protein from Streptomyces coelicolor (140 aa) fasta scores%3B opt: 221%2C z-score: 268.2%2C E(): 1.9e-07%2C 69.6%25 identity in 46 aa overlap.;gbkey=CDS;gene=SCE66.20;partial=true;product=hypothetical protein;protein_id=NP_627358.1;start_range=.,3441921;transl_table=11
NC_003888.3	RefSeq	gene	3442013	3442183	.	+	.	ID=gene3162;Dbxref=GeneID:1098576;Name=SCE66.21;gbkey=Gene;gene=SCE66.21;gene_biotype=protein_coding;gene_synonym=SCE66.21;locus_tag=SCO3142
NC_003888.3	RefSeq	CDS	3442013	3442183	.	+	0	ID=cds3101;Parent=gene3162;Dbxref=Genbank:NP_627359.1,GeneID:1098576;Name=NP_627359.1;Note=SCE66.21%2C unknown%2C partial CDS%2C len: 57 aa%3B similar region of SC5F7.16 TR:Q9S2Q1 (EMBL:AL096872) hypothetical protein from Streptomyces coelicolor (140 aa) fasta scores%3B opt: 207%2C z-score: 278.8%2C E(): 4.8e-08%2C 69.4%25 identity in 49 aa overlap.;end_range=3442183,.;gbkey=CDS;gene=SCE66.21;partial=true;product=hypothetical protein;protein_id=NP_627359.1;start_range=.,3442013;transl_table=11
NC_003888.3	RefSeq	stem_loop	3442117	3442229	.	+	.	ID=id3958;Note=Score 57: 23/26 ( 88%25) matches%2C 0 gaps%2C 40 base loop;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3442183	3442347	.	+	.	ID=gene3163;Dbxref=GeneID:1098577;Name=SCE66.22;gbkey=Gene;gene=SCE66.22;gene_biotype=protein_coding;gene_synonym=SCE66.22;locus_tag=SCO3143
NC_003888.3	RefSeq	CDS	3442183	3442347	.	+	0	ID=cds3102;Parent=gene3163;Dbxref=Genbank:NP_627360.1,GeneID:1098577;Name=NP_627360.1;Note=SCE66.22%2C unknown%2C partial CDS%2C len: 55 aa%3B similar region of SC5F7.15 TR:Q9S2Q0 (EMBL:AL096872) hypothetical protein from Streptomyces coelicolor (234 aa) fasta scores%3B opt: 237%2C z-score: 237.2%2C E(): 9.9e-06%2C 59.0%25 identity in 61 aa overlap.;end_range=3442347,.;gbkey=CDS;gene=SCE66.22;partial=true;product=hypothetical protein;protein_id=NP_627360.1;start_range=.,3442183;transl_table=11
NC_003888.3	RefSeq	gene	3442302	3442976	.	-	.	ID=gene3164;Dbxref=GeneID:1098578;Name=SCE66.23;gbkey=Gene;gene=SCE66.23;gene_biotype=protein_coding;gene_synonym=SCE66.23;locus_tag=SCO3144
NC_003888.3	RefSeq	CDS	3442302	3442976	.	-	0	ID=cds3103;Parent=gene3164;Dbxref=Genbank:NP_627361.1,GeneID:1098578;Name=NP_627361.1;Note=SCE66.23%2C possible two-component system response regulator%2C len: 224aa%3B similar to many proposed regulators eg. TR:O53856 (EMBL:AL022004) response regulator from Mycobacterium tuberculosis (216 aa) fasta scores%3B opt: 352%2C z-score: 397.3%2C E(): 1.2e-14%2C 36.9%25 identity in 217 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family;gbkey=CDS;gene=SCE66.23;product=two-component system response regulator;protein_id=NP_627361.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3442323	3442520	.	-	.	ID=id3959;Dbxref=GeneID:1098578;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 71.90%2C E-value 1.4e-17;gbkey=misc_feature;gene=SCE66.23
NC_003888.3	RefSeq	sequence_feature	3442629	3442970	.	-	.	ID=id3960;Dbxref=GeneID:1098578;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 8.20%2C E-value 0.00091;gbkey=misc_feature;gene=SCE66.23
NC_003888.3	RefSeq	ribosome_entry_site	3442984	3442988	.	-	.	ID=id3961;gbkey=RBS
NC_003888.3	RefSeq	gene	3443196	3444689	.	-	.	ID=gene3165;Dbxref=GeneID:1098579;Name=SCE66.24c;gbkey=Gene;gene=SCE66.24c;gene_biotype=protein_coding;gene_synonym=SCE66.24c;locus_tag=SCO3145
NC_003888.3	RefSeq	CDS	3443196	3444689	.	-	0	ID=cds3104;Parent=gene3165;Dbxref=Genbank:NP_627362.1,GeneID:1098579;Name=NP_627362.1;Note=SCE66.24c%2C possible hypothetical protein%2C len: 497 aa%3B similar to TR:Q9K3R8 (EMBL:AL359989) Streptomyces coelicolor  membrane protein SCE66.25c%2C 490 aa%3B fasta scores: opt: 430 Z-score: 424.1 E(): 5.4e-16%3B 33.012%25 identity in 518 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SCE66.24c;product=hypothetical protein;protein_id=NP_627362.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3445024	3445027	.	-	.	ID=id3962;gbkey=RBS
NC_003888.3	RefSeq	gene	3445110	3446582	.	-	.	ID=gene3166;Dbxref=GeneID:1098580;Name=SCE66.25c;gbkey=Gene;gene=SCE66.25c;gene_biotype=protein_coding;gene_synonym=SCE66.25c;locus_tag=SCO3146
NC_003888.3	RefSeq	CDS	3445110	3446582	.	-	0	ID=cds3105;Parent=gene3166;Dbxref=Genbank:NP_627363.1,GeneID:1098580;Name=NP_627363.1;Note=SCE66.25c%2C possible hypothetical protein%2C len: 490 aa%3B similar to TR:Q9K3R9 (EMBL:AL359989) Streptomyces coelicolor  membrane protein SCE66.24c%2C 497 aa%3B fasta scores: opt: 430 Z-score: 454.0 E(): 1.2e-17%3B 33.140%25 identity) in 516 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SCE66.25c;product=hypothetical protein;protein_id=NP_627363.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3446925	3446931	.	-	.	ID=id3963;gbkey=RBS
NC_003888.3	RefSeq	gene	3447175	3448989	.	-	.	ID=gene3167;Dbxref=GeneID:1098581;Name=SCE66.26c;gbkey=Gene;gene=SCE66.26c;gene_biotype=protein_coding;gene_synonym=SCE66.26c;locus_tag=SCO3147
NC_003888.3	RefSeq	CDS	3447175	3448989	.	-	0	ID=cds3106;Parent=gene3167;Dbxref=Genbank:NP_627364.1,GeneID:1098581;Name=NP_627364.1;Note=SCE66.26c%2C possible ABC transporter ATP-binding subunit%2C len: 604aa%3B similar to many others eg. TR:O06476 (EMBL:D86418) from Bacillus subtilis (629 aa) fasta scores%3B opt: 1223%2C z-score: 1292.7%2C E(): 0%2C 37.0%25 identity in 638 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran%2C ABC transporter%2C three Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and two Prosite matches to PS00211 ABC transporters family signature. Also contains possible coiled-coil region 544-604aa.;gbkey=CDS;gene=SCE66.26c;product=ABC transporter ATP-binding protein;protein_id=NP_627364.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3447517	3448044	.	-	.	ID=id3964;Dbxref=GeneID:1098581;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 117.20%2C E-value 3e-31;gbkey=misc_feature;gene=SCE66.26c
NC_003888.3	RefSeq	sequence_feature	3447691	3447735	.	-	.	ID=id3965;Dbxref=GeneID:1098581;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE66.26c
NC_003888.3	RefSeq	sequence_feature	3448000	3448023	.	-	.	ID=id3966;Dbxref=GeneID:1098581;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE66.26c
NC_003888.3	RefSeq	sequence_feature	3448123	3448146	.	-	.	ID=id3967;Dbxref=GeneID:1098581;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE66.26c
NC_003888.3	RefSeq	sequence_feature	3448381	3448899	.	-	.	ID=id3968;Dbxref=GeneID:1098581;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 124.40%2C E-value 2.2e-33;gbkey=misc_feature;gene=SCE66.26c
NC_003888.3	RefSeq	sequence_feature	3448555	3448599	.	-	.	ID=id3969;Dbxref=GeneID:1098581;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE66.26c
NC_003888.3	RefSeq	sequence_feature	3448855	3448878	.	-	.	ID=id3970;Dbxref=GeneID:1098581;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE66.26c
NC_003888.3	RefSeq	ribosome_entry_site	3448994	3448998	.	-	.	ID=id3971;gbkey=RBS
NC_003888.3	RefSeq	gene	3449047	3449946	.	-	.	ID=gene3168;Dbxref=GeneID:1098582;Name=SCE66.27c;gbkey=Gene;gene=SCE66.27c;gene_biotype=protein_coding;gene_synonym=SCE66.27c;locus_tag=SCO3148
NC_003888.3	RefSeq	CDS	3449047	3449946	.	-	0	ID=cds3107;Parent=gene3168;Dbxref=Genbank:NP_627365.1,GeneID:1098582;Name=NP_627365.1;Note=catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis;gbkey=CDS;gene=SCE66.27c;product=4-diphosphocytidyl-2C-methyl-D-erythritol kinase;protein_id=NP_627365.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3449957	3449960	.	-	.	ID=id3972;gbkey=RBS
NC_003888.3	RefSeq	gene	3449961	3450821	.	-	.	ID=gene3169;Dbxref=GeneID:1098583;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;gene_synonym=SCE66.28c;locus_tag=SCO3149
NC_003888.3	RefSeq	CDS	3449961	3450821	.	-	0	ID=cds3108;Parent=gene3169;Dbxref=Genbank:NP_627366.1,GeneID:1098583;Name=NP_627366.1;Note=catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=NP_627366.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3449973	3450728	.	-	.	ID=id3973;Dbxref=GeneID:1098583;Note=Pfam match to entry PF00398 RrnaAD%2C Ribosomal RNA adenine dimethylases%2C score 164.00%2C E-value 3e-50;gbkey=misc_feature;gene=ksgA
NC_003888.3	RefSeq	sequence_feature	3450573	3450656	.	-	.	ID=id3974;Dbxref=GeneID:1098583;Note=PS01131 Ribosomal RNA adenine dimethylases signature;gbkey=misc_feature;gene=ksgA
NC_003888.3	RefSeq	gene	3450852	3452228	.	-	.	ID=gene3170;Dbxref=GeneID:1098584;Name=SCE66.29c;gbkey=Gene;gene=SCE66.29c;gene_biotype=protein_coding;gene_synonym=SCE66.29c,SCE87.01c;locus_tag=SCO3150
NC_003888.3	RefSeq	CDS	3450852	3452228	.	-	0	ID=cds3109;Parent=gene3170;Dbxref=Genbank:NP_733594.1,GeneID:1098584;Name=NP_733594.1;Note=SCE87.01c%2C unknown%2C partial CDS%2C len: > 329 aa. Similar in parts to Mycobacterium tuberculosis TR:O05594 (EMBL:Z94752) hypothetical 38.1 KD protein (362 aa)%2C fasta scores opt: 365 z-score: 372.3 E(): 2.3e-13 34.1%25 identity in 232 aa overlap and Bacillus subtilis SW:YABE_BACSU (EMBL:D26185) hypothetical 47.7 KD protein (437 aa)%2C fasta scores opt: 315 z-score: 321.5 E(): 1.5e-10 29.2%25 identity in 233 aa overlap.~SCE66.29c%2C unknown%2C partial CDS%2C len: >165aa%3B similar to TR:O05594 (EMBL:Z94752) hypothetical protein from Mycobacterium tuberculosis (362 aa) fasta scores%3B opt: 316%2C z-score: 379.7%2C E(): 1.1e-13%2C 37.8%25 identity in 156 aa overlap.;gbkey=CDS;gene=SCE66.29c;product=hypothetical protein;protein_id=NP_733594.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3452238	3452241	.	-	.	ID=id3975;gbkey=RBS
NC_003888.3	RefSeq	gene	3452316	3453206	.	-	.	ID=gene3171;Dbxref=GeneID:1098585;Name=SCE87.02c;gbkey=Gene;gene=SCE87.02c;gene_biotype=protein_coding;gene_synonym=SCE87.02c;locus_tag=SCO3151
NC_003888.3	RefSeq	CDS	3452316	3453206	.	-	0	ID=cds3110;Parent=gene3171;Dbxref=Genbank:NP_627367.1,GeneID:1098585;Name=NP_627367.1;Note=SCE87.02c%2C unknown%2C len: 296 aa. Highly similar to many hypothetical proteins including: Mycobacterium tuberculosis TR:O08343 (EMBL: Z94752) hypothetical protein YcfH (264 aa)%2C fasta scores opt: 576 z-score: 667.6 E(): 8.2e-30 42.7%25 identity in 279 aa overlap and Escherichia coli SW:YCFH_ECOLI (EMBL:AE000210) hypothetical 29.8 KD protein (265 aa)%2C fasta scores opt: 477 z-score: 554.2 E(): 1.7e-23 37.0%25 identity in 276 aa overlap. Contains a Pfam match to entry PF01026 UPF0006%2C Uncharacterized protein family;gbkey=CDS;gene=SCE87.02c;product=hypothetical protein;protein_id=NP_627367.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3452322	3453119	.	-	.	ID=id3976;Dbxref=GeneID:1098585;Note=Pfam match to entry PF01026 UPF0006%2C Uncharacterized protein family%2C score 241.70%2C E-value 1e-68;gbkey=misc_feature;gene=SCE87.02c
NC_003888.3	RefSeq	ribosome_entry_site	3453214	3453217	.	-	.	ID=id3977;gbkey=RBS
NC_003888.3	RefSeq	gene	3453247	3453684	.	-	.	ID=gene3172;Dbxref=GeneID:1098586;Name=SCE87.03c;gbkey=Gene;gene=SCE87.03c;gene_biotype=protein_coding;gene_synonym=SCE87.03c;locus_tag=SCO3152
NC_003888.3	RefSeq	CDS	3453247	3453684	.	-	0	ID=cds3111;Parent=gene3172;Dbxref=Genbank:NP_627368.1,GeneID:1098586;Name=NP_627368.1;Note=SCE87.03c%2C unknown%2C len: 145 aa.;gbkey=CDS;gene=SCE87.03c;product=hypothetical protein;protein_id=NP_627368.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3453690	3453695	.	-	.	ID=id3978;gbkey=RBS
NC_003888.3	RefSeq	gene	3453841	3454701	.	-	.	ID=gene3173;Dbxref=GeneID:1098587;Name=SCE87.04c;gbkey=Gene;gene=SCE87.04c;gene_biotype=protein_coding;gene_synonym=SCE87.04c;locus_tag=SCO3153
NC_003888.3	RefSeq	CDS	3453841	3454701	.	-	0	ID=cds3112;Parent=gene3173;Dbxref=Genbank:NP_627369.1,GeneID:1098587;Name=NP_627369.1;Note=SCE87.04c%2C conserved hypothetical protein%2C len: 286 aa. Highly similar to many including: Mycobacterium tuberculosis SW:YA03_MYCTU (EMBL:Z94752) hypothetical 29.7 KD protein RV1003 (285 aa)%2C fasta scores opt: 877 z-score: 992.7 E():0 53.6%25 identity in 278 aa overlap and Bacillus subtilis SW:YABC_BACSU (EMBL:D26185) hypothetical 33.0 KD protein (292 aa)%2C fasta scores opt: 640 z-score: 726.6 E():0 41.3%25 identity in 276 aa overlap. Contains a Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.;gbkey=CDS;gene=SCE87.04c;product=hypothetical protein;protein_id=NP_627369.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3454081	3454692	.	-	.	ID=id3979;Dbxref=GeneID:1098587;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score 133.00%2C E-value 5.5e-36;gbkey=misc_feature;gene=SCE87.04c
NC_003888.3	RefSeq	ribosome_entry_site	3454710	3454714	.	-	.	ID=id3980;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3454749	3454753	.	+	.	ID=id3981;gbkey=RBS
NC_003888.3	RefSeq	gene	3454768	3456543	.	+	.	ID=gene3174;Dbxref=GeneID:1098588;Name=SCE87.05;gbkey=Gene;gene=SCE87.05;gene_biotype=protein_coding;gene_synonym=SCE87.05;locus_tag=SCO3154
NC_003888.3	RefSeq	CDS	3454768	3456543	.	+	0	ID=cds3113;Parent=gene3174;Dbxref=Genbank:NP_627370.1,GeneID:1098588;Name=NP_627370.1;Note=SCE87.05%2C possible integral membrane protein%2C len: 591 aa. Similar to several of undefined function e.g. Mycobacterium tuberculosis TR: O05586 (EMBL: Z94752) hypothetical 55.5 KD protein (503 aa)%2C fasta scores opt: 666 z-score: 775.7 E(): 0 39.0%25 identity in 544 aa overlap and Aeropyrum pernix TR:BAA79111 (EMBL:AP000058) 418aa long hypothetical protein (418 aa)%2C fasta scores opt: 201 z-score: 235.2 E(): 9.9e-06 30.4%25 identity in 299 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCE87.05;product=hypothetical protein;protein_id=NP_627370.1;transl_table=11
NC_003888.3	RefSeq	gene	3456597	3457136	.	+	.	ID=gene3175;Dbxref=GeneID:1098589;Name=SCE87.06;gbkey=Gene;gene=SCE87.06;gene_biotype=protein_coding;gene_synonym=SCE87.06;locus_tag=SCO3155
NC_003888.3	RefSeq	CDS	3456597	3457136	.	+	0	ID=cds3114;Parent=gene3175;Dbxref=Genbank:NP_627371.1,GeneID:1098589;Name=NP_627371.1;Note=SCE87.06%2C unknown%2C len: 179 aa.;gbkey=CDS;gene=SCE87.06;product=hypothetical protein;protein_id=NP_627371.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3457353	3457357	.	+	.	ID=id3982;gbkey=RBS
NC_003888.3	RefSeq	gene	3457367	3458992	.	+	.	ID=gene3176;Dbxref=GeneID:1098590;Name=SCE87.07;gbkey=Gene;gene=SCE87.07;gene_biotype=protein_coding;gene_synonym=SCE87.07;locus_tag=SCO3156
NC_003888.3	RefSeq	CDS	3457367	3458992	.	+	0	ID=cds3115;Parent=gene3176;Dbxref=Genbank:NP_627372.1,GeneID:1098590;Name=NP_627372.1;Note=SCE87.07%2C possible penicillin-binding protein ( hypothetical protein)%2C len: 541 aa. Similar to many including: Bacillus subtilis SW:PBPB_BACSU (EMBL:L09703) penicillin-binding protein 2B (PBP-2B) (716 aa)%2C fasta scores opt: 221 z-score: 233.6 E(): 1.2e-05 26.8%25 identity in 336 aa overlap and Streptomyces coelicolor TR: CAB45623 (EMBL:AL079356)  penicillin-binding protein SC6G9.32 (485 aa)%2C fasta scores opt: 241 z-score: 257.0 E(): 6.1e-07 28.9%25 identity in 464 aa overlap. Also similar to the neighbouring CDS SCE87.08 (591 aa)%2C fasta scores opt: 653 z-score: 627.3 E(): 1.3e-29 45.1%25 identity in 550 aa overlap. Contains a Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE87.07;product=penicillin-binding protein;protein_id=NP_627372.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3458099	3458983	.	+	.	ID=id3983;Dbxref=GeneID:1098590;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 123.40%2C E-value 4.2e-33;gbkey=misc_feature;gene=SCE87.07
NC_003888.3	RefSeq	ribosome_entry_site	3459063	3459066	.	+	.	ID=id3984;gbkey=RBS
NC_003888.3	RefSeq	gene	3459077	3460852	.	+	.	ID=gene3177;Dbxref=GeneID:1098591;Name=SCE87.08;gbkey=Gene;gene=SCE87.08;gene_biotype=protein_coding;gene_synonym=SCE87.08;locus_tag=SCO3157
NC_003888.3	RefSeq	CDS	3459077	3460852	.	+	0	ID=cds3116;Parent=gene3177;Dbxref=Genbank:NP_627373.1,GeneID:1098591;Name=NP_627373.1;Note=SCE87.08%2C possible penicillin-binding protein ( hypothetical protein)%2C len: 591 aa. Similar to many including: Streptomyces clavuligerus TR:P72405 (EMBL:U56256) penicillin-binding protein PcbR (551 aa)%2C fasta scores opt: 775 z-score: 731.0 E(): 0 36.5%25 identity in 526 aa overlap and Streptomyces coelicolor TR:CAB45214 (EMBL:AL079308)  penicillin-binding protein SCH69.17 (490 aa)%2C fasta scores opt: 234 z-score: 226.4 E(): 3.1e-05 26.2%25 identity in 416 aa overlap. Also similar to the neighbouring CDS SCE87.07 (541 aa)%2C fasta scores opt: 653 z-score: 513.9 E(): 2.7e-23 45.1%25 identity in 550 aa overlap. Contains a Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE87.08;product=penicillin-binding protein;protein_id=NP_627373.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3459896	3460726	.	+	.	ID=id3985;Dbxref=GeneID:1098591;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 58.20%2C E-value 1.8e-13;gbkey=misc_feature;gene=SCE87.08
NC_003888.3	RefSeq	gene	3460797	3461177	.	-	.	ID=gene3178;Dbxref=GeneID:1098592;Name=SCE87.09c;gbkey=Gene;gene=SCE87.09c;gene_biotype=protein_coding;gene_synonym=SCE87.09c;locus_tag=SCO3158
NC_003888.3	RefSeq	CDS	3460797	3461177	.	-	0	ID=cds3117;Parent=gene3178;Dbxref=Genbank:NP_627374.1,GeneID:1098592;Name=NP_627374.1;Note=SCE87.09c%2C unknown%2C len: 126 aa. Similar to two  regulators from Streptomyces coelicolor: TR:CAB51005 (EMBL:AL096852) SCE19A.24 (142 aa)%2C fasta scores opt: 168 z-score: 227.4 E(): 2.7e-05 32.7%25 identity in 101 aa overlap and TR:CAB40672 (EMBL: AL049587) SC5F2A.05C (138 aa)%2C fasta scores opt: 222 z-score: 296.3 E(): 3.9e-09 36.0%25 identity in 114 aa overlap.;gbkey=CDS;gene=SCE87.09c;product=hypothetical protein;protein_id=NP_627374.1;transl_table=11
NC_003888.3	RefSeq	gene	3461363	3462424	.	+	.	ID=gene3179;Dbxref=GeneID:1098593;Name=SCE87.10;gbkey=Gene;gene=SCE87.10;gene_biotype=protein_coding;gene_synonym=SCE87.10;locus_tag=SCO3159
NC_003888.3	RefSeq	CDS	3461363	3462424	.	+	0	ID=cds3118;Parent=gene3179;Dbxref=Genbank:NP_627375.1,GeneID:1098593;Name=NP_627375.1;Note=SCE87.10%2C possible membrane protein%2C len: 353 aa. Weakly similar to Salmonella typhimurium SW:CBIM_SALTY (EMBL:L12006) cobalamin biosynthesis protein CbiM (245 aa)%2C fasta scores opt: 224 z-score: 251.7 E(): 1.2e-06 32.8%25 identity in 180 aa overlap. Also similar to Methanobacterium thermoautotrophicum TR: O27742 (EMBL:AE000928) cobalamin biosynthesis protein M (217 aa)%2C fasta scores opt: 495 z-score: 544.6 E(): 5.9e-23 41.4%25 identity in 220 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence;gbkey=CDS;gene=SCE87.10;product=hypothetical protein;protein_id=NP_627375.1;transl_table=11
NC_003888.3	RefSeq	gene	3462426	3463187	.	+	.	ID=gene3180;Dbxref=GeneID:1098594;Name=SCE87.11;gbkey=Gene;gene=SCE87.11;gene_biotype=protein_coding;gene_synonym=SCE87.11;locus_tag=SCO3160
NC_003888.3	RefSeq	CDS	3462426	3463187	.	+	0	ID=cds3119;Parent=gene3180;Dbxref=Genbank:NP_627376.1,GeneID:1098594;Name=NP_627376.1;Note=SCE87.11%2C possible integral membrane transport protein%2C len: 253 aa. Similar to many proteins thought to be involved in the transport of cobalt e.g. Streptomyces coelicolor TR:O54188(EMBL:AL021411) cobalt transport integral membrane protein SC7H1.29c (CbiQ) (249 aa)%2C fasta scores opt: 196 z-score: 249.6 E(): 1.6e-06 25.5%25 identity in 251 aa overlap and Methanobacterium thermoautotrophicum TR:O27740(EMBL:AE000928) cobalt transport membrane protein (261 aa)%2C fasta scores opt: 332 z-score: 417.0 E(): 7.5e-16 30.2%25 identity in 212 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCE87.11;product=integral membrane transport protein;protein_id=NP_627376.1;transl_table=11
NC_003888.3	RefSeq	gene	3463196	3463978	.	+	.	ID=gene3181;Dbxref=GeneID:1098595;Name=SCE87.12;gbkey=Gene;gene=SCE87.12;gene_biotype=protein_coding;gene_synonym=SCE87.12;locus_tag=SCO3161
NC_003888.3	RefSeq	CDS	3463196	3463978	.	+	0	ID=cds3120;Parent=gene3181;Dbxref=Genbank:NP_627377.1,GeneID:1098595;Name=NP_627377.1;Note=SCE87.12%2C possible ABC transporter%2C ATP-binding subunit%2C len: 260 aa. Highly similar to many cbiO-like proteins thought to be involved in ATP-dependent cobalt transport e.g. Methanococcus jannaschii TR:Q58488(EMBL:U67551) cobalt transport ATP-binding protein (279 aa)%2C fasta scores opt: 737 z-score: 823.3 E(): 0 45.8%25 identity in 238 aa overlap and Streptomyces coelicolor TR:O54187 (EMBL:AL021411) cobalt transport system ATP binding protein SC7H1.28c (284 aa)%2C fasta scores opt: 664 z-score: 742.6 E():0 44.4%25 identity in 261 aa overlap. Contains a possible membrane spanning hydrophobic domain and a Pfam match to entry PF00005 ABC_tran%2C ABC transporter. Also contains Prosite hits to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCE87.12;product=ABC transporter ATP-binding protein;protein_id=NP_627377.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3463319	3463861	.	+	.	ID=id3986;Dbxref=GeneID:1098595;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 191.50%2C E-value 1.4e-53;gbkey=misc_feature;gene=SCE87.12
NC_003888.3	RefSeq	sequence_feature	3463340	3463363	.	+	.	ID=id3987;Dbxref=GeneID:1098595;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE87.12
NC_003888.3	RefSeq	sequence_feature	3463643	3463687	.	+	.	ID=id3988;Dbxref=GeneID:1098595;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE87.12
NC_003888.3	RefSeq	ribosome_entry_site	3463977	3463980	.	+	.	ID=id3989;gbkey=RBS
NC_003888.3	RefSeq	gene	3463996	3465258	.	+	.	ID=gene3182;Dbxref=GeneID:1098596;Name=SCE87.13;gbkey=Gene;gene=SCE87.13;gene_biotype=protein_coding;gene_synonym=SCE87.13;locus_tag=SCO3162
NC_003888.3	RefSeq	CDS	3463996	3465258	.	+	0	ID=cds3121;Parent=gene3182;Dbxref=Genbank:NP_627378.1,GeneID:1098596;Name=NP_627378.1;Note=SCE87.13%2C possible esterase%2C len: 420 aa. Similar to several including: Streptomyces chrysomallus TR:O87861(EMBL:Z15137) esterase A (389 aa)%2C fasta scores opt: 684 z-score: 729.1 E():0 44.9%25 identity in 405 aa overlap and Pseudomonas fluorescens TR:Q53403 (EMBL:S69066) esterase III (382 aa)%2C fasta scores opt: 597 z-score: 637.2 E(): 4e-28 41.8%25 identity in 397 aa overlap.;gbkey=CDS;gene=SCE87.13;product=esterase;protein_id=NP_627378.1;transl_table=11
NC_003888.3	RefSeq	gene	3465317	3465592	.	-	.	ID=gene3183;Dbxref=GeneID:1098597;Name=SCE87.14c;gbkey=Gene;gene=SCE87.14c;gene_biotype=protein_coding;gene_synonym=SCE87.14c;locus_tag=SCO3163
NC_003888.3	RefSeq	CDS	3465317	3465592	.	-	0	ID=cds3122;Parent=gene3183;Dbxref=Genbank:NP_627379.1,GeneID:1098597;Name=NP_627379.1;Note=SCE87.14c%2C unknown%2C len: 91 aa. Similar to a hypothetical protein from Mycobacterium tuberculosis: SW:YQ32_MYCTU (EMBL:Z80225) hypothetical 10.1 KD protein (93 aa)%2C fasta scores opt: 112 z-score: 161.8 E(): 0.12 31.3%25 identity in 83 aa overlap.;gbkey=CDS;gene=SCE87.14c;product=hypothetical protein;protein_id=NP_627379.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3465596	3465605	.	-	.	ID=id3990;gbkey=RBS
NC_003888.3	RefSeq	gene	3465682	3466527	.	-	.	ID=gene3184;Dbxref=GeneID:1098598;Name=SCE87.15c;gbkey=Gene;gene=SCE87.15c;gene_biotype=protein_coding;gene_synonym=SCE87.15c;locus_tag=SCO3164
NC_003888.3	RefSeq	CDS	3465682	3466527	.	-	0	ID=cds3123;Parent=gene3184;Dbxref=Genbank:NP_627380.1,GeneID:1098598;Name=NP_627380.1;Note=SCE87.15c%2C possible integral membrane protein%2C len: 281 aa. Weakly similar to Bacillus subtilis SW:YWFM_BACSU (EMBL:X73124) hypothetical 31.3 KD protein in PTA 3'region (296 aa)%2C fasta scores opt: 157 z-score: 184.7 E(): 0.0065 22.9%25 identity in 279 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence. Also similar to TR:CAC45825 (EMBL:AL591786) Rhizobium meliloti (Sinorhizobium meliloti) hypothetical transmembrane protein SMC01807%2C 278 aa%3B fasta scores: opt: 605 Z-score: 660.4 E(): 3.7e-29%3B 38.811%25 identity in 286 aa overlap;gbkey=CDS;gene=SCE87.15c;product=hypothetical protein;protein_id=NP_627380.1;transl_table=11
NC_003888.3	RefSeq	gene	3466524	3467063	.	-	.	ID=gene3185;Dbxref=GeneID:1098599;Name=SCE87.16c;gbkey=Gene;gene=SCE87.16c;gene_biotype=protein_coding;gene_synonym=SCE87.16c;locus_tag=SCO3165
NC_003888.3	RefSeq	CDS	3466524	3467063	.	-	0	ID=cds3124;Parent=gene3185;Dbxref=Genbank:NP_627381.1,GeneID:1098599;Name=NP_627381.1;Note=SCE87.16c%2C unknown%2C len: 179 aa. Weakly similar to several including: Aeropyrum pernix TR:BAA81557 (EMBL: AP000064) 152 aa long hypothetical protein (152 aa)%2C fasta scores opt: 249 z-score: 300.9 E(): 2.2e-09 38.9%25 identity in 131 aa overlap and Streptomyces coelicolor TR:CAB51450 (EMBL:AL096884) transcriptional regulatory protein SC4G6.27 (169 aa)%2C fasta scores opt: 198 z-score: 241.6 E(): 4.4e-06 27.9%25 identity in 129 aa overlap.;gbkey=CDS;gene=SCE87.16c;product=hypothetical protein;protein_id=NP_627381.1;transl_table=11
NC_003888.3	RefSeq	gene	3467222	3469459	.	-	.	ID=gene3186;Dbxref=GeneID:1098600;Name=SCE87.17c;gbkey=Gene;gene=SCE87.17c;gene_biotype=protein_coding;gene_synonym=SCE87.17c;locus_tag=SCO3166
NC_003888.3	RefSeq	CDS	3467222	3469459	.	-	0	ID=cds3125;Parent=gene3186;Dbxref=Genbank:NP_627382.1,GeneID:1098600;Name=NP_627382.1;Note=SCE87.17c%2C possible membrane transport protein%2C len: 745 aa. Highly similar to several other Streptomyces coelicolor  transport proteins: TR:CAB56653 (EMBL:AL121596) membrane transport protein SCF51A.01C (765 aa)%2C fasta scores opt: 1664 z-score: 1670.0 E(): 0 57.8%25 identity in 760 aa overlap and TR:Q9Z577(EMBL:AL035569)  integral membrane export protein SC8D9.13 (748 aa)%2C fasta scores opt: 1382 z-score: 1387.5 E():0 40.7%25 identity in 734 aa overlap. Also similar to a number of other MMPL family membrane proteins such as: Mycobacterium leprae SW:MMLB_MYCLE(EMBL:Z95398) membrane protein MMPL11 (1014 aa)%2C fasta scores opt: 999 z-score: 1001.8 E(): 0 29.6%25 identity in 743 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE87.17c;product=membrane transport protein;protein_id=NP_627382.1;transl_table=11
NC_003888.3	RefSeq	gene	3469606	3470205	.	-	.	ID=gene3187;Dbxref=GeneID:1098601;Name=SCE87.18c;gbkey=Gene;gene=SCE87.18c;gene_biotype=protein_coding;gene_synonym=SCE87.18c;locus_tag=SCO3167
NC_003888.3	RefSeq	CDS	3469606	3470205	.	-	0	ID=cds3126;Parent=gene3187;Dbxref=Genbank:NP_627383.1,GeneID:1098601;Name=NP_627383.1;Note=SCE87.18c%2C possible tetR-family transcriptional regulator%2C len: 199 aa. Similar to many including: Propionibacterium freudenreichii TR:P72185(EMBL:U51164) repressor protein (HemR protein) (259 aa)%2C fasta scores opt: 222 z-score: 276.8 E(): 4.8e-08 30.6%25 identity in 196 aa overlap and Streptomyces coelicolor TR:CAB45568(EMBL:AL079355)  transcriptional regulator (fragment) SC4C6.04 (204 aa)%2C fasta scores opt: 539 z-score: 660.1 E(): 2.2e-29 42.9%25 identity in 191 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=CDS;gene=SCE87.18c;product=TetR family transcriptional regulator;protein_id=NP_627383.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3470044	3470148	.	-	.	ID=id3991;Dbxref=GeneID:1098601;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 22.10%2C E-value 0.00021;gbkey=misc_feature;gene=SCE87.18c
NC_003888.3	RefSeq	ribosome_entry_site	3470214	3470218	.	-	.	ID=id3992;gbkey=RBS
NC_003888.3	RefSeq	gene	3470354	3473869	.	+	.	ID=gene3188;Dbxref=GeneID:1098602;Name=SCE87.19;gbkey=Gene;gene=SCE87.19;gene_biotype=protein_coding;gene_synonym=SCE87.19;locus_tag=SCO3168
NC_003888.3	RefSeq	CDS	3470354	3473869	.	+	0	ID=cds3127;Parent=gene3188;Dbxref=Genbank:NP_627384.1,GeneID:1098602;Name=NP_627384.1;Note=SCE87.19%2C possible protease%2C len: 1171 aa. Similar to Thermoplasma acidophilum TR:P96086(EMBL:U72850) tricorn protease (1071 aa) opt: 829 z-score: 857.6 E(): 0 28.1%25 identity in 1158 aa overlap and a protein of unknown function from Sulfolobus solfataricus TR:P95871(EMBL: Y08256) ORF C06024 (1068 aa)%2C fasta scores opt: 846 z-score: 875.3 E(): 0 30.3%25 identity in 1150 aa overlap.;gbkey=CDS;gene=SCE87.19;product=protease;protein_id=NP_627384.1;transl_table=11
NC_003888.3	RefSeq	gene	3473958	3474185	.	-	.	ID=gene3189;Dbxref=GeneID:1098603;Name=SCE87.20c;gbkey=Gene;gene=SCE87.20c;gene_biotype=protein_coding;gene_synonym=SCE87.20c;locus_tag=SCO3169
NC_003888.3	RefSeq	CDS	3473958	3474185	.	-	0	ID=cds3128;Parent=gene3189;Dbxref=Genbank:NP_627385.1,GeneID:1098603;Name=NP_627385.1;Note=SCE87.20c%2C unknown%2C len: 75 aa. Note the predicted product of this CDS has an unusual amino acid composition with an excess of Arg%2C Asp and Gln residues.;gbkey=CDS;gene=SCE87.20c;product=hypothetical protein;protein_id=NP_627385.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3474195	3474199	.	-	.	ID=id3993;gbkey=RBS
NC_003888.3	RefSeq	gene	3474274	3475167	.	-	.	ID=gene3190;Dbxref=GeneID:1098604;Name=SCE87.21c;gbkey=Gene;gene=SCE87.21c;gene_biotype=protein_coding;gene_synonym=SCE87.21c;locus_tag=SCO3170
NC_003888.3	RefSeq	CDS	3474274	3475167	.	-	0	ID=cds3129;Parent=gene3190;Dbxref=Genbank:NP_627386.1,GeneID:1098604;Name=NP_627386.1;gbkey=CDS;gene=SCE87.21c;product=short chain dehydrogenase;protein_id=NP_627386.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3474601	3475143	.	-	.	ID=id3994;Dbxref=GeneID:1098604;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 173.10%2C E-value 4.4e-48;gbkey=misc_feature;gene=SCE87.21c
NC_003888.3	RefSeq	sequence_feature	3474664	3474750	.	-	.	ID=id3995;Dbxref=GeneID:1098604;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCE87.21c
NC_003888.3	RefSeq	gene	3475164	3476108	.	-	.	ID=gene3191;Dbxref=GeneID:1098605;Name=SCE87.22c;gbkey=Gene;gene=SCE87.22c;gene_biotype=protein_coding;gene_synonym=SCE87.22c;locus_tag=SCO3171
NC_003888.3	RefSeq	CDS	3475164	3476108	.	-	0	ID=cds3130;Parent=gene3191;Dbxref=Genbank:NP_627387.1,GeneID:1098605;Name=NP_627387.1;gbkey=CDS;gene=SCE87.22c;product=hydrolase;protein_id=NP_627387.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3475173	3475177	.	-	.	ID=id3996;Dbxref=GeneID:1098605;gbkey=RBS;gene=SCE87.22c
NC_003888.3	RefSeq	sequence_feature	3475224	3475907	.	-	.	ID=id3997;Dbxref=GeneID:1098605;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 59.10%2C E-value 9.5e-14;gbkey=misc_feature;gene=SCE87.22c
NC_003888.3	RefSeq	gene	3476105	3477664	.	-	.	ID=gene3192;Dbxref=GeneID:1098606;Name=SCE87.23c;gbkey=Gene;gene=SCE87.23c;gene_biotype=protein_coding;gene_synonym=SCE87.23c;locus_tag=SCO3172
NC_003888.3	RefSeq	CDS	3476105	3477664	.	-	0	ID=cds3131;Parent=gene3192;Dbxref=Genbank:NP_627388.1,GeneID:1098606;Name=NP_627388.1;Note=SCE87.23c%2C probable monooxygenase%2C len: 519 aa. Highly similar to many including: Acinetobacter sp SW:CYMO_ACISP (EMBL:M19029) cyclohexanone monooxygenase (EC 1.14.13.22) (542 aa)%2C fasta scores opt: 459 z-score: 510.7 E(): 4.5e-21 28.0%25 identity in 511 aa overlap and Mycobacterium tuberculosis TR:O53294(EMBL:AL021287) monooxygenase (524 aa)%2C fasta scores opt: 1522 z-score: 1690.4 E():0 47.4%25 identity in 485 aa overlap. Contains a Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like.;gbkey=CDS;gene=SCE87.23c;product=monooxygenase;protein_id=NP_627388.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3476113	3476120	.	-	.	ID=id3998;Dbxref=GeneID:1098606;gbkey=RBS;gene=SCE87.23c
NC_003888.3	RefSeq	sequence_feature	3476159	3477631	.	-	.	ID=id3999;Dbxref=GeneID:1098606;Note=Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like%2C score 5.70%2C E-value 1.3e-22;gbkey=misc_feature;gene=SCE87.23c
NC_003888.3	RefSeq	ribosome_entry_site	3477672	3477676	.	-	.	ID=id4000;gbkey=RBS
NC_003888.3	RefSeq	gene	3477824	3478471	.	+	.	ID=gene3193;Dbxref=GeneID:1098607;Name=SCE87.24;gbkey=Gene;gene=SCE87.24;gene_biotype=protein_coding;gene_synonym=SCE87.24;locus_tag=SCO3173
NC_003888.3	RefSeq	CDS	3477824	3478471	.	+	0	ID=cds3132;Parent=gene3193;Dbxref=Genbank:NP_627389.1,GeneID:1098607;Name=NP_627389.1;Note=SCE87.24%2C possible merR-family transcriptional regulator%2C len: 215 aa. Similar to two other transcriptional regulators from Streptomyces coelicolor TR:CAB40683 (EMBL:AL049587) SC5F2A.16C (251 aa)%2C fasta scores opt: 210 z-score: 257.9 E(): 5.4e-07 32.3%25 identity in 217 aa overlap and TR:O86531 (EMBL:AL031124) SC1C2.31C (214 aa)%2C fasta scores opt: 176 z-score: 218.8 E(): 8.2e-05 30.4%25 identity in 191 aa overlap. Contains a Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family with the helix-turn-helix motif situated between residues 8..29 (+3.90 SD).;gbkey=CDS;gene=SCE87.24;product=MerR family transcriptional regulator;protein_id=NP_627389.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3477851	3477940	.	+	.	ID=id4001;Dbxref=GeneID:1098607;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 26.70%2C E-value 0.00029;gbkey=misc_feature;gene=SCE87.24
NC_003888.3	RefSeq	gene	3478490	3479314	.	-	.	ID=gene3194;Dbxref=GeneID:1098608;Name=SCE87.25c;gbkey=Gene;gene=SCE87.25c;gene_biotype=protein_coding;gene_synonym=SCE87.25c;locus_tag=SCO3174
NC_003888.3	RefSeq	CDS	3478490	3479314	.	-	0	ID=cds3133;Parent=gene3194;Dbxref=Genbank:NP_627390.1,GeneID:1098608;Name=NP_627390.1;Note=SCE87.25c%2C possible exodeoxyribonuclease (EC 3.1.11.2) (hypothetical protein)%2C len: 274 aa. Highly similar to several e.g. Bacillus subtilis SW:EXOA_BACSU (EMBL:D26185) exodeoxyribonuclease (EC 3.1.11.2) (252 aa)%2C fasta scores opt: 592 z-score: 694.3 E(): 2.7e-31 38.6%25 identity in 267 aa overlap and Methanobacterium thermoautotrophicum TR:O26314 (EMBL:AE000808) exodeoxyribonuclease (257 aa)%2C fasta scores opt: 674 z-score: 789.1 E():0 41.6%25 identity in 262 aa overlap. Also similar to Pseudomonas aeruginosa TR:Q51380 (EMBL:U38241) catabolite repression control protein (259 aa)%2C fasta scores opt: 601 z-score: 704.5 E(): 7.2e-32 39.3%25 identity in 267 aa overlap. Contains a Pfam match to entry PF01260 AP_endonucleas1%2C AP endonuclease family 1. Note that the translational start site may be located at residue 8. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE87.25c;product=exodeoxyribonuclease;protein_id=NP_627390.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3478496	3479278	.	-	.	ID=id4002;Dbxref=GeneID:1098608;Note=Pfam match to entry PF01260 AP_endonucleas1%2C AP endonuclease family 1%2C score 207.80%2C E-value 1.6e-58;gbkey=misc_feature;gene=SCE87.25c
NC_003888.3	RefSeq	ribosome_entry_site	3479329	3479332	.	-	.	ID=id4003;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3479355	3479358	.	+	.	ID=id4004;gbkey=RBS
NC_003888.3	RefSeq	gene	3479362	3479847	.	+	.	ID=gene3195;Dbxref=GeneID:1098609;Name=SCE87.26;gbkey=Gene;gene=SCE87.26;gene_biotype=protein_coding;gene_synonym=SCE87.26;locus_tag=SCO3175
NC_003888.3	RefSeq	CDS	3479362	3479847	.	+	0	ID=cds3134;Parent=gene3195;Dbxref=Genbank:NP_627391.1,GeneID:1098609;Name=NP_627391.1;Note=SCE87.26%2C possible acetyltransferase%2C len: 161 aa. Similar to Azospirillum brasilense SW:IAAT_AZOBR (EMBL:X57853) IAA acetyltransferase (EC 2.3.1.-) (153 aa)%2C fasta scores opt: 224 z-score: 280.9 E(): 2.8e-08 36.7%25 identity in 139 aa overlap. Contains a Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCE87.26;product=acetyltransferase;protein_id=NP_627391.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3479368	3479772	.	+	.	ID=id4005;Dbxref=GeneID:1098609;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 51.50%2C E-value 1.9e-11;gbkey=misc_feature;gene=SCE87.26
NC_003888.3	RefSeq	gene	3479867	3481618	.	-	.	ID=gene3196;Dbxref=GeneID:1098610;Name=SCE87.27c;gbkey=Gene;gene=SCE87.27c;gene_biotype=protein_coding;gene_synonym=SCE87.27c;locus_tag=SCO3176
NC_003888.3	RefSeq	CDS	3479867	3481618	.	-	0	ID=cds3135;Parent=gene3196;Dbxref=Genbank:NP_627392.1,GeneID:1098610;Name=NP_627392.1;Note=SCE87.27c%2C possible membrane protein%2C len: 583 aa. Contains possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCE87.27c;product=hypothetical protein;protein_id=NP_627392.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3481786	3481830	.	-	.	ID=id4006;Note=possible stem loop with 100%25 matches over 20 bases and a loop of 5 bases;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3481839	3481912	.	-	.	ID=gene3197;Dbxref=GeneID:3240029;Name=SCOt26;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt26
NC_003888.3	RefSeq	tRNA	3481839	3481912	.	-	.	ID=rna36;Parent=gene3197;Dbxref=GeneID:3240029;Note=tRNA Ala anticodon CGC%2C Cove score 77.02;gbkey=tRNA;product=tRNA-Ala
NC_003888.3	RefSeq	exon	3481839	3481912	.	-	.	ID=id4007;Parent=rna36;Dbxref=GeneID:3240029;Note=tRNA Ala anticodon CGC%2C Cove score 77.02;gbkey=tRNA;product=tRNA-Ala
NC_003888.3	RefSeq	gene	3481968	3483236	.	-	.	ID=gene3198;Dbxref=GeneID:1098611;Name=SCE87.28c;gbkey=Gene;gene=SCE87.28c;gene_biotype=protein_coding;gene_synonym=SCE87.28c;locus_tag=SCO3177
NC_003888.3	RefSeq	CDS	3481968	3483236	.	-	0	ID=cds3136;Parent=gene3198;Dbxref=Genbank:NP_627393.1,GeneID:1098611;Name=NP_627393.1;Note=SCE87.28c%2C possible membrane protein%2C len: 422. Contains possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence. Also contains a probable coiled-coil between residues 213..240 (28 residues).;gbkey=CDS;gene=SCE87.28c;product=hypothetical protein;protein_id=NP_627393.1;transl_table=11
NC_003888.3	RefSeq	gene	3483413	3484063	.	-	.	ID=gene3199;Dbxref=GeneID:1098612;Name=SC87.29c;gbkey=Gene;gene=SC87.29c;gene_biotype=pseudogene;gene_synonym=SC87.29c;locus_tag=SCO3178;pseudo=true
NC_003888.3	RefSeq	sequence_feature	3483413	3484063	.	-	.	ID=id4008;Dbxref=GeneID:1098612;Note=SCE87.29c%2C possible acetyltransferase%2C pseudogene%2C len: 217 aa. The high level of sequence similarity to various database entries extends upstream of the last possible translational start codon suitable for this CDS. Highly similar to several including: Escherichia coli SW:RIMJ_ECOLI (EMBL:X06118) ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) (194 aa)%2C fasta scores opt: 266 z-score: 321.9 E(): 1.5e-10 30.0%25 identity in 190 aa overlap and Mycobacterium leprae TR:Q9Z5F9 (EMBL:AL035500)  acyltransferase (218 aa)%2C fasta scores opt: 560 z-score: 665.1 E(): 1.1e-29 45.4%25 identity in 194 aa overlap.%3Bacetyltransferase (pseudogene).;gbkey=misc_feature;gene=SC87.29c
NC_003888.3	RefSeq	gene	3484069	3484608	.	-	.	ID=gene3200;Dbxref=GeneID:1098613;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;gene_synonym=moaB;locus_tag=SCO3179
NC_003888.3	RefSeq	CDS	3484069	3484608	.	-	0	ID=cds3137;Parent=gene3200;Dbxref=Genbank:NP_627394.1,GeneID:1098613;Name=NP_627394.1;Note=SCE87.30c%2C moaB%2C probable molybdenum cofactor biosynthesis protein (hypothetical protein)%2C len: 179 aa. Highly similar to many including: Mycobacterium tuberculosis TR:O53877 (EMBL:AL022004) molybdopterin biosynthesis Mog protein (160 aa)%2C fasta scores opt: 617 z-score: 660.3 E(): 2.1e-29 60.0%25 identity in 160 aa overlap and the C-terminus of the Synechococcus sp MoaC%2C MoaB fusion protein SW:MOCB_SYNP7 (EMBL:X99625) molybdenum cofactor biosynthesis protein CB (319 aa)%2C fasta scores opt: 401 z-score: 430.6 E(): 1.3e-16 41.5%25 identity in 171 aa overlap. Contains a Prosite hit to PS01078 Molybdenum cofactor biosynthesis proteins signature 1 and a possible N-terminal signal sequence.;gbkey=CDS;gene=moaB;product=molybdenum cofactor biosynthesis protein;protein_id=NP_627394.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3484342	3484383	.	-	.	ID=id4009;Dbxref=GeneID:1098613;Note=PS01078 Molybdenum cofactor biosynthesis proteins signature 1;gbkey=misc_feature;gene=moaB
NC_003888.3	RefSeq	gene	3484605	3485117	.	-	.	ID=gene3201;Dbxref=GeneID:1098614;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=SCO3180
NC_003888.3	RefSeq	CDS	3484605	3485117	.	-	0	ID=cds3138;Parent=gene3201;Dbxref=Genbank:NP_627395.1,GeneID:1098614;Name=NP_627395.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=molybdenum cofactor biosynthesis protein MoaC;protein_id=NP_627395.1;transl_table=11
NC_003888.3	RefSeq	gene	3485204	3486478	.	-	.	ID=gene3202;Dbxref=GeneID:1098615;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;gene_synonym=moeA;locus_tag=SCO3181
NC_003888.3	RefSeq	CDS	3485204	3486478	.	-	0	ID=cds3139;Parent=gene3202;Dbxref=Genbank:NP_627396.1,GeneID:1098615;Name=NP_627396.1;Note=SCE87.32c%2C moeA%2C probable molybdopterin biosynthesis protein. len: 424 aa. Highly similar to many e.g. Mycobacterium tuberculosis SW:MOEA_MYCTU (EMBL:Z94752) molybdopterin biosynthesis protein (426 aa)%2C fasta scores opt: 795 z-score: 812.4 E():0 39.3%25 identity in 438 aa overlap. Contains a Pfam match to entry PF00994 MoCF_biosynth%2C Molybdenum cofactor biosynthesis protein.;gbkey=CDS;gene=moeA;product=molybdopterin biosynthesis protein;protein_id=NP_627396.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3485210	3486478	.	-	.	ID=id4010;Dbxref=GeneID:1098615;Note=Pfam match to entry PF00994 MoCF_biosynth%2C Molybdenum cofactor biosynthesis protein%2C score 463.60%2C E-value 1.6e-135;gbkey=misc_feature;gene=moeA
NC_003888.3	RefSeq	gene	3486550	3487461	.	-	.	ID=gene3203;Dbxref=GeneID:1098616;Name=gtaB;gbkey=Gene;gene=gtaB;gene_biotype=protein_coding;gene_synonym=gtaB;locus_tag=SCO3182
NC_003888.3	RefSeq	CDS	3486550	3487461	.	-	0	ID=cds3140;Parent=gene3203;Dbxref=Genbank:NP_627397.1,GeneID:1098616;Name=NP_627397.1;Note=SCE87.33c%2C gtaB%2C UTP-glucose-1-phosphate uridylyltransferase%2C len: 303 aa. Highly similar to many proteins belonging to the prokaryotic UDPGP family e.g. Bacillus subtilis SW:GTAB_BACSU (EMBL:L12272) UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (292 aa)%2C fasta scores opt: 907 z-score: 1054.0 E(): 0 47.1%25 identity in 293 aa overlap. Contains a Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase.;gbkey=CDS;gene=gtaB;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=NP_627397.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3486622	3487434	.	-	.	ID=id4011;Dbxref=GeneID:1098616;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C score 61.50%2C E-value 1.9e-14;gbkey=misc_feature;gene=gtaB
NC_003888.3	RefSeq	ribosome_entry_site	3487545	3487548	.	+	.	ID=id4012;gbkey=RBS
NC_003888.3	RefSeq	gene	3487555	3488169	.	+	.	ID=gene3204;Dbxref=GeneID:1098617;Name=SCE87.34;gbkey=Gene;gene=SCE87.34;gene_biotype=protein_coding;gene_synonym=SCE87.34;locus_tag=SCO3183
NC_003888.3	RefSeq	CDS	3487555	3488169	.	+	0	ID=cds3141;Parent=gene3204;Dbxref=Genbank:NP_627398.1,GeneID:1098617;Name=NP_627398.1;Note=SCE87.34%2C unknown%2C len: 204 aa. Similar to many proteins of undefined function including: Escherichia coli SW:YGFA_ECOLI (EMBL:M12965) hypothetical 21.1 KD protein in SSR-SERA intergenic region (182 aa)%2C fasta scores opt: 298 z-score: 347.9 E(): 5.3e-12 35.0%25 identity in 180 aa overlap. Also weakly similar to several Eukaryotic proteins such as: Homo sapiens SW:FTHC_HUMAN (EMBL: L38928) 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) (202 aa)%2C fasta scores opt: 183 z-score: 217.8 E(): 9.3e-05 23.4%25 identity in 188 aa overlap. Contains a Pfam match to entry PF01812 5-FTHF_cyc-lig.;gbkey=CDS;gene=SCE87.34;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=NP_627398.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3487618	3488145	.	+	.	ID=id4013;Dbxref=GeneID:1098617;Note=Pfam match to entry PF01812 5-FTHF_cyc-lig%2C %2C score 108.30%2C E-value 1.5e-28;gbkey=misc_feature;gene=SCE87.34
NC_003888.3	RefSeq	stem_loop	3488189	3488238	.	+	.	ID=id4014;Note=possible stem loop with 100%25 matches over 24 bases and a loop of 2 bases.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3488258	3491068	.	-	.	ID=gene3205;Dbxref=GeneID:1098618;Name=SCE22.01c;gbkey=Gene;gene=SCE22.01c;gene_biotype=protein_coding;gene_synonym=SCE22.01c,SCE87.35c;locus_tag=SCO3184
NC_003888.3	RefSeq	CDS	3488258	3491068	.	-	0	ID=cds3142;Parent=gene3205;Dbxref=Genbank:NP_733595.1,GeneID:1098618;Name=NP_733595.1;Note=SCE22.01c%2C possible  penicillin acylase (fragment)%2C len: >162 aa%3B similar to C-terminal region of SW:PAC2_PSES3 (EMBL:M18278) Pseudomonas sp. penicillin acylase II precursor (EC 3.5.1.11) AcyII%2C 773 aa%3B fasta scores: opt: 291 z-score: 347.5 E(): 6.8e-12%3B 39.1%25 identity in 110 aa overlap. Contains possible N-terminal signal peptide sequence~SCE87.35c%2C possible penicillin acylase (EC 3.5.1.11) partial CDS%2C len: > 808 aa. Similar to many penicillin acylases including: Pseudomonas sp. (strain SE83) SW:PAC2_PSES3c (EMBL:M18278) penicillin acylase II precursor (EC 3.5.1.11) (penicillin amidase II) (773 aa)%2C fasta scores opt: 308 z-score: 319.7 E(): 2e-10 27.2%25 identity in 815 aa overlap. Contains a Pfam match to entry PF01804 Penicil_amidase and a 12x 'TG' repeat region between residues 148..172.;gbkey=CDS;gene=SCE22.01c;product=penicillin acylase;protein_id=NP_733595.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3488282	3490684	.	-	.	ID=id4015;Dbxref=GeneID:1098618;Note=Pfam match to entry PF01804 Penicil_amidase%2C %2C score 53.30%2C E-value 5.2e-12;gbkey=misc_feature;gene=SCE22.01c
NC_003888.3	RefSeq	repeat_region	3490170	3490241	.	-	.	ID=id4016;Dbxref=GeneID:1098618;Note=degenerate repeat region containing 6x CACGGG%2C 4x CACCGG%2C 1x TACCGG and 1x TACGGG.;gbkey=repeat_region;gene=SCE22.01c
NC_003888.3	RefSeq	gene	3491383	3492930	.	+	.	ID=gene3206;Dbxref=GeneID:1098619;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=cvrA,nhaP2,ycgO;locus_tag=SCO3185
NC_003888.3	RefSeq	CDS	3491383	3492930	.	+	0	ID=cds3143;Parent=gene3206;Dbxref=Genbank:NP_627399.1,GeneID:1098619;Name=NP_627399.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=potassium/proton antiporter;protein_id=NP_627399.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3491434	3492585	.	+	.	ID=id4017;Dbxref=GeneID:1098619;Note=Pfam match to entry PF00999 Na_H_Exchanger%2C Sodium/hydrogen exchanger family%2C score 73.90%2C E-value 3.4e-18;gbkey=misc_feature;gene=cvrA
NC_003888.3	RefSeq	gene	3493179	3494444	.	+	.	ID=gene3207;Dbxref=GeneID:1098620;Name=SCE22.03;gbkey=Gene;gene=SCE22.03;gene_biotype=protein_coding;gene_synonym=SCE22.03;locus_tag=SCO3186
NC_003888.3	RefSeq	CDS	3493179	3494444	.	+	0	ID=cds3144;Parent=gene3207;Dbxref=Genbank:NP_627400.1,GeneID:1098620;Name=NP_627400.1;Note=SCE22.03%2C possible ABC transporter integral membrane protein%2C len: 421 aa%3B similar to TR:O50532 (EMBL:AL009204) Streptomyces coelicolor hypothetical 41.1 kD protein SC9B10.25c%2C 393 aa%3B fasta scores: opt: 721 z-score: 787.1 E(): 0%3B 34.7%25 identity in 363 aa overlap. Contains match to Prosite entry PS00211 ABC transporters family signature and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE22.03;product=ABC transporter;protein_id=NP_627400.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3494238	3494282	.	+	.	ID=id4018;Dbxref=GeneID:1098620;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE22.03
NC_003888.3	RefSeq	ribosome_entry_site	3494501	3494506	.	+	.	ID=id4019;gbkey=RBS
NC_003888.3	RefSeq	gene	3494512	3494844	.	+	.	ID=gene3208;Dbxref=GeneID:1098621;Name=SCE22.04;gbkey=Gene;gene=SCE22.04;gene_biotype=protein_coding;gene_synonym=SCE22.04;locus_tag=SCO3187
NC_003888.3	RefSeq	CDS	3494512	3494844	.	+	0	ID=cds3145;Parent=gene3208;Dbxref=Genbank:NP_627401.1,GeneID:1098621;Name=NP_627401.1;Note=SCE22.04%2C hypothetical protein%2C len: 110 aa%3B similar to TR:O05574 (EMBL:Z94752) Mycobacterium tuberculosis hypothetical 11.4 kD protein MTCI237.05c%2C 110 aa%3B fasta scores: opt: 379 z-score: 372.3 E(): 2.8e-13%3B 52.3%25 identity in 107 aa overlap. High content in serine amino acid residue in C-terminal domain;gbkey=CDS;gene=SCE22.04;product=hypothetical protein;protein_id=NP_627401.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3494689	3494829	.	+	.	ID=id4020;Dbxref=GeneID:1098621;Note=serine amino acid residues rich region;gbkey=misc_feature;gene=SCE22.04
NC_003888.3	RefSeq	gene	3494975	3495817	.	+	.	ID=gene3209;Dbxref=GeneID:1098622;Name=SCE22.05;gbkey=Gene;gene=SCE22.05;gene_biotype=protein_coding;gene_synonym=SCE22.05;locus_tag=SCO3188
NC_003888.3	RefSeq	CDS	3494975	3495817	.	+	0	ID=cds3146;Parent=gene3209;Dbxref=Genbank:NP_627402.1,GeneID:1098622;Name=NP_627402.1;Note=Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate;gbkey=CDS;gene=SCE22.05;product=5'-methylthioadenosine phosphorylase;protein_id=NP_627402.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3494999	3495628	.	+	.	ID=id4021;Dbxref=GeneID:1098622;Note=Pfam match to entry PF00896 Mtap_PNP%2C phosphorylases family 2%2C score 301.80%2C E-value 8.1e-87;gbkey=repeat_region;gene=SCE22.05
NC_003888.3	RefSeq	gene	3496079	3496558	.	+	.	ID=gene3210;Dbxref=GeneID:1098623;Name=SCE22.06;gbkey=Gene;gene=SCE22.06;gene_biotype=protein_coding;gene_synonym=SCE22.06;locus_tag=SCO3189
NC_003888.3	RefSeq	CDS	3496079	3496558	.	+	0	ID=cds3147;Parent=gene3210;Dbxref=Genbank:NP_627403.1,GeneID:1098623;Name=NP_627403.1;Note=SCE22.06%2C possible membrane protein%2C len: 159 aa. Contains possible hydrophobic membrane spanning region and high content in alanine amino acid residues;gbkey=CDS;gene=SCE22.06;product=hypothetical protein;protein_id=NP_627403.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3496654	3496659	.	+	.	ID=id4022;gbkey=RBS
NC_003888.3	RefSeq	gene	3496670	3497140	.	+	.	ID=gene3211;Dbxref=GeneID:1098624;Name=SCE22.07;gbkey=Gene;gene=SCE22.07;gene_biotype=protein_coding;gene_synonym=SCE22.07;locus_tag=SCO3190
NC_003888.3	RefSeq	CDS	3496670	3497140	.	+	0	ID=cds3148;Parent=gene3211;Dbxref=Genbank:NP_627404.1,GeneID:1098624;Name=NP_627404.1;Note=SCE22.07%2C probable mechanosensitive channel%2C len: 156 aa%3B similar to TR:Q9Z5G4 (EMBL:AL035500) Mycobacterium leprae gated mechanosensitive ion channel MscL%2C 154 aa%3B fasta scores: opt: 248 z-score: 308.9 E(): 9.6e-10%3B 38.1%25 identity in 147 aa overlap and to SW:MSCL_CLOPE (EMBL:D50309) Clostridium perfringens large-conductance mechanosensitive channel MscL%2C 152 aa%3B fasta scores: opt: 216 z-score: 271.1 E(): 1.2e-07%3B 34.7%25 identity in 124 aa overlap. Contains Pfam match to entry PF01741 MscL%2C Large-conductance mechanosensitive channel%2C MscL and match to Prosite entry PS01327 Large-conductance mechanosensitive channels mscL family signature. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE22.07;product=mechanosensitive channel;protein_id=NP_627404.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3496694	3497116	.	+	.	ID=id4023;Dbxref=GeneID:1098624;Note=Pfam match to entry PF01741 MscL%2C Large-conductance mechanosensitive channel%2C MscL%2C score 101.30%2C E-value 1.9e-26;gbkey=misc_feature;gene=SCE22.07
NC_003888.3	RefSeq	sequence_feature	3496724	3496765	.	+	.	ID=id4024;Dbxref=GeneID:1098624;Note=PS01327 Large-conductance mechanosensitive channels mscL family signature;gbkey=misc_feature;gene=SCE22.07
NC_003888.3	RefSeq	gene	3497181	3497357	.	-	.	ID=gene3212;Dbxref=GeneID:1098625;Name=SCE22.08c;gbkey=Gene;gene=SCE22.08c;gene_biotype=protein_coding;gene_synonym=SCE22.08c;locus_tag=SCO3191
NC_003888.3	RefSeq	CDS	3497181	3497357	.	-	0	ID=cds3149;Parent=gene3212;Dbxref=Genbank:NP_627405.1,GeneID:1098625;Name=NP_627405.1;Note=SCE22.08c%2C unknown%2C len: 58 aa;gbkey=CDS;gene=SCE22.08c;product=hypothetical protein;protein_id=NP_627405.1;transl_table=11
NC_003888.3	RefSeq	gene	3497381	3498703	.	+	.	ID=gene3213;Dbxref=GeneID:1098626;Name=SCE22.09;gbkey=Gene;gene=SCE22.09;gene_biotype=protein_coding;gene_synonym=SCE22.09;locus_tag=SCO3192
NC_003888.3	RefSeq	CDS	3497381	3498703	.	+	0	ID=cds3150;Parent=gene3213;Dbxref=Genbank:NP_627406.1,GeneID:1098626;Name=NP_627406.1;Note=SCE22.09%2C possible integral membrane protein%2C len: 440 aa%3B similar to TR:AAF10839 (EMBL:AE001974) Deinococcus radiodurans conserved hypothetical protein DR1273%2C 429 aa%3B fasta scores: opt: 365 z-score: 385.0 E(): 5.5e-14%3B 28.6%25 identity in 413 aa overlap. High content in alanine amino acid residues. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE22.09;product=hypothetical protein;protein_id=NP_627406.1;transl_table=11
NC_003888.3	RefSeq	gene	3498864	3499910	.	+	.	ID=gene3214;Dbxref=GeneID:1098627;Name=SCE22.10;gbkey=Gene;gene=SCE22.10;gene_biotype=protein_coding;gene_synonym=SCE22.10;locus_tag=SCO3193
NC_003888.3	RefSeq	CDS	3498864	3499910	.	+	0	ID=cds3151;Parent=gene3214;Dbxref=Genbank:NP_627407.1,GeneID:1098627;Name=NP_627407.1;Note=SCE22.10%2C hypothetical protein%2C len: 348 aa%3B similar to SW:Y03I_MYCLE (EMBL:U00014) Mycobacterium leprae hypothetical 36.1 kD protein B1549_C2_208%2C 362 aa%3B fasta scores: opt: 894 z-score: 899.8 E(): 0%3B 48.2%25 identity in 365 aa overlap;gbkey=CDS;gene=SCE22.10;product=hypothetical protein;protein_id=NP_627407.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3500061	3500064	.	+	.	ID=id4025;gbkey=RBS
NC_003888.3	RefSeq	gene	3500071	3501294	.	+	.	ID=gene3215;Dbxref=GeneID:1098628;Name=SCE22.11;gbkey=Gene;gene=SCE22.11;gene_biotype=protein_coding;gene_synonym=SCE22.11;locus_tag=SCO3194
NC_003888.3	RefSeq	CDS	3500071	3501294	.	+	0	ID=cds3152;Parent=gene3215;Dbxref=Genbank:NP_627408.1,GeneID:1098628;Name=NP_627408.1;Note=SCE22.11%2C possible lipoprotein%2C len: 407 aa%3B similar to TR:CAB76012 (EMBL:AL157916) Streptomyces coelicolor lipoprotein SC3D11.15%2C 400 aa%3B fasta scores: opt: 1416 z-score: 1518.4 E(): 0%3B 52.4%25 identity in 403 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal domain signal peptide sequence;gbkey=CDS;gene=SCE22.11;product=lipoprotein;protein_id=NP_627408.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3500122	3500154	.	+	.	ID=id4026;Dbxref=GeneID:1098628;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE22.11
NC_003888.3	RefSeq	ribosome_entry_site	3501519	3501525	.	+	.	ID=id4027;gbkey=RBS
NC_003888.3	RefSeq	gene	3501532	3502212	.	+	.	ID=gene3216;Dbxref=GeneID:1098629;Name=SCE22.12;gbkey=Gene;gene=SCE22.12;gene_biotype=protein_coding;gene_synonym=SCE22.12;locus_tag=SCO3195
NC_003888.3	RefSeq	CDS	3501532	3502212	.	+	0	ID=cds3153;Parent=gene3216;Dbxref=Genbank:NP_627409.1,GeneID:1098629;Name=NP_627409.1;Note=SCE22.12%2C unknown%2C len: 226 aa;gbkey=CDS;gene=SCE22.12;product=hypothetical protein;protein_id=NP_627409.1;transl_table=11
NC_003888.3	RefSeq	gene	3502247	3504346	.	-	.	ID=gene3217;Dbxref=GeneID:1098630;Name=SCE22.13c;gbkey=Gene;gene=SCE22.13c;gene_biotype=protein_coding;gene_synonym=SCE22.13c;locus_tag=SCO3196
NC_003888.3	RefSeq	CDS	3502247	3504346	.	-	0	ID=cds3154;Parent=gene3217;Dbxref=Genbank:NP_627410.1,GeneID:1098630;Name=NP_627410.1;Note=SCE22.13c%2C probable fructose-specific permease%2C len: 699 aa%3B similar to SW:PTFB_ECOLI (EMBL:M23196) Escherichia coli PTS system%2C fructose-specific IIBC component (EIIBC-fru) FruA 563 aa%3B fasta scores: opt: 1006 z-score: 1038.9 E(): 0%3B 43.7%25 identity in 583 aa overlap. Contains match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and possible hydrophobic membrane spanning regions in C-terminal domain;gbkey=CDS;gene=SCE22.13c;product=fructose-specific permease;protein_id=NP_627410.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3504185	3504271	.	-	.	ID=id4028;Dbxref=GeneID:1098630;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCE22.13c
NC_003888.3	RefSeq	ribosome_entry_site	3504353	3504357	.	-	.	ID=id4029;gbkey=RBS
NC_003888.3	RefSeq	gene	3504474	3505421	.	-	.	ID=gene3218;Dbxref=GeneID:1098631;Name=SCE22.14c;gbkey=Gene;gene=SCE22.14c;gene_biotype=protein_coding;gene_synonym=SCE22.14c;locus_tag=SCO3197
NC_003888.3	RefSeq	CDS	3504474	3505421	.	-	0	ID=cds3155;Parent=gene3218;Dbxref=Genbank:NP_627411.1,GeneID:1098631;Name=NP_627411.1;Note=SCE22.14c%2C probable 1-phosphofructokinase%2C len: 315 aa%3B similar to SW:K1PF_RHOCA (EMBL:X53150) Rhodobacter capsulatus 1-phosphofructokinase (EC 2.7.1.56) (fructose 1-phosphate kinase) FruK%2C 316 aa%3B fasta scores: opt: 555 z-score: 576.5 E(): 1.2e-24%3B 37.8%25 identity in 315 aa overlap. Contains Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase and match to Prosite entry PS00583 pfkB family of carbohydrate kinases signature 1;gbkey=CDS;gene=SCE22.14c;product=1-phosphofructokinase;protein_id=NP_627411.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3504651	3505316	.	-	.	ID=id4030;Dbxref=GeneID:1098631;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 89.40%2C E-value 4e-27;gbkey=misc_feature;gene=SCE22.14c
NC_003888.3	RefSeq	sequence_feature	3505242	3505316	.	-	.	ID=id4031;Dbxref=GeneID:1098631;Note=PS00583 pfkB family of carbohydrate kinases signature 1;gbkey=misc_feature;gene=SCE22.14c
NC_003888.3	RefSeq	gene	3505418	3506179	.	-	.	ID=gene3219;Dbxref=GeneID:1098632;Name=SCE22.15c;gbkey=Gene;gene=SCE22.15c;gene_biotype=protein_coding;gene_synonym=SCE22.15c;locus_tag=SCO3198
NC_003888.3	RefSeq	CDS	3505418	3506179	.	-	0	ID=cds3156;Parent=gene3219;Dbxref=Genbank:NP_627412.1,GeneID:1098632;Name=NP_627412.1;Note=SCE22.15c%2C probable deoR-family transcriptional regulator%2C len: 253 aa%3B similar to TR:Q9X9X5 (EMBL:AL096743) Streptomyces coelicolor transcriptional regulator SCI7.15%2C 258 aa%3B fasta scores: opt: 609 z-score: 704.8 E(): 8.5e-32%3B 43.1%25 identity in 248 aa overlap and to SW:GATR_ECOLI (EMBL:AE000298) Escherichia coli galactitol utilization operon repressor GatR%2C 259 aa%3B fasta scores: opt: 438 z-score: 509.7 E(): 6.3e-21%3B 33.6%25 identity in 256 aa overlap. Contains Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family;gbkey=CDS;gene=SCE22.15c;product=DeoR family transcriptional regulator;protein_id=NP_627412.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3505484	3506164	.	-	.	ID=id4032;Dbxref=GeneID:1098632;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 211.50%2C E-value 1.2e-59;gbkey=misc_feature;gene=SCE22.15c
NC_003888.3	RefSeq	gene	3506390	3507907	.	-	.	ID=gene3220;Dbxref=GeneID:1098633;Name=SCE22.16c;gbkey=Gene;gene=SCE22.16c;gene_biotype=protein_coding;gene_synonym=SCE22.16c;locus_tag=SCO3199
NC_003888.3	RefSeq	CDS	3506390	3507907	.	-	0	ID=cds3157;Parent=gene3220;Dbxref=Genbank:NP_627413.1,GeneID:1098633;Name=NP_627413.1;Note=SCE22.16c%2C probable transmembrane efflux protein%2C len: 505 aa%3B similar to SW:AC22_STRCO (EMBL:M64683) Streptomyces coelicolor probable actinorhodin transporter ActII-2%2C 578 aa%3B fasta scores: opt: 1347 z-score: 1470.8 E(): 0%3B 45.9%25 identity in 442 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE22.16c;product=transmembrane efflux protein;protein_id=NP_627413.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3506432	3507841	.	-	.	ID=id4033;Dbxref=GeneID:1098633;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -100.00%2C E-value 0.0027;gbkey=misc_feature;gene=SCE22.16c
NC_003888.3	RefSeq	gene	3507970	3508941	.	+	.	ID=gene3221;Dbxref=GeneID:1098634;Name=SCE22.17;gbkey=Gene;gene=SCE22.17;gene_biotype=protein_coding;gene_synonym=SCE22.17;locus_tag=SCO3200
NC_003888.3	RefSeq	CDS	3507970	3508941	.	+	0	ID=cds3158;Parent=gene3221;Dbxref=Genbank:NP_627414.1,GeneID:1098634;Name=NP_627414.1;Note=SCE22.17%2C probable deoR-family transcriptional regulator%2C len: 330 aa%3B similar to TR:CAB81864 (EMBL:AL161691) Streptomyces coelicolor deoR-family transcriptional regulator SCD40A.19c%2C 339 aa%3B fasta scores: opt: 682 z-score: 765.6 E(): 0%3B 43.3%25 identity in 298 aa overlap and to Streptomyces coelicolor SC8G12.03c%2C 343 aa%3B fasta scores: opt: 761 z-score: 720.8 E(): 1.3e-34%3B 45.1%25 identity in 326 aa overlap. Contains match to Prosite entry PS00894 Bacterial regulatory proteins%2C deoR family signature and possible helix-turn-helix motif at residues 22..43 (+5.48 SD);gbkey=CDS;gene=SCE22.17;product=DeoR family transcriptional regulator;protein_id=NP_627414.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3507991	3508095	.	+	.	ID=id4034;Dbxref=GeneID:1098634;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature;gbkey=misc_feature;gene=SCE22.17
NC_003888.3	RefSeq	gene	3509244	3509954	.	-	.	ID=gene3222;Dbxref=GeneID:1098635;Name=SCE22.18c;gbkey=Gene;gene=SCE22.18c;gene_biotype=protein_coding;gene_synonym=SCE22.18c;locus_tag=SCO3201
NC_003888.3	RefSeq	CDS	3509244	3509954	.	-	0	ID=cds3159;Parent=gene3222;Dbxref=Genbank:NP_627415.1,GeneID:1098635;Name=NP_627415.1;Note=SCE22.18c%2C probable tetR-family transcriptional regulator%2C len: 236 aa%3B similar to TR:CAB62751 (EMBL:AL133424) Streptomyces coelicolor tetR-family transcriptional regulator SCF56.06%2C 213 aa%3B fasta scores: opt: 311 z-score: 346.2 E(): 8e-12%3B 38.1%25 identity in 194 aa overlap and to SW:TCMR_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C transcriptional repressor TcmR%2C 226 aa%3B fasta scores: opt: 254 z-score: 284.8 E(): 2.1e-08%3B 32.2%25 identity in 214 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 53..74 (+5.22 SD);gbkey=CDS;gene=SCE22.18c;product=TetR family transcriptional regulator;protein_id=NP_627415.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3509721	3509846	.	-	.	ID=id4035;Dbxref=GeneID:1098635;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 38.40%2C E-value 6.4e-09;gbkey=misc_feature;gene=SCE22.18c
NC_003888.3	RefSeq	sequence_feature	3510072	3511463	.	-	.	ID=id4036;Note=previously sequenced fragment EBML:X52982 Streptomyces coelicolor hrdD gene for principal sigma factor;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3510381	3511379	.	-	.	ID=gene3223;Dbxref=GeneID:1098636;Name=hrdD;gbkey=Gene;gene=hrdD;gene_biotype=protein_coding;gene_synonym=hrdD,SCE22.19c;locus_tag=SCO3202
NC_003888.3	RefSeq	CDS	3510381	3511379	.	-	0	ID=cds3160;Parent=gene3223;Dbxref=Genbank:NP_627416.1,GeneID:1098636;Name=NP_627416.1;Note=SCE22.19c%2C hrdD%2C RNA polymerase principal sigma factor%2C len: 332 aa%3B identical to previously sequenced SW:HRDD_STRCO (EMBL:X52982) Streptomyces coelicolor RNA polymerase principal sigma factor HrdD%2C 332 aa. Contains Pfam match to entry PF00140 sigma70%2C Sigma-70 factor and matches to Prosite entries PS00715 Sigma-70 factors family signature 1 and PS00716 Sigma-70 factors family signature 2. Contains also possible helix-turn-helix motif at residues 292..313 (+5.89 SD);gbkey=CDS;gene=hrdD;product=RNA polymerase principal sigma factor;protein_id=NP_627416.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3510417	3511100	.	-	.	ID=id4037;Dbxref=GeneID:1098636;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 421.20%2C E-value 9.8e-123;gbkey=misc_feature;gene=hrdD
NC_003888.3	RefSeq	sequence_feature	3510423	3510503	.	-	.	ID=id4038;Dbxref=GeneID:1098636;Note=PS00716 Sigma-70 factors family signature 2;gbkey=misc_feature;gene=hrdD
NC_003888.3	RefSeq	sequence_feature	3510969	3511010	.	-	.	ID=id4039;Dbxref=GeneID:1098636;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=hrdD
NC_003888.3	RefSeq	ribosome_entry_site	3511385	3511388	.	-	.	ID=id4040;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	3511429	3512218	.	+	.	ID=id4041;Note=previously sequenced fragment EMBL:M62753 S.coelicolor bar gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	3511583	3511587	.	+	.	ID=id4042;gbkey=RBS
NC_003888.3	RefSeq	gene	3511595	3512110	.	+	.	ID=gene3224;Dbxref=GeneID:1098637;Name=bar;gbkey=Gene;gene=bar;gene_biotype=protein_coding;gene_synonym=bar,SCE22.20;locus_tag=SCO3203
NC_003888.3	RefSeq	CDS	3511595	3512110	.	+	0	ID=cds3161;Parent=gene3224;Dbxref=Genbank:NP_627417.1,GeneID:1098637;Name=NP_627417.1;Note=SCE22.20%2C bar%2C phosphinothricin acetyltransferase%2C len: 171 aa%3B identical to previously sequenced SW:BAR_STRCO (EMBL:M62753) Streptomyces coelicolor phosphinothricin acetyltransferase (EC 2.3.1.-) Bar%2C 171 aa. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=bar;product=phosphinothricin acetyltransferase;protein_id=NP_627417.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3511619	3512032	.	+	.	ID=id4043;Dbxref=GeneID:1098637;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 44.00%2C E-value 3.5e-09;gbkey=misc_feature;gene=bar
NC_003888.3	RefSeq	gene	3512143	3512904	.	-	.	ID=gene3225;Dbxref=GeneID:1098638;Name=SCE22.21c;gbkey=Gene;gene=SCE22.21c;gene_biotype=protein_coding;gene_synonym=SCE22.21c;locus_tag=SCO3204
NC_003888.3	RefSeq	CDS	3512143	3512904	.	-	0	ID=cds3162;Parent=gene3225;Dbxref=Genbank:NP_627418.1,GeneID:1098638;Name=NP_627418.1;Note=SCE22.21c%2C unknown%2C len: 253 aa%3B identical to previously sequenced TR:Q54224 (EMBL:X79980) Streptomyces griseus unknown gene%2C 253 aa and similar to SW:YGID_ECOLI (EMBL:M77129) Escherichia coli hypothetical 29.9 kD protein in TolC-RibB intergenic region (ORFC) YgiD%2C 271 aa%3B fasta scores: opt: 566 z-score: 655.8 E(): 4.6e-29%3B 38.5%25 identity in 262 aa overlap;gbkey=CDS;gene=SCE22.21c;product=hypothetical protein;protein_id=NP_627418.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3512908	3512911	.	-	.	ID=id4044;gbkey=RBS
NC_003888.3	RefSeq	gene	3513024	3513515	.	+	.	ID=gene3226;Dbxref=GeneID:1098639;Name=SCE22.22;gbkey=Gene;gene=SCE22.22;gene_biotype=protein_coding;gene_synonym=SCE22.22;locus_tag=SCO3205
NC_003888.3	RefSeq	CDS	3513024	3513515	.	+	0	ID=cds3163;Parent=gene3226;Dbxref=Genbank:NP_627419.1,GeneID:1098639;Name=NP_627419.1;Note=SCE22.22%2C probable MarR-family transcriptional repressor%2C len: 163 aa%3B similar to TR:Q9X5U1 (EMBL:AF127374) Streptomyces lavendula repressor MmcW%2C 163 aa%3B fasta scores: opt: 724 z-score: 892.8 E(): 0%3B 65.4%25 identity in 162 aa overlap and to TR:CAB70635 (EMBL:AL137242) Streptomyces coelicolor transcriptional regulator SC8F4.09c%2C 158 aa%3B fasta scores: opt: 409 z-score: 459.2 E(): 4.8e-20%3B 43.2%25 identity in 146 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SCE22.22;product=MarR family transcriptional regulator;protein_id=NP_627419.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3513141	3513461	.	+	.	ID=id4045;Dbxref=GeneID:1098639;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 71.20%2C E-value 2.2e-17;gbkey=misc_feature;gene=SCE22.22
NC_003888.3	RefSeq	gene	3513616	3515160	.	-	.	ID=gene3227;Dbxref=GeneID:1098640;Name=SCE22.23c;gbkey=Gene;gene=SCE22.23c;gene_biotype=protein_coding;gene_synonym=SCE22.23c;locus_tag=SCO3206
NC_003888.3	RefSeq	CDS	3513616	3515160	.	-	0	ID=cds3164;Parent=gene3227;Dbxref=Genbank:NP_627420.1,GeneID:1098640;Name=NP_627420.1;Note=SCE22.23c%2C probable transmembrane efflux protein%2C len: 514 aa%3B similar to SW:PUR8_STRLP (EMBL:X76855) Streptomyces lipmanii puromycin resistance protein Pur8%2C 503 aa%3B fasta scores: opt: 1634 z-score: 1768.4 E(): 0%3B 53.1%25 identity in 493 aa overlap and to many other efflux proteins%2C e.g. TR:CAA18346 (EMBL:AL022268) Streptomyces coelicolor transmembrane efflux protein SC4H2.31c%2C 515 aa%3B fasta scores: opt: 1237 z-score: 1139.7 E(): 0%3B 41.0%25 identity in 493 aa overlap. Contains match to Prosite entry PS00216 Sugar transport proteins signature 1 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE22.23c;product=transmembrane efflux protein;protein_id=NP_627420.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3514885	3514935	.	-	.	ID=id4046;Dbxref=GeneID:1098640;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCE22.23c
NC_003888.3	RefSeq	gene	3515302	3516036	.	-	.	ID=gene3228;Dbxref=GeneID:1098641;Name=SCE22.24c;gbkey=Gene;gene=SCE22.24c;gene_biotype=protein_coding;gene_synonym=SCE22.24c;locus_tag=SCO3207
NC_003888.3	RefSeq	CDS	3515302	3516036	.	-	0	ID=cds3165;Parent=gene3228;Dbxref=Genbank:NP_627421.1,GeneID:1098641;Name=NP_627421.1;Note=SCE22.24c%2C probable tetR-family transcriptional regulator (fragment)%2C len: >244 aa%3B similar to TR:Q9WX19 (EMBL:AL079345) Streptomyces coelicolor transcriptional regulator SCE68.13%2C 230 aa%3B fasta scores: opt: 305 z-score: 361.2 E(): 1.2e-12%3B 35.2%25 identity in 210 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Contains also possible helix-turn-helix motif at residues 67..88 (+4.22 SD);end_range=3516036,.;gbkey=CDS;gene=SCE22.24c;partial=true;product=TetR family transcriptional regulator;protein_id=NP_627421.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3515746	3515883	.	-	.	ID=id4047;Dbxref=GeneID:1098641;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 20.80%2C E-value 0.0005;gbkey=misc_feature;gene=SCE22.24c
NC_003888.3	RefSeq	gene	3516275	3517573	.	+	.	ID=gene3229;Dbxref=GeneID:1098642;Name=SCE8.01;gbkey=Gene;gene=SCE8.01;gene_biotype=protein_coding;gene_synonym=SCE8.01;locus_tag=SCO3208
NC_003888.3	RefSeq	CDS	3516275	3517573	.	+	0	ID=cds3166;Parent=gene3229;Dbxref=Genbank:NP_627422.1,GeneID:1098642;Name=NP_627422.1;Note=SCE8.01%2C possible hypothetical protein%2C len: 432 aa%3B similar to TR:CAC44281 (EMBL:AL596030) Streptomyces coelicolor hypothetical protein SCBAC17F8.09%2C 436 aa%3B fasta scores: opt: 555 Z-score: 578.7 E(): 1.3e-24%3B 33.991%25 identity in 456 aa overlap. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SCE8.01;product=hypothetical protein;protein_id=NP_627422.1;transl_table=11
NC_003888.3	RefSeq	gene	3517633	3519207	.	+	.	ID=gene3230;Dbxref=GeneID:1098643;Name=SCE8.02;gbkey=Gene;gene=SCE8.02;gene_biotype=protein_coding;gene_synonym=SCE8.02;locus_tag=SCO3209
NC_003888.3	RefSeq	CDS	3517633	3519207	.	+	0	ID=cds3167;Parent=gene3230;Dbxref=Genbank:NP_627423.1,GeneID:1098643;Name=NP_627423.1;Note=SCE8.02%2C possible transcriptional regulator%2C len: 524 aa%3B N-terminal (up to approx. 270aa) similar to one group of transcriptional regulator (eg. SW:ICLR_ECOLI acetate operon repressor from Escherichia coli (274 aa) fasta scores%3B opt: 208%2C z-score: 221.4%2C E(): 5e-05%2C (27.1%25 identity in 262 aa overlap)) and C-terminal (from approx. 270aa) similar to a different group of transcriptional regulator (eg. SW:MHPR_ECOLI mhp operon transcriptional activator (315 aa) fasta scores%3B opt: 205%2C z-score: 217.5%2C E(): 8.3e-05%2C (28.5%25 identity in 267 aa overlap). Both halves appear to be members of the same family of transcriptional regulators (IclR-type) suggesting a duplication event. Contains two probable helix-turn-helix motifs at 37-58aa (Score 1082 (+2.87 SD)) and 320-341aa (Score 1437 (+4.08 SD)).;gbkey=CDS;gene=SCE8.02;product=transcriptional regulator;protein_id=NP_627423.1;transl_table=11
NC_003888.3	RefSeq	gene	3519449	3520903	.	-	.	ID=gene3231;Dbxref=GeneID:1098644;Name=SCE8.03c;gbkey=Gene;gene=SCE8.03c;gene_biotype=protein_coding;gene_synonym=SCE8.03c;locus_tag=SCO3210
NC_003888.3	RefSeq	CDS	3519449	3520903	.	-	0	ID=cds3168;Parent=gene3231;Dbxref=Genbank:NP_627424.1,GeneID:1098644;Name=NP_627424.1;Note=SCE8.03c%2C aro%2C probable 2-dehydro-3-deoxyheptonate aldolase%2C len: 484 aa%3B similar to many e.g. TR:O52308 (EMBL:AF035756) 2-dehydro-3-deoxyheptonate aldolase from Streptomyces sp. fasta scores%3B opt: 1619%2C z-score: 1722.0%2C E(): 0%2C (54.5%25 identity in 440 aa overlap) and SW:AROF_ARATH phospho-2-dehydro-3-deoxyheptonate aldolase 1 from Arabidopsis thaliana (525 aa) fasta scores%3B opt: 1457%2C z-score: 1549.2%2C E(): 0%2C (48.4%25 identity in 457 aa overlap).;gbkey=CDS;gene=SCE8.03c;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=NP_627424.1;transl_table=11
NC_003888.3	RefSeq	gene	3520900	3521676	.	-	.	ID=gene3232;Dbxref=GeneID:1098645;Name=SCE8.04c;gbkey=Gene;gene=SCE8.04c;gene_biotype=protein_coding;gene_synonym=SCE8.04c,trpC2;locus_tag=SCO3211
NC_003888.3	RefSeq	CDS	3520900	3521676	.	-	0	ID=cds3169;Parent=gene3232;Dbxref=Genbank:NP_627425.1,GeneID:1098645;Name=NP_627425.1;Note=SCE8.04c%2C trpC2%2C probable indoleglycerol phosphate synthase%2C len: 258aa%3B similar to many inluding another from Streptomyces coelicolor TR:O68814 (EMBL:AF054585) located in the trpCBA locus which maps (by hybridisation) to the overlap between cosmids 3A3 and 4G6 (269 aa) fasta scores%3B opt: 652%2C z-score: 740.9%2C E(): 0%2C (47.2%25 identity in 254 aa overlap). Also similar to SW:TRPC_PSEAE trpC%2C probable indoleglycerol phosphate synthase from Pseudomonas aeruginosa (278 aa) fasta scores%3B opt: 632%2C z-score: 718.3%2C E(): 1.1e-32%2C (43.5%25 identity in 260 aa overlap). Contains Pfam match to entry PF00218 IGPS%2C Indole-3-glycerol phosphate synthases%2C score 316.20%2C E-value 3.8e-91.;gbkey=CDS;gene=SCE8.04c;product=indoleglycerol phosphate synthase;protein_id=NP_627425.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3520909	3521574	.	-	.	ID=id4048;Dbxref=GeneID:1098645;Note=Pfam match to entry PF00218 IGPS%2C Indole-3-glycerol phosphate synthases%2C score 316.20%2C E-value 3.8e-91.;gbkey=misc_feature;gene=SCE8.04c
NC_003888.3	RefSeq	gene	3521673	3522680	.	-	.	ID=gene3233;Dbxref=GeneID:1098646;Name=SCE8.05c;gbkey=Gene;gene=SCE8.05c;gene_biotype=protein_coding;gene_synonym=SCE8.05c,trpD2;locus_tag=SCO3212
NC_003888.3	RefSeq	CDS	3521673	3522680	.	-	0	ID=cds3170;Parent=gene3233;Dbxref=Genbank:NP_627426.1,GeneID:1098646;Name=NP_627426.1;Note=SCE8.05c%2C trpD2%2C anthranilate phosphoribotransferase%2C len: 335 aa%3B similar to many e.g. SW:TRPD_AZOBR TrpD%2C anthranilate phosphoribotransferase from Azospirillum brasilense (355 aa) fasta scores%3B opt: 924%2C z-score: 1056.6%2C E(): 0%2C (49.5%25 identity in 315 aa overlap). Contains Pfam match to entry PF00591 Glycos_transf_3%2C glycosyl transferase family%2C score 223.70%2C E-value 2.8e-63.;gbkey=CDS;gene=SCE8.05c;product=anthranilate phosphoribotransferase;protein_id=NP_627426.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3522252	3522677	.	-	.	ID=id4049;Dbxref=GeneID:1098646;Note=Pfam match to entry PF00591 Glycos_transf_3%2C glycosyl transferase family%2C score 223.70%2C E-value 2.8e-63.;gbkey=misc_feature;gene=SCE8.05c
NC_003888.3	RefSeq	gene	3522697	3523299	.	-	.	ID=gene3234;Dbxref=GeneID:1098647;Name=SCE8.06c;gbkey=Gene;gene=SCE8.06c;gene_biotype=protein_coding;gene_synonym=SCE8.06c,trpG;locus_tag=SCO3213
NC_003888.3	RefSeq	CDS	3522697	3523299	.	-	0	ID=cds3171;Parent=gene3234;Dbxref=Genbank:NP_627427.1,GeneID:1098647;Name=NP_627427.1;Note=SCE8.06c%2C trpG%2C anthranilate synthase component II%2C len: 200aa%3B similar to many eg. TR:G4185545 (EMBL:AF108766) TrpG%2C anthranilate synthase component II%2C from Rhodobacter sphaeroides (195 aa) fasta scores%3B opt: 728%2C z-score: 825.0%2C E(): 0%2C (60.2%25 identity in 186 aa overlap). Contains matches to Pfam entry PF00117 GATase%2C Glutamine amidotransferases class-I%2C score 332.60%2C E-value 4.3e-96 and Prosite PS00442 Glutamine amidotransferases class-I active site.;gbkey=CDS;gene=SCE8.06c;product=anthranilate synthase component II;protein_id=NP_627427.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3522709	3523260	.	-	.	ID=id4050;Dbxref=GeneID:1098647;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferases class-I%2C score 332.60%2C E-value 4.3e-96;gbkey=misc_feature;gene=SCE8.06c
NC_003888.3	RefSeq	sequence_feature	3523012	3523047	.	-	.	ID=id4051;Dbxref=GeneID:1098647;Note=PS00442 Glutamine amidotransferases class-I active site.;gbkey=misc_feature;gene=SCE8.06c
NC_003888.3	RefSeq	gene	3523296	3524831	.	-	.	ID=gene3235;Dbxref=GeneID:1098648;Name=SCE8.07c;gbkey=Gene;gene=SCE8.07c;gene_biotype=protein_coding;gene_synonym=SCE8.07c,trpE2;locus_tag=SCO3214
NC_003888.3	RefSeq	CDS	3523296	3524831	.	-	0	ID=cds3172;Parent=gene3235;Dbxref=Genbank:NP_627428.1,GeneID:1098648;Name=NP_627428.1;Note=SCE8.07c%2C trpE2%2C anthranilate synthase component I%2C len: 511aa%3B similar to many eg. SW:TRPE_PSEPU TrpE%2C anthranilate synthase component I from Pseudomonas putida (493 aa) fasta scores%3B opt: 1173%2C z-score: 1253.8%2C E(): 0%2C (44.3%25 identity in 492 aa overlap). Contains Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme%2C score 529.40%2C E-value 2.5e-155.;gbkey=CDS;gene=SCE8.07c;product=anthranilate synthase component I;protein_id=NP_627428.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3523320	3524111	.	-	.	ID=id4052;Dbxref=GeneID:1098648;Note=Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme%2C score 529.40%2C E-value 2.5e-155;gbkey=misc_feature;gene=SCE8.07c
NC_003888.3	RefSeq	gene	3524828	3525844	.	-	.	ID=gene3236;Dbxref=GeneID:1098649;Name=SCE8.08c;gbkey=Gene;gene=SCE8.08c;gene_biotype=protein_coding;gene_synonym=SCE8.08c;locus_tag=SCO3215
NC_003888.3	RefSeq	CDS	3524828	3525844	.	-	0	ID=cds3173;Parent=gene3236;Dbxref=Genbank:NP_627429.1,GeneID:1098649;Name=NP_627429.1;Note=SCE8.08c%2C unknown%2C len: 338 aa;gbkey=CDS;gene=SCE8.08c;product=hypothetical protein;protein_id=NP_627429.1;transl_table=11
NC_003888.3	RefSeq	gene	3526137	3528527	.	+	.	ID=gene3237;Dbxref=GeneID:1098650;Name=SCE8.09;gbkey=Gene;gene=SCE8.09;gene_biotype=protein_coding;gene_synonym=SCE8.09;locus_tag=SCO3216
NC_003888.3	RefSeq	CDS	3526137	3528527	.	+	0	ID=cds3174;Parent=gene3237;Dbxref=Genbank:NP_627430.1,GeneID:1098650;Name=NP_627430.1;Note=SCE8.09%2C probable integral membrane ATPase%2C len: 796 aa%3B member of a large family including SW:Y1B2_MYCTU cation-transporting ATPase from Mycobacterium tuberculosis (797 aa) fasta scores%3B opt: 2741%2C z-score: 2896.9%2C E(): 0%2C (56.8%25 identity in 791 aa overlap). Contains two Pfam matches to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPases%2C score 109.40%2C E-value 9.7e-30 and score 155.80%2C E-value 7.3e-43%2C and Prosite match to PS00154 E1-E2 ATPases phosphorylation site.;gbkey=CDS;gene=SCE8.09;product=integral membrane ATPase;protein_id=NP_627430.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3526365	3527120	.	+	.	ID=id4053;Dbxref=GeneID:1098650;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPases%2C score 155.80%2C E-value 7.3e-43;gbkey=misc_feature;gene=SCE8.09
NC_003888.3	RefSeq	sequence_feature	3527064	3527084	.	+	.	ID=id4054;Dbxref=GeneID:1098650;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;gene=SCE8.09
NC_003888.3	RefSeq	sequence_feature	3527511	3528119	.	+	.	ID=id4055;Dbxref=GeneID:1098650;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPases%2C score 109.40%2C E-value 9.7e-30;gbkey=misc_feature;gene=SCE8.09
NC_003888.3	RefSeq	gene	3529272	3531188	.	+	.	ID=gene3238;Dbxref=GeneID:1098651;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;gene_synonym=cdaR,SCE8.10;locus_tag=SCO3217
NC_003888.3	RefSeq	CDS	3529272	3531188	.	+	0	ID=cds3175;Parent=gene3238;Dbxref=Genbank:NP_627431.1,GeneID:1098651;Name=NP_627431.1;Note=SCE8.10%2C cdaR%2C transcriptional activator protein%2C len: 638 aa%3B Previously sequenced and therefore identical to CdaR (EM:AF124138) transcriptional activator protein for the CDA biosynthesis cluster in Streptomyces coelicolor. Also similar to many including SW:AFSR_STRCO AfsR%2C a global regulatory protein for secondary metabolite formation in Streptomyces coelicolor A3(2) (993 aa) fasta scores%3B opt: 972%2C z-score: 1087.1%2C E(): 0%2C (36.6%25 identity in 610 aa overlap) and SW:REDD_STRCO regulator of undecylprodigiosin production in Streptomyces coelicolor A3(2) (350 aa) fasta scores%3B opt: 382%2C z-score: 432.2%2C E(): 9.1e-17%2C (32.6%25 identity in 258 aa overlap). Contains match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=cdaR;product=transcriptional regulator;protein_id=NP_627431.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3530271	3530294	.	+	.	ID=id4056;Dbxref=GeneID:1098651;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cdaR
NC_003888.3	RefSeq	gene	3531250	3531465	.	-	.	ID=gene3239;Dbxref=GeneID:1098652;Name=SCE8.11c;gbkey=Gene;gene=SCE8.11c;gene_biotype=protein_coding;gene_synonym=SCE8.11c;locus_tag=SCO3218
NC_003888.3	RefSeq	CDS	3531250	3531465	.	-	0	ID=cds3176;Parent=gene3239;Dbxref=Genbank:NP_627432.1,GeneID:1098652;Name=NP_627432.1;Note=SCE8.11c%2C small conserved hypothetical protein%2C len: 71aa%3B similar to others located within antibiotic synthesis clusters egs. TR:O52824 (EMBL:AJ223999) hypothetical protein located within the vancomycin biosynthesis cluster in Amycolatopsis orientalis (56 aa) fasta scores%3B opt: 281%2C z-score: 402.6%2C E(): 4e-15%2C (67.3%25 identity in 52 aa overlap) and SW:YBDZ_ECOLI hypothetical protein located within the enterobactin region of Escherichia coli (72 aa) fasta scores%3B opt: 186%2C z-score: 272.4%2C E(): 7.3e-08%2C (32.8%25 identity in 64 aa overlap).;gbkey=CDS;gene=SCE8.11c;product=hypothetical protein;protein_id=NP_627432.1;transl_table=11
NC_003888.3	RefSeq	gene	3531588	3532763	.	-	.	ID=gene3240;Dbxref=GeneID:1098653;Name=SCE8.12c;gbkey=Gene;gene=SCE8.12c;gene_biotype=protein_coding;gene_synonym=SCE8.12c;locus_tag=SCO3219
NC_003888.3	RefSeq	CDS	3531588	3532763	.	-	0	ID=cds3177;Parent=gene3240;Dbxref=Genbank:NP_627433.1,GeneID:1098653;Name=NP_627433.1;Note=SCE8.12c%2C possible lipase (hypothetical protein)%2C len: 391 aa%3B weak similarity to many eukaryotic lipases e.g. SW:PAFA_CAVPO platelet-activating factor-acetylhydrolase from guinea pig (Cavia porcellus) (436 aa) fasta scores%3B opt: 153%2C z-score: 161.7%2C E(): 0.11%2C (22.9%25 identity in 319 aa overlap). Contains PS00120 Lipases%2C serine active site. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE8.12c;product=lipase;protein_id=NP_627433.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3532005	3532034	.	-	.	ID=id4057;Dbxref=GeneID:1098653;Note=PS00120 Lipases%2C serine active site.;gbkey=misc_feature;gene=SCE8.12c
NC_003888.3	RefSeq	gene	3532971	3533399	.	-	.	ID=gene3241;Dbxref=GeneID:1098654;Name=SCE8.13c;gbkey=Gene;gene=SCE8.13c;gene_biotype=protein_coding;gene_synonym=SCE8.13c;locus_tag=SCO3220
NC_003888.3	RefSeq	CDS	3532971	3533399	.	-	0	ID=cds3178;Parent=gene3241;Dbxref=Genbank:NP_627434.1,GeneID:1098654;Name=NP_627434.1;Note=SCE8.13c%2C hypothetical protein%2C len: 142 aa%3B contains alanine-rich N-terminal region and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE8.13c;product=hypothetical protein;protein_id=NP_627434.1;transl_table=11
NC_003888.3	RefSeq	gene	3533492	3534346	.	-	.	ID=gene3242;Dbxref=GeneID:1098655;Name=SCE8.14c;gbkey=Gene;gene=SCE8.14c;gene_biotype=protein_coding;gene_synonym=SCE8.14c;locus_tag=SCO3221
NC_003888.3	RefSeq	CDS	3533492	3534346	.	-	0	ID=cds3179;Parent=gene3242;Dbxref=Genbank:NP_627435.1,GeneID:1098655;Name=NP_627435.1;Note=catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate;gbkey=CDS;gene=SCE8.14c;product=prephenate dehydrogenase;protein_id=NP_627435.1;transl_table=11
NC_003888.3	RefSeq	gene	3534444	3534899	.	-	.	ID=gene3243;Dbxref=GeneID:1098656;Name=SCE8.15c;gbkey=Gene;gene=SCE8.15c;gene_biotype=protein_coding;gene_synonym=SCE8.15c;locus_tag=SCO3222
NC_003888.3	RefSeq	CDS	3534444	3534899	.	-	0	ID=cds3180;Parent=gene3243;Dbxref=Genbank:NP_627436.1,GeneID:1098656;Name=NP_627436.1;Note=SCE8.15c%2C possible small hypothetical protein%2C len: 169 aa%3B similar to TR:Q9K3L2 (EMBL:AL360055) Streptomyces coelicolor  hypothetical protein SCG20A.28c%2C 150 aa%3B fasta scores: opt: 727 Z-score: 859.9 E(): 2.9e-40%3B 72.109%25 identity in 147 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SCE8.15c;product=hypothetical protein;protein_id=NP_627436.1;transl_table=11
NC_003888.3	RefSeq	gene	3535054	3535848	.	-	.	ID=gene3244;Dbxref=GeneID:1098657;Name=SCE8.16c;gbkey=Gene;gene=SCE8.16c;gene_biotype=protein_coding;gene_synonym=SCE8.16c;locus_tag=SCO3223
NC_003888.3	RefSeq	CDS	3535054	3535848	.	-	0	ID=cds3181;Parent=gene3244;Dbxref=Genbank:NP_627437.1,GeneID:1098657;Name=NP_627437.1;Note=SCE8.16c%2C probable ABC transporter integral membrane protein%2C len: 266aa%3B located directly downstream of a probable ABC transporter ATP-binding protein (6bp gap). Similar to many particularly TR:O86630 (EMBL:AL031155) an integral membrane protein located directly downstream of a probable ABC transporter ATP-binding protein (2bp gap) from Streptomyces coelicolor (279 aa) fasta scores%3B opt: 460%2C z-score: 539.7%2C E(): 9.4e-23%2C (37.0%25 identity in 273 aa overlap). Contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE8.16c;product=ABC transporter;protein_id=NP_627437.1;transl_table=11
NC_003888.3	RefSeq	gene	3535855	3536808	.	-	.	ID=gene3245;Dbxref=GeneID:1098658;Name=SCE8.17c;gbkey=Gene;gene=SCE8.17c;gene_biotype=protein_coding;gene_synonym=SCE8.17c;locus_tag=SCO3224
NC_003888.3	RefSeq	CDS	3535855	3536808	.	-	0	ID=cds3182;Parent=gene3245;Dbxref=Genbank:NP_627438.1,GeneID:1098658;Name=NP_627438.1;Note=SCE8.17c%2C probable ABC transporter ATP-binding protein%2C len: 317aa%3B similar to many egs. TR:O86629 (EMBL:AL031155) ABC transporter ATP-binding protein from Streptomyces coelicolor (312 aa) fasta scores%3B opt: 1080%2C z-score: 1174.5%2C E(): 0%2C (57.4%25 identity in 303 aa overlap) and SW:BCRA_BACLI bacitracin-resistance ABC transporter from Bacillus licheniformis (306 aa) fasta scores%3B opt: 567%2C z-score: 621.0%2C E(): 2.8e-27%2C (42.4%25 identity in 217 aa overlap). N-terminal region previously sequenced therefore identical to TR:P72389 (EMBL:U51332) partial%2C designated D7 (103 aa) fasta scores%3B opt: 666%2C z-score: 734.8%2C E(): 0%2C (99.0%25 identity in 103 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 151.20%2C E-value 1.9e-41 and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCE8.17c;product=ABC transporter ATP-binding protein;protein_id=NP_627438.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3536200	3536730	.	-	.	ID=id4058;Dbxref=GeneID:1098658;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 151.20%2C E-value 1.9e-41.;gbkey=misc_feature;gene=SCE8.17c
NC_003888.3	RefSeq	sequence_feature	3536686	3536709	.	-	.	ID=id4059;Dbxref=GeneID:1098658;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE8.17c
NC_003888.3	RefSeq	gene	3536945	3538660	.	+	.	ID=gene3246;Dbxref=GeneID:1098659;Name=absA1;gbkey=Gene;gene=absA1;gene_biotype=protein_coding;gene_synonym=absA1,SCE8.18;locus_tag=SCO3225
NC_003888.3	RefSeq	CDS	3536945	3538660	.	+	0	ID=cds3183;Parent=gene3246;Dbxref=Genbank:NP_627439.1,GeneID:1098659;Name=NP_627439.1;Note=SCE8.18%2C absA1%2C two component sensor kinase%2C len: 571aa%3B sequenced previously therefore identical to TR:Q53893 (EMBL:U51332) AbsA1%2C predicted sensor histidine kinase which acts as part of a two component signal transduction system in the global regulation of antibiotic synthesis in Streptomyces coelicolor (571 aa) fasta scores%3B opt: 3782%2C z-score: 3585.7%2C E(): 0%2C (100.0%25 identity in 571 aa overlap).;gbkey=CDS;gene=absA1;product=two component sensor kinase;protein_id=NP_627439.1;transl_table=11
NC_003888.3	RefSeq	gene	3538679	3539347	.	+	.	ID=gene3247;Dbxref=GeneID:1098660;Name=absA2;gbkey=Gene;gene=absA2;gene_biotype=protein_coding;gene_synonym=absA2,SCE8.19;locus_tag=SCO3226
NC_003888.3	RefSeq	CDS	3538679	3539347	.	+	0	ID=cds3184;Parent=gene3247;Dbxref=Genbank:NP_627440.1,GeneID:1098660;Name=NP_627440.1;Note=SCE8.19%2C absA2%2C two component system response regulator%2C len: 222aa%3B sequenced previously therefore identical to TR:Q53894 (EMBL:U51332) AbsA2%2C predicted response regulator which acts as part of a two component signal transduction system in the global regulation of antibiotic synthesis in Streptomyces coelicolor (222 aa) fasta scores%3B opt: 1376%2C z-score: 1584.1%2C E(): 0%2C (100.0%25 identity in 222 aa overlap). Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain%2C score 138.20%2C E-value 1.5e-37 and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 70.90%2C E-value 2.7e-17. Contains a probable helix-turn-helix motif at 171-192aa (Score 1177 (+3.20 SD)).;gbkey=CDS;gene=absA2;product=two component system response regulator;protein_id=NP_627440.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3538682	3539023	.	+	.	ID=id4060;Dbxref=GeneID:1098660;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 138.20%2C E-value 1.5e-37.;gbkey=misc_feature;gene=absA2
NC_003888.3	RefSeq	sequence_feature	3539132	3539329	.	+	.	ID=id4061;Dbxref=GeneID:1098660;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 70.90%2C E-value 2.7e-17.;gbkey=misc_feature;gene=absA2
NC_003888.3	RefSeq	gene	3539337	3540671	.	-	.	ID=gene3248;Dbxref=GeneID:1098661;Name=SCE63.06;gbkey=Gene;gene=SCE63.06;gene_biotype=protein_coding;gene_synonym=SCE63.06,SCE8.20c;locus_tag=SCO3227
NC_003888.3	RefSeq	CDS	3539337	3540671	.	-	0	ID=cds3185;Parent=gene3248;Dbxref=Genbank:NP_733596.1,GeneID:1098661;Name=NP_733596.1;Note=SCE8.20c%2C partial CDS%2C possible aminotransferase%2C len: 431 aa%3B similar to many of undefined function e.g. TR:O52815 (EMBL:AJ223998) a protein similar to aminotransferase%2C from a cluster of genes involved in the biosynthesis of a vancomycin group antibiotic in Amycolatopsis orientalis (Actinomycete) (438 aa) fasta scores%3B opt: 953%2C z-score: 1093.1%2C E(): 0%2C (48.4%25 identity in 426 aa overlap). Also similar to TR:Q64602 (EMBL:Z50144) kynurenine/alpha-aminoadipate aminotransferase from rat (Rattus norvegicus) kidney (425 aa) fasta scores%3B opt: 293%2C z-score: 338.4%2C E(): 1.5e-11%2C (25.8%25 identity in 419 aa overlap).~SCE63.06%2C partial CDS%2C possible aminotransferase%2C len: >45 aa%3B similar to the N-terminal region of TR:O52815 (EMBL:AJ223998) a protein similar to aminotransferase from a cluster of genes nvolved in the biosynthesis of a vancomycin group antibiotic in Amycolatopsis orientalis (Actinomycete) (438 aa) fasta scores%3B opt: 87%2C z-score: 147.0%2C E(): 0.69%2C (45.2%25 identity in 31 aa overlap). The remainder of this CDS lies on the neighbouring Streptomyces coelicolor cosmid E8.;gbkey=CDS;gene=SCE63.06;product=aminotransferase;protein_id=NP_733596.1;transl_table=11
NC_003888.3	RefSeq	gene	3540668	3541801	.	-	.	ID=gene3249;Dbxref=GeneID:1098662;Name=SCE63.05;gbkey=Gene;gene=SCE63.05;gene_biotype=protein_coding;gene_synonym=SCE63.05;locus_tag=SCO3228
NC_003888.3	RefSeq	CDS	3540668	3541801	.	-	0	ID=cds3186;Parent=gene3249;Dbxref=Genbank:NP_627441.1,GeneID:1098662;Name=NP_627441.1;Note=SCE63.05%2C probable glycolate oxidase%2C len: 377 aa%3B similar to many both prokaryotic and eukaryotic e.g. TR:O52792 (EMBL:AJ223998) similar to glycolate oxidase from a cluster of genes nvolved in the biosynthesis of a vancomycin group antibiotic in Amycolatopsis orientalis (Actinomycete) (357 aa) fasta scores%3B opt: 995%2C z-score: 998.4%2C E(): 0%2C (47.5%25 identity in 343 aa overlap) and SW:GOX_SPIOL glycolate oxidase from Spinacia oleracea (spinach) (369 aa) fasta scores%3B opt: 917%2C z-score: 920.7%2C E(): 0%2C (41.9%25 identity in 360 aa overlap). Contains Pfam match to entry PF01070 FMN_dh%2C FMN-dependent de hydrogenase%2C score 412.60%2C E-value 3.6e-120 and PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site.;gbkey=CDS;gene=SCE63.05;product=glycolate oxidase;protein_id=NP_627441.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3540746	3541762	.	-	.	ID=id4062;Dbxref=GeneID:1098662;Note=Pfam match to entry PF01070 FMN_dh%2C FMN-dependent de hydrogenase%2C score 412.60%2C E-value 3.6e-120;gbkey=misc_feature;gene=SCE63.05
NC_003888.3	RefSeq	sequence_feature	3541040	3541060	.	-	.	ID=id4063;Dbxref=GeneID:1098662;Note=PS00557 FMN-dependent alpha-hydroxy acid dehydrogena ses active site.;gbkey=misc_feature;gene=SCE63.05
NC_003888.3	RefSeq	gene	3541951	3543066	.	-	.	ID=gene3250;Dbxref=GeneID:1098663;Name=SCE63.04;gbkey=Gene;gene=SCE63.04;gene_biotype=protein_coding;gene_synonym=SCE63.04;locus_tag=SCO3229
NC_003888.3	RefSeq	CDS	3541951	3543066	.	-	0	ID=cds3187;Parent=gene3250;Dbxref=Genbank:NP_627442.1,GeneID:1098663;Name=NP_627442.1;Note=SCE63.04%2C probable 4-hydroxyphenylpyruvic acid dioxygenase%2C len: 371 aa%3B similar to many both prokaryotic and eukaryotic e.g. TR:O52791 (EMBL:AJ223998) similar to hydroxyphenyl pyruvate dioxygenase from a cluster of genes involved in the biosynthesis of a vancomycin group antibiotic in Amycolatopsis orientalis (Actinomycete) (357 aa) fasta scores%3B opt: 989%2C z-score: 1130.3%2C E(): 0%2C (48.7%25 identity in 355 aa overlap) and SW:HPPD_MOUSE hpd%2C 4-hydroxyphenylpyruvic acid dioxygenase from Mus musculus (mouse) (392 aa) fasta scores%3B opt: 610%2C z-score: 698.5%2C E(): 1.3e-31%2C (31.6%25 identity in 361 aa overlap).;gbkey=CDS;gene=SCE63.04;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=NP_627442.1;transl_table=11
NC_003888.3	RefSeq	gene	3543335	3565726	.	+	.	ID=gene3251;Dbxref=GeneID:1098664;Name=cdaPSI;gbkey=Gene;gene=cdaPSI;gene_biotype=protein_coding;gene_synonym=cdaPSI,SCE63.03c;locus_tag=SCO3230
NC_003888.3	RefSeq	CDS	3543335	3565726	.	+	0	ID=cds3188;Parent=gene3251;Dbxref=Genbank:NP_627443.1,GeneID:1098664;Name=NP_627443.1;Note=SCE63.03c%2C cdaPSI%2C CDA peptide synthetase I%2C len: 7463 aa%3B part of the calcium-dependent antibiotic (CDA) biosynthetic cluster from Streptomyces coelicolor. CDA is a peptide antibiotic which is synthesised non-ribosomally by a multifunctional peptide synthetase enzyme. This CDS encodes a subunit of this enzyme and is suspected to be responsible for the incorperation of the first 6 amino acids into the antibiotic structure. This ORF overlaps the downstream (cdaPSII) ORF by one base indicating possible translational coupling. Contains eight separate Pfam matches to entry PF00668 DUF4%2C Domain of unknown function (U)%2C six separate Pfam matches to entry PF00501 AMP-binding%2C AMP-binding enzyme (A) and six separate Pfam matches to entry PF00550 pp-binding%2C Phosphopantetheine attachment site (P). These Pfam matches cover the full length of the protein in the following order from N to C-terminal U-A-P-U-A-P-U-A-P-U-U-A-P-U-A-P-U-A-P-U.;gbkey=CDS;gene=cdaPSI;product=CDA peptide synthetase I;protein_id=NP_627443.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3543347	3544537	.	+	.	ID=id4064;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 80.00%2C E-value 5e-20;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3543743	3543775	.	+	.	ID=id4065;Dbxref=GeneID:1098664;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3544823	3546055	.	+	.	ID=id4066;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 601.30%2C E-value 5.6e-177;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3545204	3545239	.	+	.	ID=id4067;Dbxref=GeneID:1098664;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3546614	3546808	.	+	.	ID=id4068;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 74.30%2C E-value 6.3e-19;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3546683	3546730	.	+	.	ID=id4069;Dbxref=GeneID:1098664;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3546851	3548053	.	+	.	ID=id4070;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 318.40%2C E-value 8.5e-92;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3548420	3549697	.	+	.	ID=id4071;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 563.60%2C E-value 1.2e-165;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3548825	3548860	.	+	.	ID=id4072;Dbxref=GeneID:1098664;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3549944	3550138	.	+	.	ID=id4073;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 82.80%2C E-value 2.8e-21;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3550013	3550060	.	+	.	ID=id4074;Dbxref=GeneID:1098664;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3550181	3551365	.	+	.	ID=id4075;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 302.10%2C E-value 6.9e-87;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3551687	3552886	.	+	.	ID=id4076;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 484.60%2C E-value 8.1e-142;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3551939	3551956	.	+	.	ID=id4077;Dbxref=GeneID:1098664;Note=PS00343 Gram-positive cocci surface proteins 'anchor ing' hexapeptide.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3552071	3552106	.	+	.	ID=id4078;Dbxref=GeneID:1098664;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3553139	3553321	.	+	.	ID=id4079;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 59.80%2C E-value 6.3e-15;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3553208	3553255	.	+	.	ID=id4080;Dbxref=GeneID:1098664;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3553379	3554587	.	+	.	ID=id4081;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 166.50%2C E-value 4.5e-46;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3554804	3555955	.	+	.	ID=id4082;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 275.20%2C E-value 8.5e-79;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3556244	3557377	.	+	.	ID=id4083;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 435.90%2C E-value 3.5e-127;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3556571	3556606	.	+	.	ID=id4084;Dbxref=GeneID:1098664;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3557630	3557824	.	+	.	ID=id4085;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 87.10%2C E-value 1.8e-22;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3557867	3559057	.	+	.	ID=id4086;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 322.70%2C E-value 4.3e-93;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3559364	3560497	.	+	.	ID=id4087;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 453.50%2C E-value 1.8e-132;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3559691	3559726	.	+	.	ID=id4088;Dbxref=GeneID:1098664;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3560750	3560944	.	+	.	ID=id4089;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 84.80%2C E-value 7.6e-22;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3560819	3560866	.	+	.	ID=id4090;Dbxref=GeneID:1098664;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3560987	3562171	.	+	.	ID=id4091;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 313.50%2C E-value 2.5e-90;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3561275	3561307	.	+	.	ID=id4092;Dbxref=GeneID:1098664;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3562478	3563737	.	+	.	ID=id4093;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 471.80%2C E-value 5.5e-138;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3562901	3562936	.	+	.	ID=id4094;Dbxref=GeneID:1098664;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3563996	3564187	.	+	.	ID=id4095;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 69.40%2C E-value 1.5e-17;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3564065	3564112	.	+	.	ID=id4096;Dbxref=GeneID:1098664;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	sequence_feature	3564236	3565489	.	+	.	ID=id4097;Dbxref=GeneID:1098664;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 108.80%2C E-value 1.1e-28;gbkey=misc_feature;gene=cdaPSI
NC_003888.3	RefSeq	gene	3565723	3576735	.	+	.	ID=gene3252;Dbxref=GeneID:1098665;Name=cdaPS2;gbkey=Gene;gene=cdaPS2;gene_biotype=protein_coding;gene_synonym=cdaPS2,SCE63.02c;locus_tag=SCO3231
NC_003888.3	RefSeq	CDS	3565723	3576735	.	+	0	ID=cds3189;Parent=gene3252;Dbxref=Genbank:NP_627444.1,GeneID:1098665;Name=NP_627444.1;Note=SCE63.02c%2C cdaPS2%2C CDA peptide synthetase II%2C len: 3670 aa%3B part of the calcium-dependent antibiotic (CDA) biosynthetic cluster from Streptomyces coelicolor. CDA is a peptide antibiotic which is synthesised non-ribosomally by a multifunctional peptide synthetase enzyme. This CDS encodes a subunit of this enzyme and is suspected to be responsible for the addition of 3 amino acids to the peptide antibiotic. This ORF overlaps the upstream (cdaPSI) and downstream (cdaPSIII) ORFs by one base indicating possible translational coupling of all three. Contains four separate Pfam matches to entry PF00668 DUF4%2C Domain of unknown function (U)%2C three separate Pfam matches to entry PF00501 AMP-binding%2C AMP-binding enzyme (A) and three separate Pfam matches to entry PF00550 pp-binding%2C Phosphopantetheine attachment site (P). These Pfam matches cover the full length of the protein in the following order from N to C-terminal U-A-P-U-A-P-U-A-P-U. The first and third Pfam matches to entry PF00501 also contain Prosite matches to PS00455  AMP-binding domain signature. All three Pfam matches to entry PF00550 also contain Prosite matches to PS00012 Phosphopantetheine attachment site.;gbkey=CDS;gene=cdaPS2;product=CDA peptide synthetase II;protein_id=NP_627444.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3565756	3566910	.	+	.	ID=id4098;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 290.10%2C E-value 2.7e-83;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3567199	3568329	.	+	.	ID=id4099;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 446.50%2C E-value 2.3e-130;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3567526	3567561	.	+	.	ID=id4100;Dbxref=GeneID:1098665;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3568576	3568770	.	+	.	ID=id4101;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 78.00%2C E-value 5.9e-20;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3568645	3568692	.	+	.	ID=id4102;Dbxref=GeneID:1098665;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3568813	3569991	.	+	.	ID=id4103;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 332.60%2C E-value 4.3e-96;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3570298	3571446	.	+	.	ID=id4104;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 472.70%2C E-value 3e-138;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3571723	3571917	.	+	.	ID=id4105;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 88.00%2C E-value 1e-22;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3571792	3571839	.	+	.	ID=id4106;Dbxref=GeneID:1098665;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3571960	3573180	.	+	.	ID=id4107;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 326.10%2C E-value 3.9e-94;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3573487	3574713	.	+	.	ID=id4108;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 428.90%2C E-value 4.6e-125;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3573871	3573906	.	+	.	ID=id4109;Dbxref=GeneID:1098665;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3574972	3575163	.	+	.	ID=id4110;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopante theine attachment site%2C score 71.90%2C E-value 2.9e-18;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3575041	3575088	.	+	.	ID=id4111;Dbxref=GeneID:1098665;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	sequence_feature	3575248	3576495	.	+	.	ID=id4112;Dbxref=GeneID:1098665;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 87.50%2C E-value 2.7e-22;gbkey=misc_feature;gene=cdaPS2
NC_003888.3	RefSeq	gene	3576735	3583988	.	+	.	ID=gene3253;Dbxref=GeneID:1098666;Name=cdaPS3;gbkey=Gene;gene=cdaPS3;gene_biotype=protein_coding;gene_synonym=cdaPS3,SCE29.01,SCE63.01;locus_tag=SCO3232
NC_003888.3	RefSeq	CDS	3576735	3583988	.	+	0	ID=cds3190;Parent=gene3253;Dbxref=Genbank:NP_733597.1,GeneID:1098666;Name=NP_733597.1;Note=SCE63.01%2C partial CDS%2C cdaPS3%2C CDA peptide synthetase III%2C len: >332 aa%3B Constitutes the N-terminus of cdaPS3%2C CDA peptide synthetase III%2C part of the calcium-dependent antibiotic (CDA) biosynthetic cluster from Streptomyces coelicolor. CDA is a peptide antibiotic which is synthesised non-ribosomally by a multifunctional peptide synthetase enzyme. This partial CDS encodes the N-terminus of a subunit of this enzyme suspected to be responsible for the addition of 2 amino acids to the peptide antibiotic. This ORF overlaps the upstream (cdaPSII) by one base indicating possible translational coupling. Contains Pfam match to entry PF00668 DUF4%2C Domain of unknown function.~SCE29.01%2C partial CDS%2C cdaPS3%2C CDA peptide synthetase III%2C len: >332aa%3B Constitutes the the majority of cdaPS3%2C CDA peptide synthetase III%2C part of the calcium-dependent antibiotic (CDA) biosynthetic cluster from Streptomyces coelicolor. CDA is a peptide antibiotic which is synthesised non-ribosomally by a multifunctional peptide synthetase enzyme. This partial CDS encodes a subunit of this enzyme suspected to be responsible for the addition of 2 amino acids to the peptide antibiotic. This ORF overlaps the upstream (cdaPSII) by one base indicating possible translational coupling. Contains two Pfam matches to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C a Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C a Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain and two Pfam matches to entry PF00550 pp-binding%2C Phosphopantetheine attachment site. Each PF00501 contains a Prosite match PS00455  AMP-binding domain signature. Each PF00550 contains a Prosite match PS00012 Phosphopantetheine attachment site.;gbkey=CDS;gene=cdaPS3;product=CDA peptide synthetase III;protein_id=NP_733597.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3576735	3577715	.	+	.	ID=id4113;Dbxref=GeneID:1098666;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 187.70%2C E-value 1.9e-52.;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3577633	3577733	.	-	.	ID=id4114;Note=Overlap with Streptomyces coelicolor cosmid StE63.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	3578199	3579426	.	+	.	ID=id4115;Dbxref=GeneID:1098666;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 385.20%2C E-value 6.6e-112;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3578589	3578624	.	+	.	ID=id4116;Dbxref=GeneID:1098666;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3579678	3579870	.	+	.	ID=id4117;Dbxref=GeneID:1098666;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 78.40%2C E-value 4.6e-20;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3579747	3579794	.	+	.	ID=id4118;Dbxref=GeneID:1098666;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3579915	3581112	.	+	.	ID=id4119;Dbxref=GeneID:1098666;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function%2C score 335.30%2C E-value 6.9e-97;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3581421	3582612	.	+	.	ID=id4120;Dbxref=GeneID:1098666;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 448.70%2C E-value 5.2e-131;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3581799	3581834	.	+	.	ID=id4121;Dbxref=GeneID:1098666;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3582864	3583056	.	+	.	ID=id4122;Dbxref=GeneID:1098666;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 76.90%2C E-value 1.2e-19;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3582933	3582980	.	+	.	ID=id4123;Dbxref=GeneID:1098666;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	sequence_feature	3583122	3583851	.	+	.	ID=id4124;Dbxref=GeneID:1098666;Note=Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain%2C score 139.00%2C E-value 8.5e-38;gbkey=misc_feature;gene=cdaPS3
NC_003888.3	RefSeq	gene	3583992	3584810	.	+	.	ID=gene3254;Dbxref=GeneID:1098667;Name=SCE29.0;gbkey=Gene;gene=SCE29.0;gene_biotype=protein_coding;gene_synonym=SCE29.0;locus_tag=SCO3233
NC_003888.3	RefSeq	CDS	3583992	3584810	.	+	0	ID=cds3191;Parent=gene3254;Dbxref=Genbank:NP_627445.1,GeneID:1098667;Name=NP_627445.1;Note=SCE29.02%2C probable hydrolase%2C len: 272 aa%3B similar to many e.g. TR:O52809 (EMBL:AJ223998) from the vancomycin biosynthesis cluster of Amycolatopsis orientalis (276 aa) fasta scores%3B opt: 892%2C z-score: 1028.9%2C E(): 0%2C (50.9%25 identity in 271 aa overlap) and TR:O67982 (EMBL:AF003947) PcaL%3B single polypeptide combining 3-oxoadipate enol-lactone hydrolyzing and 4-carboxymuconolactone decarboxylating activityfrom Rhodococcus opacus (400 aa) fasta scores%3B opt: 288%2C z-score: 335.4%2C E(): 2.3e-11%2C (32.0%25 identity in 256 aa overlap). Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 77.80%2C E-value 2.2e-19.;gbkey=CDS;gene=SCE29.0;product=hydrolase;protein_id=NP_627445.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3584151	3584801	.	+	.	ID=id4125;Dbxref=GeneID:1098667;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 77.80%2C E-value 2.2e-19.;gbkey=misc_feature;gene=SCE29.0
NC_003888.3	RefSeq	gene	3584822	3585724	.	+	.	ID=gene3255;Dbxref=GeneID:1098668;Name=SCE29.03;gbkey=Gene;gene=SCE29.03;gene_biotype=protein_coding;gene_synonym=SCE29.03;locus_tag=SCO3234
NC_003888.3	RefSeq	CDS	3584822	3585724	.	+	0	ID=cds3192;Parent=gene3255;Dbxref=Genbank:NP_627446.1,GeneID:1098668;Name=NP_627446.1;Note=SCE29.03%2C possible phosphotransferase%2C len: 300 aa%3B weak similarity to TR:P72441 (EMBL:U70376) spectinomycin phosphotransferase from spectinomycin producer Streptomyces flavopersicus (330 aa) fasta scores%3B opt: 145%2C z-score: 177.0%2C E(): 0.015%2C (25.3%25 identity in 261 aa overlap).;gbkey=CDS;gene=SCE29.03;product=phosphotransferase;protein_id=NP_627446.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3585729	3585791	.	+	.	ID=id4126;Note=Possible stem loop with 8 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3585800	3587647	.	-	.	ID=gene3256;Dbxref=GeneID:1098669;Name=SCE29.04c;gbkey=Gene;gene=SCE29.04c;gene_biotype=protein_coding;gene_synonym=SCE29.04c;locus_tag=SCO3235
NC_003888.3	RefSeq	CDS	3585800	3587647	.	-	0	ID=cds3193;Parent=gene3256;Dbxref=Genbank:NP_627447.1,GeneID:1098669;Name=NP_627447.1;Note=SCE29.04c%2C probable ABC transporter%2C len: 615aa%3B similar to many eg. TR:D1035364 (EMBL:AB019513) ABC transporter from Streptomyces coelicolor fasta scores%3B opt: 783%2C z-score: 794.3%2C E(): 0%2C (42.8%25 identity in 596 aa overlap). C-terminal half contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter (score 184.50%2C E-value 1.7e-51) which itself contains Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). N-terminal half contains Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 129.80%2C E-value 4.9e-35. Contains probable transmembrane hydrophobic regions.;gbkey=CDS;gene=SCE29.04c;product=ABC transporter;protein_id=NP_627447.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3585890	3586444	.	-	.	ID=id4127;Dbxref=GeneID:1098669;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 184.50%2C E-value 1.7e-51;gbkey=misc_feature;gene=SCE29.04c
NC_003888.3	RefSeq	sequence_feature	3586067	3586111	.	-	.	ID=id4128;Dbxref=GeneID:1098669;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SCE29.04c
NC_003888.3	RefSeq	sequence_feature	3586400	3586423	.	-	.	ID=id4129;Dbxref=GeneID:1098669;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE29.04c
NC_003888.3	RefSeq	sequence_feature	3586697	3587503	.	-	.	ID=id4130;Dbxref=GeneID:1098669;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 129.80%2C E-value 4.9e-35.;gbkey=misc_feature;gene=SCE29.04c
NC_003888.3	RefSeq	gene	3587687	3588688	.	-	.	ID=gene3257;Dbxref=GeneID:1098670;Name=SCE29.05c;gbkey=Gene;gene=SCE29.05c;gene_biotype=protein_coding;gene_synonym=SCE29.05c;locus_tag=SCO3236
NC_003888.3	RefSeq	CDS	3587687	3588688	.	-	0	ID=cds3194;Parent=gene3257;Dbxref=Genbank:NP_627448.1,GeneID:1098670;Name=NP_627448.1;Note=SCE29.05c%2C possible oxygenase%2C len: 333 aa%3B similar to TR:Q05581 (EMBL:L06213) clavaminate synthase I%2C an alpha-ketoglutarate-dependent oxygenase central to the biosynthesis of clavulanic acid%2C a potent inhibitor of beta-lactamases (324 aa) fasta scores%3B opt: 498%2C z-score: 571.8%2C E(): 1.5e-24%2C (34.3%25 identity in 283 aa overlap).;gbkey=CDS;gene=SCE29.05c;product=oxygenase;protein_id=NP_627448.1;transl_table=11
NC_003888.3	RefSeq	gene	3588746	3590134	.	-	.	ID=gene3258;Dbxref=GeneID:1098671;Name=SCE29.06c;gbkey=Gene;gene=SCE29.06c;gene_biotype=protein_coding;gene_synonym=SCE29.06c;locus_tag=SCO3237
NC_003888.3	RefSeq	CDS	3588746	3590134	.	-	0	ID=cds3195;Parent=gene3258;Dbxref=Genbank:NP_627449.1,GeneID:1098671;Name=NP_627449.1;Note=SCE29.06c%2C unknown%2C len: 462 aa%3B similar to TR:O69954 (EMBL:AL023862) hypothetical protein from Streptomyces coelicolor (465 aa) fasta scores%3B opt: 2210%2C z-score: 2646.8%2C E(): 0%2C (70.8%25 identity in 452 aa overlap).;gbkey=CDS;gene=SCE29.06c;product=hypothetical protein;protein_id=NP_627449.1;transl_table=11
NC_003888.3	RefSeq	gene	3590146	3591306	.	-	.	ID=gene3259;Dbxref=GeneID:1098672;Name=SCE29.07c;gbkey=Gene;gene=SCE29.07c;gene_biotype=protein_coding;gene_synonym=SCE29.07c;locus_tag=SCO3238
NC_003888.3	RefSeq	CDS	3590146	3591306	.	-	0	ID=cds3196;Parent=gene3259;Dbxref=Genbank:NP_627450.1,GeneID:1098672;Name=NP_627450.1;Note=SCE29.07c%2C unknown%2C len: 386 aa%3B similar to TR:O69953 (EMBL:AL023862) hypothetical protein from Streptomyces coelicolor (391 aa) fasta scores%3B opt: 1396%2C z-score: 1559.7%2C E(): 0%2C (58.6%25 identity in 389 aa overlap). Contains PS00730 AP endonucleases family 2 signature 2.;gbkey=CDS;gene=SCE29.07c;product=hypothetical protein;protein_id=NP_627450.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3590659	3590682	.	-	.	ID=id4131;Dbxref=GeneID:1098672;Note=PS00730 AP endonucleases family 2 signature 2.;gbkey=misc_feature;gene=SCE29.07c
NC_003888.3	RefSeq	gene	3591313	3592182	.	-	.	ID=gene3260;Dbxref=GeneID:1098673;Name=SCE29.08c;gbkey=Gene;gene=SCE29.08c;gene_biotype=protein_coding;gene_synonym=SCE29.08c;locus_tag=SCO3239
NC_003888.3	RefSeq	CDS	3591313	3592182	.	-	0	ID=cds3197;Parent=gene3260;Dbxref=Genbank:NP_627451.1,GeneID:1098673;Name=NP_627451.1;Note=SCE29.08c%2C unknown%2C len: 289 aa%3B similar to TR:O69952 (EMBL:AL023862) hypothetical protein from Streptomyces coelicolor (282 aa) fasta scores%3B opt: 1391%2C z-score: 1679.9%2C E(): 0%2C (72.3%25 identity in 285 aa overlap).;gbkey=CDS;gene=SCE29.08c;product=hypothetical protein;protein_id=NP_627451.1;transl_table=11
NC_003888.3	RefSeq	gene	3592179	3592889	.	-	.	ID=gene3261;Dbxref=GeneID:1098674;Name=SCE29.09c;gbkey=Gene;gene=SCE29.09c;gene_biotype=protein_coding;gene_synonym=SCE29.09c;locus_tag=SCO3240
NC_003888.3	RefSeq	CDS	3592179	3592889	.	-	0	ID=cds3198;Parent=gene3261;Dbxref=Genbank:NP_627452.1,GeneID:1098674;Name=NP_627452.1;Note=SCE29.09c%2C unknown%2C len: 236 aa%3B similar to TR:O69951 (EMBL:AL023862) hypothetical protein from Streptomyces coelicolor (245 aa) fasta scores%3B opt: 416%2C z-score: 464.9%2C E(): 1.4e-18%2C (45.5%25 identity in 220 aa overlap).;gbkey=CDS;gene=SCE29.09c;product=hypothetical protein;protein_id=NP_627452.1;transl_table=11
NC_003888.3	RefSeq	gene	3592886	3593758	.	-	.	ID=gene3262;Dbxref=GeneID:1098675;Name=SCE29.10c;gbkey=Gene;gene=SCE29.10c;gene_biotype=protein_coding;gene_synonym=SCE29.10c;locus_tag=SCO3241
NC_003888.3	RefSeq	CDS	3592886	3593758	.	-	0	ID=cds3199;Parent=gene3262;Dbxref=Genbank:NP_627453.1,GeneID:1098675;Name=NP_627453.1;Note=SCE29.10c%2C possible isomerase%2C len: 290 aa%3B similar to TR:O69950 (EMBL:AL023862) hypothetical protein from Streptomyces coelicolor (315 aa) fasta scores%3B opt: 1116%2C z-score: 1331.4%2C E(): 0%2C (62.5%25 identity in 283 aa overlap). Also similar to SW:XYLA_STRDI xylose isomerase from Streptomyces diastaticus (388 aa) fasta scores%3B opt: 122%2C z-score: 148.8%2C E(): 0.56%2C25.0%25 identity in 296 aa overlap.;gbkey=CDS;gene=SCE29.10c;product=hypothetical protein;protein_id=NP_627453.1;transl_table=11
NC_003888.3	RefSeq	gene	3593755	3594630	.	-	.	ID=gene3263;Dbxref=GeneID:1098676;Name=SCE29.11c;gbkey=Gene;gene=SCE29.11c;gene_biotype=protein_coding;gene_synonym=SCE29.11c;locus_tag=SCO3242
NC_003888.3	RefSeq	CDS	3593755	3594630	.	-	0	ID=cds3200;Parent=gene3263;Dbxref=Genbank:NP_627454.1,GeneID:1098676;Name=NP_627454.1;Note=SCE29.11c%2C possible transferase%2C len: 291 aa%3B similar to TR:O69949 (EMBL:AL023862) hypothetical protein from Streptomyces coelicolor (363 aa) fasta scores%3B opt: 666%2C z-score: 682.9%2C E(): 9.9e-31%2C (51.3%25 identity in 312 aa overlap). Also similar to SW:UBIA_ECOLI 4-hydroxybenzoate octaprenyl transferase from Escherichia coli (290 aa) fasta scores%3B opt: 137%2C z-score: 150.2%2C E(): 0.47%2C (31.8%25 identity in 110 aa overlap).;gbkey=CDS;gene=SCE29.11c;product=puitative transferase;protein_id=NP_627454.1;transl_table=11
NC_003888.3	RefSeq	gene	3594627	3595793	.	-	.	ID=gene3264;Dbxref=GeneID:1098677;Name=SCE29.12c;gbkey=Gene;gene=SCE29.12c;gene_biotype=protein_coding;gene_synonym=SCE29.12c;locus_tag=SCO3243
NC_003888.3	RefSeq	CDS	3594627	3595793	.	-	0	ID=cds3201;Parent=gene3264;Dbxref=Genbank:NP_627455.1,GeneID:1098677;Name=NP_627455.1;Note=SCE29.12c%2C possible myo-inositol phosphate synthase%2C len: 388 aa%3B similar to many e.g. TR:O69948 (EMBL:AL023862) from Streptomyces coelicolor (417 aa) fasta scores%3B opt: 955%2C z-score: 1034.1%2C E(): 0%2C (60.3%25 identity in 380 aa overlap) and SW:INO1_CITPA myo-inositol phosphate synthase from Citrus paradisi (grapefruit) fasta scores%3B opt: 323%2C z-score: 352.1%2C E(): 2.6e-12%2C (26.9%25 identity in 364 aa overlap).;gbkey=CDS;gene=SCE29.12c;product=myo-inositol phosphate synthase;protein_id=NP_627455.1;transl_table=11
NC_003888.3	RefSeq	gene	3595843	3596640	.	-	.	ID=gene3265;Dbxref=GeneID:1098678;Name=SCE29.13c;gbkey=Gene;gene=SCE29.13c;gene_biotype=protein_coding;gene_synonym=SCE29.13c;locus_tag=SCO3244
NC_003888.3	RefSeq	CDS	3595843	3596640	.	-	0	ID=cds3202;Parent=gene3265;Dbxref=Genbank:NP_627456.1,GeneID:1098678;Name=NP_627456.1;Note=SCE29.13c%2C hypothetical protein%2C len: 265 aa%3B similar to SW:Y0BO_MYCTU hypothetical protein from Mycobacterium tuberculosis (529 aa) fasta scores%3B opt: 116%2C z-score: 133.8%2C E(): 3.8%2C (38.2%25 identity in 76 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE29.13c;product=hypothetical protein;protein_id=NP_627456.1;transl_table=11
NC_003888.3	RefSeq	gene	3596708	3597970	.	-	.	ID=gene3266;Dbxref=GeneID:1098679;Name=SCE29.14c;gbkey=Gene;gene=SCE29.14c;gene_biotype=protein_coding;gene_synonym=SCE29.14c;locus_tag=SCO3245
NC_003888.3	RefSeq	CDS	3596708	3597970	.	-	0	ID=cds3203;Parent=gene3266;Dbxref=Genbank:NP_627457.1,GeneID:1098679;Name=NP_627457.1;Note=SCE29.14c%2C possible salicylate hydroxylase ( hypothetical protein)%2C len: 420 aa%3B similar to many e.g. TR:P96555 (EMBL:AB000564) salicylate hydroxylase from Sphingomonas sp. AJ1 (395 aa) fasta scores%3B opt: 830%2C z-score: 827.2%2C E(): 0%2C (41.9%25 identity in 320 aa overlap) and TR:G4104775 (EMBL:AF039534) salicylate hydroxylase from Pseudomonas stutzeri strain AN10 (389 aa) fasta scores%3B opt: 707%2C z-score: 706.0%2C E(): 5.1e-32%2C (34.7%25 identity in 401 aa overlap). Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 91.00%2C E-value 2.4e-23. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE29.14c;product=salicylate hydroxylase;protein_id=NP_627457.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3596846	3597523	.	-	.	ID=id4132;Dbxref=GeneID:1098679;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 91.00%2C E-value 2.4e-23.;gbkey=misc_feature;gene=SCE29.14c
NC_003888.3	RefSeq	gene	3598017	3599009	.	-	.	ID=gene3267;Dbxref=GeneID:1098680;Name=fabH4;gbkey=Gene;gene=fabH4;gene_biotype=protein_coding;gene_synonym=fabH4,SCE29.15c;locus_tag=SCO3246
NC_003888.3	RefSeq	CDS	3598017	3599009	.	-	0	ID=cds3204;Parent=gene3267;Dbxref=Genbank:NP_627458.1,GeneID:1098680;Name=NP_627458.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;gene=fabH4;product=3-oxoacyl-ACP synthase III;protein_id=NP_627458.1;transl_table=11
NC_003888.3	RefSeq	gene	3599006	3600808	.	-	.	ID=gene3268;Dbxref=GeneID:1098681;Name=SCE29.16c;gbkey=Gene;gene=SCE29.16c;gene_biotype=protein_coding;gene_synonym=SCE29.16c;locus_tag=SCO3247
NC_003888.3	RefSeq	CDS	3599006	3600808	.	-	0	ID=cds3205;Parent=gene3268;Dbxref=Genbank:NP_627459.1,GeneID:1098681;Name=NP_627459.1;Note=SCE29.16c%2C possible acyl CoA oxidase%2C len: 600 aa%3B similar to many acyl CoA oxidases%2C especially from eukaryotes e.g. SW:CAOP_RAT acyl CoA oxidase from Rattus norvegicus (rat) (661 aa) fasta scores%3B opt: 462%2C z-score: 477.6%2C E(): 2.7e-19%2C (27.8%25 identity in 425 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCE29.16c;product=acyl CoA oxidase;protein_id=NP_627459.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3599753	3599776	.	-	.	ID=id4133;Dbxref=GeneID:1098681;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE29.16c
NC_003888.3	RefSeq	gene	3600858	3602078	.	-	.	ID=gene3269;Dbxref=GeneID:1098682;Name=fabF3;gbkey=Gene;gene=fabF3;gene_biotype=protein_coding;gene_synonym=fabF3,SCE29.17c;locus_tag=SCO3248
NC_003888.3	RefSeq	CDS	3600858	3602078	.	-	0	ID=cds3206;Parent=gene3269;Dbxref=Genbank:NP_627460.1,GeneID:1098682;Name=NP_627460.1;Note=SCE29.17c%2C fabF3%2C probable 3-oxoacyl-[acyl carrier protein] synthase II%2C len: 406 aa%3B similar to many e.g. TR:O54149 (EMBL:AL021409) 3-oxoacyl acyl carrier protein synthase II from the Red cluster of Streptomyces coelicolor (407 aa) fasta scores%3B opt: 1217%2C z-score: 1314.2%2C E(): 0%2C (50.1%25 identity in 407 aa overlap) and SW:FABF_ECOLI 3-oxoacyl-[acyl carrier protein] synthase II FabF%2C from Escherichia coli (412 aa) fasta scores%3B opt: 843%2C z-score: 912.2%2C E(): 0%2C (35.4%25 identity in 404 aa overlap). Contains Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 92.60%2C E-value 7.7e-24 and Prosite match PS00606 Beta-ketoacyl synthases active site.;gbkey=CDS;gene=fabF3;product=3-oxoacyl-ACP synthase;protein_id=NP_627460.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3600861	3602063	.	-	.	ID=id4134;Dbxref=GeneID:1098682;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 92.60%2C E-value 7.7e-24.;gbkey=misc_feature;gene=fabF3
NC_003888.3	RefSeq	sequence_feature	3601572	3601622	.	-	.	ID=id4135;Dbxref=GeneID:1098682;Note=PS00606 Beta-ketoacyl synthases active site.;gbkey=misc_feature;gene=fabF3
NC_003888.3	RefSeq	gene	3602075	3602320	.	-	.	ID=gene3270;Dbxref=GeneID:1098683;Name=SCE29.18c;gbkey=Gene;gene=SCE29.18c;gene_biotype=protein_coding;gene_synonym=SCE29.18c;locus_tag=SCO3249
NC_003888.3	RefSeq	CDS	3602075	3602320	.	-	0	ID=cds3207;Parent=gene3270;Dbxref=Genbank:NP_627461.1,GeneID:1098683;Name=NP_627461.1;Note=SCE29.18c%2C probable acyl carrier protein%2C len: 81 aa%3B member of a large family including SW:ACP_HELPY acyl carrier protein from Helicobacter pylori (78 aa) fasta scores%3B opt: 121%2C z-score: 179.0%2C E(): 0.012%2C (37.5%25 identity in 64 aa overlap). Contains Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 31.20%2C E-value 5.3e-07.;gbkey=CDS;gene=SCE29.18c;product=acyl carrier protein;protein_id=NP_627461.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3602144	3602302	.	-	.	ID=id4136;Dbxref=GeneID:1098683;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 31.20%2C E-value 5.3e-07.;gbkey=misc_feature;gene=SCE29.18c
NC_003888.3	RefSeq	gene	3602609	3602684	.	+	.	ID=gene3271;Dbxref=GeneID:3240030;Name=SCOt27;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt27
NC_003888.3	RefSeq	tRNA	3602609	3602684	.	+	.	ID=rna37;Parent=gene3271;Dbxref=GeneID:3240030;Note=tRNA Arg anticodon CCT%2C Cove score 77.93;gbkey=tRNA;product=tRNA-Arg
NC_003888.3	RefSeq	exon	3602609	3602684	.	+	.	ID=id4137;Parent=rna37;Dbxref=GeneID:3240030;Note=tRNA Arg anticodon CCT%2C Cove score 77.93;gbkey=tRNA;product=tRNA-Arg
NC_003888.3	RefSeq	gene	3602753	3603907	.	-	.	ID=gene3272;Dbxref=GeneID:1098684;Name=SCE29.19c;gbkey=Gene;gene=SCE29.19c;gene_biotype=protein_coding;gene_synonym=SCE29.19c;locus_tag=SCO3250
NC_003888.3	RefSeq	CDS	3602753	3603907	.	-	0	ID=cds3208;Parent=gene3272;Dbxref=Genbank:NP_627462.1,GeneID:1098684;Name=NP_627462.1;Note=SCE29.19c%2C probable integrase%2C len: 384aa%3B similar to many eg. SW:INTR_STRAM integrase from the integrated conjugative pSAM plasmid of Streptomyces ambofaciens (388 aa) fasta scores%3B opt: 445%2C z-score: 549.1%2C E(): 2.8e-23%2C (26.8%25 identity in 392 aa overlap). Contains Pfam match to entry PF00589 Phage_integrase%2C 'Phage' integrase family%2C score 88.00%2C E-value 1.9e-22.;gbkey=CDS;gene=SCE29.19c;product=integrase;protein_id=NP_627462.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3602807	3603415	.	-	.	ID=id4138;Dbxref=GeneID:1098684;Note=Pfam match to entry PF00589 Phage_integrase%2C 'Phage' integrase family%2C score 88.00%2C E-value 1.9e-22.;gbkey=misc_feature;gene=SCE29.19c
NC_003888.3	RefSeq	gene	3603907	3604107	.	-	.	ID=gene3273;Dbxref=GeneID:1098685;Name=SCE29.20c;gbkey=Gene;gene=SCE29.20c;gene_biotype=protein_coding;gene_synonym=SCE29.20c,SCE39.01c;locus_tag=SCO3251
NC_003888.3	RefSeq	CDS	3603907	3604107	.	-	0	ID=cds3209;Parent=gene3273;Dbxref=Genbank:NP_627463.1,GeneID:1098685;Name=NP_627463.1;Note=SCE39.01c%2C partial CDS%2C probable excisionase%2C len: >33 aa%3B similar to others eg. TR:E1286473 (EMBL:AJ005260) Xis%2C excisionase fron the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (62 aa) fasta scores%3B opt: 143%2C z-score: 280.9%2C E(): 2.4e-08%2C (96.0%25 identity in 25 aa overlap).~SCE29.20c%2C probable excisionase%2C len: 66 aa%3B highly similar to SW:VXIS_STRAM excisionase from the integrated conjugative pSAM plasmid of Streptomyces ambofaciens (62 aa) fasta scores%3B opt: 290%2C z-score: 444.1%2C E(): 2e-17%2C (80.7%25 identity in 57 aa overlap).;gbkey=CDS;gene=SCE29.20c;product=excisionase;protein_id=NP_627463.1;transl_table=11
NC_003888.3	RefSeq	gene	3604104	3605504	.	-	.	ID=gene3274;Dbxref=GeneID:1098686;Name=repSA;gbkey=Gene;gene=repSA;gene_biotype=protein_coding;gene_synonym=repSA,SCE39.02c;locus_tag=SCO3252
NC_003888.3	RefSeq	CDS	3604104	3605504	.	-	0	ID=cds3210;Parent=gene3274;Dbxref=Genbank:NP_627464.1,GeneID:1098686;Name=NP_627464.1;Note=SCE39.02c%2C repSA%2C replication initiator protein%2C len: 466 aa%3B highly similar to TR:E1288125 (EMBL:AJ005260) RepSA%2C replication initiator protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (459 aa) fasta scores%3B opt: 2822%2C z-score: 3195.3%2C E(): 0%2C (89.5%25 identity in 455 aa overlap) and TR:E1355655 (EMBL:AL034355) plasmid replication initiator protein from Streptomyces coelicolor (452 aa) fasta scores%3B opt: 732%2C z-score: 831.1%2C E(): 0%2C (45.8%25 identity in 459 aa overlap).;gbkey=CDS;gene=repSA;product=replication initiator protein;protein_id=NP_627464.1;transl_table=11
NC_003888.3	RefSeq	gene	3605594	3605911	.	-	.	ID=gene3275;Dbxref=GeneID:1098687;Name=SCE39.03c;gbkey=Gene;gene=SCE39.03c;gene_biotype=protein_coding;gene_synonym=SCE39.03c,spdD;locus_tag=SCO3253
NC_003888.3	RefSeq	CDS	3605594	3605911	.	-	0	ID=cds3211;Parent=gene3275;Dbxref=Genbank:NP_627465.1,GeneID:1098687;Name=NP_627465.1;Note=SCE39.03c%2C SpdD protein%2C len: 105aa%3B highly similar to TR:Q07196 (EMBL:AJ005260) SpdD protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (104 aa) fasta scores%3B opt: 491%2C z-score: 476.3%2C E(): 3.2e-19%2C (72.1%25 identity in 104 aa overlap). Contains possible membrane spanning regions;gbkey=CDS;gene=SCE39.03c;product=SpdD protein;protein_id=NP_627465.1;transl_table=11
NC_003888.3	RefSeq	gene	3605935	3606090	.	-	.	ID=gene3276;Dbxref=GeneID:1098688;Name=SCE39.04c;gbkey=Gene;gene=SCE39.04c;gene_biotype=protein_coding;gene_synonym=SCE39.04c,spdC;locus_tag=SCO3254
NC_003888.3	RefSeq	CDS	3605935	3606090	.	-	0	ID=cds3212;Parent=gene3276;Dbxref=Genbank:NP_627466.1,GeneID:1098688;Name=NP_627466.1;Note=SCE39.04c%2C SpdC protein%2C len: 51 aa%3B highly similar to TR:Q07195 (EMBL:AJ005260) SpdC protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (51 aa) fasta scores%3B opt: 286%2C z-score: 418.6%2C E(): 5.2e-16%2C (80.4%25 identity in 51 aa overlap). Largely hydrophobic suggesting membrane association. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE39.04c;product=SpdC protein;protein_id=NP_627466.1;transl_table=11
NC_003888.3	RefSeq	gene	3606102	3606263	.	-	.	ID=gene3277;Dbxref=GeneID:1098689;Name=SCE39.05c;gbkey=Gene;gene=SCE39.05c;gene_biotype=protein_coding;gene_synonym=SCE39.05c,spdB;locus_tag=SCO3255
NC_003888.3	RefSeq	CDS	3606102	3606263	.	-	0	ID=cds3213;Parent=gene3277;Dbxref=Genbank:NP_627467.1,GeneID:1098689;Name=NP_627467.1;Note=SCE39.05c%2C SpdB protein%2C len: 53 aa%3B highly similar to TR:Q07194 (EMBL:AJ005260) SpdB protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (58 aa) fasta scores%3B opt: 291%2C z-score: 448.0%2C E(): 1.2e-17%2C (83.3%25 identity in 48 aa overlap).;gbkey=CDS;gene=SCE39.05c;product=SpdB protein;protein_id=NP_627467.1;transl_table=11
NC_003888.3	RefSeq	gene	3606326	3606979	.	-	.	ID=gene3278;Dbxref=GeneID:1098690;Name=SCE39.06c;gbkey=Gene;gene=SCE39.06c;gene_biotype=protein_coding;gene_synonym=SCE39.06c,spdA;locus_tag=SCO3256
NC_003888.3	RefSeq	CDS	3606326	3606979	.	-	0	ID=cds3214;Parent=gene3278;Dbxref=Genbank:NP_627468.1,GeneID:1098690;Name=NP_627468.1;Note=SCE39.06c%2C SpdA protein%2C len: 217 aa%3B highly similar to TR:Q07193 (EMBL:AJ005260) SpdA protein form the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (224 aa) fasta scores%3B opt: 1071%2C z-score: 973.6%2C E(): 0%2C (75.6%25 identity in 225 aa overlap). Contains possible membrane spanning regions and a possible N-terminal region signal sequence peptide;gbkey=CDS;gene=SCE39.06c;product=SpdA protein;protein_id=NP_627468.1;transl_table=11
NC_003888.3	RefSeq	gene	3607061	3608416	.	-	.	ID=gene3279;Dbxref=GeneID:1098691;Name=SCE39.07c;gbkey=Gene;gene=SCE39.07c;gene_biotype=protein_coding;gene_synonym=SCE39.07c,traSA;locus_tag=SCO3257
NC_003888.3	RefSeq	CDS	3607061	3608416	.	-	0	ID=cds3215;Parent=gene3279;Dbxref=Genbank:NP_627469.1,GeneID:1098691;Name=NP_627469.1;Note=SCE39.07c%2C traSA%2C plasmid transfer protein%2C len: 451 aa%3B similar to many from Streptomyces spp. eg. TR:O69803 (EMBL:AJ005260) from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (415 aa) fasta scores%3B opt: 2515%2C z-score: 2911.8%2C E(): 0%2C (90.6%25 identity in 415 aa overlap) and TR:O86766 (EMBL:AL031035) TraSA integrase fusion protein from the Streptomyces coelicolor cosmid 6A9 (768 aa) fasta scores%3B opt: 2418%2C z-score: 2795.6%2C E(): 0%2C (89.1%25 identity in 405 aa overlap). Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains strongly hydrophilic peak at about aa 300 and TTA codon%2C possible target for bldA regulation. FtsK/SpoIIIE family member.;gbkey=CDS;gene=SCE39.07c;product=plasmid transfer protein;protein_id=NP_627469.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3607853	3607876	.	-	.	ID=id4139;Dbxref=GeneID:1098691;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE39.07c
NC_003888.3	RefSeq	sequence_feature	3608396	3608398	.	-	.	ID=id4140;Dbxref=GeneID:1098691;Note=TTA codon. Possible target for bldA regulation.;gbkey=misc_feature;gene=SCE39.07c
NC_003888.3	RefSeq	gene	3608420	3608776	.	-	.	ID=gene3280;Dbxref=GeneID:1098692;Name=pra;gbkey=Gene;gene=pra;gene_biotype=protein_coding;gene_synonym=pra,SCE39.08c;locus_tag=SCO3258
NC_003888.3	RefSeq	CDS	3608420	3608776	.	-	0	ID=cds3216;Parent=gene3280;Dbxref=Genbank:NP_627470.1,GeneID:1098692;Name=NP_627470.1;Note=SCE39.08c%2C pra%2C regulatory protein%2C len: 118 aa%3B highly similar to TR:Q53733 (EMBL:AJ005260) Pra%2C a protein found to have a regulatory function in the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (116 aa) fasta scores%3B opt: 655%2C z-score: 836.5%2C E(): 0%2C (88.1%25 identity in 118 aa overlap). Also highly similar to and apparently frameshifted (with high confidence in sequence) gene TR:O86764 and TR:O86765 (EMBL:AL031035) from Streptomyces coelicolor cosmid 6A9 fasta scores for TR:O86764%3B opt: 348%2C z-score: 456.1%2C E(): 4.3e-18%2C (88.7%25 identity in 62 aa overlap) and TR:O86765%3B opt: 259%2C z-score: 347.5%2C E(): 4.8e-12%2C (87.2%25 identity in 47 aa overlap).;gbkey=CDS;gene=pra;product=regulatory protein;protein_id=NP_627470.1;transl_table=11
NC_003888.3	RefSeq	gene	3608916	3609695	.	-	.	ID=gene3281;Dbxref=GeneID:1098693;Name=korSA;gbkey=Gene;gene=korSA;gene_biotype=protein_coding;gene_synonym=korSA,SCE39.09c;locus_tag=SCO3259
NC_003888.3	RefSeq	CDS	3608916	3609695	.	-	0	ID=cds3217;Parent=gene3281;Dbxref=Genbank:NP_627471.1,GeneID:1098693;Name=NP_627471.1;Note=SCE39.09c%2C korSA%2C regulatory protein%2C len: 259 aa%3B highly similar to TR:Q07191 (EMBL:AJ005260) KorSA%2C regulatory protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (259 aa) fasta scores%3B opt: 1669%2C z-score: 1948.2%2C E(): 0%2C (98.5%25 identity in 259 aa overlap) and TR:O86763 (EMBL:AL031035) regulatory protein from Streptomyces coelicolor cosmid SC6A9 (259 aa) fasta scores%3B opt: 1655%2C z-score: 1931.9%2C E(): 0%2C (96.9%25 identity in 259 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family.;gbkey=CDS;gene=korSA;product=korSA%2C regulatory protein;protein_id=NP_627471.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3609468	3609647	.	-	.	ID=id4141;Dbxref=GeneID:1098693;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 66.20%2C E-value 6.8e-19.;gbkey=misc_feature;gene=korSA
NC_003888.3	RefSeq	gene	3609789	3610178	.	+	.	ID=gene3282;Dbxref=GeneID:1098694;Name=SCE39.10;gbkey=Gene;gene=SCE39.10;gene_biotype=protein_coding;gene_synonym=SCE39.10;locus_tag=SCO3260
NC_003888.3	RefSeq	CDS	3609789	3610178	.	+	0	ID=cds3218;Parent=gene3282;Dbxref=Genbank:NP_627472.1,GeneID:1098694;Name=NP_627472.1;Note=SCE39.10%2C MutT-like protein%2C len: 129aa%3B highly similar to TR:O69802 (EMBL:AJ005260) from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (131 aa) fasta scores%3B opt: 813%2C z-score: 1042.9%2C E(): 0%2C (94.6%25 identity in 129 aa overlap) and TR:O86762 (EMBL:AL031035) from Streptomyces coelicolor cosmid 6A9 (131 aa) fasta scores%3B opt: 804%2C z-score: 1031.5%2C E(): 0%2C (93.8%25 identity in 129 aa overlap). Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and Prosite match to PS00893 mutT domain signature.;gbkey=CDS;gene=SCE39.10;product=MutT-like protein;protein_id=NP_627472.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3609807	3609923	.	+	.	ID=id4142;Dbxref=GeneID:1098694;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 58.20%2C E-value 3.1e-15.;gbkey=misc_feature;gene=SCE39.10
NC_003888.3	RefSeq	sequence_feature	3609855	3609914	.	+	.	ID=id4143;Dbxref=GeneID:1098694;Note=PS00893 mutT domain signature.;gbkey=misc_feature;gene=SCE39.10
NC_003888.3	RefSeq	stem_loop	3610415	3610564	.	+	.	ID=id4144;Note=Imperfect inverted repeat%2C 9/64 ( 92%25) matches%2C with 22 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	sequence_feature	3610421	3610864	.	+	.	ID=id4145;Note=Possible region containing origin of replication for integrated pSAM2-like plasmid.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	3610622	3613324	.	+	.	ID=id4146;Note=AT-rich region.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3610876	3612171	.	+	.	ID=gene3283;Dbxref=GeneID:1098695;Name=SCE39.11;gbkey=Gene;gene=SCE39.11;gene_biotype=protein_coding;gene_synonym=SCE39.11;locus_tag=SCO3261
NC_003888.3	RefSeq	CDS	3610876	3612171	.	+	0	ID=cds3219;Parent=gene3283;Dbxref=Genbank:NP_627473.1,GeneID:1098695;Name=NP_627473.1;Note=SCE39.11%2C possible ATP-binding protein%2C len: 431 aa%3B limited similarity to others of unknown function eg. TR:Q47527 (EMBL:Z12832) hypothetical ATP-binding protein from Escherichia coli (492 aa) fasta scores%3B opt: 239%2C z-score: 271.8%2C E(): 7.9e-08%2C (32.0%25 identity in 153 aa overlap). Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCE39.11;product=ATP-binding protein;protein_id=NP_627473.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3610885	3610908	.	+	.	ID=id4147;Dbxref=GeneID:1098695;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE39.11
NC_003888.3	RefSeq	gene	3612168	3612917	.	+	.	ID=gene3284;Dbxref=GeneID:1098696;Name=SCE39.12;gbkey=Gene;gene=SCE39.12;gene_biotype=protein_coding;gene_synonym=SCE39.12;locus_tag=SCO3262
NC_003888.3	RefSeq	CDS	3612168	3612917	.	+	0	ID=cds3220;Parent=gene3284;Dbxref=Genbank:NP_627474.1,GeneID:1098696;Name=NP_627474.1;Note=SCE39.12%2C unknown%2C len: 249aa%3B limited similarity to others of unknown function some of which are associated with bacteriophage eg. SW:VE31_LAMBD protein EA31 from bacteriophage lambda (296 aa) fasta scores%3B opt: 133%2C z-score: 164.9%2C E(): 0.071%2C (35.3%25 identity in 85 aa overlap). Contains TTA codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SCE39.12;product=hypothetical protein;protein_id=NP_627474.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3612204	3612206	.	+	.	ID=id4148;Dbxref=GeneID:1098696;Note=TTA codon. Possible target for bldA regulation.;gbkey=misc_feature;gene=SCE39.12
NC_003888.3	RefSeq	gene	3613332	3613631	.	-	.	ID=gene3285;Dbxref=GeneID:1098697;Name=SCE39.13c;gbkey=Gene;gene=SCE39.13c;gene_biotype=protein_coding;gene_synonym=SCE39.13c;locus_tag=SCO3263
NC_003888.3	RefSeq	CDS	3613332	3613631	.	-	0	ID=cds3221;Parent=gene3285;Dbxref=Genbank:NP_627475.1,GeneID:1098697;Name=NP_627475.1;Note=SCE39.13c%2C unknown%2C len: 99 aa%3B similar to TR:CAC44711 (EMBL:AL596251) Streptomyces coelicolor conserved hypothetical protein SCBAC25E3.24%2C 101 aa%3B fasta scores: opt: 441 Z-score: 540.6 E(): 1.8e-22%3B 67.742%25 identity in 93 aa overlap. Contains possible coiled-coil region;gbkey=CDS;gene=SCE39.13c;product=hypothetical protein;protein_id=NP_627475.1;transl_table=11
NC_003888.3	RefSeq	gene	3613628	3614359	.	-	.	ID=gene3286;Dbxref=GeneID:1098698;Name=SCE39.14c;gbkey=Gene;gene=SCE39.14c;gene_biotype=protein_coding;gene_synonym=SCE39.14c;locus_tag=SCO3264
NC_003888.3	RefSeq	CDS	3613628	3614359	.	-	0	ID=cds3222;Parent=gene3286;Dbxref=Genbank:NP_627476.1,GeneID:1098698;Name=NP_627476.1;Note=SCE39.14c%2C possible gntR-family regulator%2C len: 243aa%3B weak similarity to many egs. SW:FARR_ECOLI fatty acyl responsive regulator from Escherichia coli (240 aa) fasta scores%3B opt: 196%2C z-score: 243.9%2C E(): 2.8e-06%2C (24.3%25 identity in 243 aa overlap) and SW:KORA_STRLI KorA protein found to control plasmid transfer in the Streptomyces lividans plasmid pIJ101 (241 aa) fasta scores%3B opt: 158%2C z-score: 198.3%2C E(): 0.00098%2C (22.0%25 identity in 227 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and Prosite match to PS00043 Bacterial regulatory proteins%2C gntR family signature. Also contains probable helix-turn-helix (+3.94 SD) 29-50aa;gbkey=CDS;gene=SCE39.14c;product=GntR family transcriptional regulator;protein_id=NP_627476.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3614159	3614338	.	-	.	ID=id4149;Dbxref=GeneID:1098698;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 71.10%2C E-value 2e-20.;gbkey=misc_feature;gene=SCE39.14c
NC_003888.3	RefSeq	sequence_feature	3614207	3614281	.	-	.	ID=id4150;Dbxref=GeneID:1098698;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;gene=SCE39.14c
NC_003888.3	RefSeq	gene	3614368	3614592	.	-	.	ID=gene3287;Dbxref=GeneID:1098699;Name=SCE39.15c;gbkey=Gene;gene=SCE39.15c;gene_biotype=protein_coding;gene_synonym=SCE39.15c;locus_tag=SCO3265
NC_003888.3	RefSeq	CDS	3614368	3614592	.	-	0	ID=cds3223;Parent=gene3287;Dbxref=Genbank:NP_627477.1,GeneID:1098699;Name=NP_627477.1;Note=SCE39.15c%2C unknown%2C len: 74aa%3B similar to TR:CAC44709 (EMBL:AL596251) conserved hypothetical protein SCBAC25E3.22 from Streptomyces coelicolor (74 aa) fasta scores%3B opt: 356%2C Z-score: 489.1%2C E(): 1.3e-19%2C 77.465%25 identity (77.465%25 ungapped) in 71 aa overlap.;gbkey=CDS;gene=SCE39.15c;product=hypothetical protein;protein_id=NP_627477.1;transl_table=11
NC_003888.3	RefSeq	gene	3614589	3614792	.	-	.	ID=gene3288;Dbxref=GeneID:1098700;Name=SCE39.16c;gbkey=Gene;gene=SCE39.16c;gene_biotype=protein_coding;gene_synonym=SCE39.16c;locus_tag=SCO3266
NC_003888.3	RefSeq	CDS	3614589	3614792	.	-	0	ID=cds3224;Parent=gene3288;Dbxref=Genbank:NP_627478.1,GeneID:1098700;Name=NP_627478.1;Note=SCE39.16c%2C unknown%2C len: 67aa;gbkey=CDS;gene=SCE39.16c;product=hypothetical protein;protein_id=NP_627478.1;transl_table=11
NC_003888.3	RefSeq	gene	3614834	3615034	.	+	.	ID=gene3289;Dbxref=GeneID:1098701;Name=SCE39.17;gbkey=Gene;gene=SCE39.17;gene_biotype=protein_coding;gene_synonym=SCE39.17;locus_tag=SCO3267
NC_003888.3	RefSeq	CDS	3614834	3615034	.	+	0	ID=cds3225;Parent=gene3289;Dbxref=Genbank:NP_627479.1,GeneID:1098701;Name=NP_627479.1;Note=SCE39.17%2C unknown%2C len: 66aa;gbkey=CDS;gene=SCE39.17;product=hypothetical protein;protein_id=NP_627479.1;transl_table=11
NC_003888.3	RefSeq	gene	3615122	3615400	.	-	.	ID=gene3290;Dbxref=GeneID:1098702;Name=SCE39.18c;gbkey=Gene;gene=SCE39.18c;gene_biotype=protein_coding;gene_synonym=SCE39.18c;locus_tag=SCO3268
NC_003888.3	RefSeq	CDS	3615122	3615400	.	-	0	ID=cds3226;Parent=gene3290;Dbxref=Genbank:NP_627480.1,GeneID:1098702;Name=NP_627480.1;Note=SCE39.18c%2C hypothetical protein%2C len: 92 aa%3B similar to TR:CAC44706 (EMBL:AL596251) Streptomyces coelicolor conserved hypothetical protein SCBAC25E3.19%2C 92 aa%3B fasta scores: opt: 471 Z-score: 603.7 E(): 5.4e-26l%3B 81.522%25 identity in 92 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE39.18c;product=hypothetical protein;protein_id=NP_627480.1;transl_table=11
NC_003888.3	RefSeq	gene	3615480	3616235	.	+	.	ID=gene3291;Dbxref=GeneID:1098703;Name=SCE39.19;gbkey=Gene;gene=SCE39.19;gene_biotype=protein_coding;gene_synonym=SCE39.19;locus_tag=SCO3269
NC_003888.3	RefSeq	CDS	3615480	3616235	.	+	0	ID=cds3227;Parent=gene3291;Dbxref=Genbank:NP_627481.1,GeneID:1098703;Name=NP_627481.1;Note=SCE39.19%2C possible gntR-family regulator%2C len: 251 aa%3B some similarity to many egs. TR:Q07191 (EMBL:AJ005260) KorSA protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (259 aa) fasta scores%3B opt: 327%2C z-score: 380.9%2C E(): 6.7e-14%2C (31.0%25 identity in 252 aa overlap) and TR:O86763 (EMBL:AL031035) KorSA transcriptional regulator from Streptomyces coelicolor cosmid 6A9 (259 aa) fasta scores%3B opt: 326%2C z-score: 379.7%2C E(): 7.7e-14%2C (28.9%25 identity in 249 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family. Also contains probable helix-turn-helix (+4.51 SD) 31-52aa.;gbkey=CDS;gene=SCE39.19;product=GntR family transcriptional regulator;protein_id=NP_627481.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3615507	3615686	.	+	.	ID=id4151;Dbxref=GeneID:1098703;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 58.40%2C E-value 1.7e-16.;gbkey=misc_feature;gene=SCE39.19
NC_003888.3	RefSeq	gene	3616286	3616798	.	+	.	ID=gene3292;Dbxref=GeneID:1098704;Name=SCE39.20;gbkey=Gene;gene=SCE39.20;gene_biotype=protein_coding;gene_synonym=SCE39.20;locus_tag=SCO3270
NC_003888.3	RefSeq	CDS	3616286	3616798	.	+	0	ID=cds3228;Parent=gene3292;Dbxref=Genbank:NP_627482.1,GeneID:1098704;Name=NP_627482.1;Note=SCE39.20%2C unknown%2C len: 170aa;gbkey=CDS;gene=SCE39.20;product=hypothetical protein;protein_id=NP_627482.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3616952	3616993	.	+	.	ID=id4152;Note=Perfect inverted repeat%2C 20/20 (100%25) matches%2C with 2 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3617075	3617377	.	+	.	ID=gene3293;Dbxref=GeneID:1098705;Name=SCE39.21;gbkey=Gene;gene=SCE39.21;gene_biotype=protein_coding;gene_synonym=SCE39.21;locus_tag=SCO3271
NC_003888.3	RefSeq	CDS	3617075	3617377	.	+	0	ID=cds3229;Parent=gene3293;Dbxref=Genbank:NP_627483.1,GeneID:1098705;Name=NP_627483.1;Note=SCE39.21%2C possible dehydrogenase%2C len: 100aa%3B similar to TR:Q53783 (EMBL:L33871) vdh%2C valine dehydrogenase from Streptomyces ambofaciens (120 aa) fasta scores%3B opt: 92%2C z-score: 127.5%2C E(): 8.6%2C (29.9%25 identity in 107 aa overlap).;gbkey=CDS;gene=SCE39.21;product=dehydrogenase;protein_id=NP_627483.1;transl_table=11
NC_003888.3	RefSeq	gene	3617612	3617980	.	-	.	ID=gene3294;Dbxref=GeneID:1098706;Name=SCE39.22c;gbkey=Gene;gene=SCE39.22c;gene_biotype=protein_coding;gene_synonym=SCE39.22c;locus_tag=SCO3272
NC_003888.3	RefSeq	CDS	3617612	3617980	.	-	0	ID=cds3230;Parent=gene3294;Dbxref=Genbank:NP_627484.1,GeneID:1098706;Name=NP_627484.1;Note=SCE39.22c%2C possible DNA-binding protein%2C len: 122aa%3B some similarity to TR:O64356 (EMBL:AF064539) Gp48 protein from bacteriophage N15 (95 aa) fasta scores%3B opt: 114%2C z-score: 155.2%2C E(): 0.25%2C (36.6%25 identity in 71 aa overlap). Contains probable helix-turn-helix (+6.85 SD) 82-103aa.;gbkey=CDS;gene=SCE39.22c;product=DNA-binding protein;protein_id=NP_627484.1;transl_table=11
NC_003888.3	RefSeq	gene	3618213	3618479	.	+	.	ID=gene3295;Dbxref=GeneID:1098707;Name=SCE39.23;gbkey=Gene;gene=SCE39.23;gene_biotype=protein_coding;gene_synonym=SCE39.23;locus_tag=SCO3273
NC_003888.3	RefSeq	CDS	3618213	3618479	.	+	0	ID=cds3231;Parent=gene3295;Dbxref=Genbank:NP_627485.1,GeneID:1098707;Name=NP_627485.1;Note=SCE39.23%2C unknown%2C len: 88aa%3B contains possible coiled-coil.;gbkey=CDS;gene=SCE39.23;product=hypothetical protein;protein_id=NP_627485.1;transl_table=11
NC_003888.3	RefSeq	gene	3618476	3618922	.	+	.	ID=gene3296;Dbxref=GeneID:1098708;Name=SCE39.24;gbkey=Gene;gene=SCE39.24;gene_biotype=protein_coding;gene_synonym=SCE39.24;locus_tag=SCO3274
NC_003888.3	RefSeq	CDS	3618476	3618922	.	+	0	ID=cds3232;Parent=gene3296;Dbxref=Genbank:NP_627486.1,GeneID:1098708;Name=NP_627486.1;Note=SCE39.24%2C unknown%2C len: 148aa;gbkey=CDS;gene=SCE39.24;product=hypothetical protein;protein_id=NP_627486.1;transl_table=11
NC_003888.3	RefSeq	gene	3619017	3619469	.	-	.	ID=gene3297;Dbxref=GeneID:1098709;Name=SCE39.25c;gbkey=Gene;gene=SCE39.25c;gene_biotype=protein_coding;gene_synonym=SCE39.25c;locus_tag=SCO3275
NC_003888.3	RefSeq	CDS	3619017	3619469	.	-	0	ID=cds3233;Parent=gene3297;Dbxref=Genbank:NP_627487.1,GeneID:1098709;Name=NP_627487.1;Note=SCE39.25c%2C possible merR-family transcriptional regulator%2C len: 150 aa%3B similar to many e.g. SW:MERR_BACSR MerR%2C mercury resistance operon transcriptional regulator from Bacillus subtilis (132 aa) fasta scores%3B opt: 201%2C z-score: 245.2%2C E(): 2.4e-06%2C (40.3%25 identity in 77 aa overlap) and SW:TIPA_STRLI TipA%2C transcriptional activator of a thiostrepton-induced gene in Streptomyces lividans (253 aa) fasta scores%3B opt: 196%2C z-score: 235.4%2C E(): 8.4e-06%2C (35.5%25 identity in 107 aa overlap). Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and Prosite match to PS00552 Bacterial regulatory proteins%2C merR family signature. Also contains probable helix-turn-helix (+3.27 SD) 13-34 aa;gbkey=CDS;gene=SCE39.25c;product=MerR family transcriptional regulator;protein_id=NP_627487.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3619320	3619427	.	-	.	ID=id4153;Dbxref=GeneID:1098709;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 53.00%2C E-value 6.5e-12.;gbkey=misc_feature;gene=SCE39.25c
NC_003888.3	RefSeq	sequence_feature	3619359	3619427	.	-	.	ID=id4154;Dbxref=GeneID:1098709;Note=PS00552 Bacterial regulatory proteins%2C merR family signature.;gbkey=misc_feature;gene=SCE39.25c
NC_003888.3	RefSeq	gene	3619892	3621391	.	+	.	ID=gene3298;Dbxref=GeneID:1098710;Name=SCE39.26;gbkey=Gene;gene=SCE39.26;gene_biotype=protein_coding;gene_synonym=SCE39.26;locus_tag=SCO3276
NC_003888.3	RefSeq	CDS	3619892	3621391	.	+	0	ID=cds3234;Parent=gene3298;Dbxref=Genbank:NP_627488.1,GeneID:1098710;Name=NP_627488.1;Note=SCE39.26%2C possible integral membrane transporter%2C len: 499aa%3B similar to many eg. TR:Q50443 (EMBL:U50335) ORF2 from Mycobacterium smegmatis (498 aa) fasta scores%3B opt: 2027%2C z-score: 2225.4%2C E(): 0%2C (64.0%25 identity in 478 aa overlap) and TR:O07488 (EMBL:Y13308) proposed sulphate permease from Yersinia enterocolitica (492 aa) fasta scores%3B opt: 1564%2C z-score: 1718.0%2C E(): 0%2C (51.0%25 identity in 482 aa overlap). Contains Pfam match to entry PF00916 Sulfate_transp%2C Sulfate transporter family. Also contains several possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE39.26;product=integral membrane transporter;protein_id=NP_627488.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3620231	3621082	.	+	.	ID=id4155;Dbxref=GeneID:1098710;Note=Pfam match to entry PF00916 Sulfate_transp%2C Sulfate transporter family%2C score 322.40%2C E-value 5.4e-93.;gbkey=misc_feature;gene=SCE39.26
NC_003888.3	RefSeq	gene	3621404	3622270	.	-	.	ID=gene3299;Dbxref=GeneID:1098711;Name=SCE39.27c;gbkey=Gene;gene=SCE39.27c;gene_biotype=protein_coding;gene_synonym=SCE39.27c;locus_tag=SCO3277
NC_003888.3	RefSeq	CDS	3621404	3622270	.	-	0	ID=cds3235;Parent=gene3299;Dbxref=Genbank:NP_627489.1,GeneID:1098711;Name=NP_627489.1;Note=SCE39.27c%2C possible phosphotransferase%2C len: 288aa%3B similar to many antibiotic phosphotransferases eg. TR:Q53826 (EMBL:U13078) capreomycin phosphotransferase from Streptomyces capreolus (281 aa) fasta scores%3B opt: 157%2C z-score: 183.5%2C E(): 0.0065%2C (28.3%25 identity in 226 aa overlap).;gbkey=CDS;gene=SCE39.27c;product=phosphotransferase;protein_id=NP_627489.1;transl_table=11
NC_003888.3	RefSeq	gene	3622465	3622593	.	+	.	ID=gene3300;Dbxref=GeneID:1098712;Name=SCE39.28;gbkey=Gene;gene=SCE39.28;gene_biotype=protein_coding;gene_synonym=SCE39.28;locus_tag=SCO3278
NC_003888.3	RefSeq	CDS	3622465	3622593	.	+	0	ID=cds3236;Parent=gene3300;Dbxref=Genbank:NP_627490.1,GeneID:1098712;Name=NP_627490.1;Note=SCE39.28%2C unknown%2C len: 42aa;gbkey=CDS;gene=SCE39.28;product=hypothetical protein;protein_id=NP_627490.1;transl_table=11
NC_003888.3	RefSeq	gene	3622590	3623804	.	+	.	ID=gene3301;Dbxref=GeneID:1098713;Name=SCE39.29;gbkey=Gene;gene=SCE39.29;gene_biotype=protein_coding;gene_synonym=SCE39.29;locus_tag=SCO3279
NC_003888.3	RefSeq	CDS	3622590	3623804	.	+	0	ID=cds3237;Parent=gene3301;Dbxref=Genbank:NP_627491.1,GeneID:1098713;Name=NP_627491.1;Note=SCE39.29%2C possible integral membrane efflux protein%2C len: 404aa%3B similar to many eg. SW:KEFB_ECOLI glutathione-regulated potassium-efflux system protein%2C KefB (601 aa) fasta scores%3B opt: 250%2C z-score: 293.4%2C E(): 5e-09%2C (27.1%25 identity in 414 aa overlap). Contains several potential membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE39.29;product=integral membrane efflux protein;protein_id=NP_627491.1;transl_table=11
NC_003888.3	RefSeq	gene	3623801	3624412	.	+	.	ID=gene3302;Dbxref=GeneID:1098714;Name=SCE39.30;gbkey=Gene;gene=SCE39.30;gene_biotype=protein_coding;gene_synonym=SCE39.30;locus_tag=SCO3280
NC_003888.3	RefSeq	CDS	3623801	3624412	.	+	0	ID=cds3238;Parent=gene3302;Dbxref=Genbank:NP_627492.1,GeneID:1098714;Name=NP_627492.1;Note=SCE39.30%2C membrane protein%2C len: 203 aa%3B similar to another from Streptomyces coelicolor cosmid 5C7 TR:O86731 (EMBL:AL031515) hypothetical protein (314 aa) fasta scores%3B opt: 163%2C z-score: 187.7%2C E(): 0.0038%2C (31.8%25 identity in 154 aa overlap). Contains histidine-rich N-terminal region. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE39.30;product=hypothetical protein;protein_id=NP_627492.1;transl_table=11
NC_003888.3	RefSeq	gene	3624449	3624859	.	-	.	ID=gene3303;Dbxref=GeneID:1098715;Name=SCE39.31c;gbkey=Gene;gene=SCE39.31c;gene_biotype=protein_coding;gene_synonym=SCE39.31c;locus_tag=SCO3281
NC_003888.3	RefSeq	CDS	3624449	3624859	.	-	0	ID=cds3239;Parent=gene3303;Dbxref=Genbank:NP_627493.1,GeneID:1098715;Name=NP_627493.1;Note=SCE39.31c%2C unknown%2C len: 136aa%3B similar to TR:O68643 (EMBL:AF052749) hypothetical protein from Pseudomonas putida (109 aa) fasta scores%3B opt: 359%2C z-score: 415.3%2C E(): 8.1e-16%2C (41.3%25 identity in 109 aa overlap).;gbkey=CDS;gene=SCE39.31c;product=hypothetical protein;protein_id=NP_627493.1;transl_table=11
NC_003888.3	RefSeq	gene	3625007	3625663	.	+	.	ID=gene3304;Dbxref=GeneID:1098716;Name=cobH;gbkey=Gene;gene=cobH;gene_biotype=protein_coding;gene_synonym=SCE39.32;locus_tag=SCO3282
NC_003888.3	RefSeq	CDS	3625007	3625663	.	+	0	ID=cds3240;Parent=gene3304;Dbxref=Genbank:NP_627494.1,GeneID:1098716;Name=NP_627494.1;Note=catalyzes the interconversion of precorrin-8X and hydrogenobyrinate;gbkey=CDS;gene=cobH;product=precorrin-8X methylmutase;protein_id=NP_627494.1;transl_table=11
NC_003888.3	RefSeq	gene	3625695	3626462	.	-	.	ID=gene3305;Dbxref=GeneID:1098717;Name=cbiJ;gbkey=Gene;gene=cbiJ;gene_biotype=protein_coding;gene_synonym=cbiJ,cobK;locus_tag=SCO3283
NC_003888.3	RefSeq	CDS	3625695	3626462	.	-	0	ID=cds3241;Parent=gene3305;Dbxref=Genbank:NP_627495.1,GeneID:1098717;Name=NP_627495.1;Note=CobK/CbiJ%3B there are 2 pathways for cobalamin (vitamin B12) production%2C one aerobic (ex. P. denitrificans)%2C the other anaerobic (ex. S. typhimurium)%3B the CobK/CbiJ perform similar reactions in both%3B the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur%3B CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6;gbkey=CDS;gene=cbiJ;product=cobalt-precorrin-6x reductase;protein_id=NP_627495.1;transl_table=11
NC_003888.3	RefSeq	gene	3626633	3628768	.	+	.	ID=gene3306;Dbxref=GeneID:1098718;Name=SCE15.01;gbkey=Gene;gene=SCE15.01;gene_biotype=protein_coding;gene_synonym=SCE15.01,SCE39.34;locus_tag=SCO3284
NC_003888.3	RefSeq	CDS	3626633	3628768	.	+	0	ID=cds3242;Parent=gene3306;Dbxref=Genbank:NP_733598.1,GeneID:1098718;Name=NP_733598.1;Note=SCE15.01%2C partial CDS%2C conserved hypothetical protein%2C len: >436aa%3B similar to C-terminal region of TR:CAA22732 (EMBL:AL035161) another conserved hypothetical protein from Streptomyces coelicolor (860 aa) fasta scores%3B opt: 922%2C z-score: 1011.5%2C E(): 0%2C (39.5%25 identity in 425 aa overlap).~SCE39.34%2C unknown%2C len: >307aa%3B similar to TR:E1370406 (EMBL:AL035161) conserved hypothetical protein from Streptomyces coelicolor (860 aa) fasta scores%3B opt: 254%2C z-score: 277.0%2C E(): 4e-08%2C (29.2%25 identity in 277 aa overlap) TR:O86875 (EMBL:U22894) hypothetical protein from Streptomyces lividans (547 aa) fasta scores%3B opt: 226%2C z-score: 249.7%2C E(): 1.3e-06%2C (33.0%25 identity in 197 aa overlap).;gbkey=CDS;gene=SCE15.01;product=hypothetical protein;protein_id=NP_733598.1;transl_table=11
NC_003888.3	RefSeq	gene	3628805	3634123	.	-	.	ID=gene3307;Dbxref=GeneID:1098719;Name=SCE15.02c;gbkey=Gene;gene=SCE15.02c;gene_biotype=protein_coding;gene_synonym=SCE15.02c;locus_tag=SCO3285
NC_003888.3	RefSeq	CDS	3628805	3634123	.	-	0	ID=cds3243;Parent=gene3307;Dbxref=Genbank:NP_627496.1,GeneID:1098719;Name=NP_627496.1;Note=SCE15.02c%2C large glycine/alanine rich protein%2C len: 1772aa;gbkey=CDS;gene=SCE15.02c;product=large glycine/alanine rich protein;protein_id=NP_627496.1;transl_table=11
NC_003888.3	RefSeq	gene	3634209	3636242	.	-	.	ID=gene3308;Dbxref=GeneID:1098720;Name=SCE15.03c;gbkey=Gene;gene=SCE15.03c;gene_biotype=protein_coding;gene_synonym=SCE15.03c;locus_tag=SCO3286
NC_003888.3	RefSeq	CDS	3634209	3636242	.	-	0	ID=cds3244;Parent=gene3308;Dbxref=Genbank:NP_627497.1,GeneID:1098720;Name=NP_627497.1;Note=SCE15.03%2C hypothetical protein%2C len: 677 aa%3B weak similarity to SW:YQIK_ECOLI hypothetical protein from Escherichia coli (553 aa) fasta scores%3B opt: 542%2C z-score: 501.2%2C E(): 1.3e-20%2C (27.0%25 identity in 504 aa overlap). Contains possible N-terminal region signal peptide sequence also contains a highly hidrophilic central part of the protein;gbkey=CDS;gene=SCE15.03c;product=hypothetical protein;protein_id=NP_627497.1;transl_table=11
NC_003888.3	RefSeq	gene	3636329	3636847	.	+	.	ID=gene3309;Dbxref=GeneID:1098721;Name=SCE15.04;gbkey=Gene;gene=SCE15.04;gene_biotype=protein_coding;gene_synonym=SCE15.04;locus_tag=SCO3287
NC_003888.3	RefSeq	CDS	3636329	3636847	.	+	0	ID=cds3245;Parent=gene3309;Dbxref=Genbank:NP_627498.1,GeneID:1098721;Name=NP_627498.1;Note=SCE15.04%2C serine/arginine rich protein%2C len: 172aa;gbkey=CDS;gene=SCE15.04;product=serine/arginine rich protein;protein_id=NP_627498.1;transl_table=11
NC_003888.3	RefSeq	gene	3636856	3637587	.	+	.	ID=gene3310;Dbxref=GeneID:1098722;Name=SCE15.05;gbkey=Gene;gene=SCE15.05;gene_biotype=protein_coding;gene_synonym=SCE15.05;locus_tag=SCO3288
NC_003888.3	RefSeq	CDS	3636856	3637587	.	+	0	ID=cds3246;Parent=gene3310;Dbxref=Genbank:NP_627499.1,GeneID:1098722;Name=NP_627499.1;Note=SCE15.05%2C possible integral membrane protein%2C len: 243aa%3B similar to TR:Q53715 (EMBL:L06249) hypothetical protein from Streptomyces antibioticus (234 aa) fasta scores%3B opt: 292%2C z-score: 298.6%2C E(): 2.5e-09%2C (33.2%25 identity in 241 aa overlap). Contains a possible membrane spanning hydrophobic region and a 8x5 degenerate repeat of GT***.;gbkey=CDS;gene=SCE15.05;product=hypothetical protein;protein_id=NP_627499.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3637078	3637197	.	+	.	ID=id4156;Dbxref=GeneID:1098722;Note=Translation gives 8x5 degenerate repeat of GT***.;gbkey=repeat_region;gene=SCE15.05
NC_003888.3	RefSeq	gene	3637594	3639204	.	+	.	ID=gene3311;Dbxref=GeneID:1098723;Name=SCE15.06;gbkey=Gene;gene=SCE15.06;gene_biotype=protein_coding;gene_synonym=SCE15.06;locus_tag=SCO3289
NC_003888.3	RefSeq	CDS	3637594	3639204	.	+	0	ID=cds3247;Parent=gene3311;Dbxref=Genbank:NP_627500.1,GeneID:1098723;Name=NP_627500.1;Note=SCE15.06%2C possible large membrane protein%2C len: 536 aa%3B contains a possible membrane spanning hydrophobic region;gbkey=CDS;gene=SCE15.06;product=large membrane protein;protein_id=NP_627500.1;transl_table=11
NC_003888.3	RefSeq	gene	3639201	3639950	.	+	.	ID=gene3312;Dbxref=GeneID:1098724;Name=SCE15.07;gbkey=Gene;gene=SCE15.07;gene_biotype=protein_coding;gene_synonym=SCE15.07;locus_tag=SCO3290
NC_003888.3	RefSeq	CDS	3639201	3639950	.	+	0	ID=cds3248;Parent=gene3312;Dbxref=Genbank:NP_627501.1,GeneID:1098724;Name=NP_627501.1;Note=SCE15.07%2C unknown%2C len: 249aa;gbkey=CDS;gene=SCE15.07;product=hypothetical protein;protein_id=NP_627501.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3640014	3640063	.	+	.	ID=id4157;Note=Imperfect inverted repeat (20/22) with 6 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3640178	3641611	.	+	.	ID=gene3313;Dbxref=GeneID:1098725;Name=SCE15.08;gbkey=Gene;gene=SCE15.08;gene_biotype=protein_coding;gene_synonym=SCE15.08;locus_tag=SCO3291
NC_003888.3	RefSeq	CDS	3640178	3641611	.	+	0	ID=cds3249;Parent=gene3313;Dbxref=Genbank:NP_627502.1,GeneID:1098725;Name=NP_627502.1;Note=SCE15.08%2C possible regulatory protein%2C len: 477 aa%3B N-terminal region similar to others from Actinomycetes eg. SW:DNRI_STRPE regulatory protein from Streptomyces peucetius (272 aa) fasta scores%3B opt: 143%2C z-score: 162.9%2C E(): 0.092%2C (27.8%25 identity in 241 aa overlap).;gbkey=CDS;gene=SCE15.08;product=regulatory protein;protein_id=NP_627502.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3641519	3641554	.	+	.	ID=id4158;Dbxref=GeneID:1098725;Note=Perfect inverted repeat (18/18).;gbkey=repeat_region;gene=SCE15.08
NC_003888.3	RefSeq	gene	3641739	3642248	.	-	.	ID=gene3314;Dbxref=GeneID:1098726;Name=SCE15.09c;gbkey=Gene;gene=SCE15.09c;gene_biotype=protein_coding;gene_synonym=SCE15.09c;locus_tag=SCO3292
NC_003888.3	RefSeq	CDS	3641739	3642248	.	-	0	ID=cds3250;Parent=gene3314;Dbxref=Genbank:NP_627503.1,GeneID:1098726;Name=NP_627503.1;Note=SCE15.09c%2C unknown%2C len: 169aa;gbkey=CDS;gene=SCE15.09c;product=hypothetical protein;protein_id=NP_627503.1;transl_table=11
NC_003888.3	RefSeq	gene	3642308	3642811	.	-	.	ID=gene3315;Dbxref=GeneID:1098727;Name=SCE15.10c;gbkey=Gene;gene=SCE15.10c;gene_biotype=protein_coding;gene_synonym=SCE15.10c;locus_tag=SCO3293
NC_003888.3	RefSeq	CDS	3642308	3642811	.	-	0	ID=cds3251;Parent=gene3315;Dbxref=Genbank:NP_627504.1,GeneID:1098727;Name=NP_627504.1;Note=SCE15.10c%2C possible small integral membrane protein%2C len: 167aa%3B contains a possible membrane spanning hydrophobic region.;gbkey=CDS;gene=SCE15.10c;product=small integral membrane protein;protein_id=NP_627504.1;transl_table=11
NC_003888.3	RefSeq	gene	3642817	3644163	.	-	.	ID=gene3316;Dbxref=GeneID:1098728;Name=SCE15.11c;gbkey=Gene;gene=SCE15.11c;gene_biotype=protein_coding;gene_synonym=SCE15.11c;locus_tag=SCO3294
NC_003888.3	RefSeq	CDS	3642817	3644163	.	-	0	ID=cds3252;Parent=gene3316;Dbxref=Genbank:NP_627505.1,GeneID:1098728;Name=NP_627505.1;Note=SCE15.11c%2C possible transferase%2C len: 448aa%3B weak similarity to SW:MTRD_METMA N5-methyltetrahydromethanopterin coenzyme M methyltransferase from Methanosarcina mazei (250 aa) fasta scores%3B opt: 126%2C z-score: 151.3%2C E(): 0.41%2C (26.3%25 identity in 137 aa overlap). Contains TTA leucine codon in the N-terminal region - possible target for bldA regulation.;gbkey=CDS;gene=SCE15.11c;product=transferase;protein_id=NP_627505.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3644125	3644127	.	-	.	ID=id4159;Dbxref=GeneID:1098728;Note=tta leucine codon. Possible target for bldA regulation.;gbkey=misc_feature;gene=SCE15.11c
NC_003888.3	RefSeq	gene	3644267	3644935	.	-	.	ID=gene3317;Dbxref=GeneID:1098729;Name=SCE15.12c;gbkey=Gene;gene=SCE15.12c;gene_biotype=protein_coding;gene_synonym=SCE15.12c;locus_tag=SCO3295
NC_003888.3	RefSeq	CDS	3644267	3644935	.	-	0	ID=cds3253;Parent=gene3317;Dbxref=Genbank:NP_627506.1,GeneID:1098729;Name=NP_627506.1;Note=SCE15.12c%2C possible oxidoreductase%2C len: 222aa%3B similar to TR:O85762 (EMBL:AF075709) NADH dependent FMN reductase from Pseudomonas putida (200 aa) fasta scores%3B opt: 208%2C z-score: 241.1%2C E(): 4e-06%2C (35.7%25 identity in 129 aa overlap).;gbkey=CDS;gene=SCE15.12c;product=oxidoreductase;protein_id=NP_627506.1;transl_table=11
NC_003888.3	RefSeq	gene	3644932	3646035	.	-	.	ID=gene3318;Dbxref=GeneID:1098730;Name=SCE15.13c;gbkey=Gene;gene=SCE15.13c;gene_biotype=protein_coding;gene_synonym=SCE15.13c;locus_tag=SCO3296
NC_003888.3	RefSeq	CDS	3644932	3646035	.	-	0	ID=cds3254;Parent=gene3318;Dbxref=Genbank:NP_627507.1,GeneID:1098730;Name=NP_627507.1;Note=SCE15.13c%2C possible oxidoreductase%2C len: 367aa%3B some similarity to TR:CAA77275 (EMBL:Y18729) F420-dependent alcoholdehydrogenase from Methanoculleus thermophilicus (330 aa) fasta scores%3B opt: 211%2C z-score: 252.%2C1 E(): 9.9e-07%2C (29.0%25 identity in 183 aa overlap).;gbkey=CDS;gene=SCE15.13c;product=oxidoreductase;protein_id=NP_627507.1;transl_table=11
NC_003888.3	RefSeq	gene	3646131	3646469	.	+	.	ID=gene3319;Dbxref=GeneID:1098731;Name=SCE15.14;gbkey=Gene;gene=SCE15.14;gene_biotype=protein_coding;gene_synonym=SCE15.14;locus_tag=SCO3297
NC_003888.3	RefSeq	CDS	3646131	3646469	.	+	0	ID=cds3255;Parent=gene3319;Dbxref=Genbank:NP_627508.1,GeneID:1098731;Name=NP_627508.1;Note=SCE15.14%2C membrane protein%2C len: 112 aa%3B similar to others e.g. SW:YQ09_MYCTU (EMBL:Z80225) Mycobacterium tuberculosis hypothetical protein (110 aa) fasta scores%3B opt: 597%2C z-score: 741.6%2C E(): 0%2C (73.1%25 identity in 108 aa overlap) Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE15.14;product=hypothetical protein;protein_id=NP_627508.1;transl_table=11
NC_003888.3	RefSeq	gene	3646539	3647321	.	+	.	ID=gene3320;Dbxref=GeneID:1098732;Name=SCE15.15;gbkey=Gene;gene=SCE15.15;gene_biotype=protein_coding;gene_synonym=SCE15.15;locus_tag=SCO3298
NC_003888.3	RefSeq	CDS	3646539	3647321	.	+	0	ID=cds3256;Parent=gene3320;Dbxref=Genbank:NP_627509.1,GeneID:1098732;Name=NP_627509.1;Note=SCE15.15%2C possible oxidoreductase%2C len: 260aa%3B similar to many egs. SW:YV10_MYCTU oxidoreductase from Mycobacterium tuberculosis (251 aa) fasta scores%3B opt: 826%2C z-score: 880.1%2C E():0%2C (57.2%25 identity in 243 aa overlap) and TR:O54197 (EMBL:AJ000671) clavulanate-9-aldehyde reductase from Streptomyces clavuligerus (247 aa) fasta scores%3B opt: 493%2C z-score: 530.5%2C E(): 3.1e-22%2C (39.8%25 identity in 249 aa overlap). Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SCE15.15;product=oxidoreductase;protein_id=NP_627509.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3646575	3647120	.	+	.	ID=id4160;Dbxref=GeneID:1098732;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 192.70%2C E-value 5.7e-54.;gbkey=misc_feature;gene=SCE15.15
NC_003888.3	RefSeq	gene	3647355	3648548	.	-	.	ID=gene3321;Dbxref=GeneID:1098733;Name=SCE15.16c;gbkey=Gene;gene=SCE15.16c;gene_biotype=protein_coding;gene_synonym=SCE15.16c;locus_tag=SCO3299
NC_003888.3	RefSeq	CDS	3647355	3648548	.	-	0	ID=cds3257;Parent=gene3321;Dbxref=Genbank:NP_627510.1,GeneID:1098733;Name=NP_627510.1;Note=SCE15.16c%2C unknown%2C len: 397aa%3B similar to many e.g. SW:RTCB_ECOLI hypothetical protein from Escherichia coli (408 aa) fasta scores%3B opt: 809%2C z-score: 903.2%2C E(): 0%2C 46.8%25 identity in 408 aa overlap. Contains Pfam match to entry PF01139 UPF0027%2C Uncharacterized protein family UPF0027.;gbkey=CDS;gene=SCE15.16c;product=hypothetical protein;protein_id=NP_627510.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3647358	3648548	.	-	.	ID=id4161;Dbxref=GeneID:1098733;Note=Pfam match to entry PF01139 UPF0027%2C Uncharacterized protein family UPF0027 %2C score 317.70%2C E-value 1.4e-91.;gbkey=misc_feature;gene=SCE15.16c
NC_003888.3	RefSeq	gene	3648648	3649631	.	+	.	ID=gene3322;Dbxref=GeneID:1098734;Name=SCE15.17;gbkey=Gene;gene=SCE15.17;gene_biotype=protein_coding;gene_synonym=SCE15.17;locus_tag=SCO3300
NC_003888.3	RefSeq	CDS	3648648	3649631	.	+	0	ID=cds3258;Parent=gene3322;Dbxref=Genbank:NP_627511.1,GeneID:1098734;Name=NP_627511.1;Note=SCE15.17%2C possible  serine-rich protein%2C len: 320aa%3B contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCE15.17;product=hypothetical protein;protein_id=NP_627511.1;transl_table=11
NC_003888.3	RefSeq	gene	3649764	3650615	.	+	.	ID=gene3323;Dbxref=GeneID:1098735;Name=SCE15.18;gbkey=Gene;gene=SCE15.18;gene_biotype=protein_coding;gene_synonym=SCE15.18;locus_tag=SCO3301
NC_003888.3	RefSeq	CDS	3649764	3650615	.	+	0	ID=cds3259;Parent=gene3323;Dbxref=Genbank:NP_627512.1,GeneID:1098735;Name=NP_627512.1;Note=SCE15.18%2C possible hypothetical protein%2C len: 283aa%3B contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCE15.18;product=hypothetical protein;protein_id=NP_627512.1;transl_table=11
NC_003888.3	RefSeq	gene	3650705	3652006	.	+	.	ID=gene3324;Dbxref=GeneID:1098736;Name=SCE15.19;gbkey=Gene;gene=SCE15.19;gene_biotype=protein_coding;gene_synonym=SCE15.19;locus_tag=SCO3302
NC_003888.3	RefSeq	CDS	3650705	3652006	.	+	0	ID=cds3260;Parent=gene3324;Dbxref=Genbank:NP_627513.1,GeneID:1098736;Name=NP_627513.1;Note=SCE15.19%2C possible integral membrane protein%2C len: 433aa%3B contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE15.19;product=hypothetical protein;protein_id=NP_627513.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3652200	3652245	.	+	.	ID=id4162;Note=Perfect inverted repeat 20/20 with 6 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3652259	3654001	.	-	.	ID=gene3325;Dbxref=GeneID:1098737;Name=lysK;gbkey=Gene;gene=lysK;gene_biotype=protein_coding;gene_synonym=SCE15.20c,SCE68.01c;locus_tag=SCO3303
NC_003888.3	RefSeq	CDS	3652259	3654001	.	-	0	ID=cds3261;Parent=gene3325;Dbxref=Genbank:NP_733599.1,GeneID:1098737;Name=NP_733599.1;Note=class I%3B LysRS1%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine;gbkey=CDS;gene=lysK;product=lysyl-tRNA synthetase;protein_id=NP_733599.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3653846	3653875	.	-	.	ID=id4163;Dbxref=GeneID:1098737;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=lysK
NC_003888.3	RefSeq	ribosome_entry_site	3654004	3654007	.	-	.	ID=id4164;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3654175	3655935	.	+	.	ID=gene3326;Dbxref=GeneID:1098738;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;gene_synonym=SCE68.02;locus_tag=SCO3304
NC_003888.3	RefSeq	CDS	3654175	3655935	.	+	0	ID=cds3262;Parent=gene3326;Dbxref=Genbank:NP_627514.1,GeneID:1098738;Name=NP_627514.1;Note=catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase;gbkey=CDS;gene=argS;product=arginyl-tRNA synthetase;protein_id=NP_627514.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3654187	3655932	.	+	.	ID=id4165;Dbxref=GeneID:1098738;Note=Pfam match to entry PF00750 tRNA-synt_1d%2C tRNA synthetases class I (R)%2C score 499.40%2C E-value 2.7e-146;gbkey=misc_feature;gene=argS
NC_003888.3	RefSeq	sequence_feature	3654553	3654588	.	+	.	ID=id4166;Dbxref=GeneID:1098738;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=argS
NC_003888.3	RefSeq	ribosome_entry_site	3656061	3656064	.	+	.	ID=id4167;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3656071	3657396	.	+	.	ID=gene3327;Dbxref=GeneID:1098739;Name=SCE68.03;gbkey=Gene;gene=SCE68.03;gene_biotype=protein_coding;gene_synonym=SCE68.03;locus_tag=SCO3305
NC_003888.3	RefSeq	CDS	3656071	3657396	.	+	0	ID=cds3263;Parent=gene3327;Dbxref=Genbank:NP_627515.1,GeneID:1098739;Name=NP_627515.1;Note=SCE68.03%2C possible membrane protein%2C len: 441 aa%3B unknown function%2C weakly similar to TR:O66257 (EMBL:AB010415) Actinobacillus actinomycetemcomitans integral membrane acetyltransferase (344 aa)%2C fasta scores%3B opt: 259 z-score: 247.1 E(): 1.9e-06%2C 24.2%25 identity in 360 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCE68.03;product=acyltransferase;protein_id=NP_627515.1;transl_table=11
NC_003888.3	RefSeq	gene	3657329	3658543	.	-	.	ID=gene3328;Dbxref=GeneID:1098740;Name=SCE68.04c;gbkey=Gene;gene=SCE68.04c;gene_biotype=protein_coding;gene_synonym=SCE68.04c;locus_tag=SCO3306
NC_003888.3	RefSeq	CDS	3657329	3658543	.	-	0	ID=cds3264;Parent=gene3328;Dbxref=Genbank:NP_627516.1,GeneID:1098740;Name=NP_627516.1;Note=SCE68.04c%2C possible aminotransferase%2C len: 404 aa%3B similar to TR:Q56232 (EMBL:D38459)%2C aspC%2C Thermus aquaticus aspartate aminotransferase (385 aa)%2C fasta scores%3B opt: 379 z-score: 433.6 E(): 7.9e-17%2C 28.9%25 identity in 370 aa overlap and to many hypothetical aminotransferases. Similar to many from S.coelicolor e.g. SCH10.36 (EMBL:AL049754) probable aspartate aminotransferase (396 aa) (33.2%25 identity in 404 aa overlap). Alternative start codons are present at codons 3 and 7. Contains Pfam match to entry PF00155 aminotran_1%2C Aminotransferases class-I;gbkey=CDS;gene=SCE68.04c;product=aminotransferase;protein_id=NP_627516.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3657335	3658504	.	-	.	ID=id4168;Dbxref=GeneID:1098740;Note=Pfam match to entry PF00155 aminotran_1%2C Aminotransferases class-I%2C score 25.10%2C E-value 6.9e-12;gbkey=misc_feature;gene=SCE68.04c
NC_003888.3	RefSeq	gene	3658635	3659537	.	-	.	ID=gene3329;Dbxref=GeneID:1098741;Name=SCE68.05c;gbkey=Gene;gene=SCE68.05c;gene_biotype=protein_coding;gene_synonym=SCE68.05c;locus_tag=SCO3307
NC_003888.3	RefSeq	CDS	3658635	3659537	.	-	0	ID=cds3265;Parent=gene3329;Dbxref=Genbank:NP_627517.1,GeneID:1098741;Name=NP_627517.1;Note=SCE68.05c%2C conserved hypothetical protein%2C len: 300 aa%3B unknown function%2C similar to others from S.coelicolor e.g. TR:O86541 (EMBL:AL031350)%2C SC1F3.04%2C hypothetical protein (261 aa)%2C fasta scores%3B opt: 791 z-score: 916.0 E(): 0%2C 48.9%25 identity in 262 aa overlap;gbkey=CDS;gene=SCE68.05c;product=hypothetical protein;protein_id=NP_627517.1;transl_table=11
NC_003888.3	RefSeq	gene	3659641	3661035	.	-	.	ID=gene3330;Dbxref=GeneID:1098742;Name=SCE68.06c;gbkey=Gene;gene=SCE68.06c;gene_biotype=protein_coding;gene_synonym=SCE68.06c;locus_tag=SCO3308
NC_003888.3	RefSeq	CDS	3659641	3661035	.	-	0	ID=cds3266;Parent=gene3330;Dbxref=Genbank:NP_627518.1,GeneID:1098742;Name=NP_627518.1;Note=SCE68.06c%2C probable DNA-binding protein%2C len: 464 aa%3B similar to TR:Q9AK04 (EMBL:AL512944) Streptomyces coelicolor hypothetical protein SC8D11.15c%2C 471 aa%3B fasta scores: opt: 428 Z-score: 331.6 E(): 7.7e-11%3B 40.377%25 identity in 478 aa overlap%3B probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains a hydrophobic%2C possible membrane-spanning region%2C followed by a low-complexity proline- and serine-rich region from aa 210 to 250 approx. Contains probable helix-turn-helix motif at aa 20-41 (Score 1605%2C +4.65 SD);gbkey=CDS;gene=SCE68.06c;product=DNA-binding protein;protein_id=NP_627518.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3661040	3661044	.	-	.	ID=id4169;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3661178	3661555	.	-	.	ID=gene3331;Dbxref=GeneID:1098743;Name=SCE68.07c;gbkey=Gene;gene=SCE68.07c;gene_biotype=protein_coding;gene_synonym=SCE68.07c;locus_tag=SCO3309
NC_003888.3	RefSeq	CDS	3661178	3661555	.	-	0	ID=cds3267;Parent=gene3331;Dbxref=Genbank:NP_627519.1,GeneID:1098743;Name=NP_627519.1;Note=SCE68.07c%2C hypothetical protein%2C len: 125 aa%3B unknown function%2C probable CDS suggested by GC frame analysis and amino acid composition;gbkey=CDS;gene=SCE68.07c;product=hypothetical protein;protein_id=NP_627519.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3661476	3663631	.	-	.	ID=id4170;Note=sequence corresponding to EMBL:U19249;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	3661571	3661574	.	-	.	ID=id4171;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3661737	3661991	.	+	.	ID=gene3332;Dbxref=GeneID:1098744;Name=SCE68.08;gbkey=Gene;gene=SCE68.08;gene_biotype=protein_coding;gene_synonym=SCE68.08;locus_tag=SCO3310
NC_003888.3	RefSeq	CDS	3661737	3661991	.	+	0	ID=cds3268;Parent=gene3332;Dbxref=Genbank:NP_627520.1,GeneID:1098744;Name=NP_627520.1;Note=SCE68.08%2C hypothetical protein%2C len: 84 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCE68.08;product=hypothetical protein;protein_id=NP_627520.1;transl_table=11
NC_003888.3	RefSeq	gene	3662050	3663042	.	-	.	ID=gene3333;Dbxref=GeneID:1098745;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;gene_synonym=hemB,SCE68.09c;locus_tag=SCO3311
NC_003888.3	RefSeq	CDS	3662050	3663042	.	-	0	ID=cds3269;Parent=gene3333;Dbxref=Genbank:NP_627521.1,GeneID:1098745;Name=NP_627521.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;gene=hemB;product=delta-aminolevulinic acid dehydratase;protein_id=NP_627521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3662077	3662982	.	-	.	ID=id4172;Dbxref=GeneID:1098745;Note=Pfam match to entry PF00490 ALAD%2C Delta-aminolevulinic acid dehydratase%2C score 626.50%2C E-value 1.5e-184;gbkey=misc_feature;gene=hemB
NC_003888.3	RefSeq	sequence_feature	3662263	3662301	.	-	.	ID=id4173;Dbxref=GeneID:1098745;Note=PS00169 Delta-aminolevulinic acid dehydratase active site;gbkey=misc_feature;gene=hemB
NC_003888.3	RefSeq	gene	3663566	3663976	.	+	.	ID=gene3334;Dbxref=GeneID:1098746;Name=SCE68.10;gbkey=Gene;gene=SCE68.10;gene_biotype=protein_coding;gene_synonym=SCE68.10;locus_tag=SCO3312
NC_003888.3	RefSeq	CDS	3663566	3663976	.	+	0	ID=cds3270;Parent=gene3334;Dbxref=Genbank:NP_627522.1,GeneID:1098746;Name=NP_627522.1;Note=SCE68.10%2C hypothetical protein%2C len: 136 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Similar to TRNEW:CAC46514 (EMBL:AL591789) hypothetical protein SMC04265 from Rhizobium meliloti (Sinorhizobium meliloti) (147 aa) fasta scores%3B opt: 380%2C Z-score: 458.7%2C E(): 6.5e-18%2C 46.875%25 identity (47.244%25 ungapped) in 128 aa overlap.;gbkey=CDS;gene=SCE68.10;product=hypothetical protein;protein_id=NP_627522.1;transl_table=11
NC_003888.3	RefSeq	gene	3663973	3664890	.	-	.	ID=gene3335;Dbxref=GeneID:1098747;Name=SCE68.11;gbkey=Gene;gene=SCE68.11;gene_biotype=protein_coding;gene_synonym=SCE68.11;locus_tag=SCO3313
NC_003888.3	RefSeq	CDS	3663973	3664890	.	-	0	ID=cds3271;Parent=gene3335;Dbxref=Genbank:NP_627523.1,GeneID:1098747;Name=NP_627523.1;Note=SCE68.11c%2C conserved hypothetical protein%2C len: 305 aa%3B unknown function%2C N-terminal half similar to hypothetical proteins from Mycobacterium tuberculosis%2C Mycobacterium paratuberculosis and Streptomyces lividans%2C e.g. SW:Y08L_MYCTU (EMBL:Z77137) Mycobacterium tuberculosis hypothetical protein (149 aa)%2C fasta scores%3B opt: 297 z-score: 354.1 E(): 2.1e-12%2C 42.7%25 identity in 124 aa overlap;gbkey=CDS;gene=SCE68.11;product=hypothetical protein;protein_id=NP_627523.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3664902	3664906	.	-	.	ID=id4174;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3665180	3666136	.	-	.	ID=gene3336;Dbxref=GeneID:1098748;Name=SCE68.12c;gbkey=Gene;gene=SCE68.12c;gene_biotype=protein_coding;gene_synonym=SCE68.12c;locus_tag=SCO3314
NC_003888.3	RefSeq	CDS	3665180	3666136	.	-	0	ID=cds3272;Parent=gene3336;Dbxref=Genbank:NP_627524.1,GeneID:1098748;Name=NP_627524.1;Note=SCE68.12c%2C possible dehydrogenase%2C len: 318 aa%3B weakly similar to SW:QOR_CAVPO (EMBL:M26936) Cavia porcellus quinone oxidoreductase (329 aa)%2C fasta scores%3B opt: 301 z-score: 320.4 E(): 1.6e-10%2C 27.6%25 identity in 326 aa overlap. Similar to TR:Q53927 (EMBL:X62373) ORF2 from S.coelicolor actVI locus (329 aa) (33.7%25 identity in 329 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SCE68.12c;product=dehydrogenase;protein_id=NP_627524.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3665189	3666109	.	-	.	ID=id4175;Dbxref=GeneID:1098748;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 5.70%2C E-value 1.3e-09;gbkey=misc_feature;gene=SCE68.12c
NC_003888.3	RefSeq	gene	3666265	3666957	.	+	.	ID=gene3337;Dbxref=GeneID:1098749;Name=SCE68.13;gbkey=Gene;gene=SCE68.13;gene_biotype=protein_coding;gene_synonym=SCE68.13;locus_tag=SCO3315
NC_003888.3	RefSeq	CDS	3666265	3666957	.	+	0	ID=cds3273;Parent=gene3337;Dbxref=Genbank:NP_627525.1,GeneID:1098749;Name=NP_627525.1;Note=SCE68.13%2C probable transcriptional regulator%2C len: 230 aa%3B similar to TR:O53612 (EMBL:AL021428) Mycobacterium tuberculosis  transcriptional regulator (189 aa)%2C fasta scores%3B opt: 315 z-score: 346.2 E(): 5.8e-12%2C 35.5%25 identity in 172 aa overlap. Weak similarity to TR:O54180 (EMBL:AL021411)%2C SC7H1.22%2C S.coelicolor probable transcriptional regulator (203 aa) (34.4%25 identity in 154 aa overlap). Contains probable helix-turn-helix motif at aa 50-71 (Score 1594%2C +4.62 SD). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family (weak match);gbkey=CDS;gene=SCE68.13;product=transcriptional regulator;protein_id=NP_627525.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3666364	3666501	.	+	.	ID=id4176;Dbxref=GeneID:1098749;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 21.00%2C E-value 0.00045;gbkey=misc_feature;gene=SCE68.13
NC_003888.3	RefSeq	gene	3666980	3667756	.	-	.	ID=gene3338;Dbxref=GeneID:1098750;Name=SCE68.14c;gbkey=Gene;gene=SCE68.14c;gene_biotype=protein_coding;gene_synonym=SCE68.14c;locus_tag=SCO3316
NC_003888.3	RefSeq	CDS	3666980	3667756	.	-	0	ID=cds3274;Parent=gene3338;Dbxref=Genbank:NP_627526.1,GeneID:1098750;Name=NP_627526.1;Note=SCE68.14c%2C probable dehydrogenase%2C len: 258 aa%3B similar to many e.g. SW:DHG3_BACME (EMBL:D10625)%2C gdhIII%2C Bacillus megaterium glucose 1-dehydrogenase III (261 aa)%2C fasta scores%3B opt: 424 z-score: 446.0 E(): 1.6e-17%2C32.4%25 identity in 253 aa overlap. Similar to many others from S.coelicolor e.g. TR:O88068 (EMBL:AL031541)%2C SCI35.33c%2C probable dehydrogenase (260 aa) (33.5%25 identity in 254 aa overlap). Contains Pfam matches to entry PF00106 adh_short%2C short chain dehydrogenase and entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus. Contains PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCE68.14c;product=dehydrogenase;protein_id=NP_627526.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3667019	3667111	.	-	.	ID=id4177;Dbxref=GeneID:1098750;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 46.70%2C E-value 5.2e-10;gbkey=misc_feature;gene=SCE68.14c
NC_003888.3	RefSeq	sequence_feature	3667157	3667726	.	-	.	ID=id4178;Dbxref=GeneID:1098750;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 156.10%2C E-value 6.1e-43;gbkey=misc_feature;gene=SCE68.14c
NC_003888.3	RefSeq	sequence_feature	3667220	3667306	.	-	.	ID=id4179;Dbxref=GeneID:1098750;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCE68.14c
NC_003888.3	RefSeq	ribosome_entry_site	3667761	3667765	.	-	.	ID=id4180;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	3667922	3668077	.	+	.	ID=id4181;Note=stem is 26/28 bp (92%25) matches%2C 0 gaps%3B loop is 100 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3668023	3669720	.	-	.	ID=gene3339;Dbxref=GeneID:1098751;Name=SCE68.15c;gbkey=Gene;gene=SCE68.15c;gene_biotype=protein_coding;gene_synonym=SCE68.15c;locus_tag=SCO3317
NC_003888.3	RefSeq	CDS	3668023	3669720	.	-	0	ID=cds3275;Parent=gene3339;Dbxref=Genbank:NP_627527.1,GeneID:1098751;Name=NP_627527.1;Note=SCE68.15c%2C possible uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase%2C len: 565 aa%3B similar to many e.g. SW:HEM4_CLOJO (EMBL:D28503)%2C hemD%2C Clostridium josui porphyrin biosynthesis probable bifunctional protein (504 aa)%2C fasta scores%3B opt: 519 z-score: 562.5 E(): 5.2e-24%2C 29.8%25 identity in 533 aa overlap. The C-terminal half is similar to the monofunctional SW:HEM4_SYNP7 (EMBL:X70966) Synechococcus sp. uroporphyrinogen-III synthase (264 aa) (29.7%25 identity in 263 aa overlap). May be involved in cysteine biosynthesis and/or porphyrin biosynthesis. Contains Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases and PS00839 Uroporphyrin-III C-methyltransferase signature 1;gbkey=CDS;gene=SCE68.15c;product=uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase;protein_id=NP_627527.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3669004	3669681	.	-	.	ID=id4182;Dbxref=GeneID:1098751;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score 105.40%2C E-value 1.1e-27;gbkey=misc_feature;gene=SCE68.15c
NC_003888.3	RefSeq	sequence_feature	3669625	3669669	.	-	.	ID=id4183;Dbxref=GeneID:1098751;Note=PS00839 Uroporphyrin-III C-methyltransferase signature 1;gbkey=misc_feature;gene=SCE68.15c
NC_003888.3	RefSeq	gene	3669717	3670676	.	-	.	ID=gene3340;Dbxref=GeneID:1098752;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;gene_synonym=SCE68.16c;locus_tag=SCO3318
NC_003888.3	RefSeq	CDS	3669717	3670676	.	-	0	ID=cds3276;Parent=gene3340;Dbxref=Genbank:NP_627528.1,GeneID:1098752;Name=NP_627528.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=NP_627528.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3669756	3670661	.	-	.	ID=id4184;Dbxref=GeneID:1098752;Note=Pfam match to entry PF01379 Porphobil_deam%2C Porphobilinogen deaminase%2C score 352.60%2C E-value 4.2e-102;gbkey=misc_feature;gene=hemC
NC_003888.3	RefSeq	gene	3670673	3672418	.	-	.	ID=gene3341;Dbxref=GeneID:1098753;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;gene_synonym=SCE68.17c;locus_tag=SCO3319
NC_003888.3	RefSeq	CDS	3670673	3672418	.	-	0	ID=cds3277;Parent=gene3341;Dbxref=Genbank:NP_627529.1,GeneID:1098753;Name=NP_627529.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=NP_627529.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3670739	3672313	.	-	.	ID=id4185;Dbxref=GeneID:1098753;Note=Pfam match to entry PF00745 GlutR%2C Glutaminyl-tRNA reductase%2C score 236.80%2C E-value 3.1e-67;gbkey=misc_feature;gene=hemA
NC_003888.3	RefSeq	sequence_feature	3672053	3672124	.	-	.	ID=id4186;Dbxref=GeneID:1098753;Note=PS00747 Glutamyl-tRNA reductase signature;gbkey=misc_feature;gene=hemA
NC_003888.3	RefSeq	gene	3672415	3673191	.	-	.	ID=gene3342;Dbxref=GeneID:1098754;Name=SCE68.18c;gbkey=Gene;gene=SCE68.18c;gene_biotype=protein_coding;gene_synonym=SCE68.18c;locus_tag=SCO3320
NC_003888.3	RefSeq	CDS	3672415	3673191	.	-	0	ID=cds3278;Parent=gene3342;Dbxref=Genbank:NP_627530.1,GeneID:1098754;Name=NP_627530.1;Note=modulates transcription in response to the NADH/NAD(+) redox state;gbkey=CDS;gene=SCE68.18c;product=redox-sensing transcriptional repressor Rex;protein_id=NP_627530.1;transl_table=11
NC_003888.3	RefSeq	gene	3673466	3673771	.	-	.	ID=gene3343;Dbxref=GeneID:1098755;Name=SCE68.19c;gbkey=Gene;gene=SCE68.19c;gene_biotype=protein_coding;gene_synonym=SCE68.19c;locus_tag=SCO3321
NC_003888.3	RefSeq	CDS	3673466	3673771	.	-	0	ID=cds3279;Parent=gene3343;Dbxref=Genbank:NP_627531.1,GeneID:1098755;Name=NP_627531.1;Note=SCE68.19c%2C possible redoxin%2C len: 101 aa%3B similar to TR:O69271 (EMBL:Y09572)%2C NrdH%2C Corynebacterium ammoniagenes NrdH-redoxin from a ribonucleotide reductase operon (75 aa)%2C fasta scores%3B opt: 96 z-score: 145.6 E(): 0.88%2C 27.6%25 identity in 76 aa overlap. Also similar to SW:YV35_MYCTU (EMBL:Z77162) Mycobacterium tuberculosis hypothetical protein (97 aa) (33.3%25 identity in 75 aa overlap). Cys32 and Cys35 are conserved in similar proteins;gbkey=CDS;gene=SCE68.19c;product=redoxin;protein_id=NP_627531.1;transl_table=11
NC_003888.3	RefSeq	gene	3673970	3674866	.	+	.	ID=gene3344;Dbxref=GeneID:1098756;Name=SCE68.20;gbkey=Gene;gene=SCE68.20;gene_biotype=protein_coding;gene_synonym=SCE68.20;locus_tag=SCO3322
NC_003888.3	RefSeq	CDS	3673970	3674866	.	+	0	ID=cds3280;Parent=gene3344;Dbxref=Genbank:NP_627532.1,GeneID:1098756;Name=NP_627532.1;Note=SCE68.20%2C membrane protein%2C len: 298 aa%3B unknown function%2C similar to TR:O33611 (EMBL:AB004855) Streptomyces cyaneus hypothetical protein (277 aa)%2C fasta scores%3B opt: 463 z-score: 536.3 E(): 1.5e-22%2C 34.2%25 identity in 269 aa overlap. C-terminus similar to other hypothetical proteins e.g. SW:YV32_MYCTU (EMBL:Z77162) from Mycobacterium tuberculosis (373 aa) (57.8%25 identity in 256 aa overlap) and SCH5.21 (EMBL:AL035636) S.coelicolor hypothetical protein (268 aa) (36.3%25 identity in 267 aa overlap). Contains possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=SCE68.20;product=hypothetical protein;protein_id=NP_627532.1;transl_table=11
NC_003888.3	RefSeq	gene	3675442	3675975	.	+	.	ID=gene3345;Dbxref=GeneID:1098757;Name=SCE68.21;gbkey=Gene;gene=SCE68.21;gene_biotype=protein_coding;gene_synonym=SCE68.21;locus_tag=SCO3323
NC_003888.3	RefSeq	CDS	3675442	3675975	.	+	0	ID=cds3281;Parent=gene3345;Dbxref=Genbank:NP_627533.1,GeneID:1098757;Name=NP_627533.1;Note=SCE68.21%2C probable RNA polymerase sigma factor%2C len: 177 aa%3B similar to many members of the extracytoplasmic function sigma factor family e.g. SW:CARQ_MYXXA (EMBL:X71062)%2C CarQ%2C Myxococcus xanthus RNA polymerase sigma factor (174 aa)%2C fasta scores%3B opt: 237 z-score: 281.3 E(): 2.4e-08%2C 32.0%25 identity in 169 aa overlap. Similar to others from S. coelicolor e.g. TR:O54163 (EMBL:AL021411)%2C SC7H1.04%2C possible sigma factor (200 aa) (30.8%25 identity in 172 aa overlap). Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=SCE68.21;product=RNA polymerase sigma factor;protein_id=NP_627533.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3675523	3675729	.	+	.	ID=id4187;Dbxref=GeneID:1098757;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 52.70%2C E-value 8.2e-12;gbkey=misc_feature;gene=SCE68.21
NC_003888.3	RefSeq	ribosome_entry_site	3676208	3676211	.	+	.	ID=id4188;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3676214	3677473	.	+	.	ID=gene3346;Dbxref=GeneID:1098758;Name=SCE68.22;gbkey=Gene;gene=SCE68.22;gene_biotype=protein_coding;gene_synonym=SCE68.22;locus_tag=SCO3324
NC_003888.3	RefSeq	CDS	3676214	3677473	.	+	0	ID=cds3282;Parent=gene3346;Dbxref=Genbank:NP_627534.1,GeneID:1098758;Name=NP_627534.1;Note=SCE68.22%2C hypothetical protein%2C len: 419 aa%3B unknown function%2C probable serine-rich CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. An alternative start codon is present at codon 4;gbkey=CDS;gene=SCE68.22;product=hypothetical protein;protein_id=NP_627534.1;transl_table=11
NC_003888.3	RefSeq	gene	3677515	3678582	.	-	.	ID=gene3347;Dbxref=GeneID:1098759;Name=SCE68.23c;gbkey=Gene;gene=SCE68.23c;gene_biotype=protein_coding;gene_synonym=SCE68.23c;locus_tag=SCO3325
NC_003888.3	RefSeq	CDS	3677515	3678582	.	-	0	ID=cds3283;Parent=gene3347;Dbxref=Genbank:NP_627535.1,GeneID:1098759;Name=NP_627535.1;Note=SCE68.23c%2C conserved hypothetical protein%2C len: 355 aa%3B similar to hypothetical proteins from Mycobacterium tuberculosis and Mycobacterium leprae e.g. SW:YV29_MYCTU (EMBL:Z77162) Mycobacterium tuberculosis hypothetical protein (358 aa)%2C fasta scores%3B opt: 1281 z-score: 1288.1 E(): 0%2C 56.5%25 identity in 356 aa overlap. Similar to TR:O54097 (EMBL:AL021529)%2C SC10A5.04%2C S.coelicolor hypothetical protein (295 aa) (64.4%25 identity in 278 aa overlap);gbkey=CDS;gene=SCE68.23c;product=hypothetical protein;protein_id=NP_627535.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3678594	3678598	.	-	.	ID=id4189;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3678597	3679658	.	-	.	ID=gene3348;Dbxref=GeneID:1098760;Name=SCE68.24c;gbkey=Gene;gene=SCE68.24c;gene_biotype=protein_coding;gene_synonym=SCE68.24c;locus_tag=SCO3326
NC_003888.3	RefSeq	CDS	3678597	3679658	.	-	0	ID=cds3284;Parent=gene3348;Dbxref=Genbank:NP_627536.1,GeneID:1098760;Name=NP_627536.1;Note=SCE68.24c%2C possible epimerase%2C len: 353 aa%3B similar to many e.g. SW:GALE_SALT (EMBL:M33681)%2C galE%2C Salmonella typhimurium UDP-glucose 4-epimerase (337 aa)%2C fasta scores%3B opt: 209 z-score: 250.6 E(): 1.2e-06%2C 32.1%25 identity in 193 aa overlap. Similar to hypothetical proteins from Mycobacterium tuberculosis and Mycobacterium leprae e.g. SW:YV28_MYCTU (EMBL:Z77162) Mycobacterium tuberculosis UDP-glucose 4-epimerase (376 aa) (45.0%25 identity in 353 aa overlap). N-terminal half weakly similar to the corresponding region of TR:O54156 (EMBL:AL021409)%2C SC3F7.13%2C S.coelicolor probable oxidoreductase (347 aa) (29.8%25 identity in 181 aa overlap);gbkey=CDS;gene=SCE68.24c;product=epimerase;protein_id=NP_627536.1;transl_table=11
NC_003888.3	RefSeq	gene	3679848	3679946	.	-	.	ID=gene3349;Dbxref=GeneID:1098761;Name=SCE68.25c;gbkey=Gene;gene=SCE68.25c;gene_biotype=protein_coding;gene_synonym=SCE68.25c;locus_tag=SCO3327
NC_003888.3	RefSeq	CDS	3679848	3679946	.	-	0	ID=cds3285;Parent=gene3349;Dbxref=Genbank:NP_627537.1,GeneID:1098761;Name=NP_627537.1;Note=SCE68.25c%2C hypothetical protein%2C len: 32 aa%3B unknown function%2C possible small%2C lysine-rich protein suggested by GC frameplot;gbkey=CDS;gene=SCE68.25c;product=hypothetical protein;protein_id=NP_627537.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3679953	3679956	.	-	.	ID=id4190;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3680056	3680268	.	-	.	ID=gene3350;Dbxref=GeneID:1098762;Name=SCE68.26c;gbkey=Gene;gene=SCE68.26c;gene_biotype=protein_coding;gene_synonym=SCE68.26c;locus_tag=SCO3328
NC_003888.3	RefSeq	CDS	3680056	3680268	.	-	0	ID=cds3286;Parent=gene3350;Dbxref=Genbank:NP_627538.1,GeneID:1098762;Name=NP_627538.1;Note=SCE68.26c%2C hypothetical protein%2C len: 70 aa%3B similar to TR:Q49828 (EMBL:U00018) Mycobacterium leprae hypothetical protein (86 aa)%2C fasta scores%3B opt: 269 z-score: 380.5 E(): 7.2e-14%2C 68.3%25 identity in 63 aa overlap. Weakly similar to excisionases e.g. TR:Q54076 (EMBL:L11597)%2C xis%2C Saccharopolyspora erythraea excisionase (76 aa) (34.0%25 identity in 47 aa overlap) and SCE29.20c (EMBL:AL035707) S.coelicolor probable excisionase (66 aa) (33.3%25 identity in 48 aa overlap). Contains probable helix-turn-helix motif at aa 16-37 (Score 1251%2C +3.45 SD);gbkey=CDS;gene=SCE68.26c;product=hypothetical protein;protein_id=NP_627538.1;transl_table=11
NC_003888.3	RefSeq	gene	3680398	3681213	.	-	.	ID=gene3351;Dbxref=GeneID:1098763;Name=SCE68.27c;gbkey=Gene;gene=SCE68.27c;gene_biotype=protein_coding;gene_synonym=SCE68.27c;locus_tag=SCO3329
NC_003888.3	RefSeq	CDS	3680398	3681213	.	-	0	ID=cds3287;Parent=gene3351;Dbxref=Genbank:NP_627539.1,GeneID:1098763;Name=NP_627539.1;Note=SCE68.27c%2C hypothetical protein%2C len: 271 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis%2C amino acid composition and possible RBS. The start codon is uncertain%2C alternatives being present at codons 19%2C 20 and 26;gbkey=CDS;gene=SCE68.27c;product=hypothetical protein;protein_id=NP_627539.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3681215	3681219	.	-	.	ID=id4191;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3681507	3682610	.	-	.	ID=gene3352;Dbxref=GeneID:1098764;Name=SCE68.28c;gbkey=Gene;gene=SCE68.28c;gene_biotype=protein_coding;gene_synonym=SCE68.28c;locus_tag=SCO3330
NC_003888.3	RefSeq	CDS	3681507	3682610	.	-	0	ID=cds3288;Parent=gene3352;Dbxref=Genbank:NP_627540.1,GeneID:1098764;Name=NP_627540.1;Note=SCE68.28c%2C probable acetoin utilization protein%2C len: 367 aa%3B similar to proteins known to be required for growth on acetoin and 2%2C3-butanediol in Bacillus subtilis and Staphylococcus xylosus e.g. SW:ACUC_BACSU (EMBL:L17309)%2C AcuC%2C Bacillus subtilis acetoin utilization protein (387 aa)%2C fasta scores%3B opt: 910 z-score: 1032.3 E(): 0%2C 43.5%25 identity in 315 aa overlap. Similar to many histone deacetylases e.g. SW:RPD3_YEAST (EMBL:S66438)%2C Rpd3%2C Saccharomyces cerevisiae histone deacetylases (433 aa) (32.0%25 identity in 338 aa overlap). Contains Pfam match to entry PF00850 Hist_deacetyl%2C Histone deacetylase family;gbkey=CDS;gene=SCE68.28c;product=acetoin utilization protein;protein_id=NP_627540.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3681720	3682610	.	-	.	ID=id4192;Dbxref=GeneID:1098764;Note=Pfam match to entry PF00850 Hist_deacetyl%2C Histone deacetylase family%2C score 305.80%2C E-value 5.2e-88;gbkey=misc_feature;gene=SCE68.28c
NC_003888.3	RefSeq	gene	3682630	3683877	.	-	.	ID=gene3353;Dbxref=GeneID:1098765;Name=SCE68.29c;gbkey=Gene;gene=SCE68.29c;gene_biotype=protein_coding;gene_synonym=SCE68.29c;locus_tag=SCO3331
NC_003888.3	RefSeq	CDS	3682630	3683877	.	-	0	ID=cds3289;Parent=gene3353;Dbxref=Genbank:NP_627541.1,GeneID:1098765;Name=NP_627541.1;Note=SCE68.29c%2C possible transmembrane transport protein%2C len: 415 aa%3B similar to many e.g. TR:O30996 (EMBL:AF024666)%2C cmx%2C Corynebacterium striatum R-plasmid pTP10 transposon Tn5564 chloramphenicol export protein (391 aa)%2C fasta scores%3B opt: 215 z-score: 235.6 E(): 8.4e-06%2C 24.4%25 identity in 390 aa overlap. Similar to TR:O69867 (EMBL:AL023702)%2C SC1C3.25%2C S.coelicolor transmembrane transport protein (410 aa) (32.1%25 identity in 383 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCE68.29c;product=transmembrane transport protein;protein_id=NP_627541.1;transl_table=11
NC_003888.3	RefSeq	gene	3683901	3684617	.	-	.	ID=gene3354;Dbxref=GeneID:1098766;Name=SCE68.30c;gbkey=Gene;gene=SCE68.30c;gene_biotype=protein_coding;gene_synonym=SCE68.30c;locus_tag=SCO3332
NC_003888.3	RefSeq	CDS	3683901	3684617	.	-	0	ID=cds3290;Parent=gene3354;Dbxref=Genbank:NP_627542.1,GeneID:1098766;Name=NP_627542.1;Note=SCE68.30c%2C possible membrane protein%2C len: 238 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains hydrophobic%2C possible membrane-spanning regions. Alternative start codons are present at codons 10 and 11.;gbkey=CDS;gene=SCE68.30c;product=hypothetical protein;protein_id=NP_627542.1;transl_table=11
NC_003888.3	RefSeq	gene	3684694	3685341	.	-	.	ID=gene3355;Dbxref=GeneID:1098767;Name=SCE68.31c;gbkey=Gene;gene=SCE68.31c;gene_biotype=protein_coding;gene_synonym=SCE68.31c;locus_tag=SCO3333
NC_003888.3	RefSeq	CDS	3684694	3685341	.	-	0	ID=cds3291;Parent=gene3355;Dbxref=Genbank:NP_627543.1,GeneID:1098767;Name=NP_627543.1;Note=SCE68.31c%2C possible hydrolase%2C len: 215 aa%3B similar to many e.g. TR:O68118 (EMBL:AF010496) Rhodobacter capsulatus hypothetical protein (225 aa)%2C fasta scores%3B opt: 456 z-score: 540.0 E(): 9.4e-23%2C 38.5%25 identity in 221 aa overlap. Weakly similar to SW:GPH_RHOCA (EMBL:U23145)%2C cbbZ%2C Rhodobacter capsulatus phosphoglycolate phosphatase (219 aa) (24.0%25 identity in 217 aa overlap). Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=SCE68.31c;product=hydrolase;protein_id=NP_627543.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3684772	3685335	.	-	.	ID=id4193;Dbxref=GeneID:1098767;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 112.90%2C E-value 6.1e-30;gbkey=misc_feature;gene=SCE68.31c
NC_003888.3	RefSeq	stem_loop	3685364	3685389	.	-	.	ID=id4194;Note=stem is 11 bp perfect match%3B loop is 4 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3685404	3685522	.	-	.	ID=gene3356;Dbxref=GeneID:1098768;Name=rrnF;gbkey=Gene;gene=rrnF;gene_biotype=rRNA;locus_tag=SCOr10
NC_003888.3	RefSeq	rRNA	3685404	3685522	.	-	.	ID=rna38;Parent=gene3356;Dbxref=GeneID:1098768;Note=probable 5S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 5S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnF;product=5S ribosomal RNA
NC_003888.3	RefSeq	exon	3685404	3685522	.	-	.	ID=id4195;Parent=rna38;Dbxref=GeneID:1098768;Note=probable 5S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 5S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnF;product=5S ribosomal RNA
NC_003888.3	RefSeq	gene	3685606	3688729	.	-	.	ID=gene3357;Dbxref=GeneID:1098769;Name=rrnF;gbkey=Gene;gene=rrnF;gene_biotype=rRNA;locus_tag=SCOr11
NC_003888.3	RefSeq	rRNA	3685606	3688729	.	-	.	ID=rna39;Parent=gene3357;Dbxref=GeneID:1098769;Note=probable 23S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 23S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnF;product=23S ribosomal RNA
NC_003888.3	RefSeq	exon	3685606	3688729	.	-	.	ID=id4196;Parent=rna39;Dbxref=GeneID:1098769;Note=probable 23S rRNA%2C coordinates taken from similarity to Streptomyces rimosus 23S rRNA gene of the rrnF gene set (EMBL:X62884);gbkey=rRNA;gene=rrnF;product=23S ribosomal RNA
NC_003888.3	RefSeq	gene	3689010	3690537	.	-	.	ID=gene3358;Dbxref=GeneID:1098770;Name=rrnF;gbkey=Gene;gene=rrnF;gene_biotype=rRNA;locus_tag=SCOr12
NC_003888.3	RefSeq	rRNA	3689010	3690537	.	-	.	ID=rna40;Parent=gene3358;Dbxref=GeneID:1098770;Note=probable 16S rRNA%2C coordinates taken from similarity to Streptomyces coelicolor 16S rRNA gene of the rrnD gene set (EMBL:Y00411);gbkey=rRNA;gene=rrnF;product=16S ribosomal RNA
NC_003888.3	RefSeq	exon	3689010	3690537	.	-	.	ID=id4197;Parent=rna40;Dbxref=GeneID:1098770;Note=probable 16S rRNA%2C coordinates taken from similarity to Streptomyces coelicolor 16S rRNA gene of the rrnD gene set (EMBL:Y00411);gbkey=rRNA;gene=rrnF;product=16S ribosomal RNA
NC_003888.3	RefSeq	gene	3691374	3692384	.	+	.	ID=gene3359;Dbxref=GeneID:1098771;Name=SCE68.32;gbkey=Gene;gene=SCE68.32;gene_biotype=protein_coding;gene_synonym=SCE68.32,SCE7.01,trpS;locus_tag=SCO3334
NC_003888.3	RefSeq	CDS	3691374	3692384	.	+	0	ID=cds3292;Parent=gene3359;Dbxref=Genbank:NP_733600.1,GeneID:1098771;Name=NP_733600.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=SCE68.32;product=tryptophanyl-tRNA synthetase;protein_id=NP_733600.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3691401	3691430	.	+	.	ID=id4198;Dbxref=GeneID:1098771;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=SCE68.32
NC_003888.3	RefSeq	gene	3692339	3693343	.	-	.	ID=gene3360;Dbxref=GeneID:1098772;Name=SCE7.02c;gbkey=Gene;gene=SCE7.02c;gene_biotype=protein_coding;gene_synonym=SCE7.02c;locus_tag=SCO3335
NC_003888.3	RefSeq	CDS	3692339	3693343	.	-	0	ID=cds3293;Parent=gene3360;Dbxref=Genbank:NP_627544.1,GeneID:1098772;Name=NP_627544.1;Note=SCE7.02c%2C probable AraC-family transcriptional regulator%2C len: 334 aa%3B similar to many e.g. TR:CAB40696 (EMBL:AL049587)  transcriptional regulator (325 aa) fasta scores%3B opt: 643%2C z-score: 750.6%2C E(): 0%2C (39.9%25 identity in 316 aa overlap) and TR:O30507 (EMBL:AF008308) from Pseudomonas aeruginosa (328 aa) fasta scores%3B opt: 360%2C z-score: 423.1%2C E(): 3e-16%2C (27.7%25 identity in 328 aa overlap). Contains Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family. Also contains probable helix-turn-helix motif (+4.06 SD) at 241-262aa.;gbkey=CDS;gene=SCE7.02c;product=AraC family transcription regulator;protein_id=NP_627544.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3692369	3692629	.	-	.	ID=id4199;Dbxref=GeneID:1098772;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 76.20%2C E-value 6.7e-19.;gbkey=misc_feature;gene=SCE7.02c
NC_003888.3	RefSeq	gene	3693418	3693999	.	+	.	ID=gene3361;Dbxref=GeneID:1098773;Name=SCE7.03;gbkey=Gene;gene=SCE7.03;gene_biotype=protein_coding;gene_synonym=SCE7.03;locus_tag=SCO3336
NC_003888.3	RefSeq	CDS	3693418	3693999	.	+	0	ID=cds3294;Parent=gene3361;Dbxref=Genbank:NP_627545.1,GeneID:1098773;Name=NP_627545.1;Note=SCE7.03%2C possible hydrolase%2C len: 193aa%3B similar to many egs. TR:O07081 (EMBL:U93876) hypothetical protein from Bacillus subtilis (187 aa) fasta scores%3B opt: 370%2C z-score: 455.2%2C E(): 5e-18%2C (35.1%25 identity in 188 aa overlap) and SW:ENTB_ECOLI isochorismatase from Escherichia coli (285 aa) fasta scores%3B opt: 133%2C z-score: 168.5%2C E(): 0.046%2C (29.1%25 identity in 196 aa overlap). Contains Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family.;gbkey=CDS;gene=SCE7.03;product=hydrolase;protein_id=NP_627545.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3693439	3693909	.	+	.	ID=id4200;Dbxref=GeneID:1098773;Note=Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family%2C score 50.00%2C E-value 5.2e-11.;gbkey=misc_feature;gene=SCE7.03
NC_003888.3	RefSeq	gene	3694063	3694917	.	-	.	ID=gene3362;Dbxref=GeneID:1098774;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;gene_synonym=proC,SCE7.04c;locus_tag=SCO3337
NC_003888.3	RefSeq	CDS	3694063	3694917	.	-	0	ID=cds3295;Parent=gene3362;Dbxref=Genbank:NP_627546.1,GeneID:1098774;Name=NP_627546.1;Note=SCE7.04c%2C proC%2C pyrroline-5-carboxylate reductase%2C len: 284aa%3B highly similar to many from prokaryotes and eukaryotes egs. SW:PROC_CORGL proC%2C pyrroline-5-carboxylate reductase from Corynebacterium glutamicum (270 aa) fasta scores%3B opt: 735%2C z-score: 832.5%2C E(): 0%2C (46.2%25 identity in 264 aa overlap) and SW:PROC_ARATH proC%2C pyrroline-5-carboxylate reductase from Arabidopsis thaliana (276 aa) fasta scores%3B opt: 604%2C z-score: 685.7%2C E(): 7.1e-31%2C (41.1%25 identity in 265 aa overlap). Contains Pfam match to entry PF01089 P5CR%2C Delta 1-pyrroline-5-carboxylate reductase and Prosite match to PS00521 Delta 1-pyrroline-5-carboxylate reductase signature.;gbkey=CDS;gene=proC;product=pyrroline-5-carboxylate reductase;protein_id=NP_627546.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3694129	3694869	.	-	.	ID=id4201;Dbxref=GeneID:1098774;Note=Pfam match to entry PF01089 P5CR%2C Delta 1-pyrroline-5-carboxylate reductase%2C score 327.60%2C E-value 1.4e-94.;gbkey=misc_feature;gene=proC
NC_003888.3	RefSeq	sequence_feature	3694150	3694218	.	-	.	ID=id4202;Dbxref=GeneID:1098774;Note=PS00521 Delta 1-pyrroline-5-carboxylate reductase signature.;gbkey=misc_feature;gene=proC
NC_003888.3	RefSeq	gene	3695123	3695923	.	-	.	ID=gene3363;Dbxref=GeneID:1098775;Name=SCE7.05c;gbkey=Gene;gene=SCE7.05c;gene_biotype=protein_coding;gene_synonym=SCE7.05c;locus_tag=SCO3338
NC_003888.3	RefSeq	CDS	3695123	3695923	.	-	0	ID=cds3296;Parent=gene3363;Dbxref=Genbank:NP_627547.1,GeneID:1098775;Name=NP_627547.1;Note=SCE7.05c%2C probable integral membrane protein%2C len: 266aa%3B similar to many hypothetical proteins eg. TR:O33188 (EMBL:Z98268) from Mycobacterium tuberculosis (226 aa) fasta scores%3B opt: 661%2C z-score: 725.6%2C E(): 4.3e-33%2C (45.1%25 identity in 226 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE7.05c;product=hypothetical protein;protein_id=NP_627547.1;transl_table=11
NC_003888.3	RefSeq	gene	3695920	3696750	.	-	.	ID=gene3364;Dbxref=GeneID:1098776;Name=SCE7.06c;gbkey=Gene;gene=SCE7.06c;gene_biotype=protein_coding;gene_synonym=SCE7.06c;locus_tag=SCO3339
NC_003888.3	RefSeq	CDS	3695920	3696750	.	-	0	ID=cds3297;Parent=gene3364;Dbxref=Genbank:NP_627548.1,GeneID:1098776;Name=NP_627548.1;Note=SCE7.06c%2C probable ABC transporter ATP-binding subunit%2C len: 276aa%3B similar to many eg. TR:O33189 (EMBL:Z98268) ABC-type transport protein from Mycobacterium tuberculosis (255 aa) fasta scores%3B opt: 811%2C z-score: 850.0%2C E(): 0%2C (53.8%25 identity in 251 aa overlap) and TR:Q53626 (EMBL:U43537) ABC protein in mithramycin resistance (320 aa) fasta scores%3B opt: 491%2C z-score: 517.8%2C E(): 1.6e-21%2C (37.0%25 identity in 230 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCE7.06c;product=ABC transporter ATP-binding protein;protein_id=NP_627548.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3696055	3696603	.	-	.	ID=id4203;Dbxref=GeneID:1098776;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 187.00%2C E-value 2.9e-52.;gbkey=misc_feature;gene=SCE7.06c
NC_003888.3	RefSeq	sequence_feature	3696238	3696282	.	-	.	ID=id4204;Dbxref=GeneID:1098776;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SCE7.06c
NC_003888.3	RefSeq	sequence_feature	3696559	3696582	.	-	.	ID=id4205;Dbxref=GeneID:1098776;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE7.06c
NC_003888.3	RefSeq	gene	3696891	3697673	.	-	.	ID=gene3365;Dbxref=GeneID:1098777;Name=SCE7.07c;gbkey=Gene;gene=SCE7.07c;gene_biotype=protein_coding;gene_synonym=SCE7.07c;locus_tag=SCO3340
NC_003888.3	RefSeq	CDS	3696891	3697673	.	-	0	ID=cds3298;Parent=gene3365;Dbxref=Genbank:NP_627549.1,GeneID:1098777;Name=NP_627549.1;Note=SCE7.07c%2C unknown%2C len: 400 aa%3B similar to TR:O53392 (EMBL:AL021841) hypothetical protein from Mycobacterium tuberculosis (243 aa) fasta scores%3B opt: 424%2C z-score: 497.4%2C E(): 2.2e-20%2C (35.8%25 identity in 226 aa overlap).;gbkey=CDS;gene=SCE7.07c;product=hypothetical protein;protein_id=NP_627549.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3697756	3698756	.	+	.	ID=id4206;Note=Complex repeat region.;gbkey=repeat_region
NC_003888.3	RefSeq	stem_loop	3697903	3698157	.	+	.	ID=id4207;Note=Score 55: 45/62 ( 72%25) matches%2C 1 gaps 6147-6401.;gbkey=stem_loop
NC_003888.3	RefSeq	stem_loop	3698085	3698439	.	+	.	ID=id4208;Note=Score 70: 54/71 ( 76%25) matches%2C 2 gaps 6329-6683.;gbkey=stem_loop
NC_003888.3	RefSeq	stem_loop	3698335	3698619	.	+	.	ID=id4209;Note=Score 57: 43/61 ( 70%25) matches%2C 0 gaps 6579-6863.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3698670	3699173	.	-	.	ID=gene3366;Dbxref=GeneID:1098778;Name=SCE7.08c;gbkey=Gene;gene=SCE7.08c;gene_biotype=protein_coding;gene_synonym=SCE7.08c;locus_tag=SCO3341
NC_003888.3	RefSeq	CDS	3698670	3699173	.	-	0	ID=cds3299;Parent=gene3366;Dbxref=Genbank:NP_627550.1,GeneID:1098778;Name=NP_627550.1;Note=SCE7.08c%2C possible integral membrane protein%2C len: 167aa%3B Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE7.08c;product=hypothetical protein;protein_id=NP_627550.1;transl_table=11
NC_003888.3	RefSeq	gene	3699215	3699889	.	-	.	ID=gene3367;Dbxref=GeneID:1098779;Name=SCE7.09c;gbkey=Gene;gene=SCE7.09c;gene_biotype=protein_coding;gene_synonym=SCE7.09c;locus_tag=SCO3342
NC_003888.3	RefSeq	CDS	3699215	3699889	.	-	0	ID=cds3300;Parent=gene3367;Dbxref=Genbank:NP_627551.1,GeneID:1098779;Name=NP_627551.1;Note=SCE7.09c%2C possible glycine-rich hypothetical protein%2C len: 224aa%3B Contains a possible N-terminal signal sequence. Also contains Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCE7.09c;product=glycine-rich hypothetical protein;protein_id=NP_627551.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3699824	3699856	.	-	.	ID=id4210;Dbxref=GeneID:1098779;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCE7.09c
NC_003888.3	RefSeq	gene	3700056	3700430	.	-	.	ID=gene3368;Dbxref=GeneID:1098780;Name=SCE7.10c;gbkey=Gene;gene=SCE7.10c;gene_biotype=protein_coding;gene_synonym=SCE7.10c;locus_tag=SCO3343
NC_003888.3	RefSeq	CDS	3700056	3700430	.	-	0	ID=cds3301;Parent=gene3368;Dbxref=Genbank:NP_627552.1,GeneID:1098780;Name=NP_627552.1;Note=SCE7.10c%2C unknown%2C len: 124 aa%3B similar to SW:YRAI_BACSU hypothetical protein from Bacillus subtilis (144 aa) fasta scores%3B opt: 252%2C z-score: 308.2%2C E(): 7.6e-10%2C (42.4%25 identity in 92 aa overlap).;gbkey=CDS;gene=SCE7.10c;product=hypothetical protein;protein_id=NP_627552.1;transl_table=11
NC_003888.3	RefSeq	gene	3700571	3702733	.	+	.	ID=gene3369;Dbxref=GeneID:1098781;Name=SCE7.11;gbkey=Gene;gene=SCE7.11;gene_biotype=protein_coding;gene_synonym=SCE7.11;locus_tag=SCO3344
NC_003888.3	RefSeq	CDS	3700571	3702733	.	+	0	ID=cds3302;Parent=gene3369;Dbxref=Genbank:NP_627553.1,GeneID:1098781;Name=NP_627553.1;Note=SCE7.11%2C probable Ser/Thr protein kinase%2C len: 720 aa%3B similar to many from other Streptomyces spp. eg. SW:AFSK_STRCO Ser/Thr protein kinase from Streptomyces coelicolor (799 aa) fasta scores%3B opt: 896%2C z-score: 827.4%2C E(): 0%2C (33.1%25 identity in 771 aa overlap). Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and Prosite matches to PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature. Also contains five Pfam matches to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat.;gbkey=CDS;gene=SCE7.11;product=Ser/Thr protein kinase;protein_id=NP_627553.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3700634	3701374	.	+	.	ID=id4211;Dbxref=GeneID:1098781;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 136.30%2C E-value 5.5e-37.;gbkey=misc_feature;gene=SCE7.11
NC_003888.3	RefSeq	sequence_feature	3700652	3700720	.	+	.	ID=id4212;Dbxref=GeneID:1098781;Note=PS00107 Protein kinases ATP-binding region signature.;gbkey=misc_feature;gene=SCE7.11
NC_003888.3	RefSeq	sequence_feature	3700988	3701026	.	+	.	ID=id4213;Dbxref=GeneID:1098781;Note=PS00108 Ser/Thr protein kinases active-site signature.;gbkey=misc_feature;gene=SCE7.11
NC_003888.3	RefSeq	sequence_feature	3701750	3701863	.	+	.	ID=id4214;Dbxref=GeneID:1098781;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 23.20%2C E-value 0.0061.;gbkey=misc_feature;gene=SCE7.11
NC_003888.3	RefSeq	sequence_feature	3701885	3701989	.	+	.	ID=id4215;Dbxref=GeneID:1098781;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 4.00%2C E-value 17.;gbkey=misc_feature;gene=SCE7.11
NC_003888.3	RefSeq	sequence_feature	3701990	3702103	.	+	.	ID=id4216;Dbxref=GeneID:1098781;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 15.00%2C E-value 0.4.;gbkey=misc_feature;gene=SCE7.11
NC_003888.3	RefSeq	sequence_feature	3702398	3702511	.	+	.	ID=id4217;Dbxref=GeneID:1098781;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 10.00%2C E-value 2.2.;gbkey=misc_feature;gene=SCE7.11
NC_003888.3	RefSeq	sequence_feature	3702518	3702631	.	+	.	ID=id4218;Dbxref=GeneID:1098781;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 15.40%2C E-value 0.35.;gbkey=misc_feature;gene=SCE7.11
NC_003888.3	RefSeq	gene	3702759	3704612	.	-	.	ID=gene3370;Dbxref=GeneID:1098782;Name=SCE7.12c;gbkey=Gene;gene=SCE7.12c;gene_biotype=protein_coding;gene_synonym=SCE7.12c;locus_tag=SCO3345
NC_003888.3	RefSeq	CDS	3702759	3704612	.	-	0	ID=cds3303;Parent=gene3370;Dbxref=Genbank:NP_627554.1,GeneID:1098782;Name=NP_627554.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;gene=SCE7.12c;product=dihydroxy-acid dehydratase;protein_id=NP_627554.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3702915	3704420	.	-	.	ID=id4219;Dbxref=GeneID:1098782;Note=Pfam match to entry PF00920 ILVD_EDD%2C Dehydratase family%2C score 844.00%2C E-value 5.1e-250.;gbkey=misc_feature;gene=SCE7.12c
NC_003888.3	RefSeq	sequence_feature	3703035	3703070	.	-	.	ID=id4220;Dbxref=GeneID:1098782;Note=PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2.;gbkey=misc_feature;gene=SCE7.12c
NC_003888.3	RefSeq	sequence_feature	3704214	3704246	.	-	.	ID=id4221;Dbxref=GeneID:1098782;Note=PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1.;gbkey=misc_feature;gene=SCE7.12c
NC_003888.3	RefSeq	gene	3704768	3705382	.	-	.	ID=gene3371;Dbxref=GeneID:1098783;Name=SCE7.13c;gbkey=Gene;gene=SCE7.13c;gene_biotype=protein_coding;gene_synonym=SCE7.13c;locus_tag=SCO3346
NC_003888.3	RefSeq	CDS	3704768	3705382	.	-	0	ID=cds3304;Parent=gene3371;Dbxref=Genbank:NP_627555.1,GeneID:1098783;Name=NP_627555.1;Note=SCE7.13c%2C possible transcriptional regulator%2C len: 204 aa%3B similar to SW:UIDR_ECOLI uid operon repressor from Escherichia coli (196 aa) fasta scores%3B opt: 168%2C z-score: 207.0%2C E(): 0.00033%2C (28.7%25 identity in 188 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Note N-terminal region previously sequenced and annotated as a UDP-MurNAc L-alanine ligase-like protein therefore almost (conflict of two amino acids) identical to TR:O87451 (EMBL:AF068843) (63 aa) fasta scores%3B opt: 392%2C z-score: 473.9%2C E(): 4.5e-19%2C (96.8%25 identity in 63 aa overlap).;gbkey=CDS;gene=SCE7.13c;product=transcriptional regulator;protein_id=NP_627555.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3705164	3705304	.	-	.	ID=id4222;Dbxref=GeneID:1098783;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 47.80%2C E-value 1.6e-11.;gbkey=misc_feature;gene=SCE7.13c
NC_003888.3	RefSeq	gene	3705379	3706236	.	-	.	ID=gene3372;Dbxref=GeneID:1098784;Name=SCE7.14c;gbkey=Gene;gene=SCE7.14c;gene_biotype=protein_coding;gene_synonym=SCE7.14c;locus_tag=SCO3347
NC_003888.3	RefSeq	CDS	3705379	3706236	.	-	0	ID=cds3305;Parent=gene3372;Dbxref=Genbank:NP_627556.1,GeneID:1098784;Name=NP_627556.1;Note=SCE7.14c%2C unknown%2C len: 285aa%3B similar to SW:YV24_MYCTU hypothetical protein from Mycobacterium tuberculosis (280 aa) fasta scores%3B opt: 569%2C z-score: 688.7%2C E(): 4.9e-31%2C (54.6%25 identity in 273 aa overlap);gbkey=CDS;gene=SCE7.14c;product=hypothetical protein;protein_id=NP_627556.1;transl_table=11
NC_003888.3	RefSeq	gene	3706398	3707327	.	-	.	ID=gene3373;Dbxref=GeneID:1098785;Name=SCE7.15c;gbkey=Gene;gene=SCE7.15c;gene_biotype=protein_coding;gene_synonym=SCE7.15c;locus_tag=SCO3348
NC_003888.3	RefSeq	CDS	3706398	3707327	.	-	0	ID=cds3306;Parent=gene3373;Dbxref=Genbank:NP_627557.1,GeneID:1098785;Name=NP_627557.1;Note=SCE7.15c%2C possible DNA-binding protein%2C len: 309 aa%3B similar to SW:YV22_MYCTU hypothetical protein from Mycobacterium tuberculosis (328 aa) fasta scores%3B opt: 991%2C z-score: 1143.8%2C E(): 0%2C (55.0%25 identity in 289 aa overlap) and similar to N-terminal region of SW:PPX_ECOLI (EMBL:L06129) Escherichia coli exopolyphosphatase Ppx%2C 512 aa%3B fasta scores: opt: 286 Z-score: 317.1 E(): 5e-10%3B 25.329%25 identity in 304 aa overlap. Contains possible helix-turn-helix motif (+3.03 SD) at 251..272 aa;gbkey=CDS;gene=SCE7.15c;product=DNA-binding protein;protein_id=NP_627557.1;transl_table=11
NC_003888.3	RefSeq	gene	3707399	3708214	.	+	.	ID=gene3374;Dbxref=GeneID:1098786;Name=SCE7.16;gbkey=Gene;gene=SCE7.16;gene_biotype=protein_coding;gene_synonym=SCE7.16;locus_tag=SCO3349
NC_003888.3	RefSeq	CDS	3707399	3708214	.	+	0	ID=cds3307;Parent=gene3374;Dbxref=Genbank:NP_627558.1,GeneID:1098786;Name=NP_627558.1;Note=SCE7.16%2C unknown%2C len: 271aa%3B similar to SW:YV21_MYCTU hypothetical protein from Mycobacterium tuberculosis (296 aa) fasta scores%3B opt: 966%2C z-score: 1180.4%2C E(): 0%2C (50.4%25 identity in 278 aa overlap);gbkey=CDS;gene=SCE7.16;product=hypothetical protein;protein_id=NP_627558.1;transl_table=11
NC_003888.3	RefSeq	gene	3708278	3710074	.	-	.	ID=gene3375;Dbxref=GeneID:1098787;Name=SCE7.17c;gbkey=Gene;gene=SCE7.17c;gene_biotype=protein_coding;gene_synonym=SCE7.17c,SCE94.01c;locus_tag=SCO3350
NC_003888.3	RefSeq	CDS	3708278	3710074	.	-	0	ID=cds3308;Parent=gene3375;Dbxref=Genbank:NP_733601.1,GeneID:1098787;Name=NP_733601.1;Note=SCE94.01c%2C partial CDS unknown%2C alanine-rich protein%2C len: >503aa%3B~SCE7.17c%2C partial CDS%2C proline-rich protein%2C len: >129aa;gbkey=CDS;gene=SCE7.17c;product=hypothetical protein;protein_id=NP_733601.1;transl_table=11
NC_003888.3	RefSeq	gene	3710688	3712097	.	+	.	ID=gene3376;Dbxref=GeneID:1098788;Name=SCE94.02;gbkey=Gene;gene=SCE94.02;gene_biotype=protein_coding;gene_synonym=SCE94.02;locus_tag=SCO3351
NC_003888.3	RefSeq	CDS	3710688	3712097	.	+	0	ID=cds3309;Parent=gene3376;Dbxref=Genbank:NP_627559.1,GeneID:1098788;Name=NP_627559.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;gene=SCE94.02;product=DNA repair protein RadA;protein_id=NP_627559.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3710979	3711002	.	+	.	ID=id4223;Dbxref=GeneID:1098788;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE94.02
NC_003888.3	RefSeq	gene	3712179	3713303	.	+	.	ID=gene3377;Dbxref=GeneID:1098789;Name=SCE94.03;gbkey=Gene;gene=SCE94.03;gene_biotype=protein_coding;gene_synonym=SCE94.03;locus_tag=SCO3352
NC_003888.3	RefSeq	CDS	3712179	3713303	.	+	0	ID=cds3310;Parent=gene3377;Dbxref=Genbank:NP_627560.1,GeneID:1098789;Name=NP_627560.1;Note=non-specific DNA-binding%3B scans chromosomes during sporulation for DNA-damage%3B delays initiation of sporulation%3B participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair;gbkey=CDS;gene=SCE94.03;product=DNA integrity scanning protein DisA;protein_id=NP_627560.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3713169	3713258	.	+	.	ID=id4224;Dbxref=GeneID:1098789;Note=Pfam match to entry PF00633 HHH%2C Helix-hairpin-helix motif.%2C score 26.50%2C E-value 0.00061.;gbkey=misc_feature;gene=SCE94.03
NC_003888.3	RefSeq	gene	3713340	3713720	.	-	.	ID=gene3378;Dbxref=GeneID:1098790;Name=SCE94.04c;gbkey=Gene;gene=SCE94.04c;gene_biotype=protein_coding;gene_synonym=SCE94.04c;locus_tag=SCO3353
NC_003888.3	RefSeq	CDS	3713340	3713720	.	-	0	ID=cds3311;Parent=gene3378;Dbxref=Genbank:NP_627561.1,GeneID:1098790;Name=NP_627561.1;Note=SCE94.04c%2C unknown%2C len: 126aa;gbkey=CDS;gene=SCE94.04c;product=hypothetical protein;protein_id=NP_627561.1;transl_table=11
NC_003888.3	RefSeq	gene	3713731	3714135	.	+	.	ID=gene3379;Dbxref=GeneID:1098791;Name=SCE94.05;gbkey=Gene;gene=SCE94.05;gene_biotype=protein_coding;gene_synonym=SCE94.05;locus_tag=SCO3354
NC_003888.3	RefSeq	CDS	3713731	3714135	.	+	0	ID=cds3312;Parent=gene3379;Dbxref=Genbank:NP_627562.1,GeneID:1098791;Name=NP_627562.1;Note=SCE94.05%2C unknown%2C proline-rich%2C len: aa;gbkey=CDS;gene=SCE94.05;product=hypothetical protein;protein_id=NP_627562.1;transl_table=11
NC_003888.3	RefSeq	gene	3714378	3715304	.	+	.	ID=gene3380;Dbxref=GeneID:1098792;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;gene_synonym=mutY,SCE94.06;locus_tag=SCO3355
NC_003888.3	RefSeq	CDS	3714378	3715304	.	+	0	ID=cds3313;Parent=gene3380;Dbxref=Genbank:NP_627563.1,GeneID:1098792;Name=NP_627563.1;Note=SCE94.06%2C mutY%2C adenine glycosylase%2C len: 308 aa%3B previously partially sequenced therefore partially identical to TR:E1358524 (EMBL:AJ131213) MutY%2C adenine glycosylase from Streptomyces coelicolor (183 aa) fasta scores%3B opt: 1220%2C z-score: 1357.4%2C E(): 0%2C (100.0%25 identity in 183 aa overlap). Also similar to many others e.g. SW:MUTY_SALTY MutY%2C adenine glycosylase from Salmonella typhimurium (350 aa) fasta scores%3B opt: 500%2C z-score: 558.7%2C E(): 8.3e-24%2C (39.4%25 identity in 231 aa overlap). Contains Pfam match to entry PF00730 Endonuclease_3%2C Endonuclease III.;gbkey=CDS;gene=mutY;product=adenine glycosylase;protein_id=NP_627563.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3714516	3715055	.	+	.	ID=id4225;Dbxref=GeneID:1098792;Note=Pfam match to entry PF00730 Endonuclease_3%2C Endonuclease III%2C score 126.40%2C E-value 5.2e-34.;gbkey=misc_feature;gene=mutY
NC_003888.3	RefSeq	gene	3715604	3716137	.	+	.	ID=gene3381;Dbxref=GeneID:1098793;Name=SCE94.07;gbkey=Gene;gene=SCE94.07;gene_biotype=protein_coding;gene_synonym=SCE94.07;locus_tag=SCO3356
NC_003888.3	RefSeq	CDS	3715604	3716137	.	+	0	ID=cds3314;Parent=gene3381;Dbxref=Genbank:NP_627564.1,GeneID:1098793;Name=NP_627564.1;Note=SCE94.07%2C sigE%2C ECF sigma factor%2C len: 177 aa%3B previously sequenced therefore identical to TR:E1358525 (EMBL:AJ131213) SigE%2C ECF sigma factor from Streptomyces coelicolor (177 aa) fasta scores%3B opt: 1140%2C z-score: 1336.4%2C E(): 0%2C (100.0%25 identity in 177 aa overlap). Member of ECF sigma factors. Contains Prosite match to PS01063 Sigma-70 factors ECF subfamily signature. Also contains a possible helix-turn-helix region at 127-148aa (+3.34 SD).;gbkey=CDS;gene=SCE94.07;product=ECF sigma factor;protein_id=NP_627564.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3715697	3715792	.	+	.	ID=id4226;Dbxref=GeneID:1098793;Note=PS01063 Sigma-70 factors ECF subfamily signature.;gbkey=misc_feature;gene=SCE94.07
NC_003888.3	RefSeq	gene	3716194	3716802	.	+	.	ID=gene3382;Dbxref=GeneID:1098794;Name=SCE94.08;gbkey=Gene;gene=SCE94.08;gene_biotype=protein_coding;gene_synonym=SCE94.08;locus_tag=SCO3357
NC_003888.3	RefSeq	CDS	3716194	3716802	.	+	0	ID=cds3315;Parent=gene3382;Dbxref=Genbank:NP_627565.1,GeneID:1098794;Name=NP_627565.1;Note=SCE94.08%2C unknown%2C len: 202aa%3B previously sequenced therefore identical to TR:e1358526 (EMBL:AJ131213) hypothetical protein from Streptomyces coelicolor (202 aa) fasta scores%3B opt: 1347%2C z-score: 1386.9%2C E(): 0%2C (99.5%25 identity in 202 aa overlap). Note conflict in first codon%2C GTG rather than ATG.;gbkey=CDS;gene=SCE94.08;product=hypothetical protein;protein_id=NP_627565.1;transl_table=11
NC_003888.3	RefSeq	gene	3716926	3717630	.	+	.	ID=gene3383;Dbxref=GeneID:1098795;Name=cseB;gbkey=Gene;gene=cseB;gene_biotype=protein_coding;gene_synonym=cseB,SCE94.09;locus_tag=SCO3358
NC_003888.3	RefSeq	CDS	3716926	3717630	.	+	0	ID=cds3316;Parent=gene3383;Dbxref=Genbank:NP_627566.1,GeneID:1098795;Name=NP_627566.1;Note=SCE94.09%2C cseB%2C two-component system response regulator%2C len: 234 aa%3B previously sequenced therefore identical to TR:E1358527 (EMBL:AJ131213) CseB%2C response regulator%2C positive regulator of sigE transcription from Streptomyces coelicolor (234 aa) fasta scores%3B opt: 1529%2C z-score: 1731.2%2C E(): 0%2C (100.0%25 identity in 234 aa overlap). Also similar to many others eg. SW:PHOP_BACSU PhoP%2C response regulator of the phosphate regulon of Bacillus subtilis (240 aa) fasta scores%3B opt: 582%2C z-score: 665.4%2C E(): 9.4e-30%2C (41.2%25 identity in 233 aa overlap). Contains Pfam matches to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal and entry PF00072 response_reg%2C Response regulator receiver domain.;gbkey=CDS;gene=cseB;product=two-component system response regulator;protein_id=NP_627566.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3716938	3717270	.	+	.	ID=id4227;Dbxref=GeneID:1098795;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 129.20%2C E-value 7.3e-35.;gbkey=misc_feature;gene=cseB
NC_003888.3	RefSeq	sequence_feature	3717409	3717612	.	+	.	ID=id4228;Dbxref=GeneID:1098795;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 83.60%2C E-value 1.2e-23.;gbkey=misc_feature;gene=cseB
NC_003888.3	RefSeq	gene	3717647	3719170	.	+	.	ID=gene3384;Dbxref=GeneID:1098796;Name=SCE94.10;gbkey=Gene;gene=SCE94.10;gene_biotype=protein_coding;gene_synonym=SCE94.10;locus_tag=SCO3359
NC_003888.3	RefSeq	CDS	3717647	3719170	.	+	0	ID=cds3317;Parent=gene3384;Dbxref=Genbank:NP_627567.1,GeneID:1098796;Name=NP_627567.1;Note=SCE94.10%2C cseC%2C sensory histidine kinase%2C len: 507 aa%3B previously sequenced therefore identical to TR:E1358528 (EMBL:AJ131213) CseC%2C sensory histidine kinase from Streptomyces coelicolor (507 aa) fasta scores%3B opt: 3298%2C z-score: 3217.4%2C E(): 0%2C (100.0%25 identity in 507 aa overlap). Also similar to many others eg. SW:AFQ2_STRCO sensor protein%2C part of a  two-component regulatory system involved in secondary metabolism in Streptomyces coelicolor (535 aa) fasta scores%3B opt: 382%2C z-score: 378.4%2C E(): 9.2e-14%2C (29.8%25 identity in 413 aa overlap). Contains Pfam matches to entry PF00672 DUF5%2C Domain found in bacterial signal proteins and entry PF00512 signal%2C Signal carboxyl-terminal domain.;gbkey=CDS;gene=SCE94.10;product=sensory histidine kinase contains hydrophobic membrane spanning regions;protein_id=NP_627567.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3718196	3718417	.	+	.	ID=id4229;Dbxref=GeneID:1098796;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 39.60%2C E-value 7.2e-08.;gbkey=misc_feature;gene=SCE94.10
NC_003888.3	RefSeq	sequence_feature	3718457	3719047	.	+	.	ID=id4230;Dbxref=GeneID:1098796;Note=Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 58.20%2C E-value 1.8e-13.;gbkey=misc_feature;gene=SCE94.10
NC_003888.3	RefSeq	gene	3719200	3720033	.	-	.	ID=gene3385;Dbxref=GeneID:1098797;Name=SCE94.11c;gbkey=Gene;gene=SCE94.11c;gene_biotype=protein_coding;gene_synonym=SCE94.11c;locus_tag=SCO3360
NC_003888.3	RefSeq	CDS	3719200	3720033	.	-	0	ID=cds3318;Parent=gene3385;Dbxref=Genbank:NP_627568.1,GeneID:1098797;Name=NP_627568.1;Note=SCE94.11c%2C unknown%2C len: 277aa%3B previously sequenced therefore identical to TR:E1358529 (EMBL:AJ131213) hypothetical protein from Streptomyces coelicolor (277 aa) fasta scores%3B opt: 1897%2C z-score: 2249.5%2C E(): 0%2C (99.6%25 identity in 277 aa overlap).;gbkey=CDS;gene=SCE94.11c;product=hypothetical protein;protein_id=NP_627568.1;transl_table=11
NC_003888.3	RefSeq	gene	3720125	3720577	.	-	.	ID=gene3386;Dbxref=GeneID:1098798;Name=SCE94.12c;gbkey=Gene;gene=SCE94.12c;gene_biotype=protein_coding;gene_synonym=SCE94.12c;locus_tag=SCO3361
NC_003888.3	RefSeq	CDS	3720125	3720577	.	-	0	ID=cds3319;Parent=gene3386;Dbxref=Genbank:NP_627569.1,GeneID:1098798;Name=NP_627569.1;Note=SCE94.12c%2C lrpA%2C probable AsnC-family transcriptional regulator%2C len: 150a a%3B previously sequenced therefore identical to TR:E1358530 (EMBL:AJ131213) LrpA%2C transcriptional regulator from Streptomyces coelicolor (150 aa) fasta scores%3B opt: 953%2C z-score: 1220.9%2C E(): 0%2C (100.0%25 identity in 150 aa overlap). Also similar to many amino acid responsive regulators e.g. TR:O33467 (EMBL:D89015) MdeR%2C transcriptional regulator from Pseudomonas putida (159 aa) fasta scores%3B opt: 380%2C z-score: 494.5%2C E(): 3.1e-20%2C (40.0%25 identity in 150 aa overlap). Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family. Also contains a possible helix-turn-helix at 19-40aa (+4.10 SD).;gbkey=CDS;gene=SCE94.12c;product=transcription regulator AsnC;protein_id=NP_627569.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3720194	3720505	.	-	.	ID=id4231;Dbxref=GeneID:1098798;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 111.00%2C E-value 2.3e-29.;gbkey=misc_feature;gene=SCE94.12c
NC_003888.3	RefSeq	gene	3720696	3721331	.	+	.	ID=gene3387;Dbxref=GeneID:1098799;Name=SCE94.13;gbkey=Gene;gene=SCE94.13;gene_biotype=protein_coding;gene_synonym=SCE94.13;locus_tag=SCO3362
NC_003888.3	RefSeq	CDS	3720696	3721331	.	+	0	ID=cds3320;Parent=gene3387;Dbxref=Genbank:NP_627570.1,GeneID:1098799;Name=NP_627570.1;Note=SCE94.13%2C membrane protein%2C len: 211 aa%3B weakly similar to many eg. SW:YRHP_BACSU hypothetical protein located close to sigma factor genes in Bacillus subtilis (210 aa) fasta scores%3B opt: 192%2C z-score: 222.0%2C E(): 4.7e-05%2C (25.0%25 identity in 164 aa overlap). Contains a possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SCE94.13;product=hypothetical protein;protein_id=NP_627570.1;transl_table=11
NC_003888.3	RefSeq	gene	3721342	3721785	.	+	.	ID=gene3388;Dbxref=GeneID:1098800;Name=SCE94.14;gbkey=Gene;gene=SCE94.14;gene_biotype=protein_coding;gene_synonym=SCE94.14;locus_tag=SCO3363
NC_003888.3	RefSeq	CDS	3721342	3721785	.	+	0	ID=cds3321;Parent=gene3388;Dbxref=Genbank:NP_627571.1,GeneID:1098800;Name=NP_627571.1;Note=SCE94.14%2C possible acetyltransferase%2C len: 147aa%3B weakly similar to many eg. SW:PAT_STRHY phosphinothricin acetyltransferase from Streptomyces hygroscopicus (183 aa) fasta scores%3B opt: 116%2C z-score: 157.5%2C E(): 0.19%2C (27.9%25 identity in 136 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCE94.14;product=acetyltransferase;protein_id=NP_627571.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3721357	3721731	.	+	.	ID=id4232;Dbxref=GeneID:1098800;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 61.80%2C E-value 1.5e-14;gbkey=misc_feature;gene=SCE94.14
NC_003888.3	RefSeq	gene	3721792	3722244	.	+	.	ID=gene3389;Dbxref=GeneID:1098801;Name=SCE94.15;gbkey=Gene;gene=SCE94.15;gene_biotype=protein_coding;gene_synonym=SCE94.15;locus_tag=SCO3364
NC_003888.3	RefSeq	CDS	3721792	3722244	.	+	0	ID=cds3322;Parent=gene3389;Dbxref=Genbank:NP_627572.1,GeneID:1098801;Name=NP_627572.1;Note=SCE94.15%2C unknown%2C len: 150aa;gbkey=CDS;gene=SCE94.15;product=hypothetical protein;protein_id=NP_627572.1;transl_table=11
NC_003888.3	RefSeq	gene	3722414	3723256	.	-	.	ID=gene3390;Dbxref=GeneID:1098802;Name=SCE94.16c;gbkey=Gene;gene=SCE94.16c;gene_biotype=protein_coding;gene_synonym=SCE94.16c;locus_tag=SCO3365
NC_003888.3	RefSeq	CDS	3722414	3723256	.	-	0	ID=cds3323;Parent=gene3390;Dbxref=Genbank:NP_627573.1,GeneID:1098802;Name=NP_627573.1;Note=SCE94.16c%2C unknown%2C len: aa%3B similar to others from Streptomyces coelicolor eg. TR:E1370777 (EMBL:AL035212) possible DNA binding protein (303 aa) fasta scores%3B opt: 420%2C z-score: 512.3%2C E(): 3.2e-21%2C (32.5%25 identity in 265 aa overlap).;gbkey=CDS;gene=SCE94.16c;product=hypothetical protein;protein_id=NP_627573.1;transl_table=11
NC_003888.3	RefSeq	gene	3723844	3725439	.	-	.	ID=gene3391;Dbxref=GeneID:1098803;Name=SCE94.17c;gbkey=Gene;gene=SCE94.17c;gene_biotype=protein_coding;gene_synonym=SCE94.17c;locus_tag=SCO3366
NC_003888.3	RefSeq	CDS	3723844	3725439	.	-	0	ID=cds3324;Parent=gene3391;Dbxref=Genbank:NP_627574.1,GeneID:1098803;Name=NP_627574.1;Note=SCE94.17c%2C possible exporter%2C len: 531aa%3B similar to many export proteins eg. TR:G4240426 (EMBL:AF080235) antibiotic transporter landomycin biosynthesis cluster of Streptomyces cyanogenus S136 (517 aa) fasta scores%3B opt: 1848%2C z-score: 1973.8%2C E(): 0%2C (55.2%25 identity in 511 aa overlap). also similar to TR:E1370405 (EMBL:AL035161) efflux protein from Streptomyces coelicolor (815 aa) fasta scores%3B opt: 1622%2C z-score: 1730.4%2C E(): 0%2C (46.1%25 identity in 518 aa overlap). Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter. Also contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE94.17c;product=exporter;protein_id=NP_627574.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3724231	3725373	.	-	.	ID=id4233;Dbxref=GeneID:1098803;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -81.20%2C E-value 0.0036.;gbkey=misc_feature;gene=SCE94.17c
NC_003888.3	RefSeq	gene	3725598	3726185	.	+	.	ID=gene3392;Dbxref=GeneID:1098804;Name=SCE94.18;gbkey=Gene;gene=SCE94.18;gene_biotype=protein_coding;gene_synonym=SCE94.18;locus_tag=SCO3367
NC_003888.3	RefSeq	CDS	3725598	3726185	.	+	0	ID=cds3325;Parent=gene3392;Dbxref=Genbank:NP_627575.1,GeneID:1098804;Name=NP_627575.1;Note=SCE94.18%2C possible tetR-family regulator%2C len: 195 aa%3B similar to many regulators e.g. TR:G4240425 (EMBL:AF080235) LanK from Streptomyces cyanogenus S136 (192 aa) fasta scores%3B opt: 584%2C z-score: 737.3%2C E(): 0%2C (51.4%25 identity in 185 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and Prosite match to PS01081 Bacterial regulatory proteins%2C tetR family signature. Also contains a probable helix-turn-helix at 43-55aa (+5.78 SD).;gbkey=CDS;gene=SCE94.18;product=TetR family transcriptional regulator;protein_id=NP_627575.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3725646	3725786	.	+	.	ID=id4234;Dbxref=GeneID:1098804;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 62.80%2C E-value 1.1e-15.;gbkey=misc_feature;gene=SCE94.18
NC_003888.3	RefSeq	sequence_feature	3725682	3725774	.	+	.	ID=id4235;Dbxref=GeneID:1098804;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;gene=SCE94.18
NC_003888.3	RefSeq	gene	3726219	3726905	.	-	.	ID=gene3393;Dbxref=GeneID:1098805;Name=SCE94.19c;gbkey=Gene;gene=SCE94.19c;gene_biotype=protein_coding;gene_synonym=SCE94.19c;locus_tag=SCO3368
NC_003888.3	RefSeq	CDS	3726219	3726905	.	-	0	ID=cds3326;Parent=gene3393;Dbxref=Genbank:NP_627576.1,GeneID:1098805;Name=NP_627576.1;Note=SCE94.19c%2C possible peptidase (hypothetical protein)%2C len: 228 aa%3B similar to SW:ALE1_STACP glycylglycine endopeptidase from Staphylococcus capitis EPK1 (362 aa) fasta scores%3B opt: 329%2C z-score: 324.3%2C E(): 9.5e-11%2C (38.9%25 identity in 180 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE94.19c;product=peptidase;protein_id=NP_627576.1;transl_table=11
NC_003888.3	RefSeq	gene	3727304	3729892	.	+	.	ID=gene3394;Dbxref=GeneID:1098806;Name=SCE94.20;gbkey=Gene;gene=SCE94.20;gene_biotype=protein_coding;gene_synonym=SCE94.20;locus_tag=SCO3369
NC_003888.3	RefSeq	CDS	3727304	3729892	.	+	0	ID=cds3327;Parent=gene3394;Dbxref=Genbank:NP_627577.1,GeneID:1098806;Name=NP_627577.1;Note=SCE94.20%2C possible large ATP-binding protein%2C len: 862aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Similar to two closely neighbouring genes SCE94.23 and SCE94.21 suggesting local duplication fasta scores%3B SCE94.23 opt: 1840%2C z-score: 1675.4%2C E(): 0%2C (48.9%25 identity in 839 aa overlap)%2C SCE94.21 opt: 789%2C z-score: 717.7%2C E(): 5e-35%2C (44.7%25 identity in 877 aa overlap).;gbkey=CDS;gene=SCE94.20;product=large ATP-binding protein;protein_id=NP_627577.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3728108	3728131	.	+	.	ID=id4236;Dbxref=GeneID:1098806;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE94.20
NC_003888.3	RefSeq	gene	3729902	3732487	.	+	.	ID=gene3395;Dbxref=GeneID:1098807;Name=SCE94.21;gbkey=Gene;gene=SCE94.21;gene_biotype=protein_coding;gene_synonym=SCE94.21;locus_tag=SCO3370
NC_003888.3	RefSeq	CDS	3729902	3732487	.	+	0	ID=cds3328;Parent=gene3395;Dbxref=Genbank:NP_627578.1,GeneID:1098807;Name=NP_627578.1;Note=SCE94.21%2C possible large ATP-binding protein%2C len: 861 aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Similar to two closely neighbouring genes SCE94.23 and SCE94.20 suggesting local duplication%3B fasta scores: SCE94.23 opt: 984%2C z-score: 883.6%2C E(): 0%2C (43.6%25 identity in 857 aa overlap)%2C SCE94.20 opt: 789%2C z-score: 709.4%2C E(): 1.4e-34%2C (44.7%25 identity in 877 aa overlap);gbkey=CDS;gene=SCE94.21;product=large ATP-binding protein;protein_id=NP_627578.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3730679	3730702	.	+	.	ID=id4237;Dbxref=GeneID:1098807;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE94.21
NC_003888.3	RefSeq	gene	3732558	3733277	.	+	.	ID=gene3396;Dbxref=GeneID:1098808;Name=SCE94.22;gbkey=Gene;gene=SCE94.22;gene_biotype=protein_coding;gene_synonym=SCE94.22;locus_tag=SCO3371
NC_003888.3	RefSeq	CDS	3732558	3733277	.	+	0	ID=cds3329;Parent=gene3396;Dbxref=Genbank:NP_627579.1,GeneID:1098808;Name=NP_627579.1;Note=SCE94.22%2C unknown%2C len: 239aa;gbkey=CDS;gene=SCE94.22;product=hypothetical protein;protein_id=NP_627579.1;transl_table=11
NC_003888.3	RefSeq	gene	3733321	3736353	.	+	.	ID=gene3397;Dbxref=GeneID:1098809;Name=SCE94.23;gbkey=Gene;gene=SCE94.23;gene_biotype=protein_coding;gene_synonym=SCE94.23;locus_tag=SCO3372
NC_003888.3	RefSeq	CDS	3733321	3736353	.	+	0	ID=cds3330;Parent=gene3397;Dbxref=Genbank:NP_627580.1,GeneID:1098809;Name=NP_627580.1;Note=SCE94.23%2C possible large ATP-binding protein%2C len: 1010aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Similar to two closely neighbouring genes SCE94.20 and SCE94.21 suggesting local duplication fasta scores%3B SCE94.20 opt: 1840%2C z-score: 1632.1%2C E(): 0%2C (48.9%25 identity in 839 aa overlap)%2C SCE94.21 opt: 984%2C z-score: 872.5%2C E(): 0%2C (43.8%25 identity in 857 aa overlap).;gbkey=CDS;gene=SCE94.23;product=large ATP-binding protein;protein_id=NP_627580.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3734137	3734160	.	+	.	ID=id4238;Dbxref=GeneID:1098809;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE94.23
NC_003888.3	RefSeq	gene	3736431	3738956	.	-	.	ID=gene3398;Dbxref=GeneID:1098810;Name=SCE94.24c;gbkey=Gene;gene=SCE94.24c;gene_biotype=protein_coding;gene_synonym=SCE94.24c;locus_tag=SCO3373
NC_003888.3	RefSeq	CDS	3736431	3738956	.	-	0	ID=cds3331;Parent=gene3398;Dbxref=Genbank:NP_627581.1,GeneID:1098810;Name=NP_627581.1;Note=SCE94.24c%2C probable Clp-family ATP-binding protease%2C len: 841aa%3B highly similar to many egs. SW:MECB_BACSU MecB/ClpC pleiotropic regulator controlling competence gene expression and growth at high temperature in Bacillus subtilis (810 aa) fasta scores%3B opt: 3266%2C z-score: 3278.7%2C E(): 0%2C (61.6%25 identity in 805 aa overlap) and TR:Q48760 (EMBL:U40604) ClpC ATPase required for stress tolerance and in vivo survival of Listeria monocytogenes (825 aa) fasta scores%3B opt: 3204%2C z-score: 3216.3%2C E(): 0%2C (61.2%25 identity in 804 aa overlap). Also similar to TR:O69936 (EMBL:AL023861) clp protease ATP binding subunit from Streptomyces coelicolor (842 aa) fasta scores%3B opt: 2357%2C z-score: 2283.1%2C E(): 0%2C (48.9%25 identity in 829 aa overlap). Contains Pfam match to entry PF00495 clpA_B%2C Chaperonin clpA/B and two Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCE94.24c;product=Clp-family ATP-binding protease;protein_id=NP_627581.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3736560	3737537	.	-	.	ID=id4239;Dbxref=GeneID:1098810;Note=Pfam match to entry PF00495 clpA_B%2C Chaperonin clpA/B%2C score 700.90%2C E-value 6e-207.;gbkey=misc_feature;gene=SCE94.24c
NC_003888.3	RefSeq	sequence_feature	3737289	3737312	.	-	.	ID=id4240;Dbxref=GeneID:1098810;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE94.24c
NC_003888.3	RefSeq	sequence_feature	3738300	3738323	.	-	.	ID=id4241;Dbxref=GeneID:1098810;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE94.24c
NC_003888.3	RefSeq	gene	3739398	3740099	.	+	.	ID=gene3399;Dbxref=GeneID:1098811;Name=SCE94.25;gbkey=Gene;gene=SCE94.25;gene_biotype=protein_coding;gene_synonym=SCE94.25;locus_tag=SCO3374
NC_003888.3	RefSeq	CDS	3739398	3740099	.	+	0	ID=cds3332;Parent=gene3399;Dbxref=Genbank:NP_627582.1,GeneID:1098811;Name=NP_627582.1;Note=SCE94.25%2C unknown%2C proline-rich%2C len: 702 aa;gbkey=CDS;gene=SCE94.25;product=hypothetical protein;protein_id=NP_627582.1;transl_table=11
NC_003888.3	RefSeq	gene	3740100	3740435	.	-	.	ID=gene3400;Dbxref=GeneID:1098812;Name=SCE94.26c;gbkey=Gene;gene=SCE94.26c;gene_biotype=protein_coding;gene_synonym=SCE94.26c;locus_tag=SCO3375
NC_003888.3	RefSeq	CDS	3740100	3740435	.	-	0	ID=cds3333;Parent=gene3400;Dbxref=Genbank:NP_627583.1,GeneID:1098812;Name=NP_627583.1;Note=SCE94.26c%2C Lsr2-like protein%2C len: 111 aa%3B similar to SW:LSR2_MYCLE surface antigen protein from Mycobacterium tuberculosis (112 aa) fasta scores%3B opt: 358%2C z-score: 416.0%2C E(): 7.4e-16%2C (55.4%25 identity in 112 aa overlap).;gbkey=CDS;gene=SCE94.26c;product=Lsr2-like protein;protein_id=NP_627583.1;transl_table=11
NC_003888.3	RefSeq	gene	3740711	3741220	.	-	.	ID=gene3401;Dbxref=GeneID:1098813;Name=SCE94.27c;gbkey=Gene;gene=SCE94.27c;gene_biotype=protein_coding;gene_synonym=SCE94.27c;locus_tag=SCO3376
NC_003888.3	RefSeq	CDS	3740711	3741220	.	-	0	ID=cds3334;Parent=gene3401;Dbxref=Genbank:NP_627584.1,GeneID:1098813;Name=NP_627584.1;Note=catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis;gbkey=CDS;gene=SCE94.27c;product=N-acetylglutamate synthase;protein_id=NP_627584.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3740852	3741202	.	-	.	ID=id4242;Dbxref=GeneID:1098813;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 35.40%2C E-value 1.3e-06.;gbkey=misc_feature;gene=SCE94.27c
NC_003888.3	RefSeq	gene	3741230	3741604	.	-	.	ID=gene3402;Dbxref=GeneID:1098814;Name=SCE94.28c;gbkey=Gene;gene=SCE94.28c;gene_biotype=protein_coding;gene_synonym=SCE94.28c;locus_tag=SCO3377
NC_003888.3	RefSeq	CDS	3741230	3741604	.	-	0	ID=cds3335;Parent=gene3402;Dbxref=Genbank:NP_627585.1,GeneID:1098814;Name=NP_627585.1;Note=SCE94.28c%2C unknown%2C len: 124 aa%3B similar to hypothetical proteins eg. TR:O32909 (EMBL:AL008609) from Mycobacterium leprae (142 aa) fasta scores%3B opt: 215%2C z-score: 273.2%2C E(): 6.6e-08%2C (41.9%25 identity in 105 aa overlap).;gbkey=CDS;gene=SCE94.28c;product=hypothetical protein;protein_id=NP_627585.1;transl_table=11
NC_003888.3	RefSeq	gene	3741763	3741942	.	-	.	ID=gene3403;Dbxref=GeneID:1098815;Name=SCE94.29c;gbkey=Gene;gene=SCE94.29c;gene_biotype=protein_coding;gene_synonym=SCE94.29c;locus_tag=SCO3378
NC_003888.3	RefSeq	CDS	3741763	3741942	.	-	0	ID=cds3336;Parent=gene3403;Dbxref=Genbank:NP_627586.1,GeneID:1098815;Name=NP_627586.1;Note=SCE94.29c%2C small membrane protein%2C len: 47 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE94.29c;product=small membrane protein;protein_id=NP_627586.1;transl_table=11
NC_003888.3	RefSeq	gene	3741966	3742592	.	-	.	ID=gene3404;Dbxref=GeneID:1098816;Name=SCE94.30c;gbkey=Gene;gene=SCE94.30c;gene_biotype=protein_coding;gene_synonym=SCE94.30c;locus_tag=SCO3379
NC_003888.3	RefSeq	CDS	3741966	3742592	.	-	0	ID=cds3337;Parent=gene3404;Dbxref=Genbank:NP_627587.1,GeneID:1098816;Name=NP_627587.1;Note=SCE94.30c%2C unknown%2C proline-rich%2C len: 208aa;gbkey=CDS;gene=SCE94.30c;product=hypothetical protein;protein_id=NP_627587.1;transl_table=11
NC_003888.3	RefSeq	gene	3743026	3743823	.	-	.	ID=gene3405;Dbxref=GeneID:1098817;Name=SCE94.31c;gbkey=Gene;gene=SCE94.31c;gene_biotype=protein_coding;gene_synonym=SCE94.31c;locus_tag=SCO3380
NC_003888.3	RefSeq	CDS	3743026	3743823	.	-	0	ID=cds3338;Parent=gene3405;Dbxref=Genbank:NP_627588.1,GeneID:1098817;Name=NP_627588.1;Note=type III%3B catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis%3B type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP;gbkey=CDS;gene=SCE94.31c;product=pantothenate kinase;protein_id=NP_627588.1;transl_table=11
NC_003888.3	RefSeq	gene	3743829	3744818	.	-	.	ID=gene3406;Dbxref=GeneID:1098818;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;gene_synonym=nadC,SCE94.32c;locus_tag=SCO3381
NC_003888.3	RefSeq	CDS	3743829	3744818	.	-	0	ID=cds3339;Parent=gene3406;Dbxref=Genbank:NP_627589.1,GeneID:1098818;Name=NP_627589.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;gene=nadC;product=nicotinate-nucleotide pyrophosphorylase;protein_id=NP_627589.1;transl_table=11
NC_003888.3	RefSeq	gene	3744824	3746566	.	-	.	ID=gene3407;Dbxref=GeneID:1098819;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;gene_synonym=nadB,SCE94.33c;locus_tag=SCO3382
NC_003888.3	RefSeq	CDS	3744824	3746566	.	-	0	ID=cds3340;Parent=gene3407;Dbxref=Genbank:NP_627590.1,GeneID:1098819;Name=NP_627590.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;gene=nadB;product=L-aspartate oxidase;protein_id=NP_627590.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3745088	3745111	.	-	.	ID=id4243;Dbxref=GeneID:1098819;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=nadB
NC_003888.3	RefSeq	sequence_feature	3745325	3746218	.	-	.	ID=id4244;Dbxref=GeneID:1098819;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 413.90%2C E-value 1.5e-120.;gbkey=misc_feature;gene=nadB
NC_003888.3	RefSeq	gene	3746563	3747576	.	-	.	ID=gene3408;Dbxref=GeneID:1098820;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;gene_synonym=SCE126.01c,SCE94.34c;locus_tag=SCO3383
NC_003888.3	RefSeq	CDS	3746563	3747576	.	-	0	ID=cds3341;Parent=gene3408;Dbxref=Genbank:NP_733602.1,GeneID:1098820;Name=NP_733602.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantoate--beta-alanine ligase;protein_id=NP_733602.1;transl_table=11
NC_003888.3	RefSeq	gene	3747573	3748835	.	-	.	ID=gene3409;Dbxref=GeneID:1098821;Name=SCE126.02c;gbkey=Gene;gene=SCE126.02c;gene_biotype=protein_coding;gene_synonym=SCE126.02c;locus_tag=SCO3384
NC_003888.3	RefSeq	CDS	3747573	3748835	.	-	0	ID=cds3342;Parent=gene3409;Dbxref=Genbank:NP_627591.1,GeneID:1098821;Name=NP_627591.1;Note=SCE126.02c%2C unknown%2C len: 420aa%3B similar to TR:O06279 (EMBL:Z95557) hypothetical protein from Mycobacterium tuberculosis (303 aa) fasta scores%3B opt: 683%2C z-score: 584.3%2C E(): 3.1e-25%2C (49.3%25 identity in 284 aa overlap).;gbkey=CDS;gene=SCE126.02c;product=hypothetical protein;protein_id=NP_627591.1;transl_table=11
NC_003888.3	RefSeq	gene	3749036	3750247	.	+	.	ID=gene3410;Dbxref=GeneID:1098822;Name=SCE126.03;gbkey=Gene;gene=SCE126.03;gene_biotype=protein_coding;gene_synonym=SCE126.03;locus_tag=SCO3385
NC_003888.3	RefSeq	CDS	3749036	3750247	.	+	0	ID=cds3343;Parent=gene3410;Dbxref=Genbank:NP_627592.1,GeneID:1098822;Name=NP_627592.1;Note=SCE126.03%2C possible lyase%2C len: 403aa%3B weakly similar to many eg. SW:LTAA_AERJA L-allo-threonine aldolase from Aeromonas jandaei DK-39 (338 aa) fasta scores%3B opt: 257%2C z-score: 293.4%2C E(): 5e-09%2C (31.4%25 identity in 255 aa overlap).;gbkey=CDS;gene=SCE126.03;product=L-allo-threonine aldolase;protein_id=NP_627592.1;transl_table=11
NC_003888.3	RefSeq	gene	3750419	3750691	.	+	.	ID=gene3411;Dbxref=GeneID:1098823;Name=SCE126.04;gbkey=Gene;gene=SCE126.04;gene_biotype=protein_coding;gene_synonym=SCE126.04;locus_tag=SCO3386
NC_003888.3	RefSeq	CDS	3750419	3750691	.	+	0	ID=cds3344;Parent=gene3411;Dbxref=Genbank:NP_627593.1,GeneID:1098823;Name=NP_627593.1;Note=SCE126.04%2C unknown%2C len: 90aa;gbkey=CDS;gene=SCE126.04;product=hypothetical protein;protein_id=NP_627593.1;transl_table=11
NC_003888.3	RefSeq	gene	3750688	3751794	.	+	.	ID=gene3412;Dbxref=GeneID:1098824;Name=SCE126.05;gbkey=Gene;gene=SCE126.05;gene_biotype=protein_coding;gene_synonym=SCE126.05;locus_tag=SCO3387
NC_003888.3	RefSeq	CDS	3750688	3751794	.	+	0	ID=cds3345;Parent=gene3412;Dbxref=Genbank:NP_627594.1,GeneID:1098824;Name=NP_627594.1;Note=SCE126.05%2C possible transcriptional regulator%2C len: 368aa%3B similar to many in a limited region which corresponds to the probable DNA-binding site eg. SW:SMTB_SYNP7 SmtB transcriptional repressor from Synechococcus sp. (Strain PCC7942) (122 aa) fasta scores%3B opt: 169%2C z-score: 204.8%2C E(): 0.00043%2C (37.0%25 identity in 92 aa overlap). Contains Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=SCE126.05;product=transcriptional regulator;protein_id=NP_627594.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3751549	3751782	.	+	.	ID=id4245;Dbxref=GeneID:1098824;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 45.10%2C E-value 1.6e-09.;gbkey=misc_feature;gene=SCE126.05
NC_003888.3	RefSeq	gene	3751837	3752478	.	-	.	ID=gene3413;Dbxref=GeneID:1098825;Name=SCE126.06c;gbkey=Gene;gene=SCE126.06c;gene_biotype=protein_coding;gene_synonym=SCE126.06c;locus_tag=SCO3388
NC_003888.3	RefSeq	CDS	3751837	3752478	.	-	0	ID=cds3346;Parent=gene3413;Dbxref=Genbank:NP_627595.1,GeneID:1098825;Name=NP_627595.1;Note=SCE126.06c%2C TmrB-like protein%2C len: 213aa%3B similar to SW:TMRB_BACSU tunicamycin resistance protein (binds tunicamycin) from Bacillus subtilis (197 aa) fasta scores%3B opt: 335%2C z-score: 416.0%2C E(): 7.3e-16%2C (38.9%25 identity in 203 aa overlap).;gbkey=CDS;gene=SCE126.06c;product=TmrB-like protein;protein_id=NP_627595.1;transl_table=11
NC_003888.3	RefSeq	gene	3752539	3753213	.	-	.	ID=gene3414;Dbxref=GeneID:1098826;Name=SCE126.07c;gbkey=Gene;gene=SCE126.07c;gene_biotype=protein_coding;gene_synonym=SCE126.07c;locus_tag=SCO3389
NC_003888.3	RefSeq	CDS	3752539	3753213	.	-	0	ID=cds3347;Parent=gene3414;Dbxref=Genbank:NP_627596.1,GeneID:1098826;Name=NP_627596.1;Note=SCE126.07c%2C probable two component system response regulator%2C len: 224aa%3B similar to many%2C particularly others from Streptomyces coelicolor eg. TR:O86632 (EMBL:AL031155) two component regulator (222 aa) fasta scores%3B opt: 784%2C z-score: 897.1%2C E(): 0%2C (57.7%25 identity in 215 aa overlap). Also similar to SW:DEGU_BACSU transcriptional regulator protein DegU from Bacillus subtilis (229 aa) fasta scores%3B opt: 466%2C z-score: 538.0%2C E(): 1.2e-22%2C (37.2%25 identity in 223 aa overlap). Contains Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain and to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Also contains Prosite match to PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=CDS;gene=SCE126.07c;product=two component system response regulator;protein_id=NP_627596.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3752557	3752754	.	-	.	ID=id4246;Dbxref=GeneID:1098826;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 93.20%2C E-value 5.3e-24.;gbkey=misc_feature;gene=SCE126.07c
NC_003888.3	RefSeq	sequence_feature	3752620	3752703	.	-	.	ID=id4247;Dbxref=GeneID:1098826;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=SCE126.07c
NC_003888.3	RefSeq	sequence_feature	3752866	3753207	.	-	.	ID=id4248;Dbxref=GeneID:1098826;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 122.50%2C E-value 7.7e-33.;gbkey=misc_feature;gene=SCE126.07c
NC_003888.3	RefSeq	gene	3753279	3754484	.	-	.	ID=gene3415;Dbxref=GeneID:1098827;Name=SCE126.08c;gbkey=Gene;gene=SCE126.08c;gene_biotype=protein_coding;gene_synonym=SCE126.08c;locus_tag=SCO3390
NC_003888.3	RefSeq	CDS	3753279	3754484	.	-	0	ID=cds3348;Parent=gene3415;Dbxref=Genbank:NP_627597.1,GeneID:1098827;Name=NP_627597.1;Note=SCE126.08c%2C possible two component sensor kinase%2C len: 401 aa%3B similar to many%2C often from Streptomyces coelicolor e.g. TR:O88024 (EMBL:AL031107) two component sensor (405 aa) fasta scores%3B opt: 718%2C z-score: 796.4%2C E(): 0%2C (42.2%25 identity in 313 aa overlap). Also similar to SW:DEGS_BACBR sensor protein DegS from Bacillus brevis (386 aa) fasta scores%3B opt: 320%2C z-score: 358.3%2C E(): 1.2e-12%2C (30.1%25 identity in 236 aa overlap). N-terminal half contains possible membrane spanning hydrophobic regions followed by a possible coiled-coil at approx. aa 180;gbkey=CDS;gene=SCE126.08c;product=two component sensor kinase;protein_id=NP_627597.1;transl_table=11
NC_003888.3	RefSeq	gene	3754603	3755691	.	+	.	ID=gene3416;Dbxref=GeneID:1098828;Name=SCE126.09;gbkey=Gene;gene=SCE126.09;gene_biotype=protein_coding;gene_synonym=SCE126.09;locus_tag=SCO3391
NC_003888.3	RefSeq	CDS	3754603	3755691	.	+	0	ID=cds3349;Parent=gene3416;Dbxref=Genbank:NP_627598.1,GeneID:1098828;Name=NP_627598.1;Note=SCE126.09%2C unknown%2Clen: 362aa%3B similar to TR:O25492 (EMBL:AE000593) hypothetical protein from Helicobacter pylori (336 aa) fasta scores%3B opt: 143%2C z-score: 161.4%2C E(): 0.11%2C (31.5%25 identity in 111 aa overlap).;gbkey=CDS;gene=SCE126.09;product=hypothetical protein;protein_id=NP_627598.1;transl_table=11
NC_003888.3	RefSeq	gene	3755656	3756807	.	-	.	ID=gene3417;Dbxref=GeneID:1098829;Name=nuoD2;gbkey=Gene;gene=nuoD2;gene_biotype=protein_coding;gene_synonym=nuoD2,SCE126.10;locus_tag=SCO3392
NC_003888.3	RefSeq	CDS	3755656	3756807	.	-	0	ID=cds3350;Parent=gene3417;Dbxref=Genbank:NP_627599.1,GeneID:1098829;Name=NP_627599.1;Note=SCE126.10%2C nuoD2%2C probable NADH dehydrogenase subunit%2C len: 383 aa%3B similar to many others e.g. SW:NUOD_ECOLI NADH dehydrogenase chain D (407 aa) fasta scores%3B opt: 689%2C z-score: 821.3%2C E(): 0%2C (33.2%25 identity in 397 aa overlap). Contains two Pfam matches to entry PF00346 complex1_49Kd%2C Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit and Prosite match to PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature.;gbkey=CDS;gene=nuoD2;product=NADH dehydrogenase subunit NuoD2;protein_id=NP_627599.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3755659	3755874	.	-	.	ID=id4249;Dbxref=GeneID:1098829;Note=Pfam match to entry PF00346 complex1_49Kd%2C Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit%2C score 76.80%2C E-value 2e-27.;gbkey=misc_feature;gene=nuoD2
NC_003888.3	RefSeq	sequence_feature	3755995	3756411	.	-	.	ID=id4250;Dbxref=GeneID:1098829;Note=Pfam match to entry PF00346 complex1_49Kd%2C Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit%2C score 112.40%2C E-value 3.2e-40.;gbkey=misc_feature;gene=nuoD2
NC_003888.3	RefSeq	sequence_feature	3756607	3756642	.	-	.	ID=id4251;Dbxref=GeneID:1098829;Note=PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature.;gbkey=misc_feature;gene=nuoD2
NC_003888.3	RefSeq	gene	3756941	3757396	.	+	.	ID=gene3418;Dbxref=GeneID:1098830;Name=SCE126.11;gbkey=Gene;gene=SCE126.11;gene_biotype=protein_coding;gene_synonym=SCE126.11;locus_tag=SCO3393
NC_003888.3	RefSeq	CDS	3756941	3757396	.	+	0	ID=cds3351;Parent=gene3418;Dbxref=Genbank:NP_627600.1,GeneID:1098830;Name=NP_627600.1;Note=SCE126.11%2C possible integral membrane protein%2C len: 151aa%3B similar to other hypotheticals eg. TR:P96615 (EMBL:AB001488) hypothetical protein from Bacillus subtilis (159 aa) fasta scores%3B opt: 208%2C z-score: 264.3%2C E(): 2.1e-07%2C (30.3%25 identity in 145 aa overlap). Contains a possible membrane spanning hydrophobic region.;gbkey=CDS;gene=SCE126.11;product=hypothetical protein;protein_id=NP_627600.1;transl_table=11
NC_003888.3	RefSeq	gene	3757393	3759117	.	+	.	ID=gene3419;Dbxref=GeneID:1098831;Name=SCE126.12;gbkey=Gene;gene=SCE126.12;gene_biotype=protein_coding;gene_synonym=SCE126.12,SCE9.01;locus_tag=SCO3394
NC_003888.3	RefSeq	CDS	3757393	3759117	.	+	0	ID=cds3352;Parent=gene3419;Dbxref=Genbank:NP_733603.1,GeneID:1098831;Name=NP_733603.1;Note=SCE9.01%2C hypothetical protein%2C partial CDS%2C len: >436 aa%3B unknown function%2C this is the remainder of CDS SCE126.12 (EMBL:AL049630). Weakly similar to TR:O33222 (EMBL:Z98260) Mycobacterium tuberculosis hypothetical protein (487 aa)%2C fasta scores%3B opt: 203 z-score: 237.4 E(): 6.7e-06%2C 30.3%25 identity in 347 aa overlap. Contains hydrophobic membrane spanning region and contains probable coiled-coil from 394 to 429 (36 residues) (Max score: 1.471%2C probability 0.91)~SCE126.12%2C partial CDS%2C unknown%2C proline-rich%2C len: >174aa;gbkey=CDS;gene=SCE126.12;product=hypothetical protein;protein_id=NP_733603.1;transl_table=11
NC_003888.3	RefSeq	gene	3759147	3760322	.	-	.	ID=gene3420;Dbxref=GeneID:1098832;Name=SCE9.02c;gbkey=Gene;gene=SCE9.02c;gene_biotype=protein_coding;gene_synonym=SCE9.02c;locus_tag=SCO3395
NC_003888.3	RefSeq	CDS	3759147	3760322	.	-	0	ID=cds3353;Parent=gene3420;Dbxref=Genbank:NP_627601.1,GeneID:1098832;Name=NP_627601.1;Note=SCE9.02c%2C hypothetical protein%2C len: 391 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Hydrophobic region at N-terminus and degenerate E(T/A)(P/R)EQ repeat in centre. Contains probable coiled-coil from 45 to 114 (70 residues) (Max score: 1.834%2C probability 1.00). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE9.02c;product=hypothetical protein;protein_id=NP_627601.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3759877	3759905	.	-	.	ID=id4252;Dbxref=GeneID:1098832;Note=2x degenerate 15 bp direct repeats;gbkey=repeat_region;gene=SCE9.02c
NC_003888.3	RefSeq	repeat_region	3759906	3759936	.	-	.	ID=id4253;Dbxref=GeneID:1098832;Note=2x degenerate 15 bp direct repeats;gbkey=repeat_region;gene=SCE9.02c
NC_003888.3	RefSeq	gene	3760573	3761706	.	-	.	ID=gene3421;Dbxref=GeneID:1098833;Name=SCE9.03c;gbkey=Gene;gene=SCE9.03c;gene_biotype=protein_coding;gene_synonym=SCE9.03c;locus_tag=SCO3396
NC_003888.3	RefSeq	CDS	3760573	3761706	.	-	0	ID=cds3354;Parent=gene3421;Dbxref=Genbank:NP_627602.1,GeneID:1098833;Name=NP_627602.1;Note=SCE9.03c%2C possible membrane protein%2C len: 370 aa%3B unknown function%2C similar to SW:YLI2_CORGL (EMBL:X60312) Corynebacterium glutamicum hypothetical protein (426 aa)%2C fasta scores%3B opt: 274 z-score: 307.1 E(): 8.8e-10%2C 23.9%25 identity in 351 aa overlap and TR:P94973 (EMBL:Z85982) Mycobacterium tuberculosis hypothetical protein (489 aa) (23.1%25 identity in 386 aa overlap). Contains hydrophobic regions at N-terminus%2C possibly a membrane anchor;gbkey=CDS;gene=SCE9.03c;product=hypothetical protein;protein_id=NP_627602.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3761863	3761866	.	+	.	ID=id4254;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3761869	3763674	.	+	.	ID=gene3422;Dbxref=GeneID:1098834;Name=SCE9.04;gbkey=Gene;gene=SCE9.04;gene_biotype=protein_coding;gene_synonym=SCE9.04;locus_tag=SCO3397
NC_003888.3	RefSeq	CDS	3761869	3763674	.	+	0	ID=cds3355;Parent=gene3422;Dbxref=Genbank:NP_627603.1,GeneID:1098834;Name=NP_627603.1;Note=SCE9.04%2C possible integral membrane lysyl-tRNA synthetase%2C len: 601 aa%3B unknown function%2C similar to hypothetical proteins e.g. N-terminal half of SW:P94974 (SYK2_MYCTU) Mycobacterium tuberculosis probable lysyl-tRNA synthetase (1172 aa)%2C fasta scores%3B opt: 1245 z-score: 1445.4 E(): 0%2C 39.9%25 identity in 604 aa overlap and TR:O69916 (EMBL:AL023861) S.coelicolor integral membrane protein (589 aa) (45.8%25 identity in 539 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCE9.04;product=integral membrane lysyl-tRNA synthetase;protein_id=NP_627603.1;transl_table=11
NC_003888.3	RefSeq	gene	3764143	3765009	.	+	.	ID=gene3423;Dbxref=GeneID:1098835;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;gene_synonym=folP,SCE9.05;locus_tag=SCO3398
NC_003888.3	RefSeq	CDS	3764143	3765009	.	+	0	ID=cds3356;Parent=gene3423;Dbxref=Genbank:NP_627604.1,GeneID:1098835;Name=NP_627604.1;Note=SCE9.05%2C folP%2C probable dihydropteroate synthase%2C len: 288 aa%3B similar to many e.g. SW:DHPS_ECOLI (EMBL:X68776)%2C FolP%2C Escherichia coli dihydropteroate synthase (282 aa)%2C fasta scores%3B opt: 618 z-score: 694.3 E(): 2.4e-31%2C 39.9%25 identity in 268 aa overlap. Contains Pfam match to entry PF00809 DHPS%2C Dihydropteroate synthase%2C score 418.00%2C E-value 8.9e-122%2C PS00792 Dihydropteroate synthase signature 1 and PS00793 Dihydropteroate synthase signature 2;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=NP_627604.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3764209	3764256	.	+	.	ID=id4255;Dbxref=GeneID:1098835;Note=PS00792 Dihydropteroate synthase signature 1;gbkey=misc_feature;gene=folP
NC_003888.3	RefSeq	sequence_feature	3764212	3764991	.	+	.	ID=id4256;Dbxref=GeneID:1098835;Note=Pfam match to entry PF00809 DHPS%2C Dihydropteroate synthase%2C score 418.00%2C E-value 8.9e-122;gbkey=misc_feature;gene=folP
NC_003888.3	RefSeq	sequence_feature	3764311	3764352	.	+	.	ID=id4257;Dbxref=GeneID:1098835;Note=PS00793 Dihydropteroate synthase signature 2;gbkey=misc_feature;gene=folP
NC_003888.3	RefSeq	gene	3765006	3765509	.	+	.	ID=gene3424;Dbxref=GeneID:1098836;Name=SCE9.06;gbkey=Gene;gene=SCE9.06;gene_biotype=protein_coding;gene_synonym=SCE9.06;locus_tag=SCO3399
NC_003888.3	RefSeq	CDS	3765006	3765509	.	+	0	ID=cds3357;Parent=gene3424;Dbxref=Genbank:NP_627605.1,GeneID:1098836;Name=NP_627605.1;Note=SCE9.06%2C hypothetical protein%2C len: 167 aa%3B probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCE9.06;product=hypothetical protein;protein_id=NP_627605.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3765801	3765805	.	+	.	ID=id4258;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3765814	3766173	.	+	.	ID=gene3425;Dbxref=GeneID:1098837;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;gene_synonym=folB,SCE9.07;locus_tag=SCO3400
NC_003888.3	RefSeq	CDS	3765814	3766173	.	+	0	ID=cds3358;Parent=gene3425;Dbxref=Genbank:NP_627606.1,GeneID:1098837;Name=NP_627606.1;Note=SCE9.07%2C folB%2C probable dihydroneopterin aldolase%2C len: 119 aa%3B similar to many e.g. the N-terminal%2C dihydroneopterin aldolase domain of SW:SULD_STRPN (EMBL:U16156)%2C sulD%2C Streptococcus pneumoniae bifunctional dihydroneopterin aldolase/hydroxymethyldihydropterin pyrophosphokinase (270 aa)%2C fasta scores%3B opt: 240 z-score: 310.8 E(): 5.5e-10%2C 31.9%25 identity in 119 aa overlap.  start codon suggested by GC frame plot and the presence of a potential RBS;gbkey=CDS;gene=folB;product=dihydroneopterin aldolase;protein_id=NP_627606.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3766160	3766163	.	+	.	ID=id4259;Dbxref=GeneID:1098837;Note=possible RBS;gbkey=RBS;gene=folB
NC_003888.3	RefSeq	gene	3766170	3766781	.	+	.	ID=gene3426;Dbxref=GeneID:1098838;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;gene_synonym=folK,SCE9.08;locus_tag=SCO3401
NC_003888.3	RefSeq	CDS	3766170	3766781	.	+	0	ID=cds3359;Parent=gene3426;Dbxref=Genbank:NP_627607.1,GeneID:1098838;Name=NP_627607.1;Note=SCE9.08%2C folK%2C probable hydroxymethyldihydropteridine pyrophosphokinase%2C len: 203 aa%3B similar to many e.g. SW:HPPK_ECOLI (EMBL:L06495)%2C FolK%2C Escherichia coli 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (158 aa)%2C fasta scores%3B opt: 351 z-score: 426.9 E(): 1.9e-16%2C 42.0%25 identity in 138 aa overlap.  start codon suggested by GC frame plot and the presence of a potential RBS%2C resulting in a short N-terminal extension not present in homologs. There is an alternative start codon at position 17. Contains Pfam match to entry PF01288 HPPK%2C 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)%2C score 145.80%2C E-value 7.5e-40;gbkey=CDS;gene=folK;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=NP_627607.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3766272	3766733	.	+	.	ID=id4260;Dbxref=GeneID:1098838;Note=Pfam match to entry PF01288 HPPK%2C 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)%2C score 145.80%2C E-value 7.5e-40;gbkey=misc_feature;gene=folK
NC_003888.3	RefSeq	gene	3766852	3767340	.	+	.	ID=gene3427;Dbxref=GeneID:1098839;Name=SCE9.09;gbkey=Gene;gene=SCE9.09;gene_biotype=protein_coding;gene_synonym=SCE9.09;locus_tag=SCO3402
NC_003888.3	RefSeq	CDS	3766852	3767340	.	+	0	ID=cds3360;Parent=gene3427;Dbxref=Genbank:NP_627608.1,GeneID:1098839;Name=NP_627608.1;Note=SCE9.09%2C possible hypothetical protein%2C len: 162 aa%3B unknown function%2C similar to TR:O06277 (EMBL:Z95557) Mycobacterium tuberculosis hypothetical protein (158 aa)%2C fasta scores%3B opt: 174 z-score: 218.1 E(): 7.9e-05%2C 31.3%25 identity in 128 aa overlap. Hydrophobic protein containing possible N-terminal signal sequence;gbkey=CDS;gene=SCE9.09;product=hypothetical protein;protein_id=NP_627608.1;transl_table=11
NC_003888.3	RefSeq	gene	3767356	3767961	.	-	.	ID=gene3428;Dbxref=GeneID:1098840;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;gene_synonym=SCE9.10c;locus_tag=SCO3403
NC_003888.3	RefSeq	CDS	3767356	3767961	.	-	0	ID=cds3361;Parent=gene3428;Dbxref=Genbank:NP_627609.1,GeneID:1098840;Name=NP_627609.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase I;protein_id=NP_627609.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3767362	3767907	.	-	.	ID=id4261;Dbxref=GeneID:1098840;Note=Pfam match to entry PF01227 GTP_cyclohydroI%2C GTP cyclohydrolase I%2C score 351.80%2C E-value 7.2e-102;gbkey=misc_feature;gene=folE
NC_003888.3	RefSeq	sequence_feature	3767551	3767583	.	-	.	ID=id4262;Dbxref=GeneID:1098840;Note=PS00860 GTP cyclohydrolase I signature 2;gbkey=misc_feature;gene=folE
NC_003888.3	RefSeq	sequence_feature	3767683	3767733	.	-	.	ID=id4263;Dbxref=GeneID:1098840;Note=PS00859 GTP cyclohydrolase I signature 1;gbkey=misc_feature;gene=folE
NC_003888.3	RefSeq	gene	3768093	3770099	.	-	.	ID=gene3429;Dbxref=GeneID:1098841;Name=ftsH2;gbkey=Gene;gene=ftsH2;gene_biotype=protein_coding;gene_synonym=ftsH2,SCE9.11c;locus_tag=SCO3404
NC_003888.3	RefSeq	CDS	3768093	3770099	.	-	0	ID=cds3362;Parent=gene3429;Dbxref=Genbank:NP_627610.1,GeneID:1098841;Name=NP_627610.1;Note=SCE9.11c%2C ftsH2%2C cell division protein ftsH homolog%2C len: 668 aa%3B similar to many e.g. SW:FTSH_ECOLI (EMBL:M83138)%2C ftsH%2C Escherichia coli membrane-bound%2C ATP-dependent protease involved in cell cycle control (644 aa)%2C fasta scores%3B opt: 1921 z-score: 1987.4 E(): 0%2C 48.5%25 identity in 641 aa overlap. Similar to TR:O69875 (EMBL:AL023797)%2C ftsH%2C S.coelicolor cell division protein ftsH homolog (648 aa) (43.3%25 identity in 610 aa overlap)%2C but lacking the proline-rich N-terminus. Contains a hydrophobic%2C possible membrane-spanning region near the N-terminus. Contains Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA)%2C score 335.00%2C E-value 8.4e-97%2C PS00674 AAA-protein family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=ftsH2;product=cell division protein FtsH-like protein;protein_id=NP_627610.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3768954	3769517	.	-	.	ID=id4264;Dbxref=GeneID:1098841;Note=Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA)%2C score 335.00%2C E-value 8.4e-97;gbkey=misc_feature;gene=ftsH2
NC_003888.3	RefSeq	sequence_feature	3769149	3769205	.	-	.	ID=id4265;Dbxref=GeneID:1098841;Note=PS00674 AAA-protein family signature;gbkey=misc_feature;gene=ftsH2
NC_003888.3	RefSeq	sequence_feature	3769479	3769502	.	-	.	ID=id4266;Dbxref=GeneID:1098841;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ftsH2
NC_003888.3	RefSeq	gene	3770329	3770892	.	-	.	ID=gene3430;Dbxref=GeneID:1098842;Name=hprT;gbkey=Gene;gene=hprT;gene_biotype=protein_coding;gene_synonym=hprT,SCE9.12c;locus_tag=SCO3405
NC_003888.3	RefSeq	CDS	3770329	3770892	.	-	0	ID=cds3363;Parent=gene3430;Dbxref=Genbank:NP_627611.1,GeneID:1098842;Name=NP_627611.1;Note=SCE9.12c%2C hprT%2C probable hypoxanthine phosphoribosyltransferase%2C len: 187 aa%3B similar to many e.g. TR:O33799 (EMBL:AF008931)%2C HprT%2C Salmonella typhimurium hypoxanthine phosphoribosyltransferase (178 aa)%2C fasta scores%3B opt: 583 z-score: 711.2 E(): 2.7e-32%2C 54.2%25 identity in 166 aa overlap. The start codon is uncertain as there are 5 potential. Contains Pfam match to entry PF00156 Pribosyltran%2C Purine/pyrimidine phosphoribosyl transferases%2C score 177.70%2C E-value 1.9e-49 and PS00103 Purine/pyrimidine phosphoribosyl transferases signature. Contains probable coiled-coil from 3 to 39 (37 residues) (Max score: 1.481%2C probability 0.93);gbkey=CDS;gene=hprT;product=hypoxanthine phosphoribosyltransferase;protein_id=NP_627611.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3770332	3770868	.	-	.	ID=id4267;Dbxref=GeneID:1098842;Note=Pfam match to entry PF00156 Pribosyltran%2C Purine/pyrimidine phosphoribosyl transferases%2C score 177.70%2C E-value 1.9e-49;gbkey=misc_feature;gene=hprT
NC_003888.3	RefSeq	sequence_feature	3770551	3770589	.	-	.	ID=id4268;Dbxref=GeneID:1098842;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature;gbkey=misc_feature;gene=hprT
NC_003888.3	RefSeq	gene	3770964	3772022	.	-	.	ID=gene3431;Dbxref=GeneID:1098843;Name=SCE9.13c;gbkey=Gene;gene=SCE9.13c;gene_biotype=protein_coding;gene_synonym=SCE9.13c;locus_tag=SCO3406
NC_003888.3	RefSeq	CDS	3770964	3772022	.	-	0	ID=cds3364;Parent=gene3431;Dbxref=Genbank:NP_627612.1,GeneID:1098843;Name=NP_627612.1;Note=SCE9.13c%2C conserved hypothetical protein%2C len: 352 aa%3B similar to many e.g. SW:MESJ_ECOLI (EMBL:D49445)%2C mesJ%2C Escherichia coli cell cycle protein (432 aa)%2C fasta scores%3B opt: 327 z-score: 356.8 E(): 1.5e-12%2C 34.4%25 identity in 282 aa overlap. Highly similar to SW:YZC5_MYCTU (EMBL:Z95436) Mycobacterium tuberculosis hypothetical protein (323 aa) (47.9%25 identity in 305 aa overlap);gbkey=CDS;gene=SCE9.13c;product=hypothetical protein;protein_id=NP_627612.1;transl_table=11
NC_003888.3	RefSeq	gene	3772215	3773342	.	-	.	ID=gene3432;Dbxref=GeneID:1098844;Name=SCE9.14c;gbkey=Gene;gene=SCE9.14c;gene_biotype=protein_coding;gene_synonym=SCE9.14c;locus_tag=SCO3407
NC_003888.3	RefSeq	CDS	3772215	3773342	.	-	0	ID=cds3365;Parent=gene3432;Dbxref=Genbank:NP_627613.1,GeneID:1098844;Name=NP_627613.1;Note=SCE9.14c%2C conserved hypothetical protein%2C len: 375 aa%3B unknown function%2C highly similar to TR:O06381 (EMBL:Z95436) Mycobacterium tuberculosis hypothetical protein (350 aa)%2C fasta scores%3B opt: 720 z-score: 820.9 E(): 0%2C 41.6%25 identity in 361 aa overlap and similar to TR:O53341 (EMBL:AL021646) Mycobacterium tuberculosis hypothetical protein (472 aa) (25.6%25 identity in 383 aa overlap) and TR:Q49746 (EMBL:U00016) Mycobacterium leprae hypothetical protein (479 aa) (24.9%25 identity in 305 aa overlap);gbkey=CDS;gene=SCE9.14c;product=hypothetical protein;protein_id=NP_627613.1;transl_table=11
NC_003888.3	RefSeq	gene	3773464	3774843	.	-	.	ID=gene3433;Dbxref=GeneID:1098845;Name=SCE9.15c;gbkey=Gene;gene=SCE9.15c;gene_biotype=protein_coding;gene_synonym=SCE9.15c;locus_tag=SCO3408
NC_003888.3	RefSeq	CDS	3773464	3774843	.	-	0	ID=cds3366;Parent=gene3433;Dbxref=Genbank:NP_627614.1,GeneID:1098845;Name=NP_627614.1;Note=SCE9.15c%2C possible penicillin-binding protein%2C len: 459 aa%3B weakly similar to penicillin-binding proteins e.g. SW:DAC_ACTSP (EMBL:X64790)%2C dac%2C Actinomadura sp. D-alanyl-D-alanine carboxypeptidase precursor (538 aa)%2C fasta scores%3B opt: 248 z-score: 243.2 E(): 3.2e-06%2C 29.5%25 identity in 499 aa overlap and TR:O85665 (EMBL:AF071224)%2C pbp3%2C Neisseria gonorrhoeae penicillin binding protein 3 (469 aa) (26.8%25 identity in 399 aa overlap). Similar to SC9B2.18c (EMBL:AL035212) S.coelicolor probable carboxypeptidase (451 aa) (36.1%25 identity in 429 aa overlap). The start codon is uncertain as there are 2 potential;gbkey=CDS;gene=SCE9.15c;product=hypothetical protein;protein_id=NP_627614.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3775132	3775136	.	+	.	ID=id4269;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3775145	3775636	.	+	.	ID=gene3434;Dbxref=GeneID:1098846;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;gene_synonym=ppa,SCE9.16;locus_tag=SCO3409
NC_003888.3	RefSeq	CDS	3775145	3775636	.	+	0	ID=cds3367;Parent=gene3434;Dbxref=Genbank:NP_627615.1,GeneID:1098846;Name=NP_627615.1;Note=SCE9.16%2C ppa%2C probable inorganic pyrophosphatase%2C len: 163 aa%3B similar to many e.g. SW:IPYR_SULAC (EMBL:X81842)%2C ppa%2C Sulfolobus acidocaldarius inorganic pyrophosphatase (173 aa)%2C fasta scores%3B opt: 483 z-score: 617.4 E(): 4.6e-27%2C 46.4%25 identity in 166 aa overlap. Contains Pfam match to entry PF00719 Pyrophosphatase%2C Inorganic pyrophosphatase%2C score 163.70%2C E-value 3e-45 and PS00387 Inorganic pyrophosphatase signature;gbkey=CDS;gene=ppa;product=inorganic pyrophosphatase;protein_id=NP_627615.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3775154	3775621	.	+	.	ID=id4270;Dbxref=GeneID:1098846;Note=Pfam match to entry PF00719 Pyrophosphatase%2C Inorganic pyrophosphatase%2C score 163.70%2C E-value 3e-45;gbkey=misc_feature;gene=ppa
NC_003888.3	RefSeq	sequence_feature	3775298	3775318	.	+	.	ID=id4271;Dbxref=GeneID:1098846;Note=PS00387 Inorganic pyrophosphatase signature;gbkey=misc_feature;gene=ppa
NC_003888.3	RefSeq	gene	3775723	3777459	.	+	.	ID=gene3435;Dbxref=GeneID:1098847;Name=SCE9.17;gbkey=Gene;gene=SCE9.17;gene_biotype=protein_coding;gene_synonym=SCE9.17;locus_tag=SCO3410
NC_003888.3	RefSeq	CDS	3775723	3777459	.	+	0	ID=cds3368;Parent=gene3435;Dbxref=Genbank:NP_627616.1,GeneID:1098847;Name=NP_627616.1;Note=SCE9.17%2C possible membrane protein%2C len: 578 aa%3B similar to TR:O69704 (EMBL:AL022121) Mycobacterium tuberculosis membrane protein (529 aa)%2C fasta scores%3B opt: 642 z-score: 677.3 E(): 2.1e-30%2C 31.6%25 identity in 481 aa overlap. The start codon is uncertain as there are 2 potential. The general position of the CDS start was estimated by GC frame plot. Contains hydrophobic%2C possible membrane-spanning regions in the C-terminal half%2C while the N-terminal half is more hydrophilic;gbkey=CDS;gene=SCE9.17;product=hypothetical protein;protein_id=NP_627616.1;transl_table=11
NC_003888.3	RefSeq	gene	3777456	3778367	.	-	.	ID=gene3436;Dbxref=GeneID:1098848;Name=SCE9.18c;gbkey=Gene;gene=SCE9.18c;gene_biotype=protein_coding;gene_synonym=SCE9.18c;locus_tag=SCO3411
NC_003888.3	RefSeq	CDS	3777456	3778367	.	-	0	ID=cds3369;Parent=gene3436;Dbxref=Genbank:NP_627617.1,GeneID:1098848;Name=NP_627617.1;Note=SCE9.18c%2C possible membrane protein%2C len: 303 aa%3B similar to many hypothetical proteins e.g. SW:DEDA_ECOLI (EMBL:M68934)%2C dedA%2C Escherichia coli hypothetical protein in hisT-purF region (219 aa)%2C fasta scores%3B opt: 588 z-score: 585.6 E(): 2.7e-25%2C 49.7%25 identity in 187 aa overlap. Similar to others from S.coelicolor e.g. TR:O86627 (EMBL:AL031155) DedA family hypothetical protein (228 aa) (41.4%25 identity in 203 aa overlap). Central region contains hydrophobic%2C possible membrane spans and C-terminal region contains glutamine-rich repeats. Contains Pfam match to entry PF00597 DedA%2C DedA family%2C score 104.00%2C E-value 2.9e-27;gbkey=CDS;gene=SCE9.18c;product=hypothetical protein;protein_id=NP_627617.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3777498	3777548	.	-	.	ID=id4272;Dbxref=GeneID:1098848;Note=imperfect 51 bp direct repeat;gbkey=repeat_region;gene=SCE9.18c
NC_003888.3	RefSeq	repeat_region	3777582	3777632	.	-	.	ID=id4273;Dbxref=GeneID:1098848;Note=imperfect 51 bp direct repeat;gbkey=repeat_region;gene=SCE9.18c
NC_003888.3	RefSeq	sequence_feature	3777810	3778301	.	-	.	ID=id4274;Dbxref=GeneID:1098848;Note=Pfam match to entry PF00597 DedA%2C DedA family%2C score 104.00%2C E-value 2.9e-27;gbkey=misc_feature;gene=SCE9.18c
NC_003888.3	RefSeq	gene	3778548	3778868	.	+	.	ID=gene3437;Dbxref=GeneID:1098849;Name=SCE9.19;gbkey=Gene;gene=SCE9.19;gene_biotype=protein_coding;gene_synonym=SCE9.19;locus_tag=SCO3412
NC_003888.3	RefSeq	CDS	3778548	3778868	.	+	0	ID=cds3370;Parent=gene3437;Dbxref=Genbank:NP_627618.1,GeneID:1098849;Name=NP_627618.1;Note=SCE9.19%2C conserved hypothetical protein%2C len: 106 aa%3B unknown function%2C weakly similar to e.g. TR:O26644 (EMBL:AE000837) Methanobacterium thermoautotrophicum hypothetical protein (127 aa)%2C fasta scores%3B opt: 338 z-score: 369.7 E(): 2.9e-13%2C 50.5%25 identity in 107 aa overlap;gbkey=CDS;gene=SCE9.19;product=hypothetical protein;protein_id=NP_627618.1;transl_table=11
NC_003888.3	RefSeq	gene	3778914	3779675	.	-	.	ID=gene3438;Dbxref=GeneID:1098850;Name=SCE9.20;gbkey=Gene;gene=SCE9.20;gene_biotype=protein_coding;gene_synonym=SCE9.20,tipA;locus_tag=SCO3413
NC_003888.3	RefSeq	CDS	3778914	3779675	.	-	0	ID=cds3371;Parent=gene3438;Dbxref=Genbank:NP_627619.1,GeneID:1098850;Name=NP_627619.1;Note=SCE9.20c%2C tipA%2C transcriptional regulator%2C len: 253 aa%3B highly similar to many e.g. SW:TIPA_STRLI (EMBL:S64314)%2C TipA%2C Streptomyces lividans thiostrepton-binding transcriptional activator (253 aa)%2C fasta scores%3B opt: 1693 z-score: 1909.7 E(): 0%2C 99.6%25 identity in 253 aa overlap. Weakly similar to others from S. coelicolor e.g. TR:O54191 (EMBL:AL021411) probable transcriptional regulator (196 aa) (29.8%25 identity in 181 aa overlap). Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 66.50%2C E-value 5.7e-1 and PS00552 Bacterial regulatory proteins%2C merR family signature. Contains probable coiled-coil from 77 to 107 (31 residues) (Max score: 1.523%2C probability 0.97);gbkey=CDS;gene=SCE9.20;product=transcriptional regulator;protein_id=NP_627619.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3779553	3779660	.	-	.	ID=id4275;Dbxref=GeneID:1098850;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 66.50%2C E-value 5.7e-16;gbkey=misc_feature;gene=SCE9.20
NC_003888.3	RefSeq	sequence_feature	3779592	3779660	.	-	.	ID=id4276;Dbxref=GeneID:1098850;Note=PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=misc_feature;gene=SCE9.20
NC_003888.3	RefSeq	gene	3779785	3780231	.	-	.	ID=gene3439;Dbxref=GeneID:1098851;Name=SCE9.21c;gbkey=Gene;gene=SCE9.21c;gene_biotype=protein_coding;gene_synonym=SCE9.21c;locus_tag=SCO3414
NC_003888.3	RefSeq	CDS	3779785	3780231	.	-	0	ID=cds3372;Parent=gene3439;Dbxref=Genbank:NP_627620.1,GeneID:1098851;Name=NP_627620.1;Note=SCE9.21c%2C possible transcriptional regulator%2C len: 148 aa%3B weakly similar to TR:P71885 (EMBL:Z79702) Mycobacterium tuberculosis hypothetical protein (163 aa)%2C fasta scores%3B opt: 166 z-score: 220.3 E(): 6e-05%2C 29.5%25 identity in 139 aa overlap and TR:O34949 (EMBL:AJ002571)%2C ykoM%2C Bacillus subtilis hypothetical protein (154 aa) (27.0%25 identity in 141 aa overlap). Contains Pfam match to entry PF01047 MarR%2C MarR family%2C score 71.50%2C E-value 1.8e-17;gbkey=CDS;gene=SCE9.21c;product=transcriptional regulator;protein_id=NP_627620.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3779827	3780138	.	-	.	ID=id4277;Dbxref=GeneID:1098851;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 71.50%2C E-value 1.8e-17;gbkey=misc_feature;gene=SCE9.21c
NC_003888.3	RefSeq	gene	3780468	3781268	.	+	.	ID=gene3440;Dbxref=GeneID:1098852;Name=SCE9.22;gbkey=Gene;gene=SCE9.22;gene_biotype=protein_coding;gene_synonym=SCE9.22;locus_tag=SCO3415
NC_003888.3	RefSeq	CDS	3780468	3781268	.	+	0	ID=cds3373;Parent=gene3440;Dbxref=Genbank:NP_627621.1,GeneID:1098852;Name=NP_627621.1;Note=SCE9.22%2C probable esterase%2C len: 266 aa%3B similar to many e.g. SW:BAH_STRHY (EMBL:M64783)%2C bah%2C Streptomyces hygroscopicus acetyl-hydrolase in bialaphos biosynthetic gene cluster (299 aa)%2C fasta scores%3B opt: 637 z-score: 678.5 E(): 1.8e-30%2C 45.3%25 identity in 236 aa overlap. Contains PS01173 Lipolytic enzymes 'G-D-X-G' family%2C  histidine active site;gbkey=CDS;gene=SCE9.22;product=esterase;protein_id=NP_627621.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3780546	3780596	.	+	.	ID=id4278;Dbxref=GeneID:1098852;Note=PS01173 Lipolytic enzymes 'G-D-X-G' family%2C  histidine active site;gbkey=misc_feature;gene=SCE9.22
NC_003888.3	RefSeq	gene	3781328	3782755	.	+	.	ID=gene3441;Dbxref=GeneID:1098853;Name=gad;gbkey=Gene;gene=gad;gene_biotype=protein_coding;gene_synonym=gad,SCE9.23;locus_tag=SCO3416
NC_003888.3	RefSeq	CDS	3781328	3782755	.	+	0	ID=cds3374;Parent=gene3441;Dbxref=Genbank:NP_627622.1,GeneID:1098853;Name=NP_627622.1;Note=SCE9.23%2C gad%2C probable glutamate decarboxylase%2C len: 475 aa%3B similar to many e.g. SW:DCEA_ECOLI (EMBL:M84024)%2C gadA%2C Escherichia coli glutamate decarboxylase alpha (466 aa)%2C fasta scores%3B opt: 1433 z-score: 1665.2 E(): 0%2C 50.0%25 identity in 426 aa overlap. Contains Pfam match to entry PF00282 pyridoxal_deC%2C Pyridoxal-dependent decarboxylase conserved domain%2C score 276.70%2C E-value 1.1e-79;gbkey=CDS;gene=gad;product=glutamate decarboxylase;protein_id=NP_627622.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3781460	3782452	.	+	.	ID=id4279;Dbxref=GeneID:1098853;Note=Pfam match to entry PF00282 pyridoxal_deC%2C Pyridoxal-dependent decarboxylase conserved domain%2C score 276.70%2C E-value 1.1e-79;gbkey=misc_feature;gene=gad
NC_003888.3	RefSeq	gene	3782903	3783685	.	-	.	ID=gene3442;Dbxref=GeneID:1098854;Name=SCE9.24c;gbkey=Gene;gene=SCE9.24c;gene_biotype=protein_coding;gene_synonym=SCE9.24c;locus_tag=SCO3417
NC_003888.3	RefSeq	CDS	3782903	3783685	.	-	0	ID=cds3375;Parent=gene3442;Dbxref=Genbank:NP_627623.1,GeneID:1098854;Name=NP_627623.1;Note=SCE9.24c%2C probable ABC transporter transmembrane component%2C len: 315 aa%3B similar to many e.g. SW:DRRB_STRPE (EMBL:M73758)%2C drrB%2C Streptomyces peucetius daunorubicin resistance transmembrane protein (283 aa)%2C fasta scores%3B opt: 507 z-score: 565.3 E(): 3.6e-24%2C 35.6%25 identity in 264 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCE9.24c;product=ABC transporter;protein_id=NP_627623.1;transl_table=11
NC_003888.3	RefSeq	gene	3783682	3784629	.	-	.	ID=gene3443;Dbxref=GeneID:1098855;Name=SCE9.25c;gbkey=Gene;gene=SCE9.25c;gene_biotype=protein_coding;gene_synonym=SCE9.25c;locus_tag=SCO3418
NC_003888.3	RefSeq	CDS	3783682	3784629	.	-	0	ID=cds3376;Parent=gene3443;Dbxref=Genbank:NP_627624.1,GeneID:1098855;Name=NP_627624.1;Note=SCE9.25c%2C probable ABC transporter ATP-binding component%2C len: 315 aa%3B similar to many e.g SW:DRRA_STRPE (EMBL:M73758)%2C drrA%2C Streptomyces peucetius daunorubicin resistance ATP-binding protein (330 aa)%2C fasta scores%3B opt: 942 z-score: 1020.6 E(): 0%2C 51.4%25 identity in 317 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 187.90%2C E-value 1.6e-52%2C PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCE9.25c;product=ABC transporter ATP-binding protein;protein_id=NP_627624.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3783690	3783695	.	-	.	ID=id4280;Dbxref=GeneID:1098855;Note=possible RBS;gbkey=RBS;gene=SCE9.25c
NC_003888.3	RefSeq	sequence_feature	3783988	3784533	.	-	.	ID=id4281;Dbxref=GeneID:1098855;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 187.90%2C E-value 1.6e-52;gbkey=misc_feature;gene=SCE9.25c
NC_003888.3	RefSeq	sequence_feature	3784171	3784215	.	-	.	ID=id4282;Dbxref=GeneID:1098855;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE9.25c
NC_003888.3	RefSeq	sequence_feature	3784489	3784512	.	-	.	ID=id4283;Dbxref=GeneID:1098855;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE9.25c
NC_003888.3	RefSeq	gene	3784717	3785358	.	-	.	ID=gene3444;Dbxref=GeneID:1098856;Name=SCE9.26c;gbkey=Gene;gene=SCE9.26c;gene_biotype=protein_coding;gene_synonym=SCE9.26c;locus_tag=SCO3419
NC_003888.3	RefSeq	CDS	3784717	3785358	.	-	0	ID=cds3377;Parent=gene3444;Dbxref=Genbank:NP_627625.1,GeneID:1098856;Name=NP_627625.1;Note=SCE9.26c%2C hypothetical protein%2C len: 213 aa%3B unknown function%2C weakly similar to TR:P7170 (EMBL:Z80775) Mycobacterium tuberculosis hypothetical protein (180 aa)%2C fasta scores%3B opt: 154 z-score: 195.5 E(): 0.0014%2C 27.0%25 identity in 178 aa overlap. The start codon is uncertain as there are 2 potential;gbkey=CDS;gene=SCE9.26c;product=hypothetical protein;protein_id=NP_627625.1;transl_table=11
NC_003888.3	RefSeq	gene	3785441	3786901	.	-	.	ID=gene3445;Dbxref=GeneID:1098857;Name=SCE9.27c;gbkey=Gene;gene=SCE9.27c;gene_biotype=protein_coding;gene_synonym=SCE9.27c;locus_tag=SCO3420
NC_003888.3	RefSeq	CDS	3785441	3786901	.	-	0	ID=cds3378;Parent=gene3445;Dbxref=Genbank:NP_627626.1,GeneID:1098857;Name=NP_627626.1;Note=SCE9.27c%2C probable aldehyde dehydrogenase%2C len: 486 aa%3B highly similar to many NAD-linked aldehyde dehydrogenases e.g. SW:XYLC_PSEPU (EMBL:U15151)%2C xylC%2C Pseudomonas putida benzaldehyde dehydrogenase [NAD+] from TOL plasmid pWW0 (487 aa)%2C fasta scores%3B opt: 1244 z-score: 1420.3 E(): 0%2C 41.5%25 identity in 479 aa overlap. Similar to others from S.coelicolor e.g. TR:O88069 (EMBL:AL031541) probable aldehyde dehydrogenase (483 aa) (40.0%25 identity in 448 aa overlap). Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase%2C score 491.30%2C E-value 7.6e-144%2C PS00687 Aldehyde dehydrogenases glutamic acid active site and PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=CDS;gene=SCE9.27c;product=aldehyde dehydrogenase;protein_id=NP_627626.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3785465	3786856	.	-	.	ID=id4284;Dbxref=GeneID:1098857;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase%2C score 491.30%2C E-value 7.6e-144;gbkey=misc_feature;gene=SCE9.27c
NC_003888.3	RefSeq	sequence_feature	3786026	3786061	.	-	.	ID=id4285;Dbxref=GeneID:1098857;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SCE9.27c
NC_003888.3	RefSeq	sequence_feature	3786122	3786145	.	-	.	ID=id4286;Dbxref=GeneID:1098857;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SCE9.27c
NC_003888.3	RefSeq	ribosome_entry_site	3786908	3786911	.	-	.	ID=id4287;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3786977	3787801	.	-	.	ID=gene3446;Dbxref=GeneID:1098858;Name=SCE9.28c;gbkey=Gene;gene=SCE9.28c;gene_biotype=protein_coding;gene_synonym=SCE9.28c;locus_tag=SCO3421
NC_003888.3	RefSeq	CDS	3786977	3787801	.	-	0	ID=cds3379;Parent=gene3446;Dbxref=Genbank:NP_627627.1,GeneID:1098858;Name=NP_627627.1;Note=SCE9.28c%2C hypothetical protein%2C len: 274 aa%3B similar others from S.coelicolor e.g. TR:O86719 (EMBL:AL031515)%2C SC5C7.22C%2C hypothetical protein (287 aa)%2C fasta scores%3B opt: 727 z-score: 871.9 E(): 0%2C 44.7%25 identity in 273 aa overlap;gbkey=CDS;gene=SCE9.28c;product=hypothetical protein;protein_id=NP_627627.1;transl_table=11
NC_003888.3	RefSeq	gene	3787911	3788114	.	-	.	ID=gene3447;Dbxref=GeneID:1098859;Name=SCE9.29c;gbkey=Gene;gene=SCE9.29c;gene_biotype=protein_coding;gene_synonym=SCE9.29c;locus_tag=SCO3422
NC_003888.3	RefSeq	CDS	3787911	3788114	.	-	0	ID=cds3380;Parent=gene3447;Dbxref=Genbank:NP_627628.1,GeneID:1098859;Name=NP_627628.1;Note=SCE9.29c%2C hypothetical protein%2C len: 67 aa%3B improbable CDS suggested by GC frame plot alone;gbkey=CDS;gene=SCE9.29c;product=hypothetical protein;protein_id=NP_627628.1;transl_table=11
NC_003888.3	RefSeq	gene	3788179	3788643	.	+	.	ID=gene3448;Dbxref=GeneID:1098860;Name=SCE9.30;gbkey=Gene;gene=SCE9.30;gene_biotype=protein_coding;gene_synonym=SCE9.30;locus_tag=SCO3423
NC_003888.3	RefSeq	CDS	3788179	3788643	.	+	0	ID=cds3381;Parent=gene3448;Dbxref=Genbank:NP_627629.1,GeneID:1098860;Name=NP_627629.1;Note=SCE9.30%2C possible regulator%2C len: 154 aa%3B similar to TR:Q53897 (EMBL:X60316)%2C AbaA%2C Streptomyces coelicolor ORFA from AbaA regulatory locus for antibiotic production (192 aa)%2C fasta scores%3B opt: 278 z-score: 352.7 E(): 2.5e-12%2C 39.9%25 identity in 148 aa overlap. Also similar to several S. coelicolor hypothetical proteins including the N-terminus of TR:O86807 (EMBL:AL031031)%2C SC7C7.02c%2C possible regulatory protein (916 aa) (35.0%25 identity in 137 aa overlap). Contains TTA (leucine) codon%2C possible target for bldA regulation%2C near N-terminus;gbkey=CDS;gene=SCE9.30;product=regulator;protein_id=NP_627629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3788191	3788193	.	+	.	ID=id4288;Dbxref=GeneID:1098860;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCE9.30
NC_003888.3	RefSeq	gene	3788692	3788943	.	-	.	ID=gene3449;Dbxref=GeneID:1098861;Name=SCE9.31c;gbkey=Gene;gene=SCE9.31c;gene_biotype=protein_coding;gene_synonym=SCE9.31c;locus_tag=SCO3424
NC_003888.3	RefSeq	CDS	3788692	3788943	.	-	0	ID=cds3382;Parent=gene3449;Dbxref=Genbank:NP_627630.1,GeneID:1098861;Name=NP_627630.1;Note=SCE9.31c%2C possible regulator%2C len: 83 aa%3B similar to TR:Q53896 (EMBL:X60316)%2C abaA%2C Streptomyces coelicolor ORFD from AbaA regulatory locus for antibiotic production (75 aa)%2C fasta scores%3B opt: 307 z-score: 422.3 E(): 3.4e-16%2C 64.9%25 identity in 74 aa overlap and to TR:Q53842 (EMBL:U28930)%2C BldB%2C S.coelicolor developmental protein (98 aa) (41.8%25 identity in 67 aa overlap);gbkey=CDS;gene=SCE9.31c;product=regulator;protein_id=NP_627630.1;transl_table=11
NC_003888.3	RefSeq	gene	3789248	3789487	.	-	.	ID=gene3450;Dbxref=GeneID:1098862;Name=rpsR2;gbkey=Gene;gene=rpsR2;gene_biotype=protein_coding;gene_synonym=rpsR2,SCE9.32c;locus_tag=SCO3425
NC_003888.3	RefSeq	CDS	3789248	3789487	.	-	0	ID=cds3383;Parent=gene3450;Dbxref=Genbank:NP_627631.1,GeneID:1098862;Name=NP_627631.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR2;product=30S ribosomal protein S18;protein_id=NP_627631.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3789266	3789427	.	-	.	ID=id4289;Dbxref=GeneID:1098862;Note=Pfam match to entry PF01084 Ribosomal_S18%2C Ribosomal protein S18%2C score 109.50%2C E-value 6.4e-29;gbkey=misc_feature;gene=rpsR2
NC_003888.3	RefSeq	sequence_feature	3789338	3789409	.	-	.	ID=id4290;Dbxref=GeneID:1098862;Note=PS00057 Ribosomal protein S18 signature;gbkey=misc_feature;gene=rpsR2
NC_003888.3	RefSeq	gene	3789569	3790681	.	-	.	ID=gene3451;Dbxref=GeneID:1098863;Name=SCE9.33c;gbkey=Gene;gene=SCE9.33c;gene_biotype=protein_coding;gene_synonym=SCE9.33c;locus_tag=SCO3426
NC_003888.3	RefSeq	CDS	3789569	3790681	.	-	0	ID=cds3384;Parent=gene3451;Dbxref=Genbank:NP_627632.1,GeneID:1098863;Name=NP_627632.1;Note=SCE9.33c%2C conserved hypothetical protein%2C len: 370 aa%3B similar to hypothetical proteins in Burkholderia%2C Mycobacterium tuberculosis and Bacillus subtilis. Similar to SW:P47K_PSECL (EMBL:D90216) Pseudomonas chlororaphis 47 kD protein critical for the expression of nitrile hydratase genes (419 aa)%2C fasta scores%3B opt: 374 z-score: 409.4 E(): 1.8e-15%2C 28.1%25 identity in 392 aa overlap;gbkey=CDS;gene=SCE9.33c;product=hypothetical protein;protein_id=NP_627632.1;transl_table=11
NC_003888.3	RefSeq	gene	3790678	3790932	.	-	.	ID=gene3452;Dbxref=GeneID:1098864;Name=rpmE2;gbkey=Gene;gene=rpmE2;gene_biotype=protein_coding;gene_synonym=rpmE,SCE9.34c;locus_tag=SCO3427
NC_003888.3	RefSeq	CDS	3790678	3790932	.	-	0	ID=cds3385;Parent=gene3452;Dbxref=Genbank:NP_627633.1,GeneID:1098864;Name=NP_627633.1;Note=RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE2;product=50S ribosomal protein L31;protein_id=NP_627633.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3790690	3790932	.	-	.	ID=id4291;Dbxref=GeneID:1098864;Note=Pfam match to entry PF01197 Ribosomal_L31%2C Ribosomal protein L31%2C score 59.20%2C E-value 8.7e-14;gbkey=misc_feature;gene=rpmE2
NC_003888.3	RefSeq	sequence_feature	3790714	3790770	.	-	.	ID=id4292;Dbxref=GeneID:1098864;Note=PS01143 Ribosomal protein L31 signature;gbkey=misc_feature;gene=rpmE2
NC_003888.3	RefSeq	gene	3790939	3791103	.	-	.	ID=gene3453;Dbxref=GeneID:1098865;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;gene_synonym=SCE9.35c;locus_tag=SCO3428
NC_003888.3	RefSeq	CDS	3790939	3791103	.	-	0	ID=cds3386;Parent=gene3453;Dbxref=Genbank:NP_627634.1,GeneID:1098865;Name=NP_627634.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=NP_627634.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3790942	3791085	.	-	.	ID=id4293;Dbxref=GeneID:1098865;Note=Pfam match to entry PF00471 Ribosomal_L33%2C Ribosomal protein L33%2C score 37.80%2C E-value 2e-08;gbkey=misc_feature;gene=rpmG
NC_003888.3	RefSeq	gene	3791176	3791412	.	+	.	ID=gene3454;Dbxref=GeneID:1098866;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;gene_synonym=SCE9.36;locus_tag=SCO3429
NC_003888.3	RefSeq	CDS	3791176	3791412	.	+	0	ID=cds3387;Parent=gene3454;Dbxref=Genbank:NP_627635.2,GeneID:1098866;Name=NP_627635.2;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=NP_627635.2;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3791191	3791364	.	+	.	ID=id4294;Dbxref=GeneID:1098866;Note=Pfam match to entry PF00830 Ribosomal_L28%2C Ribosomal L28 family%2C score 88.70%2C E-value 1.2e-22;gbkey=misc_feature;gene=rpmB
NC_003888.3	RefSeq	gene	3791412	3791717	.	+	.	ID=gene3455;Dbxref=GeneID:1098867;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;gene_synonym=SCE9.37;locus_tag=SCO3430
NC_003888.3	RefSeq	CDS	3791412	3791717	.	+	0	ID=cds3388;Parent=gene3455;Dbxref=Genbank:NP_627636.1,GeneID:1098867;Name=NP_627636.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=NP_627636.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3791412	3791714	.	+	.	ID=id4295;Dbxref=GeneID:1098867;Note=Pfam match to entry PF00253 Ribosomal_S14%2C Ribosomal protein S14%2C score 103.10%2C E-value 1.5e-30;gbkey=misc_feature;gene=rpsN
NC_003888.3	RefSeq	gene	3791719	3792453	.	+	.	ID=gene3456;Dbxref=GeneID:1098868;Name=SCE9.38;gbkey=Gene;gene=SCE9.38;gene_biotype=protein_coding;gene_synonym=SCE9.38;locus_tag=SCO3431
NC_003888.3	RefSeq	CDS	3791719	3792453	.	+	0	ID=cds3389;Parent=gene3456;Dbxref=Genbank:NP_627637.1,GeneID:1098868;Name=NP_627637.1;Note=SCE9.38%2C possible membrane protein%2C len: 244 aa%3B unknown function%2C contains a hydrophobic%2C possible membrane-spanning region. Contains PS00213 Lipocalin signature%2C so may be involved in transport of small%2C hydrophobic molecules;gbkey=CDS;gene=SCE9.38;product=hypothetical protein;protein_id=NP_627637.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3792130	3792168	.	+	.	ID=id4296;Dbxref=GeneID:1098868;Note=PS00213 Lipocalin signature;gbkey=misc_feature;gene=SCE9.38
NC_003888.3	RefSeq	gene	3792412	3793668	.	-	.	ID=gene3457;Dbxref=GeneID:1098869;Name=SCE9.39c;gbkey=Gene;gene=SCE9.39c;gene_biotype=protein_coding;gene_synonym=SCE9.39c;locus_tag=SCO3432
NC_003888.3	RefSeq	CDS	3792412	3793668	.	-	0	ID=cds3390;Parent=gene3457;Dbxref=Genbank:NP_627638.1,GeneID:1098869;Name=NP_627638.1;Note=SCE9.39c%2C hypothetical protein%2C len: 418 aa%3B unknown function%2C C-terminal end similar to TR:O07428 (EMBL:Z97050) Mycobacterium tuberculosis hypothetical protein (249 aa)%2C fasta scores%3B opt: 231 z-score: 252.5 E(): 9.7e-07%2C 30.4%25 identity in 270 aa overlap. Contains probable coiled-coil from 254 to 283 (30 residues) (Max score: 1.418%2C probability 0.78);gbkey=CDS;gene=SCE9.39c;product=hypothetical protein;protein_id=NP_627638.1;transl_table=11
NC_003888.3	RefSeq	gene	3793755	3794531	.	+	.	ID=gene3458;Dbxref=GeneID:1098870;Name=SCE9.40;gbkey=Gene;gene=SCE9.40;gene_biotype=protein_coding;gene_synonym=SCE9.40;locus_tag=SCO3433
NC_003888.3	RefSeq	CDS	3793755	3794531	.	+	0	ID=cds3391;Parent=gene3458;Dbxref=Genbank:NP_627639.1,GeneID:1098870;Name=NP_627639.1;Note=SCE9.40%2C conserved hypothetical protein%2C len: 258 aa%3B unknown function%2C C-terminus similar to N-terminal region of the clpC family of ATP-dependent Clp protease ATP-binding subunits e.g. TR:Q48760 (EMBL:U40604)%2C mec%2C Listeria monocytogenes clpC ATPase (825 aa)%2C fasta scores%3B opt: 272 z-score: 311.0 E(): 5.3e-10%2C 36.4%25 identity in 140 aa overlap. A hypothetical protein of similar length occurs in Mycobacterium tuberculosis%3B TR:P71964 (EMBL:Z80225) clpC family hypothetical protein (252 aa) (57.3%25 identity in 255 aa overlap). Contains probable helix-turn-helix motif at aa 62-83 (Score 1144%2C +3.08 SD);gbkey=CDS;gene=SCE9.40;product=hypothetical protein;protein_id=NP_627639.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3794538	3794654	.	+	.	ID=id4297;Note=approx. 10 x 15 bp degenerate direct repeats;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3794733	3796424	.	+	.	ID=gene3459;Dbxref=GeneID:1098871;Name=SCE36.01;gbkey=Gene;gene=SCE36.01;gene_biotype=protein_coding;gene_synonym=SCE36.01,SCE9.41;locus_tag=SCO3434
NC_003888.3	RefSeq	CDS	3794733	3796424	.	+	0	ID=cds3392;Parent=gene3459;Dbxref=Genbank:NP_733604.1,GeneID:1098871;Name=NP_733604.1;Note=SCE36.01%2C partial CDS%2C possible DNA polymerase I%2C len: >328 aa%3B similar to the C-terminal region many e.g. SW:DPO1_CHLAU DNA polymerase I from Chloroflexus aurantiacus (942 aa) fasta scores%3B opt: 287%2C z-score: 322.2%2C E(): 1.3e-10%2C (28.9%25 identity in 305 aa overlap). Contains two Pfam matches to entry PF00476 DNA_pol_A%2C DNA polymerase family A.~SCE9.41%2C hypothetical protein%2C partial CDS%2C len: >268 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCE36.01;product=DNA polymerase I;protein_id=NP_733604.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3795438	3795536	.	+	.	ID=id4298;Dbxref=GeneID:1098871;Note=overlap with S.coelicolor cosmid StE36 from 1 to 99 StE36;gbkey=misc_feature;gene=SCE36.01
NC_003888.3	RefSeq	sequence_feature	3795672	3795884	.	+	.	ID=id4299;Dbxref=GeneID:1098871;Note=Pfam match to entry PF00476 DNA_pol_A%2C DNA polymerase family A%2C score 37.60%2C E-value 1.7e-09.;gbkey=misc_feature;gene=SCE36.01
NC_003888.3	RefSeq	sequence_feature	3796104	3796298	.	+	.	ID=id4300;Dbxref=GeneID:1098871;Note=Pfam match to entry PF00476 DNA_pol_A%2C DNA polymerase family A%2C score 20.30%2C E-value 0.00012.;gbkey=misc_feature;gene=SCE36.01
NC_003888.3	RefSeq	gene	3796515	3797402	.	+	.	ID=gene3460;Dbxref=GeneID:1098872;Name=SCE36.02;gbkey=Gene;gene=SCE36.02;gene_biotype=protein_coding;gene_synonym=SCE36.02;locus_tag=SCO3435
NC_003888.3	RefSeq	CDS	3796515	3797402	.	+	0	ID=cds3393;Parent=gene3460;Dbxref=Genbank:NP_627640.1,GeneID:1098872;Name=NP_627640.1;Note=SCE36.02%2C probable transcriptional regulator%2C len: 295 aa%3B similar to many e.g. SW:GLTC_BACSU glutamate biosynthesis transcriptional regulator from Bacillus subtilis (300 aa) fasta scores%3B opt: 456%2C z-score: 520.3%2C E(): 1.2e-21%2C (31.9%25 identity in 288 aa overlap). Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix proteins%2C lysR family and Prosite match to PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=CDS;gene=SCE36.02;product=transcriptional regulator;protein_id=NP_627640.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3796521	3796940	.	+	.	ID=id4301;Dbxref=GeneID:1098872;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix proteins%2C lysR family%2C score 124.10%2C E-value 2.6e-33.;gbkey=misc_feature;gene=SCE36.02
NC_003888.3	RefSeq	sequence_feature	3796563	3796655	.	+	.	ID=id4302;Dbxref=GeneID:1098872;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=SCE36.02
NC_003888.3	RefSeq	gene	3797490	3799043	.	+	.	ID=gene3461;Dbxref=GeneID:1098873;Name=SCE36.03;gbkey=Gene;gene=SCE36.03;gene_biotype=protein_coding;gene_synonym=SCE36.03;locus_tag=SCO3436
NC_003888.3	RefSeq	CDS	3797490	3799043	.	+	0	ID=cds3394;Parent=gene3461;Dbxref=Genbank:NP_627641.1,GeneID:1098873;Name=NP_627641.1;Note=SCE36.03%2C possible fatty acid CoA ligase%2C len: 517 aa%3B similar to many eg. TR:O86483 (EMBL:AJ007932) acyl CoA ligase from Streptomyces argillaceus mithramycin biosynthesis cluster (514 aa) fasta scores%3B opt: 625%2C z-score: 678.0%2C E(): 1.9e-30%2C (32.7%25 identity in 513 aa overlap). Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and Prosite match to PS00455  AMP-binding domain signature.;gbkey=CDS;gene=SCE36.03;product=fatty acid CoA ligase;protein_id=NP_627641.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3797610	3798827	.	+	.	ID=id4303;Dbxref=GeneID:1098873;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 48.50%2C E-value 2.3e-17.;gbkey=misc_feature;gene=SCE36.03
NC_003888.3	RefSeq	sequence_feature	3798015	3798050	.	+	.	ID=id4304;Dbxref=GeneID:1098873;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=SCE36.03
NC_003888.3	RefSeq	gene	3799715	3800455	.	-	.	ID=gene3462;Dbxref=GeneID:1098874;Name=SCE36.04c;gbkey=Gene;gene=SCE36.04c;gene_biotype=protein_coding;gene_synonym=SCE36.04c;locus_tag=SCO3437
NC_003888.3	RefSeq	CDS	3799715	3800455	.	-	0	ID=cds3395;Parent=gene3462;Dbxref=Genbank:NP_627642.1,GeneID:1098874;Name=NP_627642.1;Note=SCE36.04c%2C possible integral membrane protein%2C len: 246aa%3B contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE36.04c;product=hypothetical protein;protein_id=NP_627642.1;transl_table=11
NC_003888.3	RefSeq	gene	3800452	3801675	.	-	.	ID=gene3463;Dbxref=GeneID:1098875;Name=SCE36.05c;gbkey=Gene;gene=SCE36.05c;gene_biotype=protein_coding;gene_synonym=SCE36.05c;locus_tag=SCO3438
NC_003888.3	RefSeq	CDS	3800452	3801675	.	-	0	ID=cds3396;Parent=gene3463;Dbxref=Genbank:NP_627643.1,GeneID:1098875;Name=NP_627643.1;Note=SCE36.05c%2C unknown%2C len: 407aa%3B contains a repeat region.;gbkey=CDS;gene=SCE36.05c;product=hypothetical protein;protein_id=NP_627643.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3800637	3801037	.	+	.	ID=id4305;Note=Single degenerate direct repeat.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3801757	3802629	.	+	.	ID=gene3464;Dbxref=GeneID:1098876;Name=SCE36.06;gbkey=Gene;gene=SCE36.06;gene_biotype=protein_coding;gene_synonym=SCE36.06;locus_tag=SCO3439
NC_003888.3	RefSeq	CDS	3801757	3802629	.	+	0	ID=cds3397;Parent=gene3464;Dbxref=Genbank:NP_627644.1,GeneID:1098876;Name=NP_627644.1;Note=SCE36.06%2C unknown%2C len: 290aa;gbkey=CDS;gene=SCE36.06;product=hypothetical protein;protein_id=NP_627644.1;transl_table=11
NC_003888.3	RefSeq	gene	3802689	3803408	.	+	.	ID=gene3465;Dbxref=GeneID:1098877;Name=SCE36.07;gbkey=Gene;gene=SCE36.07;gene_biotype=protein_coding;gene_synonym=SCE36.07;locus_tag=SCO3440
NC_003888.3	RefSeq	CDS	3802689	3803408	.	+	0	ID=cds3398;Parent=gene3465;Dbxref=Genbank:NP_627645.1,GeneID:1098877;Name=NP_627645.1;Note=SCE36.07%2C unknown%2C len: 239aa;gbkey=CDS;gene=SCE36.07;product=hypothetical protein;protein_id=NP_627645.1;transl_table=11
NC_003888.3	RefSeq	gene	3803405	3803974	.	+	.	ID=gene3466;Dbxref=GeneID:1098878;Name=SCE36.08;gbkey=Gene;gene=SCE36.08;gene_biotype=protein_coding;gene_synonym=SCE36.08;locus_tag=SCO3441
NC_003888.3	RefSeq	CDS	3803405	3803974	.	+	0	ID=cds3399;Parent=gene3466;Dbxref=Genbank:NP_627646.1,GeneID:1098878;Name=NP_627646.1;Note=SCE36.08%2C hypothetical protein%2C len: 189 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE36.08;product=hypothetical protein;protein_id=NP_627646.1;transl_table=11
NC_003888.3	RefSeq	gene	3804032	3804376	.	+	.	ID=gene3467;Dbxref=GeneID:1098879;Name=SCE36.09;gbkey=Gene;gene=SCE36.09;gene_biotype=protein_coding;gene_synonym=SCE36.09;locus_tag=SCO3442
NC_003888.3	RefSeq	CDS	3804032	3804376	.	+	0	ID=cds3400;Parent=gene3467;Dbxref=Genbank:NP_627647.1,GeneID:1098879;Name=NP_627647.1;Note=SCE36.09%2C unknown%2C len: 114aa;gbkey=CDS;gene=SCE36.09;product=hypothetical protein;protein_id=NP_627647.1;transl_table=11
NC_003888.3	RefSeq	gene	3804673	3806037	.	-	.	ID=gene3468;Dbxref=GeneID:1098880;Name=SCE36.10c;gbkey=Gene;gene=SCE36.10c;gene_biotype=protein_coding;gene_synonym=SCE36.10c;locus_tag=SCO3443
NC_003888.3	RefSeq	CDS	3804673	3806037	.	-	0	ID=cds3401;Parent=gene3468;Dbxref=Genbank:NP_627648.1,GeneID:1098880;Name=NP_627648.1;Note=SCE36.10c%2C probable pyridine nucleotide-disulphide oxidoreductase%2C len: 454 aa%3B similar to many eg. SW:MERA_STRLI mercuric reductase from Streptomyces lividans (474 aa) fasta scores%3B opt: 752%2C z-score: 772.0%2C E(): 0%2C (34.5%25 identity in 464 aa overlap). Contains Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase class-I.;gbkey=CDS;gene=SCE36.10c;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=NP_627648.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3804679	3806019	.	-	.	ID=id4306;Dbxref=GeneID:1098880;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase class-I%2C score 196.50%2C E-value 4.2e-55.;gbkey=misc_feature;gene=SCE36.10c
NC_003888.3	RefSeq	gene	3806179	3808032	.	-	.	ID=gene3469;Dbxref=GeneID:1098881;Name=SCE36.11c;gbkey=Gene;gene=SCE36.11c;gene_biotype=protein_coding;gene_synonym=SCE36.11c,SCE46.01c;locus_tag=SCO3444
NC_003888.3	RefSeq	CDS	3806179	3808032	.	-	0	ID=cds3402;Parent=gene3469;Dbxref=Genbank:NP_733605.1,GeneID:1098881;Name=NP_733605.1;Note=SCE46.01c%2C hypothetical protein (partial CDS)%2C len: >38 aa %3Bsimilar to TR:CAB52841 (EMBL:AL109848) Streptomyces coelicolor hypothetical 68.4 kD protein%3B fasta scores: opt: 152 z-score: 252.5 E(): 1e-06%3B 52.8%25 identity in 36 aa overlap~SCE36.11c%2C partial CDS%2C conserved hypothetical protein%2C len: 612aa%3B similar to TR:P71741 (EMBL:Z81368) hypothetical protein from Mycobacterium tuberculosis (642 aa) fasta scores%3B opt: 1283%2C z-score: 1479.1%2C E(): 0%2C (41.9%25 identity in 623 aa overlap) and SW:YAY3_SCHPO hypothetical protein from Schizosaccharomyces pombe (649 aa) fasta scores%3B opt: 883%2C z-score: 1017.4%2C E(): 0%2C (33.1%25 identity in 634 aa overlap).;gbkey=CDS;gene=SCE36.11c;product=hypothetical protein;protein_id=NP_733605.1;transl_table=11
NC_003888.3	RefSeq	gene	3808168	3808335	.	-	.	ID=gene3470;Dbxref=GeneID:1098882;Name=SCE46.02c;gbkey=Gene;gene=SCE46.02c;gene_biotype=protein_coding;gene_synonym=SCE46.02c;locus_tag=SCO3445
NC_003888.3	RefSeq	CDS	3808168	3808335	.	-	0	ID=cds3403;Parent=gene3470;Dbxref=Genbank:NP_627649.1,GeneID:1098882;Name=NP_627649.1;Note=SCE46.02c%2C small membrane protein%2C len: 55 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCE46.02c;product=small membrane protein;protein_id=NP_627649.1;transl_table=11
NC_003888.3	RefSeq	gene	3808429	3809106	.	-	.	ID=gene3471;Dbxref=GeneID:1098883;Name=SCE46.03c;gbkey=Gene;gene=SCE46.03c;gene_biotype=protein_coding;gene_synonym=SCE46.03c;locus_tag=SCO3446
NC_003888.3	RefSeq	CDS	3808429	3809106	.	-	0	ID=cds3404;Parent=gene3471;Dbxref=Genbank:NP_627650.1,GeneID:1098883;Name=NP_627650.1;Note=SCE46.03c%2C possible dehalogenase%2C len: 225 aa%3B similar to SW:HAD_PSESP (EMBL:S74078) Pseudomonas sp. (strain YL) 2-haloalkanoic acid dehalogenase (EC 3.8.1.2)%2C 232 aa%3B fasta scores: opt: 243 z-score: 288.1 E(): 1.1e-08%3B 23.5%25 identity in 217 aa overlap. Contins match to Pfam entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=SCE46.03c;product=dehalogenase;protein_id=NP_627650.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3808510	3809091	.	-	.	ID=id4307;Dbxref=GeneID:1098883;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 26.60%2C E-value 3.3e-05;gbkey=misc_feature;gene=SCE46.03c
NC_003888.3	RefSeq	ribosome_entry_site	3809112	3809115	.	-	.	ID=id4308;gbkey=RBS
NC_003888.3	RefSeq	gene	3809247	3809930	.	-	.	ID=gene3472;Dbxref=GeneID:1098884;Name=SCE46.04c;gbkey=Gene;gene=SCE46.04c;gene_biotype=protein_coding;gene_synonym=SCE46.04c;locus_tag=SCO3447
NC_003888.3	RefSeq	CDS	3809247	3809930	.	-	0	ID=cds3405;Parent=gene3472;Dbxref=Genbank:NP_627651.1,GeneID:1098884;Name=NP_627651.1;Note=SCE46.04c%2C possible transcriptional regulatory protein%2C len: 227 aa%3B similar to TR:O53922 (EMBL:AL022002) Mycobacterium tuberculosis hypothetical 26.8kD protein MTV047.10c%2C 244 aa%3B fasta scores: opt: 486 z-score: 603.1 E(): 3e-26%3B 40.5%25 identity in 220 aa overlap. Contains Pfam matches to entries PF00325 crp%2C Bacterial regulatory proteins%2C crp family and PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain. Contains a possible helix-turn-helix motif at residues 176..197 (+4.24 SD);gbkey=CDS;gene=SCE46.04c;product=transcriptional regulator;protein_id=NP_627651.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3809319	3809414	.	-	.	ID=id4309;Dbxref=GeneID:1098884;Note=Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family%2C score 17.70%2C E-value 0.00032;gbkey=misc_feature;gene=SCE46.04c
NC_003888.3	RefSeq	sequence_feature	3809547	3809825	.	-	.	ID=id4310;Dbxref=GeneID:1098884;Note=Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain%2C score 48.00%2C E-value 2.1e-10;gbkey=misc_feature;gene=SCE46.04c
NC_003888.3	RefSeq	gene	3809959	3810261	.	-	.	ID=gene3473;Dbxref=GeneID:1098885;Name=SCE46.05c;gbkey=Gene;gene=SCE46.05c;gene_biotype=protein_coding;gene_synonym=SCE46.05c;locus_tag=SCO3448
NC_003888.3	RefSeq	CDS	3809959	3810261	.	-	0	ID=cds3406;Parent=gene3473;Dbxref=Genbank:NP_627652.1,GeneID:1098885;Name=NP_627652.1;Note=SCE46.05c%2C unknown%2C len: 100 aa;gbkey=CDS;gene=SCE46.05c;product=hypothetical protein;protein_id=NP_627652.1;transl_table=11
NC_003888.3	RefSeq	gene	3810352	3810672	.	-	.	ID=gene3474;Dbxref=GeneID:1098886;Name=SCE46.06c;gbkey=Gene;gene=SCE46.06c;gene_biotype=protein_coding;gene_synonym=SCE46.06c;locus_tag=SCO3449
NC_003888.3	RefSeq	CDS	3810352	3810672	.	-	0	ID=cds3407;Parent=gene3474;Dbxref=Genbank:NP_627653.1,GeneID:1098886;Name=NP_627653.1;Note=SCE46.06c%2C unknown%2C len: 106 aa;gbkey=CDS;gene=SCE46.06c;product=hypothetical protein;protein_id=NP_627653.1;transl_table=11
NC_003888.3	RefSeq	gene	3810669	3811274	.	-	.	ID=gene3475;Dbxref=GeneID:1098887;Name=SCE46.07c;gbkey=Gene;gene=SCE46.07c;gene_biotype=protein_coding;gene_synonym=SCE46.07c;locus_tag=SCO3450
NC_003888.3	RefSeq	CDS	3810669	3811274	.	-	0	ID=cds3408;Parent=gene3475;Dbxref=Genbank:NP_627654.1,GeneID:1098887;Name=NP_627654.1;Note=SCE46.07c%2C probable RNA polymerase sigma factor (ECF subfamily)%2C len: 201 aa%3B similar to TR:O87834 (EMBL:AJ010320) Streptomyces coelicolor RNA polymerase sigma factor SigR%2C 227 aa%3B fasta scores: opt: 337 z-score: 413.7 E(): 1.1e-15%3B 34.1%25 identity in 208 aa overlap and to SW:RPOE_MYCTU (EMBL:Z95120) Mycobacterium tuberculosis RNA polymerase sigma-E factor (sigma-24)%2C 216 aa%3B fasta socres: opt: 339 z-score: 416.4 E(): 7.5e-16%3B 35.4%25 identity in 189 aa overlap. Contains match to Pfam entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily) and match to PS01063 Sigma-70 factors ECF subfamily signature. Contains also a possible helix-turn-helix motif at residues 159..180 (+3.23 SD);gbkey=CDS;gene=SCE46.07c;product=ECF subfamily RNA polymerase sigma factor;protein_id=NP_627654.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3810679	3810682	.	-	.	ID=id4311;Dbxref=GeneID:1098887;gbkey=RBS;gene=SCE46.07c
NC_003888.3	RefSeq	sequence_feature	3810951	3811145	.	-	.	ID=id4312;Dbxref=GeneID:1098887;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 53.40%2C E-value 4.9e-12;gbkey=misc_feature;gene=SCE46.07c
NC_003888.3	RefSeq	sequence_feature	3811017	3811109	.	-	.	ID=id4313;Dbxref=GeneID:1098887;Note=PS01063 Sigma-70 factors ECF subfamily signature;gbkey=misc_feature;gene=SCE46.07c
NC_003888.3	RefSeq	ribosome_entry_site	3811375	3811380	.	+	.	ID=id4314;gbkey=RBS
NC_003888.3	RefSeq	gene	3811392	3811703	.	+	.	ID=gene3476;Dbxref=GeneID:1098888;Name=SCE46.08;gbkey=Gene;gene=SCE46.08;gene_biotype=protein_coding;gene_synonym=SCE46.08;locus_tag=SCO3451
NC_003888.3	RefSeq	CDS	3811392	3811703	.	+	0	ID=cds3409;Parent=gene3476;Dbxref=Genbank:NP_627655.1,GeneID:1098888;Name=NP_627655.1;Note=SCE46.08%2C unknown%2C len: 103 aa;gbkey=CDS;gene=SCE46.08;product=hypothetical protein;protein_id=NP_627655.1;transl_table=11
NC_003888.3	RefSeq	gene	3811766	3812845	.	-	.	ID=gene3477;Dbxref=GeneID:1098889;Name=SCE46.09c;gbkey=Gene;gene=SCE46.09c;gene_biotype=protein_coding;gene_synonym=SCE46.09c;locus_tag=SCO3452
NC_003888.3	RefSeq	CDS	3811766	3812845	.	-	0	ID=cds3410;Parent=gene3477;Dbxref=Genbank:NP_627656.1,GeneID:1098889;Name=NP_627656.1;Note=SCE46.09c%2C probable methyltransferase%2C len: 359 aa%3B similar to TR:AAF00618 (EMBL:AF166383) Mus musculus methyltransferase%2C 336 aa%3B fasta scores: opt: 868 z-score: 1022.0 E(): 0%3B 44.7%25 identity in 320 aa overlap and to SW:GRC2_LACLA (EMBL:L14679) Lactococcus lactis probable menaquinone biosynthesis methyltransferase (EC 2.1.1.-)%2C 252 aa%3B fasta scores: opt: 221 z-score: 265.2 E(): 2e-07%3B 38.7%25 identity in 111 aa overlap. Contains Pfam match to entry PF01209 Ubie_methyltran%2C ubiE/COQ5 methyltransferase family;gbkey=CDS;gene=SCE46.09c;product=methyltransferase;protein_id=NP_627656.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3812048	3812740	.	-	.	ID=id4315;Dbxref=GeneID:1098889;Note=Pfam match to entry PF01209 Ubie_methyltran%2C ubiE/COQ5 methyltransferase family%2C score -97.80%2C E-value 8.1e-05;gbkey=misc_feature;gene=SCE46.09c
NC_003888.3	RefSeq	ribosome_entry_site	3812848	3812853	.	-	.	ID=id4316;gbkey=RBS
NC_003888.3	RefSeq	gene	3812961	3814025	.	-	.	ID=gene3478;Dbxref=GeneID:1098890;Name=SCE46.10c;gbkey=Gene;gene=SCE46.10c;gene_biotype=protein_coding;gene_synonym=SCE46.10c;locus_tag=SCO3453
NC_003888.3	RefSeq	CDS	3812961	3814025	.	-	0	ID=cds3411;Parent=gene3478;Dbxref=Genbank:NP_627657.1,GeneID:1098890;Name=NP_627657.1;Note=SCE46.10c%2C probable ABC-transporter ATP binding protein%2C len: 354 aa%3B similar to TR:CAB49712 (EMBL:AJ248285) Pyrococcus abyssi ABC-transporter ATP binding protein%2C 329 aa%3B fasta scores opt: 708 z-score: 742.4 E(): 0%3B 43.9%25 identity in 280 aa overlap and to SW:CYSA_ECOLI (EMBL:M32101) Escherichia coli sulfate transport ATP-binding protein CysA%2C 365 aa%3B fasta scores: opt: 668 z-score: 700.3 E(): 1.2e-31%3B 38.6%25 identity in 332 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and two matches to Prosite entries PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCE46.10c;product=ABC-transporter ATP binding protein;protein_id=NP_627657.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3813366	3813911	.	-	.	ID=id4317;Dbxref=GeneID:1098890;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 206.00%2C E-value 5.8e-58;gbkey=misc_feature;gene=SCE46.10c
NC_003888.3	RefSeq	sequence_feature	3813552	3813596	.	-	.	ID=id4318;Dbxref=GeneID:1098890;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCE46.10c
NC_003888.3	RefSeq	sequence_feature	3813867	3813890	.	-	.	ID=id4319;Dbxref=GeneID:1098890;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCE46.10c
NC_003888.3	RefSeq	gene	3814031	3814873	.	-	.	ID=gene3479;Dbxref=GeneID:1098891;Name=SCE46.11c;gbkey=Gene;gene=SCE46.11c;gene_biotype=protein_coding;gene_synonym=SCE46.11c;locus_tag=SCO3454
NC_003888.3	RefSeq	CDS	3814031	3814873	.	-	0	ID=cds3412;Parent=gene3479;Dbxref=Genbank:NP_627658.1,GeneID:1098891;Name=NP_627658.1;Note=SCE46.11c%2C possible ABC-transporter membrane protein%2C len: 280 aa%3B similar to TR:Q44381 (EMBL:U60011) Agrobacterium tumefaciens inner membrane protein MotD%2C 273 aa%3B fasta scores: opt: 360 z-score: 418.0 E(): 6.1e-16%3B 29.3%25 identity in 256 aa overlap and to SW:POTC_ECOLI (EMBL:M64519) Escherichia coli spermidine/putrescine transport system permease PotC%2C 264 aa%3B fasta scores: opt: 309 z-score: 360.4 E(): 1e-12%3B 25.8%25 identity in 260 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and Prosite match to entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and possible N-terminal region signal peptide sequence. Contains also a possible helix-turn-helix motif at residues 159..180 (+3.23 SD);gbkey=CDS;gene=SCE46.11c;product=ABC-transporter membrane protein;protein_id=NP_627658.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3814199	3814420	.	-	.	ID=id4320;Dbxref=GeneID:1098891;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 39.50%2C E-value 7.7e-08;gbkey=misc_feature;gene=SCE46.11c
NC_003888.3	RefSeq	sequence_feature	3814331	3814417	.	-	.	ID=id4321;Dbxref=GeneID:1098891;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCE46.11c
NC_003888.3	RefSeq	gene	3814870	3815727	.	-	.	ID=gene3480;Dbxref=GeneID:1098892;Name=SCE46.12c;gbkey=Gene;gene=SCE46.12c;gene_biotype=protein_coding;gene_synonym=SCE46.12c;locus_tag=SCO3455
NC_003888.3	RefSeq	CDS	3814870	3815727	.	-	0	ID=cds3413;Parent=gene3480;Dbxref=Genbank:NP_627659.1,GeneID:1098892;Name=NP_627659.1;Note=SCE46.12c%2C possible ABC-transporter transport protein%2C len: 285 aa%3B similar to TR:O57756 (EMBL:AP000001) Pyrococcus horikoshii 284 aa long hypothetical sugar transport membrane protein%2C 284 aa%3B fasta scores: opt: 281 z-score: 329.5 E(): 5.2e-11%3B 26.6%25 identity in 278 aa overlap and to SW:UGPA_ECOLI (EMBL:X13141) Escherichia coli SN-glycerol-3-phosphate transport system permease UgpA%2C 295 aa%3B fasta scores: opt: 233 z-score: 274.6 E(): 6e-08%3B 28.7%25 identity in 279 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE46.12c;product=ABC-transporter transport protein;protein_id=NP_627659.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3814999	3815160	.	-	.	ID=id4322;Dbxref=GeneID:1098892;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 33.00%2C E-value 6.7e-06;gbkey=misc_feature;gene=SCE46.12c
NC_003888.3	RefSeq	gene	3815736	3816989	.	-	.	ID=gene3481;Dbxref=GeneID:1098893;Name=SCE46.13c;gbkey=Gene;gene=SCE46.13c;gene_biotype=protein_coding;gene_synonym=SCE46.13c;locus_tag=SCO3456
NC_003888.3	RefSeq	CDS	3815736	3816989	.	-	0	ID=cds3414;Parent=gene3481;Dbxref=Genbank:NP_627660.1,GeneID:1098893;Name=NP_627660.1;Note=SCE46.13c%2C possible hypothetical protein%2C len: 135 aa%3B similar to TR:CAC41457 (EMBL:AL591782) Rhizobium meliloti conserved hypothetical protein SMC02589%2C 408 aa%3B fasta scores: opt: 927 Z-score: 1029.9 E(): 9.8e-50%3B 37.198%25 identity in 414 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE46.13c;product=ABC transporter substrate-binding protein;protein_id=NP_627660.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3816906	3816938	.	-	.	ID=id4323;Dbxref=GeneID:1098893;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE46.13c
NC_003888.3	RefSeq	ribosome_entry_site	3817142	3817146	.	+	.	ID=id4324;gbkey=RBS
NC_003888.3	RefSeq	gene	3817153	3817770	.	+	.	ID=gene3482;Dbxref=GeneID:1098894;Name=SCE46.14;gbkey=Gene;gene=SCE46.14;gene_biotype=protein_coding;gene_synonym=SCE46.14;locus_tag=SCO3457
NC_003888.3	RefSeq	CDS	3817153	3817770	.	+	0	ID=cds3415;Parent=gene3482;Dbxref=Genbank:NP_627661.1,GeneID:1098894;Name=NP_627661.1;Note=SCE46.14%2C possible transmembrane protein%2C len: 205 aa%3B similar to TR:P76226 (EMBL:AE000270) Escherichia coli from bases 1830199 to 1840304%2C 208 aa%3B fasta scores: opt: 402 z-score: 471.0 E(): 6.9e-19%3B 37.4%25 identity in 206 aa overlap and to TR:CAB50482 (EMBL:AJ248288) Pyrococcus abyssi predicted CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase PgsA%2C 185 aa%3B fasta scores: opt: 216 z-score: 259.1 E(): 4.4e-07%3B 31.2%25 identity in 205 aa overlap;gbkey=CDS;gene=SCE46.14;product=transmembrane protein;protein_id=NP_627661.1;transl_table=11
NC_003888.3	RefSeq	gene	3817745	3818494	.	-	.	ID=gene3483;Dbxref=GeneID:1098895;Name=SCE46.15c;gbkey=Gene;gene=SCE46.15c;gene_biotype=protein_coding;gene_synonym=SCE46.15c;locus_tag=SCO3458
NC_003888.3	RefSeq	CDS	3817745	3818494	.	-	0	ID=cds3416;Parent=gene3483;Dbxref=Genbank:NP_627662.1,GeneID:1098895;Name=NP_627662.1;Note=SCE46.15c possible integral membrane protein%2C len: 249 aa%3B similar to various hypothetical proteins%2C e.g. SW:Y305_SYNY3 (EMBL:D64005) Synechocystis sp. hypothetical 22.2 kD protein SLR0305%2C 209 aa%3B fasta scores: opt: 419 z-score: 450.0 E(): 1e-17%3B 39.8%25 identity in 161 aa overlap;gbkey=CDS;gene=SCE46.15c;product=hypothetical protein;protein_id=NP_627662.1;transl_table=11
NC_003888.3	RefSeq	gene	3818491	3819354	.	-	.	ID=gene3484;Dbxref=GeneID:1098896;Name=SCE46.16c;gbkey=Gene;gene=SCE46.16c;gene_biotype=protein_coding;gene_synonym=SCE46.16c;locus_tag=SCO3459
NC_003888.3	RefSeq	CDS	3818491	3819354	.	-	0	ID=cds3417;Parent=gene3484;Dbxref=Genbank:NP_627663.1,GeneID:1098896;Name=NP_627663.1;Note=SCE46.16c%2C hypothetical protein%2C len: 287 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB52055 (EMBL:AL109732) Streptomyces coelicolor hypothetical 24.3kD protein%3B fasta scores: opt: 165 z-score: 195.9 E(): 0.0014%3B 37.4%25 identity in 131 aa overlap;gbkey=CDS;gene=SCE46.16c;product=hypothetical protein;protein_id=NP_627663.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3818499	3818503	.	-	.	ID=id4325;Dbxref=GeneID:1098896;gbkey=RBS;gene=SCE46.16c
NC_003888.3	RefSeq	gene	3819415	3820932	.	+	.	ID=gene3485;Dbxref=GeneID:1098897;Name=SCE46.17;gbkey=Gene;gene=SCE46.17;gene_biotype=protein_coding;gene_synonym=SCE46.17;locus_tag=SCO3460
NC_003888.3	RefSeq	CDS	3819415	3820932	.	+	0	ID=cds3418;Parent=gene3485;Dbxref=Genbank:NP_627664.1,GeneID:1098897;Name=NP_627664.1;Note=SCE46.17%2C probable oxidoreductase%2C len: 505 aa%3B similar to SW:MERA_STAAU (EMBL:L29436) Staphylococcus aureus mercuric reductase (EC 1.16.1.1) MerA%2C 547 aa%3B fasta scores: opt: 891 z-score: 971.7 E(): 0%3B 37.4%25 identity in 452 aa overlap. Contains match to Prosite entry PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site;gbkey=CDS;gene=SCE46.17;product=oxidoreductase;protein_id=NP_627664.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3819634	3819666	.	+	.	ID=id4326;Dbxref=GeneID:1098897;Note=PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site;gbkey=misc_feature;gene=SCE46.17
NC_003888.3	RefSeq	ribosome_entry_site	3820916	3820921	.	+	.	ID=id4327;Dbxref=GeneID:1098897;gbkey=RBS;gene=SCE46.17
NC_003888.3	RefSeq	gene	3820929	3821387	.	+	.	ID=gene3486;Dbxref=GeneID:1098898;Name=SCE46.18;gbkey=Gene;gene=SCE46.18;gene_biotype=protein_coding;gene_synonym=SCE46.18;locus_tag=SCO3461
NC_003888.3	RefSeq	CDS	3820929	3821387	.	+	0	ID=cds3419;Parent=gene3486;Dbxref=Genbank:NP_627665.1,GeneID:1098898;Name=NP_627665.1;Note=SCE46.18%2C possible integral membrane protein%2C len: 152 aa%3B similar to SW: MAUE_PARDE (EMBL:X98581) Paracoccus denitrificans methylamine utilization protein MauE%2C 186 aa%3B fasta scores: opt: 162 z-score: 208.6 E(): 0.00028%3B 28.1%25 identity in 139 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE46.18;product=hypothetical protein;protein_id=NP_627665.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3821375	3821379	.	+	.	ID=id4328;Dbxref=GeneID:1098898;gbkey=RBS;gene=SCE46.18
NC_003888.3	RefSeq	gene	3821387	3822823	.	+	.	ID=gene3487;Dbxref=GeneID:1098899;Name=SCE46.19;gbkey=Gene;gene=SCE46.19;gene_biotype=protein_coding;gene_synonym=SCE46.19;locus_tag=SCO3462
NC_003888.3	RefSeq	CDS	3821387	3822823	.	+	0	ID=cds3420;Parent=gene3487;Dbxref=Genbank:NP_627666.1,GeneID:1098899;Name=NP_627666.1;Note=SCE46.19%2C unknown%2C len: 478 aa;gbkey=CDS;gene=SCE46.19;product=hypothetical protein;protein_id=NP_627666.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3822837	3822841	.	+	.	ID=id4329;gbkey=RBS
NC_003888.3	RefSeq	gene	3822850	3823638	.	+	.	ID=gene3488;Dbxref=GeneID:1098900;Name=SCE46.20;gbkey=Gene;gene=SCE46.20;gene_biotype=protein_coding;gene_synonym=SCE46.20;locus_tag=SCO3463
NC_003888.3	RefSeq	CDS	3822850	3823638	.	+	0	ID=cds3421;Parent=gene3488;Dbxref=Genbank:NP_627667.1,GeneID:1098900;Name=NP_627667.1;Note=SCE46.20%2C probable phosphorylase%2C len: 262 aa%3B similar to TR:O58891 (EMBL:AP000005) Pyrococcus horikoshii 265 aa long hypothetical 5'-methylthioadenosine phosphorylase PH1143 265 aa%3B fasta scores: opt: 461 z-score: 534.1 E(): 2.1e-22%3B 35.1%25 identity in 251 aa overlap and to SW:MTAP_HUMAN (EMBL:U22233) Homo sapiens 5'-methylthioadenosine phosphorylase (EC 2.4.2.28) MtaP%2C 283 aa%3B fasta scores: opt: 373 z-score: 433.4 E(): 8.6e-17%3B 32.4%25 identity in 216 aa overlap. Contains Pfam match to entry PF00896 Mtap_PNP%2C phosphorylases family 2;gbkey=CDS;gene=SCE46.20;product=phosphorylase;protein_id=NP_627667.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3822856	3823482	.	+	.	ID=id4330;Dbxref=GeneID:1098900;Note=Pfam match to entry PF00896 Mtap_PNP%2C phosphorylases family 2%2C score 79.60%2C E-value 6.2e-20;gbkey=misc_feature;gene=SCE46.20
NC_003888.3	RefSeq	gene	3823677	3824309	.	+	.	ID=gene3489;Dbxref=GeneID:1098901;Name=SCE46.21;gbkey=Gene;gene=SCE46.21;gene_biotype=protein_coding;gene_synonym=SCE46.21;locus_tag=SCO3464
NC_003888.3	RefSeq	CDS	3823677	3824309	.	+	0	ID=cds3422;Parent=gene3489;Dbxref=Genbank:NP_627668.1,GeneID:1098901;Name=NP_627668.1;Note=SCE46.21%2C hypothetical protein%2C len: 210 aa%3B identical to N-terminal region of previously sequenced TR:BAA84086 (EMBL:AB032065) Streptomyces coelicolor hypothetical 47.9 kD protein%2C 446 aa and similar to TR:P74231 (EMBL:D90913) Synechocystis sp. (strain PCC 6803) hypothetical 23.5 kD protein%2C 211 aa%3B fasta scores: opt: 327 z-score: 394.6 E(): 1.2e-14%3B 36.5%25 identity in 189 aa overlap. Contains plasmid SCP1 integration target site;gbkey=CDS;gene=SCE46.21;product=hypothetical protein;protein_id=NP_627668.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3824072	3824131	.	+	.	ID=id4331;Dbxref=GeneID:1098901;Note=plasmid SCP1 integration target site [Streptomyces coelicolor%2C strain M130%2C Genomic%2C 60 nt] (EMBL:S38799);gbkey=misc_feature;gene=SCE46.21
NC_003888.3	RefSeq	ribosome_entry_site	3824297	3824301	.	+	.	ID=id4332;Dbxref=GeneID:1098901;gbkey=RBS;gene=SCE46.21
NC_003888.3	RefSeq	gene	3824306	3825016	.	+	.	ID=gene3490;Dbxref=GeneID:1098902;Name=SCE46.22;gbkey=Gene;gene=SCE46.22;gene_biotype=protein_coding;gene_synonym=SCE46.22,SCE65.01;locus_tag=SCO3465
NC_003888.3	RefSeq	CDS	3824306	3825016	.	+	0	ID=cds3423;Parent=gene3490;Dbxref=Genbank:NP_733606.1,GeneID:1098902;Name=NP_733606.1;Note=SCE65.01%2C hypothetical protein (partial CDS)%2C len: >38 aa%3B identical to previously sequenced TR:BAA84086 (EMBL:AB032065) Streptomyces ceolicolor hypothetical 47.9 KD protein%2C 446 aa~SCE46.22%2C hypothetical protein%2C len: >231 aa%3B identical to C-terminal region of previously sequenced TR:BAA84086 (EMBL:AB032065) Streptomyces coelicolor hypothetical 47.9 kD protein%2C 446 aa. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=SCE46.22;product=hypothetical protein;protein_id=NP_733606.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3824318	3824764	.	+	.	ID=id4333;Dbxref=GeneID:1098902;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 58.60%2C E-value 1.3e-13;gbkey=misc_feature;gene=SCE46.22
NC_003888.3	RefSeq	sequence_feature	3824899	3829006	.	+	.	ID=id4334;Note=previosuly sequenced fragment (EMBL:AJ245804) 100%25 identity;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	3825135	3826259	.	+	.	ID=id4335;Note=IS468;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3825135	3825157	.	+	.	ID=id4336;Note=23 bp IR for IS648;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3825371	3826210	.	+	.	ID=gene3491;Dbxref=GeneID:1098903;Name=IS468B;gbkey=Gene;gene=IS468B;gene_biotype=protein_coding;gene_synonym=IS468B,SCE65.02;locus_tag=SCO3466
NC_003888.3	RefSeq	CDS	3825371	3826210	.	+	0	ID=cds3424;Parent=gene3491;Dbxref=Genbank:NP_627669.1,GeneID:1098903;Name=NP_627669.1;Note=SCE65.02%2C IS468B%2C transposase%2C len: 279 aa%3B identical to previously sequenced TR:BAA84088 (EMB:AB032065) Streptomyces coelicolor transposase IS468B-ORF%2C to Streptomyces coelicolor SCE65.03 and to Streptomyces coelicolor SCJ11.27c. Contains Pfam matches to entry PF01675 Transposase_13%2C Transposase and to entry PF01511 Transposase_6%2C Transposase;gbkey=CDS;gene=IS468B;product=transposase;protein_id=NP_627669.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3825512	3825766	.	+	.	ID=id4337;Dbxref=GeneID:1098903;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 106.60%2C E-value 4.9e-28;gbkey=misc_feature;gene=IS468B
NC_003888.3	RefSeq	sequence_feature	3825896	3826144	.	+	.	ID=id4338;Dbxref=GeneID:1098903;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 83.30%2C E-value 5e-21;gbkey=misc_feature;gene=IS468B
NC_003888.3	RefSeq	repeat_region	3826237	3826259	.	-	.	ID=id4339;Note=23 bp IR for IS648;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3826473	3827312	.	+	.	ID=gene3492;Dbxref=GeneID:1098904;Name=IS468B;gbkey=Gene;gene=IS468B;gene_biotype=protein_coding;gene_synonym=IS468B,SCE65.03;locus_tag=SCO3467
NC_003888.3	RefSeq	CDS	3826473	3827312	.	+	0	ID=cds3425;Parent=gene3492;Dbxref=Genbank:NP_627670.1,GeneID:1098904;Name=NP_627670.1;Note=SCE65.03%2C IS468B%2C transposase%2C len: 279 aa%3B identical to previously sequenced TR:BAA84088 (EMB:AB032065) Streptomyces coelicolor transposase IS468B-ORF%2C to S. coelicolor SCE65.02 and to S. coelicolor SCJ11.27c. Contains Pfam matches to entry PF01675 Transposase_13%2C Transposase and to entry PF01511 Transposase_6%2C Transposase;gbkey=CDS;gene=IS468B;product=transposase;protein_id=NP_627670.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3826614	3826868	.	+	.	ID=id4340;Dbxref=GeneID:1098904;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 106.60%2C E-value 4.9e-28;gbkey=misc_feature;gene=IS468B
NC_003888.3	RefSeq	sequence_feature	3826998	3827246	.	+	.	ID=id4341;Dbxref=GeneID:1098904;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 83.30%2C E-value 5e-21;gbkey=misc_feature;gene=IS468B
NC_003888.3	RefSeq	repeat_region	3827364	3829032	.	+	.	ID=id4342;Note=IS469;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3827364	3827399	.	+	.	ID=id4343;Note=36 bp IR for IS469;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3827457	3828962	.	+	.	ID=gene3493;Dbxref=GeneID:1098905;Name=IS469;gbkey=Gene;gene=IS469;gene_biotype=protein_coding;gene_synonym=IS469,SCE65.04;locus_tag=SCO3468
NC_003888.3	RefSeq	CDS	3827457	3828962	.	+	0	ID=cds3426;Parent=gene3493;Dbxref=Genbank:NP_627671.1,GeneID:1098905;Name=NP_627671.1;Note=SCE65.04%2C IS469%2C transposase%2C len: 501 a%3B identical to previously sequenced TR:BAA84089 (EMBL:AB032065) Streptomyces coelicolor IS469-ORF%2C 501 aa%2C to Streptomyces coelicolor SCE65.26 and highly similar to Streptomyces coelicolor SCE65.05c%2C 513 aa%3B fasta scores: opt: 2079 z-score: 2166.3 E(): 0%3B 63.7%25 identity in 501 aa overlap. Contains Leucine TTA codon%2C possible target for bldA regulation;gbkey=CDS;gene=IS469;product=transposase;protein_id=NP_627671.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3827787	3827789	.	+	.	ID=id4344;Dbxref=GeneID:1098905;Note=Leucine TTA codon. Possible target for bldA regulation;gbkey=misc_feature;gene=IS469
NC_003888.3	RefSeq	sequence_feature	3828999	3831525	.	-	.	ID=id4345;Note=previously sequenced fragment (EMBL:AB032065);gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	3828999	3830640	.	-	.	ID=id4346;Note=IS469;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	3828999	3829032	.	-	.	ID=id4347;Note=34 bp repeat for IS469;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3829043	3830584	.	-	.	ID=gene3494;Dbxref=GeneID:1098906;Name=IS469;gbkey=Gene;gene=IS469;gene_biotype=protein_coding;gene_synonym=IS469,SCE65.05c;locus_tag=SCO3469
NC_003888.3	RefSeq	CDS	3829043	3830584	.	-	0	ID=cds3427;Parent=gene3494;Dbxref=Genbank:NP_627672.1,GeneID:1098906;Name=NP_627672.1;Note=SCE65.05c%2C IS469%2C transposase%2C len: 513 aa%3B identical to previously sequenced TR:BAA84089 (EMBL:AB032065) Streptomyces coelicolor IS469-ORF%2C 501 aa%2C to Streptomyces coelicolor SCE65.26 and highly similar to Streptomyces coelicolor SCE65.04%2C 501 aa%3B fasta scores: opt: 2079 z-score: 2040.2 E(): 0%3B 63.7%25 identity in 501 aa overlap. Contains Pfam match to entry PF01610 Transposase_12%2C Transposase. Also contains Leucine TTA codon%2C possible target for bldA regulation and a possible helix-turn-helix motif at residues 219..312 (+3.15 SD);gbkey=CDS;gene=IS469;product=transposase;protein_id=NP_627672.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3829547	3830488	.	-	.	ID=id4348;Dbxref=GeneID:1098906;Note=Pfam match to entry PF01610 Transposase_12%2C Transposase%2C score 58.60%2C E-value 1.4e-13;gbkey=misc_feature;gene=IS469
NC_003888.3	RefSeq	sequence_feature	3830219	3830221	.	-	.	ID=id4349;Dbxref=GeneID:1098906;Note=Leucine TTA codon. Possible target for bldA regulation;gbkey=misc_feature;gene=IS469
NC_003888.3	RefSeq	repeat_region	3830607	3830640	.	-	.	ID=id4350;Note=34 bp repeat for IS469;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3830698	3831525	.	-	.	ID=gene3495;Dbxref=GeneID:1098907;Name=IS470;gbkey=Gene;gene=IS470;gene_biotype=protein_coding;gene_synonym=IS470,SCE65.06c;locus_tag=SCO3470
NC_003888.3	RefSeq	CDS	3830698	3831525	.	-	0	ID=cds3428;Parent=gene3495;Dbxref=Genbank:NP_627673.1,GeneID:1098907;Name=NP_627673.1;Note=SCE65.06c%2C IS470%2C transposase%2C len: 275 aa%3B identical to previously sequenced TR:BAA84091 (EMBL:AB032065) Streptomyces coelicolor transposase IS470-ORF%2C 275 aa;gbkey=CDS;gene=IS470;product=transposase;protein_id=NP_627673.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3831534	3831537	.	-	.	ID=id4351;gbkey=RBS
NC_003888.3	RefSeq	gene	3831705	3832634	.	-	.	ID=gene3496;Dbxref=GeneID:1098908;Name=dagA;gbkey=Gene;gene=dagA;gene_biotype=protein_coding;gene_synonym=dagA,SCE65.07c;locus_tag=SCO3471
NC_003888.3	RefSeq	CDS	3831705	3832634	.	-	0	ID=cds3429;Parent=gene3496;Dbxref=Genbank:NP_627674.1,GeneID:1098908;Name=NP_627674.1;Note=SCE65.07c%2C dagA%2C extracellular agarase precursor%2C len: 309 aa%3B identical to previously sequenced SW:AGAR_STRCO (EMBL:X05811) Streptomyces coelicolor extracellular agarase precursor (EC 3.2.1.81) DagA%2C 309 aa and similar to TR:Q59078 (EMBL:M73783) Alteromonas atlantica (Pseudomonas atlantica) beta-agarase I precursor (EC 3.2.1.81)%2C 290 aa%3B fasta scores: opt: 385 z-score: 446.1 E(): 1.8e-17%3B 33.2%25 identity in 304 aa overlap. Contains match to Prosite entry PS01034 Glycosyl hydrolases family 16 active sites. Contains N-terminal region signal sequence peptide;gbkey=CDS;gene=dagA;product=extracellular agarase;protein_id=NP_627674.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3831706	3833444	.	-	.	ID=id4352;Note=previously sequenced fragment (EMBL:X05811) 100%25 identity;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	3832137	3832172	.	-	.	ID=id4353;Dbxref=GeneID:1098908;Note=PS01034 Glycosyl hydrolases family 16 active sites;gbkey=misc_feature;gene=dagA
NC_003888.3	RefSeq	ribosome_entry_site	3832642	3832645	.	-	.	ID=id4354;gbkey=RBS
NC_003888.3	RefSeq	gene	3832988	3833251	.	-	.	ID=gene3497;Dbxref=GeneID:1098909;Name=SCE65.08c;gbkey=Gene;gene=SCE65.08c;gene_biotype=protein_coding;gene_synonym=SCE65.08c;locus_tag=SCO3472
NC_003888.3	RefSeq	CDS	3832988	3833251	.	-	0	ID=cds3430;Parent=gene3497;Dbxref=Genbank:NP_627675.1,GeneID:1098909;Name=NP_627675.1;Note=SCE65.08c%2C possible transposase remnant%2C len: 87 aa%3B similar to TR:P71428 (EMBL:X02734) Lactobacillus casei transposable element ISL1%2C 93 aa%3B fasta scores: opt: 98 z-score: 145.6 E(): 0.91%3B 31.5%25 identity in 54 aa overlap and to Streptomyces coelicolor SCE65.24%2C 114 aa%3B fasta scores: opt: 76 z-score: 102.7 E(): 2.3%3B 40.6%25 identity in 32 aa overlap;gbkey=CDS;gene=SCE65.08c;product=transposase remnant;protein_id=NP_627675.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3833263	3833267	.	-	.	ID=id4355;gbkey=RBS
NC_003888.3	RefSeq	gene	3834055	3834702	.	-	.	ID=gene3498;Dbxref=GeneID:1098910;Name=SCE65.09c;gbkey=Gene;gene=SCE65.09c;gene_biotype=protein_coding;gene_synonym=SCE65.09c;locus_tag=SCO3473
NC_003888.3	RefSeq	CDS	3834055	3834702	.	-	0	ID=cds3431;Parent=gene3498;Dbxref=Genbank:NP_627676.1,GeneID:1098910;Name=NP_627676.1;Note=SCE65.09c%2C probable aldolase%2C len: 215 aa%3B similar to SW:ALKH_BACSU (EMBL:L47838) Bacillus subtilis KHG/KDPG aldolase AlkH%2C 347 aa%3B fasta scores: opt: 457 z-score: 523.2 E(): 9.1e-22%3B 39.5%25 identity in 200 aa overlap and to Streptomyces coelicolor SCE65.31c%2C 225 aa%3B fasta scores: opt: 424 z-score: 429.4 E(): 1.5e-18%3B 37.7%25 identity in 215 aa overlap. Contains Pfam match to entry PF01081 Aldolase%2C KDPG and KHG aldolase and match to Prosite entry PS00160 KDPG and KHG aldolases Schiff-base forming residue;gbkey=CDS;gene=SCE65.09c;product=aldolase;protein_id=NP_627676.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3834103	3834651	.	-	.	ID=id4356;Dbxref=GeneID:1098910;Note=Pfam match to entry PF01081 Aldolase%2C KDPG and KHG aldolase%2C score 71.80%2C E-value 1.4e-17;gbkey=misc_feature;gene=SCE65.09c
NC_003888.3	RefSeq	sequence_feature	3834280	3834321	.	-	.	ID=id4357;Dbxref=GeneID:1098910;Note=PS00160 KDPG and KHG aldolases Schiff-base forming residue;gbkey=misc_feature;gene=SCE65.09c
NC_003888.3	RefSeq	ribosome_entry_site	3834707	3834711	.	-	.	ID=id4358;gbkey=RBS
NC_003888.3	RefSeq	gene	3834741	3835742	.	-	.	ID=gene3499;Dbxref=GeneID:1098911;Name=SCE65.10c;gbkey=Gene;gene=SCE65.10c;gene_biotype=protein_coding;gene_synonym=SCE65.10c;locus_tag=SCO3474
NC_003888.3	RefSeq	CDS	3834741	3835742	.	-	0	ID=cds3432;Parent=gene3499;Dbxref=Genbank:NP_627677.1,GeneID:1098911;Name=NP_627677.1;Note=SCE65.10c%2C possible sugar kinase%2C len: 333 aa%3B similar to SW:KDGK_BACSU (EMBL:L47838) Bacillus subtilis 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) KdgK%2C 324 aa%3B fasta scores: opt: 500 z-score: 585.4 E(): 3.1e-25%3B 34.1%25 identity in 299 aa overlap. Contains Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase;gbkey=CDS;gene=SCE65.10c;product=sugar kinase;protein_id=NP_627677.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3834939	3835622	.	-	.	ID=id4359;Dbxref=GeneID:1098911;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 85.30%2C E-value 8e-26;gbkey=misc_feature;gene=SCE65.10c
NC_003888.3	RefSeq	ribosome_entry_site	3835753	3835756	.	-	.	ID=id4360;gbkey=RBS
NC_003888.3	RefSeq	gene	3835870	3837003	.	-	.	ID=gene3500;Dbxref=GeneID:1098912;Name=SCE65.11c;gbkey=Gene;gene=SCE65.11c;gene_biotype=protein_coding;gene_synonym=SCE65.11c;locus_tag=SCO3475
NC_003888.3	RefSeq	CDS	3835870	3837003	.	-	0	ID=cds3433;Parent=gene3500;Dbxref=Genbank:NP_627678.1,GeneID:1098912;Name=NP_627678.1;Note=SCE65.11c%2C possible isomerase%2C len: 377 aa%3B similar to SW:ATB_RHOOP (EMBL:X99622) Rhodococcus opacus muconate cycloisomerase I (EC 5.5.1.1) CatB%2C 373 aa%3B fasta scores: opt: 390 z-score: 443.3 E(): 2.6e-17%3B 31.1%25 identity in 357 aa overlap. Contains Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1 PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2;gbkey=CDS;gene=SCE65.11c;product=galactonate dehydratase;protein_id=NP_627678.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3835990	3836994	.	-	.	ID=id4361;Dbxref=GeneID:1098912;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family%2C score 298.10%2C E-value 1.1e-85;gbkey=misc_feature;gene=SCE65.11c
NC_003888.3	RefSeq	sequence_feature	3836371	3836466	.	-	.	ID=id4362;Dbxref=GeneID:1098912;Note=PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2;gbkey=misc_feature;gene=SCE65.11c
NC_003888.3	RefSeq	sequence_feature	3836683	3836760	.	-	.	ID=id4363;Dbxref=GeneID:1098912;Note=PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1;gbkey=misc_feature;gene=SCE65.11c
NC_003888.3	RefSeq	ribosome_entry_site	3837013	3837016	.	-	.	ID=id4364;gbkey=RBS
NC_003888.3	RefSeq	gene	3837216	3837971	.	-	.	ID=gene3501;Dbxref=GeneID:1098913;Name=SCE65.12c;gbkey=Gene;gene=SCE65.12c;gene_biotype=protein_coding;gene_synonym=SCE65.12c;locus_tag=SCO3476
NC_003888.3	RefSeq	CDS	3837216	3837971	.	-	0	ID=cds3434;Parent=gene3501;Dbxref=Genbank:NP_627679.1,GeneID:1098913;Name=NP_627679.1;Note=SCE65.12c%2C probable dehydrogenase%2C len: 251 aa%3B similar to SW:KDUD_BACSU (EMBL:L47838) Bacillus subtilis 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) KduD%2C 254 aa%3B fasta scores: opt: 833 z-score: 937.8 E(): 0%3B 52.0%25 identity in 248 aa overlap and to Streptomyces coelicolor SCI30A.02%2C 253 aa%3B fasta scores: opt: 605 z-score: 622.2 E(): 2.7e-29%3B 44.1%25 identity in 245 aa overlap. Contains Pfam matches to entry PF00106 adh_short%2C short chain dehydrogenase and to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCE65.12c;product=short-chain dehydrogenase;protein_id=NP_627679.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3837240	3837332	.	-	.	ID=id4365;Dbxref=GeneID:1098913;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 50.50%2C E-value 3.6e-11;gbkey=misc_feature;gene=SCE65.12c
NC_003888.3	RefSeq	sequence_feature	3837396	3837944	.	-	.	ID=id4366;Dbxref=GeneID:1098913;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 208.70%2C E-value 9.1e-59;gbkey=misc_feature;gene=SCE65.12c
NC_003888.3	RefSeq	sequence_feature	3837459	3837545	.	-	.	ID=id4367;Dbxref=GeneID:1098913;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCE65.12c
NC_003888.3	RefSeq	gene	3837968	3839002	.	-	.	ID=gene3502;Dbxref=GeneID:1098914;Name=SCE65.13c;gbkey=Gene;gene=SCE65.13c;gene_biotype=protein_coding;gene_synonym=SCE65.13c;locus_tag=SCO3477
NC_003888.3	RefSeq	CDS	3837968	3839002	.	-	0	ID=cds3435;Parent=gene3502;Dbxref=Genbank:NP_627680.1,GeneID:1098914;Name=NP_627680.1;Note=SCE65.13c%2C possible dehydrogenase%2C len: 344 aa%3B similar to TR:CAB50292 (EMBL:AJ248287) Pyrococcus abyssi threonine 3-dehydrogenase (EC 1.1.1.103) 348 aa%3B fasta scores: opt: 567 z-score: 616.8 E(): 5.6e-27%3B 33.8%25 identity in 328 aa overlap and to SW:TDH_BACSU (EMBL:Z99112) threonine 3-dehydrogenase (EC 1.1.103) Tdh%2C 347 aa%3B fasta scores: opt: 544 z-score: 592.1 E(): 1.3e-25%3B 31.4%25 identity in 331 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SCE65.13c;product=dehydrogenase;protein_id=NP_627680.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3837992	3838987	.	-	.	ID=id4368;Dbxref=GeneID:1098914;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 148.10%2C E-value 1.5e-40;gbkey=misc_feature;gene=SCE65.13c
NC_003888.3	RefSeq	gene	3838999	3840033	.	-	.	ID=gene3503;Dbxref=GeneID:1098915;Name=SCE65.14c;gbkey=Gene;gene=SCE65.14c;gene_biotype=protein_coding;gene_synonym=SCE65.14c;locus_tag=SCO3478
NC_003888.3	RefSeq	CDS	3838999	3840033	.	-	0	ID=cds3436;Parent=gene3503;Dbxref=Genbank:NP_627681.1,GeneID:1098915;Name=NP_627681.1;Note=SCE65.14c%2C probable dehydrogenase%2C len: 344 aa%3B similar to TR:O50095 (EMBL:AP000006) Pyrococcus horikoshii 307aa long hypothetical phosphoglycerate dehydrogenase PH1387%2C 307 aa%3B fasta scores: opt: 687 z-score: 777.1 E(): 0%3B 40.5%25 identity in 291 aa overlap and to SW:SERA_METTH (EMBL:AE000870%3B) Methanobacterium thermoautotrophicum D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) SerA%2C 525 aa%3B fasta scores: opt: 664 z-score: 748.1 E(): 0%3B 39.0%25 identity in 282 aa overlap. Contains Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases and match to Prosite entry PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2;gbkey=CDS;gene=SCE65.14c;product=dehydrogenase;protein_id=NP_627681.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3839010	3839014	.	-	.	ID=id4369;Dbxref=GeneID:1098915;gbkey=RBS;gene=SCE65.14c
NC_003888.3	RefSeq	sequence_feature	3839149	3839769	.	-	.	ID=id4370;Dbxref=GeneID:1098915;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 237.30%2C E-value 7.1e-97;gbkey=misc_feature;gene=SCE65.14c
NC_003888.3	RefSeq	sequence_feature	3839347	3839415	.	-	.	ID=id4371;Dbxref=GeneID:1098915;Note=PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2;gbkey=misc_feature;gene=SCE65.14c
NC_003888.3	RefSeq	ribosome_entry_site	3840035	3840038	.	-	.	ID=id4372;gbkey=RBS
NC_003888.3	RefSeq	gene	3840395	3843382	.	-	.	ID=gene3504;Dbxref=GeneID:1098916;Name=SCE65.15c;gbkey=Gene;gene=SCE65.15c;gene_biotype=protein_coding;gene_synonym=SCE65.15c;locus_tag=SCO3479
NC_003888.3	RefSeq	CDS	3840395	3843382	.	-	0	ID=cds3437;Parent=gene3504;Dbxref=Genbank:NP_627682.1,GeneID:1098916;Name=NP_627682.1;Note=SCE65.15c%2C possible beta-galatosidase%2C len: 995 aa%3B similar to SW:BGAL_ECOLI (EMBL:J01636) Escherichia coli beta-galactosidase (EC 3.2.1.23) (lactase) lacZ%2C 1023 aa%3B fasta scores: opt: 1594 z-score: 1693.3 E(): 0%3B 33.6%25 identity in 1039 aa overlap. Contains Pfam match to entry PF00703 Glyco_hydro_2%2C Glycosyl hydrolases family and match to Prosite entry PS00719 Glycosyl hydrolases family 2 signature 1;gbkey=CDS;gene=SCE65.15c;product=beta-galatosidase;protein_id=NP_627682.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3841559	3843289	.	-	.	ID=id4373;Dbxref=GeneID:1098916;Note=Pfam match to entry PF00703 Glyco_hydro_2%2C Glycosyl hydrolases family 2%2C score 561.00%2C E-value 7.7e-165;gbkey=misc_feature;gene=SCE65.15c
NC_003888.3	RefSeq	sequence_feature	3842180	3842257	.	-	.	ID=id4374;Dbxref=GeneID:1098916;Note=PS00719 Glycosyl hydrolases family 2 signature 1;gbkey=misc_feature;gene=SCE65.15c
NC_003888.3	RefSeq	gene	3843523	3844608	.	-	.	ID=gene3505;Dbxref=GeneID:1098917;Name=SCE65.16c;gbkey=Gene;gene=SCE65.16c;gene_biotype=protein_coding;gene_synonym=SCE65.16c;locus_tag=SCO3480
NC_003888.3	RefSeq	CDS	3843523	3844608	.	-	0	ID=cds3438;Parent=gene3505;Dbxref=Genbank:NP_627683.1,GeneID:1098917;Name=NP_627683.1;Note=SCE65.16c%2C possible racemase%2C len: 361 aa%3B similar to TR:CAB55709 (EMBL:AL117387) Streptomyces coelicolor possible racemase SCF41.06%2C 416 aa%3B fasta scores: opt: 471 z-score: 557.6 E(): 1.1e-23%3B 32.6%25 identity in 328 aa overlap and to SW:MANR_PSEPU (EMBL:M19043) Pseudomonas putida mandelate racemase (EC 5.1.2.2) MdlA%2C 359 aa%3B fasta scores: opt: 473 z-score: 561.0 E(): 7.2e-24%3B 27.8%25 identity in 363 aa overlap. Contains Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family and match to Prosite entry PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2;gbkey=CDS;gene=SCE65.16c;product=racemase;protein_id=NP_627683.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3843589	3844608	.	-	.	ID=id4375;Dbxref=GeneID:1098917;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family%2C score 144.80%2C E-value 1.5e-39;gbkey=misc_feature;gene=SCE65.16c
NC_003888.3	RefSeq	sequence_feature	3843940	3844035	.	-	.	ID=id4376;Dbxref=GeneID:1098917;Note=PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2;gbkey=misc_feature;gene=SCE65.16c
NC_003888.3	RefSeq	gene	3844670	3845782	.	-	.	ID=gene3506;Dbxref=GeneID:1098918;Name=SCE65.17c;gbkey=Gene;gene=SCE65.17c;gene_biotype=protein_coding;gene_synonym=SCE65.17c;locus_tag=SCO3481
NC_003888.3	RefSeq	CDS	3844670	3845782	.	-	0	ID=cds3439;Parent=gene3506;Dbxref=Genbank:NP_627684.1,GeneID:1098918;Name=NP_627684.1;Note=SCE65.17c unknown%2C len: 370 aa;gbkey=CDS;gene=SCE65.17c;product=hypothetical protein;protein_id=NP_627684.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3845792	3845795	.	-	.	ID=id4377;gbkey=RBS
NC_003888.3	RefSeq	gene	3845809	3846690	.	-	.	ID=gene3507;Dbxref=GeneID:1098919;Name=SCE65.18c;gbkey=Gene;gene=SCE65.18c;gene_biotype=protein_coding;gene_synonym=SCE65.18c;locus_tag=SCO3482
NC_003888.3	RefSeq	CDS	3845809	3846690	.	-	0	ID=cds3440;Parent=gene3507;Dbxref=Genbank:NP_627685.1,GeneID:1098919;Name=NP_627685.1;Note=SCE65.18c%2C possible sugar-permease%2C len: 293 aa%3B similar to TR:P72399 (EMBL:Y07706) Streptomyces coelicolor maltose permease MalG%2C 302 aa%3B fasta scores: opt: 491 z-score: 561.6 E(): 6.6e-24%3B 28.2%25 identity in 301 aa overlap. Contains match to Pfam entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE65.18c;product=sugar-permease;protein_id=NP_627685.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3845935	3846159	.	-	.	ID=id4378;Dbxref=GeneID:1098919;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 52.20%2C E-value 1.2e-11;gbkey=misc_feature;gene=SCE65.18c
NC_003888.3	RefSeq	sequence_feature	3846070	3846156	.	-	.	ID=id4379;Dbxref=GeneID:1098919;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCE65.18c
NC_003888.3	RefSeq	ribosome_entry_site	3846700	3846703	.	-	.	ID=id4380;gbkey=RBS
NC_003888.3	RefSeq	gene	3846702	3847649	.	-	.	ID=gene3508;Dbxref=GeneID:1098920;Name=SCE65.19c;gbkey=Gene;gene=SCE65.19c;gene_biotype=protein_coding;gene_synonym=SCE65.19c;locus_tag=SCO3483
NC_003888.3	RefSeq	CDS	3846702	3847649	.	-	0	ID=cds3441;Parent=gene3508;Dbxref=Genbank:NP_627686.1,GeneID:1098920;Name=NP_627686.1;Note=SCE65.19c%2C probable integral membrane transport protein%2C len: 315 aa%3B similar to TR:O50452 (EMBL:AL021006) Mycobacterium tuberculosis probable sugar transport protein MTV006.08%2C 307 aa%3B fasta scores: opt: 542 z-score: 668.9 E(): 7e-30%3B 32.6%25 identity in 288 aa overlap. Contains match to Pfam entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE65.19c;product=integral membrane transport protein;protein_id=NP_627686.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3846816	3847049	.	-	.	ID=id4381;Dbxref=GeneID:1098920;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 60.80%2C E-value 3e-14;gbkey=misc_feature;gene=SCE65.19c
NC_003888.3	RefSeq	gene	3847685	3848995	.	-	.	ID=gene3509;Dbxref=GeneID:1098921;Name=SCE65.20c;gbkey=Gene;gene=SCE65.20c;gene_biotype=protein_coding;gene_synonym=SCE65.20c;locus_tag=SCO3484
NC_003888.3	RefSeq	CDS	3847685	3848995	.	-	0	ID=cds3442;Parent=gene3509;Dbxref=Genbank:NP_627687.1,GeneID:1098921;Name=NP_627687.1;Note=SCE65.20c%2C possible  sugar-binding protein%2C len: 436 aa%3B similar to TR:P72397 (EMBL:Y07706) Streptomyces coelicolor  maltose-binding protein MalE%2C 423 aa%3B fasta scores: opt: 361 z-score: 398.4 E(): 8.1e-15%3B 26.2%25 identity in 409 aa overlapand to TR:O87856 (EMBL:AL031013) Streptomyces coelicolor  sugar binding protein SC8A6.22%2C 438 aa%3B fasta scores: opt: 344 z-score: 379.6 E(): 9e-14%3B 23.6%25 identity in 365 aa overlap. Contains match to Pfam entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and match to Prosite entry correctly situated PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCE65.20c;product=sugar-binding protein;protein_id=NP_627687.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3847694	3848551	.	-	.	ID=id4382;Dbxref=GeneID:1098921;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 71.70%2C E-value 1.6e-17;gbkey=misc_feature;gene=SCE65.20c
NC_003888.3	RefSeq	sequence_feature	3848903	3848935	.	-	.	ID=id4383;Dbxref=GeneID:1098921;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCE65.20c
NC_003888.3	RefSeq	ribosome_entry_site	3849003	3849006	.	-	.	ID=id4384;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	3849104	3849151	.	-	.	ID=id4385;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3849177	3850226	.	-	.	ID=gene3510;Dbxref=GeneID:1098922;Name=SCE65.21c;gbkey=Gene;gene=SCE65.21c;gene_biotype=protein_coding;gene_synonym=SCE65.21c;locus_tag=SCO3485
NC_003888.3	RefSeq	CDS	3849177	3850226	.	-	0	ID=cds3443;Parent=gene3510;Dbxref=Genbank:NP_627688.1,GeneID:1098922;Name=NP_627688.1;Note=SCE65.21c%2C probable lacI-family transcriptional regulator%2C len: 349 aa%3B similar to TR:AAD42741 (EMBL:AF105219) Thermomonospora curvata regulatory protein AglR%2C 347 aa%3B fasta scores: opt: 563 z-score: 648.1 E(): 1e-28%3B 34.9%25 identity in 341 aa overlap and to SW:CYTR_ECOLI (EMBL:X03683) Escherichia coli%2C transcriptional repressor CytR 341 aa%3B fasta scores: opt: 552 z-score: 635.6 E(): 5e-28%3B 30.5%25 identity in 347 aa overlap. Contains matches to Pfam entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI. Contains probable helix-turn-helix motif at residues 18..39 (+4.84 SD);gbkey=CDS;gene=SCE65.21c;product=LacI family transcriptional regulator;protein_id=NP_627688.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3849285	3850004	.	-	.	ID=id4386;Dbxref=GeneID:1098922;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 68.80%2C E-value 1.2e-16;gbkey=misc_feature;gene=SCE65.21c
NC_003888.3	RefSeq	sequence_feature	3850101	3850184	.	-	.	ID=id4387;Dbxref=GeneID:1098922;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 27.20%2C E-value 3.9e-06;gbkey=misc_feature;gene=SCE65.21c
NC_003888.3	RefSeq	ribosome_entry_site	3850235	3850238	.	-	.	ID=id4388;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	3850377	3850381	.	+	.	ID=id4389;gbkey=RBS
NC_003888.3	RefSeq	gene	3850388	3851866	.	+	.	ID=gene3511;Dbxref=GeneID:1098923;Name=SCE65.22;gbkey=Gene;gene=SCE65.22;gene_biotype=protein_coding;gene_synonym=SCE65.22;locus_tag=SCO3486
NC_003888.3	RefSeq	CDS	3850388	3851866	.	+	0	ID=cds3444;Parent=gene3511;Dbxref=Genbank:NP_627689.1,GeneID:1098923;Name=NP_627689.1;Note=SCE65.22%2C probable aldehyde dehydrogenase%2C len: 492 aa%3B similar to SW:ALDA_ECOLI (EBML:M64541) Escherichia coli aldehyde dehydrogenase A (EC 1.2.1.22) aldA%2C 478 aa%3B fasta scores: opt: 1189 z-score: 1347.0 E(): 0%3B 39.1%25 identity in 473 aa overlap and to Streptomyces coelicolor SCI35.34c%2C 483 aa%3B fasta scores: opt: 1014 z-score: 940.7 E(): 0%3B 40.2%25 identity in 455 aa overlap. Contains match to Pfam entry PF00171 aldedh%2C Aldehyde dehydrogenase and two matches to Prosite entries PS00687 Aldehyde dehydrogenases glutamic acid active site PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=CDS;gene=SCE65.22;product=aldehyde dehydrogenase;protein_id=NP_627689.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3850454	3851857	.	+	.	ID=id4390;Dbxref=GeneID:1098923;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase%2C score 617.50%2C E-value 7.6e-182;gbkey=misc_feature;gene=SCE65.22
NC_003888.3	RefSeq	sequence_feature	3851159	3851182	.	+	.	ID=id4391;Dbxref=GeneID:1098923;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SCE65.22
NC_003888.3	RefSeq	sequence_feature	3851243	3851278	.	+	.	ID=id4392;Dbxref=GeneID:1098923;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SCE65.22
NC_003888.3	RefSeq	ribosome_entry_site	3852239	3852243	.	+	.	ID=id4393;gbkey=RBS
NC_003888.3	RefSeq	gene	3852249	3854645	.	+	.	ID=gene3512;Dbxref=GeneID:1098924;Name=SCE65.23;gbkey=Gene;gene=SCE65.23;gene_biotype=protein_coding;gene_synonym=SCE65.23;locus_tag=SCO3487
NC_003888.3	RefSeq	CDS	3852249	3854645	.	+	0	ID=cds3445;Parent=gene3512;Dbxref=Genbank:NP_627690.1,GeneID:1098924;Name=NP_627690.1;Note=SCE65.23%2C possible hydrolase%2C len: 798 aa%3B similar to SW:AGAB_VIBS7 (EMBL:D21202) Vibrio sp. (strain JT0107) beta-agarase B (EC 3.2.1.81) AgaB%2C 955 aa%3B fasta socres: opt: 1394 z-score: 1581.4 E(): 0%3B 39.0%25 identity in 772 aa overlap. Contains possible hydrophobic membrane spanning region and Leucine TTA codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCE65.23;product=hydrolase;protein_id=NP_627690.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3852348	3852350	.	+	.	ID=id4394;Dbxref=GeneID:1098924;Note=Leucine TTA codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCE65.23
NC_003888.3	RefSeq	ribosome_entry_site	3854796	3854799	.	+	.	ID=id4395;gbkey=RBS
NC_003888.3	RefSeq	gene	3854814	3855331	.	+	.	ID=gene3513;Dbxref=GeneID:1098925;Name=SCE65.24;gbkey=Gene;gene=SCE65.24;gene_biotype=pseudogene;gene_synonym=SCE65.24,SCE65.25;locus_tag=SCO3488;pseudo=true
NC_003888.3	RefSeq	sequence_feature	3854814	3855331	.	+	.	ID=id4396;Dbxref=GeneID:1098925;Note=SCE65.24%2C probable transposase remnant%2C len: 114 aa%3B similar to TR:Q46068 (EMBL:X69104) Corynebacterium glutamicum IS3 related insertion element%2C 97 aa%3B fasta scores: opt: 206 z-score: 280.7 E(): 2.9e-08%3B 41.6%25 identity in 101 aa overlap and to Streptomyces coelicolor SC3A7.06c%2C 95 aa%3B fasta scores: opt: 260 z-score: 287.9 E(): 1.1e-10%3B 53.7%25 identity in 95 aa overlap. Contains a possible helix-turn-helix motif at residues 38..59 (+4.10 SD) and a probable coiled-coil at residues 76..104%2C max score: 1.403 (probability 0.73)~SCE65.25%2C possible transposase remnant%2C len: 58 aa%3B similar to TR:Q46069 (EMBL:X69104) Corynebacterium glutamicum IS3 related insertion element (fragment)%2C 298 aa%3B fasta scores: opt: 102 z-score: 164.4 E(): 0.082%3B 39.5%25 identity in 38 aa overlap%3Btransposase remnant;gbkey=misc_feature;gene=SCE65.24
NC_003888.3	RefSeq	ribosome_entry_site	3855146	3855150	.	+	.	ID=id4397;Dbxref=GeneID:1098925;gbkey=RBS;gene=SCE65.24
NC_003888.3	RefSeq	repeat_region	3855356	3857008	.	+	.	ID=id4398;Note=IS6466;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	3855356	3856983	.	+	.	ID=id4399;Note=previously sequenced fragment (EMBL:AB032065);gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	3855356	3855392	.	+	.	ID=id4400;Note=37 bp IR for IS6466;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3855405	3856946	.	+	.	ID=gene3514;Dbxref=GeneID:1098926;Name=IS466A;gbkey=Gene;gene=IS466A;gene_biotype=protein_coding;gene_synonym=IS466A,SCE65.26;locus_tag=SCO3490
NC_003888.3	RefSeq	CDS	3855405	3856946	.	+	0	ID=cds3446;Parent=gene3514;Dbxref=Genbank:NP_627691.1,GeneID:1098926;Name=NP_627691.1;Note=SCE65.26%2CIS466A%2C transposase%2C len: 513 aa%3B identical to previously sequenced TR:BAA84090 (EMBL:AB032065) Streptomyces coelicolor transposase IS466A-ORF%2C 513 aa and identical also to previosuly sequenced TR:CAB52795 (EMBL:AJ245804) Streptomyces coelicolor transposase TnpA%2C 513 aa%2C to Streptomyces coelicolor SCE65.05c and higly similar to Streptomyces coelicolor SCE65.04%2C 501 aa%3B fasta scores: opt: 2079 z-score: 2040.2 E(): 0%3B 63.7%25 identity in 501 aa overlap. Contains Leucine TTA codon%2C possible target for bldA regulation and a possible helix-turn-helix motif at residues 291..312 (+3.15 SD);gbkey=CDS;gene=IS466A;product=transposase;protein_id=NP_627691.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3855501	3856442	.	+	.	ID=id4401;Dbxref=GeneID:1098926;Note=Pfam match to entry PF01610 Transposase_12%2C Transposase%2C score 58.60%2C E-value 1.4e-13;gbkey=misc_feature;gene=IS466A
NC_003888.3	RefSeq	sequence_feature	3855768	3855770	.	+	.	ID=id4402;Dbxref=GeneID:1098926;Note=Leucine TTA codon. Possible target for bldA regulation;gbkey=misc_feature;gene=IS466A
NC_003888.3	RefSeq	repeat_region	3856956	3857008	.	+	.	ID=id4403;Note=53 bp IR for IS6466;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3857600	3858133	.	+	.	ID=gene3515;Dbxref=GeneID:1098927;Name=SCE65.27;gbkey=Gene;gene=SCE65.27;gene_biotype=protein_coding;gene_synonym=SCE65.27;locus_tag=SCO3491
NC_003888.3	RefSeq	CDS	3857600	3858133	.	+	0	ID=cds3447;Parent=gene3515;Dbxref=Genbank:NP_627692.1,GeneID:1098927;Name=NP_627692.1;Note=SCE65.27%2C possible transmembrane protein%2C len: 177 aa%3B highly similar to TR:CAB41065 (EMBL:AL049645) Streptomyces coelicolor hypothetical 15.4 KD protein SCE2.06%2C 146 aa%3B fasta scores: opt: 780 z-score: 972.8 E(): 0%3B 90.9%25 identity in 132 aa overlap;gbkey=CDS;gene=SCE65.27;product=transmembrane protein;protein_id=NP_627692.1;transl_table=11
NC_003888.3	RefSeq	gene	3858303	3858431	.	-	.	ID=gene3516;Dbxref=GeneID:1098928;Name=SCE65.28c;gbkey=Gene;gene=SCE65.28c;gene_biotype=protein_coding;gene_synonym=SCE65.28c;locus_tag=SCO3492
NC_003888.3	RefSeq	CDS	3858303	3858431	.	-	0	ID=cds3448;Parent=gene3516;Dbxref=Genbank:NP_627693.1,GeneID:1098928;Name=NP_627693.1;Note=SCE65.28c%2C unknown%2C len: 42 aa;gbkey=CDS;gene=SCE65.28c;product=hypothetical protein;protein_id=NP_627693.1;transl_table=11
NC_003888.3	RefSeq	gene	3858421	3859008	.	-	.	ID=gene3517;Dbxref=GeneID:1098929;Name=SCE65.29c;gbkey=Gene;gene=SCE65.29c;gene_biotype=protein_coding;gene_synonym=SCE65.29c;locus_tag=SCO3493
NC_003888.3	RefSeq	CDS	3858421	3859008	.	-	0	ID=cds3449;Parent=gene3517;Dbxref=Genbank:NP_627694.1,GeneID:1098929;Name=NP_627694.1;Note=SCE65.29c%2C possible acetyl transferase%2C len: 195 aa%3B similar to TR:AAD15402 (EMBL:AC006223) Arabidopsis thaliana alanine acetyl transferase F22D22.23%2C 183 aa%3B fasta scores: opt: 208 z-score: 273.8 E(): 7.1e-08%3B 30.8%25 identity in 172 aa overlap and to SW:ATDA_ECOLI (EMBL:D25276) Escherichia coli spermidine N1-acetyltransferase (EC 2.3.1.57) SpeG%2C 185 aa%3B fasta scores: opt: 163 z-score: 216.7 E(): 0.00011%3B 23.6%25 identity in 174 aa overlap. Contains match to Pfam entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCE65.29c;product=acetyl transferase;protein_id=NP_627694.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3858577	3858987	.	-	.	ID=id4404;Dbxref=GeneID:1098929;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 19.20%2C E-value 0.016;gbkey=misc_feature;gene=SCE65.29c
NC_003888.3	RefSeq	gene	3859063	3860043	.	-	.	ID=gene3518;Dbxref=GeneID:1098930;Name=SCE65.30c;gbkey=Gene;gene=SCE65.30c;gene_biotype=protein_coding;gene_synonym=SCE65.30c;locus_tag=SCO3494
NC_003888.3	RefSeq	CDS	3859063	3860043	.	-	0	ID=cds3450;Parent=gene3518;Dbxref=Genbank:NP_627695.1,GeneID:1098930;Name=NP_627695.1;Note=SCE65.30c%2C probable sugar kinase%2C len: 326 aa%3B similar to TR:Q9ZFM1 (EMBL:AF098273) Bacillus stearothermophilus 2-keto-3-deoxy-gluconate kinase KdgK%2C 314 aa%3B fasta scores: opt: 598 z-score: 671.6 E(): 4.9e-30%3B 37.0%25 identity in 308 aa overlap and to SW:KDGK_BACSU (EMBL:L47838) Bacillus subtilis 2-dehydro-3-deoxygluconokinase (EC 2.7.1.4) KdgK%2C 324 aa%3B fasta scores: opt: 560 z-score: 629.2 E(): 1.1e-27%3B 35.4%25 identity in 311 aa overlap. Contains match to Pfam entry PF00294 pfkB%2C pfkB family carbohydrate kinase and match to Prosite entry PS00584 pfkB family of carbohydrate kinases signature 2;gbkey=CDS;gene=SCE65.30c;product=sugar kinase;protein_id=NP_627695.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3859216	3859257	.	-	.	ID=id4405;Dbxref=GeneID:1098930;Note=PS00584 pfkB family of carbohydrate kinases signature 2;gbkey=misc_feature;gene=SCE65.30c
NC_003888.3	RefSeq	sequence_feature	3859222	3859710	.	-	.	ID=id4406;Dbxref=GeneID:1098930;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 59.00%2C E-value 1.4e-17;gbkey=misc_feature;gene=SCE65.30c
NC_003888.3	RefSeq	gene	3860040	3860717	.	-	.	ID=gene3519;Dbxref=GeneID:1098931;Name=SCE65.31c;gbkey=Gene;gene=SCE65.31c;gene_biotype=protein_coding;gene_synonym=SCE65.31c;locus_tag=SCO3495
NC_003888.3	RefSeq	CDS	3860040	3860717	.	-	0	ID=cds3451;Parent=gene3519;Dbxref=Genbank:NP_627696.1,GeneID:1098931;Name=NP_627696.1;Note=SCE65.31c probable aldolase%2C len: 225 aa%3B similar to TR:AAD35160 (EMBL:AE001693) Thermotoga maritima 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TM0066%2C 205 aa%3B fasta scores: opt: 437 z-score: 460.7 E(): 2.8e-18%3B 39.1%25 identity in 174 aa overlap and to SW:ALKH_BACSU (EMBL:L47838) Bacillus subtilis Khg/KdpG aldolase KdgA%2C 196 aa %3Bfasta scores: opt: 379 z-score: 401.8 E(): 5.3e-15%3B 37.9%25 identity in 177 aa overlap. Contains match to Pfam entry PF01081 Aldolase%2C KDPG and KHG aldolase;gbkey=CDS;gene=SCE65.31c;product=aldolase;protein_id=NP_627696.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3860085	3860672	.	-	.	ID=id4407;Dbxref=GeneID:1098931;Note=Pfam match to entry PF01081 Aldolase%2C KDPG and KHG aldolase%2C score 69.00%2C E-value 9.7e-17;gbkey=misc_feature;gene=SCE65.31c
NC_003888.3	RefSeq	gene	3861209	3862690	.	-	.	ID=gene3520;Dbxref=GeneID:1098932;Name=SCE65.32c;gbkey=Gene;gene=SCE65.32c;gene_biotype=protein_coding;gene_synonym=SCE65.32c;locus_tag=SCO3496
NC_003888.3	RefSeq	CDS	3861209	3862690	.	-	0	ID=cds3452;Parent=gene3520;Dbxref=Genbank:NP_627697.1,GeneID:1098932;Name=NP_627697.1;Note=SCE65.32c%2C possible lyase precursor%2C len: 493 aa%3B low similarity to SW:ALYP_PSESO (EMBL:D10336) Pseudomonas sp. (strain OS-ALG-9) alginate lyase precursor (EC 4.2.2.3) (poly(beta-D-mannuronate) lyase) (poly(ManA) alginate lyase) Aly or AlyP%2C 398 aa%3B fasta scores: opt: 550 z-score: 593.8 E(): 1.1e-25%3B 29.5%25 identity in 380 aa overlap. Contains possible signal peptide sequence and also a Leucine TTA codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCE65.32c;product=lyase;protein_id=NP_627697.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3862256	3862258	.	-	.	ID=id4408;Dbxref=GeneID:1098932;Note=Leucine TTA codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCE65.32c
NC_003888.3	RefSeq	ribosome_entry_site	3862698	3862701	.	-	.	ID=id4409;gbkey=RBS
NC_003888.3	RefSeq	gene	3863148	3863927	.	-	.	ID=gene3521;Dbxref=GeneID:1098933;Name=SCE65.33c;gbkey=Gene;gene=SCE65.33c;gene_biotype=protein_coding;gene_synonym=SCE65.33c;locus_tag=SCO3497
NC_003888.3	RefSeq	CDS	3863148	3863927	.	-	0	ID=cds3453;Parent=gene3521;Dbxref=Genbank:NP_627698.1,GeneID:1098933;Name=NP_627698.1;Note=SCE65.33c%2C probable polyguluronate lyase precursor%2C len: 259 aa%3B highly similar to TR:BAA83339 (EMBL:AB030481) Corynebacterium sp. ALY-1 polyguluronate lyase precursor (EC 4.2.2.11) AlyPG%2C 256 aa%3B fasta scores: opt: 1329 z-score: 1518.4 E(): 0%3B 76.9%25 identity in 260 aa overlap. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCE65.33c;product=polyguluronate lyase;protein_id=NP_627698.1;transl_table=11
NC_003888.3	RefSeq	gene	3863976	3865052	.	-	.	ID=gene3522;Dbxref=GeneID:1098934;Name=SCE65.34c;gbkey=Gene;gene=SCE65.34c;gene_biotype=protein_coding;gene_synonym=SCE65.34c;locus_tag=SCO3498
NC_003888.3	RefSeq	CDS	3863976	3865052	.	-	0	ID=cds3454;Parent=gene3522;Dbxref=Genbank:NP_627699.1,GeneID:1098934;Name=NP_627699.1;Note=SCE65.34c%2C possible hypothetical protein%2C len: 358 aa%3B similar to TR:P94576 (EMBL:Z82987) Bacillus subtilis hypothetical 51.5 kD protein YwoF%2C 468 aa%3B fasta scores: opt: 171 z-score: 188.8 E(): 0.0038%3B 24.1%25 identity in 403 aa overlap. Contains possible N-terminal region signal peptide sequence and Leucine TTA codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCE65.34c;product=hypothetical protein;protein_id=NP_627699.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3865011	3865013	.	-	.	ID=id4410;Dbxref=GeneID:1098934;Note=Leucine TTA codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCE65.34c
NC_003888.3	RefSeq	gene	3865049	3865636	.	-	.	ID=gene3523;Dbxref=GeneID:1098935;Name=SCE65.35c;gbkey=Gene;gene=SCE65.35c;gene_biotype=protein_coding;gene_synonym=SCE65.35c;locus_tag=SCO3499
NC_003888.3	RefSeq	CDS	3865049	3865636	.	-	0	ID=cds3455;Parent=gene3523;Dbxref=Genbank:NP_627700.1,GeneID:1098935;Name=NP_627700.1;Note=SCE65.35c%2C possible integral membrane protein%2C len: 585 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE65.35c;product=hypothetical protein;protein_id=NP_627700.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3865061	3865064	.	-	.	ID=id4411;Dbxref=GeneID:1098935;gbkey=RBS;gene=SCE65.35c
NC_003888.3	RefSeq	ribosome_entry_site	3865643	3865646	.	-	.	ID=id4412;gbkey=RBS
NC_003888.3	RefSeq	gene	3865647	3867689	.	-	.	ID=gene3524;Dbxref=GeneID:1098936;Name=SCE134.01c;gbkey=Gene;gene=SCE134.01c;gene_biotype=protein_coding;gene_synonym=SCE134.01c,SCE65.36c;locus_tag=SCO3500
NC_003888.3	RefSeq	CDS	3865647	3867689	.	-	0	ID=cds3456;Parent=gene3524;Dbxref=Genbank:NP_733607.1,GeneID:1098936;Name=NP_733607.1;Note=SCE134.01c%2C partial CDS%2C unknown%2C len: >671aa%3B~SCE65.36c%2C unknown (partial CDS)%2C len: >41 aa%3B identical to previously sequenced TR:CAB41199 (EMBL:AL049661) Streptomyces coelicolor SCE134.01c;gbkey=CDS;gene=SCE134.01c;product=hypothetical protein;protein_id=NP_733607.1;transl_table=11
NC_003888.3	RefSeq	gene	3867696	3869381	.	-	.	ID=gene3525;Dbxref=GeneID:1098937;Name=SCE134.02c;gbkey=Gene;gene=SCE134.02c;gene_biotype=protein_coding;gene_synonym=SCE134.02c;locus_tag=SCO3501
NC_003888.3	RefSeq	CDS	3867696	3869381	.	-	0	ID=cds3457;Parent=gene3525;Dbxref=Genbank:NP_627701.1,GeneID:1098937;Name=NP_627701.1;Note=SCE134.02c%2C unknown%2C len: 561aa;gbkey=CDS;gene=SCE134.02c;product=hypothetical protein;protein_id=NP_627701.1;transl_table=11
NC_003888.3	RefSeq	gene	3869438	3870205	.	-	.	ID=gene3526;Dbxref=GeneID:1098938;Name=SCE134.03c;gbkey=Gene;gene=SCE134.03c;gene_biotype=protein_coding;gene_synonym=SCE134.03c;locus_tag=SCO3502
NC_003888.3	RefSeq	CDS	3869438	3870205	.	-	0	ID=cds3458;Parent=gene3526;Dbxref=Genbank:NP_627702.1,GeneID:1098938;Name=NP_627702.1;Note=SCE134.03c%2C possible 3-oxoacyl-[acyl carrier protein] reductase%2C len: 255 aa%3B similar to many e.g. SW:FABG_BACSU 3-oxoacyl-[acyl carrier protein] reductase from Bacillus subtilis (246 aa) fasta scores%3B opt: 522%2C z-score: 518.3%2C E(): 1.5e-21%2C (38.1%25 identity in 247 aa overlap). Contains Pfam matches to entries PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SCE134.03c;product=3-oxoacyl-ACP reductase;protein_id=NP_627702.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3869462	3869554	.	-	.	ID=id4413;Dbxref=GeneID:1098938;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 46.40%2C E-value 6.2e-10.;gbkey=misc_feature;gene=SCE134.03c
NC_003888.3	RefSeq	sequence_feature	3869618	3870184	.	-	.	ID=id4414;Dbxref=GeneID:1098938;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 194.70%2C E-value 1.4e-54.;gbkey=misc_feature;gene=SCE134.03c
NC_003888.3	RefSeq	gene	3870261	3871100	.	-	.	ID=gene3527;Dbxref=GeneID:1098939;Name=SCE134.04c;gbkey=Gene;gene=SCE134.04c;gene_biotype=protein_coding;gene_synonym=SCE134.04c;locus_tag=SCO3503
NC_003888.3	RefSeq	CDS	3870261	3871100	.	-	0	ID=cds3459;Parent=gene3527;Dbxref=Genbank:NP_627703.1,GeneID:1098939;Name=NP_627703.1;Note=SCE134.04c%2C possible binding protein dependent transport protein%2C len: 279aa%3B similar to many egs. SW:YURM_BACSU hypothetical ABC transporter permease from Bacillus subtilis (300 aa) fasta scores%3B opt: 424%2C z-score: 513.6%2C E(): 2.7e-21%2C (32.4%25 identity in 281 aa overlap) and SW:UGPE_ECOLI Sn-glycerol-3-phosphate transport permease from Escherichia coli (281 aa) fasta scores%3B opt: 350%2C z-score: 425.7%2C E(): 2.1e-16%2C (29.6%25 identity in 284 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=CDS;gene=SCE134.04c;product=binding protein dependent transport protein;protein_id=NP_627703.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3870381	3870611	.	-	.	ID=id4415;Dbxref=GeneID:1098939;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 68.70%2C E-value 1.2e-16.;gbkey=misc_feature;gene=SCE134.04c
NC_003888.3	RefSeq	gene	3871177	3872160	.	-	.	ID=gene3528;Dbxref=GeneID:1098940;Name=SCE134.05c;gbkey=Gene;gene=SCE134.05c;gene_biotype=protein_coding;gene_synonym=SCE134.05c;locus_tag=SCO3504
NC_003888.3	RefSeq	CDS	3871177	3872160	.	-	0	ID=cds3460;Parent=gene3528;Dbxref=Genbank:NP_627704.1,GeneID:1098940;Name=NP_627704.1;Note=SCE134.05c%2C possible binding protein dependent transport protein%2C len: 327aa%3B similar to many egs. SW:YURN_BACSU hypothetical ABC transporter permease from Bacillus subtilis (292 aa) fasta scores%3B opt: 586%2C z-score: 707.9%2C E(): 4.1e-32%2C (32.4%25 identity in 287 aa overlap) and SW:UGPA_ECOLI Sn-glycerol-3-phosphate transport permease from Escherichia coli (295 aa) fasta scores%3B opt: 583%2C z-score: 704.3%2C E(): 6.5e-32%2C (33.8%25 identity in 290 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp signature.;gbkey=CDS;gene=SCE134.05c;product=binding protein dependent transport protein;protein_id=NP_627704.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3871291	3871527	.	-	.	ID=id4416;Dbxref=GeneID:1098940;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 73.20%2C E-value 5.4e-18.;gbkey=misc_feature;gene=SCE134.05c
NC_003888.3	RefSeq	sequence_feature	3871438	3871524	.	-	.	ID=id4417;Dbxref=GeneID:1098940;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp signature.;gbkey=misc_feature;gene=SCE134.05c
NC_003888.3	RefSeq	gene	3872165	3873454	.	-	.	ID=gene3529;Dbxref=GeneID:1098941;Name=SCE134.06c;gbkey=Gene;gene=SCE134.06c;gene_biotype=protein_coding;gene_synonym=SCE134.06c;locus_tag=SCO3505
NC_003888.3	RefSeq	CDS	3872165	3873454	.	-	0	ID=cds3461;Parent=gene3529;Dbxref=Genbank:NP_627705.1,GeneID:1098941;Name=NP_627705.1;Note=SCE134.06c%2C possible  substrate binding protein%2C len: 429aa%3B weak similarity to many egs. TR:O87856 (EMBL:AL031013)   sugar binding protein from Streptomyces coelicolor (438 aa) fasta scores%3B opt: 368%2C z-score: 408.8%2C E(): 1.9e-15%2C (26.2%25 identity in 428 aa overlap) and SW:MALE_ECOLI maltose-binding protein from Escherichia coli (396 aa) fasta scores%3B opt: 188%2C z-score: 211.5%2C E(): 0.00018%2C (23.0%25 identity in 374 aa overlap). Contains probable N-terminal signal sequence and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCE134.06c;product=substrate binding protein;protein_id=NP_627705.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3873368	3873400	.	-	.	ID=id4418;Dbxref=GeneID:1098941;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCE134.06c
NC_003888.3	RefSeq	gene	3873615	3874676	.	+	.	ID=gene3530;Dbxref=GeneID:1098942;Name=SCE134.07;gbkey=Gene;gene=SCE134.07;gene_biotype=protein_coding;gene_synonym=SCE134.07;locus_tag=SCO3506
NC_003888.3	RefSeq	CDS	3873615	3874676	.	+	0	ID=cds3462;Parent=gene3530;Dbxref=Genbank:NP_627706.1,GeneID:1098942;Name=NP_627706.1;Note=SCE134.07%2C possible lacI-family transcriptional regulator%2C len: 353 aa%3B similar to many e.g. SW:MALR_STRCO maltose operon transcriptional repressor MalR from Streptomyces coelicolor (344 aa) fasta scores%3B opt: 440%2C z-score: 508.9%2C E(): 4.9e-21%2C (32.4%25 identity in 352 aa overlap). Contains Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.;gbkey=CDS;gene=SCE134.07;product=LacI family transcriptional regulator;protein_id=NP_627706.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3873618	3873701	.	+	.	ID=id4419;Dbxref=GeneID:1098942;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 29.40%2C E-value 9.5e-07.;gbkey=misc_feature;gene=SCE134.07
NC_003888.3	RefSeq	sequence_feature	3873795	3874553	.	+	.	ID=id4420;Dbxref=GeneID:1098942;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 94.40%2C E-value 2.3e-24.;gbkey=misc_feature;gene=SCE134.07
NC_003888.3	RefSeq	gene	3874761	3876263	.	+	.	ID=gene3531;Dbxref=GeneID:1098943;Name=SCE134.08;gbkey=Gene;gene=SCE134.08;gene_biotype=protein_coding;gene_synonym=SCE134.08;locus_tag=SCO3507
NC_003888.3	RefSeq	CDS	3874761	3876263	.	+	0	ID=cds3463;Parent=gene3531;Dbxref=Genbank:NP_627707.1,GeneID:1098943;Name=NP_627707.1;Note=SCE134.08%2C possible integral membrane efflux protein%2C len: 500aa%3B similar to many mostly involved in antibiotic efflux eg. TR:Q50396 (EMBL:U46844) from the ethambutol resistance gene cluster of Mycobacterium tuberculosis (412 aa) fasta scores%3B opt: 780%2C z-score: 854.0%2C E(): 0%2C (36.7%25 identity in 401 aa overlap). Contains several possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE134.08;product=integral membrane efflux protein;protein_id=NP_627707.1;transl_table=11
NC_003888.3	RefSeq	gene	3877191	3877628	.	+	.	ID=gene3532;Dbxref=GeneID:1098944;Name=SCE134.09;gbkey=Gene;gene=SCE134.09;gene_biotype=protein_coding;gene_synonym=SCE134.09;locus_tag=SCO3508
NC_003888.3	RefSeq	CDS	3877191	3877628	.	+	0	ID=cds3464;Parent=gene3532;Dbxref=Genbank:NP_627708.1,GeneID:1098944;Name=NP_627708.1;Note=SCE134.09%2C possible maturase-related protein%2C len: 145aa%3B similar to many proposed maturase-related protein from prokaryotes eg. TR:O53616 (EMBL:AL021428) maturase homolog from Mycobacterium tuberculosis (235 aa) fasta scores%3B opt: 251%2C z-score: 315.3%2C E(): 3e-10%2C (56.9%25 identity in 72 aa overlap).;gbkey=CDS;gene=SCE134.09;product=maturase-like protein;protein_id=NP_627708.1;transl_table=11
NC_003888.3	RefSeq	gene	3877697	3878659	.	+	.	ID=gene3533;Dbxref=GeneID:1098945;Name=SCE134.10;gbkey=Gene;gene=SCE134.10;gene_biotype=protein_coding;gene_synonym=SCE134.10;locus_tag=SCO3509
NC_003888.3	RefSeq	CDS	3877697	3878659	.	+	0	ID=cds3465;Parent=gene3533;Dbxref=Genbank:NP_627709.1,GeneID:1098945;Name=NP_627709.1;Note=SCE134.10%2C unknown%2C len: 320 aa%3B weakly similar to SW:YD75_HAEIN hypothetical protein from Haemophilus influenzae (302 aa) fasta scores%3B opt: 308%2C z-score: 377.0%2C E(): 1.1e-13%2C (23.6%25 identity in 301 aa overlap) and similar to TR:Q9L1X0 (EMBL:AL138667) Streptomyces coelicolor hypothetical protein SC3D9.09%2C 350 aa%3B fasta scores: opt: 589 Z-score: 696.5 E(): 3.6e-31%3B 46.006%25 identity in 313 aa overlap;gbkey=CDS;gene=SCE134.10;product=hypothetical protein;protein_id=NP_627709.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	3878668	3878713	.	+	.	ID=id4421;Note=Perfect 20 base inverted repeat with 6 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3878757	3879503	.	-	.	ID=gene3534;Dbxref=GeneID:1098946;Name=SCE134.11c;gbkey=Gene;gene=SCE134.11c;gene_biotype=protein_coding;gene_synonym=SCE134.11c;locus_tag=SCO3510
NC_003888.3	RefSeq	CDS	3878757	3879503	.	-	0	ID=cds3466;Parent=gene3534;Dbxref=Genbank:NP_627710.1,GeneID:1098946;Name=NP_627710.1;Note=SCE134.11c%2C possible DNA methylase%2C len: 248 aa%3B similar to many e.g. TR:O68789 (EMBL:AF053947) adenine methyltransferase homolog from Yersinia pestis (213 aa) fasta scores%3B opt: 246%2C z-score: 300.2%2C E(): 2.1e-09%2C (30.8%25 identity in 224 aa overlap). Contains Prosite match to PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=CDS;gene=SCE134.11c;product=DNA methylase;protein_id=NP_627710.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3879411	3879431	.	-	.	ID=id4422;Dbxref=GeneID:1098946;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;gene=SCE134.11c
NC_003888.3	RefSeq	gene	3880083	3881228	.	+	.	ID=gene3535;Dbxref=GeneID:1098947;Name=SCE134.12;gbkey=Gene;gene=SCE134.12;gene_biotype=protein_coding;gene_synonym=SCE134.12;locus_tag=SCO3511
NC_003888.3	RefSeq	CDS	3880083	3881228	.	+	0	ID=cds3467;Parent=gene3535;Dbxref=Genbank:NP_627711.1,GeneID:1098947;Name=NP_627711.1;Note=SCE134.12%2C possible lipoprotein%2C len: 381aa%3B similar to many%2C mostly hypotheticals%2C eg. TR:P71594 (EMBL:Z80233) hypothetical protein from Mycobacterium tuberculosis (281 aa) fasta scores%3B opt: 288%2C z-score: 295.1%2C E(): 4e-09%2C (40.9%25 identity in 132 aa overlap). Also similar to SW:SPR_ECOLI lipoprotein Spr precusror from Escherichia coli (188 aa) fasta scores%3B opt: 201%2C z-score: 211.7%2C E(): 0.00018%2C (37.2%25 identity in 113 aa overlap). Contains a possible N-terminal signal sequence and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family domain of unknown function.;gbkey=CDS;gene=SCE134.12;product=lipoprotein;protein_id=NP_627711.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3880155	3880187	.	+	.	ID=id4423;Dbxref=GeneID:1098947;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCE134.12
NC_003888.3	RefSeq	sequence_feature	3880869	3881222	.	+	.	ID=id4424;Dbxref=GeneID:1098947;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 96.80%2C E-value 4.1e-25.;gbkey=misc_feature;gene=SCE134.12
NC_003888.3	RefSeq	gene	3881317	3881625	.	+	.	ID=gene3536;Dbxref=GeneID:1098948;Name=SCE134.13;gbkey=Gene;gene=SCE134.13;gene_biotype=protein_coding;gene_synonym=SCE134.13;locus_tag=SCO3512
NC_003888.3	RefSeq	CDS	3881317	3881625	.	+	0	ID=cds3468;Parent=gene3536;Dbxref=Genbank:NP_627712.1,GeneID:1098948;Name=NP_627712.1;Note=SCE134.13%2C possible integral membrane protein%2C len: 102 aa%3B similar to TR:Q9L1N2 (EMBL:AL138977) Streptomyces coelicolor  membrane protein SC7F9.35c%2C 104 aa%3B fasta scores: opt: 545 Z-score: 647.4 E(): 2e-28%3B 79.412%25 identity in 102 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE134.13;product=hypothetical protein;protein_id=NP_627712.1;transl_table=11
NC_003888.3	RefSeq	gene	3881625	3882305	.	+	.	ID=gene3537;Dbxref=GeneID:1098949;Name=SCE134.14;gbkey=Gene;gene=SCE134.14;gene_biotype=protein_coding;gene_synonym=SCE134.14;locus_tag=SCO3513
NC_003888.3	RefSeq	CDS	3881625	3882305	.	+	0	ID=cds3469;Parent=gene3537;Dbxref=Genbank:NP_627713.1,GeneID:1098949;Name=NP_627713.1;Note=SCE134.14%2C possible hypothetical protein%2C len: 226 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCE134.14;product=hypothetical protein;protein_id=NP_627713.1;transl_table=11
NC_003888.3	RefSeq	gene	3882333	3883742	.	+	.	ID=gene3538;Dbxref=GeneID:1098950;Name=SCE134.15;gbkey=Gene;gene=SCE134.15;gene_biotype=protein_coding;gene_synonym=SCE134.15;locus_tag=SCO3514
NC_003888.3	RefSeq	CDS	3882333	3883742	.	+	0	ID=cds3470;Parent=gene3538;Dbxref=Genbank:NP_627714.1,GeneID:1098950;Name=NP_627714.1;Note=SCE134.15%2C possible integral membrane ATP-binding protein%2C len: 469aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCE134.15;product=ATP-binding protein;protein_id=NP_627714.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3883050	3883073	.	+	.	ID=id4425;Dbxref=GeneID:1098950;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE134.15
NC_003888.3	RefSeq	gene	3883874	3885340	.	+	.	ID=gene3539;Dbxref=GeneID:1098951;Name=SCE134.16;gbkey=Gene;gene=SCE134.16;gene_biotype=protein_coding;gene_synonym=SCE134.16;locus_tag=SCO3515
NC_003888.3	RefSeq	CDS	3883874	3885340	.	+	0	ID=cds3471;Parent=gene3539;Dbxref=Genbank:NP_627715.1,GeneID:1098951;Name=NP_627715.1;Note=SCE134.16%2C possible integral membrane protein%2C len: 488aa%3B contains a possible membrane spanning hydrophobic region.;gbkey=CDS;gene=SCE134.16;product=hypothetical protein;protein_id=NP_627715.1;transl_table=11
NC_003888.3	RefSeq	gene	3885367	3885819	.	+	.	ID=gene3540;Dbxref=GeneID:1098952;Name=SCE134.17;gbkey=Gene;gene=SCE134.17;gene_biotype=protein_coding;gene_synonym=SCE134.17;locus_tag=SCO3516
NC_003888.3	RefSeq	CDS	3885367	3885819	.	+	0	ID=cds3472;Parent=gene3540;Dbxref=Genbank:NP_627716.1,GeneID:1098952;Name=NP_627716.1;Note=SCE134.17%2C unknown%2C len: 150aa;gbkey=CDS;gene=SCE134.17;product=hypothetical protein;protein_id=NP_627716.1;transl_table=11
NC_003888.3	RefSeq	gene	3885882	3887351	.	+	.	ID=gene3541;Dbxref=GeneID:1098953;Name=SCE134.18;gbkey=Gene;gene=SCE134.18;gene_biotype=protein_coding;gene_synonym=SCE134.18;locus_tag=SCO3517
NC_003888.3	RefSeq	CDS	3885882	3887351	.	+	0	ID=cds3473;Parent=gene3541;Dbxref=Genbank:NP_627717.1,GeneID:1098953;Name=NP_627717.1;Note=SCE134.18%2C possible ATP-binding protein%2C len: 489aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Similar to TR:Q9L1N7 (EMBL:AL138977) from Streptomyces coelicolor (507 aa) fasta scores%3B opt: 2405%2C Z-score: 2578.8%2C 73.469%25 identity (75.000%25 ungapped) in 490 aa overlap.;gbkey=CDS;gene=SCE134.18;product=ATP-binding protein;protein_id=NP_627717.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3886266	3886289	.	+	.	ID=id4426;Dbxref=GeneID:1098953;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE134.18
NC_003888.3	RefSeq	gene	3887444	3888079	.	+	.	ID=gene3542;Dbxref=GeneID:1098954;Name=SCE134.19;gbkey=Gene;gene=SCE134.19;gene_biotype=protein_coding;gene_synonym=SCE134.19;locus_tag=SCO3518
NC_003888.3	RefSeq	CDS	3887444	3888079	.	+	0	ID=cds3474;Parent=gene3542;Dbxref=Genbank:NP_627718.1,GeneID:1098954;Name=NP_627718.1;Note=SCE134.19%2C unknown%2C len: aa;gbkey=CDS;gene=SCE134.19;product=hypothetical protein;protein_id=NP_627718.1;transl_table=11
NC_003888.3	RefSeq	gene	3888210	3888821	.	+	.	ID=gene3543;Dbxref=GeneID:1098955;Name=SCE134.20;gbkey=Gene;gene=SCE134.20;gene_biotype=protein_coding;gene_synonym=SCE134.20;locus_tag=SCO3519
NC_003888.3	RefSeq	CDS	3888210	3888821	.	+	0	ID=cds3475;Parent=gene3543;Dbxref=Genbank:NP_627719.1,GeneID:1098955;Name=NP_627719.1;Note=SCE134.20%2C unknown%2C len: 203aa;gbkey=CDS;gene=SCE134.20;product=hypothetical protein;protein_id=NP_627719.1;transl_table=11
NC_003888.3	RefSeq	gene	3888872	3889636	.	+	.	ID=gene3544;Dbxref=GeneID:1098956;Name=SCE134.21;gbkey=Gene;gene=SCE134.21;gene_biotype=protein_coding;gene_synonym=SCE134.21,SCE2.01;locus_tag=SCO3520
NC_003888.3	RefSeq	CDS	3888872	3889636	.	+	0	ID=cds3476;Parent=gene3544;Dbxref=Genbank:NP_627720.1,GeneID:1098956;Name=NP_627720.1;Note=SCE2.01%2C unknown%2C len: 254aa%3B~SCE134.21%2C partial CDS%2C unknown%2C len: >203aa;gbkey=CDS;gene=SCE134.21;product=hypothetical protein;protein_id=NP_627720.1;transl_table=11
NC_003888.3	RefSeq	gene	3889752	3890456	.	-	.	ID=gene3545;Dbxref=GeneID:1098957;Name=SCE2.02c;gbkey=Gene;gene=SCE2.02c;gene_biotype=protein_coding;gene_synonym=SCE2.02c;locus_tag=SCO3521
NC_003888.3	RefSeq	CDS	3889752	3890456	.	-	0	ID=cds3477;Parent=gene3545;Dbxref=Genbank:NP_627721.1,GeneID:1098957;Name=NP_627721.1;Note=SCE2.02c%2C possible integral membrane protein%2C len: 234 aa%3B similar to TR:P96876 (EMBL:Z92771) hypothetical protein from Mycobacterium tuberculosis (222 aa) fasta scores%3B opt: 357%2C z-score: 430.7%2C E(): 1.1e-16%2C (33.8%25 identity in 195 aa overlap). Contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SCE2.02c;product=hypothetical protein;protein_id=NP_627721.1;transl_table=11
NC_003888.3	RefSeq	gene	3890457	3890792	.	-	.	ID=gene3546;Dbxref=GeneID:1098958;Name=SCE2.03c;gbkey=Gene;gene=SCE2.03c;gene_biotype=protein_coding;gene_synonym=SCE2.03c;locus_tag=SCO3522
NC_003888.3	RefSeq	CDS	3890457	3890792	.	-	0	ID=cds3478;Parent=gene3546;Dbxref=Genbank:NP_627722.1,GeneID:1098958;Name=NP_627722.1;Note=SCE2.03c%2C possible transcriptional regulator%2C len: 111aa%3B similar to many egs. SW:YW25_MYCTU hypothetical transcriptional regulator from Mycobacterium tuberculosis (118 aa) fasta scores%3B opt: 348%2C z-score: 457.9%2C E(): 3.4e-18%2C (52.9%25 identity in 102 aa overlap) and SW:ARSR_STAXY arsenical ersistance operon repressor from Staphylococcus xylosus plasmid pSX267 (104 aa) fasta scores%3B opt: 126%2C z-score: 176.8%2C E(): 0.016%2C (30.4%25 identity in 102 aa overlap). Contains Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=SCE2.03c;product=transcriptional regulator;protein_id=NP_627722.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3890517	3890750	.	-	.	ID=id4427;Dbxref=GeneID:1098958;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 64.90%2C E-value 1.7e-15.;gbkey=misc_feature;gene=SCE2.03c
NC_003888.3	RefSeq	gene	3891104	3891829	.	+	.	ID=gene3547;Dbxref=GeneID:1098959;Name=SCE2.04;gbkey=Gene;gene=SCE2.04;gene_biotype=protein_coding;gene_synonym=SCE2.04;locus_tag=SCO3523
NC_003888.3	RefSeq	CDS	3891104	3891829	.	+	0	ID=cds3479;Parent=gene3547;Dbxref=Genbank:NP_627723.1,GeneID:1098959;Name=NP_627723.1;Note=SCE2.04%2C unknown%2C len: 241aa;gbkey=CDS;gene=SCE2.04;product=hypothetical protein;protein_id=NP_627723.1;transl_table=11
NC_003888.3	RefSeq	gene	3891921	3892586	.	+	.	ID=gene3548;Dbxref=GeneID:1098960;Name=SCE2.05;gbkey=Gene;gene=SCE2.05;gene_biotype=protein_coding;gene_synonym=SCE2.05;locus_tag=SCO3524
NC_003888.3	RefSeq	CDS	3891921	3892586	.	+	0	ID=cds3480;Parent=gene3548;Dbxref=Genbank:NP_627724.1,GeneID:1098960;Name=NP_627724.1;Note=SCE2.05%2C unknown%2C len: 221aa;gbkey=CDS;gene=SCE2.05;product=hypothetical protein;protein_id=NP_627724.1;transl_table=11
NC_003888.3	RefSeq	gene	3892682	3893122	.	+	.	ID=gene3549;Dbxref=GeneID:1098961;Name=SCE2.06;gbkey=Gene;gene=SCE2.06;gene_biotype=protein_coding;gene_synonym=SCE2.06;locus_tag=SCO3525
NC_003888.3	RefSeq	CDS	3892682	3893122	.	+	0	ID=cds3481;Parent=gene3549;Dbxref=Genbank:NP_627725.1,GeneID:1098961;Name=NP_627725.1;Note=SCE2.06%2C membrane protein%2C len: 146 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCE2.06;product=hypothetical protein;protein_id=NP_627725.1;transl_table=11
NC_003888.3	RefSeq	gene	3893187	3894470	.	+	.	ID=gene3550;Dbxref=GeneID:1098962;Name=SCE2.07;gbkey=Gene;gene=SCE2.07;gene_biotype=protein_coding;gene_synonym=SCE2.07;locus_tag=SCO3526
NC_003888.3	RefSeq	CDS	3893187	3894470	.	+	0	ID=cds3482;Parent=gene3550;Dbxref=Genbank:NP_627726.1,GeneID:1098962;Name=NP_627726.1;Note=SCE2.07%2C hypothetical protein%2C len: 427 aa%3B C-terminal region similar to TR:Q9L1W2 (EMBL:AL138667) Streptomyces coelicolor hypothetical protein (fragment) SC3D9.17c%2C 235 aa%3B fasta scores: opt: 1120 Z-score: 1250.9 E(): 4.8e-62%3B 71.795%25 identity in 234 aa overlap;gbkey=CDS;gene=SCE2.07;product=hypothetical protein;protein_id=NP_627726.1;transl_table=11
NC_003888.3	RefSeq	gene	3894467	3894697	.	+	.	ID=gene3551;Dbxref=GeneID:1098963;Name=SCE2.08;gbkey=Gene;gene=SCE2.08;gene_biotype=protein_coding;gene_synonym=SCE2.08;locus_tag=SCO3527
NC_003888.3	RefSeq	CDS	3894467	3894697	.	+	0	ID=cds3483;Parent=gene3551;Dbxref=Genbank:NP_627727.1,GeneID:1098963;Name=NP_627727.1;Note=SCE2.08%2C unknown%2C len: 76aa;gbkey=CDS;gene=SCE2.08;product=hypothetical protein;protein_id=NP_627727.1;transl_table=11
NC_003888.3	RefSeq	gene	3894706	3895866	.	+	.	ID=gene3552;Dbxref=GeneID:1098964;Name=SCE2.09;gbkey=Gene;gene=SCE2.09;gene_biotype=protein_coding;gene_synonym=SCE2.09;locus_tag=SCO3528
NC_003888.3	RefSeq	CDS	3894706	3895866	.	+	0	ID=cds3484;Parent=gene3552;Dbxref=Genbank:NP_627728.1,GeneID:1098964;Name=NP_627728.1;Note=SCE2.09%2C unknown%2C len: 386 aa%3B weak similarity to several predicted helicases e.g. SW:DNAB_TREPA replicative DNA helicase from Treponema pallidum (438 aa) fasta scores%3B opt: 188%2C z-score: 190.6%2C E(): 0.0027%2C (36.5%25 identity in 156 aa overlap) and similar to TR:Q9L1W8 (EMBL:AL138667) Streptomyces coelicolor hypothetical protein SC3D9.11c%2C 372 aa%3B fasta scores: opt: 559 Z-score: 528.6 E(): 8.2e-22%3B 37.466%25 identity in 363 aa overlap;gbkey=CDS;gene=SCE2.09;product=hypothetical protein;protein_id=NP_627728.1;transl_table=11
NC_003888.3	RefSeq	gene	3896197	3896718	.	-	.	ID=gene3553;Dbxref=GeneID:1098965;Name=SCE2.10c;gbkey=Gene;gene=SCE2.10c;gene_biotype=protein_coding;gene_synonym=SCE2.10c;locus_tag=SCO3529
NC_003888.3	RefSeq	CDS	3896197	3896718	.	-	0	ID=cds3485;Parent=gene3553;Dbxref=Genbank:NP_627729.1,GeneID:1098965;Name=NP_627729.1;Note=SCE2.10c%2C unknown%2C len: 173aa;gbkey=CDS;gene=SCE2.10c;product=hypothetical protein;protein_id=NP_627729.1;transl_table=11
NC_003888.3	RefSeq	gene	3897241	3897840	.	+	.	ID=gene3554;Dbxref=GeneID:1098966;Name=SCE2.11;gbkey=Gene;gene=SCE2.11;gene_biotype=protein_coding;gene_synonym=SCE2.11;locus_tag=SCO3530
NC_003888.3	RefSeq	CDS	3897241	3897840	.	+	0	ID=cds3486;Parent=gene3554;Dbxref=Genbank:NP_627730.1,GeneID:1098966;Name=NP_627730.1;Note=SCE2.11%2C unknown%2C len: 199 aa%3B similar to TR:Q9L1M9 (EMBL:AL138977) Streptomyces coelicolor hypothetical protein SC7F9.38%2C 211 aa%3B fasta scores: opt: 562 Z-score: 634.5 E(): 1e-27%3B 44.444%25 identity in 189 aa overlap;gbkey=CDS;gene=SCE2.11;product=hypothetical protein;protein_id=NP_627730.1;transl_table=11
NC_003888.3	RefSeq	gene	3897837	3898616	.	+	.	ID=gene3555;Dbxref=GeneID:1098967;Name=SCE2.12;gbkey=Gene;gene=SCE2.12;gene_biotype=protein_coding;gene_synonym=SCE2.12;locus_tag=SCO3531
NC_003888.3	RefSeq	CDS	3897837	3898616	.	+	0	ID=cds3487;Parent=gene3555;Dbxref=Genbank:NP_627731.1,GeneID:1098967;Name=NP_627731.1;Note=SCE2.12%2C unknown%2C len: 259aa%3B similar to TR:Q9L1M6 (EMBL:AL138977) SC7F9.41 hypothetical protein from Streptomyces coelicolor (246 aa) fasta scores%3B opt: 405%2C Z-score: 481.6%2C E(): 3.4e-19%2C 35.622%25 identity (39.713%25 ungapped) in 233 aa overlap.;gbkey=CDS;gene=SCE2.12;product=hypothetical protein;protein_id=NP_627731.1;transl_table=11
NC_003888.3	RefSeq	gene	3898613	3899089	.	+	.	ID=gene3556;Dbxref=GeneID:1098968;Name=SCE2.13;gbkey=Gene;gene=SCE2.13;gene_biotype=protein_coding;gene_synonym=SCE2.13;locus_tag=SCO3532
NC_003888.3	RefSeq	CDS	3898613	3899089	.	+	0	ID=cds3488;Parent=gene3556;Dbxref=Genbank:NP_627732.1,GeneID:1098968;Name=NP_627732.1;Note=SCE2.13%2C unknown%2C len: 158aa;gbkey=CDS;gene=SCE2.13;product=hypothetical protein;protein_id=NP_627732.1;transl_table=11
NC_003888.3	RefSeq	gene	3899086	3899751	.	+	.	ID=gene3557;Dbxref=GeneID:1098969;Name=SCE2.14;gbkey=Gene;gene=SCE2.14;gene_biotype=protein_coding;gene_synonym=SCE2.14;locus_tag=SCO3533
NC_003888.3	RefSeq	CDS	3899086	3899751	.	+	0	ID=cds3489;Parent=gene3557;Dbxref=Genbank:NP_627733.1,GeneID:1098969;Name=NP_627733.1;Note=SCE2.14%2C unknown%2C len: 221aa;gbkey=CDS;gene=SCE2.14;product=hypothetical protein;protein_id=NP_627733.1;transl_table=11
NC_003888.3	RefSeq	gene	3899823	3902345	.	+	.	ID=gene3558;Dbxref=GeneID:1098970;Name=SCE2.15;gbkey=Gene;gene=SCE2.15;gene_biotype=protein_coding;gene_synonym=SCE2.15;locus_tag=SCO3534
NC_003888.3	RefSeq	CDS	3899823	3902345	.	+	0	ID=cds3490;Parent=gene3558;Dbxref=Genbank:NP_627734.1,GeneID:1098970;Name=NP_627734.1;Note=SCE2.15%2C possible large ATP-binding protein%2C len: 840aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) and a probable coiled-coil region around 600-650aa.;gbkey=CDS;gene=SCE2.15;product=large ATP-binding protein;protein_id=NP_627734.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3900564	3900587	.	+	.	ID=id4428;Dbxref=GeneID:1098970;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCE2.15
NC_003888.3	RefSeq	gene	3902381	3904501	.	+	.	ID=gene3559;Dbxref=GeneID:1098971;Name=SCE2.16;gbkey=Gene;gene=SCE2.16;gene_biotype=protein_coding;gene_synonym=SCE2.16;locus_tag=SCO3535
NC_003888.3	RefSeq	CDS	3902381	3904501	.	+	0	ID=cds3491;Parent=gene3559;Dbxref=Genbank:NP_627735.1,GeneID:1098971;Name=NP_627735.1;Note=SCE2.16%2C unknown%2C len: 706aa;gbkey=CDS;gene=SCE2.16;product=hypothetical protein;protein_id=NP_627735.1;transl_table=11
NC_003888.3	RefSeq	gene	3904532	3904624	.	+	.	ID=gene3560;Dbxref=GeneID:1098972;Name=SCE2.17;gbkey=Gene;gene=SCE2.17;gene_biotype=pseudogene;gene_synonym=SCE2.17;locus_tag=SCO3536;pseudo=true
NC_003888.3	RefSeq	sequence_feature	3904532	3904624	.	+	.	ID=id4429;Dbxref=GeneID:1098972;Note=SCE2.17%2C partial CDS%2C remnant of a transposase%2C len: 30aa%3B almost identical to the C-terminus of SW:IS12_STRAL transposase from IS112 of Streptomyces albus G (256 aa) fasta scores%3B opt: 190%2C z-score: 357.0%2C E(): 1.4e-12%2C (90.0%25 identity in 30 aa overlap).;gbkey=misc_feature;gene=SCE2.17
NC_003888.3	RefSeq	gene	3904869	3906041	.	-	.	ID=gene3561;Dbxref=GeneID:1098973;Name=SCE2.18c;gbkey=Gene;gene=SCE2.18c;gene_biotype=protein_coding;gene_synonym=SCE2.18c;locus_tag=SCO3537
NC_003888.3	RefSeq	CDS	3904869	3906041	.	-	0	ID=cds3492;Parent=gene3561;Dbxref=Genbank:NP_627736.1,GeneID:1098973;Name=NP_627736.1;Note=SCE2.18c%2C possible DNA-binding protein%2C len: 390 aa%3B similar to TR:O53463 (EMBL:AL021899) regulator from Mycobacterium tuberculosis (346 aa) fasta scores%3B opt: 208%2C z-score: 251.9%2C E(): 1e-06%2C (32.8%25 identity in 302 aa overlap). Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix.;gbkey=CDS;gene=SCE2.18c;product=DNA-binding protein;protein_id=NP_627736.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3905814	3905978	.	-	.	ID=id4430;Dbxref=GeneID:1098973;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 46.20%2C E-value 7.2e-10.;gbkey=misc_feature;gene=SCE2.18c
NC_003888.3	RefSeq	gene	3906058	3906801	.	-	.	ID=gene3562;Dbxref=GeneID:1098974;Name=SCE2.19c;gbkey=Gene;gene=SCE2.19c;gene_biotype=protein_coding;gene_synonym=SCE2.19c;locus_tag=SCO3538
NC_003888.3	RefSeq	CDS	3906058	3906801	.	-	0	ID=cds3493;Parent=gene3562;Dbxref=Genbank:NP_627737.1,GeneID:1098974;Name=NP_627737.1;Note=SCE2.19c%2C unknown%2C len: 247aa;gbkey=CDS;gene=SCE2.19c;product=hypothetical protein;protein_id=NP_627737.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3907032	3907523	.	-	.	ID=id4431;Note=BLASTN hit to Streptomyces coelicolor cosmid J11 (score:2415 (-1) 20475 20966).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3907269	3908108	.	+	.	ID=gene3563;Dbxref=GeneID:1098975;Name=SCE2.20;gbkey=Gene;gene=SCE2.20;gene_biotype=protein_coding;gene_synonym=SCE2.20,SCH5.01;locus_tag=SCO3539
NC_003888.3	RefSeq	CDS	3907269	3908108	.	+	0	ID=cds3494;Parent=gene3563;Dbxref=Genbank:NP_733608.1,GeneID:1098975;Name=NP_733608.1;Note=SCH5.01%2C partial CDS%2C possible transposase%2C len: >228aa%3B similar to many eg. TR:Q54404 (EMBL:Z11519) probable transposase from Tn4811 of Streptomyces lividans 66 (320 aa) fasta scores%3B opt: 535%2C z-score: 648.0%2C E(): 8.7e-29%2C (41.0%25 identity in 227 aa overlap)~SCE2.20%2C partial CDS%2C probable transposase%2C len: >84aa%3B almost identical to TR:D1039642 (EMBL:AB024596) transposase from Streptomyces coelicolor (279 aa) fasta scores%3B opt: 596%2C z-score: 817.8%2C E(): 0%2C (98.8%25 identity in 84 aa overlap)%2C note conflicting start codon%2C GTG not ATG. Also similar to many others eg. TR:Q54404 (EMBL:Z11519) from transposable element%2C Tn4811%2C in Streptomyces lividans 66 (320 aa) fasta scores%3B opt: 197%2C z-score: 276.0%2C E(): 4.6e-08%2C (42.9%25 identity in 77 aa overlap).;gbkey=CDS;gene=SCE2.20;product=transposase;protein_id=NP_733608.1;transl_table=11
NC_003888.3	RefSeq	gene	3908335	3908411	.	-	.	ID=gene3564;Dbxref=GeneID:3240031;Name=SCOt28;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt28
NC_003888.3	RefSeq	tRNA	3908335	3908411	.	-	.	ID=rna41;Parent=gene3564;Dbxref=GeneID:3240031;Note=tRNA Thr anticodon CGT%2C Cove score 80.05;gbkey=tRNA;product=tRNA-Thr
NC_003888.3	RefSeq	exon	3908335	3908411	.	-	.	ID=id4432;Parent=rna41;Dbxref=GeneID:3240031;Note=tRNA Thr anticodon CGT%2C Cove score 80.05;gbkey=tRNA;product=tRNA-Thr
NC_003888.3	RefSeq	gene	3908520	3910139	.	-	.	ID=gene3565;Dbxref=GeneID:1098976;Name=SCH5.02c;gbkey=Gene;gene=SCH5.02c;gene_biotype=protein_coding;gene_synonym=SCH5.02c,slpD;locus_tag=SCO3540
NC_003888.3	RefSeq	CDS	3908520	3910139	.	-	0	ID=cds3495;Parent=gene3565;Dbxref=Genbank:NP_627738.1,GeneID:1098976;Name=NP_627738.1;Note=SCH5.02c%2C slpD%2C proteinase (hypothetical protein)%2C len: 539 aa%3B identical to the previously sequenced TR:Q54398 (EMBL:L42758) SlpD%2C mycelium-associated (lipoprotein) proteinase from Streptomyces lividans 66 (539 aa) fasta scores%3B opt: 3608%2C z-score: 3750.3%2C E(): 0%2C (100.0%25 identity in 539 aa overlap). Also similar to two other peptidases from Streptomyces coelicolor SC9C7.15c (EMBL:AL035161) fasta scores%3B opt: 666%2C z-score: 603.6%2C E(): 9.4e-29%2C (35.7%25 identity in 502 aa overlap) and SC1B5.03c (EMBL:AL023517) fasta scores%3B opt: 661%2C z-score: 598.9%2C E(): 1.7e-28%2C (32.6%25 identity in 562 aa overlap). Contains probable N-terminal signal sequence. Also contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 56.80%2C E-value 4.7e-13.;gbkey=CDS;gene=SCH5.02c;product=proteinase;protein_id=NP_627738.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3908562	3909674	.	-	.	ID=id4433;Dbxref=GeneID:1098976;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 56.80%2C E-value 4.7e-13.;gbkey=misc_feature;gene=SCH5.02c
NC_003888.3	RefSeq	gene	3910252	3911457	.	-	.	ID=gene3566;Dbxref=GeneID:1098977;Name=SCH5.03c;gbkey=Gene;gene=SCH5.03c;gene_biotype=protein_coding;gene_synonym=SCH5.03c;locus_tag=SCO3541
NC_003888.3	RefSeq	CDS	3910252	3911457	.	-	0	ID=cds3496;Parent=gene3566;Dbxref=Genbank:NP_627739.1,GeneID:1098977;Name=NP_627739.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;gene=SCH5.03c;product=DNA polymerase III subunit delta';protein_id=NP_627739.1;transl_table=11
NC_003888.3	RefSeq	gene	3911610	3914879	.	-	.	ID=gene3567;Dbxref=GeneID:1098978;Name=SCH5.05c;gbkey=Gene;gene=SCH5.05c;gene_biotype=protein_coding;gene_synonym=SCH5.05c;locus_tag=SCO3542
NC_003888.3	RefSeq	CDS	3911610	3914879	.	-	0	ID=cds3497;Parent=gene3567;Dbxref=Genbank:NP_627740.1,GeneID:1098978;Name=NP_627740.1;Note=SCH5.05c%2C probable integral membrane protein with kinase activity%2C len: 1089 aa%3B a multidomain protein. The N-terminal 480 aa (approx.) contains several probable membrane spanning hydrophobic regions. 510-710 aa similar to several thymidylate kinases e.g. SW:KTHY_ECOLI thymidylate kinase%2C Tmk%2C from Escherichia coli (213 aa) fasta scores%3B opt: 423%2C z-score: 339.7%2C E(): 1.3e-11%2C (38.4%25 identity in 198 aa overlap). 710-800 aa (approx.) glutamic acid-rich region which may form a hinge structure. 800-1089 aa has no distinguishing features or significant database similarities. Further clues to function may be indicated by the presence of matches to PS00217 Sugar transport proteins signature 2 and PS00017 ATP/GTP-binding site motif A (P-loop). Contains Probable coiled-coil from 711 to 875 (165 residues)%2C max score: 2.135%2C (probability 1.00);gbkey=CDS;gene=SCH5.05c;product=integral membrane protein with kinase activity;protein_id=NP_627740.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3912247	3912296	.	-	.	ID=id4434;Dbxref=GeneID:1098978;Note=Alanine rich region.;gbkey=misc_feature;gene=SCH5.05c
NC_003888.3	RefSeq	sequence_feature	3912317	3912722	.	-	.	ID=id4435;Dbxref=GeneID:1098978;Note=Glutamic acid-rich region.;gbkey=misc_feature;gene=SCH5.05c
NC_003888.3	RefSeq	sequence_feature	3913311	3913334	.	-	.	ID=id4436;Dbxref=GeneID:1098978;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCH5.05c
NC_003888.3	RefSeq	sequence_feature	3913647	3913724	.	-	.	ID=id4437;Dbxref=GeneID:1098978;Note=PS00217 Sugar transport proteins signature 2.;gbkey=misc_feature;gene=SCH5.05c
NC_003888.3	RefSeq	gene	3915027	3917885	.	-	.	ID=gene3568;Dbxref=GeneID:1098979;Name=SCH5.06c;gbkey=Gene;gene=SCH5.06c;gene_biotype=protein_coding;gene_synonym=SCH5.06c;locus_tag=SCO3543
NC_003888.3	RefSeq	CDS	3915027	3917885	.	-	0	ID=cds3498;Parent=gene3568;Dbxref=Genbank:NP_627741.1,GeneID:1098979;Name=NP_627741.1;Note=SCH5.06c%2C probable DNA topoisomerase I%2C len: 952 aa%3B high levels of similarity to many e.g. SW:TOP1_MYCTU DNA topoisomerase I from Mycobacterium tuberculosis (900 aa) fasta scores%3B opt: 2586%2C z-score: 2586.7%2C E(): 0%2C (58.6%25 identity in 846 aa overlap). Contains PS00396 Prokaryotic DNA topoisomerase I active site and Pfam match to entry PF01131 Topoisom_bac%2C Prokayotic DNA topoisomerase%2C score 736.60%2C E-value 1.1e-217. Also contains alanine/lysine rich C-terminal region.;gbkey=CDS;gene=SCH5.06c;product=DNA topoisomerase I;protein_id=NP_627741.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3915047	3915197	.	-	.	ID=id4438;Dbxref=GeneID:1098979;Note=Alanine/lysine-rich region.;gbkey=misc_feature;gene=SCH5.06c
NC_003888.3	RefSeq	sequence_feature	3916146	3917846	.	-	.	ID=id4439;Dbxref=GeneID:1098979;Note=Pfam match to entry PF01131 Topoisom_bac%2C Prokayotic DNA topoisomerase%2C score 736.60%2C E-value 1.1e-217.;gbkey=misc_feature;gene=SCH5.06c
NC_003888.3	RefSeq	sequence_feature	3916872	3916916	.	-	.	ID=id4440;Dbxref=GeneID:1098979;Note=PS00396 Prokaryotic DNA topoisomerase I active site.;gbkey=misc_feature;gene=SCH5.06c
NC_003888.3	RefSeq	gene	3918154	3918552	.	-	.	ID=gene3569;Dbxref=GeneID:1098980;Name=SCH5.07c;gbkey=Gene;gene=SCH5.07c;gene_biotype=protein_coding;gene_synonym=SCH5.07c;locus_tag=SCO3544
NC_003888.3	RefSeq	CDS	3918154	3918552	.	-	0	ID=cds3499;Parent=gene3569;Dbxref=Genbank:NP_627742.1,GeneID:1098980;Name=NP_627742.1;Note=SCH5.07c%2C membrane protein%2C len: 132 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH5.07c;product=hypothetical protein;protein_id=NP_627742.1;transl_table=11
NC_003888.3	RefSeq	gene	3918572	3920089	.	-	.	ID=gene3570;Dbxref=GeneID:1098981;Name=SCH5.08c;gbkey=Gene;gene=SCH5.08c;gene_biotype=protein_coding;gene_synonym=SCH5.08c;locus_tag=SCO3545
NC_003888.3	RefSeq	CDS	3918572	3920089	.	-	0	ID=cds3500;Parent=gene3570;Dbxref=Genbank:NP_627743.1,GeneID:1098981;Name=NP_627743.1;Note=SCH5.08c%2C possible transferase%2C len: 505 aa%3B limited similarity to many proteins of undefined function e.g. TR:O27384 (EMBL:AE000896) methyltransferase related protein (196 aa) fasta scores%3B opt: 162%2C z-score: 186.2%2C E(): 0.0046%2C (28.9%25 identity in 152 aa overlap). Contains PS00092 N-6 Adenine-specific DNA methylases signature;gbkey=CDS;gene=SCH5.08c;product=transferase;protein_id=NP_627743.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3919367	3919387	.	-	.	ID=id4441;Dbxref=GeneID:1098981;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;gene=SCH5.08c
NC_003888.3	RefSeq	gene	3920177	3920767	.	-	.	ID=gene3571;Dbxref=GeneID:1098982;Name=SCH5.09c;gbkey=Gene;gene=SCH5.09c;gene_biotype=protein_coding;gene_synonym=SCH5.09c;locus_tag=SCO3546
NC_003888.3	RefSeq	CDS	3920177	3920767	.	-	0	ID=cds3501;Parent=gene3571;Dbxref=Genbank:NP_627744.1,GeneID:1098982;Name=NP_627744.1;Note=SCH5.09c%2C possible small lipoprotein%2C len: 196aa%3B Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site and probable N-terminal signal sequence. Contains probable coiled-coil from 104 to 141 (38 residues)%2C max score: 1.630%2C (probability 1.00).;gbkey=CDS;gene=SCH5.09c;product=hypothetical protein;protein_id=NP_627744.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3920684	3920716	.	-	.	ID=id4442;Dbxref=GeneID:1098982;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCH5.09c
NC_003888.3	RefSeq	gene	3920987	3923371	.	-	.	ID=gene3572;Dbxref=GeneID:1098983;Name=hppA;gbkey=Gene;gene=hppA;gene_biotype=protein_coding;gene_synonym=SCH5.10c;locus_tag=SCO3547
NC_003888.3	RefSeq	CDS	3920987	3923371	.	-	0	ID=cds3502;Parent=gene3572;Dbxref=Genbank:NP_627745.1,GeneID:1098983;Name=NP_627745.1;Note=pyrophosphate-energized proton pump%3B pyrophosphate-energized inorganic pyrophosphatase%3B H+-PPase%3B can cleave pyrophosphate to two phosphates%3B can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient;gbkey=CDS;gene=hppA;product=membrane-bound proton-translocating pyrophosphatase;protein_id=NP_627745.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3922618	3922725	.	+	.	ID=id4443;Note=35 base inverted repeat with possible 37 base loop.;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	3923509	3923514	.	+	.	ID=id4444;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	3923509	3923514	.	-	.	ID=id4445;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3923710	3924141	.	-	.	ID=gene3573;Dbxref=GeneID:1098984;Name=SCH5.11c;gbkey=Gene;gene=SCH5.11c;gene_biotype=protein_coding;gene_synonym=SCH5.11c;locus_tag=SCO3548
NC_003888.3	RefSeq	CDS	3923710	3924141	.	-	0	ID=cds3503;Parent=gene3573;Dbxref=Genbank:NP_627746.1,GeneID:1098984;Name=NP_627746.1;Note=SCH5.11c%2C probable anti-sigma factor%2C len: 143 aa%3B similar to many e.g. SW:RSBW_BACSU RsbW%2C anti-sigma B factor from Bacillus subtilis (160 aa) fasta scores%3B opt: 153%2C z-score: 198.9%2C E(): 0.00089%2C (28.7%25 identity in 136 aa overlap) and SW:SP22_BACSU SpoIIAB%2C anti-sigma F factor%2C sporulation protein%2C from Bacillus subtilis (146 aa) fasta scores%3B opt: 125%2C z-score: 165.8%2C E(): 0.063%2C (29.2%25 identity in 137 aa overlap).;gbkey=CDS;gene=SCH5.11c;product=anti-sigma factor;protein_id=NP_627746.1;transl_table=11
NC_003888.3	RefSeq	gene	3924251	3924592	.	-	.	ID=gene3574;Dbxref=GeneID:1098985;Name=bldG;gbkey=Gene;gene=bldG;gene_biotype=protein_coding;gene_synonym=bldG,SCH5.12c;locus_tag=SCO3549
NC_003888.3	RefSeq	CDS	3924251	3924592	.	-	0	ID=cds3504;Parent=gene3574;Dbxref=Genbank:NP_627747.1,GeneID:1098985;Name=NP_627747.1;Note=SCH5.12c%2C bldG%2C probable anti-sigma factor antagonist%2C len: 113 aa%3B similar to many e.g. SW:RSBV_BACSU RsbV%2C anti-sigma B factor antagonist from Bacillus subtilis (109 aa) fasta scores%3B opt: 255%2C z-score: 341.7%2C E(): 9.9e-12%2C (45.7%25 identity in 94 aa overlap) and SW:SP21_BACSU spoIIAA%2C anti-sigma F factor antagonist (116 aa) fasta scores%3B opt: 179%2C z-score: 244.8%2C E(): 2.5e-06%2C (30.2%25 identity in 96 aa overlap).;gbkey=CDS;gene=bldG;product=anti-sigma factor antagonist;protein_id=NP_627747.1;transl_table=11
NC_003888.3	RefSeq	gene	3924702	3927149	.	+	.	ID=gene3575;Dbxref=GeneID:1098986;Name=SCH5.13;gbkey=Gene;gene=SCH5.13;gene_biotype=protein_coding;gene_synonym=SCH5.13;locus_tag=SCO3550
NC_003888.3	RefSeq	CDS	3924702	3927149	.	+	0	ID=cds3505;Parent=gene3575;Dbxref=Genbank:NP_627748.1,GeneID:1098986;Name=NP_627748.1;Note=SCH5.13%2C possible helicase%2C len: 815 aa%3B similar to many e.g. SW:YPRA_BACSU hypothetical helicase from Bacillus subtilis (749 aa) fasta scores%3B opt: 1616%2C z-score: 1799.2%2C E(): 0%2C (37.7%25 identity in 735 aa overlap). Also similar to TR:O06359 (EMBL:Z95436) hypothetical protein from Mycobacterium tuberculosis (771 aa) fasta scores%3B opt: 2550%2C z-score: 2840.4%2C E(): 0%2C (52.5%25 identity in 774 aa overlap). Contains Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 35.50%2C E-value 1.2e-06.;gbkey=CDS;gene=SCH5.13;product=helicase;protein_id=NP_627748.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3925767	3926012	.	+	.	ID=id4446;Dbxref=GeneID:1098986;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 35.50%2C E-value 1.2e-06.;gbkey=misc_feature;gene=SCH5.13
NC_003888.3	RefSeq	gene	3927094	3927786	.	-	.	ID=gene3576;Dbxref=GeneID:1098987;Name=SCH5.14c;gbkey=Gene;gene=SCH5.14c;gene_biotype=protein_coding;gene_synonym=SCH5.14c;locus_tag=SCO3551
NC_003888.3	RefSeq	CDS	3927094	3927786	.	-	0	ID=cds3506;Parent=gene3576;Dbxref=Genbank:NP_627749.1,GeneID:1098987;Name=NP_627749.1;Note=SCH5.14c%2C possible membrane spanning protein%2C len: 230aa%3B This CDS has been designated based on Hidden-Markoff Model and Frameplot predictions%2C lies in a region of high %25GC DNA and contains a potential membrane spanning hydrophobic region. Glycine rich N-terminal.;gbkey=CDS;gene=SCH5.14c;product=membrane spanning protein;protein_id=NP_627749.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3927540	3927771	.	-	.	ID=id4447;Dbxref=GeneID:1098987;Note=Glycine rich region.;gbkey=repeat_region;gene=SCH5.14c
NC_003888.3	RefSeq	gene	3927783	3928235	.	-	.	ID=gene3577;Dbxref=GeneID:1098988;Name=SCH5.15c;gbkey=Gene;gene=SCH5.15c;gene_biotype=protein_coding;gene_synonym=SCH5.15c;locus_tag=SCO3552
NC_003888.3	RefSeq	CDS	3927783	3928235	.	-	0	ID=cds3507;Parent=gene3577;Dbxref=Genbank:NP_627750.1,GeneID:1098988;Name=NP_627750.1;Note=SCH5.15c%2C membrane protein%2C len: 150 aa%3B similar to TR:O69623 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (125 aa) fasta scores%3B opt: 211%2C z-score: 258.8%2C E(): 4.1e-07%2C (39.6%25 identity in 111 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH5.15c;product=hypothetical protein;protein_id=NP_627750.1;transl_table=11
NC_003888.3	RefSeq	gene	3928243	3928470	.	-	.	ID=gene3578;Dbxref=GeneID:1098989;Name=SCH5.16c;gbkey=Gene;gene=SCH5.16c;gene_biotype=protein_coding;gene_synonym=SCH5.16c;locus_tag=SCO3553
NC_003888.3	RefSeq	CDS	3928243	3928470	.	-	0	ID=cds3508;Parent=gene3578;Dbxref=Genbank:NP_627751.1,GeneID:1098989;Name=NP_627751.1;Note=SCH5.16c%2C small membrane protein%2C len: 75 aa%3B similar to TR:O69624 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (68 aa) fasta scores%3B opt: 129%2C z-score: 191.2%2C E(): 0.0024%2C (40.0%25 identity in 60 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH5.16c;product=small membrane protein;protein_id=NP_627751.1;transl_table=11
NC_003888.3	RefSeq	gene	3928551	3929354	.	-	.	ID=gene3579;Dbxref=GeneID:1098990;Name=SCH5.17c;gbkey=Gene;gene=SCH5.17c;gene_biotype=protein_coding;gene_synonym=SCH5.17c;locus_tag=SCO3554
NC_003888.3	RefSeq	CDS	3928551	3929354	.	-	0	ID=cds3509;Parent=gene3579;Dbxref=Genbank:NP_627752.1,GeneID:1098990;Name=NP_627752.1;Note=SCH5.17c%2C possible integral membrane protein%2C len: 267aa%3B similar to TR:O69625 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (191 aa) fasta scores%3B opt: 324%2C z-score: 329.4%2C E(): 4.9e-11%2C (40.9%25 identity in 154 aa overlap). Contains possible membrane spanning regions.;gbkey=CDS;gene=SCH5.17c;product=hypothetical protein;protein_id=NP_627752.1;transl_table=11
NC_003888.3	RefSeq	gene	3929351	3930316	.	-	.	ID=gene3580;Dbxref=GeneID:1098991;Name=SCH5.18c;gbkey=Gene;gene=SCH5.18c;gene_biotype=protein_coding;gene_synonym=SCH5.18c;locus_tag=SCO3555
NC_003888.3	RefSeq	CDS	3929351	3930316	.	-	0	ID=cds3510;Parent=gene3580;Dbxref=Genbank:NP_627753.1,GeneID:1098991;Name=NP_627753.1;Note=SCH5.18c%2C possible integral membrane protein%2C len: 321 aa%3B similar to TR:O69626 (EMBL:AL022121) hypothetical protein (266 aa) fasta scores%3B opt: 335%2C z-score: 348.0%2C E(): 4.5e-12%2C (38.1%25 identity in 247 aa overlap). Contains probable coiled-coil from 227 to 264 (38 residues)%2C max score: 1.545%2C (probability 0.98).;gbkey=CDS;gene=SCH5.18c;product=hypothetical protein;protein_id=NP_627753.1;transl_table=11
NC_003888.3	RefSeq	gene	3930322	3931893	.	-	.	ID=gene3581;Dbxref=GeneID:1098992;Name=SCH5.19c;gbkey=Gene;gene=SCH5.19c;gene_biotype=protein_coding;gene_synonym=SCH5.19c;locus_tag=SCO3556
NC_003888.3	RefSeq	CDS	3930322	3931893	.	-	0	ID=cds3511;Parent=gene3581;Dbxref=Genbank:NP_627754.1,GeneID:1098992;Name=NP_627754.1;Note=SCH5.19c%2C possible secretory protein%2C len: 523 aa%3B similar to many of undefined function eg. TR:O69627 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (352 aa) fasta scores%3B opt: 1287%2C z-score: 1191.3%2C E(): 0%2C (59.8%25 identity in 351 aa overlap) and SW:TRBB_AGRT6 conjugal transfer protein from Agrobacterium tumefaciens (323 aa) fasta scores%3B opt: 469%2C z-score: 441.4%2C E(): 2.8e-17%2C (31.4%25 identity in 287 aa overlap). Contains Pfam match to entry PF00437 GSPII_E%2C Bacterial type II secretion system protein%2C score 41.30%2C E-value 1.6e-11. Also contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=CDS;gene=SCH5.19c;product=secretory protein;protein_id=NP_627754.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3930709	3930990	.	-	.	ID=id4448;Dbxref=GeneID:1098992;Note=Pfam match to entry PF00437 GSPII_E%2C Bacterial type II secretion system protein%2C score 41.30%2C E-value 1.6e-11;gbkey=misc_feature;gene=SCH5.19c
NC_003888.3	RefSeq	sequence_feature	3930922	3930945	.	-	.	ID=id4449;Dbxref=GeneID:1098992;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCH5.19c
NC_003888.3	RefSeq	sequence_feature	3931036	3931170	.	-	.	ID=id4450;Dbxref=GeneID:1098992;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=SCH5.19c
NC_003888.3	RefSeq	gene	3931899	3933089	.	-	.	ID=gene3582;Dbxref=GeneID:1098993;Name=SCH5.20c;gbkey=Gene;gene=SCH5.20c;gene_biotype=protein_coding;gene_synonym=SCH5.20c;locus_tag=SCO3557
NC_003888.3	RefSeq	CDS	3931899	3933089	.	-	0	ID=cds3512;Parent=gene3582;Dbxref=Genbank:NP_627755.1,GeneID:1098993;Name=NP_627755.1;Note=SCH5.20c%2C possible septum site associated protein%2C len: 396aa%3B similar to many eg. TR:O33612 (EMBL:AB004855) involved in inhibition of morphological differentiation in Streptomyces azureus (260 aa) fasta scores%3B opt: 1510%2C z-score: 1580.5%2C E(): 0%2C (89.1%25 identity in 256 aa overlap) and SW:MIND_BACSU MinD%2C septum site determining protein from Bacillus subtilis (268 aa) fasta scores%3B opt: 177%2C z-score: 193.3%2C E(): 0.0019%2C (22.7%25 identity in 242 aa overlap).;gbkey=CDS;gene=SCH5.20c;product=septum site determining protein;protein_id=NP_627755.1;transl_table=11
NC_003888.3	RefSeq	gene	3933752	3934558	.	+	.	ID=gene3583;Dbxref=GeneID:1098994;Name=SCH5.21;gbkey=Gene;gene=SCH5.21;gene_biotype=protein_coding;gene_synonym=SCH5.21;locus_tag=SCO3558
NC_003888.3	RefSeq	CDS	3933752	3934558	.	+	0	ID=cds3513;Parent=gene3583;Dbxref=Genbank:NP_627756.1,GeneID:1098994;Name=NP_627756.1;Note=SCH5.21%2C probable morphological differentiation-associated protein%2C len: 268 aa%3B almost identical to TR:O33611 (EMBL:AB004855) protein associated with inhibition of morphological differentiation in Streptomyces cyaneus (277 aa) fasta scores%3B opt: 1655%2C z-score: 1949.5%2C E(): 0%2C (93.7%25 identity in 268 aa overlap). Contains possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=SCH5.21;product=morphological differentiation-associated protein;protein_id=NP_627756.1;transl_table=11
NC_003888.3	RefSeq	gene	3934978	3935802	.	-	.	ID=gene3584;Dbxref=GeneID:1098995;Name=SCH5.22c;gbkey=Gene;gene=SCH5.22c;gene_biotype=protein_coding;gene_synonym=SCH5.22c;locus_tag=SCO3559
NC_003888.3	RefSeq	CDS	3934978	3935802	.	-	0	ID=cds3514;Parent=gene3584;Dbxref=Genbank:NP_627757.1,GeneID:1098995;Name=NP_627757.1;Note=SCH5.22c%2C possible oxidoreductase%2C len: 274aa%3B similar to TR:O69630 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (256 aa) fasta scores%3B opt: 289%2C z-score: 335.7%2C E(): 2.1e-11%2C (39.3%25 identity in 270 aa overlap). Also contains a region of similarity to many fatty acid desaturases from plants eg. SW:STAD_RICCO Stearoyl-acyl-carrier-protein desaturase from Ricinus communis (castor bean) (396 aa) fasta scores%3B opt: 112%2C z-score: 133.1%2C E(): 4.1%2C (25.3%25 identity in 146 aa overlap).;gbkey=CDS;gene=SCH5.22c;product=oxidoreductase;protein_id=NP_627757.1;transl_table=11
NC_003888.3	RefSeq	gene	3935905	3936894	.	+	.	ID=gene3585;Dbxref=GeneID:1098996;Name=SCH5.23;gbkey=Gene;gene=SCH5.23;gene_biotype=protein_coding;gene_synonym=SCH5.23;locus_tag=SCO3560
NC_003888.3	RefSeq	CDS	3935905	3936894	.	+	0	ID=cds3515;Parent=gene3585;Dbxref=Genbank:NP_627758.1,GeneID:1098996;Name=NP_627758.1;Note=SCH5.23%2C possible ATP-binding protein%2C len: 329aa%3B Contains PS00017 ATP/GTP-binding site motif A (P-loop). Similar to other proposed ATP-binding proteins of undefined function eg. SW:Y823_METJA hypothetical ATP-binding protein from Methanococcus jannashii (257 aa) fasta scores%3B opt: 237%2C z-score: 279.6%2C E(): 2.9e-08%2C (30.5%25 identity in 256 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCH5.23;product=ATP-binding protein;protein_id=NP_627758.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3935932	3935955	.	+	.	ID=id4451;Dbxref=GeneID:1098996;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCH5.23
NC_003888.3	RefSeq	gene	3936946	3938241	.	-	.	ID=gene3586;Dbxref=GeneID:1098997;Name=SCH5.24c;gbkey=Gene;gene=SCH5.24c;gene_biotype=protein_coding;gene_synonym=SCH5.24c;locus_tag=SCO3561
NC_003888.3	RefSeq	CDS	3936946	3938241	.	-	0	ID=cds3516;Parent=gene3586;Dbxref=Genbank:NP_627759.1,GeneID:1098997;Name=NP_627759.1;Note=SCH5.24c%2C possible lipoprotein%2C len: 431aa%3B Contains possible N-terminal signal sequence and PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCH5.24c;product=hypothetical protein;protein_id=NP_627759.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3938155	3938187	.	-	.	ID=id4452;Dbxref=GeneID:1098997;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCH5.24c
NC_003888.3	RefSeq	gene	3938497	3940989	.	+	.	ID=gene3587;Dbxref=GeneID:1098998;Name=SCH5.25;gbkey=Gene;gene=SCH5.25;gene_biotype=protein_coding;gene_synonym=SCH5.25;locus_tag=SCO3562
NC_003888.3	RefSeq	CDS	3938497	3940989	.	+	0	ID=cds3517;Parent=gene3587;Dbxref=Genbank:NP_627760.1,GeneID:1098998;Name=NP_627760.1;Note=SCH5.25%2C possible integral membrane transport%2C len: 830aa%3B contains possible membrane spanning hydrophobic regions. C-terminal region (600-800aa) similar to carbonic anhydrases eg. SW:CYNT_ECOLI carbonic anhydrase from Escherichia coli fasta scores%3B opt: 342%2C z-score: 333.5%2C E(): 2.9e-11%2C (35.7%25 identity in 210 aa overlap). Also N-terminal half has weak similarity to several proposed sulphate transporters e.g TR:Q55814 (EMBL:D64004) low affinity sulphate transporter from Synechocystis sp. PCC6803 fasta scores%3B opt: 419%2C z-score: 400.7%2C E(): 5.2e-15%2C (30.0%25 identity in 420 aa overlap). Contains Pfam matches to entry PF00484 Pro_CA%2C Prokaryotic-type carbonic anhydrases%2C score 131.20%2C E-value 5.4e-37 and entry PF00916 Sulfate_transp%2C Sulfate transporter family%2C score 119.90%2C E-value 4.9e-32.;gbkey=CDS;gene=SCH5.25;product=integral membrane transport protein;protein_id=NP_627760.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3938866	3939786	.	+	.	ID=id4453;Dbxref=GeneID:1098998;Note=Pfam match to entry PF00916 Sulfate_transp%2C Sulfate transporter family%2C score 119.90%2C E-value 4.9e-32;gbkey=misc_feature;gene=SCH5.25
NC_003888.3	RefSeq	sequence_feature	3940363	3940668	.	+	.	ID=id4454;Dbxref=GeneID:1098998;Note=Pfam match to entry PF00484 Pro_CA%2C Prokaryotic-type carbonic anhydrases%2C score 131.20%2C E-value 5.4e-37;gbkey=misc_feature;gene=SCH5.25
NC_003888.3	RefSeq	gene	3941251	3943206	.	+	.	ID=gene3588;Dbxref=GeneID:1098999;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;gene_synonym=acsA,SCH5.26;locus_tag=SCO3563
NC_003888.3	RefSeq	CDS	3941251	3943206	.	+	0	ID=cds3518;Parent=gene3588;Dbxref=Genbank:NP_627761.1,GeneID:1098999;Name=NP_627761.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;gene=acsA;product=acetyl-CoA synthetase;protein_id=NP_627761.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3941581	3942894	.	+	.	ID=id4455;Dbxref=GeneID:1098999;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 417.30%2C E-value 1.4e-121.;gbkey=misc_feature;gene=acsA
NC_003888.3	RefSeq	sequence_feature	3942031	3942066	.	+	.	ID=id4456;Dbxref=GeneID:1098999;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=acsA
NC_003888.3	RefSeq	gene	3943390	3944814	.	+	.	ID=gene3589;Dbxref=GeneID:1099000;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;gene_synonym=SCH5.27;locus_tag=SCO3564
NC_003888.3	RefSeq	CDS	3943390	3944814	.	+	0	ID=cds3519;Parent=gene3589;Dbxref=Genbank:NP_627762.1,GeneID:1099000;Name=NP_627762.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=pH-dependent sodium/proton antiporter;protein_id=NP_627762.1;transl_table=11
NC_003888.3	RefSeq	gene	3944949	3945437	.	+	.	ID=gene3590;Dbxref=GeneID:1099001;Name=SCH5.28;gbkey=Gene;gene=SCH5.28;gene_biotype=protein_coding;gene_synonym=SCH5.28;locus_tag=SCO3565
NC_003888.3	RefSeq	CDS	3944949	3945437	.	+	0	ID=cds3520;Parent=gene3590;Dbxref=Genbank:NP_627763.1,GeneID:1099001;Name=NP_627763.1;Note=SCH5.28%2C possible integral membrane transport protein%2C len: 162aa%3B similar to TR:O69637 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (172 aa) fasta scores%3B opt: 265%2C z-score: 318.8%2C E(): 1.9e-10%2C (37.4%25 identity in 155 aa overlap). Also limited similarity to TR:O51582 (EMBL:AE001165) proposed sodium/proton antiporter from Borrelia burgdorferi (449 aa) fasta scores%3B opt: 104%2C z-score: 127.7%2C E(): 8.3%2C (32.5%25 identity in 77 aa overlap) and SW:XYLH_HAEIN proposed xylose transport permease from Haemophilus influenzae (375 aa) blast scores (3-109aa) Identities %3D 33/108 (30%25)%2C Positives %3D 53/108 (49%25)%3B (97-127aa) Identities %3D 9/31 (29%25)%2C Positives %3D 18/31 (58%25). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCH5.28;product=integral membrane transport protein;protein_id=NP_627763.1;transl_table=11
NC_003888.3	RefSeq	gene	3945434	3946408	.	+	.	ID=gene3591;Dbxref=GeneID:1099002;Name=SCH5.29;gbkey=Gene;gene=SCH5.29;gene_biotype=protein_coding;gene_synonym=SCH5.29;locus_tag=SCO3566
NC_003888.3	RefSeq	CDS	3945434	3946408	.	+	0	ID=cds3521;Parent=gene3591;Dbxref=Genbank:NP_627764.1,GeneID:1099002;Name=NP_627764.1;Note=SCH5.29%2C possible hydrolase%2C len: 324aa%3B similar to many egs. TR:O69638 (EMBL:AL022121) epoxide hydrolase from Mycobacterium tuberculosis (327 aa) fasta scores%3B opt: 687%2C z-score: 786.1%2C E(): 0%2C (40.7%25 identity in 327 aa overlap) and TR:Q39856 (EMBL:D63781) epoxide hydrolase from Glycine max (soybean) (341 aa) fasta scores%3B opt: 396%2C z-score: 455.4%2C E(): 4.6e-18%2C (29.1%25 identity in 316 aa overlap). Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 68.70%2C E-value 1.3e-16.;gbkey=CDS;gene=SCH5.29;product=hydrolase;protein_id=NP_627764.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3945674	3946384	.	+	.	ID=id4457;Dbxref=GeneID:1099002;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 68.70%2C E-value 1.3e-16.;gbkey=misc_feature;gene=SCH5.29
NC_003888.3	RefSeq	gene	3946803	3948008	.	-	.	ID=gene3592;Dbxref=GeneID:1099003;Name=SCH17.01c;gbkey=Gene;gene=SCH17.01c;gene_biotype=protein_coding;gene_synonym=SCH17.01c,SCH5.30c;locus_tag=SCO3567
NC_003888.3	RefSeq	CDS	3946803	3948008	.	-	0	ID=cds3522;Parent=gene3592;Dbxref=Genbank:NP_733609.1,GeneID:1099003;Name=NP_733609.1;Note=SCH17.01c%2C probable serine protease%2C partial CDS%2C len: >54 aa%3B continues as SCH5.30c in cosmid H5 (EMBL:AL035636). Alternative start codons are present at codons 3 and 8~SCH5.30c%2C partial CDS%2C probable serine protease%2C len: >385aa%3B similar to many eg. TR:O69639 (EMBL:AL022121) proposed serine protease from Mycobacterium tuberculosis (397 aa) fasta scores%3B opt: 835%2C z-score: 938.4%2C E(): 0%2C (39.9%25 identity in 386 aa overlap) and TR:Q44597 (EMBL:U07352) htrA%2C serine protease from Brucella abortus (513 aa) fasta scores%3B opt: 222%2C z-score: 251.4%2C E(): 1.1e-06%2C (30.6%25 identity in 180 aa overlap).;gbkey=CDS;gene=SCH17.01c;product=serine protease;protein_id=NP_733609.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3947845	3947961	.	+	.	ID=id4458;Note=overlap with S.coelicolor cosmid SCH5 from 40428 to 40544;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	3948018	3948021	.	-	.	ID=id4459;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3948054	3948797	.	-	.	ID=gene3593;Dbxref=GeneID:1099004;Name=SCH17.02c;gbkey=Gene;gene=SCH17.02c;gene_biotype=protein_coding;gene_synonym=SCH17.02c;locus_tag=SCO3568
NC_003888.3	RefSeq	CDS	3948054	3948797	.	-	0	ID=cds3523;Parent=gene3593;Dbxref=Genbank:NP_627765.1,GeneID:1099004;Name=NP_627765.1;Note=SCH17.02c%2C conserved hypothetical protein%2C len: 247 aa%3B similar to hypothetical proteins from several organisms e.g. TR:O69640 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical protein (273 aa)%2C fasta scores%3B opt: 524 z-score: 559.0 E(): 8.3e-24%2C 42.6%25 identity in 251 aa overlap. Similar sequences from other organisms e.g. Escherichia coli%2C Klebsiella aerogenes and Schizosaccharomyces pombe%2C have N-termini divergent from this sequence;gbkey=CDS;gene=SCH17.02c;product=hypothetical protein;protein_id=NP_627765.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3948798	3948801	.	-	.	ID=id4460;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3948850	3949602	.	-	.	ID=gene3594;Dbxref=GeneID:1099005;Name=SCH17.03c;gbkey=Gene;gene=SCH17.03c;gene_biotype=protein_coding;gene_synonym=SCH17.03c;locus_tag=SCO3569
NC_003888.3	RefSeq	CDS	3948850	3949602	.	-	0	ID=cds3524;Parent=gene3594;Dbxref=Genbank:NP_627766.1,GeneID:1099005;Name=NP_627766.1;Note=SCH17.03c%2C probable endonuclease%2C len: 250 aa%3B similar to many e.g. SW:UVEN_MICLU (EMBL:U22181)%2C pdg%2C Micrococcus luteus ultraviolet N-glycosylase/AP lyase (279 aa)%2C fasta scores%3B opt: 1012 z-score: 970.1 E(): 0%2C 61.3%25 identity in 261 aa overlap. Weakly similar to SCE94.06%2C mutY (EMBL:AL049628) S.coelicolor adenine glycosylase (308 aa) (30.3%25 identity in 201 aa overlap)%2C differing at C-terminus. Contains Pfam match to entry PF00730 Endonuclease_3%2C Endonuclease III%2C PS01155 Endonuclease III family signature1 and PS00764 Endonuclease III iron-sulfur binding region signature;gbkey=CDS;gene=SCH17.03c;product=endonuclease;protein_id=NP_627766.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3948997	3949521	.	-	.	ID=id4461;Dbxref=GeneID:1099005;Note=Pfam match to entry PF00730 Endonuclease_3%2C Endonuclease III%2C score 272.90%2C E-value 4.2e-78;gbkey=misc_feature;gene=SCH17.03c
NC_003888.3	RefSeq	sequence_feature	3949000	3949050	.	-	.	ID=id4462;Dbxref=GeneID:1099005;Note=PS00764 Endonuclease III iron-sulfur binding region signature;gbkey=misc_feature;gene=SCH17.03c
NC_003888.3	RefSeq	sequence_feature	3949216	3949305	.	-	.	ID=id4463;Dbxref=GeneID:1099005;Note=PS01155 Endonuclease III family signature1;gbkey=misc_feature;gene=SCH17.03c
NC_003888.3	RefSeq	ribosome_entry_site	3949714	3949718	.	+	.	ID=id4464;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3949727	3950062	.	+	.	ID=gene3595;Dbxref=GeneID:1099006;Name=SCH17.04;gbkey=Gene;gene=SCH17.04;gene_biotype=protein_coding;gene_synonym=SCH17.04;locus_tag=SCO3570
NC_003888.3	RefSeq	CDS	3949727	3950062	.	+	0	ID=cds3525;Parent=gene3595;Dbxref=Genbank:NP_627767.1,GeneID:1099006;Name=NP_627767.1;Note=SCH17.04%2C possible membrane protein%2C len: 111 aa%3B unknown function%2C probable highly hydrophobic CDS suggested by positional base preference%2C GC frame analysis and a RBS. Sequence is rich in Ala and Phe and contains 8x degenerate (A/V)V(S/F)FA repeats. Contains TTA (leucine) codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCH17.04;product=hypothetical protein;protein_id=NP_627767.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3949779	3949904	.	+	.	ID=id4465;Dbxref=GeneID:1099006;Note=approx. 8x 15 bp direct repeats;gbkey=repeat_region;gene=SCH17.04
NC_003888.3	RefSeq	sequence_feature	3949934	3949936	.	+	.	ID=id4466;Dbxref=GeneID:1099006;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCH17.04
NC_003888.3	RefSeq	gene	3950326	3951000	.	+	.	ID=gene3596;Dbxref=GeneID:1099007;Name=SCH17.05;gbkey=Gene;gene=SCH17.05;gene_biotype=protein_coding;gene_synonym=SCH17.05;locus_tag=SCO3571
NC_003888.3	RefSeq	CDS	3950326	3951000	.	+	0	ID=cds3526;Parent=gene3596;Dbxref=Genbank:NP_627768.1,GeneID:1099007;Name=NP_627768.1;Note=SCH17.05%2C probable transcriptional regulator%2C len: 224 aa%3B similar to many%2C especially cAMP-binding receptors%2C e.g. TR:O34015 (EMBL:U87623)%2C Crp%2C Vibrio cholerae cyclic AMP receptor protein (210 aa)%2C fasta scores%3B opt: 314 z-score: 381.1 E(): 6.7e-14%2C 30.6%25 identity in 180 aa overlap. Highly similar to TR:O69644 (EMBL:AL022121) Mycobacterium tuberculosis transcriptional regulator (224 aa) (54.5%25 identity in 224 aa overlap). Contains probable helix-turn-helix motif at aa 176-197 (Score 1923%2C +5.74 SD). Contains Pfam matches to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain and to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family;gbkey=CDS;gene=SCH17.05;product=transcriptional regulator;protein_id=NP_627768.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3950347	3950709	.	+	.	ID=id4467;Dbxref=GeneID:1099007;Note=Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain%2C score 43.60%2C E-value 4.4e-09;gbkey=misc_feature;gene=SCH17.05
NC_003888.3	RefSeq	sequence_feature	3950845	3950937	.	+	.	ID=id4468;Dbxref=GeneID:1099007;Note=Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family%2C score 21.60%2C E-value 1.7e-05;gbkey=misc_feature;gene=SCH17.05
NC_003888.3	RefSeq	gene	3951085	3951855	.	-	.	ID=gene3597;Dbxref=GeneID:1099008;Name=SCH17.06c;gbkey=Gene;gene=SCH17.06c;gene_biotype=protein_coding;gene_synonym=SCH17.06c;locus_tag=SCO3572
NC_003888.3	RefSeq	CDS	3951085	3951855	.	-	0	ID=cds3527;Parent=gene3597;Dbxref=Genbank:NP_627769.1,GeneID:1099008;Name=NP_627769.1;Note=SCH17.06c%2C possible hydrolase%2C len: 256 aa%3B weakly similar to eukaryotic glyoxalase e.g. SW:GL2M_ARATH (EMBL:U90928)%2C glx2-1%2C Arabidopsis thaliana hydroxyacylglutathione hydrolase (331 aa)%2C fasta scores%3B opt: 186 z-score: 218.1 E(): 8e-05%2C 29.2%25 identity in 161 aa overlap. Similar to many hypothetical proteins e.g. TR:O69645 (EMBL:AL022121) Mycobacterium tuberculosis hydrolase (264 aa) (54.7%25 identity in 247 aa overlap);gbkey=CDS;gene=SCH17.06c;product=hydrolase;protein_id=NP_627769.1;transl_table=11
NC_003888.3	RefSeq	gene	3951924	3952862	.	-	.	ID=gene3598;Dbxref=GeneID:1099009;Name=SCH17.07c;gbkey=Gene;gene=SCH17.07c;gene_biotype=protein_coding;gene_synonym=SCH17.07c;locus_tag=SCO3573
NC_003888.3	RefSeq	CDS	3951924	3952862	.	-	0	ID=cds3528;Parent=gene3598;Dbxref=Genbank:NP_627770.1,GeneID:1099009;Name=NP_627770.1;Note=SCH17.07c%2C hypothetical protein%2C len: 312 aa%3B unknown function%2C similar to TR:O53287 (EMBL:AL021287) Mycobacterium tuberculosis hypothetical protein (288 aa)%2C fasta scores%3B opt: 648 z-score: 739.5 E(): 0%2C 50.0%25 identity in 260 aa overlap. Weakly similar to TR:O05487 (EMBL:M93187)%2C TnpA%2C Arthrobacter sp. plasmid pASU1 transposase (229 aa) (25.4%25 identity in 256 aa overlap);gbkey=CDS;gene=SCH17.07c;product=hypothetical protein;protein_id=NP_627770.1;transl_table=11
NC_003888.3	RefSeq	gene	3952921	3953985	.	-	.	ID=gene3599;Dbxref=GeneID:1099010;Name=SCH17.08c;gbkey=Gene;gene=SCH17.08c;gene_biotype=protein_coding;gene_synonym=SCH17.08c;locus_tag=SCO3574
NC_003888.3	RefSeq	CDS	3952921	3953985	.	-	0	ID=cds3529;Parent=gene3599;Dbxref=Genbank:NP_627771.1,GeneID:1099010;Name=NP_627771.1;Note=SCH17.08c%2C possible epoxide hydrolase%2C len: 354 aa%3B similar to eukaryotic epoxide hydrolases e.g. TR:Q42566 (EMBL:D16628)%2C atseH%2C Arabidopsis thaliana epoxide hydrolase (321 aa)%2C fasta scores%3B opt: 501 z-score: 542.6 E(): 6.8e-23%2C 37.7%25 identity in 332 aa overlap. Similar to others from S.coelicolor e.g. SCH5.29 (EMBL:AL035636) hydrolase (324 aa) (33.6%25 identity in 348 aa overlap). Alternative start codons are present at codons 6 and 30%2C but these have no apparent RBS. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SCH17.08c;product=epoxide hydrolase;protein_id=NP_627771.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3952939	3953757	.	-	.	ID=id4469;Dbxref=GeneID:1099010;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 77.20%2C E-value 3.5e-19;gbkey=misc_feature;gene=SCH17.08c
NC_003888.3	RefSeq	ribosome_entry_site	3953990	3953995	.	-	.	ID=id4470;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3954219	3954686	.	-	.	ID=gene3600;Dbxref=GeneID:1099011;Name=SCH17.09c;gbkey=Gene;gene=SCH17.09c;gene_biotype=protein_coding;gene_synonym=SCH17.09c;locus_tag=SCO3575
NC_003888.3	RefSeq	CDS	3954219	3954686	.	-	0	ID=cds3530;Parent=gene3600;Dbxref=Genbank:NP_627772.1,GeneID:1099011;Name=NP_627772.1;Note=SCH17.09c%2C conserved hypothetical protein%2C len: 155 aa%3B unknown function%2C similar to pB5 (EMBL:U67906) Trypanosoma cruzi protein only expressed in the epimastigote form of the parasite (160 aa)%2C fasta scores%3B opt: 384 z-score: 444.0 E(): 2.1e-17%2C 47.4%25 identity in 152 aa overlap. Also similar to TR:O69646 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical protein (151 aa) (68.0%25 identity in 150 aa overlap);gbkey=CDS;gene=SCH17.09c;product=hypothetical protein;protein_id=NP_627772.1;transl_table=11
NC_003888.3	RefSeq	gene	3954683	3954844	.	-	.	ID=gene3601;Dbxref=GeneID:1099012;Name=SCH17.10c;gbkey=Gene;gene=SCH17.10c;gene_biotype=protein_coding;gene_synonym=SCH17.10c;locus_tag=SCO3576
NC_003888.3	RefSeq	CDS	3954683	3954844	.	-	0	ID=cds3531;Parent=gene3601;Dbxref=Genbank:NP_627773.1,GeneID:1099012;Name=NP_627773.1;Note=SCH17.10c%2C hypothetical protein%2C len: 53 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCH17.10c;product=hypothetical protein;protein_id=NP_627773.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3954857	3954937	.	+	.	ID=id4471;Note=3x degenerate approx. 26 bp direct repeats;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3954997	3955974	.	+	.	ID=gene3602;Dbxref=GeneID:1099013;Name=SCH17.11;gbkey=Gene;gene=SCH17.11;gene_biotype=protein_coding;gene_synonym=SCH17.11;locus_tag=SCO3577
NC_003888.3	RefSeq	CDS	3954997	3955974	.	+	0	ID=cds3532;Parent=gene3602;Dbxref=Genbank:NP_627774.1,GeneID:1099013;Name=NP_627774.1;Note=SCH17.11%2C possible ion-transporting ATPase%2C len: 325 aa%3B similar to N-terminus of TR:O50593 (EMBL:AB004659)%2C arsA%2C ATPase subunit of Acidiphilium multivorum arsenite transport protein (583 aa)%2C fasta scores%3B opt: 204 z-score: 231.6 E(): 1.4e-05%2C 25.8%25 identity in 325 aa overlap. Also similar to TR:O69647 (EMBL:AL022121) Mycobacterium tuberculosis  anion transporting ATPase (340 aa) (52.1%25 identity in 328 aa overlap). Part of the N-terminus is weakly similar to the adjacent CDS SCH17.12 (481 aa) (25.9%25 identity in 158 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCH17.11;product=ion-transporting ATPase;protein_id=NP_627774.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3955021	3955044	.	+	.	ID=id4472;Dbxref=GeneID:1099013;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH17.11
NC_003888.3	RefSeq	gene	3955971	3957416	.	+	.	ID=gene3603;Dbxref=GeneID:1099014;Name=SCH17.12;gbkey=Gene;gene=SCH17.12;gene_biotype=protein_coding;gene_synonym=SCH17.12;locus_tag=SCO3578
NC_003888.3	RefSeq	CDS	3955971	3957416	.	+	0	ID=cds3533;Parent=gene3603;Dbxref=Genbank:NP_627775.1,GeneID:1099014;Name=NP_627775.1;Note=SCH17.12%2C possible ion-transporting ATPase%2C len: 481 aa%3B similar to many arsenite-translocating ATPases and very weakly to TR:O54984 (EMBL:AF039405)%2C arsA%2C Mus musculus arsenite-translocating ATPase (350 aa)%2C fasta scores%3B opt: 192 z-score: 201.5 E(): 0.00068%2C 21.9%25 identity in 302 aa overlap. Similar to TR:O69648 (EMBL:AL022121) Mycobacterium tuberculosis anion transporting ATPase (386 aa) (51.2%25 identity in 441 aa overlap). Part of the N-terminus is weakly similar to the adjacent CDS SCH17.11 (325 aa) (25.9%25 identity in 158 aa overlap). Contains 3x degenerate PARHQKGX repeats near N-terminus and 3x degenerate SPEASDT repeats near the C-terminus. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCH17.12;product=ion-transporting ATPase;protein_id=NP_627775.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3955986	3956057	.	+	.	ID=id4473;Dbxref=GeneID:1099014;Note=3x degenerate approx. 24 bp direct repeats;gbkey=repeat_region;gene=SCH17.12
NC_003888.3	RefSeq	sequence_feature	3956136	3956159	.	+	.	ID=id4474;Dbxref=GeneID:1099014;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH17.12
NC_003888.3	RefSeq	repeat_region	3957105	3957182	.	+	.	ID=id4475;Dbxref=GeneID:1099014;Note=3x degenerate approx. 26 bp direct repeats;gbkey=repeat_region;gene=SCH17.12
NC_003888.3	RefSeq	gene	3957444	3957782	.	-	.	ID=gene3604;Dbxref=GeneID:1099015;Name=SCH17.13c;gbkey=Gene;gene=SCH17.13c;gene_biotype=protein_coding;gene_synonym=SCH17.13c;locus_tag=SCO3579
NC_003888.3	RefSeq	CDS	3957444	3957782	.	-	0	ID=cds3534;Parent=gene3604;Dbxref=Genbank:NP_627776.1,GeneID:1099015;Name=NP_627776.1;Note=SCH17.13c%2C probable transcriptional regulator%2C len: 112 aa%3B similar to many transcriptional regulators from Streptomyces e.g. TR:Q53963 (EMBL:X62287)%2C WhiB%2C S.coelicolor transcriptional regulator essential for sporulation (87 aa)%2C fasta scores%3B opt: 230 z-score: 307.8 E(): 8.1e-10%2C 50.0%25 identity in 64 aa overlap. Highest similarity is to TR:O69649 (EMBL:AL022121) Mycobacterium tuberculosis regulatory protein (100 aa) (67.9%25 identity in 78 aa overlap);gbkey=CDS;gene=SCH17.13c;product=regulatory protein;protein_id=NP_627776.1;transl_table=11
NC_003888.3	RefSeq	gene	3958243	3960513	.	+	.	ID=gene3605;Dbxref=GeneID:1099016;Name=SCH17.14;gbkey=Gene;gene=SCH17.14;gene_biotype=protein_coding;gene_synonym=SCH17.14,SCH66.01;locus_tag=SCO3580
NC_003888.3	RefSeq	CDS	3958243	3960513	.	+	0	ID=cds3535;Parent=gene3605;Dbxref=Genbank:NP_733610.1,GeneID:1099016;Name=NP_733610.1;Note=SCH66.01%2C partial CDS%2C possible transpeptidase%2C len: >366 aa%3B similar to the C-terminal region of many penicillin-binding transpeptidases eg. SW:PBPD_BACSU penicillin-binding protein 4 from Bacillus subtilis (624 aa) fasta scores%3B opt: 298%2C z-score: 300.3%2C E(): 2.1e-09%2C (32.0%25 identity in 228 aa overlap). Contains Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 3.70%2C E-value 1.6e-08.~SCH17.14%2C probable penicillin-binding protein%2C partial CDS%2C len: >427 aa%3B similar to many e.g. TR:P72351 (EMBL:S82044)%2C Pon1%2C Mycobacterium leprae penicillin-binding protein (821 aa)%2C fasta scores%3B opt: 735 z-score: 808.8 E(): 0%2C 36.8%25 identity in 413 aa overlap. Similar to others from S. coelicolor e.g. SCH24.23 (EMBL:AL049826) probable penicillin-binding protein (795 aa) (28.8%25 identity in 420 aa overlap). Contains hydrophobic%2C possible membrane-spanning region in the N-terminus. Contains Pfam match to entry PF00912 Transglycosyl%2C Transglycosylase;gbkey=CDS;gene=SCH17.14;product=transpeptidase;protein_id=NP_733610.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3958444	3958986	.	+	.	ID=id4476;Dbxref=GeneID:1099016;Note=Pfam match to entry PF00912 Transglycosyl%2C Transglycosylase%2C score 272.40%2C E-value 5.7e-78;gbkey=misc_feature;gene=SCH17.14
NC_003888.3	RefSeq	sequence_feature	3959413	3960246	.	+	.	ID=id4477;Dbxref=GeneID:1099016;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 3.70%2C E-value 1.6e-08.;gbkey=misc_feature;gene=SCH17.14
NC_003888.3	RefSeq	stem_loop	3960525	3960572	.	+	.	ID=id4478;Note=Imperfect inverted repeat (20/22) 4 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3960641	3961105	.	-	.	ID=gene3606;Dbxref=GeneID:1099017;Name=SCH66.02c;gbkey=Gene;gene=SCH66.02c;gene_biotype=protein_coding;gene_synonym=SCH66.02c;locus_tag=SCO3581
NC_003888.3	RefSeq	CDS	3960641	3961105	.	-	0	ID=cds3536;Parent=gene3606;Dbxref=Genbank:NP_627777.1,GeneID:1099017;Name=NP_627777.1;Note=SCH66.02c%2C unknown%2C len: 154aa%3B similar to many eg. TR:O69656 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (154 aa) fasta scores%3B opt: 425%2C z-score: 453.4%2C E(): 6.2e-18%2C (46.1%25 identity in 154 aa overlap).;gbkey=CDS;gene=SCH66.02c;product=hypothetical protein;protein_id=NP_627777.1;transl_table=11
NC_003888.3	RefSeq	gene	3961226	3962155	.	+	.	ID=gene3607;Dbxref=GeneID:1099018;Name=SCH66.03;gbkey=Gene;gene=SCH66.03;gene_biotype=protein_coding;gene_synonym=SCH66.03;locus_tag=SCO3582
NC_003888.3	RefSeq	CDS	3961226	3962155	.	+	0	ID=cds3537;Parent=gene3607;Dbxref=Genbank:NP_627778.1,GeneID:1099018;Name=NP_627778.1;Note=SCH66.03%2C hypothetical protein%2C len: 309 aa%3B similar to many e.g. TR:O69651 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (319 aa) fasta scores%3B opt: 610%2C z-score: 716.1%2C E(): 1.5e-32%2C (51.5%25 identity in 307 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH66.03;product=hypothetical protein;protein_id=NP_627778.1;transl_table=11
NC_003888.3	RefSeq	gene	3962279	3963043	.	+	.	ID=gene3608;Dbxref=GeneID:1099019;Name=SCH66.04;gbkey=Gene;gene=SCH66.04;gene_biotype=protein_coding;gene_synonym=SCH66.04;locus_tag=SCO3583
NC_003888.3	RefSeq	CDS	3962279	3963043	.	+	0	ID=cds3538;Parent=gene3608;Dbxref=Genbank:NP_627779.1,GeneID:1099019;Name=NP_627779.1;Note=SCH66.04%2C possible integral membrane regulator%2C len: 254 aa%3B C-terminal region highly similar to TR:Q54389 (EMBL:M27108) ORFA located alongside the pSAM2 attachment site in Streptomyces lividans (100 aa) fasta scores%3B opt: 621%2C z-score: 728.0%2C E(): 0%2C (95.0%25 identity in 100 aa overlap). N-terminal region similar to SW:CARR_MYXXA CarR%2C light-induced regulator of carotenogenesis in Myxococcus xanthus (221 aa) fasta scores%3B opt: 120%2C z-score: 148.1%2C E(): 0.63%2C (31.1%25 identity in 167 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCH66.04;product=integral membrane regulator;protein_id=NP_627779.1;transl_table=11
NC_003888.3	RefSeq	gene	3963111	3963184	.	+	.	ID=gene3609;Dbxref=GeneID:3240032;Name=SCOt29;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt29
NC_003888.3	RefSeq	tRNA	3963111	3963184	.	+	.	ID=rna42;Parent=gene3609;Dbxref=GeneID:3240032;Note=tRNA Pro anticodon CGG%2C Cove score 80.14;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	exon	3963111	3963184	.	+	.	ID=id4479;Parent=rna42;Dbxref=GeneID:3240032;Note=tRNA Pro anticodon CGG%2C Cove score 80.14;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	sequence_feature	3963139	3963251	.	+	.	ID=id4480;Note=Blast match to SASAM2C M22965 S.ambofaciens integrated element pSAM2%2C attachment region attR DNA.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	3963217	3963576	.	-	.	ID=gene3610;Dbxref=GeneID:1099020;Name=SCH66.05c;gbkey=Gene;gene=SCH66.05c;gene_biotype=protein_coding;gene_synonym=SCH66.05c;locus_tag=SCO3584
NC_003888.3	RefSeq	CDS	3963217	3963576	.	-	0	ID=cds3539;Parent=gene3610;Dbxref=Genbank:NP_627780.1,GeneID:1099020;Name=NP_627780.1;Note=SCH66.05c%2C unknown%2C len: 119 aa%3B some similarity to TR:O86817 (EMBL:AL031031) very hypothetical protein from Streptomyces coelicolor (88 aa) fasta scores%3B opt: 96%2C z-score: 132.6%2C E(): 4.6%2C (48.4%25 identity in 62 aa overlap).;gbkey=CDS;gene=SCH66.05c;product=hypothetical protein;protein_id=NP_627780.1;transl_table=11
NC_003888.3	RefSeq	gene	3963717	3964058	.	+	.	ID=gene3611;Dbxref=GeneID:1099021;Name=SCH66.06;gbkey=Gene;gene=SCH66.06;gene_biotype=protein_coding;gene_synonym=SCH66.06;locus_tag=SCO3585
NC_003888.3	RefSeq	CDS	3963717	3964058	.	+	0	ID=cds3540;Parent=gene3611;Dbxref=Genbank:NP_627781.1,GeneID:1099021;Name=NP_627781.1;Note=SCH66.06%2C unknown%2C len: 113aa;gbkey=CDS;gene=SCH66.06;product=hypothetical protein;protein_id=NP_627781.1;transl_table=11
NC_003888.3	RefSeq	gene	3964141	3965133	.	-	.	ID=gene3612;Dbxref=GeneID:1099022;Name=SCH66.07c;gbkey=Gene;gene=SCH66.07c;gene_biotype=protein_coding;gene_synonym=SCH66.07c;locus_tag=SCO3586
NC_003888.3	RefSeq	CDS	3964141	3965133	.	-	0	ID=cds3541;Parent=gene3612;Dbxref=Genbank:NP_627782.1,GeneID:1099022;Name=NP_627782.1;Note=SCH66.07c%2C possible integral membrane protein%2C len: 330aa%3B contains a possible membrane spanning hydrophobic region;gbkey=CDS;gene=SCH66.07c;product=hypothetical protein;protein_id=NP_627782.1;transl_table=11
NC_003888.3	RefSeq	gene	3965144	3965737	.	-	.	ID=gene3613;Dbxref=GeneID:1099023;Name=SCH66.08c;gbkey=Gene;gene=SCH66.08c;gene_biotype=protein_coding;gene_synonym=SCH66.08c;locus_tag=SCO3587
NC_003888.3	RefSeq	CDS	3965144	3965737	.	-	0	ID=cds3542;Parent=gene3613;Dbxref=Genbank:NP_627783.1,GeneID:1099023;Name=NP_627783.1;Note=SCH66.08c%2C possible regulatory protein%2C len: 197 aa%3B similar to many e.g. TR:CAB37593 (EMBL:AL035569) transcriptional regulator from Streptomyces coelicolor (196 aa) fasta scores%3B opt: 386%2C z-score: 483.1%2C E(): 1.4e-19%2C (35.5%25 identity in 169 aa overlap) and SW:MTRR_NEIGO MtrR regulatory protein from Neisseria gonorrhoeae (210 aa) fasta scores%3B opt: 109%2C z-score: 143.8%2C E(): 1.1%2C (23.3%25 identity in 176 aa overlap). Contains possible helix-turn-helix (+2.97 SD) 26-47 aa.;gbkey=CDS;gene=SCH66.08c;product=regulatory protein;protein_id=NP_627783.1;transl_table=11
NC_003888.3	RefSeq	gene	3965649	3966812	.	+	.	ID=gene3614;Dbxref=GeneID:1099024;Name=SCH66.09;gbkey=Gene;gene=SCH66.09;gene_biotype=protein_coding;gene_synonym=SCH66.09;locus_tag=SCO3588
NC_003888.3	RefSeq	CDS	3965649	3966812	.	+	0	ID=cds3543;Parent=gene3614;Dbxref=Genbank:NP_627784.1,GeneID:1099024;Name=NP_627784.1;Note=SCH66.09%2C unknown%2C len: 387 aa%3B similar to TR:O32505 (EMBL:AB003475) hypothetical protein from Deinococcus radiodurans (383 aa) fasta scores%3B opt: 157%2C z-score: 184.7%2C E(): 0.0058%2C (27.1%25 identity in 225 aa overlap).;gbkey=CDS;gene=SCH66.09;product=hypothetical protein;protein_id=NP_627784.1;transl_table=11
NC_003888.3	RefSeq	gene	3966835	3967929	.	-	.	ID=gene3615;Dbxref=GeneID:1099025;Name=SCH66.10c;gbkey=Gene;gene=SCH66.10c;gene_biotype=protein_coding;gene_synonym=SCH66.10c;locus_tag=SCO3589
NC_003888.3	RefSeq	CDS	3966835	3967929	.	-	0	ID=cds3544;Parent=gene3615;Dbxref=Genbank:NP_627785.1,GeneID:1099025;Name=NP_627785.1;Note=SCH66.10c%2C probable two component sensor kinase%2C len: 364 aa%3B similar to many e.g. SW:CUTS_STRCO two component sensor kinase involved in the regulation of copper uptake in Streptomyces coelicolor (414 aa) fasta scores%3B opt: 659%2C z-score: 768.1%2C E(): 0%2C (35.6%25 identity in 390 aa overlap). Contains Pfam matches to entry PF00512 signal%2C Signal carboxyl-terminal domain and to entry PF00672 DUF5%2C Domain found in bacterial signal proteins. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH66.10c;product=two component sensor kinase;protein_id=NP_627785.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3966862	3967482	.	-	.	ID=id4481;Dbxref=GeneID:1099025;Note=Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 105.30%2C E-value 1.2e-27.;gbkey=misc_feature;gene=SCH66.10c
NC_003888.3	RefSeq	sequence_feature	3967522	3967734	.	-	.	ID=id4482;Dbxref=GeneID:1099025;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 65.20%2C E-value 1.4e-15.;gbkey=misc_feature;gene=SCH66.10c
NC_003888.3	RefSeq	gene	3967922	3968617	.	-	.	ID=gene3616;Dbxref=GeneID:1099026;Name=SC66T3.01c;gbkey=Gene;gene=SC66T3.01c;gene_biotype=protein_coding;gene_synonym=SC66T3.01c,SCH66.11c;locus_tag=SCO3590
NC_003888.3	RefSeq	CDS	3967922	3968617	.	-	0	ID=cds3545;Parent=gene3616;Dbxref=Genbank:NP_733611.1,GeneID:1099026;Name=NP_733611.1;Note=SC66T3.01c%2C probable two-component system response regulator%2C partial CDS%2C len: >62 aa%3B similar to many e.g. SW:CUTR_STRCO (EMBL:X58793)%2C CutR%2C S.coelicolor two component response regulator involved in regulation of copper metabolism (217 aa)%2C fasta scores%3B opt: 231 z-score: 316.5 E(): 2.7e-10%2C 56.5%25 identity in 62 aa overlap. The CDS continues as SCH66.11c in cosmid H66 (EMBL:AL049731)~SCH66.11c%2C probable two component response regulator%2C len: 213 aa%3B similar to many e.g. SW:CUTR_STRCO two component response regulator involved in regulation of copper uptake in Streptomyces coelicolor (217 aa) fasta scores%3B opt: 751%2C z-score: 874.8%2C E(): 0%2C (57.8%25 identity in 199 aa overlap). Contains Pfam matches to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal and to entry PF00072 response_reg%2C Response regulator receiver domain.;gbkey=CDS;gene=SC66T3.01c;product=two-component system response regulator;protein_id=NP_733611.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3967976	3968182	.	-	.	ID=id4483;Dbxref=GeneID:1099026;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 51.60%2C E-value 4.9e-14.;gbkey=misc_feature;gene=SC66T3.01c
NC_003888.3	RefSeq	sequence_feature	3968282	3968509	.	-	.	ID=id4484;Dbxref=GeneID:1099026;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 7.20%2C E-value 0.00058.;gbkey=misc_feature;gene=SC66T3.01c
NC_003888.3	RefSeq	gene	3968694	3968819	.	-	.	ID=gene3617;Dbxref=GeneID:1099027;Name=SC66T3.02c;gbkey=Gene;gene=SC66T3.02c;gene_biotype=protein_coding;gene_synonym=SC66T3.02c;locus_tag=SCO3591
NC_003888.3	RefSeq	CDS	3968694	3968819	.	-	0	ID=cds3546;Parent=gene3617;Dbxref=Genbank:NP_627786.1,GeneID:1099027;Name=NP_627786.1;Note=SC66T3.02c%2C small membrane protein%2C len: 41 aa%3B unknown function%2C improbable CDS suggested by GC frame plot%2C amino acid composition and possible RBS. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC66T3.02c;product=small membrane protein;protein_id=NP_627786.1;transl_table=11
NC_003888.3	RefSeq	gene	3968822	3969814	.	+	.	ID=gene3618;Dbxref=GeneID:1099028;Name=SC66T3.03;gbkey=Gene;gene=SC66T3.03;gene_biotype=protein_coding;gene_synonym=SC66T3.03;locus_tag=SCO3592
NC_003888.3	RefSeq	CDS	3968822	3969814	.	+	0	ID=cds3547;Parent=gene3618;Dbxref=Genbank:NP_627787.1,GeneID:1099028;Name=NP_627787.1;Note=SC66T3.03%2C possible membrane protein%2C len: 330 aa%3B similar to TR:Q9L038 (EMBL:AL352956) Streptomyces coelicolor  membrane protein SC1H10.06c%2C 301 aa%3B fasta scores: opt: 557 Z-score: 630.1 E(): 1.8e-27%3B 50.968%25 identity in 310 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions at the N-terminus region;gbkey=CDS;gene=SC66T3.03;product=hypothetical protein;protein_id=NP_627787.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3969846	3969936	.	+	.	ID=id4485;Note=degenerate repeats of G{1%2C2}C{1%2C3};gbkey=repeat_region
NC_003888.3	RefSeq	gene	3970005	3971198	.	+	.	ID=gene3619;Dbxref=GeneID:1099029;Name=SC66T3.04;gbkey=Gene;gene=SC66T3.04;gene_biotype=protein_coding;gene_synonym=SC66T3.04;locus_tag=SCO3593
NC_003888.3	RefSeq	CDS	3970005	3971198	.	+	0	ID=cds3548;Parent=gene3619;Dbxref=Genbank:NP_627788.1,GeneID:1099029;Name=NP_627788.1;Note=SC66T3.04%2C hypothetical protein%2C len: 397 aa%3B unknown function%2C weakly similar to many femA proteins e.g. SW:FEMA_STAAU (EMBL:M23918)%2C FemA%2C Staphylococcus aureus factor essential for expression of methicillin resistance (433 aa)%2C fasta scores%3B opt: 184 z-score: 218.4 E(): 7.7e-05%2C 23.3%25 identity in 434 aa overlap. Similar to SCH24.26c (EMBL:AL049826) S.coelicolor hypothetical protein (373 aa) (50.4%25 identity in 387 aa overlap);gbkey=CDS;gene=SC66T3.04;product=hypothetical protein;protein_id=NP_627788.1;transl_table=11
NC_003888.3	RefSeq	gene	3971293	3972306	.	+	.	ID=gene3620;Dbxref=GeneID:1099030;Name=dldh;gbkey=Gene;gene=dldh;gene_biotype=protein_coding;gene_synonym=dldh,SC66T3.05;locus_tag=SCO3594
NC_003888.3	RefSeq	CDS	3971293	3972306	.	+	0	ID=cds3549;Parent=gene3620;Dbxref=Genbank:NP_627789.1,GeneID:1099030;Name=NP_627789.1;Note=SC66T3.05%2C dldh%2C probable D-lactate dehydrogenase%2C len: 337 aa%3B highly similar to many e.g. TR:O33805 (EMBL:U8296) Streptomyces toyocaensis D-lactate dehydrogenase (330 aa)%2C fasta scores%3B opt: 1470 z-score: 1711.8 E(): 0%2C71.4%25 identity in 318 aa overlap. Also similar to D-specific alpha-keto acid dehydrogenases from vancomycin-resistant bacteria e.g. SW:VANH_ENTFC (EMBL:M64304)%2C VanH%2C Enterococcus faecium alpha-keto acid dehydrogenase (322 aa) (61.4%25 identity in 316 aa overlap). Similar to other S.coelicolor dehydrogenases e.g. part of SerA (EMBL:AL035569) S.coelicolor probable D-3-phosphoglycerate dehydrogenase (529 aa) (32.2%25 identity in 255 aa overlap). Contains Pfam matches to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2 and PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3;gbkey=CDS;gene=dldh;product=D-lactate dehydrogenase;protein_id=NP_627789.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3971578	3972213	.	+	.	ID=id4486;Dbxref=GeneID:1099030;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 318.60%2C E-value 3.7e-130;gbkey=misc_feature;gene=dldh
NC_003888.3	RefSeq	sequence_feature	3971908	3971976	.	+	.	ID=id4487;Dbxref=GeneID:1099030;Note=PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2;gbkey=misc_feature;gene=dldh
NC_003888.3	RefSeq	sequence_feature	3971995	3972045	.	+	.	ID=id4488;Dbxref=GeneID:1099030;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3;gbkey=misc_feature;gene=dldh
NC_003888.3	RefSeq	gene	3972317	3973357	.	+	.	ID=gene3621;Dbxref=GeneID:1099031;Name=vanB;gbkey=Gene;gene=vanB;gene_biotype=protein_coding;gene_synonym=ddlA2,SC66T3.06;locus_tag=SCO3595
NC_003888.3	RefSeq	CDS	3972317	3973357	.	+	0	ID=cds3550;Parent=gene3621;Dbxref=Genbank:NP_627790.1,GeneID:1099031;Name=NP_627790.1;Note=vancomycin B-type resistance protein%3B catalyzes the formation of D-alanyl-D-lactate in peptidoglycan synthesis;gbkey=CDS;gene=vanB;product=D-alanine--D-lactate ligase;protein_id=NP_627790.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3973163	3973249	.	+	.	ID=id4489;Dbxref=GeneID:1099031;Note=PS00844 D-alanine--D-alanine ligase signature 2;gbkey=misc_feature;gene=vanB
NC_003888.3	RefSeq	gene	3973354	3973962	.	+	.	ID=gene3622;Dbxref=GeneID:1099032;Name=SC66T3.07;gbkey=Gene;gene=SC66T3.07;gene_biotype=protein_coding;gene_synonym=SC66T3.07;locus_tag=SCO3596
NC_003888.3	RefSeq	CDS	3973354	3973962	.	+	0	ID=cds3551;Parent=gene3622;Dbxref=Genbank:NP_627791.1,GeneID:1099032;Name=NP_627791.1;Note=SC66T3.07%2C probable D-alanine:D-alanine dipeptidase%2C len: 202 aa%3B highly similar to e.g. vanXst (EMBL:AF039028) Streptomyces toyocaensis D-ala-D-ala dipeptidase (208 aa)%2C fasta scores%3B opt: 1137 z-score: 1354.4 E(): 0%2C 77.6%25 identity in 201 aa overlap. Also similar to e.g. SW:VANX_ENTF (EMBL:U35369)%2C vanXB%2C Enterococcus faecalis D-alanyl-D-alanine dipeptidase (202 aa) (63.9%25 identity in 202 aa overlap);gbkey=CDS;gene=SC66T3.07;product=D-alanine:D-alanine dipeptidase;protein_id=NP_627791.1;transl_table=11
NC_003888.3	RefSeq	gene	3974012	3974824	.	-	.	ID=gene3623;Dbxref=GeneID:1099033;Name=SC66T3.08c;gbkey=Gene;gene=SC66T3.08c;gene_biotype=protein_coding;gene_synonym=SC66T3.08c;locus_tag=SCO3597
NC_003888.3	RefSeq	CDS	3974012	3974824	.	-	0	ID=cds3552;Parent=gene3623;Dbxref=Genbank:NP_627792.1,GeneID:1099033;Name=NP_627792.1;Note=SC66T3.08c%2C conserved hypothetical protein%2C len: 270 aa%3B unknown function%2C similar to hypothetical proteins from Mycobacterium tuberculosis%2C Mycobacterium leprae and Bacillus subtilis e.g. SW:Y03O_MYCTU (EMBL:Z75555) Mycobacterium tuberculosis hypothetical protein (273 aa)%2C fasta scores%3B opt: 413 z-score: 428.5 E(): 1.5e-16%2C 31.7%25 identity in 268 aa overlap. Contains poly-glycine tract at N-terminus which is absent in the similar sequences;gbkey=CDS;gene=SC66T3.08c;product=hypothetical protein;protein_id=NP_627792.1;transl_table=11
NC_003888.3	RefSeq	gene	3974836	3975600	.	-	.	ID=gene3624;Dbxref=GeneID:1099034;Name=SC66T3.09c;gbkey=Gene;gene=SC66T3.09c;gene_biotype=protein_coding;gene_synonym=SC66T3.09c;locus_tag=SCO3598
NC_003888.3	RefSeq	CDS	3974836	3975600	.	-	0	ID=cds3553;Parent=gene3624;Dbxref=Genbank:NP_627793.1,GeneID:1099034;Name=NP_627793.1;Note=SC66T3.09c%2C possible membrane protein%2C len: 254 aa%3B unknown function%2C similar to TR:O26720 (EMBL:AE000843) Methanobacterium thermoautotrophicum hypothetical protein%2C fasta scores%3B opt: 319 z-score: 383.6 E(): 4.9e-14%2C 28.7%25 identity in 251 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC66T3.09c;product=hypothetical protein;protein_id=NP_627793.1;transl_table=11
NC_003888.3	RefSeq	gene	3975852	3976808	.	-	.	ID=gene3625;Dbxref=GeneID:1099035;Name=SC66T3.10c;gbkey=Gene;gene=SC66T3.10c;gene_biotype=protein_coding;gene_synonym=SC66T3.10c;locus_tag=SCO3599
NC_003888.3	RefSeq	CDS	3975852	3976808	.	-	0	ID=cds3554;Parent=gene3625;Dbxref=Genbank:NP_627794.1,GeneID:1099035;Name=NP_627794.1;Note=SC66T3.10c%2C hypothetical protein%2C len: 318 aa%3B unknown function%2C similar to hypothetical proteins e.g. TR:O54025 (EMBL:AJ000884)%2C ORF2%2C Paracoccus denitrificans hypothetical protein (281 aa)%2C fasta scores%3B opt: 244 z-score: 272.8 E(): 7.2e-08%2C 31.5%25 identity in 295 aa overlap;gbkey=CDS;gene=SC66T3.10c;product=hypothetical protein;protein_id=NP_627794.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3976816	3976819	.	-	.	ID=id4490;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3976909	3977412	.	+	.	ID=gene3626;Dbxref=GeneID:1099036;Name=SC66T3.11;gbkey=Gene;gene=SC66T3.11;gene_biotype=protein_coding;gene_synonym=SC66T3.11;locus_tag=SCO3600
NC_003888.3	RefSeq	CDS	3976909	3977412	.	+	0	ID=cds3555;Parent=gene3626;Dbxref=Genbank:NP_627795.1,GeneID:1099036;Name=NP_627795.1;Note=SC66T3.11%2C hypothetical protein%2C len: 167 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. The start codon is uncertain%3B two possible starts codons are present 12 and 15 codons upstream;gbkey=CDS;gene=SC66T3.11;product=hypothetical protein;protein_id=NP_627795.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3977519	3977523	.	+	.	ID=id4491;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3977529	3978014	.	+	.	ID=gene3627;Dbxref=GeneID:1099037;Name=SC66T3.12;gbkey=Gene;gene=SC66T3.12;gene_biotype=protein_coding;gene_synonym=SC66T3.12;locus_tag=SCO3601
NC_003888.3	RefSeq	CDS	3977529	3978014	.	+	0	ID=cds3556;Parent=gene3627;Dbxref=Genbank:NP_627796.1,GeneID:1099037;Name=NP_627796.1;Note=SC66T3.12%2C conserved hypothetical protein%2C len: 161 aa%3B unknown function%2C similar to hypothetical proteins from several organisms%2C often adjacent to a ion transport protein e.g. TR:O05882 (EMBL:Z95121) Mycobacterium tuberculosis hypothetical protein (160 aa)%2C fasta scores%3B opt: 348 z-score: 435.7 E(): 6.1e-17%2C 44.1%25 identity in 152 aa overlap. Similar to TR:O69959 (EMBL:AL022268) S.coelicolor hypothetical protein (161 aa) (68.9%25 identity in 161 aa overlap)%2C which is also adjacent to a possible ion transport protein;gbkey=CDS;gene=SC66T3.12;product=hypothetical protein;protein_id=NP_627796.1;transl_table=11
NC_003888.3	RefSeq	gene	3978061	3979272	.	-	.	ID=gene3628;Dbxref=GeneID:1099038;Name=SC66T3.13c;gbkey=Gene;gene=SC66T3.13c;gene_biotype=protein_coding;gene_synonym=SC66T3.13c;locus_tag=SCO3602
NC_003888.3	RefSeq	CDS	3978061	3979272	.	-	0	ID=cds3557;Parent=gene3628;Dbxref=Genbank:NP_627797.1,GeneID:1099038;Name=NP_627797.1;Note=SC66T3.13c%2C probable transmembrane transport protein%2C len: 403 aa%3B similar to many ion transport proteins and to part of SW:KEFC_ECOLI (EMBL:X56742)%2C kefC%2C Escherichia coli glutathione-regulated potassium-efflux system protein (620 aa)%2C fasta scores%3B opt: 328 z-score: 319.2 E(): 1.9e-10%2C 27.1%25 identity in 410 aa overlap. Similar to TR:O69958 (EMBL:AL022268) S.coelicolor transmembrane transport protein (411 aa) (74.9%25 identity in 399 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC66T3.13c;product=transmembrane transport protein;protein_id=NP_627797.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3979283	3979287	.	-	.	ID=id4492;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3979806	3981350	.	-	.	ID=gene3629;Dbxref=GeneID:1099039;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=cvrA,nhaP2,ycgO;locus_tag=SCO3603
NC_003888.3	RefSeq	CDS	3979806	3981350	.	-	0	ID=cds3558;Parent=gene3629;Dbxref=Genbank:NP_627798.1,GeneID:1099039;Name=NP_627798.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=potassium/proton antiporter;protein_id=NP_627798.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3980181	3981332	.	-	.	ID=id4493;Dbxref=GeneID:1099039;Note=Pfam match to entry PF00999 Na_H_Exchanger%2C Sodium/hydrogen exchanger family%2C score 99.60%2C E-value 6.3e-26;gbkey=misc_feature;gene=cvrA
NC_003888.3	RefSeq	ribosome_entry_site	3981359	3981362	.	-	.	ID=id4494;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	repeat_region	3981366	3981544	.	-	.	ID=id4495;Note=repeat region 2%3B 7x 25 bp direct repeats;gbkey=repeat_region
NC_003888.3	RefSeq	stem_loop	3981506	3981600	.	+	.	ID=id4496;Note=stem is 30/40 (75%25) matches%2C 0 gaps%3B loop is 15 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	3981549	3981839	.	-	.	ID=gene3630;Dbxref=GeneID:1099040;Name=SC66T3.15c;gbkey=Gene;gene=SC66T3.15c;gene_biotype=protein_coding;gene_synonym=SC66T3.15c;locus_tag=SCO3604
NC_003888.3	RefSeq	CDS	3981549	3981839	.	-	0	ID=cds3559;Parent=gene3630;Dbxref=Genbank:NP_627799.1,GeneID:1099040;Name=NP_627799.1;Note=SC66T3.15c%2C possible membrane protein%2C len: 96 aa%3B unknown function%2C N-terminus similar to TR:O53503 (EMBL:L021957) Mycobacterium tuberculosis hypothetical protein (134 aa)%2C fasta scores%3B opt: 134 z-score: 179.9 E(): 0.011%2C 34.7%25 identity in 101 aa overlap and TR:O69562 (EMBL:AL022602) Mycobacterium leprae hypothetical protein (134 aa) (38.3%25 identity in 60 aa overlap). Contains central hydrophobic region while the remainder is hydrophilic;gbkey=CDS;gene=SC66T3.15c;product=hypothetical protein;protein_id=NP_627799.1;transl_table=11
NC_003888.3	RefSeq	gene	3982106	3982402	.	+	.	ID=gene3631;Dbxref=GeneID:1099041;Name=SC66T3.16;gbkey=Gene;gene=SC66T3.16;gene_biotype=protein_coding;gene_synonym=SC66T3.16;locus_tag=SCO3605
NC_003888.3	RefSeq	CDS	3982106	3982402	.	+	0	ID=cds3560;Parent=gene3631;Dbxref=Genbank:NP_627800.1,GeneID:1099041;Name=NP_627800.1;Note=SC66T3.16%2C hypothetical protein%2C len: 98 aa%3B unknown function%2C probable CDS suggested by positional base preference and GC frame analysis. C-terminus is Asn-rich and contains 2x QQPY repeats;gbkey=CDS;gene=SC66T3.16;product=hypothetical protein;protein_id=NP_627800.1;transl_table=11
NC_003888.3	RefSeq	gene	3982525	3983607	.	+	.	ID=gene3632;Dbxref=GeneID:1099042;Name=SC66T3.17;gbkey=Gene;gene=SC66T3.17;gene_biotype=protein_coding;gene_synonym=SC66T3.17;locus_tag=SCO3606
NC_003888.3	RefSeq	CDS	3982525	3983607	.	+	0	ID=cds3561;Parent=gene3632;Dbxref=Genbank:NP_627801.1,GeneID:1099042;Name=NP_627801.1;Note=SC66T3.17%2C possible regulator%2C len: 360 aa%3B similar to the C-terminal region of TR:Q00509 (EMBL:X63451)%2C SrmR%2C Streptomyces ambofaciens polyketide synthase regulatory gene (604 aa)%2C fasta scores%3B opt: 248 z-score: 291.7 E(): 6.4e-09%2C 25.3%25 identity in 372 aa overlap. Also similar to the C-terminal region of Mycobacteria e.g. TR:O69477 (EMBL:AL023635) Mycobacterium leprae hypothetical protein (414 aa) (26.0%25 identity in 277 aa overlap). Weakly similar to the C-terminal region of SC8D9.30c (EMBL:AL035569) S.coelicolor possible transcriptional regulator (415 aa) (26.7%25 identity in 303 aa overlap). Contains probable helix-turn-helix motif at aa 237-258 (score 1012%2C +2.63 SD);gbkey=CDS;gene=SC66T3.17;product=regulator;protein_id=NP_627801.1;transl_table=11
NC_003888.3	RefSeq	gene	3983677	3985146	.	-	.	ID=gene3633;Dbxref=GeneID:1099043;Name=SC66T3.18c;gbkey=Gene;gene=SC66T3.18c;gene_biotype=protein_coding;gene_synonym=SC66T3.18c;locus_tag=SCO3607
NC_003888.3	RefSeq	CDS	3983677	3985146	.	-	0	ID=cds3562;Parent=gene3633;Dbxref=Genbank:NP_627802.1,GeneID:1099043;Name=NP_627802.1;Note=SC66T3.18c%2C possible hypothetical protein%2C len: 489 aa%3B unknown function%2C similar to SW:YUAG_BACSU (EMBL:Z99119) Bacillus subtilis hypothetical protein (509 aa)%2C fasta scores%3B opt: 618 z-score: 592.7 E(): 1.1e-25%2C 36.8%25 identity in 503 aa overlap. Also similar to many eukaryotic flotillins (epidermal surface antigens) e.g. TR:O75955 (EMBL:AF089750) Homo sapiens flotillin-1 (427 aa) (34.8%25 identity in 442 aa overlap). N-terminus is hydrophobic and may contitute a membrane anchor. Contains probable coiled-coil from 205 to 258 (54 residues) (Max score: 1.522%2C probability 0.97) and possible N-terminal region signal sequence peptide;gbkey=CDS;gene=SC66T3.18c;product=hypothetical protein;protein_id=NP_627802.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3985083	3985115	.	+	.	ID=id4497;Note=degenerate 33 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3985241	3985750	.	-	.	ID=gene3634;Dbxref=GeneID:1099044;Name=SC66T3.19c;gbkey=Gene;gene=SC66T3.19c;gene_biotype=protein_coding;gene_synonym=SC66T3.19c;locus_tag=SCO3608
NC_003888.3	RefSeq	CDS	3985241	3985750	.	-	0	ID=cds3563;Parent=gene3634;Dbxref=Genbank:NP_627803.1,GeneID:1099044;Name=NP_627803.1;Note=SC66T3.19c%2C hypothetical protein%2C len: 169 aa%3B unknown function%2C weakly similar to TR:O32077 (EMBL:Z99119)%2C YuaF%2C Bacillus subtilis hypothetical protein (174 aa)%2C fasta scores%3B opt: 142 z-score: 164.3 E(): 0.08%2C 28.0%25 identity in 161 aa overlap. Contains 5x (V/L)(F/L)(D/E)G repeats near the N-terminus;gbkey=CDS;gene=SC66T3.19c;product=hypothetical protein;protein_id=NP_627803.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3985763	3985767	.	-	.	ID=id4498;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3985984	3987855	.	+	.	ID=gene3635;Dbxref=GeneID:1099045;Name=SC66T3.20;gbkey=Gene;gene=SC66T3.20;gene_biotype=protein_coding;gene_synonym=SC66T3.20;locus_tag=SCO3609
NC_003888.3	RefSeq	CDS	3985984	3987855	.	+	0	ID=cds3564;Parent=gene3635;Dbxref=Genbank:NP_627804.1,GeneID:1099045;Name=NP_627804.1;Note=SC66T3.20%2C possible membrane protein%2C len: 623 aa%3B unknown function%2C C-terminus shares weak similarity with other hypothetical membrane proteins e.g. TR:P74405 (EMBL:D90914) Synechocystis sp. hypothetical protein (568 aa)%2C fasta scores%3B opt: 250 z-score: 272.0 E(): 8e-08%2C 24.3%25 identity in 576 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC66T3.20;product=hypothetical protein;protein_id=NP_627804.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3987008	3987040	.	-	.	ID=id4499;Note=degenerate 33 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	3988036	3989856	.	-	.	ID=gene3636;Dbxref=GeneID:1099046;Name=SC66T3.21c;gbkey=Gene;gene=SC66T3.21c;gene_biotype=protein_coding;gene_synonym=SC66T3.21c;locus_tag=SCO3610
NC_003888.3	RefSeq	CDS	3988036	3989856	.	-	0	ID=cds3565;Parent=gene3636;Dbxref=Genbank:NP_627805.1,GeneID:1099046;Name=NP_627805.1;Note=SC66T3.21c%2C probable peptide hydrolase%2C len: 606 aa%3B similar to many peptidases e.g. (EMBL:AB01029) Sphingomonas capsulata prolyl oligopeptidase (723 aa)%2C fasta scores%3B opt: 333 z-score: 359.1 E(): 1.1e-12%2C 25.8%25 identity in 620 aa overlap (dissimilar at N-terminus). Also weakly similar to eukaryotic peptidases e.g. TR:P70479 (EMBL:X14915) Rattus norvegicus acyl-peptide hydrolase (729 aa) (26.6%25 identity in 395 aa overlap). Contains Pfam match to entry PF00326 Prolyl_oligopep%2C Prolyl oligopeptidase family;gbkey=CDS;gene=SC66T3.21c;product=peptide hydrolase;protein_id=NP_627805.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3988444	3988677	.	-	.	ID=id4500;Dbxref=GeneID:1099046;Note=Pfam match to entry PF00326 Prolyl_oligopep%2C Prolyl oligopeptidase family%2C score 34.00%2C E-value 3.4e-09;gbkey=misc_feature;gene=SC66T3.21c
NC_003888.3	RefSeq	gene	3989980	3990816	.	+	.	ID=gene3637;Dbxref=GeneID:1099047;Name=SC66T3.22;gbkey=Gene;gene=SC66T3.22;gene_biotype=protein_coding;gene_synonym=SC66T3.22;locus_tag=SCO3611
NC_003888.3	RefSeq	CDS	3989980	3990816	.	+	0	ID=cds3566;Parent=gene3637;Dbxref=Genbank:NP_627806.1,GeneID:1099047;Name=NP_627806.1;Note=SC66T3.22%2C membrane protein%2C len: 278 aa%3B unknown function%2C weakly similar to SW:Y01G_MYCTU (EMBL:Z70692) Mycobacterium tuberculosis hypothetical protein (271 aa)%2C fasta scores%3B opt: 218 z-score: 233.1 E(): 1.2e-05%2C 26.8%25 identity in 254 aa overlap. Has a hydrophobic region at the N-terminus;gbkey=CDS;gene=SC66T3.22;product=hypothetical protein;protein_id=NP_627806.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3990186	3990225	.	+	.	ID=id4501;Dbxref=GeneID:1099047;Note=degenerate 40 bp inverted repeat;gbkey=repeat_region;gene=SC66T3.22
NC_003888.3	RefSeq	gene	3990912	3992276	.	-	.	ID=gene3638;Dbxref=GeneID:1099048;Name=SC66T3.23c;gbkey=Gene;gene=SC66T3.23c;gene_biotype=protein_coding;gene_synonym=SC66T3.23c;locus_tag=SCO3612
NC_003888.3	RefSeq	CDS	3990912	3992276	.	-	0	ID=cds3567;Parent=gene3638;Dbxref=Genbank:NP_627807.1,GeneID:1099048;Name=NP_627807.1;Note=SC66T3.23c%2C possible membrane protein%2C len: 454 aa%3B unknown function%2C the N-terminal third of the protein is hydrophilic%2C followed by a hydrophobic%2C possible membrane-spanning region. The N-terminus also contains 7x slightly degenerate HD(P/A)G(S/P/A)(D/G)ARDG repeats;gbkey=CDS;gene=SC66T3.23c;product=hypothetical protein;protein_id=NP_627807.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3991626	3991665	.	-	.	ID=id4502;Dbxref=GeneID:1099048;Note=degenerate 40 bp inverted repeat;gbkey=repeat_region;gene=SC66T3.23c
NC_003888.3	RefSeq	repeat_region	3992064	3992264	.	-	.	ID=id4503;Dbxref=GeneID:1099048;Note=repeat region 3%3B 7x 30 bp direct repeats;gbkey=repeat_region;gene=SC66T3.23c
NC_003888.3	RefSeq	gene	3992273	3992845	.	-	.	ID=gene3639;Dbxref=GeneID:1099049;Name=SC66T3.24c;gbkey=Gene;gene=SC66T3.24c;gene_biotype=protein_coding;gene_synonym=SC66T3.24c;locus_tag=SCO3613
NC_003888.3	RefSeq	CDS	3992273	3992845	.	-	0	ID=cds3568;Parent=gene3639;Dbxref=Genbank:NP_627808.1,GeneID:1099049;Name=NP_627808.1;Note=SC66T3.24c%2C possible RNA polymerase sigma factor%2C len: 190 aa%3B weakly similar to many e.g. SW:RPOE_STRCO (EMBL:L29636)%2C AigE%2C S.coelicolor RNA polymerase sigma-E factor (176 aa)%2C fasta scores%3B opt: 236 z-score: 274.0 E(): 6.1e-08%2C 30.9%25 identity in 162 aa overlap. The start site is uncertain as there is a second possible start site at codon 7;gbkey=CDS;gene=SC66T3.24c;product=RNA polymerase sigma factor;protein_id=NP_627808.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3992284	3992288	.	-	.	ID=id4504;Dbxref=GeneID:1099049;Note=possible RBS;gbkey=RBS;gene=SC66T3.24c
NC_003888.3	RefSeq	gene	3993330	3994418	.	-	.	ID=gene3640;Dbxref=GeneID:1099050;Name=asd2;gbkey=Gene;gene=asd2;gene_biotype=protein_coding;gene_synonym=asd2,SC66T3.25c;locus_tag=SCO3614
NC_003888.3	RefSeq	CDS	3993330	3994418	.	-	0	ID=cds3569;Parent=gene3640;Dbxref=Genbank:NP_627809.1,GeneID:1099050;Name=NP_627809.1;Note=SC66T3.25c%2C asd2%2C probable aspartate-semialdehyde dehydrogenase%2C len: 362 aa%3B highly similar to many e.g. SW:DHAS_CORFL (EMBL:L16848)%2C Asd%2C Corynebacterium flavum aspartate-semialdehyde dehydrogenase (344 aa)%2C fasta scores%3B opt: 1018 z-score: 1179.9 E(): 0%2C 50.9%25 identity in 348 aa overlap. The start site is uncertain as the GC frame plot suggests that the start may be at codon 22. Contains Pfam match to entry PF01118 Semialdhyde_dh%2C Semialdehyde dehydrogenase;gbkey=CDS;gene=asd2;product=aspartate-semialdehyde dehydrogenase;protein_id=NP_627809.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3993342	3994370	.	-	.	ID=id4505;Dbxref=GeneID:1099050;Note=Pfam match to entry PF01118 Semialdhyde_dh%2C Semialdehyde dehydrogenase%2C score 406.70%2C E-value 2.1e-118;gbkey=misc_feature;gene=asd2
NC_003888.3	RefSeq	gene	3994418	3995695	.	-	.	ID=gene3641;Dbxref=GeneID:1099051;Name=ask;gbkey=Gene;gene=ask;gene_biotype=protein_coding;gene_synonym=ask,SC66T3.26c;locus_tag=SCO3615
NC_003888.3	RefSeq	CDS	3994418	3995695	.	-	0	ID=cds3570;Parent=gene3641;Dbxref=Genbank:NP_627810.1,GeneID:1099051;Name=NP_627810.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%2C in Bacillus%2C lysine sensitive%3B regulated by response to starvation.;gbkey=CDS;gene=ask;product=aspartate kinase;protein_id=NP_627810.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	3994802	3995491	.	-	.	ID=id4506;Dbxref=GeneID:1099051;Note=Pfam match to entry PF00696 aakinase%2C Aspartate kinases%2C Glutamate kinases and Gamma glutamate phospho-reductases%2C score 160.20%2C E-value 3.5e-44;gbkey=misc_feature;gene=ask
NC_003888.3	RefSeq	sequence_feature	3995657	3995683	.	-	.	ID=id4507;Dbxref=GeneID:1099051;Note=PS00324 Aspartokinase signature;gbkey=misc_feature;gene=ask
NC_003888.3	RefSeq	ribosome_entry_site	3995701	3995704	.	-	.	ID=id4508;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3995973	3996191	.	+	.	ID=gene3642;Dbxref=GeneID:1099052;Name=SC66T3.27;gbkey=Gene;gene=SC66T3.27;gene_biotype=protein_coding;gene_synonym=SC66T3.27;locus_tag=SCO3616
NC_003888.3	RefSeq	CDS	3995973	3996191	.	+	0	ID=cds3571;Parent=gene3642;Dbxref=Genbank:NP_627811.1,GeneID:1099052;Name=NP_627811.1;Note=SC66T3.27%2C hypothetical protein%2C len: 72 aa%3B unknown function%2C possible CDS suggested by positional base preference and GC frame analysis;gbkey=CDS;gene=SC66T3.27;product=hypothetical protein;protein_id=NP_627811.1;transl_table=11
NC_003888.3	RefSeq	gene	3996276	3996935	.	-	.	ID=gene3643;Dbxref=GeneID:1099053;Name=SC66T3.28c;gbkey=Gene;gene=SC66T3.28c;gene_biotype=protein_coding;gene_synonym=SC66T3.28c;locus_tag=SCO3617
NC_003888.3	RefSeq	CDS	3996276	3996935	.	-	0	ID=cds3572;Parent=gene3643;Dbxref=Genbank:NP_627812.1,GeneID:1099053;Name=NP_627812.1;Note=SC66T3.28c%2C hypothetical protein%2C len: 219 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SC66T3.28c;product=hypothetical protein;protein_id=NP_627812.1;transl_table=11
NC_003888.3	RefSeq	gene	3996928	3997527	.	-	.	ID=gene3644;Dbxref=GeneID:1099054;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;gene_synonym=SC66T3.29c;locus_tag=SCO3618
NC_003888.3	RefSeq	CDS	3996928	3997527	.	-	0	ID=cds3573;Parent=gene3644;Dbxref=Genbank:NP_627813.1,GeneID:1099054;Name=NP_627813.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=NP_627813.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3996947	3996950	.	-	.	ID=id4509;Dbxref=GeneID:1099054;Note=possible RBS;gbkey=RBS;gene=recR
NC_003888.3	RefSeq	ribosome_entry_site	3997538	3997541	.	-	.	ID=id4510;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3997626	3997973	.	-	.	ID=gene3645;Dbxref=GeneID:1099055;Name=SC66T3.30c;gbkey=Gene;gene=SC66T3.30c;gene_biotype=protein_coding;gene_synonym=SC66T3.30c;locus_tag=SCO3619
NC_003888.3	RefSeq	CDS	3997626	3997973	.	-	0	ID=cds3574;Parent=gene3645;Dbxref=Genbank:NP_627814.1,GeneID:1099055;Name=NP_627814.1;Note=SC66T3.30c%2C hypothetical protein%2C len: 115 aa%3B unknown function%2C similar to other hypothetical proteins with Asn-rich N-termini found in the recR regions of some organisms (e.g. Bacillus subtilis%2C Mycobacterium leprae%2C Mycobacterium tuberculosis%2C Escherichia coli) e.g. TR:O69683 (EMBL:AL022121) Mycobacterium tuberculosis hypothetical protein (113 aa)%2C fasta scores%3B opt: 375 z-score: 409.0 E(): 1.9e-15%2C 50.8%25 identity in 120 aa overlap. Contains probable coiled-coils from 9 to 41 (33 residues) (Max score: 1.832%2C probability 1.00) and from 68 to 96 (29 residues) (Max score: 1.491%2C probability 0.94);gbkey=CDS;gene=SC66T3.30c;product=hypothetical protein;protein_id=NP_627814.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	3998245	3998248	.	+	.	ID=id4511;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	3998255	3999019	.	+	.	ID=gene3646;Dbxref=GeneID:1099056;Name=SC66T3.31;gbkey=Gene;gene=SC66T3.31;gene_biotype=protein_coding;gene_synonym=SC66T3.31;locus_tag=SCO3620
NC_003888.3	RefSeq	CDS	3998255	3999019	.	+	0	ID=cds3575;Parent=gene3646;Dbxref=Genbank:NP_627815.1,GeneID:1099056;Name=NP_627815.1;Note=SC66T3.31%2C possible membrane protein%2C len: 254 aa%3B unknown function%2C contains hyrophobic%2C possible membrane-spanning region;gbkey=CDS;gene=SC66T3.31;product=hypothetical protein;protein_id=NP_627815.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3998757	3998800	.	+	.	ID=id4512;Dbxref=GeneID:1099056;Note=degenerate 44 bp inverted repeat;gbkey=repeat_region;gene=SC66T3.31
NC_003888.3	RefSeq	gene	3999086	4001437	.	-	.	ID=gene3647;Dbxref=GeneID:1099057;Name=SC66T3.32c;gbkey=Gene;gene=SC66T3.32c;gene_biotype=protein_coding;gene_synonym=SC66T3.32c;locus_tag=SCO3621
NC_003888.3	RefSeq	CDS	3999086	4001437	.	-	0	ID=cds3576;Parent=gene3647;Dbxref=Genbank:NP_627816.1,GeneID:1099057;Name=NP_627816.1;Note=SC66T3.32c%2C probable serine-threonine protein kinase%2C len: 783 aa%3B N-terminal half similar to the corresponding region of several serine-threonine protein kinases e.g. SW:AFSK_STRCO (EMBL:D15062)%2C afsK%2C S.coelicolor serine-threonine protein kinase (799 aa)%2C fasta scores%3B opt: 944 z-score: 519.3 E(): 1.3e-21%2C 45.6%25 identity in 379 aa overlap. The central region contains 26x slightly degenerate GG(A/V)G(P/S) repeats. Contains two Pfam matches to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C PS00108 Ser/Thr protein kinases active-site signature and PS00107 Protein kinases ATP-binding region signature and possible hydrophobic membrane spanning region at the C-terminal domain;gbkey=CDS;gene=SC66T3.32c;product=serine-threonine protein kinase;protein_id=NP_627816.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	3999976	4000376	.	-	.	ID=id4513;Dbxref=GeneID:1099057;Note=repeat region 4%3B 26x 15 bp direct repeats;gbkey=repeat_region;gene=SC66T3.32c
NC_003888.3	RefSeq	repeat_region	4000279	4000322	.	-	.	ID=id4514;Dbxref=GeneID:1099057;Note=degenerate 44 bp inverted repeat;gbkey=repeat_region;gene=SC66T3.32c
NC_003888.3	RefSeq	sequence_feature	4000604	4001095	.	-	.	ID=id4515;Dbxref=GeneID:1099057;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 104.00%2C E-value 8.9e-28;gbkey=misc_feature;gene=SC66T3.32c
NC_003888.3	RefSeq	sequence_feature	4000970	4001008	.	-	.	ID=id4516;Dbxref=GeneID:1099057;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SC66T3.32c
NC_003888.3	RefSeq	sequence_feature	4001237	4001365	.	-	.	ID=id4517;Dbxref=GeneID:1099057;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 27.80%2C E-value 1.3e-06;gbkey=misc_feature;gene=SC66T3.32c
NC_003888.3	RefSeq	sequence_feature	4001279	4001347	.	-	.	ID=id4518;Dbxref=GeneID:1099057;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SC66T3.32c
NC_003888.3	RefSeq	gene	4001665	4003020	.	+	.	ID=gene3648;Dbxref=GeneID:1099058;Name=SC66T3.33;gbkey=Gene;gene=SC66T3.33;gene_biotype=protein_coding;gene_synonym=SC66T3.33;locus_tag=SCO3622
NC_003888.3	RefSeq	CDS	4001665	4003020	.	+	0	ID=cds3577;Parent=gene3648;Dbxref=Genbank:NP_627817.1,GeneID:1099058;Name=NP_627817.1;Note=SC66T3.33%2C probable aminotransferase%2C len: 451 aa%3B similar to many e.g. SW:GABT_ECOLI (EMBL:M88334)%2C gabT%2C Escherichia coli 4-aminobutyrate aminotransferase (426 aa)%2C fasta scores%3B opt: 706 z-score: 815.4 E(): 0%2C 32.3%25 identity in 427 aa overlap. Also similar to TR:O86744 (EMBL:AL031035) S.coelicolor probable aminotransferase (457 aa) (37.3%25 identity in 362 aa overlap). Contains Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate and PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=CDS;gene=SC66T3.33;product=hypothetical protein;protein_id=NP_627817.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4001785	4002801	.	+	.	ID=id4519;Dbxref=GeneID:1099058;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 366.60%2C E-value 5.7e-127;gbkey=misc_feature;gene=SC66T3.33
NC_003888.3	RefSeq	sequence_feature	4002406	4002519	.	+	.	ID=id4520;Dbxref=GeneID:1099058;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SC66T3.33
NC_003888.3	RefSeq	gene	4003147	4003848	.	+	.	ID=gene3649;Dbxref=GeneID:1099059;Name=SC66T3.34;gbkey=Gene;gene=SC66T3.34;gene_biotype=protein_coding;gene_synonym=SC66T3.34,SCH10.01;locus_tag=SCO3623
NC_003888.3	RefSeq	CDS	4003147	4003848	.	+	0	ID=cds3578;Parent=gene3649;Dbxref=Genbank:NP_733612.1,GeneID:1099059;Name=NP_733612.1;Note=SCH10.01%2C hypothetical protein%2C partial CDS%2C len: >119 aa%3B probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition~SC66T3.34%2C probable gntR-family transcriptional regulator%2C partial CDS%2C len: >128 aa%3B similar to many e.g. (EMBL:U91412)%2C luxZ%2C Photobacterium leiognathi lux operon enhancer (221 aa)%2C fasta scores%3B opt: 197 z-score: 240.2 E(): 4.7e-06%2C 32.2%25 identity in 87 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SC66T3.34;product=transcriptional regulator;protein_id=NP_733612.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4003201	4003377	.	+	.	ID=id4521;Dbxref=GeneID:1099059;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 53.30%2C E-value 6.5e-15;gbkey=misc_feature;gene=SC66T3.34
NC_003888.3	RefSeq	sequence_feature	4003489	4003532	.	+	.	ID=id4522;Dbxref=GeneID:1099059;Note=overlap with S.coelicolor cosmid St66T3 from 35058 35101;gbkey=misc_feature;gene=SC66T3.34
NC_003888.3	RefSeq	sequence_feature	4003489	4003532	.	-	.	ID=id4523;Note=overlap with S.coelicolor cosmid StH10;gbkey=misc_feature;partial=true;start_range=.,4003489
NC_003888.3	RefSeq	gene	4003950	4004615	.	+	.	ID=gene3650;Dbxref=GeneID:1099060;Name=SCH10.02;gbkey=Gene;gene=SCH10.02;gene_biotype=protein_coding;gene_synonym=SCH10.02;locus_tag=SCO3624
NC_003888.3	RefSeq	CDS	4003950	4004615	.	+	0	ID=cds3579;Parent=gene3650;Dbxref=Genbank:NP_627818.1,GeneID:1099060;Name=NP_627818.1;Note=SCH10.02%2C hypothetical protein%2C len: 221 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCH10.02;product=hypothetical protein;protein_id=NP_627818.1;transl_table=11
NC_003888.3	RefSeq	gene	4004631	4004921	.	-	.	ID=gene3651;Dbxref=GeneID:1099061;Name=SCH10.03c;gbkey=Gene;gene=SCH10.03c;gene_biotype=protein_coding;gene_synonym=SCH10.03c;locus_tag=SCO3625
NC_003888.3	RefSeq	CDS	4004631	4004921	.	-	0	ID=cds3580;Parent=gene3651;Dbxref=Genbank:NP_627819.1,GeneID:1099061;Name=NP_627819.1;Note=SCH10.03c%2C hypothetical protein%2C len: 96 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCH10.03c;product=hypothetical protein;protein_id=NP_627819.1;transl_table=11
NC_003888.3	RefSeq	gene	4004960	4005844	.	-	.	ID=gene3652;Dbxref=GeneID:1099062;Name=SCH10.04c;gbkey=Gene;gene=SCH10.04c;gene_biotype=protein_coding;gene_synonym=SCH10.04c;locus_tag=SCO3626
NC_003888.3	RefSeq	CDS	4004960	4005844	.	-	0	ID=cds3581;Parent=gene3652;Dbxref=Genbank:NP_627820.1,GeneID:1099062;Name=NP_627820.1;Note=SCH10.04c%2C probable RNA polymerase sigma factor%2C len: 294 aa%3B similar to many e.g. TR:O05735 (EMBL:U87308) SigE%2C Mycobacterium avium extracytoplasmic function alternative sigma factor (251 aa)%2C fasta scores%3B opt: 226 z-score: 266.2 E(): 1.6e-07%2C 29.8%25 identity in 168 aa overlap;gbkey=CDS;gene=SCH10.04c;product=RNA polymerase sigma factor;protein_id=NP_627820.1;transl_table=11
NC_003888.3	RefSeq	gene	4005960	4006160	.	-	.	ID=gene3653;Dbxref=GeneID:1099063;Name=SCH10.05c;gbkey=Gene;gene=SCH10.05c;gene_biotype=protein_coding;gene_synonym=SCH10.05c;locus_tag=SCO3627
NC_003888.3	RefSeq	CDS	4005960	4006160	.	-	0	ID=cds3582;Parent=gene3653;Dbxref=Genbank:NP_627821.1,GeneID:1099063;Name=NP_627821.1;Note=SCH10.05c%2C hypothetical protein%2C len: 66 aa%3B unknown function%2C probable CDS suggested by positional base preference and GC frame analysis;gbkey=CDS;gene=SCH10.05c;product=hypothetical protein;protein_id=NP_627821.1;transl_table=11
NC_003888.3	RefSeq	gene	4006237	4006728	.	-	.	ID=gene3654;Dbxref=GeneID:1099064;Name=SCH10.06c;gbkey=Gene;gene=SCH10.06c;gene_biotype=protein_coding;gene_synonym=SCH10.06c;locus_tag=SCO3628
NC_003888.3	RefSeq	CDS	4006237	4006728	.	-	0	ID=cds3583;Parent=gene3654;Dbxref=Genbank:NP_627822.1,GeneID:1099064;Name=NP_627822.1;Note=SCH10.06c%2C hypothetical protein%2C len: 163 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH10.06c;product=hypothetical protein;protein_id=NP_627822.1;transl_table=11
NC_003888.3	RefSeq	gene	4006900	4008183	.	-	.	ID=gene3655;Dbxref=GeneID:1099065;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;gene_synonym=purA,SCH10.07c;locus_tag=SCO3629
NC_003888.3	RefSeq	CDS	4006900	4008183	.	-	0	ID=cds3584;Parent=gene3655;Dbxref=Genbank:NP_627823.1,GeneID:1099065;Name=NP_627823.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;gene=purA;product=adenylosuccinate synthetase;protein_id=NP_627823.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4007008	4008171	.	-	.	ID=id4524;Dbxref=GeneID:1099065;Note=Pfam match to entry PF00709 Adenylsucc_synt%2C Adenylosuccinate synthetase%2C score 742.40%2C E-value 1.9e-219;gbkey=misc_feature;gene=purA
NC_003888.3	RefSeq	sequence_feature	4007440	4007472	.	-	.	ID=id4525;Dbxref=GeneID:1099065;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=purA
NC_003888.3	RefSeq	sequence_feature	4007758	4007793	.	-	.	ID=id4526;Dbxref=GeneID:1099065;Note=PS00513 Adenylosuccinate synthetase active site;gbkey=misc_feature;gene=purA
NC_003888.3	RefSeq	ribosome_entry_site	4008356	4008359	.	+	.	ID=id4527;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4008369	4009274	.	+	.	ID=gene3656;Dbxref=GeneID:1099066;Name=SCH10.08;gbkey=Gene;gene=SCH10.08;gene_biotype=protein_coding;gene_synonym=SCH10.08;locus_tag=SCO3630
NC_003888.3	RefSeq	CDS	4008369	4009274	.	+	0	ID=cds3585;Parent=gene3656;Dbxref=Genbank:NP_627824.1,GeneID:1099066;Name=NP_627824.1;Note=SCH10.08%2C hypothetical protein%2C len: 301 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains a hydrophobic%2C possible membrane-spanning region;gbkey=CDS;gene=SCH10.08;product=hypothetical protein;protein_id=NP_627824.1;transl_table=11
NC_003888.3	RefSeq	gene	4009271	4009780	.	+	.	ID=gene3657;Dbxref=GeneID:1099067;Name=SCH10.09;gbkey=Gene;gene=SCH10.09;gene_biotype=protein_coding;gene_synonym=SCH10.09;locus_tag=SCO3631
NC_003888.3	RefSeq	CDS	4009271	4009780	.	+	0	ID=cds3586;Parent=gene3657;Dbxref=Genbank:NP_627825.1,GeneID:1099067;Name=NP_627825.1;Note=SCH10.09%2C hypothetical protein%2C len: 169 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCH10.09;product=hypothetical protein;protein_id=NP_627825.1;transl_table=11
NC_003888.3	RefSeq	gene	4009793	4010251	.	-	.	ID=gene3658;Dbxref=GeneID:1099068;Name=SCH10.10c;gbkey=Gene;gene=SCH10.10c;gene_biotype=protein_coding;gene_synonym=SCH10.10c;locus_tag=SCO3632
NC_003888.3	RefSeq	CDS	4009793	4010251	.	-	0	ID=cds3587;Parent=gene3658;Dbxref=Genbank:NP_627826.1,GeneID:1099068;Name=NP_627826.1;Note=SCH10.10c%2C hypothetical protein%2C len: 152 aa%3B unknown function%2C weakly similar to TR:O53786 (EMBL:AL021943) Mycobacterium tuberculosis hypothetical protein (165 aa)%2C fasta scores%3B opt: 151 z-score: 200.3 E(): 0.00078%2C 22.5%25 identity in 142 aa overlap. Contains probable helix-turn-helix motif at aa 37-58 (Score 982%2C +2.53 SD);gbkey=CDS;gene=SCH10.10c;product=hypothetical protein;protein_id=NP_627826.1;transl_table=11
NC_003888.3	RefSeq	gene	4010391	4011326	.	+	.	ID=gene3659;Dbxref=GeneID:1099069;Name=SCH10.11;gbkey=Gene;gene=SCH10.11;gene_biotype=protein_coding;gene_synonym=SCH10.11;locus_tag=SCO3633
NC_003888.3	RefSeq	CDS	4010391	4011326	.	+	0	ID=cds3588;Parent=gene3659;Dbxref=Genbank:NP_627827.1,GeneID:1099069;Name=NP_627827.1;Note=SCH10.11%2C probable ABC transporter ATP-binding protein%2C len: 311 aa%3B similar to many e.g. TR:Q54406 (EMBL:X73633)%2C tnrB2%2C from Streptomyces longisporoflavus%2C which is a component of an ABC transport system which confers resistance to the polyether-ionophore antibiotic tetronasin (300 aa)%2C fasta scores%3B opt: 1323 z-score: 1477.2 E(): 0%2C 67.5%25 identity in 305 aa overlap. Also similar to TR:O86311 (EMBL:Z93777) M.tuberculosis hypothetical protein (311 aa) (63.0%25 identity in 305 aa overlap). Similar to many ABC transporter ATP-binding proteins from Streptomyces coelicolor e.g. SCD78.23 (EMBL:AL034355) ABC transporter ATP-binding protein (320 aa) (34.9%25 identity in 258 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 169.60%2C E-value 5.4e-47%2C PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCH10.11;product=ABC transporter ATP-binding protein;protein_id=NP_627827.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4010478	4011008	.	+	.	ID=id4528;Dbxref=GeneID:1099069;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 169.60%2C E-value 5.4e-47;gbkey=misc_feature;gene=SCH10.11
NC_003888.3	RefSeq	sequence_feature	4010499	4010522	.	+	.	ID=id4529;Dbxref=GeneID:1099069;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH10.11
NC_003888.3	RefSeq	sequence_feature	4010781	4010825	.	+	.	ID=id4530;Dbxref=GeneID:1099069;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCH10.11
NC_003888.3	RefSeq	gene	4011323	4012942	.	+	.	ID=gene3660;Dbxref=GeneID:1099070;Name=SCH10.12;gbkey=Gene;gene=SCH10.12;gene_biotype=protein_coding;gene_synonym=SCH10.12;locus_tag=SCO3634
NC_003888.3	RefSeq	CDS	4011323	4012942	.	+	0	ID=cds3589;Parent=gene3660;Dbxref=Genbank:NP_627828.1,GeneID:1099070;Name=NP_627828.1;Note=SCH10.12%2C possible ABC transporter membrane-spanning protein%2C len: 539 aa%3B similar to TR:Q54407 (EMBL:X73633)%2C tnrB3%2C from Streptomyces longisporoflavus%2C which is a component of an ABC transport system which confers resistance to the polyether-ionophore antibiotic tetronasin (337 aa)%2C fasta scores%3B opt: 1086 z-score: 933.6 E(): 0%2C 35.6%25 identity in 531 aa overla. Also similar to TR:O05318 (EMBL:Z93777) Mycobacterium tuberculosis hypothetical protein (548 aa) (40.9%25 identity in 550 aa overlap). Contains hydrophobic%2C probable membrane-spanning regions. Weakly similar to SC4B5.03c (EMBL:AL034443) Streptomyces coelicolor probable integral membrane efflux protein (504 aa) (26.8%25 identity in 373 aa overlap). Contains PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SCH10.12;product=ABC transporter membrane-spanning protein;protein_id=NP_627828.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4012094	4012180	.	+	.	ID=id4531;Dbxref=GeneID:1099070;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCH10.12
NC_003888.3	RefSeq	gene	4013295	4013696	.	-	.	ID=gene3661;Dbxref=GeneID:1099071;Name=SCH10.13c;gbkey=Gene;gene=SCH10.13c;gene_biotype=protein_coding;gene_synonym=SCH10.13c;locus_tag=SCO3635
NC_003888.3	RefSeq	CDS	4013295	4013696	.	-	0	ID=cds3590;Parent=gene3661;Dbxref=Genbank:NP_627829.1,GeneID:1099071;Name=NP_627829.1;Note=SCH10.13c%2C hypothetical protein%2C len: 133 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCH10.13c;product=hypothetical protein;protein_id=NP_627829.1;transl_table=11
NC_003888.3	RefSeq	gene	4013901	4015136	.	-	.	ID=gene3662;Dbxref=GeneID:1099072;Name=SCH10.14c;gbkey=Gene;gene=SCH10.14c;gene_biotype=protein_coding;gene_synonym=SCH10.14c;locus_tag=SCO3636
NC_003888.3	RefSeq	CDS	4013901	4015136	.	-	0	ID=cds3591;Parent=gene3662;Dbxref=Genbank:NP_627830.1,GeneID:1099072;Name=NP_627830.1;Note=SCH10.14c%2C probable cytochrome P-450 hydroxylase%2C len: 411 aa%3B similar to many e.g. SW:CPXJ_SACER (EMBL:X60379)%2C EryF%2C Saccharopolyspora erythraea 6-deoxyerythronolide B hydroxylase (404 aa)%2C fasta scores%3B opt: 920 z-score: 1001.6 E(): 0%2C 39.2%25 identity in 406 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 174.40%2C E-value 1.9e-48 and PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=CDS;gene=SCH10.14c;product=cytochrome P-450 hydroxylase;protein_id=NP_627830.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4013904	4015079	.	-	.	ID=id4532;Dbxref=GeneID:1099072;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 174.40%2C E-value 1.9e-48;gbkey=misc_feature;gene=SCH10.14c
NC_003888.3	RefSeq	sequence_feature	4014042	4014071	.	-	.	ID=id4533;Dbxref=GeneID:1099072;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SCH10.14c
NC_003888.3	RefSeq	gene	4015264	4015701	.	+	.	ID=gene3663;Dbxref=GeneID:1099073;Name=SCH10.15;gbkey=Gene;gene=SCH10.15;gene_biotype=protein_coding;gene_synonym=SCH10.15;locus_tag=SCO3637
NC_003888.3	RefSeq	CDS	4015264	4015701	.	+	0	ID=cds3592;Parent=gene3663;Dbxref=Genbank:NP_627831.1,GeneID:1099073;Name=NP_627831.1;Note=SCH10.15%2C membrane protein%2C len: 145 aa%3B unknown function%2C probable CDS suggested by positional base preference and GC frame analysis. N-terminal half is hydrophobic%2C while remainder is hydrophilic. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH10.15;product=hypothetical protein;protein_id=NP_627831.1;transl_table=11
NC_003888.3	RefSeq	gene	4015726	4016391	.	-	.	ID=gene3664;Dbxref=GeneID:1099074;Name=SCH10.16c;gbkey=Gene;gene=SCH10.16c;gene_biotype=protein_coding;gene_synonym=SCH10.16c;locus_tag=SCO3638
NC_003888.3	RefSeq	CDS	4015726	4016391	.	-	0	ID=cds3593;Parent=gene3664;Dbxref=Genbank:NP_627832.1,GeneID:1099074;Name=NP_627832.1;Note=SCH10.16c%2C probable two-component system regulator%2C len: 221 aa%3B similar to many e.g. TR:Q53894 (EMBL:U51332)%2C AbsA2%2C Streptomyces coelicolor two-component system regulator homolog involved in negative regulation of antibiotic synthesis (222 aa)%2C fasta scores%3B opt: 610 z-score: 722.5 E(): 6.2e-33%2C 48.1%25 identity in 216 aa overlap. Similar to many other two-component system regulators from Streptomyces coelicolor e.g. SCH10.18c%2C probable two-component regulator (218 aa) (76.1%25 identity in 218 aa overlap). Contains Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 118.30%2C E-value 1.5e-31 and entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 73.00%2C E-value 6.4e-18. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature. Contains probable helix-turn-helix motif at aa 174-195 (Score 1032%2C +2.70 SD);gbkey=CDS;gene=SCH10.16c;product=two-component system regulator;protein_id=NP_627832.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4015730	4017040	.	-	.	ID=id4534;Note=repeat 1%3B approx. 1400 bp imperfect direct repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4015732	4015929	.	-	.	ID=id4535;Dbxref=GeneID:1099074;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 73.00%2C E-value 6.4e-18;gbkey=misc_feature;gene=SCH10.16c
NC_003888.3	RefSeq	sequence_feature	4015795	4015878	.	-	.	ID=id4536;Dbxref=GeneID:1099074;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCH10.16c
NC_003888.3	RefSeq	sequence_feature	4016044	4016385	.	-	.	ID=id4537;Dbxref=GeneID:1099074;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 118.30%2C E-value 1.5e-31;gbkey=misc_feature;gene=SCH10.16c
NC_003888.3	RefSeq	gene	4016388	4017806	.	-	.	ID=gene3665;Dbxref=GeneID:1099075;Name=SCH10.17c;gbkey=Gene;gene=SCH10.17c;gene_biotype=protein_coding;gene_synonym=SCH10.17c;locus_tag=SCO3639
NC_003888.3	RefSeq	CDS	4016388	4017806	.	-	0	ID=cds3594;Parent=gene3665;Dbxref=Genbank:NP_627833.1,GeneID:1099075;Name=NP_627833.1;Note=SCH10.17c%2C probable two-component system sensor kinase%2C len: 472 aa%3B similar to many e.g. TR:Q53893 (EMBL:U51332)%2C AbsA1%2C Streptomyces coelicolor histidine kinase homolog involved in negative regulation of antibiotic synthesis (571 aa)%2C fasta scores%3B opt: 370 z-score: 410.4 E(): 1.5e-15%2C 29.6%25 identity in 375 aa overlap. Also similar to SW:NARX_ECOLI (EMBL:X13360)%2C NarX%2C NarR%2C Escherichia coli nitrate/nitrite sensor protein (598 aa) (28.5%25 identity in 228 aa overlap). Contains hydrophobic%2C probable membrane-spanning regions. Similar to many other two-component system sensor kinases from Streptomyces coelicolor e.g. SCH10.32c%2C probable two-component system sensor (441 aa) (38.0%25 identity in 389 aa overlap). Contains probable helix-turn-helix motif at aa 235-256 (Score 1122%2C +3.01 SD). The start codon may be further downstream%2C which would agree with some other bacterial two-component system sensors%3B however%2C NarX has a length comparable to this prediction;gbkey=CDS;gene=SCH10.17c;product=two-component system sensor kinase;protein_id=NP_627833.1;transl_table=11
NC_003888.3	RefSeq	gene	4017820	4018506	.	-	.	ID=gene3666;Dbxref=GeneID:1099076;Name=SCH10.18c;gbkey=Gene;gene=SCH10.18c;gene_biotype=protein_coding;gene_synonym=SCH10.18c;locus_tag=SCO3640
NC_003888.3	RefSeq	CDS	4017820	4018506	.	-	0	ID=cds3595;Parent=gene3666;Dbxref=Genbank:NP_627834.1,GeneID:1099076;Name=NP_627834.1;Note=SCH10.18c%2C probable two-component system regulator%2C len: 228 aa%3B similar to many e.g. TR:Q53894 (EMBL:U51332)%2C AbsA2%2C Streptomyces coelicolor two-component system regulator homolog involved in negative regulation of antibiotic synthesis (222 aa)%2C fasta scores%3B opt: 616 z-score: 718.4 E(): 1.1e-32%2C 46.6%25 identity in 219 aa overlap. Similar to many other two-component system regulators from Streptomyces coelicolor e.g. SCH10.16c%2C probable two-component regulator (221 aa) (76.1%25 identity in 218 aa overlap). Contains Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 118.10%2C E-value 1.7e-31 and ntry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 81.60%2C E-value 1.6e-20. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=CDS;gene=SCH10.18c;product=two-component system regulator;protein_id=NP_627834.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4017832	4018029	.	-	.	ID=id4538;Dbxref=GeneID:1099076;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 81.60%2C E-value 1.6e-20;gbkey=misc_feature;gene=SCH10.18c
NC_003888.3	RefSeq	repeat_region	4017838	4019264	.	-	.	ID=id4539;Note=repeat 1%3B approx. 1400 bp imperfect direct repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4017895	4017978	.	-	.	ID=id4540;Dbxref=GeneID:1099076;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCH10.18c
NC_003888.3	RefSeq	sequence_feature	4018138	4018479	.	-	.	ID=id4541;Dbxref=GeneID:1099076;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 118.10%2C E-value 1.7e-31;gbkey=misc_feature;gene=SCH10.18c
NC_003888.3	RefSeq	gene	4018503	4019882	.	-	.	ID=gene3667;Dbxref=GeneID:1099077;Name=SCH10.19c;gbkey=Gene;gene=SCH10.19c;gene_biotype=protein_coding;gene_synonym=SCH10.19c;locus_tag=SCO3641
NC_003888.3	RefSeq	CDS	4018503	4019882	.	-	0	ID=cds3596;Parent=gene3667;Dbxref=Genbank:NP_627835.1,GeneID:1099077;Name=NP_627835.1;Note=SCH10.19c%2C probable two-component system sensor kinase%2C len: 459 aa%3B similar to many e.g. TR:Q53893 (EMBL:U51332)%2C AbsA1%2C Streptomyces coelicolor histidine kinase homolog involved in negative regulation of antibiotic synthesis (571 aa)%2C fasta scores%3B opt: 332 z-score: 342.7 E(): 8.9e-12%2C 30.6%25 identity in 402 aa overlap. Contains hydrophobic%2C probable membrane-spanning regions. Similar to many other  two-component system sensor kinases from Streptomyces coelicolor e.g. TR:O86631 (EMBL:AL031155) SC3A7.30%2C probable two-component system sensor (429 aa) (36.2%25 identity in 409 aa overlap). Contains probable coiled-coil from 264 to 292 (29 residues) (Max score: 1.426%2C probability 0.81). The start codon may be further downstream%2C which would agree with some other bacterial two-component system sensors%3B however%2C nitrate/nitrite sensory proteins have a length comparable to this prediction;gbkey=CDS;gene=SCH10.19c;product=two-component system sensor kinase;protein_id=NP_627835.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4019798	4019848	.	-	.	ID=id4542;Dbxref=GeneID:1099077;Note=39 bp inverted repeat;gbkey=repeat_region;gene=SCH10.19c
NC_003888.3	RefSeq	gene	4019875	4021137	.	-	.	ID=gene3668;Dbxref=GeneID:1099078;Name=SCH10.20c;gbkey=Gene;gene=SCH10.20c;gene_biotype=protein_coding;gene_synonym=SCH10.20c;locus_tag=SCO3642
NC_003888.3	RefSeq	CDS	4019875	4021137	.	-	0	ID=cds3597;Parent=gene3668;Dbxref=Genbank:NP_627836.1,GeneID:1099078;Name=NP_627836.1;Note=SCH10.20c%2C hypothetical membrane protein%2C len: 420 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains several hydrophobic%2C probable membrane-spanning regions. Contains PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature;gbkey=CDS;gene=SCH10.20c;product=hypothetical protein;protein_id=NP_627836.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4020755	4020805	.	-	.	ID=id4543;Dbxref=GeneID:1099078;Note=49 bp inverted repeat;gbkey=repeat_region;gene=SCH10.20c
NC_003888.3	RefSeq	sequence_feature	4020871	4020903	.	-	.	ID=id4544;Dbxref=GeneID:1099078;Note=PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature;gbkey=misc_feature;gene=SCH10.20c
NC_003888.3	RefSeq	gene	4021130	4022119	.	-	.	ID=gene3669;Dbxref=GeneID:1099079;Name=SCH10.21c;gbkey=Gene;gene=SCH10.21c;gene_biotype=protein_coding;gene_synonym=SCH10.21c;locus_tag=SCO3643
NC_003888.3	RefSeq	CDS	4021130	4022119	.	-	0	ID=cds3598;Parent=gene3669;Dbxref=Genbank:NP_627837.1,GeneID:1099079;Name=NP_627837.1;Note=SCH10.21c%2C hypothetical protein%2C len: 329 aa%3B unknown function%2C weakly similar to SW:YT11_MYCTU (EMBL:Z79700) Mycobacterium tuberculosis hypothetical protein (266 aa)%2C fasta scores%3B opt: 183 z-score: 199.4 E(): 0.00086%2C 30.7%25 identity in 225 aa overlap;gbkey=CDS;gene=SCH10.21c;product=hypothetical protein;protein_id=NP_627837.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4021144	4021148	.	-	.	ID=id4545;Dbxref=GeneID:1099079;Note=possible RBS;gbkey=RBS;gene=SCH10.21c
NC_003888.3	RefSeq	repeat_region	4021687	4021745	.	-	.	ID=id4546;Dbxref=GeneID:1099079;Note=58 bp inverted repeat;gbkey=repeat_region;gene=SCH10.21c
NC_003888.3	RefSeq	gene	4022264	4023169	.	-	.	ID=gene3670;Dbxref=GeneID:1099080;Name=SCH10.22c;gbkey=Gene;gene=SCH10.22c;gene_biotype=protein_coding;gene_synonym=SCH10.22c;locus_tag=SCO3644
NC_003888.3	RefSeq	CDS	4022264	4023169	.	-	0	ID=cds3599;Parent=gene3670;Dbxref=Genbank:NP_627838.1,GeneID:1099080;Name=NP_627838.1;Note=SCH10.22c%2C possible lipase/esterase%2C len: 301 aa%3B weakly similar to many esterases e.g. SW:EST1_CAEEL (EMBL:M96145) Caenorhabditis elegans gut esterase precursor (562 aa)%2C fasta scores%3B opt: 150 z-score: 166.4 E(): 0.059%2C 29.3%25 identity in 280 aa overlap. Contains PS00120 Lipases%2C serine active site;gbkey=CDS;gene=SCH10.22c;product=lipase/esterase;protein_id=NP_627838.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4022696	4022725	.	-	.	ID=id4547;Dbxref=GeneID:1099080;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=SCH10.22c
NC_003888.3	RefSeq	repeat_region	4023341	4023399	.	-	.	ID=id4548;Note=58 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4023366	4024598	.	-	.	ID=gene3671;Dbxref=GeneID:1099081;Name=SCH10.23c;gbkey=Gene;gene=SCH10.23c;gene_biotype=protein_coding;gene_synonym=SCH10.23c;locus_tag=SCO3645
NC_003888.3	RefSeq	CDS	4023366	4024598	.	-	0	ID=cds3600;Parent=gene3671;Dbxref=Genbank:NP_627839.1,GeneID:1099081;Name=NP_627839.1;Note=SCH10.23c%2C probable hydrolase%2C len: 410 aa%3B similar to e.g. SW:KYNU_RAT (EMBL:U68168) Rattus norvegicus L-kynurenine hydrolase (464 aa)%2C fasta scores%3B opt: 458 z-score: 408.3 E(): 2e-15%2C 27.9%25 identity in 462 aa overlap;gbkey=CDS;gene=SCH10.23c;product=hydrolase;protein_id=NP_627839.1;transl_table=11
NC_003888.3	RefSeq	gene	4024591	4025406	.	-	.	ID=gene3672;Dbxref=GeneID:1099082;Name=SCH10.24c;gbkey=Gene;gene=SCH10.24c;gene_biotype=protein_coding;gene_synonym=SCH10.24c;locus_tag=SCO3646
NC_003888.3	RefSeq	CDS	4024591	4025406	.	-	0	ID=cds3601;Parent=gene3672;Dbxref=Genbank:NP_627840.1,GeneID:1099082;Name=NP_627840.1;Note=SCH10.24c%2C probable oxidoreductase%2C len: 271 aa%3B weakly similar to tryptophan oxygenases e.g. TR:O77457 (EMBL:L76433) Anopheles gambiae tryptophan oxygenase (392 aa)%2C fasta scores%3B opt: 184 z-score: 222.0 E(): 4.7e-05%2C 24.9%25 identity in 341 aa overlap;gbkey=CDS;gene=SCH10.24c;product=oxidoreductase;protein_id=NP_627840.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4025413	4025417	.	-	.	ID=id4549;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4025550	4025981	.	-	.	ID=gene3673;Dbxref=GeneID:1099083;Name=SCH10.25c;gbkey=Gene;gene=SCH10.25c;gene_biotype=protein_coding;gene_synonym=SCH10.25c;locus_tag=SCO3647
NC_003888.3	RefSeq	CDS	4025550	4025981	.	-	0	ID=cds3602;Parent=gene3673;Dbxref=Genbank:NP_627841.1,GeneID:1099083;Name=NP_627841.1;Note=SCH10.25c%2C conserved hypothetical protein%2C len: 143 aa%3B unknown function%2C similar to TR:O06310 (EMBL:Z95324) Mycobacterium tuberculosis hypothetical protein (145 aa)%2C fasta scores%3B opt: 497 z-score: 431.5 E(): 1e-16%2C 55.8%25 identity in 138 aa overlap and TR:O69598 (EMBL:AL023514) Mycobacterium leprae hypothetical protein (137 aa) (56.2%25 identity in 130 aa overlap);gbkey=CDS;gene=SCH10.25c;product=hypothetical protein;protein_id=NP_627841.1;transl_table=11
NC_003888.3	RefSeq	gene	4026217	4027671	.	-	.	ID=gene3674;Dbxref=GeneID:1099084;Name=SCH10.26c;gbkey=Gene;gene=SCH10.26c;gene_biotype=protein_coding;gene_synonym=SCH10.26c;locus_tag=SCO3648
NC_003888.3	RefSeq	CDS	4026217	4027671	.	-	0	ID=cds3603;Parent=gene3674;Dbxref=Genbank:NP_627842.1,GeneID:1099084;Name=NP_627842.1;Note=SCH10.26c%2C probable transmembrane efflux protein%2C len: 484 aa%3B similar to many members of the major facilitator family%2C e.g. SW:PUR8_STRLP (EMBL:X76855)%2C pur8%2C Streptomyces lipmanii puromycin resistance protein (503 aa)%2C fasta scores%3B opt: 871 z-score: 937.9 E(): 0%2C 37.3%25 identity in 475 aa overlap. Contains several hydrophobic%2C probable membrane-spanning regions. Similar to many efflux pumps from Streptomyces coelicolor e.g. TR:O69986 (EMBL:AL022268) SC4H2.31c%2C probable transmembrane efflux protein (515 aa) (38.8%25 identity in 412 aa overlap). Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -78.80%2C E-value 0.003;gbkey=CDS;gene=SCH10.26c;product=transmembrane efflux protein;protein_id=NP_627842.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4026304	4027635	.	-	.	ID=id4550;Dbxref=GeneID:1099084;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -78.80%2C E-value 0.003;gbkey=misc_feature;gene=SCH10.26c
NC_003888.3	RefSeq	repeat_region	4026689	4026721	.	-	.	ID=id4551;Dbxref=GeneID:1099084;Note=33 bp inverted repeat;gbkey=repeat_region;gene=SCH10.26c
NC_003888.3	RefSeq	repeat_region	4026960	4026992	.	-	.	ID=id4552;Dbxref=GeneID:1099084;Note=33 bp inverted repeat;gbkey=repeat_region;gene=SCH10.26c
NC_003888.3	RefSeq	gene	4027742	4028773	.	-	.	ID=gene3675;Dbxref=GeneID:1099085;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;gene_synonym=fba,SCH10.27c;locus_tag=SCO3649
NC_003888.3	RefSeq	CDS	4027742	4028773	.	-	0	ID=cds3604;Parent=gene3675;Dbxref=Genbank:NP_627843.1,GeneID:1099085;Name=NP_627843.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;gene=fba;product=fructose-bisphosphate aldolase;protein_id=NP_627843.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4027751	4028761	.	-	.	ID=id4553;Dbxref=GeneID:1099085;Note=Pfam match to entry PF01116 F_bP_aldolase%2C Fructose-bisphosphate aldolase class-II%2C score 426.40%2C E-value 2.5e-124;gbkey=misc_feature;gene=fba
NC_003888.3	RefSeq	ribosome_entry_site	4028781	4028785	.	-	.	ID=id4554;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4028946	4029494	.	-	.	ID=gene3676;Dbxref=GeneID:1099086;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;gene_synonym=SCH10.28c;locus_tag=SCO3650
NC_003888.3	RefSeq	CDS	4028946	4029494	.	-	0	ID=cds3605;Parent=gene3676;Dbxref=Genbank:NP_627844.1,GeneID:1099086;Name=NP_627844.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=NP_627844.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4028952	4029422	.	-	.	ID=id4555;Dbxref=GeneID:1099086;Note=Pfam match to entry PF00156 Pribosyltran%2C Purine/pyrimidine phosphoribosyl transferases%2C score -8.60%2C E-value 0.0025;gbkey=misc_feature;gene=pyrE
NC_003888.3	RefSeq	gene	4029505	4030293	.	-	.	ID=gene3677;Dbxref=GeneID:1099087;Name=SCH1029c1;gbkey=Gene;gene=SCH1029c1;gene_biotype=protein_coding;gene_synonym=SCH1029c1;locus_tag=SCO3651
NC_003888.3	RefSeq	CDS	4029505	4030293	.	-	0	ID=cds3606;Parent=gene3677;Dbxref=Genbank:NP_627845.1,GeneID:1099087;Name=NP_627845.1;Note=SCH10.29c%2C hypothetical protein%2C len: 262 aa%3B unknown function%2C weakly similar to SW:YPHB_ECOLI (EMBL:AE000340)%2C YphB%2C Escherichia coli hypothetical protein (290 aa)%2C fasta scores%3B opt: 225 z-score: 270.0 E(): 1e-07%2C 26.4%25 identity in 239 aa overlap and SW:YIHR_ECOLI (EMBL:L19201)%2C YihR%2C Escherichia coli hypothetical protein (308 aa) (26.3%25 identity in 270 aa overlap);gbkey=CDS;gene=SCH1029c1;product=hypothetical protein;protein_id=NP_627845.1;transl_table=11
NC_003888.3	RefSeq	gene	4030362	4031294	.	-	.	ID=gene3678;Dbxref=GeneID:1099088;Name=SCH10.30c;gbkey=Gene;gene=SCH10.30c;gene_biotype=protein_coding;gene_synonym=SCH10.30c;locus_tag=SCO3652
NC_003888.3	RefSeq	CDS	4030362	4031294	.	-	0	ID=cds3607;Parent=gene3678;Dbxref=Genbank:NP_627846.1,GeneID:1099088;Name=NP_627846.1;Note=SCH10.30c%2C membrane protein%2C len: 310 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains possible hydrophobic membrane spanning region at the C-terminal domain;gbkey=CDS;gene=SCH10.30c;product=hypothetical protein;protein_id=NP_627846.1;transl_table=11
NC_003888.3	RefSeq	gene	4031299	4032045	.	-	.	ID=gene3679;Dbxref=GeneID:1099089;Name=SCH10.31c;gbkey=Gene;gene=SCH10.31c;gene_biotype=protein_coding;gene_synonym=SCH10.31c;locus_tag=SCO3653
NC_003888.3	RefSeq	CDS	4031299	4032045	.	-	0	ID=cds3608;Parent=gene3679;Dbxref=Genbank:NP_627847.1,GeneID:1099089;Name=NP_627847.1;Note=SCH10.31c%2C probable two-component system regulator%2C len: 248 aa%3B similar to many e.g. TR:Q53894 (EMBL:U51332)%2C AbsA2%2C Streptomyces coelicolor two-component system regulator homolog involved in negative regulation of antibiotic synthesis (222 aa)%2C fasta scores%3B opt: 583 z-score: 647.2 E(): 9.8e-29%2C 45.0%25 identity in 222 aa overlap. Similar to many other two-component system regulators from Streptomyces coelicolor e.g. SCH10.18c%2C probable two-component regulator (228 aa) (56.2%25 identity in 226 aa overlap). Contains Pfam matches to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 80.40%2C E-value 3.7e-20 and entry PF00072 response_reg%2C Response regulator receiver domain%2C score 127.40%2C E-value 2.5e-34. Contains probable helix-turn-helix motif at aa 196-217 (Score 1378%2C +3.88 SD);gbkey=CDS;gene=SCH10.31c;product=two-component system regulator;protein_id=NP_627847.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4031314	4032719	.	-	.	ID=id4556;Note=repeat 1%3B approx. 1400 bp imperfect direct repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4031320	4031517	.	-	.	ID=id4557;Dbxref=GeneID:1099089;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 80.40%2C E-value 3.7e-20;gbkey=misc_feature;gene=SCH10.31c
NC_003888.3	RefSeq	sequence_feature	4031644	4031991	.	-	.	ID=id4558;Dbxref=GeneID:1099089;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 127.40%2C E-value 2.5e-34;gbkey=misc_feature;gene=SCH10.31c
NC_003888.3	RefSeq	gene	4032042	4033367	.	-	.	ID=gene3680;Dbxref=GeneID:1099090;Name=SCH10.32c;gbkey=Gene;gene=SCH10.32c;gene_biotype=protein_coding;gene_synonym=SCH10.32c;locus_tag=SCO3654
NC_003888.3	RefSeq	CDS	4032042	4033367	.	-	0	ID=cds3609;Parent=gene3680;Dbxref=Genbank:NP_627848.1,GeneID:1099090;Name=NP_627848.1;Note=SCH10.32c%2C probable two-component system sensor kinase%2C len: 441 aa%3B similar to many e.g. TR:Q53893 (EMBL:U51332)%2C AbsA1%2C Streptomyces coelicolor histidine kinase homolog involved in negative regulation of antibiotic synthesis (571 aa)%2C fasta scores%3B opt: 474 z-score: 452.1 E(): 7.2e-18%2C 32.8%25 identity in 381 aa overlap. Also similar to SW:NARX_ECOLI (EMBL:X13360)%2C NarX%2C NarR%2C Escherichia coli nitrate/nitrite sensor protein (598 aa) (28.2%25 identity in 234 aa overlap). Contains hydrophobic%2C probable membrane-spanning regions. Similar to many other two-component system sensor kinases from Streptomyces coelicolor e.g. SCH10.17c%2C probable two-component system sensor (472 aa) (38.0%25 identity in 389 aa overlap). The start codon may be further downstream%2C which would agree with some other bacterial two-component system sensors%3B however%2C NarX has a length comparable to this prediction;gbkey=CDS;gene=SCH10.32c;product=two-component system sensor kinase;protein_id=NP_627848.1;transl_table=11
NC_003888.3	RefSeq	gene	4033456	4035120	.	-	.	ID=gene3681;Dbxref=GeneID:1099091;Name=SCH10.33c;gbkey=Gene;gene=SCH10.33c;gene_biotype=protein_coding;gene_synonym=SCH10.33c;locus_tag=SCO3655
NC_003888.3	RefSeq	CDS	4033456	4035120	.	-	0	ID=cds3610;Parent=gene3681;Dbxref=Genbank:NP_627849.1,GeneID:1099091;Name=NP_627849.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;gene=SCH10.33c;product=spermidine synthase;protein_id=NP_627849.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4033648	4033713	.	-	.	ID=id4559;Dbxref=GeneID:1099091;Note=approx. 5 highly degenerate repeats;gbkey=repeat_region;gene=SCH10.33c
NC_003888.3	RefSeq	gene	4035252	4035809	.	-	.	ID=gene3682;Dbxref=GeneID:1099092;Name=SCH10.34c;gbkey=Gene;gene=SCH10.34c;gene_biotype=protein_coding;gene_synonym=SCH10.34c;locus_tag=SCO3656
NC_003888.3	RefSeq	CDS	4035252	4035809	.	-	0	ID=cds3611;Parent=gene3682;Dbxref=Genbank:NP_627850.1,GeneID:1099092;Name=NP_627850.1;Note=SCH10.34c%2C hypothetical protein%2C len: 185 aa%3B unknown function%2C similar to SW:Y0B3_MYCTU (EMBL:Z77724) Mycobacterium tuberculosis hypothetical protein (164 aa)%2C fasta scores%3B opt: 197 z-score: 256.6 E(): 5.6e-07%2C 34.7%25 identity in 167 aa overlap;gbkey=CDS;gene=SCH10.34c;product=hypothetical protein;protein_id=NP_627850.1;transl_table=11
NC_003888.3	RefSeq	gene	4035996	4036406	.	-	.	ID=gene3683;Dbxref=GeneID:1099093;Name=SCH10.35c;gbkey=Gene;gene=SCH10.35c;gene_biotype=protein_coding;gene_synonym=SCH10.35c;locus_tag=SCO3657
NC_003888.3	RefSeq	CDS	4035996	4036406	.	-	0	ID=cds3612;Parent=gene3683;Dbxref=Genbank:NP_627851.1,GeneID:1099093;Name=NP_627851.1;Note=SCH10.35c%2C hypothetical protein%2C len: 136 aa%3B unknown function%2C improbable Ala-rich CDS suggested by positional base preference;gbkey=CDS;gene=SCH10.35c;product=hypothetical protein;protein_id=NP_627851.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4036677	4036680	.	+	.	ID=id4560;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4036689	4037879	.	+	.	ID=gene3684;Dbxref=GeneID:1099094;Name=SCH10.36;gbkey=Gene;gene=SCH10.36;gene_biotype=protein_coding;gene_synonym=SCH10.36;locus_tag=SCO3658
NC_003888.3	RefSeq	CDS	4036689	4037879	.	+	0	ID=cds3613;Parent=gene3684;Dbxref=Genbank:NP_627852.1,GeneID:1099094;Name=NP_627852.1;Note=SCH10.36%2C probable aspartate aminotransferase%2C len: 399 aa%3B similar to many e.g. TR:Q56232 (EMBL:D38459) Thermus aquaticus aspartate aminotransferase (385 aa)%2C fasta scores%3B opt: 731 z-score: 825.9 E(): 0%2C 36.5%25 identity in 392 aa overlap. Note that there are three possible start codons. Similar to many aminotransferases from Streptomyces coelicolor e.g. TR:O54170 (EMBL:AL021411) SC7H1.11%2C aminotransferase (382 aa) (36.6%25 identity in 331 aa overlap). Contains Pfam match to entry PF00155 aminotran_1%2C Aminotransferases class-I%2C score 159.80%2C E-value 4.6e-44;gbkey=CDS;gene=SCH10.36;product=aminotransferase;protein_id=NP_627852.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4036689	4037867	.	+	.	ID=id4561;Dbxref=GeneID:1099094;Note=Pfam match to entry PF00155 aminotran_1%2C Aminotransferases class-I%2C score 159.80%2C E-value 4.6e-44;gbkey=misc_feature;gene=SCH10.36
NC_003888.3	RefSeq	stem_loop	4037914	4037951	.	-	.	ID=id4562;Note=17/17 bp (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4037975	4038511	.	-	.	ID=gene3685;Dbxref=GeneID:1099095;Name=SCH10.37c;gbkey=Gene;gene=SCH10.37c;gene_biotype=protein_coding;gene_synonym=SCH10.37c;locus_tag=SCO3659
NC_003888.3	RefSeq	CDS	4037975	4038511	.	-	0	ID=cds3614;Parent=gene3685;Dbxref=Genbank:NP_627853.1,GeneID:1099095;Name=NP_627853.1;Note=SCH10.37c%2C hypothetical protein%2C len: 178 aa%3B unknown function%2C has unusally low percentage G+C content;gbkey=CDS;gene=SCH10.37c;product=hypothetical protein;protein_id=NP_627853.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4038521	4038525	.	-	.	ID=id4563;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4038637	4040280	.	-	.	ID=gene3686;Dbxref=GeneID:1099096;Name=SCH10.38c;gbkey=Gene;gene=SCH10.38c;gene_biotype=protein_coding;gene_synonym=SCH10.38c;locus_tag=SCO3660
NC_003888.3	RefSeq	CDS	4038637	4040280	.	-	0	ID=cds3615;Parent=gene3686;Dbxref=Genbank:NP_627854.1,GeneID:1099096;Name=NP_627854.1;Note=SCH10.38c%2C hypothetical protein%2C len: 547 aa%3B unknown function%2C N-terminus similar to TR:O69933 (EMBL:AL023861)%2C SC3C8.24%2C Streptomyces coelicolor DNA recombinase (672 aa)%2C fasta scores%3B opt: 192 z-score: 225.8 E(): 2.9e-05%2C 24.5%25 identity in 498 aa overlap. Weakly similar to many resolvases. Has unusally low percentage G+C content. Weakly similar to TR:O69933 (EMBL:AL023861) SC3C8.24%2C Streptomyces coelicolor DNA recombinase (672 aa) (24.5%25 identity in 498 aa overlap);gbkey=CDS;gene=SCH10.38c;product=hypothetical protein;protein_id=NP_627854.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4040290	4040294	.	-	.	ID=id4564;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4040450	4043047	.	-	.	ID=gene3687;Dbxref=GeneID:1099097;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;gene_synonym=clpB,SCH10.39c,SCH44.01c;locus_tag=SCO3661
NC_003888.3	RefSeq	CDS	4040450	4043047	.	-	0	ID=cds3616;Parent=gene3687;Dbxref=Genbank:NP_733613.1,GeneID:1099097;Name=NP_733613.1;Note=clpB%2C SCH10.39c%2C probable clp-family ATP-binding subunit%2C partial CDS%2C len: >853 aa%3B similar to many e.g. SW:CLPB_ECOLI (EMBL:M29364) Escherichia coli ATP-dependent protease regulatory subunit (857 aa)%2C fasta scores%3B opt: 3039 z-score: 2963.3 E(): 0%2C 56.5%25 identity in 844 aa overlap. Similar to TR:O69936 (EMBL:AL023861)%2C SC3C8.27c%2C clpA%2C Streptomyces coelicolor probable clp protease ATP-binding subunit (842 aa) (47.5%25 identity in 854 aa overlap) and SCE94.24c (EMBL:AL049628) Streptomyces coelicolor probable clp protease ATP-binding subunit (841 aa) (48.5%25 identity in 845 aa overlap). Contains Pfam match to entry PF00495 clpA_B%2C Chaperonin clpA/B%2C score 696.80%2C E-value 1e-205%2C PS00870 Chaperonins clpA/B signature 1%2C PS00871 Chaperonins clpA/B signature 2 and two PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from 421 to 491 (71 residues) (Max score: 1.708%2C probability 1.00)~SCH44.01c%2C clpB%2C ATP-dependent protease ATP-binding subunit (fragment) len: >44 aa%3B highly similar to N-terminal domain of TR:Q9Z6E4 (EMBL:AF076980) Streptomyces albus g. heat shock protein ClpB%2C 857 aa%3B fasta scores: opt: 233 z-score: 369.6 E(): 4e-13%3B 81.8%25 identity in 44 aa overlap;gbkey=CDS;gene=clpB;product=ATP-dependent protease ATP-binding subunit;protein_id=NP_733613.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4040504	4041448	.	-	.	ID=id4565;Dbxref=GeneID:1099097;Note=Pfam match to entry PF00495 clpA_B%2C Chaperonin clpA/B%2C score 696.80%2C E-value 1e-205;gbkey=misc_feature;gene=clpB
NC_003888.3	RefSeq	sequence_feature	4041089	4041145	.	-	.	ID=id4566;Dbxref=GeneID:1099097;Note=PS00871 Chaperonins clpA/B signature 2;gbkey=misc_feature;gene=clpB
NC_003888.3	RefSeq	sequence_feature	4041200	4041223	.	-	.	ID=id4567;Dbxref=GeneID:1099097;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=clpB
NC_003888.3	RefSeq	sequence_feature	4042124	4042162	.	-	.	ID=id4568;Dbxref=GeneID:1099097;Note=PS00870 Chaperonins clpA/B signature 1;gbkey=misc_feature;gene=clpB
NC_003888.3	RefSeq	sequence_feature	4042406	4042429	.	-	.	ID=id4569;Dbxref=GeneID:1099097;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=clpB
NC_003888.3	RefSeq	ribosome_entry_site	4043055	4043060	.	-	.	ID=id4570;gbkey=RBS
NC_003888.3	RefSeq	gene	4043330	4043665	.	-	.	ID=gene3688;Dbxref=GeneID:1099098;Name=SCH44.02c;gbkey=Gene;gene=SCH44.02c;gene_biotype=protein_coding;gene_synonym=SCH44.02c;locus_tag=SCO3662
NC_003888.3	RefSeq	CDS	4043330	4043665	.	-	0	ID=cds3617;Parent=gene3688;Dbxref=Genbank:NP_627855.1,GeneID:1099098;Name=NP_627855.1;Note=SCH44.02c%2C unknown%2C len: 111 aa;gbkey=CDS;gene=SCH44.02c;product=hypothetical protein;protein_id=NP_627855.1;transl_table=11
NC_003888.3	RefSeq	gene	4043667	4043858	.	-	.	ID=gene3689;Dbxref=GeneID:1099099;Name=SCH44.03c;gbkey=Gene;gene=SCH44.03c;gene_biotype=protein_coding;gene_synonym=SCH44.03c;locus_tag=SCO3663
NC_003888.3	RefSeq	CDS	4043667	4043858	.	-	0	ID=cds3618;Parent=gene3689;Dbxref=Genbank:NP_627856.1,GeneID:1099099;Name=NP_627856.1;Note=SCH44.03c%2C possible membrane protein%2C len: 63 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH44.03c;product=hypothetical protein;protein_id=NP_627856.1;transl_table=11
NC_003888.3	RefSeq	gene	4043991	4045001	.	+	.	ID=gene3690;Dbxref=GeneID:1099100;Name=SCH44.04;gbkey=Gene;gene=SCH44.04;gene_biotype=protein_coding;gene_synonym=SCH44.04;locus_tag=SCO3664
NC_003888.3	RefSeq	CDS	4043991	4045001	.	+	0	ID=cds3619;Parent=gene3690;Dbxref=Genbank:NP_627857.1,GeneID:1099100;Name=NP_627857.1;Note=SCH44.04%2C possible regulatory protein%2C len: 336 aa%3B similar to TR:Q56084 (EMBL:D63904) Streptomyces thermoviolaceus ESA36 (erythropoiesis-stimulating activity)%2C 344 aa%3B fasta scores: opt: 339 z-score: 402.5 E(): 5.9e-15%3B 29.7%25 identity in 286 aa overlap and to Streptomyces coelicolor SCH44.05 aa%3B fasta scores: opt: 973 z-score: 1035.9 E(): 0%3B 48.0%25 identity in 325 aa overlap and to SCH44.06c%2C 394 aa%3B fasta scores: opt: 952 z-score: 1012.5 E(): 0%3B 48.1%25 identity in 320 aa overlap. Contains possible helix-turn-helix motif at residues 278..299 (+3.88 SD);gbkey=CDS;gene=SCH44.04;product=regulatory protein;protein_id=NP_627857.1;transl_table=11
NC_003888.3	RefSeq	gene	4044998	4045981	.	+	.	ID=gene3691;Dbxref=GeneID:1099101;Name=SCH44.05;gbkey=Gene;gene=SCH44.05;gene_biotype=protein_coding;gene_synonym=SCH44.05;locus_tag=SCO3665
NC_003888.3	RefSeq	CDS	4044998	4045981	.	+	0	ID=cds3620;Parent=gene3691;Dbxref=Genbank:NP_627858.1,GeneID:1099101;Name=NP_627858.1;Note=SCH44.05%2C possible regulatory protein%2C len: 327 aa%3B similar to TR:Q56084 (EMBL:D63904) Streptomyces thermoviolaceus ESA36 (erythropoiesis-stimulating activity)%2C 344 aa%3B fasta scores: opt: 270 z-score: 315.4 E(): 4.2e-10%3B 25.7%25 identity in 296 aa overlap and als to Streptomyces colicolor SCH44.04 336 aa%3B fasta scores: opt: 973 z-score: 954.8 E(): 0%3B 48.0%25 identity in 325 aa overlap and SCH44.06c 394 aa%3B fasta scores: opt: 849 z-score: 833.2 E(): 0%3B 45.2%25 identity in 323 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and possible helix-turn-helix motif at residues 278..299 (+5.13 SD);gbkey=CDS;gene=SCH44.05;product=regulatory protein;protein_id=NP_627858.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4045775	4045972	.	+	.	ID=id4571;Dbxref=GeneID:1099101;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 24.90%2C E-value 0.00013;gbkey=misc_feature;gene=SCH44.05
NC_003888.3	RefSeq	gene	4045944	4047128	.	-	.	ID=gene3692;Dbxref=GeneID:1099102;Name=SCH44.06c;gbkey=Gene;gene=SCH44.06c;gene_biotype=protein_coding;gene_synonym=SCH44.06c;locus_tag=SCO3666
NC_003888.3	RefSeq	CDS	4045944	4047128	.	-	0	ID=cds3621;Parent=gene3692;Dbxref=Genbank:NP_627859.1,GeneID:1099102;Name=NP_627859.1;Note=SCH44.06c%2C possible regulatory protein%2C len: 394 aa%3B similar to TR:Q56084 (EMBL:D63904) Streptomyces thermoviolaceus ESA36 (erythropoiesis-stimulating activity)%2C 344 aa%3B fasta scores: opt: 380 z-score: 432.8 E(): 1.2e-16%3B 31.1%25 identity in 286 aa overlapand to Streptomyces colicolor SCH44.04%2C 336 aa%3B fasta scores: opt: 952 z-score: 855.5 E(): 0%3B 48.1%25 identity in 320 aa overlap and to SCH44.05%2C 327 aa%3B fasta scores: opt: 849 z-score: 764.1 E(): 0%3B 45.2%25 identity in 323 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and possible helix-turn-helix motif at residues 328..349 (+3.19 SD);gbkey=CDS;gene=SCH44.06c;product=regulatory protein;protein_id=NP_627859.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4046004	4046201	.	-	.	ID=id4572;Dbxref=GeneID:1099102;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 29.50%2C E-value 4.3e-05;gbkey=misc_feature;gene=SCH44.06c
NC_003888.3	RefSeq	gene	4047138	4048256	.	-	.	ID=gene3693;Dbxref=GeneID:1099103;Name=SCH44.07c;gbkey=Gene;gene=SCH44.07c;gene_biotype=protein_coding;gene_synonym=SCH44.07c;locus_tag=SCO3667
NC_003888.3	RefSeq	CDS	4047138	4048256	.	-	0	ID=cds3622;Parent=gene3693;Dbxref=Genbank:NP_627860.1,GeneID:1099103;Name=NP_627860.1;Note=SCH44.07c%2C probable  solute-binding protein%2C len: 372 aa%3B similar to TR:O50503 (EMBL:AL009199) Streptomyces coelicolor possible solute-binding protein SC7B7.06%2C 371 aa%3B fasta scores: opt: 1441 z-score: 1539.7 E(): 0%3B 60.6%25 identity in 376 aa overlap and to SW:XYLF_ECOLI (EMBL:U00039) Escherichia coli D-xylose-binding periplasmic protein precursor XylF%2C 330 aa%3B fasta scores: opt: 559 z-score: 602.9 E(): 4.1e-26%3B 34.3%25 identity in 318 aa overlap. Contains Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH44.07c;product=solute-binding protein;protein_id=NP_627860.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4047369	4048133	.	-	.	ID=id4573;Dbxref=GeneID:1099103;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 13.80%2C E-value 2.1e-06;gbkey=misc_feature;gene=SCH44.07c
NC_003888.3	RefSeq	sequence_feature	4048185	4048217	.	-	.	ID=id4574;Dbxref=GeneID:1099103;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCH44.07c
NC_003888.3	RefSeq	sequence_feature	4048245	4052386	.	-	.	ID=id4575;Note=previously sequenced fragment SW:SCDNAK1 EMBL:L46700 Streptomyces coelicolor (strain A3(2)) dnaK operon encoding molecular chaperones (dnaK%2C dnaJ)%2C grpE and hspR genes%2C complete cds's.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4048460	4048915	.	-	.	ID=gene3694;Dbxref=GeneID:1099104;Name=hspR;gbkey=Gene;gene=hspR;gene_biotype=protein_coding;gene_synonym=hspR,SCH44.08c;locus_tag=SCO3668
NC_003888.3	RefSeq	CDS	4048460	4048915	.	-	0	ID=cds3623;Parent=gene3694;Dbxref=Genbank:NP_627861.1,GeneID:1099104;Name=NP_627861.1;Note=SCH44.08c%2C hspR%2C heat shock protein%2C len: 151 aa%3B identical to previously sequenced SW:HSPR_STRCO (EMBL:L46700) Streptomyces coelicolor heat shock protein HspR%2C 151 aa. Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and match to Prosite entry PS00552 Bacterial regulatory proteins%2C merR family signature. Contains also possible colied-coil region at aprox. residues 78..106 and possible helix-turn-helix motif at residues 18..39 (+3.49 SD);gbkey=CDS;gene=hspR;product=heat shock protein;protein_id=NP_627861.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4048751	4048855	.	-	.	ID=id4576;Dbxref=GeneID:1099104;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 29.20%2C E-value 7.3e-05;gbkey=misc_feature;gene=hspR
NC_003888.3	RefSeq	sequence_feature	4048787	4048855	.	-	.	ID=id4577;Dbxref=GeneID:1099104;Note=PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=misc_feature;gene=hspR
NC_003888.3	RefSeq	gene	4048921	4050120	.	-	.	ID=gene3695;Dbxref=GeneID:1099105;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;gene_synonym=dnaJ,SCH44.09c;locus_tag=SCO3669
NC_003888.3	RefSeq	CDS	4048921	4050120	.	-	0	ID=cds3624;Parent=gene3695;Dbxref=Genbank:NP_627862.1,GeneID:1099105;Name=NP_627862.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;gene=dnaJ;product=chaperone protein DnaJ;protein_id=NP_627862.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4048926	4048929	.	-	.	ID=id4578;Dbxref=GeneID:1099105;gbkey=RBS;gene=dnaJ
NC_003888.3	RefSeq	sequence_feature	4048981	4049346	.	-	.	ID=id4579;Dbxref=GeneID:1099105;Note=Pfam match to entry PF01556 DnaJ_C%2C DnaJ C terminal region%2C score 180.50%2C E-value 2.7e-50;gbkey=misc_feature;gene=dnaJ
NC_003888.3	RefSeq	sequence_feature	4049383	4049625	.	-	.	ID=id4580;Dbxref=GeneID:1099105;Note=Pfam match to entry PF00684 DnaJ_CXXCXGXG%2C DnaJ central domain (4 repeats)%2C score 130.20%2C E-value 3.7e-35;gbkey=misc_feature;gene=dnaJ
NC_003888.3	RefSeq	sequence_feature	4049515	4049586	.	-	.	ID=id4581;Dbxref=GeneID:1099105;Note=PS00637 CXXCXGXG dnaJ domain signature;gbkey=misc_feature;gene=dnaJ
NC_003888.3	RefSeq	sequence_feature	4049896	4050093	.	-	.	ID=id4582;Dbxref=GeneID:1099105;Note=Pfam match to entry PF00226 DnaJ%2C DnaJ domain%2C score 126.50%2C E-value 4.8e-34;gbkey=misc_feature;gene=dnaJ
NC_003888.3	RefSeq	sequence_feature	4049908	4049967	.	-	.	ID=id4583;Dbxref=GeneID:1099105;Note=PS00636 Nt-dnaJ domain signature;gbkey=misc_feature;gene=dnaJ
NC_003888.3	RefSeq	ribosome_entry_site	4050131	4050137	.	-	.	ID=id4584;gbkey=RBS
NC_003888.3	RefSeq	gene	4050163	4050840	.	-	.	ID=gene3696;Dbxref=GeneID:1099106;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;gene_synonym=grpE,SCH44.10c;locus_tag=SCO3670
NC_003888.3	RefSeq	CDS	4050163	4050840	.	-	0	ID=cds3625;Parent=gene3696;Dbxref=Genbank:NP_627863.1,GeneID:1099106;Name=NP_627863.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;gene=grpE;product=heat shock protein GrpE;protein_id=NP_627863.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4050280	4050735	.	-	.	ID=id4585;Dbxref=GeneID:1099106;Note=Pfam match to entry PF01025 GrpE%2C GrpE%2C score 217.20%2C E-value 2.4e-61;gbkey=misc_feature;gene=grpE
NC_003888.3	RefSeq	sequence_feature	4050286	4050417	.	-	.	ID=id4586;Dbxref=GeneID:1099106;Note=PS01071 grpE protein signature;gbkey=misc_feature;gene=grpE
NC_003888.3	RefSeq	gene	4050837	4052693	.	-	.	ID=gene3697;Dbxref=GeneID:1099107;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;gene_synonym=SCH35.53,SCH44.11c;locus_tag=SCO3671
NC_003888.3	RefSeq	CDS	4050837	4052693	.	-	0	ID=cds3626;Parent=gene3697;Dbxref=Genbank:NP_733614.1,GeneID:1099107;Name=NP_733614.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=NP_733614.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4050969	4052384	.	-	.	ID=id4587;Dbxref=GeneID:1099107;Note=Pfam match to entry PF00012 HSP70%2C Hsp70 protein%2C score 928.60%2C E-value 1.7e-275;gbkey=misc_feature;gene=dnaK
NC_003888.3	RefSeq	sequence_feature	4051731	4051775	.	-	.	ID=id4588;Dbxref=GeneID:1099107;Note=PS01036 Heat shock hsp70 proteins family signature 3;gbkey=misc_feature;gene=dnaK
NC_003888.3	RefSeq	sequence_feature	4052157	4052198	.	-	.	ID=id4589;Dbxref=GeneID:1099107;Note=PS00329 Heat shock hsp70 proteins family signature 2;gbkey=misc_feature;gene=dnaK
NC_003888.3	RefSeq	sequence_feature	4052652	4052675	.	-	.	ID=id4590;Dbxref=GeneID:1099107;Note=PS00297 Heat shock hsp70 proteins family signature 1.;gbkey=misc_feature;gene=dnaK
NC_003888.3	RefSeq	gene	4052789	4054024	.	-	.	ID=gene3698;Dbxref=GeneID:1099108;Name=SCH35.52;gbkey=Gene;gene=SCH35.52;gene_biotype=protein_coding;gene_synonym=SCH35.52;locus_tag=SCO3672
NC_003888.3	RefSeq	CDS	4052789	4054024	.	-	0	ID=cds3627;Parent=gene3698;Dbxref=Genbank:NP_627864.1,GeneID:1099108;Name=NP_627864.1;Note=SCH35.52%2C possible cell surface biosynthesis associated protein%2C len: 411 aa%3B previously sequenced therefore almost identical to SW:YDNK_STRCO hypothetical protein from Streptomyces coelicolor (411 aa) fasta scores%3B opt: 2635%2C z-score: 2739.7%2C E(): 0%2C (99.8%25 identity in 411 aa overlap). Also similar to many involved in cell surface biosynthesis e.g. SW:RFE_ECOLI UDP-phosphate alpha-N-acetylglucoaminyltransferase from Escherichia coli (367 aa) fasta scores%3B opt: 185%2C z-score: 200.7%2C E(): 0.00075%2C (25.3%25 identity in 383 aa overlap) and SW:MRAY_BACSU phospho-N-acetylmuramoyl-pentapeptide transferase (324 aa) fasta scores%3B opt: 169%2C z-score: 184.8%2C E(): 0.0058%2C (22.0%25 identity in 309 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH35.52;product=cell surface biosynthesis associated protein;protein_id=NP_627864.1;transl_table=11
NC_003888.3	RefSeq	gene	4054268	4056550	.	+	.	ID=gene3699;Dbxref=GeneID:1099109;Name=SCH35.51c;gbkey=Gene;gene=SCH35.51c;gene_biotype=protein_coding;gene_synonym=SCH35.51c;locus_tag=SCO3673
NC_003888.3	RefSeq	CDS	4054268	4056550	.	+	0	ID=cds3628;Parent=gene3699;Dbxref=Genbank:NP_627865.1,GeneID:1099109;Name=NP_627865.1;Note=SCH35.51c%2C probable iron-sulphur-binding reductase%2C len: 433 aa%3B similar to many eg. TR:P96797 (EMBL:Y09870) heterodisulphide reductase from Methanosarcina barkeri (409 aa) fasta scores%3B opt: 427%2C z-score: 463.9%2C E(): 1.6e-18%2C (28.9%25 identity in 443 aa overlap). Contains 2 Pfam matches to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains and 2 Prosite matches to PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH35.51c;product=iron-sulfur-binding reductase;protein_id=NP_627865.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4055153	4055209	.	+	.	ID=id4591;Dbxref=GeneID:1099109;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 8.30%2C E-value 0.36.;gbkey=misc_feature;gene=SCH35.51c
NC_003888.3	RefSeq	sequence_feature	4055171	4055206	.	+	.	ID=id4592;Dbxref=GeneID:1099109;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=SCH35.51c
NC_003888.3	RefSeq	sequence_feature	4055405	4055500	.	+	.	ID=id4593;Dbxref=GeneID:1099109;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 20.60%2C E-value 9.1e-05.;gbkey=misc_feature;gene=SCH35.51c
NC_003888.3	RefSeq	sequence_feature	4055444	4055479	.	+	.	ID=id4594;Dbxref=GeneID:1099109;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=SCH35.51c
NC_003888.3	RefSeq	gene	4056685	4057986	.	+	.	ID=gene3700;Dbxref=GeneID:1099110;Name=SCH35.50c;gbkey=Gene;gene=SCH35.50c;gene_biotype=protein_coding;gene_synonym=SCH35.50c;locus_tag=SCO3674
NC_003888.3	RefSeq	CDS	4056685	4057986	.	+	0	ID=cds3629;Parent=gene3700;Dbxref=Genbank:NP_627866.1,GeneID:1099110;Name=NP_627866.1;Note=SCH35.50c%2C possible sensor kinase%2C len: 433 aa%3B similar to TR:O06213 (EMBL:Z95388) hypothetical protein from Mycobacterium tuberculosis (384 aa) fasta scores%3B opt: 176%2C z-score: 174.4%2C E(): 0.022%2C (31.0%25 identity in 210 aa overlap) and SW:PKAA_STRCO Ser/Thr protein kinase from Streptomyces coelicolor (543 aa) fasta scores%3B opt: 160%2C z-score: 157.4%2C E(): 0.19%2C (29.4%25 identity in 262 aa overlap). Contains possible N-terminal signal sequence and two Prosite matches to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCH35.50c;product=sensor kinase;protein_id=NP_627866.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4056703	4056735	.	+	.	ID=id4595;Dbxref=GeneID:1099110;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCH35.50c
NC_003888.3	RefSeq	sequence_feature	4056724	4056756	.	+	.	ID=id4596;Dbxref=GeneID:1099110;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCH35.50c
NC_003888.3	RefSeq	gene	4058105	4059337	.	+	.	ID=gene3701;Dbxref=GeneID:1099111;Name=SCH35.49c;gbkey=Gene;gene=SCH35.49c;gene_biotype=protein_coding;gene_synonym=SCH35.49c;locus_tag=SCO3675
NC_003888.3	RefSeq	CDS	4058105	4059337	.	+	0	ID=cds3630;Parent=gene3701;Dbxref=Genbank:NP_627867.1,GeneID:1099111;Name=NP_627867.1;Note=SCH35.49c%2C conserved hypothetical protein%2C len: 410aa%3B Similar to others from Streptomyces coelicolor. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCH35.49c;product=hypothetical protein;protein_id=NP_627867.1;transl_table=11
NC_003888.3	RefSeq	gene	4059415	4060467	.	+	.	ID=gene3702;Dbxref=GeneID:1099112;Name=SCH35.48c;gbkey=Gene;gene=SCH35.48c;gene_biotype=protein_coding;gene_synonym=SCH35.48c;locus_tag=SCO3676
NC_003888.3	RefSeq	CDS	4059415	4060467	.	+	0	ID=cds3631;Parent=gene3702;Dbxref=Genbank:NP_627868.1,GeneID:1099112;Name=NP_627868.1;Note=SCH35.48c%2C possible integral membrane protein%2C len: 350aa%3B Contains possible membrane spanning hydrophobic regions in the C-terminal half and a hydrophobic N-terminal half.;gbkey=CDS;gene=SCH35.48c;product=hypothetical protein;protein_id=NP_627868.1;transl_table=11
NC_003888.3	RefSeq	gene	4060547	4061044	.	-	.	ID=gene3703;Dbxref=GeneID:1099113;Name=SCH35.47;gbkey=Gene;gene=SCH35.47;gene_biotype=protein_coding;gene_synonym=SCH35.47;locus_tag=SCO3677
NC_003888.3	RefSeq	CDS	4060547	4061044	.	-	0	ID=cds3632;Parent=gene3703;Dbxref=Genbank:NP_627869.1,GeneID:1099113;Name=NP_627869.1;Note=SCH35.47%2C possible purine phosphoribosyltransferase%2C len: 165 aa%3B similar to many eg. TR:P74916 (EMBL:D37928) purine phosphoribosyltransferase from Thermus flavus (154 aa) fasta scores%3B opt: 222%2C z-score: 291.9%2C E(): 6.3e-09%2C 931.8%25 identity in 151 aa overlap).;gbkey=CDS;gene=SCH35.47;product=purine phosphoribosyltransferase;protein_id=NP_627869.1;transl_table=11
NC_003888.3	RefSeq	gene	4061079	4061654	.	-	.	ID=gene3704;Dbxref=GeneID:1099114;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;gene_synonym=SCH35.46;locus_tag=SCO3678
NC_003888.3	RefSeq	CDS	4061079	4061654	.	-	0	ID=cds3633;Parent=gene3704;Dbxref=Genbank:NP_627870.1,GeneID:1099114;Name=NP_627870.1;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;gbkey=CDS;gene=dcd;product=deoxycytidine triphosphate deaminase;protein_id=NP_627870.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4061112	4061489	.	-	.	ID=id4597;Dbxref=GeneID:1099114;Note=Pfam match to entry PF00692 dUTPase%2C dUTPase%2C score 39.90%2C E-value 5.8e-08.;gbkey=misc_feature;gene=dcd
NC_003888.3	RefSeq	sequence_feature	4061349	4061372	.	-	.	ID=id4598;Dbxref=GeneID:1099114;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dcd
NC_003888.3	RefSeq	gene	4062164	4062237	.	+	.	ID=gene3705;Dbxref=GeneID:3240033;Name=SCOt30;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt30
NC_003888.3	RefSeq	tRNA	4062164	4062237	.	+	.	ID=rna43;Parent=gene3705;Dbxref=GeneID:3240033;Note=tRNA Gly anticodon CCC%2C Cove score 80.37;gbkey=tRNA;product=tRNA-Gly
NC_003888.3	RefSeq	exon	4062164	4062237	.	+	.	ID=id4599;Parent=rna43;Dbxref=GeneID:3240033;Note=tRNA Gly anticodon CCC%2C Cove score 80.37;gbkey=tRNA;product=tRNA-Gly
NC_003888.3	RefSeq	gene	4062587	4064491	.	+	.	ID=gene3706;Dbxref=GeneID:1099115;Name=SCH35.45c;gbkey=Gene;gene=SCH35.45c;gene_biotype=protein_coding;gene_synonym=SCH35.45c;locus_tag=SCO3679
NC_003888.3	RefSeq	CDS	4062587	4064491	.	+	0	ID=cds3634;Parent=gene3706;Dbxref=Genbank:NP_627871.1,GeneID:1099115;Name=NP_627871.1;Note=SCH35.45c%2C unknown%2C len: 634 aa%3B similar to TR:CAA22732 (EMBL:AL035161) hypothetical protein from Streptomyces coelicolor (860 aa) fasta scores%3B opt: 551%2C z-score: 565.3%2C E(): 3.7e-24%2C (29.7%25 identity in 683 aa overlap). Contains Pfam match to entry PF00989 PAS%2C PAS domain.;gbkey=CDS;gene=SCH35.45c;product=hypothetical protein;protein_id=NP_627871.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4062815	4063012	.	+	.	ID=id4600;Dbxref=GeneID:1099115;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 29.80%2C E-value 6.5e-05.;gbkey=misc_feature;gene=SCH35.45c
NC_003888.3	RefSeq	gene	4064575	4064868	.	-	.	ID=gene3707;Dbxref=GeneID:1099116;Name=SCH35.44;gbkey=Gene;gene=SCH35.44;gene_biotype=protein_coding;gene_synonym=SCH35.44;locus_tag=SCO3680
NC_003888.3	RefSeq	CDS	4064575	4064868	.	-	0	ID=cds3635;Parent=gene3707;Dbxref=Genbank:NP_627872.1,GeneID:1099116;Name=NP_627872.1;Note=SCH35.44%2C unknown%2C len: 97aa;gbkey=CDS;gene=SCH35.44;product=hypothetical protein;protein_id=NP_627872.1;transl_table=11
NC_003888.3	RefSeq	gene	4064888	4065388	.	+	.	ID=gene3708;Dbxref=GeneID:1099117;Name=SCH35.43c;gbkey=Gene;gene=SCH35.43c;gene_biotype=protein_coding;gene_synonym=SCH35.43c;locus_tag=SCO3681
NC_003888.3	RefSeq	CDS	4064888	4065388	.	+	0	ID=cds3636;Parent=gene3708;Dbxref=Genbank:NP_627873.1,GeneID:1099117;Name=NP_627873.1;Note=SCH35.43c%2C unknown%2C len: 166aa%3B similar to TR:Q9X8W6 (EMBL:AL078610) SCH35.40 hypothetical protein from Streptomyces coelicolor.;gbkey=CDS;gene=SCH35.43c;product=hypothetical protein;protein_id=NP_627873.1;transl_table=11
NC_003888.3	RefSeq	gene	4065489	4066526	.	+	.	ID=gene3709;Dbxref=GeneID:1099118;Name=SCH35.42c;gbkey=Gene;gene=SCH35.42c;gene_biotype=protein_coding;gene_synonym=SCH35.42c;locus_tag=SCO3682
NC_003888.3	RefSeq	CDS	4065489	4066526	.	+	0	ID=cds3637;Parent=gene3709;Dbxref=Genbank:NP_627874.1,GeneID:1099118;Name=NP_627874.1;Note=SCH35.42c%2C possible delta fatty acid desaturase%2C len: 345 aa%3B similar to many (prokaryote and eukaryote) egs. TR:CAA11032 (EMBL:AJ222980) delta6-acyl-group desaturase from Physcomitrella patens (moss) (525 aa) fasta scores%3B opt: 499%2C z-score: 601.5%2C E(): 3.6e-26%2C (29.5%25 identity in 329 aa overlap) and TR:Q55240 (EMBL:D13780) omega 3 desaturase from Synechocystis sp. strain PCC6803 (359 aa) fasta scores%3B opt: 207%2C z-score: 253.0%2C E(): 9.1e-07%2C (22.6%25 identity in 283 aa overlap). Contains TTA leucine codon%2C possible target for bldA regulation. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH35.42c;product=delta fatty acid desaturase;protein_id=NP_627874.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4065603	4065605	.	+	.	ID=id4601;Dbxref=GeneID:1099118;Note=TTA leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCH35.42c
NC_003888.3	RefSeq	gene	4066523	4066798	.	-	.	ID=gene3710;Dbxref=GeneID:1099119;Name=SCH35.41;gbkey=Gene;gene=SCH35.41;gene_biotype=protein_coding;gene_synonym=SCH35.41;locus_tag=SCO3683
NC_003888.3	RefSeq	CDS	4066523	4066798	.	-	0	ID=cds3638;Parent=gene3710;Dbxref=Genbank:NP_627875.1,GeneID:1099119;Name=NP_627875.1;Note=SCH35.41%2C membrane protein%2C len: 91 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH35.41;product=hypothetical protein;protein_id=NP_627875.1;transl_table=11
NC_003888.3	RefSeq	gene	4066804	4067394	.	-	.	ID=gene3711;Dbxref=GeneID:1099120;Name=SCH35.40;gbkey=Gene;gene=SCH35.40;gene_biotype=protein_coding;gene_synonym=SCH35.40;locus_tag=SCO3684
NC_003888.3	RefSeq	CDS	4066804	4067394	.	-	0	ID=cds3639;Parent=gene3711;Dbxref=Genbank:NP_627876.1,GeneID:1099120;Name=NP_627876.1;Note=SCH35.40%2C unknown%2C len: 196aa%3B similar to neighbouring gene SCH35.39c.;gbkey=CDS;gene=SCH35.40;product=hypothetical protein;protein_id=NP_627876.1;transl_table=11
NC_003888.3	RefSeq	gene	4067767	4068168	.	+	.	ID=gene3712;Dbxref=GeneID:1099121;Name=SCH35.39c;gbkey=Gene;gene=SCH35.39c;gene_biotype=protein_coding;gene_synonym=SCH35.39c;locus_tag=SCO3685
NC_003888.3	RefSeq	CDS	4067767	4068168	.	+	0	ID=cds3640;Parent=gene3712;Dbxref=Genbank:NP_627877.1,GeneID:1099121;Name=NP_627877.1;Note=SCH35.39c%2C unknown%2C len: 133aa%3B similar to TR:Q9X8W6 (EMBL:AL078610) SCH35.40 hypothetical protein (196 aa) fasta scores%3B 47.794%25 identity (50.000%25 ungapped) in 136 aa overlap .;gbkey=CDS;gene=SCH35.39c;product=hypothetical protein;protein_id=NP_627877.1;transl_table=11
NC_003888.3	RefSeq	gene	4068136	4068669	.	-	.	ID=gene3713;Dbxref=GeneID:1099122;Name=SCH35.38;gbkey=Gene;gene=SCH35.38;gene_biotype=protein_coding;gene_synonym=SCH35.38;locus_tag=SCO3686
NC_003888.3	RefSeq	CDS	4068136	4068669	.	-	0	ID=cds3641;Parent=gene3713;Dbxref=Genbank:NP_627878.1,GeneID:1099122;Name=NP_627878.1;Note=SCH35.38%2C unknown%2C len: 177aa;gbkey=CDS;gene=SCH35.38;product=hypothetical protein;protein_id=NP_627878.1;transl_table=11
NC_003888.3	RefSeq	gene	4069088	4069687	.	+	.	ID=gene3714;Dbxref=GeneID:1099123;Name=SCH35.37c;gbkey=Gene;gene=SCH35.37c;gene_biotype=protein_coding;gene_synonym=SCH35.37c;locus_tag=SCO3687
NC_003888.3	RefSeq	CDS	4069088	4069687	.	+	0	ID=cds3642;Parent=gene3714;Dbxref=Genbank:NP_627879.1,GeneID:1099123;Name=NP_627879.1;Note=SCH35.37c%2C unknown%2C len: 199aa%3B N-terminal region alanine-rich%2C C-terminal region glutamic acid-rich. Similar to TR:CAA22040 (EMBL:AL033505) hypothetical protein from Streptomyces coelicolor (239 aa) fasta scores%3B opt: 205%2C z-score: 204.5%2C E(): 0.00046%2C (36.1%25 identity in 202 aa overlap).;gbkey=CDS;gene=SCH35.37c;product=hypothetical protein;protein_id=NP_627879.1;transl_table=11
NC_003888.3	RefSeq	gene	4069691	4070653	.	+	.	ID=gene3715;Dbxref=GeneID:1099124;Name=SCH35.36c;gbkey=Gene;gene=SCH35.36c;gene_biotype=protein_coding;gene_synonym=SCH35.36c;locus_tag=SCO3688
NC_003888.3	RefSeq	CDS	4069691	4070653	.	+	0	ID=cds3643;Parent=gene3715;Dbxref=Genbank:NP_627880.1,GeneID:1099124;Name=NP_627880.1;Note=SCH35.36c%2C hypothetical protein%2C len: 320 aa%3B glutamic acid rich%2C similar to TR:CAA22041 (EMBL:AL033505) hypothetical protein from Streptomyces coelicolor (376 aa) fasta scores%3B opt: 1014%2C z-score: 1002.4%2C E(): 0%2C (51.1%25 identity in 323 aa overlap);gbkey=CDS;gene=SCH35.36c;product=hypothetical protein;protein_id=NP_627880.1;transl_table=11
NC_003888.3	RefSeq	gene	4071163	4071573	.	-	.	ID=gene3716;Dbxref=GeneID:1099125;Name=SCH35.35;gbkey=Gene;gene=SCH35.35;gene_biotype=protein_coding;gene_synonym=SCH35.35;locus_tag=SCO3689
NC_003888.3	RefSeq	CDS	4071163	4071573	.	-	0	ID=cds3644;Parent=gene3716;Dbxref=Genbank:NP_627881.1,GeneID:1099125;Name=NP_627881.1;Note=SCH35.35%2C unknown%2C len: 136aa%3B predicted based upon amino acid and codon usage.;gbkey=CDS;gene=SCH35.35;product=hypothetical protein;protein_id=NP_627881.1;transl_table=11
NC_003888.3	RefSeq	gene	4071572	4072381	.	+	.	ID=gene3717;Dbxref=GeneID:1099126;Name=SCH35.34c;gbkey=Gene;gene=SCH35.34c;gene_biotype=protein_coding;gene_synonym=SCH35.34c;locus_tag=SCO3690
NC_003888.3	RefSeq	CDS	4071572	4072381	.	+	0	ID=cds3645;Parent=gene3717;Dbxref=Genbank:NP_627882.1,GeneID:1099126;Name=NP_627882.1;Note=SCH35.34c%2C possible hydrolase%2C len: 269 aa%3B similar to TR: O07015 (EMBL:Z94043) hypothetical protein from Bacillus subtilis (269 aa) fasta scores%3B opt: 907%2C z-score: 1096.7%2C E(): 0%2C (47.7%25 identity in 262 aa overlap). Also weakly similar to TR:BAA34263 (EMBL:AB014348) 2-hydroxy-6-oxo-6-phenylehexa-2%2C4-dienoate hydrolase from Rhodococcus erythropolis TA421 (297 aa) fasta scores%3B opt: 227%2C z-score: 278.9%2C E(): 3.3e-08%2C (27.1%25 identity in 277 aa overlap). Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SCH35.34c;product=hydrolase;protein_id=NP_627882.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4071701	4072366	.	+	.	ID=id4602;Dbxref=GeneID:1099126;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 75.50%2C E-value 1.1e-18.;gbkey=misc_feature;gene=SCH35.34c
NC_003888.3	RefSeq	gene	4072381	4073649	.	+	.	ID=gene3718;Dbxref=GeneID:1099127;Name=SCH35.33c;gbkey=Gene;gene=SCH35.33c;gene_biotype=protein_coding;gene_synonym=SCH35.33c;locus_tag=SCO3691
NC_003888.3	RefSeq	CDS	4072381	4073649	.	+	0	ID=cds3646;Parent=gene3718;Dbxref=Genbank:NP_627883.1,GeneID:1099127;Name=NP_627883.1;Note=SCH35.33c%2C possible regulatory protein%2C len: 422 aa%3B regions of similarity to many egs. TR:O86807 (EMBL:AL031031)  regulatory protein from Streptomyces coelicolor (916 aa) fasta scores%3B opt: 541%2C z-score: 629.7%2C E(): 9.6e-28%2C (35.5%25 identity in 349 aa overlap) SW:RSBU_BACSU sigma factor associated regulatory protein from Bacillus subtilis (335 aa) fasta scores%3B opt: 214%2C z-score: 253.9%2C E(): 8.2e-07%2C (26.8%25 identity in 228 aa overlap). Contains probable coiled-coil region at approx. 150-165aa.;gbkey=CDS;gene=SCH35.33c;product=regulatory protein;protein_id=NP_627883.1;transl_table=11
NC_003888.3	RefSeq	gene	4073646	4074005	.	+	.	ID=gene3719;Dbxref=GeneID:1099128;Name=SCH35.32c;gbkey=Gene;gene=SCH35.32c;gene_biotype=protein_coding;gene_synonym=SCH35.32c;locus_tag=SCO3692
NC_003888.3	RefSeq	CDS	4073646	4074005	.	+	0	ID=cds3647;Parent=gene3719;Dbxref=Genbank:NP_627884.1,GeneID:1099128;Name=NP_627884.1;Note=SCH35.32c%2C possible anti-sigma factor antagonist%2C len: 119aa%3B similar to many egs. TR:CAB38486 (EMBL:AL035636) anti-sigma factor antagonist from Streptomyces coelicolor (113 aa) fasta scores%3B opt: 218%2C z-score: 288.7%2C E(): 9.4e-09%2C (34.9%25 identity in 109 aa overlap) and SW:SP21_BACSU anti-sigma F factor antagonist from Bacillus subtilis (116 aa) fasta scores%3B opt: 152%2C z-score: 206.5%2C E(): 0.00036%2C (30.9%25 identity in 94 aa overlap).;gbkey=CDS;gene=SCH35.32c;product=anti-sigma factor antagonist;protein_id=NP_627884.1;transl_table=11
NC_003888.3	RefSeq	gene	4074209	4074751	.	+	.	ID=gene3720;Dbxref=GeneID:1099129;Name=SCH35.31c;gbkey=Gene;gene=SCH35.31c;gene_biotype=protein_coding;gene_synonym=SCH35.31c;locus_tag=SCO3693
NC_003888.3	RefSeq	CDS	4074209	4074751	.	+	0	ID=cds3648;Parent=gene3720;Dbxref=Genbank:NP_627885.1,GeneID:1099129;Name=NP_627885.1;Note=SCH35.31c%2C unknown%2C len: 180aa%3B similar to TR:O33344 (EMBL:AL008883) hypothetical protein from Mycobacterium tuberculosis (194 aa) fasta scores%3B opt: 266%2C z-score: 329.4%2C E(): 5.1e-11%2C (34.6%25 identity in 179 aa overlap). Contains TTA codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SCH35.31c;product=hypothetical protein;protein_id=NP_627885.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4074218	4074220	.	+	.	ID=id4603;Dbxref=GeneID:1099129;Note=TTA codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SCH35.31c
NC_003888.3	RefSeq	gene	4074756	4075130	.	-	.	ID=gene3721;Dbxref=GeneID:1099130;Name=SCH35.30;gbkey=Gene;gene=SCH35.30;gene_biotype=protein_coding;gene_synonym=SCH35.30;locus_tag=SCO3694
NC_003888.3	RefSeq	CDS	4074756	4075130	.	-	0	ID=cds3649;Parent=gene3721;Dbxref=Genbank:NP_627886.1,GeneID:1099130;Name=NP_627886.1;Note=SCH35.30%2C possible transcriptional regulator%2C len: 124aa%3B similar to many eg. TR:CAA09641 (EMBL:AJ011500) transcriptional regulator from Streptomyces violaceoruber (196 aa) fasta scores%3B opt: 206%2C z-score: 269.5%2C E(): 1.1e-07%2C (31.2%25 identity in 109 aa overlap). Contains probable helix-turn-helix at 2-23aa (+3.36 SD);gbkey=CDS;gene=SCH35.30;product=transcriptional regulator;protein_id=NP_627886.1;transl_table=11
NC_003888.3	RefSeq	gene	4075117	4075605	.	-	.	ID=gene3722;Dbxref=GeneID:1099131;Name=SCH35.29;gbkey=Gene;gene=SCH35.29;gene_biotype=protein_coding;gene_synonym=SCH35.29;locus_tag=SCO3695
NC_003888.3	RefSeq	CDS	4075117	4075605	.	-	0	ID=cds3650;Parent=gene3722;Dbxref=Genbank:NP_627887.1,GeneID:1099131;Name=NP_627887.1;Note=SCH35.29%2C possible hypothetical protein%2C len: 162aa%3B contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCH35.29;product=hypothetical protein;protein_id=NP_627887.1;transl_table=11
NC_003888.3	RefSeq	gene	4075938	4076306	.	+	.	ID=gene3723;Dbxref=GeneID:1099132;Name=SCH35.28c;gbkey=Gene;gene=SCH35.28c;gene_biotype=protein_coding;gene_synonym=SCH35.28c;locus_tag=SCO3696
NC_003888.3	RefSeq	CDS	4075938	4076306	.	+	0	ID=cds3651;Parent=gene3723;Dbxref=Genbank:NP_627888.1,GeneID:1099132;Name=NP_627888.1;Note=SCH35.28c%2C probable transcriptional regulator%2C len: 122aa%3B similar to many egs. TR:P71941 (EMBL:Z80225) transcriptional regulator from Mycobacterium tuberculosis (126 aa) fasta scores%3B opt: 390%2C z-score: 503.7%2C E(): 1e-20%2C (56.6%25 identity in 122 aa overlap) and SW:ARSR_ECOLI arsenical resistance operon repressor from Escherichia coli (117 aa) fasta scores%3B opt: 198%2C z-score: 263.7%2C E(): 2.3e-07%2C (38.8%25 identity in 80 aa overlap). Contains Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=SCH35.28c;product=transcriptional regulator;protein_id=NP_627888.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4076064	4076303	.	+	.	ID=id4604;Dbxref=GeneID:1099132;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 90.90%2C E-value 2.6e-23.;gbkey=misc_feature;gene=SCH35.28c
NC_003888.3	RefSeq	gene	4076249	4077469	.	-	.	ID=gene3724;Dbxref=GeneID:1099133;Name=SCH35.27;gbkey=Gene;gene=SCH35.27;gene_biotype=protein_coding;gene_synonym=SCH35.27;locus_tag=SCO3697
NC_003888.3	RefSeq	CDS	4076249	4077469	.	-	0	ID=cds3652;Parent=gene3724;Dbxref=Genbank:NP_627889.1,GeneID:1099133;Name=NP_627889.1;Note=SCH35.27%2C possible oxidoreductase%2C len: 406aa%3B similar to many hypothetical proteins eg. TR:O07085 (EMBL:U93876) from Bacillus subtilis (345 aa) fasta scores%3B opt: 388%2C z-score: 307.0%2C E(): 9e-10%2C (34.1%25 identity in 179 aa overlap). Also similar to SW:AHPF_SALTY Alkyl hydroperoxide reductase subunit from Salmonella typhimurium (521 aa) fasta scores%3B opt: 222%2C z-score: 180.7%2C E(): 0.0097%2C (30.8%25 identity in 201 aa overlap). NB. Overlaps downstream CDS.;gbkey=CDS;gene=SCH35.27;product=oxidoreductase;protein_id=NP_627889.1;transl_table=11
NC_003888.3	RefSeq	gene	4077583	4078692	.	-	.	ID=gene3725;Dbxref=GeneID:1099134;Name=SCH35.26;gbkey=Gene;gene=SCH35.26;gene_biotype=protein_coding;gene_synonym=SCH35.26;locus_tag=SCO3698
NC_003888.3	RefSeq	CDS	4077583	4078692	.	-	0	ID=cds3653;Parent=gene3725;Dbxref=Genbank:NP_627890.1,GeneID:1099134;Name=NP_627890.1;Note=SCH35.26%2C possible heavy metal resistance membrane protein%2C len: 369aa%3B similar to many hypothetical proteins eg. TR:P71942 (EMBL:Z80225) from Mycobacterium tuberculosis (498 aa) fasta scores%3B opt: 1731%2C z-score: 2029.9%2C E(): 0%2C (73.8%25 identity in 362 aa overlap). Also similar to SW:ACR3_YEAST arsenical resistance protein from Saccharomyces cerevisiae (yeast) (404 aa) fasta scores%3B opt: 562%2C z-score: 662.8%2C E(): 1.4e-29%2C (33.1%25 identity in 375 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCH35.26;product=heavy metal resistance membrane protein;protein_id=NP_627890.1;transl_table=11
NC_003888.3	RefSeq	gene	4078689	4078997	.	-	.	ID=gene3726;Dbxref=GeneID:1099135;Name=SCH35.25;gbkey=Gene;gene=SCH35.25;gene_biotype=protein_coding;gene_synonym=SCH35.25;locus_tag=SCO3699
NC_003888.3	RefSeq	CDS	4078689	4078997	.	-	0	ID=cds3654;Parent=gene3726;Dbxref=Genbank:NP_627891.1,GeneID:1099135;Name=NP_627891.1;Note=SCH35.25%2C probable transcriptional regulator%2C len: 102aa%3B similar to many eg. SW:ARSR_ECOLI arsenical resistance operon from Escherichia coli (117 aa) fasta scores%3B opt: 147%2C z-score: 212.9%2C E(): 0.00016%2C (36.6%25 identity in 71 aa overlap). Contains Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=SCH35.25;product=transcriptional regulator;protein_id=NP_627891.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4078737	4078970	.	-	.	ID=id4605;Dbxref=GeneID:1099135;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 47.70%2C E-value 2.7e-10.;gbkey=misc_feature;gene=SCH35.25
NC_003888.3	RefSeq	gene	4079089	4079502	.	+	.	ID=gene3727;Dbxref=GeneID:1099136;Name=SCH35.24c;gbkey=Gene;gene=SCH35.24c;gene_biotype=protein_coding;gene_synonym=SCH35.24c;locus_tag=SCO3700
NC_003888.3	RefSeq	CDS	4079089	4079502	.	+	0	ID=cds3655;Parent=gene3727;Dbxref=Genbank:NP_627892.1,GeneID:1099136;Name=NP_627892.1;Note=SCH35.24c%2C possible heavy metal reductase%2C len: 137aa%3B similar to many arsenate reductases eg. SW:ARSC_STAAU ArsC%2C arsenate reductase from Staphylococcus aureus (131 aa) fasta scores%3B opt: 311%2C z-score: 363.4%2C E(): 6.5e-13%2C (38.6%25 identity in 127 aa overlap). Also similar to the C-terminus of TR:P71942 (EMBL:Z80225) hypothetical protein from Mycobacterium tuberculosis (498 aa) fasta scores%3B opt: 567%2C z-score: 641.0%2C E(): 2.2e-28%2C (65.1%25 identity in 129 aa overlap).;gbkey=CDS;gene=SCH35.24c;product=heavy metal reductase;protein_id=NP_627892.1;transl_table=11
NC_003888.3	RefSeq	gene	4079499	4079729	.	+	.	ID=gene3728;Dbxref=GeneID:1099137;Name=SCH35.23c;gbkey=Gene;gene=SCH35.23c;gene_biotype=protein_coding;gene_synonym=SCH35.23c;locus_tag=SCO3701
NC_003888.3	RefSeq	CDS	4079499	4079729	.	+	0	ID=cds3656;Parent=gene3728;Dbxref=Genbank:NP_627893.1,GeneID:1099137;Name=NP_627893.1;Note=SCH35.23c%2C unknown%2C len: 76aa%3B similar to the N-terminus of many thioredoxin reductases from prokaryotes and eukaryotes egs. SW:TRXB_STRCO TrxB%2C thioredoxin reductase from Streptomyces coelicolor (319 aa) fasta scores%3B opt: 215%2C z-score: 280.7%2C E(): 2.6e-08%2C (63.2%25 identity in 57 aa overlap) and SW:TRXB_NEUCR Cys-9 thioredoxin reductase from Neurospora crassa (334 aa) fasta scores%3B opt: 158%2C z-score: 209.4%2C E(): 0.00025%2C (51.8%25 identity in 56 aa overlap).;gbkey=CDS;gene=SCH35.23c;product=hypothetical protein;protein_id=NP_627893.1;transl_table=11
NC_003888.3	RefSeq	gene	4079863	4080510	.	+	.	ID=gene3729;Dbxref=GeneID:1099138;Name=SCH35.22c;gbkey=Gene;gene=SCH35.22c;gene_biotype=protein_coding;gene_synonym=SCH35.22c;locus_tag=SCO3702
NC_003888.3	RefSeq	CDS	4079863	4080510	.	+	0	ID=cds3657;Parent=gene3729;Dbxref=Genbank:NP_627894.1,GeneID:1099138;Name=NP_627894.1;Note=SCH35.22c%2C possible DNA-binding protein%2C len: 215aa%3B similar to TR:Q51078 (EMBL:Z21683) hypothetical DNA-binding protein from Streptomyces lactamdurans (214 aa) fasta scores%3B opt: 1210%2C z-score: 1460.4%2C E(): 0%2C 77.2%25 identity in 215 aa overlap;gbkey=CDS;gene=SCH35.22c;product=DNA-binding protein;protein_id=NP_627894.1;transl_table=11
NC_003888.3	RefSeq	gene	4080650	4081045	.	+	.	ID=gene3730;Dbxref=GeneID:1099139;Name=SCH35.21c;gbkey=Gene;gene=SCH35.21c;gene_biotype=protein_coding;gene_synonym=SCH35.21c;locus_tag=SCO3703
NC_003888.3	RefSeq	CDS	4080650	4081045	.	+	0	ID=cds3658;Parent=gene3730;Dbxref=Genbank:NP_627895.1,GeneID:1099139;Name=NP_627895.1;Note=SCH35.21c%2C possible substrate binding protein%2C len: 131aa%3B similar to many eg. SW:MOP2_CLOPA molybdenum-pterin binding protein from Clostridium pasteurianum (68 aa) fasta scores%3B opt: 150%2C z-score: 204.%2C1 E(): 0.00048%2C (42.9%25 identity in 63 aa overlap). Contains probable helix-turn-helix at 5-26aa (+5.01 SD).;gbkey=CDS;gene=SCH35.21c;product=substrate binding protein;protein_id=NP_627895.1;transl_table=11
NC_003888.3	RefSeq	gene	4081222	4082031	.	+	.	ID=gene3731;Dbxref=GeneID:1099140;Name=SCH35.20c;gbkey=Gene;gene=SCH35.20c;gene_biotype=protein_coding;gene_synonym=SCH35.20c;locus_tag=SCO3704
NC_003888.3	RefSeq	CDS	4081222	4082031	.	+	0	ID=cds3659;Parent=gene3731;Dbxref=Genbank:NP_627896.1,GeneID:1099140;Name=NP_627896.1;Note=SCH35.20c%2C possible substrate-binding transport protein%2C len: 269aa%3B similar to many egs. TR:O31229 (EMBL:Y10817) molybdate-binding periplasmic transport protein from Arthrobacter nicotinovorans (260 aa) fasta scores%3B opt: 613%2C z-score: 670.6%2C E(): 5e-30%2C (43.4%25 identity in 256 aa overlap) and SW:MODA_ECOLI molybdate-binding periplasmic transport protein from Escherichia coli (257 aa) fasta scores%3B opt: 163%2C z-score: 186.1%2C E(): 0.0049%2C (31.7%25 identity in 249 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCH35.20c;product=substrate-binding transport protein;protein_id=NP_627896.1;transl_table=11
NC_003888.3	RefSeq	gene	4082028	4082879	.	+	.	ID=gene3732;Dbxref=GeneID:1099141;Name=SCH35.19c;gbkey=Gene;gene=SCH35.19c;gene_biotype=protein_coding;gene_synonym=SCH35.19c;locus_tag=SCO3705
NC_003888.3	RefSeq	CDS	4082028	4082879	.	+	0	ID=cds3660;Parent=gene3732;Dbxref=Genbank:NP_627897.1,GeneID:1099141;Name=NP_627897.1;Note=SCH35.19c%2C ABC transporter membrane subunit%2C len: 283aa%3B similar to many egs. TR:O31230 (EMBL:Y10817) from Arthrobacter nicotinovorans (239 aa) fasta scores%3B opt: 745%2C z-score: 854.5%2C E(): 0%2C (52.8%25 identity in 229 aa overlap) and SW:MODB_ECOLI molybdate transport permease from Escherichia coli (229 aa) fasta scores%3B opt: 639%2C z-score: 734.6%2C E(): 0%2C (44.7%25 identity in 219 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCH35.19c;product=ABC transporter membrane subunit;protein_id=NP_627897.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4082550	4082780	.	+	.	ID=id4606;Dbxref=GeneID:1099141;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 74.20%2C E-value 2.8e-18.;gbkey=misc_feature;gene=SCH35.19c
NC_003888.3	RefSeq	sequence_feature	4082553	4082639	.	+	.	ID=id4607;Dbxref=GeneID:1099141;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCH35.19c
NC_003888.3	RefSeq	gene	4082876	4084000	.	+	.	ID=gene3733;Dbxref=GeneID:1099142;Name=SCH35.18c;gbkey=Gene;gene=SCH35.18c;gene_biotype=protein_coding;gene_synonym=SCH35.18c;locus_tag=SCO3706
NC_003888.3	RefSeq	CDS	4082876	4084000	.	+	0	ID=cds3661;Parent=gene3733;Dbxref=Genbank:NP_627898.1,GeneID:1099142;Name=NP_627898.1;Note=SCH35.18c%2C probable ABC transporter ATP-binding subunit%2C len: 374aa%3B similar to many egs. TR:O31231 (EMBL:Y10817) from Arthrobacter nicotinovorans (349 aa) fasta scores%3B opt: 816%2C z-score: 875.0%2C E(): 0%2C (43.2%25 identity in 340 aa overlap) and TR:O86751 (EMBL:AL031035) ABC transporter ATP-binding subunit from Streptomyces coelicolor (348 aa) fasta scores%3B opt: 653%2C z-score: 701.9%2C E(): 9e-32%2C (38.6%25 identity in 321 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCH35.18c;product=ABC transporter ATP-binding protein;protein_id=NP_627898.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4083035	4083580	.	+	.	ID=id4608;Dbxref=GeneID:1099142;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 218.80%2C E-value 8.1e-62.;gbkey=misc_feature;gene=SCH35.18c
NC_003888.3	RefSeq	sequence_feature	4083056	4083079	.	+	.	ID=id4609;Dbxref=GeneID:1099142;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCH35.18c
NC_003888.3	RefSeq	sequence_feature	4083350	4083394	.	+	.	ID=id4610;Dbxref=GeneID:1099142;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SCH35.18c
NC_003888.3	RefSeq	gene	4084035	4084604	.	-	.	ID=gene3734;Dbxref=GeneID:1099143;Name=SCH35.17;gbkey=Gene;gene=SCH35.17;gene_biotype=protein_coding;gene_synonym=SCH35.17;locus_tag=SCO3707
NC_003888.3	RefSeq	CDS	4084035	4084604	.	-	0	ID=cds3662;Parent=gene3734;Dbxref=Genbank:NP_627899.1,GeneID:1099143;Name=NP_627899.1;Note=SCH35.17%2C lipoprotein%2C len: 189 aa%3B weakly similar to TR:Q54334 (EMBL:U22894) hypothetical protein from the AUD1 region of Streptomyces lividans 66 (184 aa) fasta scores%3B opt: 127%2C z-score: 144.8%2C E(): 0.98%2C (28.4%25 identity in 162 aa overlap). Also weakly similar to SW:T2D8_HUMAN transcription initiation factor from Homo sapiens (human) (218 aa) fasta scores%3B opt: 152%2C%2C z-score: 169.1 E(): 0.044%2C (32.3%25 identity in 167 aa overlap). Also contains properly situated Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH35.17;product=lipoprotein;protein_id=NP_627899.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4084515	4084547	.	-	.	ID=id4611;Dbxref=GeneID:1099143;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCH35.17
NC_003888.3	RefSeq	gene	4084704	4085324	.	-	.	ID=gene3735;Dbxref=GeneID:1099144;Name=SCH35.16;gbkey=Gene;gene=SCH35.16;gene_biotype=protein_coding;gene_synonym=SCH35.16;locus_tag=SCO3708
NC_003888.3	RefSeq	CDS	4084704	4085324	.	-	0	ID=cds3663;Parent=gene3735;Dbxref=Genbank:NP_627900.1,GeneID:1099144;Name=NP_627900.1;Note=SCH35.16%2C possible integral membrane protein%2C len: 206aa%3B Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCH35.16;product=hypothetical protein;protein_id=NP_627900.1;transl_table=11
NC_003888.3	RefSeq	gene	4085317	4085871	.	-	.	ID=gene3736;Dbxref=GeneID:1099145;Name=SCH35.15;gbkey=Gene;gene=SCH35.15;gene_biotype=protein_coding;gene_synonym=SCH35.15;locus_tag=SCO3709
NC_003888.3	RefSeq	CDS	4085317	4085871	.	-	0	ID=cds3664;Parent=gene3736;Dbxref=Genbank:NP_627901.1,GeneID:1099145;Name=NP_627901.1;Note=SCH35.15%2C possible ECF sigma factor%2C len: 184 aa%3B similar to many e.g. SW:RPOE_STRCO sigma E from Streptomyces coelicolor (176 aa) fasta scores%3B opt: 216%2C z-score: 250.5%2C E(): 1.3e-06%2C (29.2%25 identity in 161 aa overlap).;gbkey=CDS;gene=SCH35.15;product=ECF sigma factor;protein_id=NP_627901.1;transl_table=11
NC_003888.3	RefSeq	gene	4086039	4087673	.	+	.	ID=gene3737;Dbxref=GeneID:1099146;Name=SCH35.14c;gbkey=Gene;gene=SCH35.14c;gene_biotype=protein_coding;gene_synonym=SCH35.14c;locus_tag=SCO3710
NC_003888.3	RefSeq	CDS	4086039	4087673	.	+	0	ID=cds3665;Parent=gene3737;Dbxref=Genbank:NP_627902.1,GeneID:1099146;Name=NP_627902.1;Note=SCH35.14c%2C possible large integral membrane protein%2C len: 544aa%3B Contains possible membrane spanning hydrophobic regions. Region (282-346aa) of similarity to SW:YZ25_MYCTU hypothetical protein from from Mycobacterium tuberculosis (535aa) blast scores: Identities %3D 32/69 (46%25)%2C Positives %3D 37/69 (53%25).;gbkey=CDS;gene=SCH35.14c;product=large integral membrane protein;protein_id=NP_627902.1;transl_table=11
NC_003888.3	RefSeq	gene	4087742	4088053	.	+	.	ID=gene3738;Dbxref=GeneID:1099147;Name=SCH35.13c;gbkey=Gene;gene=SCH35.13c;gene_biotype=protein_coding;gene_synonym=SCH35.13c;locus_tag=SCO3711
NC_003888.3	RefSeq	CDS	4087742	4088053	.	+	0	ID=cds3666;Parent=gene3738;Dbxref=Genbank:NP_627903.1,GeneID:1099147;Name=NP_627903.1;Note=SCH35.13c%2C possible small membrane protein%2C len: 103 aa%3B contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCH35.13c;product=small membrane protein;protein_id=NP_627903.1;transl_table=11
NC_003888.3	RefSeq	gene	4088148	4088984	.	+	.	ID=gene3739;Dbxref=GeneID:1099148;Name=SCH35.12c;gbkey=Gene;gene=SCH35.12c;gene_biotype=protein_coding;gene_synonym=SCH35.12c;locus_tag=SCO3712
NC_003888.3	RefSeq	CDS	4088148	4088984	.	+	0	ID=cds3667;Parent=gene3739;Dbxref=Genbank:NP_627904.1,GeneID:1099148;Name=NP_627904.1;Note=SCH35.12c%2C possible hydrolase%2C len: 278aa%3B similar to many polysaccharide deacetylases from Rhizobia spp. eg. SW:NODB_RHIME chito-oligosaccharide deacetylase from Rhizobium meliloti (217 aa) fasta scores%3B opt: 399%2C z-score: 428.0%2C E(): 1.6e-16%2C (36.9%25 identity in 187 aa overlap).;gbkey=CDS;gene=SCH35.12c;product=hydrolase;protein_id=NP_627904.1;transl_table=11
NC_003888.3	RefSeq	gene	4088998	4089171	.	-	.	ID=gene3740;Dbxref=GeneID:1099149;Name=SCH35.11;gbkey=Gene;gene=SCH35.11;gene_biotype=protein_coding;gene_synonym=SCH35.11;locus_tag=SCO3713
NC_003888.3	RefSeq	CDS	4088998	4089171	.	-	0	ID=cds3668;Parent=gene3740;Dbxref=Genbank:NP_627905.1,GeneID:1099149;Name=NP_627905.1;Note=SCH35.11%2C unknown%2C len: 57aa;gbkey=CDS;gene=SCH35.11;product=hypothetical protein;protein_id=NP_627905.1;transl_table=11
NC_003888.3	RefSeq	gene	4089285	4090508	.	-	.	ID=gene3741;Dbxref=GeneID:1099150;Name=SCH35.10;gbkey=Gene;gene=SCH35.10;gene_biotype=protein_coding;gene_synonym=SCH35.10;locus_tag=SCO3714
NC_003888.3	RefSeq	CDS	4089285	4090508	.	-	0	ID=cds3669;Parent=gene3741;Dbxref=Genbank:NP_627906.1,GeneID:1099150;Name=NP_627906.1;Note=SCH35.10%2C probable transposase%2C len: 407aa%3B similar to many egs. TR:O83029 (EMBL:AB016803) TnpC%2C transposase from Deinococcus radiodurans (408 aa) fasta scores%3B opt: 837%2C z-score: 956.6%2C E(): 0%2C (37.6%25 identity in 399 aa overlap) and TR:P73816 (EMBL:D90909) transposase from Synechocystis sp. PCC6803 (400 aa) fasta scores%3B opt: 1095%2C z-score: 1250.1%2C E(): 0%2C (50.9%25 identity in 381 aa overlap). Contains Pfam match to entry PF01385 Transposase_2%2C Probable transposase.;gbkey=CDS;gene=SCH35.10;product=transposase;protein_id=NP_627906.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4089633	4090280	.	-	.	ID=id4612;Dbxref=GeneID:1099150;Note=Pfam match to entry PF01385 Transposase_2%2C Probable transposase%2C score 235.90%2C E-value 5.6e-67.;gbkey=misc_feature;gene=SCH35.10
NC_003888.3	RefSeq	gene	4090396	4091067	.	-	.	ID=gene3742;Dbxref=GeneID:1099151;Name=SCH35.09;gbkey=Gene;gene=SCH35.09;gene_biotype=protein_coding;gene_synonym=SCH35.09;locus_tag=SCO3715
NC_003888.3	RefSeq	CDS	4090396	4091067	.	-	0	ID=cds3670;Parent=gene3742;Dbxref=Genbank:NP_627907.1,GeneID:1099151;Name=NP_627907.1;Note=SCH35.09%2C possible ECF sigma factor%2C len: 223aa%3B similar to many egs. TR:O53378 (EMBL:AL021841) sigma factor from Mycobacterium tuberculosis (312 aa) fasta scores%3B opt: 357%2C z-score: 418.3%2C E(): 5.7e-16%2C (33.2%25 identity in 226 aa overlap) and SW:RPOE_STRCO sigma factor E from Streptomyces coelicolor (176 aa) fasta scores%3B opt: 131%2C z-score: 162.5%2C E(): 0.1%2C (33.3%25 identity in 114 aa overlap). NB. Overlaps with downstream CDS.;gbkey=CDS;gene=SCH35.09;product=ECF sigma factor;protein_id=NP_627907.1;transl_table=11
NC_003888.3	RefSeq	gene	4091267	4091944	.	-	.	ID=gene3743;Dbxref=GeneID:1099152;Name=SCH35.08;gbkey=Gene;gene=SCH35.08;gene_biotype=protein_coding;gene_synonym=SCH35.08;locus_tag=SCO3716
NC_003888.3	RefSeq	CDS	4091267	4091944	.	-	0	ID=cds3671;Parent=gene3743;Dbxref=Genbank:NP_627908.1,GeneID:1099152;Name=NP_627908.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions%3B the C subunit may be involved in assembly of the KDP complex;gbkey=CDS;gene=SCH35.08;product=potassium-transporting ATPase subunit C;protein_id=NP_627908.1;transl_table=11
NC_003888.3	RefSeq	gene	4091950	4094073	.	-	.	ID=gene3744;Dbxref=GeneID:1099153;Name=SCH35.07;gbkey=Gene;gene=SCH35.07;gene_biotype=protein_coding;gene_synonym=SCH35.07;locus_tag=SCO3717
NC_003888.3	RefSeq	CDS	4091950	4094073	.	-	0	ID=cds3672;Parent=gene3744;Dbxref=Genbank:NP_627909.1,GeneID:1099153;Name=NP_627909.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=SCH35.07;product=potassium-transporting ATPase subunit B;protein_id=NP_627909.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4092127	4093785	.	-	.	ID=id4613;Dbxref=GeneID:1099153;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPases%2C score 453.80%2C E-value 1.4e-132.;gbkey=misc_feature;gene=SCH35.07
NC_003888.3	RefSeq	sequence_feature	4092310	4092348	.	-	.	ID=id4614;Dbxref=GeneID:1099153;Note=PS00018 EF-hand calcium-binding domain.;gbkey=misc_feature;gene=SCH35.07
NC_003888.3	RefSeq	sequence_feature	4093078	4093098	.	-	.	ID=id4615;Dbxref=GeneID:1099153;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;gene=SCH35.07
NC_003888.3	RefSeq	gene	4094070	4095734	.	-	.	ID=gene3745;Dbxref=GeneID:1099154;Name=SCH35.06;gbkey=Gene;gene=SCH35.06;gene_biotype=protein_coding;gene_synonym=SCH35.06;locus_tag=SCO3718
NC_003888.3	RefSeq	CDS	4094070	4095734	.	-	0	ID=cds3673;Parent=gene3745;Dbxref=Genbank:NP_627910.1,GeneID:1099154;Name=NP_627910.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=SCH35.06;product=potassium-transporting ATPase subunit A;protein_id=NP_627910.1;transl_table=11
NC_003888.3	RefSeq	gene	4095742	4095831	.	-	.	ID=gene3746;Dbxref=GeneID:1099155;Name=SCH35.05;gbkey=Gene;gene=SCH35.05;gene_biotype=protein_coding;gene_synonym=SCH35.05;locus_tag=SCO3719
NC_003888.3	RefSeq	CDS	4095742	4095831	.	-	0	ID=cds3674;Parent=gene3746;Dbxref=Genbank:NP_627911.1,GeneID:1099155;Name=NP_627911.1;Note=SCH35.05%2C possible small membrane protein%2C len: 29aa%3B predicted based on amino acid and codon usage methods. Comprised mostly of hydrophobic amino acids. Similar to SW:KDPF_ECOLI predicted membrane protein from the high-affinity potassium-uptake kdpABC operon of Escherichia coli (29 aa) fasta scores%3B opt: 75%2C z-score: 156.3%2C E(): 0.22%2C (44.8%25 identity in 29 aa overlap).;gbkey=CDS;gene=SCH35.05;product=small membrane protein;protein_id=NP_627911.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4095828	4095911	.	-	.	ID=id4616;Note=similar to small membrane protein%3B SCH35.04%2C possible small membrane protein%2C len: 27aa%3B predicted based on amino acid and codon usage methods. Comprised mostly of hydrophobic amino acids.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4096157	4096780	.	-	.	ID=gene3747;Dbxref=GeneID:1099157;Name=SCH35.03;gbkey=Gene;gene=SCH35.03;gene_biotype=protein_coding;gene_synonym=SCH35.03;locus_tag=SCO3721
NC_003888.3	RefSeq	CDS	4096157	4096780	.	-	0	ID=cds3675;Parent=gene3747;Dbxref=Genbank:NP_627913.1,GeneID:1099157;Name=NP_627913.1;Note=SCH35.03%2C probable carbonic anhydrase%2C len: 207aa%3B similar to many (both prokayote and eukaryote) egs. TR:Q39589 (EMBL:U41189) an algal mitochondrial carbonic anhydrase from Chlamydomonas reinhardtii (267 aa) fasta scores%3B opt: 431%2C z-score: 502.8%2C E(): 1.1e-20%2C (37.9%25 identity in 198 aa overlap) and SW:CYNT_ECOLI carbonic anhydrase from Escherichia coli (219 aa) fasta scores%3B opt: 227%2C z-score: 271.0%2C E(): 9.1e-08%2C (30.9%25 identity in 178 aa overlap). Contains Prosite match to PS00704 Prokaryotic-type carbonic anhydrases signature 1 and Pfam match to entry PF00484 Pro_CA%2C Prokaryotic-type carbonic anhydrases.;gbkey=CDS;gene=SCH35.03;product=carbonic anhydrase;protein_id=NP_627913.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4096430	4096663	.	-	.	ID=id4617;Dbxref=GeneID:1099157;Note=Pfam match to entry PF00484 Pro_CA%2C Prokaryotic-type carbonic anhydrases%2C score 47.70%2C E-value 9e-13.;gbkey=misc_feature;gene=SCH35.03
NC_003888.3	RefSeq	sequence_feature	4096598	4096621	.	-	.	ID=id4618;Dbxref=GeneID:1099157;Note=PS00704 Prokaryotic-type carbonic anhydrases signature 1.;gbkey=misc_feature;gene=SCH35.03
NC_003888.3	RefSeq	gene	4096845	4097198	.	-	.	ID=gene3748;Dbxref=GeneID:1099158;Name=SCH35.02;gbkey=Gene;gene=SCH35.02;gene_biotype=protein_coding;gene_synonym=SCH35.02;locus_tag=SCO3722
NC_003888.3	RefSeq	CDS	4096845	4097198	.	-	0	ID=cds3676;Parent=gene3748;Dbxref=Genbank:NP_627914.1,GeneID:1099158;Name=NP_627914.1;Note=SCH35.02%2C possible transcriptional regulator%2C len: 117aa%3B similar to many eg. TR:O53626 (EMBL:AL021428) transcriptional regulator from Mycobacterium tuberculosis (114 aa) fasta scores%3B opt: 404%2C z-score: 526.2%2C E(): 5.6e-22%2C (58.2%25 identity in 110 aa overlap) and SW:NOLR_RHIME NolR negative transacting factor controlling the nod regulon in Rhizobium meliloti (122 aa) fasta scores%3B opt: 175%2C z-score: 237.2%2C E(): 7e-06%2C (35.2%25 identity in 88 aa overlap). Contains Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=SCH35.02;product=transcriptional regulator;protein_id=NP_627914.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4096929	4097162	.	-	.	ID=id4619;Dbxref=GeneID:1099158;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 65.60%2C E-value 1.1e-15.;gbkey=misc_feature;gene=SCH35.02
NC_003888.3	RefSeq	gene	4097454	4098950	.	+	.	ID=gene3749;Dbxref=GeneID:1099159;Name=SCH22A.01;gbkey=Gene;gene=SCH22A.01;gene_biotype=protein_coding;gene_synonym=SCH22A.01,SCH35.01c;locus_tag=SCO3723
NC_003888.3	RefSeq	CDS	4097454	4098950	.	+	0	ID=cds3677;Parent=gene3749;Dbxref=Genbank:NP_733615.1,GeneID:1099159;Name=NP_733615.1;Note=SCH22A.01%2C possible regulatory protein (fragment)%2C len: >465 aa %3B similar to TR:CAB59599 (EMBL:AL132662) Streptomyces coelicolor hypothetical regulatory protein SCF11.22%2C 877 aa%3B fasta scores: opt: 708 z-score: 765.1 E(): 0%3B 34.5%25 identity in 466 aa overlap. Contains Pfam match to entry PF01590 GAF%2C GAF domain and possible coiled-coil region at residues 48..60~SCH35.01c%2C partial CDS%2C unknown%2C len: >76aa;gbkey=CDS;gene=SCH22A.01;product=regulatory protein;protein_id=NP_733615.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4097766	4098203	.	+	.	ID=id4620;Dbxref=GeneID:1099159;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 89.60%2C E-value 6.5e-23;gbkey=misc_feature;gene=SCH22A.01
NC_003888.3	RefSeq	gene	4098986	4099468	.	-	.	ID=gene3750;Dbxref=GeneID:1099160;Name=SCH22A.02c;gbkey=Gene;gene=SCH22A.02c;gene_biotype=protein_coding;gene_synonym=SCH22A.02c;locus_tag=SCO3724
NC_003888.3	RefSeq	CDS	4098986	4099468	.	-	0	ID=cds3678;Parent=gene3750;Dbxref=Genbank:NP_627915.1,GeneID:1099160;Name=NP_627915.1;Note=SCH22A.02c%2C hypothetical protein%2C len: 160 aa%3B similar to TR:Q9X7Q5 (EMBL:AL049587) Streptomyces coelicolor hypothetical 17.1 kD protein SC5F2A.32%2C 161 aa%3B fasta scores: opt: 256 z-score: 310.3 E(): 7.3e-10%3B 39.4%25 identity in 160 aa overlap;gbkey=CDS;gene=SCH22A.02c;product=hypothetical protein;protein_id=NP_627915.1;transl_table=11
NC_003888.3	RefSeq	gene	4099520	4100809	.	-	.	ID=gene3751;Dbxref=GeneID:1099161;Name=SCH22A.03c;gbkey=Gene;gene=SCH22A.03c;gene_biotype=protein_coding;gene_synonym=SCH22A.03c;locus_tag=SCO3725
NC_003888.3	RefSeq	CDS	4099520	4100809	.	-	0	ID=cds3679;Parent=gene3751;Dbxref=Genbank:NP_627916.1,GeneID:1099161;Name=NP_627916.1;Note=SCH22A.03c%2C possible membrane protein%2C len: 429 aa. similar to TR:Q9F388 (EMBL:AL450165) from Streptomyces coelicolor. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.03c;product=hypothetical protein;protein_id=NP_627916.1;transl_table=11
NC_003888.3	RefSeq	gene	4100888	4101508	.	-	.	ID=gene3752;Dbxref=GeneID:1099162;Name=SCH22A.04c;gbkey=Gene;gene=SCH22A.04c;gene_biotype=protein_coding;gene_synonym=SCH22A.04c;locus_tag=SCO3726
NC_003888.3	RefSeq	CDS	4100888	4101508	.	-	0	ID=cds3680;Parent=gene3752;Dbxref=Genbank:NP_627917.1,GeneID:1099162;Name=NP_627917.1;Note=SCH22A.04c%2C unknown%2C len: 206 aa;gbkey=CDS;gene=SCH22A.04c;product=hypothetical protein;protein_id=NP_627917.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4101623	4101629	.	+	.	ID=id4621;gbkey=RBS
NC_003888.3	RefSeq	gene	4101639	4102223	.	+	.	ID=gene3753;Dbxref=GeneID:1099163;Name=SCH22A.05;gbkey=Gene;gene=SCH22A.05;gene_biotype=protein_coding;gene_synonym=SCH22A.05;locus_tag=SCO3727
NC_003888.3	RefSeq	CDS	4101639	4102223	.	+	0	ID=cds3681;Parent=gene3753;Dbxref=Genbank:NP_627918.1,GeneID:1099163;Name=NP_627918.1;Note=SCH22A.05%2C possible stress response protein%2C len: 194 aa%3B similar to TR:AAF11772 (EMBL:AE002055) Deinococcus radiodurans tellurium resistance protein TerZ%2C 195 aa%3B fasta scores: opt: 300 z-score: 364.6 E(): 6.8e-13%3B 31.5%25 identity in 178 aa overlap and to SW:TERZ_SERMA (EMBL:L38824) Serratia marcescens tellurium resistance protein TerZ%2C 193 aa%3B fasta scores: opt: 263 z-score: 321.2 E(): 1.8e-10%3B 28.2%25 identity in 195 aa overlap;gbkey=CDS;gene=SCH22A.05;product=stress response protein;protein_id=NP_627918.1;transl_table=11
NC_003888.3	RefSeq	gene	4102349	4103080	.	-	.	ID=gene3754;Dbxref=GeneID:1099164;Name=SCH22A.06c;gbkey=Gene;gene=SCH22A.06c;gene_biotype=protein_coding;gene_synonym=SCH22A.06c;locus_tag=SCO3728
NC_003888.3	RefSeq	CDS	4102349	4103080	.	-	0	ID=cds3682;Parent=gene3754;Dbxref=Genbank:NP_627919.1,GeneID:1099164;Name=NP_627919.1;Note=SCH22A.06c%2C possible membrane protein%2C len: 243 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.06c;product=hypothetical protein;protein_id=NP_627919.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4103090	4103096	.	-	.	ID=id4622;gbkey=RBS
NC_003888.3	RefSeq	gene	4103188	4103970	.	-	.	ID=gene3755;Dbxref=GeneID:1099165;Name=SCH22A.07c;gbkey=Gene;gene=SCH22A.07c;gene_biotype=protein_coding;gene_synonym=SCH22A.07c;locus_tag=SCO3729
NC_003888.3	RefSeq	CDS	4103188	4103970	.	-	0	ID=cds3683;Parent=gene3755;Dbxref=Genbank:NP_627920.1,GeneID:1099165;Name=NP_627920.1;Note=SCH22A.07c%2C possible regulatory protein%2C len: 260 aa%3B similar to SW:BRPA_STRHY (EMBL:M64783) Streptomyces hygroscopicus bialaphos biosynthetic pathway regulatory protein BrpA%2C 256 aa%3B fasta scores: opt: 267 z-score: 309.8 E(): 7.8e-10%3B 33.8%25 identity in 160 aa overlap. Contains possible helix-turn-helix motif at residues 214..235 (+3.28 SD);gbkey=CDS;gene=SCH22A.07c;product=regulatory protein;protein_id=NP_627920.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4104070	4104101	.	+	.	ID=id4623;Note=degenerate repeat 6x (CGGGCCGC(C/T));gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4104070	4104101	.	-	.	ID=id4624;Note=degenerate repeat 6x (GCCCGGC(G/A));gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	4104192	4104195	.	+	.	ID=id4625;gbkey=RBS
NC_003888.3	RefSeq	gene	4104198	4105055	.	+	.	ID=gene3756;Dbxref=GeneID:1099166;Name=SCH22A.08;gbkey=Gene;gene=SCH22A.08;gene_biotype=protein_coding;gene_synonym=SCH22A.08;locus_tag=SCO3730
NC_003888.3	RefSeq	CDS	4104198	4105055	.	+	0	ID=cds3684;Parent=gene3756;Dbxref=Genbank:NP_627921.1,GeneID:1099166;Name=NP_627921.1;Note=SCH22A.08%2C possible oxidoreductase%2C len: 285 aa%3B similar to TR:Q9X7T6 (EMBL:AL049863) Streptomyces coelicolor oxidoreductase SC5H1.28c%2C 305 aa%3B fasta scores: opt: 778 z-score: 848.8 E(): 0%3B 52.1%25 identity in 288 aa overlap;gbkey=CDS;gene=SCH22A.08;product=oxidoreductase;protein_id=NP_627921.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4105331	4105334	.	+	.	ID=id4626;gbkey=RBS
NC_003888.3	RefSeq	gene	4105340	4105543	.	+	.	ID=gene3757;Dbxref=GeneID:1099167;Name=SCH22A.09;gbkey=Gene;gene=SCH22A.09;gene_biotype=protein_coding;gene_synonym=SCH22A.09,scoF1;locus_tag=SCO3731
NC_003888.3	RefSeq	CDS	4105340	4105543	.	+	0	ID=cds3685;Parent=gene3757;Dbxref=Genbank:NP_627922.1,GeneID:1099167;Name=NP_627922.1;Note=SCH22A.09%2C scoF1%2C cold-shock protein%2C len: 67 aa%3B highly similar to TR:O54117 (EMBL:AL021529) Streptomyces coelicolor cold-shock domain protein SC10A5.26c%2C 67 aa and to SW:CSPF_STRCO (EMBL:X92686) Streptomyces coelicolor cold shock protein ScoF%2C 67 aa. Contains Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain and match to Prosite entry PS00352 'Cold-shock' DNA-binding domain signature;gbkey=CDS;gene=SCH22A.09;product=cold-shock protein;protein_id=NP_627922.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4105340	4105540	.	+	.	ID=id4627;Dbxref=GeneID:1099167;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 139.40%2C E-value 6.2e-38;gbkey=misc_feature;gene=SCH22A.09
NC_003888.3	RefSeq	repeat_region	4105341	4105529	.	-	.	ID=id4628;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4105382	4105441	.	+	.	ID=id4629;Dbxref=GeneID:1099167;Note=PS00352 'Cold-shock' DNA-binding domain signature;gbkey=misc_feature;gene=SCH22A.09
NC_003888.3	RefSeq	gene	4105819	4107405	.	+	.	ID=gene3758;Dbxref=GeneID:1099168;Name=SCH22A.10;gbkey=Gene;gene=SCH22A.10;gene_biotype=protein_coding;gene_synonym=SCH22A.10;locus_tag=SCO3732
NC_003888.3	RefSeq	CDS	4105819	4107405	.	+	0	ID=cds3686;Parent=gene3758;Dbxref=Genbank:NP_627923.1,GeneID:1099168;Name=NP_627923.1;Note=SCH22A.10%2C probable DEAD-box RNA helicase%2C len: 528 aa%3B similar to TR:O54116 (EMBL:AL021529) Streptomyces coelicolor DEAD-box RNA helicase SC10A5.25c%2C 498 aa%3B fasta scores: opt: 2348 z-score: 2252.6 E(): 0%3B 74.9%25 identity in 506 aa overlap and to SW:RHLE_ECOLI (EMBL:L02123) Escherichia coli ATP-dependent RNA helicase RhlE%2C 454 aa%3B fasta scores: opt: 874 z-score: 843.8 E(): 0%3B 36.6%25 identity in 470 aa overlap. Contains two Pfam matches to entries PF00270 DEAD%2C DEAD/DEAH box helicase and PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C and two matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCH22A.10;product=DEAD/DEAH box helicase;protein_id=NP_627923.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4106020	4106640	.	+	.	ID=id4630;Dbxref=GeneID:1099168;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 188.20%2C E-value 1.4e-58;gbkey=misc_feature;gene=SCH22A.10
NC_003888.3	RefSeq	sequence_feature	4106113	4106136	.	+	.	ID=id4631;Dbxref=GeneID:1099168;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH22A.10
NC_003888.3	RefSeq	sequence_feature	4106740	4106985	.	+	.	ID=id4632;Dbxref=GeneID:1099168;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 96.20%2C E-value 6.4e-25;gbkey=misc_feature;gene=SCH22A.10
NC_003888.3	RefSeq	sequence_feature	4106782	4106805	.	+	.	ID=id4633;Dbxref=GeneID:1099168;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH22A.10
NC_003888.3	RefSeq	ribosome_entry_site	4107484	4107488	.	+	.	ID=id4634;gbkey=RBS
NC_003888.3	RefSeq	gene	4107493	4107822	.	+	.	ID=gene3759;Dbxref=GeneID:1099169;Name=SCH22A.11;gbkey=Gene;gene=SCH22A.11;gene_biotype=protein_coding;gene_synonym=SCH22A.11;locus_tag=SCO3733
NC_003888.3	RefSeq	CDS	4107493	4107822	.	+	0	ID=cds3687;Parent=gene3759;Dbxref=Genbank:NP_627924.1,GeneID:1099169;Name=NP_627924.1;Note=SCH22A.11%2C hypothetical protein%2C len: 109 aa%3B similar to TR:O54114 (EMBL:AL021529) Streptomyces coelicolor hypothetical 11.3 kD protein SC10A5.23c%2C 103 aa%3B fasta scores: opt: 483 z-score: 544.6 E(): 6.5e-23%3B 72.0%25 identity in 100 aa overlap;gbkey=CDS;gene=SCH22A.11;product=hypothetical protein;protein_id=NP_627924.1;transl_table=11
NC_003888.3	RefSeq	gene	4107830	4108183	.	-	.	ID=gene3760;Dbxref=GeneID:1099170;Name=SCH22A.12c;gbkey=Gene;gene=SCH22A.12c;gene_biotype=protein_coding;gene_synonym=SCH22A.12c;locus_tag=SCO3734
NC_003888.3	RefSeq	CDS	4107830	4108183	.	-	0	ID=cds3688;Parent=gene3760;Dbxref=Genbank:NP_627925.1,GeneID:1099170;Name=NP_627925.1;Note=SCH22A.12c%2C hypothetical protein%2C len: 117 aa%3B similar to TR:AAF09825 (EMBL:AE001885) Deinococcus radiodurans conserved hypothetical protein DR0242%2C 112 aa%3B fasta scores: opt: 128 z-score: 175.1 E(): 0.025%3B 32.7%25 identity in 110 aa overlap;gbkey=CDS;gene=SCH22A.12c;product=hypothetical protein;protein_id=NP_627925.1;transl_table=11
NC_003888.3	RefSeq	gene	4108183	4108686	.	-	.	ID=gene3761;Dbxref=GeneID:1099171;Name=SCH22A.13c;gbkey=Gene;gene=SCH22A.13c;gene_biotype=protein_coding;gene_synonym=SCH22A.13c;locus_tag=SCO3735
NC_003888.3	RefSeq	CDS	4108183	4108686	.	-	0	ID=cds3689;Parent=gene3761;Dbxref=Genbank:NP_627926.1,GeneID:1099171;Name=NP_627926.1;Note=SCH22A.13c%2C possible hypothetical protein%2C len: 167 aa. Contains possible N-teminal region signal peptide sequence. High content in proline and alanine residues;gbkey=CDS;gene=SCH22A.13c;product=hypothetical protein;protein_id=NP_627926.1;transl_table=11
NC_003888.3	RefSeq	gene	4108736	4109227	.	-	.	ID=gene3762;Dbxref=GeneID:1099172;Name=SCH22A.14c;gbkey=Gene;gene=SCH22A.14c;gene_biotype=protein_coding;gene_synonym=SCH22A.14c;locus_tag=SCO3736
NC_003888.3	RefSeq	CDS	4108736	4109227	.	-	0	ID=cds3690;Parent=gene3762;Dbxref=Genbank:NP_627927.1,GeneID:1099172;Name=NP_627927.1;Note=SCH22A.14c%2C probable RNA polymerase ECF sigma factor%2C len: 163 aa%3B similar to SW:RPOE_STRCO (EMBL:L29636) Streptomyces coelicolor RNA polymerase sigma-E factor SigE%2C 176 aa%3B fasta scores: opt: 214 z-score: 282.2 E(): 2.7e-08%3B 32.7%25 identity in 159 aa overlap;gbkey=CDS;gene=SCH22A.14c;product=RNA polymerase ECF sigma factor;protein_id=NP_627927.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4109232	4109235	.	-	.	ID=id4635;gbkey=RBS
NC_003888.3	RefSeq	gene	4109279	4109905	.	-	.	ID=gene3763;Dbxref=GeneID:1099173;Name=SCH22A.15c;gbkey=Gene;gene=SCH22A.15c;gene_biotype=protein_coding;gene_synonym=SCH22A.15c;locus_tag=SCO3737
NC_003888.3	RefSeq	CDS	4109279	4109905	.	-	0	ID=cds3691;Parent=gene3763;Dbxref=Genbank:NP_627928.1,GeneID:1099173;Name=NP_627928.1;Note=SCH22A.15c%2C possible lipoprotein%2C len: 208 aa%3B similar to TR:CAB63184 (EMBL:AL133469) Streptomyces coelicolor hypothetical protein SCM10.23%2C 221 aa%3B fasta scores: opt: 495 z-score: 484.3 E(): 1.5e-19%3B 42.4%25 identity in 205 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH22A.15c;product=lipoprotein;protein_id=NP_627928.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4109843	4109875	.	-	.	ID=id4636;Dbxref=GeneID:1099173;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCH22A.15c
NC_003888.3	RefSeq	gene	4109902	4110471	.	-	.	ID=gene3764;Dbxref=GeneID:1099174;Name=SCH22A.16c;gbkey=Gene;gene=SCH22A.16c;gene_biotype=protein_coding;gene_synonym=SCH22A.16c;locus_tag=SCO3738
NC_003888.3	RefSeq	CDS	4109902	4110471	.	-	0	ID=cds3692;Parent=gene3764;Dbxref=Genbank:NP_627929.1,GeneID:1099174;Name=NP_627929.1;Note=SCH22A.16c%2C possible integral membrane protein%2C len: 189 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.16c;product=hypothetical protein;protein_id=NP_627929.1;transl_table=11
NC_003888.3	RefSeq	gene	4110508	4111512	.	+	.	ID=gene3765;Dbxref=GeneID:1099175;Name=SCH22A.17;gbkey=Gene;gene=SCH22A.17;gene_biotype=protein_coding;gene_synonym=SCH22A.17;locus_tag=SCO3739
NC_003888.3	RefSeq	CDS	4110508	4111512	.	+	0	ID=cds3693;Parent=gene3765;Dbxref=Genbank:NP_627930.1,GeneID:1099175;Name=NP_627930.1;Note=SCH22A.17%2C possible epimerase%2C len: 334 aa%3B similar to TR:O69123 (EMBL:AF064070) Burkholderia pseudomallai  epimerase/dehydratase WbiB%2C 363 aa%3B fasta scores: opt: 547 z-score: 590.5 E(): 1.8e-25%3B 35.9%25 identity in 351 aa overlap and to SW:GALE_ERWAM (EMBL:X76172) Erwinia amylovora UDP-glucose 4-epimerase (EC 5.1.3.2) GalE%2C 337 aa%3B fasta scores: opt: 241 z-score: 265.2 E(): 2.4e-07%3B 28.1%25 identity in 360 aa overlap. Contains Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family;gbkey=CDS;gene=SCH22A.17;product=epimerase;protein_id=NP_627930.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4110514	4111509	.	+	.	ID=id4637;Dbxref=GeneID:1099175;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 147.70%2C E-value 2.1e-40;gbkey=misc_feature;gene=SCH22A.17
NC_003888.3	RefSeq	gene	4111533	4112645	.	-	.	ID=gene3766;Dbxref=GeneID:1099176;Name=SCH22A.18c;gbkey=Gene;gene=SCH22A.18c;gene_biotype=protein_coding;gene_synonym=SCH22A.18c;locus_tag=SCO3740
NC_003888.3	RefSeq	CDS	4111533	4112645	.	-	0	ID=cds3694;Parent=gene3766;Dbxref=Genbank:NP_627931.1,GeneID:1099176;Name=NP_627931.1;Note=SCH22A.18c%2C probable histidine kinase%2C len: 370 aa%3B similar to TR:CAB54569 (EMBL:AJ006392) Streptococcus pneumoniae histidine kinase HK02%2C 449 aa%3B fasta scores: opt: 425 z-score: 452.2 E(): 9.2e-18%3B 33.7%25 identity in 285 aa overlap and to SW:RESE_BACSU (EMBL:L09228) Bacillus subtilis sensor protein ResE (EC 2.7.3.-)%2C 589 aa%3B fasta scores: opt: 434 z-score: 460.1 E(): 3.4e-18%3B 35.8%25 identity in 229 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase. Contains also possible coiled-coil region at residues 83..95. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.18c;product=histidine kinase;protein_id=NP_627931.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4111548	4112168	.	-	.	ID=id4638;Dbxref=GeneID:1099176;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 185.90%2C E-value 6.4e-52;gbkey=misc_feature;gene=SCH22A.18c
NC_003888.3	RefSeq	gene	4112648	4113418	.	-	.	ID=gene3767;Dbxref=GeneID:1099177;Name=SCH22A.19c;gbkey=Gene;gene=SCH22A.19c;gene_biotype=protein_coding;gene_synonym=SCH22A.19c;locus_tag=SCO3741
NC_003888.3	RefSeq	CDS	4112648	4113418	.	-	0	ID=cds3695;Parent=gene3767;Dbxref=Genbank:NP_627932.1,GeneID:1099177;Name=NP_627932.1;Note=SCH22A.19c%2C probable response regulator%2C len: 256 aa%3B similar to TR:P74922 (EMBL:U67196) Thermotoga maritima DNA-binding response regulator DrrA%2C 239 aa%3B fasta scores: opt: 664 z-score: 686.2 E(): 8.4e-31%3B 45.3%25 identity in 234 aa overlap and to SW:AFQ1_STRCO (EMBL:D10654) Streptomyces coelicolor transcriptional regulatory protein AfsQ1%2C 225 aa%3B fasta scores: opt: 630 z-score: 652.1 E(): 6.7e-29%3B 47.1%25 identity in 221 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH22A.19c;product=response regulator;protein_id=NP_627932.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4112656	4112660	.	-	.	ID=id4639;Dbxref=GeneID:1099177;gbkey=RBS;gene=SCH22A.19c
NC_003888.3	RefSeq	sequence_feature	4112684	4112899	.	-	.	ID=id4640;Dbxref=GeneID:1099177;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 118.80%2C E-value 3e-34;gbkey=misc_feature;gene=SCH22A.19c
NC_003888.3	RefSeq	sequence_feature	4113002	4113334	.	-	.	ID=id4641;Dbxref=GeneID:1099177;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 160.50%2C E-value 2.9e-44;gbkey=misc_feature;gene=SCH22A.19c
NC_003888.3	RefSeq	gene	4113665	4114393	.	+	.	ID=gene3768;Dbxref=GeneID:1099178;Name=SCH22A.20;gbkey=Gene;gene=SCH22A.20;gene_biotype=protein_coding;gene_synonym=SCH22A.20;locus_tag=SCO3742
NC_003888.3	RefSeq	CDS	4113665	4114393	.	+	0	ID=cds3696;Parent=gene3768;Dbxref=Genbank:NP_627933.1,GeneID:1099178;Name=NP_627933.1;Note=SCH22A.20%2C possible glycosyltransferase%2C len: 242 aa%3B similar to various glycosyltransferases%2C e.g. TR:CAB50363 (EMBL:AJ248287) Pyrococcus abyssi dolichol-P-glucose synthetase%2C 378 aa%3B fasta scores: opt: 330 z-score: 398.4 E(): 9e-15%3B 31.4%25 identity in 220 aa overlap;gbkey=CDS;gene=SCH22A.20;product=glycosyltransferase;protein_id=NP_627933.1;transl_table=11
NC_003888.3	RefSeq	gene	4114390	4115031	.	+	.	ID=gene3769;Dbxref=GeneID:1099179;Name=SCH22A.21;gbkey=Gene;gene=SCH22A.21;gene_biotype=protein_coding;gene_synonym=SCH22A.21;locus_tag=SCO3743
NC_003888.3	RefSeq	CDS	4114390	4115031	.	+	0	ID=cds3697;Parent=gene3769;Dbxref=Genbank:NP_627934.1,GeneID:1099179;Name=NP_627934.1;Note=SCH22A.21%2C hypothetical protein%2C len: 213 aa%3B similar to various hypothetical proteins%2C e.g. TR:P74231 (EMBL:D90913) Synechocystis sp. hypothetical 23.5 kD protein%2C 211 aa%3B fasta scores: opt: 217 z-score: 247.2 E(): 2.4e-06%3B 30.7%25 identity in 192 aa overlap;gbkey=CDS;gene=SCH22A.21;product=hypothetical protein;protein_id=NP_627934.1;transl_table=11
NC_003888.3	RefSeq	gene	4115028	4115813	.	+	.	ID=gene3770;Dbxref=GeneID:1099180;Name=SCH22A.22;gbkey=Gene;gene=SCH22A.22;gene_biotype=protein_coding;gene_synonym=SCH22A.22;locus_tag=SCO3744
NC_003888.3	RefSeq	CDS	4115028	4115813	.	+	0	ID=cds3698;Parent=gene3770;Dbxref=Genbank:NP_627935.1,GeneID:1099180;Name=NP_627935.1;Note=SCH22A.22%2C unknown%2C len: 261 aa;gbkey=CDS;gene=SCH22A.22;product=hypothetical protein;protein_id=NP_627935.1;transl_table=11
NC_003888.3	RefSeq	gene	4115666	4116157	.	-	.	ID=gene3771;Dbxref=GeneID:1099181;Name=SCH22A.23c;gbkey=Gene;gene=SCH22A.23c;gene_biotype=protein_coding;gene_synonym=SCH22A.23c;locus_tag=SCO3745
NC_003888.3	RefSeq	CDS	4115666	4116157	.	-	0	ID=cds3699;Parent=gene3771;Dbxref=Genbank:NP_627936.1,GeneID:1099181;Name=NP_627936.1;Note=SCH22A.23c%2C possible lipoprotein%2C len: 163 aa%3B similar to TR:P96401 (EMBL:Z92669) Mycobacterium tuberculosis hypothetical 20.1 kD protein%2C 182 aa%3B fasta scores: opt: 287 z-score: 377.4 E(): 1.3e-13%3B 38.9%25 identity in 162 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.23c;product=lipoprotein;protein_id=NP_627936.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4116074	4116106	.	-	.	ID=id4642;Dbxref=GeneID:1099181;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCH22A.23c
NC_003888.3	RefSeq	gene	4116154	4117440	.	-	.	ID=gene3772;Dbxref=GeneID:1099182;Name=SCH22A.24c;gbkey=Gene;gene=SCH22A.24c;gene_biotype=protein_coding;gene_synonym=SCH22A.24c;locus_tag=SCO3746
NC_003888.3	RefSeq	CDS	4116154	4117440	.	-	0	ID=cds3700;Parent=gene3772;Dbxref=Genbank:NP_627937.1,GeneID:1099182;Name=NP_627937.1;Note=SCH22A.24c%2C membrane protein%2C len: 412 aa%3B similar to TR:P96400 (EMBL:Z92669) Mycobacterium tuberculosis hypothetical 47.4 kD protein%2C 442 aa%3B fasta scores: opt: 728 z-score: 812.0 E(): 0%3B 52.1%25 identity in 411 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.24c;product=hypothetical protein;protein_id=NP_627937.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4116165	4116168	.	-	.	ID=id4643;Dbxref=GeneID:1099182;gbkey=RBS;gene=SCH22A.24c
NC_003888.3	RefSeq	gene	4117506	4118876	.	+	.	ID=gene3773;Dbxref=GeneID:1099183;Name=SCH22A.25;gbkey=Gene;gene=SCH22A.25;gene_biotype=protein_coding;gene_synonym=SCH22A.25;locus_tag=SCO3747
NC_003888.3	RefSeq	CDS	4117506	4118876	.	+	0	ID=cds3701;Parent=gene3773;Dbxref=Genbank:NP_627938.1,GeneID:1099183;Name=NP_627938.1;Note=SCH22A.25%2C possible integral membrane protein%2C len: 456 aa%3B similar to TR:O06407 (EMBL:Z95558) Mycobacterium tuberculosis hypothetical 47.7 kD protein MTCY25D10.20c%2C 449 aa%3B fasta scores: opt: 1164 z-score: 1309.6 E(): 0%3B 49.6%25 identity in 464 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.25;product=hypothetical protein;protein_id=NP_627938.1;transl_table=11
NC_003888.3	RefSeq	gene	4118957	4119160	.	-	.	ID=gene3774;Dbxref=GeneID:1099184;Name=f40;gbkey=Gene;gene=f40;gene_biotype=protein_coding;gene_synonym=f40,SCH22A.26c;locus_tag=SCO3748
NC_003888.3	RefSeq	CDS	4118957	4119160	.	-	0	ID=cds3702;Parent=gene3774;Dbxref=Genbank:NP_627939.1,GeneID:1099184;Name=NP_627939.1;Note=SCH22A.26c%2C f40%2C cold shock protein%2C len: 67 aa%3B identical to previously sequenced TR:AAD49327 (EMBL:AF162937) Streptomyces coelicolor F40 and highly similar to SW:CSPF_STRCO (EMBL:X92686) Streptomyces coelicolor cold shock protein ScoF%2C 67 aa%2C fasta scores: opt: 408 z-score: 562.4 E(): 6.6e-24%3B 86.6%25 identity in 67 aa overlap. Contains Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain and match to Prosite entry PS00352 'Cold-shock' DNA-binding domain signature;gbkey=CDS;gene=f40;product=cold shock protein;protein_id=NP_627939.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4118960	4119160	.	-	.	ID=id4644;Dbxref=GeneID:1099184;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 143.30%2C E-value 4.4e-39;gbkey=misc_feature;gene=f40
NC_003888.3	RefSeq	repeat_region	4118962	4119160	.	-	.	ID=id4645;Dbxref=GeneID:1099184;gbkey=repeat_region;gene=f40
NC_003888.3	RefSeq	sequence_feature	4119059	4119118	.	-	.	ID=id4646;Dbxref=GeneID:1099184;Note=PS00352 'Cold-shock' DNA-binding domain signature;gbkey=misc_feature;gene=f40
NC_003888.3	RefSeq	ribosome_entry_site	4119167	4119171	.	-	.	ID=id4647;gbkey=RBS
NC_003888.3	RefSeq	gene	4119416	4120066	.	-	.	ID=gene3775;Dbxref=GeneID:1099185;Name=SCH22A.27c;gbkey=Gene;gene=SCH22A.27c;gene_biotype=protein_coding;gene_synonym=SCH22A.27c;locus_tag=SCO3749
NC_003888.3	RefSeq	CDS	4119416	4120066	.	-	0	ID=cds3703;Parent=gene3775;Dbxref=Genbank:NP_627940.1,GeneID:1099185;Name=NP_627940.1;Note=SCH22A.27c%2C possible integral membrane protein%2C len: 216 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.27c;product=hypothetical protein;protein_id=NP_627940.1;transl_table=11
NC_003888.3	RefSeq	gene	4120212	4121462	.	-	.	ID=gene3776;Dbxref=GeneID:1099186;Name=SCH22A.28c;gbkey=Gene;gene=SCH22A.28c;gene_biotype=protein_coding;gene_synonym=SCH22A.28c;locus_tag=SCO3750
NC_003888.3	RefSeq	CDS	4120212	4121462	.	-	0	ID=cds3704;Parent=gene3776;Dbxref=Genbank:NP_627941.1,GeneID:1099186;Name=NP_627941.1;Note=SCH22A.28c%2C possible two-component sensor histidine kinase%2C len: 416 aa%3B similar to SW:UHPB_SALTY (EMBL:M89480) Salmonella typhimurium sensor protein UhpB (EC 2.7.3.-)%2C 500 aa%3B fasta scores: opt: 274 z-score: 299.1 E(): 3e-09%3B 26.4%25 identity in 337 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.28c;product=two-component sensor histidine kinase;protein_id=NP_627941.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4121470	4121474	.	-	.	ID=id4648;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4121651	4121656	.	+	.	ID=id4649;gbkey=RBS
NC_003888.3	RefSeq	gene	4121664	4121933	.	+	.	ID=gene3777;Dbxref=GeneID:1099187;Name=SCH22A.29;gbkey=Gene;gene=SCH22A.29;gene_biotype=protein_coding;gene_synonym=SCH22A.29;locus_tag=SCO3751
NC_003888.3	RefSeq	CDS	4121664	4121933	.	+	0	ID=cds3705;Parent=gene3777;Dbxref=Genbank:NP_627942.1,GeneID:1099187;Name=NP_627942.1;Note=SCH22A.29%2C membrane protein%2C len: 89 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.29;product=hypothetical protein;protein_id=NP_627942.1;transl_table=11
NC_003888.3	RefSeq	gene	4121930	4122688	.	+	.	ID=gene3778;Dbxref=GeneID:1099188;Name=SCH22A.30;gbkey=Gene;gene=SCH22A.30;gene_biotype=protein_coding;gene_synonym=SCH22A.30;locus_tag=SCO3752
NC_003888.3	RefSeq	CDS	4121930	4122688	.	+	0	ID=cds3706;Parent=gene3778;Dbxref=Genbank:NP_627943.1,GeneID:1099188;Name=NP_627943.1;Note=SCH22A.30%2C possible ABC transporter ATP-binding protein%2C len: 252 aa%3B similar to TR:Q9XAA7 (EMBL:AL096837) Streptomyces coelicolor ABC transporter ATP-binding protein SCF43A.08%2C 264 aa%3B fasta scores: opt: 848 z-score: 944.8 E(): 0%3B 56.0%25 identity in 243 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCH22A.30;product=ABC transporter ATP-binding protein;protein_id=NP_627943.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4122059	4122613	.	+	.	ID=id4650;Dbxref=GeneID:1099188;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 210.30%2C E-value 2.9e-59;gbkey=misc_feature;gene=SCH22A.30
NC_003888.3	RefSeq	sequence_feature	4122080	4122103	.	+	.	ID=id4651;Dbxref=GeneID:1099188;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH22A.30
NC_003888.3	RefSeq	sequence_feature	4122386	4122430	.	+	.	ID=id4652;Dbxref=GeneID:1099188;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCH22A.30
NC_003888.3	RefSeq	ribosome_entry_site	4122677	4122682	.	+	.	ID=id4653;Dbxref=GeneID:1099188;gbkey=RBS;gene=SCH22A.30
NC_003888.3	RefSeq	gene	4122691	4125243	.	+	.	ID=gene3779;Dbxref=GeneID:1099189;Name=SCH22A.31;gbkey=Gene;gene=SCH22A.31;gene_biotype=protein_coding;gene_synonym=SCH22A.31;locus_tag=SCO3753
NC_003888.3	RefSeq	CDS	4122691	4125243	.	+	0	ID=cds3707;Parent=gene3779;Dbxref=Genbank:NP_627944.1,GeneID:1099189;Name=NP_627944.1;Note=SCH22A.31%2C possible integral membrane%2C len: 850 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.31;product=hypothetical protein;protein_id=NP_627944.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	4125292	4125419	.	-	.	ID=id4654;Note=27741 CGAGGGCTCGCCGGCAGACACCCGTCAGCACGGC-GGCGGCGCGCCTTCCGACCGGC AG 27801-27868 GCTCCCGGGCGGCCGTCCGCAGGC-CCGGTACCGCCCAGCGCGCAGAAGGCTGGCCA GC 27808. 47/60 (78%25) matches%2C 2 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4125465	4127978	.	-	.	ID=gene3780;Dbxref=GeneID:1099190;Name=SCH22A.32c;gbkey=Gene;gene=SCH22A.32c;gene_biotype=protein_coding;gene_synonym=SCH22A.32c,SCH63.01c;locus_tag=SCO3754
NC_003888.3	RefSeq	CDS	4125465	4127978	.	-	0	ID=cds3708;Parent=gene3780;Dbxref=Genbank:NP_733616.1,GeneID:1099190;Name=NP_733616.1;Note=SCH63.01c%2C possible ABC transport system integral membrane protein (fragment)%2C len: >319 aa%3B similar to TR:CAB77000 (EMBL:AL159178) Streptomyces coelicolor integral membrane protein SCH22A.31%2C 850 aa%3B fasta scores: opt: 510 z-score: 493.4 E(): 5.8e-20%3B 38.1%25 identity in 315 aa overlap. Contains possible hydrophobic membrane spanning regions~SCH22A.32c%2C possible transmembrane transport protein (fragment)%2C len: >569 aa%3B similar to TR:Q9XAA6 (EMBL:AL096837) Streptomyces coelicolor transmembrane transport protein SCF43A.09 463 a%3B fasta scores: opt: 255 z-score: 268.0 E(): 1.6e-07%3B 30.4%25 identity in 415 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH22A.32c;product=ABC transporter;protein_id=NP_733616.1;transl_table=11
NC_003888.3	RefSeq	gene	4127975	4128769	.	-	.	ID=gene3781;Dbxref=GeneID:1099191;Name=SCH63.02c;gbkey=Gene;gene=SCH63.02c;gene_biotype=protein_coding;gene_synonym=SCH63.02c;locus_tag=SCO3755
NC_003888.3	RefSeq	CDS	4127975	4128769	.	-	0	ID=cds3709;Parent=gene3781;Dbxref=Genbank:NP_627945.1,GeneID:1099191;Name=NP_627945.1;Note=SCH63.02c%2C possible ABC transport system ATP binding protein%2C len: 164 aa%3B similar to TR:CAB81857 (EMBL:AL161691) Streptomyces coelicolor ABC-transporter ATP binding protein SCD40A.12c%2C 246 aa%3B fasta scores: opt: 1007 z-score: 1087.6 E(): 0%3B 67.4%25 identity in 236 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCH63.02c;product=ABC transporter ATP-binding protein;protein_id=NP_627945.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4128083	4128637	.	-	.	ID=id4655;Dbxref=GeneID:1099191;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 208.40%2C E-value 1.1e-58;gbkey=misc_feature;gene=SCH63.02c
NC_003888.3	RefSeq	sequence_feature	4128266	4128310	.	-	.	ID=id4656;Dbxref=GeneID:1099191;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCH63.02c
NC_003888.3	RefSeq	sequence_feature	4128593	4128616	.	-	.	ID=id4657;Dbxref=GeneID:1099191;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH63.02c
NC_003888.3	RefSeq	gene	4128978	4129652	.	-	.	ID=gene3782;Dbxref=GeneID:1099192;Name=SCH63.03c;gbkey=Gene;gene=SCH63.03c;gene_biotype=protein_coding;gene_synonym=SCH63.03c;locus_tag=SCO3756
NC_003888.3	RefSeq	CDS	4128978	4129652	.	-	0	ID=cds3710;Parent=gene3782;Dbxref=Genbank:NP_627946.1,GeneID:1099192;Name=NP_627946.1;Note=SCH63.03c%2C possible two component system response regulator%2C len: 224 aa%3B similar to TR:Q9X8Q7 (EMBL:AL049754) Streptomyces coelicolor two-component system regulator SCH10.18c%2C 228 aa%3B fasta scores: opt: 827 z-score: 946.4 E(): 0%3B 62.1%25 identity in 219 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=CDS;gene=SCH63.03c;product=two component system response regulator;protein_id=NP_627946.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4128987	4129184	.	-	.	ID=id4658;Dbxref=GeneID:1099192;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 83.30%2C E-value 4.9e-21;gbkey=misc_feature;gene=SCH63.03c
NC_003888.3	RefSeq	sequence_feature	4129050	4129133	.	-	.	ID=id4659;Dbxref=GeneID:1099192;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCH63.03c
NC_003888.3	RefSeq	sequence_feature	4129293	4129646	.	-	.	ID=id4660;Dbxref=GeneID:1099192;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 124.80%2C E-value 1.6e-33;gbkey=misc_feature;gene=SCH63.03c
NC_003888.3	RefSeq	gene	4129649	4130995	.	-	.	ID=gene3783;Dbxref=GeneID:1099193;Name=SCH63.04c;gbkey=Gene;gene=SCH63.04c;gene_biotype=protein_coding;gene_synonym=SCH63.04c;locus_tag=SCO3757
NC_003888.3	RefSeq	CDS	4129649	4130995	.	-	0	ID=cds3711;Parent=gene3783;Dbxref=Genbank:NP_627947.1,GeneID:1099193;Name=NP_627947.1;Note=SCH63.04c%2C possible two component system sensor kinase%2C len: 448 aa%3B similar to TR:Q9X8Q6 (EMBL:AL049754) Streptomyces coelicolor two-component system sensor kinase SCH10.17c%2C 472 aa%3B fasta scores: opt: 595 z-score: 616.4 E(): 8.2e-27%3B 36.4%25 identity in 453 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.04c;product=two component system sensor kinase;protein_id=NP_627947.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4129660	4129663	.	-	.	ID=id4661;Dbxref=GeneID:1099193;gbkey=RBS;gene=SCH63.04c
NC_003888.3	RefSeq	ribosome_entry_site	4131004	4131008	.	-	.	ID=id4662;gbkey=RBS
NC_003888.3	RefSeq	gene	4131008	4132060	.	-	.	ID=gene3784;Dbxref=GeneID:1099194;Name=SCH63.05c;gbkey=Gene;gene=SCH63.05c;gene_biotype=protein_coding;gene_synonym=SCH63.05c;locus_tag=SCO3758
NC_003888.3	RefSeq	CDS	4131008	4132060	.	-	0	ID=cds3712;Parent=gene3784;Dbxref=Genbank:NP_627948.1,GeneID:1099194;Name=NP_627948.1;Note=SCH63.05c%2C possible fatty acid desaturase%2C len: 350 aa%3B similar to TR:Q9X8W4 (EMBL:AL078610) Streptomyces coelicolor delta fatty acid desaturase SCH35.42c%2C 345 aa%3B fasta scores: opt: 1041 z-score: 1260.0 E(): 0%3B 50.3%25 identity in 332 aa overlap and to TR:Q9SWQ9 (EMBL:AF139720) Euglena gracilis delta 8 fatty acid desaturase Efd1%2C 419 aa%3B fasta scores: opt: 421 z-score: 510.9 E(): 6.1e-21%3B 27.3%25 identity in 333 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.05c;product=fatty acid desaturase;protein_id=NP_627948.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4132066	4132071	.	-	.	ID=id4663;gbkey=RBS
NC_003888.3	RefSeq	gene	4132135	4133346	.	-	.	ID=gene3785;Dbxref=GeneID:1099195;Name=SCH63.06c;gbkey=Gene;gene=SCH63.06c;gene_biotype=protein_coding;gene_synonym=SCH63.06c;locus_tag=SCO3759
NC_003888.3	RefSeq	CDS	4132135	4133346	.	-	0	ID=cds3713;Parent=gene3785;Dbxref=Genbank:NP_627949.1,GeneID:1099195;Name=NP_627949.1;Note=SCH63.06c%2C possible integral membrane protein%2C len: 403 aa%3B similar to TR:Q9X8Q9 (EMBL:AL049754) Streptomyces coelicolor  membrane protein SCH10.20c%2C 420 aa%3B fasta scores: opt: 898 z-score: 1025.8 E(): 0%3B 45.3%25 identity in 395 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.06c;product=hypothetical protein;protein_id=NP_627949.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4133351	4133354	.	-	.	ID=id4664;gbkey=RBS
NC_003888.3	RefSeq	gene	4133355	4134332	.	-	.	ID=gene3786;Dbxref=GeneID:1099196;Name=SCH63.07c;gbkey=Gene;gene=SCH63.07c;gene_biotype=protein_coding;gene_synonym=SCH63.07c;locus_tag=SCO3760
NC_003888.3	RefSeq	CDS	4133355	4134332	.	-	0	ID=cds3714;Parent=gene3786;Dbxref=Genbank:NP_627950.1,GeneID:1099196;Name=NP_627950.1;Note=SCH63.07c%2C possible hypothetical protein%2C len: 325 aa%3B similar to TR:Q9X8R0 (EMBL:AL049754) Streptomyces coelicolor hypothetical 33.9 kDa protein SCH10.21c%2C 329 aa%3B fasta scores: opt: 589 z-score: 637.7 E(): 5.3e-28%3B 37.5%25 identity in 328 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH63.07c;product=hypothetical protein;protein_id=NP_627950.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4134340	4134345	.	-	.	ID=id4665;gbkey=RBS
NC_003888.3	RefSeq	gene	4134484	4134996	.	-	.	ID=gene3787;Dbxref=GeneID:1099197;Name=SCH63.08c;gbkey=Gene;gene=SCH63.08c;gene_biotype=protein_coding;gene_synonym=SCH63.08c;locus_tag=SCO3761
NC_003888.3	RefSeq	CDS	4134484	4134996	.	-	0	ID=cds3715;Parent=gene3787;Dbxref=Genbank:NP_627951.1,GeneID:1099197;Name=NP_627951.1;Note=SCH63.08c%2C unknown%2C len: 170 aa;gbkey=CDS;gene=SCH63.08c;product=hypothetical protein;protein_id=NP_627951.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4135003	4135007	.	-	.	ID=id4666;gbkey=RBS
NC_003888.3	RefSeq	gene	4135076	4135273	.	-	.	ID=gene3788;Dbxref=GeneID:1099198;Name=SCH63.09c;gbkey=Gene;gene=SCH63.09c;gene_biotype=protein_coding;gene_synonym=SCH63.09c;locus_tag=SCO3762
NC_003888.3	RefSeq	CDS	4135076	4135273	.	-	0	ID=cds3716;Parent=gene3788;Dbxref=Genbank:NP_627952.1,GeneID:1099198;Name=NP_627952.1;Note=SCH63.09c%2C unknown%2C len: 65 aa;gbkey=CDS;gene=SCH63.09c;product=hypothetical protein;protein_id=NP_627952.1;transl_table=11
NC_003888.3	RefSeq	gene	4135438	4137522	.	-	.	ID=gene3789;Dbxref=GeneID:1099199;Name=SCH63.10c;gbkey=Gene;gene=SCH63.10c;gene_biotype=protein_coding;gene_synonym=SCH63.10c;locus_tag=SCO3763
NC_003888.3	RefSeq	CDS	4135438	4137522	.	-	0	ID=cds3717;Parent=gene3789;Dbxref=Genbank:NP_627953.1,GeneID:1099199;Name=NP_627953.1;Note=SCH63.10c%2C hypothetical protein%2C len: 694 aa%3B N-terminal region similar to SW:TERD_ALCSP (EMBL:M20238) Alcaligenes sp. tellurium resistance protein TerD (plasmid determined)%2C 192 aa%3B fasta scores: opt: 420 z-score: 446.6 E(): 2.3e-17%3B 39.8%25 identity in 186 aa overlap and C-terminal region similar to C-terminal region of TR:Q9X843 (EMBL:AL049727) Streptomyces coelicolor transferase (fragment) SC9B1.24%2C 317 aa%3B blastp scores: Score %3D 76 (26.8 bits)%2C Expect %3D 7.3%2C Sum P(2) %3D 1.0%3B Identities %3D 52/165 (31%25)%2C Positives %3D 72/165 (43%25). Contains Pfam match to entry PF02342 TerD at N-terminal region;gbkey=CDS;gene=SCH63.10c;product=hypothetical protein;protein_id=NP_627953.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4136995	4137357	.	-	.	ID=id4667;Dbxref=GeneID:1099199;Note=Pfam match to entry PF02342 TerD%2C score 94.40%2C E-value 2.2e-24;gbkey=misc_feature;gene=SCH63.10c
NC_003888.3	RefSeq	gene	4137713	4138738	.	-	.	ID=gene3790;Dbxref=GeneID:1099200;Name=SCH63.11c;gbkey=Gene;gene=SCH63.11c;gene_biotype=protein_coding;gene_synonym=SCH63.11c;locus_tag=SCO3764
NC_003888.3	RefSeq	CDS	4137713	4138738	.	-	0	ID=cds3718;Parent=gene3790;Dbxref=Genbank:NP_627954.1,GeneID:1099200;Name=NP_627954.1;Note=SCH63.11c%2C possible integral membrane protein%2C len: 341 aa%3B similar to TR:CAC01476 (EMBL:AL391014) Streptomyces coelicolor  integral membrane protein 2SCG1.27%2C 337 aa%3B fasta scores: opt: 1316 z-score: 1472.5 E(): 0%3B 59.9%25 identity in 337 aa overlap. Contains Pfam match to entry PF01595 DUF21%2C Domain of unknown function DUF21 and 2x match to PF00571 CBS%2C CBS domain. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.11c;product=hypothetical protein;protein_id=NP_627954.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4137740	4137901	.	-	.	ID=id4668;Dbxref=GeneID:1099200;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 29.30%2C E-value 9e-05;gbkey=misc_feature;gene=SCH63.11c
NC_003888.3	RefSeq	sequence_feature	4137920	4138081	.	-	.	ID=id4669;Dbxref=GeneID:1099200;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 18.20%2C E-value 0.19;gbkey=misc_feature;gene=SCH63.11c
NC_003888.3	RefSeq	sequence_feature	4138136	4138732	.	-	.	ID=id4670;Dbxref=GeneID:1099200;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function DUF21%2C score 150.40%2C E-value 3.1e-41;gbkey=misc_feature;gene=SCH63.11c
NC_003888.3	RefSeq	gene	4138735	4140114	.	-	.	ID=gene3791;Dbxref=GeneID:1099201;Name=SCH63.12c;gbkey=Gene;gene=SCH63.12c;gene_biotype=protein_coding;gene_synonym=SCH63.12c;locus_tag=SCO3765
NC_003888.3	RefSeq	CDS	4138735	4140114	.	-	0	ID=cds3719;Parent=gene3791;Dbxref=Genbank:NP_627955.1,GeneID:1099201;Name=NP_627955.1;Note=SCH63.12c%2C possible integral membrane protein%2C len: 459 aa%3B similar to TR:CAC01475 (EMBL:AL391014) Streptomyces coelicolor  integral membrane protein 2SCG1.26%2C 468 aa%3B fasta scores: opt: 1879 z-score: 2014.4 E(): 0%3B 67.8%25 identity in 441 aa overlap. Contains Pfam match to entry PF01595 DUF21%2C Domain of unknown function DUF21 and 2x matches to PF00571 CBS%2C CBS domain. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.12c;product=hypothetical protein;protein_id=NP_627955.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4138747	4138750	.	-	.	ID=id4671;Dbxref=GeneID:1099201;gbkey=RBS;gene=SCH63.12c
NC_003888.3	RefSeq	sequence_feature	4139110	4139268	.	-	.	ID=id4672;Dbxref=GeneID:1099201;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 11.60%2C E-value 1.8;gbkey=misc_feature;gene=SCH63.12c
NC_003888.3	RefSeq	sequence_feature	4139293	4139457	.	-	.	ID=id4673;Dbxref=GeneID:1099201;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 35.20%2C E-value 1.5e-06;gbkey=misc_feature;gene=SCH63.12c
NC_003888.3	RefSeq	sequence_feature	4139512	4140105	.	-	.	ID=id4674;Dbxref=GeneID:1099201;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function DUF21%2C score 134.80%2C E-value 1.5e-36;gbkey=misc_feature;gene=SCH63.12c
NC_003888.3	RefSeq	gene	4140307	4141329	.	+	.	ID=gene3792;Dbxref=GeneID:1099202;Name=SCH63.13;gbkey=Gene;gene=SCH63.13;gene_biotype=protein_coding;gene_synonym=SCH63.13;locus_tag=SCO3766
NC_003888.3	RefSeq	CDS	4140307	4141329	.	+	0	ID=cds3720;Parent=gene3792;Dbxref=Genbank:NP_627956.1,GeneID:1099202;Name=NP_627956.1;Note=SCH63.13%2C hypothetical protein%2C len: 340 aa%3B highly similar to TR:Q9S1P4 (EMBL:AL109972) Streptomyces coelicolor hypothetical protein SCJ9A.26%2C 341 aa%3B fasta scores: opt: 1171 z-score: 1269.9 E(): 0%3B 61.8%25 identity in 340 aa overlap;gbkey=CDS;gene=SCH63.13;product=hypothetical protein;protein_id=NP_627956.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4141428	4141431	.	+	.	ID=id4675;gbkey=RBS
NC_003888.3	RefSeq	gene	4141437	4141892	.	+	.	ID=gene3793;Dbxref=GeneID:1099203;Name=SCH63.14;gbkey=Gene;gene=SCH63.14;gene_biotype=protein_coding;gene_synonym=SCH63.14;locus_tag=SCO3767
NC_003888.3	RefSeq	CDS	4141437	4141892	.	+	0	ID=cds3721;Parent=gene3793;Dbxref=Genbank:NP_627957.1,GeneID:1099203;Name=NP_627957.1;Note=SCH63.14%2C hypothetical protein%2C len: 151 aa%3B similar to plasmid encoded TR:Q52355 (EMBL:L38824) Serratia marcescens tellurite resistance protein TerB%2C plasmid R478%2C 151 aa%3B fasta scores: opt: 257 z-score: 320.7 E(): 2.4e-10%3B 26.5%25 identity in 151 aa overlap and to TR:CAC44659 (EMBL:AL596248) Streptomyces coelicolor conserved hypothetical protein SCBAC17A6.14c%2C 191 aa%3B fasta scores: opt: 588 Z-score: 695.8 E(): 4e-31%3B 65.185%25 identity in 135 aa overlap;gbkey=CDS;gene=SCH63.14;product=hypothetical protein;protein_id=NP_627957.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4141983	4141988	.	+	.	ID=id4676;gbkey=RBS
NC_003888.3	RefSeq	gene	4141996	4142244	.	+	.	ID=gene3794;Dbxref=GeneID:1099204;Name=SCH63.15;gbkey=Gene;gene=SCH63.15;gene_biotype=protein_coding;gene_synonym=SCH63.15;locus_tag=SCO3768
NC_003888.3	RefSeq	CDS	4141996	4142244	.	+	0	ID=cds3722;Parent=gene3794;Dbxref=Genbank:NP_627958.1,GeneID:1099204;Name=NP_627958.1;Note=SCH63.15%2C possible translocase%2C len: 82 aa%3B similar to SW:YK94_MYCTU (EMBL:Z73966) Mycobacterium tuberculosis hypothetical 8.9 kDa protein MTCY49.34c%2C 83 aa%3B fasta scores: opt: 123 z-score: 165.1 E(): 0.11%3B 40.6%25 identity in 69 aa overlap. Contains Pfam match to entry PF02416 MttA_Hcf106;gbkey=CDS;gene=SCH63.15;product=translocase;protein_id=NP_627958.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4141999	4142157	.	+	.	ID=id4677;Dbxref=GeneID:1099204;Note=Pfam match to entry PF02416 MttA_Hcf106%2C score 14.70%2C E-value 0.00068;gbkey=misc_feature;gene=SCH63.15
NC_003888.3	RefSeq	gene	4142257	4142994	.	-	.	ID=gene3795;Dbxref=GeneID:1099205;Name=SCH63.16c;gbkey=Gene;gene=SCH63.16c;gene_biotype=protein_coding;gene_synonym=SCH63.16c;locus_tag=SCO3769
NC_003888.3	RefSeq	CDS	4142257	4142994	.	-	0	ID=cds3723;Parent=gene3795;Dbxref=Genbank:NP_627959.1,GeneID:1099205;Name=NP_627959.1;Note=SCH63.16c%2C possible tetR family transcriptional regulatory protein%2C len: 245 aa%3B similar to TR:Q9WX19 (EMBL:AL079345) Streptomyces coelicolor transcriptional regulator SCE68.13%2C 230 aa%3B fasta scores: opt: 359 z-score: 384.4 E(): 6.8e-14%3B 37.2%25 identity in 231 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif at residues 38..59 (+2.58 SD);gbkey=CDS;gene=SCH63.16c;product=TetR family transcriptional regulator;protein_id=NP_627959.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4142791	4142928	.	-	.	ID=id4678;Dbxref=GeneID:1099205;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 61.70%2C E-value 1.6e-14;gbkey=misc_feature;gene=SCH63.16c
NC_003888.3	RefSeq	ribosome_entry_site	4143001	4143005	.	-	.	ID=id4679;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4143064	4143067	.	+	.	ID=id4680;gbkey=RBS
NC_003888.3	RefSeq	gene	4143070	4144254	.	+	.	ID=gene3796;Dbxref=GeneID:1099206;Name=SCH63.17;gbkey=Gene;gene=SCH63.17;gene_biotype=protein_coding;gene_synonym=SCH63.17;locus_tag=SCO3770
NC_003888.3	RefSeq	CDS	4143070	4144254	.	+	0	ID=cds3724;Parent=gene3796;Dbxref=Genbank:NP_627960.1,GeneID:1099206;Name=NP_627960.1;Note=SCH63.17%2C probable cytochrome P450 oxidoreductase%2C len: 394 aa%3B similar to SW:CPXK_SACER (EMBL:M83110) Saccharopolyspora erythraea cytochrome P450 107B1 (EC 1.14.-.-) (P450CVIIB1) Cyp107B1%2C 405 aa%3B fasta scores: opt: 1038 z-score: 1154.8 E(): 0%3B 46.9%25 identity in 373 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450 and match to Prosite entry PS00211 ABC transporters family signature and PS00086 Cytochrome P450 cysteine heme-iron ligand signature. Also contains a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCH63.17;product=cytochrome P450 oxidoreductase;protein_id=NP_627960.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4143088	4143090	.	+	.	ID=id4681;Dbxref=GeneID:1099206;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCH63.17
NC_003888.3	RefSeq	sequence_feature	4143307	4144155	.	+	.	ID=id4682;Dbxref=GeneID:1099206;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 212.10%2C E-value 8.1e-60;gbkey=misc_feature;gene=SCH63.17
NC_003888.3	RefSeq	sequence_feature	4143958	4144002	.	+	.	ID=id4683;Dbxref=GeneID:1099206;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCH63.17
NC_003888.3	RefSeq	sequence_feature	4144072	4144101	.	+	.	ID=id4684;Dbxref=GeneID:1099206;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SCH63.17
NC_003888.3	RefSeq	gene	4144272	4145912	.	-	.	ID=gene3797;Dbxref=GeneID:1099207;Name=SCH63.18c;gbkey=Gene;gene=SCH63.18c;gene_biotype=protein_coding;gene_synonym=SCH63.18c;locus_tag=SCO3771
NC_003888.3	RefSeq	CDS	4144272	4145912	.	-	0	ID=cds3725;Parent=gene3797;Dbxref=Genbank:NP_627961.1,GeneID:1099207;Name=NP_627961.1;Note=SCH63.18c%2C probable  penicillin binding protein%2C len: 546 aa%3B similar to TR:P72405 (EMBL:U56256) Streptomyces clavuligerus high molecular weight group B penicillin binding protein PcbR%2C 551 aa%3B fasta scores: opt: 1063 z-score: 1122.1 E(): 0%3B 37.7%25 identity in 559 aa overlap. Contains Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH63.18c;product=penicillin binding protein;protein_id=NP_627961.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4144305	4145159	.	-	.	ID=id4685;Dbxref=GeneID:1099207;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 158.90%2C E-value 8.7e-44;gbkey=misc_feature;gene=SCH63.18c
NC_003888.3	RefSeq	ribosome_entry_site	4145920	4145924	.	-	.	ID=id4686;gbkey=RBS
NC_003888.3	RefSeq	gene	4145930	4146976	.	-	.	ID=gene3798;Dbxref=GeneID:1099208;Name=SCH63.19c;gbkey=Gene;gene=SCH63.19c;gene_biotype=protein_coding;gene_synonym=SCH63.19c;locus_tag=SCO3772
NC_003888.3	RefSeq	CDS	4145930	4146976	.	-	0	ID=cds3726;Parent=gene3798;Dbxref=Genbank:NP_627962.1,GeneID:1099208;Name=NP_627962.1;Note=SCH63.19c%2C possible hypothetical protein%2C len: 348 aa%3B similar to TR:AAG03932 (EMBL:AE004490) Pseudomonas aeruginosa hypothetical 35.1 kDa protein PA0543%2C 322 aa%3B fasta scores: opt: 419 z-score: 410.9 E(): 2.3e-15%3B 33.6%25 identity in 295 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH63.19c;product=hypothetical protein;protein_id=NP_627962.1;transl_table=11
NC_003888.3	RefSeq	gene	4147062	4148024	.	+	.	ID=gene3799;Dbxref=GeneID:1099209;Name=SCH63.20;gbkey=Gene;gene=SCH63.20;gene_biotype=protein_coding;gene_synonym=SCH63.20;locus_tag=SCO3773
NC_003888.3	RefSeq	CDS	4147062	4148024	.	+	0	ID=cds3727;Parent=gene3799;Dbxref=Genbank:NP_627963.1,GeneID:1099209;Name=NP_627963.1;Note=SCH63.20%2C probable lysR family transcriptional regulatory protein%2C len: 320 aa%3B similar to SW:ALSR_BACSU (EMBL:L04470) Bacillus subtilis Als operon regulatory protein AlsR%2C 302 aa%3B fasta scores: opt: 463 z-score: 517.7 E(): 3e-21%3B 30.4%25 identity in 260 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Also contains possible helix-turn-helix motif at residues 17..38 (+2.87 SD);gbkey=CDS;gene=SCH63.20;product=LysR family transcriptional regulator;protein_id=NP_627963.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4147071	4147499	.	+	.	ID=id4687;Dbxref=GeneID:1099209;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 157.80%2C E-value 1.9e-43;gbkey=misc_feature;gene=SCH63.20
NC_003888.3	RefSeq	sequence_feature	4147113	4147205	.	+	.	ID=id4688;Dbxref=GeneID:1099209;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCH63.20
NC_003888.3	RefSeq	repeat_region	4148045	4148071	.	+	.	ID=id4689;Note=4x degenerate repeat RU1: CACCGACC(G/C)ACGC(A/G)CCCCACCACCCCC;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4148053	4148719	.	+	.	ID=id4690;Note=High G+C content region (80.5%25);gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	4148071	4148081	.	+	.	ID=id4691;Note=6x degenerate repeat RU2: CACCGAC(C/A)CC(G/A);gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4148161	4148171	.	+	.	ID=id4692;Note=RU2;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4148219	4148245	.	+	.	ID=id4693;Note=RU1;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4148251	4148261	.	+	.	ID=id4694;Note=RU2;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4148353	4148363	.	+	.	ID=id4695;Note=RU2;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4148405	4148431	.	+	.	ID=id4696;Note=RU1;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4148431	4148441	.	+	.	ID=id4697;Note=RU2;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4148533	4148543	.	+	.	ID=id4698;Note=RU2;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4148585	4148611	.	+	.	ID=id4699;Note=RU1;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	4148676	4148681	.	+	.	ID=id4700;gbkey=RBS
NC_003888.3	RefSeq	gene	4148686	4149564	.	+	.	ID=gene3800;Dbxref=GeneID:1099210;Name=SCH63.21;gbkey=Gene;gene=SCH63.21;gene_biotype=protein_coding;gene_synonym=SCH63.21;locus_tag=SCO3774
NC_003888.3	RefSeq	CDS	4148686	4149564	.	+	0	ID=cds3728;Parent=gene3800;Dbxref=Genbank:NP_627964.1,GeneID:1099210;Name=NP_627964.1;Note=SCH63.21%2C possible beta-lactamase related protein%2C len: 292 aa%3B similar to SW:BLAB_STRCI (EMBL:D00937) Streptomyces cacaoi beta-lactamase regulatory protein BlaB%2C 312 aa%3B fasta scores: opt: 225 z-score: 271.2 E(): 1.4e-07%3B 34.6%25 identity in 301 aa overlap;gbkey=CDS;gene=SCH63.21;product=beta-lactamase;protein_id=NP_627964.1;transl_table=11
NC_003888.3	RefSeq	gene	4149589	4151322	.	-	.	ID=gene3801;Dbxref=GeneID:1099211;Name=SCH63.22c;gbkey=Gene;gene=SCH63.22c;gene_biotype=protein_coding;gene_synonym=SCH63.22c;locus_tag=SCO3775
NC_003888.3	RefSeq	CDS	4149589	4151322	.	-	0	ID=cds3729;Parent=gene3801;Dbxref=Genbank:NP_627965.1,GeneID:1099211;Name=NP_627965.1;Note=SCH63.22c%2C unknown%2C len: 577 aa. High content in glycine and alanine amino acid residues;gbkey=CDS;gene=SCH63.22c;product=hypothetical protein;protein_id=NP_627965.1;transl_table=11
NC_003888.3	RefSeq	gene	4151301	4151843	.	+	.	ID=gene3802;Dbxref=GeneID:1099212;Name=SCH63.23;gbkey=Gene;gene=SCH63.23;gene_biotype=protein_coding;gene_synonym=SCH63.23;locus_tag=SCO3776
NC_003888.3	RefSeq	CDS	4151301	4151843	.	+	0	ID=cds3730;Parent=gene3802;Dbxref=Genbank:NP_627966.1,GeneID:1099212;Name=NP_627966.1;Note=SCH63.23%2C possible membrane protein%2C len: 180 aa. Contains possible hydrophobic membrane spanning region and 3x degenerate repeat: DTG(T/A). Also contains a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCH63.23;product=hypothetical protein;protein_id=NP_627966.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4151355	4151390	.	+	.	ID=id4701;Dbxref=GeneID:1099212;Note=3x degenerate repeat translated in SCH63.23;gbkey=repeat_region;gene=SCH63.23
NC_003888.3	RefSeq	sequence_feature	4151442	4151444	.	+	.	ID=id4702;Dbxref=GeneID:1099212;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCH63.23
NC_003888.3	RefSeq	ribosome_entry_site	4151842	4151845	.	+	.	ID=id4703;gbkey=RBS
NC_003888.3	RefSeq	gene	4151848	4152975	.	+	.	ID=gene3803;Dbxref=GeneID:1099213;Name=SCH63.24;gbkey=Gene;gene=SCH63.24;gene_biotype=protein_coding;gene_synonym=SCH63.24;locus_tag=SCO3777
NC_003888.3	RefSeq	CDS	4151848	4152975	.	+	0	ID=cds3731;Parent=gene3803;Dbxref=Genbank:NP_627967.1,GeneID:1099213;Name=NP_627967.1;Note=SCH63.24%2C probable peptidase%2C len: 375 aa%3B similar to SW:PEPQ_LACDL (EMBL:Z34896) Lactobacillus delbrueckii XAA-PRO dipeptidase (EC 3.4.13.9) PepQ%2C 368 aa%3B fasta scores: opt: 623 z-score: 715.2 E(): 2.6e-32%3B 32.1%25 identity in 365 aa overlap and to TR:CAB41569 (EMBL:AL049727) Streptomyces coelicolor dipeptidase SC9B1.23%2C 376 aa%3B fasta scores: opt: 1608 z-score: 1515.1 E(): 0%3B 63.5%25 identity in 373 aa overlap. Contains Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24;gbkey=CDS;gene=SCH63.24;product=peptidase;protein_id=NP_627967.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4152289	4152963	.	+	.	ID=id4704;Dbxref=GeneID:1099213;Note=Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24%2C score 165.20%2C E-value 1.1e-45;gbkey=misc_feature;gene=SCH63.24
NC_003888.3	RefSeq	gene	4153150	4154442	.	+	.	ID=gene3804;Dbxref=GeneID:1099214;Name=SCH63.25;gbkey=Gene;gene=SCH63.25;gene_biotype=protein_coding;gene_synonym=SCH63.25;locus_tag=SCO3778
NC_003888.3	RefSeq	CDS	4153150	4154442	.	+	0	ID=cds3732;Parent=gene3804;Dbxref=Genbank:NP_627968.1,GeneID:1099214;Name=NP_627968.1;Note=SCH63.25%2C possible threonyl tRNA synthetase%2C len: 430 aa%3B highly similar to C-terminal region of many threonyl tRNA synthetases%2C e.g. SW:SYT1_BACSU (EMBL:M36594) Bacillus subtilis threonyl tRNA synthetase 1 (EC 6.1.1.3) ThrS%2C 643 aa%3B fasta scores: opt: 1274 z-score: 1489.5 E(): 0%3B 50.9%25 identity in 379 aa overlap. Contains Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetase class II (G%2C H%2C P%2C S and T);gbkey=CDS;gene=SCH63.25;product=threonyl tRNA synthetase;protein_id=NP_627968.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4153222	4154361	.	+	.	ID=id4705;Dbxref=GeneID:1099214;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetase class II (G%2C H%2C P%2C S and T)%2C score 228.00%2C E-value 1.4e-64;gbkey=misc_feature;gene=SCH63.25
NC_003888.3	RefSeq	ribosome_entry_site	4154576	4154581	.	+	.	ID=id4706;gbkey=RBS
NC_003888.3	RefSeq	gene	4154591	4155571	.	+	.	ID=gene3805;Dbxref=GeneID:1099215;Name=SCH63.26;gbkey=Gene;gene=SCH63.26;gene_biotype=protein_coding;gene_synonym=SCH63.26;locus_tag=SCO3779
NC_003888.3	RefSeq	CDS	4154591	4155571	.	+	0	ID=cds3733;Parent=gene3805;Dbxref=Genbank:NP_627969.1,GeneID:1099215;Name=NP_627969.1;Note=SCH63.26%2C probable nucleoside hydrolase%2C len: 326 aa%3B similar to SW:IUNH_CRIFA (EMBL:U43371) Crithidia fasciculata inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) IunH%2C 314 aa%3B fasta scores: opt: 634 z-score: 671.5 E(): 6.9e-30%3B 35.0%25 identity in 320 aa overlap. Contains Pfam match to entry PF01156 IU_nuc_hydro%2C Inosine-uridine preferring nucleoside hydrolase;gbkey=CDS;gene=SCH63.26;product=nucleoside hydrolase;protein_id=NP_627969.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4154618	4155565	.	+	.	ID=id4707;Dbxref=GeneID:1099215;Note=Pfam match to entry PF01156 IU_nuc_hydro%2C Inosine-uridine preferring nucleoside hydrolase%2C score 273.10%2C E-value 3.7e-78;gbkey=misc_feature;gene=SCH63.26
NC_003888.3	RefSeq	gene	4155682	4157352	.	+	.	ID=gene3806;Dbxref=GeneID:1099216;Name=SCH63.27;gbkey=Gene;gene=SCH63.27;gene_biotype=protein_coding;gene_synonym=SCH63.27;locus_tag=SCO3780
NC_003888.3	RefSeq	CDS	4155682	4157352	.	+	0	ID=cds3734;Parent=gene3806;Dbxref=Genbank:NP_627970.1,GeneID:1099216;Name=NP_627970.1;Note=SCH63.27%2C probable sugar hydrolase%2C len: 556 aa%3B similar to SW:TREC_ECOLI (EMBL:U06195) Escherichia coli trehalose-6-phosphate hydrolase (EC 3.2.1.93) TreC%2C 551 aa%3B fasta scores: opt: 833 z-score: 927.7 E(): 0%3B 35.4%25 identity in 557 aa overlap and to TR:CAB90876 (EMBL:AL355753) Streptomyces coelicolor aglA%2C alpha-glucosidase SC10B7.23c%2C 577 aa%3B fasta scores: opt: 1146 z-score: 1084.7 E(): 0%3B 56.8%25 identity in 572 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase;gbkey=CDS;gene=SCH63.27;product=sugar hydrolase;protein_id=NP_627970.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4155751	4157157	.	+	.	ID=id4708;Dbxref=GeneID:1099216;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 258.30%2C E-value 1e-73;gbkey=misc_feature;gene=SCH63.27
NC_003888.3	RefSeq	ribosome_entry_site	4157470	4157478	.	+	.	ID=id4709;gbkey=RBS
NC_003888.3	RefSeq	gene	4157484	4158338	.	+	.	ID=gene3807;Dbxref=GeneID:1099217;Name=SCH63.28;gbkey=Gene;gene=SCH63.28;gene_biotype=protein_coding;gene_synonym=SCH63.28;locus_tag=SCO3781
NC_003888.3	RefSeq	CDS	4157484	4158338	.	+	0	ID=cds3735;Parent=gene3807;Dbxref=Genbank:NP_627971.1,GeneID:1099217;Name=NP_627971.1;Note=SCH63.28%2C possible hypothetical protein%2C len: 284 aa%3B similar to TR:CAB89024 (EMBL:AL353870) Streptomyces coelicolor lipoprotein SC6F7.16c%2C 281 aa%3B fasta scores: opt: 467 z-score: 500.3 E(): 2.4e-20%3B 39.7%25 identity in 277 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH63.28;product=hypothetical protein;protein_id=NP_627971.1;transl_table=11
NC_003888.3	RefSeq	gene	4158580	4159929	.	-	.	ID=gene3808;Dbxref=GeneID:1099218;Name=SCH63.29c;gbkey=Gene;gene=SCH63.29c;gene_biotype=protein_coding;gene_synonym=SCH63.29c;locus_tag=SCO3782
NC_003888.3	RefSeq	CDS	4158580	4159929	.	-	0	ID=cds3736;Parent=gene3808;Dbxref=Genbank:NP_627972.1,GeneID:1099218;Name=NP_627972.1;Note=SCH63.29c%2C possible regulatory protein%2C len: 449 aa%3B similar to TR:O86603 (EMBL:AL031155) Streptomyces coelicolor transcriptional regulator SC3A7.02c%2C 892 aa%3B blastp scores: Score %3D 148 (52.1 bits)%2C Expect %3D 6.7e-07%2C P %3D 6.7e-07%3B Identities %3D 98/317 (30%25)%2C Positives %3D 130/317 (41%25). Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and 4x matches to entry PF00515 TPR%2C TPR Domain;gbkey=CDS;gene=SCH63.29c;product=regulatory protein;protein_id=NP_627972.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4158625	4158726	.	-	.	ID=id4710;Dbxref=GeneID:1099218;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 8.10%2C E-value 6.5;gbkey=misc_feature;gene=SCH63.29c
NC_003888.3	RefSeq	sequence_feature	4158745	4158846	.	-	.	ID=id4711;Dbxref=GeneID:1099218;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 14.90%2C E-value 1.2;gbkey=misc_feature;gene=SCH63.29c
NC_003888.3	RefSeq	sequence_feature	4159105	4159206	.	-	.	ID=id4712;Dbxref=GeneID:1099218;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 4.10%2C E-value 17;gbkey=misc_feature;gene=SCH63.29c
NC_003888.3	RefSeq	sequence_feature	4159474	4159575	.	-	.	ID=id4713;Dbxref=GeneID:1099218;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 3.20%2C E-value 22;gbkey=misc_feature;gene=SCH63.29c
NC_003888.3	RefSeq	sequence_feature	4159729	4159890	.	-	.	ID=id4714;Dbxref=GeneID:1099218;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 43.70%2C E-value 4.2e-09;gbkey=misc_feature;gene=SCH63.29c
NC_003888.3	RefSeq	ribosome_entry_site	4159935	4159939	.	-	.	ID=id4715;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4160033	4160036	.	+	.	ID=id4716;gbkey=RBS
NC_003888.3	RefSeq	gene	4160042	4160218	.	+	.	ID=gene3809;Dbxref=GeneID:1099219;Name=SCH63.30;gbkey=Gene;gene=SCH63.30;gene_biotype=protein_coding;gene_synonym=SCH63.30;locus_tag=SCO3783
NC_003888.3	RefSeq	CDS	4160042	4160218	.	+	0	ID=cds3737;Parent=gene3809;Dbxref=Genbank:NP_627973.1,GeneID:1099219;Name=NP_627973.1;Note=SCH63.30%2C possible lipoprotein%2C len: 58 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH63.30;product=lipoprotein;protein_id=NP_627973.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4160081	4160113	.	+	.	ID=id4717;Dbxref=GeneID:1099219;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCH63.30
NC_003888.3	RefSeq	gene	4160268	4161347	.	-	.	ID=gene3810;Dbxref=GeneID:1099220;Name=SCH63.31c;gbkey=Gene;gene=SCH63.31c;gene_biotype=protein_coding;gene_synonym=SCH63.31c;locus_tag=SCO3784
NC_003888.3	RefSeq	CDS	4160268	4161347	.	-	0	ID=cds3738;Parent=gene3810;Dbxref=Genbank:NP_627974.1,GeneID:1099220;Name=NP_627974.1;Note=SCH63.31c%2C unknown%2C len: 359 aa. High content in alanine%2C leucine and arginine amino acid residues. Also high content in G+C (79.48%25);gbkey=CDS;gene=SCH63.31c;product=hypothetical protein;protein_id=NP_627974.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4161358	4161362	.	-	.	ID=id4718;gbkey=RBS
NC_003888.3	RefSeq	gene	4161431	4162660	.	-	.	ID=gene3811;Dbxref=GeneID:1099221;Name=SCH63.32c;gbkey=Gene;gene=SCH63.32c;gene_biotype=protein_coding;gene_synonym=SCH63.32c;locus_tag=SCO3785
NC_003888.3	RefSeq	CDS	4161431	4162660	.	-	0	ID=cds3739;Parent=gene3811;Dbxref=Genbank:NP_627975.1,GeneID:1099221;Name=NP_627975.1;Note=SCH63.32c%2C possible integral membrane protein%2C len: 409 aa%3B similar to TR:CAB95784 (EMBL:AL359949) Streptomyces coelicolor  integral membrane protein 2SCG61.09%2C 387 aa%3B fasta scores: opt: 464 z-score: 500.7 E(): 2.3e-20%3B 32.5%25 identity in 379 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.32c;product=hypothetical protein;protein_id=NP_627975.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4162667	4162670	.	-	.	ID=id4719;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4162773	4162777	.	+	.	ID=id4720;gbkey=RBS
NC_003888.3	RefSeq	gene	4162785	4163303	.	+	.	ID=gene3812;Dbxref=GeneID:1099222;Name=SCH63.33;gbkey=Gene;gene=SCH63.33;gene_biotype=protein_coding;gene_synonym=SCH63.33;locus_tag=SCO3786
NC_003888.3	RefSeq	CDS	4162785	4163303	.	+	0	ID=cds3740;Parent=gene3812;Dbxref=Genbank:NP_627976.1,GeneID:1099222;Name=NP_627976.1;Note=SCH63.33%2C possible integral membrane protein%2C len: 172 aa%3B low similarity to TR:O86915 (EMBL:Y15759) Streptomyces rochei ORFA protein (fragment)%2C 128 aa%3B fasta scores: opt: 221 z-score: 269.8 E(): 1.6e-07%3B 33.0%25 identity in 109 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.33;product=hypothetical protein;protein_id=NP_627976.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4162803	4162883	.	+	.	ID=id4721;Dbxref=GeneID:1099222;Note=region rich in arginine%2C threonine and glycine amino acid residues;gbkey=misc_feature;gene=SCH63.33
NC_003888.3	RefSeq	gene	4163376	4164320	.	+	.	ID=gene3813;Dbxref=GeneID:1099223;Name=SCH63.34;gbkey=Gene;gene=SCH63.34;gene_biotype=protein_coding;gene_synonym=SCH63.34;locus_tag=SCO3787
NC_003888.3	RefSeq	CDS	4163376	4164320	.	+	0	ID=cds3741;Parent=gene3813;Dbxref=Genbank:NP_627977.1,GeneID:1099223;Name=NP_627977.1;Note=SCH63.34%2C possible integral membrane protein%2C len: 314 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.34;product=hypothetical protein;protein_id=NP_627977.1;transl_table=11
NC_003888.3	RefSeq	gene	4164327	4164737	.	+	.	ID=gene3814;Dbxref=GeneID:1099224;Name=SCH63.35;gbkey=Gene;gene=SCH63.35;gene_biotype=protein_coding;gene_synonym=SCH63.35;locus_tag=SCO3788
NC_003888.3	RefSeq	CDS	4164327	4164737	.	+	0	ID=cds3742;Parent=gene3814;Dbxref=Genbank:NP_627978.1,GeneID:1099224;Name=NP_627978.1;Note=SCH63.35%2C unknown%2C len: 136 aa%3B similar to TR:Q98LX4 (EMBL:AP002995) hypothetical protein from Rhizobium loti (Mesorhizobium loti) (71 aa) fasta scores%3B 78.689%25 identity (78.689%25 ungapped) in 61 aa overlap.;gbkey=CDS;gene=SCH63.35;product=hypothetical protein;protein_id=NP_627978.1;transl_table=11
NC_003888.3	RefSeq	gene	4164773	4165789	.	+	.	ID=gene3815;Dbxref=GeneID:1099225;Name=SCH63.36;gbkey=Gene;gene=SCH63.36;gene_biotype=protein_coding;gene_synonym=SCH63.36;locus_tag=SCO3789
NC_003888.3	RefSeq	CDS	4164773	4165789	.	+	0	ID=cds3743;Parent=gene3815;Dbxref=Genbank:NP_627979.1,GeneID:1099225;Name=NP_627979.1;Note=SCH63.36%2C possible integral membrane protein%2C len: 338 aa%3B similar to TR:Q9RS34 (EMBL:AE002061) Deinococcus radiodurans conserved hypothetical protein DR2293%2C 322 aa%3B fasta scores: opt: 233 z-score: 262.7 E(): 4.1e-07%3B 34.9%25 identity in 304 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH63.36;product=hypothetical protein;protein_id=NP_627979.1;transl_table=11
NC_003888.3	RefSeq	gene	4165816	4167894	.	-	.	ID=gene3816;Dbxref=GeneID:1099226;Name=SCH63.37c;gbkey=Gene;gene=SCH63.37c;gene_biotype=protein_coding;gene_synonym=SCH63.37c;locus_tag=SCO3790
NC_003888.3	RefSeq	CDS	4165816	4167894	.	-	0	ID=cds3744;Parent=gene3816;Dbxref=Genbank:NP_627980.1,GeneID:1099226;Name=NP_627980.1;Note=SCH63.37c%2C conserved hypothetical protein%2C len: 693 aa%3B similar to TR:AAF95947 (EMBL:AE004347) Vibrio cholerae hypothetical 68.9 kDa protein VCA0033%2C 624 aa%3B fasta scores: opt: 936 z-score: 990.2 E(): 0%3B 39.4%25 identity in 670 aa overlap;gbkey=CDS;gene=SCH63.37c;product=hypothetical protein;protein_id=NP_627980.1;transl_table=11
NC_003888.3	RefSeq	gene	4168158	4169495	.	+	.	ID=gene3817;Dbxref=GeneID:1099227;Name=SCH63.38;gbkey=Gene;gene=SCH63.38;gene_biotype=protein_coding;gene_synonym=SCH63.38;locus_tag=SCO3791
NC_003888.3	RefSeq	CDS	4168158	4169495	.	+	0	ID=cds3745;Parent=gene3817;Dbxref=Genbank:NP_627981.1,GeneID:1099227;Name=NP_627981.1;Note=SCH63.38%2C hypothetical protein%2C len: 445 aa%3B C-terminal region similar to TR:Q9S2I1 (EMBL:AL109732) Streptomyces coelicolor hypothetical protein SC7H2.36c%2C 252 aa%3B fsta scores: opt: 620 Z-score: 451.7 E(): 1.6e-17%3B 45.175%25 identity in 228 aa overlap;gbkey=CDS;gene=SCH63.38;product=hypothetical protein;protein_id=NP_627981.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4168419	4168763	.	+	.	ID=id4722;Dbxref=GeneID:1099227;Note=region rich in alanine%2C glutamic acid and proline amino acids residues;gbkey=misc_feature;gene=SCH63.38
NC_003888.3	RefSeq	stem_loop	4169525	4169566	.	+	.	ID=id4723;Note=possible stem loop. Score 53: 19/20 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	4169599	4169602	.	+	.	ID=id4724;gbkey=RBS
NC_003888.3	RefSeq	gene	4169611	4171227	.	+	.	ID=gene3818;Dbxref=GeneID:1099228;Name=SCH63.39;gbkey=Gene;gene=SCH63.39;gene_biotype=protein_coding;gene_synonym=SCH63.39;locus_tag=SCO3792
NC_003888.3	RefSeq	CDS	4169611	4171227	.	+	0	ID=cds3746;Parent=gene3818;Dbxref=Genbank:NP_627982.1,GeneID:1099228;Name=NP_627982.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=SCH63.39;product=methionyl-tRNA synthetase;protein_id=NP_627982.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4169629	4170849	.	+	.	ID=id4725;Dbxref=GeneID:1099228;Note=Pfam match to entry PF00133 tRNA-synt_1%2C tRNA synthetases class I (I%2C L%2C M and V)%2C score -136.10%2C E-value 8.9e-10;gbkey=misc_feature;gene=SCH63.39
NC_003888.3	RefSeq	stem_loop	4171233	4171290	.	+	.	ID=id4726;Note=possible stem loop. Score 53: 23/27 (85%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4171328	4171693	.	+	.	ID=gene3819;Dbxref=GeneID:1099229;Name=SCAC2.01;gbkey=Gene;gene=SCAC2.01;gene_biotype=protein_coding;gene_synonym=SCAC2.01;locus_tag=SCO3793
NC_003888.3	RefSeq	CDS	4171328	4171693	.	+	0	ID=cds3747;Parent=gene3819;Dbxref=Genbank:NP_627983.1,GeneID:1099229;Name=NP_627983.1;Note=SCAC2.01%2C conserved hypothetical protein%2C len: 121 aa%3B similar to TR:O34593 (EMBL:Z99110) Bacillus subtilis YjqA protein%2C 125 aa%3B fasta scores: opt: 459 z-score: 636.3 E(): 6.2e-28%3B 60.5%25 identity in 114 aa overlap;gbkey=CDS;gene=SCAC2.01;product=hypothetical protein;protein_id=NP_627983.1;transl_table=11
NC_003888.3	RefSeq	gene	4171889	4172662	.	-	.	ID=gene3820;Dbxref=GeneID:1099230;Name=SCAC2.02c;gbkey=Gene;gene=SCAC2.02c;gene_biotype=protein_coding;gene_synonym=SCAC2.02c;locus_tag=SCO3794
NC_003888.3	RefSeq	CDS	4171889	4172662	.	-	0	ID=cds3748;Parent=gene3820;Dbxref=Genbank:NP_627984.1,GeneID:1099230;Name=NP_627984.1;Note=SCAC2.02c%2C probable glycosyl transferase%2C len: 257 aa%3B similar to TR:BAB07380 (EMBL:AP001519) Bacillus halodurans teichuronic acid biosynthesis TuaG%2C 257 aa%3B fasta scores: opt: 624 z-score: 745.5 E(): 0%3B 41.3%25 identity in 252 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=SCAC2.02c;product=glycosyl transferase;protein_id=NP_627984.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4172144	4172650	.	-	.	ID=id4727;Dbxref=GeneID:1099230;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 86.50%2C E-value 5.5e-22;gbkey=misc_feature;gene=SCAC2.02c
NC_003888.3	RefSeq	ribosome_entry_site	4172670	4172675	.	-	.	ID=id4728;gbkey=RBS
NC_003888.3	RefSeq	gene	4172747	4174510	.	-	.	ID=gene3821;Dbxref=GeneID:1099231;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;gene_synonym=SCAC2.03c;locus_tag=SCO3795
NC_003888.3	RefSeq	CDS	4172747	4174510	.	-	0	ID=cds3749;Parent=gene3821;Dbxref=Genbank:NP_627985.1,GeneID:1099231;Name=NP_627985.1;Note=catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=NP_627985.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4172840	4174150	.	-	.	ID=id4729;Dbxref=GeneID:1099231;Note=Pfam match to entry PF00152 tRNA-synt_2%2C tRNA synthetases class II (D%2C K and N)%2C score -8.30%2C E-value 3.6e-11;gbkey=misc_feature;gene=aspS
NC_003888.3	RefSeq	sequence_feature	4174199	4174450	.	-	.	ID=id4730;Dbxref=GeneID:1099231;Note=Pfam match to entry PF01336 tRNA_anti%2C tRNA synthetase anti-codon binding domain%2C score 85.60%2C E-value 1e-21;gbkey=misc_feature;gene=aspS
NC_003888.3	RefSeq	ribosome_entry_site	4174517	4174522	.	-	.	ID=id4731;gbkey=RBS
NC_003888.3	RefSeq	gene	4174717	4176885	.	+	.	ID=gene3822;Dbxref=GeneID:1099232;Name=SCAC2.04;gbkey=Gene;gene=SCAC2.04;gene_biotype=protein_coding;gene_synonym=SCAC2.04;locus_tag=SCO3796
NC_003888.3	RefSeq	CDS	4174717	4176885	.	+	0	ID=cds3750;Parent=gene3822;Dbxref=Genbank:NP_627986.1,GeneID:1099232;Name=NP_627986.1;Note=SCAC2.04%2C hypothetical protein%2C len: 722 aa%3B similar to TR:Q9RIW0 (EMBL:AL133278) Streptomyces coelicolor hypothetical 64.1 kDa protein (fragment) SCM11.01c%2C 588 aa%3B fasta scores: opt: 1053 z-score: 1177.1 E(): 0%3B 35.8%25 identity in 598 aa overlap;gbkey=CDS;gene=SCAC2.04;product=hypothetical protein;protein_id=NP_627986.1;transl_table=11
NC_003888.3	RefSeq	gene	4176813	4177901	.	-	.	ID=gene3823;Dbxref=GeneID:1099233;Name=SCAC2.05c;gbkey=Gene;gene=SCAC2.05c;gene_biotype=protein_coding;gene_synonym=SCAC2.05c;locus_tag=SCO3797
NC_003888.3	RefSeq	CDS	4176813	4177901	.	-	0	ID=cds3751;Parent=gene3823;Dbxref=Genbank:NP_627987.1,GeneID:1099233;Name=NP_627987.1;Note=SCAC2.05c%2C possible integral membrane protein%2C len: 362 aa%3B similar to TR:O53656 (EMBL:AL021928) Mycobacterium tuberculosis hypothetical 38.0 kDa protein MTV033.13%2C 367 aa%3B fasta scores: opt: 586 z-score: 618.4 E(): 6.1e-27%3B 34.8%25 identity in 325 aa overlap. Contains Pfam match to entry PF01594 UPF0118%2C Domain of unknown function DUF20 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCAC2.05c;product=hypothetical protein;protein_id=NP_627987.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4176891	4177868	.	-	.	ID=id4732;Dbxref=GeneID:1099233;Note=Pfam match to entry PF01594 UPF0118%2C Domain of unknown function DUF20%2C score 180.30%2C E-value 3.2e-50;gbkey=misc_feature;gene=SCAC2.05c
NC_003888.3	RefSeq	gene	4177967	4178944	.	-	.	ID=gene3824;Dbxref=GeneID:1099234;Name=SCAC2.06c;gbkey=Gene;gene=SCAC2.06c;gene_biotype=protein_coding;gene_synonym=SCAC2.06c;locus_tag=SCO3798
NC_003888.3	RefSeq	CDS	4177967	4178944	.	-	0	ID=cds3752;Parent=gene3824;Dbxref=Genbank:NP_627988.1,GeneID:1099234;Name=NP_627988.1;Note=SCAC2.06c%2C possible chromosome condensation protein%2C len: 325 aa%3B similar to many eukaryote Pirin-like proteins%2C e.g. TR:O00625 (EMBL:Y07868) Homo sapiens Pirin%2C 290 aa%3B fasta scores: opt: 353 z-score: 412.8 E(): 1.7e-15%3B 38.6%25 identity in 277 aa overlap. Contains match to Prosite entry PS00626 Regulator of chromosome condensation (RCC1) signature 2 and the actinophage PhiC31 left and right junctions attachment site%2C attB;gbkey=CDS;gene=SCAC2.06c;product=chromosome condensation protein;protein_id=NP_627988.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4178513	4178545	.	-	.	ID=id4733;Dbxref=GeneID:1099234;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2;gbkey=misc_feature;gene=SCAC2.06c
NC_003888.3	RefSeq	sequence_feature	4178666	4178950	.	-	.	ID=id4734;Note=EMBL:X60953 Streptomyces coelicolor actinophage phiC31 left and right junctions attachment site;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	4178949	4178955	.	-	.	ID=id4735;gbkey=RBS
NC_003888.3	RefSeq	gene	4179065	4179535	.	-	.	ID=gene3825;Dbxref=GeneID:1099235;Name=SCAC2.07c;gbkey=Gene;gene=SCAC2.07c;gene_biotype=protein_coding;gene_synonym=SCAC2.07c;locus_tag=SCO3799
NC_003888.3	RefSeq	CDS	4179065	4179535	.	-	0	ID=cds3753;Parent=gene3825;Dbxref=Genbank:NP_627989.1,GeneID:1099235;Name=NP_627989.1;Note=SCAC2.07c%2C unknown%2C len: 156 aa;gbkey=CDS;gene=SCAC2.07c;product=hypothetical protein;protein_id=NP_627989.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4179416	4179508	.	-	.	ID=id4736;Dbxref=GeneID:1099235;Note=high content in glutamine and proline amino acid residues;gbkey=misc_feature;gene=SCAC2.07c
NC_003888.3	RefSeq	ribosome_entry_site	4179673	4179676	.	+	.	ID=id4737;gbkey=RBS
NC_003888.3	RefSeq	gene	4179684	4181510	.	+	.	ID=gene3826;Dbxref=GeneID:1099236;Name=SCAC2.08;gbkey=Gene;gene=SCAC2.08;gene_biotype=protein_coding;gene_synonym=SCAC2.08,SCGD3.01;locus_tag=SCO3800
NC_003888.3	RefSeq	CDS	4179684	4181510	.	+	0	ID=cds3754;Parent=gene3826;Dbxref=Genbank:NP_733617.1,GeneID:1099236;Name=NP_733617.1;Note=SCGD3.01%2C possible acyl-CoA dehydrogenase%2C partial CDS%2C len: >491 aa%3B weakly similar to TR:P97088 (EMBL:Z92974)%2C bcd%2C Clostridium thermosaccharolyticum butyryl-CoA dehydrogenase (379 aa)%2C fasta scores%3B opt: 176 z-score: 203.7 E(): 0.00051%2C 28.0%25 identity in 318 aa overlap. Also highly similar to acyl-CoA dehydrogenases from mycobacteria e.g. TR:O69506 (EMBL:AL022486) Mycobacterium leprae probable acyl-CoA dehydrogenase (611 aa) (64.3%25 identity in 493 aa overlap). Contains two Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase~SCAC2.08%2C possible dehydrogenase (fragment)%2C len: >149 aa%3B similar to N-terminal region of TR:O53666 (EMBL:AL021929%3B) Mycobacterium tuberculosis acyl-CoA dehydrogenase MTV034.10c%2C 611 aa%3B fasta scores: opt: 547 z-score: 662.5 E(): 2.1e-29%3B 52.4%25 identity in 147 aa overlap;gbkey=CDS;gene=SCAC2.08;product=acyl-CoA dehydrogenase;protein_id=NP_733617.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4180173	4180499	.	+	.	ID=id4738;Dbxref=GeneID:1099236;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 47.80%2C E-value 3.4e-13;gbkey=misc_feature;gene=SCAC2.08
NC_003888.3	RefSeq	sequence_feature	4180923	4181036	.	+	.	ID=id4739;Dbxref=GeneID:1099236;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 32.10%2C E-value 1.4e-08;gbkey=misc_feature;gene=SCAC2.08
NC_003888.3	RefSeq	gene	4181609	4182907	.	+	.	ID=gene3827;Dbxref=GeneID:1099237;Name=SCGD3.02;gbkey=Gene;gene=SCGD3.02;gene_biotype=protein_coding;gene_synonym=SCGD3.02;locus_tag=SCO3801
NC_003888.3	RefSeq	CDS	4181609	4182907	.	+	0	ID=cds3755;Parent=gene3827;Dbxref=Genbank:NP_627990.1,GeneID:1099237;Name=NP_627990.1;Note=catalyzes the removal of amino acids from the N termini of peptides;gbkey=CDS;gene=SCGD3.02;product=aminopeptidase 2;protein_id=NP_627990.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4183009	4183013	.	+	.	ID=id4740;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4183022	4183273	.	+	.	ID=gene3828;Dbxref=GeneID:1099238;Name=SCGD3.03;gbkey=Gene;gene=SCGD3.03;gene_biotype=protein_coding;gene_synonym=SCGD3.03;locus_tag=SCO3802
NC_003888.3	RefSeq	CDS	4183022	4183273	.	+	0	ID=cds3756;Parent=gene3828;Dbxref=Genbank:NP_627991.1,GeneID:1099238;Name=NP_627991.1;Note=SCGD3.03%2C possible membrane protein%2C len: 83 aa%3B probable CDS suggested by probable CDS suggested by positional base preference%2C GC frame analysis and the presence of a possible RBS. Hydrophobic%2C apart from the C-terminal region;gbkey=CDS;gene=SCGD3.03;product=hypothetical protein;protein_id=NP_627991.1;transl_table=11
NC_003888.3	RefSeq	gene	4183333	4183737	.	-	.	ID=gene3829;Dbxref=GeneID:1099239;Name=SCGD3.04c;gbkey=Gene;gene=SCGD3.04c;gene_biotype=protein_coding;gene_synonym=SCGD3.04c;locus_tag=SCO3803
NC_003888.3	RefSeq	CDS	4183333	4183737	.	-	0	ID=cds3757;Parent=gene3829;Dbxref=Genbank:NP_627992.1,GeneID:1099239;Name=NP_627992.1;Note=SCGD3.04c%2C hypothetical protein%2C len: 134 aa%3B shows similarity to TR:P96597 (EMBL:AB001488)%2C YdbB%2C Bacillus subtilis hypothetical protein (113 aa)%2C fasta scores%3B E(): 2.8e-05%2C 35.6%25 identity in 87 aa overlap and to hypothetical proteins from Neisseria meningitidis serogroup A%2C e.g. NMA0576%2C hypothetical protein (107 aa)%2C blastp scores: Expect%3D 4.6e-11. Probable member of the cupin superfamily;gbkey=CDS;gene=SCGD3.04c;product=hypothetical protein;protein_id=NP_627992.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4183573	4183612	.	+	.	ID=id4741;Note=repeat 3%3B imperfect 40 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4183789	4184793	.	+	.	ID=gene3830;Dbxref=GeneID:1099240;Name=SCGD3.05;gbkey=Gene;gene=SCGD3.05;gene_biotype=protein_coding;gene_synonym=SCGD3.05;locus_tag=SCO3804
NC_003888.3	RefSeq	CDS	4183789	4184793	.	+	0	ID=cds3758;Parent=gene3830;Dbxref=Genbank:NP_627993.1,GeneID:1099240;Name=NP_627993.1;Note=SCGD3.05%2C probable araC-family transcriptional regulator%2C len: 334 aa%3B probable araC-type regulator similar to many e.g. TR:O30507 (EMBL:AF008308)%2C ArgR%2C Pseudomonas aeruginosa arginine regulatory protein (328 aa)%2C fasta scores%3B opt: 398 z-score: 463.6 E(): 1.7e-18%2C 30.8%25 identity in 334 aa overlap. Similar to others from S.coelicolor e.g. (EMBL:AL049587)%2C SC5F2A.29%2C S.coelicolor possible transcriptional regulator (325 aa) (37.6%25 identity in 314 aa overlap). Contains probable helix-turn-helix motif at aa 240-261 (Score 1477%2C +4.22 SD). A second%2C less probable motif is at aa 305-326 (Score 1090%2C +2.90 SD). Contains Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family;gbkey=CDS;gene=SCGD3.05;product=AraC family transcription regulator;protein_id=NP_627993.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4184500	4184760	.	+	.	ID=id4742;Dbxref=GeneID:1099240;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 67.70%2C E-value 2.5e-16;gbkey=misc_feature;gene=SCGD3.05
NC_003888.3	RefSeq	gene	4184790	4185284	.	+	.	ID=gene3831;Dbxref=GeneID:1099241;Name=SCGD3.06;gbkey=Gene;gene=SCGD3.06;gene_biotype=protein_coding;gene_synonym=SCGD3.06;locus_tag=SCO3805
NC_003888.3	RefSeq	CDS	4184790	4185284	.	+	0	ID=cds3759;Parent=gene3831;Dbxref=Genbank:NP_627994.1,GeneID:1099241;Name=NP_627994.1;Note=SCGD3.06%2C hypothetical protein%2C len: 164 aa%3B unknown function%2C weakly similar to TR:P94352 (EMBL:D83026) Bacillus subtilis hypothetical protein (162 aa)%2C fasta scores%3B opt: 185 z-score: 240.2 E(): 4.7e-06%2C 21.8%25 identity in 165 aa overlap. An alternative start codon is present at codon 5;gbkey=CDS;gene=SCGD3.06;product=hypothetical protein;protein_id=NP_627994.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4184837	4184876	.	-	.	ID=id4743;Note=repeat 3%3B imperfect 40 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4185307	4185765	.	-	.	ID=gene3832;Dbxref=GeneID:1099242;Name=SCGD3.07c;gbkey=Gene;gene=SCGD3.07c;gene_biotype=protein_coding;gene_synonym=SCGD3.07c;locus_tag=SCO3806
NC_003888.3	RefSeq	CDS	4185307	4185765	.	-	0	ID=cds3760;Parent=gene3832;Dbxref=Genbank:NP_627995.1,GeneID:1099242;Name=NP_627995.1;Note=SCGD3.07c%2C hypothetical protein%2C len: 152 aa%3B unknown function%2C probable CDS suggested by probable CDS suggested by positional base preference and GC frame analysis;gbkey=CDS;gene=SCGD3.07c;product=hypothetical protein;protein_id=NP_627995.1;transl_table=11
NC_003888.3	RefSeq	gene	4185833	4186627	.	-	.	ID=gene3833;Dbxref=GeneID:1099243;Name=SCGD3.08c;gbkey=Gene;gene=SCGD3.08c;gene_biotype=protein_coding;gene_synonym=SCGD3.08c;locus_tag=SCO3807
NC_003888.3	RefSeq	CDS	4185833	4186627	.	-	0	ID=cds3761;Parent=gene3833;Dbxref=Genbank:NP_627996.1,GeneID:1099243;Name=NP_627996.1;Note=SCGD3.08c%2C possible hydrolase%2C len: 264 aa%3B weakly similar to hydrolases e.g. to TR:Q44185 (EMBL:X91070) Agrobacterium radiobacter D-N-alpha-carbamilase (304 aa) (28.17%25 identity in 252 aa overlap). Similar to many hypothetical proteins e.g. TR:O27839 (EMBL:AE000934) Methanobacterium thermoautotrophicum  N-carbamoyl-D-amino acid amidohydrolase (272 aa) (36.2%25 identity in 265 aa overlap). Similar to others from S.coelicolor e.g. TR:O69808 (EMBL:AL023496) S.coelicolor possible hydrolase (280 aa) (31.7%25 identity in 281 aa overlap). An alternative start codon is present at codon 10. Contains PS01227 Uncharacterized protein family UPF0012 signature which is also present in many of the hypothetical proteins similar to this one;gbkey=CDS;gene=SCGD3.08c;product=hydrolase;protein_id=NP_627996.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4186142	4186204	.	-	.	ID=id4744;Dbxref=GeneID:1099243;Note=PS01227 Uncharacterized protein family UPF0012 signature;gbkey=misc_feature;gene=SCGD3.08c
NC_003888.3	RefSeq	gene	4186809	4187633	.	+	.	ID=gene3834;Dbxref=GeneID:1099244;Name=SCGD3.09;gbkey=Gene;gene=SCGD3.09;gene_biotype=protein_coding;gene_synonym=SCGD3.09;locus_tag=SCO3808
NC_003888.3	RefSeq	CDS	4186809	4187633	.	+	0	ID=cds3762;Parent=gene3834;Dbxref=Genbank:NP_627997.1,GeneID:1099244;Name=NP_627997.1;Note=SCGD3.09%2C hypothetical protein%2C len: 274 aa%3B unknown function%2C similar to TR:O05777 (EMBL:Z95150) Mycobacterium tuberculosis hypothetical protein (283 aa)%2C fasta scores%3B opt: 384 z-score: 466.0 E(): 1.3e-18%2C 32.7%25 identity in 269 aa overlap;gbkey=CDS;gene=SCGD3.09;product=hypothetical protein;protein_id=NP_627997.1;transl_table=11
NC_003888.3	RefSeq	gene	4187758	4189068	.	-	.	ID=gene3835;Dbxref=GeneID:1099245;Name=SCGD3.10c;gbkey=Gene;gene=SCGD3.10c;gene_biotype=protein_coding;gene_synonym=SCGD3.10c;locus_tag=SCO3809
NC_003888.3	RefSeq	CDS	4187758	4189068	.	-	0	ID=cds3763;Parent=gene3835;Dbxref=Genbank:NP_627998.1,GeneID:1099245;Name=NP_627998.1;Note=SCGD3.10c%2C probable transmembrane transport protein%2C len: 436 aa%3B similar to several hypothetical transporters and weakly similar to TR:O54041 (EMBL:Y15252)%2C narK1%2C Pseudomonas aeruginosa nitrate extrusion protein (341 aa)%2C fasta scores%3B opt: 243 z-score: 275.0 E(): 5.5e-08%2C 24.9%25 identity in 422 aa overlap. Weakly similar to many from S.coelicolor e.g. (EMBL:AL034443)%2C SC4B5.13%2C probable integral membrane transporter (446 aa) (24.6%25 identity in 345 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter;gbkey=CDS;gene=SCGD3.10c;product=transmembrane transport protein;protein_id=NP_627998.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4187812	4188996	.	-	.	ID=id4745;Dbxref=GeneID:1099245;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -90.70%2C E-value 0.007;gbkey=misc_feature;gene=SCGD3.10c
NC_003888.3	RefSeq	gene	4189065	4189715	.	-	.	ID=gene3836;Dbxref=GeneID:1099246;Name=SCGD3.11c;gbkey=Gene;gene=SCGD3.11c;gene_biotype=protein_coding;gene_synonym=SCGD3.11c;locus_tag=SCO3810
NC_003888.3	RefSeq	CDS	4189065	4189715	.	-	0	ID=cds3764;Parent=gene3836;Dbxref=Genbank:NP_627999.1,GeneID:1099246;Name=NP_627999.1;Note=SCGD3.11c%2C probable gntR-family transcriptional regulator%2C len: 216 aa%3B similar to many e.g. SW:GNTR_BACSU (EMBL:J02584)%2C GntR%2C Bacillus subtilis gluconate operon transcriptional repressor (243 aa)%2C fasta scores%3B opt: 228 z-score: 274.3 E(): 5.9e-08%2C 28.5%25 identity in 186 aa overlap. Also similar to others from S.coelicolor (EMBL:AL034443) S.coelicolor probable transcriptional regulator (225 aa) (33.6%25 identity in 214 aa overlap). Contains probable helix-turn-helix motif at aa 34-55 (Score 991%2C +2.56 SD). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=CDS;gene=SCGD3.11c;product=GntR family transcriptional regulator;protein_id=NP_627999.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4189314	4189356	.	+	.	ID=id4746;Note=repeat 4%3B imperfect 42 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4189500	4189676	.	-	.	ID=id4747;Dbxref=GeneID:1099246;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 49.20%2C E-value 1.2e-13;gbkey=misc_feature;gene=SCGD3.11c
NC_003888.3	RefSeq	sequence_feature	4189548	4189622	.	-	.	ID=id4748;Dbxref=GeneID:1099246;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCGD3.11c
NC_003888.3	RefSeq	gene	4189937	4190881	.	+	.	ID=gene3837;Dbxref=GeneID:1099247;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;gene_synonym=dacA,SCGD3.12;locus_tag=SCO3811
NC_003888.3	RefSeq	CDS	4189937	4190881	.	+	0	ID=cds3765;Parent=gene3837;Dbxref=Genbank:NP_628000.1,GeneID:1099247;Name=NP_628000.1;Note=SCGD3.12%2C dacA%2C probable D-alanyl-D-alanine carboxypeptidase%2C len: 314 aa%3B highly similar to SW:DACX_STRSK (EMBL:X59965) Streptomyces sp. (strain K15) D-alanyl-D-alanine carboxypeptidase (291 aa)%2C fasta scores%3B opt: 1322 z-score: 1435.8 E(): 0%2C 73.8%25 identity in 302 aa overlap. Also similar to many other penicillin-binding proteins. Contains Pfam match to entry PF00768 Peptidase_S11%2C D-alanyl-D-alanine carboxypeptidase and PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=dacA;product=D-alanyl-D-alanine carboxypeptidase;protein_id=NP_628000.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4190017	4190059	.	-	.	ID=id4749;Note=repeat 4%3B imperfect 42 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4190078	4190875	.	+	.	ID=id4750;Dbxref=GeneID:1099247;Note=Pfam match to entry PF00768 Peptidase_S11%2C D-alanyl-D-alanine carboxypeptidase%2C score 353.50%2C E-value 2.3e-102;gbkey=misc_feature;gene=dacA
NC_003888.3	RefSeq	sequence_feature	4190771	4190794	.	+	.	ID=id4751;Dbxref=GeneID:1099247;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=dacA
NC_003888.3	RefSeq	gene	4190999	4191346	.	+	.	ID=gene3838;Dbxref=GeneID:1099248;Name=SCGD3.13;gbkey=Gene;gene=SCGD3.13;gene_biotype=protein_coding;gene_synonym=SCGD3.13;locus_tag=SCO3812
NC_003888.3	RefSeq	CDS	4190999	4191346	.	+	0	ID=cds3766;Parent=gene3838;Dbxref=Genbank:NP_628001.1,GeneID:1099248;Name=NP_628001.1;Note=SCGD3.13%2C probable gntR-family transcriptional regulator%2C len: 115 aa%3B weakly similar to several transcriptional regulators e.g. to the N-terminal half of TR:O70026 (EMBL:X80774)%2C traR%2C transcriptional repressor of TraB from Streptomyces ghanaensis plasmid pSG5 (246 aa)%2C fasta scores%3B opt: 173 z-score: 224.1 E(): 3.7e-05%2C 35.6%25 identity in 87 aa overlap. Similar to TR:O34712 (EMBL:AF008220) Bacillus subtilis transcription regulator (130 aa) (28.2%25 identity in 117 aa overlap). Weakly similar to many from S.coelicolor e.g. (EMBL:AL049573)%2C SCE39.19%2C possible gntR-family regulator (251 aa) (37.1%25 identity in 97 aa overlap). Contains probable helix-turn-helix motif at aa 38-59 (Score 1394%2C +3.93 SD). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCGD3.13;product=GntR family transcriptional regulator;protein_id=NP_628001.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4191047	4191226	.	+	.	ID=id4752;Dbxref=GeneID:1099248;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 60.70%2C E-value 3.2e-17;gbkey=misc_feature;gene=SCGD3.13
NC_003888.3	RefSeq	gene	4191343	4192329	.	+	.	ID=gene3839;Dbxref=GeneID:1099249;Name=SCGD3.14;gbkey=Gene;gene=SCGD3.14;gene_biotype=protein_coding;gene_synonym=SCGD3.14;locus_tag=SCO3813
NC_003888.3	RefSeq	CDS	4191343	4192329	.	+	0	ID=cds3767;Parent=gene3839;Dbxref=Genbank:NP_628002.1,GeneID:1099249;Name=NP_628002.1;Note=SCGD3.14%2C possible membrane protein%2C len: 328 aa%3B unknown function%2C probable CDS suggested by probable CDS suggested by positional base preference and GC frame analysis. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCGD3.14;product=hypothetical protein;protein_id=NP_628002.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4192464	4192468	.	+	.	ID=id4753;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4192477	4193454	.	+	.	ID=gene3840;Dbxref=GeneID:1099250;Name=SCGD3.15;gbkey=Gene;gene=SCGD3.15;gene_biotype=protein_coding;gene_synonym=SCGD3.15;locus_tag=SCO3814
NC_003888.3	RefSeq	CDS	4192477	4193454	.	+	0	ID=cds3768;Parent=gene3840;Dbxref=Genbank:NP_628003.1,GeneID:1099250;Name=NP_628003.1;Note=SCGD3.15%2C possible DNA-binding protein%2C len: 325 aa%3B unknown function%2C probable CDS suggested by probable CDS suggested by positional base preference%2C GC frame analysis%2C amino acid composition and the presence of a possible RBS. Possible DNA-binding function as it contains a probable helix-turn-helix motif at aa 279-300 (Score 1121%2C +3.00 SD);gbkey=CDS;gene=SCGD3.15;product=DNA-binding protein;protein_id=NP_628003.1;transl_table=11
NC_003888.3	RefSeq	gene	4193532	4194941	.	-	.	ID=gene3841;Dbxref=GeneID:1099251;Name=bkdC1;gbkey=Gene;gene=bkdC1;gene_biotype=protein_coding;gene_synonym=bkdC1,SCGD3.16c;locus_tag=SCO3815
NC_003888.3	RefSeq	CDS	4193532	4194941	.	-	0	ID=cds3769;Parent=gene3841;Dbxref=Genbank:NP_628004.1,GeneID:1099251;Name=NP_628004.1;Note=SCGD3.16c%2C bkdC1%2C probable dihydrolipoamide acyltransferase component E2%2C len: 469 aa%3B similar to many e.g. SW:ODP2_BACST (EMBL:X53560) Bacillus stearothermophilus dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (427 aa)%2C fasta scores%3B opt: 733 z-score: 672.8 E(): 3.8e-30%2C 38.7%25 identity in 460 aa overlap. Highly similar to SCGD3.30c%2C probable dihydrolipoamide acyltransferase component E2 (491 aa) (40.1%25 identity in 494 aa overlap)%2C in a duplication of this region upstream. Contains Pfam matches to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain) and to entry PF00364 biotin_req_enzy%2C Biotin-requiring enzymes. Contains PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site;gbkey=CDS;gene=bkdC1;product=branched-chain alpha-keto acid dehydrogenase E2;protein_id=NP_628004.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4193538	4194200	.	-	.	ID=id4754;Dbxref=GeneID:1099251;Note=Pfam match to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain)%2C score 252.40%2C E-value 6.1e-72;gbkey=misc_feature;gene=bkdC1
NC_003888.3	RefSeq	repeat_region	4193606	4196371	.	-	.	ID=id4755;Note=repeat 1%3B highly degenerate direct repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4194702	4194875	.	-	.	ID=id4756;Dbxref=GeneID:1099251;Note=Pfam match to entry PF00364 biotin_req_enzy%2C Biotin-requiring enzymes%2C score 21.50%2C E-value 0.00046;gbkey=misc_feature;gene=bkdC1
NC_003888.3	RefSeq	sequence_feature	4194762	4194851	.	-	.	ID=id4757;Dbxref=GeneID:1099251;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site;gbkey=misc_feature;gene=bkdC1
NC_003888.3	RefSeq	gene	4194961	4195941	.	-	.	ID=gene3842;Dbxref=GeneID:1099252;Name=bkdB1;gbkey=Gene;gene=bkdB1;gene_biotype=protein_coding;gene_synonym=bkdB1,SCGD3.17c;locus_tag=SCO3816
NC_003888.3	RefSeq	CDS	4194961	4195941	.	-	0	ID=cds3770;Parent=gene3842;Dbxref=Genbank:NP_628005.1,GeneID:1099252;Name=NP_628005.1;Note=SCGD3.17c%2C bkdB1%2C probable branched-chain alpha keto acid dehydrogenase E1 beta subunit%2C len: 326 aa%3B similar to E1 beta subunits from pyruvate dehydrogenase complexes and branched-chain alpha keto acid dehydrogenases e.g. TR:Q53593 (EMBL:U1716)%2C BkdB%2C Streptomyces avermitilis E1-beta branched-chain alpha keto acid dehydrogenase (334 aa)%2C fasta scores%3B opt: 1188 z-score: 1395.2 E(): 0%2C 53.8%25 identity in 325 aa overlap and SW:ODPB_BACST (EMBL:X53560)%2C PdhB%2C Bacillus stearothermophilus pyruvate dehydrogenase complex E1 beta subunit (324 aa) (48.0%25 identity in 323 aa overlap). Highly similar to SCGD3.31c%2C probable dihydrolipoamide acyltransferase component E2 (334 aa) (55.2%25 identity in 324 aa overlap)%2C in a duplication of this region upstream;gbkey=CDS;gene=bkdB1;product=branched-chain alpha-keto acid dehydrogenase E1 subunit beta;protein_id=NP_628005.1;transl_table=11
NC_003888.3	RefSeq	gene	4195943	4197196	.	-	.	ID=gene3843;Dbxref=GeneID:1099253;Name=bkdA1;gbkey=Gene;gene=bkdA1;gene_biotype=protein_coding;gene_synonym=bkdA1,SCGD3.18c;locus_tag=SCO3817
NC_003888.3	RefSeq	CDS	4195943	4197196	.	-	0	ID=cds3771;Parent=gene3843;Dbxref=Genbank:NP_628006.1,GeneID:1099253;Name=NP_628006.1;Note=SCGD3.18c%2C bkdA1%2C probable branched-chain alpha keto acid dehydrogenase E1 alpha subunit%2C len: 417 aa%3B similar to E1 alpha subunits from pyruvate dehydrogenase complexes and branched-chain alpha keto acid dehydrogenases e.g. TR:Q53610 (EMBL:U26308) Streptomyces avermitilis branched-chain alpha-keto acid dehydrogenase E1-alpha subunit (406 aa)%2C fasta scores%3B opt: 2177 z-score: 2466.3 E(): 0%2C 80.9%25 identity in 409 aa overlap and SW:ODPA_BACST (EMBL:X53560)%2C PdhA%2C Bacillus stearothermophilus pyruvate dehydrogenase complex E1 alpha subunit (368 aa) (39.7%25 identity in 325 aa overlap). Similar to SCGD3.32c%2C probable branched-chain alpha keto acid E1 alpha subunit%2C partial CDS (179 aa) (38.8%25 identity in 165 aa overlap)%2C in a duplication of this region upstream. Contains Pfam match to entry PF00676 E1_dehydrog%2C Dehydrogenase E1 component;gbkey=CDS;gene=bkdA1;product=branched-chain alpha-keto acid dehydrogenase E1 subunit alpha;protein_id=NP_628006.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4196042	4196917	.	-	.	ID=id4758;Dbxref=GeneID:1099253;Note=Pfam match to entry PF00676 E1_dehydrog%2C Dehydrogenase E1 component%2C score 313.20%2C E-value 3.2e-90;gbkey=misc_feature;gene=bkdA1
NC_003888.3	RefSeq	gene	4197520	4198176	.	+	.	ID=gene3844;Dbxref=GeneID:1099254;Name=SCGD3.19;gbkey=Gene;gene=SCGD3.19;gene_biotype=protein_coding;gene_synonym=SCGD3.19;locus_tag=SCO3818
NC_003888.3	RefSeq	CDS	4197520	4198176	.	+	0	ID=cds3772;Parent=gene3844;Dbxref=Genbank:NP_628007.1,GeneID:1099254;Name=NP_628007.1;Note=SCGD3.19%2C probable two-component system transcriptional regulator%2C len: 218 aa%3B similar to many two-component system regulators e.g. TR:O85372 (EMBL:AF064700)%2C CprR%2C Rhodococcus sp. two-component system component controlling expression of an emulsion-stabilizing capsule (212 aa)%2C fasta scores%3B opt: 807 z-score: 938.9 E(): 0%2C 60.7%25 identity in 211 aa overlap%2C but doesn't have a directly adjacent sensor kinase. Similar to many from S.coelicolor e.g. (EMBL:AL049754)%2C SCH10.18c%2C probable two-component system regulator (228 aa) (42.2%25 identity in 211 aa overlap). Contains probable helix-turn-helix motif at aa 172-193 (Score 1200%2C +3.27 SD). Contains Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain and to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=CDS;gene=SCGD3.19;product=two-component system response transcriptional regulator;protein_id=NP_628007.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4197538	4197879	.	+	.	ID=id4759;Dbxref=GeneID:1099254;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 110.80%2C E-value 2.6e-29;gbkey=misc_feature;gene=SCGD3.19
NC_003888.3	RefSeq	sequence_feature	4197976	4198173	.	+	.	ID=id4760;Dbxref=GeneID:1099254;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 59.20%2C E-value 9e-14;gbkey=misc_feature;gene=SCGD3.19
NC_003888.3	RefSeq	sequence_feature	4198027	4198110	.	+	.	ID=id4761;Dbxref=GeneID:1099254;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCGD3.19
NC_003888.3	RefSeq	gene	4198301	4198708	.	+	.	ID=gene3845;Dbxref=GeneID:1099255;Name=SCGD3.20;gbkey=Gene;gene=SCGD3.20;gene_biotype=protein_coding;gene_synonym=SCGD3.20;locus_tag=SCO3819
NC_003888.3	RefSeq	CDS	4198301	4198708	.	+	0	ID=cds3773;Parent=gene3845;Dbxref=Genbank:NP_628008.1,GeneID:1099255;Name=NP_628008.1;Note=SCGD3.20%2C hypothetical protein%2C len: 135 aa%3B unknown function%2C probable CDS suggested by probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCGD3.20;product=hypothetical protein;protein_id=NP_628008.1;transl_table=11
NC_003888.3	RefSeq	gene	4198795	4200363	.	-	.	ID=gene3846;Dbxref=GeneID:1099256;Name=SCGD3.21c;gbkey=Gene;gene=SCGD3.21c;gene_biotype=protein_coding;gene_synonym=SCGD3.21c;locus_tag=SCO3820
NC_003888.3	RefSeq	CDS	4198795	4200363	.	-	0	ID=cds3774;Parent=gene3846;Dbxref=Genbank:NP_628009.1,GeneID:1099256;Name=NP_628009.1;Note=SCGD3.21c%2C probable Ser/Thr protein kinase%2C len: 522 aa%3B similar to many e.g. (EMBL:AF094711)%2C PksC%2C Streptomyces coelicolor Ser/Thr protein kinase (556 aa)%2C fasta scores%3B opt: 907 z-score: 635.3 E(): 4.6e-28%2C 36.6%25 identity in 558 aa overlap%2C which lies upstream%2C on the opposite strand. Similar to mycobacterial Ser/Thr protein kinases%2C but divergent at the C-terminal end e.g. TR:P71584 (EMBL:Z80233)%2C PknB%2C Mycobacterium tuberculosis Ser/Thr protein kinase (626 aa) (42.3%25 identity in 437 aa overlap). Contains a hydrophobic%2C possible membrane-spannig region. C-terminal region contains 5x DPTG repeats followed by 3x GG(E/D)PTG repeats. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C PS00108 Ser/Thr protein kinases active-site signature and PS00107 Protein kinases ATP-binding region signature;gbkey=CDS;gene=SCGD3.21c;product=Ser/Thr protein kinase;protein_id=NP_628009.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4198840	4198911	.	-	.	ID=id4762;Dbxref=GeneID:1099256;Note=repeat 8%3B 3x 18 bp direct repeats;gbkey=repeat_region;gene=SCGD3.21c
NC_003888.3	RefSeq	repeat_region	4198912	4198983	.	-	.	ID=id4763;Dbxref=GeneID:1099256;Note=repeat 9%3B 5x 12 bp direct repeats;gbkey=repeat_region;gene=SCGD3.21c
NC_003888.3	RefSeq	repeat_region	4199502	4200323	.	+	.	ID=id4764;Note=repeat 2%3B degenerate inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4199533	4200309	.	-	.	ID=id4765;Dbxref=GeneID:1099256;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 176.50%2C E-value 4.3e-49;gbkey=misc_feature;gene=SCGD3.21c
NC_003888.3	RefSeq	sequence_feature	4199902	4199940	.	-	.	ID=id4766;Dbxref=GeneID:1099256;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SCGD3.21c
NC_003888.3	RefSeq	sequence_feature	4200220	4200291	.	-	.	ID=id4767;Dbxref=GeneID:1099256;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCGD3.21c
NC_003888.3	RefSeq	gene	4200767	4202437	.	+	.	ID=gene3847;Dbxref=GeneID:1099257;Name=pksC;gbkey=Gene;gene=pksC;gene_biotype=protein_coding;gene_synonym=pksC,SCGD3.22;locus_tag=SCO3821
NC_003888.3	RefSeq	CDS	4200767	4202437	.	+	0	ID=cds3775;Parent=gene3847;Dbxref=Genbank:NP_628010.1,GeneID:1099257;Name=NP_628010.1;Note=SCGD3.22%2C pksC%2C Ser/Thr protein kinase%2C len: 556 aa%3B previously sequenced as (EMBL:AF094711)%2C PksC%2C Streptomyces coelicolor Ser/Thr protein kinase (556 aa). Highly similar to SCGD3.21c which lies upstream%2C on the opposite strand. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C PS00108 Ser/Thr protein kinases active-site signature and PS00107 Protein kinases ATP-binding region signature;gbkey=CDS;gene=pksC;product=Ser/Thr protein kinase;protein_id=NP_628010.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4200767	4202437	.	+	.	ID=id4768;Dbxref=GeneID:1099257;Note=sequence corresponding to EMBL:AF094711%2C Streptomyces coelicolor Ser/Thr protein kinase (pksc) gene%2C complete cds from 1 to 1671;gbkey=misc_feature;gene=pksC
NC_003888.3	RefSeq	repeat_region	4200810	4201616	.	-	.	ID=id4769;Note=repeat 2%3B degenerate 822 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4200824	4201627	.	+	.	ID=id4770;Dbxref=GeneID:1099257;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 187.20%2C E-value 2.5e-52;gbkey=misc_feature;gene=pksC
NC_003888.3	RefSeq	sequence_feature	4200842	4200913	.	+	.	ID=id4771;Dbxref=GeneID:1099257;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=pksC
NC_003888.3	RefSeq	sequence_feature	4201205	4201243	.	+	.	ID=id4772;Dbxref=GeneID:1099257;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pksC
NC_003888.3	RefSeq	repeat_region	4202056	4202074	.	+	.	ID=id4773;Dbxref=GeneID:1099257;Note=repeat 5%3B imperfect 19 bp inverted repeat;gbkey=repeat_region;gene=pksC
NC_003888.3	RefSeq	gene	4202553	4203092	.	-	.	ID=gene3848;Dbxref=GeneID:1099258;Name=SCGD3.23c;gbkey=Gene;gene=SCGD3.23c;gene_biotype=protein_coding;gene_synonym=SCGD3.23c;locus_tag=SCO3822
NC_003888.3	RefSeq	CDS	4202553	4203092	.	-	0	ID=cds3776;Parent=gene3848;Dbxref=Genbank:NP_628011.1,GeneID:1099258;Name=NP_628011.1;Note=SCGD3.23c%2C conserved hypothetical protein%2C len: 179 aa%3B unknown function%2C highly similar to SW:Y0GE_MYCTU (EMBL:Z80343) Mycobacterium tuberculosis hypothetical protein (178 aa)%2C fasta scores%3B opt: 692 z-score: 731.2 E(): 0%2C 65.9%25 identity in 170 aa overlap;gbkey=CDS;gene=SCGD3.23c;product=hypothetical protein;protein_id=NP_628011.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4202997	4203015	.	-	.	ID=id4774;Dbxref=GeneID:1099258;Note=repeat 5%3B imperfect 19 bp inverted repeat;gbkey=repeat_region;gene=SCGD3.23c
NC_003888.3	RefSeq	repeat_region	4203429	4203477	.	+	.	ID=id4775;Note=repeat 6%3B imperfect 48 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4203836	4203884	.	-	.	ID=id4776;Note=repeat 6%3B imperfect 48 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4204101	4205081	.	-	.	ID=gene3849;Dbxref=GeneID:1099259;Name=SCGD3.24c;gbkey=Gene;gene=SCGD3.24c;gene_biotype=protein_coding;gene_synonym=SCGD3.24c;locus_tag=SCO3823
NC_003888.3	RefSeq	CDS	4204101	4205081	.	-	0	ID=cds3777;Parent=gene3849;Dbxref=Genbank:NP_628012.1,GeneID:1099259;Name=NP_628012.1;Note=SCGD3.24c%2C probable quinone oxidoreductase%2C len: 326 aa%3B similar to eukaryotic quinone oxidoreductases (some ) e.g. SW:QOR_CAVPO (EMBL:M26936) Cavia porcellus zeta-crystallin/quinone reductase (329 aa)%2C fasta scores%3B opt: 565 z-score: 588.2 E(): 2e-25%2C 32.6%25 identity in 328 aa overlap. Highly similar to TR:O65423 (EMBL:AL022603) Arabidopsis thaliana NADPH quinone oxidoreductase (325 aa) (57.2%25 identity in 325 aa overlap). Similar to SCE68.12c%2C S.coelicolor possible dehydrogenase (318 aa) (31.1%25 identity in 325 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SCGD3.24c;product=quinone oxidoreductase;protein_id=NP_628012.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4204110	4205063	.	-	.	ID=id4777;Dbxref=GeneID:1099259;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 41.10%2C E-value 2e-11;gbkey=misc_feature;gene=SCGD3.24c
NC_003888.3	RefSeq	gene	4205224	4206252	.	+	.	ID=gene3850;Dbxref=GeneID:1099260;Name=SCGD3.25;gbkey=Gene;gene=SCGD3.25;gene_biotype=protein_coding;gene_synonym=SCGD3.25;locus_tag=SCO3824
NC_003888.3	RefSeq	CDS	4205224	4206252	.	+	0	ID=cds3778;Parent=gene3850;Dbxref=Genbank:NP_628013.1,GeneID:1099260;Name=NP_628013.1;Note=SCGD3.25%2C probable ABC-transporter ATP-binding component%2C len: 342 aa%3B may be involved in antibiotic resistance by acting as an efflux pump%2C highly similar to to many ABC-tranporter ATP-binding components (especially those involved in antibiotic transport) e.g. TR:O86916 (EMBL:Y15759) Streptomyces rochei ABC-tranporter which induces multidrug resistance (363 aa)%2C fasta scores%3B opt: 1635 z-score: 1717.7 E(): 0%2C 77.6%25 identity in 340 aa overlap. Similar to many from S.coelicolor e.g. (EMBL:AL049841)%2C SCE9.25c%2C S.coelicolor probable ABC transporter ATP-binding component (315 aa) (53.2%25 identity in 310 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 192.70%2C PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCGD3.25;product=ABC transporter ATP-binding protein;protein_id=NP_628013.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4205326	4205871	.	+	.	ID=id4778;Dbxref=GeneID:1099260;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 192.70%2C E-value 5.7e-54;gbkey=misc_feature;gene=SCGD3.25
NC_003888.3	RefSeq	sequence_feature	4205347	4205370	.	+	.	ID=id4779;Dbxref=GeneID:1099260;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCGD3.25
NC_003888.3	RefSeq	sequence_feature	4205644	4205688	.	+	.	ID=id4780;Dbxref=GeneID:1099260;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCGD3.25
NC_003888.3	RefSeq	gene	4206249	4207097	.	+	.	ID=gene3851;Dbxref=GeneID:1099261;Name=SCGD3.26;gbkey=Gene;gene=SCGD3.26;gene_biotype=protein_coding;gene_synonym=SCGD3.26;locus_tag=SCO3825
NC_003888.3	RefSeq	CDS	4206249	4207097	.	+	0	ID=cds3779;Parent=gene3851;Dbxref=Genbank:NP_628014.1,GeneID:1099261;Name=NP_628014.1;Note=SCGD3.26%2C probable ABC-transporter transmembrane component%2C len: 282 aa%3B may be involved in antibiotic resistance by acting as an efflux pump%2C highly similar to to many ABC-tranporter transmembrane components (especially those involved in antibiotic transport) e.g. TR:O86917 (EMBL:Y15759) Streptomyces rochei ABC-tranporter which induces multidrug resistance (284 aa)%2C fasta scores%3B opt: 1491 z-score: 1785.3 E(): 0%2C 77.5%25 identity in 284 aa overlap. Similar to many from S.coelicolor e.g. (EMBL:AL049841)%2C SCE9.24c%2C S.coelicolor probable ABC transporter transmembrane component (260 aa) (35.0%25 identity in 254 aa overlap). Contains hydrophobic%2C probable membrane-spanning regions. Contains PS00890 ABC-2 type transport system integral membrane proteins signature;gbkey=CDS;gene=SCGD3.26;product=ABC-transporter transmembrane protein;protein_id=NP_628014.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4206870	4206983	.	+	.	ID=id4781;Dbxref=GeneID:1099261;Note=PS00890 ABC-2 type transport system integral membrane proteins signature;gbkey=misc_feature;gene=SCGD3.26
NC_003888.3	RefSeq	gene	4207170	4208267	.	-	.	ID=gene3852;Dbxref=GeneID:1099262;Name=SCGD3.27c;gbkey=Gene;gene=SCGD3.27c;gene_biotype=protein_coding;gene_synonym=SCGD3.27c;locus_tag=SCO3826
NC_003888.3	RefSeq	CDS	4207170	4208267	.	-	0	ID=cds3780;Parent=gene3852;Dbxref=Genbank:NP_628015.1,GeneID:1099262;Name=NP_628015.1;Note=SCGD3.27c%2C possible membrane protein%2C len: 365 aa%3B unknown function%2C weakly similar to C-terminal half of SW:KEFC_ECOLI (EMBL:X56742)%2C KefC%2C Escherichia coli glutathione-regulated potassium-efflux system protein (620 aa)%2C fasta scores%3B opt: 164 z-score: 190.7 E(): 0.0027%2C 21.4%25 identity in 308 aa overlap. Highest similarity to TR:O53346 (EMBL:AL021646) Mycobacterium tuberculosis hypothetical protein (355 aa) (49.8%25 identity in 325 aa overlap). Also weakly similar to C-terminal half of SC66T3.20%2C S.coelicolor possible membrane protein (623 aa) (24.6%25 identity in 329 aa overlap) and shares regions of local similarity with other  S.coelicolor membrane proteins. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCGD3.27c;product=ion channel membrane protein;protein_id=NP_628015.1;transl_table=11
NC_003888.3	RefSeq	gene	4208264	4209661	.	-	.	ID=gene3853;Dbxref=GeneID:1099263;Name=SCGD3.28c;gbkey=Gene;gene=SCGD3.28c;gene_biotype=protein_coding;gene_synonym=SCGD3.28c;locus_tag=SCO3827
NC_003888.3	RefSeq	CDS	4208264	4209661	.	-	0	ID=cds3781;Parent=gene3853;Dbxref=Genbank:NP_628016.1,GeneID:1099263;Name=NP_628016.1;Note=SCGD3.28c%2C probable molybdenum cofactor biosynthesis protein%2C len: 465 aa%3B similar to many e.g. SW:MOEA_ECOLI (EMBL:M21151)%2C moeA%2C Escherichia coli molybdenum cofactor biosynthesis protein (411 aa)%2C fasta scores%3B opt: 481 z-score: 484.8 E(): 1.1e-19%2C 32.9%25 identity in 331 aa overlap. This sequence is some 50 aa longer than many other predicted moeA homologues. The position of the start codon is suggested by the GC frameplot in this region. Contains Pfam match to entry PF00994 MoCF_biosynth%2C Molybdenum cofactor biosynthesis protein;gbkey=CDS;gene=SCGD3.28c;product=molybdenum cofactor biosynthesis protein;protein_id=NP_628016.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4208303	4209448	.	-	.	ID=id4782;Dbxref=GeneID:1099263;Note=Pfam match to entry PF00994 MoCF_biosynth%2C Molybdenum cofactor biosynthesis protein%2C score 180.70%2C E-value 2.4e-50;gbkey=misc_feature;gene=SCGD3.28c
NC_003888.3	RefSeq	gene	4209661	4210572	.	-	.	ID=gene3854;Dbxref=GeneID:1099264;Name=SCGD3.29c;gbkey=Gene;gene=SCGD3.29c;gene_biotype=protein_coding;gene_synonym=SCGD3.29c;locus_tag=SCO3828
NC_003888.3	RefSeq	CDS	4209661	4210572	.	-	0	ID=cds3782;Parent=gene3854;Dbxref=Genbank:NP_628017.1,GeneID:1099264;Name=NP_628017.1;Note=SCGD3.29c%2C possible molybdopterin-guanine dinucleotide biosynthesis protein%2C len: 303 aa%3B the N-terminal 150 aa is similar to several molybdenum cofactor biosynthesis proteins e.g. SW:MOBA_ECOLI (EMBL:L19201)%2C mobA%2C Escherichia coli molybdopterin-guanine dinucleotide biosynthesis protein A (194 aa)%2C fasta scores%3B opt: 175 z-score: 202.5 E(): 0.0006%2C 32.7%25 identity in 150 aa overlap;gbkey=CDS;gene=SCGD3.29c;product=molybdopterin-guanine dinucleotide biosynthesis protein;protein_id=NP_628017.1;transl_table=11
NC_003888.3	RefSeq	gene	4210796	4212271	.	-	.	ID=gene3855;Dbxref=GeneID:1099265;Name=bkdC2;gbkey=Gene;gene=bkdC2;gene_biotype=protein_coding;gene_synonym=bkdC2,SCGD3.30c;locus_tag=SCO3829
NC_003888.3	RefSeq	CDS	4210796	4212271	.	-	0	ID=cds3783;Parent=gene3855;Dbxref=Genbank:NP_628018.1,GeneID:1099265;Name=NP_628018.1;Note=SCGD3.30c%2C bkdC2%2C probable dihydrolipoamide acyltransferase component E2%2C len: 491 aa%3B similar to many e.g. SW:ODP2_BACST (EMBL:X53560) Bacillus stearothermophilus dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (427 aa)%2C fasta scores%3B opt: 672 z-score: 634.2 E(): 5.4e-28%2C 33.2%25 identity in 482 aa overlap. Highly similar to SCGD3.16c%2C probable dihydrolipoamide acyltransferase component E2 (469 aa) (40.0%25 identity in 492 aa overlap)%2C in a duplication of this region downstream. Contains Pfam matches to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain) and to entry PF00364 biotin_req_enzy%2C Biotin-requiring enzymes;gbkey=CDS;gene=bkdC2;product=branched-chain alpha-keto acid dehydrogenase E2;protein_id=NP_628018.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4210802	4211455	.	-	.	ID=id4783;Dbxref=GeneID:1099265;Note=Pfam match to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain)%2C score 240.90%2C E-value 1.8e-68;gbkey=misc_feature;gene=bkdC2
NC_003888.3	RefSeq	repeat_region	4210870	4213730	.	-	.	ID=id4784;Note=repeat 1%3B highly degenerate direct repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4212023	4212196	.	-	.	ID=id4785;Dbxref=GeneID:1099265;Note=Pfam match to entry PF00364 biotin_req_enzy%2C Biotin-requiring enzymes%2C score 4.00%2C E-value 0.023;gbkey=misc_feature;gene=bkdC2
NC_003888.3	RefSeq	repeat_region	4212145	4212173	.	+	.	ID=id4786;Note=repeat 7%3B imperfect 29 bp inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4212271	4213275	.	-	.	ID=gene3856;Dbxref=GeneID:1099266;Name=bkdB2;gbkey=Gene;gene=bkdB2;gene_biotype=protein_coding;gene_synonym=bkdB2,SCGD3.31c;locus_tag=SCO3830
NC_003888.3	RefSeq	CDS	4212271	4213275	.	-	0	ID=cds3784;Parent=gene3856;Dbxref=Genbank:NP_628019.1,GeneID:1099266;Name=NP_628019.1;Note=SCGD3.31c%2C bkdB2%2C probable branched-chain alpha keto acid dehydrogenase E1 beta subunit%2C len: 334 aa%3B similar to E1 beta subunits from pyruvate dehydrogenase complexes and branched-chain alpha keto acid dehydrogenases e.g. TR:Q53593 (EMBL:U1716)%2C BkdB%2C Streptomyces avermitilis E1-beta branched-chain alpha keto acid dehydrogenase (334 aa)%2C fasta scores%3B opt: 2063 z-score: 2427.3 E(): 0%2C 91.0%25 identity in 334 aa overlap and SW:ODPB_BACST (EMBL:X53560)%2C PdhB%2C Bacillus stearothermophilus pyruvate dehydrogenase complex E1 beta subunit (324 aa) (45.5%25 identity in 319 aa overlap). Highly similar to SCGD3.17c%2C probable branched-chain alpha keto acid dehydrogenase E1 beta subunit (326 aa) (55.2%25 identity in 324 aa overlap)%2C in a duplication of this region downstream;gbkey=CDS;gene=bkdB2;product=branched-chain alpha-keto acid dehydrogenase E1 subunit beta;protein_id=NP_628019.1;transl_table=11
NC_003888.3	RefSeq	gene	4213272	4214438	.	-	.	ID=gene3857;Dbxref=GeneID:1099267;Name=bkdA2;gbkey=Gene;gene=bkdA2;gene_biotype=protein_coding;gene_synonym=bkdA2,SCGD3.32c,SCH69.01c;locus_tag=SCO3831
NC_003888.3	RefSeq	CDS	4213272	4214438	.	-	0	ID=cds3785;Parent=gene3857;Dbxref=Genbank:NP_733618.1,GeneID:1099267;Name=NP_733618.1;Note=SCGD3.32c%2C bkdA2%2C probable branched-chain alpha keto acid dehydrogenase E1 alpha subunit%2C partial CDS%2C len: >179 aa%3B similar to E1 alpha subunits from pyruvate dehydrogenase complexes and branched-chain alpha keto acid dehydrogenases e.g. TR:Q53592 (EMBL:U17169)%2C BkdA%2C Streptomyces avermitilis branched-chain alpha-keto acid dehydrogenase E1-alpha subunit (381 aa)%2C fasta scores%3B opt: 987 z-score: 1131.6 E(): 0%2C 90.3%25 identity in 165 aa overlap and SW:ODPA_ACHLA (EMBL:M81753)%2C PdhA%2C Acholeplasma laidlawii pyruvate dehydrogenase E1 component%2C alpha subunit (345 aa) (34.6%25 identity in 162 aa overlap). Similar to SCGD3.18c%2C probable branched-chain alpha keto acid E1 alpha subunit (417 aa) (38.8%25 identity in 165 aa overlap)%2C in a duplication of this region downstream. Contains probable coiled-coil from 148 to 176 (29 residues) (Max score: 1.437%2C probability 0.84)~SCH69.01c%2C bkdA2%2C E1-alpha branched-chain alpha keto acid dehydrogenase%2C len: >261aa%3B very similar to the first 261 aa of TR:Q53592 (EMBL:U17169) BkdA%2C E1-alpha branched-chain alpha keto acid dehydrogenase from Streptomyces avermitilis (381 aa) fasta scores%3B opt: 1602%2C z-score: 1786.0%2C E(): 0%2C (90.8%25 identity in 261 aa overlap). Contains Pfam match to entry PF00676 E1_dehydrog%2C Dehydrogenase E1 component.;gbkey=CDS;gene=bkdA2;product=E1-alpha branched-chain alpha keto acid dehydrogenase;protein_id=NP_733618.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4213656	4214276	.	-	.	ID=id4787;Dbxref=GeneID:1099267;Note=Pfam match to entry PF00676 E1_dehydrog%2C Dehydrogenase E1 component%2C score 109.40%2C E-value 7.1e-29.;gbkey=misc_feature;gene=bkdA2
NC_003888.3	RefSeq	repeat_region	4213709	4213737	.	-	.	ID=id4788;Dbxref=GeneID:1099267;Note=repeat 7%3B imperfect 29 bp inverted repeat;gbkey=repeat_region;gene=bkdA2
NC_003888.3	RefSeq	gene	4214734	4215141	.	+	.	ID=gene3858;Dbxref=GeneID:1099268;Name=SCH69.02;gbkey=Gene;gene=SCH69.02;gene_biotype=protein_coding;gene_synonym=SCH69.02;locus_tag=SCO3832
NC_003888.3	RefSeq	CDS	4214734	4215141	.	+	0	ID=cds3786;Parent=gene3858;Dbxref=Genbank:NP_628020.1,GeneID:1099268;Name=NP_628020.1;Note=SCH69.02%2C possible transcriptional regulator%2C len: 135 aa%3B similar to many e.g. SW:LRP_ECOLI leucine-responsive regulatory protein from Escherichia coli (163 aa) fasta scores%3B opt: 181%2C z-score: 249.4%2C E(): 1.5e-06%2C (29.5%25 identity in 129 aa overlap). Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family and a probable helix-turn-helix 9-30 aa (+3.69 SD);gbkey=CDS;gene=SCH69.02;product=transcriptional regulator;protein_id=NP_628020.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4214776	4215069	.	+	.	ID=id4789;Dbxref=GeneID:1099268;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 42.40%2C E-value 1e-08.;gbkey=misc_feature;gene=SCH69.02
NC_003888.3	RefSeq	gene	4215177	4215806	.	-	.	ID=gene3859;Dbxref=GeneID:1099269;Name=SCH69.03c;gbkey=Gene;gene=SCH69.03c;gene_biotype=protein_coding;gene_synonym=SCH69.03c;locus_tag=SCO3833
NC_003888.3	RefSeq	CDS	4215177	4215806	.	-	0	ID=cds3787;Parent=gene3859;Dbxref=Genbank:NP_628021.1,GeneID:1099269;Name=NP_628021.1;Note=SCH69.03c%2C possible transcriptional regulator%2C len: 209 aa%3B similar to many e.g. TR:AAD13556 (EMBL:AF080235) LanK regulator from the landomycin biosynthesis cluster of Streptomyces cyanogenus (192 aa) fasta scores%3B opt: 201%2C z-score: 245.8%2C E(): 2.3e-06%2C (33.3%25 identity in 159 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and probable helix-turn-helix 31-52 (+5.06 SD).;gbkey=CDS;gene=SCH69.03c;product=transcriptional regulator;protein_id=NP_628021.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4215627	4215767	.	-	.	ID=id4790;Dbxref=GeneID:1099269;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 44.00%2C E-value 1.9e-10.;gbkey=misc_feature;gene=SCH69.03c
NC_003888.3	RefSeq	gene	4215803	4217317	.	-	.	ID=gene3860;Dbxref=GeneID:1099270;Name=SCH69.04c;gbkey=Gene;gene=SCH69.04c;gene_biotype=protein_coding;gene_synonym=SCH69.04c;locus_tag=SCO3834
NC_003888.3	RefSeq	CDS	4215803	4217317	.	-	0	ID=cds3788;Parent=gene3860;Dbxref=Genbank:NP_628022.1,GeneID:1099270;Name=NP_628022.1;Note=converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation;gbkey=CDS;gene=SCH69.04c;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=NP_628022.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4216457	4217290	.	-	.	ID=id4791;Dbxref=GeneID:1099270;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C score 326.80%2C E-value 2.4e-94.;gbkey=misc_feature;gene=SCH69.04c
NC_003888.3	RefSeq	gene	4217476	4219167	.	+	.	ID=gene3861;Dbxref=GeneID:1099271;Name=SCH69.05;gbkey=Gene;gene=SCH69.05;gene_biotype=protein_coding;gene_synonym=SCH69.05;locus_tag=SCO3835
NC_003888.3	RefSeq	CDS	4217476	4219167	.	+	0	ID=cds3789;Parent=gene3861;Dbxref=Genbank:NP_628023.1,GeneID:1099271;Name=NP_628023.1;Note=SCH69.05%2C possible dehydrogenase%2C len: 563aa%3B similar to many eg. SW:PUTA_ECOLI proline dehydrogenase (1320 aa) fasta scores%3B opt: 256%2C z-score: 285.1%2C E(): 1.5e-08%2C (27.1%25 identity in 376 aa overlap).;gbkey=CDS;gene=SCH69.05;product=dehydrogenase;protein_id=NP_628023.1;transl_table=11
NC_003888.3	RefSeq	gene	4219178	4219963	.	-	.	ID=gene3862;Dbxref=GeneID:1099272;Name=SCH69.06c;gbkey=Gene;gene=SCH69.06c;gene_biotype=protein_coding;gene_synonym=SCH69.06c;locus_tag=SCO3836
NC_003888.3	RefSeq	CDS	4219178	4219963	.	-	0	ID=cds3790;Parent=gene3862;Dbxref=Genbank:NP_628024.1,GeneID:1099272;Name=NP_628024.1;Note=SCH69.06c%2C possible rRNA methylase%2C len: 261aa%3B similar to many eg. TR:O84408 (EMBL:AE001313) rRNA methylase (269 aa) fasta scores%3B opt: 197 z-score: 225.0 E(): 3.3e-05 (26.8%25 identity in 235 aa overlap). Contains Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family.;gbkey=CDS;gene=SCH69.06c;product=rRNA methylase;protein_id=NP_628024.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4219217	4219615	.	-	.	ID=id4792;Dbxref=GeneID:1099272;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 51.70%2C E-value 1.6e-11.;gbkey=misc_feature;gene=SCH69.06c
NC_003888.3	RefSeq	gene	4219960	4221270	.	-	.	ID=gene3863;Dbxref=GeneID:1099273;Name=SCH69.07c;gbkey=Gene;gene=SCH69.07c;gene_biotype=protein_coding;gene_synonym=SCH69.07c;locus_tag=SCO3837
NC_003888.3	RefSeq	CDS	4219960	4221270	.	-	0	ID=cds3791;Parent=gene3863;Dbxref=Genbank:NP_628025.1,GeneID:1099273;Name=NP_628025.1;Note=SCH69.07c%2C membrane protein%2C len: 436 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH69.07c;product=hypothetical protein;protein_id=NP_628025.1;transl_table=11
NC_003888.3	RefSeq	gene	4221267	4222505	.	-	.	ID=gene3864;Dbxref=GeneID:1099274;Name=SCH69.08c;gbkey=Gene;gene=SCH69.08c;gene_biotype=protein_coding;gene_synonym=SCH69.08c;locus_tag=SCO3838
NC_003888.3	RefSeq	CDS	4221267	4222505	.	-	0	ID=cds3792;Parent=gene3864;Dbxref=Genbank:NP_628026.1,GeneID:1099274;Name=NP_628026.1;Note=SCH69.08c%2C membrane protein%2C len: 412 aa%3B contains 7 x QG repeat 65-78aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCH69.08c;product=hypothetical protein;protein_id=NP_628026.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4222272	4222313	.	-	.	ID=id4793;Dbxref=GeneID:1099274;Note=7 x QG repeat within SCH69.08c.;gbkey=repeat_region;gene=SCH69.08c
NC_003888.3	RefSeq	gene	4222523	4222852	.	-	.	ID=gene3865;Dbxref=GeneID:1099275;Name=SCH69.09c;gbkey=Gene;gene=SCH69.09c;gene_biotype=protein_coding;gene_synonym=SCH69.09c;locus_tag=SCO3839
NC_003888.3	RefSeq	CDS	4222523	4222852	.	-	0	ID=cds3793;Parent=gene3865;Dbxref=Genbank:NP_628027.1,GeneID:1099275;Name=NP_628027.1;Note=SCH69.09c%2C unknown%2C len: 109aa%3B similar to SW:GLPE_ECOLI protein of unknown function from the sn-glycerol 3-phosphate regulon of Escherichia coli (108 aa) fasta scores%3B opt: 154%2C z-score: 209.1%2C E(): 0.00026%2C (33.3%25 identity in 78 aa overlap).;gbkey=CDS;gene=SCH69.09c;product=hypothetical protein;protein_id=NP_628027.1;transl_table=11
NC_003888.3	RefSeq	gene	4222903	4223718	.	-	.	ID=gene3866;Dbxref=GeneID:1099276;Name=SCH69.10c;gbkey=Gene;gene=SCH69.10c;gene_biotype=protein_coding;gene_synonym=SCH69.10c;locus_tag=SCO3840
NC_003888.3	RefSeq	CDS	4222903	4223718	.	-	0	ID=cds3794;Parent=gene3866;Dbxref=Genbank:NP_628028.1,GeneID:1099276;Name=NP_628028.1;Note=SCH69.10c%2C unknown%2C len: 271aa%3B similar to TR:P74322 (EMBL:D90914) from Synechocystis sp. PCC6803 (228 aa) fasta scores%3B opt: 238%2C z-score: 277.0%2C E(): 4.2e-08%2C (26.6%25 identity in 259 aa overlap). Contains possible coiled-coil at 30-40aa.;gbkey=CDS;gene=SCH69.10c;product=hypothetical protein;protein_id=NP_628028.1;transl_table=11
NC_003888.3	RefSeq	gene	4223858	4225387	.	-	.	ID=gene3867;Dbxref=GeneID:1099277;Name=SCH69.11c;gbkey=Gene;gene=SCH69.11c;gene_biotype=protein_coding;gene_synonym=SCH69.11c;locus_tag=SCO3841
NC_003888.3	RefSeq	CDS	4223858	4225387	.	-	0	ID=cds3795;Parent=gene3867;Dbxref=Genbank:NP_628029.1,GeneID:1099277;Name=NP_628029.1;Note=SCH69.11c%2C unknown%2C len: 509aa%3B similar to TR:O86499 (EMBL:AL031232) hypothetical protein from Streptomyces coelicolor (469 aa) fasta scores%3B opt: 648%2C z-score: 691.5%2C E(): 3.5e-31%2C (41.6%25 identity in 471 aa overlap);gbkey=CDS;gene=SCH69.11c;product=hypothetical protein;protein_id=NP_628029.1;transl_table=11
NC_003888.3	RefSeq	gene	4225790	4226674	.	+	.	ID=gene3868;Dbxref=GeneID:1099278;Name=SCH69.12;gbkey=Gene;gene=SCH69.12;gene_biotype=protein_coding;gene_synonym=SCH69.12;locus_tag=SCO3842
NC_003888.3	RefSeq	CDS	4225790	4226674	.	+	0	ID=cds3796;Parent=gene3868;Dbxref=Genbank:NP_628030.1,GeneID:1099278;Name=NP_628030.1;Note=SCH69.12%2C possible dioxygenase%2C len: 294aa%3B similar to many catechol dioxygenases eg. TR:O31247 (EMBL:AJ000187) catechol 1.2-dioxygenase from Arthrobacter sp. mA3 (282 aa) fasta scores%3B opt: 181%2C z-score: 193.2%2C E(): 0.002%2C (32.8%25 identity in 177 aa overlap). Contains Pfam match to entry PF00775 Dioxygenase%2C Dioxygenase. Also contains possible membrane spanning hydrophobic region;gbkey=CDS;gene=SCH69.12;product=dioxygenase;protein_id=NP_628030.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4225847	4226473	.	+	.	ID=id4794;Dbxref=GeneID:1099278;Note=Pfam match to entry PF00775 Dioxygenase%2C Dioxygenase%2C score -36.40%2C E-value 7.7e-09.;gbkey=misc_feature;gene=SCH69.12
NC_003888.3	RefSeq	stem_loop	4226722	4226758	.	-	.	ID=id4795;Note=37 base perfect inverted repeat with 3 base loop.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4226761	4226847	.	-	.	ID=gene3869;Dbxref=GeneID:3240034;Name=SCOt31;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt31
NC_003888.3	RefSeq	tRNA	4226761	4226847	.	-	.	ID=rna44;Parent=gene3869;Dbxref=GeneID:3240034;Note=tRNA Leu anticodon CAG%2C Cove score 67.20;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	exon	4226761	4226847	.	-	.	ID=id4796;Parent=rna44;Dbxref=GeneID:3240034;Note=tRNA Leu anticodon CAG%2C Cove score 67.20;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	gene	4227374	4228246	.	+	.	ID=gene3870;Dbxref=GeneID:1099279;Name=SCH69.13;gbkey=Gene;gene=SCH69.13;gene_biotype=protein_coding;gene_synonym=SCH69.13;locus_tag=SCO3843
NC_003888.3	RefSeq	CDS	4227374	4228246	.	+	0	ID=cds3797;Parent=gene3870;Dbxref=Genbank:NP_628031.1,GeneID:1099279;Name=NP_628031.1;Note=SCH69.13%2C unknown%2C len: 290 aa%3B similar to the N-terminal region of TR:P71590 (EMBL:Z80233) hypothetical protein from Mycobacterium tuberculosis (527 aa) fasta scores%3B opt: 268%2C z-score: 221.4%2C E(): 5.3e-05%2C (28.1%25 identity in 217 aa overlap).;gbkey=CDS;gene=SCH69.13;product=hypothetical protein;protein_id=NP_628031.1;transl_table=11
NC_003888.3	RefSeq	gene	4228257	4228775	.	+	.	ID=gene3871;Dbxref=GeneID:1099280;Name=SCH69.14;gbkey=Gene;gene=SCH69.14;gene_biotype=protein_coding;gene_synonym=SCH69.14;locus_tag=SCO3844
NC_003888.3	RefSeq	CDS	4228257	4228775	.	+	0	ID=cds3798;Parent=gene3871;Dbxref=Genbank:NP_628032.1,GeneID:1099280;Name=NP_628032.1;Note=SCH69.14%2C hypothetical protein%2C len: 172 aa%3B similar to TR:P71589 (EMBL:Z80233) hypothetical protein from Mycobacterium tuberculosis (155 aa) fasta scores%3B opt: 389%2C z-score: 442.8%2C E(): 2.5e-17%2C (46.2%25 identity in 171 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH69.14;product=hypothetical protein;protein_id=NP_628032.1;transl_table=11
NC_003888.3	RefSeq	gene	4228917	4230464	.	+	.	ID=gene3872;Dbxref=GeneID:1099281;Name=SCH69.15;gbkey=Gene;gene=SCH69.15;gene_biotype=protein_coding;gene_synonym=SCH69.15;locus_tag=SCO3845
NC_003888.3	RefSeq	CDS	4228917	4230464	.	+	0	ID=cds3799;Parent=gene3872;Dbxref=Genbank:NP_628033.1,GeneID:1099281;Name=NP_628033.1;Note=SCH69.15%2C possible protein phosphatase%2C len: 515aa%3B similar to many of undefined function egs. TR:P71588 (EMBL:Z80233) hypothetical protein from Mycobacterium tuberculosis (514 aa) fasta scores%3B opt: 989%2C z-score: 916.0%2C E(): 0%2C (42.9%25 identity in 536 aa overlap) and TR:Q50188 (EMBL:Z70722) phophoprotein phosphatase from Mycobacterium leprae (509 aa) fasta scores%3B opt: 966%2C z-score: 895.0%2C E(): 0%2C (40.0%25 identity in 530 aa overlap). Contains 2 Pfam matches to entry PF00481 PP2C%2C Protein phosphatase 2C. could have a role in signalling.;gbkey=CDS;gene=SCH69.15;product=protein phosphatase;protein_id=NP_628033.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4228929	4229318	.	+	.	ID=id4797;Dbxref=GeneID:1099281;Note=Pfam match to entry PF00481 PP2C%2C Protein phosphatase 2C%2C score 32.60%2C E-value 2.8e-08.;gbkey=misc_feature;gene=SCH69.15
NC_003888.3	RefSeq	sequence_feature	4229424	4229606	.	+	.	ID=id4798;Dbxref=GeneID:1099281;Note=Pfam match to entry PF00481 PP2C%2C Protein phosphatase 2C%2C score 9.50%2C E-value 0.11.;gbkey=misc_feature;gene=SCH69.15
NC_003888.3	RefSeq	gene	4230492	4231931	.	+	.	ID=gene3873;Dbxref=GeneID:1099282;Name=SCH69.16;gbkey=Gene;gene=SCH69.16;gene_biotype=protein_coding;gene_synonym=SCH69.16;locus_tag=SCO3846
NC_003888.3	RefSeq	CDS	4230492	4231931	.	+	0	ID=cds3800;Parent=gene3873;Dbxref=Genbank:NP_628034.1,GeneID:1099282;Name=NP_628034.1;Note=SCH69.16%2C probable FtsW/RodA/SpoVE family cell cycle protein%2C len: 479aa%3B similar to many egs. SW:FTSW_MYCTU probable cell division protein FtsW from Mycobacterium tuberculosis (469 aa) fasta scores%3B opt: 1367%2C z-score: 1568.6%2C E(): 0%2C (48.8%25 identity in 451 aa overlap) and SW:SP5E_BACSU stage V sporulation protein E from Bacillus subtilis (366 aa) fasta scores%3B opt: 496%2C z-score: 572.9%2C E(): 1.4e-24%2C (31.7%25 identity in 391 aa overlap). Also similar to SC6G9.31 from Streptomyces coelicolor (446 aa) fasta scores%3B opt: 1132%2C z-score: 1182.0%2C E(): 0%2C (58.6%25 identity in 444 aa overlap). Contains Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein. Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCH69.16;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=NP_628034.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4230738	4231871	.	+	.	ID=id4799;Dbxref=GeneID:1099282;Note=Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein%2C score 253.10%2C E-value 3.7e-72.;gbkey=misc_feature;gene=SCH69.16
NC_003888.3	RefSeq	gene	4231928	4233400	.	+	.	ID=gene3874;Dbxref=GeneID:1099283;Name=SCH69.17;gbkey=Gene;gene=SCH69.17;gene_biotype=protein_coding;gene_synonym=SCH69.17;locus_tag=SCO3847
NC_003888.3	RefSeq	CDS	4231928	4233400	.	+	0	ID=cds3801;Parent=gene3874;Dbxref=Genbank:NP_628035.1,GeneID:1099283;Name=NP_628035.1;Note=SCH69.17%2C probable  penicillin-binding protein%2C len: 490 aa%3B similar to many e.g. TR:P71586 (EMBL:Z80233)  penicillin-binding protein from Mycobacterium tuberculosis (491 aa) fasta scores%3B opt: 112%2C1 z-score: 1262.1%2C E(): 0%2C (39.3%25 identity in 499 aa overlap) and SW:PBPC_BACSU penicillin-binding protein 3 from Bacillus subtilis (668 aa) fasta scores%3B opt: 447%2C z-score: 502.5%2C E(): 1.2e-20%2C (29.0%25 identity in 386 aa overlap). Also similar to SC6G9.32 from Streptomyces coelicolor (485 aa) fasta scores%3B opt: 1493%2C z-score: 1531.4%2C E(): 0%2C (49.4%25 identity in 488 aa overlap). Contains Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain. Also contains possible N-terminal signal sequence.;gbkey=CDS;gene=SCH69.17;product=penicillin-binding protein;protein_id=NP_628035.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4232345	4233367	.	+	.	ID=id4800;Dbxref=GeneID:1099283;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 271.00%2C E-value 1.5e-77.;gbkey=misc_feature;gene=SCH69.17
NC_003888.3	RefSeq	gene	4233591	4235612	.	+	.	ID=gene3875;Dbxref=GeneID:1099284;Name=SCH69.18;gbkey=Gene;gene=SCH69.18;gene_biotype=protein_coding;gene_synonym=SCH69.18;locus_tag=SCO3848
NC_003888.3	RefSeq	CDS	4233591	4235612	.	+	0	ID=cds3802;Parent=gene3875;Dbxref=Genbank:NP_628036.1,GeneID:1099284;Name=NP_628036.1;Note=SCH69.18%2C possible Ser/Thr protein kinase%2C len: 673 aa%3B similar to many e.g. TR:P71584 (EMBL:Z80233)  Ser/Thr protein kinase from Mycobacterium tuberculosis (626 aa) fasta scores%3B opt: 1185%2C z-score: 1028.0%2C E(): 0%2C (42.0%25 identity in 646 aa overlap) and TR:P95308 (EMBL:X99618) Ser/Thr protein kinase from Mycobacterium tuberculosis (662 aa) fasta scores%3B opt: 598%2C z-score: 522.8%2C E(): 8.6e-22%2C (33.9%25 identity in 345 aa overlap). Also similar to SCGD3.21c from Streptomyces coelicolor (522 aa) fasta scores%3B opt: 1104%2C z-score: 1039.5%2C E(): 0%2C (50.0%25 identity in 392 aa overlap). Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain. Also contains possible membrane spanning hydrophobic region.;gbkey=CDS;gene=SCH69.18;product=Ser/Thr protein kinase;protein_id=NP_628036.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4233621	4234397	.	+	.	ID=id4801;Dbxref=GeneID:1099284;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 197.60%2C E-value 1.9e-55.;gbkey=misc_feature;gene=SCH69.18
NC_003888.3	RefSeq	stem_loop	4235631	4235673	.	-	.	ID=id4802;Note=Perfect inverted repeat%2C 20/20 (100%25) matches%2C 0 gaps.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4235691	4236452	.	-	.	ID=gene3876;Dbxref=GeneID:1099285;Name=SCH69.19c;gbkey=Gene;gene=SCH69.19c;gene_biotype=protein_coding;gene_synonym=SCH69.19c;locus_tag=SCO3849
NC_003888.3	RefSeq	CDS	4235691	4236452	.	-	0	ID=cds3803;Parent=gene3876;Dbxref=Genbank:NP_628037.1,GeneID:1099285;Name=NP_628037.1;Note=SCH69.19c%2C possible integral membrane protein%2C len: 253 aa%3B contains possible membrane spanning hydrophobic region. Similar to neighbouring gene SCH69.20c fasta scores%3B opt: 651%2C z-score: 689.2%2C E(): 2.8e-33%2C (45.9%25 identity in 218 aa overlap);gbkey=CDS;gene=SCH69.19c;product=hypothetical protein;protein_id=NP_628037.1;transl_table=11
NC_003888.3	RefSeq	gene	4236466	4237524	.	-	.	ID=gene3877;Dbxref=GeneID:1099286;Name=SCH69.20c;gbkey=Gene;gene=SCH69.20c;gene_biotype=protein_coding;gene_synonym=SCH69.20c;locus_tag=SCO3850
NC_003888.3	RefSeq	CDS	4236466	4237524	.	-	0	ID=cds3804;Parent=gene3877;Dbxref=Genbank:NP_628038.1,GeneID:1099286;Name=NP_628038.1;Note=SCH69.20c%2C possible integral membrane protein%2C len: 352 aa%3B contains possible membrane spanning hydrophobic region. Similar to neighbouring gene SCH69.19c fasta scores%3B opt: 651%2C z-score: 547.1%2C E(): 2.3e-25%2C (45.9%25 identity in 218 aa overlap);gbkey=CDS;gene=SCH69.20c;product=hypothetical protein;protein_id=NP_628038.1;transl_table=11
NC_003888.3	RefSeq	gene	4237521	4238159	.	-	.	ID=gene3878;Dbxref=GeneID:1099287;Name=SCH69.21c;gbkey=Gene;gene=SCH69.21c;gene_biotype=protein_coding;gene_synonym=SCH69.21c;locus_tag=SCO3851
NC_003888.3	RefSeq	CDS	4237521	4238159	.	-	0	ID=cds3805;Parent=gene3878;Dbxref=Genbank:NP_628039.1,GeneID:1099287;Name=NP_628039.1;Note=aminodeoxychorismate synthase subunit PabA%3B with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis%3B PabA provides the glutamine amidotransferase activity;gbkey=CDS;gene=SCH69.21c;product=para-aminobenzoate synthase component II;protein_id=NP_628039.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4237590	4238150	.	-	.	ID=id4803;Dbxref=GeneID:1099287;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 340.00%2C E-value 2.7e-98.;gbkey=misc_feature;gene=SCH69.21c
NC_003888.3	RefSeq	gene	4238156	4238365	.	-	.	ID=gene3879;Dbxref=GeneID:1099288;Name=SCH69.22c;gbkey=Gene;gene=SCH69.22c;gene_biotype=protein_coding;gene_synonym=SCH69.22c;locus_tag=SCO3852
NC_003888.3	RefSeq	CDS	4238156	4238365	.	-	0	ID=cds3806;Parent=gene3879;Dbxref=Genbank:NP_628040.1,GeneID:1099288;Name=NP_628040.1;Note=SCH69.22c%2C membrane protein%2C len: 69 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCH69.22c;product=hypothetical protein;protein_id=NP_628040.1;transl_table=11
NC_003888.3	RefSeq	gene	4238399	4239112	.	-	.	ID=gene3880;Dbxref=GeneID:1099289;Name=SCH69.23c;gbkey=Gene;gene=SCH69.23c;gene_biotype=protein_coding;gene_synonym=SCH69.23c;locus_tag=SCO3853
NC_003888.3	RefSeq	CDS	4238399	4239112	.	-	0	ID=cds3807;Parent=gene3880;Dbxref=Genbank:NP_628041.1,GeneID:1099289;Name=NP_628041.1;Note=SCH69.23c%2C possible membrane protein%2C len: 237 aa%3B similar to TR:P71582 (EMBL:Z80233) hypothetical protein from Mycobacterium tuberculosis (262 aa) fasta scores%3B opt: 506%2C z-score: 588.6%2C E(): 1.9e-25%2C (39.8%25 identity in 236 aa overlap). Contains possible membrane spanning hydrophobic region at the N-terminus.;gbkey=CDS;gene=SCH69.23c;product=hypothetical protein;protein_id=NP_628041.1;transl_table=11
NC_003888.3	RefSeq	gene	4239330	4239584	.	+	.	ID=gene3881;Dbxref=GeneID:1099290;Name=SCH69.24;gbkey=Gene;gene=SCH69.24;gene_biotype=protein_coding;gene_synonym=SCH69.24;locus_tag=SCO3854
NC_003888.3	RefSeq	CDS	4239330	4239584	.	+	0	ID=cds3808;Parent=gene3881;Dbxref=Genbank:NP_628042.1,GeneID:1099290;Name=NP_628042.1;Note=integral membrane protein involved in inhibition of the Z-ring formation;gbkey=CDS;gene=SCH69.24;product=septation inhibitor protein;protein_id=NP_628042.1;transl_table=11
NC_003888.3	RefSeq	gene	4239852	4240745	.	-	.	ID=gene3882;Dbxref=GeneID:1099291;Name=SCH69.25c;gbkey=Gene;gene=SCH69.25c;gene_biotype=protein_coding;gene_synonym=SCH69.25c;locus_tag=SCO3855
NC_003888.3	RefSeq	CDS	4239852	4240745	.	-	0	ID=cds3809;Parent=gene3882;Dbxref=Genbank:NP_628043.1,GeneID:1099291;Name=NP_628043.1;Note=SCH69.25c%2C possible membrane protein%2C len: 297aa%3B similar to TR:O53632 (EMBL:AL021926) transmembrane protein from Mycobacterium tuberculosis (249 aa) fasta scores%3B opt: 552%2C z-score: 598.7%2C E(): 5.1e-26%2C (45.4%25 identity in 251 aa overlap). Contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SCH69.25c;product=hypothetical protein;protein_id=NP_628043.1;transl_table=11
NC_003888.3	RefSeq	gene	4240850	4241383	.	-	.	ID=gene3883;Dbxref=GeneID:1099292;Name=SCH69.26c;gbkey=Gene;gene=SCH69.26c;gene_biotype=protein_coding;gene_synonym=SCH69.26c;locus_tag=SCO3856
NC_003888.3	RefSeq	CDS	4240850	4241383	.	-	0	ID=cds3810;Parent=gene3883;Dbxref=Genbank:NP_628044.1,GeneID:1099292;Name=NP_628044.1;Note=SCH69.26c%2C probable peptidyl-prolyl cis-trans isomerase%2C len: 177aa%3B similar to many egs. TR:P77949 (EMBL:U64692) peptidyl-prolyl cis-trans isomerase from Streptomyces chrysomallus (175 aa) fasta scores%3B opt: 950%2C z-score: 1136.4%2C E(): 0%2C (78.3%25 identity in 175 aa overlap) and TR:O54168 (EMBL:AL021411) peptidyl-prolyl isomerase from Streptomyces coelicolor (157 aa) fasta scores%3B opt: 400%2C z-score: 486.8%2C E(): 8.8e-20%2C (50.0%25 identity in 124 aa overlap). Contains Pfam match to entry PF00160 pro_isomerase%2C Peptidyl-prolyl cis-trans isomerase.;gbkey=CDS;gene=SCH69.26c;product=peptidyl-prolyl cis-trans isomerase;protein_id=NP_628044.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4240862	4241374	.	-	.	ID=id4804;Dbxref=GeneID:1099292;Note=Pfam match to entry PF00160 pro_isomerase%2C Peptidyl-prolyl cis-trans isomerase%2C score 181.80%2C E-value 6.6e-52.;gbkey=misc_feature;gene=SCH69.26c
NC_003888.3	RefSeq	gene	4241704	4242402	.	+	.	ID=gene3884;Dbxref=GeneID:1099293;Name=SCH69.27;gbkey=Gene;gene=SCH69.27;gene_biotype=protein_coding;gene_synonym=SCH69.27;locus_tag=SCO3857
NC_003888.3	RefSeq	CDS	4241704	4242402	.	+	0	ID=cds3811;Parent=gene3884;Dbxref=Genbank:NP_628045.1,GeneID:1099293;Name=NP_628045.1;Note=SCH69.27%2C possible regulatory protein%2C len: 232aa%3B similar to SW:NHSR_STRAS proposed regulator of the nosiheptide-resistance genes from Streptomyces actuosus (233 aa) fasta scores%3B opt: 1231%2C z-score: 1330.5%2C E(): 0%2C (83.2%25 identity in 226 aa overlap).;gbkey=CDS;gene=SCH69.27;product=regulatory protein;protein_id=NP_628045.1;transl_table=11
NC_003888.3	RefSeq	gene	4242512	4243288	.	-	.	ID=gene3885;Dbxref=GeneID:1099294;Name=SCH69.28c;gbkey=Gene;gene=SCH69.28c;gene_biotype=protein_coding;gene_synonym=SCH69.28c;locus_tag=SCO3858
NC_003888.3	RefSeq	CDS	4242512	4243288	.	-	0	ID=cds3812;Parent=gene3885;Dbxref=Genbank:NP_628046.1,GeneID:1099294;Name=NP_628046.1;Note=catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;gene=SCH69.28c;product=UDP pyrophosphate synthase;protein_id=NP_628046.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4242515	4243192	.	-	.	ID=id4805;Dbxref=GeneID:1099294;Note=Pfam match to entry PF01255 UPF0015%2C Uncharacterized protein family UPF0015%2C score 271.00%2C E-value 1.6e-77.;gbkey=misc_feature;gene=SCH69.28c
NC_003888.3	RefSeq	gene	4243682	4243757	.	-	.	ID=gene3886;Dbxref=GeneID:3240035;Name=SCOt32;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt32
NC_003888.3	RefSeq	tRNA	4243682	4243757	.	-	.	ID=rna45;Parent=gene3886;Dbxref=GeneID:3240035;Note=tRNA Ala anticodon TGC%2C Cove score 77.32.;gbkey=tRNA;product=tRNA-Ala
NC_003888.3	RefSeq	exon	4243682	4243757	.	-	.	ID=id4806;Parent=rna45;Dbxref=GeneID:3240035;Note=tRNA Ala anticodon TGC%2C Cove score 77.32.;gbkey=tRNA;product=tRNA-Ala
NC_003888.3	RefSeq	gene	4243938	4244486	.	+	.	ID=gene3887;Dbxref=GeneID:1099295;Name=SCH69.29;gbkey=Gene;gene=SCH69.29;gene_biotype=protein_coding;gene_synonym=SCH69.29;locus_tag=SCO3859
NC_003888.3	RefSeq	CDS	4243938	4244486	.	+	0	ID=cds3813;Parent=gene3887;Dbxref=Genbank:NP_628047.1,GeneID:1099295;Name=NP_628047.1;Note=SCH69.29%2C possible DNA-binding protein%2C len: 182 aa%3B highly similar to TR:CAA09629 (EMBL:AJ011500) hypothetical protein from granaticin biosynthetic gene cluster of Streptomyces violaceoruber Tu22 (182 aa) fasta scores%3B opt: 1045%2C z-score: 1158.8%2C E(): 0%2C (90.1%25 identity in 182 aa overlap). Contains probable helix-turn-helix 38-59aa (+3.20 SD).;gbkey=CDS;gene=SCH69.29;product=DNA-binding protein;protein_id=NP_628047.1;transl_table=11
NC_003888.3	RefSeq	gene	4244573	4246303	.	+	.	ID=gene3888;Dbxref=GeneID:1099296;Name=SCH69.30;gbkey=Gene;gene=SCH69.30;gene_biotype=protein_coding;gene_synonym=SCH69.30;locus_tag=SCO3860
NC_003888.3	RefSeq	CDS	4244573	4246303	.	+	0	ID=cds3814;Parent=gene3888;Dbxref=Genbank:NP_628048.1,GeneID:1099296;Name=NP_628048.1;Note=SCH69.30%2C possible Ser/Thr protein kinase%2C len: 576 aa%3B similar to many e.g. TR:CAA09628 (EMBL:AJ011500)  Ser/Thr protein kinase from the granaticin biosynthetic gene cluster of Streptomyces violaceoruber Tu22 (433 aa) fasta scores%3B opt: 1791%2C z-score: 976.0%2C E(): 0%2C (65.2%25 identity in 428 aa overlap) and SW:PKAA_STRCO PkaA%2C Ser/Thr protein kinase (543 aa) fasta scores%3B opt: 576%2C z-score: 329.1%2C E(): 5.2e-11%2C (29.6%25 identity in 564 aa overlap). Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCH69.30;product=Ser/Thr protein kinase;protein_id=NP_628048.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4244597	4245325	.	+	.	ID=id4807;Dbxref=GeneID:1099296;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 122.80%2C E-value 5.7e-33.;gbkey=misc_feature;gene=SCH69.30
NC_003888.3	RefSeq	gene	4246345	4247670	.	-	.	ID=gene3889;Dbxref=GeneID:1099297;Name=SCH69.31c;gbkey=Gene;gene=SCH69.31c;gene_biotype=protein_coding;gene_synonym=SCH69.31c;locus_tag=SCO3861
NC_003888.3	RefSeq	CDS	4246345	4247670	.	-	0	ID=cds3815;Parent=gene3889;Dbxref=Genbank:NP_628049.1,GeneID:1099297;Name=NP_628049.1;Note=SCH69.31c%2C membrane protein%2C len: 441 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH69.31c;product=hypothetical protein;protein_id=NP_628049.1;transl_table=11
NC_003888.3	RefSeq	gene	4247800	4248081	.	-	.	ID=gene3890;Dbxref=GeneID:1099298;Name=SCH69.32c;gbkey=Gene;gene=SCH69.32c;gene_biotype=protein_coding;gene_synonym=SCH69.32c;locus_tag=SCO3862
NC_003888.3	RefSeq	CDS	4247800	4248081	.	-	0	ID=cds3816;Parent=gene3890;Dbxref=Genbank:NP_628050.1,GeneID:1099298;Name=NP_628050.1;Note=SCH69.32c%2C membrane protein%2C len: 93 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCH69.32c;product=hypothetical protein;protein_id=NP_628050.1;transl_table=11
NC_003888.3	RefSeq	gene	4248267	4248656	.	+	.	ID=gene3891;Dbxref=GeneID:1099299;Name=SCH69.33;gbkey=Gene;gene=SCH69.33;gene_biotype=protein_coding;gene_synonym=SCH69.33;locus_tag=SCO3863
NC_003888.3	RefSeq	CDS	4248267	4248656	.	+	0	ID=cds3817;Parent=gene3891;Dbxref=Genbank:NP_628051.1,GeneID:1099299;Name=NP_628051.1;Note=SCH69.33%2C hypothetical protein%2C len: 129 aa%3B similar to TR:CAA09663 (EMBL:AJ011500) hypothetical protein from the granaticin biosynthetic gene cluster of Streptomyces violaceoruber Tu22 (124 aa) fasta scores%3B opt: 259%2C z-score: 293.5%2C E(): 5.1e-09%2C (41.5%25 identity in 118 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCH69.33;product=hypothetical protein;protein_id=NP_628051.1;transl_table=11
NC_003888.3	RefSeq	gene	4248804	4249592	.	+	.	ID=gene3892;Dbxref=GeneID:1099300;Name=SCH18.01;gbkey=Gene;gene=SCH18.01;gene_biotype=protein_coding;gene_synonym=SCH18.01,SCH69.34;locus_tag=SCO3864
NC_003888.3	RefSeq	CDS	4248804	4249592	.	+	0	ID=cds3818;Parent=gene3892;Dbxref=Genbank:NP_733619.1,GeneID:1099300;Name=NP_733619.1;Note=SCH18.01%2C probable transcriptional regulator (fragment)%2C len: >70 aa%3B similar to TR:Q9X8D7 (EMBL:AL049573) Streptomyces coelicolor GntR-family transcriptional regulator SCE39.14c%2C 243 aa%3B fasta scores: opt: 142 z-score: 189.8 E(): 0.0042%3B 36.8%25 identity in 57 aa overlap. Overlaps with Streptomyces coelicolor transcriptional regulator (fragment) SCH69.34%2C 225 aa~SCH69.34%2C probable transcriptional regulator%2C len: >225aa%3B similar to many egs. TR:Q07191 (EMBL:Z19589) KorSA regulatory protein from the pSAM2 plasmid of Streptomyces ambofaciens (259 aa) fasta scores%3B opt: 224%2C z-score: 275.8%2C E(): 4.9e-08%2C (34.3%25 identity in 233 aa overlap) and SW:HUTC_KLEAE repressor for the histidine utilization genes of Klebsiella aerogenes (241 aa) fasta scores%3B opt: 180%2C z-score: 223.7%2C E(): 3.9e-05%2C (30.4%25 identity in 214 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and probable helix-turn-helix 29-50aa (+3.13 SD).;gbkey=CDS;gene=SCH18.01;product=transcriptional regulator;protein_id=NP_733619.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4248825	4249004	.	+	.	ID=id4808;Dbxref=GeneID:1099300;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 57.60%2C E-value 3e-16.;gbkey=misc_feature;gene=SCH18.01
NC_003888.3	RefSeq	gene	4249601	4250383	.	+	.	ID=gene3893;Dbxref=GeneID:1099301;Name=SCH18.02;gbkey=Gene;gene=SCH18.02;gene_biotype=protein_coding;gene_synonym=SCH18.02;locus_tag=SCO3865
NC_003888.3	RefSeq	CDS	4249601	4250383	.	+	0	ID=cds3819;Parent=gene3893;Dbxref=Genbank:NP_628052.1,GeneID:1099301;Name=NP_628052.1;Note=SCH18.02%2C hypothetical protein%2C len: 260 aa%3B similar to TR:CAB72374 (EMBL:AL138977) Streptomyces coelicolor hypothetical 27.3 kD protein SC7F9.21c%2C 247 aa%3B fasta scores: opt: 296 z-score: 343.9 E(): 1.1e-11%3B 32.9%25 identity in 234 aa overlap. Contains and match to Prosite entry;gbkey=CDS;gene=SCH18.02;product=hypothetical protein;protein_id=NP_628052.1;transl_table=11
NC_003888.3	RefSeq	gene	4250514	4251389	.	-	.	ID=gene3894;Dbxref=GeneID:1099302;Name=SCH18.03c;gbkey=Gene;gene=SCH18.03c;gene_biotype=protein_coding;gene_synonym=SCH18.03c;locus_tag=SCO3866
NC_003888.3	RefSeq	CDS	4250514	4251389	.	-	0	ID=cds3820;Parent=gene3894;Dbxref=Genbank:NP_628053.1,GeneID:1099302;Name=NP_628053.1;Note=SCH18.03c%2C hypothetical protein%2C len: 291 aa%3B similar to TR:P74357 (EMBL:D90914) Synechocystis sp. hypothetical 43.7 kD protein%2C 368 aa%3B fasta scores: opt: 243 z-score: 281.6 E(): 3.3e-08%3B 29.1%25 identity in 206 aa overlap;gbkey=CDS;gene=SCH18.03c;product=hypothetical protein;protein_id=NP_628053.1;transl_table=11
NC_003888.3	RefSeq	gene	4251449	4251661	.	-	.	ID=gene3895;Dbxref=GeneID:1099303;Name=SCH18.04c;gbkey=Gene;gene=SCH18.04c;gene_biotype=protein_coding;gene_synonym=SCH18.04c,soyB1;locus_tag=SCO3867
NC_003888.3	RefSeq	CDS	4251449	4251661	.	-	0	ID=cds3821;Parent=gene3895;Dbxref=Genbank:NP_628054.1,GeneID:1099303;Name=NP_628054.1;Note=SCH18.04c%2C soyB1%2C probable ferredoxin%2C len: 70 aa%3B similar to SW:FERS_STRGR (EMBL:X63601) Streptomyces griseus ferredoxin Soy%2C SoyB%2C 65 aa%3B fasta scores: opt: 169 z-score: 239.4 E(): 7.3e-06%3B 44.4%25 identity in 63 aa ovelap;gbkey=CDS;gene=SCH18.04c;product=ferredoxin;protein_id=NP_628054.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4251667	4251670	.	-	.	ID=id4809;gbkey=RBS
NC_003888.3	RefSeq	gene	4251867	4252493	.	+	.	ID=gene3896;Dbxref=GeneID:1099304;Name=SCH18.05;gbkey=Gene;gene=SCH18.05;gene_biotype=protein_coding;gene_synonym=SCH18.05;locus_tag=SCO3868
NC_003888.3	RefSeq	CDS	4251867	4252493	.	+	0	ID=cds3822;Parent=gene3896;Dbxref=Genbank:NP_628055.1,GeneID:1099304;Name=NP_628055.1;Note=SCH18.05%2C unknown%2C len: 208 aa;gbkey=CDS;gene=SCH18.05;product=hypothetical protein;protein_id=NP_628055.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	4252528	4252591	.	+	.	ID=id4810;Note=possible stem-loop: 3150 - GCGTCGGCATGGTTTGGCCCCGGTCCC 3176 - 3187 GGGACCGGTGCCAAACCATGCCGGCGC 3213. Score 67: 25/27 (92%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	4252853	4252857	.	+	.	ID=id4811;gbkey=RBS
NC_003888.3	RefSeq	gene	4252857	4257887	.	+	.	ID=gene3897;Dbxref=GeneID:1099305;Name=SCH18.06;gbkey=Gene;gene=SCH18.06;gene_biotype=protein_coding;gene_synonym=SCH18.06;locus_tag=SCO3869
NC_003888.3	RefSeq	CDS	4252857	4257887	.	+	0	ID=cds3823;Parent=gene3897;Dbxref=Genbank:NP_628056.1,GeneID:1099305;Name=NP_628056.1;Note=SCH18.06%2C probable WD-40 repeat protein%2C len: 1676 aa%3B C-terminal domain identical to previously sequenced TR:Q9ZEM4 (EMBL:AJ131817) Streptomyces coelicolor WD-40 repeat protein WdpA%2C 1049 aa%3B fasta scores: opt: 7025 z-score: 5917.8 E(): 0%3B 99.8%25 identity in 1049 aa overlap. Contains 13x Pfam matches to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C 9x matches to Prosite entry PS00678 Trp-Asp (WD) repeats signature and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCH18.06;product=WD-40 repeat-containing protein;protein_id=NP_628056.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4253403	4253426	.	+	.	ID=id4812;Dbxref=GeneID:1099305;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4254311	4258462	.	+	.	ID=id4813;Note=previously sequenced DNA fragment EMBL:AJ131817 Streptomyces coelicolor wdpA gene;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4255896	4256012	.	+	.	ID=id4814;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 35.30%2C E-value 1.4e-06;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4255971	4256015	.	+	.	ID=id4815;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256034	4256150	.	+	.	ID=id4816;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 48.10%2C E-value 1.9e-10;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256109	4256153	.	+	.	ID=id4817;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256172	4256288	.	+	.	ID=id4818;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 31.50%2C E-value 2e-05;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256247	4256291	.	+	.	ID=id4819;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256307	4256423	.	+	.	ID=id4820;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 40.80%2C E-value 3.1e-08;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256382	4256426	.	+	.	ID=id4821;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256445	4256561	.	+	.	ID=id4822;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 36.00%2C E-value 8.6e-07;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256520	4256564	.	+	.	ID=id4823;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256583	4256699	.	+	.	ID=id4824;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 35.60%2C E-value 1.1e-06;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256721	4256837	.	+	.	ID=id4825;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 25.80%2C E-value 0.001;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256841	4256936	.	+	.	ID=id4826;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 3.50%2C E-value 19;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256895	4256939	.	+	.	ID=id4827;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4256958	4257074	.	+	.	ID=id4828;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 2.50%2C E-value 26;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4257114	4257218	.	+	.	ID=id4829;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 13.10%2C E-value 1;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4257177	4257221	.	+	.	ID=id4830;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4257240	4257356	.	+	.	ID=id4831;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 46.30%2C E-value 7e-10;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4257315	4257359	.	+	.	ID=id4832;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4257378	4257494	.	+	.	ID=id4833;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 43.30%2C E-value 5.3e-09;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4257453	4257497	.	+	.	ID=id4834;Dbxref=GeneID:1099305;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	sequence_feature	4257516	4257632	.	+	.	ID=id4835;Dbxref=GeneID:1099305;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 43.60%2C E-value 4.4e-09;gbkey=misc_feature;gene=SCH18.06
NC_003888.3	RefSeq	gene	4258228	4258428	.	-	.	ID=gene3898;Dbxref=GeneID:1099306;Name=SCH18.07c;gbkey=Gene;gene=SCH18.07c;gene_biotype=protein_coding;gene_synonym=SCH18.07c;locus_tag=SCO3870
NC_003888.3	RefSeq	CDS	4258228	4258428	.	-	0	ID=cds3824;Parent=gene3898;Dbxref=Genbank:NP_628057.1,GeneID:1099306;Name=NP_628057.1;Note=SCH18.07c%2C possible integral membrane protein%2C len: 66 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH18.07c;product=hypothetical protein;protein_id=NP_628057.1;transl_table=11
NC_003888.3	RefSeq	gene	4258993	4259403	.	+	.	ID=gene3899;Dbxref=GeneID:1099307;Name=SCH18.08;gbkey=Gene;gene=SCH18.08;gene_biotype=protein_coding;gene_synonym=SCH18.08;locus_tag=SCO3871
NC_003888.3	RefSeq	CDS	4258993	4259403	.	+	0	ID=cds3825;Parent=gene3899;Dbxref=Genbank:NP_628058.1,GeneID:1099307;Name=NP_628058.1;Note=SCH18.08%2C possible decarboxylase%2C len: 136 aa%3B similar to TR:O26336 (EMBL:AE000810) Methanobacterium thermoautotrophicum gamma-carboxymuconolactone decarboxylase Mth234%2C 125 aa%3B fasta scores: opt: 231 z-score: 310.2 E(): 8.3e-10%3B 38.3%25 identity in 107 aa overlap;gbkey=CDS;gene=SCH18.08;product=decarboxylase;protein_id=NP_628058.1;transl_table=11
NC_003888.3	RefSeq	gene	4259791	4259867	.	-	.	ID=gene3900;Dbxref=GeneID:3240036;Name=SCOt33;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt33
NC_003888.3	RefSeq	tRNA	4259791	4259867	.	-	.	ID=rna46;Parent=gene3900;Dbxref=GeneID:3240036;Note=tRNA Ile anticodon GAT%2C Cove score 97.97;gbkey=tRNA;product=tRNA-Ile
NC_003888.3	RefSeq	exon	4259791	4259867	.	-	.	ID=id4836;Parent=rna46;Dbxref=GeneID:3240036;Note=tRNA Ile anticodon GAT%2C Cove score 97.97;gbkey=tRNA;product=tRNA-Ile
NC_003888.3	RefSeq	gene	4259979	4260536	.	-	.	ID=gene3901;Dbxref=GeneID:1099308;Name=SCH18.09c;gbkey=Gene;gene=SCH18.09c;gene_biotype=protein_coding;gene_synonym=SCH18.09c;locus_tag=SCO3872
NC_003888.3	RefSeq	CDS	4259979	4260536	.	-	0	ID=cds3826;Parent=gene3901;Dbxref=Genbank:NP_628059.1,GeneID:1099308;Name=NP_628059.1;Note=SCH18.09c%2C possible integral membrane protein%2C len: 185 aa%3B similar to TR:P71575 (EMBL:Z80233) Mycobacterium tuberculosis hypothetical 31.3 kD protein CY10H4.05%2C 304 aa%3B fasta scores: opt: 315 z-score: 339.9 E(): 1.8e-11%3B 32.8%25 identity in 195 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH18.09c;product=hypothetical protein;protein_id=NP_628059.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4260549	4268748	.	-	.	ID=id4837;Note=previously sequenced DNA fragment EMBL:L27063 Streptomyces coelicolor dnaA-gyrA region.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4260741	4263314	.	-	.	ID=gene3902;Dbxref=GeneID:1099309;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;gene_synonym=gyrA,SCH18.10c;locus_tag=SCO3873
NC_003888.3	RefSeq	CDS	4260741	4263314	.	-	0	ID=cds3827;Parent=gene3902;Dbxref=Genbank:NP_628060.1,GeneID:1099309;Name=NP_628060.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrA;product=DNA gyrase subunit A;protein_id=NP_628060.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4261851	4263206	.	-	.	ID=id4838;Dbxref=GeneID:1099309;Note=Pfam match to entry PF00521 DNA_topoisoIV%2C DNA gyrase/topoisomerase IV%2C subunit A%2C score 1014.80%2C E-value 0;gbkey=misc_feature;gene=gyrA
NC_003888.3	RefSeq	gene	4263378	4265438	.	-	.	ID=gene3903;Dbxref=GeneID:1099310;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;gene_synonym=SCH18.11c;locus_tag=SCO3874
NC_003888.3	RefSeq	CDS	4263378	4265438	.	-	0	ID=cds3828;Parent=gene3903;Dbxref=Genbank:NP_628061.1,GeneID:1099310;Name=NP_628061.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=NP_628061.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4263414	4263611	.	-	.	ID=id4839;Dbxref=GeneID:1099310;Note=Pfam match to entry PF00986 DNA_gyraseB_C%2C DNA gyrase B subunit%2C carboxyl terminus%2C score 133.60%2C E-value 3.5e-36;gbkey=misc_feature;gene=gyrB
NC_003888.3	RefSeq	sequence_feature	4263639	4265327	.	-	.	ID=id4840;Dbxref=GeneID:1099310;Note=Pfam match to entry PF00204 DNA_topoisoII%2C DNA topoisomerase II (N-terminal region)%2C score 1099.40%2C E-value 0;gbkey=misc_feature;gene=gyrB
NC_003888.3	RefSeq	sequence_feature	4264008	4264034	.	-	.	ID=id4841;Dbxref=GeneID:1099310;Note=PS00177 DNA topoisomerase II signature;gbkey=misc_feature;gene=gyrB
NC_003888.3	RefSeq	gene	4265873	4266445	.	-	.	ID=gene3904;Dbxref=GeneID:1099311;Name=SCH18.12c;gbkey=Gene;gene=SCH18.12c;gene_biotype=protein_coding;gene_synonym=SCH18.12c;locus_tag=SCO3875
NC_003888.3	RefSeq	CDS	4265873	4266445	.	-	0	ID=cds3829;Parent=gene3904;Dbxref=Genbank:NP_628062.1,GeneID:1099311;Name=NP_628062.1;Note=SCH18.12c%2C hypothetical protein%2C len: 190 aa%3B identical to previously sequenced SW:YREG_STRCO (EMBL:L27063%3B) Streptomyces coelicolor hypothetical 19.8 kD protein in RedF-GyrB intergenic region%2C 190 aa. Similar to many eg. TR:P71573 (EMBL:Z80233) hypothetical protein from Mycobacterium tuberculosis (187 aa) fasta scores%3B opt: 404%2C Z-score: 424.8%2C E(): 5e-16%2C 40.741%25 identity (44.767%25 ungapped) in 189 aa overlap.;gbkey=CDS;gene=SCH18.12c;product=hypothetical protein;protein_id=NP_628062.1;transl_table=11
NC_003888.3	RefSeq	gene	4266442	4267563	.	-	.	ID=gene3905;Dbxref=GeneID:1099312;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;gene_synonym=SCH18.13c;locus_tag=SCO3876
NC_003888.3	RefSeq	CDS	4266442	4267563	.	-	0	ID=cds3830;Parent=gene3905;Dbxref=Genbank:NP_628063.1,GeneID:1099312;Name=NP_628063.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=recombination protein F;protein_id=NP_628063.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4266451	4266768	.	-	.	ID=id4842;Dbxref=GeneID:1099312;Note=Pfam match to entry PF00470 RecF%2C RecF protein%2C score 7.40%2C E-value 0.38;gbkey=misc_feature;gene=recF
NC_003888.3	RefSeq	ribosome_entry_site	4266451	4266454	.	-	.	ID=id4843;Dbxref=GeneID:1099312;gbkey=RBS;gene=recF
NC_003888.3	RefSeq	sequence_feature	4266562	4266615	.	-	.	ID=id4844;Dbxref=GeneID:1099312;Note=PS00618 RecF protein signature 2;gbkey=misc_feature;gene=recF
NC_003888.3	RefSeq	sequence_feature	4267066	4267218	.	-	.	ID=id4845;Dbxref=GeneID:1099312;Note=Pfam match to entry PF00470 RecF%2C RecF protein%2C score 0.80%2C E-value 25;gbkey=misc_feature;gene=recF
NC_003888.3	RefSeq	sequence_feature	4267153	4267230	.	-	.	ID=id4846;Dbxref=GeneID:1099312;Note=PS00617 RecF protein signature 1;gbkey=misc_feature;gene=recF
NC_003888.3	RefSeq	sequence_feature	4267426	4267557	.	-	.	ID=id4847;Dbxref=GeneID:1099312;Note=Pfam match to entry PF00470 RecF%2C RecF protein%2C score 18.60%2C E-value 0.0003;gbkey=misc_feature;gene=recF
NC_003888.3	RefSeq	sequence_feature	4267453	4267476	.	-	.	ID=id4848;Dbxref=GeneID:1099312;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=recF
NC_003888.3	RefSeq	gene	4267594	4268469	.	-	.	ID=gene3906;Dbxref=GeneID:1099313;Name=SCH18.14c;gbkey=Gene;gene=SCH18.14c;gene_biotype=protein_coding;gene_synonym=SCH18.14c;locus_tag=SCO3877
NC_003888.3	RefSeq	CDS	4267594	4268469	.	-	0	ID=cds3831;Parent=gene3906;Dbxref=Genbank:NP_628064.1,GeneID:1099313;Name=NP_628064.1;Note=similar to full-length Gnd%2C these proteins seems to have a truncated C-terminal 6PGD domainin%3B in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate;gbkey=CDS;gene=SCH18.14c;product=6-phosphogluconate dehydrogenase;protein_id=NP_628064.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4267675	4268355	.	-	.	ID=id4849;Dbxref=GeneID:1099313;Note=Pfam match to entry PF00393 6PGD%2C 6-phosphogluconate dehydrogenases%2C score 171.80%2C E-value 1.2e-47;gbkey=misc_feature;gene=SCH18.14c
NC_003888.3	RefSeq	repeat_region	4268688	4268695	.	+	.	ID=id4850;Note=5x degenerate repeat: CTCAGCCG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4268696	4268703	.	+	.	ID=id4851;Note=5x degenerate repeat: CTCAGCCG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4268704	4268711	.	+	.	ID=id4852;Note=5x degenerate repeat: CTCAGCCG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4268712	4268719	.	+	.	ID=id4853;Note=5x degenerate repeat: CTCAGCCG;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4268713	4272600	.	-	.	ID=id4854;Note=previlusly sequenced DNA fragment EMBL:AF187159 Streptomyces coelicolor TrxB (trxB) gene%2C partial cds%3B and TrxA (trxA)%2C Orf205%2C ParB (parB)%2C ParA (parA)%2C GidB (gidB)%2C Jag (jag)%2C Orf431%2C Orf124%2C RNase P protein (rnpB)%2C ribosomal protein rpmH (rpmH)%2C DnaA (dnaA)%2C and DnaN (dnaN) genes%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4268713	4269843	.	-	.	ID=gene3907;Dbxref=GeneID:1099314;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;gene_synonym=dnaN,SCH18.15c;locus_tag=SCO3878
NC_003888.3	RefSeq	CDS	4268713	4269843	.	-	0	ID=cds3832;Parent=gene3907;Dbxref=Genbank:NP_628065.1,GeneID:1099314;Name=NP_628065.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;gene=dnaN;product=DNA polymerase III subunit beta;protein_id=NP_628065.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4268720	4268727	.	+	.	ID=id4855;Note=5x degenerate repeat: CTCAGCCG;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	4268752	4269843	.	-	.	ID=id4856;Dbxref=GeneID:1099314;Note=Pfam match to entry PF00712 DNA_pol3_beta%2C DNA polymerase III beta subunit%2C score 591.40%2C E-value 5.7e-174;gbkey=misc_feature;gene=dnaN
NC_003888.3	RefSeq	ribosome_entry_site	4269852	4269857	.	-	.	ID=id4857;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	4269853	4270777	.	-	.	ID=id4858;Note=intergenic region between dnaA and dnaN genes. Identical to Streptomyces lividans oriC region TR:AF077942 EMBL:187159;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4270778	4272748	.	-	.	ID=gene3908;Dbxref=GeneID:1099315;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;gene_synonym=SCH18.16c,StH24.01c;locus_tag=SCO3879
NC_003888.3	RefSeq	CDS	4270778	4272748	.	-	0	ID=cds3833;Parent=gene3908;Dbxref=Genbank:NP_733620.1,GeneID:1099315;Name=NP_733620.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiation protein;protein_id=NP_733620.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4270853	4271800	.	-	.	ID=id4859;Dbxref=GeneID:1099315;Note=Pfam match to entry PF00308 bac_dnaA%2C Bacterial dnaA protein%2C score 737.40%2C E-value 2.7e-248;gbkey=misc_feature;gene=dnaA
NC_003888.3	RefSeq	sequence_feature	4270853	4270912	.	-	.	ID=id4860;Dbxref=GeneID:1099315;Note=PS01008 DnaA protein signature;gbkey=misc_feature;gene=dnaA
NC_003888.3	RefSeq	sequence_feature	4271657	4271680	.	-	.	ID=id4861;Dbxref=GeneID:1099315;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=dnaA
NC_003888.3	RefSeq	repeat_region	4271957	4272055	.	-	.	ID=id4862;Dbxref=GeneID:1099315;Note=5x repeat unit translated into dnaA;gbkey=repeat_region;gene=dnaA
NC_003888.3	RefSeq	sequence_feature	4272503	4273732	.	-	.	ID=id4863;Note=sequence corresponding to EMBL:M82836 from 1 to 1230;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4272640	4273058	.	-	.	ID=id4864;Note=identical to Streptomyces lividans dnaA transcription regulator (P1 and P2 promoters) 1 to 419 (EMBL:S69180);gbkey=misc_feature
NC_003888.3	RefSeq	protein_binding_site	4272884	4272892	.	-	.	ID=id4865;Note=dnaA box;gbkey=protein_bind
NC_003888.3	RefSeq	protein_binding_site	4272896	4272904	.	-	.	ID=id4866;Note=dnaA box;gbkey=protein_bind
NC_003888.3	RefSeq	gene	4273127	4273264	.	+	.	ID=gene3909;Dbxref=GeneID:1099316;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;gene_synonym=StH24.02;locus_tag=SCO3880
NC_003888.3	RefSeq	CDS	4273127	4273264	.	+	0	ID=cds3834;Parent=gene3909;Dbxref=Genbank:NP_628066.1,GeneID:1099316;Name=NP_628066.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=NP_628066.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4273130	4273261	.	+	.	ID=id4867;Dbxref=GeneID:1099316;Note=Pfam match to entry PF00468 Ribosomal_L34%2C Ribosomal protein L34%2C score 75.20%2C E-value 1.2e-20;gbkey=misc_feature;gene=rpmH
NC_003888.3	RefSeq	sequence_feature	4273133	4273192	.	+	.	ID=id4868;Dbxref=GeneID:1099316;Note=PS00784 Ribosomal protein L34 signature;gbkey=misc_feature;gene=rpmH
NC_003888.3	RefSeq	gene	4273286	4273657	.	+	.	ID=gene3910;Dbxref=GeneID:1099317;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;gene_synonym=rnpA,StH24.03;locus_tag=SCO3881
NC_003888.3	RefSeq	CDS	4273286	4273657	.	+	0	ID=cds3835;Parent=gene3910;Dbxref=Genbank:NP_628067.1,GeneID:1099317;Name=NP_628067.1;Note=StH24.03%2C rnpA%2C probable ribonuclease P component%2C len: 123 aa%3B previously sequenced as SW:RNPA_STRCO (EMBL:M82836)%2C RnpA. Similar to SW:RNPA_STRBI (EMBL:M83112)%2C rnpA%2C Streptomyces bikiniensis ribonuclease P protein component (123 aa)%2C fasta scores%3B opt: 704 z-score: 879.0 E(): 0%2C 88.6%25 identity in 123 aa overlap .Contains Pfam match to entry PF00825 Ribonuclease_P%2C Ribonuclease P%2C score 179.50%2C E-value 5.3e-50 and PS00648 Bacterial Ribonuclease P protein component signature;gbkey=CDS;gene=rnpA;product=ribonuclease P component;protein_id=NP_628067.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4273289	4273639	.	+	.	ID=id4869;Dbxref=GeneID:1099317;Note=Pfam match to entry PF00825 Ribonuclease_P%2C Ribonuclease P%2C score 179.50%2C E-value 5.3e-50;gbkey=misc_feature;gene=rnpA
NC_003888.3	RefSeq	sequence_feature	4273463	4273507	.	+	.	ID=id4870;Dbxref=GeneID:1099317;Note=PS00648 Bacterial Ribonuclease P protein component signature;gbkey=misc_feature;gene=rnpA
NC_003888.3	RefSeq	sequence_feature	4273562	4280235	.	-	.	ID=id4871;Note=sequence corresponding to EMBL:Y16311;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4273654	4274028	.	+	.	ID=gene3911;Dbxref=GeneID:1099318;Name=StH24.04;gbkey=Gene;gene=StH24.04;gene_biotype=protein_coding;gene_synonym=StH24.04;locus_tag=SCO3882
NC_003888.3	RefSeq	CDS	4273654	4274028	.	+	0	ID=cds3836;Parent=gene3911;Dbxref=Genbank:NP_628068.1,GeneID:1099318;Name=NP_628068.1;Note=StH24.04%2C conserved hypothetical protein%2C len: 124 aa%3B previously sequenced as TR:O54625 (EMBL:Y16311) Streptomyces coelicolor hypothetical protein (124 aa). Similar to many bacterial proteins from RnpA region e.g. YIDD_PROMI (EMBL:M58352) Proteus mirabilis hypothetical protein (86 aa)%2C fasta scores%3B opt: 278 z-score: 336.6 E(): 2e-11%2C 57.4%25 identity in 68 aa overlap. Also similar to haemolysins e.g. TR:Q44066 (EMBL:L36462)%2C HylA%2C Aeromonas hydrophila alpha-hemolysin (85 aa) (54.5%25 identity in 66 aa overlap);gbkey=CDS;gene=StH24.04;product=hypothetical protein;protein_id=NP_628068.1;transl_table=11
NC_003888.3	RefSeq	gene	4274032	4275327	.	+	.	ID=gene3912;Dbxref=GeneID:1099319;Name=StH24.05;gbkey=Gene;gene=StH24.05;gene_biotype=protein_coding;gene_synonym=StH24.05;locus_tag=SCO3883
NC_003888.3	RefSeq	CDS	4274032	4275327	.	+	0	ID=cds3837;Parent=gene3912;Dbxref=Genbank:NP_628069.1,GeneID:1099319;Name=NP_628069.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;gene=StH24.05;product=inner membrane protein translocase component YidC;protein_id=NP_628069.1;transl_table=11
NC_003888.3	RefSeq	gene	4275343	4275855	.	+	.	ID=gene3913;Dbxref=GeneID:1099320;Name=SCH24.06;gbkey=Gene;gene=SCH24.06;gene_biotype=protein_coding;gene_synonym=SCH24.06;locus_tag=SCO3884
NC_003888.3	RefSeq	CDS	4275343	4275855	.	+	0	ID=cds3838;Parent=gene3913;Dbxref=Genbank:NP_628070.1,GeneID:1099320;Name=NP_628070.1;Note=SCH24.06%2C conserved hypothetical protein%2C len: 170 aa%3B previously sequenced as TR:O54595 (EMBL:Y16311) Streptomyces coelicolor jag-like protein (170 aa). Similar to SW:JAG_BACSU (EMBL:Z14225)%2C jag%2C Bacillus subtilis SpoIIIJ associated protein (208 aa)%2C fasta scores%3B opt: 231 z-score: 268.4 E(): 1.1e-07%2C 31.7%25 identity in 139 aa overlap%2C and other jag homologs e.g. TR:O53598 (EMBL:AL021426) Mycobacterium tuberculosis hypothetical protein (187 aa) (62.7%25 identity in 169 aa overlap);gbkey=CDS;gene=SCH24.06;product=hypothetical protein;protein_id=NP_628070.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4275968	4275971	.	+	.	ID=id4872;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4275980	4276699	.	+	.	ID=gene3914;Dbxref=GeneID:1099321;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;gene_synonym=StH24.07;locus_tag=SCO3885
NC_003888.3	RefSeq	CDS	4275980	4276699	.	+	0	ID=cds3839;Parent=gene3914;Dbxref=Genbank:NP_628071.1,GeneID:1099321;Name=NP_628071.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=16S rRNA methyltransferase GidB;protein_id=NP_628071.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4276831	4276849	.	+	.	ID=id4873;Note=repeat 4%3B 19 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4277128	4277146	.	+	.	ID=id4874;Note=repeat 4%3B 19 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4277251	4278078	.	+	.	ID=gene3915;Dbxref=GeneID:1099322;Name=StH24.08;gbkey=Gene;gene=StH24.08;gene_biotype=protein_coding;gene_synonym=StH24.08;locus_tag=SCO3886
NC_003888.3	RefSeq	CDS	4277251	4278078	.	+	0	ID=cds3840;Parent=gene3915;Dbxref=Genbank:NP_628072.1,GeneID:1099322;Name=NP_628072.1;Note=StH24.08%2C possible partitioning or sporulation protein%2C len: 275 aa%3B previously sequenced as TR:O07328 (EMBL:Y16311) Streptomyces coelicolor hypothetical protein (255 aa)%2C but with a different stop codon position. Similar to many e.g. SW:SOJ_BACSU (EMBL:D26185)%2C SOJ%2C Bacillus subtilis sporulation protein (253 aa)%2C fasta scores%3B opt: 899 z-score: 1077.0 E(): 0%2C 56.6%25 identity in 251 aa overlap%2C TR:O05189 (EMBL:U87804)%2C parA%2C Caulobacter crescentus chromosome partitioning protein (266 aa) (49.2%25 identity in 248 aa overlap) and TR:O53596 (EMBL:AL021426)%2C parB%2C Mycobacterium tuberculosis hypothetical protein (347 aa) (64.3%25 identity in 249 aa overlap). Contains Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 123.30%2C E-value 4.4e-33. Contains probable coiled-coil from 86 to 114 (29 residues) (Max score: 1.424%2C probability 0.80);gbkey=CDS;gene=StH24.08;product=partitioning or sporulation protein;protein_id=NP_628072.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4277491	4277826	.	+	.	ID=id4875;Dbxref=GeneID:1099322;Note=Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 123.30%2C E-value 4.4e-33;gbkey=misc_feature;gene=StH24.08
NC_003888.3	RefSeq	repeat_region	4277542	4277570	.	+	.	ID=id4876;Dbxref=GeneID:1099322;Note=repeat 3%3B 29 bp imperfect inverted repeat;gbkey=repeat_region;gene=StH24.08
NC_003888.3	RefSeq	gene	4278195	4279181	.	+	.	ID=gene3916;Dbxref=GeneID:1099323;Name=StH24.09;gbkey=Gene;gene=StH24.09;gene_biotype=protein_coding;gene_synonym=StH24.09;locus_tag=SCO3887
NC_003888.3	RefSeq	CDS	4278195	4279181	.	+	0	ID=cds3841;Parent=gene3916;Dbxref=Genbank:NP_628073.1,GeneID:1099323;Name=NP_628073.1;Note=StH24.09%2C possible partitioning or sporulation protein%2C len: 328 aa%3B previously sequenced as TR:O07327 (EMBL:Y16311)%2C but with different start codon. Similar to many e.g. SW:SP0J_BACSU (EMBL:D26185)%2C spo0J%2C Bacillus subtilis stage 0 sporulation protein (282 aa)%2C fasta scores%3B opt: 686 z-score: 757.0 E(): 0%2C 42.7%25 identity in 262 aa overlap%2C TR:O05190 (EMBL:U87804)%2C parB%2C Caulobacter crescentus chromosome partitioning protein (293 aa) (37.1%25 identity in 264 aa overlap) and TR:O53595 (EMBL:AL021426)%2C parA%2C Mycobacterium tuberculosis hypothetical protein (344 aa) (51.4%25 identity in 360 aa overlap). Contains probable helix-turn-helix motif at aa 160-181 (Score 1587%2C +4.59 SD);gbkey=CDS;gene=StH24.09;product=partitioning or sporulation protein;protein_id=NP_628073.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4278622	4278650	.	+	.	ID=id4877;Dbxref=GeneID:1099323;Note=repeat 3%3B 29 bp imperfect inverted repeat;gbkey=repeat_region;gene=StH24.09
NC_003888.3	RefSeq	gene	4279519	4280136	.	+	.	ID=gene3917;Dbxref=GeneID:1099324;Name=StH24.10;gbkey=Gene;gene=StH24.10;gene_biotype=protein_coding;gene_synonym=StH24.10;locus_tag=SCO3888
NC_003888.3	RefSeq	CDS	4279519	4280136	.	+	0	ID=cds3842;Parent=gene3917;Dbxref=Genbank:NP_628074.1,GeneID:1099324;Name=NP_628074.1;Note=StH24.10%2C conserved hypothetical protein%2C len: 205 aa%3B previously sequenced as TR:O07326 (EMBL:AF031590)%2C unknown function%2C similar to TR:O53594 (EMBL:AL021426) Mycobacterium tuberculosis hypothetical protein (244 aa)%2C fasta scores%3B opt: 392 z-score: 473.7 E(): 4.5e-19%2C 40.2%25 identity in 234 aa overlap and TR:Q50200 (EMBL:L39923) hypothetical protein (259 aa) (39.6%25 identity in 240 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 17.80%2C E-value 0.018;gbkey=CDS;gene=StH24.10;product=hypothetical protein;protein_id=NP_628074.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4279522	4279998	.	+	.	ID=id4878;Dbxref=GeneID:1099324;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 17.80%2C E-value 0.018;gbkey=misc_feature;gene=StH24.10
NC_003888.3	RefSeq	sequence_feature	4280137	4284160	.	-	.	ID=id4879;Note=sequence corresponding to EMBL:AJ007313;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4280212	4280544	.	-	.	ID=gene3918;Dbxref=GeneID:1099325;Name=SCH24.11c;gbkey=Gene;gene=SCH24.11c;gene_biotype=protein_coding;gene_synonym=SCH24.11c,trxA;locus_tag=SCO3889
NC_003888.3	RefSeq	CDS	4280212	4280544	.	-	0	ID=cds3843;Parent=gene3918;Dbxref=Genbank:NP_628075.1,GeneID:1099325;Name=NP_628075.1;Note=SCH24.11c%2C trxA%2C thioredoxin%2C len: 110 aa%3B previously sequenced (EMBL:AJ007313)%2C TrxA. Contains Pfam match to entry PF00085 thiored%2C Thioredoxin%2C score 140.90%2C E-value 3.6e-41 and PS00194 Thioredoxin family active site;gbkey=CDS;gene=SCH24.11c;product=thioredoxin;protein_id=NP_628075.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4280218	4280541	.	-	.	ID=id4880;Dbxref=GeneID:1099325;Note=Pfam match to entry PF00085 thiored%2C Thioredoxin%2C score 140.90%2C E-value 3.6e-41;gbkey=misc_feature;gene=SCH24.11c
NC_003888.3	RefSeq	sequence_feature	4280416	4280472	.	-	.	ID=id4881;Dbxref=GeneID:1099325;Note=PS00194 Thioredoxin family active site;gbkey=misc_feature;gene=SCH24.11c
NC_003888.3	RefSeq	gene	4280583	4281551	.	-	.	ID=gene3919;Dbxref=GeneID:1099326;Name=SCH24.12c;gbkey=Gene;gene=SCH24.12c;gene_biotype=protein_coding;gene_synonym=SCH24.12c,trxB;locus_tag=SCO3890
NC_003888.3	RefSeq	CDS	4280583	4281551	.	-	0	ID=cds3844;Parent=gene3919;Dbxref=Genbank:NP_628076.1,GeneID:1099326;Name=NP_628076.1;Note=SCH24.12c%2C trxB%2C thioredoxin reductase (NADPH)%2C len: 322 aa%3B previously sequenced as SW:TRXB_STRCO (EMBL:AJ007313)%2C TrxB. Contains PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site;gbkey=CDS;gene=SCH24.12c;product=thioredoxin reductase;protein_id=NP_628076.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4281084	4281146	.	-	.	ID=id4882;Dbxref=GeneID:1099326;Note=PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site;gbkey=misc_feature;gene=SCH24.12c
NC_003888.3	RefSeq	gene	4281711	4282559	.	-	.	ID=gene3920;Dbxref=GeneID:1099327;Name=SCH24.13c;gbkey=Gene;gene=SCH24.13c;gene_biotype=protein_coding;gene_synonym=SCH24.13c;locus_tag=SCO3891
NC_003888.3	RefSeq	CDS	4281711	4282559	.	-	0	ID=cds3845;Parent=gene3920;Dbxref=Genbank:NP_628077.1,GeneID:1099327;Name=NP_628077.1;Note=SCH24.13c%2C possible membrane protein%2C len: 282 aa%3B unknown function%2C previously sequenced as TR:O86857 (EMBL:AJ007313)%2C ORF2. Contains hydrophobic%2C possible membrane-spanning region;gbkey=CDS;gene=SCH24.13c;product=hypothetical protein;protein_id=NP_628077.1;transl_table=11
NC_003888.3	RefSeq	gene	4282577	4283287	.	-	.	ID=gene3921;Dbxref=GeneID:1099328;Name=SCH24.14c;gbkey=Gene;gene=SCH24.14c;gene_biotype=protein_coding;gene_synonym=SCH24.14c,sigT;locus_tag=SCO3892
NC_003888.3	RefSeq	CDS	4282577	4283287	.	-	0	ID=cds3846;Parent=gene3921;Dbxref=Genbank:NP_628078.1,GeneID:1099328;Name=NP_628078.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: in Mycobacterium bovis this protein has been shown to be active at high temperatures and during stationary phase;gbkey=CDS;gene=SCH24.14c;product=RNA polymerase sigma factor SigM;protein_id=NP_628078.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4282970	4283170	.	-	.	ID=id4883;Dbxref=GeneID:1099328;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 57.10%2C E-value 3.8e-13;gbkey=misc_feature;gene=SCH24.14c
NC_003888.3	RefSeq	gene	4283316	4285007	.	-	.	ID=gene3922;Dbxref=GeneID:1099329;Name=SCH24.15c;gbkey=Gene;gene=SCH24.15c;gene_biotype=protein_coding;gene_synonym=SCH24.15c;locus_tag=SCO3893
NC_003888.3	RefSeq	CDS	4283316	4285007	.	-	0	ID=cds3847;Parent=gene3922;Dbxref=Genbank:NP_628079.1,GeneID:1099329;Name=NP_628079.1;Note=SCH24.15c%2C hypothetical protein%2C len: 563 aa%3B unknown function%2C previously partially sequenced as TR:O86855 (EMBL:AJ007313) Streptomyces coelicolor hypothetical protein (281 aa). Weakly similar to TR:Q53839 (EMBL:U19250) Streptomyces coelicolor protein kinase-like protein (565 aa)%2C fasta scores%3B opt: 205 z-score: 204.5 E(): 0.00045%2C 25.1%25 identity in 263 aa overlap and to C-terminal half of TR:O05435 (EMBL:Z94121) Mycobacterium tuberculosis hypothetical protein (1184 aa) (26.9%25 identity in 557 aa overlap);gbkey=CDS;gene=SCH24.15c;product=hypothetical protein;protein_id=NP_628079.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4285014	4285017	.	-	.	ID=id4884;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4285147	4287582	.	-	.	ID=gene3923;Dbxref=GeneID:1099330;Name=SCH24.16c;gbkey=Gene;gene=SCH24.16c;gene_biotype=protein_coding;gene_synonym=SCH24.16c;locus_tag=SCO3894
NC_003888.3	RefSeq	CDS	4285147	4287582	.	-	0	ID=cds3848;Parent=gene3923;Dbxref=Genbank:NP_628080.1,GeneID:1099330;Name=NP_628080.1;Note=SCH24.16c%2C probable transmembrane protein%2C len: 811 aa%3B unknown function%2C similar to hypothetical proteins e.g. the N-terminal half of TR:O05435 (EMBL:Z94121) Mycobacterium tuberculosis hypothetical protein (1184 aa)%2C fasta scores%3B opt: 573 z-score: 440.2 E(): 3.4e-17%2C 31.1%25 identity in 573 aa overlap and TR:Q50198 (EMBL:L39923) Mycobacterium leprae hypothetical protein (379 aa) (31.7%25 identity in 398 aa overlap). Also weakly similar to SW:MVIN_SALTY (EMBL:Z26133) Salmonella typhimurium 'mvin' (524 aa) (26.8%25 identity in 456 aa overlap). The N-terminal third is hydrophilic%2C while the remainder contains hydrophobic%2C probable membrane-spanning regions;gbkey=CDS;gene=SCH24.16c;product=transmembrane protein;protein_id=NP_628080.1;transl_table=11
NC_003888.3	RefSeq	gene	4287627	4289990	.	-	.	ID=gene3924;Dbxref=GeneID:1099331;Name=SCH24.17c;gbkey=Gene;gene=SCH24.17c;gene_biotype=protein_coding;gene_synonym=SCH24.17c;locus_tag=SCO3895
NC_003888.3	RefSeq	CDS	4287627	4289990	.	-	0	ID=cds3849;Parent=gene3924;Dbxref=Genbank:NP_628081.1,GeneID:1099331;Name=NP_628081.1;Note=SCH24.17c%2C membrane protein%2C len: 787 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH24.17c;product=hypothetical protein;protein_id=NP_628081.1;transl_table=11
NC_003888.3	RefSeq	gene	4290216	4291667	.	+	.	ID=gene3925;Dbxref=GeneID:1099332;Name=SCH24.18;gbkey=Gene;gene=SCH24.18;gene_biotype=protein_coding;gene_synonym=SCH24.18;locus_tag=SCO3896
NC_003888.3	RefSeq	CDS	4290216	4291667	.	+	0	ID=cds3850;Parent=gene3925;Dbxref=Genbank:NP_628082.1,GeneID:1099332;Name=NP_628082.1;Note=SCH24.18%2C probable RNA nucleotidyltransferase%2C len: 483 aa%3B similar to tRNA nucleotidyltransferases e.g. SW:CCA_ECOLI (EMBL:M12788)%2C cca%2C Escherichia coli tRNA nucleotidyltransferase (412 aa)%2C fasta scores%3B opt: 413 z-score: 480.7 E(): 1.8e-19%2C 33.8%25 identity in 334 aa overlap. Also similar to mRNA poly(A) polymerases e.g. SW:PCNB_ECOLI (EMBL:S48039)%2C pcnB%2C Escherichia coli poly(A) polymerase (472 aa) (32.0%25 identity in 256 aa overlap). Contains probable coiled-coil from 392 to 425 (34 residues) (Max score: 1.525%2C probability 0.97);gbkey=CDS;gene=SCH24.18;product=RNA nucleotidyltransferase;protein_id=NP_628082.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	4291671	4291704	.	-	.	ID=id4885;Note=hairpin%2C stem is 17/17 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4291764	4292357	.	-	.	ID=gene3926;Dbxref=GeneID:1099333;Name=SCH24.19c;gbkey=Gene;gene=SCH24.19c;gene_biotype=protein_coding;gene_synonym=SCH24.19c;locus_tag=SCO3897
NC_003888.3	RefSeq	CDS	4291764	4292357	.	-	0	ID=cds3851;Parent=gene3926;Dbxref=Genbank:NP_628083.1,GeneID:1099333;Name=NP_628083.1;Note=SCH24.19c%2C hypothetical protein%2C len: 197 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains proline/glutamine-rich region from residues 24-87 approx. and TTA (leucine) codon%2C possible target for bldA regulation%2C near N-terminus;gbkey=CDS;gene=SCH24.19c;product=hypothetical protein;protein_id=NP_628083.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4292340	4292342	.	-	.	ID=id4886;Dbxref=GeneID:1099333;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCH24.19c
NC_003888.3	RefSeq	gene	4292389	4293666	.	-	.	ID=gene3927;Dbxref=GeneID:1099334;Name=SCH24.20c;gbkey=Gene;gene=SCH24.20c;gene_biotype=protein_coding;gene_synonym=SCH24.20c;locus_tag=SCO3898
NC_003888.3	RefSeq	CDS	4292389	4293666	.	-	0	ID=cds3852;Parent=gene3927;Dbxref=Genbank:NP_628084.1,GeneID:1099334;Name=NP_628084.1;Note=SCH24.20c%2C probable membrane protein%2C len: 425 aa%3B unknown function%2C similar to many membrane proteins e.g. SW:YO37_MYCTU (EMBL:Z80233) Mycobacterium tuberculosis hypothetical protein (441 aa)%2C fasta scores%3B opt: 725 z-score: 832.9 E(): 0%2C 36.5%25 identity in 408 aa overlap and to resistance determinants e.g. TR:O3113 (EMBL:AF030344)%2C tetV%2C Mycobacterium smegmatis tetracycline-resistance determinant (419 aa) (24.5%25 identity in 416 aa overlap). Similar to TR:O69824 (EMBL:AL023496) S.coelicolor possible integral membrane protein (630 aa) (27.0%25 identity in 429 aa overlap) and TR:O69821 (EMBL:AL023496) S.coelicolor probable transmembrane protein (431 aa) (23.1%25 identity in 428 aa overlap). Contains several hydrophobic%2C probable membrane-spanning regions;gbkey=CDS;gene=SCH24.20c;product=hypothetical protein;protein_id=NP_628084.1;transl_table=11
NC_003888.3	RefSeq	gene	4293746	4294828	.	-	.	ID=gene3928;Dbxref=GeneID:1099335;Name=SCH24.21c;gbkey=Gene;gene=SCH24.21c;gene_biotype=protein_coding;gene_synonym=SCH24.21c;locus_tag=SCO3899
NC_003888.3	RefSeq	CDS	4293746	4294828	.	-	0	ID=cds3853;Parent=gene3928;Dbxref=Genbank:NP_628085.1,GeneID:1099335;Name=NP_628085.1;Note=SCH24.21c%2C conserved hypothetical protein%2C len: 360 aa%3B unknown function%2C similar to e.g. TR:P71703 (EMBL:Z80775) Mycobacterium tuberculosis hypothetical protein (367 aa)%2C fasta scores%3B opt: 1790 z-score: 2136.2 E(): 0%2C 78.5%25 identity in 353 aa overlap. C-terminal half shows weak similarity with a region of SW:INO1_CANAL (EMBL:L22737)%2C Ino1%2C Candida albicans myo-inositol-1-phosphate synthase (520 aa) (26.3%25 identity in 251 aa overlap) and with TR:O69948 (EMBL:AL023862) S.coelicolor probable hypothetical protein (417 aa) (25.2%25 identity in 226 aa overlap);gbkey=CDS;gene=SCH24.21c;product=hypothetical protein;protein_id=NP_628085.1;transl_table=11
NC_003888.3	RefSeq	gene	4294873	4295550	.	-	.	ID=gene3929;Dbxref=GeneID:1099336;Name=SCH24.22c;gbkey=Gene;gene=SCH24.22c;gene_biotype=protein_coding;gene_synonym=SCH24.22c;locus_tag=SCO3900
NC_003888.3	RefSeq	CDS	4294873	4295550	.	-	0	ID=cds3854;Parent=gene3929;Dbxref=Genbank:NP_628086.1,GeneID:1099336;Name=NP_628086.1;Note=SCH24.22c%2C conserved hypothetical protein%2C len: 225 aa%3B unknown function%2C similar to e.g. TR:P71704 (EMBL:Z80775) Mycobacterium tuberculosis hypothetical protein (180 aa)%2C fasta scores%3B opt: 583 z-score: 671.1 E(): 4.5e-30%2C 51.4%25 identity in 177 aa overlap. Contains probable coiled-coil from 121 to 165 (45 residues) (Max score: 1.819%2C probability 1.00);gbkey=CDS;gene=SCH24.22c;product=hypothetical protein;protein_id=NP_628086.1;transl_table=11
NC_003888.3	RefSeq	gene	4296215	4298602	.	+	.	ID=gene3930;Dbxref=GeneID:1099337;Name=SCH24.23;gbkey=Gene;gene=SCH24.23;gene_biotype=protein_coding;gene_synonym=SCH24.23;locus_tag=SCO3901
NC_003888.3	RefSeq	CDS	4296215	4298602	.	+	0	ID=cds3855;Parent=gene3930;Dbxref=Genbank:NP_628087.1,GeneID:1099337;Name=NP_628087.1;Note=SCH24.23%2C probable  penicillin-binding protein%2C len: 795 aa%3B similar to many e.g. SW:PBPF_BACSU (EMBL:Y14083)%2C PbpF%2C Bacillus subtilis penicillin-binding protein 1A (714 aa)%2C fasta scores%3B opt: 439 z-score: 369.7 E(): 2.8e-13%2C 31.2%25 identity in 683 aa overlap. Contains hydrophobic%2C possible membrane-spanning region at N-terminus. Contains Pfam matches to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 49.60%2C E-value 2.8e-11 and entry PF00912 Transglycosyl%2C Transglycosylase%2C score 172.40%2C E-value 7.3e-48. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCH24.23;product=penicillin-binding protein;protein_id=NP_628087.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4296386	4296895	.	+	.	ID=id4887;Dbxref=GeneID:1099337;Note=Pfam match to entry PF00912 Transglycosyl%2C Transglycosylase%2C score 172.40%2C E-value 7.3e-48;gbkey=misc_feature;gene=SCH24.23
NC_003888.3	RefSeq	sequence_feature	4297193	4298227	.	+	.	ID=id4888;Dbxref=GeneID:1099337;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 49.60%2C E-value 2.8e-11;gbkey=misc_feature;gene=SCH24.23
NC_003888.3	RefSeq	sequence_feature	4298006	4298029	.	+	.	ID=id4889;Dbxref=GeneID:1099337;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCH24.23
NC_003888.3	RefSeq	repeat_region	4298369	4298426	.	+	.	ID=id4890;Dbxref=GeneID:1099337;Note=repeat 2%3B 57 bp imperfect inverted repeat;gbkey=repeat_region;gene=SCH24.23
NC_003888.3	RefSeq	gene	4298723	4300231	.	+	.	ID=gene3931;Dbxref=GeneID:1099338;Name=SH24.24;gbkey=Gene;gene=SH24.24;gene_biotype=protein_coding;gene_synonym=SH24.24;locus_tag=SCO3902
NC_003888.3	RefSeq	CDS	4298723	4300231	.	+	0	ID=cds3856;Parent=gene3931;Dbxref=Genbank:NP_628088.1,GeneID:1099338;Name=NP_628088.1;Note=SH24.24%2C probable integral membrane protein%2C len: 502 aa%3B unknown function%2C similar to transmembrane proteins from Mycobacteria e.g. TR:O53127 (EMBL:AL022118) Mycobacterium leprae  transmembrane protein (564 aa)%2C fasta scores%3B opt: 520 z-score: 575.6 E(): 9.5e-25%2C 38.4%25 identity in 490 aa overlap. Contains several hydrophobic%2C probable membrane-spanning regions;gbkey=CDS;gene=SH24.24;product=hypothetical protein;protein_id=NP_628088.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4298793	4298850	.	+	.	ID=id4891;Dbxref=GeneID:1099338;Note=repeat 2%3B 57 bp imperfect inverted repeat;gbkey=repeat_region;gene=SH24.24
NC_003888.3	RefSeq	gene	4300309	4301340	.	-	.	ID=gene3932;Dbxref=GeneID:1099339;Name=SCH24.25c;gbkey=Gene;gene=SCH24.25c;gene_biotype=protein_coding;gene_synonym=SCH24.25c;locus_tag=SCO3903
NC_003888.3	RefSeq	CDS	4300309	4301340	.	-	0	ID=cds3857;Parent=gene3932;Dbxref=Genbank:NP_628089.1,GeneID:1099339;Name=NP_628089.1;Note=SCH24.25c%2C hypothetical protein%2C len: 343 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SCH24.25c;product=hypothetical protein;protein_id=NP_628089.1;transl_table=11
NC_003888.3	RefSeq	gene	4301402	4302523	.	-	.	ID=gene3933;Dbxref=GeneID:1099340;Name=SCH24.26c;gbkey=Gene;gene=SCH24.26c;gene_biotype=protein_coding;gene_synonym=SCH24.26c;locus_tag=SCO3904
NC_003888.3	RefSeq	CDS	4301402	4302523	.	-	0	ID=cds3858;Parent=gene3933;Dbxref=Genbank:NP_628090.1,GeneID:1099340;Name=NP_628090.1;Note=SCH24.26c%2C conserved hypothetical protein%2C len: 373 aa%3B weakly similar to many e.g. SW:FEMA_STAAU (EMBL:M23918)%2C femA%2C Staphylococcus aureus factor essential for expression of methicillin resistance (433 aa)%2C fasta scores%3B opt: 169 z-score: 200.3 E(): 0.00076%2C 21.7%25 identity in 428 aa overlap;gbkey=CDS;gene=SCH24.26c;product=hypothetical protein;protein_id=NP_628090.1;transl_table=11
NC_003888.3	RefSeq	gene	4302661	4302966	.	-	.	ID=gene3934;Dbxref=GeneID:1099341;Name=SCH24.27c;gbkey=Gene;gene=SCH24.27c;gene_biotype=protein_coding;gene_synonym=SCH24.27c;locus_tag=SCO3905
NC_003888.3	RefSeq	CDS	4302661	4302966	.	-	0	ID=cds3859;Parent=gene3934;Dbxref=Genbank:NP_628091.1,GeneID:1099341;Name=NP_628091.1;Note=SCH24.27c%2C membrane protein%2C len: 101 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH24.27c;product=hypothetical protein;protein_id=NP_628091.1;transl_table=11
NC_003888.3	RefSeq	gene	4303242	4303532	.	+	.	ID=gene3935;Dbxref=GeneID:1099342;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;gene_synonym=SCH24.28;locus_tag=SCO3906
NC_003888.3	RefSeq	CDS	4303242	4303532	.	+	0	ID=cds3860;Parent=gene3935;Dbxref=Genbank:NP_628092.1,GeneID:1099342;Name=NP_628092.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=NP_628092.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4303245	4303520	.	+	.	ID=id4892;Dbxref=GeneID:1099342;Note=Pfam match to entry PF01250 Ribosomal_S6%2C Ribosomal protein S6%2C score 148.40%2C E-value 1.3e-40;gbkey=misc_feature;gene=rpsF
NC_003888.3	RefSeq	sequence_feature	4303371	4303400	.	+	.	ID=id4893;Dbxref=GeneID:1099342;Note=PS01048 Ribosomal protein S6 signature;gbkey=misc_feature;gene=rpsF
NC_003888.3	RefSeq	gene	4303613	4304212	.	+	.	ID=gene3936;Dbxref=GeneID:1099343;Name=SCH24.29;gbkey=Gene;gene=SCH24.29;gene_biotype=protein_coding;gene_synonym=SCH24.29,ssb;locus_tag=SCO3907
NC_003888.3	RefSeq	CDS	4303613	4304212	.	+	0	ID=cds3861;Parent=gene3936;Dbxref=Genbank:NP_628093.1,GeneID:1099343;Name=NP_628093.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;gene=SCH24.29;product=single-stranded DNA-binding protein;protein_id=NP_628093.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4303616	4303954	.	+	.	ID=id4894;Dbxref=GeneID:1099343;Note=Pfam match to entry PF00436 SSB%2C Single-strand binding protein family%2C score 143.30%2C E-value 2.5e-39;gbkey=misc_feature;gene=SCH24.29
NC_003888.3	RefSeq	repeat_region	4303978	4304078	.	+	.	ID=id4895;Dbxref=GeneID:1099343;Note=repeat 1%3B degenerate%2C with internal repeats;gbkey=repeat_region;gene=SCH24.29
NC_003888.3	RefSeq	repeat_region	4304118	4304188	.	+	.	ID=id4896;Dbxref=GeneID:1099343;Note=repeat 1%3B degenerate%2C with internal repeats;gbkey=repeat_region;gene=SCH24.29
NC_003888.3	RefSeq	gene	4304258	4304494	.	+	.	ID=gene3937;Dbxref=GeneID:1099344;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;gene_synonym=SCH24.30;locus_tag=SCO3908
NC_003888.3	RefSeq	CDS	4304258	4304494	.	+	0	ID=cds3862;Parent=gene3937;Dbxref=Genbank:NP_628094.1,GeneID:1099344;Name=NP_628094.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=NP_628094.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4304309	4304470	.	+	.	ID=id4897;Dbxref=GeneID:1099344;Note=Pfam match to entry PF01084 Ribosomal_S18%2C Ribosomal protein S18%2C score 106.60%2C E-value 4.8e-28;gbkey=misc_feature;gene=rpsR
NC_003888.3	RefSeq	sequence_feature	4304327	4304398	.	+	.	ID=id4898;Dbxref=GeneID:1099344;Note=PS00057 Ribosomal protein S18 signature;gbkey=misc_feature;gene=rpsR
NC_003888.3	RefSeq	gene	4304513	4304959	.	+	.	ID=gene3938;Dbxref=GeneID:1099345;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;gene_synonym=SCH24.31;locus_tag=SCO3909
NC_003888.3	RefSeq	CDS	4304513	4304959	.	+	0	ID=cds3863;Parent=gene3938;Dbxref=Genbank:NP_628095.1,GeneID:1099345;Name=NP_628095.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=NP_628095.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4304513	4304956	.	+	.	ID=id4899;Dbxref=GeneID:1099345;Note=Pfam match to entry PF01281 Ribosomal_L9%2C Ribosomal protein L9%2C score 203.80%2C E-value 2.6e-57;gbkey=misc_feature;gene=rplI
NC_003888.3	RefSeq	sequence_feature	4304549	4304632	.	+	.	ID=id4900;Dbxref=GeneID:1099345;Note=PS00651 Ribosomal protein L9 signature;gbkey=misc_feature;gene=rplI
NC_003888.3	RefSeq	gene	4305060	4306406	.	-	.	ID=gene3939;Dbxref=GeneID:1099346;Name=SCH24.32c;gbkey=Gene;gene=SCH24.32c;gene_biotype=protein_coding;gene_synonym=SCH24.32c;locus_tag=SCO3910
NC_003888.3	RefSeq	CDS	4305060	4306406	.	-	0	ID=cds3864;Parent=gene3939;Dbxref=Genbank:NP_628096.1,GeneID:1099346;Name=NP_628096.1;Note=SCH24.32c%2C membrane protein%2C len: 448 aa%3B similar to many e.g. SW:DINF_ECOLI (EMBL:L02362)%2C DinF%2C Escherichia coli DNA-damage-inducible protein (459 aa)%2C fasta scores%3B opt: 571 z-score: 655.4 E(): 3.4e-29%2C 30.0%25 identity in 437 aa overlap. There is an alternative start codon at the third amino acid. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCH24.32c;product=hypothetical protein;protein_id=NP_628096.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4306844	4306849	.	+	.	ID=id4901;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4306857	4308332	.	+	.	ID=gene3940;Dbxref=GeneID:1099347;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;gene_synonym=dnaB,SCH24.33;locus_tag=SCO3911
NC_003888.3	RefSeq	CDS	4306857	4308332	.	+	0	ID=cds3865;Parent=gene3940;Dbxref=Genbank:NP_628097.1,GeneID:1099347;Name=NP_628097.1;Note=SCH24.33%2C dnaB%2C probable replicative DNA helicase%2C len: 491 aa%3B similar to many e.g. SW:DNAB_ECOLI (EMBL:K01174)%2C DnaB%2C Escherichia coli replicative DNA helicase (471 aa)%2C fasta scores%3B opt: 1144 z-score: 1233.0 E(): 0%2C 38.6%25 identity in 461 aa overlap. The position of the  start codon is suggested with reference to GC frame plot and a potential RBS. Contains Pfam match to entry PF00772 DnaB%2C DnaB-like helicase%2C score 558.50%2C E-value 4.4e-164 and PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable helix-turn-helix motif at aa 392-413 (Score 982%2C +2.53 SD);gbkey=CDS;gene=dnaB;product=replicative DNA helicase;protein_id=NP_628097.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4307097	4308137	.	+	.	ID=id4902;Dbxref=GeneID:1099347;Note=Pfam match to entry PF00772 DnaB%2C DnaB-like helicase%2C score 558.50%2C E-value 4.4e-164;gbkey=misc_feature;gene=dnaB
NC_003888.3	RefSeq	sequence_feature	4307622	4307645	.	+	.	ID=id4903;Dbxref=GeneID:1099347;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=dnaB
NC_003888.3	RefSeq	gene	4308427	4309812	.	+	.	ID=gene3941;Dbxref=GeneID:1099348;Name=SCH24.34;gbkey=Gene;gene=SCH24.34;gene_biotype=protein_coding;gene_synonym=SCH24.34;locus_tag=SCO3912
NC_003888.3	RefSeq	CDS	4308427	4309812	.	+	0	ID=cds3866;Parent=gene3941;Dbxref=Genbank:NP_628098.1,GeneID:1099348;Name=NP_628098.1;Note=SCH24.34%2C possible beta-lactamase%2C len: 461 aa%3B similar to many e.g. TR:P71420 (EMBL:X92508) Klebsiella pneumoniae ES-beta-lactamase precursor (382 aa)%2C fasta scores%3B opt: 234 z-score: 262.3 E(): 2.7e-07%2C 25.7%25 identity in 378 aa overlap. Weakly similar to TR:O88012 (EMBL:AL031107) S.coelicolor hypothetical protein SC5A7.06c (409 aa) (29.3%25 identity in 376 aa overlap);gbkey=CDS;gene=SCH24.34;product=beta-lactamase;protein_id=NP_628098.1;transl_table=11
NC_003888.3	RefSeq	gene	4309887	4310339	.	-	.	ID=gene3942;Dbxref=GeneID:1099349;Name=SCH24.35c;gbkey=Gene;gene=SCH24.35c;gene_biotype=protein_coding;gene_synonym=SCH24.35c;locus_tag=SCO3913
NC_003888.3	RefSeq	CDS	4309887	4310339	.	-	0	ID=cds3867;Parent=gene3942;Dbxref=Genbank:NP_628099.1,GeneID:1099349;Name=NP_628099.1;Note=SCH24.35c%2C hypothetical protein%2C len: 150 aa%3B similar to TR:Q54244 (EMBL:D29961) Streptomyces griseus phnO-like regulator for C-P lyase (150 aa)%2C fasta scores%3B opt: 797 z-score: 972.8 E(): 0%2C 79.3%25 identity in 150 aa overlap and to SW:PHNO_ECOLI (EMBL:D90227)%2C phnO%2C in Escherichia coli alkylphosphonate utilization operon (144 aa) (32.2%25 identity in 146 aa overlap). Weakly similar to TR:O86792 (EMBL:AL031317) S.coelicolor probable acetyltransferase (177 aa) (32.7%25 identity in 150 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 80.70%2C E-value 3.1e-20;gbkey=CDS;gene=SCH24.35c;product=hypothetical protein;protein_id=NP_628099.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4309920	4310324	.	-	.	ID=id4904;Dbxref=GeneID:1099349;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 80.70%2C E-value 3.1e-20;gbkey=misc_feature;gene=SCH24.35c
NC_003888.3	RefSeq	gene	4310386	4310850	.	-	.	ID=gene3943;Dbxref=GeneID:1099350;Name=SCH24.36c;gbkey=Gene;gene=SCH24.36c;gene_biotype=protein_coding;gene_synonym=SCH24.36c;locus_tag=SCO3914
NC_003888.3	RefSeq	CDS	4310386	4310850	.	-	0	ID=cds3868;Parent=gene3943;Dbxref=Genbank:NP_628100.1,GeneID:1099350;Name=NP_628100.1;Note=SCH24.36c%2C probable transcriptional regulator%2C len: 154 aa%3B weakly similar to SW:PECS_ERWCH (EMBL:X74409) PecS%2C Erwinia chrysanthemi regulator of pectinase%2C cellulase%2C and blue pigment production (166 aa)%2C fasta scores%3B opt: 136 z-score: 183.2 E(): 0.0068%2C 30.5%25 identity in 95 aa overlap. Also similar to other regulatory proteins. Contains Pfam match to entry PF01047 MarR%2C MarR family%2C score 52.20%2C E-value 1.1e-11;gbkey=CDS;gene=SCH24.36c;product=transcriptional regulator;protein_id=NP_628100.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4310407	4310736	.	-	.	ID=id4905;Dbxref=GeneID:1099350;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 52.20%2C E-value 1.1e-11;gbkey=misc_feature;gene=SCH24.36c
NC_003888.3	RefSeq	gene	4310991	4312205	.	+	.	ID=gene3944;Dbxref=GeneID:1099351;Name=SCH24.37;gbkey=Gene;gene=SCH24.37;gene_biotype=protein_coding;gene_synonym=SCH24.37;locus_tag=SCO3915
NC_003888.3	RefSeq	CDS	4310991	4312205	.	+	0	ID=cds3869;Parent=gene3944;Dbxref=Genbank:NP_628101.1,GeneID:1099351;Name=NP_628101.1;Note=SCH24.37%2C probable transmembrane efflux protein%2C len: 404 aa%3B similar to many e.g. TR:Q56147 (EMBL:U09991)%2C cmlV%2C Streptomyces violaceus chloramphenicol efflux pump (436 aa)%2C fasta scores%3B opt: 1012 z-score: 1048.2 E(): 0%2C 40.5%25 identity in 395 aa overlap. Similar to other efflux proteins from S.coelicolor e.g. SCE94.17c (EMBL:AL049628) possible exporter (531 aa) (26.8%25 identity in 395 aa overlap). Contains several hydrophobic%2C probable membrane-spanning regions. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -61.60%2C E-value 0.00088;gbkey=CDS;gene=SCH24.37;product=transmembrane efflux protein;protein_id=NP_628101.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4310997	4312163	.	+	.	ID=id4906;Dbxref=GeneID:1099351;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -61.60%2C E-value 0.00088;gbkey=misc_feature;gene=SCH24.37
NC_003888.3	RefSeq	gene	4312354	4312773	.	+	.	ID=gene3945;Dbxref=GeneID:1099352;Name=SCH24.38;gbkey=Gene;gene=SCH24.38;gene_biotype=protein_coding;gene_synonym=SCH24.38;locus_tag=SCO3916
NC_003888.3	RefSeq	CDS	4312354	4312773	.	+	0	ID=cds3870;Parent=gene3945;Dbxref=Genbank:NP_628102.1,GeneID:1099352;Name=NP_628102.1;Note=SCH24.38%2C conserved hypothetical protein%2C len: 139 aa%3B similar to many e.g. SW:YDHY_CITFR (EMBL:U09771) Citrobacter freundii hypothetical protein (142 aa)%2C fasta scores%3B opt: 257 z-score: 321.3 E(): 1.4e-10%2C 35.4%25 identity in 130 aa overlap;gbkey=CDS;gene=SCH24.38;product=hypothetical protein;protein_id=NP_628102.1;transl_table=11
NC_003888.3	RefSeq	gene	4312891	4313757	.	-	.	ID=gene3946;Dbxref=GeneID:1099353;Name=SCH24.39c;gbkey=Gene;gene=SCH24.39c;gene_biotype=protein_coding;gene_synonym=SCH24.39c;locus_tag=SCO3917
NC_003888.3	RefSeq	CDS	4312891	4313757	.	-	0	ID=cds3871;Parent=gene3946;Dbxref=Genbank:NP_628103.1,GeneID:1099353;Name=NP_628103.1;Note=SCH24.39c%2C hypothetical protein%2C len: 288 aa%3B unknown function%2C similar to TR:O06743 (EMBL:Y09476)%2C yitH%2C Bacillus subtilis hypothetical protein (282 aa)%2C fasta scores%3B opt: 288 z-score: 349.1 E(): 3.9e-12%2C 26.8%25 identity in 231 aa overlap and TR:P73419 (EMBL:D90906) Synechocystis sp. hypothetical protein (285 aa) (21.9%25 identity in 265 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 17.40%2C E-value 0.02;gbkey=CDS;gene=SCH24.39c;product=hypothetical protein;protein_id=NP_628103.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4313380	4313727	.	-	.	ID=id4907;Dbxref=GeneID:1099353;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 17.40%2C E-value 0.02;gbkey=misc_feature;gene=SCH24.39c
NC_003888.3	RefSeq	gene	4313836	4314318	.	-	.	ID=gene3947;Dbxref=GeneID:1099354;Name=SCH24.40c;gbkey=Gene;gene=SCH24.40c;gene_biotype=protein_coding;gene_synonym=SCH24.40c,SCQ11.01c;locus_tag=SCO3918
NC_003888.3	RefSeq	CDS	4313836	4314318	.	-	0	ID=cds3872;Parent=gene3947;Dbxref=Genbank:NP_733621.1,GeneID:1099354;Name=NP_733621.1;Note=SCQ11.01c%2C hypothetical protein%2C partial CDS%2C len: >95 aa%3B unknown function%2C previously sequenced as TR:Q53870 (EMBL:U37580)%2C S.coelicolor hypothetical protein ORF5 downstream of phosphotyrosine protein phosphatase (159 aa). Weak similarity to the N-terminus of TR:O69888 (EMBL:AL023797) Streptomyces coelicolor hypothetical protein (172 aa)%2C fasta scores%3B opt: 158 z-score: 206.4 E(): 0.00036%2C 46.2%25 identity in 65 aa overlap. Continues as SCH24.40c in cosmid H24 (EMBL:AL049826)~SCH24.40c%2C hypothetical protein%2C partial CDS%2C len: >96 aa%3B unknown function%2C highly similar to TR:Q53870 (EMBL:U37580) S.coelicolor hypothetical protein ORF5 downstream of phosphotyrosine protein phosphatase (159 aa)%2C fasta scores%3B opt: 615 z-score: 859.5 E(): 0%2C 94.8%25 identity in 96 aa overlap;gbkey=CDS;gene=SCH24.40c;product=hypothetical protein;protein_id=NP_733621.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4314030	4318308	.	-	.	ID=id4908;Note=sequence corresponding to EMBL:U37580 from 1 to 4279;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4314389	4315294	.	-	.	ID=gene3948;Dbxref=GeneID:1099355;Name=abaB;gbkey=Gene;gene=abaB;gene_biotype=protein_coding;gene_synonym=abaB,SCQ11.02c;locus_tag=SCO3919
NC_003888.3	RefSeq	CDS	4314389	4315294	.	-	0	ID=cds3873;Parent=gene3948;Dbxref=Genbank:NP_628104.1,GeneID:1099355;Name=NP_628104.1;Note=SCQ11.02c%2C abaB%2C probable lysR-family transcriptional regulator%2C len: 301 aa%3B previously sequenced as TR:Q53869 (EMBL:U37580) S.coelicolor lysR-like protein (301 aa). Highly similar to SW:ARAB_STRAT (EMBL:X91393)%2C AraB%2C Streptomyces antibioticus transcriptional regulatory protein (301 aa)%2C fasta scores%3B opt: 1581 z-score: 1813.2 E(): 0%2C 80.3%25 identity in 300 aa overlap. Similar to many other transcriptional regulators. Contains probable helix-turn-helix motif at aa 17-38 (Score 1659%2C +4.84 SD). Contains Pfam match to PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=CDS;gene=abaB;product=LysR family transcriptional regulator;protein_id=NP_628104.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4314860	4315285	.	-	.	ID=id4909;Dbxref=GeneID:1099355;Note=Match to PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family Score 145.96;gbkey=misc_feature;gene=abaB
NC_003888.3	RefSeq	sequence_feature	4315154	4315246	.	-	.	ID=id4910;Dbxref=GeneID:1099355;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=abaB
NC_003888.3	RefSeq	gene	4315547	4316725	.	-	.	ID=gene3949;Dbxref=GeneID:1099356;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;gene_synonym=cysA,SCQ11.03c;locus_tag=SCO3920
NC_003888.3	RefSeq	CDS	4315547	4316725	.	-	0	ID=cds3874;Parent=gene3949;Dbxref=Genbank:NP_628105.1,GeneID:1099356;Name=NP_628105.1;Note=catalyzes the formation of cysteine and 2-oxobutanoate from cystathionine;gbkey=CDS;gene=cysA;product=cystathionine gamma-lyase;protein_id=NP_628105.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4315562	4316653	.	-	.	ID=id4911;Dbxref=GeneID:1099356;Note=Match to PF01053 Cys_Met_Meta_PP%2C Cys/Met metabolism PLP-dependent enzyme Score 268.52;gbkey=misc_feature;gene=cysA
NC_003888.3	RefSeq	sequence_feature	4316060	4316104	.	-	.	ID=id4912;Dbxref=GeneID:1099356;Note=PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=cysA
NC_003888.3	RefSeq	gene	4316722	4317216	.	-	.	ID=gene3950;Dbxref=GeneID:1099357;Name=ptpA;gbkey=Gene;gene=ptpA;gene_biotype=protein_coding;gene_synonym=ptpA,SCQ11.04c;locus_tag=SCO3921
NC_003888.3	RefSeq	CDS	4316722	4317216	.	-	0	ID=cds3875;Parent=gene3950;Dbxref=Genbank:NP_628106.1,GeneID:1099357;Name=NP_628106.1;Note=SCQ11.04c%2C ptpA%2C low molecular weight protein-tyrosine-phosphatase%2C len: 164 aa%3B previously sequenced as SW:PTPA_STRCO (EMBL:U37580)%2C ptpA%2C S.coelicolor low molecular weight protein-tyrosine-phosphatase (164 aa). Contains Pfam match to PF01451 LMWPc%2C Low molecular weight phosphotyrosine protein phosphatase;gbkey=CDS;gene=ptpA;product=low molecular weight protein-tyrosine-phosphatase;protein_id=NP_628106.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4316755	4317207	.	-	.	ID=id4913;Dbxref=GeneID:1099357;Note=Match to PF01451 LMWPc%2C Low molecular weight phosphotyrosine protein phosphatase Score 237.26;gbkey=misc_feature;gene=ptpA
NC_003888.3	RefSeq	gene	4317222	4317599	.	-	.	ID=gene3951;Dbxref=GeneID:1099358;Name=SCQ11.05c;gbkey=Gene;gene=SCQ11.05c;gene_biotype=protein_coding;gene_synonym=SCQ11.05c;locus_tag=SCO3922
NC_003888.3	RefSeq	CDS	4317222	4317599	.	-	0	ID=cds3876;Parent=gene3951;Dbxref=Genbank:NP_628107.1,GeneID:1099358;Name=NP_628107.1;Note=SCQ11.05c%2C possible membrane protein%2C len: 125 aa%3B previously sequenced as SW:YPT3_STRCO (EMBL:U37580) hypothetical 15.9 kD protein in ptpA 5' region (148 aa)%2C with different start codon. Start codon position is suggested here by GC frameplot analysis. Similar to others from mycobacteria and Bacillus subtilis e.g. TR:O07729 (EMBL:Z97193) Mycobacterium tuberculosis possible membrane protein (134 aa) (42.9%25 identity in 126 aa overlap);gbkey=CDS;gene=SCQ11.05c;product=hypothetical protein;protein_id=NP_628107.1;transl_table=11
NC_003888.3	RefSeq	gene	4317659	4317976	.	+	.	ID=gene3952;Dbxref=GeneID:1099359;Name=SCQ11.06;gbkey=Gene;gene=SCQ11.06;gene_biotype=protein_coding;gene_synonym=SCQ11.06;locus_tag=SCO3923
NC_003888.3	RefSeq	CDS	4317659	4317976	.	+	0	ID=cds3877;Parent=gene3952;Dbxref=Genbank:NP_628108.1,GeneID:1099359;Name=NP_628108.1;Note=SCQ11.06%2C hypothetical protein%2C len: 105 aa%3B previously sequenced as SW:YPT2_STRCO (EMBL:U37580) hypothetical 8.2 kD protein in PtpA 5' region (77 aa)%2C with different start codon. Start codon position is suggested here by GC frameplot analysis. Similar to others e.g. to part of TR:O06336 (EMBL:Z95390) Mycobacterium tuberculosis hypothetical protein (177 aa)%2C fasta scores%3B opt: 145 z-score: 207.2 E(): 0.00033%2C (42.1%25 identity in 57 aa overlap) and to TR:Q59013 (EMBL:U67602) Methanococcus jannaschii hypothetical protein (125 aa) (30.2%25 identity in 63 aa overlap). Weakly similar to SC9B5.02 (EMBL:AL035206) S.coelicolor hypothetical protein (128 aa) (28.9%25 identity in 76 aa overlap);gbkey=CDS;gene=SCQ11.06;product=hypothetical protein;protein_id=NP_628108.1;transl_table=11
NC_003888.3	RefSeq	gene	4318118	4318330	.	+	.	ID=gene3953;Dbxref=GeneID:1099360;Name=SCQ11.07;gbkey=Gene;gene=SCQ11.07;gene_biotype=protein_coding;gene_synonym=SCQ11.07;locus_tag=SCO3924
NC_003888.3	RefSeq	CDS	4318118	4318330	.	+	0	ID=cds3878;Parent=gene3953;Dbxref=Genbank:NP_628109.1,GeneID:1099360;Name=NP_628109.1;Note=SCQ11.07%2C possible membrane protein%2C len: 70 aa%3B previously sequenced as SW:YPT1_STRCO (EMBL:U37580) hypothetical protein in PtpA 5' region (64 aa)%2C with different stop codon. Probable hydrophobic CDS suggested by GC frameplot and positional base preference. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCQ11.07;product=hypothetical protein;protein_id=NP_628109.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4318177	4318199	.	+	.	ID=id4914;Dbxref=GeneID:1099360;Note=22 bp imperfect inverted repeat;gbkey=repeat_region;gene=SCQ11.07
NC_003888.3	RefSeq	gene	4318648	4319373	.	+	.	ID=gene3954;Dbxref=GeneID:1099361;Name=SCQ11.08;gbkey=Gene;gene=SCQ11.08;gene_biotype=protein_coding;gene_synonym=SCQ11.08;locus_tag=SCO3925
NC_003888.3	RefSeq	CDS	4318648	4319373	.	+	0	ID=cds3879;Parent=gene3954;Dbxref=Genbank:NP_628110.1,GeneID:1099361;Name=NP_628110.1;Note=SCQ11.08%2C probable transcriptional regulator%2C len: 241 aa%3B similar to many transcriptional regulators e.g. TR:Q43992 (EMBL:L05770)%2C pobR%2C Acinetobacter calcoaceticus ADP1 transcriptional activator regulating expression of p-hydroxybenzoate hydroxylase (PobA) (271 aa)%2C fasta scores%3B opt: 223 z-score: 262.9 E(): 2.6e-07%2C 25.9%25 identity in 239 aa overlap. Also similar to TR:O88025 (EMBL:AL031107) S.coelicolor probable transcriptional regulator (264 aa) (26.4%25 identity in 239 aa overlap). Contains probable helix-turn-helix motif at aa 19-40 (Score 1331%2C +3.72 SD) and possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCQ11.08;product=transcriptional regulator;protein_id=NP_628110.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4319494	4319498	.	+	.	ID=id4915;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	4319501	4319911	.	+	.	ID=gene3955;Dbxref=GeneID:1099362;Name=SCQ11.09;gbkey=Gene;gene=SCQ11.09;gene_biotype=protein_coding;gene_synonym=SCQ11.09,ssgA;locus_tag=SCO3926
NC_003888.3	RefSeq	CDS	4319501	4319911	.	+	0	ID=cds3880;Parent=gene3955;Dbxref=Genbank:NP_628111.1,GeneID:1099362;Name=NP_628111.1;Note=SCQ11.09%2C ssgA%2C probable regulator%2C len: 136 aa%3B highly similar to TR:P95753 (EMBL:D50051)%2C SsgA%2C Streptomyces griseus protein associated with sporulation and cell division (136 aa)%2C fasta scores%3B opt: 715 z-score: 896.6 E(): 0%2C 77.9%25 identity in 136 aa overlap and similar to others from S.coelicolor e.g. SC5F2A.05c (EMBL:AL049587) possible regulator (138 aa) (35.7%25 identity in 115 aa overlap) and SC5H1.03 (EMBL:AL049863) possible regulator (142 aa) (2.5%25 identity in 114 aa overlap)%2C both annotated by similarity to Streptomyces griseus SsgA. The start codon was selected by similarity to ssgA;gbkey=CDS;gene=SCQ11.09;product=regulator;protein_id=NP_628111.1;transl_table=11
NC_003888.3	RefSeq	gene	4319961	4321502	.	-	.	ID=gene3956;Dbxref=GeneID:1099363;Name=SCQ11.10c;gbkey=Gene;gene=SCQ11.10c;gene_biotype=protein_coding;gene_synonym=SCQ11.10c;locus_tag=SCO3927
NC_003888.3	RefSeq	CDS	4319961	4321502	.	-	0	ID=cds3881;Parent=gene3956;Dbxref=Genbank:NP_628112.1,GeneID:1099363;Name=NP_628112.1;Note=SCQ11.10c%2C possible membrane protein%2C len: 513 aa%3B unknown function%2C probable CDS with Pro/Arg-rich N-terminus and 4x degenerate GGGHGA repeats from aa 58-81. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SCQ11.10c;product=hypothetical protein;protein_id=NP_628112.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4320054	4320076	.	-	.	ID=id4916;Dbxref=GeneID:1099363;Note=22 bp imperfect inverted repeat;gbkey=repeat_region;gene=SCQ11.10c
NC_003888.3	RefSeq	repeat_region	4321260	4321331	.	-	.	ID=id4917;Dbxref=GeneID:1099363;Note=4x degenerate 18 bp direct repeats;gbkey=repeat_region;gene=SCQ11.10c
NC_003888.3	RefSeq	gene	4321756	4323594	.	+	.	ID=gene3957;Dbxref=GeneID:1099364;Name=SCQ11.11;gbkey=Gene;gene=SCQ11.11;gene_biotype=protein_coding;gene_synonym=SCQ11.11,thiC;locus_tag=SCO3928
NC_003888.3	RefSeq	CDS	4321756	4323594	.	+	0	ID=cds3882;Parent=gene3957;Dbxref=Genbank:NP_628113.1,GeneID:1099364;Name=NP_628113.1;Note=required for the synthesis of the hydromethylpyrimidine moiety of thiamine;gbkey=CDS;gene=SCQ11.11;product=thiamine biosynthesis protein ThiC;protein_id=NP_628113.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4323595	4329470	.	+	.	ID=id4918;Note=Possible integrated element%2C approx. position. The C-terminal 49 residues of thiC are duplicated at the other end of the insertion where it continues on cosmid D78 (EMBL:AL034355). The boundary position is suggested by the duplication of the thiC C-terminus and by a change in AT-deviation;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4324301	4324306	.	+	.	ID=id4919;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4324301	4324306	.	-	.	ID=id4920;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4324441	4325793	.	-	.	ID=gene3958;Dbxref=GeneID:1099365;Name=SCQ11.12c;gbkey=Gene;gene=SCQ11.12c;gene_biotype=protein_coding;gene_synonym=SCQ11.12c;locus_tag=SCO3929
NC_003888.3	RefSeq	CDS	4324441	4325793	.	-	0	ID=cds3883;Parent=gene3958;Dbxref=Genbank:NP_628114.1,GeneID:1099365;Name=NP_628114.1;Note=SCQ11.12c%2C hypothetical protein%2C len: 450 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains TTA (leucine) codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCQ11.12c;product=hypothetical protein;protein_id=NP_628114.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4324564	4324566	.	-	.	ID=id4921;Dbxref=GeneID:1099365;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCQ11.12c
NC_003888.3	RefSeq	gene	4325990	4326556	.	+	.	ID=gene3959;Dbxref=GeneID:1099366;Name=SCQ11.13;gbkey=Gene;gene=SCQ11.13;gene_biotype=protein_coding;gene_synonym=SCQ11.13;locus_tag=SCO3930
NC_003888.3	RefSeq	CDS	4325990	4326556	.	+	0	ID=cds3884;Parent=gene3959;Dbxref=Genbank:NP_628115.1,GeneID:1099366;Name=NP_628115.1;Note=SCQ11.13%2C hypothetical protein%2C len: 188 aa%3B weakly similar to TR:Q53897 (EMBL:X60316) AbaA ORFA%2C in S. coelicolor pleiotropic regulatory locus for antibiotic production of actinorhodin (192 aa)%2C fasta scores%3B opt: 146 z-score: 190.3 E(): 0.0029%2C 37.0%25 identity in 154 aa overlap. It is not known whether ORFA is involved in antibiotic production. Also weakly similar to SCE9.30 (EMBL:AL049841) S.coelicolor possible regulator containing TTA (leucine) codon near the N-terminus (154 aa) (31.3%25 identity in 131 aa overlap). Contains TTA (leucine) codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCQ11.13;product=hypothetical protein;protein_id=NP_628115.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4326023	4326025	.	+	.	ID=id4922;Dbxref=GeneID:1099366;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCQ11.13
NC_003888.3	RefSeq	gene	4326866	4327165	.	+	.	ID=gene3960;Dbxref=GeneID:1099367;Name=SCQ11.14;gbkey=Gene;gene=SCQ11.14;gene_biotype=protein_coding;gene_synonym=SCQ11.14;locus_tag=SCO3931
NC_003888.3	RefSeq	CDS	4326866	4327165	.	+	0	ID=cds3885;Parent=gene3960;Dbxref=Genbank:NP_628116.1,GeneID:1099367;Name=NP_628116.1;Note=SCQ11.14%2C hypothetical protein%2C len: 99 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SCQ11.14;product=hypothetical protein;protein_id=NP_628116.1;transl_table=11
NC_003888.3	RefSeq	gene	4327576	4328355	.	-	.	ID=gene3961;Dbxref=GeneID:1099368;Name=SCQ11.15c;gbkey=Gene;gene=SCQ11.15c;gene_biotype=protein_coding;gene_synonym=SCQ11.15c;locus_tag=SCO3932
NC_003888.3	RefSeq	CDS	4327576	4328355	.	-	0	ID=cds3886;Parent=gene3961;Dbxref=Genbank:NP_628117.1,GeneID:1099368;Name=NP_628117.1;Note=SCQ11.15c%2C probable gntR-family transcriptional regulator%2C len: 295 aa%3B similar to many e.g. TR:Q07191 (EMBL:Z19589)%2C KorSA%2C Streptomyces ambofaciens plasmid pSAM2 transcriptional repressor (259 aa)%2C fasta scores%3B opt: 292 z-score: 359.5 E(): 1.1e-12%2C 30.4%25 identity in 253 aa overlap. Also similar to CDS from other integrated plasmids in S.coelicolor e.g. SCE39.09c (EMBL:AL049573)%2C korSA%2C regulatory protein (259 aa) (30.8%25 identity in 253 aa overlap). Part of a integrated plasmid similar to pSAM2. Contains probable helix-turn-helix motif at aa 35-56 (Score 1296%2C +3.60 SD). Contains Pfam match to PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=CDS;gene=SCQ11.15c;product=GntR family transcriptional regulator;protein_id=NP_628117.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4328137	4328316	.	-	.	ID=id4923;Dbxref=GeneID:1099368;Note=Match to PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family Score 96.55;gbkey=misc_feature;gene=SCQ11.15c
NC_003888.3	RefSeq	sequence_feature	4328185	4328259	.	-	.	ID=id4924;Dbxref=GeneID:1099368;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCQ11.15c
NC_003888.3	RefSeq	gene	4328521	4328871	.	+	.	ID=gene3962;Dbxref=GeneID:1099369;Name=SCQ11.16;gbkey=Gene;gene=SCQ11.16;gene_biotype=protein_coding;gene_synonym=SCQ11.16;locus_tag=SCO3933
NC_003888.3	RefSeq	CDS	4328521	4328871	.	+	0	ID=cds3887;Parent=gene3962;Dbxref=Genbank:NP_628118.1,GeneID:1099369;Name=NP_628118.1;Note=SCQ11.16%2C possible regulatory protein%2C len: 116 aa%3B similar to TR:Q53733 (EMBL:Z34987)%2C pra%2C Streptomyces ambofaciens plasmid pSAM2 positive regulator of replicase%2C excisionase%2C and integrase genes (116 aa)%2C fasta scores%3B opt: 161 z-score: 220.6 E(): 5.9e-05%2C 35.0%25 identity in 117 aa overlap. Also similar to CDS from other integrated plasmids in S.coelicolor e.g. SCE39.08c (EMBL:AL049573)%2C Pra%2C regulatory protein (181 aa) (32.5%25 identity in 114 aa overlap). Part of a integrated plasmid similar to pSAM2;gbkey=CDS;gene=SCQ11.16;product=regulatory protein;protein_id=NP_628118.1;transl_table=11
NC_003888.3	RefSeq	gene	4328871	4330172	.	+	.	ID=gene3963;Dbxref=GeneID:1099370;Name=SCD78.01;gbkey=Gene;gene=SCD78.01;gene_biotype=protein_coding;gene_synonym=SCD78.01,SCQ11.17;locus_tag=SCO3934
NC_003888.3	RefSeq	CDS	4328871	4330172	.	+	0	ID=cds3888;Parent=gene3963;Dbxref=Genbank:NP_733622.1,GeneID:1099370;Name=NP_733622.1;Note=SCD78.01%2C ftsK /spoIIIE family protein%2C partial CDS within integrated plasmid%2C len: 271 aa%3B similar to many members of the ftsK /spoIIIE family e.g.SPI_STRAZ (EMBL:S58719) sporulation-regulatory protein from Streptomyces azureus plamsid pSA1.1 (303 aa)%2C fasta scores%3B opt: 736 z-score: 1014.5 E(): 0%2C 49.0%25 identity in 247 aa overlap and TRSA_STRAM (EMBL:Z19593) transfer protein traSA from Streptomyces ambofaciens plasmid pSAM2 (306 aa)%2C fasta scores%3B opt: 222 z-score: 676.5 E(): 2e-30%2C 47.8%25 identity in 203 aa overlap. Also similar to SC6A9.34%2C a protein within another integrated plasmid (on Streptomyces coelicolor cosmid St6A9)(E(): 5.4e-24%2C 45.7%25 identity in 247 aa overlap). Contains PS00017 ATP /GTP-binding site motif A (P-loop)~SCQ11.17%2C ftsK/spoIIIE family protein%2C partial CDS%2C len: >200 aa%3B similar to many e.g. part of SW:TRSA_STRAM (EMBL:Z19593)%2C traSA%2C Streptomyces ambofaciens plasmid pSAM2 transfer protein (415 aa)%2C fasta scores%3B opt: 175 z-score: 218.8 E(): 7.4e-05%2C 34.5%25 identity in 116 aa overlap. Also similar to parts of CDS from other  integrated plasmids in S.coelicolor e.g. SCE39.09c (EMBL:AL049573) korSA%2C regulatory protein (451 aa) (30.8%25 identity in 182 aa overlap) and TR:O86766 (EMBL:AL031035) probable traSA:integrase fusion protein (768 aa) (33.2%25 identity in 187 aa overlap). Contains TTA (leucine) codon%2C possible target for bldA regulation and PS00017 ATP/GTP-binding site motif A (P-loop. This CDS continues into cosmid D78 (EMBL:AL034355) as SCD78.01;gbkey=CDS;gene=SCD78.01;product=ftsK/SpoIIIE family protein;protein_id=NP_733622.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4329321	4329323	.	+	.	ID=id4925;Dbxref=GeneID:1099370;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCD78.01
NC_003888.3	RefSeq	sequence_feature	4329356	4333798	.	+	.	ID=id4926;Note=possible integrated element;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4329356	4329470	.	+	.	ID=id4927;Dbxref=GeneID:1099370;Note=overlap with Streptomyces coelicolor cosmid D78 (EMBL:AL034355) from 1 to 115;gbkey=misc_feature;gene=SCD78.01
NC_003888.3	RefSeq	sequence_feature	4329426	4329449	.	+	.	ID=id4928;Dbxref=GeneID:1099370;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD78.01
NC_003888.3	RefSeq	gene	4330169	4330366	.	+	.	ID=gene3964;Dbxref=GeneID:1099371;Name=SCD78.02;gbkey=Gene;gene=SCD78.02;gene_biotype=protein_coding;gene_synonym=SCD78.02;locus_tag=SCO3935
NC_003888.3	RefSeq	CDS	4330169	4330366	.	+	0	ID=cds3889;Parent=gene3964;Dbxref=Genbank:NP_628119.1,GeneID:1099371;Name=NP_628119.1;Note=SCD78.02%2C small hydrophobic protein%2C len: 65 aa%3B within integrated plasmid. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD78.02;product=hypothetical protein;protein_id=NP_628119.1;transl_table=11
NC_003888.3	RefSeq	gene	4330663	4332021	.	+	.	ID=gene3965;Dbxref=GeneID:1099372;Name=SCD78.03;gbkey=Gene;gene=SCD78.03;gene_biotype=protein_coding;gene_synonym=SCD78.03;locus_tag=SCO3936
NC_003888.3	RefSeq	CDS	4330663	4332021	.	+	0	ID=cds3890;Parent=gene3965;Dbxref=Genbank:NP_628120.1,GeneID:1099372;Name=NP_628120.1;Note=SCD78.03%2C possible plasmid replication initiator protein within integrated plasmid%2C len: 452 aa%3B similar to REPS_STRAM (EMBL:Z19594) replication initiator protein from Streptomyces ambofaciens plasmid pSAM2 (459 aa)%2C fasta scores%3B opt: 712 z-score: 983.7 E(): 0%2C (43.7%25 identity in 467 aa overlap). Note that there is no possible initiation codon upstream of the start of homology (or close downstream). The CDS given here has an arbitrary start;gbkey=CDS;gene=SCD78.03;product=plasmid replication initiator protein;protein_id=NP_628120.1;transl_table=11
NC_003888.3	RefSeq	gene	4332160	4333647	.	-	.	ID=gene3966;Dbxref=GeneID:1099373;Name=SCD78.04c;gbkey=Gene;gene=SCD78.04c;gene_biotype=protein_coding;gene_synonym=SCD78.04c;locus_tag=SCO3937
NC_003888.3	RefSeq	CDS	4332160	4333647	.	-	0	ID=cds3891;Parent=gene3966;Dbxref=Genbank:NP_628121.1,GeneID:1099373;Name=NP_628121.1;Note=SCD78.04c%2C possible integrase/ recombinase within integrated plasmid%2C len: 495 aa%3B similar to TR:Q37839 (EMBL:D38173) ORF469 protein (possible site-specific recombinase) from Actinophage R4 (469 aa)%2C fasta scores%3B opt: 261 z-score: 320.1 E(): 1.4e-10%2C 29.1%25 identity in 306 aa overlap and TR:O06604 (EMBL:Z95586) MTCY336.18 (Rv1586c) possible integrase from M. tuberculosis integrated phage phiRv1 (469 aa)%2C fasta scores%3B opt: 371 z-score: 270.8 E(): 7.8e-08%2C (26.6%25 identity in 489 aa overlap). Probable coiled-coil from 414 to 451 (38 residues) Max score: 1.608 (probability 0.99);gbkey=CDS;gene=SCD78.04c;product=integrase /recombinase;protein_id=NP_628121.1;transl_table=11
NC_003888.3	RefSeq	gene	4333799	4333930	.	+	.	ID=gene3967;Dbxref=GeneID:1099374;Name=SCD78.05;gbkey=Gene;gene=SCD78.05;gene_biotype=protein_coding;gene_synonym=SCD78.05,thiC';locus_tag=SCO3938
NC_003888.3	RefSeq	CDS	4333799	4333930	.	+	0	ID=cds3892;Parent=gene3967;Dbxref=Genbank:NP_628122.1,GeneID:1099374;Name=NP_628122.1;Note=SCD78.05%2C thiC'%2C probable thiamin biosynthesis protein ThiC%2C partial CDS%2C len: 43 aa%3B simlar to the extreme C-terminus of e.g. THIC_ECOLI thiamin biosynthesis protein ThiC (631 aa)%2C fasta scores%3B opt: 97 z-score: 137.7 E(): 2%2C 46.2%25 identity in 39 aa overlap and THIC_MYCTU (547 aa)%2C fasta scores%3B opt: 143 z-score: 272.4 E(): 6.4e-08%2C 53.1%25 identity in 49 aa overlap. Note that this gene appears to have been interrupted by the integration of the upstream element;gbkey=CDS;gene=SCD78.05;partial=true;product=thiamin biosynthesis protein ThiC;protein_id=NP_628122.1;start_range=.,4333799;transl_table=11
NC_003888.3	RefSeq	gene	4334010	4335458	.	+	.	ID=gene3968;Dbxref=GeneID:1099375;Name=SCD78.06;gbkey=Gene;gene=SCD78.06;gene_biotype=protein_coding;gene_synonym=SCD78.06;locus_tag=SCO3939
NC_003888.3	RefSeq	CDS	4334010	4335458	.	+	0	ID=cds3893;Parent=gene3968;Dbxref=Genbank:NP_628123.1,GeneID:1099375;Name=NP_628123.1;Note=SCD78.06%2C unknown%2C len: 482 aa%3B similar to hypothetical proteins in tellurite resistance operon from Serratia marcescens and Alcaligenes sp. e.g. TR:Q52359 EMBL:L38824 terF gene from Serratia marcesens Plasmid R478 (413 aa)%2C fasta scores%3B opt: 377 z-score: 637.8 E(): 2.8e-28%2C 33.4%25 identity in 479 aa overlap. Also simlar in C-terminus to YCBR_BACSU hypothetical 28.0 kd protein in pcp 5'region (243 aa)%2C fasta scores%3B opt: 301 z-score: 372.2 E(): 1.8e-13%2C 36.6%25 identity in 238 aa overlap. Contains Pro-rich region around aa 200;gbkey=CDS;gene=SCD78.06;product=hypothetical protein;protein_id=NP_628123.1;transl_table=11
NC_003888.3	RefSeq	gene	4335483	4336355	.	-	.	ID=gene3969;Dbxref=GeneID:1099376;Name=SCD78.07c;gbkey=Gene;gene=SCD78.07c;gene_biotype=protein_coding;gene_synonym=SCD78.07c;locus_tag=SCO3940
NC_003888.3	RefSeq	CDS	4335483	4336355	.	-	0	ID=cds3894;Parent=gene3969;Dbxref=Genbank:NP_628124.1,GeneID:1099376;Name=NP_628124.1;Note=SCD78.07c%2C possible transmembrane protein%2C len: 301 aa%3B contains two possible membrane spanning regions;gbkey=CDS;gene=SCD78.07c;product=transmembrane protein;protein_id=NP_628124.1;transl_table=11
NC_003888.3	RefSeq	gene	4336537	4337643	.	-	.	ID=gene3970;Dbxref=GeneID:1099377;Name=SCD78.08c;gbkey=Gene;gene=SCD78.08c;gene_biotype=protein_coding;gene_synonym=SCD78.08c;locus_tag=SCO3941
NC_003888.3	RefSeq	CDS	4336537	4337643	.	-	0	ID=cds3895;Parent=gene3970;Dbxref=Genbank:NP_628125.1,GeneID:1099377;Name=NP_628125.1;Note=SCD78.08c%2C probable Ser/Thr protein kinase%2C len: 498 aa%2C identical to TR:G3694948 (EMBL:AF090690) previously sequenced Ser/Thr S. coelicolor. Also similar to TR:O69213 (EMBL:AJ224354) serine-threonine phosphatase PrpA from Anabaena sp. strain PCC 7120 (858 aa) fasta scores%3B opt:102%2C z-score: 234.4%2C E(): 9e-06%2C (26.8%25 identity in 231 aa overlap) contains PS00070 aldehyde dehydrogenases cysteine active site.;gbkey=CDS;gene=SCD78.08c;product=Ser/Thr protein kinase;protein_id=NP_628125.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4337242	4337277	.	-	.	ID=id4929;Dbxref=GeneID:1099377;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SCD78.08c
NC_003888.3	RefSeq	gene	4337841	4338065	.	+	.	ID=gene3971;Dbxref=GeneID:1099378;Name=SCD78.09;gbkey=Gene;gene=SCD78.09;gene_biotype=protein_coding;gene_synonym=SCD78.09;locus_tag=SCO3942
NC_003888.3	RefSeq	CDS	4337841	4338065	.	+	0	ID=cds3896;Parent=gene3971;Dbxref=Genbank:NP_628126.1,GeneID:1099378;Name=NP_628126.1;Note=SCD78.09%2C unknown%2C len: 109 aa;gbkey=CDS;gene=SCD78.09;product=hypothetical protein;protein_id=NP_628126.1;transl_table=11
NC_003888.3	RefSeq	gene	4338034	4339146	.	-	.	ID=gene3972;Dbxref=GeneID:1099379;Name=rstP;gbkey=Gene;gene=rstP;gene_biotype=protein_coding;gene_synonym=rstP,SCD78.10c;locus_tag=SCO3943
NC_003888.3	RefSeq	CDS	4338034	4339146	.	-	0	ID=cds3897;Parent=gene3972;Dbxref=Genbank:NP_628127.1,GeneID:1099379;Name=NP_628127.1;Note=SCD78.10c%2C probable transcriptional regulator%2C len: 370 aa%3B identical to TR:G3644044 (EMBL:AF090833) transcriptional regulator (RstP) from Streptomyces coelicolor. Also similar to members of the lacI family of transcriptional regulators e.g. PURR_ECOLI ((EMBL:J04212)(fasta scores%3B opt: 345%2C z-score: 356.4%2C E(): 1.3e-12%2C 28.2%25 identity in 347 aa overlap) purine nucleotide synthesis repressor from Escherichia coli. Contains PS00356 Bacterial regulatory proteins%2C lacI family signature and Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family%2C score 13.70%2C E-value 2.3e-06;gbkey=CDS;gene=rstP;product=transcriptional regulator;protein_id=NP_628127.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4338184	4338909	.	-	.	ID=id4930;Dbxref=GeneID:1099379;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 13.70%2C E-value 2.3e-06;gbkey=misc_feature;gene=rstP
NC_003888.3	RefSeq	sequence_feature	4339015	4339071	.	-	.	ID=id4931;Dbxref=GeneID:1099379;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=rstP
NC_003888.3	RefSeq	sequence_feature	4339227	4339232	.	+	.	ID=id4932;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4339227	4339232	.	-	.	ID=id4933;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4339565	4340644	.	+	.	ID=gene3973;Dbxref=GeneID:1099380;Name=hisC2;gbkey=Gene;gene=hisC2;gene_biotype=protein_coding;gene_synonym=hisC2,SCD78.11;locus_tag=SCO3944
NC_003888.3	RefSeq	CDS	4339565	4340644	.	+	0	ID=cds3898;Parent=gene3973;Dbxref=Genbank:NP_628128.1,GeneID:1099380;Name=NP_628128.1;Note=SCD78.11%2C hisC2%2C probable histidinol-phophate aminotransferase len: 369 aa%2C similar to eg%2C HIS8_BACSU (EMBL:U83322) histidinol-phophate aminotransferase from Bacillus subtilis (360 aa)%2C fasta scores opt: 633%2C z-score: 785.8%2C E(): 0%2C (34.5%25 identity in 357 aa overlap). Also similar to S. coelicolor hisC%3B HIS8_STRCO (369 aa)%2C fasta scores%3B opt: 567 z-score: 584.5 E(): 2.8e-25%2C 36.5%25 identity in 367 aa overlap. Contains PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. Contains Pfam match to entry PF00222 aminotran_2%2C Aminotransferases class-II%2C score 125.50%2C E-value 9.5e-34;gbkey=CDS;gene=hisC2;product=aminotransferase;protein_id=NP_628128.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4339796	4340572	.	+	.	ID=id4934;Dbxref=GeneID:1099380;Note=Pfam match to entry PF00222 aminotran_2%2C Aminotransferases class-II%2C score 125.50%2C E-value 9.5e-34;gbkey=misc_feature;gene=hisC2
NC_003888.3	RefSeq	sequence_feature	4340222	4340251	.	+	.	ID=id4935;Dbxref=GeneID:1099380;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=hisC2
NC_003888.3	RefSeq	gene	4340932	4342437	.	+	.	ID=gene3974;Dbxref=GeneID:1099381;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;gene_synonym=cydA,SCD78.12;locus_tag=SCO3945
NC_003888.3	RefSeq	CDS	4340932	4342437	.	+	0	ID=cds3899;Parent=gene3974;Dbxref=Genbank:NP_628129.1,GeneID:1099381;Name=NP_628129.1;Note=SCD78.12%2C cydA%2C cytochrome oxidase subunit I len: 501 aa%3B similar to e.g. APPC_ECOLI (EMBL:S63811) cytochrome BD-II oxidase subunit I from Escherichia coli (485 aa)%2C fasta scores opt: 1099 z-score: 1869.0 E():0 (48.6%25 identity in 510 aa overlap) and CYDA_BACSU (EMBL:D83026) cytochrome D ubiquinol oxidase subunit I from Bacillus subtilis (468 aa)%2C fasta scores opt: 1178 z-score: 1729.6(43.9%25 identity in 472 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=cydA;product=cytochrome oxidase subunit I;protein_id=NP_628129.1;transl_table=11
NC_003888.3	RefSeq	gene	4342458	4343462	.	+	.	ID=gene3975;Dbxref=GeneID:1099382;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;gene_synonym=cydB,SCD78.13;locus_tag=SCO3946
NC_003888.3	RefSeq	CDS	4342458	4343462	.	+	0	ID=cds3900;Parent=gene3975;Dbxref=Genbank:NP_628130.1,GeneID:1099382;Name=NP_628130.1;Note=SCD78.13%2C cydB%2C cytochrome oxidase subunit II%2C len: 334 aa%3B similar to CYDB_ECOLI (EMBL:J03939) cytochrome D ubiquinol oxidase subunit II from Escherichia coli (379 aa) fasta scores: opt: 674%2C z-score: 1092.0%2C E():0 (37.3%25 identity in 367 aa overlap) and CYDB_BACSU (EMBL:D83026) cytochrome D ubiquinol oxidase subunit II from Bacillus subtilis (338 aa)%2C fasta scores%3B opt: 1041%2C z-score: 1431.1%2C E():0%2C (47.1%25 identity in 329 aa overlap). Contains possible membrane spanning regions;gbkey=CDS;gene=cydB;product=cytochrome oxidase subunit II;protein_id=NP_628130.1;transl_table=11
NC_003888.3	RefSeq	gene	4343538	4347056	.	+	.	ID=gene3976;Dbxref=GeneID:1099383;Name=cydCD;gbkey=Gene;gene=cydCD;gene_biotype=protein_coding;gene_synonym=cydCD,SCD78.14;locus_tag=SCO3947
NC_003888.3	RefSeq	CDS	4343538	4347056	.	+	0	ID=cds3901;Parent=gene3976;Dbxref=Genbank:NP_628131.1,GeneID:1099383;Name=NP_628131.1;Note=SCD78.14%2C cydCD%2C probable ABC transporter%2C len: 1172 aa%3B N-terminal similarity to CYDD_ECOLI (EMBL:L21749) ABC transporter ATP-binding protein from Escherichia coli (588 aa)%2C fasta scores%3B opt: 736%2C z-score: 950.9%2C E(): 0%2C (39.2%25 identity in525 aa overlap) and CYDC_BACSU (EMBL :D83026) ABC transporter ATP-binding protein from Bacillus subtilis (567 aa)%2C fasta scores%3B opt: 1174%2C z-score:949.4%2C E(): 0 (36.0%25 identity in 566 aa overlap). Also has full length similarity to MDR4_DROME (EMBL:M59076) multidrug resistance protein homolog from Drosophila melanogaster fasta scores%3B opt: 575%2Cz-score: 856.3%2C E():0%2C (27.0%25 identity in 1162 aa overlap). Contains 2 x ATP /GTP-binding motifs (both PS00017)%2C 2 x ABC transporter family signatures (both PS00211). Also contains Pfam match to entry PF00664 ABC transporter transmembrane region and 2 x Pfam matches to entry PF00005 (see misc_features). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=cydCD;product=ABC transporter;protein_id=NP_628131.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4343589	4344422	.	+	.	ID=id4936;Dbxref=GeneID:1099383;Note=Pfam match to entry PF00664 ABC_tran%2C ABC transporter transmembrane region.%2C score 57.10%2C E-value 3.7e-13;gbkey=misc_feature;gene=cydCD
NC_003888.3	RefSeq	sequence_feature	4343994	4344068	.	+	.	ID=id4937;Dbxref=GeneID:1099383;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=cydCD
NC_003888.3	RefSeq	sequence_feature	4344615	4345169	.	+	.	ID=id4938;Dbxref=GeneID:1099383;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 222.70%2C E-value 5.4e-63;gbkey=misc_feature;gene=cydCD
NC_003888.3	RefSeq	sequence_feature	4344636	4344659	.	+	.	ID=id4939;Dbxref=GeneID:1099383;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cydCD
NC_003888.3	RefSeq	sequence_feature	4344948	4344992	.	+	.	ID=id4940;Dbxref=GeneID:1099383;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=cydCD
NC_003888.3	RefSeq	sequence_feature	4346394	4346948	.	+	.	ID=id4941;Dbxref=GeneID:1099383;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 168.80%2C E-value 9.3e-47;gbkey=misc_feature;gene=cydCD
NC_003888.3	RefSeq	sequence_feature	4346415	4346438	.	+	.	ID=id4942;Dbxref=GeneID:1099383;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cydCD
NC_003888.3	RefSeq	sequence_feature	4346727	4346771	.	+	.	ID=id4943;Dbxref=GeneID:1099383;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=cydCD
NC_003888.3	RefSeq	gene	4347161	4348843	.	+	.	ID=gene3977;Dbxref=GeneID:1099384;Name=SCD78.15;gbkey=Gene;gene=SCD78.15;gene_biotype=protein_coding;gene_synonym=SCD78.15;locus_tag=SCO3948
NC_003888.3	RefSeq	CDS	4347161	4348843	.	+	0	ID=cds3902;Parent=gene3977;Dbxref=Genbank:NP_628132.1,GeneID:1099384;Name=NP_628132.1;Note=SCD78.15%2C possible two component sensor%2C len: 560 aa%3B similar to hypothetical proteins from Mycobacterium tuberculosis (TR:O53473 (EMBL:AL021899) membrane protein fasta scores%3B opt: 1257%2C z-score:1182.6%2C E():0%2C (41.7%25 identity in 554 aa overlap) and TR:P95194 (EMBL:Z83867) hypothetical 62.2kD protein%2C fasta scores%3B opt: 1194%2C z-score: 1014.6%2C E(): 0%2C (41.0%25 identity in 558 aa overlap)) and two component sensor protein from Rhodococcus sp.(TR:G3319300 (EMBL:AF064700) fasta scores%3B opt: 968%2C z-score: 881.2%2C E(): 0%2C (36.7%25 identity in 559 aa overlap);gbkey=CDS;gene=SCD78.15;product=two component sensor;protein_id=NP_628132.1;transl_table=11
NC_003888.3	RefSeq	gene	4348966	4350015	.	+	.	ID=gene3978;Dbxref=GeneID:1099385;Name=SCD78.16;gbkey=Gene;gene=SCD78.16;gene_biotype=protein_coding;gene_synonym=SCD78.16;locus_tag=SCO3949
NC_003888.3	RefSeq	CDS	4348966	4350015	.	+	0	ID=cds3903;Parent=gene3978;Dbxref=Genbank:NP_628133.1,GeneID:1099385;Name=NP_628133.1;Note=SCD78.16%2C possible  peptidase%2C len: 349 aa%3B similar to conserved hypotheticals including YEBA_ECOLI Hypothetical 46.7 kDa protein from Escherichia coli (419 aa)%2C fasta scores%3B opt: 279 z-score: 336.7%2C E(): 1.7e-11%2C (28.4%25 identity in 341 aa overlap). Also similar to (TR:O54308 (EMBL:U50357) zoocin A endopeptidase from Streptococcus zooepidemicus fasta scores%3B opt: 276%2C z-score: 307.3%2C E(): 7.7e-10%2C (37.2%25 identity in 148 aa overlap) and LSTP_STAST lysostaphin precursor from Staphylococcus staphylolyticus fasta score%3B opt: 270%2C z-score: 249.6%2C E(): 1.3e-06%2C (42.7%25 identity in 110 aa overlap). Probable N-terminal signal sequence. Probable coiled-coils from 42 to 97 (56 residues) Max score: 1.643 (probability 1.00) and from 125 to 193 (69 residues) Max score: 1.653 (probability 1.00);gbkey=CDS;gene=SCD78.16;product=peptidase;protein_id=NP_628133.1;transl_table=11
NC_003888.3	RefSeq	gene	4350063	4350980	.	-	.	ID=gene3979;Dbxref=GeneID:1099386;Name=SCD78.17c;gbkey=Gene;gene=SCD78.17c;gene_biotype=protein_coding;gene_synonym=SCD78.17c;locus_tag=SCO3950
NC_003888.3	RefSeq	CDS	4350063	4350980	.	-	0	ID=cds3904;Parent=gene3979;Dbxref=Genbank:NP_628134.1,GeneID:1099386;Name=NP_628134.1;Note=SCD78.17c%2C conserved hypothetical protein%2C len: 308 aa%3B similar to e.g. TR:O07810 (EMBL:Z97188) from Mycobacterium tuberculosis fasta scores%3B opt: 503%2C z-score: 626.7%2C E(): 1.2e-27%2C (37.9%25 identity in 277 aa overlap) and YIDA_ECOLI (EMBL:L10328) Escherichia coli fasta scores%3B opt: 297%2C z-score: 407.5%2C E(): 1.9e-15%2C (31.6%25 identity in 282 aa overlap). Also similar to SCD78.27c%2C approx 9kb upstream (37.9%25 identity in 285 aa overlap). Contains Pfam match to entry PF00592 DUF3%2C Domain of Unknown Function 3%2C score 99.00%2C E-value 9.5e-26;gbkey=CDS;gene=SCD78.17c;product=hypothetical protein;protein_id=NP_628134.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4350111	4350878	.	-	.	ID=id4944;Dbxref=GeneID:1099386;Note=Pfam match to entry PF00592 DUF3%2C Domain of Unknown Function 3%2C score 99.00%2C E-value 9.5e-26;gbkey=misc_feature;gene=SCD78.17c
NC_003888.3	RefSeq	gene	4351038	4352000	.	-	.	ID=gene3980;Dbxref=GeneID:1099387;Name=SCD78.18c;gbkey=Gene;gene=SCD78.18c;gene_biotype=protein_coding;gene_synonym=SCD78.18c;locus_tag=SCO3951
NC_003888.3	RefSeq	CDS	4351038	4352000	.	-	0	ID=cds3905;Parent=gene3980;Dbxref=Genbank:NP_628135.1,GeneID:1099387;Name=NP_628135.1;Note=SCD78.18c%2C unknown%2C len: 320 aa%3B similarity to TR:Q54379 (EMBL:X79146) LmbY(295 aa)%2C part of a gene cluster involved in lincomycin biosynthesis /resistance in Streptomyces lincolnensis%2C fasta scores%3B opt: 814%2C z-score: 584.1%2C E(): 2.8e-25%2C (43.8%25 identity in 290 aa overlap). Also similar to TR:Q49598 (EMBL:U31567) F420-dependent N5%2CN10-methylenetetrahydromethanopterin reductase from Methanopyruskandleri fasta scores%3B opt: 191%2C z-score: 333.9%2C E(): 2.5e-11%2C (29.1%25 identity in 247 aa overlap);gbkey=CDS;gene=SCD78.18c;product=hypothetical protein;protein_id=NP_628135.1;transl_table=11
NC_003888.3	RefSeq	gene	4351997	4352455	.	-	.	ID=gene3981;Dbxref=GeneID:1099388;Name=SCD78.19c;gbkey=Gene;gene=SCD78.19c;gene_biotype=protein_coding;gene_synonym=SCD78.19c;locus_tag=SCO3952
NC_003888.3	RefSeq	CDS	4351997	4352455	.	-	0	ID=cds3906;Parent=gene3981;Dbxref=Genbank:NP_628136.1,GeneID:1099388;Name=NP_628136.1;Note=SCD78.19c%2C unknown%2C len: 152 aa;gbkey=CDS;gene=SCD78.19c;product=hypothetical protein;protein_id=NP_628136.1;transl_table=11
NC_003888.3	RefSeq	gene	4352462	4353010	.	-	.	ID=gene3982;Dbxref=GeneID:1099389;Name=SCD78.20c;gbkey=Gene;gene=SCD78.20c;gene_biotype=protein_coding;gene_synonym=SCD78.20c;locus_tag=SCO3953
NC_003888.3	RefSeq	CDS	4352462	4353010	.	-	0	ID=cds3907;Parent=gene3982;Dbxref=Genbank:NP_628137.1,GeneID:1099389;Name=NP_628137.1;Note=in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate%3B functions in tRNA splicing%3B the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown;gbkey=CDS;gene=SCD78.20c;product=RNA 2'-phosphotransferase-like protein;protein_id=NP_628137.1;transl_table=11
NC_003888.3	RefSeq	gene	4353121	4354878	.	-	.	ID=gene3983;Dbxref=GeneID:1099390;Name=SCD78.21c;gbkey=Gene;gene=SCD78.21c;gene_biotype=protein_coding;gene_synonym=SCD78.21c;locus_tag=SCO3954
NC_003888.3	RefSeq	CDS	4353121	4354878	.	-	0	ID=cds3908;Parent=gene3983;Dbxref=Genbank:NP_628138.1,GeneID:1099390;Name=NP_628138.1;Note=SCD78.21c%2C oxidoreductase%2C len: 584 aa%3B N-terminal region similar to Y00P_MYCTU (EMBL:Z70283) oxidoreductase from Mycobacterium tuberculosis (650 aa)%2C fasta scores%3B opt: 1457%2C z-score: 840.1%2C E(): 0%2C 41.0%25 identity in 652 aa overlap. Contains PS00061 short chain dehydrogenases /reductases family signature;gbkey=CDS;gene=SCD78.21c;product=short chain dehydrogenase;protein_id=NP_628138.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4353430	4353516	.	-	.	ID=id4945;Dbxref=GeneID:1099390;Note=PS00061 Short-chain dehydrogenases reductases;gbkey=misc_feature;gene=SCD78.21c
NC_003888.3	RefSeq	gene	4354875	4355894	.	-	.	ID=gene3984;Dbxref=GeneID:1099391;Name=SCD78.22c;gbkey=Gene;gene=SCD78.22c;gene_biotype=protein_coding;gene_synonym=SCD78.22c;locus_tag=SCO3955
NC_003888.3	RefSeq	CDS	4354875	4355894	.	-	0	ID=cds3909;Parent=gene3984;Dbxref=Genbank:NP_628139.1,GeneID:1099391;Name=NP_628139.1;Note=SCD78.22c%2C conserved hypothetical protein%2C len: 339 aa%3B similar to TR:Q9HYS2 (EMBL:AE004754) Pseudomonas aeruginosa hypothetical protein PA3323%2C 291 aa%3B fasta scores: opt: 1052 Z-score: 1194.1 E(): 7e-59%3B 57.143%25 identityin 273 aa overlap. Contains TTA Leu codon: possible target for bldA regulation;gbkey=CDS;gene=SCD78.22c;product=hypothetical protein;protein_id=NP_628139.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4355796	4355798	.	-	.	ID=id4946;Dbxref=GeneID:1099391;Note=TTA Leu codon: possible target for action of bldA;gbkey=misc_feature;gene=SCD78.22c
NC_003888.3	RefSeq	gene	4355990	4356952	.	+	.	ID=gene3985;Dbxref=GeneID:1099392;Name=SCD78.23;gbkey=Gene;gene=SCD78.23;gene_biotype=protein_coding;gene_synonym=SCD78.23;locus_tag=SCO3956
NC_003888.3	RefSeq	CDS	4355990	4356952	.	+	0	ID=cds3910;Parent=gene3985;Dbxref=Genbank:NP_628140.1,GeneID:1099392;Name=NP_628140.1;Note=SCD78.23%2C ABC transporter ATP-binding protein%2C similar to YHCH_BACSU (EMBL:X96983) hypothetical ABC transporter ATP-binding protein from Bacillus subtilis%2C fasta scores%3B opt: 438%2C z-score: 522.7%2C E(): 7.2e-22%2C (33.6%25 identity in 220 aa overlap) and YHIH_ECOLI (EMBL:U00039) ABC transporter ATP-binding protein from Escherichia coli fasta scores%3B opt: 445%2C z-score: 530.5%2C E(): 2.6e-22%2C (30.7%25 identity in 287 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 183.40%2C E-value 3.8e-51 and PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCD78.23;product=ABC transporter ATP-binding protein;protein_id=NP_628140.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4356065	4356613	.	+	.	ID=id4947;Dbxref=GeneID:1099392;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 183.40%2C E-value 3.8e-51;gbkey=misc_feature;gene=SCD78.23
NC_003888.3	RefSeq	sequence_feature	4356086	4356109	.	+	.	ID=id4948;Dbxref=GeneID:1099392;Note=PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCD78.23
NC_003888.3	RefSeq	gene	4356969	4357850	.	+	.	ID=gene3986;Dbxref=GeneID:1099393;Name=SCD78.24;gbkey=Gene;gene=SCD78.24;gene_biotype=protein_coding;gene_synonym=SCD78.24;locus_tag=SCO3957
NC_003888.3	RefSeq	CDS	4356969	4357850	.	+	0	ID=cds3911;Parent=gene3986;Dbxref=Genbank:NP_628141.1,GeneID:1099393;Name=NP_628141.1;Note=SCD78.24%2C possible integral membrane protein%2C len: 293 aa%2C possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SCD78.24;product=hypothetical protein;protein_id=NP_628141.1;transl_table=11
NC_003888.3	RefSeq	gene	4357847	4358758	.	+	.	ID=gene3987;Dbxref=GeneID:1099394;Name=SCD78.25;gbkey=Gene;gene=SCD78.25;gene_biotype=protein_coding;gene_synonym=SCD78.25;locus_tag=SCO3958
NC_003888.3	RefSeq	CDS	4357847	4358758	.	+	0	ID=cds3912;Parent=gene3987;Dbxref=Genbank:NP_628142.1,GeneID:1099394;Name=NP_628142.1;Note=SCD78.25%2C ABC transporter ATP-binding protein%2C len: 303 aa%3B similar to TR:Q45404 (EMBL:U09819) SpaFABC transporter ATP-binding protein (247 aa) from Bacillus subtilis%2C fasta scores%3Bopt: 524%2C z-score: 615.6%2C E(): 4.8e-27%2C (39.3%25 identity in 234 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 161.50%2C E-value 1.4e-44 and Prosite matches to PS00017 ATP /GTP-binding%3D PS00211 ABC transporters family signature;gbkey=CDS;gene=SCD78.25;product=ABC transporter ATP-binding protein;protein_id=NP_628142.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4357928	4358458	.	+	.	ID=id4949;Dbxref=GeneID:1099394;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 161.50%2C E-value 1.4e-44;gbkey=misc_feature;gene=SCD78.25
NC_003888.3	RefSeq	sequence_feature	4357949	4357972	.	+	.	ID=id4950;Dbxref=GeneID:1099394;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD78.25
NC_003888.3	RefSeq	sequence_feature	4358231	4358275	.	+	.	ID=id4951;Dbxref=GeneID:1099394;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCD78.25
NC_003888.3	RefSeq	gene	4358770	4359489	.	+	.	ID=gene3988;Dbxref=GeneID:1099395;Name=SCD78.26;gbkey=Gene;gene=SCD78.26;gene_biotype=protein_coding;gene_synonym=SCD78.26;locus_tag=SCO3959
NC_003888.3	RefSeq	CDS	4358770	4359489	.	+	0	ID=cds3913;Parent=gene3988;Dbxref=Genbank:NP_628143.1,GeneID:1099395;Name=NP_628143.1;Note=SCD78.26%2C possible integral membrane protein%2C len: 239 aa%2C possible membrane spanning regions;gbkey=CDS;gene=SCD78.26;product=hypothetical protein;protein_id=NP_628143.1;transl_table=11
NC_003888.3	RefSeq	gene	4359709	4360551	.	-	.	ID=gene3989;Dbxref=GeneID:1099396;Name=SCD78.27c;gbkey=Gene;gene=SCD78.27c;gene_biotype=protein_coding;gene_synonym=SCD78.27c;locus_tag=SCO3960
NC_003888.3	RefSeq	CDS	4359709	4360551	.	-	0	ID=cds3914;Parent=gene3989;Dbxref=Genbank:NP_628144.1,GeneID:1099396;Name=NP_628144.1;Note=SCD78.27c%2C unknown%2C len: 280 aa%2C similar to family of hypothetical proteins e.g. TR:O07810 (EMBL:Z97188) hypothetical 28.5 kDa protein from Mycobacterium tuberculosis (273 aa)%2C fasta scores%3B opt: 597%2C z-score: 413.5%2C E(): 8.7e-164%2C 3.2%25 identity in 266 aa overlap. Also similar to SCD78.17c approx 9 kb downstream (37.9%25 identity in 285 aa overlap). Contains Pfam match to entry PF00592 DUF3%2C Domain of Unknown Function 3%2C score 96.90%2C E-value 4e-25;gbkey=CDS;gene=SCD78.27c;product=hypothetical protein;protein_id=NP_628144.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4359748	4360488	.	-	.	ID=id4952;Dbxref=GeneID:1099396;Note=Pfam match to entry PF00592 DUF3%2C Domain of Unknown Function 3%2C score 96.90%2C E-value 4e-25;gbkey=misc_feature;gene=SCD78.27c
NC_003888.3	RefSeq	gene	4360548	4361825	.	-	.	ID=gene3990;Dbxref=GeneID:1099397;Name=SCD78.28c;gbkey=Gene;gene=SCD78.28c;gene_biotype=protein_coding;gene_synonym=SCD78.28c,serS;locus_tag=SCO3961
NC_003888.3	RefSeq	CDS	4360548	4361825	.	-	0	ID=cds3915;Parent=gene3990;Dbxref=Genbank:NP_628145.1,GeneID:1099397;Name=NP_628145.1;Note=catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=SCD78.28c;product=seryl-tRNA synthetase;protein_id=NP_628145.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4360581	4361630	.	-	.	ID=id4953;Dbxref=GeneID:1099397;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetases class II (Gly%2C His%2C Pro and Ser)%2C score 205.50%2C E-value 8e-58;gbkey=misc_feature;gene=SCD78.28c
NC_003888.3	RefSeq	sequence_feature	4360974	4361048	.	-	.	ID=id4954;Dbxref=GeneID:1099397;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature;gbkey=misc_feature;gene=SCD78.28c
NC_003888.3	RefSeq	gene	4362335	4363267	.	-	.	ID=gene3991;Dbxref=GeneID:1099398;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;gene_synonym=pheA,SCD78.29c;locus_tag=SCO3962
NC_003888.3	RefSeq	CDS	4362335	4363267	.	-	0	ID=cds3916;Parent=gene3991;Dbxref=Genbank:NP_628146.1,GeneID:1099398;Name=NP_628146.1;Note=SCD78.29c%2C pheA%2C prephenate dehydratase%2C len: 310 aa%2C similar to many eg. PHEA_AMYME (EMBL:L47666) prephenate dehydratase from Amycolatopsis methanolica (304 aa)%2C fasta scores%3B opt: 821%2C z-score: 1164.7%2C E(): 0%2C 46.9%25 identity in 305 aa overlap. Contains PS00857 Prephenate dehydratase signature 1 and Pfam match to entry PF00800 PDT%2C Prephenate dehydratase%2C score 354.80%2C E-value 9.5e-103. Note: Can participate in the biosynthesis of Phenylalanine%2C Tyrosine and Tryptophan;gbkey=CDS;gene=pheA;product=prephenate dehydratase;protein_id=NP_628146.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4362434	4363252	.	-	.	ID=id4955;Dbxref=GeneID:1099398;Note=Pfam match to entry PF00800 PDT%2C Prephenate dehydratase%2C score 354.80%2C E-value 9.5e-103;gbkey=misc_feature;gene=pheA
NC_003888.3	RefSeq	sequence_feature	4362728	4362796	.	-	.	ID=id4956;Dbxref=GeneID:1099398;Note=PS00857 Prephenate dehydratase signature 1;gbkey=misc_feature;gene=pheA
NC_003888.3	RefSeq	gene	4363348	4364685	.	-	.	ID=gene3992;Dbxref=GeneID:1099399;Name=SCD78.30c;gbkey=Gene;gene=SCD78.30c;gene_biotype=protein_coding;gene_synonym=SCD78.30c;locus_tag=SCO3963
NC_003888.3	RefSeq	CDS	4363348	4364685	.	-	0	ID=cds3917;Parent=gene3992;Dbxref=Genbank:NP_628147.1,GeneID:1099399;Name=NP_628147.1;Note=SCD78.30c%2C unknown%2C len: 445 aa%3B similar to YWBN_BACSU (EMBL:X73124) hypothetical protein 45.7kDa protein in epr-galK intergenic region precursor from Bacillus subtilis (416 aa)%2Cfasta scores%3B opt: 302%2C z-score: 556.3%2C E(): 9.7e-24%2C 35.6%25 identity in 432 aa overlap;gbkey=CDS;gene=SCD78.30c;product=hypothetical protein;protein_id=NP_628147.1;transl_table=11
NC_003888.3	RefSeq	gene	4364694	4366736	.	-	.	ID=gene3993;Dbxref=GeneID:1099400;Name=SCBAC25E3.01c;gbkey=Gene;gene=SCBAC25E3.01c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.01c,SCD78.31c;locus_tag=SCO3964
NC_003888.3	RefSeq	CDS	4364694	4366736	.	-	0	ID=cds3918;Parent=gene3993;Dbxref=Genbank:NP_733623.1,GeneID:1099400;Name=NP_733623.1;Note=SCBAC25E3.01c%2C possible integral membrane protein%2C len: >433aa: similar to TR:Q9AK64 (EMBL:AL583944) transport integral membrane protein 2SCD60.19 from Streptomyces coelicolor (589 aa) fasta scores%3B opt: 852%2C Z-score: 887.7%2C 51.646%25 identity (53.968%25 ungapped) in 395 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions.~SCD78.31c%2C unknown%2C partial CDS len: >180 aa%3B contains two hydrophobic domains%2C 6 degenerate repeats of (G /T)KAS and 4 degenerate repeats of TAKGSG;gbkey=CDS;gene=SCBAC25E3.01c;product=hypothetical protein;protein_id=NP_733623.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4365279	4365350	.	-	.	ID=id4957;Dbxref=GeneID:1099400;Note=4x18bp degenerate repeats;gbkey=repeat_region;gene=SCBAC25E3.01c
NC_003888.3	RefSeq	repeat_region	4365384	4365455	.	-	.	ID=id4958;Dbxref=GeneID:1099400;Note=6x16 bp degenerate direct repeat;gbkey=repeat_region;gene=SCBAC25E3.01c
NC_003888.3	RefSeq	gene	4366750	4367286	.	-	.	ID=gene3994;Dbxref=GeneID:1099401;Name=SCBAC25E3.02c;gbkey=Gene;gene=SCBAC25E3.02c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.02c;locus_tag=SCO3965
NC_003888.3	RefSeq	CDS	4366750	4367286	.	-	0	ID=cds3919;Parent=gene3994;Dbxref=Genbank:NP_628148.1,GeneID:1099401;Name=NP_628148.1;Note=SCBAC25E3.02c%2C conserved hypothetical protein%2C len: 178aa: similar to many eg. TR:BAB50242 (EMBL:AP003001) MLL3326 protein from Rhizobium loti (179 aa) fasta scores%3B opt: 241%2C Z-score: 269.7%2C 38.333%25 identity (41.441%25 ungapped) in 120 aa overlap.;gbkey=CDS;gene=SCBAC25E3.02c;product=hypothetical protein;protein_id=NP_628148.1;transl_table=11
NC_003888.3	RefSeq	gene	4367283	4367933	.	-	.	ID=gene3995;Dbxref=GeneID:1099402;Name=SCBAC25E3.03c;gbkey=Gene;gene=SCBAC25E3.03c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.03c;locus_tag=SCO3966
NC_003888.3	RefSeq	CDS	4367283	4367933	.	-	0	ID=cds3920;Parent=gene3995;Dbxref=Genbank:NP_628149.1,GeneID:1099402;Name=NP_628149.1;Note=SCBAC25E3.03c%2C hypothetical protein%2C len: 216 aa: similar to many eg. TR:Q9RWR9 (EMBL:AE001918) conserved hypothetical protein from Deinococcus radiodurans (222 aa) fasta scores%3B opt: 329%2C Z-score: 384.3%2C 33.636%25 identity (37.949%25 ungapped) in 220 aa overlap. Contains Pfam match to entry PF02630 SCO1-SenC%2C SCO1/SenC. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC25E3.03c;product=hypothetical protein;protein_id=NP_628149.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4367391	4367909	.	-	.	ID=id4959;Dbxref=GeneID:1099402;Note=Pfam match to entry PF02630 SCO1-SenC%2C SCO1/SenC%2C score 51.60%2C E-value 1.8e-11;gbkey=misc_feature;gene=SCBAC25E3.03c
NC_003888.3	RefSeq	gene	4368066	4368827	.	-	.	ID=gene3996;Dbxref=GeneID:1099403;Name=SCBAC25E3.04c;gbkey=Gene;gene=SCBAC25E3.04c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.04c;locus_tag=SCO3967
NC_003888.3	RefSeq	CDS	4368066	4368827	.	-	0	ID=cds3921;Parent=gene3996;Dbxref=Genbank:NP_628150.1,GeneID:1099403;Name=NP_628150.1;Note=SCBAC25E3.04c%2C conserved hypothetical membrane protein%2C len: 253aa: similar to many eg. TR:Q9RPV8 (EMBL:AF142677) hypothetical protein from Bacillus megaterium plasmid pBM500 (211 aa) fasta scores%3B opt: 205%2C Z-score: 224.5%2C 28.745%25 identity (34.135%25 ungapped) in 247 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCBAC25E3.04c;product=hypothetical protein;protein_id=NP_628150.1;transl_table=11
NC_003888.3	RefSeq	gene	4368955	4369809	.	-	.	ID=gene3997;Dbxref=GeneID:1099404;Name=SCBAC25E3.05c;gbkey=Gene;gene=SCBAC25E3.05c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.05c;locus_tag=SCO3968
NC_003888.3	RefSeq	CDS	4368955	4369809	.	-	0	ID=cds3922;Parent=gene3997;Dbxref=Genbank:NP_628151.1,GeneID:1099404;Name=NP_628151.1;Note=SCBAC25E3.05c%2C possible integral membrane protein%2C len: 284aa: similar to many from Streptomyces coelicolor eg. TR:Q9RCU (EMBL:AL136149) integral membrane protein SCM2.18c (256 aa) fasta scores%3B opt: 254%2C Z-score: 265.5%2C 37.631%25 identity (47.162%25 ungapped) in 287 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCBAC25E3.05c;product=hypothetical protein;protein_id=NP_628151.1;transl_table=11
NC_003888.3	RefSeq	gene	4370066	4370548	.	-	.	ID=gene3998;Dbxref=GeneID:1099405;Name=SCBAC25E3.06c;gbkey=Gene;gene=SCBAC25E3.06c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.06c;locus_tag=SCO3969
NC_003888.3	RefSeq	CDS	4370066	4370548	.	-	0	ID=cds3923;Parent=gene3998;Dbxref=Genbank:NP_628152.1,GeneID:1099405;Name=NP_628152.1;Note=SCBAC25E3.06%2C possible ATP/GTP-binding protein%2C len: 160 aa: no significant database matches. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCBAC25E3.06c;product=ATP/GTP-binding protein;protein_id=NP_628152.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4370312	4370335	.	-	.	ID=id4960;Dbxref=GeneID:1099405;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC25E3.06c
NC_003888.3	RefSeq	stem_loop	4370535	4370570	.	+	.	ID=id4961;Note=Score 54: 17/17 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4370586	4372061	.	-	.	ID=gene3999;Dbxref=GeneID:1099406;Name=SCBAC25E3.07c;gbkey=Gene;gene=SCBAC25E3.07c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.07c;locus_tag=SCO3970
NC_003888.3	RefSeq	CDS	4370586	4372061	.	-	0	ID=cds3924;Parent=gene3999;Dbxref=Genbank:NP_628153.1,GeneID:1099406;Name=NP_628153.1;Note=SCBAC25E3.07c%2C Xaa-Pro aminopeptidase%2C len: 491aa: identical to SW:Q05813 (AMP1_STRLI) aminopeptidase P I from Streptomyces lividans (490 aa) fasta scores%3B opt: 3229%2C Z-score: 3571.1%2C 100.000%25 identity (100.000%25 ungapped) in 490 aa overlap. Similar to many others eg. SW:Q60394 (AMP2_STRCO) aminopeptidase P II from Streptomyces coelicolor (470 aa) fasta scores%3B opt: 2060%2C Z-score: 2279.7%2C 66.383%25 identity (67.241%25 ungapped) in 470 aa overlap. Contains Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24 and Prosite match to PS00491 Aminopeptidase P and proline dipeptidase signature.;gbkey=CDS;gene=SCBAC25E3.07c;product=Xaa-Pro aminopeptidase;protein_id=NP_628153.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4370625	4371401	.	-	.	ID=id4962;Dbxref=GeneID:1099406;Note=Pfam match to entry PF00557 Peptidase_M24%2C metallopeptidase family M24%2C score 351.00%2C E-value 1.2e-101;gbkey=misc_feature;gene=SCBAC25E3.07c
NC_003888.3	RefSeq	sequence_feature	4370829	4370867	.	-	.	ID=id4963;Dbxref=GeneID:1099406;Note=PS00491 Aminopeptidase P and proline dipeptidase signature;gbkey=misc_feature;gene=SCBAC25E3.07c
NC_003888.3	RefSeq	gene	4372196	4373629	.	-	.	ID=gene4000;Dbxref=GeneID:1099407;Name=SCBAC25E3.08c;gbkey=Gene;gene=SCBAC25E3.08c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.08c;locus_tag=SCO3971
NC_003888.3	RefSeq	CDS	4372196	4373629	.	-	0	ID=cds3925;Parent=gene4000;Dbxref=Genbank:NP_628154.1,GeneID:1099407;Name=NP_628154.1;Note=SCBAC25E3.08c%2C conserved hypothetical protein%2C len: 477 aa: similar to many from Streptomyces coelicolor e.g. TR:Q9RJ90 (EMBL:AL132973) hypothetical protein SCF91.35 (884 aa) fasta scores%3B opt: 458%2C Z-score: 470.1%2C 31.210%25 identity (34.507%25 ungapped) in 471 aa overlap;gbkey=CDS;gene=SCBAC25E3.08c;product=hypothetical protein;protein_id=NP_628154.1;transl_table=11
NC_003888.3	RefSeq	gene	4374285	4374950	.	+	.	ID=gene4001;Dbxref=GeneID:1099408;Name=SCBAC25E3.09;gbkey=Gene;gene=SCBAC25E3.09;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.09;locus_tag=SCO3972
NC_003888.3	RefSeq	CDS	4374285	4374950	.	+	0	ID=cds3926;Parent=gene4001;Dbxref=Genbank:NP_628155.1,GeneID:1099408;Name=NP_628155.1;Note=SCBAC25E3.09%2C conserved hypothetical protein%2C len: 221aa: similar to TR:Q9K3U7 (EMBL:AL359988) conserved hypothetical protein SCD10.30c from Streptomyces coelicolor fasta scores%3B opt: 367%2C Z-score: 407.8%2C 35.354%25 identity (37.037%25 ungapped) in 198 aa overlap.;gbkey=CDS;gene=SCBAC25E3.09;product=hypothetical protein;protein_id=NP_628155.1;transl_table=11
NC_003888.3	RefSeq	gene	4375006	4375671	.	+	.	ID=gene4002;Dbxref=GeneID:1099409;Name=SCBAC25E3.10;gbkey=Gene;gene=SCBAC25E3.10;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.10;locus_tag=SCO3973
NC_003888.3	RefSeq	CDS	4375006	4375671	.	+	0	ID=cds3927;Parent=gene4002;Dbxref=Genbank:NP_628156.1,GeneID:1099409;Name=NP_628156.1;Note=SCBAC25E3.10%2C possible membrane protein%2C len: 221aa: no significant database matches. Contains a possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCBAC25E3.10;product=hypothetical protein;protein_id=NP_628156.1;transl_table=11
NC_003888.3	RefSeq	gene	4375917	4376882	.	-	.	ID=gene4003;Dbxref=GeneID:1099410;Name=SCBAC25E3.11c;gbkey=Gene;gene=SCBAC25E3.11c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.11c;locus_tag=SCO3974
NC_003888.3	RefSeq	CDS	4375917	4376882	.	-	0	ID=cds3928;Parent=gene4003;Dbxref=Genbank:NP_628157.1,GeneID:1099410;Name=NP_628157.1;Note=SCBAC25E3.11c%2C unknown%2C len: 321aa: contains Pfam match to entry PF02810 SEC-C%2C SEC-C motif.;gbkey=CDS;gene=SCBAC25E3.11c;product=hypothetical protein;protein_id=NP_628157.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4376748	4376810	.	-	.	ID=id4964;Dbxref=GeneID:1099410;Note=Pfam match to entry PF02810 SEC-C%2C SEC-C motif%2C score 35.80%2C E-value 9.5e-07;gbkey=misc_feature;gene=SCBAC25E3.11c
NC_003888.3	RefSeq	repeat_region	4377087	4377507	.	+	.	ID=id4965;Note=GC-rich degenerate repeat region;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4377505	4378143	.	-	.	ID=gene4004;Dbxref=GeneID:1099411;Name=SCBAC25E3.12c;gbkey=Gene;gene=SCBAC25E3.12c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.12c;locus_tag=SCO3975
NC_003888.3	RefSeq	CDS	4377505	4378143	.	-	0	ID=cds3929;Parent=gene4004;Dbxref=Genbank:NP_628158.1,GeneID:1099411;Name=NP_628158.1;Note=SCBAC25E3.12c%2C possible regulator%2C len: 212 aa: similar to TR:Q53897 (EMBL:X60316) AbaA regulatory protein from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 225 %2C Z-score: 260.3%2C 33.333%25 identity (36.364%25 ungapped) in 156 aa overlap.;gbkey=CDS;gene=SCBAC25E3.12c;product=regulator;protein_id=NP_628158.1;transl_table=11
NC_003888.3	RefSeq	gene	4378271	4379098	.	-	.	ID=gene4005;Dbxref=GeneID:1099412;Name=SCBAC25E3.13c;gbkey=Gene;gene=SCBAC25E3.13c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.13c;locus_tag=SCO3976
NC_003888.3	RefSeq	CDS	4378271	4379098	.	-	0	ID=cds3930;Parent=gene4005;Dbxref=Genbank:NP_628159.1,GeneID:1099412;Name=NP_628159.1;Note=SCBAC25E3.13c%2C possible phosphodiesterase%2C len: 275aa: similar to many eg. TR:Q9CDC5 (EMBL:AL583917) glycerophosphoryl diester phosphodiesterase from Mycobacterium leprae (271 aa) fasta scores%3B opt: 416%2C Z-score: 496.0%2C 46.269%25 identity (49.012%25 ungapped) in 268 aa overlap and SW:P37965 (GLPQ_BACSU) glycerophosphoryl diester phosphodiesterase from Bacillus subtilis (293 aa) fasta scores%3B opt: 233%2C Z-score: 281.0%2C 33.712%25 identity (36.777%25 ungapped) in 264 aa overlap.;gbkey=CDS;gene=SCBAC25E3.13c;product=phosphodiesterase;protein_id=NP_628159.1;transl_table=11
NC_003888.3	RefSeq	gene	4379364	4380923	.	+	.	ID=gene4006;Dbxref=GeneID:1099413;Name=SCBAC25E3.14;gbkey=Gene;gene=SCBAC25E3.14;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.14;locus_tag=SCO3977
NC_003888.3	RefSeq	CDS	4379364	4380923	.	+	0	ID=cds3931;Parent=gene4006;Dbxref=Genbank:NP_628160.1,GeneID:1099413;Name=NP_628160.1;Note=SCBAC25E3.14%2C possible protease (hypothetical protein)%2C len: 519aa: similar to many eg. TR:Q9FBK9 (EMBL:AL390975)  protease SCP8.12 from Streptomyces coelicolor (542 aa) fasta scores%3B opt: 1265%2C Z-score: 796.4%2C 43.636%25 identity (47.431%25 ungapped) in 550 aa overlap and TR:O06291 (EMBL:Z98260) HtrA from Mycobacterium tuberculosis (549 aa) fasta scores%3B opt: 614%2C Z-score: 396.6%2C 34.870%25 identity (37.826%25 ungapped) in 499 aa overlap. Contains Pfam match to entry PF00089 trypsin%2C Trypsin and Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF). Contains possible N-terminal region signal peptide sequence also possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCBAC25E3.14;product=protease;protein_id=NP_628160.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4379970	4380593	.	+	.	ID=id4966;Dbxref=GeneID:1099413;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 55.30%2C E-value 1.1e-16;gbkey=misc_feature;gene=SCBAC25E3.14
NC_003888.3	RefSeq	sequence_feature	4380603	4380869	.	+	.	ID=id4967;Dbxref=GeneID:1099413;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF).%2C score 16.20%2C E-value 0.029;gbkey=misc_feature;gene=SCBAC25E3.14
NC_003888.3	RefSeq	gene	4381065	4381949	.	-	.	ID=gene4007;Dbxref=GeneID:1099414;Name=SCBAC25E3.15c;gbkey=Gene;gene=SCBAC25E3.15c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.15c;locus_tag=SCO3978
NC_003888.3	RefSeq	CDS	4381065	4381949	.	-	0	ID=cds3932;Parent=gene4007;Dbxref=Genbank:NP_628161.1,GeneID:1099414;Name=NP_628161.1;Note=SCBAC25E3.15c%2C possible oxidoreductase%2C len: 294aa: similar to many eg. TR:Q53929 (EMBL:X62373) ORF 4 from the actinorhodin biosynthetic gene cluster of Streptomyces coelicolor (306 aa) fasta scores%3B opt: 624%2C Z-score: 633.9%2C 40.199%25 identity (41.581%25 ungapped) in 301 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and Prosite match to PS01162 Quinone oxidoreductase / zeta-crystallin signature.;gbkey=CDS;gene=SCBAC25E3.15c;product=oxidoreductase;protein_id=NP_628161.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4381068	4381919	.	-	.	ID=id4968;Dbxref=GeneID:1099414;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 149.90%2C E-value 4.5e-41;gbkey=misc_feature;gene=SCBAC25E3.15c
NC_003888.3	RefSeq	sequence_feature	4381482	4381547	.	-	.	ID=id4969;Dbxref=GeneID:1099414;Note=PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=misc_feature;gene=SCBAC25E3.15c
NC_003888.3	RefSeq	gene	4382030	4382620	.	+	.	ID=gene4008;Dbxref=GeneID:1099415;Name=SCBAC25E3.16;gbkey=Gene;gene=SCBAC25E3.16;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.16;locus_tag=SCO3979
NC_003888.3	RefSeq	CDS	4382030	4382620	.	+	0	ID=cds3933;Parent=gene4008;Dbxref=Genbank:NP_628162.1,GeneID:1099415;Name=NP_628162.1;Note=SCBAC25E3.16%2C possible TetR-family transcriptional regulator%2C len: 196 aa: similar to many from Streptomyces coelicolor e.g. TR:Q9RK21 (EMBL:AL109974) TetR-family transcriptional regulator SCF34.04 (203 aa) fasta scores%3B opt: 497%2C Z-score: 587.5%2C 43.750%25 identity (44.681%25 ungapped) in 192 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=CDS;gene=SCBAC25E3.16;product=TetR family transcriptional regulator;protein_id=NP_628162.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4382087	4382227	.	+	.	ID=id4970;Dbxref=GeneID:1099415;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 61.80%2C E-value 1.5e-14;gbkey=misc_feature;gene=SCBAC25E3.16
NC_003888.3	RefSeq	gene	4382684	4382768	.	+	.	ID=gene4009;Dbxref=GeneID:3240037;Name=SCOt34;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt34
NC_003888.3	RefSeq	tRNA	4382684	4382768	.	+	.	ID=rna47;Parent=gene4009;Dbxref=GeneID:3240037;Note=tRNA Ser anticodon TGA%2C Cove score 60.95;gbkey=tRNA;product=tRNA-Ser
NC_003888.3	RefSeq	exon	4382684	4382768	.	+	.	ID=id4971;Parent=rna47;Dbxref=GeneID:3240037;Note=tRNA Ser anticodon TGA%2C Cove score 60.95;gbkey=tRNA;product=tRNA-Ser
NC_003888.3	RefSeq	gene	4382898	4383473	.	-	.	ID=gene4010;Dbxref=GeneID:1099416;Name=SCBAC25E3.17c;gbkey=Gene;gene=SCBAC25E3.17c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.17c;locus_tag=SCO3980
NC_003888.3	RefSeq	CDS	4382898	4383473	.	-	0	ID=cds3934;Parent=gene4010;Dbxref=Genbank:NP_628163.1,GeneID:1099416;Name=NP_628163.1;Note=SCBAC25E3.17c%2C unknown%2C len: 191 aa: no significant database matches.;gbkey=CDS;gene=SCBAC25E3.17c;product=hypothetical protein;protein_id=NP_628163.1;transl_table=11
NC_003888.3	RefSeq	gene	4383616	4384371	.	-	.	ID=gene4011;Dbxref=GeneID:1099417;Name=SCBAC25E3.18c;gbkey=Gene;gene=SCBAC25E3.18c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.18c;locus_tag=SCO3981
NC_003888.3	RefSeq	CDS	4383616	4384371	.	-	0	ID=cds3935;Parent=gene4011;Dbxref=Genbank:NP_628164.1,GeneID:1099417;Name=NP_628164.1;Note=SCBAC25E3.18c%2C possible GntR-family transcriptional regulator%2C len: 251aa: similar to many eg. TR:Q07191 (EMBL:Z19589) KorSA regulatory protein from Streptomyces ambofaciens plasmid pSAM2 (259 aa) fasta scores%3B opt: 323%2C Z-score: 366.6%2C 30.952%25 identity (32.911%25 ungapped) in 252 aa overlap. Also strongly similar to TR:Q9X8E2 (EMBL:AL049573)  GntR-family regulator SCE39.19 from Streptomyces coelicolor (251 aa) fasta scores%3B opt: 1603%2C Z-score: 1776.4%2C 96.386%25 identity (96.386%25 ungapped) in 249 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family.;gbkey=CDS;gene=SCBAC25E3.18c;product=GntR family transcriptional regulator;protein_id=NP_628164.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4384165	4384344	.	-	.	ID=id4972;Dbxref=GeneID:1099417;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 61.00%2C E-value 2.6e-17;gbkey=misc_feature;gene=SCBAC25E3.18c
NC_003888.3	RefSeq	gene	4384451	4384729	.	+	.	ID=gene4012;Dbxref=GeneID:1099418;Name=SCBAC25E3.19;gbkey=Gene;gene=SCBAC25E3.19;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.19;locus_tag=SCO3982
NC_003888.3	RefSeq	CDS	4384451	4384729	.	+	0	ID=cds3936;Parent=gene4012;Dbxref=Genbank:NP_628165.1,GeneID:1099418;Name=NP_628165.1;Note=SCBAC25E3.19%2C conserved hypothetical protein%2C len: 92 aa: strongly similar to TR:Q9X8E1 (EMBL:AL049573) hypothetical protein SCE39.18c from Streptomyces coelicolor (92 aa) fasta scores%3B opt: 471%2C Z-score: 618.1%2C 81.522%25 identity in 92 aa overlap. Contains TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCBAC25E3.19;product=hypothetical protein;protein_id=NP_628165.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4384493	4384495	.	+	.	ID=id4973;Dbxref=GeneID:1099418;Note=TTA encoded leucine - possible target for bldA regulation.;gbkey=misc_feature;gene=SCBAC25E3.19
NC_003888.3	RefSeq	gene	4384742	4385053	.	+	.	ID=gene4013;Dbxref=GeneID:1099419;Name=SCBAC25E3.20;gbkey=Gene;gene=SCBAC25E3.20;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.20;locus_tag=SCO3983
NC_003888.3	RefSeq	CDS	4384742	4385053	.	+	0	ID=cds3937;Parent=gene4013;Dbxref=Genbank:NP_628166.1,GeneID:1099419;Name=NP_628166.1;Note=SCBAC25E3.20%2C unknown%2C len: 103 aa: no significant database matches. Contains TTA encoded leucine - possible target for bldA regulation.;gbkey=CDS;gene=SCBAC25E3.20;product=hypothetical protein;protein_id=NP_628166.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4384817	4384819	.	+	.	ID=id4974;Dbxref=GeneID:1099419;Note=TTA encoded leucine - possible target for bldA regulation.;gbkey=misc_feature;gene=SCBAC25E3.20
NC_003888.3	RefSeq	gene	4385053	4385256	.	+	.	ID=gene4014;Dbxref=GeneID:1099420;Name=SCBAC25E3.21;gbkey=Gene;gene=SCBAC25E3.21;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.21;locus_tag=SCO3984
NC_003888.3	RefSeq	CDS	4385053	4385256	.	+	0	ID=cds3938;Parent=gene4014;Dbxref=Genbank:NP_628167.1,GeneID:1099420;Name=NP_628167.1;Note=SCBAC25E3.21%2C conserved hypothetical protein%2C len: 67 aa: similar to TR:Q9X8D9 (EMBL:AL049573) hypothetical protein SCE39.16c from Streptomyces coelicolor (67 aa) fasta scores%3B opt: 257%2C Z-score: 349.2%2C 58.182%25 identity (58.182%25 ungapped) in 55 aa overlap.;gbkey=CDS;gene=SCBAC25E3.21;product=hypothetical protein;protein_id=NP_628167.1;transl_table=11
NC_003888.3	RefSeq	gene	4385253	4385477	.	+	.	ID=gene4015;Dbxref=GeneID:1099421;Name=SCBAC25E3.22;gbkey=Gene;gene=SCBAC25E3.22;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.22;locus_tag=SCO3985
NC_003888.3	RefSeq	CDS	4385253	4385477	.	+	0	ID=cds3939;Parent=gene4015;Dbxref=Genbank:NP_628168.1,GeneID:1099421;Name=NP_628168.1;Note=SCBAC25E3.22%2C conserved hypothetical protein%2C len: 74 aa: similar to TR:Q9X8D8 (EMBL:AL049573) hypothetical protein SCE39.15c from Streptomyces coelicolor (74 aa) fasta scores%3B opt: 356%2C Z-score: 489.7%2C 77.465%25 identity (77.465%25 ungapped) in 71 aa overlap.;gbkey=CDS;gene=SCBAC25E3.22;product=hypothetical protein;protein_id=NP_628168.1;transl_table=11
NC_003888.3	RefSeq	gene	4385486	4386217	.	+	.	ID=gene4016;Dbxref=GeneID:1099422;Name=SCBAC25E3.23;gbkey=Gene;gene=SCBAC25E3.23;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.23;locus_tag=SCO3986
NC_003888.3	RefSeq	CDS	4385486	4386217	.	+	0	ID=cds3940;Parent=gene4016;Dbxref=Genbank:NP_628169.1,GeneID:1099422;Name=NP_628169.1;Note=SCBAC25E3.23%2C possible GntR-family transcriptional regulator%2C len: 243 aa: similar to TR:Q9X8D7 (EMBL:AL049573)  GntR-family regulator from Streptomyces coelicolor (243 aa) fasta scores%3B opt: 1025%2C Z-score: 1169.6%2C 67.083%25 identity (67.083%25 ungapped) in 240 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and Prosite match to PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=CDS;gene=SCBAC25E3.23;product=GntR family transcriptional regulator;protein_id=NP_628169.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4385507	4385686	.	+	.	ID=id4975;Dbxref=GeneID:1099422;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 75.80%2C E-value 6.8e-22;gbkey=misc_feature;gene=SCBAC25E3.23
NC_003888.3	RefSeq	sequence_feature	4385564	4385638	.	+	.	ID=id4976;Dbxref=GeneID:1099422;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCBAC25E3.23
NC_003888.3	RefSeq	gene	4386217	4386522	.	+	.	ID=gene4017;Dbxref=GeneID:1099423;Name=SCBAC25E3.24;gbkey=Gene;gene=SCBAC25E3.24;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.24;locus_tag=SCO3987
NC_003888.3	RefSeq	CDS	4386217	4386522	.	+	0	ID=cds3941;Parent=gene4017;Dbxref=Genbank:NP_628170.1,GeneID:1099423;Name=NP_628170.1;Note=SCBAC25E3.22%2C conserved hypothetical protein%2C len: 101 aa: similar to TR:Q9X8D6 (EMBL:AL049573) hypothetical protein SCE39.13c from Streptomyces coelicolor (99 aa) fasta scores%3B opt: 441%2C Z-score: 546.5%2C 67.742%25 identity (67.742%25 ungapped) in 93 aa overlap;gbkey=CDS;gene=SCBAC25E3.24;product=hypothetical protein;protein_id=NP_628170.1;transl_table=11
NC_003888.3	RefSeq	gene	4386552	4386899	.	+	.	ID=gene4018;Dbxref=GeneID:1099424;Name=SCBAC25E3.25;gbkey=Gene;gene=SCBAC25E3.25;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.25;locus_tag=SCO3988
NC_003888.3	RefSeq	CDS	4386552	4386899	.	+	0	ID=cds3942;Parent=gene4018;Dbxref=Genbank:NP_628171.1,GeneID:1099424;Name=NP_628171.1;Note=SCBAC25E3.25%2C unknown%2C len: 115 aa: no significant database matches.;gbkey=CDS;gene=SCBAC25E3.25;product=hypothetical protein;protein_id=NP_628171.1;transl_table=11
NC_003888.3	RefSeq	gene	4387240	4387509	.	+	.	ID=gene4019;Dbxref=GeneID:1099425;Name=SCBAC25E3.26;gbkey=Gene;gene=SCBAC25E3.26;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.26;locus_tag=SCO3989
NC_003888.3	RefSeq	CDS	4387240	4387509	.	+	0	ID=cds3943;Parent=gene4019;Dbxref=Genbank:NP_628172.1,GeneID:1099425;Name=NP_628172.1;Note=SCBAC25E3.26%2C possible ribonuclease inhibitor%2C len: 89 aa: similar to SW:P11540 (BARS_BACAM) barstar (ribonuclease inhibitor) from Bacillus amyloliquefaciens (89 aa) fasta scores%3B opt: 141%2C Z-score: 198.8%2C 30.667%25 identity (30.667%25 ungapped) in 75 aa overlap. Contains Pfam match to entry PF01337 Barstar%2C Barstar (barnase inhibitor).;gbkey=CDS;gene=SCBAC25E3.26;product=ribonuclease inhibitor;protein_id=NP_628172.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4387243	4387506	.	+	.	ID=id4977;Dbxref=GeneID:1099425;Note=Pfam match to entry PF01337 Barstar%2C Barstar (barnase inhibitor)%2C score 11.80%2C E-value 0.0038;gbkey=misc_feature;gene=SCBAC25E3.26
NC_003888.3	RefSeq	gene	4387791	4388060	.	-	.	ID=gene4020;Dbxref=GeneID:1099426;Name=SCBAC25E3.27c;gbkey=Gene;gene=SCBAC25E3.27c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.27c;locus_tag=SCO3990
NC_003888.3	RefSeq	CDS	4387791	4388060	.	-	0	ID=cds3944;Parent=gene4020;Dbxref=Genbank:NP_628173.1,GeneID:1099426;Name=NP_628173.1;Note=SCBAC25E3.27c%2C unknown%2C len: 89 aa: no significant database matches.;gbkey=CDS;gene=SCBAC25E3.27c;product=hypothetical protein;protein_id=NP_628173.1;transl_table=11
NC_003888.3	RefSeq	gene	4388129	4389009	.	-	.	ID=gene4021;Dbxref=GeneID:1099427;Name=SCBAC25E3.28c;gbkey=Gene;gene=SCBAC25E3.28c;gene_biotype=pseudogene;gene_synonym=SCBAC25E3.28c;locus_tag=SCO3991;pseudo=true
NC_003888.3	RefSeq	sequence_feature	4388129	4389009	.	-	.	ID=id4978;Dbxref=GeneID:1099427;Note=SCBAC25E3.28c%2C transposase%2C len: 294 aa: similar to many e.g. TR:O69928 (EMBL:AL023861) IS1648 transposase (fragment) from Streptomyces coelicolor (152 aa) fasta scores%3B opt: 1053%2C Z-score: 1166.0%2C 99.342%25 identity (99.342%25 ungapped) in 152 aa overlap. Contains a frameshift which may disrupt function. Also contains Pfam match to entry PF01511 Transposase_6%2C Transposase.%3Btransposase;gbkey=misc_feature;gene=SCBAC25E3.28c
NC_003888.3	RefSeq	sequence_feature	4388662	4388907	.	-	.	ID=id4979;Dbxref=GeneID:1099427;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 12.30%2C E-value 3.6e-05;gbkey=misc_feature;gene=SCBAC25E3.28c
NC_003888.3	RefSeq	gene	4389254	4389544	.	-	.	ID=gene4022;Dbxref=GeneID:1099428;Name=SCBAC25E3.29c;gbkey=Gene;gene=SCBAC25E3.29c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.29c;locus_tag=SCO3992
NC_003888.3	RefSeq	CDS	4389254	4389544	.	-	0	ID=cds3945;Parent=gene4022;Dbxref=Genbank:NP_628174.1,GeneID:1099428;Name=NP_628174.1;Note=SCBAC25E3.29c%2C unknown%2C doubtful CDS%2C len: 96 aa: no significant database matches.;gbkey=CDS;gene=SCBAC25E3.29c;product=hypothetical protein;protein_id=NP_628174.1;transl_table=11
NC_003888.3	RefSeq	gene	4389593	4389862	.	-	.	ID=gene4023;Dbxref=GeneID:1099429;Name=SCBAC25E3.30c;gbkey=Gene;gene=SCBAC25E3.30c;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.30c;locus_tag=SCO3993
NC_003888.3	RefSeq	CDS	4389593	4389862	.	-	0	ID=cds3946;Parent=gene4023;Dbxref=Genbank:NP_628175.1,GeneID:1099429;Name=NP_628175.1;Note=SCBAC25E3.30c%2C unknown%2C doubtful CDS%2C len: 89 aa: no significant database matches.;gbkey=CDS;gene=SCBAC25E3.30c;product=hypothetical protein;protein_id=NP_628175.1;transl_table=11
NC_003888.3	RefSeq	gene	4389919	4390131	.	+	.	ID=gene4024;Dbxref=GeneID:1099430;Name=SCBAC25E3.31;gbkey=Gene;gene=SCBAC25E3.31;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.31;locus_tag=SCO3994
NC_003888.3	RefSeq	CDS	4389919	4390131	.	+	0	ID=cds3947;Parent=gene4024;Dbxref=Genbank:NP_628176.1,GeneID:1099430;Name=NP_628176.1;Note=SCBAC25E3.31%2C unknown%2C doubtful CDS%2C len: 70aa: no significant database matches.;gbkey=CDS;gene=SCBAC25E3.31;product=hypothetical protein;protein_id=NP_628176.1;transl_table=11
NC_003888.3	RefSeq	gene	4390122	4390649	.	+	.	ID=gene4025;Dbxref=GeneID:1099431;Name=SCBAC25E3.32;gbkey=Gene;gene=SCBAC25E3.32;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.32;locus_tag=SCO3995
NC_003888.3	RefSeq	CDS	4390122	4390649	.	+	0	ID=cds3948;Parent=gene4025;Dbxref=Genbank:NP_628177.1,GeneID:1099431;Name=NP_628177.1;Note=SCBAC25E3.32%2C partial possible replication initiator protein%2C len: 175 aa: similar to C-terminal region of many eg. SW:P36891 (REPS_STRAM) RepSA replication initiator protein from Streptomyces ambofaciens plasmid pSAM2 (459 aa) fasta scores%3B opt: 956%2C Z-score: 1170.4%2C 83.626%25 identity (83.626%25 ungapped) in 171 aa overlap. Gene may have been disrupted by translocation a event.;gbkey=CDS;gene=SCBAC25E3.32;partial=true;product=partial replication initiator protein;protein_id=NP_628177.1;start_range=.,4390122;transl_table=11
NC_003888.3	RefSeq	gene	4390652	4390861	.	+	.	ID=gene4026;Dbxref=GeneID:1099432;Name=SCBAC25E3.33;gbkey=Gene;gene=SCBAC25E3.33;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.33;locus_tag=SCO3996
NC_003888.3	RefSeq	CDS	4390652	4390861	.	+	0	ID=cds3949;Parent=gene4026;Dbxref=Genbank:NP_628178.1,GeneID:1099432;Name=NP_628178.1;Note=SCBAC25E3.33%2C possible excisionase%2C len: 69 aa: similar to many eg. SW:P15482 (VXIS_STRAM) excisionase Xis from Streptomyces ambofaciens plasmid pSAM2 (62 aa) fasta scores%3B opt: 93%2C Z-score: 151.3%2C 34.545%25 identity (34.545%25 ungapped) in 55 aa overlap.;gbkey=CDS;gene=SCBAC25E3.33;product=excisionase;protein_id=NP_628178.1;transl_table=11
NC_003888.3	RefSeq	gene	4390861	4392000	.	+	.	ID=gene4027;Dbxref=GeneID:1099433;Name=SCBAC25E3.34;gbkey=Gene;gene=SCBAC25E3.34;gene_biotype=protein_coding;gene_synonym=SCBAC25E3.34;locus_tag=SCO3997
NC_003888.3	RefSeq	CDS	4390861	4392000	.	+	0	ID=cds3950;Parent=gene4027;Dbxref=Genbank:NP_628179.1,GeneID:1099433;Name=NP_628179.1;Note=SCBAC25E3.34%2C possible integrase%2C len: >380aa: similar to many eg. SW:P22884 (VINT_BPML5) integrase int from Mycobacteriophage L5 (371 aa) fasta scores%3B opt: 448%2C Z-score: 506.7%2C 29.111%25 identity (31.304%25 ungapped) in 371 aa overlap. Contains Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family.;end_range=4392000,.;gbkey=CDS;gene=SCBAC25E3.34;partial=true;product=integrase;protein_id=NP_628179.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4391344	4391928	.	+	.	ID=id4980;Dbxref=GeneID:1099433;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 51.80%2C E-value 1.5e-11;gbkey=misc_feature;gene=SCBAC25E3.34
NC_003888.3	RefSeq	gene	4392274	4393617	.	-	.	ID=gene4028;Dbxref=GeneID:1099434;Name=2SC10A7.02c;gbkey=Gene;gene=2SC10A7.02c;gene_biotype=protein_coding;gene_synonym=2SC10A7.02c;locus_tag=SCO3998
NC_003888.3	RefSeq	CDS	4392274	4393617	.	-	0	ID=cds3951;Parent=gene4028;Dbxref=Genbank:NP_628180.1,GeneID:1099434;Name=NP_628180.1;Note=2SC10A7.02c%2C unknown%2C len: 447 aa. Contains 3x Pfam matches to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat;gbkey=CDS;gene=2SC10A7.02c;product=hypothetical protein;protein_id=NP_628180.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4392337	4392438	.	-	.	ID=id4981;Dbxref=GeneID:1099434;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 4.00%2C E-value 22;gbkey=misc_feature;gene=2SC10A7.02c
NC_003888.3	RefSeq	sequence_feature	4392457	4392570	.	-	.	ID=id4982;Dbxref=GeneID:1099434;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 13.10%2C E-value 0.98;gbkey=misc_feature;gene=2SC10A7.02c
NC_003888.3	RefSeq	sequence_feature	4393177	4393290	.	-	.	ID=id4983;Dbxref=GeneID:1099434;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 5.00%2C E-value 16;gbkey=misc_feature;gene=2SC10A7.02c
NC_003888.3	RefSeq	sequence_feature	4393854	4393909	.	+	.	ID=id4984;Note=Right hand portion of tRNA interrupted by element insertion;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	4393985	4393991	.	+	.	ID=id4985;gbkey=RBS
NC_003888.3	RefSeq	gene	4394003	4395133	.	+	.	ID=gene4029;Dbxref=GeneID:1099435;Name=2SC10A7.03;gbkey=Gene;gene=2SC10A7.03;gene_biotype=protein_coding;gene_synonym=2SC10A7.03;locus_tag=SCO3999
NC_003888.3	RefSeq	CDS	4394003	4395133	.	+	0	ID=cds3952;Parent=gene4029;Dbxref=Genbank:NP_628181.1,GeneID:1099435;Name=NP_628181.1;Note=2SC10A7.03%2C possible lipoprotein%2C len: 376 aa. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC10A7.03;product=lipoprotein;protein_id=NP_628181.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4394081	4394113	.	+	.	ID=id4986;Dbxref=GeneID:1099435;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SC10A7.03
NC_003888.3	RefSeq	sequence_feature	4394486	4394509	.	+	.	ID=id4987;Dbxref=GeneID:1099435;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC10A7.03
NC_003888.3	RefSeq	gene	4395100	4395579	.	-	.	ID=gene4030;Dbxref=GeneID:1099436;Name=2SC10A7.04c;gbkey=Gene;gene=2SC10A7.04c;gene_biotype=protein_coding;gene_synonym=2SC10A7.04c;locus_tag=SCO4000
NC_003888.3	RefSeq	CDS	4395100	4395579	.	-	0	ID=cds3953;Parent=gene4030;Dbxref=Genbank:NP_628182.1,GeneID:1099436;Name=NP_628182.1;Note=2SC10A7.04c%2C unknown%2C len: 159 aa;gbkey=CDS;gene=2SC10A7.04c;product=hypothetical protein;protein_id=NP_628182.1;transl_table=11
NC_003888.3	RefSeq	gene	4395671	4396546	.	-	.	ID=gene4031;Dbxref=GeneID:1099437;Name=2SC10A7.05c;gbkey=Gene;gene=2SC10A7.05c;gene_biotype=protein_coding;gene_synonym=2SC10A7.05c;locus_tag=SCO4001
NC_003888.3	RefSeq	CDS	4395671	4396546	.	-	0	ID=cds3954;Parent=gene4031;Dbxref=Genbank:NP_628183.1,GeneID:1099437;Name=NP_628183.1;Note=2SC10A7.05c%2C unknown%2C len: 291 aa;gbkey=CDS;gene=2SC10A7.05c;product=hypothetical protein;protein_id=NP_628183.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4396901	4396905	.	+	.	ID=id4988;gbkey=RBS
NC_003888.3	RefSeq	gene	4396912	4397238	.	+	.	ID=gene4032;Dbxref=GeneID:1099438;Name=2SC10A7.06;gbkey=Gene;gene=2SC10A7.06;gene_biotype=protein_coding;gene_synonym=2SC10A7.06;locus_tag=SCO4002
NC_003888.3	RefSeq	CDS	4396912	4397238	.	+	0	ID=cds3955;Parent=gene4032;Dbxref=Genbank:NP_628184.1,GeneID:1099438;Name=NP_628184.1;Note=2SC10A7.06%2C possible hypothetical protein%2C len: 108 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC10A7.06;product=hypothetical protein;protein_id=NP_628184.1;transl_table=11
NC_003888.3	RefSeq	gene	4397335	4397688	.	-	.	ID=gene4033;Dbxref=GeneID:1099439;Name=2SC10A7.07c;gbkey=Gene;gene=2SC10A7.07c;gene_biotype=protein_coding;gene_synonym=2SC10A7.07c;locus_tag=SCO4003
NC_003888.3	RefSeq	CDS	4397335	4397688	.	-	0	ID=cds3956;Parent=gene4033;Dbxref=Genbank:NP_628185.1,GeneID:1099439;Name=NP_628185.1;Note=2SC10A7.07c%2C unknown%2C len: 117 aa;gbkey=CDS;gene=2SC10A7.07c;product=hypothetical protein;protein_id=NP_628185.1;transl_table=11
NC_003888.3	RefSeq	gene	4397691	4397855	.	-	.	ID=gene4034;Dbxref=GeneID:1099440;Name=2SC10A7.08c;gbkey=Gene;gene=2SC10A7.08c;gene_biotype=protein_coding;gene_synonym=2SC10A7.08c;locus_tag=SCO4004
NC_003888.3	RefSeq	CDS	4397691	4397855	.	-	0	ID=cds3957;Parent=gene4034;Dbxref=Genbank:NP_628186.1,GeneID:1099440;Name=NP_628186.1;Note=2SC10A7.08c%2C small membrane protein%2C len: 54 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC10A7.08c;product=small membrane protein;protein_id=NP_628186.1;transl_table=11
NC_003888.3	RefSeq	gene	4397899	4398372	.	+	.	ID=gene4035;Dbxref=GeneID:1099441;Name=2SC10A7.09;gbkey=Gene;gene=2SC10A7.09;gene_biotype=protein_coding;gene_synonym=2SC10A7.09;locus_tag=SCO4005
NC_003888.3	RefSeq	CDS	4397899	4398372	.	+	0	ID=cds3958;Parent=gene4035;Dbxref=Genbank:NP_628187.1,GeneID:1099441;Name=NP_628187.1;Note=2SC10A7.09%2C probable RNA polymerase sigma factor%2C len: 157 aa%3B similar to SW:RPOE_STRCO (EMBL:L29636) Streptomyces coelicolor RNA polymerase sigma-E factor SigE%2C 176 aa%3B fasta scores: opt: 451 z-score: 556.7 E(): 1.7e-23%3B 48.7%25 identity in 150 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily) and possible helix-turn-helix motif at residues 120..141 (+3.36 SD);gbkey=CDS;gene=2SC10A7.09;product=RNA polymerase sigma factor;protein_id=NP_628187.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4397926	4398093	.	+	.	ID=id4989;Dbxref=GeneID:1099441;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 11.60%2C E-value 0.0055;gbkey=misc_feature;gene=2SC10A7.09
NC_003888.3	RefSeq	gene	4398501	4400177	.	+	.	ID=gene4036;Dbxref=GeneID:1099442;Name=2SC10A7.10;gbkey=Gene;gene=2SC10A7.10;gene_biotype=protein_coding;gene_synonym=2SC10A7.10;locus_tag=SCO4006
NC_003888.3	RefSeq	CDS	4398501	4400177	.	+	0	ID=cds3959;Parent=gene4036;Dbxref=Genbank:NP_628188.1,GeneID:1099442;Name=NP_628188.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;gene=2SC10A7.10;product=long-chain-fatty-acid--CoA ligase;protein_id=NP_628188.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4398642	4399931	.	+	.	ID=id4990;Dbxref=GeneID:1099442;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 90.40%2C E-value 3.7e-23;gbkey=misc_feature;gene=2SC10A7.10
NC_003888.3	RefSeq	sequence_feature	4399071	4399106	.	+	.	ID=id4991;Dbxref=GeneID:1099442;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=2SC10A7.10
NC_003888.3	RefSeq	gene	4400250	4401542	.	-	.	ID=gene4037;Dbxref=GeneID:1099443;Name=2SC10A7.11c;gbkey=Gene;gene=2SC10A7.11c;gene_biotype=protein_coding;gene_synonym=2SC10A7.11c;locus_tag=SCO4007
NC_003888.3	RefSeq	CDS	4400250	4401542	.	-	0	ID=cds3960;Parent=gene4037;Dbxref=Genbank:NP_628189.1,GeneID:1099443;Name=NP_628189.1;Note=2SC10A7.11c%2C possible integral membrane protein%2C len: 430 aa%3B similar to TR:P96675 (EMBL:AB001488) Bacillus subtilis YdeR protein%2C 395 aa%3B fasta scores: opt: 611 z-score: 612.1 E(): 1.4e-26%3B 31.4%25 identity in 373 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC10A7.11c;product=hypothetical protein;protein_id=NP_628189.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4401387	4401391	.	+	.	ID=id4992;gbkey=RBS
NC_003888.3	RefSeq	gene	4401679	4402257	.	+	.	ID=gene4038;Dbxref=GeneID:1099444;Name=2SC10A7.12;gbkey=Gene;gene=2SC10A7.12;gene_biotype=protein_coding;gene_synonym=2SC10A7.12;locus_tag=SCO4008
NC_003888.3	RefSeq	CDS	4401679	4402257	.	+	0	ID=cds3961;Parent=gene4038;Dbxref=Genbank:NP_628190.1,GeneID:1099444;Name=NP_628190.1;Note=2SC10A7.12%2C probable tetR family regulatory protein%2C len: 192 aa%3B similar to TR:CAB93030 (EMBL:AL357432) Streptomyces coelicolor transcriptional regulator SCD95A.03c%2C 199 aa%3B fasta scores: opt: 345 z-score: 436.9 E(): 7.9e-17%3B 35.8%25 identity in 187 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=2SC10A7.12;product=tetR family regulatory protein;protein_id=NP_628190.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4401715	4401855	.	+	.	ID=id4993;Dbxref=GeneID:1099444;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 43.90%2C E-value 1e-09;gbkey=misc_feature;gene=2SC10A7.12
NC_003888.3	RefSeq	gene	4402297	4406688	.	-	.	ID=gene4039;Dbxref=GeneID:1099445;Name=2SC10A7.13c;gbkey=Gene;gene=2SC10A7.13c;gene_biotype=protein_coding;gene_synonym=2SC10A7.13c;locus_tag=SCO4009
NC_003888.3	RefSeq	CDS	4402297	4406688	.	-	0	ID=cds3962;Parent=gene4039;Dbxref=Genbank:NP_628191.1,GeneID:1099445;Name=NP_628191.1;Note=2SC10A7.13c%2C possible bifunctional protein (histidine kinase and regulator)%2C len: 1463 aa%3B N-terminal region similar to TR:Q9RRR7 (EMBL:AE002072) Deinococcus radiodurans sensory box sensor histidine kinase DR2419%2C 744 aa%3B blastp scores: Score%3D 273 (96.1 bits)%2C Expect%3D 3.4e-19%2C Sum P(2)%3D 3.4e-19%3B Identities%3D 112/386 (29%25)%2C Positives%3D 170/386 (44%25) and C-terminal region similar to TR:Q9RKR9 (EMBL:AL133220) Streptomyces coelicolor multi-domain regulatory protein SCC75A.05c%2C 1334 aa%3B blastp scores: Score%3D 229 (80.6 bits)%2C Expect%3D 6.8e-14%2C Sum P(3)%3D 6.8e-14%3B Identitie %3D 100/311 (32%25)%2C Positives%3D 119/311 (38%25). Contains 2x Pfam matches to entry PF00989 PAS%2C PAS domain%2C Pfam match to entry PF00512 signal%2C Histidine kinase and to entry PF00072 response_reg%2C Response regulator receiver domain. Also contains a 5x degenerated repeat GQ and a 10x degenerated repeat: Q(G/A) and a possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC10A7.13c;product=bifunctional histidine kinase and regulator;protein_id=NP_628191.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4402330	4402680	.	-	.	ID=id4994;Dbxref=GeneID:1099445;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 10.80%2C E-value 0.00054;gbkey=misc_feature;gene=2SC10A7.13c
NC_003888.3	RefSeq	sequence_feature	4403575	4403673	.	-	.	ID=id4995;Dbxref=GeneID:1099445;Note=proline and alanine amino acid residues rich region;gbkey=misc_feature;gene=2SC10A7.13c
NC_003888.3	RefSeq	repeat_region	4403875	4403934	.	-	.	ID=id4996;Dbxref=GeneID:1099445;Note=10x degenerated repeat translated in 2SC10A7.13c;gbkey=repeat_region;gene=2SC10A7.13c
NC_003888.3	RefSeq	repeat_region	4404670	4404699	.	-	.	ID=id4997;Dbxref=GeneID:1099445;Note=5x degenerated repeat translated in 2SC10A7.13c;gbkey=repeat_region;gene=2SC10A7.13c
NC_003888.3	RefSeq	sequence_feature	4405039	4405635	.	-	.	ID=id4998;Dbxref=GeneID:1099445;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score -34.80%2C E-value 0.0037;gbkey=misc_feature;gene=2SC10A7.13c
NC_003888.3	RefSeq	sequence_feature	4406101	4406250	.	-	.	ID=id4999;Dbxref=GeneID:1099445;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 34.90%2C E-value 4.7e-08;gbkey=misc_feature;gene=2SC10A7.13c
NC_003888.3	RefSeq	sequence_feature	4406506	4406661	.	-	.	ID=id5000;Dbxref=GeneID:1099445;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 22.60%2C E-value 0.00012;gbkey=misc_feature;gene=2SC10A7.13c
NC_003888.3	RefSeq	ribosome_entry_site	4406699	4406706	.	-	.	ID=id5001;gbkey=RBS
NC_003888.3	RefSeq	gene	4406863	4407330	.	-	.	ID=gene4040;Dbxref=GeneID:1099446;Name=2SC10A7.14c;gbkey=Gene;gene=2SC10A7.14c;gene_biotype=protein_coding;gene_synonym=2SC10A7.14c;locus_tag=SCO4010
NC_003888.3	RefSeq	CDS	4406863	4407330	.	-	0	ID=cds3963;Parent=gene4040;Dbxref=Genbank:NP_628192.1,GeneID:1099446;Name=NP_628192.1;Note=2SC10A7.14c%2C possible hypothetical protein%2C len: 155 aa%3B similar to C-terminal region of SW:SSI1_STRCI (PIR:PC1265) Streptomyces cacaoi subtilisin inhibitor-like protein-1 (Sil-1)%2C 110 aa%3B fasta scores: opt: 179 z-score: 206.6 E(): 0.00053%3B 36.1%25 identity in 97 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC10A7.14c;product=hypothetical protein;protein_id=NP_628192.1;transl_table=11
NC_003888.3	RefSeq	gene	4407512	4407602	.	+	.	ID=gene4041;Dbxref=GeneID:3240038;Name=SCOt35;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt35
NC_003888.3	RefSeq	tRNA	4407512	4407602	.	+	.	ID=rna48;Parent=gene4041;Dbxref=GeneID:3240038;Note=tRNA Ser anticodon GCT%2C Cove score 61.85;gbkey=tRNA;product=tRNA-Ser
NC_003888.3	RefSeq	exon	4407512	4407602	.	+	.	ID=id5002;Parent=rna48;Dbxref=GeneID:3240038;Note=tRNA Ser anticodon GCT%2C Cove score 61.85;gbkey=tRNA;product=tRNA-Ser
NC_003888.3	RefSeq	gene	4407794	4407866	.	+	.	ID=gene4042;Dbxref=GeneID:3240039;Name=SCOt36;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt36
NC_003888.3	RefSeq	tRNA	4407794	4407866	.	+	.	ID=rna49;Parent=gene4042;Dbxref=GeneID:3240039;Note=tRNA Arg anticodon ACG%2C Cove score 72.28;gbkey=tRNA;product=tRNA-Arg
NC_003888.3	RefSeq	exon	4407794	4407866	.	+	.	ID=id5003;Parent=rna49;Dbxref=GeneID:3240039;Note=tRNA Arg anticodon ACG%2C Cove score 72.28;gbkey=tRNA;product=tRNA-Arg
NC_003888.3	RefSeq	gene	4407941	4408414	.	+	.	ID=gene4043;Dbxref=GeneID:1099447;Name=2SC10A7.15;gbkey=Gene;gene=2SC10A7.15;gene_biotype=protein_coding;gene_synonym=2SC10A7.15;locus_tag=SCO4011
NC_003888.3	RefSeq	CDS	4407941	4408414	.	+	0	ID=cds3964;Parent=gene4043;Dbxref=Genbank:NP_628193.1,GeneID:1099447;Name=NP_628193.1;Note=2SC10A7.15%2C possible integral membrane protein%2C len: 157 aa%3B identical to TR:Q04915 (EMBL:X70689) Streptomyces lividans ORF904 protein%2C 157 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC10A7.15;product=hypothetical protein;protein_id=NP_628193.1;transl_table=11
NC_003888.3	RefSeq	gene	4408407	4408838	.	-	.	ID=gene4044;Dbxref=GeneID:1099448;Name=2SC10A7.16c;gbkey=Gene;gene=2SC10A7.16c;gene_biotype=protein_coding;gene_synonym=2SC10A7.16c;locus_tag=SCO4012
NC_003888.3	RefSeq	CDS	4408407	4408838	.	-	0	ID=cds3965;Parent=gene4044;Dbxref=Genbank:NP_628194.1,GeneID:1099448;Name=NP_628194.1;Note=2SC10A7.16c%2C possible integral membrane protein%2C len: 143 aa%3B almost identical to TR:Q04914 (EMBL:X70689) Streptomyces lividans ORFC310 protein%2C 143 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC10A7.16c;product=hypothetical protein;protein_id=NP_628194.1;transl_table=11
NC_003888.3	RefSeq	gene	4409067	4410554	.	+	.	ID=gene4045;Dbxref=GeneID:1099449;Name=2SC10A7.17;gbkey=Gene;gene=2SC10A7.17;gene_biotype=protein_coding;gene_synonym=2SC10A7.17;locus_tag=SCO4013
NC_003888.3	RefSeq	CDS	4409067	4410554	.	+	0	ID=cds3966;Parent=gene4045;Dbxref=Genbank:NP_628195.1,GeneID:1099449;Name=NP_628195.1;Note=2SC10A7.17%2C probable  penicillin-binding protein%2C len: 495 aa%3B similar to TR:Q9XA17 (EMBL:AL079308) Streptomyces coelicolor  penicillin-binding protein SCH69.17%2C 490 aa%3B fasta scores: opt: 1733 z-score: 1829.7 E(): 0%3B 55.0%25 identity in 498 aa overlap and to TR:AAF61246 (EMBL:AF241575) Streptomyces griseus PbpA%2C 485 aa%3B fasta scores: opt: 1186 z-score: 1253.7 E(): 0%3B 55.8%25 identity in 495 aa overlap. Contains Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC10A7.17;product=penicillin-binding protein;protein_id=NP_628195.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4409487	4410539	.	+	.	ID=id5004;Dbxref=GeneID:1099449;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 226.00%2C E-value 5.3e-64;gbkey=misc_feature;gene=2SC10A7.17
NC_003888.3	RefSeq	sequence_feature	4410324	4410347	.	+	.	ID=id5005;Dbxref=GeneID:1099449;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC10A7.17
NC_003888.3	RefSeq	gene	4410577	4410936	.	-	.	ID=gene4046;Dbxref=GeneID:1099450;Name=2SC10A7.18c;gbkey=Gene;gene=2SC10A7.18c;gene_biotype=protein_coding;gene_synonym=2SC10A7.18c;locus_tag=SCO4014
NC_003888.3	RefSeq	CDS	4410577	4410936	.	-	0	ID=cds3967;Parent=gene4046;Dbxref=Genbank:NP_628196.1,GeneID:1099450;Name=NP_628196.1;Note=2SC10A7.18c%2C conserved hypothetical protein%2C len: 119 aa%3B similar to SW:YTFH_ECOLI (EMBL:U14003) Escherichia coli hypothetical 14.1 kDa protein in RplI-CpdB intergenic region YtfH%2C 126 aa%3B fasta scores: opt 376 z-score: 479.2 E(): 3.5e-19%3B 56.1%25 identity in 98 aa overlap. Contains Pfam match to entry PF01638 DUF24%2C Protein of unknown function DUF24;gbkey=CDS;gene=2SC10A7.18c;product=hypothetical protein;protein_id=NP_628196.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4410613	4410885	.	-	.	ID=id5006;Dbxref=GeneID:1099450;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function DUF24%2C score 117.50%2C E-value 2.5e-31;gbkey=misc_feature;gene=2SC10A7.18c
NC_003888.3	RefSeq	gene	4410971	4411894	.	+	.	ID=gene4047;Dbxref=GeneID:1099451;Name=2SC10A7.19;gbkey=Gene;gene=2SC10A7.19;gene_biotype=protein_coding;gene_synonym=2SC10A7.19;locus_tag=SCO4015
NC_003888.3	RefSeq	CDS	4410971	4411894	.	+	0	ID=cds3968;Parent=gene4047;Dbxref=Genbank:NP_628197.1,GeneID:1099451;Name=NP_628197.1;Note=2SC10A7.19%2C unknown%2C len: 307 aa. Contains a TTA leucine codon. Possible target for bldA regulation;gbkey=CDS;gene=2SC10A7.19;product=hypothetical protein;protein_id=NP_628197.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4410998	4411000	.	+	.	ID=id5007;Dbxref=GeneID:1099451;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SC10A7.19
NC_003888.3	RefSeq	gene	4412004	4412957	.	+	.	ID=gene4048;Dbxref=GeneID:1099452;Name=2SC10A7.20;gbkey=Gene;gene=2SC10A7.20;gene_biotype=protein_coding;gene_synonym=2SC10A7.20;locus_tag=SCO4016
NC_003888.3	RefSeq	CDS	4412004	4412957	.	+	0	ID=cds3969;Parent=gene4048;Dbxref=Genbank:NP_628198.1,GeneID:1099452;Name=NP_628198.1;Note=2SC10A7.20%2C hypothetical protein%2C len: 317 aa%3B low similarity to TR:Q9XDF3 (EMBL:AF074603) Streptomyces griseus NonC protein%2C 317 aa%3B fasta scores: opt: 202 z-score: 235.7 E(): 1.3e-05%3B 26.9%25 identity in 238 aa overlap;gbkey=CDS;gene=2SC10A7.20;product=hypothetical protein;protein_id=NP_628198.1;transl_table=11
NC_003888.3	RefSeq	gene	4413017	4413733	.	-	.	ID=gene4049;Dbxref=GeneID:1099453;Name=2SC10A7.21c;gbkey=Gene;gene=2SC10A7.21c;gene_biotype=protein_coding;gene_synonym=2SC10A7.21c,desR2;locus_tag=SCO4017
NC_003888.3	RefSeq	CDS	4413017	4413733	.	-	0	ID=cds3970;Parent=gene4049;Dbxref=Genbank:NP_628199.1,GeneID:1099453;Name=NP_628199.1;Note=2SC10A7.21c%2C desR2%2C iron dependent repressor%2C len: 238 aa%3B highly similar to TR:CAB95905 (EMBL:AL359988) Streptomyces coelicolor iron repressor DesR%2C 230 aa%3B fasta scores: opt: 1140 z-score: 1122.3 E(): 0%3B 76.3%25 identity in 236 aa overlap and to SW:IDER_MYCTU (EMBL:U14191) Mycobacterium tuberculosis iron-dependent repressor IdeR%2C 230 aa%3B fasta scores: opt: 761 z-score: 754.0 E(): 0%3B 61.6%25 identity in 237 aa overlap. Contains Pfam match to entry PF01325 Fe_dep_repress%2C Iron dependent repressor;gbkey=CDS;gene=2SC10A7.21c;product=iron dependent repressor;protein_id=NP_628199.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4413335	4413721	.	-	.	ID=id5008;Dbxref=GeneID:1099453;Note=Pfam match to entry PF01325 Fe_dep_repress%2C Iron dependent repressor%2C score 226.90%2C E-value 3e-64;gbkey=misc_feature;gene=2SC10A7.21c
NC_003888.3	RefSeq	gene	4413742	4414275	.	-	.	ID=gene4050;Dbxref=GeneID:1099454;Name=2SC10A7.22c;gbkey=Gene;gene=2SC10A7.22c;gene_biotype=protein_coding;gene_synonym=2SC10A7.22c;locus_tag=SCO4018
NC_003888.3	RefSeq	CDS	4413742	4414275	.	-	0	ID=cds3971;Parent=gene4050;Dbxref=Genbank:NP_628200.1,GeneID:1099454;Name=NP_628200.1;Note=2SC10A7.22c%2C conserved hypothetical protein%2C len: 177 aa%3B highly similar to SW:YL40_MYCTU (EMBL:Z95388) Mycobacterium tuberculosis hypothetical 18.6 kDa protein MTCY270.28%2C 176 aa%3B fasta scores: opt: 672 z-score: 724.7 E(): 7.4e-33%3B 57.7%25 identity in 175 aa overlap. Contains Pfam match to entry PF01161 PBP%2C Phosphatidylethanolamine-binding protein;gbkey=CDS;gene=2SC10A7.22c;product=hypothetical protein;protein_id=NP_628200.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4413775	4414275	.	-	.	ID=id5009;Dbxref=GeneID:1099454;Note=Pfam match to entry PF01161 PBP%2C Phosphatidylethanolamine-binding protein%2C score -62.90%2C E-value 0.44;gbkey=misc_feature;gene=2SC10A7.22c
NC_003888.3	RefSeq	ribosome_entry_site	4414284	4414290	.	-	.	ID=id5010;gbkey=RBS
NC_003888.3	RefSeq	gene	4414377	4415069	.	+	.	ID=gene4051;Dbxref=GeneID:1099455;Name=2SC10A7.23;gbkey=Gene;gene=2SC10A7.23;gene_biotype=protein_coding;gene_synonym=2SC10A7.23;locus_tag=SCO4019
NC_003888.3	RefSeq	CDS	4414377	4415069	.	+	0	ID=cds3972;Parent=gene4051;Dbxref=Genbank:NP_628201.1,GeneID:1099455;Name=NP_628201.1;Note=2SC10A7.23%2C probable gntR family regulatory protein%2C len: 230 aa%3B similar to SW:YBPA_BURCE (EMBL:M86348) Burkholderia cepacia hypothetical transcriptional regulator in BphA 5' region%2C 245 aa%3B fasta scores: opt: 381 z-score: 442.5 E(): 3.8e-17%3B 36.0%25 identity in 211 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=2SC10A7.23;product=gntR family regulatory protein;protein_id=NP_628201.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4414446	4414622	.	+	.	ID=id5011;Dbxref=GeneID:1099455;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 28.20%2C E-value 3.8e-07;gbkey=misc_feature;gene=2SC10A7.23
NC_003888.3	RefSeq	gene	4415129	4415944	.	+	.	ID=gene4052;Dbxref=GeneID:1099456;Name=2SC10A7.24;gbkey=Gene;gene=2SC10A7.24;gene_biotype=protein_coding;gene_synonym=2SC10A7.24;locus_tag=SCO4020
NC_003888.3	RefSeq	CDS	4415129	4415944	.	+	0	ID=cds3973;Parent=gene4052;Dbxref=Genbank:NP_628202.1,GeneID:1099456;Name=NP_628202.1;Note=2SC10A7.24%2C probable two component system response regulator%2C len: 271 aa%3B similar to TR:O69730 (EMBL:AL022121) Mycobacterium tuberculosis two-component system regulator MTV025.113c%2C 234 aa%3B fasta scores: opt: 1111 z-score: 1309.2 E(): 0%3B 72.3%25 identity in 231 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=2SC10A7.24;product=two component system response regulator;protein_id=NP_628202.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4415261	4415596	.	+	.	ID=id5012;Dbxref=GeneID:1099456;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 138.60%2C E-value 1.1e-37;gbkey=misc_feature;gene=2SC10A7.24
NC_003888.3	RefSeq	sequence_feature	4415705	4415917	.	+	.	ID=id5013;Dbxref=GeneID:1099456;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 82.70%2C E-value 2e-23;gbkey=misc_feature;gene=2SC10A7.24
NC_003888.3	RefSeq	gene	4415941	4417515	.	+	.	ID=gene4053;Dbxref=GeneID:1099457;Name=2SC10A7.25;gbkey=Gene;gene=2SC10A7.25;gene_biotype=protein_coding;gene_synonym=2SC10A7.25;locus_tag=SCO4021
NC_003888.3	RefSeq	CDS	4415941	4417515	.	+	0	ID=cds3974;Parent=gene4053;Dbxref=Genbank:NP_628203.1,GeneID:1099457;Name=NP_628203.1;Note=2SC10A7.25%2C probable two component system histidine kinase%2C len: 524 aa%3B similar to SW:AFQ2_STRCO (EMBL:D10654) Streptomyces coelicolor sensor protein AfsQ2 (EC 2.7.3.-)%2C 535 aa%3B fasta scores: opt: 481 z-score: 498.8 E(): 2.8e-20%3B 29.0%25 identity in 517 aa overlap. Contains Pfam match to entry PF00672 DUF5%2C HAMP domain and PF00512 signal%2C Histidine kinase. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC10A7.25;product=two component system histidine kinase;protein_id=NP_628203.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4416484	4416723	.	+	.	ID=id5014;Dbxref=GeneID:1099457;Note=Pfam match to entry PF00672 DUF5%2C HAMP domain%2C score 34.00%2C E-value 3.4e-06;gbkey=misc_feature;gene=2SC10A7.25
NC_003888.3	RefSeq	sequence_feature	4416784	4417410	.	+	.	ID=id5015;Dbxref=GeneID:1099457;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 248.40%2C E-value 1e-70;gbkey=misc_feature;gene=2SC10A7.25
NC_003888.3	RefSeq	gene	4417530	4418879	.	+	.	ID=gene4054;Dbxref=GeneID:1099458;Name=2SC10A7.26;gbkey=Gene;gene=2SC10A7.26;gene_biotype=protein_coding;gene_synonym=2SC10A7.26;locus_tag=SCO4022
NC_003888.3	RefSeq	CDS	4417530	4418879	.	+	0	ID=cds3975;Parent=gene4054;Dbxref=Genbank:NP_628204.1,GeneID:1099458;Name=NP_628204.1;Note=2SC10A7.26%2C probable glycosyl transferase%2C len: 449 aa%3B similar to N-terminal region of TR:AAF72730 (EMBL:AF265258) Rhodococcus sp. S9 dolichyl-phosphate beta-glucosyltransferase%2C 342 aa%3B fasta scores: opt: 1385 z-score: 1585.5 E(): 0%3B 66.0%25 identity in 326 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases and possible hydrophobic membrane spanning regions at C-terminal domain. Also contains a 5x degenerate repeat unit: PDPH(L/R);gbkey=CDS;gene=2SC10A7.26;product=glycosyl transferase;protein_id=NP_628204.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4417608	4418114	.	+	.	ID=id5016;Dbxref=GeneID:1099458;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 27.10%2C E-value 0.00041;gbkey=misc_feature;gene=2SC10A7.26
NC_003888.3	RefSeq	repeat_region	4418784	4418858	.	+	.	ID=id5017;Dbxref=GeneID:1099458;Note=5x degenerate repeat unit translated in 2SC10A7.26;gbkey=repeat_region;gene=2SC10A7.26
NC_003888.3	RefSeq	ribosome_entry_site	4418863	4418866	.	+	.	ID=id5018;Dbxref=GeneID:1099458;gbkey=RBS;gene=2SC10A7.26
NC_003888.3	RefSeq	gene	4418876	4421077	.	+	.	ID=gene4055;Dbxref=GeneID:1099459;Name=2SC10A7.27;gbkey=Gene;gene=2SC10A7.27;gene_biotype=protein_coding;gene_synonym=2SC10A7.27;locus_tag=SCO4023
NC_003888.3	RefSeq	CDS	4418876	4421077	.	+	0	ID=cds3976;Parent=gene4055;Dbxref=Genbank:NP_628205.1,GeneID:1099459;Name=NP_628205.1;Note=2SC10A7.27%2C possible integral membrane protein%2C len: 733 aa%3B similar to TR:O34575 (EMBL:Z99110) Bacillus subtilis YkcB protein%2C 716 aa%3B fasta scores: opt: 768 z-score: 610.1 E(): 1.8e-26%3B 29.8%25 identity in 742 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC10A7.27;product=hypothetical protein;protein_id=NP_628205.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4419773	4419910	.	+	.	ID=id5019;Dbxref=GeneID:1099459;Note=high glycine amino acid residues content region;gbkey=misc_feature;gene=2SC10A7.27
NC_003888.3	RefSeq	sequence_feature	4420436	4420714	.	+	.	ID=id5020;Dbxref=GeneID:1099459;Note=high glycine amino acid residues and G+C (82.07%25) content region;gbkey=misc_feature;gene=2SC10A7.27
NC_003888.3	RefSeq	stem_loop	4421096	4421136	.	+	.	ID=id5021;Note=possible stem loop. Score 54: 18/18 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4421136	4422659	.	+	.	ID=gene4056;Dbxref=GeneID:1099460;Name=2SC10A7.28;gbkey=Gene;gene=2SC10A7.28;gene_biotype=protein_coding;gene_synonym=2SC10A7.28;locus_tag=SCO4024
NC_003888.3	RefSeq	CDS	4421136	4422659	.	+	0	ID=cds3977;Parent=gene4056;Dbxref=Genbank:NP_628206.1,GeneID:1099460;Name=NP_628206.1;Note=2SC10A7.28%2C probable integral membrane efflux protein%2C len: 507 aa%3B highly similar to TR:Q54806 (EMBL:X84072) Streptomyces pristinaespiralis integral membrane protein Ptr%2C 501 aa%3B fasta scores: opt: 2316 z-score: 2400.3 E(): 0%3B 72.8%25 identity in 496 aa overlap and to TR:Q9XE01 (EMBL:AB019519) virginiamycin S resistance protein from Streptomyces virginiae (518 aa) fasta scores%3B opt: 1972%2C Z-score: 1995.4%2C 62.828%25 identity (63.992%25 ungapped) in 495 aa overlap. Contains matches to Prosite entries PS00216 Sugar transport proteins signature 1 and PS00012 Phosphopantetheine attachment site. Also contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SC10A7.28;product=integral membrane efflux protein;protein_id=NP_628206.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4421382	4421432	.	+	.	ID=id5022;Dbxref=GeneID:1099460;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=2SC10A7.28
NC_003888.3	RefSeq	sequence_feature	4422540	4422587	.	+	.	ID=id5023;Dbxref=GeneID:1099460;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=2SC10A7.28
NC_003888.3	RefSeq	ribosome_entry_site	4422712	4422717	.	+	.	ID=id5024;gbkey=RBS
NC_003888.3	RefSeq	gene	4422721	4423479	.	+	.	ID=gene4057;Dbxref=GeneID:1099461;Name=2SC10A7.29;gbkey=Gene;gene=2SC10A7.29;gene_biotype=protein_coding;gene_synonym=2SC10A7.29;locus_tag=SCO4025
NC_003888.3	RefSeq	CDS	4422721	4423479	.	+	0	ID=cds3978;Parent=gene4057;Dbxref=Genbank:NP_628207.1,GeneID:1099461;Name=NP_628207.1;Note=2SC10A7.29%2C probable tetR family transcriptional regulatory protein%2C len: 252 aa%3B similar to SW:TER4_ECOLI (EMBL:X01083) Escherichia coli tetracycline repressor protein class D TetR%2C 217 aa%3B fasta scores: opt: 193 z-score: 236.9 E(): 1.1e-05%3B 27.4%25 identity in 226 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 53..74 (+3.83 SD);gbkey=CDS;gene=2SC10A7.29;product=TetR family transcriptional regulator;protein_id=NP_628207.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4422829	4422969	.	+	.	ID=id5025;Dbxref=GeneID:1099461;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 43.00%2C E-value 1.8e-09;gbkey=misc_feature;gene=2SC10A7.29
NC_003888.3	RefSeq	gene	4423549	4424019	.	-	.	ID=gene4058;Dbxref=GeneID:1099462;Name=2SC10A7.30c;gbkey=Gene;gene=2SC10A7.30c;gene_biotype=protein_coding;gene_synonym=2SC10A7.30c;locus_tag=SCO4026
NC_003888.3	RefSeq	CDS	4423549	4424019	.	-	0	ID=cds3979;Parent=gene4058;Dbxref=Genbank:NP_628208.1,GeneID:1099462;Name=NP_628208.1;Note=2SC10A7.30c%2C possible ATP binding protein%2C len: 156 aa%3B similar to TR:Q9XAG1 (EMBL:AL079356) Streptomyces coelicolor hypothetical 15.6 kDa protein SC6G9.21%2C 144 aa%3B fasta scores: opt: 278 z-score: 351.7 E(): 4.4e-12%3B 42.5%25 identity in 120 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SC10A7.30c;product=ATP binding protein;protein_id=NP_628208.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4423627	4423650	.	-	.	ID=id5026;Dbxref=GeneID:1099462;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC10A7.30c
NC_003888.3	RefSeq	gene	4424029	4424409	.	-	.	ID=gene4059;Dbxref=GeneID:1099463;Name=2SC10A7.31c;gbkey=Gene;gene=2SC10A7.31c;gene_biotype=protein_coding;gene_synonym=2SC10A7.31c;locus_tag=SCO4027
NC_003888.3	RefSeq	CDS	4424029	4424409	.	-	0	ID=cds3980;Parent=gene4059;Dbxref=Genbank:NP_628209.1,GeneID:1099463;Name=NP_628209.1;Note=2SC10A7.31c%2C probable anti sigma factor antagonist%2C len: 126 aa%3B similar to SW:RSBV_STRCO (EMBL:AF134889) Streptomyces coelicolor anti-sigma B factor antagonist RsbV or BldG%2C 113 aa%3B fasta scores: opt: 131 z-score: 175.0 E(): 0.03%3B 30.4%25 identity in 102 aa overlap. Contains Pfam match to entry PF01740 STAS%2C STAS domain;gbkey=CDS;gene=2SC10A7.31c;product=anti sigma factor antagonist;protein_id=NP_628209.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4424059	4424391	.	-	.	ID=id5027;Dbxref=GeneID:1099463;Note=Pfam match to entry PF01740 STAS%2C STAS domain%2C score 40.70%2C E-value 3.4e-08;gbkey=misc_feature;gene=2SC10A7.31c
NC_003888.3	RefSeq	gene	4424566	4425387	.	+	.	ID=gene4060;Dbxref=GeneID:1099464;Name=2SC10A7.32;gbkey=Gene;gene=2SC10A7.32;gene_biotype=protein_coding;gene_synonym=2SC10A7.32;locus_tag=SCO4028
NC_003888.3	RefSeq	CDS	4424566	4425387	.	+	0	ID=cds3981;Parent=gene4060;Dbxref=Genbank:NP_628210.1,GeneID:1099464;Name=NP_628210.1;Note=2SC10A7.32%2C hypothetical protein%2C len: 273 aa%3B similar to TR:CAB76342 (EMBL:AL158061) Streptomyces coelicolor hypothetical 26.1 kDa protein SC6D11.19c%2C 236 aa%3B fasta scores: opt: 291 z-score: 349.8 E(): 5.6e-12%3B 33.0%25 identity in 221 aa overlap. Contains Pfam match to entry PF01590 GAF%2C GAF domain;gbkey=CDS;gene=2SC10A7.32;product=hypothetical protein;protein_id=NP_628210.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4424755	4425177	.	+	.	ID=id5028;Dbxref=GeneID:1099464;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 28.40%2C E-value 0.00016;gbkey=misc_feature;gene=2SC10A7.32
NC_003888.3	RefSeq	gene	4425406	4426155	.	+	.	ID=gene4061;Dbxref=GeneID:1099465;Name=2SC10A7.33;gbkey=Gene;gene=2SC10A7.33;gene_biotype=protein_coding;gene_synonym=2SC10A7.33;locus_tag=SCO4029
NC_003888.3	RefSeq	CDS	4425406	4426155	.	+	0	ID=cds3982;Parent=gene4061;Dbxref=Genbank:NP_628211.1,GeneID:1099465;Name=NP_628211.1;Note=2SC10A7.33%2C hypothetical protein%2C len: 249 aa%3B similar to TR:CAB76342 (EMBL:AL158061) Streptomyces coelicolor hypothetical 26.1 kDa protein SC6D11.19c%2C 236 aa%3B fasta scores: opt: 330 z-score: 392.0 E(): 2.5e-14%3B 32.7%25 identity in 226 aa overlap;gbkey=CDS;gene=2SC10A7.33;product=hypothetical protein;protein_id=NP_628211.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4425418	4425483	.	+	.	ID=id5029;Dbxref=GeneID:1099465;Note=high aspartic acid and threonine amino acid residues content region;gbkey=misc_feature;gene=2SC10A7.33
NC_003888.3	RefSeq	gene	4426138	4426959	.	-	.	ID=gene4062;Dbxref=GeneID:1099466;Name=2SC10A7.34c;gbkey=Gene;gene=2SC10A7.34c;gene_biotype=protein_coding;gene_synonym=2SC10A7.34c;locus_tag=SCO4030
NC_003888.3	RefSeq	CDS	4426138	4426959	.	-	0	ID=cds3983;Parent=gene4062;Dbxref=Genbank:NP_628212.1,GeneID:1099466;Name=NP_628212.1;Note=2SC10A7.34c%2C hypothetical protein%2C len: 273 aa%3B similar to TR:Q9RDM0 (EMBL:AL136518) Streptomyces coelicolor hypothetical 31.6 kDa protein SCC123.04c%2C 293 aa%3B fasta scores: opt: 731 z-score: 837.9 E(): 0%3B 45.8%25 identity in 264 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SC10A7.34c;product=hypothetical protein;protein_id=NP_628212.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4426543	4426566	.	-	.	ID=id5030;Dbxref=GeneID:1099466;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC10A7.34c
NC_003888.3	RefSeq	ribosome_entry_site	4426968	4426971	.	-	.	ID=id5031;gbkey=RBS
NC_003888.3	RefSeq	gene	4427069	4429648	.	-	.	ID=gene4063;Dbxref=GeneID:1099467;Name=2SC10A7.35c;gbkey=Gene;gene=2SC10A7.35c;gene_biotype=protein_coding;gene_synonym=2SC10A7.35c;locus_tag=SCO4031
NC_003888.3	RefSeq	CDS	4427069	4429648	.	-	0	ID=cds3984;Parent=gene4063;Dbxref=Genbank:NP_628213.1,GeneID:1099467;Name=NP_628213.1;Note=2SC10A7.35c%2C probable integral membrane transport protein%2C len: 859 aa%3B similar to TR:Q9ZBJ1 (EMBL:AL035161) Streptomyces coelicolor efflux protein SC9C7.19%2C 815 aa%3B fasta scores: opt: 1355 z-score: 1335.4 E(): 0%3B 40.2%25 identity in 844 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and possible hydrophobic membrane spanning regions in N-terminal domain;gbkey=CDS;gene=2SC10A7.35c;product=integral membrane transport protein;protein_id=NP_628213.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4428203	4429531	.	-	.	ID=id5032;Dbxref=GeneID:1099467;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -95.10%2C E-value 0.0018;gbkey=misc_feature;gene=2SC10A7.35c
NC_003888.3	RefSeq	gene	4429662	4430162	.	-	.	ID=gene4064;Dbxref=GeneID:1099468;Name=2SC10A7.36c;gbkey=Gene;gene=2SC10A7.36c;gene_biotype=protein_coding;gene_synonym=2SC10A7.36c;locus_tag=SCO4032
NC_003888.3	RefSeq	CDS	4429662	4430162	.	-	0	ID=cds3985;Parent=gene4064;Dbxref=Genbank:NP_628214.1,GeneID:1099468;Name=NP_628214.1;Note=2SC10A7.36c%2C probable marR regulatory protein%2C len: 166 aa%3B similar to SW:MARR_ECOLI (EMBL:M96235) Escherichia coli multiple antibiotic resistance protein MarR%2C 125 aa%3B fasta scores: opt: 164 z-score: 211.9 E(): 0.00027%3B 27.3%25 identity in 110 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=2SC10A7.36c;product=marR regulatory protein;protein_id=NP_628214.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4429758	4430069	.	-	.	ID=id5033;Dbxref=GeneID:1099468;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 71.40%2C E-value 1.9e-17;gbkey=misc_feature;gene=2SC10A7.36c
NC_003888.3	RefSeq	ribosome_entry_site	4430166	4430172	.	-	.	ID=id5034;gbkey=RBS
NC_003888.3	RefSeq	gene	4430278	4430568	.	+	.	ID=gene4065;Dbxref=GeneID:1099469;Name=2SC10A7.37;gbkey=Gene;gene=2SC10A7.37;gene_biotype=protein_coding;gene_synonym=2SC10A7.37;locus_tag=SCO4033
NC_003888.3	RefSeq	CDS	4430278	4430568	.	+	0	ID=cds3986;Parent=gene4065;Dbxref=Genbank:NP_628215.1,GeneID:1099469;Name=NP_628215.1;Note=2SC10A7.37%2C possible membrane protein%2C len: 96 aa. Contains possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=2SC10A7.37;product=hypothetical protein;protein_id=NP_628215.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4430497	4430559	.	+	.	ID=id5035;Dbxref=GeneID:1099469;Note=high alanine and valine amino acid residues content region;gbkey=misc_feature;gene=2SC10A7.37
NC_003888.3	RefSeq	gene	4430684	4431640	.	-	.	ID=gene4066;Dbxref=GeneID:1099470;Name=2SC10A7.38c;gbkey=Gene;gene=2SC10A7.38c;gene_biotype=protein_coding;gene_synonym=2SC10A7.38c;locus_tag=SCO4034
NC_003888.3	RefSeq	CDS	4430684	4431640	.	-	0	ID=cds3987;Parent=gene4066;Dbxref=Genbank:NP_628216.1,GeneID:1099470;Name=NP_628216.1;Note=2SC10A7.38c%2C probable RNA polymerase sigma factor%2C len: 318 aa%3B highly similar to TR:Q9RIS5 (EMBL:AJ249581) Streptomyces coelicolor A3(2) Sig15 protein%2C 304 aa%3B fasta scores: opt: 1201 z-score: 1341.5 E(): 0%3B 66.6%25 identity in 287 aa overlap and to SW:RPOF_STRCO (EMBL:L11648) Streptomyces coelicolor RNA polymerase sigma-F factor SigF or RpoX%2C 287 aa%3B fasta scores: opt: 950 z-score: 1063.4 E(): 0%3B 58.6%25 identity in 261 aa overlap. Contains Pfam match to entry PF00140 sigma70%2C Sigma-70 factor and match to Prosite entry PS00715 Sigma-70 factors family signature 1. Also contains a possible helix-turn-helix motif at residues 284..305 (+6.30 SD);gbkey=CDS;gene=2SC10A7.38c;product=RNA polymerase sigma factor;protein_id=NP_628216.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4430702	4431370	.	-	.	ID=id5036;Dbxref=GeneID:1099470;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 286.00%2C E-value 4.7e-82;gbkey=misc_feature;gene=2SC10A7.38c
NC_003888.3	RefSeq	sequence_feature	4431239	4431280	.	-	.	ID=id5037;Dbxref=GeneID:1099470;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=2SC10A7.38c
NC_003888.3	RefSeq	sequence_feature	4431604	4432028	.	-	.	ID=id5038;Note=previously sequenced DNA fragment. EMBL:L11648 Streptomyces coelicolor sigma factor (rpoX) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4431926	4433665	.	-	.	ID=id5039;Note=previously sequenced DNA fragment. EMBL:L11648 Streptomyces coelicolor sigma factor (rpoX) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4431932	4432795	.	-	.	ID=gene4067;Dbxref=GeneID:1099471;Name=2SCD60.01c;gbkey=Gene;gene=2SCD60.01c;gene_biotype=protein_coding;gene_synonym=2SCD60.01c,sigF;locus_tag=SCO4035
NC_003888.3	RefSeq	CDS	4431932	4432795	.	-	0	ID=cds3988;Parent=gene4067;Dbxref=Genbank:NP_628217.1,GeneID:1099471;Name=NP_628217.1;Note=2SC10A7.39c%2C sigF%2C RNA polymerase sigma factor (fragment)%2C len: >31 aa%3B identical to previously sequenced SW:RPOF_STRCO (EMBL:L11648) Streptomyces coelicolor RNA polymerase sigma factor SigF or RpoX%2C 278 aa~2SCD60.01c%2C sigF%2C RNA polymerase sigma factor%2C len: 287 aa%3B identical to previously sequenced SW:RPOF_STRCO (EMBL:L11648) Streptomyces coelicolor RNA polymerase sigma factor sigma-F SigF or RpoX%2C 287 aa. Contains Pfam match to entry PF00140 sigma70%2C Sigma-70 factor and match to Prosite entry PS00715 Sigma-70 factors family signature 1. Also contains possible helix-turn-helix motif at residues 252..273 (+6.22 SD);gbkey=CDS;gene=2SCD60.01c;product=RNA polymerase sigma factor;protein_id=NP_628217.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4431953	4432615	.	-	.	ID=id5040;Dbxref=GeneID:1099471;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 340.20%2C E-value 2.3e-98;gbkey=misc_feature;gene=2SCD60.01c
NC_003888.3	RefSeq	sequence_feature	4432484	4432525	.	-	.	ID=id5041;Dbxref=GeneID:1099471;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=2SCD60.01c
NC_003888.3	RefSeq	sequence_feature	4432621	4432768	.	-	.	ID=id5042;Dbxref=GeneID:1099471;Note=high G+C content region (83.78%25);gbkey=misc_feature;gene=2SCD60.01c
NC_003888.3	RefSeq	sequence_feature	4432701	4432780	.	-	.	ID=id5043;Dbxref=GeneID:1099471;Note=high content in alanine%2C proline and glutamine amino acid residues;gbkey=misc_feature;gene=2SCD60.01c
NC_003888.3	RefSeq	ribosome_entry_site	4432802	4432805	.	-	.	ID=id5044;gbkey=RBS
NC_003888.3	RefSeq	gene	4432988	4433281	.	-	.	ID=gene4068;Dbxref=GeneID:1099472;Name=2SCD60.02c;gbkey=Gene;gene=2SCD60.02c;gene_biotype=protein_coding;gene_synonym=2SCD60.02c;locus_tag=SCO4036
NC_003888.3	RefSeq	CDS	4432988	4433281	.	-	0	ID=cds3989;Parent=gene4068;Dbxref=Genbank:NP_628218.1,GeneID:1099472;Name=NP_628218.1;Note=2SCD60.02c%2C hypothetical protein%2C len: 97 aa%3B identical to previously sequenced SW:YRPX_STRCO (EMBL:L11648) Streptomyces coelicolor hypothetical 11.1 kDa protein in RpoX 5' region%2C 97 aa;gbkey=CDS;gene=2SCD60.02c;product=hypothetical protein;protein_id=NP_628218.1;transl_table=11
NC_003888.3	RefSeq	gene	4433281	4433457	.	-	.	ID=gene4069;Dbxref=GeneID:1099473;Name=2SCD60.03c;gbkey=Gene;gene=2SCD60.03c;gene_biotype=protein_coding;gene_synonym=2SCD60.03c;locus_tag=SCO4037
NC_003888.3	RefSeq	CDS	4433281	4433457	.	-	0	ID=cds3990;Parent=gene4069;Dbxref=Genbank:NP_628219.1,GeneID:1099473;Name=NP_628219.1;Note=2SCD60.03c%2C possible small membrane protein%2C len: 58 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCD60.03c;product=small membrane protein;protein_id=NP_628219.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4433288	4433292	.	-	.	ID=id5045;Dbxref=GeneID:1099473;gbkey=RBS;gene=2SCD60.03c
NC_003888.3	RefSeq	ribosome_entry_site	4433463	4433467	.	-	.	ID=id5046;gbkey=RBS
NC_003888.3	RefSeq	gene	4433546	4433630	.	-	.	ID=gene4070;Dbxref=GeneID:3240040;Name=SCOt37;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt37
NC_003888.3	RefSeq	tRNA	4433546	4433630	.	-	.	ID=rna50;Parent=gene4070;Dbxref=GeneID:3240040;Note=tRNA Ser anticodon CGA%2C Cove score 55.75;gbkey=tRNA;product=tRNA-Ser
NC_003888.3	RefSeq	exon	4433546	4433630	.	-	.	ID=id5047;Parent=rna50;Dbxref=GeneID:3240040;Note=tRNA Ser anticodon CGA%2C Cove score 55.75;gbkey=tRNA;product=tRNA-Ser
NC_003888.3	RefSeq	gene	4433708	4434139	.	-	.	ID=gene4071;Dbxref=GeneID:1099474;Name=2SCD60.04c;gbkey=Gene;gene=2SCD60.04c;gene_biotype=protein_coding;gene_synonym=2SCD60.04c;locus_tag=SCO4038
NC_003888.3	RefSeq	CDS	4433708	4434139	.	-	0	ID=cds3991;Parent=gene4071;Dbxref=Genbank:NP_628220.1,GeneID:1099474;Name=NP_628220.1;Note=2SCD60.04c%2C possible deaminase%2C len: 143 aa%3B similar to TR:AAG28837 (EMBL:AF160969) Bifidobacterium longum cytosine deaminase%2C 143 aa%3B fasta scores: opt: 553 z-score: 690.3 E(): 6.9e-31%3B 56.6%25 identity in 143 aa overlap. Contains Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region and match to Prosite entry PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature;gbkey=CDS;gene=2SCD60.04c;product=deaminase;protein_id=NP_628220.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4433861	4434106	.	-	.	ID=id5048;Dbxref=GeneID:1099474;Note=Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region%2C score 123.70%2C E-value 3.3e-33;gbkey=misc_feature;gene=2SCD60.04c
NC_003888.3	RefSeq	sequence_feature	4433885	4433998	.	-	.	ID=id5049;Dbxref=GeneID:1099474;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature;gbkey=misc_feature;gene=2SCD60.04c
NC_003888.3	RefSeq	gene	4434208	4434756	.	-	.	ID=gene4072;Dbxref=GeneID:1099475;Name=2SCD60.05c;gbkey=Gene;gene=2SCD60.05c;gene_biotype=protein_coding;gene_synonym=2SCD60.05c;locus_tag=SCO4039
NC_003888.3	RefSeq	CDS	4434208	4434756	.	-	0	ID=cds3992;Parent=gene4072;Dbxref=Genbank:NP_628221.1,GeneID:1099475;Name=NP_628221.1;Note=2SCD60.05c%2C unknown%2C len: 182 aa;gbkey=CDS;gene=2SCD60.05c;product=hypothetical protein;protein_id=NP_628221.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4434764	4434767	.	-	.	ID=id5050;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4434925	4434928	.	+	.	ID=id5051;gbkey=RBS
NC_003888.3	RefSeq	gene	4434929	4435393	.	+	.	ID=gene4073;Dbxref=GeneID:1099476;Name=2SCD60.06;gbkey=Gene;gene=2SCD60.06;gene_biotype=protein_coding;gene_synonym=2SCD60.06;locus_tag=SCO4040
NC_003888.3	RefSeq	CDS	4434929	4435393	.	+	0	ID=cds3993;Parent=gene4073;Dbxref=Genbank:NP_628222.1,GeneID:1099476;Name=NP_628222.1;Note=2SCD60.06%2C unknown%2C len: 154 aa;gbkey=CDS;gene=2SCD60.06;product=hypothetical protein;protein_id=NP_628222.1;transl_table=11
NC_003888.3	RefSeq	gene	4435469	4436113	.	+	.	ID=gene4074;Dbxref=GeneID:1099477;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;gene_synonym=2SCD60.07;locus_tag=SCO4041
NC_003888.3	RefSeq	CDS	4435469	4436113	.	+	0	ID=cds3994;Parent=gene4074;Dbxref=Genbank:NP_628223.1,GeneID:1099477;Name=NP_628223.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=NP_628223.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4435565	4436026	.	+	.	ID=id5052;Dbxref=GeneID:1099477;Note=Pfam match to entry PF00156 Pribosyltran%2C Phosphoribosyl transferase domain%2C score 12.40%2C E-value 0.0009;gbkey=misc_feature;gene=upp
NC_003888.3	RefSeq	gene	4436138	4436752	.	-	.	ID=gene4075;Dbxref=GeneID:1099478;Name=2SCD60.08c;gbkey=Gene;gene=2SCD60.08c;gene_biotype=protein_coding;gene_synonym=2SCD60.08c;locus_tag=SCO4042
NC_003888.3	RefSeq	CDS	4436138	4436752	.	-	0	ID=cds3995;Parent=gene4075;Dbxref=Genbank:NP_628224.1,GeneID:1099478;Name=NP_628224.1;Note=2SCD60.08c%2C membrane protein%2C len: 204 aa%3B similar to TR:O07202 (EMBL:Z96072) Mycobacterium tuberculosis hypothetical 22.7 kDa protein MTCY05A6.21%2C 216 aa%3B fasta scores: opt: 193 z-score: 226.9 E(): 4.5e-05%3B 31.3%25 identity in 192 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCD60.08c;product=hypothetical protein;protein_id=NP_628224.1;transl_table=11
NC_003888.3	RefSeq	gene	4436888	4437184	.	-	.	ID=gene4076;Dbxref=GeneID:1099479;Name=2SCD60.09c;gbkey=Gene;gene=2SCD60.09c;gene_biotype=protein_coding;gene_synonym=2SCD60.09c;locus_tag=SCO4043
NC_003888.3	RefSeq	CDS	4436888	4437184	.	-	0	ID=cds3996;Parent=gene4076;Dbxref=Genbank:NP_628225.1,GeneID:1099479;Name=NP_628225.1;Note=2SCD60.09c%2C conserved hypothetical protein%2C len: 98 aa%3B similar to TR:O05823 (EMBL:Z95208) Mycobacterium tuberculosis hypothetical 12.0 kDa protein MTCY27.05c%2C 105 aa%3B fasta scores: opt: 419 z-score: 582.4 E(): 7e-25%3B 62.2%25 identity in 98 aa overlap;gbkey=CDS;gene=2SCD60.09c;product=hypothetical protein;protein_id=NP_628225.1;transl_table=11
NC_003888.3	RefSeq	gene	4437234	4437938	.	+	.	ID=gene4077;Dbxref=GeneID:1099480;Name=2SCD60.10;gbkey=Gene;gene=2SCD60.10;gene_biotype=protein_coding;gene_synonym=2SCD60.10;locus_tag=SCO4044
NC_003888.3	RefSeq	CDS	4437234	4437938	.	+	0	ID=cds3997;Parent=gene4077;Dbxref=Genbank:NP_628226.1,GeneID:1099480;Name=NP_628226.1;Note=2SCD60.10%2C unknown%2C len: 234 aa;gbkey=CDS;gene=2SCD60.10;product=hypothetical protein;protein_id=NP_628226.1;transl_table=11
NC_003888.3	RefSeq	gene	4437969	4438649	.	-	.	ID=gene4078;Dbxref=GeneID:1099481;Name=2SCD60.11c;gbkey=Gene;gene=2SCD60.11c;gene_biotype=protein_coding;gene_synonym=2SCD60.11c;locus_tag=SCO4045
NC_003888.3	RefSeq	CDS	4437969	4438649	.	-	0	ID=cds3998;Parent=gene4078;Dbxref=Genbank:NP_628227.1,GeneID:1099481;Name=NP_628227.1;Note=2SCD60.11c%2C possible integral membrane protein%2C len: 226 aa%3B similar to TR:O06141 (EMBL:Z95554) Mycobacterium tuberculosis hypothetical 20.4 kDa protein MTCY01B2.16c%2C 195 aa%3B fasta scores: opt: 628 z-score: 680.7 E(): 2.4e-30%3B 50.8%25 identity in 191 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCD60.11c;product=hypothetical protein;protein_id=NP_628227.1;transl_table=11
NC_003888.3	RefSeq	gene	4438739	4439197	.	-	.	ID=gene4079;Dbxref=GeneID:1099482;Name=2SCD60.12c;gbkey=Gene;gene=2SCD60.12c;gene_biotype=protein_coding;gene_synonym=2SCD60.12c;locus_tag=SCO4046
NC_003888.3	RefSeq	CDS	4438739	4439197	.	-	0	ID=cds3999;Parent=gene4079;Dbxref=Genbank:NP_628228.1,GeneID:1099482;Name=NP_628228.1;Note=2SCD60.12c%2C unknown%2C len: 152 aa;gbkey=CDS;gene=2SCD60.12c;product=hypothetical protein;protein_id=NP_628228.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4438793	4438968	.	-	.	ID=id5053;Dbxref=GeneID:1099482;Note=high G+C content region (84.65%25);gbkey=misc_feature;gene=2SCD60.12c
NC_003888.3	RefSeq	gene	4439198	4439791	.	-	.	ID=gene4080;Dbxref=GeneID:1099483;Name=2SCD60.13c;gbkey=Gene;gene=2SCD60.13c;gene_biotype=protein_coding;gene_synonym=2SCD60.13c;locus_tag=SCO4047
NC_003888.3	RefSeq	CDS	4439198	4439791	.	-	0	ID=cds4000;Parent=gene4080;Dbxref=Genbank:NP_628229.1,GeneID:1099483;Name=NP_628229.1;Note=2SCD60.13c%2C conserved hypothetical protein%2C len: 197 aa%3B similar to TR:O06554 (EMBL:Z95584) Mycobacterium tuberculosis hypothetical 20.8 kDa protein MTCI65.23%2C 197 aa%3B fasta scores: opt: 741 z-score: 862.4 E(): 0%3B 60.6%25 identity in 188 aa overlap;gbkey=CDS;gene=2SCD60.13c;product=hypothetical protein;protein_id=NP_628229.1;transl_table=11
NC_003888.3	RefSeq	gene	4439817	4440542	.	-	.	ID=gene4081;Dbxref=GeneID:1099484;Name=2SCD60.14c;gbkey=Gene;gene=2SCD60.14c;gene_biotype=protein_coding;gene_synonym=2SCD60.14c;locus_tag=SCO4048
NC_003888.3	RefSeq	CDS	4439817	4440542	.	-	0	ID=cds4001;Parent=gene4081;Dbxref=Genbank:NP_628230.1,GeneID:1099484;Name=NP_628230.1;Note=2SCD60.14c%2C hypothetical protein%2C len: 241 aa%3B similar to TR:Q9RL28 (EMBL:AL121596) Streptomyces coelicolor hypothetical 28.7 kDa protein SCF51A.37%2C 259 aa%3B fasta scores: opt: 255 z-score: 307.0 E(): 1.5e-09%3B 30.2%25 identity in 225 aa overlap;gbkey=CDS;gene=2SCD60.14c;product=hypothetical protein;protein_id=NP_628230.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4440546	4440550	.	-	.	ID=id5054;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4440616	4440619	.	+	.	ID=id5055;gbkey=RBS
NC_003888.3	RefSeq	gene	4440627	4442975	.	+	.	ID=gene4082;Dbxref=GeneID:1099485;Name=2SCD60.15;gbkey=Gene;gene=2SCD60.15;gene_biotype=protein_coding;gene_synonym=2SCD60.15;locus_tag=SCO4049
NC_003888.3	RefSeq	CDS	4440627	4442975	.	+	0	ID=cds4002;Parent=gene4082;Dbxref=Genbank:NP_628231.1,GeneID:1099485;Name=NP_628231.1;Note=2SCD60.15%2C probable antibiotic hydrolase%2C len: 782 aa%3B similar to SW:PAC2_PSES3 (EMBL:M18278) Pseudomonas sp. penicillin acylase II precursor (EC 3.5.1.11) AcyII%2C 773 aa%3B fasta scores: opt: 701 z-score: 597.1 E(): 1.1e-25%3B 33.5%25 identity in 841 aa overlap. Contains 3x Pfam matches to entry PF01804 Penicil_amidase%2C Penicillin amidase. Also contains 11x degenerate repeat (S/P)(E/K)(A/T)A(L/P)- and 4x degenerate repeat TP(L/E);gbkey=CDS;gene=2SCD60.15;product=antibiotic binding protein;protein_id=NP_628231.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4440633	4441133	.	+	.	ID=id5056;Dbxref=GeneID:1099485;Note=Pfam match to entry PF01804 Penicil_amidase%2C Penicillin amidase%2C score 50.30%2C E-value 6.4e-13;gbkey=misc_feature;gene=2SCD60.15
NC_003888.3	RefSeq	sequence_feature	4441146	4441835	.	+	.	ID=id5057;Dbxref=GeneID:1099485;Note=Pfam match to entry PF01804 Penicil_amidase%2C Penicillin amidase%2C score 118.70%2C E-value 1.1e-31;gbkey=misc_feature;gene=2SCD60.15
NC_003888.3	RefSeq	sequence_feature	4442064	4442261	.	+	.	ID=id5058;Dbxref=GeneID:1099485;Note=6x degenerate repeat translated in 2SCD60.15;gbkey=misc_feature;gene=2SCD60.15
NC_003888.3	RefSeq	sequence_feature	4442304	4442339	.	+	.	ID=id5059;Dbxref=GeneID:1099485;Note=4x degenerate repeat translated in 2SCD60.15;gbkey=misc_feature;gene=2SCD60.15
NC_003888.3	RefSeq	sequence_feature	4442817	4442909	.	+	.	ID=id5060;Dbxref=GeneID:1099485;Note=Pfam match to entry PF01804 Penicil_amidase%2C Penicillin amidase%2C score 12.50%2C E-value 0.011;gbkey=misc_feature;gene=2SCD60.15
NC_003888.3	RefSeq	ribosome_entry_site	4442958	4442962	.	+	.	ID=id5061;Dbxref=GeneID:1099485;gbkey=RBS;gene=2SCD60.15
NC_003888.3	RefSeq	gene	4442968	4443588	.	+	.	ID=gene4083;Dbxref=GeneID:1099486;Name=2SCD60.16;gbkey=Gene;gene=2SCD60.16;gene_biotype=protein_coding;gene_synonym=2SCD60.16;locus_tag=SCO4050
NC_003888.3	RefSeq	CDS	4442968	4443588	.	+	0	ID=cds4003;Parent=gene4083;Dbxref=Genbank:NP_628232.1,GeneID:1099486;Name=NP_628232.1;Note=2SCD60.16%2C possible acetyltransferase%2C len: 206 aa%3B similar to TR:P94254 (EMBL:U61153) Bordetella bronchiseptica alcaligin biosynthesis protein AlcB%2C 201 aa%3B fasta scores: opt: 325 z-score: 399.6 E(): 1.1e-14%3B 37.2%25 identity in 183 aa overlap and to SW:AAC6_SERMA (EMBL:M23634) Serratia marcescens aminoglycoside N6'-acetyltransferase (EC 2.3.1.82) AacA4%2C 201 aa%3B fasta scores: opt: 155 z-score: 196.0 E(): 0.0023%3B 25.7%25 identity in 171 aa overlap;gbkey=CDS;gene=2SCD60.16;product=acetyltransferase;protein_id=NP_628232.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4443567	4443572	.	+	.	ID=id5062;Dbxref=GeneID:1099486;gbkey=RBS;gene=2SCD60.16
NC_003888.3	RefSeq	gene	4443585	4444082	.	+	.	ID=gene4084;Dbxref=GeneID:1099487;Name=2SCD60.17;gbkey=Gene;gene=2SCD60.17;gene_biotype=protein_coding;gene_synonym=2SCD60.17;locus_tag=SCO4051
NC_003888.3	RefSeq	CDS	4443585	4444082	.	+	0	ID=cds4004;Parent=gene4084;Dbxref=Genbank:NP_628233.1,GeneID:1099487;Name=NP_628233.1;Note=2SCD60.17%2C conserved hypothetical protein%2C len: 165 aa%3B similar to TR:P72845 (EMBL:D90901) Synechocystis sp. hypothetical 18.8 kDa protein SLL1188%2C 164 aa%3B fasta scores: opt: 339 z-score: 385.2 E(): 6.8e-14%3B 38.3%25 identity in 154 aa overlap;gbkey=CDS;gene=2SCD60.17;product=hypothetical protein;protein_id=NP_628233.1;transl_table=11
NC_003888.3	RefSeq	gene	4444079	4444873	.	+	.	ID=gene4085;Dbxref=GeneID:1099488;Name=2SCD60.18;gbkey=Gene;gene=2SCD60.18;gene_biotype=protein_coding;gene_synonym=2SCD60.18;locus_tag=SCO4052
NC_003888.3	RefSeq	CDS	4444079	4444873	.	+	0	ID=cds4005;Parent=gene4085;Dbxref=Genbank:NP_628234.1,GeneID:1099488;Name=NP_628234.1;Note=2SCD60.18%2C probable glucose 1-dehydrogenase%2C len: 264 aa%3B similar to SW:DHG2_BACME (EMBL:D90044) Bacillus megaterium glucose 1-dehydrogenase II (EC 1.1.1.47) GdhII%2C 261 aa%3B fasta scores: opt: 563 z-score: 619.9 E(): 5.7e-27%3B 38.7%25 identity in 256 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus;gbkey=CDS;gene=2SCD60.18;product=glucose 1-dehydrogenase;protein_id=NP_628234.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4444127	4444690	.	+	.	ID=id5063;Dbxref=GeneID:1099488;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 181.10%2C E-value 1.7e-50;gbkey=misc_feature;gene=2SCD60.18
NC_003888.3	RefSeq	sequence_feature	4444748	4444840	.	+	.	ID=id5064;Dbxref=GeneID:1099488;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 57.50%2C E-value 1.1e-14;gbkey=misc_feature;gene=2SCD60.18
NC_003888.3	RefSeq	ribosome_entry_site	4444950	4444953	.	+	.	ID=id5065;gbkey=RBS
NC_003888.3	RefSeq	gene	4445276	4447045	.	+	.	ID=gene4086;Dbxref=GeneID:1099489;Name=2SCD60.19;gbkey=Gene;gene=2SCD60.19;gene_biotype=protein_coding;gene_synonym=2SCD60.19;locus_tag=SCO4053
NC_003888.3	RefSeq	CDS	4445276	4447045	.	+	0	ID=cds4006;Parent=gene4086;Dbxref=Genbank:NP_628235.1,GeneID:1099489;Name=NP_628235.1;Note=2SCD60.19%2C possible transport integral membrane protein%2C len: 589 aa%3B similar to TR:P94432 (EMBL:D50453) Bacillus subtilis homologue of copper export protein YcnJ%2C 541 aa%3B fasta scores: opt: 394 z-score: 369.0 E(): 5.4e-13%3B 27.8%25 identity in 442 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCD60.19;product=transport integral membrane protein;protein_id=NP_628235.1;transl_table=11
NC_003888.3	RefSeq	gene	4447284	4447970	.	+	.	ID=gene4087;Dbxref=GeneID:1099490;Name=2SCD60.20;gbkey=Gene;gene=2SCD60.20;gene_biotype=protein_coding;gene_synonym=2SCD60.20;locus_tag=SCO4054
NC_003888.3	RefSeq	CDS	4447284	4447970	.	+	0	ID=cds4007;Parent=gene4087;Dbxref=Genbank:NP_628236.1,GeneID:1099490;Name=NP_628236.1;Note=2SCD60.20%2C possible integral membrane protein%2C len: 228 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCD60.20;product=hypothetical protein;protein_id=NP_628236.1;transl_table=11
NC_003888.3	RefSeq	gene	4447967	4449100	.	-	.	ID=gene4088;Dbxref=GeneID:1099491;Name=2SCD60.21c;gbkey=Gene;gene=2SCD60.21c;gene_biotype=protein_coding;gene_synonym=2SCD60.21c;locus_tag=SCO4055
NC_003888.3	RefSeq	CDS	4447967	4449100	.	-	0	ID=cds4008;Parent=gene4088;Dbxref=Genbank:NP_628237.1,GeneID:1099491;Name=NP_628237.1;Note=2SCD60.21c%2C probable alcohol dehydrogenase%2C len: 377 aa%3B similar to SW:FADH_PSEPU (EMBL:D21201) Pseudomonas putida glutathione-independent formaldehyde dehydrogenase (EC 1.2.1.46) FdhA%2C 398 aa%3B fasta scores: opt: 1048 z-score: 1080.0 E(): 0%3B 47.9%25 identity in 390 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and match to Prosite entry PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=CDS;gene=2SCD60.21c;product=alcohol dehydrogenase;protein_id=NP_628237.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4447970	4449070	.	-	.	ID=id5066;Dbxref=GeneID:1099491;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 225.80%2C E-value 6.1e-64;gbkey=misc_feature;gene=2SCD60.21c
NC_003888.3	RefSeq	sequence_feature	4448885	4448929	.	-	.	ID=id5067;Dbxref=GeneID:1099491;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=2SCD60.21c
NC_003888.3	RefSeq	ribosome_entry_site	4449108	4449112	.	-	.	ID=id5068;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4449225	4449233	.	+	.	ID=id5069;gbkey=RBS
NC_003888.3	RefSeq	gene	4449241	4449432	.	+	.	ID=gene4089;Dbxref=GeneID:1099492;Name=2SCD60.22;gbkey=Gene;gene=2SCD60.22;gene_biotype=protein_coding;gene_synonym=2SCD60.22;locus_tag=SCO4056
NC_003888.3	RefSeq	CDS	4449241	4449432	.	+	0	ID=cds4009;Parent=gene4089;Dbxref=Genbank:NP_628238.1,GeneID:1099492;Name=NP_628238.1;Note=2SCD60.22%2C hypothetical protein%2C len: 63 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCD60.22;product=hypothetical protein;protein_id=NP_628238.1;transl_table=11
NC_003888.3	RefSeq	gene	4449455	4450345	.	-	.	ID=gene4090;Dbxref=GeneID:1099493;Name=2SCD60.23c;gbkey=Gene;gene=2SCD60.23c;gene_biotype=protein_coding;gene_synonym=2SCD60.23c;locus_tag=SCO4057
NC_003888.3	RefSeq	CDS	4449455	4450345	.	-	0	ID=cds4010;Parent=gene4090;Dbxref=Genbank:NP_628239.1,GeneID:1099493;Name=NP_628239.1;Note=2SCD60.23c%2C probable transport integral membrane protein%2C len: 296 aa%3B similar to SW:AQP3_HUMAN (EMBL:AB001325) Homo sapiens aquaporin 3 Aqp3%2C 292 aa%3B fasta scores: opt: 571 z-score: 644.7 E(): 2.4e-28%3B 40.4%25 identity in 275 aa overlap. Contains Pfam match to entry PF00230 MIP%2C Major intrinsic protein and match to Prosite entry PS00221 MIP family signature;gbkey=CDS;gene=2SCD60.23c;product=transport integral membrane protein;protein_id=NP_628239.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4449533	4450294	.	-	.	ID=id5070;Dbxref=GeneID:1099493;Note=Pfam match to entry PF00230 MIP%2C Major intrinsic protein%2C score 215.00%2C E-value 2.6e-69;gbkey=misc_feature;gene=2SCD60.23c
NC_003888.3	RefSeq	sequence_feature	4450070	4450096	.	-	.	ID=id5071;Dbxref=GeneID:1099493;Note=PS00221 MIP family signature;gbkey=misc_feature;gene=2SCD60.23c
NC_003888.3	RefSeq	ribosome_entry_site	4450350	4450356	.	-	.	ID=id5072;gbkey=RBS
NC_003888.3	RefSeq	gene	4450575	4451078	.	+	.	ID=gene4091;Dbxref=GeneID:1099494;Name=2SCD60.24;gbkey=Gene;gene=2SCD60.24;gene_biotype=protein_coding;gene_synonym=2SCD60.24;locus_tag=SCO4058
NC_003888.3	RefSeq	CDS	4450575	4451078	.	+	0	ID=cds4011;Parent=gene4091;Dbxref=Genbank:NP_628240.1,GeneID:1099494;Name=NP_628240.1;Note=2SCD60.24%2C unknown%2C len: 167 aa;gbkey=CDS;gene=2SCD60.24;product=hypothetical protein;protein_id=NP_628240.1;transl_table=11
NC_003888.3	RefSeq	gene	4451075	4451410	.	+	.	ID=gene4092;Dbxref=GeneID:1099495;Name=2SCD60.25;gbkey=Gene;gene=2SCD60.25;gene_biotype=protein_coding;gene_synonym=2SCD60.25;locus_tag=SCO4059
NC_003888.3	RefSeq	CDS	4451075	4451410	.	+	0	ID=cds4012;Parent=gene4092;Dbxref=Genbank:NP_628241.1,GeneID:1099495;Name=NP_628241.1;Note=2SCD60.25%2C possible transcriptional regulator%2C len: 111 aa%3B similar to TR:O86818 (EMBL:AL031031) Streptomyces coelicolor  transcriptional regulator SC7C7.13%2C 124 aa%3B fasta scores: opt: 200 z-score: 263.0 E(): 4.4e-07%3B 43.3%25 identity in 97 aa overlap. Contains Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family and possible helix-turn-helix motif at residues 30..51 (+4.25 SD);gbkey=CDS;gene=2SCD60.25;product=transcriptional regulator;protein_id=NP_628241.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4451102	4451335	.	+	.	ID=id5073;Dbxref=GeneID:1099495;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 49.30%2C E-value 8.8e-11;gbkey=misc_feature;gene=2SCD60.25
NC_003888.3	RefSeq	ribosome_entry_site	4451638	4451641	.	+	.	ID=id5074;gbkey=RBS
NC_003888.3	RefSeq	gene	4451653	4452063	.	+	.	ID=gene4093;Dbxref=GeneID:1099496;Name=2SCD60.26;gbkey=Gene;gene=2SCD60.26;gene_biotype=protein_coding;gene_synonym=2SCD60.26;locus_tag=SCO4060
NC_003888.3	RefSeq	CDS	4451653	4452063	.	+	0	ID=cds4013;Parent=gene4093;Dbxref=Genbank:NP_628242.1,GeneID:1099496;Name=NP_628242.1;Note=2SCD60.26%2C unknown%2C len: 136 aa. Contains TTA leucine codon (136)%2C possible target for bldA regulation;gbkey=CDS;gene=2SCD60.26;product=hypothetical protein;protein_id=NP_628242.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4452058	4452060	.	+	.	ID=id5075;Dbxref=GeneID:1099496;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SCD60.26
NC_003888.3	RefSeq	gene	4452173	4452730	.	-	.	ID=gene4094;Dbxref=GeneID:1099497;Name=2SCD60.27c;gbkey=Gene;gene=2SCD60.27c;gene_biotype=protein_coding;gene_synonym=2SCD60.27c;locus_tag=SCO4061
NC_003888.3	RefSeq	CDS	4452173	4452730	.	-	0	ID=cds4014;Parent=gene4094;Dbxref=Genbank:NP_628243.1,GeneID:1099497;Name=NP_628243.1;Note=2SCD60.27c%2C unknown%2C len: 185 aa;gbkey=CDS;gene=2SCD60.27c;product=hypothetical protein;protein_id=NP_628243.1;transl_table=11
NC_003888.3	RefSeq	gene	4452748	4453257	.	+	.	ID=gene4095;Dbxref=GeneID:1099498;Name=2SCD60.28;gbkey=Gene;gene=2SCD60.28;gene_biotype=protein_coding;gene_synonym=2SCD60.28;locus_tag=SCO4062
NC_003888.3	RefSeq	CDS	4452748	4453257	.	+	0	ID=cds4015;Parent=gene4095;Dbxref=Genbank:NP_628244.1,GeneID:1099498;Name=NP_628244.1;Note=2SCD60.28%2C possible transposase%2C len: 169 aa%3B highly similar to N-terminal region of TR:Q9XAG8 (EMBL:AL079356) Streptomyces coelicolor transposase SC6G9.06c%2C 247 aa%3B fasta scores: opt: 880 z-score: 1055.6 E(): 0%3B 88.8%25 identity in 152 aa overlap;gbkey=CDS;gene=2SCD60.28;product=transposase;protein_id=NP_628244.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4453319	4453449	.	+	.	ID=id5076;Note=possible inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4453499	4453855	.	-	.	ID=gene4096;Dbxref=GeneID:1099499;Name=2SCD60.29c;gbkey=Gene;gene=2SCD60.29c;gene_biotype=protein_coding;gene_synonym=2SCD60.29c;locus_tag=SCO4063
NC_003888.3	RefSeq	CDS	4453499	4453855	.	-	0	ID=cds4016;Parent=gene4096;Dbxref=Genbank:NP_628245.1,GeneID:1099499;Name=NP_628245.1;Note=2SCD60.29c%2C possible hypothetical protein%2C len: 118 aa. Contains possible N-terminal region signal peptide sequence. Contains a TTA leucine codon (12)%2C possible target for bldA regulation;gbkey=CDS;gene=2SCD60.29c;product=hypothetical protein;protein_id=NP_628245.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4453820	4453822	.	-	.	ID=id5077;Dbxref=GeneID:1099499;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SCD60.29c
NC_003888.3	RefSeq	gene	4453888	4454151	.	-	.	ID=gene4097;Dbxref=GeneID:1099500;Name=2SCD60.30c;gbkey=Gene;gene=2SCD60.30c;gene_biotype=protein_coding;gene_synonym=2SCD60.30c;locus_tag=SCO4064
NC_003888.3	RefSeq	CDS	4453888	4454151	.	-	0	ID=cds4017;Parent=gene4097;Dbxref=Genbank:NP_628246.1,GeneID:1099500;Name=NP_628246.1;Note=2SCD60.30c%2C unknown%2C len: 87 aa;gbkey=CDS;gene=2SCD60.30c;product=hypothetical protein;protein_id=NP_628246.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4454230	4454353	.	-	.	ID=id5078;Note=possible inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4454564	4455793	.	-	.	ID=gene4098;Dbxref=GeneID:1099501;Name=2SCD60.31c;gbkey=Gene;gene=2SCD60.31c;gene_biotype=protein_coding;gene_synonym=2SCD60.31c,SCD25.01c;locus_tag=SCO4065
NC_003888.3	RefSeq	CDS	4454564	4455793	.	-	0	ID=cds4018;Parent=gene4098;Dbxref=Genbank:NP_733624.1,GeneID:1099501;Name=NP_733624.1;Note=SCD25.01c%2Cpossible transposase%2C partial CDS%2C len: > 150 aa. Similar to many e.g. Methylobacterium sp TR:Q50409 (EMBL%3B X96995) transposase IS1357 (411 aa)%2C fasta scores opt: 239 z-score: 312.5 E(): 4.7e-10 38.2%25 identity in 131 aa overlap.~2SCD60.31c%2C possible regulatory protein (fragment)%2C len: >303 aa%3B similar to C-terminal region of TR:Q9JN56 (EMBL:U08223) Streptomyces fradiae regulation of tylosin production protein TylR%2C 430 aa%3B fasta scores: opt: 228 z-score: 266.0 E(): 3e-07%3B 26.7%25 identity in 288 aa overlap;gbkey=CDS;gene=2SCD60.31c;product=transposase;protein_id=NP_733624.1;transl_table=11
NC_003888.3	RefSeq	gene	4455786	4456859	.	+	.	ID=gene4099;Dbxref=GeneID:1099502;Name=SCD25.02;gbkey=Gene;gene=SCD25.02;gene_biotype=protein_coding;gene_synonym=SCD25.02;locus_tag=SCO4066
NC_003888.3	RefSeq	CDS	4455786	4456859	.	+	0	ID=cds4019;Parent=gene4099;Dbxref=Genbank:NP_628247.1,GeneID:1099502;Name=NP_628247.1;Note=SCD25.02%2C unknown%2C len: 357 aa.;gbkey=CDS;gene=SCD25.02;product=hypothetical protein;protein_id=NP_628247.1;transl_table=11
NC_003888.3	RefSeq	gene	4456865	4456952	.	-	.	ID=gene4100;Dbxref=GeneID:3240041;Name=SCOt38;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt38
NC_003888.3	RefSeq	tRNA	4456865	4456952	.	-	.	ID=rna51;Parent=gene4100;Dbxref=GeneID:3240041;Note=tRNA Ser anticodon GGA%2C Cove score 72.31;gbkey=tRNA;product=tRNA-Ser
NC_003888.3	RefSeq	exon	4456865	4456952	.	-	.	ID=id5079;Parent=rna51;Dbxref=GeneID:3240041;Note=tRNA Ser anticodon GGA%2C Cove score 72.31;gbkey=tRNA;product=tRNA-Ser
NC_003888.3	RefSeq	gene	4457032	4457113	.	+	.	ID=gene4101;Dbxref=GeneID:1099503;Name=srp;gbkey=Gene;gene=srp;gene_biotype=misc_RNA;locus_tag=SCOs03
NC_003888.3	RefSeq	transcript	4457032	4457113	.	+	.	ID=rna52;Parent=gene4101;Dbxref=GeneID:1099503;Note=Signal recognition particle RNA%3B see http://psyche.uthct.edu/dbs/SRPDB/SRPDB.html;gbkey=misc_RNA;gene=srp
NC_003888.3	RefSeq	exon	4457032	4457113	.	+	.	ID=id5080;Parent=rna52;Dbxref=GeneID:1099503;Note=Signal recognition particle RNA%3B see http://psyche.uthct.edu/dbs/SRPDB/SRPDB.html;gbkey=misc_RNA;gene=srp
NC_003888.3	RefSeq	gene	4457168	4459522	.	+	.	ID=gene4102;Dbxref=GeneID:1099504;Name=dnaZ;gbkey=Gene;gene=dnaZ;gene_biotype=protein_coding;gene_synonym=dnaZ;locus_tag=SCO4067
NC_003888.3	RefSeq	CDS	4457168	4459522	.	+	0	ID=cds4020;Parent=gene4102;Dbxref=Genbank:NP_628248.1,GeneID:1099504;Name=NP_628248.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;gene=dnaZ;product=DNA polymerase III subunits gamma and tau;protein_id=NP_628248.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4457300	4457323	.	+	.	ID=id5081;Dbxref=GeneID:1099504;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dnaZ
NC_003888.3	RefSeq	gene	4459642	4460892	.	+	.	ID=gene4103;Dbxref=GeneID:1099505;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;gene_synonym=purD,SCD25.04;locus_tag=SCO4068
NC_003888.3	RefSeq	CDS	4459642	4460892	.	+	0	ID=cds4021;Parent=gene4103;Dbxref=Genbank:NP_628249.1,GeneID:1099505;Name=NP_628249.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;gene=purD;product=phosphoribosylamine--glycine ligase;protein_id=NP_628249.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4459642	4460883	.	+	.	ID=id5082;Dbxref=GeneID:1099505;Note=Pfam match to entry PF01071 GARS%2C Phosphoribosylglycinamide synthetase (GARS)%2C score 697.70%2C E-value 5.5e-206;gbkey=misc_feature;gene=purD
NC_003888.3	RefSeq	sequence_feature	4460470	4460493	.	+	.	ID=id5083;Dbxref=GeneID:1099505;Note=PS00184 Phosphoribosylglycinamide synthetase signature.;gbkey=misc_feature;gene=purD
NC_003888.3	RefSeq	gene	4461199	4463193	.	+	.	ID=gene4104;Dbxref=GeneID:1099506;Name=SCD25.05;gbkey=Gene;gene=SCD25.05;gene_biotype=protein_coding;gene_synonym=SCD25.05;locus_tag=SCO4069
NC_003888.3	RefSeq	CDS	4461199	4463193	.	+	0	ID=cds4022;Parent=gene4104;Dbxref=Genbank:NP_628250.1,GeneID:1099506;Name=NP_628250.1;Note=SCD25.05%2C possible integral membrane protein%2C len: 664 aa. Contains a degenerate direct repeat region: residues 469_ PYADDEA P HAPYADDEA L HVPDADDEA P HAPYAD_502. Also contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCD25.05;product=hypothetical protein;protein_id=NP_628250.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4462602	4462713	.	+	.	ID=id5084;Dbxref=GeneID:1099506;Note=repeat region containing 4x direct repeats;gbkey=repeat_region;gene=SCD25.05
NC_003888.3	RefSeq	gene	4463358	4464875	.	+	.	ID=gene4105;Dbxref=GeneID:1099507;Name=SCD25.06;gbkey=Gene;gene=SCD25.06;gene_biotype=protein_coding;gene_synonym=SCD25.06;locus_tag=SCO4070
NC_003888.3	RefSeq	CDS	4463358	4464875	.	+	0	ID=cds4023;Parent=gene4105;Dbxref=Genbank:NP_628251.1,GeneID:1099507;Name=NP_628251.1;Note=SCD25.06%2C unknown%2C len: 505 aa.;gbkey=CDS;gene=SCD25.06;product=hypothetical protein;protein_id=NP_628251.1;transl_table=11
NC_003888.3	RefSeq	gene	4464986	4465885	.	+	.	ID=gene4106;Dbxref=GeneID:1099508;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;gene_synonym=purC,SCD25.07;locus_tag=SCO4071
NC_003888.3	RefSeq	CDS	4464986	4465885	.	+	0	ID=cds4024;Parent=gene4106;Dbxref=Genbank:NP_628252.1,GeneID:1099508;Name=NP_628252.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;gene=hemH;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=NP_628252.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4465019	4465819	.	+	.	ID=id5085;Dbxref=GeneID:1099508;Note=Pfam match to entry PF01259 SAICAR_synt%2C SAICAR synthetase%2C score 373.00%2C E-value 3.2e-108;gbkey=misc_feature;gene=hemH
NC_003888.3	RefSeq	sequence_feature	4465298	4465342	.	+	.	ID=id5086;Dbxref=GeneID:1099508;Note=PS01057 SAICAR synthetase signature 1.;gbkey=misc_feature;gene=hemH
NC_003888.3	RefSeq	sequence_feature	4465595	4465621	.	+	.	ID=id5087;Dbxref=GeneID:1099508;Note=PS01058 SAICAR synthetase signature 2;gbkey=misc_feature;gene=hemH
NC_003888.3	RefSeq	gene	4465950	4466025	.	-	.	ID=gene4107;Dbxref=GeneID:3240042;Name=SCOt39;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt39
NC_003888.3	RefSeq	tRNA	4465950	4466025	.	-	.	ID=rna53;Parent=gene4107;Dbxref=GeneID:3240042;Note=tRNA Gly anticodon GCC%2C Cove score 89.80;gbkey=tRNA;product=tRNA-Gly
NC_003888.3	RefSeq	exon	4465950	4466025	.	-	.	ID=id5088;Parent=rna53;Dbxref=GeneID:3240042;Note=tRNA Gly anticodon GCC%2C Cove score 89.80;gbkey=tRNA;product=tRNA-Gly
NC_003888.3	RefSeq	gene	4466063	4466665	.	-	.	ID=gene4108;Dbxref=GeneID:1099509;Name=SCD25.08c;gbkey=Gene;gene=SCD25.08c;gene_biotype=protein_coding;gene_synonym=SCD25.08c;locus_tag=SCO4072
NC_003888.3	RefSeq	CDS	4466063	4466665	.	-	0	ID=cds4025;Parent=gene4108;Dbxref=Genbank:NP_628253.1,GeneID:1099509;Name=NP_628253.1;Note=SCD25.08c%2C luxR family two component system response regulator%2C len: 200. Highly similar to many e.g. Bacillus subtilis TR:O34723 (EMBL%3B AF027868)%2C fasta scores opt: 538 z-score: 609.7 E(): 1.3e-26 41.2%25 identity in 199 aa overlap and Streptomyces coelicolor TR:CAB46973 (EMBL%3B AL096825) two-component system response regulator SC6G3.01C (fragment) (202 aa)%2C fasta scores opt: 413 z-score: 356.7 E(): 1.3e-14 38.6%25 identity in 202 aa overlap. Contains a Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and a Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Also contains a possible helix-turn-helix motif between residues 156..177.;gbkey=CDS;gene=SCD25.08c;product=LuxR family transcripitonal regulator;protein_id=NP_628253.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4466066	4466257	.	-	.	ID=id5089;Dbxref=GeneID:1099509;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 53.70%2C E-value 4.1e-12;gbkey=misc_feature;gene=SCD25.08c
NC_003888.3	RefSeq	sequence_feature	4466324	4466665	.	-	.	ID=id5090;Dbxref=GeneID:1099509;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 117.70%2C E-value 2.1e-31;gbkey=misc_feature;gene=SCD25.08c
NC_003888.3	RefSeq	gene	4466674	4467921	.	-	.	ID=gene4109;Dbxref=GeneID:1099510;Name=SCD25.09c;gbkey=Gene;gene=SCD25.09c;gene_biotype=protein_coding;gene_synonym=SCD25.09c;locus_tag=SCO4073
NC_003888.3	RefSeq	CDS	4466674	4467921	.	-	0	ID=cds4026;Parent=gene4109;Dbxref=Genbank:NP_628254.1,GeneID:1099510;Name=NP_628254.1;Note=SCD25.09c%2C possible sensor kinase%2C len: 415 aa. Identical to Streptomyces lividans TR:Q04390 (EMBL:X65556) hypothetical protein in tRNA-glyU beta gene region (fragment) (>64 aa)%2C fasta scores opt: 436 z-score: 463.7 E(): 1.8e-18 100.0%25 identity in 64 aa overlap. Also similar to Streptomyces coelicolor TR:O70000 (EMBL:AL022374) two-component sensor SC5B8.14 (384 aa)%2C fasta scores opt: 303 z-score: 317.3 E(): 2.5e-10 26.8%25 identity in 400 aa overlap. Contains possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCD25.09c;product=sensor kinase;protein_id=NP_628254.1;transl_table=11
NC_003888.3	RefSeq	gene	4467951	4468766	.	-	.	ID=gene4110;Dbxref=GeneID:1099511;Name=SCD25.10c;gbkey=Gene;gene=SCD25.10c;gene_biotype=protein_coding;gene_synonym=SCD25.10c;locus_tag=SCO4074
NC_003888.3	RefSeq	CDS	4467951	4468766	.	-	0	ID=cds4027;Parent=gene4110;Dbxref=Genbank:NP_628255.1,GeneID:1099511;Name=NP_628255.1;Note=SCD25.10c%2C integral membrane protein%2C len: 271 aa. Identical to Streptomyces lividans TR:Q04320 (EMBL%3B X58873) hypothetical 28.3 kd protein in tRNA-glyU beta gene region (271 aa)%2C fasta scores opt: 1693 z-score: 1924.6 E():0 100.0%25 identity in 271 aa overlap and Streptomyces coelicolor TR:CAB50754 (EMBL%3B AL096839) integral membrane transport protein. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCD25.10c;product=hypothetical protein;protein_id=NP_628255.1;transl_table=11
NC_003888.3	RefSeq	gene	4468763	4469743	.	-	.	ID=gene4111;Dbxref=GeneID:1099512;Name=SCD25.11c;gbkey=Gene;gene=SCD25.11c;gene_biotype=protein_coding;gene_synonym=SCD25.11c;locus_tag=SCO4075
NC_003888.3	RefSeq	CDS	4468763	4469743	.	-	0	ID=cds4028;Parent=gene4111;Dbxref=Genbank:NP_628256.1,GeneID:1099512;Name=NP_628256.1;Note=SCD25.11c%2C ABC transporter%2C ATP-binding subunit%2C len: 326 aa. Identical to Streptomyces lividans TR:Q04324 (EMBL%3B X58873) hypothetical 35.0 KD protein in tRNA-glyU beta gene region (326 aa)%2C fasta scores opt: 2092 z-score: 2329.9 E(): 0 100.0%25 identity in 326 aa overlap and Streptomyces coelicolor proteins TR:CAB50753 (EMBL%3B AL096839) ABC transporter%2C ATP-binding subunit SCC22.10 (307 aa)%2C fasta scores opt: 648 z-score: 727.6 E(): 0 42.1%25 identity in 309 aa overlap and TR:CAB42771 (EMBL%3B AL049841) ABC transporter%2C ATP-binding subunit SCI11.08 (315 aa)%2C fasta scores opt: 583 z-score: 447.5 E(): 1.1e-19 41.3%25 identity in 320 aa overlap. Contains a Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C PS00211 ABC transporters family signature and a PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCD25.11c;product=ABC transporter ATP-binding protein;protein_id=NP_628256.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4469108	4469638	.	-	.	ID=id5091;Dbxref=GeneID:1099512;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 169.70%2C E-value 4.9e-47;gbkey=misc_feature;gene=SCD25.11c
NC_003888.3	RefSeq	sequence_feature	4469291	4469335	.	-	.	ID=id5092;Dbxref=GeneID:1099512;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCD25.11c
NC_003888.3	RefSeq	sequence_feature	4469594	4469617	.	-	.	ID=id5093;Dbxref=GeneID:1099512;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD25.11c
NC_003888.3	RefSeq	gene	4469882	4469954	.	-	.	ID=gene4112;Dbxref=GeneID:3240043;Name=SCOt40;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt40
NC_003888.3	RefSeq	tRNA	4469882	4469954	.	-	.	ID=rna54;Parent=gene4112;Dbxref=GeneID:3240043;Note=tRNA Gly anticodon GCC%2C Cove score 84.38;gbkey=tRNA;product=tRNA-Gly
NC_003888.3	RefSeq	exon	4469882	4469954	.	-	.	ID=id5094;Parent=rna54;Dbxref=GeneID:3240043;Note=tRNA Gly anticodon GCC%2C Cove score 84.38;gbkey=tRNA;product=tRNA-Gly
NC_003888.3	RefSeq	gene	4470261	4470578	.	-	.	ID=gene4113;Dbxref=GeneID:1099513;Name=SCD25.12c;gbkey=Gene;gene=SCD25.12c;gene_biotype=protein_coding;gene_synonym=SCD25.12c;locus_tag=SCO4076
NC_003888.3	RefSeq	CDS	4470261	4470578	.	-	0	ID=cds4029;Parent=gene4113;Dbxref=Genbank:NP_628257.1,GeneID:1099513;Name=NP_628257.1;Note=SCD25.12c%2C LSR2-like protein%2C len: 105 aa. Highly similar to Streptomyces coelicolor TR:CAB40875 (EMBL%3B AL049628) LSR2-like protein SCE94.26C (111 aa)%2C fasta scores opt: 335 z-score: 425.4 E(): 2.4e-16 50.5%25 identity in 109 aa overlap and Mycobacterium leprae SW: LSR2_MYCLE (EMBL%3B M67510) LSR2 protein precursor (15 KD antigen) (112 aa)%2C fasta scores opt: 287 z-score: 367.2 E(): 4.2e-13 46.8%25 identity in 111 aa overlap.;gbkey=CDS;gene=SCD25.12c;product=LSR2-like protein;protein_id=NP_628257.1;transl_table=11
NC_003888.3	RefSeq	gene	4470929	4471201	.	+	.	ID=gene4114;Dbxref=GeneID:1099514;Name=SCD25.13;gbkey=Gene;gene=SCD25.13;gene_biotype=protein_coding;gene_synonym=SCD25.13;locus_tag=SCO4077
NC_003888.3	RefSeq	CDS	4470929	4471201	.	+	0	ID=cds4030;Parent=gene4114;Dbxref=Genbank:NP_628258.1,GeneID:1099514;Name=NP_628258.1;Note=With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide%2C ATP%2C and glutamine to formylglycinamidine ribonucleotide%2C ADP%2C and glutamate in the fourth step of the purine biosynthetic pathway;gbkey=CDS;gene=SCD25.13;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=NP_628258.1;transl_table=11
NC_003888.3	RefSeq	gene	4471198	4471878	.	+	.	ID=gene4115;Dbxref=GeneID:1099515;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;gene_synonym=purQ,SCD25.14;locus_tag=SCO4078
NC_003888.3	RefSeq	CDS	4471198	4471878	.	+	0	ID=cds4031;Parent=gene4115;Dbxref=Genbank:NP_628259.1,GeneID:1099515;Name=NP_628259.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;gene=purQ;product=phosphoribosylformylglycinamidine synthase I;protein_id=NP_628259.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4471441	4471476	.	+	.	ID=id5095;Dbxref=GeneID:1099515;Note=PS00442 Glutamine amidotransferases class-I active site;gbkey=misc_feature;gene=purQ
NC_003888.3	RefSeq	gene	4471875	4474133	.	+	.	ID=gene4116;Dbxref=GeneID:1099516;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purL,SCD25.15;locus_tag=SCO4079
NC_003888.3	RefSeq	CDS	4471875	4474133	.	+	0	ID=cds4032;Parent=gene4116;Dbxref=Genbank:NP_628260.1,GeneID:1099516;Name=NP_628260.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;gene=purL;product=phosphoribosylformylglycinamidine synthase II;protein_id=NP_628260.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4472073	4472957	.	+	.	ID=id5096;Dbxref=GeneID:1099516;Note=Pfam match to entry PF00586 AIRS%2C AIR synthase related proteins%2C score 293.60%2C E-value 2.4e-84;gbkey=misc_feature;gene=purL
NC_003888.3	RefSeq	sequence_feature	4473177	4474073	.	+	.	ID=id5097;Dbxref=GeneID:1099516;Note=Pfam match to entry PF00586 AIRS%2C AIR synthase related proteins%2C score 214.30%2C E-value 1.8e-60;gbkey=misc_feature;gene=purL
NC_003888.3	RefSeq	gene	4474193	4474777	.	-	.	ID=gene4117;Dbxref=GeneID:1099517;Name=SCD25.16c;gbkey=Gene;gene=SCD25.16c;gene_biotype=protein_coding;gene_synonym=SCD25.16c;locus_tag=SCO4080
NC_003888.3	RefSeq	CDS	4474193	4474777	.	-	0	ID=cds4033;Parent=gene4117;Dbxref=Genbank:NP_628261.1,GeneID:1099517;Name=NP_628261.1;Note=SCD25.16c%2C unknown%2C len: 194 aa. Shares a low level of similarity with Streptomyces coelicolor TR:CAB44517 (EMBL%3B AL078618) hypothetical 22.4 KD protein SC10A7.07 (199 aa)%2C fasta scores opt: 155 z-score: 201.1 E(): 0.00076 25.9%25 identity in 185 aa overlap. Also similar to TR:Q9L1Y1 (EMBL:AL138662) Streptomyces coelicolor hypothetical protein SC8E4A.24%2C 194 aa%3B fasta scores: opt: 705 Z-score: 859.5 E(): 3e-40%3B 57.576%25 identity in 198 aa overlap;gbkey=CDS;gene=SCD25.16c;product=hypothetical protein;protein_id=NP_628261.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4474782	4474790	.	-	.	ID=id5098;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4474907	4474910	.	+	.	ID=id5099;gbkey=RBS
NC_003888.3	RefSeq	gene	4474926	4475408	.	+	.	ID=gene4118;Dbxref=GeneID:1099518;Name=SCD25.17;gbkey=Gene;gene=SCD25.17;gene_biotype=protein_coding;gene_synonym=SCD25.17;locus_tag=SCO4081
NC_003888.3	RefSeq	CDS	4474926	4475408	.	+	0	ID=cds4034;Parent=gene4118;Dbxref=Genbank:NP_628262.1,GeneID:1099518;Name=NP_628262.1;Note=SCD25.17%2C unknown%2C len: 160 aa.;gbkey=CDS;gene=SCD25.17;product=hypothetical protein;protein_id=NP_628262.1;transl_table=11
NC_003888.3	RefSeq	gene	4475477	4476316	.	+	.	ID=gene4119;Dbxref=GeneID:1099519;Name=SCD25.18;gbkey=Gene;gene=SCD25.18;gene_biotype=protein_coding;gene_synonym=SCD25.18;locus_tag=SCO4082
NC_003888.3	RefSeq	CDS	4475477	4476316	.	+	0	ID=cds4035;Parent=gene4119;Dbxref=Genbank:NP_628263.1,GeneID:1099519;Name=NP_628263.1;Note=SCD25.18%2C possible  peptidase%2C len: 279 aa. Shares a very low level of similarity%2C in parts%2C with two other  Streptomyces coelicolor peptidases: TR:Q9ZBY3 (EMBL%3B AL034355) SCD78.16 (349 aa)%2C fasta scores opt: 199 z-score: 225.8 E(): 3.2e-05 44.3%25 identity in 79 aa overlap and TR:CAB40868 (EMBL%3B AL049628) SCE94.19C (228 aa)%2C fasta scores opt: 191 z-score: 219.8 E(): 6.8e-05 41.7%25 identity in 72 aa overlap. Contains a Pfam match to entry PF01551 Peptidase_M37 and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCD25.18;product=peptidase;protein_id=NP_628263.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4475888	4476223	.	+	.	ID=id5100;Dbxref=GeneID:1099519;Note=Pfam match to entry PF01551 Peptidase_M37%2C %2C score 55.50%2C E-value 1.2e-12;gbkey=misc_feature;gene=SCD25.18
NC_003888.3	RefSeq	gene	4476421	4477734	.	+	.	ID=gene4120;Dbxref=GeneID:1099520;Name=SCD25.19;gbkey=Gene;gene=SCD25.19;gene_biotype=protein_coding;gene_synonym=SCD25.19;locus_tag=SCO4083
NC_003888.3	RefSeq	CDS	4476421	4477734	.	+	0	ID=cds4036;Parent=gene4120;Dbxref=Genbank:NP_628264.1,GeneID:1099520;Name=NP_628264.1;Note=SCD25.19%2C unknown%2C len: 437aa.;gbkey=CDS;gene=SCD25.19;product=hypothetical protein;protein_id=NP_628264.1;transl_table=11
NC_003888.3	RefSeq	gene	4477740	4478348	.	+	.	ID=gene4121;Dbxref=GeneID:1099521;Name=SCD25.20;gbkey=Gene;gene=SCD25.20;gene_biotype=protein_coding;gene_synonym=SCD25.20;locus_tag=SCO4084
NC_003888.3	RefSeq	CDS	4477740	4478348	.	+	0	ID=cds4037;Parent=gene4121;Dbxref=Genbank:NP_628265.1,GeneID:1099521;Name=NP_628265.1;Note=SCD25.20%2C unknown%2C len: 437 aa. Similar in parts to Mycobacterium tuberculosis TR: O06627 (EMBL%3B Z95618) hypothetical 13.5 KD protein MTCY07H7A.02C (129 aa)%2Cfasta scores opt: 333 z-score: 391.1 E(): 2e-14 54.0%25 identity in 100 aa overlap and Mycobacterium leprae TR:O05761 (EMBL%3B Z95151) hypothetical 14.0 KD protein MLCB5.37 (131 aa)%2C fasta scores opt: 328 z-score: 385.3 E(): 4.1e-14 52.5%25 identity in 101 aa overlap.;gbkey=CDS;gene=SCD25.20;product=hypothetical protein;protein_id=NP_628265.1;transl_table=11
NC_003888.3	RefSeq	gene	4478431	4479264	.	+	.	ID=gene4122;Dbxref=GeneID:1099522;Name=SCD25.21;gbkey=Gene;gene=SCD25.21;gene_biotype=protein_coding;gene_synonym=SCD25.21;locus_tag=SCO4085
NC_003888.3	RefSeq	CDS	4478431	4479264	.	+	0	ID=cds4038;Parent=gene4122;Dbxref=Genbank:NP_628266.1,GeneID:1099522;Name=NP_628266.1;Note=SCD25.21%2C lipoprotein%2C len: 202 aa. Contains a possible N-terminal signal sequence and a Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCD25.21;product=lipoprotein;protein_id=NP_628266.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4478479	4478511	.	+	.	ID=id5101;Dbxref=GeneID:1099522;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCD25.21
NC_003888.3	RefSeq	gene	4479261	4480853	.	+	.	ID=gene4123;Dbxref=GeneID:1099523;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;gene_synonym=purF,SCD25.22;locus_tag=SCO4086
NC_003888.3	RefSeq	CDS	4479261	4480853	.	+	0	ID=cds4039;Parent=gene4123;Dbxref=Genbank:NP_628267.1,GeneID:1099523;Name=NP_628267.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=NP_628267.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4479393	4479725	.	+	.	ID=id5102;Dbxref=GeneID:1099523;Note=Pfam match to entry PF00310 GATase_2%2C Glutamine amidotransferases class-II%2C score 109.60%2C E-value 9e-37;gbkey=misc_feature;gene=purF
NC_003888.3	RefSeq	sequence_feature	4479789	4479974	.	+	.	ID=id5103;Dbxref=GeneID:1099523;Note=Pfam match to entry PF00310 GATase_2%2C Glutamine amidotransferases class-II%2C score 59.70%2C E-value 9.8e-20;gbkey=misc_feature;gene=purF
NC_003888.3	RefSeq	sequence_feature	4480443	4480481	.	+	.	ID=id5104;Dbxref=GeneID:1099523;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature.;gbkey=misc_feature;gene=purF
NC_003888.3	RefSeq	gene	4480933	4482000	.	+	.	ID=gene4124;Dbxref=GeneID:1099524;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;gene_synonym=purM,SCD25.23;locus_tag=SCO4087
NC_003888.3	RefSeq	CDS	4480933	4482000	.	+	0	ID=cds4040;Parent=gene4124;Dbxref=Genbank:NP_628268.1,GeneID:1099524;Name=NP_628268.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;gene=purM;product=phosphoribosylaminoimidazole synthetase;protein_id=NP_628268.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4480996	4481949	.	+	.	ID=id5105;Dbxref=GeneID:1099524;Note=Pfam match to entry PF00586 AIRS%2C AIR synthase related proteins%2C score 275.10%2C E-value 9.3e-79;gbkey=misc_feature;gene=purM
NC_003888.3	RefSeq	gene	4482078	4482332	.	-	.	ID=gene4125;Dbxref=GeneID:1099525;Name=SCD25.24c;gbkey=Gene;gene=SCD25.24c;gene_biotype=protein_coding;gene_synonym=SCD25.24c;locus_tag=SCO4088
NC_003888.3	RefSeq	CDS	4482078	4482332	.	-	0	ID=cds4041;Parent=gene4125;Dbxref=Genbank:NP_628269.1,GeneID:1099525;Name=NP_628269.1;Note=SCD25.24c%2C unknown%2C len: 84. Highly similar in N-terminus to Mycobacterium tuberculosis TR: O53824 (EMBL%3B AL022004) hypothetical 6.9 KD protein (60 aa)%2C fasta scores opt: 180 z-score: 231.6 E(): 1.5e-05 51.8%25 identity in 56 aa overlap.;gbkey=CDS;gene=SCD25.24c;product=hypothetical protein;protein_id=NP_628269.1;transl_table=11
NC_003888.3	RefSeq	gene	4482654	4483748	.	-	.	ID=gene4126;Dbxref=GeneID:1099526;Name=SCD25.25c;gbkey=Gene;gene=SCD25.25c;gene_biotype=protein_coding;gene_synonym=SCD25.25c,vdh;locus_tag=SCO4089
NC_003888.3	RefSeq	CDS	4482654	4483748	.	-	0	ID=cds4042;Parent=gene4126;Dbxref=Genbank:NP_628270.1,GeneID:1099526;Name=NP_628270.1;Note=SCD25.25c%2C valine dehydrogenase (EC 1.4.1.-)%2C len: 364 aa. Previously sequenced and characterised Streptomyces coelicolor SW:VDH_STRCO (EMBL%3B L13455) valine dehydrogenase (EC 1.4.1.-) (VALDH). Contains Pfam match to entry PF00208 GLFV_dehydrog%2C Glutamate/Leucine/Phenylalanine/Valine dehydrogenase and a Prosite hit to PS00074 Glu / Leu / Phe;gbkey=CDS;gene=SCD25.25c;product=valine dehydrogenase;protein_id=NP_628270.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4482660	4483670	.	-	.	ID=id5106;Dbxref=GeneID:1099526;Note=Pfam match to entry PF00208 GLFV_dehydrog%2C Glutamate/Leucine/Phenylalanine/Valine dehydrogenase%2C score 480.00%2C E-value 9.6e-142;gbkey=misc_feature;gene=SCD25.25c
NC_003888.3	RefSeq	sequence_feature	4483455	4483496	.	-	.	ID=id5107;Dbxref=GeneID:1099526;Note=PS00074 Glu / Leu / Phe / Val dehydrogenases active site.;gbkey=misc_feature;gene=SCD25.25c
NC_003888.3	RefSeq	gene	4483978	4484829	.	+	.	ID=gene4127;Dbxref=GeneID:1099527;Name=SCD25.26;gbkey=Gene;gene=SCD25.26;gene_biotype=protein_coding;gene_synonym=SCD25.26;locus_tag=SCO4090
NC_003888.3	RefSeq	CDS	4483978	4484829	.	+	0	ID=cds4043;Parent=gene4127;Dbxref=Genbank:NP_628271.1,GeneID:1099527;Name=NP_628271.1;Note=SCD25.26%2C unknown%2C len:283 aa. Previously sequenced Streptomyces coelicolor SW:YVDH_STRCO (EMBL%3B L13455) hypothetical 33.8 KD protein in VDH 3'region Orf1 (303 aa).;gbkey=CDS;gene=SCD25.26;product=hypothetical protein;protein_id=NP_628271.1;transl_table=11
NC_003888.3	RefSeq	gene	4485363	4485569	.	+	.	ID=gene4128;Dbxref=GeneID:1099528;Name=SCD25.27;gbkey=Gene;gene=SCD25.27;gene_biotype=protein_coding;gene_synonym=SCD25.27;locus_tag=SCO4091
NC_003888.3	RefSeq	CDS	4485363	4485569	.	+	0	ID=cds4044;Parent=gene4128;Dbxref=Genbank:NP_628272.1,GeneID:1099528;Name=NP_628272.1;Note=SCD25.27%2C possible DNA-binding protein%2C len: 68 aa. Contains a possible helix-turn-helix motif between residues 13..34 score +3.25 SD.;gbkey=CDS;gene=SCD25.27;product=DNA-binding protein;protein_id=NP_628272.1;transl_table=11
NC_003888.3	RefSeq	gene	4486471	4486545	.	-	.	ID=gene4129;Dbxref=GeneID:3240044;Name=SCOt41;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt41
NC_003888.3	RefSeq	tRNA	4486471	4486545	.	-	.	ID=rna55;Parent=gene4129;Dbxref=GeneID:3240044;Note=tRNA Asp anticodon GTC%2C Cove score 68.25;gbkey=tRNA;product=tRNA-Asp
NC_003888.3	RefSeq	exon	4486471	4486545	.	-	.	ID=id5108;Parent=rna55;Dbxref=GeneID:3240044;Note=tRNA Asp anticodon GTC%2C Cove score 68.25;gbkey=tRNA;product=tRNA-Asp
NC_003888.3	RefSeq	gene	4486639	4490622	.	-	.	ID=gene4130;Dbxref=GeneID:1099529;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;gene_synonym=hrpA;locus_tag=SCO4092
NC_003888.3	RefSeq	CDS	4486639	4490622	.	-	0	ID=cds4045;Parent=gene4130;Dbxref=Genbank:NP_628273.1,GeneID:1099529;Name=NP_628273.1;Note=SCD25.28c%2C ATP-dependent helicase%2C len: 1327 aa. Highly similar to Escherichia coli SW:HRPA_ECOLI (EMBL%3B D42105) ATP-dependent helicase (1281 aa)%2C fasta scores opt: 1818 z-score: 1967.4 E(): 0 61.9%25 identity in 1306 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=hrpA;product=ATP-dependent helicase;protein_id=NP_628273.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4490302	4490325	.	-	.	ID=id5109;Dbxref=GeneID:1099529;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hrpA
NC_003888.3	RefSeq	gene	4490732	4490805	.	-	.	ID=gene4131;Dbxref=GeneID:3240045;Name=SCOt42;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt42
NC_003888.3	RefSeq	tRNA	4490732	4490805	.	-	.	ID=rna56;Parent=gene4131;Dbxref=GeneID:3240045;Note=tRNA Phe anticodon GAA%2C Cove score 78.93;gbkey=tRNA;product=tRNA-Phe
NC_003888.3	RefSeq	exon	4490732	4490805	.	-	.	ID=id5110;Parent=rna56;Dbxref=GeneID:3240045;Note=tRNA Phe anticodon GAA%2C Cove score 78.93;gbkey=tRNA;product=tRNA-Phe
NC_003888.3	RefSeq	gene	4490830	4490904	.	-	.	ID=gene4132;Dbxref=GeneID:3240046;Name=SCOt43;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt43
NC_003888.3	RefSeq	tRNA	4490830	4490904	.	-	.	ID=rna57;Parent=gene4132;Dbxref=GeneID:3240046;Note=tRNA Asp anticodon GTC%2C Cove score 68.25;gbkey=tRNA;product=tRNA-Asp
NC_003888.3	RefSeq	exon	4490830	4490904	.	-	.	ID=id5111;Parent=rna57;Dbxref=GeneID:3240046;Note=tRNA Asp anticodon GTC%2C Cove score 68.25;gbkey=tRNA;product=tRNA-Asp
NC_003888.3	RefSeq	gene	4490939	4491011	.	-	.	ID=gene4133;Dbxref=GeneID:3240047;Name=SCOt44;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt44
NC_003888.3	RefSeq	tRNA	4490939	4491011	.	-	.	ID=rna58;Parent=gene4133;Dbxref=GeneID:3240047;Note=tRNA Glu anticodon TTC%2C Cove score 63.59;gbkey=tRNA;product=tRNA-Glu
NC_003888.3	RefSeq	exon	4490939	4491011	.	-	.	ID=id5112;Parent=rna58;Dbxref=GeneID:3240047;Note=tRNA Glu anticodon TTC%2C Cove score 63.59;gbkey=tRNA;product=tRNA-Glu
NC_003888.3	RefSeq	gene	4491092	4492711	.	-	.	ID=gene4134;Dbxref=GeneID:1099530;Name=SCD25.29c;gbkey=Gene;gene=SCD25.29c;gene_biotype=protein_coding;gene_synonym=SCD25.29c;locus_tag=SCO4093
NC_003888.3	RefSeq	CDS	4491092	4492711	.	-	0	ID=cds4046;Parent=gene4134;Dbxref=Genbank:NP_628274.1,GeneID:1099530;Name=NP_628274.1;Note=SCD25.29c%2C possible integral membrane protein%2C len: 539 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCD25.29c;product=hypothetical protein;protein_id=NP_628274.1;transl_table=11
NC_003888.3	RefSeq	gene	4492828	4493178	.	+	.	ID=gene4135;Dbxref=GeneID:1099531;Name=SCD25.30;gbkey=Gene;gene=SCD25.30;gene_biotype=protein_coding;gene_synonym=SCD25.30;locus_tag=SCO4094
NC_003888.3	RefSeq	CDS	4492828	4493178	.	+	0	ID=cds4047;Parent=gene4135;Dbxref=Genbank:NP_628275.1,GeneID:1099531;Name=NP_628275.1;Note=SCD25.30%2C unknown%2C len: 116 aa. Highly similar to Mycobacterium tuberculosis TR:P96242 (EMBL%3B Z83864) hypothetical 15.0 KD protein (137 aa)%2C fasta scores opt: 395 z-score: 500.7 E(): 1.5e-20 54.4%25 identity in 114 aa overlap. Contains a Prosite hit to PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;gbkey=CDS;gene=SCD25.30;product=hypothetical protein;protein_id=NP_628275.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4493107	4493136	.	+	.	ID=id5113;Dbxref=GeneID:1099531;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SCD25.30
NC_003888.3	RefSeq	ribosome_entry_site	4493261	4493267	.	+	.	ID=id5114;gbkey=RBS
NC_003888.3	RefSeq	gene	4493275	4493832	.	+	.	ID=gene4136;Dbxref=GeneID:1099532;Name=SCD25.31;gbkey=Gene;gene=SCD25.31;gene_biotype=protein_coding;gene_synonym=SCD25.31;locus_tag=SCO4095
NC_003888.3	RefSeq	CDS	4493275	4493832	.	+	0	ID=cds4048;Parent=gene4136;Dbxref=Genbank:NP_628276.1,GeneID:1099532;Name=NP_628276.1;Note=SCD25.31%2C possible lipoprotein%2C len: 185 aa. Contains a possible N-terminal signal sequence and a Prosite hit to a PS00013 Prokaryotic membrane lipoprotein lipid attachment site. The protein product is also predicted to be rich in Pro/Ala/Gly.;gbkey=CDS;gene=SCD25.31;product=lipoprotein;protein_id=NP_628276.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4493311	4493343	.	+	.	ID=id5115;Dbxref=GeneID:1099532;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCD25.31
NC_003888.3	RefSeq	ribosome_entry_site	4494121	4494124	.	+	.	ID=id5116;gbkey=RBS
NC_003888.3	RefSeq	gene	4494136	4496358	.	+	.	ID=gene4137;Dbxref=GeneID:1099533;Name=SCD25.32;gbkey=Gene;gene=SCD25.32;gene_biotype=protein_coding;gene_synonym=SCD25.32;locus_tag=SCO4096
NC_003888.3	RefSeq	CDS	4494136	4496358	.	+	0	ID=cds4049;Parent=gene4137;Dbxref=Genbank:NP_628277.1,GeneID:1099533;Name=NP_628277.1;Note=SCD25.32%2C ATP-dependent RNA helicase%2C 839 aa. Highly similar to many including: Streptomyces coelicolor TR:O54116 (EMBL%3B AL021529) DEAD-box RNA helicase SC10A5.25C (498 aa)%2C fasta scores opt: 1467 z-score: 1347.1 E(): 0 50.0%25 identity in 486 aa overlap. Contains Pfam matches to entry PF00270 DEAD%2C DEAD/DEAH box helicase and Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C as well as a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a degenerate direct repeat region: containing several different repeats: 6.5x RRDDRGDRGGRSF(D/E) 2x RRDDRRDDRGGRSFE 2x RRDDRGGF and a probable coiled-coil from 444 to 501 (58 residues).;gbkey=CDS;gene=SCD25.32;product=ATP-dependent RNA helicase;protein_id=NP_628277.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4494355	4494936	.	+	.	ID=id5117;Dbxref=GeneID:1099533;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 185.80%2C E-value 7.7e-58;gbkey=misc_feature;gene=SCD25.32
NC_003888.3	RefSeq	sequence_feature	4494448	4494471	.	+	.	ID=id5118;Dbxref=GeneID:1099533;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SCD25.32
NC_003888.3	RefSeq	sequence_feature	4495075	4495320	.	+	.	ID=id5119;Dbxref=GeneID:1099533;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 109.40%2C E-value 6.7e-29;gbkey=misc_feature;gene=SCD25.32
NC_003888.3	RefSeq	repeat_region	4495773	4496190	.	+	.	ID=id5120;Dbxref=GeneID:1099533;Note=a degenerate direct repeat region containing repeats of approximately 39 bp in length.;gbkey=repeat_region;gene=SCD25.32
NC_003888.3	RefSeq	stem_loop	4496375	4496409	.	+	.	ID=id5121;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4496497	4498032	.	+	.	ID=gene4138;Dbxref=GeneID:1099534;Name=SCD17.01;gbkey=Gene;gene=SCD17.01;gene_biotype=protein_coding;gene_synonym=SCD17.01,SCD25.33;locus_tag=SCO4097
NC_003888.3	RefSeq	CDS	4496497	4498032	.	+	0	ID=cds4050;Parent=gene4138;Dbxref=Genbank:NP_733625.1,GeneID:1099534;Name=NP_733625.1;Note=SCD17.01%2C possible amino acid/metabolite permease%2C partial CDS%2C len: >389 aa. Similar to many Eukaryotic permeases e.g. Arabidopsis thaliana TR: O22509 (EMBL%3B AF019637) amino acid or GABA permease (516 aa)%2C fasta scores opt: 827 z-score: 942.8 E(): 0 41.8%25 identity in 385 aa overlap as well as Escherichia coli SW:YEEF_ECOLI (EMBL%3B U00009) hypothetical 49.8 KD transport protein in sbcB-hisL intergenic region (454 aa)%2C fasta scores opt: 256 z-score: 295.7 E(): 4.1e-09 24.6%25 identity in 293 aa overlap. Contains a Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and multiple possible membrane spanning hydrophobic domains. The 5' region of this CDS is located on cosmid SCD25.~SCD25.33%2C possible integral membrane protein%2C partial CDS%2C len: 156 aa. High level of similarity with Eukaryotic permeases e.g. Arabidopsis thaliana TR:O22509 (EMBL%3B AF019637) amino acid or GABA permease (516 aa)%2C fasta scores opt: 470 z-score: 557.7 E(): 1e-23 53.1%25 identity in 128 aa overlap and Bacillus subtilis TR:O07576 (EMBL%3B Y14082) hypothetical 49.7 KD protein (456 aa)%2C fasta scores opt: 128 z-score: 158.4 E(): 0.18 23.3%25 identity in 133 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SCD17.01;product=amino acid/metabolite permease;protein_id=NP_733625.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4496869	4497945	.	+	.	ID=id5122;Dbxref=GeneID:1099534;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -250.70%2C E-value 0.0022;gbkey=misc_feature;gene=SCD17.01
NC_003888.3	RefSeq	gene	4498149	4498221	.	+	.	ID=gene4139;Dbxref=GeneID:3240048;Name=SCOt45;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt45
NC_003888.3	RefSeq	tRNA	4498149	4498221	.	+	.	ID=rna59;Parent=gene4139;Dbxref=GeneID:3240048;Note=tRNA Lys anticodon TTT%2C Cove score 82.40;gbkey=tRNA;product=tRNA-Lys
NC_003888.3	RefSeq	exon	4498149	4498221	.	+	.	ID=id5123;Parent=rna59;Dbxref=GeneID:3240048;Note=tRNA Lys anticodon TTT%2C Cove score 82.40;gbkey=tRNA;product=tRNA-Lys
NC_003888.3	RefSeq	gene	4498219	4498869	.	-	.	ID=gene4140;Dbxref=GeneID:1099535;Name=SCD17.02c;gbkey=Gene;gene=SCD17.02c;gene_biotype=protein_coding;gene_synonym=SCD17.02c;locus_tag=SCO4098
NC_003888.3	RefSeq	CDS	4498219	4498869	.	-	0	ID=cds4051;Parent=gene4140;Dbxref=Genbank:NP_628278.1,GeneID:1099535;Name=NP_628278.1;Note=SCD17.02c%2C probable acetyltransferase%2C len: 216 aa. Highly similar to many acetyltransferases involved in antibiotic resistance e.g. Enterococcus faecium SW:SATA_ENTFC (EMBL%3B L12033) streptogramin A acetyltransferase (EC 2.3.1.-) (209 aa)%2C fasta scores opt: 610 z-score: 726.5 E(): 0 46.0%25 identity in 189 aa overlap and Enterococcus faecium TR:AAD44719 (EMBL%3B AF139725) SatG protein (214 aa)%2C fasta scores opt: 665 z-score: 790.9 E(): 0 53.7%25 identity in 188 aa overlap. It is also highly similar to Streptomyces coelicolor SC5G9.03c (217 aa)%2C fasta scores opt: 868 z-score: 924.4 E():0 62.0%25 identity in 205 aa overlap. Contains a Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats).;gbkey=CDS;gene=SCD17.02c;product=acetyltransferase;protein_id=NP_628278.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4498450	4498554	.	-	.	ID=id5124;Dbxref=GeneID:1099535;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 45.40%2C E-value 4.7e-11;gbkey=misc_feature;gene=SCD17.02c
NC_003888.3	RefSeq	gene	4499009	4499689	.	+	.	ID=gene4141;Dbxref=GeneID:1099536;Name=SCD17.03;gbkey=Gene;gene=SCD17.03;gene_biotype=protein_coding;gene_synonym=SCD17.03;locus_tag=SCO4099
NC_003888.3	RefSeq	CDS	4499009	4499689	.	+	0	ID=cds4052;Parent=gene4141;Dbxref=Genbank:NP_628279.1,GeneID:1099536;Name=NP_628279.1;Note=SCD17.03%2C probable tetR family transcriptional regulator%2C len: 216 aa. Similar to many e.g. Propionibacterium freudenreichii TR:P72185 (EMBL:U51164) repressor protein (HemR) (259 aa)%2C fasta scores opt: 250 z-score: 297.6 E(): 3.2e-09 36.7%25 identity in 147 aa overlap. Also similar to several Streptomyces coelicolor regulators e.g. TR:O54180 (EMBL:AL021411) SC7H1.21 (203 aa)%2C fasta scores opt: 330 z-score: 391.0 E(): 2e-14 40.0%25 identity in 220 aa overlap and SC5G9.05 (193 aa)%2C fasta scores opt: 292 z-score: 269.9 E(): 9.2e-10 40.9%25 identity in 149 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a probable helix-turn-helix motif between residues 47..68 (+3.70 SD).;gbkey=CDS;gene=SCD17.03;product=tetR family transcriptional regulator;protein_id=NP_628279.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4499096	4499200	.	+	.	ID=id5125;Dbxref=GeneID:1099536;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 16.70%2C E-value 0.0067;gbkey=misc_feature;gene=SCD17.03
NC_003888.3	RefSeq	gene	4499727	4500119	.	+	.	ID=gene4142;Dbxref=GeneID:1099537;Name=SCD17.04;gbkey=Gene;gene=SCD17.04;gene_biotype=protein_coding;gene_synonym=SCD17.04;locus_tag=SCO4100
NC_003888.3	RefSeq	CDS	4499727	4500119	.	+	0	ID=cds4053;Parent=gene4142;Dbxref=Genbank:NP_628280.1,GeneID:1099537;Name=NP_628280.1;Note=SCD17.04%2C unknown%2C len: 130 aa.;gbkey=CDS;gene=SCD17.04;product=hypothetical protein;protein_id=NP_628280.1;transl_table=11
NC_003888.3	RefSeq	gene	4500126	4500524	.	+	.	ID=gene4143;Dbxref=GeneID:1099538;Name=SCD17.05;gbkey=Gene;gene=SCD17.05;gene_biotype=protein_coding;gene_synonym=SCD17.05;locus_tag=SCO4101
NC_003888.3	RefSeq	CDS	4500126	4500524	.	+	0	ID=cds4054;Parent=gene4143;Dbxref=Genbank:NP_628281.1,GeneID:1099538;Name=NP_628281.1;Note=SCD17.05%2C possible hypothetical protein%2C len: 130 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCD17.05;product=hypothetical protein;protein_id=NP_628281.1;transl_table=11
NC_003888.3	RefSeq	gene	4500505	4501464	.	-	.	ID=gene4144;Dbxref=GeneID:1099539;Name=SCD17.06c;gbkey=Gene;gene=SCD17.06c;gene_biotype=protein_coding;gene_synonym=SCD17.06c;locus_tag=SCO4102
NC_003888.3	RefSeq	CDS	4500505	4501464	.	-	0	ID=cds4055;Parent=gene4144;Dbxref=Genbank:NP_628282.1,GeneID:1099539;Name=NP_628282.1;Note=SCD17.06c%2C possible MerR family transcriptional regulator%2C len:319 aa. Similar to many other MerR family regulators e.g. Bradyrhizobium sp. (strain NC92) SW:NOLA_BRASN (EMBL%3B U33192) nodulation protein NolA (237 aa)%2C fasta scores opt: 251 z-score: 286.3 E(): 1.4e-08 28.9%25 identity in 225 aa overlap. Contains a Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and a probable helix-turn-helix motif between residues 9..30 (+3.43 SD).;gbkey=CDS;gene=SCD17.06c;product=MerR family transcriptional regulator;protein_id=NP_628282.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4501327	4501434	.	-	.	ID=id5126;Dbxref=GeneID:1099539;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 57.20%2C E-value 3.6e-13;gbkey=misc_feature;gene=SCD17.06c
NC_003888.3	RefSeq	gene	4501524	4502795	.	-	.	ID=gene4145;Dbxref=GeneID:1099540;Name=SCD17.07c;gbkey=Gene;gene=SCD17.07c;gene_biotype=protein_coding;gene_synonym=SCD17.07c;locus_tag=SCO4103
NC_003888.3	RefSeq	CDS	4501524	4502795	.	-	0	ID=cds4056;Parent=gene4145;Dbxref=Genbank:NP_628283.1,GeneID:1099540;Name=NP_628283.1;Note=SCD17.07c. probable peptidase%2C len : 423 aa. Similar to many e.g. Sulfolobus solfataricus SW:CBPX_SULSO (EMBL%3B Z48497) thermostable carboxypeptidase (EC 3.4.17.-) (393 aa)%2C fasta scores opt: 623 z-score: 708.6 E(): 4.1e-32 34.0%25 identity in 400 aa overlap. Contains a Pfam match to entry PF01546 Peptidase_M20.;gbkey=CDS;gene=SCD17.07c;product=peptidase;protein_id=NP_628283.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4501764	4502729	.	-	.	ID=id5127;Dbxref=GeneID:1099540;Note=Pfam match to entry PF01546 Peptidase_M20%2C %2C score -29.20%2C E-value 0.0019;gbkey=misc_feature;gene=SCD17.07c
NC_003888.3	RefSeq	gene	4502820	4503476	.	-	.	ID=gene4146;Dbxref=GeneID:1099541;Name=SCD17.08c;gbkey=Gene;gene=SCD17.08c;gene_biotype=protein_coding;gene_synonym=SCD17.08c;locus_tag=SCO4104
NC_003888.3	RefSeq	CDS	4502820	4503476	.	-	0	ID=cds4057;Parent=gene4146;Dbxref=Genbank:NP_628284.1,GeneID:1099541;Name=NP_628284.1;Note=SCD17.08c%2C possible integral membrane protein%2C len: 218 aa. Similar to several hypothetical membrane proteins e.g. Streptomyces coelicolor TR:O86576 (EMBL%3B AL031184) integral membrane protein SC2A11.15 (219 aa)%2C fasta scores opt: 503 z-score: 576.2 E(): 9.7e-25 41.6%25 identity in 209 aa overlap. Contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SCD17.08c;product=hypothetical protein;protein_id=NP_628284.1;transl_table=11
NC_003888.3	RefSeq	gene	4503887	4504207	.	+	.	ID=gene4147;Dbxref=GeneID:1099542;Name=SCD17.09;gbkey=Gene;gene=SCD17.09;gene_biotype=protein_coding;gene_synonym=SCD17.09;locus_tag=SCO4105
NC_003888.3	RefSeq	CDS	4503887	4504207	.	+	0	ID=cds4058;Parent=gene4147;Dbxref=Genbank:NP_628285.1,GeneID:1099542;Name=NP_628285.1;Note=SCD17.09%2C unknown%2C len: 106 aa. Highly similar to Streptomyces coelicolor TR:CAB40321 (EMBL%3B AL049573) hypothetical 10.8 KD protein SCE39.13C (99 aa)%2C fasta scores opt: 192 z-score: 253.4 E(): 9.3e-07 43.0%25 identity in 100 aa overlap.;gbkey=CDS;gene=SCD17.09;product=hypothetical protein;protein_id=NP_628285.1;transl_table=11
NC_003888.3	RefSeq	gene	4504259	4505389	.	+	.	ID=gene4148;Dbxref=GeneID:1099543;Name=SCD17.10;gbkey=Gene;gene=SCD17.10;gene_biotype=protein_coding;gene_synonym=SCD17.10;locus_tag=SCO4106
NC_003888.3	RefSeq	CDS	4504259	4505389	.	+	0	ID=cds4059;Parent=gene4148;Dbxref=Genbank:NP_628286.1,GeneID:1099543;Name=NP_628286.1;Note=SCD17.10%2C possible bifunctional enzyme deaminase/reductase%2C len: 376 aa. Similar to both domains of the Escherichia coli bifunctional SW:RIBD_ECOLI (EMBL%3B X64395) riboflavin biosynthesis protein RibD (367 aa). However the N-terminal domain of SCD17.10 is similar to the E. coli C-terminal reductase domain%2C fasta scores opt: 209 z-score: 241.1 E(): 4.5e-06 27.0%25 identity in 222 aa overlap and the C-terminal domain of SCD17.10 is similar to the E. coli N-terminal deaminase domain (blast scores Expect %3D 3.2e-07%2C P %3D 3.2e-07%2C Identities %3D 51/192 (26%25)%2C Positives %3D 77/192 (40%25)). Also similar to other%2C hypothetical%2C deaminases e.g. Archaeoglobus fulgidus TR:O28272 riboflavin-specific deaminase (RibG) (219 aa)%2C fasta scores opt: 410 z-score: 471.2 E(): 6.8e-19 38.0%25 identity in 205 aa overlap.;gbkey=CDS;gene=SCD17.10;product=bifunctional enzyme deaminase/reductase;protein_id=NP_628286.1;transl_table=11
NC_003888.3	RefSeq	gene	4505460	4505533	.	+	.	ID=gene4149;Dbxref=GeneID:3240049;Name=SCOt46;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt46
NC_003888.3	RefSeq	tRNA	4505460	4505533	.	+	.	ID=rna60;Parent=gene4149;Dbxref=GeneID:3240049;Note=tRNA Met anticodon CAT%2C Cove score 71.40;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	exon	4505460	4505533	.	+	.	ID=id5128;Parent=rna60;Dbxref=GeneID:3240049;Note=tRNA Met anticodon CAT%2C Cove score 71.40;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	gene	4505576	4506940	.	+	.	ID=gene4150;Dbxref=GeneID:1099544;Name=SCD17.11;gbkey=Gene;gene=SCD17.11;gene_biotype=protein_coding;gene_synonym=SCD17.11;locus_tag=SCO4107
NC_003888.3	RefSeq	CDS	4505576	4506940	.	+	0	ID=cds4060;Parent=gene4150;Dbxref=Genbank:NP_628287.1,GeneID:1099544;Name=NP_628287.1;Note=SCD17.11%2C possible integral membrane protein%2C len: 454 aa. Similar to many e.g. Streptomyces coelicolor TR:O69922 (EMBL%3B AL023861) integral membrane protein SC3C8.09 (367 aa)%2C fasta scores opt: 687 z-score: 689.9 E(): 4.5e-31 37.2%25 identity in 368 aa overlap. Contains possible membrane spanning hydrophobic domains. Contains probable coiled coil between residues 270..307 (probability 0.85).;gbkey=CDS;gene=SCD17.11;product=hypothetical protein;protein_id=NP_628287.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4507317	4507323	.	+	.	ID=id5129;gbkey=RBS
NC_003888.3	RefSeq	gene	4507333	4508376	.	+	.	ID=gene4151;Dbxref=GeneID:1099545;Name=SCD17.12;gbkey=Gene;gene=SCD17.12;gene_biotype=protein_coding;gene_synonym=SCD17.12;locus_tag=SCO4108
NC_003888.3	RefSeq	CDS	4507333	4508376	.	+	0	ID=cds4061;Parent=gene4151;Dbxref=Genbank:NP_628288.1,GeneID:1099545;Name=NP_628288.1;Note=SCD17.12%2C probable peptidase%2C len: 347 aa. Similar to several Streptomyces coelicolor peptidases e.g. TR:CAB39706 (EMBL%3B AL049485) SC6A5.22 (312 aa)%2C fasta scores opt: 570 z-score: 526.9 E(): 5.4e-22 37.1%25 identity in 315 aa overlap and TR:CAB40868 (EMBL%3B AL049628) SCE94.19C (228 aa)%2C fasta scores opt: 460 z-score: 429.8 E(): 1.4e-16 40.1%25 identity in 217 aa overlap. Contains a Pfam match to entry PF01551 Peptidase_M37%2C an alanine rich region between residues 163..207 and a probable coiled coil between residues 149..219 (probability 1.00).;gbkey=CDS;gene=SCD17.12;product=peptidase;protein_id=NP_628288.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4508098	4508349	.	+	.	ID=id5130;Dbxref=GeneID:1099545;Note=Pfam match to entry PF01551 Peptidase_M37%2C %2C score 95.60%2C E-value 9.9e-25;gbkey=misc_feature;gene=SCD17.12
NC_003888.3	RefSeq	gene	4508515	4509459	.	+	.	ID=gene4152;Dbxref=GeneID:1099546;Name=SCD17.13;gbkey=Gene;gene=SCD17.13;gene_biotype=protein_coding;gene_synonym=SCD17.13,SCD17A.01;locus_tag=SCO4109
NC_003888.3	RefSeq	CDS	4508515	4509459	.	+	0	ID=cds4062;Parent=gene4152;Dbxref=Genbank:NP_733626.1,GeneID:1099546;Name=NP_733626.1;Note=SCD17.13%2C possible oxidoreductase%2C partial CDS%2C len: >136 aa. Similar to several including: Streptomyces fradiae TR:AAD41821 (EMBL%3B AF147704) NDP-Hexose 2%2C3-Enoyl reductase TYLCII (329 aa)%2C fasta scores opt: 251 z-score: 325.2 E(): 9.3e-11 41.9%25 identity in 124 aa overlap and Saccharopolyspora erythraea (Streptomyces erythraeus) TR:O33936 (EMBL%3B U77454)EryBII (333 aa)%2C fasta scores opt: 245 z-score: 317.5 E(): 2.5e-10 39.3%25 identity in 135 aa overlap.~SCD17A.01%2C possible oxidoreductase (fragment)%2C len: >218 aa%3B similar to TR:Q9RJC4 (EMBL:AL133171) Streptomyces coelicolor aldo/keto reductase (fragment) SCF81.28c%2C >307 aa%3B fasta scores: opt: 445 z-score: 528.2 E(): 6.5e-22%3B 39.7%25 identity in 219 aa overlap. Contains 2x Pfam matches to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family;gbkey=CDS;gene=SCD17.13;product=oxidoreductase;protein_id=NP_733626.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4508818	4508970	.	+	.	ID=id5131;Dbxref=GeneID:1099546;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 15.60%2C E-value 0.002;gbkey=misc_feature;gene=SCD17.13
NC_003888.3	RefSeq	sequence_feature	4509274	4509324	.	+	.	ID=id5132;Dbxref=GeneID:1099546;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 0.10%2C E-value 50;gbkey=misc_feature;gene=SCD17.13
NC_003888.3	RefSeq	gene	4509484	4510875	.	-	.	ID=gene4153;Dbxref=GeneID:1099547;Name=SCD17A.02c;gbkey=Gene;gene=SCD17A.02c;gene_biotype=protein_coding;gene_synonym=SCD17A.02c;locus_tag=SCO4110
NC_003888.3	RefSeq	CDS	4509484	4510875	.	-	0	ID=cds4063;Parent=gene4153;Dbxref=Genbank:NP_628289.1,GeneID:1099547;Name=NP_628289.1;Note=SCD17A.02c%2C possible integral membrane protein%2C len: 463 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD17A.02c;product=hypothetical protein;protein_id=NP_628289.1;transl_table=11
NC_003888.3	RefSeq	gene	4510885	4511700	.	-	.	ID=gene4154;Dbxref=GeneID:1099548;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=SCD17A.03c;locus_tag=SCO4111
NC_003888.3	RefSeq	CDS	4510885	4511700	.	-	0	ID=cds4064;Parent=gene4154;Dbxref=Genbank:NP_628290.1,GeneID:1099548;Name=NP_628290.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=NP_628290.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4511804	4511807	.	+	.	ID=id5133;gbkey=RBS
NC_003888.3	RefSeq	gene	4511815	4512225	.	+	.	ID=gene4155;Dbxref=GeneID:1099549;Name=SCD17A.04;gbkey=Gene;gene=SCD17A.04;gene_biotype=protein_coding;gene_synonym=SCD17A.04;locus_tag=SCO4112
NC_003888.3	RefSeq	CDS	4511815	4512225	.	+	0	ID=cds4065;Parent=gene4155;Dbxref=Genbank:NP_628291.1,GeneID:1099549;Name=NP_628291.1;Note=SCD17A.04%2C unknown%2C len: 136 aa;gbkey=CDS;gene=SCD17A.04;product=hypothetical protein;protein_id=NP_628291.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	4512213	4512322	.	+	.	ID=id5134;Note=possible stem loop. Score 68: 32/36 (88%25) matches%2C 1 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4512311	4513591	.	-	.	ID=gene4156;Dbxref=GeneID:1099550;Name=SCD17A.05c;gbkey=Gene;gene=SCD17A.05c;gene_biotype=protein_coding;gene_synonym=SCD17A.05c;locus_tag=SCO4113
NC_003888.3	RefSeq	CDS	4512311	4513591	.	-	0	ID=cds4066;Parent=gene4156;Dbxref=Genbank:NP_628292.1,GeneID:1099550;Name=NP_628292.1;Note=catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate;gbkey=CDS;gene=SCD17A.05c;product=hydroxyglutarate oxidase;protein_id=NP_628292.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4513592	4513595	.	-	.	ID=id5135;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	4513606	4515345	.	-	.	ID=id5136;Note=previously sequenced DNA fragment. EMBL:M80614 Streptomyces coelicolor sporulation-associated protein genes%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4513662	4515083	.	-	.	ID=gene4157;Dbxref=GeneID:1099551;Name=SCD17A.06c;gbkey=Gene;gene=SCD17A.06c;gene_biotype=protein_coding;gene_synonym=SCD17A.06c;locus_tag=SCO4114
NC_003888.3	RefSeq	CDS	4513662	4515083	.	-	0	ID=cds4067;Parent=gene4157;Dbxref=Genbank:NP_628293.1,GeneID:1099551;Name=NP_628293.1;Note=SCD17A.06c%2C sporulation associated protein%2C len: 473 aa%3B identical to previously sequenced TR:Q53958 (EMBL:M80614) Streptomyces coelicolor sporulation associated protein%2C 473 aa and similar to TR:Q9S2P4 (EMBL:AL096872) Streptomyces coelicolor regulator SC5F7.09c%2C 487 aa%3B fasta scores: opt: 728 z-score: 658.8 E(): 4.7e-31%3B 39.7%25 identity in 489 aa overlap. Contains a possible cleavable N-terminal region signal peptide sequence and a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCD17A.06c;product=sporulation associated protein;protein_id=NP_628293.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4514463	4514465	.	-	.	ID=id5137;Dbxref=GeneID:1099551;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD17A.06c
NC_003888.3	RefSeq	ribosome_entry_site	4515786	4515790	.	+	.	ID=id5138;gbkey=RBS
NC_003888.3	RefSeq	gene	4515796	4517919	.	+	.	ID=gene4158;Dbxref=GeneID:1099552;Name=SCD17A.07;gbkey=Gene;gene=SCD17A.07;gene_biotype=protein_coding;gene_synonym=SCD17A.07,SCD72A.01;locus_tag=SCO4115
NC_003888.3	RefSeq	CDS	4515796	4517919	.	+	0	ID=cds4068;Parent=gene4158;Dbxref=Genbank:NP_733627.1,GeneID:1099552;Name=NP_733627.1;Note=SCD72A.01%2C unknown%2C partial CDS%2C len: >590 aa~SCD17A.07%2C possible hypothetical protein (fragment)%2C len: >151 aa. Contains possible and cleavable N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD17A.07;product=hypothetical protein;protein_id=NP_733627.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4515823	4515885	.	+	.	ID=id5139;Dbxref=GeneID:1099552;Note=high content in alanine and glycine amino acid residues;gbkey=misc_feature;gene=SCD17A.07
NC_003888.3	RefSeq	gene	4517925	4521269	.	+	.	ID=gene4159;Dbxref=GeneID:1099553;Name=SCD72A.02;gbkey=Gene;gene=SCD72A.02;gene_biotype=protein_coding;gene_synonym=SCD72A.02;locus_tag=SCO4116
NC_003888.3	RefSeq	CDS	4517925	4521269	.	+	0	ID=cds4069;Parent=gene4159;Dbxref=Genbank:NP_628294.1,GeneID:1099553;Name=NP_628294.1;Note=SCD72A.02%2C possible AfsR-like regulatory protein%2C len: 1114 aa%3B similar to many from actinomycetes e.g. TR:CAB61705 (EMBL:AL133220) multi-domain regulatory protein from Streptomyces coelicolor (1334 aa) fasta scores%3B opt: 1324%2C z-score: 1364.5%2C E(): 0%2C 41.1%25 identity in 1357 aa overlap and SW:P25941 (AFSR_STRCO) regulatory protein AfsR from Streptomyces coelicolor (993 aa) fasta scores%3B opt: 533%2C z-score: 548.6%2C E(): 4.3e-23%2C 29.3%25 identity in 1014 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SCD72A.02;product=AfsR-like regulatory protein;protein_id=NP_628294.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4518825	4518848	.	+	.	ID=id5140;Dbxref=GeneID:1099553;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD72A.02
NC_003888.3	RefSeq	gene	4521256	4523319	.	-	.	ID=gene4160;Dbxref=GeneID:1099554;Name=SCD72A.03;gbkey=Gene;gene=SCD72A.03;gene_biotype=protein_coding;gene_synonym=SCD72A.03;locus_tag=SCO4117
NC_003888.3	RefSeq	CDS	4521256	4523319	.	-	0	ID=cds4070;Parent=gene4160;Dbxref=Genbank:NP_628295.1,GeneID:1099554;Name=NP_628295.1;Note=SCD72A.03%2C possible membrane protein%2C len: 687aa%3B contains possible membrane-spanning hydrophobic region (358-453aa) and proline-rich region (495-540aa).;gbkey=CDS;gene=SCD72A.03;product=hypothetical protein;protein_id=NP_628295.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4521700	4521839	.	-	.	ID=id5141;Dbxref=GeneID:1099554;Note=Guanine-rich region of DNA which translates to proline-rich region in CDS SCD72A.03c.;gbkey=misc_feature;gene=SCD72A.03
NC_003888.3	RefSeq	gene	4523502	4524395	.	-	.	ID=gene4161;Dbxref=GeneID:1099555;Name=SCD72A.04c;gbkey=Gene;gene=SCD72A.04c;gene_biotype=protein_coding;gene_synonym=SCD72A.04c;locus_tag=SCO4118
NC_003888.3	RefSeq	CDS	4523502	4524395	.	-	0	ID=cds4071;Parent=gene4161;Dbxref=Genbank:NP_628296.1,GeneID:1099555;Name=NP_628296.1;Note=SCD72A.04c%2C possible tetR-family transcriptional regulator%2C len: 297 aa%3B similar to many proposed transcriptional regulators e.g. TR:CAB58280 (EMBL:AL121849) tetR-family transcriptional regulator from Streptomyces coelicolor (194 aa) fasta scores%3B opt: 238%2C z-score: 239.0%2C E(): 7.5e-06%2C 32.3%25 identity in 189 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a helix-turn-helix motif 63-84 aa;gbkey=CDS;gene=SCD72A.04c;product=TetR family transcriptional regulator;protein_id=NP_628296.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4524117	4524254	.	-	.	ID=id5142;Dbxref=GeneID:1099555;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 20.30%2C E-value 0.0007;gbkey=misc_feature;gene=SCD72A.04c
NC_003888.3	RefSeq	gene	4524821	4526149	.	+	.	ID=gene4162;Dbxref=GeneID:1099556;Name=SCD72A.05;gbkey=Gene;gene=SCD72A.05;gene_biotype=protein_coding;gene_synonym=SCD72A.05;locus_tag=SCO4119
NC_003888.3	RefSeq	CDS	4524821	4526149	.	+	0	ID=cds4072;Parent=gene4162;Dbxref=Genbank:NP_628297.1,GeneID:1099556;Name=NP_628297.1;Note=SCD72A.05%2C possible NADH dehydrogenase%2C len: 442aa%3B similar to many eg. TR:Q9ZC17 (EMBL:AL033505) dehydrogenase from Streptomyces coelicolor SC1E6.05 (629 aa) fasta scores%3B opt: 893%2C z-score: 1049.2%2C E(): 0%2C 38.5%25 identity in 452 aa overlap and SW:P00393 (DHNA_ECOLI) NADH dehydrogenase Ndh (EC 1.6.99.3) from Escherichia coli (433 aa) fasta scores%3B opt: 404%2C z-score: 477.0%2C E(): 4.2e-19%2C 27.0%25 identity in 389 aa overlap.;gbkey=CDS;gene=SCD72A.05;product=NADH dehydrogenase;protein_id=NP_628297.1;transl_table=11
NC_003888.3	RefSeq	gene	4526332	4527990	.	+	.	ID=gene4163;Dbxref=GeneID:1099557;Name=SCD72A.06;gbkey=Gene;gene=SCD72A.06;gene_biotype=protein_coding;gene_synonym=SCD72A.06;locus_tag=SCO4120
NC_003888.3	RefSeq	CDS	4526332	4527990	.	+	0	ID=cds4073;Parent=gene4163;Dbxref=Genbank:NP_628298.1,GeneID:1099557;Name=NP_628298.1;Note=SCD72A.06%2C conserved hypothetical protein%2C len: 552 aa%3B similar in regions to many from Streptomyces coelicolor eg. TR:Q9ZBJ0 (EMBL:AL035161) conserved hypothetical protein (860 aa) fasta scores%3B opt: 906%2C z-score: 1019.8%2C E(): 0%2C 43.5%25 identity in 370 aa overlap;gbkey=CDS;gene=SCD72A.06;product=hypothetical protein;protein_id=NP_628298.1;transl_table=11
NC_003888.3	RefSeq	gene	4528045	4529322	.	-	.	ID=gene4164;Dbxref=GeneID:1099558;Name=SCD72A.07c;gbkey=Gene;gene=SCD72A.07c;gene_biotype=protein_coding;gene_synonym=SCD72A.07c;locus_tag=SCO4121
NC_003888.3	RefSeq	CDS	4528045	4529322	.	-	0	ID=cds4074;Parent=gene4164;Dbxref=Genbank:NP_628299.1,GeneID:1099558;Name=NP_628299.1;Note=SCD72A.07c%2C possible integral membrane protein%2C len: 425aa%3B contains possible membrane-spanning hydrophobic regions. Weakly similar to many eg. SW:P39843 (BMR2_BACSU) multidrug resistance protein 2 from Bacillus subtilis (400 aa) fasta scores%3B opt: 309%2C z-score: 339.7%2C E(): 1.9e-11%2C 22.8%25 identity in 394 aa overlap.;gbkey=CDS;gene=SCD72A.07c;product=hypothetical protein;protein_id=NP_628299.1;transl_table=11
NC_003888.3	RefSeq	gene	4529468	4530016	.	+	.	ID=gene4165;Dbxref=GeneID:1099559;Name=SCD72A.08;gbkey=Gene;gene=SCD72A.08;gene_biotype=protein_coding;gene_synonym=SCD72A.08;locus_tag=SCO4122
NC_003888.3	RefSeq	CDS	4529468	4530016	.	+	0	ID=cds4075;Parent=gene4165;Dbxref=Genbank:NP_628300.1,GeneID:1099559;Name=NP_628300.1;Note=SCD72A.08%2C possible MarR-family transcriptional regulator%2C len: 182 aa%3B similar to many e.g. SW:P42195 (PECS_ERWCH) regulatory protein PecS from Erwinia chrysanthemi (166 aa) fasta scores%3B opt: 183%2C z-score: 231.8%2C E(): 1.9e-05%2C 24.3%25 identity in 152 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and Prosite match to PS00519 Bacterial regulatory proteins%2C asnC family signature;gbkey=CDS;gene=SCD72A.08;product=MarR family transcriptional regulator;protein_id=NP_628300.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4529636	4529956	.	+	.	ID=id5143;Dbxref=GeneID:1099559;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 55.20%2C E-value 1.4e-12;gbkey=misc_feature;gene=SCD72A.08
NC_003888.3	RefSeq	sequence_feature	4529699	4529779	.	+	.	ID=id5144;Dbxref=GeneID:1099559;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature;gbkey=misc_feature;gene=SCD72A.08
NC_003888.3	RefSeq	gene	4530650	4532177	.	+	.	ID=gene4166;Dbxref=GeneID:1099560;Name=rrnA;gbkey=Gene;gene=rrnA;gene_biotype=rRNA;locus_tag=SCOr13
NC_003888.3	RefSeq	rRNA	4530650	4532177	.	+	.	ID=rna61;Parent=gene4166;Dbxref=GeneID:1099560;Note=rrnA%2C 16S ribosomal RNA. Coordinates based on comparison with rrnB from Streptomyces coelicolor (EMBL:AL109848).;gbkey=rRNA;gene=rrnA;product=16S ribosomal RNA
NC_003888.3	RefSeq	exon	4530650	4532177	.	+	.	ID=id5145;Parent=rna61;Dbxref=GeneID:1099560;Note=rrnA%2C 16S ribosomal RNA. Coordinates based on comparison with rrnB from Streptomyces coelicolor (EMBL:AL109848).;gbkey=rRNA;gene=rrnA;product=16S ribosomal RNA
NC_003888.3	RefSeq	gene	4532454	4535576	.	+	.	ID=gene4167;Dbxref=GeneID:1099561;Name=rrnA;gbkey=Gene;gene=rrnA;gene_biotype=rRNA;locus_tag=SCOr14
NC_003888.3	RefSeq	rRNA	4532454	4535576	.	+	.	ID=rna62;Parent=gene4167;Dbxref=GeneID:1099561;Note=rrnA%2C 23S ribosomal RNA. Coordinates based on comparison with rrnB from Streptomyces coelicolor (EMBL:AL109848).;gbkey=rRNA;gene=rrnA;product=23S ribosomal RNA
NC_003888.3	RefSeq	exon	4532454	4535576	.	+	.	ID=id5146;Parent=rna62;Dbxref=GeneID:1099561;Note=rrnA%2C 23S ribosomal RNA. Coordinates based on comparison with rrnB from Streptomyces coelicolor (EMBL:AL109848).;gbkey=rRNA;gene=rrnA;product=23S ribosomal RNA
NC_003888.3	RefSeq	gene	4535678	4535798	.	+	.	ID=gene4168;Dbxref=GeneID:1099562;Name=rrnA;gbkey=Gene;gene=rrnA;gene_biotype=rRNA;locus_tag=SCOr15
NC_003888.3	RefSeq	rRNA	4535678	4535798	.	+	.	ID=rna63;Parent=gene4168;Dbxref=GeneID:1099562;Note=rrnA%2C 5S ribosomal RNA. Coordinates based on comparison with rrnB from Streptomyces coelicolor (EMBL:AL109848).;gbkey=rRNA;gene=rrnA;product=5S ribosomal RNA
NC_003888.3	RefSeq	exon	4535678	4535798	.	+	.	ID=id5147;Parent=rna63;Dbxref=GeneID:1099562;Note=rrnA%2C 5S ribosomal RNA. Coordinates based on comparison with rrnB from Streptomyces coelicolor (EMBL:AL109848).;gbkey=rRNA;gene=rrnA;product=5S ribosomal RNA
NC_003888.3	RefSeq	gene	4535862	4536530	.	-	.	ID=gene4169;Dbxref=GeneID:1099563;Name=SCD72A.09c;gbkey=Gene;gene=SCD72A.09c;gene_biotype=protein_coding;gene_synonym=SCD72A.09c;locus_tag=SCO4123
NC_003888.3	RefSeq	CDS	4535862	4536530	.	-	0	ID=cds4076;Parent=gene4169;Dbxref=Genbank:NP_628301.1,GeneID:1099563;Name=NP_628301.1;Note=SCD72A.09c%2C possible two-component system response regulator%2C len: 222aa%3B similar to many eg. TR:O86632 (EMBL:AL031155) possible two-component regulator from Streptomyces coelicolor (222 aa) fasta scores%3B opt: 973%2C z-score: 1128.5%2C E(): 0%2C 69.1%25 identity in 220 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and Prosite match to PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=CDS;gene=SCD72A.09c;product=two-component system response regulator;protein_id=NP_628301.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4535865	4536059	.	-	.	ID=id5148;Dbxref=GeneID:1099563;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 61.00%2C E-value 2.6e-14;gbkey=misc_feature;gene=SCD72A.09c
NC_003888.3	RefSeq	sequence_feature	4535925	4536008	.	-	.	ID=id5149;Dbxref=GeneID:1099563;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCD72A.09c
NC_003888.3	RefSeq	sequence_feature	4536186	4536527	.	-	.	ID=id5150;Dbxref=GeneID:1099563;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 126.30%2C E-value 5.7e-34;gbkey=misc_feature;gene=SCD72A.09c
NC_003888.3	RefSeq	gene	4536527	4537897	.	-	.	ID=gene4170;Dbxref=GeneID:1099564;Name=SCD72A.10c;gbkey=Gene;gene=SCD72A.10c;gene_biotype=protein_coding;gene_synonym=SCD72A.10c;locus_tag=SCO4124
NC_003888.3	RefSeq	CDS	4536527	4537897	.	-	0	ID=cds4077;Parent=gene4170;Dbxref=Genbank:NP_628302.1,GeneID:1099564;Name=NP_628302.1;Note=SCD72A.10c%2C possible two-component sensor kinase%2C len: 456aa%3B similar to many eg. TR:O86631 (EMBL:AL031155) two-component sensor kinase from Streptomyces coelicolor (429 aa) fasta scores%3B opt: 929%2C z-score: 995.1%2C E(): 0%2C 42.7%25 identity in 422 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase and possible membrane-spanning hydrophobic regions. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD72A.10c;product=two-component sensor kinase;protein_id=NP_628302.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4536545	4537120	.	-	.	ID=id5151;Dbxref=GeneID:1099564;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score -41.40%2C E-value 0.0087;gbkey=misc_feature;gene=SCD72A.10c
NC_003888.3	RefSeq	gene	4537923	4538456	.	+	.	ID=gene4171;Dbxref=GeneID:1099565;Name=SCD72A.11;gbkey=Gene;gene=SCD72A.11;gene_biotype=protein_coding;gene_synonym=SCD72A.11;locus_tag=SCO4125
NC_003888.3	RefSeq	CDS	4537923	4538456	.	+	0	ID=cds4078;Parent=gene4171;Dbxref=Genbank:NP_628303.1,GeneID:1099565;Name=NP_628303.1;Note=SCD72A.11%2C possible acetyltransferase%2C len: 177 aa%3B weakly similar to many eg. TR:AAD52985 (EMBL:AF140221) aminoglycoside 6'-N-acetyltransferase from Xanthomonas maltophilia (153 aa) fasta scores%3B opt: 128%2C z-score: 164.9%2C E(): 0.1%2C 28.7%25 identity in 115 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCD72A.11;product=acetyltransferase;protein_id=NP_628303.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4537926	4538384	.	+	.	ID=id5152;Dbxref=GeneID:1099565;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 34.50%2C E-value 2.4e-06;gbkey=misc_feature;gene=SCD72A.11
NC_003888.3	RefSeq	gene	4538504	4539991	.	-	.	ID=gene4172;Dbxref=GeneID:1099566;Name=SCD72A.12c;gbkey=Gene;gene=SCD72A.12c;gene_biotype=protein_coding;gene_synonym=SCD72A.12c;locus_tag=SCO4126
NC_003888.3	RefSeq	CDS	4538504	4539991	.	-	0	ID=cds4079;Parent=gene4172;Dbxref=Genbank:NP_628304.1,GeneID:1099566;Name=NP_628304.1;Note=SCD72A.12c%2C possible membrane protein%2C len: 495aa%3B similar in regions to others from actinomycetes eg. TR:Q9X8A2 (EMBL:AL049645) hypothetical protein from Streptomyces coelicolor (427 aa) fasta scores%3B opt: 266%2C z-score: 260.7%2C E(): 4.7e-07%2C 27.7%25 identity in 296 aa overlap. Contains possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCD72A.12c;product=hypothetical protein;protein_id=NP_628304.1;transl_table=11
NC_003888.3	RefSeq	gene	4540065	4541480	.	-	.	ID=gene4173;Dbxref=GeneID:1099567;Name=SCD72A.13c;gbkey=Gene;gene=SCD72A.13c;gene_biotype=protein_coding;gene_synonym=SCD72A.13c;locus_tag=SCO4127
NC_003888.3	RefSeq	CDS	4540065	4541480	.	-	0	ID=cds4080;Parent=gene4173;Dbxref=Genbank:NP_628305.1,GeneID:1099567;Name=NP_628305.1;Note=SCD72A.13c%2C possible ATP/GTP-binding protein%2C len: 471 aa%3B similar to TR:CAB72383 (EMBL:AL138977) ATP-binding protein from Streptomyces coelicolor (507 aa) fasta scores%3B opt: 618%2C z-score: 740.6%2C E(): 0%2C 32.9%25 identity in 434 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD72A.13c;product=ATP/GTP-binding protein;protein_id=NP_628305.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4541208	4541231	.	-	.	ID=id5153;Dbxref=GeneID:1099567;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD72A.13c
NC_003888.3	RefSeq	gene	4541493	4543034	.	-	.	ID=gene4174;Dbxref=GeneID:1099568;Name=SCD72A.14c;gbkey=Gene;gene=SCD72A.14c;gene_biotype=protein_coding;gene_synonym=SCD72A.14c;locus_tag=SCO4128
NC_003888.3	RefSeq	CDS	4541493	4543034	.	-	0	ID=cds4081;Parent=gene4174;Dbxref=Genbank:NP_628306.1,GeneID:1099568;Name=NP_628306.1;Note=SCD72A.14c%2C possible membrane protein%2C len: 513aa%3B similar to TR:Q9X871 (EMBL:AL049661) integral membrane protein from Streptomyces coelicolor (488 aa) fasta scores%3B opt: 220%2C z-score: 257.3%2C E(): 7.2e-07%2C 25.7%25 identity in 483 aa overlap. Contains possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCD72A.14c;product=hypothetical protein;protein_id=NP_628306.1;transl_table=11
NC_003888.3	RefSeq	gene	4543049	4544311	.	-	.	ID=gene4175;Dbxref=GeneID:1099569;Name=SCD72A.15c;gbkey=Gene;gene=SCD72A.15c;gene_biotype=protein_coding;gene_synonym=SCD72A.15c;locus_tag=SCO4129
NC_003888.3	RefSeq	CDS	4543049	4544311	.	-	0	ID=cds4082;Parent=gene4175;Dbxref=Genbank:NP_628307.1,GeneID:1099569;Name=NP_628307.1;Note=SCD72A.15c%2C possible integral membrane protein%2C len: 420aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCD72A.15c;product=hypothetical protein;protein_id=NP_628307.1;transl_table=11
NC_003888.3	RefSeq	gene	4544370	4545170	.	-	.	ID=gene4176;Dbxref=GeneID:1099570;Name=SCD72A.16c;gbkey=Gene;gene=SCD72A.16c;gene_biotype=protein_coding;gene_synonym=SCD72A.16c;locus_tag=SCO4130
NC_003888.3	RefSeq	CDS	4544370	4545170	.	-	0	ID=cds4083;Parent=gene4176;Dbxref=Genbank:NP_628308.1,GeneID:1099570;Name=NP_628308.1;Note=SCD72A.16c%2C possible membrane protein%2C len: 420aa%3B contains a possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCD72A.16c;product=hypothetical protein;protein_id=NP_628308.1;transl_table=11
NC_003888.3	RefSeq	gene	4545338	4545646	.	-	.	ID=gene4177;Dbxref=GeneID:1099571;Name=SCD72A.17c;gbkey=Gene;gene=SCD72A.17c;gene_biotype=protein_coding;gene_synonym=SCD72A.17c;locus_tag=SCO4131
NC_003888.3	RefSeq	CDS	4545338	4545646	.	-	0	ID=cds4084;Parent=gene4177;Dbxref=Genbank:NP_628309.1,GeneID:1099571;Name=NP_628309.1;Note=SCD72A.17c%2C possible membrane protein%2C len: 420aa%3B contains possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SCD72A.17c;product=hypothetical protein;protein_id=NP_628309.1;transl_table=11
NC_003888.3	RefSeq	gene	4546029	4547051	.	+	.	ID=gene4178;Dbxref=GeneID:1099572;Name=SCD72A.18;gbkey=Gene;gene=SCD72A.18;gene_biotype=protein_coding;gene_synonym=SCD72A.18;locus_tag=SCO4132
NC_003888.3	RefSeq	CDS	4546029	4547051	.	+	0	ID=cds4085;Parent=gene4178;Dbxref=Genbank:NP_628310.1,GeneID:1099572;Name=NP_628310.1;Note=SCD72A.18%2C possible  transglycosylase%2C len: 340aa%3B similar to TR:CAB72389 (EMBL:AL138977) hypothetical protein from Streptomyces coelicolor (377 aa) fasta scores%3B opt: 310%2C z-score: 341.7%2C E(): 1.4e-11%2C 33.1%25 identity in 254 aa overlap. Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family and Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain. Also contains a possible non-cleavable N-terminal signal sequence.;gbkey=CDS;gene=SCD72A.18;product=transglycosylase;protein_id=NP_628310.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4546212	4546580	.	+	.	ID=id5154;Dbxref=GeneID:1099572;Note=Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain%2C score 56.10%2C E-value 7.8e-13;gbkey=misc_feature;gene=SCD72A.18
NC_003888.3	RefSeq	sequence_feature	4546668	4547012	.	+	.	ID=id5155;Dbxref=GeneID:1099572;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 111.70%2C E-value 1.4e-29;gbkey=misc_feature;gene=SCD72A.18
NC_003888.3	RefSeq	gene	4547257	4547973	.	+	.	ID=gene4179;Dbxref=GeneID:1099573;Name=SCD72A.19;gbkey=Gene;gene=SCD72A.19;gene_biotype=protein_coding;gene_synonym=SCD72A.19;locus_tag=SCO4133
NC_003888.3	RefSeq	CDS	4547257	4547973	.	+	0	ID=cds4086;Parent=gene4179;Dbxref=Genbank:NP_628311.1,GeneID:1099573;Name=NP_628311.1;Note=SCD72A.19%2C possible integral membrane protein%2C len: 238aa%3B N-terminal region similar to others eg. TR:O86625 (EMBL:AL031155) integral membrane protein from Streptomyces coelicolor (201 aa) fasta scores%3B opt: 321%2C z-score: 379.3%2C E(): 1.1e-13%2C 35.8%25 identity in 179 aa overlap. Contains possible membrane-spanning hydrophobic regions and Pfam match to entry PF01569 PAP2%2C PAP2 superfamily;gbkey=CDS;gene=SCD72A.19;product=hypothetical protein;protein_id=NP_628311.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4547359	4547820	.	+	.	ID=id5156;Dbxref=GeneID:1099573;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score 55.00%2C E-value 1.7e-12;gbkey=misc_feature;gene=SCD72A.19
NC_003888.3	RefSeq	gene	4547977	4549560	.	-	.	ID=gene4180;Dbxref=GeneID:1099574;Name=SCD72A.20;gbkey=Gene;gene=SCD72A.20;gene_biotype=protein_coding;gene_synonym=SCD72A.20,SCD84.01c;locus_tag=SCO4134
NC_003888.3	RefSeq	CDS	4547977	4549560	.	-	0	ID=cds4087;Parent=gene4180;Dbxref=Genbank:NP_733628.1,GeneID:1099574;Name=NP_733628.1;Note=SCD84.01c%2C possible lipoprotein%2C len: >160 aa%3B similar to N-terminal region of TR:Q9X5Q4 (EMBL:AF127374) Streptomyces lavendulae MitR%2C 514 aa%3B fasta scores: opt: 274 z-score: 307.9 E(): 1.1e-09%3B 34.6%25 identity in 133 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence~SCD72A.20%2C possible lipoprotein%2C partial CDS%2C len: >403aa%3B forms C-terminus of TR:CAB88467 (EMBL:AL353816) on the overlapping Streptomyces coelicolor cosmid. Similar to many of undefined function eg. TR:Q9X5Q4 (EMBL:AF127374) from the mitomycin C biosynthetic cluster of Streptomyces lavendulae (514 aa) fasta scores%3B opt: 932%2C z-score: 1056.7%2C E(): 0%2C 37.1%25 identity in 412 aa overlap. Contains Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain.;gbkey=CDS;gene=SCD72A.20;product=lipoprotein;protein_id=NP_733628.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4548796	4549188	.	-	.	ID=id5157;Dbxref=GeneID:1099574;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score -27.20%2C E-value 0.00019;gbkey=misc_feature;gene=SCD72A.20
NC_003888.3	RefSeq	sequence_feature	4549495	4549527	.	-	.	ID=id5158;Dbxref=GeneID:1099574;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD72A.20
NC_003888.3	RefSeq	ribosome_entry_site	4549565	4549569	.	-	.	ID=id5159;gbkey=RBS
NC_003888.3	RefSeq	gene	4550161	4551054	.	+	.	ID=gene4181;Dbxref=GeneID:1099575;Name=SCD84.02;gbkey=Gene;gene=SCD84.02;gene_biotype=protein_coding;gene_synonym=SCD84.02;locus_tag=SCO4135
NC_003888.3	RefSeq	CDS	4550161	4551054	.	+	0	ID=cds4088;Parent=gene4181;Dbxref=Genbank:NP_628312.1,GeneID:1099575;Name=NP_628312.1;Note=SCD84.02%2C possible lipoprotein%2C len: 297 aa%3B similar to TR:CAB75314 (EMBL:AL139164) Streptomyces coelicolor lipoprotein SCC46.10%2C 285 aa%3B fasta scores: opt: 180 z-score: 203.0 E(): 0.00075%3B 22.4%25 identity in 232 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD84.02;product=lipoprotein;protein_id=NP_628312.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4550227	4550259	.	+	.	ID=id5160;Dbxref=GeneID:1099575;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD84.02
NC_003888.3	RefSeq	ribosome_entry_site	4551120	4551123	.	+	.	ID=id5161;gbkey=RBS
NC_003888.3	RefSeq	gene	4551282	4551683	.	-	.	ID=gene4182;Dbxref=GeneID:1099576;Name=SCD84.03c;gbkey=Gene;gene=SCD84.03c;gene_biotype=protein_coding;gene_synonym=SCD84.03c;locus_tag=SCO4136
NC_003888.3	RefSeq	CDS	4551282	4551683	.	-	0	ID=cds4089;Parent=gene4182;Dbxref=Genbank:NP_628313.1,GeneID:1099576;Name=NP_628313.1;Note=SCD84.03c%2C hypothetical protein%2C len: 133 aa%3B similar to TR:O06070 (EMBL:Z95398) Mycobacterium leprae hypothetical 15.2 kD protein MLCL622.07%2C 135 aa%3B fasta scores: opt: 374 z-score: 470.4 E(): 9.6e-19%3B 55.9%25 identity in 102 aa overlap;gbkey=CDS;gene=SCD84.03c;product=hypothetical protein;protein_id=NP_628313.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4551689	4551693	.	-	.	ID=id5162;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4551880	4551884	.	+	.	ID=id5163;gbkey=RBS
NC_003888.3	RefSeq	gene	4551891	4552511	.	+	.	ID=gene4183;Dbxref=GeneID:1099577;Name=SCD84.04;gbkey=Gene;gene=SCD84.04;gene_biotype=protein_coding;gene_synonym=SCD84.04;locus_tag=SCO4137
NC_003888.3	RefSeq	CDS	4551891	4552511	.	+	0	ID=cds4090;Parent=gene4183;Dbxref=Genbank:NP_628314.1,GeneID:1099577;Name=NP_628314.1;Note=SCD84.04%2C hypothetical protein%2C len: 206 aa%3B similar to TR:AAF10501 (EMBL:AE001945) Deinococcus radiodurans conserved hypothetical protein DR0924%2C 212 aa%3B fasta scores: opt: 347 z-score: 407.5 E(): 3.1e-15%3B 32.4%25 identity in 210 aa overlap. Contains Pfam match to entry PF01865 DUF47%2C Protein of unknown function;gbkey=CDS;gene=SCD84.04;product=hypothetical protein;protein_id=NP_628314.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4551891	4552502	.	+	.	ID=id5164;Dbxref=GeneID:1099577;Note=Pfam match to entry PF01865 DUF47%2C Protein of unknown function%2C score 66.30%2C E-value 6.7e-16;gbkey=misc_feature;gene=SCD84.04
NC_003888.3	RefSeq	gene	4552519	4553517	.	+	.	ID=gene4184;Dbxref=GeneID:1099578;Name=pitH;gbkey=Gene;gene=pitH;gene_biotype=protein_coding;gene_synonym=pitH,SCD84.05;locus_tag=SCO4138
NC_003888.3	RefSeq	CDS	4552519	4553517	.	+	0	ID=cds4091;Parent=gene4184;Dbxref=Genbank:NP_628315.1,GeneID:1099578;Name=NP_628315.1;Note=SCD84.05%2C pitH%2C phosphate transport protein%2C len: 332 aa%3B similar to N-terminal region of SW:PITH_STRHA (EMBL:L05390) Streptomyces halstedii low-affinity inorganic phosphate transporter (fragment)%2C 213 aa%3B fasta scores: opt: 768 z-score: 850.1 E(): 0%3B 59.8%25 identity in 189 aa overlap%2C to TR:O30499 (EMBL:AF008187) Sinorhizobium meliloti phosphate transport protein%2C Pit%2C 334 aa%3B fasta scores: opt: 988 z-score: 1087.8 E(): 0%3B 48.3%25 identity in 327 aa overlap and to TR:CAB59459 (EMBL:AL132644) Streptomyces coelicolor hypothetical protein SCI8.28%2C 423 aa%3B fasta scores: opt: 991 z-score: 986.9 E(): 0%3B 45.9%25 identity in 331 aa overlap. Contains Pfam match to entry PF01384 PHO4%2C Phosphate transporter family. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=pitH;product=phosphate transport protein;protein_id=NP_628315.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4552576	4553478	.	+	.	ID=id5165;Dbxref=GeneID:1099578;Note=Pfam match to entry PF01384 PHO4%2C Phosphate transporter family%2C score 140.70%2C E-value 2.5e-38;gbkey=misc_feature;gene=pitH
NC_003888.3	RefSeq	gene	4553637	4554413	.	-	.	ID=gene4185;Dbxref=GeneID:1099579;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;gene_synonym=pstB,SCD84.06c;locus_tag=SCO4139
NC_003888.3	RefSeq	CDS	4553637	4554413	.	-	0	ID=cds4092;Parent=gene4185;Dbxref=Genbank:NP_628316.1,GeneID:1099579;Name=NP_628316.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate transporter ATP-binding protein;protein_id=NP_628316.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4553745	4554326	.	-	.	ID=id5166;Dbxref=GeneID:1099579;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 200.70%2C E-value 2.3e-56;gbkey=misc_feature;gene=pstB
NC_003888.3	RefSeq	sequence_feature	4553925	4553969	.	-	.	ID=id5167;Dbxref=GeneID:1099579;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=pstB
NC_003888.3	RefSeq	sequence_feature	4554282	4554305	.	-	.	ID=id5168;Dbxref=GeneID:1099579;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=pstB
NC_003888.3	RefSeq	gene	4554467	4555531	.	-	.	ID=gene4186;Dbxref=GeneID:1099580;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;gene_synonym=pstA,SCD84.07c;locus_tag=SCO4140
NC_003888.3	RefSeq	CDS	4554467	4555531	.	-	0	ID=cds4093;Parent=gene4186;Dbxref=Genbank:NP_628317.1,GeneID:1099580;Name=NP_628317.1;Note=SCD84.07c%2C pstA%2C phosphate ABC transport system permease%2C len: 354 aa%3B similar to TR:O86345 (EMBL:X75297) Mycobacterium tuberculosis phosphate transport system permease PstA1 aa%3B fasta scores: opt: 870 z-score: 1011.0 E(): 0%3B 48.4%25 identity in 281 aa overlap and to SW:PSTA_ECOLI (EMBL:X02723) Escherichia coli phosphate transport system permease PstA or PhoT%2C 296 aa%3B fasta scores: opt: 605 z-score: 705.5 E(): 7.7e-32%3B 37.2%25 identity in 277 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=NP_628317.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4554593	4554847	.	-	.	ID=id5169;Dbxref=GeneID:1099580;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 57.40%2C E-value 3e-13;gbkey=misc_feature;gene=pstA
NC_003888.3	RefSeq	sequence_feature	4554758	4554844	.	-	.	ID=id5170;Dbxref=GeneID:1099580;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=pstA
NC_003888.3	RefSeq	gene	4555528	4556538	.	-	.	ID=gene4187;Dbxref=GeneID:1099581;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;gene_synonym=pstC,SCD84.08c;locus_tag=SCO4141
NC_003888.3	RefSeq	CDS	4555528	4556538	.	-	0	ID=cds4094;Parent=gene4187;Dbxref=Genbank:NP_628318.1,GeneID:1099581;Name=NP_628318.1;Note=SCD84.08c%2C pstC%2C phosphate ABC transport system permease%2C len: 336 aa%3B similar to TR:O86344 (EMBL:Z47983) Mycobacterium tuberculosis phosphate transport system permease PstC2%2C 324 aa%3B fasta scores: opt: 900 z-score: 993.3 E(): 0%3B 49.4%25 identity in 308 aa overlap and to SW:PSTC_ECOLI (EMBL:X02723) Escherichia coli phosphate transport system permease PstC or PhoW%2C 319 aa%3B fasta scores: opt: 667 z-score: 738.3 E(): 0%3B 40.5%25 identity in 311 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=pstC;product=phosphate ABC transporter permease;protein_id=NP_628318.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4555684	4555914	.	-	.	ID=id5171;Dbxref=GeneID:1099581;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 40.00%2C E-value 5.5e-08;gbkey=misc_feature;gene=pstC
NC_003888.3	RefSeq	sequence_feature	4555825	4555911	.	-	.	ID=id5172;Dbxref=GeneID:1099581;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=pstC
NC_003888.3	RefSeq	ribosome_entry_site	4556544	4556548	.	-	.	ID=id5173;gbkey=RBS
NC_003888.3	RefSeq	gene	4556707	4557819	.	-	.	ID=gene4188;Dbxref=GeneID:1099582;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;gene_synonym=pstS,SCD84.09c;locus_tag=SCO4142
NC_003888.3	RefSeq	CDS	4556707	4557819	.	-	0	ID=cds4095;Parent=gene4188;Dbxref=Genbank:NP_628319.1,GeneID:1099582;Name=NP_628319.1;Note=SCD84.09c%2C pstS%2C phosphate-binding protein precursor%2C len: 370 aa%3B similar to TR:O86343 (EMBL:Z95209) Mycobacterium tuberculosis phosphate-binding protein 3 precursor PstS3 or PhoS2%2C 370 aa%3B fasta scores: opt: 941 z-score: 994.7 E(): 0%3B 42.0%25 identity in 374 aa overlap and to SW:PSTS_ECOLI (EMBL:K01992) Escherichia coli phosphate-binding periplasmic protein precursor PstS or PhoS%2C 346 aa%3B fasta scores: opt: 451 z-score: 481.3 E(): 2.4e-19%3B 31.2%25 identity in 321 aa overlap. Contains Pfam match to entry PF01449 PstS%2C Phosphate-binding protein%2C correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and to entry PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=pstS;product=phosphate-binding protein;protein_id=NP_628319.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4556809	4556856	.	-	.	ID=id5174;Dbxref=GeneID:1099582;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=misc_feature;gene=pstS
NC_003888.3	RefSeq	sequence_feature	4556818	4557675	.	-	.	ID=id5175;Dbxref=GeneID:1099582;Note=Pfam match to entry PF01449 PstS%2C Phosphate-binding protein%2C score 273.20%2C E-value 3.4e-78;gbkey=misc_feature;gene=pstS
NC_003888.3	RefSeq	sequence_feature	4557754	4557786	.	-	.	ID=id5176;Dbxref=GeneID:1099582;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=pstS
NC_003888.3	RefSeq	repeat_region	4558067	4558104	.	+	.	ID=id5177;Note=conserved repeat 3X GCGGGGGTGACT;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4558121	4558549	.	-	.	ID=gene4189;Dbxref=GeneID:1099583;Name=SCD84.10c;gbkey=Gene;gene=SCD84.10c;gene_biotype=protein_coding;gene_synonym=SCD84.10c;locus_tag=SCO4143
NC_003888.3	RefSeq	CDS	4558121	4558549	.	-	0	ID=cds4096;Parent=gene4189;Dbxref=Genbank:NP_628320.1,GeneID:1099583;Name=NP_628320.1;Note=SCD84.10c%2C possible mutT-like protein%2C len: 142 aa%3B similar to TR:O93721 (EMBL:U82368) Pyrobaculum aerophilum diadenosine 5'5'''-P1%2CP4-tetraphosphate pyrophosphohydrolase%2C 143 aa%3B fasta scores: opt: 169 z-score: 214.0 E(): 0.00018%3B 37.5%25 identity in 120 aa overlap%2C to TR:P96590 (EMBL:AB001488) Bacillus subtilis MutT protein%2C 149 aa%3B fasta scores: opt: 148 z-score: 189.0 E(): 0.0046%3B 28.2%25 identity in 110 aa overlap and to SW:MUTX_STRPN (EMBL:Z21702) Streptococcus pneumoniae mutator MutT protein (7%2C8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-DGTPAse) (EC 3.6.1.-) MutX%2C 154 aa%3B blastp scores: Score %3D 87 (30.6 bits)%2C Expect %3D 0.0081%2C P %3D 0.0080 Identities %3D 35/117 (29%25)%2C Positives %3D 54/117 (46%25). Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and match to Prosite entry PS00893 mutT domain signature;gbkey=CDS;gene=SCD84.10c;product=mutT-like protein;protein_id=NP_628320.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4558343	4558459	.	-	.	ID=id5178;Dbxref=GeneID:1099583;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 35.60%2C E-value 1e-08;gbkey=misc_feature;gene=SCD84.10c
NC_003888.3	RefSeq	sequence_feature	4558352	4558411	.	-	.	ID=id5179;Dbxref=GeneID:1099583;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SCD84.10c
NC_003888.3	RefSeq	ribosome_entry_site	4558560	4558564	.	-	.	ID=id5180;gbkey=RBS
NC_003888.3	RefSeq	gene	4558596	4559762	.	-	.	ID=gene4190;Dbxref=GeneID:1099584;Name=SCD84.11c;gbkey=Gene;gene=SCD84.11c;gene_biotype=protein_coding;gene_synonym=SCD84.11c;locus_tag=SCO4144
NC_003888.3	RefSeq	CDS	4558596	4559762	.	-	0	ID=cds4097;Parent=gene4190;Dbxref=Genbank:NP_628321.1,GeneID:1099584;Name=NP_628321.1;Note=SCD84.11c%2C unknown%2C len: 388 aa%3B similar to TR:Q9EUS7 (EMBL:AJ243674) MutT Protein from Streptomyces griseus subsp. griseus (337 aa) fasta scores%3B opt: 357%2C Z-score: 350.5%2C E(): 6.9e-12%2C 53.403%25 identity (68.227%25 ungapped) in 382 aa overlap. Contains TTA leucine codon%2C possible target for bldA regulation. High %25 of G+C content;gbkey=CDS;gene=SCD84.11c;product=hypothetical protein;protein_id=NP_628321.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4559160	4559162	.	-	.	ID=id5181;Dbxref=GeneID:1099584;Note=TTA Leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD84.11c
NC_003888.3	RefSeq	gene	4559965	4562289	.	-	.	ID=gene4191;Dbxref=GeneID:1099585;Name=ppk;gbkey=Gene;gene=ppk;gene_biotype=protein_coding;gene_synonym=ppk,SCD84.12c;locus_tag=SCO4145
NC_003888.3	RefSeq	CDS	4559965	4562289	.	-	0	ID=cds4098;Parent=gene4191;Dbxref=Genbank:NP_628322.1,GeneID:1099585;Name=NP_628322.1;Note=catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate;gbkey=CDS;gene=ppk;product=polyphosphate kinase;protein_id=NP_628322.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4562298	4562301	.	-	.	ID=id5182;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	4562487	4562599	.	+	.	ID=id5183;Note=possible stem-loop at residues 13409 GGGTCGCGCCGGGGGGTGTCCGTCC 13434-13496 GGGCGGACACCCCCCGACACGCCCCC 13521. Score 50: 22/26 (84%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	repeat_region	4562596	4562639	.	+	.	ID=id5184;Note=degenerate repeat: 6x CCCCTCCTCGCCGTACGCGGCTCTCCCCGCCA (T/A)CGC(T/C)CCG(C/G)GT(C/A);gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4562640	4562683	.	+	.	ID=id5185;Note=degenerate repeat: 6x CCCCTCCTCGCCGTACGCGGCTCTCCCCGCCA (T/A)CGC(T/C)CCG(C/G)GT(C/A);gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4562684	4562727	.	+	.	ID=id5186;Note=degenerate repeat: 6x CCCCTCCTCGCCGTACGCGGCTCTCCCCGCCA (T/A)CGC(T/C)CCG(C/G)GT(C/A);gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4562728	4562771	.	+	.	ID=id5187;Note=degenerate repeat: 6x CCCCTCCTCGCCGTACGCGGCTCTCCCCGCCA (T/A)CGC(T/C)CCG(C/G)GT(C/A);gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4562772	4562815	.	+	.	ID=id5188;Note=degenerate repeat: 6x CCCCTCCTCGCCGTACGCGGCTCTCCCCGCCA (T/A)CGC(T/C)CCG(C/G)GT(C/A);gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4562816	4562859	.	+	.	ID=id5189;Note=degenerate repeat: 6x CCCCTCCTCGCCGTACGCGGCTCTCCCCGCCA (T/A)CGC(T/C)CCG(C/G)GT(C/A);gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	4563123	4563129	.	+	.	ID=id5190;gbkey=RBS
NC_003888.3	RefSeq	gene	4563131	4563673	.	+	.	ID=gene4192;Dbxref=GeneID:1099586;Name=SCD84.13;gbkey=Gene;gene=SCD84.13;gene_biotype=protein_coding;gene_synonym=SCD84.13;locus_tag=SCO4146
NC_003888.3	RefSeq	CDS	4563131	4563673	.	+	0	ID=cds4099;Parent=gene4192;Dbxref=Genbank:NP_628323.1,GeneID:1099586;Name=NP_628323.1;Note=SCD84.13%2C probable ECF subfamily sigma factor%2C len: 180 aa%3B similar to TR:Q9WWP4 (EMBL:AF121850) Synechococcus sp. SigH%2C 199 aa%3B fasta scores: opt: 273 z-score: 333.6 E(): 4e-11%3B 37.4%25 identity in 163 aa overlap and to TR:O05767 (EMBL:U87307) Mycobacterium smegmatis extracytoplasmic function alternative sigma factor%2C SigE%2C 204 aa%3B fasta scores: opt: 261 z-score: 319.3 E(): 2.5e-10%3B 33.5%25 identity in 188 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=SCD84.13;product=ECF family RNA polymerase sigma factor;protein_id=NP_628323.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4563236	4563439	.	+	.	ID=id5191;Dbxref=GeneID:1099586;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 49.30%2C E-value 8.7e-11;gbkey=misc_feature;gene=SCD84.13
NC_003888.3	RefSeq	ribosome_entry_site	4563658	4563662	.	+	.	ID=id5192;Dbxref=GeneID:1099586;gbkey=RBS;gene=SCD84.13
NC_003888.3	RefSeq	gene	4563670	4564533	.	+	.	ID=gene4193;Dbxref=GeneID:1099587;Name=SCD84.14;gbkey=Gene;gene=SCD84.14;gene_biotype=protein_coding;gene_synonym=SCD84.14;locus_tag=SCO4147
NC_003888.3	RefSeq	CDS	4563670	4564533	.	+	0	ID=cds4100;Parent=gene4193;Dbxref=Genbank:NP_628324.1,GeneID:1099587;Name=NP_628324.1;Note=SCD84.14%2C possible integral membrane protein%2C len: 287 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD84.14;product=hypothetical protein;protein_id=NP_628324.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4564570	4564573	.	+	.	ID=id5193;gbkey=RBS
NC_003888.3	RefSeq	gene	4564580	4565449	.	+	.	ID=gene4194;Dbxref=GeneID:1099588;Name=SCD84.15;gbkey=Gene;gene=SCD84.15;gene_biotype=protein_coding;gene_synonym=SCD84.15;locus_tag=SCO4148
NC_003888.3	RefSeq	CDS	4564580	4565449	.	+	0	ID=cds4101;Parent=gene4194;Dbxref=Genbank:NP_628325.1,GeneID:1099588;Name=NP_628325.1;Note=SCD84.15%2C probable ABC transport system ATP-binding protein%2C len: 289 aa%3B similar to TR:AAF23811 (EMBL:AF213822) Zymomonas mobilis ABC binding protein%2C 298 aa%3B fasta scores: opt: 607 z-score: 650.5 E(): 8.9e-29%3B 38.6%25 identity in 285 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCD84.15;product=ABC transporter ATP-binding protein;protein_id=NP_628325.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4564664	4565215	.	+	.	ID=id5194;Dbxref=GeneID:1099588;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 193.40%2C E-value 3.5e-54;gbkey=misc_feature;gene=SCD84.15
NC_003888.3	RefSeq	sequence_feature	4564685	4564708	.	+	.	ID=id5195;Dbxref=GeneID:1099588;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD84.15
NC_003888.3	RefSeq	sequence_feature	4564991	4565035	.	+	.	ID=id5196;Dbxref=GeneID:1099588;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCD84.15
NC_003888.3	RefSeq	ribosome_entry_site	4565434	4565438	.	+	.	ID=id5197;Dbxref=GeneID:1099588;gbkey=RBS;gene=SCD84.15
NC_003888.3	RefSeq	gene	4565446	4566975	.	+	.	ID=gene4195;Dbxref=GeneID:1099589;Name=SCD84.16;gbkey=Gene;gene=SCD84.16;gene_biotype=protein_coding;gene_synonym=SCD84.16;locus_tag=SCO4149
NC_003888.3	RefSeq	CDS	4565446	4566975	.	+	0	ID=cds4102;Parent=gene4195;Dbxref=Genbank:NP_628326.1,GeneID:1099589;Name=NP_628326.1;Note=SCD84.16%2C possible ABC transport system transmembrane protein%2C len: 509 aa%3B N-terminal region similar to TR:CAB50958 (EMBL:AL096849) Streptomyces coelicolor ABC-transporter transmembrane protein SCI11.32%2C 239 aa%3B fasta scores: opt: 142 z-score: 168.1 E(): 0.066%3B 27.9%25 identity in 244 aa overlap. Contains possible hydrophobic membrane spanning regions in N-terminal region;gbkey=CDS;gene=SCD84.16;product=ABC transporter;protein_id=NP_628326.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4566985	4566988	.	+	.	ID=id5198;gbkey=RBS
NC_003888.3	RefSeq	gene	4566999	4567619	.	+	.	ID=gene4196;Dbxref=GeneID:1099590;Name=SCD84.17;gbkey=Gene;gene=SCD84.17;gene_biotype=protein_coding;gene_synonym=SCD84.17;locus_tag=SCO4150
NC_003888.3	RefSeq	CDS	4566999	4567619	.	+	0	ID=cds4103;Parent=gene4196;Dbxref=Genbank:NP_628327.1,GeneID:1099590;Name=NP_628327.1;Note=SCD84.17%2C possible ABC transport system transmembrane protein%2C len: 206 aa%3B similar to TR:O69958 (EMBL:AL022268) Streptomyces coelicolor transmembrane transport protein SC4H2.03c%2C 411 aa%3B fasta scores: opt: 136 z-score: 161.5 E(): 0.16%3B 30.8%25 identity in 185 aa overlap. Contains possible hydrophobic membrane sapnning regions;gbkey=CDS;gene=SCD84.17;product=ABC transporter;protein_id=NP_628327.1;transl_table=11
NC_003888.3	RefSeq	gene	4567662	4568591	.	-	.	ID=gene4197;Dbxref=GeneID:1099591;Name=SCD84.18c;gbkey=Gene;gene=SCD84.18c;gene_biotype=protein_coding;gene_synonym=SCD84.18c;locus_tag=SCO4151
NC_003888.3	RefSeq	CDS	4567662	4568591	.	-	0	ID=cds4104;Parent=gene4197;Dbxref=Genbank:NP_628328.1,GeneID:1099591;Name=NP_628328.1;Note=SCD84.18c%2C possible acetyltransferase%2C len: 309 aa%3B similar to TR:O53831 (EMBL:AL022004) Mycobacterium tuberculosis hypothetical 33.6 kD protein MTV043.11%2C 315 aa%3B fasta scores: opt: 662 z-score: 773.0 E(): 0%3B 45.1%25 identity in 304 aa overlap and C-terminal region to SW:RIMI_ECOLI (EMBL:X06117) Escherichia coli ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) RimI%2C 148 aa%3B fasta scores: opt: 159 z-score: 195.2 E(): 0.0021%3B 31.3%25 identity in 112 aa overlap. Contains 2x Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCD84.18c;product=acetyltransferase;protein_id=NP_628328.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4567701	4568090	.	-	.	ID=id5199;Dbxref=GeneID:1099591;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 54.90%2C E-value 1.7e-12;gbkey=misc_feature;gene=SCD84.18c
NC_003888.3	RefSeq	sequence_feature	4568172	4568540	.	-	.	ID=id5200;Dbxref=GeneID:1099591;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 18.70%2C E-value 0.017;gbkey=misc_feature;gene=SCD84.18c
NC_003888.3	RefSeq	gene	4568800	4570638	.	+	.	ID=gene4198;Dbxref=GeneID:1099592;Name=SCD84.19;gbkey=Gene;gene=SCD84.19;gene_biotype=protein_coding;gene_synonym=SCD84.19;locus_tag=SCO4152
NC_003888.3	RefSeq	CDS	4568800	4570638	.	+	0	ID=cds4105;Parent=gene4198;Dbxref=Genbank:NP_628329.1,GeneID:1099592;Name=NP_628329.1;Note=SCD84.19%2C possible  5'-nucleotidase%2C len: 612 aa%3B similar to SW:5NTD_DISOM (EMBL:X62278) Discopyge ommata 5'-nucleotidase precursor (EC 3.1.3.5) (ecto-nucleotidase)%2C 577 aa%3B fasta scores: opt: 322 z-score: 332.6 E(): 4.6e-11%3B 24.6%25 identity in 574 aa overlap. Contains Pfam match to entry PF01009 5_nucleotidase%2C 5'-nucleotidase and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD84.19;product=5'-nucleotidase;protein_id=NP_628329.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4568881	4570632	.	+	.	ID=id5201;Dbxref=GeneID:1099592;Note=Pfam match to entry PF01009 5_nucleotidase%2C 5'-nucleotidase%2C score 194.60%2C E-value 1.5e-54;gbkey=misc_feature;gene=SCD84.19
NC_003888.3	RefSeq	stem_loop	4570655	4570734	.	+	.	ID=id5202;Note=possible stem-loop at residues 21577 GGCGAGGGGCCCGGCACG 21594-21639 CGTGCCGGCCCCTCGCC 21656. Score 54: 18/18 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4570805	4571188	.	-	.	ID=gene4199;Dbxref=GeneID:1099593;Name=SCD84.20c;gbkey=Gene;gene=SCD84.20c;gene_biotype=protein_coding;gene_synonym=SCD84.20c;locus_tag=SCO4153
NC_003888.3	RefSeq	CDS	4570805	4571188	.	-	0	ID=cds4106;Parent=gene4199;Dbxref=Genbank:NP_628330.1,GeneID:1099593;Name=NP_628330.1;Note=SCD84.20c%2C hypothetical protein%2C len: 127 aa%3B similar to TR:CAB58283 (EMBL:AL121850) Streptomyces coelicolor conserved hypothetical protein SCC78.02%2C 123 aa%3B fasta scores: opt: 265 z-score: 344.9 E(): 9.4e-12%3B 40.2%25 identity in 107 aa overlap. Contains Pfam match to entry PF01638 DUF24%2C Protein of unknown function;gbkey=CDS;gene=SCD84.20c;product=hypothetical protein;protein_id=NP_628330.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4570832	4571104	.	-	.	ID=id5203;Dbxref=GeneID:1099593;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function%2C score 132.50%2C E-value 7.6e-36;gbkey=misc_feature;gene=SCD84.20c
NC_003888.3	RefSeq	gene	4571295	4571696	.	+	.	ID=gene4200;Dbxref=GeneID:1099594;Name=SCD84.21;gbkey=Gene;gene=SCD84.21;gene_biotype=protein_coding;gene_synonym=SCD84.21;locus_tag=SCO4154
NC_003888.3	RefSeq	CDS	4571295	4571696	.	+	0	ID=cds4107;Parent=gene4200;Dbxref=Genbank:NP_628331.1,GeneID:1099594;Name=NP_628331.1;Note=SCD84.21%2C hypothetical protein%2C len: 142 aa%3B similar to TR:Q9ZBJ6 (EMBL:AL035161) Streptomyces coelicolor conserved hypothetical protein SC9C7.14c%2C 132 aa%3B fasta scores: opt: 186 z-score: 244.7 E(): 3.6e-06%3B 34.9%25 identity in 106 aa overlap. Contains Pfam match to entry PF01042 UPF0076%2C Domain of unknown function;gbkey=CDS;gene=SCD84.21;product=hypothetical protein;protein_id=NP_628331.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4571346	4571681	.	+	.	ID=id5204;Dbxref=GeneID:1099594;Note=Pfam match to entry PF01042 UPF0076%2C Domain of unknown function%2C score 22.40%2C E-value 4.3e-06;gbkey=misc_feature;gene=SCD84.21
NC_003888.3	RefSeq	gene	4571671	4573116	.	-	.	ID=gene4201;Dbxref=GeneID:1099595;Name=SCD84.22c;gbkey=Gene;gene=SCD84.22c;gene_biotype=protein_coding;gene_synonym=SCD84.22c;locus_tag=SCO4155
NC_003888.3	RefSeq	CDS	4571671	4573116	.	-	0	ID=cds4108;Parent=gene4201;Dbxref=Genbank:NP_628332.1,GeneID:1099595;Name=NP_628332.1;Note=SCD84.22c%2C probable two-component system sensor%2C len: 481 aa%3B similar to TR:O53895 (EMBL:AL021999) Mycobacterium tuberculosis  two-component sensor%2C MTV044.10%2C 504 aa%3B fasta scores: opt: 884 z-score: 949.8 E(): 0%3B 39.4%25 identity in 482 aa overlap and to SW:AFQ2_STRCO (EMBL:D10654) Streptomyces coelicolor sensor protein AfsQ2 (EC 2.7.3.-)%2C 535 aa%3B fasta scores: opt: 404 z-score: 435.9 E(): 8e-17%3B 31.4%25 identity in 526 aa overlap. Contains Pfam matches to entries PF00672 DUF5%2C Domain found in bacterial signal proteins and PF00512 signal%2C Histidine kinase and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD84.22c;product=two-component system sensor;protein_id=NP_628332.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4571728	4572348	.	-	.	ID=id5205;Dbxref=GeneID:1099595;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 165.00%2C E-value 1.2e-45;gbkey=misc_feature;gene=SCD84.22c
NC_003888.3	RefSeq	sequence_feature	4572388	4572606	.	-	.	ID=id5206;Dbxref=GeneID:1099595;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 61.90%2C E-value 1.3e-14;gbkey=misc_feature;gene=SCD84.22c
NC_003888.3	RefSeq	sequence_feature	4573009	4573041	.	-	.	ID=id5207;Dbxref=GeneID:1099595;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD84.22c
NC_003888.3	RefSeq	gene	4573113	4573859	.	-	.	ID=gene4202;Dbxref=GeneID:1099596;Name=SCD84.23c;gbkey=Gene;gene=SCD84.23c;gene_biotype=protein_coding;gene_synonym=SCD84.23c;locus_tag=SCO4156
NC_003888.3	RefSeq	CDS	4573113	4573859	.	-	0	ID=cds4109;Parent=gene4202;Dbxref=Genbank:NP_628333.1,GeneID:1099596;Name=NP_628333.1;Note=SCD84.23c%2C probable two-component systen response regulator%2C len: 248 aa%3B similar to SW:COPR_PSESM (EMBL:L05176) Pseudomonas syringae transcriptional activator protein CopR%2C 227 aa%3B fasta scores: opt: 610 z-score: 735.3 E(): 0%3B 42.7%25 identity in 227 aa overlap and to TR:O53894 (EMBL:AL021999) Mycobacterium tuberculosis two-component response regulator MTV044.09%2C 230 aa%3B fasta scores: opt: 933 z-score: 1119.0 E(): 0%3B 62.9%25 identity in 229 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=SCD84.23c;product=two-component systen response regulator;protein_id=NP_628333.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4573143	4573358	.	-	.	ID=id5208;Dbxref=GeneID:1099596;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 104.00%2C E-value 8.4e-30;gbkey=misc_feature;gene=SCD84.23c
NC_003888.3	RefSeq	sequence_feature	4573482	4573817	.	-	.	ID=id5209;Dbxref=GeneID:1099596;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 161.40%2C E-value 1.5e-44;gbkey=misc_feature;gene=SCD84.23c
NC_003888.3	RefSeq	gene	4573948	4574991	.	-	.	ID=gene4203;Dbxref=GeneID:1099597;Name=SCD84.24c;gbkey=Gene;gene=SCD84.24c;gene_biotype=protein_coding;gene_synonym=SCD84.24c;locus_tag=SCO4157
NC_003888.3	RefSeq	CDS	4573948	4574991	.	-	0	ID=cds4110;Parent=gene4203;Dbxref=Genbank:NP_628334.1,GeneID:1099597;Name=NP_628334.1;Note=SCD84.24c%2C probable protease%2C len: 347 aa%3B similar to C-terminal region of TR:O06291(EMBL:Z98260) Mycobacterium tuberculosis HtrA%2C 549 aa%3B fasta scores: opt: 426 z-score: 370.9 E(): 3.4e-13%3B 38.4%25 identity in 328 aa overlap and C-terminal region similar to C-terminal region of SW:HTRA_ECOLI (EMBL:M36536) Escherichia coli protease do precursor HtrA%2C 474 aa%3B fasta scores: opt: 329 z-score: 290.0 E(): 1.1e-08%3B 42.7%25 identity in 199 aa overlap. Contains 2x Pfam match to entry PF00089 trypsin%2C Trypsin. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD84.24c;product=protease;protein_id=NP_628334.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4573978	4574151	.	-	.	ID=id5210;Dbxref=GeneID:1099597;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 20.60%2C E-value 1.1e-05;gbkey=misc_feature;gene=SCD84.24c
NC_003888.3	RefSeq	sequence_feature	4574275	4574655	.	-	.	ID=id5211;Dbxref=GeneID:1099597;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 30.20%2C E-value 1e-08;gbkey=misc_feature;gene=SCD84.24c
NC_003888.3	RefSeq	gene	4575112	4576134	.	-	.	ID=gene4204;Dbxref=GeneID:1099598;Name=SCD84.25c;gbkey=Gene;gene=SCD84.25c;gene_biotype=protein_coding;gene_synonym=SCD84.25c;locus_tag=SCO4158
NC_003888.3	RefSeq	CDS	4575112	4576134	.	-	0	ID=cds4111;Parent=gene4204;Dbxref=Genbank:NP_628335.1,GeneID:1099598;Name=NP_628335.1;Note=SCD84.25c%2C probable LacI-family regulatory protein%2C len: 340 aa%3B similar to TR:CAB66206 (EMBL:AL136502) Streptomyces coelicolor LacI-family transcriptional regulatory protein SCF43.17c%2C 341 aa%3B fasta scores: opt: 572 z-score: 669.2 E(): 8e-30%3B 37.3%25 identity in 338 aa overlap and to SW:CCPA_BACME (EMBL:L26052) Bacillus megaterium glucose-resistance amylase regulator (catabolite control protein) CcpA%2C 332 aa%3B fasta scores: opt: 564 z-score: 660.1 E(): 2.6e-29%3B 34.3%25 identity in 309 aa overlap. Contains Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and possible helix-turn-helix motif at residues 4..25 (+4.58 SD);gbkey=CDS;gene=SCD84.25c;product=LacI-family regulatory protein;protein_id=NP_628335.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4575220	4575954	.	-	.	ID=id5212;Dbxref=GeneID:1099598;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 93.50%2C E-value 4.1e-24;gbkey=misc_feature;gene=SCD84.25c
NC_003888.3	RefSeq	sequence_feature	4575935	4577616	.	-	.	ID=id5213;Note=previously sequenced fragment EMBL:L03213 Streptomyces coelicolor transcription factor (glnR) gene%2C complete cds%3B lac repressor-like protein%2C 5' end.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4576177	4576980	.	-	.	ID=gene4205;Dbxref=GeneID:1099599;Name=glnR;gbkey=Gene;gene=glnR;gene_biotype=protein_coding;gene_synonym=glnR,SCD84.26c;locus_tag=SCO4159
NC_003888.3	RefSeq	CDS	4576177	4576980	.	-	0	ID=cds4112;Parent=gene4205;Dbxref=Genbank:NP_628336.1,GeneID:1099599;Name=NP_628336.1;Note=SCD84.26c%2C glnR%2C transcriptional regulatory protein%2C len: 267 aa%3B identical to previously sequenced SW:GLNR_STRCO (EMBL:L03213) Streptomyces coelicolor transcriptional regulatory protein GlnR. Contains Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=glnR;product=transcriptional regulator;protein_id=NP_628336.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4576333	4576545	.	-	.	ID=id5214;Dbxref=GeneID:1099599;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 132.50%2C E-value 2.4e-38;gbkey=misc_feature;gene=glnR
NC_003888.3	RefSeq	gene	4577223	4578059	.	+	.	ID=gene4206;Dbxref=GeneID:1099600;Name=SCD84.27;gbkey=Gene;gene=SCD84.27;gene_biotype=protein_coding;gene_synonym=SCD84.27;locus_tag=SCO4160
NC_003888.3	RefSeq	CDS	4577223	4578059	.	+	0	ID=cds4113;Parent=gene4206;Dbxref=Genbank:NP_628337.1,GeneID:1099600;Name=NP_628337.1;Note=SCD84.27%2C possible hydrolase%2C len: 278 aa%3B similar to TR:AAF25687 (EMBL:AF218823) Thermomonospora fusca dienelactone hydrolase DlhA%2C 265 aa%3B fasta scores: opt: 786 z-score: 885.1 E(): 0%3B 50.0%25 identity in 262 aa overlap;gbkey=CDS;gene=SCD84.27;product=hydrolase;protein_id=NP_628337.1;transl_table=11
NC_003888.3	RefSeq	gene	4578096	4578350	.	+	.	ID=gene4207;Dbxref=GeneID:1099601;Name=SCD84.28;gbkey=Gene;gene=SCD84.28;gene_biotype=protein_coding;gene_synonym=SCD84.28;locus_tag=SCO4161
NC_003888.3	RefSeq	CDS	4578096	4578350	.	+	0	ID=cds4114;Parent=gene4207;Dbxref=Genbank:NP_628338.1,GeneID:1099601;Name=NP_628338.1;Note=SCD84.28%2C possible molybdopterin converting factor%2C len: 84 aa%3B similar to TR:O53880 (EMBL:AL022004) Mycobacterium tuberculosis molybdopterin converting factor (subunit 1) MoaD-2%2C 92 aa%3B fasta scores: opt: 191 z-score: 269.0 E(): 1.6e-07%3B 45.9%25 identity in 85 aa overlap;gbkey=CDS;gene=SCD84.28;product=molybdopterin converting factor;protein_id=NP_628338.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4578341	4578346	.	+	.	ID=id5215;Dbxref=GeneID:1099601;gbkey=RBS;gene=SCD84.28
NC_003888.3	RefSeq	gene	4578354	4579667	.	+	.	ID=gene4208;Dbxref=GeneID:1099602;Name=SCD84.29;gbkey=Gene;gene=SCD84.29;gene_biotype=protein_coding;gene_synonym=SCD84.29;locus_tag=SCO4162
NC_003888.3	RefSeq	CDS	4578354	4579667	.	+	0	ID=cds4115;Parent=gene4208;Dbxref=Genbank:NP_628339.1,GeneID:1099602;Name=NP_628339.1;Note=SCD84.29%2C possible integral membrane protein%2C len: 437 aa. High content in alanine%2C proline%2C glycine and glutamine amino acid residues. Contains possible hydrophobic membrane spanning domains in C-terminal region and degenerate amino acid repeat: 6x (R/P/Q)YDP(N/G) in N-terminal region;gbkey=CDS;gene=SCD84.29;product=hypothetical protein;protein_id=NP_628339.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4578375	4578479	.	+	.	ID=id5216;Dbxref=GeneID:1099602;Note=degenerate repeat 6x (R/Q/P)YDP(N/G);gbkey=repeat_region;gene=SCD84.29
NC_003888.3	RefSeq	gene	4579824	4580561	.	+	.	ID=gene4209;Dbxref=GeneID:1099603;Name=SCD84.30;gbkey=Gene;gene=SCD84.30;gene_biotype=protein_coding;gene_synonym=SCD84.30;locus_tag=SCO4163
NC_003888.3	RefSeq	CDS	4579824	4580561	.	+	0	ID=cds4116;Parent=gene4209;Dbxref=Genbank:NP_628340.1,GeneID:1099603;Name=NP_628340.1;Note=SCD84.30%2C possible hypothetical protein%2C len: 245 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD84.30;product=hypothetical protein;protein_id=NP_628340.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4580983	4580989	.	+	.	ID=id5217;gbkey=RBS
NC_003888.3	RefSeq	gene	4580995	4581840	.	+	.	ID=gene4210;Dbxref=GeneID:1099604;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;gene_synonym=cysA,SCD66.01,SCD84.31;locus_tag=SCO4164
NC_003888.3	RefSeq	CDS	4580995	4581840	.	+	0	ID=cds4117;Parent=gene4210;Dbxref=Genbank:NP_733629.1,GeneID:1099604;Name=NP_733629.1;Note=SCD66.01%2C probable thiosulfate sulfurtransferase (fragment)%2C len: >168 aa%3B highly similar to SW:THTR_SACER (EMBL:M29612) Saccharopolyspora erythraea thiosulfate sulfurtransferase (EC 2.8.1.1) CysA%2C 281 aa%3B fasta scores: opt: 817 z-score: 966.7 E(): 0%3B 74.8%25 identity in 163 aa overlap and similar to SW:THTR_ECOLI (EMBL:D10496) Escherichia coli thiosulfate sulfurtransferase (EC 2.8.1.1) SseA%2C 280 aa%3B fasta scores: opt: 225 z-score: 273.5 E(): 9.2e-08%3B 28.2%25 identity in 163 aa overlap. Contains Pfam match to entry PF00581 Rhodanese%2C Rhodanese-like domain and match to Prosite entry PS00683 Rhodanese C-terminal signature~SCD84.31%2C cysA%2C thiosulfate sulfurtransferase (fragment)%2C len: >145 aa%3B highly similar to SW:THTR_SACE (EMBL:M29612) Saccharopolyspora erythraea thiosulfate sulfurtransferase (EC 2.8.1.1) (rhodanase-like protein) CysA%2C 281 aa%3B fasta scores: opt: 662 z-score: 820.8 E(): 0%3B 65.5%25 identity in 145 aa overlap. Contains Pfam match to entry PF00581 Rhodanese%2C Rhodanese-like domain;gbkey=CDS;gene=cysA;product=thiosulfate sulfurtransferase;protein_id=NP_733629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4581019	4581351	.	+	.	ID=id5218;Dbxref=GeneID:1099604;Note=Pfam match to entry PF00581 Rhodanese%2C Rhodanese-like domain%2C score 95.20%2C E-value 1.3e-24;gbkey=misc_feature;gene=cysA
NC_003888.3	RefSeq	sequence_feature	4581439	4581804	.	+	.	ID=id5219;Dbxref=GeneID:1099604;Note=Pfam match to entry PF00581 Rhodanese%2C Rhodanese-like domain%2C score 90.00%2C E-value 4.8e-23;gbkey=misc_feature;gene=cysA
NC_003888.3	RefSeq	sequence_feature	4581763	4581795	.	+	.	ID=id5220;Dbxref=GeneID:1099604;Note=PS00683 Rhodanese C-terminal signature;gbkey=misc_feature;gene=cysA
NC_003888.3	RefSeq	ribosome_entry_site	4581863	4581867	.	+	.	ID=id5221;gbkey=RBS
NC_003888.3	RefSeq	gene	4581874	4582161	.	+	.	ID=gene4211;Dbxref=GeneID:1099605;Name=SCD66.02;gbkey=Gene;gene=SCD66.02;gene_biotype=protein_coding;gene_synonym=SCD66.02;locus_tag=SCO4165
NC_003888.3	RefSeq	CDS	4581874	4582161	.	+	0	ID=cds4118;Parent=gene4211;Dbxref=Genbank:NP_628341.1,GeneID:1099605;Name=NP_628341.1;Note=SCD66.02%2C conserved hypothetical protein%2C len: 95 aa%3B similar to TR:Q54084 (EMBL:M29612) Saccharopolyspora erythraea hypothetical 10.2 kD protein%2C 101 aa%3B fasta scores: opt: 255 z-score: 316.1 E(): 3.9e-10%3B 46.3%25 identity in 95 aa overlap;gbkey=CDS;gene=SCD66.02;product=hypothetical protein;protein_id=NP_628341.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	4582173	4582225	.	+	.	ID=id5222;Note=841 GCCGAAGGGGCCGCACCC 858 - 876 GGGTGCGGCCCCTTCGGC 893. Score 54: 18/18 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4582226	4582519	.	+	.	ID=gene4212;Dbxref=GeneID:1099606;Name=SCD66.03;gbkey=Gene;gene=SCD66.03;gene_biotype=protein_coding;gene_synonym=SCD66.03;locus_tag=SCO4166
NC_003888.3	RefSeq	CDS	4582226	4582519	.	+	0	ID=cds4119;Parent=gene4212;Dbxref=Genbank:NP_628342.1,GeneID:1099606;Name=NP_628342.1;Note=SCD66.03%2C possible integral membrane protein%2C len: 97 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD66.03;product=hypothetical protein;protein_id=NP_628342.1;transl_table=11
NC_003888.3	RefSeq	gene	4582548	4583216	.	-	.	ID=gene4213;Dbxref=GeneID:1099607;Name=SCD66.04c;gbkey=Gene;gene=SCD66.04c;gene_biotype=protein_coding;gene_synonym=SCD66.04c;locus_tag=SCO4167
NC_003888.3	RefSeq	CDS	4582548	4583216	.	-	0	ID=cds4120;Parent=gene4213;Dbxref=Genbank:NP_628343.1,GeneID:1099607;Name=NP_628343.1;Note=SCD66.04c%2C probable tetR-family transcriptional regulator%2C len: 222 aa%3B similar to TR:CAB90985 (EMBL:AL355832) Streptomyces coelicolor tetR-family transcriptional regulator SCE22.18c%2C 236 aa%3B fasta scores: opt: 436 z-score: 494.2 E(): 4.7e-20%3B 42.3%25 identity in 208 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and helix-turn-helix motif at residues 50..71 (+5.15 SD);gbkey=CDS;gene=SCD66.04c;product=TetR family transcriptional regulator;protein_id=NP_628343.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4582992	4583117	.	-	.	ID=id5223;Dbxref=GeneID:1099607;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 59.70%2C E-value 6.5e-14;gbkey=misc_feature;gene=SCD66.04c
NC_003888.3	RefSeq	gene	4583238	4584065	.	+	.	ID=gene4214;Dbxref=GeneID:1099608;Name=SCD66.05;gbkey=Gene;gene=SCD66.05;gene_biotype=protein_coding;gene_synonym=SCD66.05;locus_tag=SCO4168
NC_003888.3	RefSeq	CDS	4583238	4584065	.	+	0	ID=cds4121;Parent=gene4214;Dbxref=Genbank:NP_628344.1,GeneID:1099608;Name=NP_628344.1;Note=SCD66.05%2C probable oxidoreductase%2C len: 275 aa%3B similar to TR:BAA95121 (EMBL:AB042262) Corynebacterium aquaticum levodione reductase Lvr%2C 267 aa%3B fasta scores: opt: 477 z-score: 478.6 E(): 3.5e-19%3B 37.3%25 identity in 260 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCD66.05;product=oxidoreductase;protein_id=NP_628344.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4583298	4583852	.	+	.	ID=id5224;Dbxref=GeneID:1099608;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 180.40%2C E-value 2.9e-50;gbkey=misc_feature;gene=SCD66.05
NC_003888.3	RefSeq	sequence_feature	4583703	4583789	.	+	.	ID=id5225;Dbxref=GeneID:1099608;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCD66.05
NC_003888.3	RefSeq	sequence_feature	4583952	4584044	.	+	.	ID=id5226;Dbxref=GeneID:1099608;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 18.70%2C E-value 0.0015;gbkey=misc_feature;gene=SCD66.05
NC_003888.3	RefSeq	gene	4584106	4584870	.	+	.	ID=gene4215;Dbxref=GeneID:1099609;Name=SCD66.06;gbkey=Gene;gene=SCD66.06;gene_biotype=protein_coding;gene_synonym=SCD66.06;locus_tag=SCO4169
NC_003888.3	RefSeq	CDS	4584106	4584870	.	+	0	ID=cds4122;Parent=gene4215;Dbxref=Genbank:NP_628345.1,GeneID:1099609;Name=NP_628345.1;Note=SCD66.06%2C probable oxidoreductase%2C len: 254 aa%3B similar to SW:2BHD_STREX Streptomyces exfoliatus 20-beta-hydroxysteroid dehydrogenase (EC 1.1.1.53)%2C 255 aa%3B fasta scores: opt: 1285 z-score: 1410.5 E(): 0%3B 77.6%25 identity in 255 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCD66.06;product=oxidoreductase;protein_id=NP_628345.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4584124	4584669	.	+	.	ID=id5227;Dbxref=GeneID:1099609;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 264.80%2C E-value 1.1e-75;gbkey=misc_feature;gene=SCD66.06
NC_003888.3	RefSeq	sequence_feature	4584520	4584606	.	+	.	ID=id5228;Dbxref=GeneID:1099609;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCD66.06
NC_003888.3	RefSeq	sequence_feature	4584727	4584819	.	+	.	ID=id5229;Dbxref=GeneID:1099609;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 57.60%2C E-value 9.8e-15;gbkey=misc_feature;gene=SCD66.06
NC_003888.3	RefSeq	gene	4584935	4585840	.	+	.	ID=gene4216;Dbxref=GeneID:1099610;Name=SCD66.07;gbkey=Gene;gene=SCD66.07;gene_biotype=protein_coding;gene_synonym=SCD66.07;locus_tag=SCO4170
NC_003888.3	RefSeq	CDS	4584935	4585840	.	+	0	ID=cds4123;Parent=gene4216;Dbxref=Genbank:NP_628346.1,GeneID:1099610;Name=NP_628346.1;Note=SCD66.07%2C possible membrane protein%2C len: 301 aa. Contains possible hydrophobic membrane spanning region and high content in alanine amino acid residues;gbkey=CDS;gene=SCD66.07;product=hypothetical protein;protein_id=NP_628346.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4585828	4585831	.	+	.	ID=id5230;Dbxref=GeneID:1099610;gbkey=RBS;gene=SCD66.07
NC_003888.3	RefSeq	gene	4585837	4586589	.	+	.	ID=gene4217;Dbxref=GeneID:1099611;Name=SCD66.08;gbkey=Gene;gene=SCD66.08;gene_biotype=protein_coding;gene_synonym=SCD66.08;locus_tag=SCO4171
NC_003888.3	RefSeq	CDS	4585837	4586589	.	+	0	ID=cds4124;Parent=gene4217;Dbxref=Genbank:NP_628347.1,GeneID:1099611;Name=NP_628347.1;Note=SCD66.08%2C possible hypothetical protein%2C len: 250 aa. Contains possible N-terminal region signal peptide sequence and high content in alanine and glycine amino acid residues;gbkey=CDS;gene=SCD66.08;product=hypothetical protein;protein_id=NP_628347.1;transl_table=11
NC_003888.3	RefSeq	gene	4586586	4587461	.	+	.	ID=gene4218;Dbxref=GeneID:1099612;Name=SCD66.09;gbkey=Gene;gene=SCD66.09;gene_biotype=protein_coding;gene_synonym=SCD66.09;locus_tag=SCO4172
NC_003888.3	RefSeq	CDS	4586586	4587461	.	+	0	ID=cds4125;Parent=gene4218;Dbxref=Genbank:NP_628348.1,GeneID:1099612;Name=NP_628348.1;Note=SCD66.09%2C possible membrane protein%2C len: 291 aa. Contains possible hydrophobic membrane spanning region and high content in alanine amino acid residues;gbkey=CDS;gene=SCD66.09;product=hypothetical protein;protein_id=NP_628348.1;transl_table=11
NC_003888.3	RefSeq	gene	4587481	4587828	.	-	.	ID=gene4219;Dbxref=GeneID:1099613;Name=SCD66.10c;gbkey=Gene;gene=SCD66.10c;gene_biotype=protein_coding;gene_synonym=SCD66.10c;locus_tag=SCO4173
NC_003888.3	RefSeq	CDS	4587481	4587828	.	-	0	ID=cds4126;Parent=gene4219;Dbxref=Genbank:NP_628349.1,GeneID:1099613;Name=NP_628349.1;Note=SCD66.10c%2C unknown%2C len: 115 aa;gbkey=CDS;gene=SCD66.10c;product=hypothetical protein;protein_id=NP_628349.1;transl_table=11
NC_003888.3	RefSeq	gene	4587872	4588123	.	-	.	ID=gene4220;Dbxref=GeneID:1099614;Name=SCD66.11c;gbkey=Gene;gene=SCD66.11c;gene_biotype=protein_coding;gene_synonym=SCD66.11c;locus_tag=SCO4174
NC_003888.3	RefSeq	CDS	4587872	4588123	.	-	0	ID=cds4127;Parent=gene4220;Dbxref=Genbank:NP_628350.1,GeneID:1099614;Name=NP_628350.1;Note=SCD66.11c%2C possible integral membrane protein%2C len: 83 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD66.11c;product=hypothetical protein;protein_id=NP_628350.1;transl_table=11
NC_003888.3	RefSeq	gene	4588120	4588512	.	-	.	ID=gene4221;Dbxref=GeneID:1099615;Name=SCD66.12c;gbkey=Gene;gene=SCD66.12c;gene_biotype=protein_coding;gene_synonym=SCD66.12c;locus_tag=SCO4175
NC_003888.3	RefSeq	CDS	4588120	4588512	.	-	0	ID=cds4128;Parent=gene4221;Dbxref=Genbank:NP_628351.1,GeneID:1099615;Name=NP_628351.1;Note=SCD66.12c%2C hypothetical protein%2C len: 130 aa%3B similar to TR:CAB69732 (EMBL:AL137166) Streptomyces coelicolor hypothetical 7.8 kD protein%2C 73 aa%3B fasta scores: opt: 180 z-score: 223.4 E(): 5.7e-05%3B 43.7%25 identity in 71 aa overlap;gbkey=CDS;gene=SCD66.12c;product=hypothetical protein;protein_id=NP_628351.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4588125	4588128	.	-	.	ID=id5231;Dbxref=GeneID:1099615;gbkey=RBS;gene=SCD66.12c
NC_003888.3	RefSeq	ribosome_entry_site	4588520	4588523	.	-	.	ID=id5232;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4588673	4588677	.	+	.	ID=id5233;gbkey=RBS
NC_003888.3	RefSeq	gene	4588684	4589526	.	+	.	ID=gene4222;Dbxref=GeneID:1099616;Name=SCD66.13;gbkey=Gene;gene=SCD66.13;gene_biotype=protein_coding;gene_synonym=SCD66.13;locus_tag=SCO4176
NC_003888.3	RefSeq	CDS	4588684	4589526	.	+	0	ID=cds4129;Parent=gene4222;Dbxref=Genbank:NP_628352.1,GeneID:1099616;Name=NP_628352.1;Note=SCD66.13%2C conserved hypothetical protein%2C len: 280 aa%3B similar to TR:O86676 (EMBL:AL031371) Streptomyces coelicolor hypothetical 30.7 kD protein SC4G2.03%2C 277 aa%3B fasta scores: opt: 378 z-score: 466.2 E(): 1.7e-18%3B 31.7%25 identity in 262 aa overlap;gbkey=CDS;gene=SCD66.13;product=hypothetical protein;protein_id=NP_628352.1;transl_table=11
NC_003888.3	RefSeq	gene	4589532	4589801	.	+	.	ID=gene4223;Dbxref=GeneID:1099617;Name=SCD66.14;gbkey=Gene;gene=SCD66.14;gene_biotype=protein_coding;gene_synonym=SCD66.14;locus_tag=SCO4177
NC_003888.3	RefSeq	CDS	4589532	4589801	.	+	0	ID=cds4130;Parent=gene4223;Dbxref=Genbank:NP_628353.1,GeneID:1099617;Name=NP_628353.1;Note=SCD66.14%2C conserved hypothetical protein%2C len: 89 aa%3B similar to TR:CAB69735 (EMBL:AL137166) Streptomyces coelicolor hypothetical 10.2 kD protein SCC121.17%2C 96 aa%3B fasta scores: opt: 288 z-score: 395.7 E(): 1.4e-14%3B 50.0%25 identity in 78 aa overlap. Contains 2x degenerate repeat units: WRRSSYSN;gbkey=CDS;gene=SCD66.14;product=hypothetical protein;protein_id=NP_628353.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4589538	4589561	.	+	.	ID=id5234;Dbxref=GeneID:1099617;Note=degenerate repeat translated in SCD66.14;gbkey=repeat_region;gene=SCD66.14
NC_003888.3	RefSeq	repeat_region	4589616	4589639	.	+	.	ID=id5235;Dbxref=GeneID:1099617;Note=degenerate repeat translated in SCD66.14;gbkey=repeat_region;gene=SCD66.14
NC_003888.3	RefSeq	ribosome_entry_site	4589835	4589839	.	+	.	ID=id5236;gbkey=RBS
NC_003888.3	RefSeq	gene	4589846	4589944	.	+	.	ID=gene4224;Dbxref=GeneID:1099618;Name=SCD66.15;gbkey=Gene;gene=SCD66.15;gene_biotype=protein_coding;gene_synonym=SCD66.15;locus_tag=SCO4178
NC_003888.3	RefSeq	CDS	4589846	4589944	.	+	0	ID=cds4131;Parent=gene4224;Dbxref=Genbank:NP_628354.1,GeneID:1099618;Name=NP_628354.1;Note=SCD66.15%2C small membrane protein%2C len: 32 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD66.15;product=small membrane protein;protein_id=NP_628354.1;transl_table=11
NC_003888.3	RefSeq	gene	4589970	4590545	.	+	.	ID=gene4225;Dbxref=GeneID:1099619;Name=SCD66.16;gbkey=Gene;gene=SCD66.16;gene_biotype=protein_coding;gene_synonym=SCD66.16;locus_tag=SCO4179
NC_003888.3	RefSeq	CDS	4589970	4590545	.	+	0	ID=cds4132;Parent=gene4225;Dbxref=Genbank:NP_628355.1,GeneID:1099619;Name=NP_628355.1;Note=SCD66.16%2C hypothetical protein%2C len: 191 aa%3B similar to TR:O53827 (EMBL:AL022004) Mycobacterium tuberculosis hypothetical 23.9 kD protein MTV043.05c%2C 226 aa%3B fasta scores: opt: 320 z-score: 391.4 E(): 2.5e-14%3B 34.9%25 identity in 169 aa overlap;gbkey=CDS;gene=SCD66.16;product=hypothetical protein;protein_id=NP_628355.1;transl_table=11
NC_003888.3	RefSeq	gene	4590561	4590998	.	+	.	ID=gene4226;Dbxref=GeneID:1099620;Name=SCD66.17;gbkey=Gene;gene=SCD66.17;gene_biotype=protein_coding;gene_synonym=SCD66.17;locus_tag=SCO4180
NC_003888.3	RefSeq	CDS	4590561	4590998	.	+	0	ID=cds4133;Parent=gene4226;Dbxref=Genbank:NP_628356.1,GeneID:1099620;Name=NP_628356.1;Note=SCD66.17%2C probable iron uptake regulatory protein%2C len: 145 aa%3B similar to SW:FUR_CAMJE (EMBL:X78965) Campylobacter jejuni ferric uptake regulation protein Fur%2C 157 aa%3B fasta scores: opt: 274 z-score: 366.6 E(): 6e-13%3B 31.9%25 identity in 135 aa overlap. Contains Pfam match to entry PF01475 FUR%2C Ferric uptake regulator family;gbkey=CDS;gene=SCD66.17;product=iron uptake regulatory protein;protein_id=NP_628356.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4590594	4590950	.	+	.	ID=id5237;Dbxref=GeneID:1099620;Note=Pfam match to entry PF01475 FUR%2C Ferric uptake regulator family%2C score 68.10%2C E-value 1.8e-16;gbkey=misc_feature;gene=SCD66.17
NC_003888.3	RefSeq	gene	4591019	4591984	.	+	.	ID=gene4227;Dbxref=GeneID:1099621;Name=SCD66.18;gbkey=Gene;gene=SCD66.18;gene_biotype=protein_coding;gene_synonym=SCD66.18;locus_tag=SCO4181
NC_003888.3	RefSeq	CDS	4591019	4591984	.	+	0	ID=cds4134;Parent=gene4227;Dbxref=Genbank:NP_628357.1,GeneID:1099621;Name=NP_628357.1;Note=SCD66.18%2C conserved hypothetical protein%2C len: 321 aa%3B similar to TR:Q9RHX9 (EMBL:AB003158) Corynebacterium ammoniagenes ORF4%2C 359 aa%3B fasta scores: opt: 368 z-score: 441.2 E(): 4.2e-17%3B 38.9%25 identity in 319 aa overlap. Contains Pfam match to entry PF01571 GCV_T%2C Glycine cleavage T-protein (aminomethyl transferase);gbkey=CDS;gene=SCD66.18;product=hypothetical protein;protein_id=NP_628357.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4591139	4591981	.	+	.	ID=id5238;Dbxref=GeneID:1099621;Note=Pfam match to entry PF01571 GCV_T%2C Glycine cleavage T-protein (aminomethyl transferase)%2C score -145.40%2C E-value 0.009;gbkey=misc_feature;gene=SCD66.18
NC_003888.3	RefSeq	gene	4592011	4592436	.	-	.	ID=gene4228;Dbxref=GeneID:1099622;Name=SCD66.19c;gbkey=Gene;gene=SCD66.19c;gene_biotype=protein_coding;gene_synonym=SCD66.19c;locus_tag=SCO4182
NC_003888.3	RefSeq	CDS	4592011	4592436	.	-	0	ID=cds4135;Parent=gene4228;Dbxref=Genbank:NP_628358.1,GeneID:1099622;Name=NP_628358.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;gene=SCD66.19c;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=NP_628358.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4592457	4592501	.	-	.	ID=id5239;Note=inverted and repeated degenerately at 12154-12198 bp;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4592459	4593478	.	-	.	ID=gene4229;Dbxref=GeneID:1099623;Name=SCD66.20c;gbkey=Gene;gene=SCD66.20c;gene_biotype=protein_coding;gene_synonym=SCD66.20c;locus_tag=SCO4183
NC_003888.3	RefSeq	CDS	4592459	4593478	.	-	0	ID=cds4136;Parent=gene4229;Dbxref=Genbank:NP_628359.1,GeneID:1099623;Name=NP_628359.1;Note=SCD66.20c%2C probable transposase%2C len: 339 aa%3B identical to TR:CAB71807 (EMBL:AL138662) Streptomyces coelicolor transposase SC8E4.02%2C 339 aa;gbkey=CDS;gene=SCD66.20c;product=transposase;protein_id=NP_628359.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4593396	4594879	.	+	.	ID=id5240;Note=previously sequenced DNA fragment EMBL:D63677 Streptomyces coelicolor amfC gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	4593486	4593530	.	-	.	ID=id5241;Note=inverted and repeated degenerately at 11125-11169 bp;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4593681	4594349	.	+	.	ID=gene4230;Dbxref=GeneID:1099624;Name=amfC;gbkey=Gene;gene=amfC;gene_biotype=protein_coding;gene_synonym=amfC,SCD66.21;locus_tag=SCO4184
NC_003888.3	RefSeq	CDS	4593681	4594349	.	+	0	ID=cds4137;Parent=gene4230;Dbxref=Genbank:NP_628360.1,GeneID:1099624;Name=NP_628360.1;Note=SCD66.21%2C amfC%2C aerial mycelium formation%2C len: 222 aa%3B identical to previously sequenced TR:Q54191 (EMBL:D63677) Streptomyces coelicolor aerial micelium formation AmfC%2C 222 aa;gbkey=CDS;gene=amfC;product=aerial mycelium formation protein;protein_id=NP_628360.1;transl_table=11
NC_003888.3	RefSeq	gene	4594466	4595476	.	+	.	ID=gene4231;Dbxref=GeneID:1099625;Name=SCD66.22;gbkey=Gene;gene=SCD66.22;gene_biotype=protein_coding;gene_synonym=SCD66.22;locus_tag=SCO4185
NC_003888.3	RefSeq	CDS	4594466	4595476	.	+	0	ID=cds4138;Parent=gene4231;Dbxref=Genbank:NP_628361.1,GeneID:1099625;Name=NP_628361.1;Note=SCD66.22%2C conserved hypothetical protein%2C len: 336 aa%3B highly similar to TR:Q54237 (EMBL:D63706) Streptomyces griseus ORF4 hypothetical protein%2C 328 aa%3B fasta scores: opt: 1654 z-score: 1801.0 E(): 0%3B 78.6%25 identity in 322 aa overlap and N-terminal domain identical to TR:Q9Z4H1 (EMBL:D63677) Streptomyces coelicolor ORF4 hypothetical protein (fragment)%2C 142 aa. Contains 3x degenerate repeat at N-terminal domain: PS(H/Q);gbkey=CDS;gene=SCD66.22;product=hypothetical protein;protein_id=NP_628361.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4594472	4594498	.	+	.	ID=id5242;Dbxref=GeneID:1099625;Note=degenerate repeat translated in SCD66.22;gbkey=repeat_region;gene=SCD66.22
NC_003888.3	RefSeq	repeat_region	4595495	4595541	.	+	.	ID=id5243;Note=3x conserved repeat: TCCTTCGGGGTCCGG-;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4595605	4596861	.	+	.	ID=gene4232;Dbxref=GeneID:1099626;Name=SCD66.23;gbkey=Gene;gene=SCD66.23;gene_biotype=protein_coding;gene_synonym=SCD66.23;locus_tag=SCO4186
NC_003888.3	RefSeq	CDS	4595605	4596861	.	+	0	ID=cds4139;Parent=gene4232;Dbxref=Genbank:NP_628362.1,GeneID:1099626;Name=NP_628362.1;Note=SCD66.23%2C conserved hypothetical protein%2C len: 418 aa%3B highly similar to TR:Q54238 (EMBL:D63706%3B) Streptomyces griseus hypothetical protein ORF5%2C 416 aa%3B fasta scores: opt: 1720 z-score: 2020.0 E(): 0%3B 62.6%25 identity in 414 aa overlap;gbkey=CDS;gene=SCD66.23;product=hypothetical protein;protein_id=NP_628362.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4596931	4596976	.	+	.	ID=id5244;Note=6x degenerate repeat: GT(T/G)GTG;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4597040	4597225	.	-	.	ID=gene4233;Dbxref=GeneID:1099627;Name=2SCD46.01c;gbkey=Gene;gene=2SCD46.01c;gene_biotype=protein_coding;gene_synonym=2SCD46.01c,SCD66.24c;locus_tag=SCO4187
NC_003888.3	RefSeq	CDS	4597040	4597225	.	-	0	ID=cds4140;Parent=gene4233;Dbxref=Genbank:NP_733630.1,GeneID:1099627;Name=NP_733630.1;Note=2SCD46.01c%2C membrane protein%2C partial CDS%2C len: >45aa%3B strongly similar to neighbouring CDS 2SCD46.03c fasta scores%3B opt: 169%2C z-score: 236.7%2C E(): 1.4e-07%2C 51.1%25 identity in 45 aa overlap. Hydrophobic. Contains possible hydrophobic membrane spanning regions~SCD66.24c%2C membrane protein (fragment)%2C len: >48 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCD46.01c;product=hypothetical protein;protein_id=NP_733630.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4597091	4598290	.	+	.	ID=id5245;Note=Repeated degenerately at 1210..2414. This DNA repeat manifests as a duplication of a pairs of CDSs such that 2SCD46.01c is similar to 2SCD46.03c and 2SCD46.02 is similar to 2SCD46.04.;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	4597232	4597237	.	-	.	ID=id5246;gbkey=RBS
NC_003888.3	RefSeq	gene	4597379	4598290	.	+	.	ID=gene4234;Dbxref=GeneID:1099628;Name=2SCD46.02;gbkey=Gene;gene=2SCD46.02;gene_biotype=protein_coding;gene_synonym=2SCD46.02;locus_tag=SCO4188
NC_003888.3	RefSeq	CDS	4597379	4598290	.	+	0	ID=cds4141;Parent=gene4234;Dbxref=Genbank:NP_628363.1,GeneID:1099628;Name=NP_628363.1;Note=2SCD46.02%2C possible GntR-family transcriptional regulator%2C len: 303aa%3B similar to many eg. TR:Q9RIQ2 (EMBL:AJ243257) KorA protein from plasmid pSNA1 of Streptomyces natalensis (245 aa) fasta scores%3B opt: 175%2C z-score: 204.2%2C E(): 0.00069%2C 28.2%25 identity in 238 aa overlap. Also strongly similar to neighbouring CDS 2SCD46.04 fasta scores%3B opt: 1074%2C z-score: 984.2%2C E(): 0%2C 57.6%25 identity in 302 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and helix-turn-helix motif (Score 1967 (+5.89 SD)) at residue 46-67. Note possible alternative downstream translational start codons.;gbkey=CDS;gene=2SCD46.02;product=GntR family transcriptional regulator;protein_id=NP_628363.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4597454	4597636	.	+	.	ID=id5247;Dbxref=GeneID:1099628;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 64.70%2C E-value 1.9e-18;gbkey=misc_feature;gene=2SCD46.02
NC_003888.3	RefSeq	repeat_region	4598300	4599504	.	+	.	ID=id5248;Note=Repeated degenerately at 1210..2414. This DNA repeat manifests as a duplication of a pairs of CDSs such that 2SCD46.01c is similar to 2SCD46.03c and 2SCD46.02 is similar to 2SCD46.04.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4598300	4598488	.	-	.	ID=gene4235;Dbxref=GeneID:1099629;Name=2SCD46.03c;gbkey=Gene;gene=2SCD46.03c;gene_biotype=protein_coding;gene_synonym=2SCD46.03c;locus_tag=SCO4189
NC_003888.3	RefSeq	CDS	4598300	4598488	.	-	0	ID=cds4142;Parent=gene4235;Dbxref=Genbank:NP_628364.1,GeneID:1099629;Name=NP_628364.1;Note=2SCD46.03c%2C unknown%2C len: 62aa%3B strongly similar to neighbouring CDS 2SCD46.03c fasta scores%3B opt: 169%2C z-score: 236.7%2C E(): 1.4e-07%2C 51.1%25 identity in 45 aa overlap. Hydrophobic.;gbkey=CDS;gene=2SCD46.03c;product=hypothetical protein;protein_id=NP_628364.1;transl_table=11
NC_003888.3	RefSeq	gene	4598629	4599504	.	+	.	ID=gene4236;Dbxref=GeneID:1099630;Name=2SCD46.04;gbkey=Gene;gene=2SCD46.04;gene_biotype=protein_coding;gene_synonym=2SCD46.04;locus_tag=SCO4190
NC_003888.3	RefSeq	CDS	4598629	4599504	.	+	0	ID=cds4143;Parent=gene4236;Dbxref=Genbank:NP_628365.1,GeneID:1099630;Name=NP_628365.1;Note=2SCD46.04%2C possible GntR-family transcriptional regulator%2C len: 291aa%3B similar to many eg. TR:Q9RIQ2 (EMBL:AJ243257) KorA protein from plasmid pSNA1 of Streptomyces natalensis (245 aa) fasta scores%3B opt: 175%2C z-score: 209.9%2C E(): 0.00033%2C 29.9%25 identity in 194 aa overlap. Also strongly similar to neighbouring CDS 2SCD46.02 fasta scores%3B opt: 1074%2C z-score: 984.2%2C E(): 0%2C 57.6%25 identity in 302 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and helix-turn-helix motif (Score 2173 (+6.59 SD)) at residue 41-62. Note possible alternative downstream translational start codons.;gbkey=CDS;gene=2SCD46.04;product=GntR family transcriptional regulator;protein_id=NP_628365.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4598689	4598841	.	+	.	ID=id5249;Dbxref=GeneID:1099630;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 69.30%2C E-value 7.2e-20;gbkey=misc_feature;gene=2SCD46.04
NC_003888.3	RefSeq	gene	4599453	4600274	.	+	.	ID=gene4237;Dbxref=GeneID:1099631;Name=2SCD46.05;gbkey=Gene;gene=2SCD46.05;gene_biotype=protein_coding;gene_synonym=2SCD46.05;locus_tag=SCO4191
NC_003888.3	RefSeq	CDS	4599453	4600274	.	+	0	ID=cds4144;Parent=gene4237;Dbxref=Genbank:NP_628366.1,GeneID:1099631;Name=NP_628366.1;Note=2SCD46.05%2C possible hydrolase%2C len: 273aa%3B weakly similar to many proposed phosphatases eg. TR:CAB84916 (EMBL:AL162756)  phosphatase from Neisseria meningitidis (235 aa) fasta scores%3B opt: 195%2C z-score: 238.2%2C E(): 8.8e-06%2C 29.5%25 identity in 237 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase. Note possible alternative downstream translational start codons.;gbkey=CDS;gene=2SCD46.05;product=hydrolase;protein_id=NP_628366.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4599594	4600166	.	+	.	ID=id5250;Dbxref=GeneID:1099631;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 37.40%2C E-value 3.2e-07;gbkey=misc_feature;gene=2SCD46.05
NC_003888.3	RefSeq	gene	4600336	4601412	.	+	.	ID=gene4238;Dbxref=GeneID:1099632;Name=2SCD46.06;gbkey=Gene;gene=2SCD46.06;gene_biotype=protein_coding;gene_synonym=2SCD46.06;locus_tag=SCO4192
NC_003888.3	RefSeq	CDS	4600336	4601412	.	+	0	ID=cds4145;Parent=gene4238;Dbxref=Genbank:NP_628367.1,GeneID:1099632;Name=NP_628367.1;Note=2SCD46.06%2C unknown%2C len: 358aa;gbkey=CDS;gene=2SCD46.06;product=hypothetical protein;protein_id=NP_628367.1;transl_table=11
NC_003888.3	RefSeq	gene	4601497	4602498	.	+	.	ID=gene4239;Dbxref=GeneID:1099633;Name=2SCD46.07;gbkey=Gene;gene=2SCD46.07;gene_biotype=protein_coding;gene_synonym=2SCD46.07;locus_tag=SCO4193
NC_003888.3	RefSeq	CDS	4601497	4602498	.	+	0	ID=cds4146;Parent=gene4239;Dbxref=Genbank:NP_628368.1,GeneID:1099633;Name=NP_628368.1;Note=2SCD46.07%2C possible ATP/GTP-binding membrane protein%2C len: 333aa%3B N-terminal region weakly similar to SW:P07682 (LEPA_ECOLI) GTP-binding protein LepA from Escherichia coli (599 aa) fasta scores%3B opt: 142%2C z-score: 162.3%2C E(): 0.15%2C 22.9%25 identity in 341 aa overlap. Contains possible membrane-spanning hydrophobic regions Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=2SCD46.07;product=ATP/GTP-binding membrane protein;protein_id=NP_628368.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4601629	4601652	.	+	.	ID=id5251;Dbxref=GeneID:1099633;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCD46.07
NC_003888.3	RefSeq	ribosome_entry_site	4602481	4602485	.	+	.	ID=id5252;Dbxref=GeneID:1099633;gbkey=RBS;gene=2SCD46.07
NC_003888.3	RefSeq	gene	4602491	4603132	.	+	.	ID=gene4240;Dbxref=GeneID:1099634;Name=2SCD46.08;gbkey=Gene;gene=2SCD46.08;gene_biotype=protein_coding;gene_synonym=2SCD46.08;locus_tag=SCO4194
NC_003888.3	RefSeq	CDS	4602491	4603132	.	+	0	ID=cds4147;Parent=gene4240;Dbxref=Genbank:NP_628369.1,GeneID:1099634;Name=NP_628369.1;Note=2SCD46.08%2C possible TetR-family transcriptional regulator%2C len: 213 aa%3B similar to many others from streptomycetes e.g. TR:CAB88457 (EMBL:AL353815) TetR-family transcriptional regulator from Streptomyces coelicolor (215 aa) fasta scores%3B opt: 369%2C z-score: 450.8%2C E(): 1.3e-17%2C 37.3%25 identity in 212 aa overlap and SW:P39885 (TCMR_STRGA) tetracenomycin c transcriptional repressor from Streptomyces glaucescens (226 aa) fasta scores%3B opt: 246%2C z-score: 303.8%2C E(): 2e-09%2C 36.7%25 identity in 166 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and helix-turn-helix motif (Score 1437 (+4.08 SD)) at residues 40..61;gbkey=CDS;gene=2SCD46.08;product=TetR family transcriptional regulator;protein_id=NP_628369.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4602560	4602694	.	+	.	ID=id5253;Dbxref=GeneID:1099634;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 60.90%2C E-value 2.8e-14;gbkey=misc_feature;gene=2SCD46.08
NC_003888.3	RefSeq	ribosome_entry_site	4603159	4603163	.	+	.	ID=id5254;gbkey=RBS
NC_003888.3	RefSeq	gene	4603165	4605207	.	+	.	ID=gene4241;Dbxref=GeneID:1099635;Name=2SCD46.09;gbkey=Gene;gene=2SCD46.09;gene_biotype=protein_coding;gene_synonym=2SCD46.09;locus_tag=SCO4195
NC_003888.3	RefSeq	CDS	4603165	4605207	.	+	0	ID=cds4148;Parent=gene4241;Dbxref=Genbank:NP_628370.1,GeneID:1099635;Name=NP_628370.1;Note=2SCD46.09%2C possible ATP/GTP binding protein%2C len: 684aa%3B similar to TR:CAB93076 (EMBL:AL357432) ATP/GTP binding protein from Streptomyces coelicolor (681 aa) fasta scores%3B opt: 1940%2C z-score: 2059.2%2C E(): 0%2C 49.6%25 identity in 682 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=2SCD46.09;product=ATP/GTP binding protein;protein_id=NP_628370.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4603777	4603800	.	+	.	ID=id5255;Dbxref=GeneID:1099635;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCD46.09
NC_003888.3	RefSeq	gene	4605265	4606479	.	-	.	ID=gene4242;Dbxref=GeneID:1099636;Name=2SCD46.10c;gbkey=Gene;gene=2SCD46.10c;gene_biotype=protein_coding;gene_synonym=2SCD46.10c;locus_tag=SCO4196
NC_003888.3	RefSeq	CDS	4605265	4606479	.	-	0	ID=cds4149;Parent=gene4242;Dbxref=Genbank:NP_628371.1,GeneID:1099636;Name=NP_628371.1;Note=2SCD46.10c%2C possible organophosphate acid anhydrase%2C len: 404aa%3B similar to TR:Q50432 (EMBL:M91040) organophosphate acid anhydrase from Mycobacterium sp. (409 aa) fasta scores%3B opt: 762%2C z-score: 836.3%2C E(): 0%2C 44.8%25 identity in 402 aa overlap and TR:Q9S1C6 (EMBL:AB007293) organophosphorus insecticide hydrolase from Arthrobacter sp. (415 aa) fasta scores%3B opt: 705%2C z-score: 774.0%2C E(): 0%2C 42.6%25 identity in 408 aa overlap.;gbkey=CDS;gene=2SCD46.10c;product=organophosphate acid anhydrase;protein_id=NP_628371.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4606489	4606492	.	-	.	ID=id5256;gbkey=RBS
NC_003888.3	RefSeq	gene	4606581	4607048	.	+	.	ID=gene4243;Dbxref=GeneID:1099637;Name=2SCD46.11;gbkey=Gene;gene=2SCD46.11;gene_biotype=protein_coding;gene_synonym=2SCD46.11;locus_tag=SCO4197
NC_003888.3	RefSeq	CDS	4606581	4607048	.	+	0	ID=cds4150;Parent=gene4243;Dbxref=Genbank:NP_628372.1,GeneID:1099637;Name=NP_628372.1;Note=2SCD46.11%2C possible MarR-family regulator%2C len: 155 aa%3B similar to many e.g. TR:Q9RK19 (EMBL:AL109974) MarR-family transcriptional regulator from Streptomyces coelicolor (168 aa) fasta scores%3B opt: 192%2C z-score: 240.7%2C E(): 6.4e-06%2C 34.2%25 identity in 149 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family.;gbkey=CDS;gene=2SCD46.11;product=MarR family regulatory protein;protein_id=NP_628372.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4606683	4606997	.	+	.	ID=id5257;Dbxref=GeneID:1099637;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 32.30%2C E-value 1.1e-05;gbkey=misc_feature;gene=2SCD46.11
NC_003888.3	RefSeq	gene	4607362	4607787	.	+	.	ID=gene4244;Dbxref=GeneID:1099638;Name=2SCD46.12;gbkey=Gene;gene=2SCD46.12;gene_biotype=protein_coding;gene_synonym=2SCD46.12;locus_tag=SCO4198
NC_003888.3	RefSeq	CDS	4607362	4607787	.	+	0	ID=cds4151;Parent=gene4244;Dbxref=Genbank:NP_628373.1,GeneID:1099638;Name=NP_628373.1;Note=2SCD46.12%2C probable DNA-binding protein%2C len: 141 aa%3B N-terminal region similar to many eg. TR:O53759 (EMBL:AL021933)  regulatory protein from Mycobacterium tuberculosis (140 aa) fasta scores%3B opt: 412%2C z-score: 503.0%2C E(): 1.6e-20%2C 56.6%25 identity in 113 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and two helix-turn-helix motifs%3B (Score 979 (+2.52 SD)) at residue 51-72 and (Score 1963 (+5.87 SD)) at residue 22-43.;gbkey=CDS;gene=2SCD46.12;product=DNA-binding protein;protein_id=NP_628373.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4607398	4607562	.	+	.	ID=id5258;Dbxref=GeneID:1099638;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 66.40%2C E-value 6.2e-16;gbkey=misc_feature;gene=2SCD46.12
NC_003888.3	RefSeq	gene	4607810	4608451	.	+	.	ID=gene4245;Dbxref=GeneID:1099639;Name=2SCD46.13;gbkey=Gene;gene=2SCD46.13;gene_biotype=protein_coding;gene_synonym=2SCD46.13;locus_tag=SCO4199
NC_003888.3	RefSeq	CDS	4607810	4608451	.	+	0	ID=cds4152;Parent=gene4245;Dbxref=Genbank:NP_628374.1,GeneID:1099639;Name=NP_628374.1;Note=2SCD46.13%2C unknown%2C len: 213aa%3B contains mostly hydrophilic residues.;gbkey=CDS;gene=2SCD46.13;product=hypothetical protein;protein_id=NP_628374.1;transl_table=11
NC_003888.3	RefSeq	gene	4608559	4608900	.	+	.	ID=gene4246;Dbxref=GeneID:1099640;Name=2SCD46.14;gbkey=Gene;gene=2SCD46.14;gene_biotype=protein_coding;gene_synonym=2SCD46.14;locus_tag=SCO4200
NC_003888.3	RefSeq	CDS	4608559	4608900	.	+	0	ID=cds4153;Parent=gene4246;Dbxref=Genbank:NP_628375.1,GeneID:1099640;Name=NP_628375.1;Note=2SCD46.14%2C possible membrane protein%2C len: 113aa%3B similar to SW:Q11143 (Y476_MYCTU) hypothetical protein from Mycobacterium tuberculosis (87 aa) fasta scores%3B opt: 212%2C z-score: 268.0%2C E(): 1.9e-07%2C 41.4%25 identity in 87 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SCD46.14;product=hypothetical protein;protein_id=NP_628375.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4608962	4609060	.	+	.	ID=id5259;Note=3x conserved repeat unit: CGGGCGGCTCAGGCCGTCCGGTCCAGCAGGA;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4609038	4610672	.	-	.	ID=gene4247;Dbxref=GeneID:1099641;Name=2SCD46.15c;gbkey=Gene;gene=2SCD46.15c;gene_biotype=protein_coding;gene_synonym=2SCD46.15c;locus_tag=SCO4201
NC_003888.3	RefSeq	CDS	4609038	4610672	.	-	0	ID=cds4154;Parent=gene4247;Dbxref=Genbank:NP_628376.1,GeneID:1099641;Name=NP_628376.1;Note=2SCD46.15c%2C unknown%2C len: 544 aa%3B regions similar to many from Streptomyces coelicolor of undefined function e.g. TR:Q9RD37 (EMBL:AL133422) hypothetical protein (445 aa) fasta scores%3B opt: 887%2C z-score: 857.7%2C E(): 0%2C 41.4%25 identity in 423 aa overlap and TR:Q9X8X3 (EMBL:AL078610) regulatory protein (422 aa) fasta scores%3B opt: 325%2C z-score: 319.4%2C E(): 2.6e-10%2C 32.4%25 identity in 290 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain;gbkey=CDS;gene=2SCD46.15c;product=hypothetical protein;protein_id=NP_628376.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4609845	4610246	.	-	.	ID=id5260;Dbxref=GeneID:1099641;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 20.20%2C E-value 8.9e-05;gbkey=misc_feature;gene=2SCD46.15c
NC_003888.3	RefSeq	gene	4610815	4611975	.	-	.	ID=gene4248;Dbxref=GeneID:1099642;Name=2SCD46.16c;gbkey=Gene;gene=2SCD46.16c;gene_biotype=protein_coding;gene_synonym=2SCD46.16c;locus_tag=SCO4202
NC_003888.3	RefSeq	CDS	4610815	4611975	.	-	0	ID=cds4155;Parent=gene4248;Dbxref=Genbank:NP_628377.1,GeneID:1099642;Name=NP_628377.1;Note=2SCD46.16c%2C possible hypothetical protein%2C len: 386aa%3B similar to many from Streptomyces coelicolor eg. TR:Q9XAE3 (EMBL:AL079356) hypothetical protein (391 aa) fasta scores%3B opt: 781%2C z-score: 663.2%2C E(): 1.9e-29%2C 38.9%25 identity in 378 aa overlap. Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C a possible cleavable N-terminal signal sequence and coiled-coil regions at 75-118 and 196-233 residues.;gbkey=CDS;gene=2SCD46.16c;product=hypothetical protein;protein_id=NP_628377.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4610854	4611168	.	-	.	ID=id5261;Dbxref=GeneID:1099642;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 96.00%2C E-value 7.4e-25;gbkey=misc_feature;gene=2SCD46.16c
NC_003888.3	RefSeq	gene	4612173	4612988	.	-	.	ID=gene4249;Dbxref=GeneID:1099643;Name=2SCD46.17c;gbkey=Gene;gene=2SCD46.17c;gene_biotype=protein_coding;gene_synonym=2SCD46.17c;locus_tag=SCO4203
NC_003888.3	RefSeq	CDS	4612173	4612988	.	-	0	ID=cds4156;Parent=gene4249;Dbxref=Genbank:NP_628378.1,GeneID:1099643;Name=NP_628378.1;Note=2SCD46.17c%2C unknown%2C len: 271aa;gbkey=CDS;gene=2SCD46.17c;product=hypothetical protein;protein_id=NP_628378.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4613129	4613133	.	+	.	ID=id5262;gbkey=RBS
NC_003888.3	RefSeq	gene	4613136	4614626	.	+	.	ID=gene4250;Dbxref=GeneID:1099644;Name=2SCD46.18;gbkey=Gene;gene=2SCD46.18;gene_biotype=protein_coding;gene_synonym=2SCD46.18;locus_tag=SCO4204
NC_003888.3	RefSeq	CDS	4613136	4614626	.	+	0	ID=cds4157;Parent=gene4250;Dbxref=Genbank:NP_628379.1,GeneID:1099644;Name=NP_628379.1;Note=2SCD46.18%2C possible glycosyltransferase%2C len: 496aa%3B strongly similar to SW:Q11152 (Y486_MYCTU) hypothetical protein from Mycobacterium tuberculosis (480 aa) fasta scores%3B opt: 932%2C z-score: 1025.3%2C E(): 0%2C 58.2%25 identity in 431 aa overlap. Also similar to proposed tranferases eg. TR:Q9Z5B7 (EMBL:AL035478) transferase from Streptomyces coelicolor (406 aa) fasta scores%3B opt: 438%2C z-score: 484.5%2C E(): 1.7e-19%2C 36.2%25 identity in 436 aa overlap. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1.;gbkey=CDS;gene=2SCD46.18;product=glycosyltransferase;protein_id=NP_628379.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4613985	4614524	.	+	.	ID=id5263;Dbxref=GeneID:1099644;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 133.50%2C E-value 3.8e-36;gbkey=misc_feature;gene=2SCD46.18
NC_003888.3	RefSeq	gene	4614619	4615125	.	+	.	ID=gene4251;Dbxref=GeneID:1099645;Name=2SCD46.19;gbkey=Gene;gene=2SCD46.19;gene_biotype=protein_coding;gene_synonym=2SCD46.19;locus_tag=SCO4205
NC_003888.3	RefSeq	CDS	4614619	4615125	.	+	0	ID=cds4158;Parent=gene4251;Dbxref=Genbank:NP_628380.1,GeneID:1099645;Name=NP_628380.1;Note=2SCD46.19%2C conserved hypothetical protein%2C len: 168aa%3B strongly similar to others from mycobacteria eg. SW:Q11153 (Y487_MYCTU) hypothetical protein from Mycobacterium tuberculosis (183 aa) fasta scores%3B opt: 508%2C z-score: 635.1%2C E(): 6.9e-28%2C 48.4%25 identity in 157 aa overlap;gbkey=CDS;gene=2SCD46.19;product=hypothetical protein;protein_id=NP_628380.1;transl_table=11
NC_003888.3	RefSeq	gene	4615154	4615969	.	-	.	ID=gene4252;Dbxref=GeneID:1099646;Name=2SCD46.20c;gbkey=Gene;gene=2SCD46.20c;gene_biotype=protein_coding;gene_synonym=2SCD46.20c;locus_tag=SCO4206
NC_003888.3	RefSeq	CDS	4615154	4615969	.	-	0	ID=cds4159;Parent=gene4252;Dbxref=Genbank:NP_628381.1,GeneID:1099646;Name=NP_628381.1;Note=2SCD46.20c%2C possible AraC-family transcriptional regulator%2C len: 271 aa%3B similar to many e.g. TR:CAB88172 (EMBL:AL352972) AraC-family transcriptional regulator from Streptomyces coelicolor (278 aa) fasta scores%3B opt: 434%2C z-score: 495.7%2C E(): 4e-20%2C 36.4%25 identity in 275 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family.;gbkey=CDS;gene=2SCD46.20c;product=AraC family transcription regulator;protein_id=NP_628381.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4615166	4615423	.	-	.	ID=id5264;Dbxref=GeneID:1099646;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 54.50%2C E-value 2.4e-12;gbkey=misc_feature;gene=2SCD46.20c
NC_003888.3	RefSeq	gene	4616019	4616486	.	+	.	ID=gene4253;Dbxref=GeneID:1099647;Name=2SCD46.21;gbkey=Gene;gene=2SCD46.21;gene_biotype=protein_coding;gene_synonym=2SCD46.21;locus_tag=SCO4207
NC_003888.3	RefSeq	CDS	4616019	4616486	.	+	0	ID=cds4160;Parent=gene4253;Dbxref=Genbank:NP_628382.1,GeneID:1099647;Name=NP_628382.1;Note=2SCD46.21%2C conserved hypothetical protein%2C len: 155aa%3B similar to TR:Q98CG5 (EMBL:AP003005) MLR5159 protein from Rhizobium loti (Mesorhizobium loti) fasta scores%3B opt: 419%2C Z-score: 514.2%2C E(): 5.2e-21%2C 47.368%25 identity (47.368%25 ungapped) in 133 aa overlap. Note possible alternative downstream translational start site.;gbkey=CDS;gene=2SCD46.21;product=hypothetical protein;protein_id=NP_628382.1;transl_table=11
NC_003888.3	RefSeq	gene	4616569	4617858	.	-	.	ID=gene4254;Dbxref=GeneID:1099648;Name=2SCD46.22c;gbkey=Gene;gene=2SCD46.22c;gene_biotype=protein_coding;gene_synonym=2SCD46.22c;locus_tag=SCO4208
NC_003888.3	RefSeq	CDS	4616569	4617858	.	-	0	ID=cds4161;Parent=gene4254;Dbxref=Genbank:NP_628383.1,GeneID:1099648;Name=NP_628383.1;Note=2SCD46.22c%2C possible integral membrane transport protein%2C len: 429aa%3B weakly similar to many membrane proteins eg. TR:O53854 (EMBL:AL022004) membrane protein from Mycobacterium tuberculosis (430 aa) fasta scores%3B opt: 382%2C z-score: 428.1%2C E(): 2.3e-16%2C 26.1%25 identity in 399 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SCD46.22c;product=integral membrane transport protein;protein_id=NP_628383.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4616617	4617825	.	-	.	ID=id5265;Dbxref=GeneID:1099648;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -101.90%2C E-value 0.0031;gbkey=misc_feature;gene=2SCD46.22c
NC_003888.3	RefSeq	sequence_feature	4617959	4618874	.	+	.	ID=id5266;Note=Region previously sequenced as EMBL:M83661 Streptomyces coelicolor phosphoglycerate mutase (PGM) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4618020	4618781	.	+	.	ID=gene4255;Dbxref=GeneID:1099649;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;gene_synonym=2SCD46.23,pgm;locus_tag=SCO4209
NC_003888.3	RefSeq	CDS	4618020	4618781	.	+	0	ID=cds4162;Parent=gene4255;Dbxref=Genbank:NP_628384.1,GeneID:1099649;Name=NP_628384.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=NP_628384.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4618044	4618688	.	+	.	ID=id5267;Dbxref=GeneID:1099649;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 452.60%2C E-value 3.4e-132;gbkey=misc_feature;gene=gpmA
NC_003888.3	RefSeq	sequence_feature	4618047	4618076	.	+	.	ID=id5268;Dbxref=GeneID:1099649;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature;gbkey=misc_feature;gene=gpmA
NC_003888.3	RefSeq	sequence_feature	4618232	4626575	.	+	.	ID=id5269;Note=AT-rich region. Possible recently acquired DNA.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4618881	4619375	.	-	.	ID=gene4256;Dbxref=GeneID:1099650;Name=2SCD46.24c;gbkey=Gene;gene=2SCD46.24c;gene_biotype=protein_coding;gene_synonym=2SCD46.24c;locus_tag=SCO4210
NC_003888.3	RefSeq	CDS	4618881	4619375	.	-	0	ID=cds4163;Parent=gene4256;Dbxref=Genbank:NP_628385.1,GeneID:1099650;Name=NP_628385.1;Note=2SCD46.24c%2C unknown%2C len: 164 aa;gbkey=CDS;gene=2SCD46.24c;product=hypothetical protein;protein_id=NP_628385.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4619382	4619386	.	-	.	ID=id5270;gbkey=RBS
NC_003888.3	RefSeq	gene	4619432	4620040	.	-	.	ID=gene4257;Dbxref=GeneID:1099651;Name=2SCD46.25c;gbkey=Gene;gene=2SCD46.25c;gene_biotype=protein_coding;gene_synonym=2SCD46.25c;locus_tag=SCO4211
NC_003888.3	RefSeq	CDS	4619432	4620040	.	-	0	ID=cds4164;Parent=gene4257;Dbxref=Genbank:NP_628386.1,GeneID:1099651;Name=NP_628386.1;Note=2SCD46.25c%2C possible integrase%2C partial CDS%2C len: 202aa%3B similar to the C-terminal region of many integrases many eg. SW:P09999 (INT2_ECOLI) integrase/recombinase (E2 protein) from plasmid IncN R46 of Escherichia coli (337 aa) fasta scores%3B opt: 160%2C z-score: 193.9%2C E(): 0.0025%2C 28.7%25 identity in 195 aa overlap and TR:O86766 (EMBL:AL031035) TraSA:integrase fusion protein from Streptomyces coelicolor (768 aa) fasta scores%3B .opt: 824%2C z-score: 963.6%2C E(): 0%2C 65.3%25 identity in 190 aa overlap.;gbkey=CDS;gene=2SCD46.25c;product=integrase%2C partial CDS;protein_id=NP_628386.1;transl_table=11
NC_003888.3	RefSeq	gene	4620305	4620667	.	+	.	ID=gene4258;Dbxref=GeneID:1099652;Name=2SCD46.26;gbkey=Gene;gene=2SCD46.26;gene_biotype=protein_coding;gene_synonym=2SCD46.26;locus_tag=SCO4212
NC_003888.3	RefSeq	CDS	4620305	4620667	.	+	0	ID=cds4165;Parent=gene4258;Dbxref=Genbank:NP_628387.1,GeneID:1099652;Name=NP_628387.1;Note=2SCD46.26%2C unknown%2C len: 120 aa%3B similar to TR:Q9ACR7 (EMBL:AL590464) hypothetical protein from Streptomyces coelicolor (122 aa) fasta scores%3B opt: 369%2C Z-score: 454.9%2C E(): 1e-17%2C 52.000%25 identity (56.522%25 ungapped) in 125 aa overlap.;gbkey=CDS;gene=2SCD46.26;product=hypothetical protein;protein_id=NP_628387.1;transl_table=11
NC_003888.3	RefSeq	gene	4621091	4622725	.	+	.	ID=gene4259;Dbxref=GeneID:1099653;Name=2SCD46.27;gbkey=Gene;gene=2SCD46.27;gene_biotype=protein_coding;gene_synonym=2SCD46.27;locus_tag=SCO4213
NC_003888.3	RefSeq	CDS	4621091	4622725	.	+	0	ID=cds4166;Parent=gene4259;Dbxref=Genbank:NP_628388.1,GeneID:1099653;Name=NP_628388.1;Note=2SCD46.27%2C unknown%2C len: 544 aa%3B C-terminal region similar to that of SW:P24202 (MRR_ECOLI) Mrr restriction system protein from Escherichia coli (304 aa) fasta scores%3B opt: 199%2C z-score: 216.8%2C E(): 0.00013%2C 28.4%25 identity in 162 aa overlap. N-terminal region contains possible coiled-coil sequences residues (33-63 and 156-200) and two TTA encoded leucine residues which may be a target for bldA regulation.;gbkey=CDS;gene=2SCD46.27;product=hypothetical protein;protein_id=NP_628388.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4621178	4621180	.	+	.	ID=id5271;Dbxref=GeneID:1099653;Note=TTA encoded leucine residue%2C possible target for bldA regulation;gbkey=misc_feature;gene=2SCD46.27
NC_003888.3	RefSeq	sequence_feature	4621427	4621429	.	+	.	ID=id5272;Dbxref=GeneID:1099653;Note=TTA encoded leucine residue%2C possible target for bldA regulation;gbkey=misc_feature;gene=2SCD46.27
NC_003888.3	RefSeq	gene	4622993	4623433	.	-	.	ID=gene4260;Dbxref=GeneID:1099654;Name=2SCD46.28c;gbkey=Gene;gene=2SCD46.28c;gene_biotype=protein_coding;gene_synonym=2SCD46.28c;locus_tag=SCO4214
NC_003888.3	RefSeq	CDS	4622993	4623433	.	-	0	ID=cds4167;Parent=gene4260;Dbxref=Genbank:NP_628389.1,GeneID:1099654;Name=NP_628389.1;Note=2SCD46.28c%2C possible AbaA-like regulatory protein%2C len: 146aa%3B similar to many from Streptomyces coelicolor eg. TR:Q53897 (EMBL:X60316) AbaA pleiotropic regulatory protein (192 aa) fasta scores%3B opt: 150%2C z-score: 206.3%2C E(): 0.0005%2C 30.7%25 identity in 140 aa overlap and TR:CAB76014 (EMBL:AL157916) AbaA-like regulatory protein (220 aa) fasta scores%3B opt: 159%2C z-score: 217.2%2C E(): 0.00012%2C 37.4%25 identity in 131 aa overlap.;gbkey=CDS;gene=2SCD46.28c;product=AbaA-like regulatory protein;protein_id=NP_628389.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4623752	4623757	.	+	.	ID=id5273;gbkey=RBS
NC_003888.3	RefSeq	gene	4623766	4624524	.	+	.	ID=gene4261;Dbxref=GeneID:1099655;Name=2SCD46.29;gbkey=Gene;gene=2SCD46.29;gene_biotype=protein_coding;gene_synonym=2SCD46.29;locus_tag=SCO4215
NC_003888.3	RefSeq	CDS	4623766	4624524	.	+	0	ID=cds4168;Parent=gene4261;Dbxref=Genbank:NP_628390.1,GeneID:1099655;Name=NP_628390.1;Note=2SCD46.29%2C possible GntR-family regulatory protein%2C len: 252 aa%3B similar to many regulators of possible integrative plasmid origin e.g. TR:Q07191 (EMBL:Z19589) from plasmid pSAM2 of Streptomyces ambofaciens (259 aa) fasta scores%3B opt: 475%2C z-score: 554.1%2C E(): 2.1e-23%2C 34.6%25 identity in 246 aa overlap and TR:Q9X8D2 (EMBL:AL049573) KorSA%2C regulatory protein from Streptomyces coelicolor (259 aa) fasta scores%3B opt: 485%2C z-score: 565.6%2C E(): 4.9e-24%2C 35.0%25 identity in 257 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family.;gbkey=CDS;gene=2SCD46.29;product=GntR family transcriptional regulator;protein_id=NP_628390.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4623808	4623987	.	+	.	ID=id5274;Dbxref=GeneID:1099655;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 84.90%2C E-value 1.1e-24;gbkey=misc_feature;gene=2SCD46.29
NC_003888.3	RefSeq	gene	4624587	4624796	.	-	.	ID=gene4262;Dbxref=GeneID:1099656;Name=2SCD46.30c;gbkey=Gene;gene=2SCD46.30c;gene_biotype=protein_coding;gene_synonym=2SCD46.30c;locus_tag=SCO4216
NC_003888.3	RefSeq	CDS	4624587	4624796	.	-	0	ID=cds4169;Parent=gene4262;Dbxref=Genbank:NP_628391.1,GeneID:1099656;Name=NP_628391.1;Note=2SCD46.30c%2C unknown%2C len: 69 aa;gbkey=CDS;gene=2SCD46.30c;product=hypothetical protein;protein_id=NP_628391.1;transl_table=11
NC_003888.3	RefSeq	gene	4624932	4625816	.	-	.	ID=gene4263;Dbxref=GeneID:1099657;Name=2SCD46.31c;gbkey=Gene;gene=2SCD46.31c;gene_biotype=protein_coding;gene_synonym=2SCD46.31c;locus_tag=SCO4217
NC_003888.3	RefSeq	CDS	4624932	4625816	.	-	0	ID=cds4170;Parent=gene4263;Dbxref=Genbank:NP_628392.1,GeneID:1099657;Name=NP_628392.1;Note=2SCD46.31c%2C conserved hypothetical protein%2C len: 294 aa%3B similar to TR:P75863 (EMBL:AE000196) hypothetical protein from Escherichia coli (369 aa) fasta scores%3B opt: 244%2C z-score: 297.9%2C E(): 4e-09%2C 33.3%25 identity in 288 aa overlap.;gbkey=CDS;gene=2SCD46.31c;product=hypothetical protein;protein_id=NP_628392.1;transl_table=11
NC_003888.3	RefSeq	gene	4625975	4626166	.	+	.	ID=gene4264;Dbxref=GeneID:1099658;Name=2SCD46.32;gbkey=Gene;gene=2SCD46.32;gene_biotype=protein_coding;gene_synonym=2SCD46.32;locus_tag=SCO4218
NC_003888.3	RefSeq	CDS	4625975	4626166	.	+	0	ID=cds4171;Parent=gene4264;Dbxref=Genbank:NP_628393.1,GeneID:1099658;Name=NP_628393.1;Note=2SCD46.32%2C possible small hydrophilic protein%2C len: 63 aa;gbkey=CDS;gene=2SCD46.32;product=small hydrophilic protein;protein_id=NP_628393.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4626384	4626388	.	+	.	ID=id5275;gbkey=RBS
NC_003888.3	RefSeq	gene	4626394	4627158	.	+	.	ID=gene4265;Dbxref=GeneID:1099659;Name=2SCD46.33;gbkey=Gene;gene=2SCD46.33;gene_biotype=protein_coding;gene_synonym=2SCD46.33;locus_tag=SCO4219
NC_003888.3	RefSeq	CDS	4626394	4627158	.	+	0	ID=cds4172;Parent=gene4265;Dbxref=Genbank:NP_628394.1,GeneID:1099659;Name=NP_628394.1;Note=2SCD46.33%2C possible hydrolase (dienelactone hydrolase family)%2C len: 254aa%3B similar to many eg. SW:P27136 (TFE1_ALCEU) carboxymethylenebutenolidase I (EC 3.1.1.45) from Alcaligenes eutrophus (Ralstonia eutropha) (234 aa) fasta scores%3B opt: 215%2C z-score: 250.7%2C E(): 1.7e-06%2C 28.3%25 identity in 230 aa overlap and TR:CAB92202 (EMBL:AL356592) hydrolase from Streptomyces coelicolor (251 aa) fasta scores%3B opt: 754%2C z-score: 853.2%2C E(): 0%2C 48.4%25 identity in 248 aa overlap. Contains Pfam match to entry PF01738 DLH%2C Dienelactone hydrolase family.;gbkey=CDS;gene=2SCD46.33;product=dienelactone hydrolase family hydrolase;protein_id=NP_628394.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4626442	4627122	.	+	.	ID=id5276;Dbxref=GeneID:1099659;Note=Pfam match to entry PF01738 DLH%2C Dienelactone hydrolase family%2C score 113.00%2C E-value 1.6e-30;gbkey=misc_feature;gene=2SCD46.33
NC_003888.3	RefSeq	gene	4627348	4627767	.	-	.	ID=gene4266;Dbxref=GeneID:1099660;Name=2SCD46.34c;gbkey=Gene;gene=2SCD46.34c;gene_biotype=protein_coding;gene_synonym=2SCD46.34c;locus_tag=SCO4220
NC_003888.3	RefSeq	CDS	4627348	4627767	.	-	0	ID=cds4173;Parent=gene4266;Dbxref=Genbank:NP_628395.1,GeneID:1099660;Name=NP_628395.1;Note=2SCD46.34c%2C conserved hypothetical protein%2C len: 139aa%3B similar to others from actinomycetes eg. TR:CAB89437 (EMBL:AL354048) hypothetical protein from Streptomyces coelicolor (145 aa) fasta scores%3B opt: 105%2C z-score: 143.5%2C E(): 1.6%2C 37.0%25 identity in 146 aa overlap.;gbkey=CDS;gene=2SCD46.34c;product=hypothetical protein;protein_id=NP_628395.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4627772	4627776	.	-	.	ID=id5277;gbkey=RBS
NC_003888.3	RefSeq	gene	4627832	4628248	.	-	.	ID=gene4267;Dbxref=GeneID:1099661;Name=2SCD46.35c;gbkey=Gene;gene=2SCD46.35c;gene_biotype=protein_coding;gene_synonym=2SCD46.35c;locus_tag=SCO4221
NC_003888.3	RefSeq	CDS	4627832	4628248	.	-	0	ID=cds4174;Parent=gene4267;Dbxref=Genbank:NP_628396.1,GeneID:1099661;Name=NP_628396.1;Note=2SCD46.35c%2C unknown%2C len: aa;gbkey=CDS;gene=2SCD46.35c;product=hypothetical protein;protein_id=NP_628396.1;transl_table=11
NC_003888.3	RefSeq	gene	4628357	4628737	.	+	.	ID=gene4268;Dbxref=GeneID:1099662;Name=2SCD46.36;gbkey=Gene;gene=2SCD46.36;gene_biotype=protein_coding;gene_synonym=2SCD46.36;locus_tag=SCO4222
NC_003888.3	RefSeq	CDS	4628357	4628737	.	+	0	ID=cds4175;Parent=gene4268;Dbxref=Genbank:NP_628397.1,GeneID:1099662;Name=NP_628397.1;Note=2SCD46.36%2C conserved hypothetical protein%2C len: 126aa%3B similar to others from actinomycetes eg. TR:O06633 (EMBL:Z95618) hypothetical protein from Mycobacterium tuberculosis (115 aa) fasta scores%3B opt: 256%2C z-score: 332.9%2C E(): 4.5e-11%2C 36.1%25 identity in 119 aa overlap.;gbkey=CDS;gene=2SCD46.36;product=hypothetical protein;protein_id=NP_628397.1;transl_table=11
NC_003888.3	RefSeq	gene	4628765	4629652	.	-	.	ID=gene4269;Dbxref=GeneID:1099663;Name=2SCD46.37c;gbkey=Gene;gene=2SCD46.37c;gene_biotype=protein_coding;gene_synonym=2SCD46.37c;locus_tag=SCO4223
NC_003888.3	RefSeq	CDS	4628765	4629652	.	-	0	ID=cds4176;Parent=gene4269;Dbxref=Genbank:NP_628398.1,GeneID:1099663;Name=NP_628398.1;Note=2SCD46.37c%2C possible AraC-family transcriptional regulator%2C len: 295aa%3B similar to many eg. SW:P22539 (SOXS_ECOLI) regulatory protein SoxS from Escherichia coli (106 aa) fasta scores%3B opt: 186%2C z-score: 223.7%2C E(): 5.4e-05%2C 28.4%25 identity in 95 aa overlap and TR:P96662 (EMBL:AB001488) probable hth_arac_family of transcriptional regulator from Bacillus subtilis (290 aa) fasta scores%3B opt: 726%2C z-score: 825.6%2C E(): 0%2C 37.7%25 identity in 289 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and Prosite match to PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=CDS;gene=2SCD46.37c;product=AraC family transcription regulator;protein_id=NP_628398.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4629320	4629580	.	-	.	ID=id5278;Dbxref=GeneID:1099663;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 44.30%2C E-value 2.6e-09;gbkey=misc_feature;gene=2SCD46.37c
NC_003888.3	RefSeq	sequence_feature	4629341	4629469	.	-	.	ID=id5279;Dbxref=GeneID:1099663;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=2SCD46.37c
NC_003888.3	RefSeq	gene	4629724	4630989	.	-	.	ID=gene4270;Dbxref=GeneID:1099664;Name=2SCD46.38c;gbkey=Gene;gene=2SCD46.38c;gene_biotype=protein_coding;gene_synonym=2SCD46.38c;locus_tag=SCO4224
NC_003888.3	RefSeq	CDS	4629724	4630989	.	-	0	ID=cds4177;Parent=gene4270;Dbxref=Genbank:NP_628399.1,GeneID:1099664;Name=NP_628399.1;Note=2SCD46.38c%2C unknown%2C len: 421aa;gbkey=CDS;gene=2SCD46.38c;product=hypothetical protein;protein_id=NP_628399.1;transl_table=11
NC_003888.3	RefSeq	gene	4631073	4631465	.	-	.	ID=gene4271;Dbxref=GeneID:1099665;Name=2SCD46.39c;gbkey=Gene;gene=2SCD46.39c;gene_biotype=protein_coding;gene_synonym=2SCD46.39c;locus_tag=SCO4225
NC_003888.3	RefSeq	CDS	4631073	4631465	.	-	0	ID=cds4178;Parent=gene4271;Dbxref=Genbank:NP_628400.1,GeneID:1099665;Name=NP_628400.1;Note=2SCD46.39c%2C possible integral membrane protein%2C len: 130aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SCD46.39c;product=hypothetical protein;protein_id=NP_628400.1;transl_table=11
NC_003888.3	RefSeq	gene	4631601	4631849	.	-	.	ID=gene4272;Dbxref=GeneID:1099666;Name=2SCD46.40c;gbkey=Gene;gene=2SCD46.40c;gene_biotype=protein_coding;gene_synonym=2SCD46.40c;locus_tag=SCO4226
NC_003888.3	RefSeq	CDS	4631601	4631849	.	-	0	ID=cds4179;Parent=gene4272;Dbxref=Genbank:NP_628401.1,GeneID:1099666;Name=NP_628401.1;Note=2SCD46.40c%2C unknown%2C len: 82aa;gbkey=CDS;gene=2SCD46.40c;product=hypothetical protein;protein_id=NP_628401.1;transl_table=11
NC_003888.3	RefSeq	gene	4631977	4632216	.	-	.	ID=gene4273;Dbxref=GeneID:1099667;Name=2SCD46.41c;gbkey=Gene;gene=2SCD46.41c;gene_biotype=protein_coding;gene_synonym=2SCD46.41c;locus_tag=SCO4227
NC_003888.3	RefSeq	CDS	4631977	4632216	.	-	0	ID=cds4180;Parent=gene4273;Dbxref=Genbank:NP_628402.1,GeneID:1099667;Name=NP_628402.1;Note=2SCD46.41c%2C unknown%2C len: 421aa;gbkey=CDS;gene=2SCD46.41c;product=hypothetical protein;protein_id=NP_628402.1;transl_table=11
NC_003888.3	RefSeq	gene	4632295	4632984	.	-	.	ID=gene4274;Dbxref=GeneID:1099668;Name=2SCD46.42c;gbkey=Gene;gene=2SCD46.42c;gene_biotype=protein_coding;gene_synonym=2SCD46.42c,SCD8A.01c;locus_tag=SCO4228
NC_003888.3	RefSeq	CDS	4632295	4632984	.	-	0	ID=cds4181;Parent=gene4274;Dbxref=Genbank:NP_733631.1,GeneID:1099668;Name=NP_733631.1;Note=SCD8A.01c%2C probable phosphate transport system regulatory protein (fragment)%2C len: >139 aa%3B similar to C-terminal region of TR:O53833 (EMBL:AL022004) Mycobacterium tuberculosis phosphate transport system regulatory protein%2C PhoY-2%2C 213 aa%3B fasta scores: opt: 383 z-score: 454.2 E(): 7.2e-18%3B 46.8%25 identity in 139 aa overlap and of SW:PHOU_ECOLI (EMBL:X02723) Escherichia coli phosphate transport system regulatory protein%2C PhoU%2C 241 aa%3B fasta scores: opt: 213 z-score: 258.9 E(): 5.5e-07%3B 28.1%25 identity in 128 aa overlap~2SCD46.42c%2C possible regulatory protein%2C partial CDS%2C len: >123aa%3B similar to the C-terminus of many proposed eg. phosphate transport regulators eg. TR:O53833 (EMBL:AL022004) phosphate transport system regulatory protein from Mycobacterium tuberculosis (213 aa) fasta scores%3B opt: 380%2C z-score: 494.5%2C E(): 4.4e-20%2C 52.9%25 identity in 104 aa overlap.;gbkey=CDS;gene=2SCD46.42c;product=phosphate transport system regulator;protein_id=NP_733631.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4632993	4632998	.	-	.	ID=id5280;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4633193	4633196	.	+	.	ID=id5281;gbkey=RBS
NC_003888.3	RefSeq	gene	4633199	4634479	.	+	.	ID=gene4275;Dbxref=GeneID:1099669;Name=SCD8A.02;gbkey=Gene;gene=SCD8A.02;gene_biotype=protein_coding;gene_synonym=SCD8A.02;locus_tag=SCO4229
NC_003888.3	RefSeq	CDS	4633199	4634479	.	+	0	ID=cds4182;Parent=gene4275;Dbxref=Genbank:NP_628403.1,GeneID:1099669;Name=NP_628403.1;Note=SCD8A.02%2C possible sensor kinase%2C len: 426 aa%3B similar to SW:SEX3_MYCTU (EMBL:Y13628) Mycobacterium tuberculosis sensor-like histidine kinase SenX3 (EC 2.7.3.-)%2C 410 aa%3B fasta scores: opt: 874 z-score: 939.7 E(): 0%3B 43.6%25 identity in 406 aa overlap and to C-terminal region of SW:PHOR_ECOLI (EMBL:X04704) Escherichia coli phosphate regulon sensor protein PhoR%2C 431 aa%3B fasta scores: opt: 521 z-score: 562.5 E(): 6.7e-24%3B 36.8%25 identity in 261 aa overlap%3B also similar to various S. coelicolor sensor proteins%2C e.g. SCH22A.18c%2C 370 aa%3B fasta scores: opt: 415 z-score: 388.1 E(): 3.9e-16%3B 31.1%25 identity in 383 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD8A.02;product=sensor kinase;protein_id=NP_628403.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4633691	4634335	.	+	.	ID=id5282;Dbxref=GeneID:1099669;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 217.80%2C E-value 1.6e-61;gbkey=misc_feature;gene=SCD8A.02
NC_003888.3	RefSeq	gene	4634485	4635156	.	+	.	ID=gene4276;Dbxref=GeneID:1099670;Name=SCD8A.03;gbkey=Gene;gene=SCD8A.03;gene_biotype=protein_coding;gene_synonym=SCD8A.03;locus_tag=SCO4230
NC_003888.3	RefSeq	CDS	4634485	4635156	.	+	0	ID=cds4183;Parent=gene4276;Dbxref=Genbank:NP_628404.1,GeneID:1099670;Name=NP_628404.1;Note=SCD8A.03%2C probable response regulator%2C len: 223 aa%3B similar to TR:O86269 (EMBL:AJ001103) Lactococcus lactis ArcA protein%2C 233 aa%3B fasta scores: opt: 700 z-score: 810.0 E(): 0%3B 49.3%25 identity in 223 aa overlap and to TR:Q56180 (EMBL:U38917) Synechococcus sp. response regulator PhoB%2C 234 aa%3B fasta scores: opt: 687 z-score: 795.1 E(): 0%3B 48.0%25 identity in 229 aa overlap%2C and similar to many S. coelicolor response regulators%2C e.g. SCH22A.19c%2C 256 aa%3B fasta scores: opt: 687 z-score: 696.9 E(): 2.5e-33%3B 49.1%25 identity in 224 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=SCD8A.03;product=response regulator;protein_id=NP_628404.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4634485	4634811	.	+	.	ID=id5283;Dbxref=GeneID:1099670;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 130.30%2C E-value 3.4e-35;gbkey=misc_feature;gene=SCD8A.03
NC_003888.3	RefSeq	sequence_feature	4634920	4635138	.	+	.	ID=id5284;Dbxref=GeneID:1099670;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 117.10%2C E-value 9.8e-34;gbkey=misc_feature;gene=SCD8A.03
NC_003888.3	RefSeq	gene	4635317	4636042	.	-	.	ID=gene4277;Dbxref=GeneID:1099671;Name=SCD8A.04c;gbkey=Gene;gene=SCD8A.04c;gene_biotype=protein_coding;gene_synonym=SCD8A.04c;locus_tag=SCO4231
NC_003888.3	RefSeq	CDS	4635317	4636042	.	-	0	ID=cds4184;Parent=gene4277;Dbxref=Genbank:NP_628405.1,GeneID:1099671;Name=NP_628405.1;Note=SCD8A.04c%2C possible lipoprotein%2C len: 241 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD8A.04c;product=lipoprotein;protein_id=NP_628405.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4635968	4636000	.	-	.	ID=id5285;Dbxref=GeneID:1099671;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD8A.04c
NC_003888.3	RefSeq	ribosome_entry_site	4636054	4636057	.	-	.	ID=id5286;gbkey=RBS
NC_003888.3	RefSeq	gene	4636744	4637226	.	+	.	ID=gene4278;Dbxref=GeneID:1099672;Name=SCD8A.05;gbkey=Gene;gene=SCD8A.05;gene_biotype=protein_coding;gene_synonym=SCD8A.05;locus_tag=SCO4232
NC_003888.3	RefSeq	CDS	4636744	4637226	.	+	0	ID=cds4185;Parent=gene4278;Dbxref=Genbank:NP_628406.1,GeneID:1099672;Name=NP_628406.1;Note=SCD8A.05%2C probable transcriptional factor regulator%2C len: 160 aa%3B similar to TR:O53568 (EMBL:AL022075) Mycobacterium tuberculosis transcriptional regulator RV3583c%2C 162 aa%3B fasta scores: opt: 878 z-score: 1046.7 E(): 0%3B 85.0%25 identity in 160 aa overlap;gbkey=CDS;gene=SCD8A.05;product=transcriptional factor regulator;protein_id=NP_628406.1;transl_table=11
NC_003888.3	RefSeq	gene	4637542	4638354	.	+	.	ID=gene4279;Dbxref=GeneID:1099673;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;gene_synonym=SCD8A.06;locus_tag=SCO4233
NC_003888.3	RefSeq	CDS	4637542	4638354	.	+	0	ID=cds4186;Parent=gene4279;Dbxref=Genbank:NP_628407.1,GeneID:1099673;Name=NP_628407.1;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers;gbkey=CDS;gene=ispD;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=NP_628407.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4637641	4638330	.	+	.	ID=id5287;Dbxref=GeneID:1099673;Note=Pfam match to entry PF01128 UPF0007%2C Uncharacterized protein family UPF0007%2C score 261.00%2C E-value 1.5e-74;gbkey=misc_feature;gene=ispD
NC_003888.3	RefSeq	sequence_feature	4637941	4637964	.	+	.	ID=id5288;Dbxref=GeneID:1099673;Note=PS01295 Uncharacterized protein family UPF0007 signature;gbkey=misc_feature;gene=ispD
NC_003888.3	RefSeq	ribosome_entry_site	4638332	4638336	.	+	.	ID=id5289;Dbxref=GeneID:1099673;gbkey=RBS;gene=ispD
NC_003888.3	RefSeq	gene	4638344	4638856	.	+	.	ID=gene4280;Dbxref=GeneID:1099674;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;gene_synonym=SCD8A.07;locus_tag=SCO4234
NC_003888.3	RefSeq	CDS	4638344	4638856	.	+	0	ID=cds4187;Parent=gene4280;Dbxref=Genbank:NP_628408.1,GeneID:1099674;Name=NP_628408.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=NP_628408.1;transl_table=11
NC_003888.3	RefSeq	gene	4638881	4640722	.	+	.	ID=gene4281;Dbxref=GeneID:1099675;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;gene_synonym=SCD8A.08;locus_tag=SCO4235
NC_003888.3	RefSeq	CDS	4638881	4640722	.	+	0	ID=cds4188;Parent=gene4281;Dbxref=Genbank:NP_628409.1,GeneID:1099675;Name=NP_628409.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=NP_628409.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4638986	4639249	.	+	.	ID=id5290;Dbxref=GeneID:1099675;Note=degenerate repeat unit%3D 6x P(T/A)RGDKKRA(R/P)R;gbkey=repeat_region;gene=cysS
NC_003888.3	RefSeq	sequence_feature	4639364	4640671	.	+	.	ID=id5291;Dbxref=GeneID:1099675;Note=Pfam match to entry PF01406 tRNA-synt_1e%2C tRNA synthetases class I (C)%2C score 659.70%2C E-value 1.5e-194;gbkey=misc_feature;gene=cysS
NC_003888.3	RefSeq	ribosome_entry_site	4640840	4640843	.	+	.	ID=id5292;gbkey=RBS
NC_003888.3	RefSeq	gene	4640855	4641799	.	+	.	ID=gene4282;Dbxref=GeneID:1099676;Name=SCD8A.09;gbkey=Gene;gene=SCD8A.09;gene_biotype=protein_coding;gene_synonym=SCD8A.09;locus_tag=SCO4236
NC_003888.3	RefSeq	CDS	4640855	4641799	.	+	0	ID=cds4189;Parent=gene4282;Dbxref=Genbank:NP_628410.1,GeneID:1099676;Name=NP_628410.1;Note=SCD8A.09%2C possible tRNA/rRNA methyltransferase%2C len: 314 aa%3B similar to TR:P96861 (EMBL:Z92774) Mycobacterium tuberculosis hypothetical 34.0 kD protein MTCY06G11.26c%2C 322 aa%3B fasta scores: opt: 937 z-score: 1001.6 E(): 0%3B 56.7%25 identity in 319 aa overlap and to SW:YJFH_ECOLI (EMBL:U14003) Escherichia coli hypothetical tRNA/rRNA methyltransferase YjfH (EC 2.1.1.-)%2C 243 aa%3B fasta scores: opt: 519 z-score: 560.7 E(): 8.5e-24%3B 38.6%25 identity in 249 aa overlap. Contains Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family;gbkey=CDS;gene=SCD8A.09;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=NP_628410.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4641347	4641775	.	+	.	ID=id5293;Dbxref=GeneID:1099676;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 157.90%2C E-value 1.8e-43;gbkey=misc_feature;gene=SCD8A.09
NC_003888.3	RefSeq	gene	4641923	4643638	.	+	.	ID=gene4283;Dbxref=GeneID:1099677;Name=SCD8A.10;gbkey=Gene;gene=SCD8A.10;gene_biotype=protein_coding;gene_synonym=SCD8A.10;locus_tag=SCO4237
NC_003888.3	RefSeq	CDS	4641923	4643638	.	+	0	ID=cds4190;Parent=gene4283;Dbxref=Genbank:NP_628411.1,GeneID:1099677;Name=NP_628411.1;Note=SCD8A.10%2C possible integral membrane protein%2C len: 571 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD8A.10;product=hypothetical protein;protein_id=NP_628411.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	4643657	4643711	.	-	.	ID=id5294;Note=11090 GCGGTACGACAGCGGGGCCCCGCAC 11114-11120 GTGCGGGGCCCCGCTGTCGTACGGC 11144. 24/25 (96%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4643727	4644464	.	-	.	ID=gene4284;Dbxref=GeneID:1099678;Name=SCD8A.11c;gbkey=Gene;gene=SCD8A.11c;gene_biotype=protein_coding;gene_synonym=SCD8A.11c;locus_tag=SCO4238
NC_003888.3	RefSeq	CDS	4643727	4644464	.	-	0	ID=cds4191;Parent=gene4284;Dbxref=Genbank:NP_628412.1,GeneID:1099678;Name=NP_628412.1;Note=SCD8A.11%2C probable guanyltransferase%2C len: 245 aa%3B similar to TR:O93827 (EMBL:AF030299) Candida albicans mannose-1-phosphate guanyltransferase (EC 2.7.7.13) Psa1%2C 362 aa%3B fasta scores: opt: 396 z-score: 478.0 E(): 3.4e-19%3B 32.4%25 identity in 244 aa overlap and to SW:MPG1_YEAST (EMBL:U19608) Saccharomyces cerevisiae mannose-1-phosphate guanyltransferase (EC 2.7.7.13) Psa1%2C 361 aa%3B fasta scores: opt: 391 z-score: 472.0 E(): 7.3e-19%3B 31.6%25 identity in 244 aa overlap. Contains Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase;gbkey=CDS;gene=SCD8A.11c;product=guanyltransferase;protein_id=NP_628412.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4643739	4644428	.	-	.	ID=id5295;Dbxref=GeneID:1099678;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C score 66.20%2C E-value 6.8e-16;gbkey=misc_feature;gene=SCD8A.11c
NC_003888.3	RefSeq	gene	4644506	4644952	.	-	.	ID=gene4285;Dbxref=GeneID:1099679;Name=SCD8A.12c;gbkey=Gene;gene=SCD8A.12c;gene_biotype=protein_coding;gene_synonym=SCD8A.12c;locus_tag=SCO4239
NC_003888.3	RefSeq	CDS	4644506	4644952	.	-	0	ID=cds4192;Parent=gene4285;Dbxref=Genbank:NP_628413.1,GeneID:1099679;Name=NP_628413.1;Note=SCD8A.12c%2C possible small membrane protein%2C len: 148 aa%3B similar to TR:P96484 (EMBL:Y08921) Streptomyces reticuli hypothetical 15.9 kD protein%2C MsiK%2C 152 aa%3B fasta scores: opt: 724 z-score: 885.9 E(): 0%3B 74.8%25 identity in 151 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD8A.12c;product=small membrane protein;protein_id=NP_628413.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	4645101	4645140	.	-	.	ID=id5296;Note=12534 ACGAAAAGAGCCCCGCAGC 12552-12555 GCCGCGGGGCTCTTTTCGT 12573. 18/19 ( 94%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4645175	4646311	.	-	.	ID=gene4286;Dbxref=GeneID:1099680;Name=msiK;gbkey=Gene;gene=msiK;gene_biotype=protein_coding;gene_synonym=msiK,SCD8A.13c;locus_tag=SCO4240
NC_003888.3	RefSeq	CDS	4645175	4646311	.	-	0	ID=cds4193;Parent=gene4286;Dbxref=Genbank:NP_628414.1,GeneID:1099680;Name=NP_628414.1;Note=SCD8A.13c%2C msiK%2C ABC transporter ATP-binding protein%2C len: 378 aa%3B highly similar to TR:P96483 (EMBL:Y08921) Streptomyces reticuli gene encoding MsiK protein and ORF1%2C 377 aa%3B fasta scores: opt: 2268 z-score: 2471.1 E(): 0%3B 92.6%25 identity in 378 aa overlap and to SW:UGPC_ECOLI (EMBL:X13141) Escherichia coli sn-glycerol-3-phosphate transport ATP-binding protein UgpC%2C 365 aa%3B fasta scores: opt: 1031 z-score: 1127.4 E(): 0%3B 48.8%25 identity in 379 aa overlap also similar to TR:CAB46805 (EMBL:AL096811) Streptomyces coelicolor SCI30A.28c%2C 445 aa%3B fasta scores: opt: 866 z-score: 719.0 E(): 1.4e-34%3B 49.3%25 identity in 292 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=msiK;product=ABC transporter ATP-binding protein;protein_id=NP_628414.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4645676	4646221	.	-	.	ID=id5297;Dbxref=GeneID:1099680;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 209.70%2C E-value 4.4e-59;gbkey=misc_feature;gene=msiK
NC_003888.3	RefSeq	sequence_feature	4645862	4645906	.	-	.	ID=id5298;Dbxref=GeneID:1099680;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=msiK
NC_003888.3	RefSeq	sequence_feature	4646177	4646200	.	-	.	ID=id5299;Dbxref=GeneID:1099680;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=msiK
NC_003888.3	RefSeq	gene	4646531	4646607	.	+	.	ID=gene4287;Dbxref=GeneID:3240050;Name=SCOt47;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt47
NC_003888.3	RefSeq	tRNA	4646531	4646607	.	+	.	ID=rna64;Parent=gene4287;Dbxref=GeneID:3240050;Note=tRNA Thr anticodon TGT%2C Cove score 77.78;gbkey=tRNA;product=tRNA-Thr
NC_003888.3	RefSeq	exon	4646531	4646607	.	+	.	ID=id5300;Parent=rna64;Dbxref=GeneID:3240050;Note=tRNA Thr anticodon TGT%2C Cove score 77.78;gbkey=tRNA;product=tRNA-Thr
NC_003888.3	RefSeq	stem_loop	4646617	4646657	.	-	.	ID=id5301;Note=14050 CGCCGACGCCCCCGCGATCC 14069-14071 GGATCGCGGGGGCGTCGGCG 14090. 20/20 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4646671	4648308	.	-	.	ID=gene4288;Dbxref=GeneID:1099681;Name=SCD8A.14c;gbkey=Gene;gene=SCD8A.14c;gene_biotype=protein_coding;gene_synonym=SCD8A.14c;locus_tag=SCO4241
NC_003888.3	RefSeq	CDS	4646671	4648308	.	-	0	ID=cds4194;Parent=gene4288;Dbxref=Genbank:NP_628415.1,GeneID:1099681;Name=NP_628415.1;Note=SCD8A.14c%2C possible proteinase precursor%2C len: 545 aa%3B similar to TR:Q54398 (EMBL:L42758) Streptomyces lividans proteinase SlpD%2C 539 aa%3B fasta scores: opt: 1116 z-score: 1193.2 E(): 0%3B 40.1%25 identity in 541 aa overlap and to TR:Q54399 (EMBL:L42759) Streptomyces lividans proteinase SlpE%2C 513 aa%3B fasta scores: opt: 1004 z-score: 1074.0 E(): 0%3B 47.7%25 identity in 539 aa overlap%2C and to TR:Q54398 (EMBL:AL035636) Streptomyces coelicolor SCH5.02c%2C proteinase SlpD%2C 539 aa%3B fasta scores: opt: 1116 z-score: 1004.4 E(): 0%3B 40.1%25 identity in 541 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold and correcty situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD8A.14c;product=proteinase;protein_id=NP_628415.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4646737	4647855	.	-	.	ID=id5302;Dbxref=GeneID:1099681;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 61.40%2C E-value 2e-14;gbkey=misc_feature;gene=SCD8A.14c
NC_003888.3	RefSeq	sequence_feature	4648231	4648263	.	-	.	ID=id5303;Dbxref=GeneID:1099681;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD8A.14c
NC_003888.3	RefSeq	ribosome_entry_site	4648317	4648321	.	-	.	ID=id5304;gbkey=RBS
NC_003888.3	RefSeq	gene	4648427	4649833	.	-	.	ID=gene4289;Dbxref=GeneID:1099682;Name=SCD8A.15c;gbkey=Gene;gene=SCD8A.15c;gene_biotype=protein_coding;gene_synonym=SCD8A.15c;locus_tag=SCO4242
NC_003888.3	RefSeq	CDS	4648427	4649833	.	-	0	ID=cds4195;Parent=gene4289;Dbxref=Genbank:NP_628416.1,GeneID:1099682;Name=NP_628416.1;Note=SCD8A.15c%2C possible membrane protein%2C len: 468 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD8A.15c;product=hypothetical protein;protein_id=NP_628416.1;transl_table=11
NC_003888.3	RefSeq	gene	4649830	4650402	.	-	.	ID=gene4290;Dbxref=GeneID:1099683;Name=SCD8A.16c;gbkey=Gene;gene=SCD8A.16c;gene_biotype=protein_coding;gene_synonym=SCD8A.16c;locus_tag=SCO4243
NC_003888.3	RefSeq	CDS	4649830	4650402	.	-	0	ID=cds4196;Parent=gene4290;Dbxref=Genbank:NP_628417.1,GeneID:1099683;Name=NP_628417.1;Note=SCD8A.16c%2C possible hypothetical protein%2C len: 190 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD8A.16c;product=hypothetical protein;protein_id=NP_628417.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4649836	4649839	.	-	.	ID=id5305;Dbxref=GeneID:1099683;gbkey=RBS;gene=SCD8A.16c
NC_003888.3	RefSeq	gene	4650399	4652357	.	-	.	ID=gene4291;Dbxref=GeneID:1099684;Name=SCD8A.17c;gbkey=Gene;gene=SCD8A.17c;gene_biotype=protein_coding;gene_synonym=SCD8A.17c;locus_tag=SCO4244
NC_003888.3	RefSeq	CDS	4650399	4652357	.	-	0	ID=cds4197;Parent=gene4291;Dbxref=Genbank:NP_628418.1,GeneID:1099684;Name=NP_628418.1;Note=SCD8A.17c%2C unknown%2C len: 652 aa;gbkey=CDS;gene=SCD8A.17c;product=hypothetical protein;protein_id=NP_628418.1;transl_table=11
NC_003888.3	RefSeq	gene	4652357	4652809	.	-	.	ID=gene4292;Dbxref=GeneID:1099685;Name=SCD8A.18c;gbkey=Gene;gene=SCD8A.18c;gene_biotype=protein_coding;gene_synonym=SCD8A.18c;locus_tag=SCO4245
NC_003888.3	RefSeq	CDS	4652357	4652809	.	-	0	ID=cds4198;Parent=gene4292;Dbxref=Genbank:NP_628419.1,GeneID:1099685;Name=NP_628419.1;Note=SCD8A.18c%2C hypothetical protein%2C len: 150 aa%3B similar to TR:Q988W8 (EMBL:AP003009) MLR6561 protein from Rhizobium loti (Mesorhizobium loti) (136 aa) fasta scores%3B opt: 360%2C Z-score: 445.9%2C E(): 3.3e-17%2C 44.882%25 identity (47.107%25 ungapped) in 127 aa overlap. Also similar to TR:Q9ZXK9 (EMBL:AB008550) Pseudomonas aeruginosa phage phi CTX ORF17%2C 114 aa%3B fasta scores: opt: 172 z-score: 230.4 E(): 2.1e-05%3B 30.2%25 identity in 106 aa overlap;gbkey=CDS;gene=SCD8A.18c;product=hypothetical protein;protein_id=NP_628419.1;transl_table=11
NC_003888.3	RefSeq	gene	4652844	4654775	.	-	.	ID=gene4293;Dbxref=GeneID:1099686;Name=SCD8A.19c;gbkey=Gene;gene=SCD8A.19c;gene_biotype=protein_coding;gene_synonym=SCD8A.19c;locus_tag=SCO4246
NC_003888.3	RefSeq	CDS	4652844	4654775	.	-	0	ID=cds4199;Parent=gene4293;Dbxref=Genbank:NP_628420.1,GeneID:1099686;Name=NP_628420.1;Note=SCD8A.19c%2C unknown%2C len: 643 aa;gbkey=CDS;gene=SCD8A.19c;product=hypothetical protein;protein_id=NP_628420.1;transl_table=11
NC_003888.3	RefSeq	gene	4654775	4655497	.	-	.	ID=gene4294;Dbxref=GeneID:1099687;Name=SCD8A.20c;gbkey=Gene;gene=SCD8A.20c;gene_biotype=protein_coding;gene_synonym=SCD8A.20c;locus_tag=SCO4247
NC_003888.3	RefSeq	CDS	4654775	4655497	.	-	0	ID=cds4200;Parent=gene4294;Dbxref=Genbank:NP_628421.1,GeneID:1099687;Name=NP_628421.1;Note=SCD8A.20c%2C unknown%2C len: 240 aa. Contains Pfam match to entry PF01476 PG_binding_2%2C  peptidoglycan binding domain;gbkey=CDS;gene=SCD8A.20c;product=hypothetical protein;protein_id=NP_628421.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4654786	4654791	.	-	.	ID=id5306;Dbxref=GeneID:1099687;gbkey=RBS;gene=SCD8A.20c
NC_003888.3	RefSeq	sequence_feature	4654799	4654939	.	-	.	ID=id5307;Dbxref=GeneID:1099687;Note=Pfam match to entry PF01476 PG_binding_2%2C  peptidoglycan binding domain%2C score 25.10%2C E-value 0.0017;gbkey=misc_feature;gene=SCD8A.20c
NC_003888.3	RefSeq	ribosome_entry_site	4655505	4655508	.	-	.	ID=id5308;gbkey=RBS
NC_003888.3	RefSeq	gene	4655526	4655948	.	-	.	ID=gene4295;Dbxref=GeneID:1099688;Name=SCD8A.21c;gbkey=Gene;gene=SCD8A.21c;gene_biotype=protein_coding;gene_synonym=SCD8A.21c;locus_tag=SCO4248
NC_003888.3	RefSeq	CDS	4655526	4655948	.	-	0	ID=cds4201;Parent=gene4295;Dbxref=Genbank:NP_628422.1,GeneID:1099688;Name=NP_628422.1;Note=SCD8A.21c%2C unknown%2C len: 140 aa;gbkey=CDS;gene=SCD8A.21c;product=hypothetical protein;protein_id=NP_628422.1;transl_table=11
NC_003888.3	RefSeq	gene	4656193	4656891	.	+	.	ID=gene4296;Dbxref=GeneID:1099689;Name=SCD8A.22;gbkey=Gene;gene=SCD8A.22;gene_biotype=protein_coding;gene_synonym=SCD8A.22;locus_tag=SCO4249
NC_003888.3	RefSeq	CDS	4656193	4656891	.	+	0	ID=cds4202;Parent=gene4296;Dbxref=Genbank:NP_628423.1,GeneID:1099689;Name=NP_628423.1;Note=SCD8A.22%2C unknown%2C len: 232 aa;gbkey=CDS;gene=SCD8A.22;product=hypothetical protein;protein_id=NP_628423.1;transl_table=11
NC_003888.3	RefSeq	gene	4656901	4660236	.	+	.	ID=gene4297;Dbxref=GeneID:1099690;Name=SCD8A.23;gbkey=Gene;gene=SCD8A.23;gene_biotype=protein_coding;gene_synonym=SCD8A.23;locus_tag=SCO4250
NC_003888.3	RefSeq	CDS	4656901	4660236	.	+	0	ID=cds4203;Parent=gene4297;Dbxref=Genbank:NP_628424.1,GeneID:1099690;Name=NP_628424.1;Note=SCD8A.23%2C unknown%2C len: 1111 aa%3B low similarity to C-terminal region of many glycine and alanine rich proteins%2C e.g. TR:Q9BIT7 (EMBL:AF350276) Nephila madagascariensis major ampullate spidroin 2-like protein (fragment) 1953 aa%3B fasta scores: opt: 883 Z-score: 635.4 E(): 9.3e-28%3B 31.167%25 identity in 1123 aa overlap. Rich in glycine and alanine residues;gbkey=CDS;gene=SCD8A.23;product=hypothetical protein;protein_id=NP_628424.1;transl_table=11
NC_003888.3	RefSeq	gene	4660280	4660813	.	-	.	ID=gene4298;Dbxref=GeneID:1099691;Name=SCD8A.24c;gbkey=Gene;gene=SCD8A.24c;gene_biotype=protein_coding;gene_synonym=SCD8A.24c;locus_tag=SCO4251
NC_003888.3	RefSeq	CDS	4660280	4660813	.	-	0	ID=cds4204;Parent=gene4298;Dbxref=Genbank:NP_628425.1,GeneID:1099691;Name=NP_628425.1;Note=SCD8A.24c%2C possible hypothetical protein%2C len: 177 aa. Contains possible N-terminal region signal peptide sequence.;gbkey=CDS;gene=SCD8A.24c;product=hypothetical protein;protein_id=NP_628425.1;transl_table=11
NC_003888.3	RefSeq	gene	4660813	4661262	.	-	.	ID=gene4299;Dbxref=GeneID:1099692;Name=SCD8A.25c;gbkey=Gene;gene=SCD8A.25c;gene_biotype=protein_coding;gene_synonym=SCD8A.25c;locus_tag=SCO4252
NC_003888.3	RefSeq	CDS	4660813	4661262	.	-	0	ID=cds4205;Parent=gene4299;Dbxref=Genbank:NP_628426.1,GeneID:1099692;Name=NP_628426.1;Note=SCD8A.25c%2C unknown%2C len: 149 aa;gbkey=CDS;gene=SCD8A.25c;product=hypothetical protein;protein_id=NP_628426.1;transl_table=11
NC_003888.3	RefSeq	gene	4661315	4662919	.	-	.	ID=gene4300;Dbxref=GeneID:1099693;Name=SCD8A.26c;gbkey=Gene;gene=SCD8A.26c;gene_biotype=protein_coding;gene_synonym=SCD8A.26c;locus_tag=SCO4253
NC_003888.3	RefSeq	CDS	4661315	4662919	.	-	0	ID=cds4206;Parent=gene4300;Dbxref=Genbank:NP_628427.1,GeneID:1099693;Name=NP_628427.1;Note=SCD8A.26c%2C conserved hypothetical protein%2C len: 534 aa%3B similar to TR:Q988X8 (EMBL:AP003009) Rhizobium loti MLR6548 protein%2C 528 aa%3B fasta scores: opt: 1186 Z-score: 1203.4 E(): 2.1e-59%3B 39.963%25 identity in 538 aa overlap;gbkey=CDS;gene=SCD8A.26c;product=hypothetical protein;protein_id=NP_628427.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4662927	4662931	.	-	.	ID=id5309;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4663235	4663239	.	+	.	ID=id5310;gbkey=RBS
NC_003888.3	RefSeq	gene	4663249	4666119	.	+	.	ID=gene4301;Dbxref=GeneID:1099694;Name=SCD8A.27;gbkey=Gene;gene=SCD8A.27;gene_biotype=protein_coding;gene_synonym=SCD8A.27;locus_tag=SCO4254
NC_003888.3	RefSeq	CDS	4663249	4666119	.	+	0	ID=cds4207;Parent=gene4301;Dbxref=Genbank:NP_628428.1,GeneID:1099694;Name=NP_628428.1;Note=SCD8A.27%2C hypothetical protein%2C len: 956 aa%3B similar to C-terminal region of TR:CAB70627 (EMBL:AL137242) Streptomyces coelicolor large Ala/GLu-rich protein SC8F4.01c%2C 1326 aa%3B fasta scores: opt: 319 z-score: 268.7 E(): 1.6e-07%3B 25.1%25 identity in 798 aa overlap and to SW:TOLA_ECOLI (EMBL:M28232) Escherichia coli TolA protein%2C 421 aa%3B fasta scores: opt: 325 z-score: 280.1 E(): 3.6e-08%3B 38.4%25 identity in 255 aa overlap. Contains possible colied-coil region at aprox. residues 96..475. Rich in alanine and glutamic acid residues;gbkey=CDS;gene=SCD8A.27;product=hypothetical protein;protein_id=NP_628428.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4664596	4664721	.	+	.	ID=id5311;Dbxref=GeneID:1099694;Note=High content of alanine%2C glutamic acid and lysine amino acid residues;gbkey=misc_feature;gene=SCD8A.27
NC_003888.3	RefSeq	ribosome_entry_site	4666247	4666250	.	+	.	ID=id5312;gbkey=RBS
NC_003888.3	RefSeq	gene	4666257	4666985	.	+	.	ID=gene4302;Dbxref=GeneID:1099695;Name=SCD8A.28;gbkey=Gene;gene=SCD8A.28;gene_biotype=protein_coding;gene_synonym=SCD8A.28;locus_tag=SCO4255
NC_003888.3	RefSeq	CDS	4666257	4666985	.	+	0	ID=cds4208;Parent=gene4302;Dbxref=Genbank:NP_628429.1,GeneID:1099695;Name=NP_628429.1;Note=SCD8A.28%2C unknown%2C len: 242 aa;gbkey=CDS;gene=SCD8A.28;product=hypothetical protein;protein_id=NP_628429.1;transl_table=11
NC_003888.3	RefSeq	gene	4667076	4668515	.	+	.	ID=gene4303;Dbxref=GeneID:1099696;Name=SCD8A.29;gbkey=Gene;gene=SCD8A.29;gene_biotype=protein_coding;gene_synonym=SCD8A.29;locus_tag=SCO4256
NC_003888.3	RefSeq	CDS	4667076	4668515	.	+	0	ID=cds4209;Parent=gene4303;Dbxref=Genbank:NP_628430.1,GeneID:1099696;Name=NP_628430.1;Note=SCD8A.29%2C possible hydrolytic protein%2C len: 479 aa%3B similar to TR:Q9ZBF7 (EMBL:AL035206) Streptomyces coelicolor  hydrolytic protein SC9B5.23c%2C 464 aa%3B fasta scores: opt: 1820 z-score: 1645.7 E(): 0%3B 70.9%25 identity in 423 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD8A.29;product=hydrolytic protein;protein_id=NP_628430.1;transl_table=11
NC_003888.3	RefSeq	gene	4668591	4670033	.	+	.	ID=gene4304;Dbxref=GeneID:1099697;Name=SCD8A.30;gbkey=Gene;gene=SCD8A.30;gene_biotype=protein_coding;gene_synonym=SCD8A.30;locus_tag=SCO4257
NC_003888.3	RefSeq	CDS	4668591	4670033	.	+	0	ID=cds4210;Parent=gene4304;Dbxref=Genbank:NP_628431.1,GeneID:1099697;Name=NP_628431.1;Note=SCD8A.30%2C possible hydrolytic protein%2C len: 480 aa%3B similar to TR:Q9ZBF7 (EMBL:AL035206) Streptomyces coelicolor  hydrolytic protein SC9B5.23c%2C 464 aa%3B fasta scores: opt: 1760 z-score: 1669.0 E(): 0%3B 63.0%25 identity in 487 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD8A.30;product=hydrolytic protein;protein_id=NP_628431.1;transl_table=11
NC_003888.3	RefSeq	gene	4670132	4671589	.	+	.	ID=gene4305;Dbxref=GeneID:1099698;Name=SCD8A.31;gbkey=Gene;gene=SCD8A.31;gene_biotype=protein_coding;gene_synonym=SCD8A.31;locus_tag=SCO4258
NC_003888.3	RefSeq	CDS	4670132	4671589	.	+	0	ID=cds4211;Parent=gene4305;Dbxref=Genbank:NP_628432.1,GeneID:1099698;Name=NP_628432.1;Note=SCD8A.31%2C possible hydrolytic protein%2C len: 485 aa%3B similar to TR:Q9ZBF7 (EMBL:AL035206) Streptomyces coelicolor  hydrolytic protein SC9B5.23c%2C 464 aa%3B fasta scores: opt: 1832 z-score: 1766.1 E(): 0%3B 66.1%25 identity in 492 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD8A.31;product=hydrolytic protein;protein_id=NP_628432.1;transl_table=11
NC_003888.3	RefSeq	gene	4671614	4673686	.	-	.	ID=gene4306;Dbxref=GeneID:1099699;Name=SCD8A.32c;gbkey=Gene;gene=SCD8A.32c;gene_biotype=protein_coding;gene_synonym=SCD8A.32c;locus_tag=SCO4259
NC_003888.3	RefSeq	CDS	4671614	4673686	.	-	0	ID=cds4212;Parent=gene4306;Dbxref=Genbank:NP_628433.1,GeneID:1099699;Name=NP_628433.1;Note=SCD8A.32c%2C possible AAA family ATPase%2C len: 690 aa%3B C-terminal region similar to TR:CAB74213 (EMBL:AL139075) Campylobacter jejuni probable AAA family ATPase CJ0377%2C 570 aa%3B fasta scores: opt: 378 z-score: 402.0 E(): 5.8e-15%3B 28.9%25 identity in 256 aa overlap and to SW:YB56_METJA (EMBL:U67557) Methanococcus jannaschii cell division cycle protein 48 homolog MJ1156%2C 903 aa%3B fasta scores: opt: 278 z-score: 293.2 E(): 6.7e-09%3B 30.4%25 identity in 240 aa overlap. Contains Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA) and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD8A.32c;product=ATPase AAA;protein_id=NP_628433.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4671707	4672249	.	-	.	ID=id5313;Dbxref=GeneID:1099699;Note=Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA)%2C score 87.60%2C E-value 2.4e-22;gbkey=misc_feature;gene=SCD8A.32c
NC_003888.3	RefSeq	sequence_feature	4672211	4672234	.	-	.	ID=id5314;Dbxref=GeneID:1099699;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD8A.32c
NC_003888.3	RefSeq	gene	4673692	4674369	.	-	.	ID=gene4307;Dbxref=GeneID:1099700;Name=SCD49.01c;gbkey=Gene;gene=SCD49.01c;gene_biotype=protein_coding;gene_synonym=SCD49.01c,SCD8A.33c;locus_tag=SCO4260
NC_003888.3	RefSeq	CDS	4673692	4674369	.	-	0	ID=cds4213;Parent=gene4307;Dbxref=Genbank:NP_733632.1,GeneID:1099700;Name=NP_733632.1;Note=SCD49.01c%2C hypothetical protein (fragment)%2C len: >115 aa%3B N-terminal part of TR:CAB77354 (EMBL:AL160331) Streptomyces coelicolor hypothetical 24.5 kD protein (fragment) SCD8A.33c%2C 224 aa and similar to TR:P96262 (EMBL:Z84724) Mycobacterium tuberculosis hypothetical 7.4 kD protein MTCY22G10.13%2C 68 aa%3B fasta scores: opt: 71 z-score: 131.0 E(): 8%3B 41.0%25 identity in 39 aa overlap~SCD8A.33c%2C unknown (fragment)%2C len: >224 aa;gbkey=CDS;gene=SCD49.01c;product=hypothetical protein;protein_id=NP_733632.1;transl_table=11
NC_003888.3	RefSeq	gene	4674563	4675222	.	-	.	ID=gene4308;Dbxref=GeneID:1099701;Name=SCD49.02c;gbkey=Gene;gene=SCD49.02c;gene_biotype=protein_coding;gene_synonym=SCD49.02c;locus_tag=SCO4261
NC_003888.3	RefSeq	CDS	4674563	4675222	.	-	0	ID=cds4214;Parent=gene4308;Dbxref=Genbank:NP_628434.1,GeneID:1099701;Name=NP_628434.1;Note=SCD49.02c%2C possible response regulator%2C len: 219 aa%3B similar to TR:O53646 (EMBL:AL021928) Mycobacterium tuberculosis  response regulator MTV0033.03%2C 211 aa%3B fasta scores: opt: 383 z-score: 449.9 E(): 1.4e-17%3B 35.6%25 identity in 208 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family;gbkey=CDS;gene=SCD49.02c;product=response regulator;protein_id=NP_628434.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4674566	4674757	.	-	.	ID=id5315;Dbxref=GeneID:1099701;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 46.20%2C E-value 7.2e-10;gbkey=misc_feature;gene=SCD49.02c
NC_003888.3	RefSeq	gene	4675239	4675586	.	+	.	ID=gene4309;Dbxref=GeneID:1099702;Name=SCD49.03;gbkey=Gene;gene=SCD49.03;gene_biotype=protein_coding;gene_synonym=SCD49.03;locus_tag=SCO4262
NC_003888.3	RefSeq	CDS	4675239	4675586	.	+	0	ID=cds4215;Parent=gene4309;Dbxref=Genbank:NP_628435.1,GeneID:1099702;Name=NP_628435.1;Note=SCD49.03%2C unknown%2C len: 115 aa%3B doubtful CDS. Contains a TTA leucine codon%2C possible target for bldA regulation and high %25G+C (70.43);gbkey=CDS;gene=SCD49.03;product=hypothetical protein;protein_id=NP_628435.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4675341	4675343	.	+	.	ID=id5316;Dbxref=GeneID:1099702;Note=TTA leucine codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCD49.03
NC_003888.3	RefSeq	gene	4675583	4679338	.	+	.	ID=gene4310;Dbxref=GeneID:1099703;Name=SCD49.04;gbkey=Gene;gene=SCD49.04;gene_biotype=protein_coding;gene_synonym=SCD49.04;locus_tag=SCO4263
NC_003888.3	RefSeq	CDS	4675583	4679338	.	+	0	ID=cds4216;Parent=gene4310;Dbxref=Genbank:NP_628436.1,GeneID:1099703;Name=NP_628436.1;Note=SCD49.04%2C possible transcriptional regulatory protein%2C len: 1251 aa%3B N-terminal domain similar to TR:Q9RD3 (EMBL:AL133422) Streptomyces coelicolor transcriptional regulatory protein SCM1.10%2C 888 aa%3B blastp scores: Score %3D 154 (54.2 bits)%2C Expect %3D 5.7e-15%2C Sum P(2) %3D 5.7e-15 Identities %3D 120/425 (28%25)%2C Positives %3D 176/425 (41%25) and C-terminal domain similar to TR:Q9ZGI0 (EMBL:AF079139) Streptomyces venezuelae  transcriptional activator PkiD%2C 928 aa%3B fasta scores: opt: 602 z-score: 498.1 E(): 2.9e-20%3B 29.0%25 identity in 815 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Contains a helix-turn-helix motif at residues 1196..1217 (+3.89 SD)%2C also a TTA leucine codon%2C possible target for bldA regulation and 4x degenerate repeat unit: (A/S)(A/S)AP(G/D)AAYXQAP(P/S)SDG(A/V)Y;gbkey=CDS;gene=SCD49.04;product=transcriptional regulator;protein_id=NP_628436.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4676006	4676008	.	+	.	ID=id5317;Dbxref=GeneID:1099703;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD49.04
NC_003888.3	RefSeq	repeat_region	4676465	4676965	.	+	.	ID=id5318;Dbxref=GeneID:1099703;Note=4x degenerate repeat unit translated in SCD49.04;gbkey=repeat_region;gene=SCD49.04
NC_003888.3	RefSeq	sequence_feature	4679114	4679311	.	+	.	ID=id5319;Dbxref=GeneID:1099703;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 44.60%2C E-value 2.3e-09;gbkey=misc_feature;gene=SCD49.04
NC_003888.3	RefSeq	sequence_feature	4679165	4679248	.	+	.	ID=id5320;Dbxref=GeneID:1099703;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCD49.04
NC_003888.3	RefSeq	gene	4679364	4680236	.	-	.	ID=gene4311;Dbxref=GeneID:1099704;Name=SCD49.05c;gbkey=Gene;gene=SCD49.05c;gene_biotype=protein_coding;gene_synonym=SCD49.05c,SCD86A.01c;locus_tag=SCO4264
NC_003888.3	RefSeq	CDS	4679364	4680236	.	-	0	ID=cds4217;Parent=gene4311;Dbxref=Genbank:NP_733633.1,GeneID:1099704;Name=NP_733633.1;Note=SCD86A.01c%2C aminoglycoside phosphotransferase (fragment)%2C len: >101 aa%3B highly similar to SW:HUR_STRAU (EMBL:M81739) Streptomyces aureofaciens hydroxyurea phosphotransferase (EC 2.7.-.-) Hur%2C 340 aa%3B fasta scores: opt: 413 z-score: 532.0 E(): 3.7e-22%3B 63.0%25 identity in 100 aa overlap~SCD49.05c%2C probable aminoglycoside phosphotransferase (fragment)%2C len: >223 aa%3B highly similar to SW:HUR_STRAU (EMBL:M81739) Streptomyces aureofaciens hydroxyurea phosphotransferase (EC 2.7.-.-) Hur%2C 340 aa%3B fasta scores: opt: 900 z-score: 1065.5 E(): 0%3B 61.1%25 identity in 221 aa overlap;gbkey=CDS;gene=SCD49.05c;product=aminoglycoside phosphotransferase;protein_id=NP_733633.1;transl_table=11
NC_003888.3	RefSeq	gene	4680295	4681806	.	-	.	ID=gene4312;Dbxref=GeneID:1099705;Name=SCD86A.02c;gbkey=Gene;gene=SCD86A.02c;gene_biotype=protein_coding;gene_synonym=SCD86A.02c;locus_tag=SCO4265
NC_003888.3	RefSeq	CDS	4680295	4681806	.	-	0	ID=cds4218;Parent=gene4312;Dbxref=Genbank:NP_628437.1,GeneID:1099705;Name=NP_628437.1;Note=SCD86A.02c%2C probable transport integral membrane protein%2C len: 503 aa%3B similar to SW:PUR8_STRLP (EMBL:X76855) Streptomyces lipmanii puromycin resistance protein Pur8%2C 503 aa%3B fasta scores: opt: 1772 z-score: 1875.8 E(): 0%3B 56.4%25 identity in 491 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and match to Prosite entry PS00216 Sugar transport proteins signature 1. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD86A.02c;product=transport integral membrane protein;protein_id=NP_628437.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4680319	4681737	.	-	.	ID=id5321;Dbxref=GeneID:1099705;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -90.90%2C E-value 0.0013;gbkey=misc_feature;gene=SCD86A.02c
NC_003888.3	RefSeq	sequence_feature	4681522	4681572	.	-	.	ID=id5322;Dbxref=GeneID:1099705;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCD86A.02c
NC_003888.3	RefSeq	gene	4681886	4682866	.	-	.	ID=gene4313;Dbxref=GeneID:1099706;Name=SCD86A.03c;gbkey=Gene;gene=SCD86A.03c;gene_biotype=protein_coding;gene_synonym=SCD86A.03c;locus_tag=SCO4266
NC_003888.3	RefSeq	CDS	4681886	4682866	.	-	0	ID=cds4219;Parent=gene4313;Dbxref=Genbank:NP_628438.1,GeneID:1099706;Name=NP_628438.1;Note=SCD86A.03c%2C probable oxidoreductase%2C len: 340 aa%3B similar to TR:Q53927 (EMBL:X62373) Streptomyces coelicolor genes for hydroxyacyl-CoA dehydrogenase%2C 329 aa%3B fasta scores: opt: 635 z-score: 652.9 E(): 6.7e-29%3B 37.9%25 identity in 335 aa overlap and to SW:QOR_ECOLI (EMBL:L02312) Escherichia coli quinone oxidoreductase (EC 1.6.5.5) Qor%2C 327 aa%3B fasta scores: opt: 395 z-score: 410.1 E(): 2.2e-15%3B 30.7%25 identity in 339 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SCD86A.03c;product=oxidoreductase;protein_id=NP_628438.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4681889	4682827	.	-	.	ID=id5323;Dbxref=GeneID:1099706;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 150.10%2C E-value 3.8e-41;gbkey=misc_feature;gene=SCD86A.03c
NC_003888.3	RefSeq	gene	4682918	4684078	.	-	.	ID=gene4314;Dbxref=GeneID:1099707;Name=SCD86A.04c;gbkey=Gene;gene=SCD86A.04c;gene_biotype=protein_coding;gene_synonym=SCD86A.04c;locus_tag=SCO4267
NC_003888.3	RefSeq	CDS	4682918	4684078	.	-	0	ID=cds4220;Parent=gene4314;Dbxref=Genbank:NP_628439.1,GeneID:1099707;Name=NP_628439.1;Note=SCD86A.04c%2C hypothetical protein%2C len: 386 aa%3B similar to TR:O06003 (EMBL:X86552) Bradyrhizobium japonicum hypothetical 46.6 kD protein%2C 439 aa%3B fasta scores: opt: 153 z-score: 175.4 E(): 0.027%3B 31.3%25 identity in 201 aa overlap;gbkey=CDS;gene=SCD86A.04c;product=hypothetical protein;protein_id=NP_628439.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4684089	4684092	.	-	.	ID=id5324;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4684153	4684156	.	+	.	ID=id5325;gbkey=RBS
NC_003888.3	RefSeq	gene	4684159	4684947	.	+	.	ID=gene4315;Dbxref=GeneID:1099708;Name=SCD86A.05;gbkey=Gene;gene=SCD86A.05;gene_biotype=protein_coding;gene_synonym=SCD86A.05,SCD95A.01;locus_tag=SCO4268
NC_003888.3	RefSeq	CDS	4684159	4684947	.	+	0	ID=cds4221;Parent=gene4315;Dbxref=Genbank:NP_628440.1,GeneID:1099708;Name=NP_628440.1;Note=SCD95A.01%2C unknown (fragment)%2C len: >25 aa~SCD86A.05%2C hypothetical protein %2C len: 262 aa%3B similar to SW:Y516_SYNY3 (EMBL:D64004) Synechocystis sp. hypothetical 17.9 kDa protein SLR0516%2C 166 aa%3B fasta scores: opt: 177 z-score: 209.9 E(): 0.00032%3B 34.5%25 identity in 142 aa overlap. Contains 3x Pfam matches to entry PF00805 Pentapeptide%2C Pentapeptide repeats (8 copies);gbkey=CDS;gene=SCD86A.05;product=hypothetical protein;protein_id=NP_628440.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4684444	4684563	.	+	.	ID=id5326;Dbxref=GeneID:1099708;Note=Pfam match to entry PF00805 Pentapeptide%2C Pentapeptide repeats (8 copies)%2C score 9.30%2C E-value 0.38;gbkey=misc_feature;gene=SCD86A.05
NC_003888.3	RefSeq	sequence_feature	4684564	4684683	.	+	.	ID=id5327;Dbxref=GeneID:1099708;Note=Pfam match to entry PF00805 Pentapeptide%2C Pentapeptide repeats (8 copies)%2C score 13.70%2C E-value 0.14;gbkey=misc_feature;gene=SCD86A.05
NC_003888.3	RefSeq	sequence_feature	4684714	4684842	.	+	.	ID=id5328;Dbxref=GeneID:1099708;Note=Pfam match to entry PF00805 Pentapeptide%2C Pentapeptide repeats (8 copies)%2C score 9.70%2C E-value 0.35;gbkey=misc_feature;gene=SCD86A.05
NC_003888.3	RefSeq	gene	4684959	4685459	.	-	.	ID=gene4316;Dbxref=GeneID:1099709;Name=SCD95A.02c;gbkey=Gene;gene=SCD95A.02c;gene_biotype=protein_coding;gene_synonym=SCD95A.02c;locus_tag=SCO4269
NC_003888.3	RefSeq	CDS	4684959	4685459	.	-	0	ID=cds4222;Parent=gene4316;Dbxref=Genbank:NP_628441.1,GeneID:1099709;Name=NP_628441.1;Note=SCD95A.02c%2C unknown%2C len: 166 aa;gbkey=CDS;gene=SCD95A.02c;product=hypothetical protein;protein_id=NP_628441.1;transl_table=11
NC_003888.3	RefSeq	gene	4685643	4686242	.	-	.	ID=gene4317;Dbxref=GeneID:1099710;Name=SCD95A.03c;gbkey=Gene;gene=SCD95A.03c;gene_biotype=protein_coding;gene_synonym=SCD95A.03c;locus_tag=SCO4270
NC_003888.3	RefSeq	CDS	4685643	4686242	.	-	0	ID=cds4223;Parent=gene4317;Dbxref=Genbank:NP_628442.1,GeneID:1099710;Name=NP_628442.1;Note=SCD95A.03c%2C possible transcriptional regulator%2C len: 199 aa%3B similar to TR:CAB53122 (EMBL:AL109962) Streptomyces coelicolor  transcriptional regulatory protein SCJ1.04%2C 207 aa%3B fasta scores: opt: 154 z-score: 202.7 E(): 0.00079%3B 36.4%25 identity in 77 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SCD95A.03c;product=transcriptional regulator;protein_id=NP_628442.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4686042	4686182	.	-	.	ID=id5329;Dbxref=GeneID:1099710;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 34.80%2C E-value 6.3e-08;gbkey=misc_feature;gene=SCD95A.03c
NC_003888.3	RefSeq	ribosome_entry_site	4686243	4686246	.	-	.	ID=id5330;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4686348	4686353	.	+	.	ID=id5331;gbkey=RBS
NC_003888.3	RefSeq	gene	4686358	4687494	.	+	.	ID=gene4318;Dbxref=GeneID:1099711;Name=SCD95A.04;gbkey=Gene;gene=SCD95A.04;gene_biotype=protein_coding;gene_synonym=SCD95A.04;locus_tag=SCO4271
NC_003888.3	RefSeq	CDS	4686358	4687494	.	+	0	ID=cds4224;Parent=gene4318;Dbxref=Genbank:NP_628443.1,GeneID:1099711;Name=NP_628443.1;Note=SCD95A.04%2C probable NADP-dependent alcohol dehydrogenase%2C len: 378 aa%3B similar to SW:ADH_MYCTU (EMBL:AL021287) Mycobacterium tuberculosis NADP-dependent alcohol dehydrogenase (EC 1.1.1.2) Adh%2C 346 aa%3B fasta scores: opt: 986 z-score: 1074.5 E(): 0%3B 45.0%25 identity in 349 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and match to Prosite entry PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=CDS;gene=SCD95A.04;product=NADP-dependent alcohol dehydrogenase;protein_id=NP_628443.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4686364	4687383	.	+	.	ID=id5332;Dbxref=GeneID:1099711;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 299.10%2C E-value 5.5e-86;gbkey=misc_feature;gene=SCD95A.04
NC_003888.3	RefSeq	sequence_feature	4686463	4686480	.	+	.	ID=id5333;Dbxref=GeneID:1099711;Note=PS00190 Cytochrome c family heme-binding site signature;gbkey=misc_feature;gene=SCD95A.04
NC_003888.3	RefSeq	sequence_feature	4686541	4686585	.	+	.	ID=id5334;Dbxref=GeneID:1099711;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=SCD95A.04
NC_003888.3	RefSeq	gene	4687504	4688475	.	+	.	ID=gene4319;Dbxref=GeneID:1099712;Name=SCD95A.05;gbkey=Gene;gene=SCD95A.05;gene_biotype=protein_coding;gene_synonym=SCD95A.05;locus_tag=SCO4272
NC_003888.3	RefSeq	CDS	4687504	4688475	.	+	0	ID=cds4225;Parent=gene4319;Dbxref=Genbank:NP_628444.1,GeneID:1099712;Name=NP_628444.1;Note=SCD95A.05%2C possible mutT-like protein%2C len: 323 aa%3B similar to TR:O69888 (EMBL:AL023797) Streptomyces coelicolor hypothetical 19.4 kD protein SC2E1.17 or MutT%2C 172 aa%3B fasta scores: opt: 266 z-score: 322.5 E(): 1.7e-10%3B 39.3%25 identity in 145 aa overlap. Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and match to Prosite entry PS00893 mutT domain signature. High content in alanine and leucine amino acid residues;gbkey=CDS;gene=SCD95A.05;product=mutT-like protein;protein_id=NP_628444.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4688080	4688205	.	+	.	ID=id5335;Dbxref=GeneID:1099712;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 33.50%2C E-value 4.1e-08;gbkey=misc_feature;gene=SCD95A.05
NC_003888.3	RefSeq	sequence_feature	4688137	4688196	.	+	.	ID=id5336;Dbxref=GeneID:1099712;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SCD95A.05
NC_003888.3	RefSeq	gene	4688500	4689921	.	-	.	ID=gene4320;Dbxref=GeneID:1099713;Name=SCD95A.06c;gbkey=Gene;gene=SCD95A.06c;gene_biotype=protein_coding;gene_synonym=SCD95A.06c;locus_tag=SCO4273
NC_003888.3	RefSeq	CDS	4688500	4689921	.	-	0	ID=cds4226;Parent=gene4320;Dbxref=Genbank:NP_628445.1,GeneID:1099713;Name=NP_628445.1;Note=SCD95A.06c%2C possible metallopeptidase%2C len: 473 aa%3B similar to TR:Q9X7P2 (EMBL:AL049587) Streptomyces coelicolor  metallopeptidase SC5F2A.19c%2C 506 aa%3B fasta scores: opt: 1253 z-score: 1353.9 E(): 0%3B 42.6%25 identity in 479 aa overlap and to N-terminal domain of SW:AMPN_LACHE (EMBL:U08224) Lactobacillus helveticus aminopeptidase N (EC 3.4.11.2)%2C PepN%2C 844 aa%3B fasta scores: opt: 310 z-score: 333.8 E(): 3.9e-11%3B 27.9%25 identity in 451 aa overlap. Contains Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1 and matches to Prosite entries PS00013 Prokaryotic membrane lipoprotein lipid attachment site (correctly situated) and PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature. Contains also a possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD95A.06c;product=metallopeptidase;protein_id=NP_628445.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4688704	4689771	.	-	.	ID=id5337;Dbxref=GeneID:1099713;Note=Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1%2C score -60.70%2C E-value 4.1e-08;gbkey=misc_feature;gene=SCD95A.06c
NC_003888.3	RefSeq	sequence_feature	4688947	4688976	.	-	.	ID=id5338;Dbxref=GeneID:1099713;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SCD95A.06c
NC_003888.3	RefSeq	sequence_feature	4689865	4689897	.	-	.	ID=id5339;Dbxref=GeneID:1099713;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD95A.06c
NC_003888.3	RefSeq	gene	4690003	4690572	.	-	.	ID=gene4321;Dbxref=GeneID:1099714;Name=SCD95A.07c;gbkey=Gene;gene=SCD95A.07c;gene_biotype=protein_coding;gene_synonym=SCD95A.07c;locus_tag=SCO4274
NC_003888.3	RefSeq	CDS	4690003	4690572	.	-	0	ID=cds4227;Parent=gene4321;Dbxref=Genbank:NP_628446.1,GeneID:1099714;Name=NP_628446.1;Note=SCD95A.07c%2C possible hypothetical protein%2C len: 189 aa%3B similar to TR:CAA74718 (EMBL:Y14336) Streptomyces reticuli  extracellular protein containing predicted 35 aa signal peptide precursor%2C 188 aa%3B fasta scores: opt: 773 z-score: 786.2 E(): 0%3B 66.3%25 identity in 187 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD95A.07c;product=hypothetical protein;protein_id=NP_628446.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4690582	4690586	.	-	.	ID=id5340;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4690807	4690812	.	+	.	ID=id5341;gbkey=RBS
NC_003888.3	RefSeq	gene	4690823	4692109	.	+	.	ID=gene4322;Dbxref=GeneID:1099715;Name=SCD95A.08;gbkey=Gene;gene=SCD95A.08;gene_biotype=protein_coding;gene_synonym=SCD95A.08;locus_tag=SCO4275
NC_003888.3	RefSeq	CDS	4690823	4692109	.	+	0	ID=cds4228;Parent=gene4322;Dbxref=Genbank:NP_628447.1,GeneID:1099715;Name=NP_628447.1;Note=SCD95A.08%2C probable histidine autokinase%2C len: 428 aa%3B highly similar to TR:CAA74719 (EMBL:Y14336) Streptomyces reticuli histidine autokinase SenS%2C 398 aa%3B fasta scores: opt: 1703 z-score: 1743.6 E(): 0%3B 68.7%25 identity in 396 aa overlap. Contains possible hydrophobic membrane spanning regions in N-terminal domain;gbkey=CDS;gene=SCD95A.08;product=histidine autokinase;protein_id=NP_628447.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4692093	4692098	.	+	.	ID=id5342;Dbxref=GeneID:1099715;gbkey=RBS;gene=SCD95A.08
NC_003888.3	RefSeq	gene	4692106	4692777	.	+	.	ID=gene4323;Dbxref=GeneID:1099716;Name=SCD95A.09;gbkey=Gene;gene=SCD95A.09;gene_biotype=protein_coding;gene_synonym=SCD95A.09;locus_tag=SCO4276
NC_003888.3	RefSeq	CDS	4692106	4692777	.	+	0	ID=cds4229;Parent=gene4323;Dbxref=Genbank:NP_628448.1,GeneID:1099716;Name=NP_628448.1;Note=SCD95A.09%2C probable respose regulatory protein%2C len: 223 aa%3B highly similar to TR:CAA74720 (EMBL:Y14336) Streptomyces reticuli respose regulatory protein SenR%2C 217 aa%3B fasta scores: opt: 1066 z-score: 1252.4 E(): 0%3B 80.4%25 identity in 219 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Contains also possible helix-turn-helix motif at residues 177..198 (+4.22 SD);gbkey=CDS;gene=SCD95A.09;product=response regulatory protein;protein_id=NP_628448.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4692145	4692504	.	+	.	ID=id5343;Dbxref=GeneID:1099716;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 114.50%2C E-value 2e-30;gbkey=misc_feature;gene=SCD95A.09
NC_003888.3	RefSeq	sequence_feature	4692580	4692774	.	+	.	ID=id5344;Dbxref=GeneID:1099716;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 79.60%2C E-value 6.3e-20;gbkey=misc_feature;gene=SCD95A.09
NC_003888.3	RefSeq	sequence_feature	4692631	4692714	.	+	.	ID=id5345;Dbxref=GeneID:1099716;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCD95A.09
NC_003888.3	RefSeq	gene	4692883	4693458	.	-	.	ID=gene4324;Dbxref=GeneID:1099717;Name=SCD95A.10c;gbkey=Gene;gene=SCD95A.10c;gene_biotype=protein_coding;gene_synonym=SCD95A.10c;locus_tag=SCO4277
NC_003888.3	RefSeq	CDS	4692883	4693458	.	-	0	ID=cds4230;Parent=gene4324;Dbxref=Genbank:NP_628449.1,GeneID:1099717;Name=NP_628449.1;Note=SCD95A.10c%2C possible tellurium resistance protein%2C len: 191 aa%3B highly similar to many tellurium resistance related proteins%2C e.g. SW:TERE_SERMA (EMBL:L38824) Serratia marcescens tellurium resistance protein TerE%2C 191 aa%3B fasta scores: opt: 864 z-score: 1027.3 E(): 0%3B 65.4%25 identity in 191 aa overlap and to TR:CAB62770 (EMBL:AL133424) Streptomyces coelicolor SCF56.25 tellurium resistance protein TerD (fragment)%2C 185 aa%3B fasta scores: opt: 950 z-score: 1104.7 E(): 0%3B 75.0%25 identity in 184 aa overlap;gbkey=CDS;gene=SCD95A.10c;product=tellurium resistance protein;protein_id=NP_628449.1;transl_table=11
NC_003888.3	RefSeq	gene	4693616	4694053	.	+	.	ID=gene4325;Dbxref=GeneID:1099718;Name=SCD95A.11;gbkey=Gene;gene=SCD95A.11;gene_biotype=protein_coding;gene_synonym=SCD95A.11;locus_tag=SCO4278
NC_003888.3	RefSeq	CDS	4693616	4694053	.	+	0	ID=cds4231;Parent=gene4325;Dbxref=Genbank:NP_628450.1,GeneID:1099718;Name=NP_628450.1;Note=SCD95A.11%2C hypothetical protein%2C len: 145 aa%3B similar to SW:YAEJ_ECOLI (EMBL:L38619) Escherichia coli hypothetical 15.6 kD protein in MesJ-CutF intergenic region (ORF140) YaeJ%2C 140 aa%3B fasta scores: opt: 338 z-score: 405.8 E(): 3.8e-15%3B 45.7%25 identity in 138 aa overlap. Contains Pfam match to entry PF00472 RF-1%2C Peptidyl-tRNA hydrolase domain and match to Prosite entry PS00745 Prokaryotic-type class I peptide chain release factors signature;gbkey=CDS;gene=SCD95A.11;product=peptidyl-tRNA hydrolase domain-containing protein;protein_id=NP_628450.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4693634	4694032	.	+	.	ID=id5346;Dbxref=GeneID:1099718;Note=Pfam match to entry PF00472 RF-1%2C Peptidyl-tRNA hydrolase domain%2C score 45.60%2C E-value 1.1e-09;gbkey=misc_feature;gene=SCD95A.11
NC_003888.3	RefSeq	sequence_feature	4693694	4693744	.	+	.	ID=id5347;Dbxref=GeneID:1099718;Note=PS00745 Prokaryotic-type class I peptide chain release factors signature;gbkey=misc_feature;gene=SCD95A.11
NC_003888.3	RefSeq	gene	4694071	4694541	.	-	.	ID=gene4326;Dbxref=GeneID:1099719;Name=SCD95A.12c;gbkey=Gene;gene=SCD95A.12c;gene_biotype=protein_coding;gene_synonym=SCD95A.12c;locus_tag=SCO4279
NC_003888.3	RefSeq	CDS	4694071	4694541	.	-	0	ID=cds4232;Parent=gene4326;Dbxref=Genbank:NP_628451.1,GeneID:1099719;Name=NP_628451.1;Note=SCD95A.12c%2C possible acetyltransferase%2C len: 156 aa%3B similar to TR:AAF22297 (EMBL:AF185569) Rattus norvegicus  N-acetyltransferase camello 2%2C Cml2%2C 221 aa%3B fasta scores: opt: 125 z-score: 168.1 E(): 0.067 23.6%25 identity in 123 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCD95A.12c;product=acetyltransferase;protein_id=NP_628451.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4694125	4694517	.	-	.	ID=id5348;Dbxref=GeneID:1099719;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 16.80%2C E-value 0.025;gbkey=misc_feature;gene=SCD95A.12c
NC_003888.3	RefSeq	gene	4694592	4695200	.	-	.	ID=gene4327;Dbxref=GeneID:1099720;Name=SCD95A.13c;gbkey=Gene;gene=SCD95A.13c;gene_biotype=protein_coding;gene_synonym=SCD95A.13c;locus_tag=SCO4280
NC_003888.3	RefSeq	CDS	4694592	4695200	.	-	0	ID=cds4233;Parent=gene4327;Dbxref=Genbank:NP_628452.1,GeneID:1099720;Name=NP_628452.1;Note=SCD95A.13c%2C probable reductase%2C len: 202 aa%3B similar to SW:DIM6_STRCO (EMBL:X63449) Streptomyces coelicolor actinorhidin polyketide dimerase ActVB%2C 177 aa%3B fasta scores: opt: 256 z-score: 298.4 E(): 3.7e-09%3B 37.3%25 identity in 166 aa overlap. Contains Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain;gbkey=CDS;gene=SCD95A.13c;product=reductase;protein_id=NP_628452.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4694595	4695083	.	-	.	ID=id5349;Dbxref=GeneID:1099720;Note=Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain%2C score 162.00%2C E-value 1e-44;gbkey=misc_feature;gene=SCD95A.13c
NC_003888.3	RefSeq	ribosome_entry_site	4695525	4695529	.	+	.	ID=id5350;gbkey=RBS
NC_003888.3	RefSeq	gene	4695536	4697197	.	+	.	ID=gene4328;Dbxref=GeneID:1099721;Name=SCD95A.14;gbkey=Gene;gene=SCD95A.14;gene_biotype=protein_coding;gene_synonym=SCD95A.14;locus_tag=SCO4281
NC_003888.3	RefSeq	CDS	4695536	4697197	.	+	0	ID=cds4234;Parent=gene4328;Dbxref=Genbank:NP_628453.1,GeneID:1099721;Name=NP_628453.1;Note=SCD95A.14%2C hypothetical protein%2C len: 553 aa%3B similar to TR:AAF10046 (EMBL:AE001906) Deinococcus radiodurans sensory Box/GgdEF family protein%2C 805 aa%3B fasta scores: opt: 280 z-score: 304.9 E(): 1.6e-09%3B 28.6%25 identity in 364 aa overlap. Contains Pfam match to entry PF01590 GAF%2C GAF domain%2C PF00989 PAS%2C PAS domain%2C PF00785 PAC%2C PAC motif and PF00990 DUF9%2C Domain of unknown function. Contains also possible coiled-coil region at aprox. residues 197..214. High content in alanine and arginine amino acid residues;gbkey=CDS;gene=SCD95A.14;product=hypothetical protein;protein_id=NP_628453.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4695620	4696117	.	+	.	ID=id5351;Dbxref=GeneID:1099721;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 40.30%2C E-value 4.2e-08;gbkey=misc_feature;gene=SCD95A.14
NC_003888.3	RefSeq	sequence_feature	4696247	4696390	.	+	.	ID=id5352;Dbxref=GeneID:1099721;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 18.40%2C E-value 0.0018;gbkey=misc_feature;gene=SCD95A.14
NC_003888.3	RefSeq	sequence_feature	4696394	4696522	.	+	.	ID=id5353;Dbxref=GeneID:1099721;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 28.10%2C E-value 2.3e-06;gbkey=misc_feature;gene=SCD95A.14
NC_003888.3	RefSeq	sequence_feature	4696532	4697179	.	+	.	ID=id5354;Dbxref=GeneID:1099721;Note=Pfam match to entry PF00990 DUF9%2C Domain of unknown function%2C score 96.90%2C E-value 4e-25;gbkey=misc_feature;gene=SCD95A.14
NC_003888.3	RefSeq	ribosome_entry_site	4697306	4697310	.	+	.	ID=id5355;gbkey=RBS
NC_003888.3	RefSeq	gene	4697318	4698292	.	+	.	ID=gene4329;Dbxref=GeneID:1099722;Name=SCD95A.15;gbkey=Gene;gene=SCD95A.15;gene_biotype=protein_coding;gene_synonym=SCD95A.15;locus_tag=SCO4282
NC_003888.3	RefSeq	CDS	4697318	4698292	.	+	0	ID=cds4235;Parent=gene4329;Dbxref=Genbank:NP_628454.1,GeneID:1099722;Name=NP_628454.1;Note=SCD95A.15%2C hypothetical dimeric protein%2C len: 324 aa. Contains match to Prosite entry PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature and possible hydrophobic region in the same position. High content in alanine and glycine amino acid residues. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD95A.15;product=dimeric protein;protein_id=NP_628454.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4697684	4697731	.	+	.	ID=id5356;Dbxref=GeneID:1099722;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=misc_feature;gene=SCD95A.15
NC_003888.3	RefSeq	gene	4698343	4699275	.	-	.	ID=gene4330;Dbxref=GeneID:1099723;Name=SCD95A.16c;gbkey=Gene;gene=SCD95A.16c;gene_biotype=protein_coding;gene_synonym=SCD95A.16c;locus_tag=SCO4283
NC_003888.3	RefSeq	CDS	4698343	4699275	.	-	0	ID=cds4236;Parent=gene4330;Dbxref=Genbank:NP_628455.1,GeneID:1099723;Name=NP_628455.1;Note=SCD95A.16c%2C probable sugar kinase%2C len: 310 aa%3B similar to SW:LACC_LACLA (EMBL:M60447) Lactococcus lactis tagatose-6-phosphate kinase (EC 2.7.1.144) (phosphotagatokinase) LacC%2C 310 aa%3B fasta scores: opt: 559 z-score: 579.1 E(): 8.5e-25%3B 35.9%25 identity in 304 aa overlap. Contains Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase and match to Prosite entry PS00583 pfkB family of carbohydrate kinases signature 1 and PS00584 pfkB family of carbohydrate kinases signature 2;gbkey=CDS;gene=SCD95A.16c;product=sugar kinase;protein_id=NP_628455.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4698508	4698549	.	-	.	ID=id5357;Dbxref=GeneID:1099723;Note=PS00584 pfkB family of carbohydrate kinases signature 2;gbkey=misc_feature;gene=SCD95A.16c
NC_003888.3	RefSeq	sequence_feature	4698514	4699170	.	-	.	ID=id5358;Dbxref=GeneID:1099723;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 131.70%2C E-value 2.2e-40;gbkey=misc_feature;gene=SCD95A.16c
NC_003888.3	RefSeq	sequence_feature	4699096	4699170	.	-	.	ID=id5359;Dbxref=GeneID:1099723;Note=PS00583 pfkB family of carbohydrate kinases signature 1;gbkey=misc_feature;gene=SCD95A.16c
NC_003888.3	RefSeq	sequence_feature	4699099	4699131	.	-	.	ID=id5360;Dbxref=GeneID:1099723;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site;gbkey=misc_feature;gene=SCD95A.16c
NC_003888.3	RefSeq	ribosome_entry_site	4699284	4699288	.	-	.	ID=id5361;gbkey=RBS
NC_003888.3	RefSeq	gene	4699398	4700543	.	-	.	ID=gene4331;Dbxref=GeneID:1099724;Name=SCD95A.17c;gbkey=Gene;gene=SCD95A.17c;gene_biotype=protein_coding;gene_synonym=SCD95A.17c;locus_tag=SCO4284
NC_003888.3	RefSeq	CDS	4699398	4700543	.	-	0	ID=cds4237;Parent=gene4331;Dbxref=Genbank:NP_628456.1,GeneID:1099724;Name=NP_628456.1;Note=SCD95A.17c%2C probable N-acetylglucosamine-6-phosphate deacetylase%2C len: 381 aa%3B similar to SW:NAGA_BACSU (EMBL:AF017113) Bacillus subtilis N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) NagA%2C 396 aa%3B fasta scores: opt: 656 z-score: 741.7 E(): 0%3B 34.5%25 identity in 386 aa overlap;gbkey=CDS;gene=SCD95A.17c;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=NP_628456.1;transl_table=11
NC_003888.3	RefSeq	gene	4700543	4701523	.	-	.	ID=gene4332;Dbxref=GeneID:1099725;Name=SCD95A.18c;gbkey=Gene;gene=SCD95A.18c;gene_biotype=protein_coding;gene_synonym=SCD95A.18c;locus_tag=SCO4285
NC_003888.3	RefSeq	CDS	4700543	4701523	.	-	0	ID=cds4238;Parent=gene4332;Dbxref=Genbank:NP_628457.1,GeneID:1099725;Name=NP_628457.1;Note=SCD95A.18%2C possible sugar kinase%2C len: 326 aa%3B similar to TR:CAB60179 (EMBL:AL132824) Streptomyces coelicolor sugar kinase SCAH10.25%2C 382 aa%3B fasta scores: opt: 449 z-score: 453.3 E(): 8.7e-18%3B 37.2%25 identity in 301 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family and 5x degenerate repeat: (S/A)AP;gbkey=CDS;gene=SCD95A.18c;product=sugar kinase;protein_id=NP_628457.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4700554	4700558	.	-	.	ID=id5362;Dbxref=GeneID:1099725;gbkey=RBS;gene=SCD95A.18c
NC_003888.3	RefSeq	repeat_region	4700600	4700644	.	-	.	ID=id5363;Dbxref=GeneID:1099725;Note=5x degenerate repeat translated in SCD95A.18c;gbkey=repeat_region;gene=SCD95A.18c
NC_003888.3	RefSeq	sequence_feature	4700984	4701496	.	-	.	ID=id5364;Dbxref=GeneID:1099725;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 106.80%2C E-value 1.1e-30;gbkey=misc_feature;gene=SCD95A.18c
NC_003888.3	RefSeq	gene	4701671	4702936	.	+	.	ID=gene4333;Dbxref=GeneID:1099726;Name=SCD95A.19;gbkey=Gene;gene=SCD95A.19;gene_biotype=protein_coding;gene_synonym=SCD95A.19;locus_tag=SCO4286
NC_003888.3	RefSeq	CDS	4701671	4702936	.	+	0	ID=cds4239;Parent=gene4333;Dbxref=Genbank:NP_628458.1,GeneID:1099726;Name=NP_628458.1;Note=SCD95A.19%2C possible solute-binding protein ( hypothetical protein)%2C len: 421 aa%3B similar to TR:P72397 (EMBL:Y07706) Streptomyces coelicolor maltose-binding protein MalE%2C 423 aa%3B fasta scores: opt: 348 z-score: 387.3 E(): 4.1e-14%3B 25.9%25 identity in 433 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature. Contains also possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCD95A.19;product=solute-binding protein;protein_id=NP_628458.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4701710	4701742	.	+	.	ID=id5365;Dbxref=GeneID:1099726;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD95A.19
NC_003888.3	RefSeq	sequence_feature	4702079	4702918	.	+	.	ID=id5366;Dbxref=GeneID:1099726;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 86.20%2C E-value 3.5e-23;gbkey=misc_feature;gene=SCD95A.19
NC_003888.3	RefSeq	sequence_feature	4702100	4702153	.	+	.	ID=id5367;Dbxref=GeneID:1099726;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature;gbkey=misc_feature;gene=SCD95A.19
NC_003888.3	RefSeq	gene	4702952	4703206	.	+	.	ID=gene4334;Dbxref=GeneID:1099727;Name=SCD95A.20;gbkey=Gene;gene=SCD95A.20;gene_biotype=protein_coding;gene_synonym=SCD95A.20;locus_tag=SCO4287
NC_003888.3	RefSeq	CDS	4702952	4703206	.	+	0	ID=cds4240;Parent=gene4334;Dbxref=Genbank:NP_628459.1,GeneID:1099727;Name=NP_628459.1;Note=SCD95A.20%2C hypothetical protein%2C len: 84 aa%3B similar to TR:P96276 (EMBL:Z84724) Mycobacterium tuberculosis hypothetical 11.7 kD protein MTCY22G10.27%2C 102 aa%3B fasta scores: opt: 244 z-score: 340.2 E(): 1.7e-11%3B 54.2%25 identity in 72 aa overlap;gbkey=CDS;gene=SCD95A.20;product=hypothetical protein;protein_id=NP_628459.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4703214	4703322	.	+	.	ID=id5368;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4703379	4703487	.	+	.	ID=id5369;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4703578	4704450	.	+	.	ID=gene4335;Dbxref=GeneID:1099728;Name=SCD95A.21;gbkey=Gene;gene=SCD95A.21;gene_biotype=protein_coding;gene_synonym=SCD95A.21;locus_tag=SCO4288
NC_003888.3	RefSeq	CDS	4703578	4704450	.	+	0	ID=cds4241;Parent=gene4335;Dbxref=Genbank:NP_628460.1,GeneID:1099728;Name=NP_628460.1;Note=SCD95A.21%2C possible phosphatase%2C len: 290 aa%3B similar to TR:O27788 (EMBL:AE000931) Methanobacterium thermoautotrophicum trehalose-6-phosphate phophatase related protein MTH1760%2C 264 aa%3B fasta scores: opt: 197 z-score: 223.2 E(): 5.7e-05%3B 28.3%25 identity in 258 aa overlap;gbkey=CDS;gene=SCD95A.21;product=phosphatase;protein_id=NP_628460.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4704577	4704582	.	+	.	ID=id5370;gbkey=RBS
NC_003888.3	RefSeq	gene	4704590	4705072	.	+	.	ID=gene4336;Dbxref=GeneID:1099729;Name=SCD95A.22;gbkey=Gene;gene=SCD95A.22;gene_biotype=protein_coding;gene_synonym=SCD95A.22;locus_tag=SCO4289
NC_003888.3	RefSeq	CDS	4704590	4705072	.	+	0	ID=cds4242;Parent=gene4336;Dbxref=Genbank:NP_628461.1,GeneID:1099729;Name=NP_628461.1;Note=SCD95A.22%2C possible hypothetical protein%2C len: 160 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD95A.22;product=hypothetical protein;protein_id=NP_628461.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4704626	4704658	.	+	.	ID=id5371;Dbxref=GeneID:1099729;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD95A.22
NC_003888.3	RefSeq	repeat_region	4704824	4704915	.	+	.	ID=id5372;Dbxref=GeneID:1099729;gbkey=repeat_region;gene=SCD95A.22
NC_003888.3	RefSeq	repeat_region	4704962	4705053	.	+	.	ID=id5373;Dbxref=GeneID:1099729;gbkey=repeat_region;gene=SCD95A.22
NC_003888.3	RefSeq	gene	4705079	4706467	.	-	.	ID=gene4337;Dbxref=GeneID:1099730;Name=SCD95A.23c;gbkey=Gene;gene=SCD95A.23c;gene_biotype=protein_coding;gene_synonym=SCD95A.23c;locus_tag=SCO4290
NC_003888.3	RefSeq	CDS	4705079	4706467	.	-	0	ID=cds4243;Parent=gene4337;Dbxref=Genbank:NP_628462.1,GeneID:1099730;Name=NP_628462.1;Note=SCD95A.23c%2C possible trehalose-phosphate synthase%2C len: 462 aa%3B similar to SW:OTSA_ECOLI (EMBL:X69160) Escherichia coli alpha%2Calpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) OtsA%2C 473 aa%3B fasta scores: opt: 511 z-score: 588.8 E(): 2.5e-25%3B 30.6%25 identity in 431 aa overlap. Contains Pfam match to entry PF00982 TrehaloseP_syn%2C Trehalose-6-phosphate synthase domain;gbkey=CDS;gene=SCD95A.23c;product=trehalose-phosphate synthase;protein_id=NP_628462.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4705082	4706446	.	-	.	ID=id5374;Dbxref=GeneID:1099730;Note=Pfam match to entry PF00982 TrehaloseP_syn%2C Trehalose-6-phosphate synthase domain%2C score 383.10%2C E-value 2.9e-111;gbkey=misc_feature;gene=SCD95A.23c
NC_003888.3	RefSeq	ribosome_entry_site	4706471	4706474	.	-	.	ID=id5375;gbkey=RBS
NC_003888.3	RefSeq	gene	4706614	4707315	.	+	.	ID=gene4338;Dbxref=GeneID:1099731;Name=SCD95A.24;gbkey=Gene;gene=SCD95A.24;gene_biotype=protein_coding;gene_synonym=SCD95A.24;locus_tag=SCO4291
NC_003888.3	RefSeq	CDS	4706614	4707315	.	+	0	ID=cds4244;Parent=gene4338;Dbxref=Genbank:NP_628463.1,GeneID:1099731;Name=NP_628463.1;Note=SCD95A.24%2C possible hypothetical protein%2C len: 233 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence. Contains also a conserved repeat: 4x TP;gbkey=CDS;gene=SCD95A.24;product=hypothetical protein;protein_id=NP_628463.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4706671	4706703	.	+	.	ID=id5376;Dbxref=GeneID:1099731;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD95A.24
NC_003888.3	RefSeq	repeat_region	4706821	4706845	.	+	.	ID=id5377;Dbxref=GeneID:1099731;Note=4x conserved repeat translated in SCD95A.24;gbkey=repeat_region;gene=SCD95A.24
NC_003888.3	RefSeq	gene	4707339	4708283	.	-	.	ID=gene4339;Dbxref=GeneID:1099732;Name=SCD95A.25c;gbkey=Gene;gene=SCD95A.25c;gene_biotype=protein_coding;gene_synonym=SCD95A.25c;locus_tag=SCO4292
NC_003888.3	RefSeq	CDS	4707339	4708283	.	-	0	ID=cds4245;Parent=gene4339;Dbxref=Genbank:NP_628464.1,GeneID:1099732;Name=NP_628464.1;Note=SCD95A.25c%2C hypothetical protein%2C len: 314 aa%3B similar to TR:Q49955 (EMBL:U15180) Mycobacterium leprae U1756L%2C 318 aa%3B fasta scores: opt: 792 z-score: 901.0 E(): 0%3B 48.0%25 identity in 304 aa overlap;gbkey=CDS;gene=SCD95A.25c;product=glucosyl-3-phosphoglycerate synthase;protein_id=NP_628464.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4708293	4708297	.	-	.	ID=id5378;gbkey=RBS
NC_003888.3	RefSeq	gene	4708607	4709893	.	+	.	ID=gene4340;Dbxref=GeneID:1099733;Name=SCD95A.26;gbkey=Gene;gene=SCD95A.26;gene_biotype=protein_coding;gene_synonym=SCD95A.26;locus_tag=SCO4293
NC_003888.3	RefSeq	CDS	4708607	4709893	.	+	0	ID=cds4246;Parent=gene4340;Dbxref=Genbank:NP_628465.1,GeneID:1099733;Name=NP_628465.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;gene=SCD95A.26;product=threonine synthase;protein_id=NP_628465.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4708877	4709800	.	+	.	ID=id5379;Dbxref=GeneID:1099733;Note=Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzyme%2C score 203.50%2C E-value 3.1e-57;gbkey=misc_feature;gene=SCD95A.26
NC_003888.3	RefSeq	ribosome_entry_site	4709874	4709879	.	+	.	ID=id5380;Dbxref=GeneID:1099733;gbkey=RBS;gene=SCD95A.26
NC_003888.3	RefSeq	gene	4709890	4710165	.	+	.	ID=gene4341;Dbxref=GeneID:1099734;Name=SCD95A.27;gbkey=Gene;gene=SCD95A.27;gene_biotype=protein_coding;gene_synonym=SCD95A.27;locus_tag=SCO4294
NC_003888.3	RefSeq	CDS	4709890	4710165	.	+	0	ID=cds4247;Parent=gene4341;Dbxref=Genbank:NP_628466.1,GeneID:1099734;Name=NP_628466.1;Note=SCD95A.27%2C hypothetical protein%2C len: 91 aa%3B similar to SW:Y03K_MYCTU (EMBL:Z73902) Mycobacterium tuberculosis hypothetical 9.6 kD protein MTCY130.20%2C 93 aa%3B fasta scores: opt: 369 z-score: 480.3 E(): 2.7e-19%3B 63.4%25 identity in 93 aa overlap%2C to TR:CAB50992 (EMBL:AL096852) Streptomyces coelicolor hypothetical protein SCE19A.11c%2C 92 aa%3B fasta scores: opt: 332 z-score: 416.4 E(): 1.2e-17%3B 54.9%25 identity in 91 aa overlap and highly similar to TR:Q9EUR9 (EMBL:AJ250537) Streptomyces hygroscopicus hypothetical protein%2C 92 aa%3B fasta scores: opt: 496 Z-score: 626.4 E(): 2.9e-27%3B 83.516%25 identity in 91 aa overlap;gbkey=CDS;gene=SCD95A.27;product=hypothetical protein;protein_id=NP_628466.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4710574	4710577	.	+	.	ID=id5381;gbkey=RBS
NC_003888.3	RefSeq	gene	4710584	4710787	.	+	.	ID=gene4342;Dbxref=GeneID:1099735;Name=SCD95A.28;gbkey=Gene;gene=SCD95A.28;gene_biotype=protein_coding;gene_synonym=SCD95A.28,scoF4;locus_tag=SCO4295
NC_003888.3	RefSeq	CDS	4710584	4710787	.	+	0	ID=cds4248;Parent=gene4342;Dbxref=Genbank:NP_628467.1,GeneID:1099735;Name=NP_628467.1;Note=SCD95A.28%2C scoF4%2C cold shock protein%2C len: 67 aa%3B highly similar to TR:AAD49327 (EMBL:AF162937) Streptomyces coelicolor A3(2) cold shock protein F40%2C 67 aa%3B fasta scores: opt: 317 z-score: 454.8 E(): 7.2e-18%3B 70.3%25 identity in 64 aa overlap. Contains Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain and match to Prosite entry PS00352 'Cold-shock' DNA-binding domain signature;gbkey=CDS;gene=SCD95A.28;product=cold shock protein;protein_id=NP_628467.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4710584	4710781	.	+	.	ID=id5382;Dbxref=GeneID:1099735;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 150.00%2C E-value 4.1e-41;gbkey=misc_feature;gene=SCD95A.28
NC_003888.3	RefSeq	sequence_feature	4710626	4710682	.	+	.	ID=id5383;Dbxref=GeneID:1099735;Note=PS00352 'Cold-shock' DNA-binding domain signature;gbkey=misc_feature;gene=SCD95A.28
NC_003888.3	RefSeq	ribosome_entry_site	4711099	4711103	.	+	.	ID=id5384;gbkey=RBS
NC_003888.3	RefSeq	gene	4711115	4712740	.	+	.	ID=gene4343;Dbxref=GeneID:1099736;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;gene_synonym=groEL2,SCD95A.29;locus_tag=SCO4296
NC_003888.3	RefSeq	CDS	4711115	4712740	.	+	0	ID=cds4249;Parent=gene4343;Dbxref=Genbank:NP_628468.1,GeneID:1099736;Name=NP_628468.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=chaperonin GroEL;protein_id=NP_628468.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4711178	4712680	.	+	.	ID=id5385;Dbxref=GeneID:1099736;Note=Pfam match to entry PF00118 cpn60_TCP1%2C TCP-1/cpn60 chaperonin family%2C score 801.50%2C E-value 3.1e-237;gbkey=misc_feature;gene=groEL
NC_003888.3	RefSeq	sequence_feature	4712321	4712356	.	+	.	ID=id5386;Dbxref=GeneID:1099736;Note=PS00296 Chaperonins cpn60 signature;gbkey=misc_feature;gene=groEL
NC_003888.3	RefSeq	ribosome_entry_site	4712979	4712983	.	+	.	ID=id5387;gbkey=RBS
NC_003888.3	RefSeq	gene	4712991	4714121	.	+	.	ID=gene4344;Dbxref=GeneID:1099737;Name=SCD95A.30;gbkey=Gene;gene=SCD95A.30;gene_biotype=protein_coding;gene_synonym=SCD95A.30;locus_tag=SCO4297
NC_003888.3	RefSeq	CDS	4712991	4714121	.	+	0	ID=cds4250;Parent=gene4344;Dbxref=Genbank:NP_628469.1,GeneID:1099737;Name=NP_628469.1;Note=SCD95A.30%2C probable oxidoreduxtase%2C len: 376 aa%3B similar to SW:NADO_THEBR (EMBL:X67220) Thermoanaerobacter brockii NADH oxidase%2C 651 aa%3B fasta scores: opt: 498 z-score: 552.0 E(): 2.8e-23%3B 33.6%25 identity in 354 aa overlap. Contains Pfam match to entry PF00724 oxidored_FMN%2C FMN oxidoreductase;gbkey=CDS;gene=SCD95A.30;product=oxidoreductase;protein_id=NP_628469.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4713033	4714079	.	+	.	ID=id5388;Dbxref=GeneID:1099737;Note=Pfam match to entry PF00724 oxidored_FMN%2C FMN oxidoreductase%2C score 226.70%2C E-value 3.4e-64;gbkey=misc_feature;gene=SCD95A.30
NC_003888.3	RefSeq	ribosome_entry_site	4714150	4714153	.	+	.	ID=id5389;gbkey=RBS
NC_003888.3	RefSeq	gene	4714155	4715696	.	+	.	ID=gene4345;Dbxref=GeneID:1099738;Name=SCD95A.31;gbkey=Gene;gene=SCD95A.31;gene_biotype=protein_coding;gene_synonym=SCD95A.31;locus_tag=SCO4298
NC_003888.3	RefSeq	CDS	4714155	4715696	.	+	0	ID=cds4251;Parent=gene4345;Dbxref=Genbank:NP_628470.1,GeneID:1099738;Name=NP_628470.1;Note=SCD95A.31%2C probable carboxylesterase%2C len: 513 aa%3B similar to TR:Q9Z545 (EMBL:AL035212) Streptomyces coelicolor  carboxylesterase SC9B2.14%2C 502 aa%3B fasta scores: opt: 1093 z-score: 1041.3 E(): 0%3B 44.6%25 identity in 511 aa overlap and to SW:PNBA_BACSU (EMBL:U06089) Bacillus subtilis para-nitrobenzyl esterase (EC 3.1.1.-) PnbA%2C 489 aa%3B fasta scores: opt: 823 z-score: 786.2 E(): 0%3B 38.1%25 identity in 501 aa overlap. Contains Pfam match to entry PF00135 COesterase%2C Carboxylesterases and match to Prosite entry PS00122 Carboxylesterases type-B serine active site;gbkey=CDS;gene=SCD95A.31;product=carboxylesterase;protein_id=NP_628470.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4714188	4715570	.	+	.	ID=id5390;Dbxref=GeneID:1099738;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterases%2C score 325.20%2C E-value 6.2e-94;gbkey=misc_feature;gene=SCD95A.31
NC_003888.3	RefSeq	sequence_feature	4714695	4714742	.	+	.	ID=id5391;Dbxref=GeneID:1099738;Note=PS00122 Carboxylesterases type-B serine active site;gbkey=misc_feature;gene=SCD95A.31
NC_003888.3	RefSeq	gene	4715693	4716040	.	+	.	ID=gene4346;Dbxref=GeneID:1099739;Name=SCD95A.32;gbkey=Gene;gene=SCD95A.32;gene_biotype=protein_coding;gene_synonym=SCD95A.32;locus_tag=SCO4299
NC_003888.3	RefSeq	CDS	4715693	4716040	.	+	0	ID=cds4252;Parent=gene4346;Dbxref=Genbank:NP_628471.1,GeneID:1099739;Name=NP_628471.1;Note=SCD95A.32%2C possible integral membrane protein%2C len: 115 aa. Contains possible hydrophobic membrane spanning regions. High content in glycine amino acid residues;gbkey=CDS;gene=SCD95A.32;product=hypothetical protein;protein_id=NP_628471.1;transl_table=11
NC_003888.3	RefSeq	gene	4716003	4716272	.	-	.	ID=gene4347;Dbxref=GeneID:1099740;Name=SCD95A.33c;gbkey=Gene;gene=SCD95A.33c;gene_biotype=protein_coding;gene_synonym=SCD95A.33c;locus_tag=SCO4300
NC_003888.3	RefSeq	CDS	4716003	4716272	.	-	0	ID=cds4253;Parent=gene4347;Dbxref=Genbank:NP_628472.1,GeneID:1099740;Name=NP_628472.1;Note=SCD95A.33c%2C hypothetical protein%2C len: 89 aa%3B similar to TR:CAB69735 (EMBL:AL137166) Streptomyces coelicolor hypothetical 10.2 kD protein SCC121.17%2C 96 aa%3B fasta scores: opt: 251 z-score: 338.4 E(): 2.2e-11%3B 51.1%25 identity in 94 aa overlap;gbkey=CDS;gene=SCD95A.33c;product=hypothetical protein;protein_id=NP_628472.1;transl_table=11
NC_003888.3	RefSeq	gene	4716256	4717095	.	-	.	ID=gene4348;Dbxref=GeneID:1099741;Name=SCD95A.34c;gbkey=Gene;gene=SCD95A.34c;gene_biotype=protein_coding;gene_synonym=SCD95A.34c;locus_tag=SCO4301
NC_003888.3	RefSeq	CDS	4716256	4717095	.	-	0	ID=cds4254;Parent=gene4348;Dbxref=Genbank:NP_628473.1,GeneID:1099741;Name=NP_628473.1;Note=SCD95A.34c%2C possible DNA-binding protein%2C len: 279 aa%3B similar to various S. coelicolor hypothetical proteins%2C e.g. TR:CAB69734 (EMBL:AL137166) Streptomyces coelicolor hypothetical 30.4 kD protein SCC121.16%2C 277 aa%3B fasta scores: opt: 731 z-score: 897.3 E(): 0%3B 45.2%25 identity in 259 aa overlap and to TR:CAB88448 (EMBL:AL353815) Streptomyces coelicolor DNA-binding protein SCD6.19%2C 295 aa%3B fasta scores: opt: 388 z-score: 478.8 E(): 3.3e-19%3B 34.3%25 identity in 286 aa overlap. Contains TTA leucine codon%2C possible target for bldA regulation and a possible helix-turn-helix motif at residues 30..51 (+3.39 SD);gbkey=CDS;gene=SCD95A.34c;product=DNA-binding protein;protein_id=NP_628473.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4716751	4716753	.	-	.	ID=id5392;Dbxref=GeneID:1099741;Note=TTA Leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD95A.34c
NC_003888.3	RefSeq	ribosome_entry_site	4717106	4717109	.	-	.	ID=id5393;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4717206	4717210	.	+	.	ID=id5394;gbkey=RBS
NC_003888.3	RefSeq	gene	4717214	4717603	.	+	.	ID=gene4349;Dbxref=GeneID:1099742;Name=SCD95A.35;gbkey=Gene;gene=SCD95A.35;gene_biotype=protein_coding;gene_synonym=SCD95A.35;locus_tag=SCO4302
NC_003888.3	RefSeq	CDS	4717214	4717603	.	+	0	ID=cds4255;Parent=gene4349;Dbxref=Genbank:NP_628474.1,GeneID:1099742;Name=NP_628474.1;Note=SCD95A.35%2C possible hypothetical protein%2C len: 129 aa%3B N-terminal domain similar to TR:CAB69733 (EMBL:AL137166) Streptomyces coelicolor hypothetical 7.1 kD protein SCC121.15c%2C 68 aa%3B fasta scores: opt: 202 z-score: 262.4 E(): 3.7e-07%3B 52.5%25 identity in 59 aa overlap and C-terminal domain similar to TR:CAB69732 (EMBL:AL137166) Streptomyces coelicolor hypothetical 7.8 kD protein SCC121.14c%2C 73 aa%3B fasta scores: opt: 198 z-score: 257.2 E(): 7.3e-07%3B 51.6%25 identity in 64 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD95A.35;product=hypothetical protein;protein_id=NP_628474.1;transl_table=11
NC_003888.3	RefSeq	gene	4717614	4718222	.	-	.	ID=gene4350;Dbxref=GeneID:1099743;Name=SCD95A.36c;gbkey=Gene;gene=SCD95A.36c;gene_biotype=protein_coding;gene_synonym=SCD95A.36c;locus_tag=SCO4303
NC_003888.3	RefSeq	CDS	4717614	4718222	.	-	0	ID=cds4256;Parent=gene4350;Dbxref=Genbank:NP_628475.1,GeneID:1099743;Name=NP_628475.1;Note=SCD95A.36c%2C possible transcriptional regulator%2C len: 202 aa%3B similar to SW:YCFQ_ECOLI (EMBL:AE000211) Escherichia coli hypothetical transcriptional regulator in Ndh-Mfd intergenic region YcfQ%2C 210 aa%3B fasta scores: opt: 401 z-score: 492.0 E(): 6.1e-20%3B 37.3%25 identity in 201 aa overlap;gbkey=CDS;gene=SCD95A.36c;product=transcriptional regulator;protein_id=NP_628475.1;transl_table=11
NC_003888.3	RefSeq	gene	4718317	4719066	.	+	.	ID=gene4351;Dbxref=GeneID:1099744;Name=SCD95A.37;gbkey=Gene;gene=SCD95A.37;gene_biotype=protein_coding;gene_synonym=SCD95A.37;locus_tag=SCO4304
NC_003888.3	RefSeq	CDS	4718317	4719066	.	+	0	ID=cds4257;Parent=gene4351;Dbxref=Genbank:NP_628476.1,GeneID:1099744;Name=NP_628476.1;Note=SCD95A.37%2C probable oxidoreductase%2C len: 249 aa%3B similar to TR:CAB71826 (EMBL:AL138662) Streptomyces coelicolor  dehydrogenase/reductase SC8E4A.21c%2C 245 aa%3B fasta scores: opt: 757 z-score: 795.6 E(): 0%3B 50.0%25 identity in 250 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCD95A.37;product=oxidoreductase;protein_id=NP_628476.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4718335	4718877	.	+	.	ID=id5395;Dbxref=GeneID:1099744;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 185.10%2C E-value 1.1e-51;gbkey=misc_feature;gene=SCD95A.37
NC_003888.3	RefSeq	sequence_feature	4718728	4718814	.	+	.	ID=id5396;Dbxref=GeneID:1099744;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCD95A.37
NC_003888.3	RefSeq	sequence_feature	4718950	4719042	.	+	.	ID=id5397;Dbxref=GeneID:1099744;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 45.50%2C E-value 3.1e-11;gbkey=misc_feature;gene=SCD95A.37
NC_003888.3	RefSeq	gene	4719080	4719673	.	-	.	ID=gene4352;Dbxref=GeneID:1099745;Name=SCD95A.38c;gbkey=Gene;gene=SCD95A.38c;gene_biotype=protein_coding;gene_synonym=SCD95A.38c;locus_tag=SCO4305
NC_003888.3	RefSeq	CDS	4719080	4719673	.	-	0	ID=cds4258;Parent=gene4352;Dbxref=Genbank:NP_628477.1,GeneID:1099745;Name=NP_628477.1;Note=SCD95A.38c%2C hypothetical protein%2C len: 197 aa%3B similar to TR:Q9X9V5 (EMBL:AL096743) Streptomyces coelicolor hypothetical 21.2 kD protein SCI7.35c%2C 197 aa%3B fasta scores: opt: 216 z-score: 272.7 E(): 9.9e-08%3B 35.2%25 identity in 199 aa overlap;gbkey=CDS;gene=SCD95A.38c;product=hypothetical protein;protein_id=NP_628477.1;transl_table=11
NC_003888.3	RefSeq	gene	4719675	4720244	.	-	.	ID=gene4353;Dbxref=GeneID:1099746;Name=SCD95A.39c;gbkey=Gene;gene=SCD95A.39c;gene_biotype=protein_coding;gene_synonym=SCD95A.39c;locus_tag=SCO4306
NC_003888.3	RefSeq	CDS	4719675	4720244	.	-	0	ID=cds4259;Parent=gene4353;Dbxref=Genbank:NP_628478.1,GeneID:1099746;Name=NP_628478.1;Note=SCD95A.39c%2C unknown%2C len: 189 aa;gbkey=CDS;gene=SCD95A.39c;product=hypothetical protein;protein_id=NP_628478.1;transl_table=11
NC_003888.3	RefSeq	gene	4720312	4721247	.	-	.	ID=gene4354;Dbxref=GeneID:1099747;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=SCO4307
NC_003888.3	RefSeq	CDS	4720312	4721247	.	-	0	ID=cds4260;Parent=gene4354;Dbxref=Genbank:NP_628479.1,GeneID:1099747;Name=NP_628479.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid-6-phosphate etherase;protein_id=NP_628479.1;transl_table=11
NC_003888.3	RefSeq	gene	4721346	4722308	.	-	.	ID=gene4355;Dbxref=GeneID:1099748;Name=SCD95A.41c;gbkey=Gene;gene=SCD95A.41c;gene_biotype=protein_coding;gene_synonym=SCD95A.41c;locus_tag=SCO4308
NC_003888.3	RefSeq	CDS	4721346	4722308	.	-	0	ID=cds4261;Parent=gene4355;Dbxref=Genbank:NP_628480.1,GeneID:1099748;Name=NP_628480.1;Note=SCD95A.41c%2C possible transcriptional regulator%2C len: 320 aa%3B similar to TR:CAB84834 (EMBL:AL162756) Neisseria meningitidis  transcriptional regulator NMA1605%2C 282 aa%3B fasta scores: opt: 476 z-score: 465.7 E(): 1.8e-18%3B 33.5%25 identity in 281 aa overlap and to SW:HEXR_ECOLI (EMBL:AE000279) Escherichia coli hex regulon repressor HexR%2C 289 aa%3B fasta scores: opt: 337 z-score: 333.6 E(): 4.1e-11%3B 26.6%25 identity in 274 aa overlap. Contains Pfam matches to entries PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family and PF01380 SIS%2C SIS domain;gbkey=CDS;gene=SCD95A.41c;product=transcriptional regulator;protein_id=NP_628480.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4721448	4721858	.	-	.	ID=id5398;Dbxref=GeneID:1099748;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 82.70%2C E-value 7.7e-21;gbkey=misc_feature;gene=SCD95A.41c
NC_003888.3	RefSeq	sequence_feature	4721904	4722233	.	-	.	ID=id5399;Dbxref=GeneID:1099748;Note=Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family%2C score 64.40%2C E-value 2.4e-15;gbkey=misc_feature;gene=SCD95A.41c
NC_003888.3	RefSeq	repeat_region	4722228	4722263	.	-	.	ID=id5400;Dbxref=GeneID:1099748;Note=4x degenerate repeat: P(P/A)A;gbkey=repeat_region;gene=SCD95A.41c
NC_003888.3	RefSeq	gene	4722391	4722771	.	+	.	ID=gene4356;Dbxref=GeneID:1099749;Name=SCD95A.42;gbkey=Gene;gene=SCD95A.42;gene_biotype=protein_coding;gene_synonym=SCD95A.42;locus_tag=SCO4309
NC_003888.3	RefSeq	CDS	4722391	4722771	.	+	0	ID=cds4262;Parent=gene4356;Dbxref=Genbank:NP_628481.1,GeneID:1099749;Name=NP_628481.1;Note=SCD95A.42%2C unknown%2C len: 126 aa;gbkey=CDS;gene=SCD95A.42;product=hypothetical protein;protein_id=NP_628481.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4722770	4722774	.	+	.	ID=id5401;gbkey=RBS
NC_003888.3	RefSeq	gene	4722782	4723078	.	+	.	ID=gene4357;Dbxref=GeneID:1099750;Name=SCD95A.43;gbkey=Gene;gene=SCD95A.43;gene_biotype=protein_coding;gene_synonym=SCD95A.43;locus_tag=SCO4310
NC_003888.3	RefSeq	CDS	4722782	4723078	.	+	0	ID=cds4263;Parent=gene4357;Dbxref=Genbank:NP_628482.1,GeneID:1099750;Name=NP_628482.1;Note=SCD95A.43%2C hypothetical protein%2C len: 98 aa%3B highly similar to TR:P96070 (EMBL:U09991) Streptomyces violaceus ISP5230 chloramphenicol resistance protein (CMLV) and chloramphenicol phosphotransferase genes%2C complete CDS (fragment)%2C 89 aa%3B fasta scores: opt: 450 z-score: 589.5 E(): 2.3e-25%3B 74.1%25 identity in 85 aa overlap;gbkey=CDS;gene=SCD95A.43;product=hypothetical protein;protein_id=NP_628482.1;transl_table=11
NC_003888.3	RefSeq	gene	4723060	4724157	.	-	.	ID=gene4358;Dbxref=GeneID:1099751;Name=SCD95A.44c;gbkey=Gene;gene=SCD95A.44c;gene_biotype=protein_coding;gene_synonym=SCD95A.44c;locus_tag=SCO4311
NC_003888.3	RefSeq	CDS	4723060	4724157	.	-	0	ID=cds4264;Parent=gene4358;Dbxref=Genbank:NP_628483.1,GeneID:1099751;Name=NP_628483.1;Note=SCD95A.44c%2C hypothetical protein%2C len: 365 aa%3B similar to TR:O31648 (EMBL:Z99110) Bacillus subtilis YjdG protein%2C 168 aa%3B fasta scores: opt: 214 z-score: 251.8 E(): 1.5e-06%3B 30.5%25 identity in 154 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCD95A.44c;product=hypothetical protein;protein_id=NP_628483.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4723138	4723572	.	-	.	ID=id5402;Dbxref=GeneID:1099751;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 19.00%2C E-value 0.016;gbkey=misc_feature;gene=SCD95A.44c
NC_003888.3	RefSeq	gene	4724168	4724956	.	-	.	ID=gene4359;Dbxref=GeneID:1099752;Name=SCD95A.45c;gbkey=Gene;gene=SCD95A.45c;gene_biotype=protein_coding;gene_synonym=SCD95A.45c;locus_tag=SCO4312
NC_003888.3	RefSeq	CDS	4724168	4724956	.	-	0	ID=cds4265;Parent=gene4359;Dbxref=Genbank:NP_628484.1,GeneID:1099752;Name=NP_628484.1;Note=SCD95A.45c%2C hypothetical protein%2C len: 262 aa%3B similar to TR:Q9I3L7 (EMBL:AE004578) Pseudomonas aeruginosa hypothetical protein PA1495%2C 208 aa%3B fasta scores: opt: 479 Z-score: 529.6 E(): 7.2e-22%3B 44.330%25 identity in 194 aa overlap. High content in alanine amino acid residues. Contains also a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCD95A.45c;product=hypothetical protein;protein_id=NP_628484.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4724891	4724893	.	-	.	ID=id5403;Dbxref=GeneID:1099752;Note=TTA Leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD95A.45c
NC_003888.3	RefSeq	gene	4724955	4725605	.	+	.	ID=gene4360;Dbxref=GeneID:1099753;Name=SCD95A.46;gbkey=Gene;gene=SCD95A.46;gene_biotype=protein_coding;gene_synonym=SCD95A.46;locus_tag=SCO4313
NC_003888.3	RefSeq	CDS	4724955	4725605	.	+	0	ID=cds4266;Parent=gene4360;Dbxref=Genbank:NP_628485.1,GeneID:1099753;Name=NP_628485.1;Note=SCD95A.46%2C possible regulatory protein%2C len: 216 aa%3B similar to TR:CAB56658 (EMBL:AL121596) Streptomyces coelicolor tetR family transcriptional regulator SCF51A.06%2C 177 aa%3B fasta scores: opt: 164 z-score: 202.9 E(): 0.00077%3B 32.0%25 identity in 103 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 37..58 (+5.35 SD);gbkey=CDS;gene=SCD95A.46;product=regulatory protein;protein_id=NP_628485.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4725015	4725155	.	+	.	ID=id5404;Dbxref=GeneID:1099753;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 19.50%2C E-value 0.0012;gbkey=misc_feature;gene=SCD95A.46
NC_003888.3	RefSeq	ribosome_entry_site	4725609	4725612	.	+	.	ID=id5405;gbkey=RBS
NC_003888.3	RefSeq	gene	4725616	4726299	.	+	.	ID=gene4361;Dbxref=GeneID:1099754;Name=SCD95A.47;gbkey=Gene;gene=SCD95A.47;gene_biotype=protein_coding;gene_synonym=SCD95A.47;locus_tag=SCO4314
NC_003888.3	RefSeq	CDS	4725616	4726299	.	+	0	ID=cds4267;Parent=gene4361;Dbxref=Genbank:NP_628486.1,GeneID:1099754;Name=NP_628486.1;Note=SCD95A.47%2C hypothetical protein%2C len: 227 aa%3B similar to TR:O53480 (EMBL:AL021899) Mycobacterium tuberculosis hypothetical 23.2 kD protein MTV018.23%2C 213 aa%3B fasta scores: opt: 178 z-score: 217.9 E(): 0.00011%3B 29.0%25 identity in 200 aa overlap;gbkey=CDS;gene=SCD95A.47;product=hypothetical protein;protein_id=NP_628486.1;transl_table=11
NC_003888.3	RefSeq	gene	4726384	4727073	.	+	.	ID=gene4362;Dbxref=GeneID:1099755;Name=SCD95A.48;gbkey=Gene;gene=SCD95A.48;gene_biotype=protein_coding;gene_synonym=SCD95A.48;locus_tag=SCO4315
NC_003888.3	RefSeq	CDS	4726384	4727073	.	+	0	ID=cds4268;Parent=gene4362;Dbxref=Genbank:NP_628487.1,GeneID:1099755;Name=NP_628487.1;Note=SCD95A.48%2C possible homeostasis protein%2C len: 229 aa%3B similar to SW:CUTC_ECOLI (EMBL:L38618) Escherichia coli copper homeostasis protein CutC%2C 248 aa%3B fasta scores: opt: 302 z-score: 336.1 E(): 2.9e-11%3B 31.3%25 identity in 208 aa overlap;gbkey=CDS;gene=SCD95A.48;product=homeostasis protein;protein_id=NP_628487.1;transl_table=11
NC_003888.3	RefSeq	gene	4727234	4729279	.	-	.	ID=gene4363;Dbxref=GeneID:1099756;Name=SCD95A.49c;gbkey=Gene;gene=SCD95A.49c;gene_biotype=protein_coding;gene_synonym=SCD95A.49c;locus_tag=SCO4316
NC_003888.3	RefSeq	CDS	4727234	4729279	.	-	0	ID=cds4269;Parent=gene4363;Dbxref=Genbank:NP_628488.1,GeneID:1099756;Name=NP_628488.1;Note=SCD95A.49c%2C possible ATP/GTP binding protein%2C len: 681 aa%3B similar to TR:CAB72415 (EMBL:AL138978) Streptomyces coelicolor hypothetical 82.6 kD protein SC6A11.15%2C 755 aa%3B fasta scores: opt: 683 z-score: 757.1 E(): 0%3B 33.5%25 identity in 767 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD95A.49c;product=ATP/GTP binding protein;protein_id=NP_628488.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4728650	4728673	.	-	.	ID=id5406;Dbxref=GeneID:1099756;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD95A.49c
NC_003888.3	RefSeq	ribosome_entry_site	4729287	4729291	.	-	.	ID=id5407;gbkey=RBS
NC_003888.3	RefSeq	gene	4729548	4729769	.	+	.	ID=gene4364;Dbxref=GeneID:1099757;Name=SCD95A.50;gbkey=Gene;gene=SCD95A.50;gene_biotype=protein_coding;gene_synonym=SCD95A.50;locus_tag=SCO4317
NC_003888.3	RefSeq	CDS	4729548	4729769	.	+	0	ID=cds4270;Parent=gene4364;Dbxref=Genbank:NP_628489.1,GeneID:1099757;Name=NP_628489.1;Note=SCD95A.50%2C unknown%2C len: 73 aa;gbkey=CDS;gene=SCD95A.50;product=hypothetical protein;protein_id=NP_628489.1;transl_table=11
NC_003888.3	RefSeq	gene	4729773	4731411	.	-	.	ID=gene4365;Dbxref=GeneID:1099758;Name=SCD95A.51c;gbkey=Gene;gene=SCD95A.51c;gene_biotype=pseudogene;gene_synonym=SCD95A.51c;locus_tag=SCO4318;pseudo=true
NC_003888.3	RefSeq	sequence_feature	4729773	4731411	.	-	.	ID=id5408;Dbxref=GeneID:1099758;Note=SCD95A.51c%2C probable helicase (fragment)%2C len: >135 aa%3B highly similar to TR:O53873 (EMBL:AL022004) Mycobacterium tuberculosis DNA helicase MTV043.54c%2C 542 aa%3B fasta scores: opt: 673 z-score: 813.3 E(): 0%3B 76.1%25 identity in 134 aa overlap. Contains Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain~SCD12A.01c%2C DNA helicase%2C pseudogene%2C len: >1328 bp%3B similar to TR:O53873 (EMBL:AL022004) Mycobacterium tuberculosis DNA helicase MTV043.54c%2C 542 aa%3B fasta scores: opt: 716 z-score: 905.2 E(): 0%3B 76.4%25 identity in 140 aa overlap%3BDNA helicase;gbkey=misc_feature;gene=SCD95A.51c
NC_003888.3	RefSeq	sequence_feature	4729914	4730147	.	-	.	ID=id5409;Dbxref=GeneID:1099758;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 46.30%2C E-value 6.6e-10;gbkey=misc_feature;gene=SCD95A.51c
NC_003888.3	RefSeq	sequence_feature	4730313	4730897	.	-	.	ID=id5410;Dbxref=GeneID:1099758;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 22.40%2C E-value 3.6e-06;gbkey=misc_feature;gene=SCD95A.51c
NC_003888.3	RefSeq	gene	4731490	4731672	.	-	.	ID=gene4366;Dbxref=GeneID:1099759;Name=SCD12A.02c;gbkey=Gene;gene=SCD12A.02c;gene_biotype=protein_coding;gene_synonym=SCD12A.02c;locus_tag=SCO4319
NC_003888.3	RefSeq	CDS	4731490	4731672	.	-	0	ID=cds4271;Parent=gene4366;Dbxref=Genbank:NP_628490.1,GeneID:1099759;Name=NP_628490.1;Note=SCD12A.02c%2C possible integral membrane protein%2C len: 60 aa. Contains possible hydrophobic membrane spanning regions. High content in proline amino acid residues;gbkey=CDS;gene=SCD12A.02c;product=hypothetical protein;protein_id=NP_628490.1;transl_table=11
NC_003888.3	RefSeq	gene	4731774	4731893	.	-	.	ID=gene4367;Dbxref=GeneID:1099760;Name=SCD12A.03c;gbkey=Gene;gene=SCD12A.03c;gene_biotype=protein_coding;gene_synonym=SCD12A.03c;locus_tag=SCO4320
NC_003888.3	RefSeq	CDS	4731774	4731893	.	-	0	ID=cds4272;Parent=gene4367;Dbxref=Genbank:NP_628491.1,GeneID:1099760;Name=NP_628491.1;Note=SCD12A.03c%2C membrane protein%2C len: 39 aa%3B doubtful CDS%2C TBparse predicted. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD12A.03c;product=hypothetical protein;protein_id=NP_628491.1;transl_table=11
NC_003888.3	RefSeq	gene	4732070	4734673	.	-	.	ID=gene4368;Dbxref=GeneID:1099761;Name=SCD12A.04c;gbkey=Gene;gene=SCD12A.04c;gene_biotype=protein_coding;gene_synonym=SCD12A.04c;locus_tag=SCO4321
NC_003888.3	RefSeq	CDS	4732070	4734673	.	-	0	ID=cds4273;Parent=gene4368;Dbxref=Genbank:NP_628492.1,GeneID:1099761;Name=NP_628492.1;Note=SCD12A.04c%2C hypothetical protein%2C len: 867 aa%3B similar to TR:O53874 (EMBL:AL022004) Mycobacterium tuberculosis hypothetical 79.7 kD protein (fragment) MTV043.55c aa%3B fasta scores: opt: 651 z-score: 618.2 E(): 5.7e-27%3B 36.1%25 identity in 886 aa overlap;gbkey=CDS;gene=SCD12A.04c;product=hypothetical protein;protein_id=NP_628492.1;transl_table=11
NC_003888.3	RefSeq	gene	4734723	4735823	.	+	.	ID=gene4369;Dbxref=GeneID:1099762;Name=SCD12A.05;gbkey=Gene;gene=SCD12A.05;gene_biotype=protein_coding;gene_synonym=SCD12A.05;locus_tag=SCO4322
NC_003888.3	RefSeq	CDS	4734723	4735823	.	+	0	ID=cds4274;Parent=gene4369;Dbxref=Genbank:NP_628493.1,GeneID:1099762;Name=NP_628493.1;Note=SCD12A.05%2C possible integral membrane protein%2C len: 366 aa. Contains possible hydrophobic membrane spanning regions at C-terminal domain. High content in alanine%2C arginine and glycine amino acid residues;gbkey=CDS;gene=SCD12A.05;product=hypothetical protein;protein_id=NP_628493.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4735915	4736269	.	+	.	ID=id5411;Note=6x degenerate repeat: CCGG(T/A)CCG(C/G)GG(A/C)(G/C);gbkey=repeat_region
NC_003888.3	RefSeq	gene	4736376	4737038	.	+	.	ID=gene4370;Dbxref=GeneID:1099763;Name=SCD12A.06;gbkey=Gene;gene=SCD12A.06;gene_biotype=protein_coding;gene_synonym=SCD12A.06;locus_tag=SCO4323
NC_003888.3	RefSeq	CDS	4736376	4737038	.	+	0	ID=cds4275;Parent=gene4370;Dbxref=Genbank:NP_628494.1,GeneID:1099763;Name=NP_628494.1;Note=SCD12A.06%2C possible hydrolase%2C len: 220 aa%3B similar to TR:O86530 (EMBL:AL031124) Streptomyces coelicolor hydrolase SC1C2.30%2C 244 aa%3B fasta scores: opt: 128 z-score: 155.4 E(): 0.34%3B 32.9%25 identity in 167 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=SCD12A.06;product=hydrolase;protein_id=NP_628494.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4736397	4736903	.	+	.	ID=id5412;Dbxref=GeneID:1099763;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 28.00%2C E-value 3.5e-05;gbkey=misc_feature;gene=SCD12A.06
NC_003888.3	RefSeq	gene	4736987	4737265	.	-	.	ID=gene4371;Dbxref=GeneID:1099764;Name=SCD12A.07c;gbkey=Gene;gene=SCD12A.07c;gene_biotype=protein_coding;gene_synonym=SCD12A.07c;locus_tag=SCO4324
NC_003888.3	RefSeq	CDS	4736987	4737265	.	-	0	ID=cds4276;Parent=gene4371;Dbxref=Genbank:NP_628495.1,GeneID:1099764;Name=NP_628495.1;Note=SCD12A.07c%2C possible integral membrane protein%2C len: 92 aa. Contains possible hydrophobic membrane spanning regions. High content in alanine amino acid residues;gbkey=CDS;gene=SCD12A.07c;product=hypothetical protein;protein_id=NP_628495.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4737431	4737434	.	+	.	ID=id5413;gbkey=RBS
NC_003888.3	RefSeq	gene	4737441	4737824	.	+	.	ID=gene4372;Dbxref=GeneID:1099765;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;gene_synonym=cspB,SCD12A.08;locus_tag=SCO4325
NC_003888.3	RefSeq	CDS	4737441	4737824	.	+	0	ID=cds4277;Parent=gene4372;Dbxref=Genbank:NP_628496.1,GeneID:1099765;Name=NP_628496.1;Note=SCD12A.08%2C cspB%2C cold shock protein B%2C len: 127 aa%3B highly similar to TR:O53883 (EMBL:AL022004) Mycobacterium tuberculosis cold shock protein B%2C CspB%2C 135 aa%3B fasta scores: opt: 471 z-score: 565.4 E(): 5e-24%3B 51.5%25 identity in 134 aa overlap and to SW:CSPC_BACCE (EMBL:X93041) Bacillus cereus cold shock-like protein CspC%2C 65 aa%3B fasta scores: opt: 245 z-score: 306.7 E(): 1.3e-09%3B 57.1%25 identity in 63 aa overlap%2C although double in length. Contains Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain;gbkey=CDS;gene=cspB;product=cold shock protein B;protein_id=NP_628496.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4737441	4737635	.	+	.	ID=id5414;Dbxref=GeneID:1099765;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 100.10%2C E-value 8.8e-27;gbkey=misc_feature;gene=cspB
NC_003888.3	RefSeq	gene	4737844	4738692	.	-	.	ID=gene4373;Dbxref=GeneID:1099766;Name=SCD12A.09c;gbkey=Gene;gene=SCD12A.09c;gene_biotype=protein_coding;gene_synonym=SCD12A.09c;locus_tag=SCO4326
NC_003888.3	RefSeq	CDS	4737844	4738692	.	-	0	ID=cds4278;Parent=gene4373;Dbxref=Genbank:NP_628497.1,GeneID:1099766;Name=NP_628497.1;Note=SCD12A.09c%2C conserved hypothetical protein%2C len: 282 aa%3B similar to TR:AAF10587 (EMBL:AE001953) Deinococcus radiodurans conserved hypothetical protein DR1011%2C 301 aa%3B fasta scores: opt: 762 z-score: 923.2 E(): 0%3B 47.6%25 identity in 275 aa overlap;gbkey=CDS;gene=SCD12A.09c;product=1%2C4-dihydroxy-6-naphtoate synthase;protein_id=NP_628497.1;transl_table=11
NC_003888.3	RefSeq	gene	4738682	4739311	.	-	.	ID=gene4374;Dbxref=GeneID:1099767;Name=SCD12A.10c;gbkey=Gene;gene=SCD12A.10c;gene_biotype=protein_coding;gene_synonym=SCD12A.10c;locus_tag=SCO4327
NC_003888.3	RefSeq	CDS	4738682	4739311	.	-	0	ID=cds4279;Parent=gene4374;Dbxref=Genbank:NP_628498.1,GeneID:1099767;Name=NP_628498.1;Note=SCD12A.10c%2C hypothetical protein%2C len: 209 aa%3B similar to TR:AAF11232 (EMBL:AE002009) Deinococcus radiodurans hypothetical 19.1 kD protein DR1664%2C 193 aa%3B fasta scores: opt: 444 z-score: 477.4 E(): 4e-19%3B 47.8%25 identity in 182 aa overlap;gbkey=CDS;gene=SCD12A.10c;product=hypothetical protein;protein_id=NP_628498.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4739312	4739315	.	-	.	ID=id5415;gbkey=RBS
NC_003888.3	RefSeq	gene	4739405	4739869	.	-	.	ID=gene4375;Dbxref=GeneID:1099768;Name=SCD12A.11c;gbkey=Gene;gene=SCD12A.11c;gene_biotype=protein_coding;gene_synonym=SCD12A.11c;locus_tag=SCO4328
NC_003888.3	RefSeq	CDS	4739405	4739869	.	-	0	ID=cds4280;Parent=gene4375;Dbxref=Genbank:NP_628499.1,GeneID:1099768;Name=NP_628499.1;Note=SCD12A.11c%2C possible lipoprotein%2C len: 154 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD12A.11c;product=lipoprotein;protein_id=NP_628499.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4739801	4739833	.	-	.	ID=id5416;Dbxref=GeneID:1099768;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD12A.11c
NC_003888.3	RefSeq	gene	4739973	4741364	.	-	.	ID=gene4376;Dbxref=GeneID:1099769;Name=SCD12A.12c;gbkey=Gene;gene=SCD12A.12c;gene_biotype=protein_coding;gene_synonym=SCD12A.12c;locus_tag=SCO4329
NC_003888.3	RefSeq	CDS	4739973	4741364	.	-	0	ID=cds4281;Parent=gene4376;Dbxref=Genbank:NP_628500.1,GeneID:1099769;Name=NP_628500.1;Note=SCD12A.12c%2C possible integral membrane protein%2C len: 463 aa%3B similar to TR:Q9X8T4 (EMBL:AL049826) Streptomyces coelicolor  membrane protein SCH24.20c%2C 425 aa%3B fasta scores: opt: 305 z-score: 344.1 E(): 1.1e-11%3B 28.7%25 identity in 411 aa overlap. Contains possible hidrophobic membrane spanning regions;gbkey=CDS;gene=SCD12A.12c;product=hypothetical protein;protein_id=NP_628500.1;transl_table=11
NC_003888.3	RefSeq	gene	4741698	4742624	.	+	.	ID=gene4377;Dbxref=GeneID:1099770;Name=SCD12A.13;gbkey=Gene;gene=SCD12A.13;gene_biotype=protein_coding;gene_synonym=SCD12A.13;locus_tag=SCO4330
NC_003888.3	RefSeq	CDS	4741698	4742624	.	+	0	ID=cds4282;Parent=gene4377;Dbxref=Genbank:NP_628501.1,GeneID:1099770;Name=NP_628501.1;Note=SCD12A.13%2C hypothetical protein%2C len: 308 aa%3B similar to TR:O33058 (EMBL:Z99494) Mycobacterium leprae hypothetical 28.2 kD protein MLCB57.28%2C 269 aa%3B fasta scores: opt: 432 z-score: 470.7 E(): 9.4e-19%3B 43.3%25 identity in 270 aa overlap;gbkey=CDS;gene=SCD12A.13;product=hypothetical protein;protein_id=NP_628501.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4742766	4742770	.	+	.	ID=id5417;gbkey=RBS
NC_003888.3	RefSeq	gene	4742777	4745905	.	+	.	ID=gene4378;Dbxref=GeneID:1099771;Name=SCD12A.14;gbkey=Gene;gene=SCD12A.14;gene_biotype=protein_coding;gene_synonym=SCD12A.14;locus_tag=SCO4331
NC_003888.3	RefSeq	CDS	4742777	4745905	.	+	0	ID=cds4283;Parent=gene4378;Dbxref=Genbank:NP_628502.1,GeneID:1099771;Name=NP_628502.1;Note=SCD12A.14%2C hypothetical protein%2C len: 1042 aa%3B similar to TR:CAB61192 (EMBL:AL132973) Streptomyces coelicolor hypothetical 93.0 kD protein SCF91.35%2C 884 aa%3B fasta scores: opt: 160 z-score: 164.2 E(): 0.11%3B 26.0%25 identity in 666 aa overlap;gbkey=CDS;gene=SCD12A.14;product=hypothetical protein;protein_id=NP_628502.1;transl_table=11
NC_003888.3	RefSeq	gene	4746028	4748436	.	-	.	ID=gene4379;Dbxref=GeneID:1099772;Name=SCD12A.15c;gbkey=Gene;gene=SCD12A.15c;gene_biotype=protein_coding;gene_synonym=SCD12A.15c;locus_tag=SCO4332
NC_003888.3	RefSeq	CDS	4746028	4748436	.	-	0	ID=cds4284;Parent=gene4379;Dbxref=Genbank:NP_628503.1,GeneID:1099772;Name=NP_628503.1;Note=SCD12A.15c%2C possible integral membrane ATPase%2C len: 802 aa%3B similar to TR:Q9Z4W5 (EMBL:AL035654) Streptomyces coelicolor  integral membrane ATPase SCE8.09%2C 796 aa%3B fasta scores: opt: 3320 z-score: 3591.6 E(): 0%3B 67.0%25 identity in 796 aa overlap and to TR:O93862 (EMBL:AF043332) Aspergillus nidulans plasma membrane H(+)ATPase PmaA%2C 990 aa%3B fasta scores: opt: 504 z-score: 543.3 E(): 8.4e-23%3B 25.4%25 identity in 808 aa overlap. Contains 2x Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase and match to Prosite entry PS00154 E1-E2 ATPases phosphorylation site. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD12A.15c;product=integral membrane ATPase;protein_id=NP_628503.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4746601	4747620	.	-	.	ID=id5418;Dbxref=GeneID:1099772;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 187.30%2C E-value 2.5e-52;gbkey=misc_feature;gene=SCD12A.15c
NC_003888.3	RefSeq	sequence_feature	4747468	4747488	.	-	.	ID=id5419;Dbxref=GeneID:1099772;Note=PS00154 E1-E2 ATPases phosphorylation site;gbkey=misc_feature;gene=SCD12A.15c
NC_003888.3	RefSeq	sequence_feature	4747825	4748187	.	-	.	ID=id5420;Dbxref=GeneID:1099772;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 64.80%2C E-value 2.5e-17;gbkey=misc_feature;gene=SCD12A.15c
NC_003888.3	RefSeq	gene	4748536	4748796	.	-	.	ID=gene4380;Dbxref=GeneID:1099773;Name=SCD12A.16c;gbkey=Gene;gene=SCD12A.16c;gene_biotype=protein_coding;gene_synonym=SCD12A.16c;locus_tag=SCO4333
NC_003888.3	RefSeq	CDS	4748536	4748796	.	-	0	ID=cds4285;Parent=gene4380;Dbxref=Genbank:NP_628504.1,GeneID:1099773;Name=NP_628504.1;Note=SCD12A.16c%2C possible integral membrane protein%2C len: 86 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD12A.16c;product=hypothetical protein;protein_id=NP_628504.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4748989	4748992	.	+	.	ID=id5421;gbkey=RBS
NC_003888.3	RefSeq	gene	4749000	4750457	.	+	.	ID=gene4381;Dbxref=GeneID:1099774;Name=SCD12A.17;gbkey=Gene;gene=SCD12A.17;gene_biotype=protein_coding;gene_synonym=SCD12A.17;locus_tag=SCO4334
NC_003888.3	RefSeq	CDS	4749000	4750457	.	+	0	ID=cds4286;Parent=gene4381;Dbxref=Genbank:NP_628505.1,GeneID:1099774;Name=NP_628505.1;Note=SCD12A.17%2C possible integral membrane protein%2C len: 485 aa%3B similar to TR:Q9ZBN6 (EMBL:AL034492) Streptomyces coelciolor hypothetical 50.0 kD protein SC6C5.09%2C 485 aa%3B fasta scores: opt: 1532 z-score: 1657.3 E(): 0%3B 51.1%25 identity in 456 aa overlap. Contains Pfam match to entry PF00860 xan_ur_permease%2C Xanthine/uracil permeases family and match to Prosite entry PS00012 Phosphopantetheine attachment site. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD12A.17;product=hypothetical protein;protein_id=NP_628505.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4749117	4750331	.	+	.	ID=id5422;Dbxref=GeneID:1099774;Note=Pfam match to entry PF00860 xan_ur_permease%2C Xanthine/uracil permeases family%2C score 3.00%2C E-value 2.8e-06;gbkey=misc_feature;gene=SCD12A.17
NC_003888.3	RefSeq	sequence_feature	4749321	4749368	.	+	.	ID=id5423;Dbxref=GeneID:1099774;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SCD12A.17
NC_003888.3	RefSeq	gene	4750489	4750677	.	-	.	ID=gene4382;Dbxref=GeneID:1099775;Name=SCD12A.18c;gbkey=Gene;gene=SCD12A.18c;gene_biotype=protein_coding;gene_synonym=SCD12A.18c;locus_tag=SCO4335
NC_003888.3	RefSeq	CDS	4750489	4750677	.	-	0	ID=cds4287;Parent=gene4382;Dbxref=Genbank:NP_628506.1,GeneID:1099775;Name=NP_628506.1;Note=SCD12A.18c%2C unknown%2C len: 62 aa;gbkey=CDS;gene=SCD12A.18c;product=hypothetical protein;protein_id=NP_628506.1;transl_table=11
NC_003888.3	RefSeq	gene	4750828	4751265	.	+	.	ID=gene4383;Dbxref=GeneID:1099776;Name=SCD12A.19;gbkey=Gene;gene=SCD12A.19;gene_biotype=protein_coding;gene_synonym=SCD12A.19;locus_tag=SCO4336
NC_003888.3	RefSeq	CDS	4750828	4751265	.	+	0	ID=cds4288;Parent=gene4383;Dbxref=Genbank:NP_628507.1,GeneID:1099776;Name=NP_628507.1;Note=SCD12A.19%2C possible marR-family protein%2C len: 145 aa%3B similar to TR:CAB56677 (EMBL:AL121596) Streptomyces coelicolor marR-family protein SCF51A.25%2C 148 aa%3B fasta scores: opt: 227 z-score: 290.1 E(): 1.1e-08%3B 38.6%25 identity in 132 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SCD12A.19;product=marR-family protein;protein_id=NP_628507.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4750933	4751244	.	+	.	ID=id5424;Dbxref=GeneID:1099776;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 79.60%2C E-value 6.7e-20;gbkey=misc_feature;gene=SCD12A.19
NC_003888.3	RefSeq	gene	4751293	4752672	.	+	.	ID=gene4384;Dbxref=GeneID:1099777;Name=SCD12A.20;gbkey=Gene;gene=SCD12A.20;gene_biotype=protein_coding;gene_synonym=SCD12A.20;locus_tag=SCO4337
NC_003888.3	RefSeq	CDS	4751293	4752672	.	+	0	ID=cds4289;Parent=gene4384;Dbxref=Genbank:NP_628508.1,GeneID:1099777;Name=NP_628508.1;Note=SCD12A.20%2C possible integral membrane efflux protein%2C len: 459 aa%3B similar to TR:Q9X863 (EMBL:AL049661) Streptomyces coelicolor integral membrane efflux protein SCE134.08%2C 500 aa%3B fasta scores: opt: 2083 z-score: 2154.5 E(): 0%3B 71.1%25 identity in 450 aa overlap and to TR:Q50396 (EMBL:U46844) Mycobacterium smegmatis ethambutanol resistance region EmbC%2C 412 aa%3B fasta scores: opt: 844 z-score: 878.0 E(): 0%3B 38.8%25 identity in 399 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD12A.20;product=integral membrane efflux protein;protein_id=NP_628508.1;transl_table=11
NC_003888.3	RefSeq	gene	4752722	4753294	.	+	.	ID=gene4385;Dbxref=GeneID:1099778;Name=SCD12A.21;gbkey=Gene;gene=SCD12A.21;gene_biotype=protein_coding;gene_synonym=SCD12A.21;locus_tag=SCO4338
NC_003888.3	RefSeq	CDS	4752722	4753294	.	+	0	ID=cds4290;Parent=gene4385;Dbxref=Genbank:NP_628509.1,GeneID:1099778;Name=NP_628509.1;Note=SCD12A.21%2C hypothetical protein%2C len: 190 aa%3B similar to TR:Q45633 (EMBL:L13418) Bacillus stearothermophilus maltose permease MalA%2C 314 aa%3B fasta scores: opt: 207 z-score: 246.2 E(): 3e-06%3B 31.3%25 identity in 160 aa overlap. Contains match to Prosite entry PS00216 Sugar transport proteins signature 1;gbkey=CDS;gene=SCD12A.21;product=2'-5' RNA ligase;protein_id=NP_628509.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4753028	4753078	.	+	.	ID=id5425;Dbxref=GeneID:1099778;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCD12A.21
NC_003888.3	RefSeq	gene	4753436	4754290	.	-	.	ID=gene4386;Dbxref=GeneID:1099779;Name=SCD12A.22c;gbkey=Gene;gene=SCD12A.22c;gene_biotype=protein_coding;gene_synonym=SCD12A.22c;locus_tag=SCO4339
NC_003888.3	RefSeq	CDS	4753436	4754290	.	-	0	ID=cds4291;Parent=gene4386;Dbxref=Genbank:NP_628510.1,GeneID:1099779;Name=NP_628510.1;Note=SCD12A.22c%2C possible reductase%2C len: 284 aa%3B similar to SW:STCV_EMENI (EMBL:U34740) Aspergillus nidulans sterigmatocystin biosynthesis dehydrogenase StcV%2C 387 aa%3B fasta scores: opt: 401 z-score: 462.6 E(): 2.6e-18%3B 32.0%25 identity in 284 aa overlap and to TR:O33936 (EMBL:U77454) Saccharopolyspora erythraea EryBII%2C 333 aa%3B fasta scores: opt: 970 z-score: 1111.9 E(): 0%3B 53.7%25 identity in 287 aa overlap;gbkey=CDS;gene=SCD12A.22c;product=reductase;protein_id=NP_628510.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4754352	4754355	.	+	.	ID=id5426;gbkey=RBS
NC_003888.3	RefSeq	gene	4754366	4756015	.	+	.	ID=gene4387;Dbxref=GeneID:1099780;Name=SCD12A.23;gbkey=Gene;gene=SCD12A.23;gene_biotype=protein_coding;gene_synonym=SCD12A.23;locus_tag=SCO4340
NC_003888.3	RefSeq	CDS	4754366	4756015	.	+	0	ID=cds4292;Parent=gene4387;Dbxref=Genbank:NP_628511.1,GeneID:1099780;Name=NP_628511.1;Note=SCD12A.23%2C possible integrase%2C len: 549 aa%3B similar to TR:CAB75384 (EMBL:AL139298) Streptomyces coelicolor integrase SCC88.14%2C 518 aa%3B fasta scores: opt: 232 z-score: 262.7 E(): 3.6e-07%3B 26.5%25 identity in 548 aa overlap;gbkey=CDS;gene=SCD12A.23;product=integrase;protein_id=NP_628511.1;transl_table=11
NC_003888.3	RefSeq	gene	4756150	4756464	.	+	.	ID=gene4388;Dbxref=GeneID:1099781;Name=SCD12A.24;gbkey=Gene;gene=SCD12A.24;gene_biotype=protein_coding;gene_synonym=SCD12A.24;locus_tag=SCO4341
NC_003888.3	RefSeq	CDS	4756150	4756464	.	+	0	ID=cds4293;Parent=gene4388;Dbxref=Genbank:NP_628512.1,GeneID:1099781;Name=NP_628512.1;Note=SCD12A.24%2C unknown%2C len: 104 aa;gbkey=CDS;gene=SCD12A.24;product=hypothetical protein;protein_id=NP_628512.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4756803	4756825	.	-	.	ID=id5427;Note=Perfect terminal inverted repeat: CCTTCCCGGTCAGAGCACTAGGG;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4756861	4757403	.	+	.	ID=gene4389;Dbxref=GeneID:1099782;Name=SCD12A.25;gbkey=Gene;gene=SCD12A.25;gene_biotype=protein_coding;gene_synonym=SCD12A.25;locus_tag=SCO4342
NC_003888.3	RefSeq	CDS	4756861	4757403	.	+	0	ID=cds4294;Parent=gene4389;Dbxref=Genbank:NP_628513.1,GeneID:1099782;Name=NP_628513.1;Note=SCD12A.25%2C hypothetical protein%2C len: 180 aa%3B similar to TR:Q9X9V2 (EMBL:Y18817) Streptomyces coelicolor A3(2) mini-circle protein ORF7%2C 165 aa%3B fasta scores: opt: 166 z-score: 222.3 E(): 6.4e-05%3B 35.3%25 identity in 167 aa overlap and to SW:YM2_STRCO (EMBL:X15942) Streptomyces coelicolor mini-circle hypothetical 13.3 kD protein%2C 122 aa%3B fasta scores: opt: 165 z-score: 223.0 E(): 5.8e-05%3B 33.6%25 identity in 125 aa overlap;gbkey=CDS;gene=SCD12A.25;product=hypothetical protein;protein_id=NP_628513.1;transl_table=11
NC_003888.3	RefSeq	gene	4757436	4757633	.	-	.	ID=gene4390;Dbxref=GeneID:1099783;Name=SCD12A.26c;gbkey=Gene;gene=SCD12A.26c;gene_biotype=protein_coding;gene_synonym=SCD12A.26c;locus_tag=SCO4343
NC_003888.3	RefSeq	CDS	4757436	4757633	.	-	0	ID=cds4295;Parent=gene4390;Dbxref=Genbank:NP_628514.1,GeneID:1099783;Name=NP_628514.1;Note=SCD12A.26c%2C unknown%2C len: 65 aa%3B similar to C-terminal part of TR:Q52559 (EMBL:L48985) Pseudomonas syringae transposase TnpA%2C 343 aa%3B fasta scores: opt: 87 z-score: 136.6 E(): 3.8%3B 34.0%25 identity in 47 aa overlap;gbkey=CDS;gene=SCD12A.26c;product=hypothetical protein;protein_id=NP_628514.1;transl_table=11
NC_003888.3	RefSeq	gene	4757715	4758560	.	-	.	ID=gene4391;Dbxref=GeneID:1099784;Name=SCD12A.27c;gbkey=Gene;gene=SCD12A.27c;gene_biotype=protein_coding;gene_synonym=SCD12A.27c;locus_tag=SCO4344
NC_003888.3	RefSeq	CDS	4757715	4758560	.	-	0	ID=cds4296;Parent=gene4391;Dbxref=Genbank:NP_628515.1,GeneID:1099784;Name=NP_628515.1;Note=SCD12A.27c%2C possible transposase%2C len: 281 aa%3B similar to TR:BAA85092 (EMBL:AB029445) Shigella sonnei transposase TPase%2C 343 aa%3B fasta scores: opt: 181 z-score: 222.1 E(): 6.5e-05%3B 21.9%25 identity in 274 aa overlap;gbkey=CDS;gene=SCD12A.27c;product=transposase;protein_id=NP_628515.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4758565	4758587	.	-	.	ID=id5428;Note=Perfect terminal inverted repeat: CCCTAGTGCTCTGACCGGGAAGG;gbkey=misc_feature
NC_003888.3	RefSeq	gene	4759042	4759623	.	+	.	ID=gene4392;Dbxref=GeneID:1099785;Name=SCD12A.28;gbkey=Gene;gene=SCD12A.28;gene_biotype=protein_coding;gene_synonym=SCD12A.28;locus_tag=SCO4345
NC_003888.3	RefSeq	CDS	4759042	4759623	.	+	0	ID=cds4297;Parent=gene4392;Dbxref=Genbank:NP_628516.1,GeneID:1099785;Name=NP_628516.1;Note=SCD12A.28%2C unknown%2C len: 193 aa;gbkey=CDS;gene=SCD12A.28;product=hypothetical protein;protein_id=NP_628516.1;transl_table=11
NC_003888.3	RefSeq	gene	4759891	4761000	.	-	.	ID=gene4393;Dbxref=GeneID:1099786;Name=SCD12A.29c;gbkey=Gene;gene=SCD12A.29c;gene_biotype=protein_coding;gene_synonym=SCD12A.29c,SCD19.01c;locus_tag=SCO4346
NC_003888.3	RefSeq	CDS	4759891	4761000	.	-	0	ID=cds4298;Parent=gene4393;Dbxref=Genbank:NP_733634.1,GeneID:1099786;Name=NP_733634.1;Note=SCD19.01c%2C unknown(fragment)%2C len: >119 aa. Contains two TTA leucine codons%2C possible targets for bldA regulation~SCD12A.29c%2C unknown (fragment)%2C len: > 282 aa;gbkey=CDS;gene=SCD12A.29c;product=hypothetical protein;protein_id=NP_733634.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4760677	4760679	.	-	.	ID=id5429;Dbxref=GeneID:1099786;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD12A.29c
NC_003888.3	RefSeq	sequence_feature	4760780	4760785	.	+	.	ID=id5430;Note=DraI site matched TTTAAA;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4760782	4760784	.	-	.	ID=id5431;Dbxref=GeneID:1099786;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD12A.29c
NC_003888.3	RefSeq	gene	4761245	4761673	.	-	.	ID=gene4394;Dbxref=GeneID:1099787;Name=SCD19.02c;gbkey=Gene;gene=SCD19.02c;gene_biotype=protein_coding;gene_synonym=SCD19.02c;locus_tag=SCO4347
NC_003888.3	RefSeq	CDS	4761245	4761673	.	-	0	ID=cds4299;Parent=gene4394;Dbxref=Genbank:NP_628517.1,GeneID:1099787;Name=NP_628517.1;Note=SCD19.02c%2C unknown%2C len: 142 aa. High content in alanine%2C arginine and leucine amino acid residues;gbkey=CDS;gene=SCD19.02c;product=hypothetical protein;protein_id=NP_628517.1;transl_table=11
NC_003888.3	RefSeq	gene	4761670	4763841	.	-	.	ID=gene4395;Dbxref=GeneID:1099788;Name=SCD19.03c;gbkey=Gene;gene=SCD19.03c;gene_biotype=protein_coding;gene_synonym=SCD19.03c;locus_tag=SCO4348
NC_003888.3	RefSeq	CDS	4761670	4763841	.	-	0	ID=cds4300;Parent=gene4395;Dbxref=Genbank:NP_628518.1,GeneID:1099788;Name=NP_628518.1;Note=SCD19.03c%2C hypothetical protein%2C len: 723 aa%3B similar to some plasmid derived hypothetical proteins%2C e.g. TR:O85873 (EMBL:AF079317) Sphingomonas aromaticivorans hypothetical 81.3 kDa protein (plasmid pNL1)%2C 741 aa%3B fasta scores: opt: 421 z-score: 478.1 E(): 4e-19%3B 29.7%25 identity in 758 aa overlap;gbkey=CDS;gene=SCD19.03c;product=hypothetical protein;protein_id=NP_628518.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4761684	4761687	.	-	.	ID=id5432;Dbxref=GeneID:1099788;gbkey=RBS;gene=SCD19.03c
NC_003888.3	RefSeq	gene	4763838	4765553	.	-	.	ID=gene4396;Dbxref=GeneID:1099789;Name=SCD19.04c;gbkey=Gene;gene=SCD19.04c;gene_biotype=protein_coding;gene_synonym=SCD19.04c;locus_tag=SCO4349
NC_003888.3	RefSeq	CDS	4763838	4765553	.	-	0	ID=cds4301;Parent=gene4396;Dbxref=Genbank:NP_628519.1,GeneID:1099789;Name=NP_628519.1;Note=SCD19.04c%2C hypothetical protein%2C len: 571 aa%3B similar to some plasmid derived hypothetical proteins%2C e.g. TR:O85872 (EMBL:AF079317) Sphingomonas aromaticivorans hypothetical 65.3 kDa protein (plasmid pNL1)%2C 595 aa%3B fasta scores: opt: 344 z-score: 399.6 E(): 9.4e-15%3B 26.7%25 identity in 561 aa overlap. Contains two TTA leucine codons%2C possible targets for bldA regulation;gbkey=CDS;gene=SCD19.04c;product=hypothetical protein;protein_id=NP_628519.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4763852	4763856	.	-	.	ID=id5433;Dbxref=GeneID:1099789;gbkey=RBS;gene=SCD19.04c
NC_003888.3	RefSeq	sequence_feature	4764621	4764623	.	-	.	ID=id5434;Dbxref=GeneID:1099789;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD19.04c
NC_003888.3	RefSeq	sequence_feature	4764633	4764635	.	-	.	ID=id5435;Dbxref=GeneID:1099789;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD19.04c
NC_003888.3	RefSeq	gene	4765553	4766905	.	-	.	ID=gene4397;Dbxref=GeneID:1099790;Name=SCD19.05c;gbkey=Gene;gene=SCD19.05c;gene_biotype=protein_coding;gene_synonym=SCD19.05c;locus_tag=SCO4350
NC_003888.3	RefSeq	CDS	4765553	4766905	.	-	0	ID=cds4302;Parent=gene4397;Dbxref=Genbank:NP_628520.1,GeneID:1099790;Name=NP_628520.1;Note=SCD19.05c%2C possible integrase%2C len: 475 aa%3B highly similar to TR:Q9RAJ3 (EMBL:AJ250372) Mycobacterium sp. GP1 integrase IntM%2C 451 aa%3B fasta scores: opt: 2152 z-score: 2497.3 E(): 0%3B 72.8%25 identity in 441 aa overlap;gbkey=CDS;gene=SCD19.05c;product=integrase;protein_id=NP_628520.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4765564	4765567	.	-	.	ID=id5436;Dbxref=GeneID:1099790;gbkey=RBS;gene=SCD19.05c
NC_003888.3	RefSeq	gene	4767115	4767627	.	+	.	ID=gene4398;Dbxref=GeneID:1099791;Name=SCD19.06;gbkey=Gene;gene=SCD19.06;gene_biotype=protein_coding;gene_synonym=SCD19.06;locus_tag=SCO4351
NC_003888.3	RefSeq	CDS	4767115	4767627	.	+	0	ID=cds4303;Parent=gene4398;Dbxref=Genbank:NP_628521.1,GeneID:1099791;Name=NP_628521.1;Note=SCD19.06%2C probable DNA invertase%2C len: 170 aa%3B similar to SW:DNIV_BPP1 (EMBL:X01828) Bacteriophage P1 DNA-invertase (site-specific recombinase) Cin%2C 186 aa%3B fasta scores: opt: 471 z-score: 560.8 E(): 9.9e-24%3B 48.8%25 identity in 170 aa overlap. Contains Pfam match to entry PF00239 recombinase%2C Site-specific recombinases;gbkey=CDS;gene=SCD19.06;product=DNA invertase;protein_id=NP_628521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4767115	4767606	.	+	.	ID=id5437;Dbxref=GeneID:1099791;Note=Pfam match to entry PF00239 recombinase%2C Site-specific recombinases%2C score 208.80%2C E-value 8.1e-59;gbkey=misc_feature;gene=SCD19.06
NC_003888.3	RefSeq	repeat_region	4767645	4767836	.	+	.	ID=id5438;Note=probable inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4767684	4768676	.	+	.	ID=gene4399;Dbxref=GeneID:1099792;Name=SCD19.07;gbkey=Gene;gene=SCD19.07;gene_biotype=protein_coding;gene_synonym=SCD19.07;locus_tag=SCO4352
NC_003888.3	RefSeq	CDS	4767684	4768676	.	+	0	ID=cds4304;Parent=gene4399;Dbxref=Genbank:NP_628522.1,GeneID:1099792;Name=NP_628522.1;Note=SCD19.07%2C probable oxidoreductase%2C len: 330 aa%3B similar to SW:NORA_ASPFL (EMBL:U32377) Aspergillus flavus norsolorinic acid reductase (EC 1.1.1.-) NorA%2C 388 aa%3B fasta scores: opt: 508 z-score: 583.8 E(): 5.2e-25%3B 32.1%25 identity in 330 aa overlap and to TR:CAB93413 (EMBL:AL357524) Streptomyces coelicolor reductase SCD12A.22c%2C 284 aa%3B fasta scores: opt: 1699 z-score: 1942.0 E(): 0%3B 87.3%25 identity in 284 aa overlap. Contains Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family;gbkey=CDS;gene=SCD19.07;product=oxidoreductase;protein_id=NP_628522.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4768002	4768064	.	+	.	ID=id5439;Dbxref=GeneID:1099792;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 12.70%2C E-value 0.013;gbkey=misc_feature;gene=SCD19.07
NC_003888.3	RefSeq	gene	4768814	4768972	.	-	.	ID=gene4400;Dbxref=GeneID:1099793;Name=SCD19.08c;gbkey=Gene;gene=SCD19.08c;gene_biotype=protein_coding;gene_synonym=SCD19.08c;locus_tag=SCO4353
NC_003888.3	RefSeq	CDS	4768814	4768972	.	-	0	ID=cds4305;Parent=gene4400;Dbxref=Genbank:NP_628523.1,GeneID:1099793;Name=NP_628523.1;Note=SCD19.08c%2C hypothetical protein%2C len: 52 aa%3B similar to N-terminal domain of TR:Q9S0N9 (EMBL:AB032523) Streptomyces avermitilis DTDP-4-keto-6-deoxy-L-hexose 2%2C3-reductase AveBVIII%2C 347 aa%3B fasta scores: opt: 165 z-score: 253.6 E(): 1.3e-06%3B 51.0%25 identity in 49 aa overlap and to N-terminal domain of Streptomyces coelicolor SCD19.07%2C 330 aa%3B fasta scores: opt: 293 z-score: 403.7 E(): 7.6e-17%3B 88.2%25 identity in 51 aa overlap;gbkey=CDS;gene=SCD19.08c;product=hypothetical protein;protein_id=NP_628523.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4768820	4769011	.	-	.	ID=id5440;Note=possible inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4769020	4769703	.	-	.	ID=gene4401;Dbxref=GeneID:1099794;Name=SCD19.09c;gbkey=Gene;gene=SCD19.09c;gene_biotype=protein_coding;gene_synonym=SCD19.09c;locus_tag=SCO4354
NC_003888.3	RefSeq	CDS	4769020	4769703	.	-	0	ID=cds4306;Parent=gene4401;Dbxref=Genbank:NP_628524.1,GeneID:1099794;Name=NP_628524.1;Note=SCD19.09c%2C hypothetical protein%2C len: 227 aa%3B similar to TR:Q9RDD3 (EMBL:AL136503) Streptomyces coelicolor hypothetical 25.0 kDa protein SCC77.25c%2C 224 aa%3B fasta scores: opt: 234 z-score: 297.1 E(): 4.8e-09%3B 30.3%25 identity in 208 aa overlap;gbkey=CDS;gene=SCD19.09c;product=hypothetical protein;protein_id=NP_628524.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4769691	4769695	.	+	.	ID=id5441;gbkey=RBS
NC_003888.3	RefSeq	gene	4769704	4770477	.	+	.	ID=gene4402;Dbxref=GeneID:1099795;Name=SCD19.10;gbkey=Gene;gene=SCD19.10;gene_biotype=protein_coding;gene_synonym=SCD19.10;locus_tag=SCO4355
NC_003888.3	RefSeq	CDS	4769704	4770477	.	+	0	ID=cds4307;Parent=gene4402;Dbxref=Genbank:NP_628525.1,GeneID:1099795;Name=NP_628525.1;Note=SCD19.10%2C probable nucleotidyltransferase%2C len: 257 aa%3B similar to SW:S3AD_STAAU (EMBL:X02588) Staphylococcus aureus streptomycin 3''-adenylyltransferase (EC 2.7.7.47) Spc%2C 260 aa%3B fasta scores: opt: 644 z-score: 760.8 E(): 0%3B 44.5%25 identity in 227 aa overlap. Contains Pfam match to entry PF01909 NTP_transf_2%2C Nucleotidyltransferase domain;gbkey=CDS;gene=SCD19.10;product=nucleotidyltransferase;protein_id=NP_628525.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4769728	4770021	.	+	.	ID=id5442;Dbxref=GeneID:1099795;Note=Pfam match to entry PF01909 NTP_transf_2%2C Nucleotidyltransferase domain%2C score 30.90%2C E-value 3e-05;gbkey=misc_feature;gene=SCD19.10
NC_003888.3	RefSeq	gene	4770450	4771139	.	-	.	ID=gene4403;Dbxref=GeneID:1099796;Name=SCD19.11c;gbkey=Gene;gene=SCD19.11c;gene_biotype=protein_coding;gene_synonym=SCD19.11c;locus_tag=SCO4356
NC_003888.3	RefSeq	CDS	4770450	4771139	.	-	0	ID=cds4308;Parent=gene4403;Dbxref=Genbank:NP_628526.1,GeneID:1099796;Name=NP_628526.1;Note=SCD19.11c%2C unknown%2C len: 229 aa;gbkey=CDS;gene=SCD19.11c;product=hypothetical protein;protein_id=NP_628526.1;transl_table=11
NC_003888.3	RefSeq	gene	4771195	4772241	.	+	.	ID=gene4404;Dbxref=GeneID:1099797;Name=SCD19.12;gbkey=Gene;gene=SCD19.12;gene_biotype=protein_coding;gene_synonym=SCD19.12;locus_tag=SCO4357
NC_003888.3	RefSeq	CDS	4771195	4772241	.	+	0	ID=cds4309;Parent=gene4404;Dbxref=Genbank:NP_628527.1,GeneID:1099797;Name=NP_628527.1;Note=SCD19.12%2C possible integral membrane protein%2C len: 348 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD19.12;product=hypothetical protein;protein_id=NP_628527.1;transl_table=11
NC_003888.3	RefSeq	gene	4772215	4773021	.	-	.	ID=gene4405;Dbxref=GeneID:1099798;Name=SCD19.13c;gbkey=Gene;gene=SCD19.13c;gene_biotype=protein_coding;gene_synonym=SCD19.13c;locus_tag=SCO4358
NC_003888.3	RefSeq	CDS	4772215	4773021	.	-	0	ID=cds4310;Parent=gene4405;Dbxref=Genbank:NP_628528.1,GeneID:1099798;Name=NP_628528.1;Note=SCD19.13c%2C probable tetR family transcriptional regulatory protein%2C len: 268 aa%3B similar to TR:Q9S2B2 (EMBL:AL096849) Streptomyces coelicolor transcriptional regulator SCI11.07c%2C 234 aa%3B fasta scores: opt: 472 z-score: 546.8 E(): 6e-23%3B 40.2%25 identity in 229 aa overlap and to TR:Q53901 (EMBL:M64683) Streptomyces coelicolor ORF1-4 (actII)%2C 259 aa%3B fasta scores: opt: 333 z-score: 387.9 E(): 4.2e-14%3B 32.1%25 identity in 243 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 56..77 (+3.34 SD);gbkey=CDS;gene=SCD19.13c;product=TetR family transcriptional regulator;protein_id=NP_628528.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4772764	4772904	.	-	.	ID=id5443;Dbxref=GeneID:1099798;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.20%2C E-value 4.7e-10;gbkey=misc_feature;gene=SCD19.13c
NC_003888.3	RefSeq	gene	4773118	4774128	.	+	.	ID=gene4406;Dbxref=GeneID:1099799;Name=SCD19.14;gbkey=Gene;gene=SCD19.14;gene_biotype=protein_coding;gene_synonym=SCD19.14;locus_tag=SCO4359
NC_003888.3	RefSeq	CDS	4773118	4774128	.	+	0	ID=cds4311;Parent=gene4406;Dbxref=Genbank:NP_628529.1,GeneID:1099799;Name=NP_628529.1;Note=SCD19.14%2C probable ABC transport system ATP-binding protein%2C len: 336 aa%3B similar to SW:DRRA_STRPE (EMBL:M73758) Streptomyces peucetius daunorubicin resistance ATP-binding protein DrrA%2C 330 aa%3B fasta scores: opt: 912 z-score: 964.7 E(): 0%3B 49.5%25 identity in 327 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCD19.14;product=ABC transporter ATP-binding protein;protein_id=NP_628529.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4773211	4773756	.	+	.	ID=id5444;Dbxref=GeneID:1099799;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 171.60%2C E-value 1.3e-47;gbkey=misc_feature;gene=SCD19.14
NC_003888.3	RefSeq	sequence_feature	4773232	4773255	.	+	.	ID=id5445;Dbxref=GeneID:1099799;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD19.14
NC_003888.3	RefSeq	sequence_feature	4773529	4773573	.	+	.	ID=id5446;Dbxref=GeneID:1099799;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCD19.14
NC_003888.3	RefSeq	ribosome_entry_site	4774108	4774114	.	+	.	ID=id5447;Dbxref=GeneID:1099799;gbkey=RBS;gene=SCD19.14
NC_003888.3	RefSeq	gene	4774125	4774967	.	+	.	ID=gene4407;Dbxref=GeneID:1099800;Name=SCD19.15;gbkey=Gene;gene=SCD19.15;gene_biotype=protein_coding;gene_synonym=SCD19.15;locus_tag=SCO4360
NC_003888.3	RefSeq	CDS	4774125	4774967	.	+	0	ID=cds4312;Parent=gene4407;Dbxref=Genbank:NP_628530.1,GeneID:1099800;Name=NP_628530.1;Note=SCD19.15%2C probable ABC transport system integral membrane protein%2C len: 280 aa%3B similar to SW:DRRB_STRPE (EMBL:M73758) Streptomyces peucetius daunorubicin resistance transmembrane protein DrrB%2C 283 aa%3B fasta scores: opt: 413 z-score: 474.0 E(): 6.8e-19%3B 31.6%25 identity in 244 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD19.15;product=ABC transporter;protein_id=NP_628530.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4775076	4775079	.	+	.	ID=id5448;gbkey=RBS
NC_003888.3	RefSeq	gene	4775082	4775639	.	+	.	ID=gene4408;Dbxref=GeneID:1099801;Name=SCD19.16;gbkey=Gene;gene=SCD19.16;gene_biotype=protein_coding;gene_synonym=SCD19.16;locus_tag=SCO4361
NC_003888.3	RefSeq	CDS	4775082	4775639	.	+	0	ID=cds4313;Parent=gene4408;Dbxref=Genbank:NP_628531.1,GeneID:1099801;Name=NP_628531.1;Note=SCD19.16%2C possible integral membrane protein%2C len: 185 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD19.16;product=hypothetical protein;protein_id=NP_628531.1;transl_table=11
NC_003888.3	RefSeq	gene	4775642	4776853	.	+	.	ID=gene4409;Dbxref=GeneID:1099802;Name=SCD19.17;gbkey=Gene;gene=SCD19.17;gene_biotype=protein_coding;gene_synonym=SCD19.17;locus_tag=SCO4362
NC_003888.3	RefSeq	CDS	4775642	4776853	.	+	0	ID=cds4314;Parent=gene4409;Dbxref=Genbank:NP_628532.1,GeneID:1099802;Name=NP_628532.1;Note=SCD19.17%2C possible two component system sensor kinase%2C len: 403 aa%3B similar to TR:O70000 (EMBL:AL022374) Streptomyces coelicolor two-component sensor SC5B8.14%2C 384 aa%3B fasta scores: opt: 580 z-score: 600.9 E(): 5.7e-26%3B 36.8%25 identity in 353 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD19.17;product=two component system sensor kinase;protein_id=NP_628532.1;transl_table=11
NC_003888.3	RefSeq	gene	4776850	4777530	.	+	.	ID=gene4410;Dbxref=GeneID:1099803;Name=SCD19.18;gbkey=Gene;gene=SCD19.18;gene_biotype=protein_coding;gene_synonym=SCD19.18;locus_tag=SCO4363
NC_003888.3	RefSeq	CDS	4776850	4777530	.	+	0	ID=cds4315;Parent=gene4410;Dbxref=Genbank:NP_628533.1,GeneID:1099803;Name=NP_628533.1;Note=SCD19.18%2C probable two component system response regulator%2C len: 226 aa%3B similar to TR:O70001 (EMBL:AL022374) Streptomyces coelicolor two-component regulator SC5B8.15%2C 229 aa%3B fasta scores: opt: 691 z-score: 751.7 E(): 0%3B 54.4%25 identity in 215 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains possible helix-turn-helix motif at residues 181..202 (+3.68 SD);gbkey=CDS;gene=SCD19.18;product=two component system response regulator;protein_id=NP_628533.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4776880	4777221	.	+	.	ID=id5449;Dbxref=GeneID:1099803;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 113.50%2C E-value 3.9e-30;gbkey=misc_feature;gene=SCD19.18
NC_003888.3	RefSeq	sequence_feature	4777336	4777527	.	+	.	ID=id5450;Dbxref=GeneID:1099803;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 73.60%2C E-value 4.2e-18;gbkey=misc_feature;gene=SCD19.18
NC_003888.3	RefSeq	sequence_feature	4777387	4777470	.	+	.	ID=id5451;Dbxref=GeneID:1099803;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCD19.18
NC_003888.3	RefSeq	gene	4777590	4777967	.	+	.	ID=gene4411;Dbxref=GeneID:1099804;Name=SCD19.19;gbkey=Gene;gene=SCD19.19;gene_biotype=protein_coding;gene_synonym=SCD19.19;locus_tag=SCO4364
NC_003888.3	RefSeq	CDS	4777590	4777967	.	+	0	ID=cds4316;Parent=gene4411;Dbxref=Genbank:NP_628534.1,GeneID:1099804;Name=NP_628534.1;Note=SCD19.19%2C unknown%2C len: 125 aa;gbkey=CDS;gene=SCD19.19;product=hypothetical protein;protein_id=NP_628534.1;transl_table=11
NC_003888.3	RefSeq	gene	4778003	4778245	.	+	.	ID=gene4412;Dbxref=GeneID:1099805;Name=SCD19.20;gbkey=Gene;gene=SCD19.20;gene_biotype=protein_coding;gene_synonym=SCD19.20;locus_tag=SCO4365
NC_003888.3	RefSeq	CDS	4778003	4778245	.	+	0	ID=cds4317;Parent=gene4412;Dbxref=Genbank:NP_628535.1,GeneID:1099805;Name=NP_628535.1;Note=SCD19.20%2C unknown%2C len: 80 aa;gbkey=CDS;gene=SCD19.20;product=hypothetical protein;protein_id=NP_628535.1;transl_table=11
NC_003888.3	RefSeq	gene	4778229	4779320	.	-	.	ID=gene4413;Dbxref=GeneID:1099806;Name=SCD19.21c;gbkey=Gene;gene=SCD19.21c;gene_biotype=protein_coding;gene_synonym=SCD19.21c;locus_tag=SCO4366
NC_003888.3	RefSeq	CDS	4778229	4779320	.	-	0	ID=cds4318;Parent=gene4413;Dbxref=Genbank:NP_628536.1,GeneID:1099806;Name=NP_628536.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate;gbkey=CDS;gene=SCD19.21c;product=phosphoserine aminotransferase;protein_id=NP_628536.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4779452	4779456	.	+	.	ID=id5452;gbkey=RBS
NC_003888.3	RefSeq	gene	4779458	4782313	.	+	.	ID=gene4414;Dbxref=GeneID:1099807;Name=SCD19.22;gbkey=Gene;gene=SCD19.22;gene_biotype=protein_coding;gene_synonym=SCD19.22;locus_tag=SCO4367
NC_003888.3	RefSeq	CDS	4779458	4782313	.	+	0	ID=cds4319;Parent=gene4414;Dbxref=Genbank:NP_628537.1,GeneID:1099807;Name=NP_628537.1;Note=SCD19.22%2C possible oxidoreductase%2C len: 951 aa%3B N-terminal domain similar to SW:GLCD_ECOLI (EMBL:L43490) Escherichia coli glycolate oxidase subunit GlcD%2C 499 aa%3B fasta scores: opt: 351 z-score: 387.8 E(): 4.3e-14%3B 31.2%25 identity in 497 aa overlap and C-terminal domain similar to SW:GLCF_ECOLI (EMBL:L43490) Escherichia coli glycolate oxidase iron-sulfur subunit GlcF%2C 407 aa%3B blastp scores: Score%3D 113 (39.8 bits)%2C Expect%3D 8.0e-10%2C Sum P(2)%3D 8.0e-10%3B Identities%3D 26/78 (33%25)%2C Positives%3D 39/78 (50%25) and Identities%3D 61/237 (25%25)%2C Positives%3D 91/237 (38%25). Contains Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain and match to Prosite entry PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=SCD19.22;product=oxidoreductase;protein_id=NP_628537.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4779473	4780174	.	+	.	ID=id5453;Dbxref=GeneID:1099807;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 188.70%2C E-value 9.4e-53;gbkey=misc_feature;gene=SCD19.22
NC_003888.3	RefSeq	sequence_feature	4781210	4781245	.	+	.	ID=id5454;Dbxref=GeneID:1099807;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SCD19.22
NC_003888.3	RefSeq	gene	4782332	4783492	.	-	.	ID=gene4415;Dbxref=GeneID:1099808;Name=SCD19.23c;gbkey=Gene;gene=SCD19.23c;gene_biotype=protein_coding;gene_synonym=SCD19.23c;locus_tag=SCO4368
NC_003888.3	RefSeq	CDS	4782332	4783492	.	-	0	ID=cds4320;Parent=gene4415;Dbxref=Genbank:NP_628538.1,GeneID:1099808;Name=NP_628538.1;Note=SCD19.23c%2C possible lipase (hypothetical protein)%2C len: 386 aa%3B similar to TR:Q9Z360 (EMBL:AL035654) Streptomyces coelicolor lipase SCE8.12c%2C 391 aa%3B fasta scores: opt: 867 z-score: 923.3 E(): 0%3B 44.3%25 identity in 393 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD19.23c;product=lipase;protein_id=NP_628538.1;transl_table=11
NC_003888.3	RefSeq	gene	4783583	4785205	.	+	.	ID=gene4416;Dbxref=GeneID:1099809;Name=2SCD52.01;gbkey=Gene;gene=2SCD52.01;gene_biotype=protein_coding;gene_synonym=2SCD52.01,SCD10.01;locus_tag=SCO4369
NC_003888.3	RefSeq	CDS	4783583	4785205	.	+	0	ID=cds4321;Parent=gene4416;Dbxref=Genbank:NP_733635.1,GeneID:1099809;Name=NP_733635.1;Note=2SCD52.01%2C hypothetical protein (fragment)%2C len: >312 aa%3B similar to N-terminal region of TR:CAB95880 (EMBL:AL359988) Streptomyces coelicolor hypothetical 26.1 kDa protein (fragment) SCD10.01%2C 261 aa%3B fasta scores: opt: 232 z-score: 233.3 E(): 1.7e-05%3B 32.0%25 identity in 225 aa overlap~SCD10.01%2C unknown (fragment)%2C len: >261 aa. High content in glycine and aspartate amino acid residues. Contains 2x Pfam match to entry PF01839 FG-GAP%2C FG-GAP repeat;gbkey=CDS;gene=2SCD52.01;product=hypothetical protein;protein_id=NP_733635.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4784786	4784917	.	+	.	ID=id5455;Dbxref=GeneID:1099809;Note=Pfam match to entry PF01839 FG-GAP%2C FG-GAP repeat%2C score 19.10%2C E-value 0.066;gbkey=misc_feature;gene=2SCD52.01
NC_003888.3	RefSeq	sequence_feature	4784978	4785148	.	+	.	ID=id5456;Dbxref=GeneID:1099809;Note=Pfam match to entry PF01839 FG-GAP%2C FG-GAP repeat%2C score 29.40%2C E-value 8.3e-05;gbkey=misc_feature;gene=2SCD52.01
NC_003888.3	RefSeq	gene	4785438	4786457	.	+	.	ID=gene4417;Dbxref=GeneID:1099810;Name=SCD10.02;gbkey=Gene;gene=SCD10.02;gene_biotype=protein_coding;gene_synonym=SCD10.02;locus_tag=SCO4370
NC_003888.3	RefSeq	CDS	4785438	4786457	.	+	0	ID=cds4322;Parent=gene4417;Dbxref=Genbank:NP_628539.1,GeneID:1099810;Name=NP_628539.1;Note=SCD10.02%2C possible transposase%2C len: 339 aa%3B identical to TR:CAB71807 (EMBL:AL138662) Streptomyces coelicolor transposase SC8E4A.02%2C 339 aa;gbkey=CDS;gene=SCD10.02;product=transposase;protein_id=NP_628539.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4786544	4786547	.	+	.	ID=id5457;gbkey=RBS
NC_003888.3	RefSeq	gene	4786553	4787116	.	+	.	ID=gene4418;Dbxref=GeneID:1099811;Name=SCD10.03;gbkey=Gene;gene=SCD10.03;gene_biotype=protein_coding;gene_synonym=SCD10.03;locus_tag=SCO4371
NC_003888.3	RefSeq	CDS	4786553	4787116	.	+	0	ID=cds4323;Parent=gene4418;Dbxref=Genbank:NP_628540.1,GeneID:1099811;Name=NP_628540.1;Note=SCD10.03%2C conserved hypothetical protein%2C len: 187 aa%3B similar to TR:CAB93416 (EMBL:AL357524) Streptomyces coelicolor hypothetical 20.0 kD protein SCD12A.25%2C 180 aa%3B fasta scores: opt: 216 z-score: 277.0 E(): 5.9e-08%3B 32.0%25 identity in 178 aa overlap. Contains also a 3x degenerate repeat (T/P)TTE;gbkey=CDS;gene=SCD10.03;product=hypothetical protein;protein_id=NP_628540.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4786556	4786591	.	+	.	ID=id5458;Dbxref=GeneID:1099811;Note=3x repeat unit translated into SCD10.03;gbkey=repeat_region;gene=SCD10.03
NC_003888.3	RefSeq	gene	4787160	4787774	.	-	.	ID=gene4419;Dbxref=GeneID:1099812;Name=SCD10.04c;gbkey=Gene;gene=SCD10.04c;gene_biotype=protein_coding;gene_synonym=SCD10.04c;locus_tag=SCO4372
NC_003888.3	RefSeq	CDS	4787160	4787774	.	-	0	ID=cds4324;Parent=gene4419;Dbxref=Genbank:NP_628541.1,GeneID:1099812;Name=NP_628541.1;Note=SCD10.04c%2C unknown%2C len: 204 aa;gbkey=CDS;gene=SCD10.04c;product=hypothetical protein;protein_id=NP_628541.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4787783	4787786	.	-	.	ID=id5459;gbkey=RBS
NC_003888.3	RefSeq	gene	4787839	4788393	.	-	.	ID=gene4420;Dbxref=GeneID:1099813;Name=SCD10.05c;gbkey=Gene;gene=SCD10.05c;gene_biotype=protein_coding;gene_synonym=SCD10.05c;locus_tag=SCO4373
NC_003888.3	RefSeq	CDS	4787839	4788393	.	-	0	ID=cds4325;Parent=gene4420;Dbxref=Genbank:NP_628542.1,GeneID:1099813;Name=NP_628542.1;Note=SCD10.05c%2C possible mut-like protein%2C len: 184 aa%3B similar to SW:YZGD_BACSU (EMBL:U17168) Bacillus subtilis hypothetical 45.4 kD protein in thiaminase I 5' region YgzD%2C 413 aa%3B fasta scores: opt: 225 z-score: 279.9 E(): 4.1e-08%3B 35.1%25 identity in 148 aa overlap. Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and match to Prosite entry PS00893 mutT domain signature;gbkey=CDS;gene=SCD10.05c;product=mut-like protein;protein_id=NP_628542.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4788043	4788168	.	-	.	ID=id5460;Dbxref=GeneID:1099813;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 29.20%2C E-value 7.6e-07;gbkey=misc_feature;gene=SCD10.05c
NC_003888.3	RefSeq	sequence_feature	4788052	4788111	.	-	.	ID=id5461;Dbxref=GeneID:1099813;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SCD10.05c
NC_003888.3	RefSeq	gene	4788577	4789464	.	+	.	ID=gene4421;Dbxref=GeneID:1099814;Name=SCD10.06;gbkey=Gene;gene=SCD10.06;gene_biotype=protein_coding;gene_synonym=SCD10.06;locus_tag=SCO4374
NC_003888.3	RefSeq	CDS	4788577	4789464	.	+	0	ID=cds4326;Parent=gene4421;Dbxref=Genbank:NP_628543.1,GeneID:1099814;Name=NP_628543.1;Note=SCD10.06%2C possible integral membrane protein%2C len: 295 aa%3B similar to TR:Q9RUT6 (EMBL:AE001976) Deinococcus radiodurans PecM-related protein DR1295%2C 302 aa%3B fasta scores: opt: 769 z-score: 839.6 E(): 0%3B 47.1%25 identity in 291 aa overlap. Contains Pfam match to entry PF00892 DUF6%2C Integral membrane protein. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD10.06;product=hypothetical protein;protein_id=NP_628543.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4789048	4789422	.	+	.	ID=id5462;Dbxref=GeneID:1099814;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein%2C score 59.90%2C E-value 5.3e-14;gbkey=misc_feature;gene=SCD10.06
NC_003888.3	RefSeq	gene	4789565	4790059	.	+	.	ID=gene4422;Dbxref=GeneID:1099815;Name=SCD10.07;gbkey=Gene;gene=SCD10.07;gene_biotype=protein_coding;gene_synonym=SCD10.07;locus_tag=SCO4375
NC_003888.3	RefSeq	CDS	4789565	4790059	.	+	0	ID=cds4327;Parent=gene4422;Dbxref=Genbank:NP_628544.1,GeneID:1099815;Name=NP_628544.1;Note=SCD10.07%2C possible marR-family regulatory protein%2C len: 164 aa%3B similar to TR:CAB87337 (EMBL:AL163672) Streptomyces coelicolor regulatory protein SCE50.15%2C 168 aa%3B fasta scores: opt: 226 z-score: 281.6 E(): 3.3e-08%3B 39.3%25 identity in 135 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SCD10.07;product=MarR family regulatory protein;protein_id=NP_628544.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4789664	4789987	.	+	.	ID=id5463;Dbxref=GeneID:1099815;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 52.20%2C E-value 1.2e-11;gbkey=misc_feature;gene=SCD10.07
NC_003888.3	RefSeq	ribosome_entry_site	4790043	4790048	.	+	.	ID=id5464;Dbxref=GeneID:1099815;gbkey=RBS;gene=SCD10.07
NC_003888.3	RefSeq	gene	4790056	4790565	.	+	.	ID=gene4423;Dbxref=GeneID:1099816;Name=SCD10.08;gbkey=Gene;gene=SCD10.08;gene_biotype=protein_coding;gene_synonym=SCD10.08;locus_tag=SCO4376
NC_003888.3	RefSeq	CDS	4790056	4790565	.	+	0	ID=cds4328;Parent=gene4423;Dbxref=Genbank:NP_628545.1,GeneID:1099816;Name=NP_628545.1;Note=SCD10.08%2C unknown%2C len: 169 aa. Contains 3x degenerate repeat: T(T/A)P and a 2x conserved repeat TTDAA;gbkey=CDS;gene=SCD10.08;product=hypothetical protein;protein_id=NP_628545.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4790065	4790091	.	+	.	ID=id5465;Dbxref=GeneID:1099816;gbkey=repeat_region;gene=SCD10.08
NC_003888.3	RefSeq	repeat_region	4790092	4790121	.	+	.	ID=id5466;Dbxref=GeneID:1099816;gbkey=repeat_region;gene=SCD10.08
NC_003888.3	RefSeq	ribosome_entry_site	4790658	4790662	.	+	.	ID=id5467;gbkey=RBS
NC_003888.3	RefSeq	gene	4790669	4792411	.	+	.	ID=gene4424;Dbxref=GeneID:1099817;Name=SCD10.09;gbkey=Gene;gene=SCD10.09;gene_biotype=protein_coding;gene_synonym=SCD10.09;locus_tag=SCO4377
NC_003888.3	RefSeq	CDS	4790669	4792411	.	+	0	ID=cds4329;Parent=gene4424;Dbxref=Genbank:NP_628546.1,GeneID:1099817;Name=NP_628546.1;Note=SCD10.09%2C probable serine-threonine protein kinase%2C len: 580 aa%3B similar to SW:AFSK_STRCO (EMBL:D15062) Streptomyces coelicolor serine-threonine protein kinase AfsK (EC 2.7.1.-)%2C 799 aa%3B fasta scores: opt: 953 z-score: 715.3 E(): 2.3e-32%3B 43.2%25 identity in 438 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD10.09;product=serine-threonine protein kinase;protein_id=NP_628546.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4790732	4791472	.	+	.	ID=id5468;Dbxref=GeneID:1099817;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 123.60%2C E-value 3.4e-33;gbkey=misc_feature;gene=SCD10.09
NC_003888.3	RefSeq	sequence_feature	4790750	4790818	.	+	.	ID=id5469;Dbxref=GeneID:1099817;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCD10.09
NC_003888.3	RefSeq	sequence_feature	4791086	4791124	.	+	.	ID=id5470;Dbxref=GeneID:1099817;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SCD10.09
NC_003888.3	RefSeq	gene	4792544	4793374	.	+	.	ID=gene4425;Dbxref=GeneID:1099818;Name=SCD10.10;gbkey=Gene;gene=SCD10.10;gene_biotype=protein_coding;gene_synonym=SCD10.10;locus_tag=SCO4378
NC_003888.3	RefSeq	CDS	4792544	4793374	.	+	0	ID=cds4330;Parent=gene4425;Dbxref=Genbank:NP_628547.1,GeneID:1099818;Name=NP_628547.1;Note=SCD10.10%2C conserved hypothetical protein%2C len: 276 aa%3B similar to SW:YO36_MYCTU (EMBL:Z80233) Mycobacterium tuberculosis hypothetical 27.6 kD protein CY10H4.36c%2C 257 aa%3B fasta scores: opt: 1065 z-score: 1157.0 E(): 0%3B 61.5%25 identity in 257 aa overlap;gbkey=CDS;gene=SCD10.10;product=hypothetical protein;protein_id=NP_628547.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4793362	4793365	.	+	.	ID=id5471;Dbxref=GeneID:1099818;gbkey=RBS;gene=SCD10.10
NC_003888.3	RefSeq	gene	4793371	4795047	.	+	.	ID=gene4426;Dbxref=GeneID:1099819;Name=SCD10.11;gbkey=Gene;gene=SCD10.11;gene_biotype=protein_coding;gene_synonym=SCD10.11;locus_tag=SCO4379
NC_003888.3	RefSeq	CDS	4793371	4795047	.	+	0	ID=cds4331;Parent=gene4426;Dbxref=Genbank:NP_628548.1,GeneID:1099819;Name=NP_628548.1;Note=SCD10.11%2C conserved hypothetical protein%2C len: 558 aa%3B similar to TR:O86320 (EMBL:Z79700) Mycobacterium tuberculosis hypothetical 59.1 kD protein aa%3B fasta scores: opt: 2549 z-score: 2481.8 E(): 0%3B 69.0%25 identity in 562 aa overlap;gbkey=CDS;gene=SCD10.11;product=hypothetical protein;protein_id=NP_628548.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4795073	4795078	.	+	.	ID=id5472;gbkey=RBS
NC_003888.3	RefSeq	gene	4795085	4796683	.	+	.	ID=gene4427;Dbxref=GeneID:1099820;Name=SCD10.12;gbkey=Gene;gene=SCD10.12;gene_biotype=protein_coding;gene_synonym=SCD10.12;locus_tag=SCO4380
NC_003888.3	RefSeq	CDS	4795085	4796683	.	+	0	ID=cds4332;Parent=gene4427;Dbxref=Genbank:NP_628549.1,GeneID:1099820;Name=NP_628549.1;Note=SCD10.12%2C probable acetyl/propionyl CoA carboxylase%2C beta subunit%2C len: 532 aa%3B similar to TR:O86318 (EMBL:Z79700) Mycobacterium tuberculosis AccD2%2C 529 aa%3B fasta scores: opt: 2691 z-score: 3002.4 E(): 0%3B 75.5%25 identity in 530 aa overlap and to TR:AAF35258 (EMBL:AF059510) Arabidopsis thaliana 3-methylcrotonyl-CoA carbosylase non-biotinylated subunit (EC 6.4.1.4) MccB%2C 587 aa%3B fasta scores: opt: 1186 z-score: 1323.2 E(): 0%3B 48.0%25 identity in 546 aa overlap. Contains Pfam match to entry PF01039 Carboxyl_trans%2C Carboxyl transferase domain;gbkey=CDS;gene=SCD10.12;product=acetyl/propionyl CoA carboxylase subunit beta;protein_id=NP_628549.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4795178	4796680	.	+	.	ID=id5473;Dbxref=GeneID:1099820;Note=Pfam match to entry PF01039 Carboxyl_trans%2C Carboxyl transferase domain%2C score 460.50%2C E-value 1.4e-134;gbkey=misc_feature;gene=SCD10.12
NC_003888.3	RefSeq	gene	4796697	4798541	.	+	.	ID=gene4428;Dbxref=GeneID:1099821;Name=SCD10.13;gbkey=Gene;gene=SCD10.13;gene_biotype=protein_coding;gene_synonym=SCD10.13;locus_tag=SCO4381
NC_003888.3	RefSeq	CDS	4796697	4798541	.	+	0	ID=cds4333;Parent=gene4428;Dbxref=Genbank:NP_628550.1,GeneID:1099821;Name=NP_628550.1;Note=SCD10.13%2C probable acetyl/propionyl CoA carboxylase%2C alpha subunit%2C len: 614 aa%3B similar to TR:CAB87214 (EMBL:AL163641) Streptomyces coelicolor acetyl/propionyl CoA carboxylase%2C alpha subunit AccC%2C 646 aa%3B fasta scores: opt: 1088 z-score: 1184.1 E(): 0%3B 46.6%25 identity in 644 aa overlap and to SW:BCCA_MYCTU (EMBL:Z19549) Mycobacterium tuberculosis acetyl/propionyl-coenzyme A carboxylase alpha chain AccA1%2C 654 aa %3Bfasta scores: opt: 939 z-score: 1022.0 E(): 0%3B 43.2%25 identity in 655 aa overlap. Contains 2x Pfam matches to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes and matches to Prosite entries PS00867 Carbamoyl-phosphate synthase subdomain signature 2 and PS00188 Biotin-requiring enzymes attachment site;gbkey=CDS;gene=SCD10.13;product=acetyl/propionyl CoA carboxylase subunit alpha;protein_id=NP_628550.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4796706	4797065	.	+	.	ID=id5474;Dbxref=GeneID:1099821;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 161.00%2C E-value 3.8e-45;gbkey=misc_feature;gene=SCD10.13
NC_003888.3	RefSeq	sequence_feature	4797105	4797743	.	+	.	ID=id5475;Dbxref=GeneID:1099821;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 303.50%2C E-value 2.5e-87;gbkey=misc_feature;gene=SCD10.13
NC_003888.3	RefSeq	sequence_feature	4797498	4797521	.	+	.	ID=id5476;Dbxref=GeneID:1099821;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=SCD10.13
NC_003888.3	RefSeq	sequence_feature	4798320	4798529	.	+	.	ID=id5477;Dbxref=GeneID:1099821;Note=Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C score 56.50%2C E-value 5.9e-13;gbkey=misc_feature;gene=SCD10.13
NC_003888.3	RefSeq	sequence_feature	4798398	4798451	.	+	.	ID=id5478;Dbxref=GeneID:1099821;Note=PS00188 Biotin-requiring enzymes attachment site;gbkey=misc_feature;gene=SCD10.13
NC_003888.3	RefSeq	ribosome_entry_site	4798603	4798607	.	+	.	ID=id5479;gbkey=RBS
NC_003888.3	RefSeq	gene	4798612	4799760	.	+	.	ID=gene4429;Dbxref=GeneID:1099822;Name=SCD10.14;gbkey=Gene;gene=SCD10.14;gene_biotype=protein_coding;gene_synonym=SCD10.14;locus_tag=SCO4382
NC_003888.3	RefSeq	CDS	4798612	4799760	.	+	0	ID=cds4334;Parent=gene4429;Dbxref=Genbank:NP_628551.1,GeneID:1099822;Name=NP_628551.1;Note=SCD10.14%2C probable acyl CoA dehydrogenase%2C len: 382 aa%3B similar to SW:ACDB_MYCTU (EMBL:Z79700) Mycobacterium tuberculosis probable acyl CoA dehydrogenase MTCY10D7.02%2C 388 aa%3B fasta scores: opt: 1694 z-score: 1964.7 E(): 0%3B 64.3%25 identity in 387 aa overlap. Contains 2 Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase;gbkey=CDS;gene=SCD10.14;product=acyl CoA dehydrogenase;protein_id=NP_628551.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4798630	4799181	.	+	.	ID=id5480;Dbxref=GeneID:1099822;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 97.30%2C E-value 9.9e-28;gbkey=misc_feature;gene=SCD10.14
NC_003888.3	RefSeq	sequence_feature	4799230	4799661	.	+	.	ID=id5481;Dbxref=GeneID:1099822;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 89.50%2C E-value 1.9e-25;gbkey=misc_feature;gene=SCD10.14
NC_003888.3	RefSeq	ribosome_entry_site	4799886	4799893	.	+	.	ID=id5482;gbkey=RBS
NC_003888.3	RefSeq	gene	4799896	4801464	.	+	.	ID=gene4430;Dbxref=GeneID:1099823;Name=4CL-2;gbkey=Gene;gene=4CL-2;gene_biotype=protein_coding;gene_synonym=4CL-2,SCD10.15;locus_tag=SCO4383
NC_003888.3	RefSeq	CDS	4799896	4801464	.	+	0	ID=cds4335;Parent=gene4430;Dbxref=Genbank:NP_628552.1,GeneID:1099823;Name=NP_628552.1;Note=SCD10.15%2C 4CL-2%2C 4-coumarate:CoA ligase%2C len: 522 aa%3B similar to many eukaryotic ones%2C e.g. TR:O81139 (EMBL:AF041049) Populus tremuloides 4-coumarate:CoA ligase (EC 6.2.1.12) 4CL2%2C 535 aa%3B fasta scores: opt: 1412 z-score: 1497.3 E(): 0%3B 44.2%25 identity in 532 aa overlap. Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and match to Prosite entry PS00455  AMP-binding domain signature;gbkey=CDS;gene=4CL-2;product=4-coumarate:CoA ligase;protein_id=NP_628552.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4800022	4801251	.	+	.	ID=id5483;Dbxref=GeneID:1099823;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 135.90%2C E-value 7.5e-37;gbkey=misc_feature;gene=4CL-2
NC_003888.3	RefSeq	sequence_feature	4800421	4800456	.	+	.	ID=id5484;Dbxref=GeneID:1099823;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=4CL-2
NC_003888.3	RefSeq	ribosome_entry_site	4801452	4801455	.	+	.	ID=id5485;Dbxref=GeneID:1099823;gbkey=RBS;gene=4CL-2
NC_003888.3	RefSeq	gene	4801461	4802204	.	+	.	ID=gene4431;Dbxref=GeneID:1099824;Name=SCD10.16;gbkey=Gene;gene=SCD10.16;gene_biotype=protein_coding;gene_synonym=SCD10.16;locus_tag=SCO4384
NC_003888.3	RefSeq	CDS	4801461	4802204	.	+	0	ID=cds4336;Parent=gene4431;Dbxref=Genbank:NP_628553.1,GeneID:1099824;Name=NP_628553.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;gene=SCD10.16;product=enoyl-CoA hydratase;protein_id=NP_628553.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4801506	4801982	.	+	.	ID=id5486;Dbxref=GeneID:1099824;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 99.60%2C E-value 6.2e-26;gbkey=misc_feature;gene=SCD10.16
NC_003888.3	RefSeq	gene	4802213	4802821	.	+	.	ID=gene4432;Dbxref=GeneID:1099825;Name=SCD10.17;gbkey=Gene;gene=SCD10.17;gene_biotype=protein_coding;gene_synonym=SCD10.17;locus_tag=SCO4385
NC_003888.3	RefSeq	CDS	4802213	4802821	.	+	0	ID=cds4337;Parent=gene4432;Dbxref=Genbank:NP_628554.1,GeneID:1099825;Name=NP_628554.1;Note=SCD10.17%2C probable tetR-family transcriptional regulator%2C len: 202 aa%3B similar to TR:O33453 (EMBL:U24215) Pseudomonas putida regulatory protein for cym and cmt operons%3B cym repressor CymR%2C 203 aa%3B fasta scores: opt: 245 z-score: 309.4 E(): 9.3e-10%3B 31.4%25 identity in 191 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Contains also a possible helix-turn-helix motif at residues 39..60 (+3.02 SD);gbkey=CDS;gene=SCD10.17;product=TetR family transcriptional regulator;protein_id=NP_628554.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4802279	4802419	.	+	.	ID=id5487;Dbxref=GeneID:1099825;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 59.90%2C E-value 5.3e-14;gbkey=misc_feature;gene=SCD10.17
NC_003888.3	RefSeq	gene	4802849	4803460	.	+	.	ID=gene4433;Dbxref=GeneID:1099826;Name=SCD10.18;gbkey=Gene;gene=SCD10.18;gene_biotype=protein_coding;gene_synonym=SCD10.18;locus_tag=SCO4386
NC_003888.3	RefSeq	CDS	4802849	4803460	.	+	0	ID=cds4338;Parent=gene4433;Dbxref=Genbank:NP_628555.1,GeneID:1099826;Name=NP_628555.1;Note=SCD10.18%2C unknown%2C len: 203 aa;gbkey=CDS;gene=SCD10.18;product=hypothetical protein;protein_id=NP_628555.1;transl_table=11
NC_003888.3	RefSeq	gene	4803479	4804183	.	-	.	ID=gene4434;Dbxref=GeneID:1099827;Name=SCD10.19c;gbkey=Gene;gene=SCD10.19c;gene_biotype=protein_coding;gene_synonym=SCD10.19c;locus_tag=SCO4387
NC_003888.3	RefSeq	CDS	4803479	4804183	.	-	0	ID=cds4339;Parent=gene4434;Dbxref=Genbank:NP_628556.1,GeneID:1099827;Name=NP_628556.1;Note=SCD10.19c%2C probable pyridoxamine oxidase%2C len: 234 aa%3B similar to SW:PDXH_ECOLI (EMBL:M92351) Escherichia coli pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) PdxH%2C 217 aa%3B fasta scores: opt: 717 z-score: 876.3 E(): 0%3B 49.1%25 identity in 212 aa overlap. Contains Pfam match to entry PF01243 Pyridox_oxidase%2C Pyridoxamine 5'-phosphate oxidase and match to Prosite entry PS01064 Pyridoxamine 5'-phosphate oxidase signature;gbkey=CDS;gene=SCD10.19c;product=pyridoxamine oxidase;protein_id=NP_628556.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4803482	4804138	.	-	.	ID=id5488;Dbxref=GeneID:1099827;Note=Pfam match to entry PF01243 Pyridox_oxidase%2C Pyridoxamine 5'-phosphate oxidase%2C score 360.50%2C E-value 1.8e-104;gbkey=misc_feature;gene=SCD10.19c
NC_003888.3	RefSeq	sequence_feature	4803536	4803577	.	-	.	ID=id5489;Dbxref=GeneID:1099827;Note=PS01064 Pyridoxamine 5'-phosphate oxidase signature;gbkey=misc_feature;gene=SCD10.19c
NC_003888.3	RefSeq	stem_loop	4804186	4804237	.	+	.	ID=id5490;Note=possible stem loop. 19767 TGCCGTACTCGTCCCGGCGCCCGG 19790 - 19795 CCGGGCACCGGACGGGTACGGCA 19818. Score 58: 22/24 (91%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4804464	4805564	.	+	.	ID=gene4435;Dbxref=GeneID:1099828;Name=SCD10.20;gbkey=Gene;gene=SCD10.20;gene_biotype=protein_coding;gene_synonym=SCD10.20;locus_tag=SCO4388
NC_003888.3	RefSeq	CDS	4804464	4805564	.	+	0	ID=cds4340;Parent=gene4435;Dbxref=Genbank:NP_628557.2,GeneID:1099828;Name=NP_628557.2;Note=forms citrate from oxaloacetate and acetyl-CoA%3B functions in TCA cycle;gbkey=CDS;gene=SCD10.20;product=citrate synthase 2;protein_id=NP_628557.2;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4804482	4804577	.	+	.	ID=id5491;Dbxref=GeneID:1099828;Note=Pfam match to entry PF00285 citrate_synt%2C Citrate synthase%2C score 19.30%2C E-value 1.9e-05;gbkey=misc_feature;gene=SCD10.20
NC_003888.3	RefSeq	sequence_feature	4804917	4805492	.	+	.	ID=id5492;Dbxref=GeneID:1099828;Note=Pfam match to entry PF00285 citrate_synt%2C Citrate synthase%2C score 183.90%2C E-value 2.9e-57;gbkey=misc_feature;gene=SCD10.20
NC_003888.3	RefSeq	sequence_feature	4805187	4805225	.	+	.	ID=id5493;Dbxref=GeneID:1099828;Note=PS00480 Citrate synthase signature;gbkey=misc_feature;gene=SCD10.20
NC_003888.3	RefSeq	gene	4805897	4806772	.	+	.	ID=gene4436;Dbxref=GeneID:1099829;Name=SCD10.21;gbkey=Gene;gene=SCD10.21;gene_biotype=protein_coding;gene_synonym=SCD10.21;locus_tag=SCO4389
NC_003888.3	RefSeq	CDS	4805897	4806772	.	+	0	ID=cds4341;Parent=gene4436;Dbxref=Genbank:NP_628558.1,GeneID:1099829;Name=NP_628558.1;Note=SCD10.21%2C possible acetyltransferase%2C len: 291 aa%3B N-terminal domain similar to TR:Q9S2T6 (EMBL:AL096884) Streptomyces coelicolor conserved hypothetical protein SC4G6.18c%2C 134 aa%3B fasta scores: opt: 259 z-score: 321.5 E(): 2e-10%3B 39.8%25 identity in 128 aa overlap and C-terminal domain similar to TR:Q9S2P7 (EMBL:AL096872) Streptomyces coelicolor acetyltransferase SC5F7.12c%2C 169 aa%3B blastp scores: Score %3D 90 (31.7 bits)%2C Expect %3D 0.043%2C P %3D 0.042 Identities %3D 37/125 (29%25)%2C Positives %3D 53/125 (42%25). Contains Pfam matches to entries PF01042 UPF0076%2C Domain of unknown function and PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCD10.21;product=acetyltransferase;protein_id=NP_628558.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4805942	4806295	.	+	.	ID=id5494;Dbxref=GeneID:1099829;Note=Pfam match to entry PF01042 UPF0076%2C Domain of unknown function%2C score 48.50%2C E-value 1.4e-10;gbkey=misc_feature;gene=SCD10.21
NC_003888.3	RefSeq	sequence_feature	4806323	4806694	.	+	.	ID=id5495;Dbxref=GeneID:1099829;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 14.70%2C E-value 0.039;gbkey=misc_feature;gene=SCD10.21
NC_003888.3	RefSeq	gene	4806938	4808341	.	+	.	ID=gene4437;Dbxref=GeneID:1099830;Name=SCD10.22;gbkey=Gene;gene=SCD10.22;gene_biotype=protein_coding;gene_synonym=SCD10.22;locus_tag=SCO4390
NC_003888.3	RefSeq	CDS	4806938	4808341	.	+	0	ID=cds4342;Parent=gene4437;Dbxref=Genbank:NP_628559.1,GeneID:1099830;Name=NP_628559.1;Note=SCD10.22%2C hypothetical protein%2C len: 467 aa%3B similar to TR:CAB92197 (EMBL:AL356592) Streptomyces coelicolor hypothetical 84.7 kD protein SC9H11.08%2C 802 aa%3B fasta scores: opt: 261 z-score: 286.0 E(): 1.9e-08%3B 29.2%25 identity in 463 aa overlap. Contains 2 Pfam matches to entry PF00989 PAS%2C PAS domain and Pfam match to entry PF00785 PAC%2C PAC motif;gbkey=CDS;gene=SCD10.22;product=hypothetical protein;protein_id=NP_628559.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4807016	4807147	.	+	.	ID=id5496;Dbxref=GeneID:1099830;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 41.30%2C E-value 7.9e-10;gbkey=misc_feature;gene=SCD10.22
NC_003888.3	RefSeq	sequence_feature	4807238	4807366	.	+	.	ID=id5497;Dbxref=GeneID:1099830;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 17.90%2C E-value 0.002;gbkey=misc_feature;gene=SCD10.22
NC_003888.3	RefSeq	sequence_feature	4807388	4807537	.	+	.	ID=id5498;Dbxref=GeneID:1099830;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 12.20%2C E-value 0.095;gbkey=misc_feature;gene=SCD10.22
NC_003888.3	RefSeq	gene	4808387	4808785	.	-	.	ID=gene4438;Dbxref=GeneID:1099831;Name=SCD10.23c;gbkey=Gene;gene=SCD10.23c;gene_biotype=protein_coding;gene_synonym=SCD10.23c;locus_tag=SCO4391
NC_003888.3	RefSeq	CDS	4808387	4808785	.	-	0	ID=cds4343;Parent=gene4438;Dbxref=Genbank:NP_628560.1,GeneID:1099831;Name=NP_628560.1;Note=SCD10.23c%2C conserved hypothetical protein%2C len: 132 aa%3B similar to TR:O86547 (EMBL:AL031350) Streptomyces coelicolor hypothetical 15.3 kD protein SC1F2.10%2C 135 aa%3B fasta scores: opt: 316 z-score: 419.7 E(): 6.7e-16%3B 45.1%25 identity in 122 aa overlap. Contains Pfam match to entry PF01638 DUF24%2C Protein of unknown function;gbkey=CDS;gene=SCD10.23c;product=hypothetical protein;protein_id=NP_628560.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4808438	4808710	.	-	.	ID=id5499;Dbxref=GeneID:1099831;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function%2C score 128.50%2C E-value 1.3e-34;gbkey=misc_feature;gene=SCD10.23c
NC_003888.3	RefSeq	ribosome_entry_site	4808790	4808795	.	-	.	ID=id5500;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4808949	4808953	.	+	.	ID=id5501;gbkey=RBS
NC_003888.3	RefSeq	gene	4808960	4809685	.	+	.	ID=gene4439;Dbxref=GeneID:1099832;Name=SCD10.24;gbkey=Gene;gene=SCD10.24;gene_biotype=protein_coding;gene_synonym=SCD10.24;locus_tag=SCO4392
NC_003888.3	RefSeq	CDS	4808960	4809685	.	+	0	ID=cds4344;Parent=gene4439;Dbxref=Genbank:NP_628561.1,GeneID:1099832;Name=NP_628561.1;Note=SCD10.24%2C possible esterase%2C len: 241 aa%3B similar to TR:Q9RBI4 (EMBL:AF150928) Acinetobacter sp. ADP1 alkyl salicylate esterase SalE%2C 239 aa%3B fasta scores: opt: 360 z-score: 411.1 E(): 2e-15%3B 28.6%25 identity in 241 aa overlap;gbkey=CDS;gene=SCD10.24;product=esterase;protein_id=NP_628561.1;transl_table=11
NC_003888.3	RefSeq	gene	4809858	4810613	.	-	.	ID=gene4440;Dbxref=GeneID:1099833;Name=SCD10.25c;gbkey=Gene;gene=SCD10.25c;gene_biotype=protein_coding;gene_synonym=SCD10.25c;locus_tag=SCO4393
NC_003888.3	RefSeq	CDS	4809858	4810613	.	-	0	ID=cds4345;Parent=gene4440;Dbxref=Genbank:NP_628562.1,GeneID:1099833;Name=NP_628562.1;Note=SCD10.25c%2C hypothetical protein%2C len: 251 aa%3B similar to SW:YFEU_ECOLI (EMBL:AE000330) Escherichia coli hypothetical 31.2 kD protein in CysP-AmiA intergenic region YfeU%2C 298 aa%3B fasta scores: opt: 147 z-score: 178.1 E(): 0.019%3B 27.0%25 identity in 185 aa overlap;gbkey=CDS;gene=SCD10.25c;product=hypothetical protein;protein_id=NP_628562.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4810825	4810828	.	+	.	ID=id5502;gbkey=RBS
NC_003888.3	RefSeq	gene	4810836	4811528	.	+	.	ID=gene4441;Dbxref=GeneID:1099834;Name=desR;gbkey=Gene;gene=desR;gene_biotype=protein_coding;gene_synonym=desR,SCD10.26;locus_tag=SCO4394
NC_003888.3	RefSeq	CDS	4810836	4811528	.	+	0	ID=cds4346;Parent=gene4441;Dbxref=Genbank:NP_628563.1,GeneID:1099834;Name=NP_628563.1;Note=SCD10.26%2C desR%2C probable iron repressor%2C len: 230 aa%3B identical to TR:Q54343 (EMBL:Z50049) Streptomyces lividans iron repressor DesR%2C 230 aa. Contains Pfam match to entry PF01325 Fe_dep_repress%2C Iron dependent repressor. Contains also a possible helix-turn-helix motif at residues 25..46 (+2.65 SD);gbkey=CDS;gene=desR;product=iron repressor;protein_id=NP_628563.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4810848	4811234	.	+	.	ID=id5503;Dbxref=GeneID:1099834;Note=Pfam match to entry PF01325 Fe_dep_repress%2C Iron dependent repressor%2C score 232.60%2C E-value 5.7e-66;gbkey=misc_feature;gene=desR
NC_003888.3	RefSeq	gene	4811888	4812946	.	+	.	ID=gene4442;Dbxref=GeneID:1099835;Name=SCD10.27;gbkey=Gene;gene=SCD10.27;gene_biotype=protein_coding;gene_synonym=SCD10.27;locus_tag=SCO4395
NC_003888.3	RefSeq	CDS	4811888	4812946	.	+	0	ID=cds4347;Parent=gene4442;Dbxref=Genbank:NP_628564.1,GeneID:1099835;Name=NP_628564.1;Note=SCD10.27%2C possible hydrolase%2C len: 352 aa%3B similar to TR:Q9RCX1 (EMBL:AL133469) Streptomyces coelicolor hydrolase SCM10.27c%2C 287 aa%3B fasta scores: opt: 290 z-score: 298.8 E(): 3.6e-09%3B 28.5%25 identity in 277 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SCD10.27;product=hydrolase;protein_id=NP_628564.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4812194	4812196	.	+	.	ID=id5504;Dbxref=GeneID:1099835;Note=TTA leucine codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCD10.27
NC_003888.3	RefSeq	sequence_feature	4812260	4812925	.	+	.	ID=id5505;Dbxref=GeneID:1099835;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 92.30%2C E-value 1e-23;gbkey=misc_feature;gene=SCD10.27
NC_003888.3	RefSeq	gene	4812954	4814606	.	-	.	ID=gene4443;Dbxref=GeneID:1099836;Name=SCD10.28c;gbkey=Gene;gene=SCD10.28c;gene_biotype=protein_coding;gene_synonym=SCD10.28c;locus_tag=SCO4396
NC_003888.3	RefSeq	CDS	4812954	4814606	.	-	0	ID=cds4348;Parent=gene4443;Dbxref=Genbank:NP_628565.1,GeneID:1099836;Name=NP_628565.1;Note=SCD10.28c%2C possible integral membrane transport protein%2C len: 550 aa%3B similar to SW:MER4_STRLI (EMBL:X65467) Streptomyces lividans mercury resistance probable Hg transport protein Mer4%2C 319 aa%3B fasta scores: opt: 139 z-score: 153.9 E(): 0.43%3B 27.9%25 identity in 308 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD10.28c;product=integral membrane transport protein;protein_id=NP_628565.1;transl_table=11
NC_003888.3	RefSeq	gene	4814603	4815394	.	-	.	ID=gene4444;Dbxref=GeneID:1099837;Name=SCD10.29c;gbkey=Gene;gene=SCD10.29c;gene_biotype=protein_coding;gene_synonym=SCD10.29c;locus_tag=SCO4397
NC_003888.3	RefSeq	CDS	4814603	4815394	.	-	0	ID=cds4349;Parent=gene4444;Dbxref=Genbank:NP_628566.1,GeneID:1099837;Name=NP_628566.1;Note=SCD10.29c%2C probable ABC transport system ATP-binding protein%2C len: 263 aa%3B similar to TR:Q9WZQ0 (EMBL:AE001747) Thermotoga maritima ABC transporter ATP-binding protein TM0793%2C 260 aa%3B fasta scores: opt: 591 z-score: 670.1 E(): 7.6e-30%3B 36.9%25 identity in 244 aa overlap and to SW:DRRA_STRPE (EMBL:M73758) Streptomyces peucetius daunorubicin resistance ATP-binding protein DrrA%2C 330 aa%3B fasta scores: opt: 551 z-score: 623.8 E(): 2.8e-27%3B 39.1%25 identity in 225 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD10.29c;product=ABC transporter ATP-binding protein;protein_id=NP_628566.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4814741	4815286	.	-	.	ID=id5506;Dbxref=GeneID:1099837;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 186.20%2C E-value 5.1e-52;gbkey=misc_feature;gene=SCD10.29c
NC_003888.3	RefSeq	sequence_feature	4815242	4815265	.	-	.	ID=id5507;Dbxref=GeneID:1099837;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD10.29c
NC_003888.3	RefSeq	gene	4815510	4816163	.	-	.	ID=gene4445;Dbxref=GeneID:1099838;Name=SCD10.30c;gbkey=Gene;gene=SCD10.30c;gene_biotype=protein_coding;gene_synonym=SCD10.30c;locus_tag=SCO4398
NC_003888.3	RefSeq	CDS	4815510	4816163	.	-	0	ID=cds4350;Parent=gene4445;Dbxref=Genbank:NP_628567.1,GeneID:1099838;Name=NP_628567.1;Note=SCD10.30c%2C conserved hypothetical protein%2C len: 217 aa%3B similar to TR:Q9ZBP8 (EMBL:AL034447) Streptomyces coelicolor hypothetical 23.3 kD protein SC7A1.25c%2C 223 aa%3B fasta scores: opt: 514 z-score: 621.6 E(): 3.8e-27%3B 45.0%25 identity in 189 aa overlap;gbkey=CDS;gene=SCD10.30c;product=hypothetical protein;protein_id=NP_628567.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4816175	4816178	.	-	.	ID=id5508;gbkey=RBS
NC_003888.3	RefSeq	gene	4816468	4817853	.	+	.	ID=gene4446;Dbxref=GeneID:1099839;Name=SCD10.31;gbkey=Gene;gene=SCD10.31;gene_biotype=protein_coding;gene_synonym=SCD10.31;locus_tag=SCO4399
NC_003888.3	RefSeq	CDS	4816468	4817853	.	+	0	ID=cds4351;Parent=gene4446;Dbxref=Genbank:NP_628568.1,GeneID:1099839;Name=NP_628568.1;Note=SCD10.31%2C conserved hypothetical protein%2C len: 461 aa%3B similar to TR:Q53958 (EMBL:M80614) Streptomyces coelicolor sporulation-associated protein genes%2C complete CDS%2C 473 aa%3B fasta scores: opt: 666 z-score: 723.4 E(): 8.1e-33%3B 43.8%25 identity in 464 aa overlap;gbkey=CDS;gene=SCD10.31;product=hypothetical protein;protein_id=NP_628568.1;transl_table=11
NC_003888.3	RefSeq	gene	4818113	4819708	.	+	.	ID=gene4447;Dbxref=GeneID:1099840;Name=SCD10.32;gbkey=Gene;gene=SCD10.32;gene_biotype=protein_coding;gene_synonym=SCD10.32;locus_tag=SCO4400
NC_003888.3	RefSeq	CDS	4818113	4819708	.	+	0	ID=cds4352;Parent=gene4447;Dbxref=Genbank:NP_628569.1,GeneID:1099840;Name=NP_628569.1;Note=SCD10.32%2C possible membrane protein%2C len: 531 aa. Contains possible hydrophobic membrane spanning region and high content in alanine%2C glycine and proline amino acid residues. Also high G+C content (79.03%25) and a 3x degenerate repeat unit: GGR;gbkey=CDS;gene=SCD10.32;product=hypothetical protein;protein_id=NP_628569.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4819052	4819078	.	+	.	ID=id5509;Dbxref=GeneID:1099840;Note=3x repeat unit translated in SCD10.32;gbkey=repeat_region;gene=SCD10.32
NC_003888.3	RefSeq	gene	4819767	4821083	.	-	.	ID=gene4448;Dbxref=GeneID:1099841;Name=SCD10.33c;gbkey=Gene;gene=SCD10.33c;gene_biotype=protein_coding;gene_synonym=SCD10.33c;locus_tag=SCO4401
NC_003888.3	RefSeq	CDS	4819767	4821083	.	-	0	ID=cds4353;Parent=gene4448;Dbxref=Genbank:NP_628570.1,GeneID:1099841;Name=NP_628570.1;Note=SCD10.33c%2C possible lipoprotein%2C len: 438 aa%3B N-terminal domain similar to N-terminal domain of TR:O68027 (EMBL:AF010496) Rhodobacter capsulatus potential Leu/Ile/Val-binding protein precursor%2C 400 aa%3B fasta scores: opt: 151 z-score: 166.0 E(): 0.09%3B 29.8%25 identity in 131 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD10.33c;product=lipoprotein;protein_id=NP_628570.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4820979	4821011	.	-	.	ID=id5510;Dbxref=GeneID:1099841;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD10.33c
NC_003888.3	RefSeq	gene	4821200	4821700	.	+	.	ID=gene4449;Dbxref=GeneID:1099842;Name=SCD10.34;gbkey=Gene;gene=SCD10.34;gene_biotype=protein_coding;gene_synonym=SCD10.34;locus_tag=SCO4402
NC_003888.3	RefSeq	CDS	4821200	4821700	.	+	0	ID=cds4354;Parent=gene4449;Dbxref=Genbank:NP_628571.1,GeneID:1099842;Name=NP_628571.1;Note=SCD10.34%2C unknown%2C len: 166 aa;gbkey=CDS;gene=SCD10.34;product=hypothetical protein;protein_id=NP_628571.1;transl_table=11
NC_003888.3	RefSeq	gene	4821748	4822641	.	+	.	ID=gene4450;Dbxref=GeneID:1099843;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;gene_synonym=SC6F11.01,SCD10.35;locus_tag=SCO4403
NC_003888.3	RefSeq	CDS	4821748	4822641	.	+	0	ID=cds4355;Parent=gene4450;Dbxref=Genbank:NP_733636.1,GeneID:1099843;Name=NP_733636.1;Note=produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis%3B has a role in one-carbon metabolism%3B forms a homohexamer%3B activated by methionine and inhibited by glycine;gbkey=CDS;gene=purU;product=formyltetrahydrofolate deformylase;protein_id=NP_733636.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4822048	4822350	.	+	.	ID=id5511;Dbxref=GeneID:1099843;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 47.40%2C E-value 1.7e-12;gbkey=misc_feature;gene=purU
NC_003888.3	RefSeq	sequence_feature	4822261	4822581	.	+	.	ID=id5512;Dbxref=GeneID:1099843;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 114.30%2C E-value 8.9e-32;gbkey=misc_feature;gene=purU
NC_003888.3	RefSeq	gene	4822683	4823471	.	-	.	ID=gene4451;Dbxref=GeneID:1099844;Name=SC6F11.02c;gbkey=Gene;gene=SC6F11.02c;gene_biotype=protein_coding;gene_synonym=SC6F11.02c;locus_tag=SCO4404
NC_003888.3	RefSeq	CDS	4822683	4823471	.	-	0	ID=cds4356;Parent=gene4451;Dbxref=Genbank:NP_628572.1,GeneID:1099844;Name=NP_628572.1;Note=SC6F11.02c%2C probable ABC transport system integral membrane protein%2C len: 262 aa%3B similar to TR:BAB07697 (EMBL:AP001520) Bacillus halodurans ABC transporter (permease) BH3978%2C 249 aa%3B fasta scores: opt: 669 z-score: 757.4 E(): 0%3B 41.7%25 identity in 247 aa overlap. Contains Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6F11.02c;product=ABC transporter;protein_id=NP_628572.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4822695	4823426	.	-	.	ID=id5513;Dbxref=GeneID:1099844;Note=Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter%2C score -50.00%2C E-value 0.0011;gbkey=misc_feature;gene=SC6F11.02c
NC_003888.3	RefSeq	gene	4823468	4824442	.	-	.	ID=gene4452;Dbxref=GeneID:1099845;Name=SC6F11.03c;gbkey=Gene;gene=SC6F11.03c;gene_biotype=protein_coding;gene_synonym=SC6F11.03c;locus_tag=SCO4405
NC_003888.3	RefSeq	CDS	4823468	4824442	.	-	0	ID=cds4357;Parent=gene4452;Dbxref=Genbank:NP_628573.1,GeneID:1099845;Name=NP_628573.1;Note=SC6F11.03c%2C probable ABC transport system ATP-binding protein%2C len: 324 aa%3B similar to SW:DRRA_STRPE (EMBL:M73758) Streptomyces peucetius daunorubicin resistance ATP-binding protein DrrA%2C 330 aa%3B fasta scores: opt: 857 z-score: 908.1 E(): 0%3B 45.3%25 identity in 322 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC6F11.03c;product=ABC transporter ATP-binding protein;protein_id=NP_628573.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4823480	4823483	.	-	.	ID=id5514;Dbxref=GeneID:1099845;gbkey=RBS;gene=SC6F11.03c
NC_003888.3	RefSeq	sequence_feature	4823807	4824352	.	-	.	ID=id5515;Dbxref=GeneID:1099845;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 189.20%2C E-value 6.3e-53;gbkey=misc_feature;gene=SC6F11.03c
NC_003888.3	RefSeq	sequence_feature	4823990	4824034	.	-	.	ID=id5516;Dbxref=GeneID:1099845;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC6F11.03c
NC_003888.3	RefSeq	sequence_feature	4824308	4824331	.	-	.	ID=id5517;Dbxref=GeneID:1099845;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6F11.03c
NC_003888.3	RefSeq	ribosome_entry_site	4824451	4824455	.	-	.	ID=id5518;gbkey=RBS
NC_003888.3	RefSeq	gene	4824455	4825120	.	-	.	ID=gene4453;Dbxref=GeneID:1099846;Name=SC6F11.04c;gbkey=Gene;gene=SC6F11.04c;gene_biotype=protein_coding;gene_synonym=SC6F11.04c;locus_tag=SCO4406
NC_003888.3	RefSeq	CDS	4824455	4825120	.	-	0	ID=cds4358;Parent=gene4453;Dbxref=Genbank:NP_628574.1,GeneID:1099846;Name=NP_628574.1;Note=SC6F11.04c%2C unknown%2C len: 21 aa;gbkey=CDS;gene=SC6F11.04c;product=hypothetical protein;protein_id=NP_628574.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4825127	4825130	.	-	.	ID=id5519;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4825340	4825345	.	+	.	ID=id5520;gbkey=RBS
NC_003888.3	RefSeq	gene	4825352	4826125	.	+	.	ID=gene4454;Dbxref=GeneID:1099847;Name=SC6F11.05;gbkey=Gene;gene=SC6F11.05;gene_biotype=protein_coding;gene_synonym=SC6F11.05;locus_tag=SCO4407
NC_003888.3	RefSeq	CDS	4825352	4826125	.	+	0	ID=cds4359;Parent=gene4454;Dbxref=Genbank:NP_628575.1,GeneID:1099847;Name=NP_628575.1;Note=SC6F11.05%2C hypothetical protein%2C len: 257 aa%3B partially similar to TR:Q9X8P9 (EMBL:AL049754) Streptomyces coelicolor hypothetical 17.1 kDa protein SCH10.10c%2C 152 aa%3B fasta scores: opt: 314 z-score: 367.2 E(): 6e-13 40.4%25 identity in 141 aa overlap;gbkey=CDS;gene=SC6F11.05;product=hypothetical protein;protein_id=NP_628575.1;transl_table=11
NC_003888.3	RefSeq	gene	4826082	4827368	.	-	.	ID=gene4455;Dbxref=GeneID:1099848;Name=SC6F11.06c;gbkey=Gene;gene=SC6F11.06c;gene_biotype=protein_coding;gene_synonym=SC6F11.06c;locus_tag=SCO4408
NC_003888.3	RefSeq	CDS	4826082	4827368	.	-	0	ID=cds4360;Parent=gene4455;Dbxref=Genbank:NP_628576.1,GeneID:1099848;Name=NP_628576.1;Note=SC6F11.06c%2C unknown%2C len: 428 aa. Contains 4x degenerate repeat unit: (G/T)GTG;gbkey=CDS;gene=SC6F11.06c;product=hypothetical protein;protein_id=NP_628576.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4827258	4827305	.	-	.	ID=id5521;Dbxref=GeneID:1099848;Note=4x degenerate repeat translated in SC6F11.06c;gbkey=repeat_region;gene=SC6F11.06c
NC_003888.3	RefSeq	gene	4827365	4827958	.	-	.	ID=gene4456;Dbxref=GeneID:1099849;Name=SC6F11.07c;gbkey=Gene;gene=SC6F11.07c;gene_biotype=protein_coding;gene_synonym=SC6F11.07c;locus_tag=SCO4409
NC_003888.3	RefSeq	CDS	4827365	4827958	.	-	0	ID=cds4361;Parent=gene4456;Dbxref=Genbank:NP_628577.1,GeneID:1099849;Name=NP_628577.1;Note=SC6F11.07c%2C possible RNA polymerase sigma factor%2C len: 197 aa%3B similar to SW:SIGZ_BACSU (EMBL:U93875) Bacillus subtilis RNA polymerase sigma factor SigZ%2C 176 aa%3B fasta scores: opt: 166 z-score: 208.5 E(): 0.00041%3B 27.0%25 identity in 148 aa overlap;gbkey=CDS;gene=SC6F11.07c;product=RNA polymerase sigma factor;protein_id=NP_628577.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4827965	4827969	.	-	.	ID=id5522;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4828276	4828279	.	+	.	ID=id5523;gbkey=RBS
NC_003888.3	RefSeq	gene	4828287	4828667	.	+	.	ID=gene4457;Dbxref=GeneID:1099850;Name=SC6F11.08;gbkey=Gene;gene=SC6F11.08;gene_biotype=protein_coding;gene_synonym=SC6F11.08;locus_tag=SCO4410
NC_003888.3	RefSeq	CDS	4828287	4828667	.	+	0	ID=cds4362;Parent=gene4457;Dbxref=Genbank:NP_628578.1,GeneID:1099850;Name=NP_628578.1;Note=SC6F11.08%2C possible anti anti sigma factor%2C len: 126 aa%3B similar to SW:RSBV_STRCO (EMBL:AF134889) Streptomyces coelicolor anti-sigma B factor antagonist BldG%2C 113 aa%3B fasta scores: opt: 195 z-score: 264.4 E(): 3.2e-07%3B 30.8%25 identity in 104 aa overlap. Contains Pfam match to entry PF01740 STAS%2C STAS domain;gbkey=CDS;gene=SC6F11.08;product=anti anti sigma factor;protein_id=NP_628578.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4828302	4828634	.	+	.	ID=id5524;Dbxref=GeneID:1099850;Note=Pfam match to entry PF01740 STAS%2C STAS domain%2C score 45.00%2C E-value 1.6e-09;gbkey=misc_feature;gene=SC6F11.08
NC_003888.3	RefSeq	gene	4828773	4829285	.	+	.	ID=gene4458;Dbxref=GeneID:1099851;Name=SC6F11.09;gbkey=Gene;gene=SC6F11.09;gene_biotype=protein_coding;gene_synonym=SC6F11.09;locus_tag=SCO4411
NC_003888.3	RefSeq	CDS	4828773	4829285	.	+	0	ID=cds4363;Parent=gene4458;Dbxref=Genbank:NP_628579.1,GeneID:1099851;Name=NP_628579.1;Note=SC6F11.09%2C probable calcium binding protein%2C len: 170 aa%3B similar to SW:CBP_SACER (EMBL:M29700) Saccharopolyspora erythraea calerythrin (calcium-binding protein)%2C 177 aa%3B fasta scores: opt: 229 z-score: 267.7 E(): 2.1e-07%3B 28.6%25 identity in 154 aa overlap. Contains 4x Pfam matches to entry PF00036 efhand%2C EF hand and 3x matches to Prosite entry PS00018 EF-hand calcium-binding domain;gbkey=CDS;gene=SC6F11.09;product=calcium binding protein;protein_id=NP_628579.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4828797	4828883	.	+	.	ID=id5525;Dbxref=GeneID:1099851;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 15.50%2C E-value 0.23;gbkey=misc_feature;gene=SC6F11.09
NC_003888.3	RefSeq	sequence_feature	4828824	4828862	.	+	.	ID=id5526;Dbxref=GeneID:1099851;Note=PS00018 EF-hand calcium-binding domain;gbkey=misc_feature;gene=SC6F11.09
NC_003888.3	RefSeq	sequence_feature	4828950	4829036	.	+	.	ID=id5527;Dbxref=GeneID:1099851;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 3.60%2C E-value 6.1;gbkey=misc_feature;gene=SC6F11.09
NC_003888.3	RefSeq	sequence_feature	4828977	4829015	.	+	.	ID=id5528;Dbxref=GeneID:1099851;Note=PS00018 EF-hand calcium-binding domain;gbkey=misc_feature;gene=SC6F11.09
NC_003888.3	RefSeq	sequence_feature	4829079	4829165	.	+	.	ID=id5529;Dbxref=GeneID:1099851;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 1.90%2C E-value 9.8;gbkey=misc_feature;gene=SC6F11.09
NC_003888.3	RefSeq	sequence_feature	4829181	4829267	.	+	.	ID=id5530;Dbxref=GeneID:1099851;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 2.20%2C E-value 9;gbkey=misc_feature;gene=SC6F11.09
NC_003888.3	RefSeq	sequence_feature	4829208	4829246	.	+	.	ID=id5531;Dbxref=GeneID:1099851;Note=PS00018 EF-hand calcium-binding domain;gbkey=misc_feature;gene=SC6F11.09
NC_003888.3	RefSeq	repeat_region	4829293	4829305	.	+	.	ID=id5532;Note=degenerated repeat unit%2C RU1: x3 CCGGAGCAGCG(T/A/C)C;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4829323	4829335	.	+	.	ID=id5533;Note=RU1;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4829330	4829340	.	+	.	ID=id5534;Note=degenerated repeat unit%2C RU2: 3x (A/G)GCGCCCGCCG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4829345	4829355	.	+	.	ID=id5535;Note=RU2;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4829368	4829381	.	+	.	ID=id5536;Note=RU1;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	4829390	4829400	.	+	.	ID=id5537;Note=RU2;gbkey=repeat_region
NC_003888.3	RefSeq	gene	4829856	4830347	.	+	.	ID=gene4459;Dbxref=GeneID:1099852;Name=SC6F11.10;gbkey=Gene;gene=SC6F11.10;gene_biotype=protein_coding;gene_synonym=SC6F11.10;locus_tag=SCO4412
NC_003888.3	RefSeq	CDS	4829856	4830347	.	+	0	ID=cds4364;Parent=gene4459;Dbxref=Genbank:NP_628580.1,GeneID:1099852;Name=NP_628580.1;Note=SC6F11.10%2C possible regulatory protein%2C len: 163 aa%3B similar to TR:Q9ZBT2 (EMBL:AL034446) Streptomyces coelicolor  regulatory protein SC1A9.20%2C 135 aa%3B fasta scores: opt: 227 z-score: 286.6 E(): 1.8e-08%3B 43.0%25 identity in 135 aa overlap;gbkey=CDS;gene=SC6F11.10;product=regulatory protein;protein_id=NP_628580.1;transl_table=11
NC_003888.3	RefSeq	gene	4830650	4831684	.	-	.	ID=gene4460;Dbxref=GeneID:1099853;Name=SC6F11.11c;gbkey=Gene;gene=SC6F11.11c;gene_biotype=protein_coding;gene_synonym=SC6F11.11c;locus_tag=SCO4413
NC_003888.3	RefSeq	CDS	4830650	4831684	.	-	0	ID=cds4365;Parent=gene4460;Dbxref=Genbank:NP_628581.1,GeneID:1099853;Name=NP_628581.1;Note=SC6F11.11c%2C probable araC family transcriptional regulatory protein%2C len: 344 aa%3B highly similar to TR:Q9S166 (EMBL:AB023785) Streptomyces griseus AdpA%2C 405 aa%3B fasta scores: opt: 881 z-score: 1024.1 E(): 0%3B 46.9%25 identity in 322 aa overlap and to TR:CAB70646 (EMBL:AL137242) Streptomyces coelicolor transcriptional regulator SC8F4.20c%2C 337 aa%3B fasta scores: opt: 1237 z-score: 1238.7 E(): 0%3B 60.3%25 identity in 325 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and a possible helix-turn-helix motif at residues 249..270 (+2.55 SD);gbkey=CDS;gene=SC6F11.11c;product=AraC family transcription regulator;protein_id=NP_628581.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4830683	4830943	.	-	.	ID=id5538;Dbxref=GeneID:1099853;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 74.90%2C E-value 1.6e-18;gbkey=misc_feature;gene=SC6F11.11c
NC_003888.3	RefSeq	ribosome_entry_site	4831755	4831758	.	+	.	ID=id5539;gbkey=RBS
NC_003888.3	RefSeq	gene	4831769	4833094	.	+	.	ID=gene4461;Dbxref=GeneID:1099854;Name=SC6F11.12;gbkey=Gene;gene=SC6F11.12;gene_biotype=protein_coding;gene_synonym=SC6F11.12;locus_tag=SCO4414
NC_003888.3	RefSeq	CDS	4831769	4833094	.	+	0	ID=cds4366;Parent=gene4461;Dbxref=Genbank:NP_628582.1,GeneID:1099854;Name=NP_628582.1;Note=SC6F11.12%2C possible integral membrane protein%2C len: 441 aa%3B similar to TR:BAB06413 (EMBL:AP001516) Bacillus halodurans transporter BH2694%2C 418 aa%3B fasta scores: opt: 795 z-score: 909.8 E(): 0%3B 31.0%25 identity in 413 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6F11.12;product=integral membrane transport protein;protein_id=NP_628582.1;transl_table=11
NC_003888.3	RefSeq	gene	4833116	4833988	.	+	.	ID=gene4462;Dbxref=GeneID:1099855;Name=SC6F11.13;gbkey=Gene;gene=SC6F11.13;gene_biotype=protein_coding;gene_synonym=SC6F11.13;locus_tag=SCO4415
NC_003888.3	RefSeq	CDS	4833116	4833988	.	+	0	ID=cds4367;Parent=gene4462;Dbxref=Genbank:NP_628583.1,GeneID:1099855;Name=NP_628583.1;Note=SC6F11.13%2C possible integral membrane protein%2C len: 290 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6F11.13;product=hypothetical protein;protein_id=NP_628583.1;transl_table=11
NC_003888.3	RefSeq	gene	4834171	4835376	.	-	.	ID=gene4463;Dbxref=GeneID:1099856;Name=SC6F11.14c;gbkey=Gene;gene=SC6F11.14c;gene_biotype=protein_coding;gene_synonym=SC6F11.14c;locus_tag=SCO4416
NC_003888.3	RefSeq	CDS	4834171	4835376	.	-	0	ID=cds4368;Parent=gene4463;Dbxref=Genbank:NP_628584.1,GeneID:1099856;Name=NP_628584.1;Note=SC6F11.14c%2C probable monooxygenase%2C len: 401 aa%3B similar to TR:Q9SDE6 (EMBL:AP000837) Oryza sativa similar to human dimethylanilyne monooxygenase%2C 437 aa%3B fasta scores: opt: 692 z-score: 722.8 E(): 9.3e-33%3B 38.2%25 identity in 403 aa overlap. Contains Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like;gbkey=CDS;gene=SC6F11.14c;product=monooxygenase;protein_id=NP_628584.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4834204	4835325	.	-	.	ID=id5540;Dbxref=GeneID:1099856;Note=Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like%2C score -255.00%2C E-value 8.8e-09;gbkey=misc_feature;gene=SC6F11.14c
NC_003888.3	RefSeq	gene	4835476	4836093	.	+	.	ID=gene4464;Dbxref=GeneID:1099857;Name=SC6F11.15;gbkey=Gene;gene=SC6F11.15;gene_biotype=protein_coding;gene_synonym=SC6F11.15;locus_tag=SCO4417
NC_003888.3	RefSeq	CDS	4835476	4836093	.	+	0	ID=cds4369;Parent=gene4464;Dbxref=Genbank:NP_628585.1,GeneID:1099857;Name=NP_628585.1;Note=SC6F11.15%2C probable acetyltransferase%2C len: 205 aa%3B similar to SW:RIML_ECOLI (EMBL:X15860) Escherichia coli ribosomal-protein-serine acetyltransferase (EC 2.3.1.-) RimL%2C 179 aa%3B fasta scores: opt: 199 z-score: 261.1 E(): 4.8e-07%3B 30.6%25 identity in 157 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC6F11.15;product=acetyltransferase;protein_id=NP_628585.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4835740	4835973	.	+	.	ID=id5541;Dbxref=GeneID:1099857;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 42.00%2C E-value 1.3e-08;gbkey=misc_feature;gene=SC6F11.15
NC_003888.3	RefSeq	gene	4836101	4836769	.	-	.	ID=gene4465;Dbxref=GeneID:1099858;Name=SC6F11.16c;gbkey=Gene;gene=SC6F11.16c;gene_biotype=protein_coding;gene_synonym=SC6F11.16c;locus_tag=SCO4418
NC_003888.3	RefSeq	CDS	4836101	4836769	.	-	0	ID=cds4370;Parent=gene4465;Dbxref=Genbank:NP_628586.1,GeneID:1099858;Name=NP_628586.1;Note=SC6F11.16c%2C probable oxidase%2C len: 222 aa%3B similar to TR:O88794 (EMBL:U91561) Rattus norvegicus pyridoxine 5'-phosphate oxidase PnpO%2C 261 aa%3B fasta scores: opt: 413 z-score: 479.7 E(): 3.2e-19%3B 38.0%25 identity in 184 aa overlap. Contains Pfam match to entry PF01243 Pyridox_oxidase%2C Pyridoxamine 5'-phosphate oxidase;gbkey=CDS;gene=SC6F11.16c;product=oxidase;protein_id=NP_628586.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4836104	4836769	.	-	.	ID=id5542;Dbxref=GeneID:1099858;Note=Pfam match to entry PF01243 Pyridox_oxidase%2C Pyridoxamine 5'-phosphate oxidase%2C score 116.40%2C E-value 5.5e-31;gbkey=misc_feature;gene=SC6F11.16c
NC_003888.3	RefSeq	gene	4836783	4837208	.	-	.	ID=gene4466;Dbxref=GeneID:1099859;Name=SC6F11.17c;gbkey=Gene;gene=SC6F11.17c;gene_biotype=protein_coding;gene_synonym=SC6F11.17c;locus_tag=SCO4419
NC_003888.3	RefSeq	CDS	4836783	4837208	.	-	0	ID=cds4371;Parent=gene4466;Dbxref=Genbank:NP_628587.1,GeneID:1099859;Name=NP_628587.1;Note=SC6F11.17c%2C conserved hypothetical protein%2C len: 141 aa%3B similar to TR:O52559 (EMBL:AF040570) Amycolatopsis mediterranei hypothetical 18.7 kDa protein%2C 166 aa%3B fasta scores: opt: 372 z-score: 489.5 E(): 9.3e-20%3B 44.3%25 identity in 140 aa overlap;gbkey=CDS;gene=SC6F11.17c;product=hypothetical protein;protein_id=NP_628587.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4837214	4837218	.	-	.	ID=id5543;gbkey=RBS
NC_003888.3	RefSeq	gene	4837226	4837537	.	+	.	ID=gene4467;Dbxref=GeneID:1099860;Name=SC6F11.18;gbkey=Gene;gene=SC6F11.18;gene_biotype=protein_coding;gene_synonym=SC6F11.18;locus_tag=SCO4420
NC_003888.3	RefSeq	CDS	4837226	4837537	.	+	0	ID=cds4372;Parent=gene4467;Dbxref=Genbank:NP_628588.1,GeneID:1099860;Name=NP_628588.1;Note=SC6F11.18%2C unknown%2C len: 103 aa. Contains 6x conserved repeat: MR;gbkey=CDS;gene=SC6F11.18;product=hypothetical protein;protein_id=NP_628588.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4837226	4837261	.	+	.	ID=id5544;Dbxref=GeneID:1099860;Note=6x conserved repeat translated in SC6F11.18;gbkey=repeat_region;gene=SC6F11.18
NC_003888.3	RefSeq	gene	4837557	4838192	.	-	.	ID=gene4468;Dbxref=GeneID:1099861;Name=SC6F11.19c;gbkey=Gene;gene=SC6F11.19c;gene_biotype=protein_coding;gene_synonym=SC6F11.19c;locus_tag=SCO4421
NC_003888.3	RefSeq	CDS	4837557	4838192	.	-	0	ID=cds4373;Parent=gene4468;Dbxref=Genbank:NP_628589.1,GeneID:1099861;Name=NP_628589.1;Note=SC6F11.19c%2C possible tetR-family transcriptional regulatory protein%2C len: 211 aa%3B similar to TR:Q9RD77 (EMBL:AL136502) Streptomyces coelicolor tetR-family regulatory protein SCF43.11c%2C 205 aa%3B fasta scores: opt: 156 z-score: 196.9 E(): 0.0018%3B 28.2%25 identity in 131 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif at residues 36..57 (+4.34 SD);gbkey=CDS;gene=SC6F11.19c;product=TetR family transcriptional regulator;protein_id=NP_628589.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4837995	4838135	.	-	.	ID=id5545;Dbxref=GeneID:1099861;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 30.20%2C E-value 4.1e-06;gbkey=misc_feature;gene=SC6F11.19c
NC_003888.3	RefSeq	ribosome_entry_site	4838196	4838200	.	-	.	ID=id5546;gbkey=RBS
NC_003888.3	RefSeq	gene	4838327	4839085	.	+	.	ID=gene4469;Dbxref=GeneID:1099862;Name=SC6F11.20;gbkey=Gene;gene=SC6F11.20;gene_biotype=protein_coding;gene_synonym=SC6F11.20;locus_tag=SCO4422
NC_003888.3	RefSeq	CDS	4838327	4839085	.	+	0	ID=cds4374;Parent=gene4469;Dbxref=Genbank:NP_628590.1,GeneID:1099862;Name=NP_628590.1;Note=SC6F11.20%2C possible hydrolase%2C len: 252 aa%3B similar to TR:Q9X7R7 (EMBL:AL049863) Streptomyces coelicolor hydrolase SC5H1.09c%2C 265 aa%3B fasta scores: opt: 465 z-score: 555.8 E(): 1.9e-23%3B 40.1%25 identity in 252 aa overlap;gbkey=CDS;gene=SC6F11.20;product=hydrolase;protein_id=NP_628590.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4839021	4839787	.	+	.	ID=id5547;Note=previously sequenced DNA fragment. EMBL:D15062 Streptomyces coelicolor afsK gene. Fragment;end_range=4839787,.;gbkey=misc_feature;partial=true
NC_003888.3	RefSeq	ribosome_entry_site	4839289	4839295	.	+	.	ID=id5548;gbkey=RBS
NC_003888.3	RefSeq	gene	4839304	4841703	.	+	.	ID=gene4470;Dbxref=GeneID:1099863;Name=afsK;gbkey=Gene;gene=afsK;gene_biotype=protein_coding;gene_synonym=afsK,SC6F11.21,SCD6.01;locus_tag=SCO4423
NC_003888.3	RefSeq	CDS	4839304	4841703	.	+	0	ID=cds4375;Parent=gene4470;Dbxref=Genbank:NP_733637.1,GeneID:1099863;Name=NP_733637.1;Note=SC6F11.21%2C afsK%2C Ser/Thr protein kinase%2C len: >161 aa%3B identical to N-terminal region of previously sequenced SW:AFSK_STRCO (EMBL:D15062) Streptomyces coelicolor Ser/Thr protein kinase AfsK%2C 799 aa. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and match to Prosite entry PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature~SCD6.01%2C afsK%2C Ser/Thr protein kinase%2C len: >671 aa%3B identical to C-terminal region of SW:AFSK_STRCO (EMBL:D15062) Streptomyces coelicolor Ser/Thr protein kinase AfsK%2C 799 aa and highly similar to the C-terminal region of TR:CAB45488 Streptomyces coelicolor Ser/Thr protein kinase SC66T3.32c%2C 783 aa%3B fasta scores: opt: 521 z-score: 329.5 E(): 7.7e-13%3B 40.6%25 identity in 266 aa overlap. Contains Pfam matches to entries PF00069 pkinase%2C Eukaryotic protein kinase domain and 8x PF01011 Bacterial_PQQ%2C PQQ enzyme repeat and match to Prosite entry PS00108 Ser/Thr protein kinases active-site signature;gbkey=CDS;gene=afsK;product=Ser/Thr protein kinase;protein_id=NP_733637.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4839349	4839780	.	+	.	ID=id5549;Dbxref=GeneID:1099863;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 67.90%2C E-value 9.4e-18;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4839367	4839435	.	+	.	ID=id5550;Dbxref=GeneID:1099863;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4839686	4842591	.	+	.	ID=id5551;Note=previously sequenced fragment EMBL:D45382 Streptomyces coelicolor genes for afsKC (protein Ser/Thr kinase)%2C orfB and afsS%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	4839688	4840086	.	+	.	ID=id5552;Dbxref=GeneID:1099863;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 78.10%2C E-value 1.4e-20;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4839703	4839741	.	+	.	ID=id5553;Dbxref=GeneID:1099863;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4840639	4840740	.	+	.	ID=id5554;Dbxref=GeneID:1099863;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 6.00%2C E-value 11;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4840744	4840854	.	+	.	ID=id5555;Dbxref=GeneID:1099863;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 22.40%2C E-value 0.011;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4840858	4840971	.	+	.	ID=id5556;Dbxref=GeneID:1099863;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 1.40%2C E-value 55;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4840990	4841100	.	+	.	ID=id5557;Dbxref=GeneID:1099863;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 31.50%2C E-value 2e-05;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4841125	4841235	.	+	.	ID=id5558;Dbxref=GeneID:1099863;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 17.40%2C E-value 0.23;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4841260	4841373	.	+	.	ID=id5559;Dbxref=GeneID:1099863;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 33.20%2C E-value 6.2e-06;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4841383	4841493	.	+	.	ID=id5560;Dbxref=GeneID:1099863;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 27.60%2C E-value 0.00029;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	sequence_feature	4841500	4841613	.	+	.	ID=id5561;Dbxref=GeneID:1099863;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 18.60%2C E-value 0.14;gbkey=misc_feature;gene=afsK
NC_003888.3	RefSeq	gene	4841760	4842290	.	+	.	ID=gene4471;Dbxref=GeneID:1099864;Name=SCD6.02;gbkey=Gene;gene=SCD6.02;gene_biotype=protein_coding;gene_synonym=SCD6.02;locus_tag=SCO4424
NC_003888.3	RefSeq	CDS	4841760	4842290	.	+	0	ID=cds4376;Parent=gene4471;Dbxref=Genbank:NP_628591.1,GeneID:1099864;Name=NP_628591.1;Note=SCD6.02%2C possible hypothetical protein%2C len: 176 aa%3B almost identical to TR:Q53910 (EMBL:D45382) Streptomyces coelicolor ORFB%2C 175 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD6.02;product=hypothetical protein;protein_id=NP_628591.1;transl_table=11
NC_003888.3	RefSeq	gene	4842382	4842573	.	-	.	ID=gene4472;Dbxref=GeneID:1099865;Name=afsR2;gbkey=Gene;gene=afsR2;gene_biotype=protein_coding;gene_synonym=afsR2,SCD6.03c;locus_tag=SCO4425
NC_003888.3	RefSeq	CDS	4842382	4842573	.	-	0	ID=cds4377;Parent=gene4472;Dbxref=Genbank:NP_628592.1,GeneID:1099865;Name=NP_628592.1;Note=SCD6.03c%2C afsR2%2C regulator of antibiotic production%2C len: 63 aa%3B identical to previously sequenced TR:Q57058 (EMBL:D45382) Streptomyces coelicolor AfsR2%2C 63 aa;gbkey=CDS;gene=afsR2;product=sigma-like protein;protein_id=NP_628592.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4842445	4846015	.	-	.	ID=id5562;Note=previously sequenced fragment EMBL:D90155 S. coelicolor A3(2) afsR gene.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	4842582	4842587	.	-	.	ID=id5563;gbkey=RBS
NC_003888.3	RefSeq	gene	4842787	4845768	.	-	.	ID=gene4473;Dbxref=GeneID:1099866;Name=afsR;gbkey=Gene;gene=afsR;gene_biotype=protein_coding;gene_synonym=afsR,SCD6.04c;locus_tag=SCO4426
NC_003888.3	RefSeq	CDS	4842787	4845768	.	-	0	ID=cds4378;Parent=gene4473;Dbxref=Genbank:NP_628593.1,GeneID:1099866;Name=NP_628593.1;Note=SCD6.04c%2C afsR%2C regulatory protein%2C len: 993 aa%3B identical to previously sequenced SW:AFSR_STRCO (EMBL:D90155) Streptomyces coelicolor regulatory protein AfsR%2C 993 aa. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=afsR;product=regulatory protein;protein_id=NP_628593.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4844758	4844781	.	-	.	ID=id5564;Dbxref=GeneID:1099866;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=afsR
NC_003888.3	RefSeq	gene	4845862	4846281	.	-	.	ID=gene4474;Dbxref=GeneID:1099867;Name=SCD6.05c;gbkey=Gene;gene=SCD6.05c;gene_biotype=protein_coding;gene_synonym=SCD6.05c;locus_tag=SCO4427
NC_003888.3	RefSeq	CDS	4845862	4846281	.	-	0	ID=cds4379;Parent=gene4474;Dbxref=Genbank:NP_628594.1,GeneID:1099867;Name=NP_628594.1;Note=SCD6.05c%2C hypothetical protein%2C len: 139 aa%3B similar to TR:P95144 (EMBL:Z83859) Mycobacterium tuberculosis hypothetical 14.7 kD protein MTCY359.02%2C 129 aa%3B fasta scores: opt: 462 z-score: 578.8 E(): 8.8e-25%3B 58.2%25 identity in 134 aa overlap;gbkey=CDS;gene=SCD6.05c;product=hypothetical protein;protein_id=NP_628594.1;transl_table=11
NC_003888.3	RefSeq	gene	4846352	4847875	.	-	.	ID=gene4475;Dbxref=GeneID:1099868;Name=SCD6.06c;gbkey=Gene;gene=SCD6.06c;gene_biotype=protein_coding;gene_synonym=SCD6.06c;locus_tag=SCO4428
NC_003888.3	RefSeq	CDS	4846352	4847875	.	-	0	ID=cds4380;Parent=gene4475;Dbxref=Genbank:NP_628595.1,GeneID:1099868;Name=NP_628595.1;Note=SCD6.06c%2C possible hypothetical protein%2C len: 507 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD6.06c;product=hypothetical protein;protein_id=NP_628595.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4847883	4847886	.	-	.	ID=id5565;gbkey=RBS
NC_003888.3	RefSeq	gene	4848064	4850667	.	+	.	ID=gene4476;Dbxref=GeneID:1099869;Name=fbiC;gbkey=Gene;gene=fbiC;gene_biotype=protein_coding;gene_synonym=SCD6.07;locus_tag=SCO4429
NC_003888.3	RefSeq	CDS	4848064	4850667	.	+	0	ID=cds4381;Parent=gene4476;Dbxref=Genbank:NP_628596.1,GeneID:1099869;Name=NP_628596.1;Note=7%2C8-didemethyl-8-hydroxy-5-deazariboflavin synthase%3B catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2%2C4(1H%2C3H)-pyrimidinedione to form 7%2C8-didemethyl-8-hydroxy-5-deazariboflavin (FO)%3B functions in F420 biosynthesis;gbkey=CDS;gene=fbiC;product=FO synthase;protein_id=NP_628596.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4850726	4850732	.	+	.	ID=id5566;gbkey=RBS
NC_003888.3	RefSeq	gene	4850736	4851305	.	+	.	ID=gene4477;Dbxref=GeneID:1099870;Name=SCD6.08;gbkey=Gene;gene=SCD6.08;gene_biotype=protein_coding;gene_synonym=SCD6.08;locus_tag=SCO4430
NC_003888.3	RefSeq	CDS	4850736	4851305	.	+	0	ID=cds4382;Parent=gene4477;Dbxref=Genbank:NP_628597.1,GeneID:1099870;Name=NP_628597.1;Note=SCD6.08%2C possible hypothetical protein%2C len: 189 aa%3B similar to TR:O86790 (EMBL:AL031317) Streptomyces coelicolor hypothetical protein SC6G4.27c%2C 184 aa%3B fasta scores: opt: 495 z-score: 536.2 E(): 2.1e-22%3B 48.1%25 identity in 181 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD6.08;product=hypothetical protein;protein_id=NP_628597.1;transl_table=11
NC_003888.3	RefSeq	gene	4851343	4851852	.	-	.	ID=gene4478;Dbxref=GeneID:1099871;Name=SCD6.09c;gbkey=Gene;gene=SCD6.09c;gene_biotype=protein_coding;gene_synonym=SCD6.09c;locus_tag=SCO4431
NC_003888.3	RefSeq	CDS	4851343	4851852	.	-	0	ID=cds4383;Parent=gene4478;Dbxref=Genbank:NP_628598.1,GeneID:1099871;Name=NP_628598.1;Note=SCD6.09c%2C possible integral membrane protein%2C len: 169 aa. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.09c;product=hypothetical protein;protein_id=NP_628598.1;transl_table=11
NC_003888.3	RefSeq	gene	4851904	4852578	.	+	.	ID=gene4479;Dbxref=GeneID:1099872;Name=SCD6.10;gbkey=Gene;gene=SCD6.10;gene_biotype=protein_coding;gene_synonym=SCD6.10;locus_tag=SCO4432
NC_003888.3	RefSeq	CDS	4851904	4852578	.	+	0	ID=cds4384;Parent=gene4479;Dbxref=Genbank:NP_628599.1,GeneID:1099872;Name=NP_628599.1;Note=SCD6.10%2C unknown%2C len: 224 aa;gbkey=CDS;gene=SCD6.10;product=hypothetical protein;protein_id=NP_628599.1;transl_table=11
NC_003888.3	RefSeq	gene	4852634	4853044	.	-	.	ID=gene4480;Dbxref=GeneID:1099873;Name=SCD6.11c;gbkey=Gene;gene=SCD6.11c;gene_biotype=protein_coding;gene_synonym=SCD6.11c;locus_tag=SCO4433
NC_003888.3	RefSeq	CDS	4852634	4853044	.	-	0	ID=cds4385;Parent=gene4480;Dbxref=Genbank:NP_628600.1,GeneID:1099873;Name=NP_628600.1;Note=SCD6.11c%2C possible integral membrane protein%2C len: 136 aa%3B similar to TR:O32937 (EMBL:Z98604) Mycobacterium leprae hypothetical 12.4 kD protein%2C 117 aa%3B fasta scores: opt: 308 z-score: 355.9 E(): 2.3e-12%3B 52.4%25 identity in 105 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.11c;product=hypothetical protein;protein_id=NP_628600.1;transl_table=11
NC_003888.3	RefSeq	gene	4853069	4853965	.	+	.	ID=gene4481;Dbxref=GeneID:1099874;Name=SCD6.12;gbkey=Gene;gene=SCD6.12;gene_biotype=protein_coding;gene_synonym=SCD6.12;locus_tag=SCO4434
NC_003888.3	RefSeq	CDS	4853069	4853965	.	+	0	ID=cds4386;Parent=gene4481;Dbxref=Genbank:NP_628601.1,GeneID:1099874;Name=NP_628601.1;Note=SCD6.12%2C probable LysR-family transcriptional regulator%2C len: 298 aa%3B similar to TR:Q9X9U9 (EMBL:Y18817) Streptomyces coelicolor A3(2) transcriptional regulator of LysR family%2C 307 aa%3B fasta scores: opt: 736 z-score: 859.4 E(): 0%3B 43.6%25 identity in 303 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature and possible helix-turn-helix motif at residues 18..39 (+4.94 SD);gbkey=CDS;gene=SCD6.12;product=LysR family transcriptional regulator;protein_id=NP_628601.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4853081	4853509	.	+	.	ID=id5567;Dbxref=GeneID:1099874;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 129.80%2C E-value 4.9e-35;gbkey=misc_feature;gene=SCD6.12
NC_003888.3	RefSeq	sequence_feature	4853123	4853215	.	+	.	ID=id5568;Dbxref=GeneID:1099874;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCD6.12
NC_003888.3	RefSeq	ribosome_entry_site	4854061	4854065	.	+	.	ID=id5569;gbkey=RBS
NC_003888.3	RefSeq	gene	4854071	4855186	.	+	.	ID=gene4482;Dbxref=GeneID:1099875;Name=SCD6.13;gbkey=Gene;gene=SCD6.13;gene_biotype=protein_coding;gene_synonym=SCD6.13;locus_tag=SCO4435
NC_003888.3	RefSeq	CDS	4854071	4855186	.	+	0	ID=cds4387;Parent=gene4482;Dbxref=Genbank:NP_628602.1,GeneID:1099875;Name=NP_628602.1;Note=SCD6.13%2C unknown%2C len: 371 aa. High content in alanine%2C glycine and leucine amino acid residues and also high G+C content (78.43%25);gbkey=CDS;gene=SCD6.13;product=hypothetical protein;protein_id=NP_628602.1;transl_table=11
NC_003888.3	RefSeq	gene	4855250	4855660	.	+	.	ID=gene4483;Dbxref=GeneID:1099876;Name=SCD6.14;gbkey=Gene;gene=SCD6.14;gene_biotype=protein_coding;gene_synonym=SCD6.14;locus_tag=SCO4436
NC_003888.3	RefSeq	CDS	4855250	4855660	.	+	0	ID=cds4388;Parent=gene4483;Dbxref=Genbank:NP_628603.1,GeneID:1099876;Name=NP_628603.1;Note=SCD6.14%2C possible lyase%2C len: 136 aa%3B highly similar to TR:O86701 (EMBL:AL031515) Streptomyces coelicolor lyase SC5C7.04%2C 138 aa%3B fasta scores: opt: 532 z-score: 662.4 E(): 2e-29%3B 53.7%25 identity in 136 aa overlap;gbkey=CDS;gene=SCD6.14;product=lyase;protein_id=NP_628603.1;transl_table=11
NC_003888.3	RefSeq	gene	4855908	4857491	.	-	.	ID=gene4484;Dbxref=GeneID:1099877;Name=SCD6.15c;gbkey=Gene;gene=SCD6.15c;gene_biotype=protein_coding;gene_synonym=SCD6.15c;locus_tag=SCO4437
NC_003888.3	RefSeq	CDS	4855908	4857491	.	-	0	ID=cds4389;Parent=gene4484;Dbxref=Genbank:NP_628604.1,GeneID:1099877;Name=NP_628604.1;Note=SCD6.15c%2C possible sodium-coupled permease%2C len: 527 aa%3B similar to TR:P74252 (EMBL:D90913) Synechocystis sp. sodium-coupled permease%2C 512 aa%3B fasta scores: opt: 451 z-score: 531.6 E(): 3.8e-22%3B 26.3%25 identity in 510 aa overlap. Contains Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.15c;product=sodium-coupled permease;protein_id=NP_628604.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4856181	4857395	.	-	.	ID=id5570;Dbxref=GeneID:1099877;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score -55.00%2C E-value 6.9e-06;gbkey=misc_feature;gene=SCD6.15c
NC_003888.3	RefSeq	gene	4857727	4859604	.	-	.	ID=gene4485;Dbxref=GeneID:1099878;Name=SCD6.16c;gbkey=Gene;gene=SCD6.16c;gene_biotype=protein_coding;gene_synonym=SCD6.16c;locus_tag=SCO4438
NC_003888.3	RefSeq	CDS	4857727	4859604	.	-	0	ID=cds4390;Parent=gene4485;Dbxref=Genbank:NP_628605.1,GeneID:1099878;Name=NP_628605.1;Note=SCD6.16c%2C possible integral membrane protein%2C len: 625 aa%3B similar to TR:Q9KXI6 (EMBL:AL357591) Streptomyces coelicolor  integral membrane protein SCC53.25%2C 551 aa%3B fasta scores: opt: 1266 Z-score: 1316.1 bits: 253.5 E(): 1.1e-65%3B 42.430%25 identity in 502 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.16c;product=hypothetical protein;protein_id=NP_628605.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4859614	4859617	.	-	.	ID=id5571;gbkey=RBS
NC_003888.3	RefSeq	gene	4859813	4862311	.	-	.	ID=gene4486;Dbxref=GeneID:1099879;Name=SCD6.17c;gbkey=Gene;gene=SCD6.17c;gene_biotype=protein_coding;gene_synonym=SCD6.17c;locus_tag=SCO4439
NC_003888.3	RefSeq	CDS	4859813	4862311	.	-	0	ID=cds4391;Parent=gene4486;Dbxref=Genbank:NP_628606.1,GeneID:1099879;Name=NP_628606.1;Note=SCD6.17c%2C possible D-alanyl-D-alanine carboxypeptidase%2C len: 832 aa%3B similar to TR:O54201 (EMBL:AJ001743) Streptomyces clavuligerus Pbp2 protein (penicillin binding protein PbpA)%2C 696 aa%3B fasta scores: opt: 955 z-score: 744.1 E(): 0%3B 37.0%25 identity in 757 aa overlap. Contains Pfam match to entry PF00768 Peptidase_S11%2C D-alanyl-D-alanine carboxypeptidase and high content in alanine%2C aspartic acid and glycine amino acid residues. Contains degenerate repeats: 2X (G/A)GAAPDSGSG(T/A)DATXXXPAPD(T/A) KPDQEPDADSEPAPDAQAASSRDGDAD;gbkey=CDS;gene=SCD6.17c;product=D-alanyl-D-alanine carboxypeptidase;protein_id=NP_628606.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4860110	4860847	.	-	.	ID=id5572;Dbxref=GeneID:1099879;Note=Pfam match to entry PF00768 Peptidase_S11%2C D-alanyl-D-alanine carboxypeptidase%2C score 70.00%2C E-value 5.1e-17;gbkey=misc_feature;gene=SCD6.17c
NC_003888.3	RefSeq	repeat_region	4861481	4861618	.	-	.	ID=id5573;Dbxref=GeneID:1099879;Note=degenerated repeat: (G/A)GAAPDSGSG(T/A)DATXXXPAPD(T/A) KPDQEPDADSEPAPDAQAASSRDGDAD;gbkey=repeat_region;gene=SCD6.17c
NC_003888.3	RefSeq	repeat_region	4861628	4861771	.	-	.	ID=id5574;Dbxref=GeneID:1099879;Note=degenerated repeat: (G/A)GAAPDSGSG(T/A)DATXXXPAPD(T/A) KPDQEPDADSEPAPDAQAASSRDGDAD;gbkey=repeat_region;gene=SCD6.17c
NC_003888.3	RefSeq	ribosome_entry_site	4862632	4862636	.	+	.	ID=id5575;gbkey=RBS
NC_003888.3	RefSeq	gene	4862642	4863400	.	+	.	ID=gene4487;Dbxref=GeneID:1099880;Name=SCD6.18;gbkey=Gene;gene=SCD6.18;gene_biotype=protein_coding;gene_synonym=SCD6.18;locus_tag=SCO4440
NC_003888.3	RefSeq	CDS	4862642	4863400	.	+	0	ID=cds4392;Parent=gene4487;Dbxref=Genbank:NP_628607.1,GeneID:1099880;Name=NP_628607.1;Note=SCD6.18%2C hypothetical protein%2C len: 252 aa%3B similar to TR:Q9X7M7 (EMBL:AL049587) Streptomyces coelicolor integral membrane protein SC5F2A.04%2C 302 aa%3B fasta scores: opt: 228 z-score: 237.1 E(): 9.5e-06%3B 32.6%25 identity in 224 aa overlap;gbkey=CDS;gene=SCD6.18;product=hypothetical protein;protein_id=NP_628607.1;transl_table=11
NC_003888.3	RefSeq	gene	4863620	4864507	.	+	.	ID=gene4488;Dbxref=GeneID:1099881;Name=SCD6.19;gbkey=Gene;gene=SCD6.19;gene_biotype=protein_coding;gene_synonym=SCD6.19;locus_tag=SCO4441
NC_003888.3	RefSeq	CDS	4863620	4864507	.	+	0	ID=cds4393;Parent=gene4488;Dbxref=Genbank:NP_628608.1,GeneID:1099881;Name=NP_628608.1;Note=SCD6.19%2C possible DNA-binding protein%2C len: 295 aa%3B similar to many other S. coelicolor hypothetical proteins%2C e.g. TR:Q9X8K0 (EMBL:AL049841) Streptomyces coelicolor hypothetical 30.9 kD protein SCE9.28c%2C 274 aa%3B fasta scores: opt: 717 z-score: 834.5 E(): 0%3B 42.6%25 identity in 263 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and a possible helix-turn-helix motif at residues 37..58 (+5.84 SD);gbkey=CDS;gene=SCD6.19;product=DNA-binding protein;protein_id=NP_628608.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4863701	4863865	.	+	.	ID=id5576;Dbxref=GeneID:1099881;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 35.80%2C E-value 1e-06;gbkey=misc_feature;gene=SCD6.19
NC_003888.3	RefSeq	ribosome_entry_site	4864672	4864675	.	+	.	ID=id5577;gbkey=RBS
NC_003888.3	RefSeq	gene	4864681	4864872	.	+	.	ID=gene4489;Dbxref=GeneID:1099882;Name=SCD6.20;gbkey=Gene;gene=SCD6.20;gene_biotype=protein_coding;gene_synonym=SCD6.20;locus_tag=SCO4442
NC_003888.3	RefSeq	CDS	4864681	4864872	.	+	0	ID=cds4394;Parent=gene4489;Dbxref=Genbank:NP_628609.1,GeneID:1099882;Name=NP_628609.1;Note=SCD6.20%2C hypothetical protein%2C len: 63 aa%3B similar to many other S. coelicolor hypothetical proteins%2C e.g. TR:CAB62714 (EMBL:AL133423) Streptomyces coelicolor hypothetical 6.9 kD protein SC4A7.10%2C 65 aa%3B fasta scores: opt: 159 z-score: 242.8 E(): 4.6e-06%3B 50.9%25 identity in 55 aa overlap;gbkey=CDS;gene=SCD6.20;product=hypothetical protein;protein_id=NP_628609.1;transl_table=11
NC_003888.3	RefSeq	gene	4864966	4865850	.	-	.	ID=gene4490;Dbxref=GeneID:1099883;Name=SCD6.21c;gbkey=Gene;gene=SCD6.21c;gene_biotype=protein_coding;gene_synonym=SCD6.21c;locus_tag=SCO4443
NC_003888.3	RefSeq	CDS	4864966	4865850	.	-	0	ID=cds4395;Parent=gene4490;Dbxref=Genbank:NP_628610.1,GeneID:1099883;Name=NP_628610.1;Note=SCD6.21c%2C possible merR-family transcriptional regulator%2C len: 294 aa%3B similar to TR:AAF11989 (EMBL:AE002074) Deinococcus radiodurans transcriptional regulator%2C merR-family DR2448%2C 280 aa%3B fasta scores: opt: 465 z-score: 562.4 E(): 7.3e-24%3B 43.0%25 identity in 286 aa overlap. Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and match to Prosite entry PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=CDS;gene=SCD6.21c;product=MerR family transcriptional regulator;protein_id=NP_628610.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4865680	4865790	.	-	.	ID=id5578;Dbxref=GeneID:1099883;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 38.80%2C E-value 1.2e-07;gbkey=misc_feature;gene=SCD6.21c
NC_003888.3	RefSeq	sequence_feature	4865722	4865790	.	-	.	ID=id5579;Dbxref=GeneID:1099883;Note=PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=misc_feature;gene=SCD6.21c
NC_003888.3	RefSeq	ribosome_entry_site	4865858	4865863	.	-	.	ID=id5580;gbkey=RBS
NC_003888.3	RefSeq	gene	4865924	4866505	.	-	.	ID=gene4491;Dbxref=GeneID:1099884;Name=SCD6.22c;gbkey=Gene;gene=SCD6.22c;gene_biotype=protein_coding;gene_synonym=SCD6.22c;locus_tag=SCO4444
NC_003888.3	RefSeq	CDS	4865924	4866505	.	-	0	ID=cds4396;Parent=gene4491;Dbxref=Genbank:NP_628611.1,GeneID:1099884;Name=NP_628611.1;Note=SCD6.22c%2C probable glutathione peroxidase%2C len: 193 aa%3B similar to SW:GPO_LACLC (EMBL:AJ000109) Lactococcus lactis glutathione peroxidase (EC 1.11.1.9) Gpo%2C 157 aa%3B fasta scores: opt: 530 z-score: 660.6 E(): 2.4e-29%3B 54.9%25 identity in 142 aa overlap. Contains Pfam match to entry PF00255 GSHPx%2C Glutathione peroxidases and match to Prosite entry PS00460 Glutathione peroxidases selenocysteine active site;gbkey=CDS;gene=SCD6.22c;product=glutathione peroxidase;protein_id=NP_628611.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4866083	4866364	.	-	.	ID=id5581;Dbxref=GeneID:1099884;Note=Pfam match to entry PF00255 GSHPx%2C Glutathione peroxidases%2C score 164.00%2C E-value 2.6e-45;gbkey=misc_feature;gene=SCD6.22c
NC_003888.3	RefSeq	sequence_feature	4866299	4866346	.	-	.	ID=id5582;Dbxref=GeneID:1099884;Note=PS00460 Glutathione peroxidases selenocysteine active site;gbkey=misc_feature;gene=SCD6.22c
NC_003888.3	RefSeq	gene	4866642	4867625	.	-	.	ID=gene4492;Dbxref=GeneID:1099885;Name=SCD6.23c;gbkey=Gene;gene=SCD6.23c;gene_biotype=protein_coding;gene_synonym=SCD6.23c;locus_tag=SCO4445
NC_003888.3	RefSeq	CDS	4866642	4867625	.	-	0	ID=cds4397;Parent=gene4492;Dbxref=Genbank:NP_628612.1,GeneID:1099885;Name=NP_628612.1;Note=SCD6.23c%2C possible transcriptional regulator%2C len: 327 aa%3B similar to TR:Q9XBC8 (EMBL:AL078635) Streptomyces coelicolor  transcriptional regulator CZA382.23c%2C 335 aa%3B fasta scores: opt: 347 z-score: 400.5 E(): 7.5e-15%3B 36.7%25 identity in 270 aa overlap;gbkey=CDS;gene=SCD6.23c;product=transcriptional regulator;protein_id=NP_628612.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4867637	4867642	.	-	.	ID=id5583;gbkey=RBS
NC_003888.3	RefSeq	gene	4867733	4868950	.	+	.	ID=gene4493;Dbxref=GeneID:1099886;Name=SCD6.24;gbkey=Gene;gene=SCD6.24;gene_biotype=protein_coding;gene_synonym=SCD6.24;locus_tag=SCO4446
NC_003888.3	RefSeq	CDS	4867733	4868950	.	+	0	ID=cds4398;Parent=gene4493;Dbxref=Genbank:NP_628613.1,GeneID:1099886;Name=NP_628613.1;Note=SCD6.24%2C possible integral membrane protein%2C len: 405 aa%3B similar to TR:CAB72211 (EMBL:AL138851) Streptomyces coelicolor  transport protein SCE59.24%2C 366 aa%3B fasta scores: opt: 204 z-score: 229.5 E(): 2.5e-05%3B 27.1%25 identity in 358 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.24;product=hypothetical protein;protein_id=NP_628613.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4869128	4869131	.	+	.	ID=id5584;gbkey=RBS
NC_003888.3	RefSeq	gene	4869137	4870225	.	+	.	ID=gene4494;Dbxref=GeneID:1099887;Name=SCD6.25;gbkey=Gene;gene=SCD6.25;gene_biotype=protein_coding;gene_synonym=SCD6.25;locus_tag=SCO4447
NC_003888.3	RefSeq	CDS	4869137	4870225	.	+	0	ID=cds4399;Parent=gene4494;Dbxref=Genbank:NP_628614.1,GeneID:1099887;Name=NP_628614.1;Note=SCD6.25%2C possible integral membrane protein%2C len: 362 aa%3B similar to TR:CAB56388 (EMBL:AL118515) Streptomyces coelicolor  integral membrane protein SCD17.11%2C 454 aa%3B fasta scores: opt: 715 z-score: 760.4 E(): 0%3B 41.6%25 identity in 368 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.25;product=hypothetical protein;protein_id=NP_628614.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4870230	4870287	.	+	.	ID=id5585;Note=conserved repeat 4x GTGACGGAGC(6);gbkey=repeat_region
NC_003888.3	RefSeq	gene	4870304	4870987	.	-	.	ID=gene4495;Dbxref=GeneID:1099888;Name=SCD6.26c;gbkey=Gene;gene=SCD6.26c;gene_biotype=protein_coding;gene_synonym=SCD6.26c;locus_tag=SCO4448
NC_003888.3	RefSeq	CDS	4870304	4870987	.	-	0	ID=cds4400;Parent=gene4495;Dbxref=Genbank:NP_628615.1,GeneID:1099888;Name=NP_628615.1;Note=SCD6.26c%2C unknown%2C len: 227 aa;gbkey=CDS;gene=SCD6.26c;product=hypothetical protein;protein_id=NP_628615.1;transl_table=11
NC_003888.3	RefSeq	gene	4871042	4871941	.	-	.	ID=gene4496;Dbxref=GeneID:1099889;Name=SCD6.27c;gbkey=Gene;gene=SCD6.27c;gene_biotype=protein_coding;gene_synonym=SCD6.27c;locus_tag=SCO4449
NC_003888.3	RefSeq	CDS	4871042	4871941	.	-	0	ID=cds4401;Parent=gene4496;Dbxref=Genbank:NP_628616.1,GeneID:1099889;Name=NP_628616.1;Note=SCD6.27c%2C probable hydrolase%2C len: 299 aa%3B similar to TR:O87275 (EMBL:AF015628) Staphylococcus cohnii streptogramin B lactonase VgbB%2C 295 aa%3B fasta scores: opt: 855 z-score: 887.0 E(): 0%3B 44.5%25 identity in 283 aa overlap. Contains 5x DNA degenerate repeats:G/R)(T/A)(G/R)RR(P/H)VVH;gbkey=CDS;gene=SCD6.27c;product=hydrolase;protein_id=NP_628616.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	4871334	4871360	.	-	.	ID=id5586;Dbxref=GeneID:1099889;Note=degenerate repeat (G/R)(T/A)(G/R)RR(P/H)VVH;gbkey=repeat_region;gene=SCD6.27c
NC_003888.3	RefSeq	repeat_region	4871460	4871486	.	-	.	ID=id5587;Dbxref=GeneID:1099889;Note=degenerate repeat (G/R)(T/A)(G/R)RR(P/H)VVH;gbkey=repeat_region;gene=SCD6.27c
NC_003888.3	RefSeq	repeat_region	4871579	4871606	.	-	.	ID=id5588;Dbxref=GeneID:1099889;Note=degenerate repeat (G/R)(T/A)(G/R)RR(P/H)VVH;gbkey=repeat_region;gene=SCD6.27c
NC_003888.3	RefSeq	repeat_region	4871705	4871732	.	-	.	ID=id5589;Dbxref=GeneID:1099889;Note=degenerate repeat (G/R)(T/A)(G/R)RR(P/H)VVH;gbkey=repeat_region;gene=SCD6.27c
NC_003888.3	RefSeq	repeat_region	4871825	4871852	.	-	.	ID=id5590;Dbxref=GeneID:1099889;Note=degenerate repeat (G/R)(T/A)(G/R)RR(P/H)VVH;gbkey=repeat_region;gene=SCD6.27c
NC_003888.3	RefSeq	gene	4872011	4872658	.	+	.	ID=gene4497;Dbxref=GeneID:1099890;Name=SCD6.28;gbkey=Gene;gene=SCD6.28;gene_biotype=protein_coding;gene_synonym=SCD6.28;locus_tag=SCO4450
NC_003888.3	RefSeq	CDS	4872011	4872658	.	+	0	ID=cds4402;Parent=gene4497;Dbxref=Genbank:NP_628617.1,GeneID:1099890;Name=NP_628617.1;Note=SCD6.28%2C probable tetR-family transcriptional regulator%2C len: 215 aa%3B similar to SW:TCMR_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C transcriptional repressor TcmR%2C 226 aa%3B fasta scores: opt: 295 z-score: 356.1 E(): 2.2e-12%3B 33.5%25 identity in 218 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 39..60 (+4.31 SD);gbkey=CDS;gene=SCD6.28;product=TetR family transcriptional regulator;protein_id=NP_628617.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4872077	4872217	.	+	.	ID=id5591;Dbxref=GeneID:1099890;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 33.10%2C E-value 1.9e-07;gbkey=misc_feature;gene=SCD6.28
NC_003888.3	RefSeq	ribosome_entry_site	4872763	4872766	.	+	.	ID=id5592;gbkey=RBS
NC_003888.3	RefSeq	gene	4872768	4874393	.	+	.	ID=gene4498;Dbxref=GeneID:1099891;Name=SCD6.29;gbkey=Gene;gene=SCD6.29;gene_biotype=protein_coding;gene_synonym=SCD6.29;locus_tag=SCO4451
NC_003888.3	RefSeq	CDS	4872768	4874393	.	+	0	ID=cds4403;Parent=gene4498;Dbxref=Genbank:NP_628618.1,GeneID:1099891;Name=NP_628618.1;Note=SCD6.29%2C probable export protein%2C len: 541 aa%3B similar to TR:CAB61602 (EMBL:AL133210) Streptomyces coelicolor export protein%2C SCG11.21c%2C 533 aa%3B fasta scores: opt: 832 z-score: 842.6 E(): 0%3B 33.7%25 identity in 531 aa overlap and to SW:TCMA_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA%2C 538 aa%3B fasta scores: opt: 701 z-score: 710.8 E(): 3.9e-32%3B 29.3%25 identity in 543 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.29;product=export protein;protein_id=NP_628618.1;transl_table=11
NC_003888.3	RefSeq	gene	4874365	4875516	.	-	.	ID=gene4499;Dbxref=GeneID:1099892;Name=SCD6.30c;gbkey=Gene;gene=SCD6.30c;gene_biotype=protein_coding;gene_synonym=SCD6.30c;locus_tag=SCO4452
NC_003888.3	RefSeq	CDS	4874365	4875516	.	-	0	ID=cds4404;Parent=gene4499;Dbxref=Genbank:NP_628619.1,GeneID:1099892;Name=NP_628619.1;Note=SCD6.30c%2C hypothetical protein%2C len: 383 aa%3B similar to TR:O86798 (EMBL:AL031317) Streptomyces coelicolor hypothetical 45.7 kD protein SC6G4.35%2C 419 aa%3B fasta scores: opt: 312 z-score: 358.2 E(): 1.7e-12%3B 42.3%25 identity in 404 aa overlap and to many RNA polymerase sigma facotrs%2C e.g. TR:Q984U6 (EMBL:AP003012) Rhizobium loti (Mesorhizobium loti) sigma-70 factor%2C ECF subfamily MLL7837 417 aa%3B fasta scores: opt: 535 Z-score: 594.4 E(): 1.8e-25%3B 43.325%25 identity in 397 aa overlap;gbkey=CDS;gene=SCD6.30c;product=RNA polymerase sigma factor;protein_id=NP_628619.1;transl_table=11
NC_003888.3	RefSeq	gene	4875525	4875932	.	-	.	ID=gene4500;Dbxref=GeneID:1099893;Name=SCD6.31c;gbkey=Gene;gene=SCD6.31c;gene_biotype=protein_coding;gene_synonym=SCD6.31c;locus_tag=SCO4453
NC_003888.3	RefSeq	CDS	4875525	4875932	.	-	0	ID=cds4405;Parent=gene4500;Dbxref=Genbank:NP_628620.1,GeneID:1099893;Name=NP_628620.1;Note=SCD6.31c%2C hypothetical protein%2C len: 135 aa%3B similar to TR:O86797 (EMBL:AL031317) Streptomyces coelicolor hypothetical 13.2 kD protein%2C 118 aa%3B fasta scores: opt: 158 z-score: 203.7 E(): 0.00069%3B 34.0%25 identity in 103 aa overlap;gbkey=CDS;gene=SCD6.31c;product=hypothetical protein;protein_id=NP_628620.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4875939	4875945	.	-	.	ID=id5593;gbkey=RBS
NC_003888.3	RefSeq	gene	4876023	4876625	.	-	.	ID=gene4501;Dbxref=GeneID:1099894;Name=SCD6.32c;gbkey=Gene;gene=SCD6.32c;gene_biotype=protein_coding;gene_synonym=SCD6.32c;locus_tag=SCO4454
NC_003888.3	RefSeq	CDS	4876023	4876625	.	-	0	ID=cds4406;Parent=gene4501;Dbxref=Genbank:NP_628621.1,GeneID:1099894;Name=NP_628621.1;Note=SCD6.32c%2C possible transcriptional regulator%2C len: 200 aa%3B similar to TR:O86514 (EMBL:AL031124) Streptomyces coelicolor  transcriptional regulator SC1C2.13%2C 194 aa%3B fasta scores: opt: 342 z-score: 413.0 E(): 1.5e-15%3B 39.0%25 identity in 172 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 35..56 (+2.77 SD);gbkey=CDS;gene=SCD6.32c;product=transcriptional regulator;protein_id=NP_628621.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4876431	4876571	.	-	.	ID=id5594;Dbxref=GeneID:1099894;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 42.60%2C E-value 4.4e-10;gbkey=misc_feature;gene=SCD6.32c
NC_003888.3	RefSeq	gene	4876807	4877370	.	+	.	ID=gene4502;Dbxref=GeneID:1099895;Name=SCD6.33;gbkey=Gene;gene=SCD6.33;gene_biotype=protein_coding;gene_synonym=SCD6.33;locus_tag=SCO4455
NC_003888.3	RefSeq	CDS	4876807	4877370	.	+	0	ID=cds4407;Parent=gene4502;Dbxref=Genbank:NP_628622.1,GeneID:1099895;Name=NP_628622.1;Note=SCD6.33%2C possible integral membrane protein%2C len: 187 aa%3B similar to TR:Q98DK3 (EMBL:AP003004) MLR4665 protein from Rhizobium loti (Mesorhizobium loti) fasta scores%3B opt: 419%2C Z-score: 476.1%2C E(): 6.9e-19%2C 43.373%25 identity (44.172%25 ungapped) in 166 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.33;product=hypothetical protein;protein_id=NP_628622.1;transl_table=11
NC_003888.3	RefSeq	gene	4877431	4879017	.	+	.	ID=gene4503;Dbxref=GeneID:1099896;Name=SCD6.34;gbkey=Gene;gene=SCD6.34;gene_biotype=protein_coding;gene_synonym=SCD6.34;locus_tag=SCO4456
NC_003888.3	RefSeq	CDS	4877431	4879017	.	+	0	ID=cds4408;Parent=gene4503;Dbxref=Genbank:NP_628623.1,GeneID:1099896;Name=NP_628623.1;Note=SCD6.34%2C possible membrane-associated oxidoreductase%2C len: 528 aa%3B similar to TR:CAB52970 (EMBL:AL109950) Streptomyces coelicolor membrane-associated oxidoreductase SCJ4.36c%2C 503 aa%3B fasta scores: opt: 657 z-score: 776.7 E(): 0%3B 38.8%25 identity in 551 aa overlap. Contains possible C-terminal region hydrophobic membrane spanning domains;gbkey=CDS;gene=SCD6.34;product=membrane-associated oxidoreductase;protein_id=NP_628623.1;transl_table=11
NC_003888.3	RefSeq	gene	4879075	4880076	.	-	.	ID=gene4504;Dbxref=GeneID:1099897;Name=SCD6.35c;gbkey=Gene;gene=SCD6.35c;gene_biotype=protein_coding;gene_synonym=SCD6.35c;locus_tag=SCO4457
NC_003888.3	RefSeq	CDS	4879075	4880076	.	-	0	ID=cds4409;Parent=gene4504;Dbxref=Genbank:NP_628624.1,GeneID:1099897;Name=NP_628624.1;Note=SCD6.35c%2C possible integral membrane protein%2C len: 333 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD6.35c;product=hypothetical protein;protein_id=NP_628624.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4880079	4880082	.	-	.	ID=id5595;gbkey=RBS
NC_003888.3	RefSeq	gene	4880330	4880974	.	-	.	ID=gene4505;Dbxref=GeneID:1099898;Name=SCD6.36c;gbkey=Gene;gene=SCD6.36c;gene_biotype=protein_coding;gene_synonym=SCD6.36c,SCD65.01c;locus_tag=SCO4458
NC_003888.3	RefSeq	CDS	4880330	4880974	.	-	0	ID=cds4410;Parent=gene4505;Dbxref=Genbank:NP_733638.1,GeneID:1099898;Name=NP_733638.1;Note=SCD65.01c%2C possible lipoprotein (fragment)%2C len: >146 aa%3B similar to TR:Q55943 (EMBL:D64005) Synechocystis sp. hypothetical 22.9 kDa protein SLL0788%2C 196 aa%3B fasta scores: opt: 203 z-score: 217.8 E(): 0.00012%3B 33.9%25 identity in 118 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence~SCD6.36c%2C unknown (fragment)%2C len: > 107 aa;gbkey=CDS;gene=SCD6.36c;product=lipoprotein;protein_id=NP_733638.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4880810	4880872	.	-	.	ID=id5596;Dbxref=GeneID:1099898;Note=alanine and serine amino acids rich region;gbkey=misc_feature;gene=SCD6.36c
NC_003888.3	RefSeq	sequence_feature	4880915	4880947	.	-	.	ID=id5597;Dbxref=GeneID:1099898;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD6.36c
NC_003888.3	RefSeq	gene	4881117	4881521	.	-	.	ID=gene4506;Dbxref=GeneID:1099899;Name=SCD65.02c;gbkey=Gene;gene=SCD65.02c;gene_biotype=protein_coding;gene_synonym=SCD65.02c;locus_tag=SCO4459
NC_003888.3	RefSeq	CDS	4881117	4881521	.	-	0	ID=cds4411;Parent=gene4506;Dbxref=Genbank:NP_628625.1,GeneID:1099899;Name=NP_628625.1;Note=SCD65.02c%2C possible membrane protein%2C len: 134 aa. Contains possible hydrophobic membrane spanning region. High alanine and glycine amino acid residues content;gbkey=CDS;gene=SCD65.02c;product=hypothetical protein;protein_id=NP_628625.1;transl_table=11
NC_003888.3	RefSeq	gene	4881544	4882014	.	+	.	ID=gene4507;Dbxref=GeneID:1099900;Name=SCD65.03;gbkey=Gene;gene=SCD65.03;gene_biotype=protein_coding;gene_synonym=SCD65.03;locus_tag=SCO4460
NC_003888.3	RefSeq	CDS	4881544	4882014	.	+	0	ID=cds4412;Parent=gene4507;Dbxref=Genbank:NP_628626.1,GeneID:1099900;Name=NP_628626.1;Note=SCD65.03%2C hypothetical protein%2C len: 156 aa%3B similar to the C-terminal region of the SCP1 plasmid borne TR:Q9AD28 (EMBL:AL590463) Streptomyces coelicolor hypothetical protein SCP1.122%2C 246 aa%3B fasta scores: opt: 444 Z-score: 518.8 E(): 2.9e-21%3B 55.906%25 identity in 127 aa overlap. Contains match to Prosite entry PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=CDS;gene=SCD65.03;product=hypothetical protein;protein_id=NP_628626.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4881667	4881714	.	+	.	ID=id5598;Dbxref=GeneID:1099900;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=misc_feature;gene=SCD65.03
NC_003888.3	RefSeq	gene	4882032	4882589	.	-	.	ID=gene4508;Dbxref=GeneID:1099901;Name=SCD65.04c;gbkey=Gene;gene=SCD65.04c;gene_biotype=protein_coding;gene_synonym=SCD65.04c;locus_tag=SCO4461
NC_003888.3	RefSeq	CDS	4882032	4882589	.	-	0	ID=cds4413;Parent=gene4508;Dbxref=Genbank:NP_628627.1,GeneID:1099901;Name=NP_628627.1;Note=SCD65.04c%2C possible tetR-family transcriptional regulatory protein%2C len: 185 aa%3B similar to SW:BETI_RHIME (EMBL:U39940) Rhizobium meliloti regulatory protein BetI%2C 203 aa%3B fasta scores: opt: 193 z-score: 251.5 E(): 1.5e-06%3B 27.3%25 identity in 183 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 33..54 (+3.34 SD);gbkey=CDS;gene=SCD65.04c;product=TetR family transcriptional regulator;protein_id=NP_628627.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4882401	4882541	.	-	.	ID=id5599;Dbxref=GeneID:1099901;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 44.00%2C E-value 9.7e-10;gbkey=misc_feature;gene=SCD65.04c
NC_003888.3	RefSeq	ribosome_entry_site	4882590	4882593	.	-	.	ID=id5600;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4882704	4882707	.	+	.	ID=id5601;gbkey=RBS
NC_003888.3	RefSeq	gene	4882715	4883962	.	+	.	ID=gene4509;Dbxref=GeneID:1099902;Name=SCD65.05;gbkey=Gene;gene=SCD65.05;gene_biotype=protein_coding;gene_synonym=SCD65.05;locus_tag=SCO4462
NC_003888.3	RefSeq	CDS	4882715	4883962	.	+	0	ID=cds4414;Parent=gene4509;Dbxref=Genbank:NP_628628.1,GeneID:1099902;Name=NP_628628.1;Note=SCD65.05%2C possible integral membrane protein%2C len: 415 aa%3B similar to TR:P75810 (EMBL:AE000186) Escherichia coli MosC protein%2C 402 aa%3B fasta scores: opt: 1317 z-score: 1364.7 E(): 0%3B 54.1%25 identity in 392 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD65.05;product=hypothetical protein;protein_id=NP_628628.1;transl_table=11
NC_003888.3	RefSeq	gene	4883959	4884108	.	+	.	ID=gene4510;Dbxref=GeneID:1099903;Name=SCD65.06;gbkey=Gene;gene=SCD65.06;gene_biotype=protein_coding;gene_synonym=SCD65.06;locus_tag=SCO4463
NC_003888.3	RefSeq	CDS	4883959	4884108	.	+	0	ID=cds4415;Parent=gene4510;Dbxref=Genbank:NP_628629.1,GeneID:1099903;Name=NP_628629.1;Note=SCD65.06%2C membrane protein%2C len: 49 aa%3B highly similar to the C-terminal region of SW:SUGE_ECOLI (EMBL:X69949) Escherichia coli SugE protein%2C chaperone%2C 105 aa%3B fasta scores: opt: 108 z-score: 175.6 E(): 0.028%3B 45.7%25 identity in 46 aa overlap. Contains match to Prosite entry PS00012 Phosphopantetheine attachment site. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD65.06;product=hypothetical protein;protein_id=NP_628629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4884019	4884066	.	+	.	ID=id5602;Dbxref=GeneID:1099903;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SCD65.06
NC_003888.3	RefSeq	gene	4884219	4884893	.	-	.	ID=gene4511;Dbxref=GeneID:1099904;Name=SCD65.07c;gbkey=Gene;gene=SCD65.07c;gene_biotype=protein_coding;gene_synonym=SCD65.07c;locus_tag=SCO4464
NC_003888.3	RefSeq	CDS	4884219	4884893	.	-	0	ID=cds4416;Parent=gene4511;Dbxref=Genbank:NP_628630.1,GeneID:1099904;Name=NP_628630.1;Note=SCD65.07c%2C probable hydrolase%2C len: 224 aa%3B similar to SW:ENTB_ECOLI (EMBL:M24148) Escherichia coli isochorismatase (EC 3.3.2.1) EntB%2C 285 aa%3B fasta scores: opt: 245 z-score: 306.5 E(): 1.3e-09%3B 29.2%25 identity in 202 aa overlap. Contains Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family and a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCD65.07c;product=hydrolase;protein_id=NP_628630.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4884312	4884803	.	-	.	ID=id5603;Dbxref=GeneID:1099904;Note=Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family%2C score 95.70%2C E-value 9e-25;gbkey=misc_feature;gene=SCD65.07c
NC_003888.3	RefSeq	sequence_feature	4884798	4884800	.	-	.	ID=id5604;Dbxref=GeneID:1099904;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD65.07c
NC_003888.3	RefSeq	ribosome_entry_site	4884897	4884906	.	-	.	ID=id5605;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4884916	4884920	.	+	.	ID=id5606;gbkey=RBS
NC_003888.3	RefSeq	gene	4884932	4885462	.	+	.	ID=gene4512;Dbxref=GeneID:1099905;Name=SCD65.08c;gbkey=Gene;gene=SCD65.08c;gene_biotype=protein_coding;gene_synonym=SCD65.08c;locus_tag=SCO4465
NC_003888.3	RefSeq	CDS	4884932	4885462	.	+	0	ID=cds4417;Parent=gene4512;Dbxref=Genbank:NP_628631.1,GeneID:1099905;Name=NP_628631.1;Note=SCD65.08c%2C hypothetical protein%2C len: 176 aa%3B similar to TR:P71704 (EMBL:Z80775) Mycobacterium tuberculosis hypothetical 20.4 kDa protein precursor MTCY21D4.10c%2C 180 aa%3B fasta scores: opt: 278 z-score: 350.1 E(): 5.3e-12%3B 33.7%25 identity in 172 aa overlap;gbkey=CDS;gene=SCD65.08c;product=hypothetical protein;protein_id=NP_628631.1;transl_table=11
NC_003888.3	RefSeq	gene	4885528	4886016	.	-	.	ID=gene4513;Dbxref=GeneID:1099906;Name=SCD65.09c;gbkey=Gene;gene=SCD65.09c;gene_biotype=protein_coding;gene_synonym=SCD65.09c;locus_tag=SCO4466
NC_003888.3	RefSeq	CDS	4885528	4886016	.	-	0	ID=cds4418;Parent=gene4513;Dbxref=Genbank:NP_628632.1,GeneID:1099906;Name=NP_628632.1;Note=SCD65.09c%2C unknown%2C len: 162 aa;gbkey=CDS;gene=SCD65.09c;product=hypothetical protein;protein_id=NP_628632.1;transl_table=11
NC_003888.3	RefSeq	gene	4886067	4886504	.	-	.	ID=gene4514;Dbxref=GeneID:1099907;Name=SCD65.10c;gbkey=Gene;gene=SCD65.10c;gene_biotype=protein_coding;gene_synonym=SCD65.10c;locus_tag=SCO4467
NC_003888.3	RefSeq	CDS	4886067	4886504	.	-	0	ID=cds4419;Parent=gene4514;Dbxref=Genbank:NP_628633.1,GeneID:1099907;Name=NP_628633.1;Note=SCD65.10c%2C unknown%2C len: 145 aa;gbkey=CDS;gene=SCD65.10c;product=hypothetical protein;protein_id=NP_628633.1;transl_table=11
NC_003888.3	RefSeq	gene	4886495	4886701	.	-	.	ID=gene4515;Dbxref=GeneID:1099908;Name=SCD65.11c;gbkey=Gene;gene=SCD65.11c;gene_biotype=protein_coding;gene_synonym=SCD65.11c;locus_tag=SCO4468
NC_003888.3	RefSeq	CDS	4886495	4886701	.	-	0	ID=cds4420;Parent=gene4515;Dbxref=Genbank:NP_628634.1,GeneID:1099908;Name=NP_628634.1;Note=SCD65.11c%2C unknown%2C len: 68 aa;gbkey=CDS;gene=SCD65.11c;product=hypothetical protein;protein_id=NP_628634.1;transl_table=11
NC_003888.3	RefSeq	gene	4886990	4888306	.	+	.	ID=gene4516;Dbxref=GeneID:1099909;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;gene_synonym=hemL,SCD65.12;locus_tag=SCO4469
NC_003888.3	RefSeq	CDS	4886990	4888306	.	+	0	ID=cds4421;Parent=gene4516;Dbxref=Genbank:NP_628635.1,GeneID:1099909;Name=NP_628635.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;gene=hemL;product=glutamate-1-semialdehyde aminotransferase;protein_id=NP_628635.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4887137	4888225	.	+	.	ID=id5607;Dbxref=GeneID:1099909;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 339.60%2C E-value 1.4e-117;gbkey=misc_feature;gene=hemL
NC_003888.3	RefSeq	sequence_feature	4887716	4887826	.	+	.	ID=id5608;Dbxref=GeneID:1099909;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=hemL
NC_003888.3	RefSeq	ribosome_entry_site	4888291	4888295	.	+	.	ID=id5609;Dbxref=GeneID:1099909;gbkey=RBS;gene=hemL
NC_003888.3	RefSeq	gene	4888303	4889004	.	+	.	ID=gene4517;Dbxref=GeneID:1099910;Name=SCD65.13;gbkey=Gene;gene=SCD65.13;gene_biotype=protein_coding;gene_synonym=SCD65.13;locus_tag=SCO4470
NC_003888.3	RefSeq	CDS	4888303	4889004	.	+	0	ID=cds4422;Parent=gene4517;Dbxref=Genbank:NP_628636.1,GeneID:1099910;Name=NP_628636.1;Note=SCD65.13%2C probable phosphoglycerate mutase%2C len: 233 aa%3B similar to SW:PMG2_ECOLI (EMBL:M97495) Escherichia coli probable phosphoglycerate mutase 2 (EC 5.4.2.1) GpmB%2C 215 aa%3B fasta scores: opt: 182 z-score: 227.1 E(): 3.5e-05%3B 26.5%25 identity in 215 aa overlap. Contains Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family;gbkey=CDS;gene=SCD65.13;product=phosphoglycerate mutase;protein_id=NP_628636.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4888417	4888584	.	+	.	ID=id5610;Dbxref=GeneID:1099910;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 15.00%2C E-value 0.0052;gbkey=misc_feature;gene=SCD65.13
NC_003888.3	RefSeq	stem_loop	4889103	4889154	.	+	.	ID=id5611;Note=possible stem loop. Score 51: 17/17 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4889161	4890459	.	+	.	ID=gene4518;Dbxref=GeneID:1099911;Name=SCD65.14;gbkey=Gene;gene=SCD65.14;gene_biotype=protein_coding;gene_synonym=SCD65.14;locus_tag=SCO4471
NC_003888.3	RefSeq	CDS	4889161	4890459	.	+	0	ID=cds4423;Parent=gene4518;Dbxref=Genbank:NP_628637.1,GeneID:1099911;Name=NP_628637.1;Note=SCD65.14%2C possible hypothetical protein%2C len: 432 aa%3B similar to TR:Q9X926 (EMBL:AL035636) Streptomyces coelicolor hypothetical protein SCH5.24c%2C 431 aa%3B fasta scores: opt: 1505 z-score: 1459.2 E(): 0%3B 50.0%25 identity in 438 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD65.14;product=hypothetical protein;protein_id=NP_628637.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4889215	4889247	.	+	.	ID=id5612;Dbxref=GeneID:1099911;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD65.14
NC_003888.3	RefSeq	gene	4890549	4891220	.	+	.	ID=gene4519;Dbxref=GeneID:1099912;Name=SCD65.15;gbkey=Gene;gene=SCD65.15;gene_biotype=protein_coding;gene_synonym=SCD65.15;locus_tag=SCO4472
NC_003888.3	RefSeq	CDS	4890549	4891220	.	+	0	ID=cds4424;Parent=gene4519;Dbxref=Genbank:NP_628638.1,GeneID:1099912;Name=NP_628638.1;Note=SCD65.15%2C possible hypothetical protein%2C len: 223 aa%3B similar to TR:O06392 (EMBL:Z95558) Mycobacterium tuberculosis hypothetical 23.2 kDa protein MTCY25D10.05%2C 216 aa%3B fasta scores: opt: 431 z-score: 460.1 E(): 3.7e-18%3B 39.2%25 identity in 204 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD65.15;product=hypothetical protein;protein_id=NP_628638.1;transl_table=11
NC_003888.3	RefSeq	gene	4891231	4891992	.	+	.	ID=gene4520;Dbxref=GeneID:1099913;Name=SCD65.16;gbkey=Gene;gene=SCD65.16;gene_biotype=protein_coding;gene_synonym=SCD65.16;locus_tag=SCO4473
NC_003888.3	RefSeq	CDS	4891231	4891992	.	+	0	ID=cds4425;Parent=gene4520;Dbxref=Genbank:NP_628639.1,GeneID:1099913;Name=NP_628639.1;Note=SCD65.16%2C possible cytochrome biogenesis related protein%2C len: 253 aa%3B similar to SW:CCDA_BACSU (EMBL:X87845) Bacillus subtilis cytochrome C-type biogenesis protein CcdA%2C 235 aa: fasta scores: opt: 454 z-score: 507.4 E(): 8.5e-21%3B 33.3%25 identity in 228 aa overlap. Contains match to Prosite entry PS00086 Cytochrome P450 cysteine heme-iron ligand signature. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD65.16;product=cytochrome biogenesis-like protein;protein_id=NP_628639.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4891672	4891701	.	+	.	ID=id5613;Dbxref=GeneID:1099913;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SCD65.16
NC_003888.3	RefSeq	gene	4891996	4893720	.	+	.	ID=gene4521;Dbxref=GeneID:1099914;Name=SCD65.17;gbkey=Gene;gene=SCD65.17;gene_biotype=protein_coding;gene_synonym=SCD65.17;locus_tag=SCO4474
NC_003888.3	RefSeq	CDS	4891996	4893720	.	+	0	ID=cds4426;Parent=gene4521;Dbxref=Genbank:NP_628640.1,GeneID:1099914;Name=NP_628640.1;Note=SCD65.17%2C possible integral membrane protein%2C len: 574 aa%3B similar to TR:O06394 (EMBL:Z95558) Mycobacterium tuberculosis hypothetical 57.1 kDa protein MTCY25D10.07%2C 529 aa%3B fasta scores: opt: 1079 z-score: 1222.2 E(): 0%3B 37.3%25 identity in 539 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD65.17;product=hypothetical protein;protein_id=NP_628640.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4893894	4893899	.	+	.	ID=id5614;gbkey=RBS
NC_003888.3	RefSeq	gene	4893909	4895051	.	+	.	ID=gene4522;Dbxref=GeneID:1099915;Name=SCD65.18;gbkey=Gene;gene=SCD65.18;gene_biotype=protein_coding;gene_synonym=SCD65.18;locus_tag=SCO4475
NC_003888.3	RefSeq	CDS	4893909	4895051	.	+	0	ID=cds4427;Parent=gene4522;Dbxref=Genbank:NP_628641.1,GeneID:1099915;Name=NP_628641.1;Note=SCD65.18%2C possible cytochrome biogenesis related protein%2C len: 380 aa%3B similar to SW:CCSA_GUITH (EMBL:X52159) Guillardia theta cytochrome biogenesis protein CcsA%2C 301 aa%3B fasta scores: opt: 455 z-score: 519.0 E(): 1.9e-21%3B 35.6%25 identity in 253 aa overlap. Contains Pfam match to entry PF01578 CytC_asm%2C Cytochrome C assembly protein and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD65.18;product=cytochrome biogenesis-like protein;protein_id=NP_628641.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4894398	4894943	.	+	.	ID=id5615;Dbxref=GeneID:1099915;Note=Pfam match to entry PF01578 CytC_asm%2C Cytochrome C assembly protein%2C score 98.30%2C E-value 1.6e-25;gbkey=misc_feature;gene=SCD65.18
NC_003888.3	RefSeq	stem_loop	4895056	4895114	.	+	.	ID=id5616;Note=possible stem loop. Score 51: 25/28 (89%25) matches%2C 1 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	4895198	4896619	.	-	.	ID=gene4523;Dbxref=GeneID:1099916;Name=SCD65.19c;gbkey=Gene;gene=SCD65.19c;gene_biotype=protein_coding;gene_synonym=SCD65.19c;locus_tag=SCO4476
NC_003888.3	RefSeq	CDS	4895198	4896619	.	-	0	ID=cds4428;Parent=gene4523;Dbxref=Genbank:NP_628642.1,GeneID:1099916;Name=NP_628642.1;Note=SCD65.19c%2C hypothetical protein%2C len: 473 aa%3B similar to TR:O07803 (EMBL:Z97188) Mycobacterium tuberculosis hypothetical 52.1 kDa protein MTCY409.10%2C 468 aa%3B fasta scores: opt: 575 z-score: 663.0 E(): 1.8e-29%3B 27.8%25 identity in 464 aa overlap;gbkey=CDS;gene=SCD65.19c;product=hypothetical protein;protein_id=NP_628642.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4896628	4896631	.	-	.	ID=id5617;gbkey=RBS
NC_003888.3	RefSeq	gene	4896795	4897511	.	-	.	ID=gene4524;Dbxref=GeneID:1099917;Name=SCD65.20c;gbkey=Gene;gene=SCD65.20c;gene_biotype=protein_coding;gene_synonym=SCD65.20c;locus_tag=SCO4477
NC_003888.3	RefSeq	CDS	4896795	4897511	.	-	0	ID=cds4429;Parent=gene4524;Dbxref=Genbank:NP_628643.1,GeneID:1099917;Name=NP_628643.1;Note=SCD65.20c%2C probable merR-family transcriptional regulatory protein%2C len: 238 aa%3B presents two hits to TR:Q9RKM5 (EMBL:AL138978) Streptomyces coelicolor merR family transcriptional regulator SCD17.06c%2C 319 aa%3B blastp scores for N-terminal domain: Score%3D 143 (50.3 bits)%2C Expect%3D 7.3e-08%2C P%3D 7.3e-08%3B Identities%3D 42/108 (38%25)%2C Positives%3D 57/108 (52%25) and blastp scores for C-terminal domain: Score%3D 102 (35.9 bits)%2C Expect%3D 0.0052%2C P%3D 0.0052%3B Identities%3D 33/96 (34%25)%2C Positives%3D 45/96 (46%25). Contains 2x Pfam matches to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and also two possible helix-turn-helix motives at residues 8..29 (+4.71 SD) and 130..151 (+4.79 SD);gbkey=CDS;gene=SCD65.20c;product=MerR family transcriptional regulator;protein_id=NP_628643.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4897008	4897115	.	-	.	ID=id5618;Dbxref=GeneID:1099917;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 26.80%2C E-value 0.00027;gbkey=misc_feature;gene=SCD65.20c
NC_003888.3	RefSeq	sequence_feature	4897374	4897475	.	-	.	ID=id5619;Dbxref=GeneID:1099917;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 31.80%2C E-value 1.6e-05;gbkey=misc_feature;gene=SCD65.20c
NC_003888.3	RefSeq	gene	4897544	4898155	.	+	.	ID=gene4525;Dbxref=GeneID:1099918;Name=SCD65.21;gbkey=Gene;gene=SCD65.21;gene_biotype=protein_coding;gene_synonym=SCD65.21;locus_tag=SCO4478
NC_003888.3	RefSeq	CDS	4897544	4898155	.	+	0	ID=cds4430;Parent=gene4525;Dbxref=Genbank:NP_628644.1,GeneID:1099918;Name=NP_628644.1;Note=SCD65.21%2C possible transferase%2C len: 203 aa%3B similar to TR:Q9RWR3 (EMBL:AE001918) Deinococcus radiodurans cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein DR603%2C 548 aa%3B fasta scores: opt: 447 z-score: 514.2 E(): 3.6e-21%3B 44.1%25 identity in 186 aa overlap. Contains match to Prosite entry PS00847 MCM family signature;gbkey=CDS;gene=SCD65.21;product=transferase;protein_id=NP_628644.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4897985	4898011	.	+	.	ID=id5620;Dbxref=GeneID:1099918;Note=PS00847 MCM family signature;gbkey=misc_feature;gene=SCD65.21
NC_003888.3	RefSeq	gene	4898224	4899117	.	-	.	ID=gene4526;Dbxref=GeneID:1099919;Name=SCD65.22c;gbkey=Gene;gene=SCD65.22c;gene_biotype=protein_coding;gene_synonym=SCD65.22c;locus_tag=SCO4479
NC_003888.3	RefSeq	CDS	4898224	4899117	.	-	0	ID=cds4431;Parent=gene4526;Dbxref=Genbank:NP_628645.1,GeneID:1099919;Name=NP_628645.1;Note=SCD65.22c%2C possible  hydrolase%2C len: 297 aa%3B similar to TR:O31386 (EMBL:Y10223) Bradyrhizobium japonicum b-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) PcaD%2C 260 aa%3B fasta scores: opt: 188 z-score: 220.7 E(): 8e-05%3B 32.1%25 identity in 156 aa overlap. Contains match to Prosite entry PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD65.22c;product=hydrolase;protein_id=NP_628645.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4899079	4899108	.	-	.	ID=id5621;Dbxref=GeneID:1099919;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SCD65.22c
NC_003888.3	RefSeq	ribosome_entry_site	4899124	4899128	.	-	.	ID=id5622;gbkey=RBS
NC_003888.3	RefSeq	gene	4899301	4899918	.	-	.	ID=gene4527;Dbxref=GeneID:1099920;Name=SCD65.23c;gbkey=Gene;gene=SCD65.23c;gene_biotype=protein_coding;gene_synonym=SCD65.23c;locus_tag=SCO4480
NC_003888.3	RefSeq	CDS	4899301	4899918	.	-	0	ID=cds4432;Parent=gene4527;Dbxref=Genbank:NP_628646.1,GeneID:1099920;Name=NP_628646.1;Note=SCD65.23c%2C possible tetR-family transcriptional regulatory protein%2C len: 205 aa%3B similar to TR:O53661 (EMBL:AL021929) Mycobacterium tuberculosis regulatory protein MTV034.04%2C 204 aa%3B fasta scores: opt: 193 z-score: 241.7 E(): 5.4e-06%3B 25.7%25 identity in 187 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 37..58 (+2.77 SD);gbkey=CDS;gene=SCD65.23c;product=TetR family transcriptional regulator;protein_id=NP_628646.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4899718	4899858	.	-	.	ID=id5623;Dbxref=GeneID:1099920;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 57.10%2C E-value 3.4e-13;gbkey=misc_feature;gene=SCD65.23c
NC_003888.3	RefSeq	ribosome_entry_site	4899921	4899924	.	-	.	ID=id5624;gbkey=RBS
NC_003888.3	RefSeq	gene	4900077	4901975	.	+	.	ID=gene4528;Dbxref=GeneID:1099921;Name=SCD65.24;gbkey=Gene;gene=SCD65.24;gene_biotype=protein_coding;gene_synonym=SCD65.24,SCD69.01;locus_tag=SCO4481
NC_003888.3	RefSeq	CDS	4900077	4901975	.	+	0	ID=cds4433;Parent=gene4528;Dbxref=Genbank:NP_733639.1,GeneID:1099921;Name=NP_733639.1;Note=SCD69.01%2C probable Ser/Thr protein kinase%2C len: >607 aa%3B similar to SW:AFSK_STRCO (EMBL:D15062) Streptomyces coelicolor Ser/Thr protein kinase AfsK%2C 799 aa%3B fasta scores: opt: 649 z-score: 427.0 E(): 2.5e-16%3B 35.8%25 identity in 408 aa overlap also similar to S. coelicolor SCD69.08 and TR:Q9ZN80 (EMBL:AB021679) Streptomyces coelicolor Ser/Thr protein kinase PkaG%2C 592 aa%3B fasta scores: opt: 715 z-score: 417.5 E(): 1e-17%3B 32.7%25 identity in 538 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature. Contains also a TTA leucine codon%2C possible target for bldA regulation~SCD65.24%2C probable Ser/Thr protein kinase%2C len: >56 aa%3B similar to SW:AFSK_STRCO (EMBL:D15062) Streptomyces coelicolor Ser/Thr protein kinase AfsK (EC 2.7.1.-)%2C 799 aa%3B fasta scores: opt: 137 z-score: 184.3 E(): 0.0092%3B 52.4%25 identity in 42 aa overlap and to TR:CAB92109 (EMBL:AL356334) Streptomyces coelicolor Ser/Thr protein kinase SCD69.08%2C 626 aa%3B fasta scores: opt: 316 z-score: 370.1 E(): 5.6e-15%3B 86.8%25 identity in 53 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and match to Prosite entry PS00107 Protein kinases ATP-binding region signature;gbkey=CDS;gene=SCD65.24;product=Ser/Thr protein kinase;protein_id=NP_733639.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4900143	4900232	.	+	.	ID=id5625;Dbxref=GeneID:1099921;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 20.00%2C E-value 0.00019;gbkey=misc_feature;gene=SCD65.24
NC_003888.3	RefSeq	sequence_feature	4900152	4900898	.	+	.	ID=id5626;Dbxref=GeneID:1099921;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 124.30%2C E-value 2.2e-33;gbkey=misc_feature;gene=SCD65.24
NC_003888.3	RefSeq	sequence_feature	4900161	4900226	.	+	.	ID=id5627;Dbxref=GeneID:1099921;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCD65.24
NC_003888.3	RefSeq	sequence_feature	4900305	4900307	.	+	.	ID=id5628;Dbxref=GeneID:1099921;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD65.24
NC_003888.3	RefSeq	sequence_feature	4900500	4900538	.	+	.	ID=id5629;Dbxref=GeneID:1099921;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SCD65.24
NC_003888.3	RefSeq	repeat_region	4901367	4901600	.	+	.	ID=id5630;Dbxref=GeneID:1099921;Note=14x degenerate repeat: G(G/A/D/S)G(G/A/D/S);gbkey=repeat_region;gene=SCD65.24
NC_003888.3	RefSeq	gene	4901972	4902832	.	-	.	ID=gene4529;Dbxref=GeneID:1099922;Name=SCD69.02c;gbkey=Gene;gene=SCD69.02c;gene_biotype=protein_coding;gene_synonym=SCD69.02c;locus_tag=SCO4482
NC_003888.3	RefSeq	CDS	4901972	4902832	.	-	0	ID=cds4434;Parent=gene4529;Dbxref=Genbank:NP_628647.1,GeneID:1099922;Name=NP_628647.1;Note=SCD69.02c%2C probable lysR-family transcriptional regulator%2C len: 286 aa%3B similar to TR:CAB55655 (EMBL:AL117385) Streptomyces coelicolor lysR-family transcriptional regulator SC5G9.07c%2C 287 aa%3B fasta scores: opt: 495 z-score: 551.1 E(): 3.1e-23%3B 37.0%25 identity in 297 aa overlap and to SW:ALSR_BACSU (EMBL:L04470) Bacillus subtilis als operon regulatory protein AlsR%2C 302 aa%3B fasta scores: opt: 390 z-score: 435.8 E(): 8.2e-17%3B 32.1%25 identity in 293 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Contains also possible helix-turn-helix motif at residues 19..42 (+4.15 SD);gbkey=CDS;gene=SCD69.02c;product=LysR family transcriptional regulator;protein_id=NP_628647.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4902395	4902817	.	-	.	ID=id5631;Dbxref=GeneID:1099922;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 124.00%2C E-value 2.8e-33;gbkey=misc_feature;gene=SCD69.02c
NC_003888.3	RefSeq	sequence_feature	4902683	4902775	.	-	.	ID=id5632;Dbxref=GeneID:1099922;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCD69.02c
NC_003888.3	RefSeq	gene	4902880	4903482	.	+	.	ID=gene4530;Dbxref=GeneID:1099923;Name=SCD69.03;gbkey=Gene;gene=SCD69.03;gene_biotype=protein_coding;gene_synonym=SCD69.03;locus_tag=SCO4483
NC_003888.3	RefSeq	CDS	4902880	4903482	.	+	0	ID=cds4435;Parent=gene4530;Dbxref=Genbank:NP_628648.1,GeneID:1099923;Name=NP_628648.1;Note=SCD69.03%2C hypothetical protein%2C len: 200 aa%3B similar to TR:Q9Z582 (EMBL:AL035569) Streptomyces coelicolor SC8D9.09 protein%2C 164 aa%3B fasta scores: opt: 246 z-score: 291.3 E(): 9.1e-09%3B 34.1%25 identity in 132 aa overlap;gbkey=CDS;gene=SCD69.03;product=hypothetical protein;protein_id=NP_628648.1;transl_table=11
NC_003888.3	RefSeq	gene	4903479	4903841	.	+	.	ID=gene4531;Dbxref=GeneID:1099924;Name=SCD69.04;gbkey=Gene;gene=SCD69.04;gene_biotype=protein_coding;gene_synonym=SCD69.04;locus_tag=SCO4484
NC_003888.3	RefSeq	CDS	4903479	4903841	.	+	0	ID=cds4436;Parent=gene4531;Dbxref=Genbank:NP_628649.1,GeneID:1099924;Name=NP_628649.1;Note=SCD69.04%2C possible integral membrane protein%2C len: 120 aa%3B similar to TR:O85187 (EMBL:AF051158) Vibrio cholerae sodium-proton antiporter affecting protein NhaA%2C 382 aa%3B fasta scores: opt: 116 z-score: 146.3 E(): 1.1%3B 32.2%25 identity in 118 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD69.04;product=hypothetical protein;protein_id=NP_628649.1;transl_table=11
NC_003888.3	RefSeq	gene	4903856	4904881	.	-	.	ID=gene4532;Dbxref=GeneID:1099925;Name=SCD69.05c;gbkey=Gene;gene=SCD69.05c;gene_biotype=protein_coding;gene_synonym=SCD69.05c;locus_tag=SCO4485
NC_003888.3	RefSeq	CDS	4903856	4904881	.	-	0	ID=cds4437;Parent=gene4532;Dbxref=Genbank:NP_628650.1,GeneID:1099925;Name=NP_628650.1;Note=SCD69.05c%2C possible transcriptional regulator%2C len: 341 aa%3B similar to TR:CAB81864 (EMBL:AL161691) Streptomyces coelicolor  deoR-family transcriptional regulator SCD40A.19c%2C 339 aa%3B fasta scores: opt: 480 z-score: 514.9 E(): 3.2e-21%3B 39.3%25 identity in 321 aa overlap. Contains possible helix-turn-helix motif at residues 21..42 (+5.42 SD);gbkey=CDS;gene=SCD69.05c;product=transcriptional regulator;protein_id=NP_628650.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4904894	4907754	.	+	.	ID=id5633;Note=previously sequenced fragment EMBL:AB021679 Streptomyces coelicolor pkaG gene for eukaryotic-type Ser/Thr protein kinase%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	4904964	4904969	.	+	.	ID=id5634;gbkey=RBS
NC_003888.3	RefSeq	gene	4904976	4905383	.	+	.	ID=gene4533;Dbxref=GeneID:1099926;Name=SCD69.06;gbkey=Gene;gene=SCD69.06;gene_biotype=protein_coding;gene_synonym=SCD69.06;locus_tag=SCO4486
NC_003888.3	RefSeq	CDS	4904976	4905383	.	+	0	ID=cds4438;Parent=gene4533;Dbxref=Genbank:NP_628651.1,GeneID:1099926;Name=NP_628651.1;Note=SCD69.06%2C hypothetical protein%2C len: 135 aa%3B similar to TR:Q9Z549 (EMBL:AL035212) Streptomyces coelicolor quinone protein SC9B2.10c%2C 130 aa%3B fasta scores: opt: 191 z-score: 257.8 E(): 6.8e-07%3B 34.6%25 identity in 127 aa overlap and to TR:Q98IY9 (EMBL:AP002999) Rhizobium loti (Mesorhizobium loti) MLR2185 protein%2C 133 aa%3B fasta scores: opt: 522 Z-score: 639.6 E(): 5.4e-28%3B 64.122%25 identity in 131 aa overlap;gbkey=CDS;gene=SCD69.06;product=hypothetical protein;protein_id=NP_628651.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4905433	4905436	.	+	.	ID=id5635;gbkey=RBS
NC_003888.3	RefSeq	gene	4905443	4907221	.	+	.	ID=gene4534;Dbxref=GeneID:1099927;Name=pkaG;gbkey=Gene;gene=pkaG;gene_biotype=protein_coding;gene_synonym=pkaG,SCD69.07;locus_tag=SCO4487
NC_003888.3	RefSeq	CDS	4905443	4907221	.	+	0	ID=cds4439;Parent=gene4534;Dbxref=Genbank:NP_628652.1,GeneID:1099927;Name=NP_628652.1;Note=SCD69.07%2C pkaG%2C Ser/Thr protein kinase%2C len: 592 aa%3B identical to previously sequenced TR:Q9ZN80 (EMBL:AB021679) Streptomyces coelicolor Ser/Thr protein kinase PkaG%2C 592 aa. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature;gbkey=CDS;gene=pkaG;product=Ser/Thr protein kinase;protein_id=NP_628652.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4905485	4906234	.	+	.	ID=id5636;Dbxref=GeneID:1099927;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 141.30%2C E-value 1.8e-38;gbkey=misc_feature;gene=pkaG
NC_003888.3	RefSeq	sequence_feature	4905503	4905571	.	+	.	ID=id5637;Dbxref=GeneID:1099927;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=pkaG
NC_003888.3	RefSeq	sequence_feature	4905839	4905877	.	+	.	ID=id5638;Dbxref=GeneID:1099927;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaG
NC_003888.3	RefSeq	ribosome_entry_site	4907332	4907335	.	+	.	ID=id5639;gbkey=RBS
NC_003888.3	RefSeq	gene	4907340	4909220	.	+	.	ID=gene4535;Dbxref=GeneID:1099928;Name=SCD69.08;gbkey=Gene;gene=SCD69.08;gene_biotype=protein_coding;gene_synonym=SCD69.08;locus_tag=SCO4488
NC_003888.3	RefSeq	CDS	4907340	4909220	.	+	0	ID=cds4440;Parent=gene4535;Dbxref=Genbank:NP_628653.1,GeneID:1099928;Name=NP_628653.1;Note=SCD69.08%2C probable Ser/Thr protein kinase%2C len: 626 aa%3B similar to TR:Q9XAI1 (EMBL:AL079348) Streptomyces coelicolor  Ser/Thr protein kinase SC66T3.32c%2C 783 aa%3B fasta scores: opt: 918 z-score: 575.3 E(): 1.4e-24%3B 37.6%25 identity in 558 aa overlap%2C to S. coelicolor SCD6901%2C 607 aa%3B fasta scores: opt: 2094 z-score: 1205.1 E(): 0%3B 59.6%25 identity in 614 aa overlap and to TR:Q9ZN80 (EMBL:AB021679) Streptomyces coelicolor Ser/Thr protein kinase PkaG%2C 592 aa%3B fasta scores: opt: 810 z-score: 475.9 E(): 5.8e-21%3B 32.1%25 identity in 595 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and match to Prosite entry PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature. Contains also a possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD69.08;product=Ser/Thr protein kinase;protein_id=NP_628653.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4907421	4908176	.	+	.	ID=id5640;Dbxref=GeneID:1099928;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 112.80%2C E-value 3.3e-30;gbkey=misc_feature;gene=SCD69.08
NC_003888.3	RefSeq	sequence_feature	4907439	4907504	.	+	.	ID=id5641;Dbxref=GeneID:1099928;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCD69.08
NC_003888.3	RefSeq	sequence_feature	4907775	4907813	.	+	.	ID=id5642;Dbxref=GeneID:1099928;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SCD69.08
NC_003888.3	RefSeq	gene	4909224	4909526	.	-	.	ID=gene4536;Dbxref=GeneID:1099929;Name=SCD69.09c;gbkey=Gene;gene=SCD69.09c;gene_biotype=protein_coding;gene_synonym=SCD69.09c;locus_tag=SCO4489
NC_003888.3	RefSeq	CDS	4909224	4909526	.	-	0	ID=cds4441;Parent=gene4536;Dbxref=Genbank:NP_628654.1,GeneID:1099929;Name=NP_628654.1;Note=SCD69.09c%2C membrane protein%2C len: 100 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD69.09c;product=hypothetical protein;protein_id=NP_628654.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4909533	4909536	.	-	.	ID=id5643;gbkey=RBS
NC_003888.3	RefSeq	gene	4909614	4911071	.	+	.	ID=gene4537;Dbxref=GeneID:1099930;Name=SCD69.10;gbkey=Gene;gene=SCD69.10;gene_biotype=protein_coding;gene_synonym=SCD69.10;locus_tag=SCO4490
NC_003888.3	RefSeq	CDS	4909614	4911071	.	+	0	ID=cds4442;Parent=gene4537;Dbxref=Genbank:NP_628655.1,GeneID:1099930;Name=NP_628655.1;Note=SCD69.10%2C decarboxylase%2C len: 485 aa%3B similar to SW:Y209_ARCFU (EMBL:AE001091) Archaeoglobus fulgidus hypothetical protein AF0209%2C 481 aa%3B fasta scores: opt: 1557 z-score: 1800.8 E(): 0%3B 48.6%25 identity in 484 aa overlap and to SW:P26615 (UBID_ECOLI) 3-Octaprenyl-4-hydroxybenzoate carboxy-lyase from Escherichia coli (497 aa) fasta scores%3B opt: 1293%2C Z-score: 1478.5%2C 40.162%25 identity (41.336%25 ungapped) in 493 aa overlap. Contains Pfam match to entry PF01977 UPF0096%2C Protein of unknown function.;gbkey=CDS;gene=SCD69.10;product=decarboxylase;protein_id=NP_628655.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4909641	4910900	.	+	.	ID=id5644;Dbxref=GeneID:1099930;Note=Pfam match to entry PF01977 UPF0096%2C Protein of unknown function%2C score 574.60%2C E-value 6.2e-169;gbkey=misc_feature;gene=SCD69.10
NC_003888.3	RefSeq	ribosome_entry_site	4911056	4911059	.	+	.	ID=id5645;Dbxref=GeneID:1099930;gbkey=RBS;gene=SCD69.10
NC_003888.3	RefSeq	gene	4911068	4911973	.	+	.	ID=gene4538;Dbxref=GeneID:1099931;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;gene_synonym=SCD69.11;locus_tag=SCO4491
NC_003888.3	RefSeq	CDS	4911068	4911973	.	+	0	ID=cds4443;Parent=gene4538;Dbxref=Genbank:NP_628656.1,GeneID:1099931;Name=NP_628656.1;Note=UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones%2C hemes%2C chlorophylls%2C vitamin E%2C and shikonin;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=NP_628656.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4911158	4911952	.	+	.	ID=id5646;Dbxref=GeneID:1099931;Note=Pfam match to entry PF01040 UbiA%2C UbiA prenyltransferase family%2C score 225.30%2C E-value 8.9e-64;gbkey=misc_feature;gene=ubiA
NC_003888.3	RefSeq	gene	4912029	4912679	.	+	.	ID=gene4539;Dbxref=GeneID:1099932;Name=SCD69.12;gbkey=Gene;gene=SCD69.12;gene_biotype=protein_coding;gene_synonym=SCD69.12;locus_tag=SCO4492
NC_003888.3	RefSeq	CDS	4912029	4912679	.	+	0	ID=cds4444;Parent=gene4539;Dbxref=Genbank:NP_628657.1,GeneID:1099932;Name=NP_628657.1;Note=SCD69.12%2C probable octaprenyl carboxylase%2C len: 216 aa%3B similar to TR:P72743 (EMBL:D90900) Synechocystis sp. 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX%2C 206 aa%3B fasta scores: opt: 446 z-score: 524.1 E(): 9.9e-22%3B 40.3%25 identity in 211 aa overlap and to SW:UBIX_ECOLI (EMBL:M68935) Escherichia coli 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX%2C 189 aa%3B fasta scores: opt: 306 z-score: 363.7 E(): 8.5e-13%3B 38.2%25 identity in 207 aa overlap;gbkey=CDS;gene=SCD69.12;product=octaprenyl carboxylase;protein_id=NP_628657.1;transl_table=11
NC_003888.3	RefSeq	gene	4912701	4913204	.	+	.	ID=gene4540;Dbxref=GeneID:1099933;Name=SCD69.13;gbkey=Gene;gene=SCD69.13;gene_biotype=protein_coding;gene_synonym=SCD69.13;locus_tag=SCO4493
NC_003888.3	RefSeq	CDS	4912701	4913204	.	+	0	ID=cds4445;Parent=gene4540;Dbxref=Genbank:NP_628658.1,GeneID:1099933;Name=NP_628658.1;Note=SCD69.13%2C probable asnC-family transcriptional regulator%2C len: 167 aa%3B similar to SW:LRPC_BACSU (EMBL:AB001488) Bacillus subtilis transcriptional regulator LrpC%2C 144 aa%3B fasta scores: opt: 249 z-score: 304.8 E(): 1.6e-09%3B 36.0%25 identity in 125 aa overlap. Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family and match to Prosite entry PS00519 Bacterial regulatory proteins%2C asnC family signature. Contains a possible helix-turn-helix motif at residues 33..45 (+2.79 SD) and also a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCD69.13;product=transcription regulator AsnC;protein_id=NP_628658.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4912704	4912706	.	+	.	ID=id5647;Dbxref=GeneID:1099933;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD69.13
NC_003888.3	RefSeq	sequence_feature	4912800	4912880	.	+	.	ID=id5648;Dbxref=GeneID:1099933;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature;gbkey=misc_feature;gene=SCD69.13
NC_003888.3	RefSeq	sequence_feature	4912818	4913120	.	+	.	ID=id5649;Dbxref=GeneID:1099933;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 110.00%2C E-value 4.6e-29;gbkey=misc_feature;gene=SCD69.13
NC_003888.3	RefSeq	ribosome_entry_site	4913239	4913242	.	+	.	ID=id5650;gbkey=RBS
NC_003888.3	RefSeq	gene	4913249	4914412	.	+	.	ID=gene4541;Dbxref=GeneID:1099934;Name=SCD35.01;gbkey=Gene;gene=SCD35.01;gene_biotype=protein_coding;gene_synonym=SCD35.01,SCD69.14;locus_tag=SCO4494
NC_003888.3	RefSeq	CDS	4913249	4914412	.	+	0	ID=cds4446;Parent=gene4541;Dbxref=Genbank:NP_733640.1,GeneID:1099934;Name=NP_733640.1;Note=SCD35.01%2C unknown%2C len: >95 aa~SCD69.14%2C conserved hypothetical protein (fragment)%2C len: >358 aa%3B similar to TR:AAF09948 (EMBL:AE001897) Deinococcus radiodurans conserved hypothetical protein DR0366%2C 376 aa%3B fasta scores: opt: 896 z-score: 1100.7 E(): 0%3B 39.8%25 identity in 357 aa overlap;gbkey=CDS;gene=SCD35.01;product=hypothetical protein;protein_id=NP_733640.1;transl_table=11
NC_003888.3	RefSeq	gene	4914637	4915275	.	+	.	ID=gene4542;Dbxref=GeneID:1099935;Name=SCD35.02;gbkey=Gene;gene=SCD35.02;gene_biotype=protein_coding;gene_synonym=SCD35.02;locus_tag=SCO4495
NC_003888.3	RefSeq	CDS	4914637	4915275	.	+	0	ID=cds4447;Parent=gene4542;Dbxref=Genbank:NP_628659.1,GeneID:1099935;Name=NP_628659.1;Note=SCD35.02%2C possible DNA polymerase related protein%2C len: 212 aa%3B similar to TR:AAF11304 (EMBL:AE002016) Deinococcus radiodurans DNA polymerase-related protein DR1751%2C 237 aa%3B fasta scores: opt: 380 z-score: 451.4 E(): 1e-1%3B 41.5%25 identity in 188 aa overlap and to N-terminal region of SW:DPOL_BPSP1 (EMBL:M84415) Bacteriophage SP01 DNA polymerase (EC 2.7.7.7) 31%2C 924 aa%3B fasta scores: opt: 191 z-score: 223.4 E(): 5.2e-05%3B 33.7%25 identity in 169 aa overlap;gbkey=CDS;gene=SCD35.02;product=DNA polymerase-like protein;protein_id=NP_628659.1;transl_table=11
NC_003888.3	RefSeq	gene	4915292	4915816	.	+	.	ID=gene4543;Dbxref=GeneID:1099936;Name=SCD35.03;gbkey=Gene;gene=SCD35.03;gene_biotype=protein_coding;gene_synonym=SCD35.03;locus_tag=SCO4496
NC_003888.3	RefSeq	CDS	4915292	4915816	.	+	0	ID=cds4448;Parent=gene4543;Dbxref=Genbank:NP_628660.1,GeneID:1099936;Name=NP_628660.1;Note=SCD35.03%2C possible acetyltransferase%2C len: 174 aa%3B similar to TR:CAB71250 (EMBL:AL138598) Streptomyces coelicolor  acetyltransferase SC1A2.12%2C 181 aa%3B fasta scores: opt: 214 z-score: 278.1 E(): 4.6e-08%3B 32.9%25 identity in 149 aa overlap and to SW:TTR_PSESY (EMBL:X17150) Pseudomonas syringae (pv. syringae) acetyltransferase (EC 2.3.1.-) Ttr%2C 17 aa%3B fasta scores: opt: 137 z-score: 182.0 E(): 0.01%3B 28.3%25 identity in 138 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCD35.03;product=acetyltransferase;protein_id=NP_628660.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4915313	4915732	.	+	.	ID=id5651;Dbxref=GeneID:1099936;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 33.50%2C E-value 4.9e-06;gbkey=misc_feature;gene=SCD35.03
NC_003888.3	RefSeq	gene	4915937	4916236	.	+	.	ID=gene4544;Dbxref=GeneID:1099937;Name=SCD35.04;gbkey=Gene;gene=SCD35.04;gene_biotype=protein_coding;gene_synonym=SCD35.04;locus_tag=SCO4497
NC_003888.3	RefSeq	CDS	4915937	4916236	.	+	0	ID=cds4449;Parent=gene4544;Dbxref=Genbank:NP_628661.1,GeneID:1099937;Name=NP_628661.1;Note=SCD35.04%2C possible membrane protein%2C len: 297 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD35.04;product=hypothetical protein;protein_id=NP_628661.1;transl_table=11
NC_003888.3	RefSeq	gene	4916551	4917873	.	+	.	ID=gene4545;Dbxref=GeneID:1099938;Name=SCD35.05;gbkey=Gene;gene=SCD35.05;gene_biotype=protein_coding;gene_synonym=SCD35.05;locus_tag=SCO4498
NC_003888.3	RefSeq	CDS	4916551	4917873	.	+	0	ID=cds4450;Parent=gene4545;Dbxref=Genbank:NP_628662.1,GeneID:1099938;Name=NP_628662.1;Note=SCD35.05%2C probable proton transport protein%2C len: 440 aa%3B similar to TR:Q54104 (EMBL:X92556) Saccharopolyspora erythraea similar to GltP glutamate transporters HgtA%2C 449 aa%3B fasta scores: opt: 1339 z-score: 1482.7 E(): 0%3B 50.2%25 identity in 422 aa overlap and to SW:GLTP_BACSU (EMBL:U15147) Bacillus subtilis proton glutamate symport protein (glutamate-aspartate carrier protein) GltP%2C 414 aa%3B fasta scores: opt: 684 z-score: 760.6 E(): 0%3B 28.9%25 identity in 409 aa overlap. Contains Pfam match to entry PF00375 SDF%2C Sodium:dicarboxylate symporter family and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD35.05;product=proton transport protein;protein_id=NP_628662.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4916599	4917768	.	+	.	ID=id5652;Dbxref=GeneID:1099938;Note=Pfam match to entry PF00375 SDF%2C Sodium:dicarboxylate symporter family%2C score 287.90%2C E-value 1.3e-82;gbkey=misc_feature;gene=SCD35.05
NC_003888.3	RefSeq	gene	4917934	4918656	.	+	.	ID=gene4546;Dbxref=GeneID:1099939;Name=SCD35.06;gbkey=Gene;gene=SCD35.06;gene_biotype=protein_coding;gene_synonym=SCD35.06;locus_tag=SCO4499
NC_003888.3	RefSeq	CDS	4917934	4918656	.	+	0	ID=cds4451;Parent=gene4546;Dbxref=Genbank:NP_628663.1,GeneID:1099939;Name=NP_628663.1;Note=SCD35.06%2C probable tetR-family regulatory protein%2C len: 240 aa%3B similar to TR:O53661 (EMBL:AL021929) Mycobacterium tuberculosis regulatory protein MTV034.04%2C 204 aa%3B fast scores: opt: 447 z-score: 507.8 E(): 7.5e-21%3B 41.4%25 identity in 198 aa overlap and to SW:MTRR_NEIGO (EMBL:Z25797) Neisseria gonorrhoeae regulatory protien MtrR%2C 210 aa%3B fasta scores: opt: 164 z-score: 193.8 E(): 0.0023%3B 28.3%25 identity in 159 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 34..55 (+3.38 SD);gbkey=CDS;gene=SCD35.06;product=TetR family transcriptional regulator;protein_id=NP_628663.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4917985	4918125	.	+	.	ID=id5653;Dbxref=GeneID:1099939;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.00%2C E-value 9.4e-11;gbkey=misc_feature;gene=SCD35.06
NC_003888.3	RefSeq	gene	4919005	4919880	.	-	.	ID=gene4547;Dbxref=GeneID:1099940;Name=SCD35.07c;gbkey=Gene;gene=SCD35.07c;gene_biotype=protein_coding;gene_synonym=SCD35.07c;locus_tag=SCO4500
NC_003888.3	RefSeq	CDS	4919005	4919880	.	-	0	ID=cds4452;Parent=gene4547;Dbxref=Genbank:NP_628664.1,GeneID:1099940;Name=NP_628664.1;Note=SCD35.07c%2C possible dehydratase%2C len: 291 aa%3B similar to TR:Q04846 (EMBL:X64795) Corynebacterium ammoniagenes fatty acid synthase (EC 2.3.1.85)%2C Fas%2C 3104 aa%2C 3-hydroxydecanoyl beta%2C gamma-dehydratase domain (315 aa)%3B fasta scores: opt: 155 z-score: 164.5 E(): 0.098%3B 26.9%25 identity in 264 aa overlap. Contains Pfam match to entry PF01575 MaoC_like%2C MaoC like domain;gbkey=CDS;gene=SCD35.07c;product=dehydratase;protein_id=NP_628664.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4919008	4919388	.	-	.	ID=id5654;Dbxref=GeneID:1099940;Note=Pfam match to entry PF01575 MaoC_like%2C MaoC like domain%2C score 34.10%2C E-value 3.1e-06;gbkey=misc_feature;gene=SCD35.07c
NC_003888.3	RefSeq	gene	4919880	4921172	.	-	.	ID=gene4548;Dbxref=GeneID:1099941;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;gene_synonym=SCD35.08c;locus_tag=SCO4501
NC_003888.3	RefSeq	CDS	4919880	4921172	.	-	0	ID=cds4453;Parent=gene4548;Dbxref=Genbank:NP_628665.1,GeneID:1099941;Name=NP_628665.1;Note=Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=NP_628665.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4919907	4919990	.	-	.	ID=id5655;Dbxref=GeneID:1099941;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 21.90%2C E-value 0.00019;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	4920057	4920596	.	-	.	ID=id5656;Dbxref=GeneID:1099941;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 175.00%2C E-value 1.2e-48;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	4920123	4920209	.	-	.	ID=id5657;Dbxref=GeneID:1099941;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	sequence_feature	4920651	4920701	.	-	.	ID=id5658;Dbxref=GeneID:1099941;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 19.20%2C E-value 0.0011;gbkey=misc_feature;gene=fabG
NC_003888.3	RefSeq	ribosome_entry_site	4921178	4921182	.	-	.	ID=id5659;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4921322	4921325	.	+	.	ID=id5660;gbkey=RBS
NC_003888.3	RefSeq	gene	4921335	4922621	.	+	.	ID=gene4549;Dbxref=GeneID:1099942;Name=SCD35.09;gbkey=Gene;gene=SCD35.09;gene_biotype=protein_coding;gene_synonym=SCD35.09;locus_tag=SCO4502
NC_003888.3	RefSeq	CDS	4921335	4922621	.	+	0	ID=cds4454;Parent=gene4549;Dbxref=Genbank:NP_628666.1,GeneID:1099942;Name=NP_628666.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;gbkey=CDS;gene=SCD35.09;product=acetyl-CoA acetyltransferase;protein_id=NP_628666.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4921359	4922618	.	+	.	ID=id5661;Dbxref=GeneID:1099942;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2C score 289.50%2C E-value 4.2e-83;gbkey=misc_feature;gene=SCD35.09
NC_003888.3	RefSeq	ribosome_entry_site	4923020	4923024	.	+	.	ID=id5662;gbkey=RBS
NC_003888.3	RefSeq	gene	4923031	4924959	.	+	.	ID=gene4550;Dbxref=GeneID:1099943;Name=SCD35.10;gbkey=Gene;gene=SCD35.10;gene_biotype=protein_coding;gene_synonym=SCD35.10;locus_tag=SCO4503
NC_003888.3	RefSeq	CDS	4923031	4924959	.	+	0	ID=cds4455;Parent=gene4550;Dbxref=Genbank:NP_628667.1,GeneID:1099943;Name=NP_628667.1;Note=SCD35.10%2C probable long-chain-fatty acid CoA ligase%2C len: 642 aa%3B similar to TR:Q9ZBW6 (EMBL:AL034443) Streptomyces coelicolor  long-chain-fatty acid CoA ligase SC4B5.02c%2C 608 aa%3B fasta scores: opt: 2125 z-score: 2339.4 E(): 0%3B 53.0%25 identity in 610 aa overlap and to SW:LCFE_RAT (EMBL:AB012933) Rattus norvegicus long-chain-fatty acid CoA ligase 5 (EC 6.2.1.3) FacL5%2C 683 aa%3B fasta scores: opt: 488 z-score: 536.4 E(): 1.9e-22%3B 27.3%25 identity in 607 aa overlap. Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and match to Prosite entry PS00455  AMP-binding domain signature;gbkey=CDS;gene=SCD35.10;product=long-chain-fatty acid CoA ligase;protein_id=NP_628667.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4923271	4924641	.	+	.	ID=id5663;Dbxref=GeneID:1099943;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score -94.30%2C E-value 3.7e-10;gbkey=misc_feature;gene=SCD35.10
NC_003888.3	RefSeq	sequence_feature	4923679	4923714	.	+	.	ID=id5664;Dbxref=GeneID:1099943;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SCD35.10
NC_003888.3	RefSeq	gene	4924984	4925628	.	-	.	ID=gene4551;Dbxref=GeneID:1099944;Name=SCD35.11c;gbkey=Gene;gene=SCD35.11c;gene_biotype=protein_coding;gene_synonym=SCD35.11c;locus_tag=SCO4504
NC_003888.3	RefSeq	CDS	4924984	4925628	.	-	0	ID=cds4456;Parent=gene4551;Dbxref=Genbank:NP_628668.1,GeneID:1099944;Name=NP_628668.1;Note=SCD35.11c%2C possible methyltransferase%2C len: 241 aa%3B similar to TR:CAB61165 (EMBL:AL132973) Streptomyces coelicolor  methyltransferase SCF91.08%2C 231 aa%3B fasta scores: opt: 214 z-score: 264.5 E(): 2.7e-07%3B 29.1%25 identity in 206 aa overlap and to SW:BIOC_SERMA (EMBL:D17468) Serratia marcescens biotin synthesis protein BioC%2C 255 aa%3B fasta scores: opt: 179 z-score: 222.0 E(): 6.2e-05%3B 34.0%25 identity in 100 aa overlap;gbkey=CDS;gene=SCD35.11c;product=methyltransferase;protein_id=NP_628668.1;transl_table=11
NC_003888.3	RefSeq	gene	4925750	4925953	.	-	.	ID=gene4552;Dbxref=GeneID:1099945;Name=SCD35.12c;gbkey=Gene;gene=SCD35.12c;gene_biotype=protein_coding;gene_synonym=SCD35.12c,scoF2;locus_tag=SCO4505
NC_003888.3	RefSeq	CDS	4925750	4925953	.	-	0	ID=cds4457;Parent=gene4552;Dbxref=Genbank:NP_628669.1,GeneID:1099945;Name=NP_628669.1;Note=SCD35.12c%2C scoF2%2C cold shock protein%2C len: 67 aa%3B highly similar to SW:CSP7_STRCL (EMBL:X68245) Streptomyces clavuligerus cold shock-like protein 7.0 SC7.0%2C 66 aa%3B fasta scores: opt: 389 z-score: 532.0 E(): 3.3e-22%3B 87.9%25 identity in 66 aa overlap and to SW:CSPF_STRCO (EMBL:X92686) Streptomyces coelicolor cold shock protein ScoF%2C 67 aa%3B fasta scores: opt: 384 z-score: 525.4 E(): 7.8e-22%3B 78.8%25 identity in 66 aa overlap. Contains PS00352 'Cold-shock' DNA-binding domain signature;gbkey=CDS;gene=SCD35.12c;product=cold shock protein;protein_id=NP_628669.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4925753	4925953	.	-	.	ID=id5665;Dbxref=GeneID:1099945;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 154.80%2C E-value 1.5e-42;gbkey=misc_feature;gene=SCD35.12c
NC_003888.3	RefSeq	sequence_feature	4925852	4925911	.	-	.	ID=id5666;Dbxref=GeneID:1099945;Note=PS00352 'Cold-shock' DNA-binding domain signature;gbkey=misc_feature;gene=SCD35.12c
NC_003888.3	RefSeq	ribosome_entry_site	4925958	4925963	.	-	.	ID=id5667;gbkey=RBS
NC_003888.3	RefSeq	gene	4926246	4927094	.	+	.	ID=gene4553;Dbxref=GeneID:1099946;Name=SCD35.13;gbkey=Gene;gene=SCD35.13;gene_biotype=protein_coding;gene_synonym=SCD35.13;locus_tag=SCO4506
NC_003888.3	RefSeq	CDS	4926246	4927094	.	+	0	ID=cds4458;Parent=gene4553;Dbxref=Genbank:NP_628670.1,GeneID:1099946;Name=NP_628670.1;Note=SCD35.13%2C conserved hypothetical protein%2C len: 282 aa%3B similar to various hypothetical proteins e.g. TR:P94301 (EMBL:U61168) Bacillus firmus hypothetical 32.2 kD protein%2C 281 aa%3B fasta scores: opt: 398 z-score: 495.8 E(): 3.5e-20%3B 31.1%25 identity in 244 aa overlap;gbkey=CDS;gene=SCD35.13;product=hypothetical protein;protein_id=NP_628670.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4927155	4927159	.	+	.	ID=id5668;gbkey=RBS
NC_003888.3	RefSeq	gene	4927170	4928930	.	+	.	ID=gene4554;Dbxref=GeneID:1099947;Name=SCD35.14;gbkey=Gene;gene=SCD35.14;gene_biotype=protein_coding;gene_synonym=SCD35.14;locus_tag=SCO4507
NC_003888.3	RefSeq	CDS	4927170	4928930	.	+	0	ID=cds4459;Parent=gene4554;Dbxref=Genbank:NP_628671.1,GeneID:1099947;Name=NP_628671.1;Note=SCD35.14%2C probable Ser/Thr protein kinase%2C len: 568 aa%3B similar to TR:Q9XAI1 (EMBL:AL079348) Streptomyces coelicolor  Ser/Thr protein kinase SC66T3.32c%2C 783 aa%3B fasta scores: opt: 1187 z-score: 836.4 E(): 0%3B 46.3%25 identity in 510 aa overlap and to SW:AFSK_STRCO (EMBL:D15062) Streptomyces coelicolor Ser/Thr protein kinase AfsK (EC 2.7.1.-)%2C 799 aa%3B fasta scores: opt: 662 z-score: 472.7 E(): 6.7e-19%3B 41.8%25 identity in 481 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature;gbkey=CDS;gene=SCD35.14;product=Ser/Thr protein kinase;protein_id=NP_628671.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4927212	4927964	.	+	.	ID=id5669;Dbxref=GeneID:1099947;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 144.60%2C E-value 1.7e-39;gbkey=misc_feature;gene=SCD35.14
NC_003888.3	RefSeq	sequence_feature	4927230	4927298	.	+	.	ID=id5670;Dbxref=GeneID:1099947;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCD35.14
NC_003888.3	RefSeq	sequence_feature	4927566	4927604	.	+	.	ID=id5671;Dbxref=GeneID:1099947;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SCD35.14
NC_003888.3	RefSeq	gene	4928991	4933568	.	-	.	ID=gene4555;Dbxref=GeneID:1099948;Name=SCD35.15c;gbkey=Gene;gene=SCD35.15c;gene_biotype=protein_coding;gene_synonym=SCD35.15c;locus_tag=SCO4508
NC_003888.3	RefSeq	CDS	4928991	4933568	.	-	0	ID=cds4460;Parent=gene4555;Dbxref=Genbank:NP_628672.1,GeneID:1099948;Name=NP_628672.1;Note=SCD35.15%2C possible cell division-related protein%2C len: 1525 aa%3B similar to TR:P71068 (EMBL:Z99120) Bacillus subtilis YukA protein%2C 1207 aa%3B fasta scores: opt: 682 z-score: 717.6 E(): 1.5e-32%3B 23.7%25 identity in 1288 aa overlap and C-terminal region similar to TR:O25722 (EMBL:AE000615) Helicobacter pylori (Campylobacter pylori) cell division protein (FtsK)%2C 858 aa%3B fasta scores: opt: 347 z-score: 364.2 E(): 7.4e-13%3B 33.1%25 identity in 245 aa overlap. Contains two Pfam matches to entry PF01580 FtsK_SpoIIIE%2C FtsK/SpoIIIE family and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD35.15c;product=cell division-like protein;protein_id=NP_628672.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4929942	4930547	.	-	.	ID=id5672;Dbxref=GeneID:1099948;Note=Pfam match to entry PF01580 FtsK_SpoIIIE%2C FtsK/SpoIIIE family%2C score 95.30%2C E-value 1.2e-24;gbkey=misc_feature;gene=SCD35.15c
NC_003888.3	RefSeq	sequence_feature	4930977	4931561	.	-	.	ID=id5673;Dbxref=GeneID:1099948;Note=Pfam match to entry PF01580 FtsK_SpoIIIE%2C FtsK/SpoIIIE family%2C score 136.70%2C E-value 4.2e-37;gbkey=misc_feature;gene=SCD35.15c
NC_003888.3	RefSeq	sequence_feature	4931403	4931426	.	-	.	ID=id5674;Dbxref=GeneID:1099948;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD35.15c
NC_003888.3	RefSeq	ribosome_entry_site	4933574	4933579	.	-	.	ID=id5675;gbkey=RBS
NC_003888.3	RefSeq	gene	4933782	4934156	.	+	.	ID=gene4556;Dbxref=GeneID:1099949;Name=SCD35.16;gbkey=Gene;gene=SCD35.16;gene_biotype=protein_coding;gene_synonym=SCD35.16;locus_tag=SCO4509
NC_003888.3	RefSeq	CDS	4933782	4934156	.	+	0	ID=cds4461;Parent=gene4556;Dbxref=Genbank:NP_628673.1,GeneID:1099949;Name=NP_628673.1;Note=SCD35.16%2C unknown%2C len: 124 aa. Contains possible coiled-coil region at aprox. residues 40..56;gbkey=CDS;gene=SCD35.16;product=hypothetical protein;protein_id=NP_628673.1;transl_table=11
NC_003888.3	RefSeq	gene	4934190	4934597	.	-	.	ID=gene4557;Dbxref=GeneID:1099950;Name=SCD35.17c;gbkey=Gene;gene=SCD35.17c;gene_biotype=protein_coding;gene_synonym=SCD35.17c;locus_tag=SCO4510
NC_003888.3	RefSeq	CDS	4934190	4934597	.	-	0	ID=cds4462;Parent=gene4557;Dbxref=Genbank:NP_628674.1,GeneID:1099950;Name=NP_628674.1;Note=SCD35.17c%2C unknown%2C len: 135 aa;gbkey=CDS;gene=SCD35.17c;product=hypothetical protein;protein_id=NP_628674.1;transl_table=11
NC_003888.3	RefSeq	gene	4934688	4935107	.	-	.	ID=gene4558;Dbxref=GeneID:1099951;Name=SCD35.18c;gbkey=Gene;gene=SCD35.18c;gene_biotype=protein_coding;gene_synonym=SCD35.18c;locus_tag=SCO4511
NC_003888.3	RefSeq	CDS	4934688	4935107	.	-	0	ID=cds4463;Parent=gene4558;Dbxref=Genbank:NP_628675.1,GeneID:1099951;Name=NP_628675.1;Note=SCD35.18c%2C possible integral membrane protein%2C len: 139 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD35.18c;product=hypothetical protein;protein_id=NP_628675.1;transl_table=11
NC_003888.3	RefSeq	gene	4935104	4935685	.	-	.	ID=gene4559;Dbxref=GeneID:1099952;Name=SCD35.19c;gbkey=Gene;gene=SCD35.19c;gene_biotype=protein_coding;gene_synonym=SCD35.19c;locus_tag=SCO4512
NC_003888.3	RefSeq	CDS	4935104	4935685	.	-	0	ID=cds4464;Parent=gene4559;Dbxref=Genbank:NP_628676.1,GeneID:1099952;Name=NP_628676.1;Note=SCD35.19c%2C unknown%2C len: 193 aa;gbkey=CDS;gene=SCD35.19c;product=hypothetical protein;protein_id=NP_628676.1;transl_table=11
NC_003888.3	RefSeq	gene	4935682	4936350	.	-	.	ID=gene4560;Dbxref=GeneID:1099953;Name=SCD35.20c;gbkey=Gene;gene=SCD35.20c;gene_biotype=protein_coding;gene_synonym=SCD35.20c;locus_tag=SCO4513
NC_003888.3	RefSeq	CDS	4935682	4936350	.	-	0	ID=cds4465;Parent=gene4560;Dbxref=Genbank:NP_628677.1,GeneID:1099953;Name=NP_628677.1;Note=SCD35.20c%2C unknown%2C len: 222 aa;gbkey=CDS;gene=SCD35.20c;product=hypothetical protein;protein_id=NP_628677.1;transl_table=11
NC_003888.3	RefSeq	gene	4936347	4936925	.	-	.	ID=gene4561;Dbxref=GeneID:1099954;Name=SCD35.21c;gbkey=Gene;gene=SCD35.21c;gene_biotype=protein_coding;gene_synonym=SCD35.21c;locus_tag=SCO4514
NC_003888.3	RefSeq	CDS	4936347	4936925	.	-	0	ID=cds4466;Parent=gene4561;Dbxref=Genbank:NP_628678.1,GeneID:1099954;Name=NP_628678.1;Note=SCD35.21c%2C possible integral membrane protein%2C len: 192 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD35.21c;product=hypothetical protein;protein_id=NP_628678.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4936361	4936364	.	-	.	ID=id5676;Dbxref=GeneID:1099954;gbkey=RBS;gene=SCD35.21c
NC_003888.3	RefSeq	ribosome_entry_site	4936935	4936939	.	-	.	ID=id5677;gbkey=RBS
NC_003888.3	RefSeq	gene	4936959	4938164	.	-	.	ID=gene4562;Dbxref=GeneID:1099955;Name=SCD35.22c;gbkey=Gene;gene=SCD35.22c;gene_biotype=protein_coding;gene_synonym=SCD35.22c;locus_tag=SCO4515
NC_003888.3	RefSeq	CDS	4936959	4938164	.	-	0	ID=cds4467;Parent=gene4562;Dbxref=Genbank:NP_628679.1,GeneID:1099955;Name=NP_628679.1;Note=SCD35.22c%2C hypothetical protein%2C len: 401 aa%3B similar to TR:Q9XD98 (EMBL:AF106004) Streptomyces coelicolor hypothetical 27.5 kD protein%2C 249 aa%3B fasta scores: opt: 190 z-score: 190.8 E(): 0.0034%3B 26.8%25 identity in 190 aa overlap and to TR:Q9F3G6 (EMBL:AL392175) Streptomyces coelicolor membrane protein 2SCD4.05%2C 474 aa%3B fasta scores: opt: 583 Z-score: 556.4 E(): 2.3e-23%3B 36.422%25 identity in 313 aa overlap. Contains possible hydrophobic membrane spanning regions and also possible colied-coil region ar aprox. residues 104..127;gbkey=CDS;gene=SCD35.22c;product=hypothetical protein;protein_id=NP_628679.1;transl_table=11
NC_003888.3	RefSeq	gene	4938161	4938520	.	-	.	ID=gene4563;Dbxref=GeneID:1099956;Name=SCD35.23c;gbkey=Gene;gene=SCD35.23c;gene_biotype=protein_coding;gene_synonym=SCD35.23c;locus_tag=SCO4516
NC_003888.3	RefSeq	CDS	4938161	4938520	.	-	0	ID=cds4468;Parent=gene4563;Dbxref=Genbank:NP_628680.1,GeneID:1099956;Name=NP_628680.1;Note=SCD35.23c%2C unknown%2C len: 119 aa;gbkey=CDS;gene=SCD35.23c;product=hypothetical protein;protein_id=NP_628680.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4938166	4938171	.	-	.	ID=id5678;Dbxref=GeneID:1099956;gbkey=RBS;gene=SCD35.23c
NC_003888.3	RefSeq	gene	4938790	4939515	.	-	.	ID=gene4564;Dbxref=GeneID:1099957;Name=SCD35.24c;gbkey=Gene;gene=SCD35.24c;gene_biotype=protein_coding;gene_synonym=SCD35.24c;locus_tag=SCO4517
NC_003888.3	RefSeq	CDS	4938790	4939515	.	-	0	ID=cds4469;Parent=gene4564;Dbxref=Genbank:NP_628681.1,GeneID:1099957;Name=NP_628681.1;Note=SCD35.24c%2C hypothetical protein%2C len: 241 aa%3B C-terminal region similar to TR:Q9KYA0 (EMBL:AL356813) Streptomyces coelicolor conserved hypothetical protein SCK15.04c%2C 216 aa%3B fasta scores: opt: 613 Z-score: 714.3 E(): 3.8e-32%3B 52.792%25 identity in 197 aa overlap;gbkey=CDS;gene=SCD35.24c;product=hypothetical protein;protein_id=NP_628681.1;transl_table=11
NC_003888.3	RefSeq	gene	4939512	4940861	.	-	.	ID=gene4565;Dbxref=GeneID:1099958;Name=SCD35.25c;gbkey=Gene;gene=SCD35.25c;gene_biotype=protein_coding;gene_synonym=SCD35.25c;locus_tag=SCO4518
NC_003888.3	RefSeq	CDS	4939512	4940861	.	-	0	ID=cds4470;Parent=gene4565;Dbxref=Genbank:NP_628682.1,GeneID:1099958;Name=NP_628682.1;Note=SCD35.25c%2C possible integral membrane protein%2C len: 449 aa. Contains possible hydrophobic membrane spanning regions and possible colied-coil region at aprox. residues 82..110;gbkey=CDS;gene=SCD35.25c;product=hypothetical protein;protein_id=NP_628682.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4940869	4940872	.	-	.	ID=id5679;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4940956	4940960	.	+	.	ID=id5680;gbkey=RBS
NC_003888.3	RefSeq	gene	4940966	4941562	.	+	.	ID=gene4566;Dbxref=GeneID:1099959;Name=SCD35.26;gbkey=Gene;gene=SCD35.26;gene_biotype=protein_coding;gene_synonym=SCD35.26;locus_tag=SCO4519
NC_003888.3	RefSeq	CDS	4940966	4941562	.	+	0	ID=cds4471;Parent=gene4566;Dbxref=Genbank:NP_628683.1,GeneID:1099959;Name=NP_628683.1;Note=SCD35.26%2C possible integral membrane protein%2C len: 198 aa%3B similar to TR:Q9KYA1 (EMBL:AL356813) integral membrane protein SCK15.03 from Streptomyces coelicolor (213 aa) fasta scores%3B opt: 349%2C Z-score: 400.7%2C E(): 1.1e-14%2C 37.363%25 identity (37.989%25 ungapped) in 182 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD35.26;product=hypothetical protein;protein_id=NP_628683.1;transl_table=11
NC_003888.3	RefSeq	gene	4941567	4941872	.	-	.	ID=gene4567;Dbxref=GeneID:1099960;Name=SCD35.27c;gbkey=Gene;gene=SCD35.27c;gene_biotype=protein_coding;gene_synonym=SCD35.27c;locus_tag=SCO4520
NC_003888.3	RefSeq	CDS	4941567	4941872	.	-	0	ID=cds4472;Parent=gene4567;Dbxref=Genbank:NP_628684.1,GeneID:1099960;Name=NP_628684.1;Note=SCD35.27c%2C hypothetical protein%2C len: 101 aa%3B similar to TR:Q9KYA2 (EMBL:AL356813) Streptomyces coelicolor conserved hypothetical protein SCK15.02%2C 102 aa%3B fasta scores: opt: 471 Z-score: 568.2 E(): 5.2e-24%3B 73.684%25 identity in 95 aa overlap;gbkey=CDS;gene=SCD35.27c;product=hypothetical protein;protein_id=NP_628684.1;transl_table=11
NC_003888.3	RefSeq	gene	4941895	4942980	.	-	.	ID=gene4568;Dbxref=GeneID:1099961;Name=SCD35.28c;gbkey=Gene;gene=SCD35.28c;gene_biotype=protein_coding;gene_synonym=SCD35.28c;locus_tag=SCO4521
NC_003888.3	RefSeq	CDS	4941895	4942980	.	-	0	ID=cds4473;Parent=gene4568;Dbxref=Genbank:NP_628685.1,GeneID:1099961;Name=NP_628685.1;Note=SCD35.28c%2C possible hypothetical protein%2C len: 361 aa%3B similar to TR:Q9F3F6 (EMBL:AL392175) Streptomyces coelicolor  hypothetical protein 2SCD4.18%2C 355 aa%3B fasta scores: opt: 942 Z-score: 1049.8 E(): 7.7e-51%3B 43.296%25 identity. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD35.28c;product=hypothetical protein;protein_id=NP_628685.1;transl_table=11
NC_003888.3	RefSeq	gene	4942977	4943453	.	-	.	ID=gene4569;Dbxref=GeneID:1099962;Name=SCD35.29c;gbkey=Gene;gene=SCD35.29c;gene_biotype=protein_coding;gene_synonym=SCD35.29c;locus_tag=SCO4522
NC_003888.3	RefSeq	CDS	4942977	4943453	.	-	0	ID=cds4474;Parent=gene4569;Dbxref=Genbank:NP_628686.1,GeneID:1099962;Name=NP_628686.1;Note=SCD35.29c%2C unknown%2C len: 158 aa;gbkey=CDS;gene=SCD35.29c;product=hypothetical protein;protein_id=NP_628686.1;transl_table=11
NC_003888.3	RefSeq	gene	4943703	4944296	.	+	.	ID=gene4570;Dbxref=GeneID:1099963;Name=SCD35.30;gbkey=Gene;gene=SCD35.30;gene_biotype=protein_coding;gene_synonym=SCD35.30;locus_tag=SCO4523
NC_003888.3	RefSeq	CDS	4943703	4944296	.	+	0	ID=cds4475;Parent=gene4570;Dbxref=Genbank:NP_628687.1,GeneID:1099963;Name=NP_628687.1;Note=SCD35.30%2C possible integral membrane protein%2C len: 197 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD35.30;product=hypothetical protein;protein_id=NP_628687.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4945115	4945118	.	+	.	ID=id5681;gbkey=RBS
NC_003888.3	RefSeq	gene	4945126	4945845	.	+	.	ID=gene4571;Dbxref=GeneID:1099964;Name=SCD35.31;gbkey=Gene;gene=SCD35.31;gene_biotype=protein_coding;gene_synonym=SCD35.31;locus_tag=SCO4524
NC_003888.3	RefSeq	CDS	4945126	4945845	.	+	0	ID=cds4476;Parent=gene4571;Dbxref=Genbank:NP_628688.1,GeneID:1099964;Name=NP_628688.1;Note=SCD35.31%2C membrane protein%2C len: 239 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD35.31;product=hypothetical protein;protein_id=NP_628688.1;transl_table=11
NC_003888.3	RefSeq	gene	4945864	4946745	.	+	.	ID=gene4572;Dbxref=GeneID:1099965;Name=SCD35.32;gbkey=Gene;gene=SCD35.32;gene_biotype=protein_coding;gene_synonym=SCD35.32;locus_tag=SCO4525
NC_003888.3	RefSeq	CDS	4945864	4946745	.	+	0	ID=cds4477;Parent=gene4572;Dbxref=Genbank:NP_628689.1,GeneID:1099965;Name=NP_628689.1;Note=SCD35.32%2C unknown%2C len: 293 aa. Contains match to Prosite entry PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=CDS;gene=SCD35.32;product=hypothetical protein;protein_id=NP_628689.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4946590	4946637	.	+	.	ID=id5682;Dbxref=GeneID:1099965;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=misc_feature;gene=SCD35.32
NC_003888.3	RefSeq	gene	4946742	4948049	.	+	.	ID=gene4573;Dbxref=GeneID:1099966;Name=SCD35.33;gbkey=Gene;gene=SCD35.33;gene_biotype=protein_coding;gene_synonym=SCD35.33;locus_tag=SCO4526
NC_003888.3	RefSeq	CDS	4946742	4948049	.	+	0	ID=cds4478;Parent=gene4573;Dbxref=Genbank:NP_628690.1,GeneID:1099966;Name=NP_628690.1;Note=SCD35.33%2C possible protein kinase%2C len: 435 aa%3B similar to TR:P94647 (EMBL:U77780) Chlorobium limicola secretory protein kinase Kbh%2C 474 aa%3B fasta scores: opt: 722 z-score: 805.0 E(): 0%3B 35.9%25 identity in 368 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD35.33;product=protein kinase;protein_id=NP_628690.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4947402	4947425	.	+	.	ID=id5683;Dbxref=GeneID:1099966;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD35.33
NC_003888.3	RefSeq	ribosome_entry_site	4948059	4948062	.	+	.	ID=id5684;gbkey=RBS
NC_003888.3	RefSeq	gene	4948063	4949100	.	+	.	ID=gene4574;Dbxref=GeneID:1099967;Name=SCD35.34;gbkey=Gene;gene=SCD35.34;gene_biotype=protein_coding;gene_synonym=SCD35.34;locus_tag=SCO4527
NC_003888.3	RefSeq	CDS	4948063	4949100	.	+	0	ID=cds4479;Parent=gene4574;Dbxref=Genbank:NP_628691.1,GeneID:1099967;Name=NP_628691.1;Note=SCD35.34%2C possible integral membrane protein%2C len: 345 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD35.34;product=hypothetical protein;protein_id=NP_628691.1;transl_table=11
NC_003888.3	RefSeq	gene	4949109	4950017	.	+	.	ID=gene4575;Dbxref=GeneID:1099968;Name=SCD35.35;gbkey=Gene;gene=SCD35.35;gene_biotype=protein_coding;gene_synonym=SCD35.35;locus_tag=SCO4528
NC_003888.3	RefSeq	CDS	4949109	4950017	.	+	0	ID=cds4480;Parent=gene4575;Dbxref=Genbank:NP_628692.1,GeneID:1099968;Name=NP_628692.1;Note=SCD35.35%2C possible integral membrane protein%2C len: 302 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD35.35;product=hypothetical protein;protein_id=NP_628692.1;transl_table=11
NC_003888.3	RefSeq	gene	4950014	4950367	.	+	.	ID=gene4576;Dbxref=GeneID:1099969;Name=SCD35.36;gbkey=Gene;gene=SCD35.36;gene_biotype=protein_coding;gene_synonym=SCD35.36;locus_tag=SCO4529
NC_003888.3	RefSeq	CDS	4950014	4950367	.	+	0	ID=cds4481;Parent=gene4576;Dbxref=Genbank:NP_628693.1,GeneID:1099969;Name=NP_628693.1;Note=SCD35.36%2C possible integral membrane protein%2C len: 117 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD35.36;product=hypothetical protein;protein_id=NP_628693.1;transl_table=11
NC_003888.3	RefSeq	gene	4950395	4950955	.	+	.	ID=gene4577;Dbxref=GeneID:1099970;Name=2SCD4.01;gbkey=Gene;gene=2SCD4.01;gene_biotype=protein_coding;gene_synonym=2SCD4.01,SCD35.37;locus_tag=SCO4530
NC_003888.3	RefSeq	CDS	4950395	4950955	.	+	0	ID=cds4482;Parent=gene4577;Dbxref=Genbank:NP_733641.1,GeneID:1099970;Name=NP_733641.1;Note=2SCD4.01%2C possible membrane protein (fragment)%2C len: >147 aa. Contains possible hydrophobic membrane spanning region~SCD35.37%2C unknown%2C len: >77 aa;gbkey=CDS;gene=2SCD4.01;product=hypothetical protein;protein_id=NP_733641.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4950938	4950944	.	+	.	ID=id5685;Dbxref=GeneID:1099970;gbkey=RBS;gene=2SCD4.01
NC_003888.3	RefSeq	gene	4950956	4951393	.	+	.	ID=gene4578;Dbxref=GeneID:1099971;Name=2SCD4.02;gbkey=Gene;gene=2SCD4.02;gene_biotype=protein_coding;gene_synonym=2SCD4.02;locus_tag=SCO4531
NC_003888.3	RefSeq	CDS	4950956	4951393	.	+	0	ID=cds4483;Parent=gene4578;Dbxref=Genbank:NP_628694.1,GeneID:1099971;Name=NP_628694.1;Note=2SCD4.02%2C possible septum determining protein%2C len: 145 aa%3B similar to TR:CAB92601 (EMBL:AL356813) Streptomyces coelicolor  septum determining protein MinD3%2C 131 aa%3B fasta scores: opt: 115 z-score: 155.7 E(): 0.33%3B 30.7%25 identity in 137 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCD4.02;product=septum determining protein;protein_id=NP_628694.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4951380	4951384	.	+	.	ID=id5686;Dbxref=GeneID:1099971;gbkey=RBS;gene=2SCD4.02
NC_003888.3	RefSeq	gene	4951390	4951851	.	+	.	ID=gene4579;Dbxref=GeneID:1099972;Name=2SCD4.03;gbkey=Gene;gene=2SCD4.03;gene_biotype=protein_coding;gene_synonym=2SCD4.03;locus_tag=SCO4532
NC_003888.3	RefSeq	CDS	4951390	4951851	.	+	0	ID=cds4484;Parent=gene4579;Dbxref=Genbank:NP_628695.1,GeneID:1099972;Name=NP_628695.1;Note=2SCD4.03%2C possible membrane protein%2C len: 153 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCD4.03;product=hypothetical protein;protein_id=NP_628695.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4951910	4951918	.	+	.	ID=id5687;gbkey=RBS
NC_003888.3	RefSeq	gene	4951930	4952256	.	+	.	ID=gene4580;Dbxref=GeneID:1099973;Name=2SCD4.04;gbkey=Gene;gene=2SCD4.04;gene_biotype=protein_coding;gene_synonym=2SCD4.04;locus_tag=SCO4533
NC_003888.3	RefSeq	CDS	4951930	4952256	.	+	0	ID=cds4485;Parent=gene4580;Dbxref=Genbank:NP_628696.1,GeneID:1099973;Name=NP_628696.1;Note=2SCD4.04%2C hypothetical protein%2C len: 108 aa%3B similar to TR:CAB77307 (EMBL:AL160312) Streptomyces coelicolor hypothetical 13.8 kDa protein SCD35.23c%2C 119 aa%3B fasta scores: opt: 290 z-score: 364.1 E(): 8.2e-13%3B 47.6%25 identity in 105 aa overlap;gbkey=CDS;gene=2SCD4.04;product=hypothetical protein;protein_id=NP_628696.1;transl_table=11
NC_003888.3	RefSeq	gene	4952253	4953677	.	+	.	ID=gene4581;Dbxref=GeneID:1099974;Name=2SCD4.05;gbkey=Gene;gene=2SCD4.05;gene_biotype=protein_coding;gene_synonym=2SCD4.05;locus_tag=SCO4534
NC_003888.3	RefSeq	CDS	4952253	4953677	.	+	0	ID=cds4486;Parent=gene4581;Dbxref=Genbank:NP_628697.1,GeneID:1099974;Name=NP_628697.1;Note=2SCD4.05%2C possible membrane protein%2C len: 474 aa%3B similar to TR:CAB77306 (EMBL:AL160312) Streptomyces coelicolor hypothetical 42.7 kDa protein SCD35.22c%2C 401 aa%3B fasta scores: opt: 583 z-score: 575.3 E(): 1.4e-24%3B 36.4%25 identity in 313 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCD4.05;product=hypothetical protein;protein_id=NP_628697.1;transl_table=11
NC_003888.3	RefSeq	gene	4953674	4955002	.	+	.	ID=gene4582;Dbxref=GeneID:1099975;Name=2SCD4.06;gbkey=Gene;gene=2SCD4.06;gene_biotype=protein_coding;gene_synonym=2SCD4.06;locus_tag=SCO4535
NC_003888.3	RefSeq	CDS	4953674	4955002	.	+	0	ID=cds4487;Parent=gene4582;Dbxref=Genbank:NP_628698.1,GeneID:1099975;Name=NP_628698.1;Note=2SCD4.06%2C possible integral membrane protein%2C len: 442 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCD4.06;product=hypothetical protein;protein_id=NP_628698.1;transl_table=11
NC_003888.3	RefSeq	gene	4954999	4955643	.	+	.	ID=gene4583;Dbxref=GeneID:1099976;Name=2SCD4.07;gbkey=Gene;gene=2SCD4.07;gene_biotype=protein_coding;gene_synonym=2SCD4.07;locus_tag=SCO4536
NC_003888.3	RefSeq	CDS	4954999	4955643	.	+	0	ID=cds4488;Parent=gene4583;Dbxref=Genbank:NP_628699.1,GeneID:1099976;Name=NP_628699.1;Note=2SCD4.07%2C hypothetical protein%2C len: 214 aa%3B similar to TR:CAB77303 (EMBL:AL160312) Streptomyces coelicolor hypothetical 21.2 kDa protein SCD35.19c%2C 193 aa%3B fasta scores: opt: 228 z-score: 264.4 E(): 2.9e-07%3B 31.1%25 identity in 212 aa overlap;gbkey=CDS;gene=2SCD4.07;product=hypothetical protein;protein_id=NP_628699.1;transl_table=11
NC_003888.3	RefSeq	gene	4955640	4956245	.	+	.	ID=gene4584;Dbxref=GeneID:1099977;Name=2SCD4.08;gbkey=Gene;gene=2SCD4.08;gene_biotype=protein_coding;gene_synonym=2SCD4.08;locus_tag=SCO4537
NC_003888.3	RefSeq	CDS	4955640	4956245	.	+	0	ID=cds4489;Parent=gene4584;Dbxref=Genbank:NP_628700.1,GeneID:1099977;Name=NP_628700.1;Note=2SCD4.08%2C unknown%2C len: 201 aa;gbkey=CDS;gene=2SCD4.08;product=hypothetical protein;protein_id=NP_628700.1;transl_table=11
NC_003888.3	RefSeq	gene	4956301	4956636	.	-	.	ID=gene4585;Dbxref=GeneID:1099978;Name=2SCD4.09c;gbkey=Gene;gene=2SCD4.09c;gene_biotype=protein_coding;gene_synonym=2SCD4.09c;locus_tag=SCO4538
NC_003888.3	RefSeq	CDS	4956301	4956636	.	-	0	ID=cds4490;Parent=gene4585;Dbxref=Genbank:NP_628701.1,GeneID:1099978;Name=NP_628701.1;Note=2SCD4.09c%2C unknown%2C len: 111 aa. High content in aspartic acid%2C leucine and lysine amino acid residues. Highly hydrophilic;gbkey=CDS;gene=2SCD4.09c;product=hypothetical protein;protein_id=NP_628701.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4956647	4956650	.	-	.	ID=id5688;gbkey=RBS
NC_003888.3	RefSeq	gene	4956659	4957264	.	-	.	ID=gene4586;Dbxref=GeneID:1099979;Name=2SCD4.10c;gbkey=Gene;gene=2SCD4.10c;gene_biotype=protein_coding;gene_synonym=2SCD4.10c;locus_tag=SCO4539
NC_003888.3	RefSeq	CDS	4956659	4957264	.	-	0	ID=cds4491;Parent=gene4586;Dbxref=Genbank:NP_628702.1,GeneID:1099979;Name=NP_628702.1;Note=2SCD4.10c%2C hypothetical protein%2C len: 201 aa%3B highly similar to TR:CAB82060 (EMBL:AL161803) Streptomyces coelicolor hypothetical 23.3 kDa protein SCD31.17%2C 215 aa%3B fasta scores: opt: 776 z-score: 926.5 E(): 0%3B 59.0%25 identity in 200 aa overlap;gbkey=CDS;gene=2SCD4.10c;product=hypothetical protein;protein_id=NP_628702.1;transl_table=11
NC_003888.3	RefSeq	gene	4957302	4957544	.	-	.	ID=gene4587;Dbxref=GeneID:1099980;Name=2SCD4.11c;gbkey=Gene;gene=2SCD4.11c;gene_biotype=protein_coding;gene_synonym=2SCD4.11c;locus_tag=SCO4540
NC_003888.3	RefSeq	CDS	4957302	4957544	.	-	0	ID=cds4492;Parent=gene4587;Dbxref=Genbank:NP_628703.1,GeneID:1099980;Name=NP_628703.1;Note=2SCD4.11c%2C unknown%2C len: 80 aa. Low G+C content (56.25%25);gbkey=CDS;gene=2SCD4.11c;product=hypothetical protein;protein_id=NP_628703.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4957549	4957552	.	-	.	ID=id5689;gbkey=RBS
NC_003888.3	RefSeq	gene	4957723	4959303	.	-	.	ID=gene4588;Dbxref=GeneID:1099981;Name=2SCD4.12c;gbkey=Gene;gene=2SCD4.12c;gene_biotype=protein_coding;gene_synonym=2SCD4.12c;locus_tag=SCO4541
NC_003888.3	RefSeq	CDS	4957723	4959303	.	-	0	ID=cds4493;Parent=gene4588;Dbxref=Genbank:NP_628704.1,GeneID:1099981;Name=NP_628704.1;Note=2SCD4.12c%2C possible membrane protein%2C len: 526 aa%3B N-terminal region identical to previously sequenced TR:Q9XD98 (EMBL:AF106004) Streptomyces coelicolor hypothetical 27.5 kDa protein%2C 249 aa and to TR:CAB82065 (EMBL:AL161803) Streptomyces coelicolor integral membrane protein SCD31.22%2C 604 aa%3B fasta scores: opt: 1299 z-score: 1315.4 E(): 0%3B 57.8%25 identity in 339 aa overlap. Contains possible coiled-coil region at approx. residues 108..198 and possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCD4.12c;product=hypothetical protein;protein_id=NP_628704.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4958527	4962371	.	+	.	ID=id5690;Note=previously sequenced DNA fragment. EMBL:AF106004 Streptomyces coelicolor whiJ sporulation regulatory locus.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	4959310	4959313	.	-	.	ID=id5691;gbkey=RBS
NC_003888.3	RefSeq	gene	4959382	4959573	.	-	.	ID=gene4589;Dbxref=GeneID:1099982;Name=2SCD4.13c;gbkey=Gene;gene=2SCD4.13c;gene_biotype=protein_coding;gene_synonym=2SCD4.13c;locus_tag=SCO4542
NC_003888.3	RefSeq	CDS	4959382	4959573	.	-	0	ID=cds4494;Parent=gene4589;Dbxref=Genbank:NP_628705.1,GeneID:1099982;Name=NP_628705.1;Note=2SCD4.13c%2C hypothetical protein%2C len: 63 aa%3B identical to previously sequenced TR:Q9XD97 (EMBL:AF106004) Streptomyces coelicolor BldB homolog hypothetical 6.8 kDa protein%2C 63 aa and to TR:Q9RDI7 (EMBL:AL136519) Streptomyces coelicolor hypothetical 7.1 kDa protein SCC57A.10c%2C 65 aa%3B fasta scores: opt: 237 z-score: 357.1 E(): 2e-12%3B 64.8%25 identity in 54 aa overlap;gbkey=CDS;gene=2SCD4.13c;product=hypothetical protein;protein_id=NP_628705.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4959581	4959585	.	-	.	ID=id5692;gbkey=RBS
NC_003888.3	RefSeq	gene	4959584	4960435	.	-	.	ID=gene4590;Dbxref=GeneID:1099983;Name=2SCD4.14c;gbkey=Gene;gene=2SCD4.14c;gene_biotype=protein_coding;gene_synonym=2SCD4.14c;locus_tag=SCO4543
NC_003888.3	RefSeq	CDS	4959584	4960435	.	-	0	ID=cds4495;Parent=gene4590;Dbxref=Genbank:NP_628706.1,GeneID:1099983;Name=NP_628706.1;Note=2SCD4.14c%2C hypothetical protein%2C len: 283 aa%3B identical to previously sequenced TR:Q9XD96 (EMBL:AF106004) Streptomyces coelicolor hypothetical 31.8 kDa protein%2C 283 aa;gbkey=CDS;gene=2SCD4.14c;product=hypothetical protein;protein_id=NP_628706.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4960442	4960446	.	-	.	ID=id5693;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	4960638	4960641	.	+	.	ID=id5694;gbkey=RBS
NC_003888.3	RefSeq	gene	4960649	4961074	.	+	.	ID=gene4591;Dbxref=GeneID:1099984;Name=2SCD4.15;gbkey=Gene;gene=2SCD4.15;gene_biotype=protein_coding;gene_synonym=2SCD4.15;locus_tag=SCO4544
NC_003888.3	RefSeq	CDS	4960649	4961074	.	+	0	ID=cds4496;Parent=gene4591;Dbxref=Genbank:NP_628707.1,GeneID:1099984;Name=NP_628707.1;Note=2SCD4.15%2C hypothetical protein%2C len: 141 aa%3B identical to previously sequenced TR:Q9XD95 (EMBL:AF106004) Streptomyces coelicolor hypothetical 15.4 kDa protein%2C 141 aa;gbkey=CDS;gene=2SCD4.15;product=hypothetical protein;protein_id=NP_628707.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4961099	4961102	.	+	.	ID=id5695;gbkey=RBS
NC_003888.3	RefSeq	gene	4961108	4962022	.	+	.	ID=gene4592;Dbxref=GeneID:1099985;Name=2SCD4.16;gbkey=Gene;gene=2SCD4.16;gene_biotype=protein_coding;gene_synonym=2SCD4.16;locus_tag=SCO4545
NC_003888.3	RefSeq	CDS	4961108	4962022	.	+	0	ID=cds4497;Parent=gene4592;Dbxref=Genbank:NP_628708.1,GeneID:1099985;Name=NP_628708.1;Note=2SCD4.16%2C hypothetical protein%2C len: 304 aa%3B identical to previously sequenced TR:Q9XD94 (EMBL:AF106004) Streptomyces coelicolor hypothetical 34.1 kDa protein%2C 304 aa and highly similar to TR:CAB81866 (EMBL:AL161691) Streptomyces coelicolor hypothetical protein SCD40A.21c%2C 302 aa%3B fasta scores: opt: 850 z-score: 894.4 E(): 0%3B 45.0%25 identity in 300 aa overlap;gbkey=CDS;gene=2SCD4.16;product=hypothetical protein;protein_id=NP_628708.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4962117	4962120	.	+	.	ID=id5696;gbkey=RBS
NC_003888.3	RefSeq	gene	4962128	4962778	.	+	.	ID=gene4593;Dbxref=GeneID:1099986;Name=2SCD4.17;gbkey=Gene;gene=2SCD4.17;gene_biotype=protein_coding;gene_synonym=2SCD4.17;locus_tag=SCO4546
NC_003888.3	RefSeq	CDS	4962128	4962778	.	+	0	ID=cds4498;Parent=gene4593;Dbxref=Genbank:NP_628709.1,GeneID:1099986;Name=NP_628709.1;Note=2SCD4.17%2C possible lipoprotein%2C len: 216 aa%3B similar to TR:CAB92614 (EMBL:AL356813) Streptomyces coelicolor lipoprotein SCK15.23%2C 221 aa%3B fasta scores: opt: 525 z-score: 595.2 E(): 1.1e-25%3B 39.4%25 identity in 213 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal signal peptide sequence;gbkey=CDS;gene=2SCD4.17;product=lipoprotein;protein_id=NP_628709.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4962164	4962196	.	+	.	ID=id5697;Dbxref=GeneID:1099986;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCD4.17
NC_003888.3	RefSeq	ribosome_entry_site	4962764	4962767	.	+	.	ID=id5698;Dbxref=GeneID:1099986;gbkey=RBS;gene=2SCD4.17
NC_003888.3	RefSeq	gene	4962778	4963845	.	+	.	ID=gene4594;Dbxref=GeneID:1099987;Name=2SCD4.18;gbkey=Gene;gene=2SCD4.18;gene_biotype=protein_coding;gene_synonym=2SCD4.18;locus_tag=SCO4547
NC_003888.3	RefSeq	CDS	4962778	4963845	.	+	0	ID=cds4499;Parent=gene4594;Dbxref=Genbank:NP_628710.1,GeneID:1099987;Name=NP_628710.1;Note=2SCD4.18%2C possible hypothetical protein%2C len: 355 aa%3B similar to TR:CAB77312 (EMBL:AL160312) Streptomyces coelicolor hypothetical protein SCD35.28c%2C 361 aa%3B fasta scores: opt: 942 z-score: 949.2 E(): 0%3B 43.9%25 identity in 360 aa overlap. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=2SCD4.18;product=hypothetical protein;protein_id=NP_628710.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	4964048	4964052	.	+	.	ID=id5699;gbkey=RBS
NC_003888.3	RefSeq	gene	4964061	4967069	.	+	.	ID=gene4595;Dbxref=GeneID:1099988;Name=2SCD4.19;gbkey=Gene;gene=2SCD4.19;gene_biotype=protein_coding;gene_synonym=2SCD4.19,SCD16A.35c;locus_tag=SCO4548
NC_003888.3	RefSeq	CDS	4964061	4967069	.	+	0	ID=cds4500;Parent=gene4595;Dbxref=Genbank:NP_733642.1,GeneID:1099988;Name=NP_733642.1;Note=SCD16A.35c%2C partial CDS%2C unknown%2C len: >726 aa~2SCD4.19%2C possible integral membrane protein (fragment)%2C len: >309 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCD4.19;product=hypothetical protein;protein_id=NP_733642.1;transl_table=11
NC_003888.3	RefSeq	gene	4967066	4967845	.	+	.	ID=gene4596;Dbxref=GeneID:1099989;Name=SCD16A.34c;gbkey=Gene;gene=SCD16A.34c;gene_biotype=protein_coding;gene_synonym=SCD16A.34c;locus_tag=SCO4549
NC_003888.3	RefSeq	CDS	4967066	4967845	.	+	0	ID=cds4501;Parent=gene4596;Dbxref=Genbank:NP_628711.1,GeneID:1099989;Name=NP_628711.1;Note=SCD16A.34c%2C possible type IV peptidase%2C len: 259aa%3B similar to many eg. SW:LEP3_PSEAE type IV prepilin peptidase from Pseudomonas aeruginosa (290 aa) fasta scores%3B opt: 304%2C z-score: 344.8%2C E(): 7e-12%2C (32.5%25 identity in 228 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD16A.34c;product=type IV peptidase;protein_id=NP_628711.1;transl_table=11
NC_003888.3	RefSeq	gene	4967924	4969123	.	+	.	ID=gene4597;Dbxref=GeneID:1099990;Name=SCD16A.33c;gbkey=Gene;gene=SCD16A.33c;gene_biotype=protein_coding;gene_synonym=SCD16A.33c;locus_tag=SCO4550
NC_003888.3	RefSeq	CDS	4967924	4969123	.	+	0	ID=cds4502;Parent=gene4597;Dbxref=Genbank:NP_628712.1,GeneID:1099990;Name=NP_628712.1;Note=SCD16A.33c%2C conserved hypothetical protein%2C len: 399 aa%3B similar to many e.g. TR:O25370 (EMBL:AE000579) conserved hypothetical protein from Helicobacter pylori (383 aa) fasta scores%3B opt: 1039%2C z-score: 1256.5%2C E(): 0%2C (44.5%25 identity in 357 aa overlap).;gbkey=CDS;gene=SCD16A.33c;product=hypothetical protein;protein_id=NP_628712.1;transl_table=11
NC_003888.3	RefSeq	gene	4969131	4969730	.	+	.	ID=gene4598;Dbxref=GeneID:1099991;Name=SCD16A.32c;gbkey=Gene;gene=SCD16A.32c;gene_biotype=protein_coding;gene_synonym=SCD16A.32c;locus_tag=SCO4551
NC_003888.3	RefSeq	CDS	4969131	4969730	.	+	0	ID=cds4503;Parent=gene4598;Dbxref=Genbank:NP_628713.1,GeneID:1099991;Name=NP_628713.1;Note=SCD16A.32c%2C unknown%2C len: 199 aa%3B similar to SW:YXP2_XANCP hypothetical protein from Xanthonomas campestris (257 aa) fasta scores%3B opt: 119%2C z-score: 138.0%2C E(): 2.3%2C (31.1%25 identity in 167 aa overlap).;gbkey=CDS;gene=SCD16A.32c;product=hypothetical protein;protein_id=NP_628713.1;transl_table=11
NC_003888.3	RefSeq	gene	4969766	4970770	.	-	.	ID=gene4599;Dbxref=GeneID:1099992;Name=SCD16A.31;gbkey=Gene;gene=SCD16A.31;gene_biotype=protein_coding;gene_synonym=SCD16A.31;locus_tag=SCO4552
NC_003888.3	RefSeq	CDS	4969766	4970770	.	-	0	ID=cds4504;Parent=gene4599;Dbxref=Genbank:NP_628714.1,GeneID:1099992;Name=NP_628714.1;Note=SCD16A.31%2C possible  hydrolase%2C len: 334aa%3B similar to eg. TR:Q59145 (EMBL:D31818) chitinases II precursor from Aeromonas sp. NO.10S-24 (542 aa) fasta scores%3B opt: 482%2C z-score: 492.4%2C E(): 4.2e-20%2C (36.6%25 identity in 273 aa overlap). Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SCD16A.31;product=hydrolase;protein_id=NP_628714.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4970705	4970737	.	-	.	ID=id5700;Dbxref=GeneID:1099992;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SCD16A.31
NC_003888.3	RefSeq	gene	4970964	4971383	.	+	.	ID=gene4600;Dbxref=GeneID:1099993;Name=SCD16A.30c;gbkey=Gene;gene=SCD16A.30c;gene_biotype=protein_coding;gene_synonym=SCD16A.30c;locus_tag=SCO4553
NC_003888.3	RefSeq	CDS	4970964	4971383	.	+	0	ID=cds4505;Parent=gene4600;Dbxref=Genbank:NP_628715.1,GeneID:1099993;Name=NP_628715.1;Note=SCD16A.30c%2C membrane protein%2C len: 139 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD16A.30c;product=hypothetical protein;protein_id=NP_628715.1;transl_table=11
NC_003888.3	RefSeq	gene	4971401	4973632	.	+	.	ID=gene4601;Dbxref=GeneID:1099994;Name=SCD16A.29c;gbkey=Gene;gene=SCD16A.29c;gene_biotype=protein_coding;gene_synonym=SCD16A.29c;locus_tag=SCO4554
NC_003888.3	RefSeq	CDS	4971401	4973632	.	+	0	ID=cds4506;Parent=gene4601;Dbxref=Genbank:NP_628716.1,GeneID:1099994;Name=NP_628716.1;Note=SCD16A.29c%2C possible bi-functional transferase/deacetylase%2C len: 743aa%3B 380-620aa region similar to TR:BAA35803 (EMBL:D90739) glycosyl transferase from Escherichia coli (441 aa) fasta scores%3B opt: 518%2C z-score: 576.7%2C E(): 8.6e-25%2C (35.4%25 identity in 257 aa overlap). 100-290aa region similar to SW:NODB_RHIME chitooligosaccharide deactylase from Rhizobium meliloti (217 aa) fasta scores%3B opt: 398%2C z-score: 448.0%2C E(): 1.3e-17%2C (35.7%25 identity in 196 aa overlap). Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases. Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCD16A.29c;product=bifunctional transferase/deacetylase;protein_id=NP_628716.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4972568	4973044	.	+	.	ID=id5701;Dbxref=GeneID:1099994;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 80.70%2C E-value 3e-20.;gbkey=misc_feature;gene=SCD16A.29c
NC_003888.3	RefSeq	gene	4973632	4974723	.	+	.	ID=gene4602;Dbxref=GeneID:1099995;Name=SCD16A.28c;gbkey=Gene;gene=SCD16A.28c;gene_biotype=protein_coding;gene_synonym=SCD16A.28c;locus_tag=SCO4555
NC_003888.3	RefSeq	CDS	4973632	4974723	.	+	0	ID=cds4507;Parent=gene4602;Dbxref=Genbank:NP_628717.1,GeneID:1099995;Name=NP_628717.1;Note=SCD16A.28c%2C possible integral membrane transferase%2C len: 363aa%3B similar to TR:Q56803 (EMBL:X78451) O-acetyl transferase from Xanthomonas campestris (364 aa) fasta scores%3B opt: 123%2C z-score: 149.6%2C E(): 0.53%2C (26.2%25 identity in 378 aa overlap). Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SCD16A.28c;product=integral membrane transferase;protein_id=NP_628717.1;transl_table=11
NC_003888.3	RefSeq	gene	4974767	4975462	.	+	.	ID=gene4603;Dbxref=GeneID:1099996;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;gene_synonym=SCD16A.27c;locus_tag=SCO4556
NC_003888.3	RefSeq	CDS	4974767	4975462	.	+	0	ID=cds4508;Parent=gene4603;Dbxref=Genbank:NP_628718.1,GeneID:1099996;Name=NP_628718.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis methyltransferase;protein_id=NP_628718.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4974773	4975453	.	+	.	ID=id5702;Dbxref=GeneID:1099996;Note=Pfam match to entry PF01209 Ubie_methyltran%2C ubiE/COQ5 methyltransferase family%2C score 185.60%2C E-value 8.2e-52.;gbkey=misc_feature;gene=ubiE
NC_003888.3	RefSeq	gene	4975449	4975796	.	-	.	ID=gene4604;Dbxref=GeneID:1099997;Name=SCD16A.26;gbkey=Gene;gene=SCD16A.26;gene_biotype=protein_coding;gene_synonym=SCD16A.26;locus_tag=SCO4557
NC_003888.3	RefSeq	CDS	4975449	4975796	.	-	0	ID=cds4509;Parent=gene4604;Dbxref=Genbank:NP_628719.1,GeneID:1099997;Name=NP_628719.1;Note=SCD16A.26%2C unknown%2C len: 115aa;gbkey=CDS;gene=SCD16A.26;product=hypothetical protein;protein_id=NP_628719.1;transl_table=11
NC_003888.3	RefSeq	gene	4975855	4976418	.	-	.	ID=gene4605;Dbxref=GeneID:1099998;Name=SCD16A.25;gbkey=Gene;gene=SCD16A.25;gene_biotype=protein_coding;gene_synonym=SCD16A.25;locus_tag=SCO4558
NC_003888.3	RefSeq	CDS	4975855	4976418	.	-	0	ID=cds4510;Parent=gene4605;Dbxref=Genbank:NP_628720.1,GeneID:1099998;Name=NP_628720.1;Note=SCD16A.25%2C possible acetyltransferase%2C len: 187 aa%3B similar to SW:YKKB_BACSU hypothetical protein from Bacillus subtilis (172 aa) fasta scores%3B opt: 237%2C z-score: 294.8%2C E(): 4.3e-09%2C (30.8%25 identity in 146 aa overlap). Also similar to the N-terminal half of TR:Q53796 (EMBL:L26955) bleomycin acetyltransferase from the bleomycin-resistance region of Streptomyces verticillus (301 aa) fasta scores%3B opt: 163%2C z-score: 203.0%2C E(): 0.00056%2C (33.5%25 identity in 155 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SCD16A.25;product=acetyltransferase;protein_id=NP_628720.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4975978	4976391	.	-	.	ID=id5703;Dbxref=GeneID:1099998;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 33.20%2C E-value 6.2e-06.;gbkey=misc_feature;gene=SCD16A.25
NC_003888.3	RefSeq	gene	4976516	4977808	.	+	.	ID=gene4606;Dbxref=GeneID:1099999;Name=SCD16A.24c;gbkey=Gene;gene=SCD16A.24c;gene_biotype=protein_coding;gene_synonym=SCD16A.24c;locus_tag=SCO4559
NC_003888.3	RefSeq	CDS	4976516	4977808	.	+	0	ID=cds4511;Parent=gene4606;Dbxref=Genbank:NP_628721.1,GeneID:1099999;Name=NP_628721.1;Note=SCD16A.24c%2C possible electron transfer oxidoreductase%2C len: 430a a%3B similar to many e.g. TR:O06427 (EMBL:Z95558) hypothetical protein from Mycobacterium tuberculosis (408 aa) fasta scores%3B opt: 449%2C z-score: 501.6%2C E(): 1.3e-20%2C (34.6%25 identity in 416 aa overlap) and SW:FIXC_ECOLI probable electron transfer oxidoreductase FixC from Escherichia coli (428 aa) fasta scores%3B opt: 277%2C z-score: 311.0%2C E(): 5.4e-10%2C (27.0%25 identity in 367 aa overlap).;gbkey=CDS;gene=SCD16A.24c;product=electron transfer oxidoreductase;protein_id=NP_628721.1;transl_table=11
NC_003888.3	RefSeq	gene	4977869	4978495	.	-	.	ID=gene4607;Dbxref=GeneID:1100000;Name=SCD16A.23;gbkey=Gene;gene=SCD16A.23;gene_biotype=protein_coding;gene_synonym=SCD16A.23;locus_tag=SCO4560
NC_003888.3	RefSeq	CDS	4977869	4978495	.	-	0	ID=cds4512;Parent=gene4607;Dbxref=Genbank:NP_628722.1,GeneID:1100000;Name=NP_628722.1;Note=SCD16A.23%2C possible polypetide deformylase%2C len: 208aa%3B similar to many eg. TR:P96275 (EMBL:Z84724) hypothetical protein from Mycobacterium tuberculosis (197 aa) fasta scores%3B opt: 425%2C z-score: 513.1%2C E(): 3e-21%2C (48.0%25 identity in 171 aa overlap) and SW:DEF_ECOLI polypetide deformylase from Escherichia coli (168 aa) fasta scores%3B opt: 373%2C z-score: 452.6%2C E(): 7e-18%2C (35.6%25 identity in 174 aa overlap). Contains Pfam match to entry PF01327 Pep_deformylase%2C Polypeptide deformylase.;gbkey=CDS;gene=SCD16A.23;product=polypetide deformylase;protein_id=NP_628722.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4977980	4978414	.	-	.	ID=id5704;Dbxref=GeneID:1100000;Note=Pfam match to entry PF01327 Pep_deformylase%2C Polypeptide deformylase%2C score 179.80%2C E-value 4.6e-50.;gbkey=misc_feature;gene=SCD16A.23
NC_003888.3	RefSeq	gene	4978629	4979462	.	-	.	ID=gene4608;Dbxref=GeneID:1100001;Name=SCD16A.22;gbkey=Gene;gene=SCD16A.22;gene_biotype=protein_coding;gene_synonym=SCD16A.22;locus_tag=SCO4561
NC_003888.3	RefSeq	CDS	4978629	4979462	.	-	0	ID=cds4513;Parent=gene4608;Dbxref=Genbank:NP_628723.1,GeneID:1100001;Name=NP_628723.1;Note=SCD16A.22%2C possible hypothetical protein%2C len: 277aa%3B similar to many eg. TR:CAB39862 (EMBL:AL049497) hypothetical protein from Streptomyces coelicolor (338 aa) fasta scores%3B opt: 386%2C z-score: 364.3%2C E(): 5.8e-13%2C (35.1%25 identity in 251 aa overlap) and the C-terminal half of many Listeria spp. extracellular proteins eg. SW:P60_LISIN P60 Listeria innocua (481 aa) fasta scores%3B opt: %2C z-score: 328.5%2C E(): 5.7e-11%2C (28.9%25 identity in 242 aa overlap). Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family. Also contains coiled-coil region at 92-125aa and possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD16A.22;product=hypothetical protein;protein_id=NP_628723.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4978635	4978955	.	-	.	ID=id5705;Dbxref=GeneID:1100001;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 107.80%2C E-value 2e-28.;gbkey=misc_feature;gene=SCD16A.22
NC_003888.3	RefSeq	gene	4980274	4980633	.	+	.	ID=gene4609;Dbxref=GeneID:1100002;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;gene_synonym=nuoA,SCD16A.21c;locus_tag=SCO4562
NC_003888.3	RefSeq	CDS	4980274	4980633	.	+	0	ID=cds4514;Parent=gene4609;Dbxref=Genbank:NP_628724.1,GeneID:1100002;Name=NP_628724.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoA;product=NADH dehydrogenase subunit A;protein_id=NP_628724.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4980379	4980627	.	+	.	ID=id5706;Dbxref=GeneID:1100002;Note=Pfam match to entry PF00507 oxidored_q4%2C NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3%2C score 86.90%2C E-value 2.2e-25.;gbkey=misc_feature;gene=nuoA
NC_003888.3	RefSeq	gene	4980646	4981200	.	+	.	ID=gene4610;Dbxref=GeneID:1100003;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;gene_synonym=nuoB,SCD16A.20c;locus_tag=SCO4563
NC_003888.3	RefSeq	CDS	4980646	4981200	.	+	0	ID=cds4515;Parent=gene4610;Dbxref=Genbank:NP_628725.1,GeneID:1100003;Name=NP_628725.1;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;gbkey=CDS;gene=nuoB;product=NADH dehydrogenase subunit B;protein_id=NP_628725.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4980763	4981104	.	+	.	ID=id5707;Dbxref=GeneID:1100003;Note=Pfam match to entry PF01058 oxidored_q6%2C NADH ubiquinone oxidoreductase%2C 20 Kd subunit%2C score 270.90%2C E-value 1.7e-77.;gbkey=misc_feature;gene=nuoB
NC_003888.3	RefSeq	gene	4981197	4981952	.	+	.	ID=gene4611;Dbxref=GeneID:1100004;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;gene_synonym=nuoC,SCD16A.19c;locus_tag=SCO4564
NC_003888.3	RefSeq	CDS	4981197	4981952	.	+	0	ID=cds4516;Parent=gene4611;Dbxref=Genbank:NP_628726.1,GeneID:1100004;Name=NP_628726.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoC;product=NADH dehydrogenase subunit C;protein_id=NP_628726.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4981695	4981889	.	+	.	ID=id5708;Dbxref=GeneID:1100004;Note=Pfam match to entry PF00329 complex1_30Kd%2C Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit%2C score 101.50%2C E-value 1.7e-26.;gbkey=misc_feature;gene=nuoC
NC_003888.3	RefSeq	gene	4981949	4983271	.	+	.	ID=gene4612;Dbxref=GeneID:1100005;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;gene_synonym=nuoD,SCD16A.18c;locus_tag=SCO4565
NC_003888.3	RefSeq	CDS	4981949	4983271	.	+	0	ID=cds4517;Parent=gene4612;Dbxref=Genbank:NP_628727.1,GeneID:1100005;Name=NP_628727.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoD;product=NADH dehydrogenase subunit D;protein_id=NP_628727.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4982408	4983268	.	+	.	ID=id5709;Dbxref=GeneID:1100005;Note=Pfam match to entry PF00346 complex1_49Kd%2C Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit%2C score 379.10%2C E-value 4.5e-136.;gbkey=misc_feature;gene=nuoD
NC_003888.3	RefSeq	gene	4983268	4984140	.	+	.	ID=gene4613;Dbxref=GeneID:1100006;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;gene_synonym=nuoE,SCD16A.17c;locus_tag=SCO4566
NC_003888.3	RefSeq	CDS	4983268	4984140	.	+	0	ID=cds4518;Parent=gene4613;Dbxref=Genbank:NP_628728.1,GeneID:1100006;Name=NP_628728.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoE;product=NADH dehydrogenase subunit E;protein_id=NP_628728.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4983340	4983801	.	+	.	ID=id5710;Dbxref=GeneID:1100006;Note=Pfam match to entry PF01257 complex1_24kD%2C Respiratory-chain NADH dehydrogenase 24 Kd subunit%2C score 163.00%2C E-value 5.2e-45.;gbkey=misc_feature;gene=nuoE
NC_003888.3	RefSeq	gene	4984137	4985486	.	+	.	ID=gene4614;Dbxref=GeneID:1100007;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;gene_synonym=nuoF,SCD16A.16c;locus_tag=SCO4567
NC_003888.3	RefSeq	CDS	4984137	4985486	.	+	0	ID=cds4519;Parent=gene4614;Dbxref=Genbank:NP_628729.1,GeneID:1100007;Name=NP_628729.1;Note=SCD16A.16c%2C nuoF%2C NADH dehydrogenase subunit%2C len: 449 aa%3B similar to many e.g. TR:P95176 (EMBL:Z83867) NuoF%2C NADH dehydrogenase subunit from Mycobacterium tuberculosis (445 aa) fasta scores%3B opt: 2314%2C z-score: 2659.4%2C E(): 0%2C (76.3%25 identity in 434 aa overlap) and SW:NUOF_ECOLI%2C NADH dehydrogenase subunit NuoF from Escherichia coli (445 aa) fasta scores%3B opt: 1346%2C z-score: 1547.8%2C E(): 0%2C (48.1%25 identity in 405 aa overlap). Contains Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2.;gbkey=CDS;gene=nuoF;product=NADH dehydrogenase subunit NuoF;protein_id=NP_628729.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4985193	4985228	.	+	.	ID=id5711;Dbxref=GeneID:1100007;Note=PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2.;gbkey=misc_feature;gene=nuoF
NC_003888.3	RefSeq	sequence_feature	4985310	4985333	.	+	.	ID=id5712;Dbxref=GeneID:1100007;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=nuoF
NC_003888.3	RefSeq	gene	4985483	4988014	.	+	.	ID=gene4615;Dbxref=GeneID:1100008;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;gene_synonym=nuoG,SCD16A.15c;locus_tag=SCO4568
NC_003888.3	RefSeq	CDS	4985483	4988014	.	+	0	ID=cds4520;Parent=gene4615;Dbxref=Genbank:NP_628730.1,GeneID:1100008;Name=NP_628730.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoG;product=NADH dehydrogenase subunit G;protein_id=NP_628730.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4985543	4985761	.	+	.	ID=id5713;Dbxref=GeneID:1100008;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 6.70%2C E-value 0.0053.;gbkey=misc_feature;gene=nuoG
NC_003888.3	RefSeq	sequence_feature	4985840	4985878	.	+	.	ID=id5714;Dbxref=GeneID:1100008;Note=PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2.;gbkey=misc_feature;gene=nuoG
NC_003888.3	RefSeq	sequence_feature	4987334	4987477	.	+	.	ID=id5715;Dbxref=GeneID:1100008;Note=Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 26.60%2C E-value 2.9e-07.;gbkey=misc_feature;gene=nuoG
NC_003888.3	RefSeq	gene	4988011	4989414	.	+	.	ID=gene4616;Dbxref=GeneID:1100009;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;gene_synonym=nuoH,SCD16A.14c;locus_tag=SCO4569
NC_003888.3	RefSeq	CDS	4988011	4989414	.	+	0	ID=cds4521;Parent=gene4616;Dbxref=Genbank:NP_628731.1,GeneID:1100009;Name=NP_628731.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoH;product=NADH dehydrogenase subunit H;protein_id=NP_628731.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4988062	4989069	.	+	.	ID=id5716;Dbxref=GeneID:1100009;Note=Pfam match to entry PF00146 NADHdh%2C NADH dehydrogenases%2C score 395.50%2C E-value 5e-115.;gbkey=misc_feature;gene=nuoH
NC_003888.3	RefSeq	sequence_feature	4988197	4988244	.	+	.	ID=id5717;Dbxref=GeneID:1100009;Note=PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1.;gbkey=misc_feature;gene=nuoH
NC_003888.3	RefSeq	gene	4989449	4990084	.	+	.	ID=gene4617;Dbxref=GeneID:1100010;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;gene_synonym=nuoI,SCD16A.13c;locus_tag=SCO4570
NC_003888.3	RefSeq	CDS	4989449	4990084	.	+	0	ID=cds4522;Parent=gene4617;Dbxref=Genbank:NP_628732.1,GeneID:1100010;Name=NP_628732.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoI;product=NADH dehydrogenase subunit I;protein_id=NP_628732.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4989605	4989817	.	+	.	ID=id5718;Dbxref=GeneID:1100010;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 47.00%2C E-value 1.8e-12.;gbkey=misc_feature;gene=nuoI
NC_003888.3	RefSeq	sequence_feature	4989626	4989661	.	+	.	ID=id5719;Dbxref=GeneID:1100010;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=nuoI
NC_003888.3	RefSeq	sequence_feature	4989761	4989796	.	+	.	ID=id5720;Dbxref=GeneID:1100010;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=nuoI
NC_003888.3	RefSeq	gene	4990081	4990938	.	+	.	ID=gene4618;Dbxref=GeneID:1100011;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;gene_synonym=nuoJ,SCD16A.12c;locus_tag=SCO4571
NC_003888.3	RefSeq	CDS	4990081	4990938	.	+	0	ID=cds4523;Parent=gene4618;Dbxref=Genbank:NP_628733.1,GeneID:1100011;Name=NP_628733.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoJ;product=NADH dehydrogenase subunit J;protein_id=NP_628733.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4990135	4990620	.	+	.	ID=id5721;Dbxref=GeneID:1100011;Note=Pfam match to entry PF00499 oxidored_q3%2C NADH-ubiquinone/plastoquinone oxidoreductase chain 6%2C score 25.60%2C E-value 2.8e-07.;gbkey=misc_feature;gene=nuoJ
NC_003888.3	RefSeq	gene	4990935	4991234	.	+	.	ID=gene4619;Dbxref=GeneID:1100012;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;gene_synonym=nuoK,SCD16A.11c;locus_tag=SCO4572
NC_003888.3	RefSeq	CDS	4990935	4991234	.	+	0	ID=cds4524;Parent=gene4619;Dbxref=Genbank:NP_628734.1,GeneID:1100012;Name=NP_628734.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoK;product=NADH dehydrogenase subunit K;protein_id=NP_628734.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4990944	4991231	.	+	.	ID=id5722;Dbxref=GeneID:1100012;Note=Pfam match to entry PF00420 oxidored_q2%2C NADH-ubiquinone/plastoquinone oxidoreductase chain 4L%2C score 66.90%2C E-value 3e-17.;gbkey=misc_feature;gene=nuoK
NC_003888.3	RefSeq	gene	4991249	4993213	.	+	.	ID=gene4620;Dbxref=GeneID:1100013;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;gene_synonym=nuoL,SCD16A.10c;locus_tag=SCO4573
NC_003888.3	RefSeq	CDS	4991249	4993213	.	+	0	ID=cds4525;Parent=gene4620;Dbxref=Genbank:NP_628735.1,GeneID:1100013;Name=NP_628735.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;gene=nuoL;product=NADH dehydrogenase subunit L;protein_id=NP_628735.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4991435	4991620	.	+	.	ID=id5723;Dbxref=GeneID:1100013;Note=Pfam match to entry PF00662 oxidored_q1_N%2C NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus%2C score 90.20%2C E-value 4.1e-23.;gbkey=misc_feature;gene=nuoL
NC_003888.3	RefSeq	sequence_feature	4991651	4992553	.	+	.	ID=id5724;Dbxref=GeneID:1100013;Note=Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 321.50%2C E-value 9.7e-93.;gbkey=misc_feature;gene=nuoL
NC_003888.3	RefSeq	gene	4993219	4994790	.	+	.	ID=gene4621;Dbxref=GeneID:1100014;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;gene_synonym=nuoM,SCD16A.09c;locus_tag=SCO4574
NC_003888.3	RefSeq	CDS	4993219	4994790	.	+	0	ID=cds4526;Parent=gene4621;Dbxref=Genbank:NP_628736.1,GeneID:1100014;Name=NP_628736.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoM;product=NADH dehydrogenase subunit M;protein_id=NP_628736.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4993633	4994553	.	+	.	ID=id5725;Dbxref=GeneID:1100014;Note=Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 243.10%2C E-value 3.8e-69.;gbkey=misc_feature;gene=nuoM
NC_003888.3	RefSeq	gene	4994787	4996445	.	+	.	ID=gene4622;Dbxref=GeneID:1100015;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;gene_synonym=nuoN,SCD16A.08c;locus_tag=SCO4575
NC_003888.3	RefSeq	CDS	4994787	4996445	.	+	0	ID=cds4527;Parent=gene4622;Dbxref=Genbank:NP_628737.1,GeneID:1100015;Name=NP_628737.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoN;product=NADH dehydrogenase subunit N;protein_id=NP_628737.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4995330	4996256	.	+	.	ID=id5726;Dbxref=GeneID:1100015;Note=Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 247.10%2C E-value 2.5e-70.;gbkey=misc_feature;gene=nuoN
NC_003888.3	RefSeq	gene	4996565	4997164	.	-	.	ID=gene4623;Dbxref=GeneID:1100016;Name=SCD16A.07;gbkey=Gene;gene=SCD16A.07;gene_biotype=protein_coding;gene_synonym=SCD16A.07;locus_tag=SCO4576
NC_003888.3	RefSeq	CDS	4996565	4997164	.	-	0	ID=cds4528;Parent=gene4623;Dbxref=Genbank:NP_628738.1,GeneID:1100016;Name=NP_628738.1;Note=SCD16A.07%2C unknown%2C len: 199 aa%3B weakly similar to others eg. TR:Q55360 (EMBL:D64003) hypothetical protein from Synechocystis sp. strain PCC6803 (190 aa) fasta scores%3B opt: 168%2C z-score: 209.8%2C E(): 0.00023%2C (26.6%25 identity in 177 aa overlap).;gbkey=CDS;gene=SCD16A.07;product=hypothetical protein;protein_id=NP_628738.1;transl_table=11
NC_003888.3	RefSeq	gene	4997397	4999427	.	+	.	ID=gene4624;Dbxref=GeneID:1100017;Name=SCD16A.06c;gbkey=Gene;gene=SCD16A.06c;gene_biotype=protein_coding;gene_synonym=SCD16A.06c;locus_tag=SCO4577
NC_003888.3	RefSeq	CDS	4997397	4999427	.	+	0	ID=cds4529;Parent=gene4624;Dbxref=Genbank:NP_628739.1,GeneID:1100017;Name=NP_628739.1;Note=SCD16A.06c%2C probable helicase%2C len: 676aa%3B similar to many (both prokaryote and eukaryote) egs. TR:AAD05424 (EMBL:AF047374) RecQ helicase from Neisseria gonorrhoeae (767 aa) fasta scores%3B opt: 1809%2C z-score: 1769.1%2C E(): 0%2C (50.4%25 identity in 601 aa overlap) and SW:HUS2_SCHPO ATP-dependent helicase from Schizosaccharomyces pombe (1328 aa) fasta scores%3B opt: 1013%2C z-score: 988.7%2C E(): 0%2C (40.2%25 identity in 493 aa overlap). Contains Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 78.40%2C E-value 1.4e-19.;gbkey=CDS;gene=SCD16A.06c;product=helicase;protein_id=NP_628739.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	4998177	4998422	.	+	.	ID=id5727;Dbxref=GeneID:1100017;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 78.40%2C E-value 1.4e-19.;gbkey=misc_feature;gene=SCD16A.06c
NC_003888.3	RefSeq	gene	4999466	4999690	.	-	.	ID=gene4625;Dbxref=GeneID:1100018;Name=SCD16A.05;gbkey=Gene;gene=SCD16A.05;gene_biotype=protein_coding;gene_synonym=SCD16A.05;locus_tag=SCO4578
NC_003888.3	RefSeq	CDS	4999466	4999690	.	-	0	ID=cds4530;Parent=gene4625;Dbxref=Genbank:NP_628740.1,GeneID:1100018;Name=NP_628740.1;Note=SCD16A.05%2C unknown%2C len: 74aa%3B predicted based upon amino acid and codon usage.;gbkey=CDS;gene=SCD16A.05;product=hypothetical protein;protein_id=NP_628740.1;transl_table=11
NC_003888.3	RefSeq	gene	4999752	5000690	.	-	.	ID=gene4626;Dbxref=GeneID:1100019;Name=SCD16A.04;gbkey=Gene;gene=SCD16A.04;gene_biotype=protein_coding;gene_synonym=SCD16A.04;locus_tag=SCO4579
NC_003888.3	RefSeq	CDS	4999752	5000690	.	-	0	ID=cds4531;Parent=gene4626;Dbxref=Genbank:NP_628741.1,GeneID:1100019;Name=NP_628741.1;Note=SCD16A.04%2C possible integral membrane protein%2C len: 312aa%3B similar to others e.g. TR:O32910 (EMBL:AL008609) hypothetical protein from Mycobacterium leprae (316 aa) fasta scores%3B opt: 405%2C z-score: 470.7%2C E(): 6.9e-19%2C (32.7%25 identity in 324 aa overlap) and TR:O86628 (EMBL:AL031155) integral membrane protein from Streptomyces coelicolor (309 aa) fasta scores%3B opt: 222%2C z-score: 261.4%2C E(): 3.1e-07%2C (31.0%25 identity in 310 aa overlap). Contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SCD16A.04;product=hypothetical protein;protein_id=NP_628741.1;transl_table=11
NC_003888.3	RefSeq	gene	5000997	5002253	.	-	.	ID=gene4627;Dbxref=GeneID:1100020;Name=SCD16A.03;gbkey=Gene;gene=SCD16A.03;gene_biotype=protein_coding;gene_synonym=SCD16A.03;locus_tag=SCO4580
NC_003888.3	RefSeq	CDS	5000997	5002253	.	-	0	ID=cds4532;Parent=gene4627;Dbxref=Genbank:NP_628742.1,GeneID:1100020;Name=NP_628742.1;Note=SCD16A.03%2C probable fumarylacetoacetase%2C len: 418aa%3B similar to several from eukaryotes eg. SW:FAAA_HUMAN fumarylacetoacetase from human (419 aa) fasta scores%3B opt: 1192%2C z-score: 1370.0%2C E(): 0%2C (44.6%25 identity in 426 aa overlap).;gbkey=CDS;gene=SCD16A.03;product=fumarylacetoacetase;protein_id=NP_628742.1;transl_table=11
NC_003888.3	RefSeq	gene	5002738	5003547	.	+	.	ID=gene4628;Dbxref=GeneID:1100021;Name=SCD16A.02c;gbkey=Gene;gene=SCD16A.02c;gene_biotype=protein_coding;gene_synonym=SCD16A.02c;locus_tag=SCO4581
NC_003888.3	RefSeq	CDS	5002738	5003547	.	+	0	ID=cds4533;Parent=gene4628;Dbxref=Genbank:NP_628743.1,GeneID:1100021;Name=NP_628743.1;Note=SCD16A.02c%2C conserved hypothetical protein%2C len: 269aa%3B similar to many hypothetical proteins egs. TR:CAA22232 (EMBL:AL034355) (280 aa) fasta scores%3B opt: 1028%2C z-score: 1143.6%2C E(): 0%2C (61.5%25 identity in 260 aa overlap) and TR:CAA22222 (EMBL:AL034355) (305 aa) fasta scores%3B opt: 546%2C z-score: 611.4%2C E(): 1e-26%2C (40.2%25 identity in 271 aa overlap) hypothetical proteins from Streptomyces coelicolor. Also similar to SW:YIDA_ECOLI hypothetical protein from Escherichia coli (270 aa) fasta scores%3B opt: 314%2C z-score: 356.2%2C E(): 1.6e-12%2C (31.0%25 identity in 268 aa overlap). Contains Pfam match to entry PF00592 DUF3%2C Domain of Unknown Function 3%2C score 116.90%2C E-value 3.9e-31;gbkey=CDS;gene=SCD16A.02c;product=hypothetical protein;protein_id=NP_628743.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5002759	5003502	.	+	.	ID=id5728;Dbxref=GeneID:1100021;Note=Pfam match to entry PF00592 DUF3%2C Domain of Unknown Function 3%2C score 116.90%2C E-value 3.9e-31.;gbkey=misc_feature;gene=SCD16A.02c
NC_003888.3	RefSeq	gene	5003571	5004062	.	-	.	ID=gene4629;Dbxref=GeneID:1100022;Name=SCD16A.01;gbkey=Gene;gene=SCD16A.01;gene_biotype=protein_coding;gene_synonym=SCD16A.01;locus_tag=SCO4582
NC_003888.3	RefSeq	CDS	5003571	5004062	.	-	0	ID=cds4534;Parent=gene4629;Dbxref=Genbank:NP_628744.1,GeneID:1100022;Name=NP_628744.1;Note=SCD16A.01%2C unknown%2C len: 163 aa%3B some similarity to proteins associated with bacteriophages eg. TR:Q38352 (EMBL:L29568) ORF360 hypothetical protein from Lactobacillus delbrueckii subsp. lactis bacteriophage LL-H (360 aa) fasta scores%3B opt: 255%2C z-score: 294.2%2C E(): 4.7e-09%2C (45.5%25 identity in 101 aa overlap). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD16A.01;product=hypothetical protein;protein_id=NP_628744.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5004904	5004909	.	+	.	ID=id5729;gbkey=RBS
NC_003888.3	RefSeq	gene	5004917	5005927	.	+	.	ID=gene4630;Dbxref=GeneID:1100023;Name=SCD20.01;gbkey=Gene;gene=SCD20.01;gene_biotype=protein_coding;gene_synonym=SCD20.01;locus_tag=SCO4583
NC_003888.3	RefSeq	CDS	5004917	5005927	.	+	0	ID=cds4535;Parent=gene4630;Dbxref=Genbank:NP_628745.1,GeneID:1100023;Name=NP_628745.1;Note=SCD20.01%2C polyprenyl diphosphate synthase%2C len: 336 aa%3B similar to SW:HEP2_BACSU (EMBL:M80245) Bacillus subtilis heptaprenyl diphosphate synthase component II (EC 2.5.1.30) HepT%2C 348 aa%3B fasta scores: opt: 586 z-score: 674.6 E(): 4.2e-30%3B 33.0%25 identity in 309 aa overlap. Contains Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetases and match to Prosite entry PS00444 Polyprenyl synthetases signature 2;gbkey=CDS;gene=SCD20.01;product=polyprenyl diphosphate synthase;protein_id=NP_628745.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5005037	5005795	.	+	.	ID=id5730;Dbxref=GeneID:1100023;Note=Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetases%2C score 187.90%2C E-value 1.6e-52;gbkey=misc_feature;gene=SCD20.01
NC_003888.3	RefSeq	sequence_feature	5005550	5005588	.	+	.	ID=id5731;Dbxref=GeneID:1100023;Note=PS00444 Polyprenyl synthetases signature 2;gbkey=misc_feature;gene=SCD20.01
NC_003888.3	RefSeq	ribosome_entry_site	5006172	5006177	.	+	.	ID=id5732;gbkey=RBS
NC_003888.3	RefSeq	gene	5006187	5007449	.	+	.	ID=gene4631;Dbxref=GeneID:1100024;Name=SCD20.02;gbkey=Gene;gene=SCD20.02;gene_biotype=protein_coding;gene_synonym=SCD20.02;locus_tag=SCO4584
NC_003888.3	RefSeq	CDS	5006187	5007449	.	+	0	ID=cds4536;Parent=gene4631;Dbxref=Genbank:NP_628746.1,GeneID:1100024;Name=NP_628746.1;Note=SCD20.02%2C possible membrane protein%2C len: 420 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD20.02;product=hypothetical protein;protein_id=NP_628746.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5007492	5007495	.	+	.	ID=id5733;gbkey=RBS
NC_003888.3	RefSeq	gene	5007502	5008485	.	+	.	ID=gene4632;Dbxref=GeneID:1100025;Name=SCD20.03;gbkey=Gene;gene=SCD20.03;gene_biotype=protein_coding;gene_synonym=SCD20.03;locus_tag=SCO4585
NC_003888.3	RefSeq	CDS	5007502	5008485	.	+	0	ID=cds4537;Parent=gene4632;Dbxref=Genbank:NP_628747.1,GeneID:1100025;Name=NP_628747.1;Note=SCD20.03%2C probable ABC transporter ATP-binding protein%2C len: 327 aa%3B similar to SW:BCRA_BACLI (EMBL:L20573) Bacillus licheniformis bacitracin transport ATP-binding protein BcrA%2C 306 aa%3B fasta scores: opt: 636 z-score: 662.0 E(): 2.1e-29%3B 39.6%25 identity in 308 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCD20.03;product=ABC transporter ATP-binding protein;protein_id=NP_628747.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5007643	5008191	.	+	.	ID=id5734;Dbxref=GeneID:1100025;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 183.10%2C E-value 4.6e-51;gbkey=misc_feature;gene=SCD20.03
NC_003888.3	RefSeq	sequence_feature	5007664	5007687	.	+	.	ID=id5735;Dbxref=GeneID:1100025;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD20.03
NC_003888.3	RefSeq	sequence_feature	5007964	5008008	.	+	.	ID=id5736;Dbxref=GeneID:1100025;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCD20.03
NC_003888.3	RefSeq	gene	5008487	5009416	.	+	.	ID=gene4633;Dbxref=GeneID:1100026;Name=SCD20.04;gbkey=Gene;gene=SCD20.04;gene_biotype=protein_coding;gene_synonym=SCD20.04;locus_tag=SCO4586
NC_003888.3	RefSeq	CDS	5008487	5009416	.	+	0	ID=cds4538;Parent=gene4633;Dbxref=Genbank:NP_628748.1,GeneID:1100026;Name=NP_628748.1;Note=SCD20.04%2C possible ABC transporter integral membrane protein%2C len: 309 aa%3B similar to TR:CAB75311 (EMBL:AL139164) Streptomyces coelicolor integral membrane protein SCC46.07c%2C 299 aa%3B fasta scores: opt: 412 z-score: 436.8 E(): 7.3e-17%3B 27.6%25 identity in 297 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD20.04;product=ABC transporter;protein_id=NP_628748.1;transl_table=11
NC_003888.3	RefSeq	gene	5009444	5010046	.	-	.	ID=gene4634;Dbxref=GeneID:1100027;Name=SCD20.05c;gbkey=Gene;gene=SCD20.05c;gene_biotype=protein_coding;gene_synonym=SCD20.05c;locus_tag=SCO4587
NC_003888.3	RefSeq	CDS	5009444	5010046	.	-	0	ID=cds4539;Parent=gene4634;Dbxref=Genbank:NP_628749.1,GeneID:1100027;Name=NP_628749.1;Note=SCD20.05c%2C hypothetical protein%2C len: 200 aa%3B similar to TR:P96726 (EMBL:Z92952) Bacillus subtilis hypothetical 20.5 kDa protein YwqN%2C 181 aa%3B fasta scores: opt: 357 z-score: 457.0 E(): 5.5e-18%3B 33.9%25 identity in 177 aa overlap;gbkey=CDS;gene=SCD20.05c;product=hypothetical protein;protein_id=NP_628749.1;transl_table=11
NC_003888.3	RefSeq	gene	5010182	5011708	.	+	.	ID=gene4635;Dbxref=GeneID:1100028;Name=SCD20.06;gbkey=Gene;gene=SCD20.06;gene_biotype=protein_coding;gene_synonym=SCD20.06;locus_tag=SCO4588
NC_003888.3	RefSeq	CDS	5010182	5011708	.	+	0	ID=cds4540;Parent=gene4635;Dbxref=Genbank:NP_628750.1,GeneID:1100028;Name=NP_628750.1;Note=SCD20.06%2C unknown%2C len: 508 aa;gbkey=CDS;gene=SCD20.06;product=hypothetical protein;protein_id=NP_628750.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5010959	5011135	.	+	.	ID=id5737;Dbxref=GeneID:1100028;Note=region rich in alanine and proline amino acid residues;gbkey=misc_feature;gene=SCD20.06
NC_003888.3	RefSeq	gene	5011745	5012719	.	-	.	ID=gene4636;Dbxref=GeneID:1100029;Name=SCD20.07c;gbkey=Gene;gene=SCD20.07c;gene_biotype=protein_coding;gene_synonym=SCD20.07c;locus_tag=SCO4589
NC_003888.3	RefSeq	CDS	5011745	5012719	.	-	0	ID=cds4541;Parent=gene4636;Dbxref=Genbank:NP_628751.1,GeneID:1100029;Name=NP_628751.1;Note=SCD20.07c%2C probable aminopeptidase (hypothetical protein)%2C len: 324 aa%3B similar to SW:APX_STRGR Streptomyces griseus aminopeptidase (EC 3.4.11.-) SgaP%2C 284 aa%3B fasta scores: opt: 1532 z-score: 1626.6 E(): 0%3B 76.8%25 identity in 276 aa overlap and to (EMBL:AL391754) Streptomyces coelicolor hydrolase SCK7.16c%2C 486 aa%3B fasta scores: opt: 980 z-score: 845.8 E(): 0%3B 52.1%25 identity in 288 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD20.07c;product=aminopeptidase;protein_id=NP_628751.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5012728	5012731	.	-	.	ID=id5738;gbkey=RBS
NC_003888.3	RefSeq	gene	5012930	5013400	.	-	.	ID=gene4637;Dbxref=GeneID:1100030;Name=SCD20.08c;gbkey=Gene;gene=SCD20.08c;gene_biotype=protein_coding;gene_synonym=SCD20.08c;locus_tag=SCO4590
NC_003888.3	RefSeq	CDS	5012930	5013400	.	-	0	ID=cds4542;Parent=gene4637;Dbxref=Genbank:NP_628752.1,GeneID:1100030;Name=NP_628752.1;Note=SCD20.08c%2C hypothetical protein%2C len: 156 aa%3B similar to TR:CAB86125 (EMBL:AL163003) Streptomyces coelicolor hypothetical 16.0 kDa protein SCC24.31c%2C 142 aa%3B fasta scores: opt: 205 z-score: 265.0 E(): 2.7e-07%3B 34.0%25 identity in 156 aa overlap;gbkey=CDS;gene=SCD20.08c;product=hypothetical protein;protein_id=NP_628752.1;transl_table=11
NC_003888.3	RefSeq	gene	5013530	5014102	.	+	.	ID=gene4638;Dbxref=GeneID:1100031;Name=SCD20.09;gbkey=Gene;gene=SCD20.09;gene_biotype=protein_coding;gene_synonym=SCD20.09;locus_tag=SCO4591
NC_003888.3	RefSeq	CDS	5013530	5014102	.	+	0	ID=cds4543;Parent=gene4638;Dbxref=Genbank:NP_628753.1,GeneID:1100031;Name=NP_628753.1;Note=SCD20.09%2C hypothetical protein%2C len: 190 aa%3B similar to TR:Q9RJT3 (EMBL:AL132707) Streptomyces coelicolor hypothetical 21.7 kDa protein SCF51.02c%2C 205 aa%3B fasta scores: opt: 325 z-score: 395.2 E(): 1.5e-14%3B 40.4%25 identity in 166 aa overlap;gbkey=CDS;gene=SCD20.09;product=hypothetical protein;protein_id=NP_628753.1;transl_table=11
NC_003888.3	RefSeq	gene	5014126	5015214	.	-	.	ID=gene4639;Dbxref=GeneID:1100032;Name=SCD20.10c;gbkey=Gene;gene=SCD20.10c;gene_biotype=protein_coding;gene_synonym=SCD20.10c;locus_tag=SCO4592
NC_003888.3	RefSeq	CDS	5014126	5015214	.	-	0	ID=cds4544;Parent=gene4639;Dbxref=Genbank:NP_628754.1,GeneID:1100032;Name=NP_628754.1;Note=SCD20.10c%2C possible integral membrane protein%2C len: 362 aa%3B similar to SW:RARD_ECOLI (EMBL:L02122) Escherichia coli RarD protein%2C 296 aa%3B fasta scores: opt: 792 z-score: 820.5 E(): 0%3B 42.3%25 identity in 291 aa overlap. Contains Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD20.10c;product=hypothetical protein;protein_id=NP_628754.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5014153	5014194	.	-	.	ID=id5739;Dbxref=GeneID:1100032;Note=100%25 glutamine amino acid residues;gbkey=misc_feature;gene=SCD20.10c
NC_003888.3	RefSeq	sequence_feature	5014771	5015154	.	-	.	ID=id5740;Dbxref=GeneID:1100032;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 40.30%2C E-value 4.4e-08;gbkey=misc_feature;gene=SCD20.10c
NC_003888.3	RefSeq	ribosome_entry_site	5015218	5015226	.	-	.	ID=id5741;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	5015288	5015329	.	-	.	ID=id5742;Note=possible stem loop. Score 50: 18/19 (94%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5015360	5016214	.	-	.	ID=gene4640;Dbxref=GeneID:1100033;Name=SCD20.11c;gbkey=Gene;gene=SCD20.11c;gene_biotype=protein_coding;gene_synonym=SCD20.11c;locus_tag=SCO4593
NC_003888.3	RefSeq	CDS	5015360	5016214	.	-	0	ID=cds4545;Parent=gene4640;Dbxref=Genbank:NP_628755.1,GeneID:1100033;Name=NP_628755.1;Note=SCD20.11c%2C conserved hypothetical protein%2C len: 284 aa%3B similar to SW:YTFG_ECOLI (EMBL:U14003) Escherichia coli hypothetical 29%2C7 kDa protein in RplI-CpdB intergenic region YtfG%2C 286 aa%3B fasta scores: opt: 801 z-score: 906.2 E(): 0%3B 47.1%25 identity in 280 aa overlap;gbkey=CDS;gene=SCD20.11c;product=hypothetical protein;protein_id=NP_628755.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5016225	5016230	.	-	.	ID=id5743;gbkey=RBS
NC_003888.3	RefSeq	gene	5016376	5017434	.	-	.	ID=gene4641;Dbxref=GeneID:1100034;Name=SCD20.12c;gbkey=Gene;gene=SCD20.12c;gene_biotype=protein_coding;gene_synonym=SCD20.12c;locus_tag=SCO4594
NC_003888.3	RefSeq	CDS	5016376	5017434	.	-	0	ID=cds4546;Parent=gene4641;Dbxref=Genbank:NP_628756.1,GeneID:1100034;Name=NP_628756.1;Note=catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin;gbkey=CDS;gene=SCD20.12c;product=2-oxoglutarate ferredoxin oxidoreductase subunit beta;protein_id=NP_628756.1;transl_table=11
NC_003888.3	RefSeq	gene	5017427	5019364	.	-	.	ID=gene4642;Dbxref=GeneID:1100035;Name=SCD20.13c;gbkey=Gene;gene=SCD20.13c;gene_biotype=protein_coding;gene_synonym=SCD20.13c;locus_tag=SCO4595
NC_003888.3	RefSeq	CDS	5017427	5019364	.	-	0	ID=cds4547;Parent=gene4642;Dbxref=Genbank:NP_628757.1,GeneID:1100035;Name=NP_628757.1;Note=SCD20.13c%2C probable oxidoreductase%2C len: 645 aa%3B highly similar to TR:Q9RKS4 (EMBL:AL132824) Streptomyces coelicolor  oxidoreductase alpha-subunit SCAH10.35c%2C 630 aa%3B fasta scores: opt: 4069 z-score: 4338.6 E(): 0%3B 98.7%25 identity in 627 aa overlap and C-terminal domain similar to TR:O68228 (EMBL:AF021094) Helicobacter pylori OorA subunit of 2-oxoglutarate:acceptor oxidoreductase%2C 371 aa%3B fasta scores: opt: 495 z-score: 532.2 E(): 3.6e-22%3B 31.0%25 identity in 352 aa overlap. Contains Pfam match to entry PF01855 POR_N%2C Pyruvate flavodoxin/ferredoxin oxidoreductase (N terminus);gbkey=CDS;gene=SCD20.13c;product=oxidoreductase;protein_id=NP_628757.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5017441	5017447	.	-	.	ID=id5744;Dbxref=GeneID:1100035;gbkey=RBS;gene=SCD20.13c
NC_003888.3	RefSeq	sequence_feature	5017562	5018449	.	-	.	ID=id5745;Dbxref=GeneID:1100035;Note=Pfam match to entry PF01855 POR_N%2C Pyruvate flavodoxin/ferredoxin oxidoreductase (N terminus)%2C score 250.60%2C E-value 2.1e-71;gbkey=misc_feature;gene=SCD20.13c
NC_003888.3	RefSeq	ribosome_entry_site	5019373	5019378	.	-	.	ID=id5746;gbkey=RBS
NC_003888.3	RefSeq	gene	5019699	5020370	.	-	.	ID=gene4643;Dbxref=GeneID:1100036;Name=SCD20.14c;gbkey=Gene;gene=SCD20.14c;gene_biotype=protein_coding;gene_synonym=SCD20.14c;locus_tag=SCO4596
NC_003888.3	RefSeq	CDS	5019699	5020370	.	-	0	ID=cds4548;Parent=gene4643;Dbxref=Genbank:NP_628758.1,GeneID:1100036;Name=NP_628758.1;Note=SCD20.14c%2C possible two-component system response regulator%2C len: 252 aa%3B similar to TR:CAB92834 (EMBL:AL356892) Streptomyces coelicolor two-component response regulator SCC8A.16c%2C 212 aa%3B fasta scores: opt: 831 z-score: 957.0 E(): 0%3B 62.7%25 identity in 217 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Also contains possible helix-turn-helix motif at residues 204..225 (+2.83 SD);gbkey=CDS;gene=SCD20.14c;product=two-component system response regulator;protein_id=NP_628758.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5019702	5019902	.	-	.	ID=id5747;Dbxref=GeneID:1100036;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 44.00%2C E-value 3.4e-09;gbkey=misc_feature;gene=SCD20.14c
NC_003888.3	RefSeq	sequence_feature	5019993	5020358	.	-	.	ID=id5748;Dbxref=GeneID:1100036;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 52.90%2C E-value 7e-12;gbkey=misc_feature;gene=SCD20.14c
NC_003888.3	RefSeq	ribosome_entry_site	5020374	5020377	.	-	.	ID=id5749;gbkey=RBS
NC_003888.3	RefSeq	gene	5020678	5022045	.	-	.	ID=gene4644;Dbxref=GeneID:1100037;Name=SCD20.15c;gbkey=Gene;gene=SCD20.15c;gene_biotype=protein_coding;gene_synonym=SCD20.15c;locus_tag=SCO4597
NC_003888.3	RefSeq	CDS	5020678	5022045	.	-	0	ID=cds4549;Parent=gene4644;Dbxref=Genbank:NP_628759.1,GeneID:1100037;Name=NP_628759.1;Note=SCD20.15c%2C possible two-component system sensor kinase%2C len: 455 aa%3B similar to TR:CAB81858 (EMBL:AL161691) Streptomyces coelicolor two-component sensor kinase SCD40A.13%2C 431 aa%3B fasta scores: opt: 754 z-score: 831.1 E(): 0%3B 40.2%25 identity in 433 aa overlap and to Streptomyces coelicolor two-component system sensor kinase SCD20.16c%2C 407 aa%3B fasta scores: opt: 1179 z-score: 1127.3 E(): 0%3B 57.5%25 identity in 442 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD20.15c;product=two-component system sensor kinase;protein_id=NP_628759.1;transl_table=11
NC_003888.3	RefSeq	gene	5022159	5023382	.	-	.	ID=gene4645;Dbxref=GeneID:1100038;Name=SCD20.16c;gbkey=Gene;gene=SCD20.16c;gene_biotype=protein_coding;gene_synonym=SCD20.16c;locus_tag=SCO4598
NC_003888.3	RefSeq	CDS	5022159	5023382	.	-	0	ID=cds4550;Parent=gene4645;Dbxref=Genbank:NP_628760.1,GeneID:1100038;Name=NP_628760.1;Note=SCD20.16c%2C possible two-component system sensor kinase%2C len: 407 aa%3B similar to TR:CAB81858 (EMBL:AL161691) Streptomyces coelicolor two-component sensor kinase SCD40A.13%2C 431 aa%3B fasta scores: opt: 659 z-score: 729.4 E(): 0%3B 37.0%25 identity in 427 aa overlap and to Streptomyces coelicolor two-component system sensor kinase SCD20.15c%2C 455 aa%3B fasta scores: opt: 1179 z-score: 1124.4 E(): 0%3B 57.2%25 identity in 442 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD20.16c;product=two-component system sensor kinase;protein_id=NP_628760.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5023567	5023570	.	+	.	ID=id5750;gbkey=RBS
NC_003888.3	RefSeq	gene	5023578	5024018	.	+	.	ID=gene4646;Dbxref=GeneID:1100039;Name=nuoA2;gbkey=Gene;gene=nuoA2;gene_biotype=protein_coding;gene_synonym=nuoA2,SCD20.17;locus_tag=SCO4599
NC_003888.3	RefSeq	CDS	5023578	5024018	.	+	0	ID=cds4551;Parent=gene4646;Dbxref=Genbank:NP_628761.1,GeneID:1100039;Name=NP_628761.1;Note=SCD20.17%2C nuoA2%2C NADH dehydrogenase subunit%2C len: 146 aa%3B similar to SW:NUOA_RHOCA (EMBL:AF029365) Rhodobacter capsulatus NADH dehydrogenase I chain A (EC 1.6.5.3) NuoA%2C 126 aa%3B fasta scores: opt: 260 z-score: 336.3 E(): 2.9e-11%3B 36.2%25 identity in 130 aa overlap and to TR:Q9XAQ4 (EMBL:AL078618) Streptomyces coelicolor NuoA%2C NADH dehydrogenase subunit SCD16A.21c%2C 119 aa%3B fasta scores: opt: 231 z-score: 278.0 E(): 7.5e-10%3B 31.4%25 identity in 118 aa overlap. Contains Pfam match to entry PF00507 oxidored_q4%2C NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=nuoA2;product=NADH dehydrogenase subunit NuoA2;protein_id=NP_628761.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5023764	5024012	.	+	.	ID=id5751;Dbxref=GeneID:1100039;Note=Pfam match to entry PF00507 oxidored_q4%2C NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3%2C score 71.30%2C E-value 1.3e-20;gbkey=misc_feature;gene=nuoA2
NC_003888.3	RefSeq	gene	5024015	5024713	.	+	.	ID=gene4647;Dbxref=GeneID:1100040;Name=nuoB2;gbkey=Gene;gene=nuoB2;gene_biotype=protein_coding;gene_synonym=nuoB2,SCD20.18;locus_tag=SCO4600
NC_003888.3	RefSeq	CDS	5024015	5024713	.	+	0	ID=cds4552;Parent=gene4647;Dbxref=Genbank:NP_628762.1,GeneID:1100040;Name=NP_628762.1;Note=SCD20.18%2C nuoB2%2C NADH dehydrogenase subunit%2C len: 232 aa%3B similar to SW:NUKM_BRAOL (EMBL:X82274) Brassica oleracea NADH-ubiquinone oxidoreductase 20 kDa subunit precursor (EC 1.6.5.3) NukM%2C 215 aa%3B fasta scores: opt: 626 z-score: 616.8 E(): 6.9e-27%3B 52.4%25 identity in 166 aa overlap%2C to SW:NUOB_ECOLI (EMBL:X68301) Escherichia coli NADH dehydrogenase I chain B (EC 1.6.5.3) NuoB%2C 220 aa%3B fasta scores: opt: 583 z-score: 575.3 E(): 1.4e-24%3B 58.1%25 identity in 136 aa overlap and to TR:Q9XAQ5 (EMBL:AL07861) Streptomyces coelicolor SCD16A.20c%2C NuoB%2C NADH dehydrogenase subunit%2C 184 aa%3B fasta scores: opt: 531 z-score: 455.5 E(): 9.8e-20%3B 50.7%25 identity in 136 aa overlap. Contains Pfam match to entry PF01058 oxidored_q6%2C NADH ubiquinone oxidoreductase%2C 20 Kd subunit and possible hydrophobic membrane spanning region;gbkey=CDS;gene=nuoB2;product=NADH dehydrogenase subunit NuoB2;protein_id=NP_628762.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5024177	5024503	.	+	.	ID=id5752;Dbxref=GeneID:1100040;Note=Pfam match to entry PF01058 oxidored_q6%2C NADH ubiquinone oxidoreductase%2C 20 Kd subunit%2C score 178.60%2C E-value 9.8e-50;gbkey=misc_feature;gene=nuoB2
NC_003888.3	RefSeq	sequence_feature	5024591	5024677	.	+	.	ID=id5753;Dbxref=GeneID:1100040;Note=region rich in proline%2C glutamic acid and glycine amino acid residues. High in G+C content (86.2%25);gbkey=misc_feature;gene=nuoB2
NC_003888.3	RefSeq	ribosome_entry_site	5024703	5024706	.	+	.	ID=id5754;Dbxref=GeneID:1100040;gbkey=RBS;gene=nuoB2
NC_003888.3	RefSeq	gene	5024710	5026071	.	+	.	ID=gene4648;Dbxref=GeneID:1100041;Name=SCD39.01;gbkey=Gene;gene=SCD39.01;gene_biotype=protein_coding;gene_synonym=SCD39.01;locus_tag=SCO4601
NC_003888.3	RefSeq	CDS	5024710	5026071	.	+	0	ID=cds4553;Parent=gene4648;Dbxref=Genbank:NP_628763.1,GeneID:1100041;Name=NP_628763.1;Note=SCD39.01%2C possible dehydrogenase%2C len: 453 aa%3B N-terminal region similar to SW:NUC1_RHIME (EMBL:AF055637) Rhizobium meliloti NADH dehydrogenase I chain C1 (EC 1.6.5.3) NuoC%2C 201 aa%3B blastp scores: Score %3D 201 (70.8 bits)%2C Expect %3D 1.7e-15%2C P %3D 1.7e-15%3B Identities %3D 49/134 (36%25)%2C Positives %3D 69/134 (51%25). Contains Pfam match to entry PF00329 complex1_30Kd%2C Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit. Contains 2x conserved repeat: PRRSRSASQGSASQR and rich region in alanine%2C proline and glutamic acid amino acid residues both at C-terminal domain;gbkey=CDS;gene=SCD39.01;product=dehydrogenase;protein_id=NP_628763.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5024956	5025147	.	+	.	ID=id5755;Dbxref=GeneID:1100041;Note=Pfam match to entry PF00329 complex1_30Kd%2C Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit%2C score 88.30%2C E-value 8.1e-23;gbkey=misc_feature;gene=SCD39.01
NC_003888.3	RefSeq	repeat_region	5025538	5025582	.	+	.	ID=id5756;Dbxref=GeneID:1100041;gbkey=repeat_region;gene=SCD39.01
NC_003888.3	RefSeq	repeat_region	5025697	5025741	.	+	.	ID=id5757;Dbxref=GeneID:1100041;gbkey=repeat_region;gene=SCD39.01
NC_003888.3	RefSeq	sequence_feature	5025898	5025996	.	+	.	ID=id5758;Dbxref=GeneID:1100041;Note=region rich in alanine%2C proline and glutamic acid amino acid residues;gbkey=misc_feature;gene=SCD39.01
NC_003888.3	RefSeq	ribosome_entry_site	5026054	5026061	.	+	.	ID=id5759;Dbxref=GeneID:1100041;gbkey=RBS;gene=SCD39.01
NC_003888.3	RefSeq	gene	5026068	5027036	.	+	.	ID=gene4649;Dbxref=GeneID:1100042;Name=nuoH2;gbkey=Gene;gene=nuoH2;gene_biotype=protein_coding;gene_synonym=nuoH2,SCD39.02;locus_tag=SCO4602
NC_003888.3	RefSeq	CDS	5026068	5027036	.	+	0	ID=cds4554;Parent=gene4649;Dbxref=Genbank:NP_628764.1,GeneID:1100042;Name=NP_628764.1;Note=SCD39.02%2C nuoH2%2C NADH dehydrogenase subunit%2C len: 322 aa%3B similar to SW:NUOH_ECOLI (EMBL:X68301) Escherichia coli NADH dehydrogenase I chain H (EC 1.6.5.3) NuoH%2C 325 aa%3B fasta scores: opt: 715 z-score: 812.7 E(): 0%3B 37.5%25 identity in 317 aa overlap and to TR:Q9XAR1 (EMBL:AL078618) Streptomyces coelicolor SCD16A.14c NuoH%2C NADH dehydrogenase subunit%2C 467 aa%3B fasta scores: opt: 444 z-score: 437.6 E(): 9.7e-19%3B 37.9%25 identity in 335 aa overlap. Contains Pfam match to entry PF00146 NADHdh%2C NADH dehydrogenases and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=nuoH2;product=NADH dehydrogenase subunit NuoH2;protein_id=NP_628764.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5026158	5027027	.	+	.	ID=id5760;Dbxref=GeneID:1100042;Note=Pfam match to entry PF00146 NADHdh%2C NADH dehydrogenases%2C score 255.50%2C E-value 7.1e-73;gbkey=misc_feature;gene=nuoH2
NC_003888.3	RefSeq	gene	5027036	5027629	.	+	.	ID=gene4650;Dbxref=GeneID:1100043;Name=nuoI2;gbkey=Gene;gene=nuoI2;gene_biotype=protein_coding;gene_synonym=nuoI2,SCD39.03;locus_tag=SCO4603
NC_003888.3	RefSeq	CDS	5027036	5027629	.	+	0	ID=cds4555;Parent=gene4650;Dbxref=Genbank:NP_628765.1,GeneID:1100043;Name=NP_628765.1;Note=SCD39.03%2C nuoI2%2C NADH dehydrogenase subunit%2C len: 197 aa%3B similar to SW:NQO9_THETH (EMBL:U52917) Thermus aquaticus NADH-ubiquinone oxidoreductase chain 9 (EC 1.6.5.3) Nqo9%2C 182 aa%3B fasta scores: opt: 263 z-score: 292.1 E(): 8.4e-09%3B 34.9%25 identity in 146 aa overlap and to TR:Q9XAR2 (EMBL:AL078618) Streptomyces coelicolor SCD16A.13c NuoI%2C NADH dehydrogenase subunit%2C 211 aa%3B fasta scores: opt: 295 z-score: 305.4 E(): 2.3e-11%3B 34.9%25 identity in 166 aa overlap. Contains 2x Pfam matches to entry PF00037 fer4%2C 4Fe-4S binding domain and 2x matches to Prosite entry PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=nuoI2;product=NADH dehydrogenase subunit NuoI2;protein_id=NP_628765.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5027165	5027236	.	+	.	ID=id5761;Dbxref=GeneID:1100043;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 13.80%2C E-value 0.019;gbkey=misc_feature;gene=nuoI2
NC_003888.3	RefSeq	sequence_feature	5027186	5027221	.	+	.	ID=id5762;Dbxref=GeneID:1100043;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=nuoI2
NC_003888.3	RefSeq	sequence_feature	5027312	5027383	.	+	.	ID=id5763;Dbxref=GeneID:1100043;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 35.60%2C E-value 1.1e-06;gbkey=misc_feature;gene=nuoI2
NC_003888.3	RefSeq	sequence_feature	5027333	5027368	.	+	.	ID=id5764;Dbxref=GeneID:1100043;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=nuoI2
NC_003888.3	RefSeq	ribosome_entry_site	5027612	5027618	.	+	.	ID=id5765;Dbxref=GeneID:1100043;gbkey=RBS;gene=nuoI2
NC_003888.3	RefSeq	gene	5027626	5028219	.	+	.	ID=gene4651;Dbxref=GeneID:1100044;Name=nuoJ2;gbkey=Gene;gene=nuoJ2;gene_biotype=protein_coding;gene_synonym=nuoJ2,SCD39.04;locus_tag=SCO4604
NC_003888.3	RefSeq	CDS	5027626	5028219	.	+	0	ID=cds4556;Parent=gene4651;Dbxref=Genbank:NP_628766.1,GeneID:1100044;Name=NP_628766.1;Note=SCD39.04%2C nuoJ2%2C NADH dehydrogenase subunit%2C len: 197 aa%3B similar to SW:NU6C_SYNY3 (EMBL:X62517) Synechocystis sp. NADH-plastoquinone oxidoreductase chain 6 (EC 1.6.5.3) NdhG%2C 198 aa%3B fasta scores: opt: 311 z-score: 383.0 E(): 7.2e-14%3B 35.7%25 identity in 185 aa overlap and to TR:Q9XAR3 (EMBL:AL078618) Streptomyces coelicolor SCD16A.12c NuoJ%2C NADH dehydrogenase subunit%2C 285 aa%3B fasta scores: opt: 278 z-score: 288.5 E(): 2e-10%3B 33.1%25 identity in 181 aa overlap. Contains Pfam match to entry PF00499 oxidored_q3%2C NADH-ubiquinone/plastoquinone oxidoreductase chain 6 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=nuoJ2;product=NADH dehydrogenase subunit NuoJ2;protein_id=NP_628766.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5027671	5028150	.	+	.	ID=id5766;Dbxref=GeneID:1100044;Note=Pfam match to entry PF00499 oxidored_q3%2C NADH-ubiquinone/plastoquinone oxidoreductase chain 6%2C score 38.30%2C E-value 8.1e-08;gbkey=misc_feature;gene=nuoJ2
NC_003888.3	RefSeq	gene	5028219	5028611	.	+	.	ID=gene4652;Dbxref=GeneID:1100045;Name=nuoK2;gbkey=Gene;gene=nuoK2;gene_biotype=protein_coding;gene_synonym=nuoK2,SCD39.05;locus_tag=SCO4605
NC_003888.3	RefSeq	CDS	5028219	5028611	.	+	0	ID=cds4557;Parent=gene4652;Dbxref=Genbank:NP_628767.1,GeneID:1100045;Name=NP_628767.1;Note=SCD39.05%2C nuoK2%2C NADH dehydrogenase subunit%2C len: 130 aa%3B similar to SW:NULC_SYNY3 (EMBL:X62517) Synechocystis sp. NADH-plastoquinone oxidoreductase chain 4L (EC 1.6.5.3) NdhE%2C 103 aa%3B fasta scores: opt: 315 z-score: 414.1 E(): 1.3e-15%3B 50.0%25 identity in 100 aa overlap and to TR:Q9XAR4 (EMBL:AL078618) Streptomyces coelicolor SCD16A.11c%2C NuoK%2C NADH dehydrogenase subunit%2C 99 aa%3B fasta scores: opt: 251 z-score: 292.3 E(): 1.2e-10%3B 48.9%25 identity in 90 aa overlap. Contains Pfam match to entry PF00420 oxidored_q2%2C NADH-ubiquinone/plastoquinone oxidoreductase chain 4L and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=nuoK2;product=NADH dehydrogenase subunit NuoK2;protein_id=NP_628767.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5028219	5028518	.	+	.	ID=id5767;Dbxref=GeneID:1100045;Note=Pfam match to entry PF00420 oxidored_q2%2C NADH-ubiquinone/plastoquinone oxidoreductase chain 4L%2C score 73.30%2C E-value 5.6e-19;gbkey=misc_feature;gene=nuoK2
NC_003888.3	RefSeq	ribosome_entry_site	5028597	5028600	.	+	.	ID=id5768;Dbxref=GeneID:1100045;gbkey=RBS;gene=nuoK2
NC_003888.3	RefSeq	gene	5028608	5030602	.	+	.	ID=gene4653;Dbxref=GeneID:1100046;Name=nuoL2;gbkey=Gene;gene=nuoL2;gene_biotype=protein_coding;gene_synonym=nuoL2,SCD39.06;locus_tag=SCO4606
NC_003888.3	RefSeq	CDS	5028608	5030602	.	+	0	ID=cds4558;Parent=gene4653;Dbxref=Genbank:NP_628768.1,GeneID:1100046;Name=NP_628768.1;Note=SCD39.06%2C nuoL2%2C NADH dehydrogenase subunit%2C len: 664 aa%3B similar to SW:NU5C_SYNP2 (EMBL:M99378) Synechococcus sp. NADH-plastoquinone oxidoreductase chain 5 (EC 1.6.5.3) NdhF%2C 664 aa%3B fasta scores: opt: 997 z-score: 1098.6 E(): 0%3B 33.7%25 identity in 701 aa overlap and to TR:Q9XAR5 (EMBL:AL078618) Streptomyces coelicolor SCD16A.10c%2C NuoL%2C NADH dehydrogenase subunit%2C 654 aa%3B fasta scores: opt: 902 z-score: 801.3 E(): 0%3B 33.3%25 identity in 681 aa overlap. Contains Pfam matches to entries PF00662 oxidored_q1_N%2C NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus and PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=nuoL2;product=NADH dehydrogenase subunit NuoL2;protein_id=NP_628768.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5028809	5028970	.	+	.	ID=id5769;Dbxref=GeneID:1100046;Note=Pfam match to entry PF00662 oxidored_q1_N%2C NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus%2C score 23.20%2C E-value 0.00016;gbkey=misc_feature;gene=nuoL2
NC_003888.3	RefSeq	sequence_feature	5029001	5029909	.	+	.	ID=id5770;Dbxref=GeneID:1100046;Note=Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 286.60%2C E-value 3.2e-82;gbkey=misc_feature;gene=nuoL2
NC_003888.3	RefSeq	gene	5030609	5032213	.	+	.	ID=gene4654;Dbxref=GeneID:1100047;Name=nuoM2;gbkey=Gene;gene=nuoM2;gene_biotype=protein_coding;gene_synonym=nuoM2,SCD39.07;locus_tag=SCO4607
NC_003888.3	RefSeq	CDS	5030609	5032213	.	+	0	ID=cds4559;Parent=gene4654;Dbxref=Genbank:NP_628769.1,GeneID:1100047;Name=NP_628769.1;Note=SCD39.07%2C nuoM2%2C NADH dehydrogenase subunit%2C len: 534 aa%3B similar to SW:NUOM_ECOLI (EMBL:X68301) Escherichia coli NADH dehydrogenase I chain M (EC 1.6.5.3) NuoM%2C 509 aa%3B fasta scores: opt: 721 z-score: 798.7 E(): 0%3B 33.9%25 identity in 528 aa overlap and to TR:Q9XAR6 (EMBL:AL078618) Streptomyces coelicolor SCD16A.09c%2C NuoM%2C NADH dehydrogenase subunit%2C 523 aa%3B fasta scores: opt: 462 z-score: 441.4 E(): 6e-19%3B 34.1%25 identity in 537 aa overlap. Contains Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=nuoM2;product=NADH dehydrogenase subunit NuoM2;protein_id=NP_628769.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5031068	5031994	.	+	.	ID=id5771;Dbxref=GeneID:1100047;Note=Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 216.70%2C E-value 3.4e-61;gbkey=misc_feature;gene=nuoM2
NC_003888.3	RefSeq	ribosome_entry_site	5032197	5032203	.	+	.	ID=id5772;Dbxref=GeneID:1100047;gbkey=RBS;gene=nuoM2
NC_003888.3	RefSeq	gene	5032210	5033757	.	+	.	ID=gene4655;Dbxref=GeneID:1100048;Name=nuoN2;gbkey=Gene;gene=nuoN2;gene_biotype=protein_coding;gene_synonym=nuoN2,SCD39.08;locus_tag=SCO4608
NC_003888.3	RefSeq	CDS	5032210	5033757	.	+	0	ID=cds4560;Parent=gene4655;Dbxref=Genbank:NP_628770.1,GeneID:1100048;Name=NP_628770.1;Note=SCD39.08%2C nuoN2%2C NADH dehydrogenase subunit%2C len: 515 aa%3B similar to SW:NUON_ECOLI (EMBL:X68301) Escherichia coli NADH dehydrogenase I chain N (EC 1.6.5.3) NuoN%2C 425 aa%3B fasta scores: opt: 601 z-score: 679.6 E(): 2.2e-30%3B 31.6%25 identity in 418 aa overlap and to TR:Q9XAR7 (EMBL:AL078618) Streptomyces coelicolor SCD16A.08c%2C NuoN%2C NADH dehydrogenase subunit%2C 552 aa%3B fasta scores: opt: 346 z-score: 334.0 E(): 5.7e-13%3B 32.0%25 identity in 563 aa overlap. Contains Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains and match to Prosite entry PS01023 PTR2 family proton/oligopeptide symporters signature 2. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=nuoN2;product=NADH dehydrogenase subunit NuoN2;protein_id=NP_628770.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5032660	5033583	.	+	.	ID=id5773;Dbxref=GeneID:1100048;Note=Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 147.60%2C E-value 1.2e-40;gbkey=misc_feature;gene=nuoN2
NC_003888.3	RefSeq	sequence_feature	5033308	5033346	.	+	.	ID=id5774;Dbxref=GeneID:1100048;Note=PS01023 PTR2 family proton/oligopeptide symporters signature 2;gbkey=misc_feature;gene=nuoN2
NC_003888.3	RefSeq	ribosome_entry_site	5033972	5033976	.	+	.	ID=id5775;gbkey=RBS
NC_003888.3	RefSeq	gene	5033984	5034847	.	+	.	ID=gene4656;Dbxref=GeneID:1100049;Name=SCD39.09;gbkey=Gene;gene=SCD39.09;gene_biotype=protein_coding;gene_synonym=SCD39.09;locus_tag=SCO4609
NC_003888.3	RefSeq	CDS	5033984	5034847	.	+	0	ID=cds4561;Parent=gene4656;Dbxref=Genbank:NP_628771.1,GeneID:1100049;Name=NP_628771.1;Note=metalloprotease;gbkey=CDS;gene=SCD39.09;product=heat shock protein HtpX;protein_id=NP_628771.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5034206	5034820	.	+	.	ID=id5776;Dbxref=GeneID:1100049;Note=Pfam match to entry PF01435 Peptidase_M48%2C Peptidase family M48%2C score 103.90%2C E-value 3.2e-27;gbkey=misc_feature;gene=SCD39.09
NC_003888.3	RefSeq	sequence_feature	5034371	5034400	.	+	.	ID=id5777;Dbxref=GeneID:1100049;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SCD39.09
NC_003888.3	RefSeq	gene	5034844	5035260	.	+	.	ID=gene4657;Dbxref=GeneID:1100050;Name=SCD39.10;gbkey=Gene;gene=SCD39.10;gene_biotype=protein_coding;gene_synonym=SCD39.10;locus_tag=SCO4610
NC_003888.3	RefSeq	CDS	5034844	5035260	.	+	0	ID=cds4562;Parent=gene4657;Dbxref=Genbank:NP_628772.1,GeneID:1100050;Name=NP_628772.1;Note=SCD39.10%2C possible integral membrane protein%2C len: 138 aa%3B similar to TR:O53882 (EMBL:AL022004) Mycobacterium tuberculosis hypothetical 13.7 kDa protein MTV043.63c%2C 129 aa%3B fasta scores: opt: 509 z-score: 623.4 E(): 3e-27%3B 63.1%25 identity in 122 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD39.10;product=hypothetical protein;protein_id=NP_628772.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5035261	5035264	.	+	.	ID=id5778;gbkey=RBS
NC_003888.3	RefSeq	gene	5035358	5035951	.	+	.	ID=gene4658;Dbxref=GeneID:1100051;Name=SCD39.11;gbkey=Gene;gene=SCD39.11;gene_biotype=protein_coding;gene_synonym=SCD39.11;locus_tag=SCO4611
NC_003888.3	RefSeq	CDS	5035358	5035951	.	+	0	ID=cds4563;Parent=gene4658;Dbxref=Genbank:NP_628773.1,GeneID:1100051;Name=NP_628773.1;Note=SCD39.11%2C unknown%2C len: 197 aa;gbkey=CDS;gene=SCD39.11;product=hypothetical protein;protein_id=NP_628773.1;transl_table=11
NC_003888.3	RefSeq	gene	5036030	5037274	.	-	.	ID=gene4659;Dbxref=GeneID:1100052;Name=SCD39.12c;gbkey=Gene;gene=SCD39.12c;gene_biotype=protein_coding;gene_synonym=SCD39.12c;locus_tag=SCO4612
NC_003888.3	RefSeq	CDS	5036030	5037274	.	-	0	ID=cds4564;Parent=gene4659;Dbxref=Genbank:NP_628774.1,GeneID:1100052;Name=NP_628774.1;Note=SCD39.12c%2C possible amino acid transporter%2C len: 414 aa%3B similar to SW:YJ99_MYCTU (EMBL:Z74025) Mycobacterium tuberculosis hypothetical 45.3 kDa transport protein MTVY39.19%2C 440 aa%3B fasta scores: opt: 1985 z-score: 2014.9 E(): 0%3B 79.0%25 identity in 404 aa overlap. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD39.12c;product=amino acid transporter;protein_id=NP_628774.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5036045	5037253	.	-	.	ID=id5779;Dbxref=GeneID:1100052;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -140.60%2C E-value 2.1e-07;gbkey=misc_feature;gene=SCD39.12c
NC_003888.3	RefSeq	gene	5037414	5037680	.	+	.	ID=gene4660;Dbxref=GeneID:1100053;Name=SCD39.13;gbkey=Gene;gene=SCD39.13;gene_biotype=protein_coding;gene_synonym=SCD39.13;locus_tag=SCO4613
NC_003888.3	RefSeq	CDS	5037414	5037680	.	+	0	ID=cds4565;Parent=gene4660;Dbxref=Genbank:NP_628775.1,GeneID:1100053;Name=NP_628775.1;Note=SCD39.13%2C possible integral membrane protein%2C len: 88 aa%3B similar to SW:YEAQ_ECOLI (EMBL:AE000274) Escherichia coli hypothetical 8.7 kDa protein in GapA-Rnd intergenic region YeaQ%2C 82 aa%3B fasta scores: opt: 233 z-score: 300.6 E(): 2.8e-09%3B 42.5%25 identity in 80 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD39.13;product=hypothetical protein;protein_id=NP_628775.1;transl_table=11
NC_003888.3	RefSeq	gene	5037788	5038276	.	-	.	ID=gene4661;Dbxref=GeneID:1100054;Name=SCD39.14c;gbkey=Gene;gene=SCD39.14c;gene_biotype=protein_coding;gene_synonym=SCD39.14c;locus_tag=SCO4614
NC_003888.3	RefSeq	CDS	5037788	5038276	.	-	0	ID=cds4566;Parent=gene4661;Dbxref=Genbank:NP_628776.1,GeneID:1100054;Name=NP_628776.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;gene=SCD39.14c;product=nucleotide-binding protein;protein_id=NP_628776.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5038489	5040500	.	-	.	ID=id5780;Note=previously sequenced DNA fragment. EMBL:X71358 S.coelicolor plasmid SPL1 DNA for xis and int genes and EMBL:K03469 Plasmid SLP1 integrated in S. coelicolor genome%2C left and right junctions.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5038489	5038668	.	+	.	ID=id5781;Note=EMBL:K03471 Streptomyces lividans SLP1 insertion site (attB).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5038512	5038593	.	+	.	ID=gene4662;Dbxref=GeneID:3240051;Name=SCOt48;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt48
NC_003888.3	RefSeq	tRNA	5038512	5038593	.	+	.	ID=rna65;Parent=gene4662;Dbxref=GeneID:3240051;Note=tRNA Tyr anticodon GTA%2C Cove score 63.32;gbkey=tRNA;product=tRNA-Tyr
NC_003888.3	RefSeq	exon	5038512	5038593	.	+	.	ID=id5782;Parent=rna65;Dbxref=GeneID:3240051;Note=tRNA Tyr anticodon GTA%2C Cove score 63.32;gbkey=tRNA;product=tRNA-Tyr
NC_003888.3	RefSeq	gene	5038758	5040125	.	-	.	ID=gene4663;Dbxref=GeneID:1100055;Name=SCD39.15c;gbkey=Gene;gene=SCD39.15c;gene_biotype=protein_coding;gene_synonym=SCD39.15c;locus_tag=SCO4615
NC_003888.3	RefSeq	CDS	5038758	5040125	.	-	0	ID=cds4567;Parent=gene4663;Dbxref=Genbank:NP_628777.1,GeneID:1100055;Name=NP_628777.1;Note=SCD39.15c%2C integrase%2C len: 455 aa%3B identical to previously sequenced TR:Q53966 (EMBL:X71358) Streptomyces coelicolor Int%2C plasmid SLP1 DNA for xis and int genes%2C 455 aa. Contains Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family and TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCD39.15c;product=integrase;protein_id=NP_628777.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5038800	5039429	.	-	.	ID=id5783;Dbxref=GeneID:1100055;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 3.00%2C E-value 0.00014;gbkey=misc_feature;gene=SCD39.15c
NC_003888.3	RefSeq	sequence_feature	5039238	5039240	.	-	.	ID=id5784;Dbxref=GeneID:1100055;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD39.15c
NC_003888.3	RefSeq	gene	5040186	5040371	.	-	.	ID=gene4664;Dbxref=GeneID:1100056;Name=SCD39.16c;gbkey=Gene;gene=SCD39.16c;gene_biotype=protein_coding;gene_synonym=SCD39.16c,xis;locus_tag=SCO4616
NC_003888.3	RefSeq	CDS	5040186	5040371	.	-	0	ID=cds4568;Parent=gene4664;Dbxref=Genbank:NP_628778.1,GeneID:1100056;Name=NP_628778.1;Note=SCD39.16c%2C xis%2C excisionase%2C len: 61 aa%3B identical to previously sequenced TR:Q53965 (EMBL:X71358) Streptomyces coelicolor Xis%2C plasmid SLP1 DNA for xis and int genes%2C 61 aa;gbkey=CDS;gene=SCD39.16c;product=excisionase;protein_id=NP_628778.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5040380	5040384	.	-	.	ID=id5785;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	5040431	5040565	.	-	.	ID=id5786;Note=possible stem loop. Score 63: 29/29 (100%25) matches%2C 2 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5040809	5042281	.	-	.	ID=gene4665;Dbxref=GeneID:1100057;Name=SCD39.17c;gbkey=Gene;gene=SCD39.17c;gene_biotype=protein_coding;gene_synonym=SCD39.17c;locus_tag=SCO4617
NC_003888.3	RefSeq	CDS	5040809	5042281	.	-	0	ID=cds4569;Parent=gene4665;Dbxref=Genbank:NP_628779.1,GeneID:1100057;Name=NP_628779.1;Note=SCD39.17c%2C possible ATP-binding protein%2C len: 490 aa. Contains match to Prosite entry and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD39.17c;product=ATP-binding protein;protein_id=NP_628779.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5041673	5041696	.	-	.	ID=id5787;Dbxref=GeneID:1100057;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD39.17c
NC_003888.3	RefSeq	gene	5042283	5043134	.	-	.	ID=gene4666;Dbxref=GeneID:1100058;Name=SCD39.18c;gbkey=Gene;gene=SCD39.18c;gene_biotype=protein_coding;gene_synonym=SCD39.18c;locus_tag=SCO4618
NC_003888.3	RefSeq	CDS	5042283	5043134	.	-	0	ID=cds4570;Parent=gene4666;Dbxref=Genbank:NP_628780.1,GeneID:1100058;Name=NP_628780.1;Note=SCD39.18c%2C unknown%2C len: 283 aa;gbkey=CDS;gene=SCD39.18c;product=hypothetical protein;protein_id=NP_628780.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5043145	5043148	.	-	.	ID=id5788;gbkey=RBS
NC_003888.3	RefSeq	gene	5043224	5043691	.	-	.	ID=gene4667;Dbxref=GeneID:1100059;Name=SCD39.19c;gbkey=Gene;gene=SCD39.19c;gene_biotype=protein_coding;gene_synonym=SCD39.19c;locus_tag=SCO4619
NC_003888.3	RefSeq	CDS	5043224	5043691	.	-	0	ID=cds4571;Parent=gene4667;Dbxref=Genbank:NP_628781.1,GeneID:1100059;Name=NP_628781.1;Note=SCD39.19c%2C possible integral membrane protein%2C len: 19c aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD39.19c;product=hypothetical protein;protein_id=NP_628781.1;transl_table=11
NC_003888.3	RefSeq	gene	5043865	5045910	.	-	.	ID=gene4668;Dbxref=GeneID:1100060;Name=SCD39.20c;gbkey=Gene;gene=SCD39.20c;gene_biotype=protein_coding;gene_synonym=SCD39.20c,traB1;locus_tag=SCO4620
NC_003888.3	RefSeq	CDS	5043865	5045910	.	-	0	ID=cds4572;Parent=gene4668;Dbxref=Genbank:NP_628782.1,GeneID:1100060;Name=NP_628782.1;Note=SCD39.20c%2C traB1%2C possible sporulation-related protein%2C len: 681 aa%3B highly similar to TR:Q54679 (EMBL:U23762) Streptomyces phaeochromogenes essential for intermycelial plasmid transfer and pock formation%2C TraB%2C 678 aa%3B fasta scores: opt: 1845 z-score: 2002.9 E(): 0%3B 51.0%25 identity in 679 aa overlap and middle domain similar to middle domain of SW:SP3E_BACSU (EMBL:M17445) Bacillus subtilis stage III sporulation protein E%2C SpoIIIE%2C 787 aa%3B fasta scores: opt: 208 z-score: 224.4 E(): 4.9e-05%3B 26.7%25 identity in 344 aa overlap. Contains Pfam match to entry PF01580 FtsK_SpoIIIE%2C FtsK/SpoIIIE family. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD39.20c;product=sporulation-like protein;protein_id=NP_628782.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5044603	5045208	.	-	.	ID=id5789;Dbxref=GeneID:1100060;Note=Pfam match to entry PF01580 FtsK_SpoIIIE%2C FtsK/SpoIIIE family%2C score 5.30%2C E-value 1.9e-05;gbkey=misc_feature;gene=SCD39.20c
NC_003888.3	RefSeq	gene	5045925	5046464	.	-	.	ID=gene4669;Dbxref=GeneID:1100061;Name=SCD39.21c;gbkey=Gene;gene=SCD39.21c;gene_biotype=protein_coding;gene_synonym=SCD39.21c,traA1;locus_tag=SCO4621
NC_003888.3	RefSeq	CDS	5045925	5046464	.	-	0	ID=cds4573;Parent=gene4669;Dbxref=Genbank:NP_628783.1,GeneID:1100061;Name=NP_628783.1;Note=SCD39.21c%2C traA1%2C possible sporulation-related protein%2C len: 179 aa%3B highly similar to TR:Q54678 (EMBL:U23762) Streptomyces phaeochromogenes involved in intermycelial plasmid transfer TraA%2C 184 aa%3B fasta scores: opt: 472 z-score: 523.1 E(): 1.1e-21%3B 50.0%25 identity in 172 aa overlap;gbkey=CDS;gene=SCD39.21c;product=sporulation-like protein;protein_id=NP_628783.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5046475	5046479	.	-	.	ID=id5790;gbkey=RBS
NC_003888.3	RefSeq	gene	5046484	5046984	.	-	.	ID=gene4670;Dbxref=GeneID:1100062;Name=SCD39.22c;gbkey=Gene;gene=SCD39.22c;gene_biotype=protein_coding;gene_synonym=SCD39.22c;locus_tag=SCO4622
NC_003888.3	RefSeq	CDS	5046484	5046984	.	-	0	ID=cds4574;Parent=gene4670;Dbxref=Genbank:NP_628784.1,GeneID:1100062;Name=NP_628784.1;Note=SCD39.22c%2C possible integral membrane protein%2C len: 166 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD39.22c;product=hypothetical protein;protein_id=NP_628784.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5046992	5046996	.	-	.	ID=id5791;gbkey=RBS
NC_003888.3	RefSeq	gene	5047012	5047170	.	+	.	ID=gene4671;Dbxref=GeneID:1100063;Name=SCD39.23;gbkey=Gene;gene=SCD39.23;gene_biotype=protein_coding;gene_synonym=SCD39.23;locus_tag=SCO4623
NC_003888.3	RefSeq	CDS	5047012	5047170	.	+	0	ID=cds4575;Parent=gene4671;Dbxref=Genbank:NP_628785.1,GeneID:1100063;Name=NP_628785.1;Note=SCD39.23%2C unknown%2C len: 52 aa;gbkey=CDS;gene=SCD39.23;product=hypothetical protein;protein_id=NP_628785.1;transl_table=11
NC_003888.3	RefSeq	gene	5047328	5047663	.	-	.	ID=gene4672;Dbxref=GeneID:1100064;Name=SCD39.24c;gbkey=Gene;gene=SCD39.24c;gene_biotype=protein_coding;gene_synonym=SCD39.24c;locus_tag=SCO4624
NC_003888.3	RefSeq	CDS	5047328	5047663	.	-	0	ID=cds4576;Parent=gene4672;Dbxref=Genbank:NP_628786.1,GeneID:1100064;Name=NP_628786.1;Note=SCD39.24c%2C unknown%2C len: 111 aa;gbkey=CDS;gene=SCD39.24c;product=hypothetical protein;protein_id=NP_628786.1;transl_table=11
NC_003888.3	RefSeq	gene	5047663	5048670	.	-	.	ID=gene4673;Dbxref=GeneID:1100065;Name=SCD39.25c;gbkey=Gene;gene=SCD39.25c;gene_biotype=protein_coding;gene_synonym=SCD39.25c;locus_tag=SCO4625
NC_003888.3	RefSeq	CDS	5047663	5048670	.	-	0	ID=cds4577;Parent=gene4673;Dbxref=Genbank:NP_628787.1,GeneID:1100065;Name=NP_628787.1;Note=SCD39.25c%2C hypothetical protein%2C len: 335 aa%3B similar to TR:Q54674 (EMBL:U23762) Streptomyces phaeochromogenes involved in intramycelial plasmid spread protein SpdB2%2C 371 aa%3B fasta scores: opt: 799 z-score: 782.1 E(): 0%3B 45.1%25 identity in 368 aa overlap. Contains colied-coil region at aprox . 184..262 aa (coinciding with a high hidropihilicity region in the protein) and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD39.25c;product=hypothetical protein;protein_id=NP_628787.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5047789	5048307	.	-	.	ID=id5792;Dbxref=GeneID:1100065;Note=region rich in alanine%2C glutamic acid and arginine amino acid residues;gbkey=misc_feature;gene=SCD39.25c
NC_003888.3	RefSeq	gene	5048667	5049200	.	-	.	ID=gene4674;Dbxref=GeneID:1100066;Name=SCD39.26c;gbkey=Gene;gene=SCD39.26c;gene_biotype=protein_coding;gene_synonym=SCD39.26c;locus_tag=SCO4626
NC_003888.3	RefSeq	CDS	5048667	5049200	.	-	0	ID=cds4578;Parent=gene4674;Dbxref=Genbank:NP_628788.1,GeneID:1100066;Name=NP_628788.1;Note=SCD39.26c%2C unknown%2C len: 177 aa;gbkey=CDS;gene=SCD39.26c;product=hypothetical protein;protein_id=NP_628788.1;transl_table=11
NC_003888.3	RefSeq	gene	5049197	5049466	.	-	.	ID=gene4675;Dbxref=GeneID:1100067;Name=SCD39.27c;gbkey=Gene;gene=SCD39.27c;gene_biotype=protein_coding;gene_synonym=SCD39.27c;locus_tag=SCO4627
NC_003888.3	RefSeq	CDS	5049197	5049466	.	-	0	ID=cds4579;Parent=gene4675;Dbxref=Genbank:NP_628789.1,GeneID:1100067;Name=NP_628789.1;Note=SCD39.27c%2C unknown%2C len: 89 aa;gbkey=CDS;gene=SCD39.27c;product=hypothetical protein;protein_id=NP_628789.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5049362	5051689	.	+	.	ID=id5793;Note=previously sequenced DNA fragment. EMBL:X15866 S. coelicolor DNA imp region containing 3 open reading frames;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5049882	5049886	.	+	.	ID=id5794;gbkey=RBS
NC_003888.3	RefSeq	gene	5049893	5050702	.	+	.	ID=gene4676;Dbxref=GeneID:1100068;Name=SCD39.28;gbkey=Gene;gene=SCD39.28;gene_biotype=protein_coding;gene_synonym=SCD39.28;locus_tag=SCO4628
NC_003888.3	RefSeq	CDS	5049893	5050702	.	+	0	ID=cds4580;Parent=gene4676;Dbxref=Genbank:NP_628790.1,GeneID:1100068;Name=NP_628790.1;Note=SCD39.28%2C regulator%2C len: 269 aa%3B identical to C-terminal region of previously sequenced SW:YIMA_STRCO (EMBL:X15866) Streptomyces coelicolor hypothetical 22.9 kDa protein in Imp region (ORFA)%2C 208 aa and similar to TR:Q9X8D2 (EMBL:AL049573) Streptomyces coelicolor KorSA regulatory protein%2C 259 aa%3B fasta scores: opt: 389 z-score: 454.8 E(): 7.3e-18%3B 31.2%25 identity in 253 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCD39.28;product=regulator;protein_id=NP_628790.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5049923	5050102	.	+	.	ID=id5795;Dbxref=GeneID:1100068;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 38.60%2C E-value 2.3e-10;gbkey=misc_feature;gene=SCD39.28
NC_003888.3	RefSeq	ribosome_entry_site	5050684	5050688	.	+	.	ID=id5796;Dbxref=GeneID:1100068;gbkey=RBS;gene=SCD39.28
NC_003888.3	RefSeq	gene	5050699	5051364	.	+	.	ID=gene4677;Dbxref=GeneID:1100069;Name=SCD39.29;gbkey=Gene;gene=SCD39.29;gene_biotype=protein_coding;gene_synonym=SCD39.29;locus_tag=SCO4629
NC_003888.3	RefSeq	CDS	5050699	5051364	.	+	0	ID=cds4581;Parent=gene4677;Dbxref=Genbank:NP_628791.1,GeneID:1100069;Name=NP_628791.1;Note=SCD39.29%2C hypothetical protein%2C len: 221 aa%3B identical to previously sequenced SW:YIMC_STRCO (EMBL:X15866) Streptomyces coelicolor hypothetical 22.7 kDa protein in Imp region (ORFC)%2C 203 aa. Contains possible alternative translational starting point downstream;gbkey=CDS;gene=SCD39.29;product=hypothetical protein;protein_id=NP_628791.1;transl_table=11
NC_003888.3	RefSeq	gene	5051465	5052724	.	-	.	ID=gene4678;Dbxref=GeneID:1100070;Name=SCD39.30c;gbkey=Gene;gene=SCD39.30c;gene_biotype=protein_coding;gene_synonym=SCD39.30c,SCD82.01c;locus_tag=SCO4630
NC_003888.3	RefSeq	CDS	5051465	5052724	.	-	0	ID=cds4582;Parent=gene4678;Dbxref=Genbank:NP_733643.1,GeneID:1100070;Name=NP_733643.1;Note=SCD82.01c%2C unknown (fragment)%2C len: >275 aa~SCD39.30c%2C hypothetical protein (fragment)%2C len: >179 aa. Low G+C content (53.78%25);gbkey=CDS;gene=SCD39.30c;product=hypothetical protein;protein_id=NP_733643.1;transl_table=11
NC_003888.3	RefSeq	gene	5052984	5054666	.	-	.	ID=gene4679;Dbxref=GeneID:1100071;Name=SCD82.02c;gbkey=Gene;gene=SCD82.02c;gene_biotype=protein_coding;gene_synonym=SCD82.02c;locus_tag=SCO4631
NC_003888.3	RefSeq	CDS	5052984	5054666	.	-	0	ID=cds4583;Parent=gene4679;Dbxref=Genbank:NP_628792.1,GeneID:1100071;Name=NP_628792.1;Note=SCD82.02c%2C hypothetical protein%2C len: 560 aa%3B similar to C-terminal region of SW:MCRA_ECOLI (EMBL:M76667) Escherichia coli 5-methylcytosine-specific restriction enzyme A (EC 3.1.21.-) McrA%2C 277 aa%3B fasta scores: opt: 214 z-score: 250.8 E(): 1.5e-06%3B 32.8%25 identity in 131 aa overlap;gbkey=CDS;gene=SCD82.02c;product=hypothetical protein;protein_id=NP_628792.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5055399	5055741	.	-	.	ID=id5797;Note=identical to SCXISINT X71358 S.coelicolor plasmid SPL1 DNA for xis and int genes;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5055611	5055665	.	+	.	ID=id5798;Note=Right hand portion of tRNA disrupted by SLP1 insertion;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5055612	5055771	.	+	.	ID=gene4680;Dbxref=GeneID:1100072;Name=attB;gbkey=Gene;gene=attB;gene_biotype=other;locus_tag=SCOp01
NC_003888.3	RefSeq	sequence_feature	5055612	5055771	.	+	.	ID=id5799;Dbxref=GeneID:1100072;Note=attB%2C chromosomal SLP1 plasmid attachment site. Contains left inverted repeat (ACGACCGAAAGGGTCTGTGACCAGC)%2C the SLP1 insertion target site%2C and right inverted repeat(TGCTGATCACAGACCCTTTCGTCGT) EMBL:SLSLP1I;gbkey=misc_feature;gene=attB
NC_003888.3	RefSeq	repeat_region	5055668	5055692	.	+	.	ID=id5800;Dbxref=GeneID:1100072;Note=Left inverted repeat ACGACCGAAAGGGTCTGTGACCAGC;gbkey=repeat_region;gene=attB
NC_003888.3	RefSeq	sequence_feature	5055694	5055697	.	+	.	ID=id5801;Dbxref=GeneID:1100072;Note=SLP1 insertion target site. EMBL:SLSLP1I;gbkey=misc_feature;gene=attB
NC_003888.3	RefSeq	repeat_region	5055698	5055722	.	+	.	ID=id5802;Dbxref=GeneID:1100072;Note=Right inverted repeat TGCTGATCACAGACCCTTTCGTCGT;gbkey=repeat_region;gene=attB
NC_003888.3	RefSeq	gene	5055828	5058728	.	+	.	ID=gene4681;Dbxref=GeneID:1100073;Name=SCD82.03;gbkey=Gene;gene=SCD82.03;gene_biotype=protein_coding;gene_synonym=SCD82.03;locus_tag=SCO4632
NC_003888.3	RefSeq	CDS	5055828	5058728	.	+	0	ID=cds4584;Parent=gene4681;Dbxref=Genbank:NP_628793.1,GeneID:1100073;Name=NP_628793.1;Note=SCD82.03%2C possible ATP/GTP binding protein%2C len: 966 aa%3B similar to TR:O86768 (EMBL:AL031035) Streptomyces coelicolor ATP/GTP binding protein SC6A9.38%2C 886 aa%3B fasta scores: opt: 3484 z-score: 3600.2 E(): 0%3B 59.7%25 identity in 886 aa overlap and to C-terminal part of SW:KNLC_CAEEL (EMBL:Z29644) Caenorhabditis elegans kinesin light chain Kcl-2%2C 540 aa%3B fasta scores: opt: 346 z-score: 360.1 E(): 1.2e-12%3B 25.9%25 identity in 340 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD82.03;product=ATP/GTP binding protein;protein_id=NP_628793.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5056449	5056472	.	+	.	ID=id5803;Dbxref=GeneID:1100073;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD82.03
NC_003888.3	RefSeq	repeat_region	5057772	5058504	.	-	.	ID=id5804;Note=degenerated repeat 7x[LGE-VEARRVLG(E/Q)DHPHTL-SA];gbkey=repeat_region
NC_003888.3	RefSeq	gene	5059025	5059681	.	-	.	ID=gene4682;Dbxref=GeneID:1100074;Name=SCD82.04c;gbkey=Gene;gene=SCD82.04c;gene_biotype=protein_coding;gene_synonym=SCD82.04c;locus_tag=SCO4633
NC_003888.3	RefSeq	CDS	5059025	5059681	.	-	0	ID=cds4585;Parent=gene4682;Dbxref=Genbank:NP_628794.1,GeneID:1100074;Name=NP_628794.1;Note=SCD82.04c%2C hypothetical protein%2C len: 218 aa%3B similar to various hypothetical proteins%2C e.g. TR:O07609 (EMBL:Y14083) Bacillus subtilis hypothetical 22.8 kD protein YhfK%2C 214 aa%3B fsta scores: opt: 425 z-score: 473.2 E(): 6.1e-19%3B 36.6%25 identity in 216 aa overlap;gbkey=CDS;gene=SCD82.04c;product=hypothetical protein;protein_id=NP_628794.1;transl_table=11
NC_003888.3	RefSeq	gene	5059786	5061090	.	-	.	ID=gene4683;Dbxref=GeneID:1100075;Name=SCD82.05c;gbkey=Gene;gene=SCD82.05c;gene_biotype=protein_coding;gene_synonym=SCD82.05c;locus_tag=SCO4634
NC_003888.3	RefSeq	CDS	5059786	5061090	.	-	0	ID=cds4586;Parent=gene4683;Dbxref=Genbank:NP_628795.1,GeneID:1100075;Name=NP_628795.1;Note=SCD82.05c%2C possible hydrolase%2C len: 434 aa%3B similar to SW:ATZC_PSESD (EMBL:AF017572) Pseudomonas sp. N-isopropylammelide isopropyl amidohydrolase (EC 3.5.1.-) AtzC%2C 403 aa%3B fasta scores: opt: 292 z-score: 291.5 E(): 8.2e-09%3B 23.5%25 identity in 383 aa overlap;gbkey=CDS;gene=SCD82.05c;product=hydrolase;protein_id=NP_628795.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5061095	5061100	.	-	.	ID=id5805;gbkey=RBS
NC_003888.3	RefSeq	gene	5061316	5061388	.	+	.	ID=gene4684;Dbxref=GeneID:3240052;Name=SCOt49;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt49
NC_003888.3	RefSeq	tRNA	5061316	5061388	.	+	.	ID=rna66;Parent=gene4684;Dbxref=GeneID:3240052;Note=tRNA Thr anticodon GGT%2C Cove score 79.07;gbkey=tRNA;product=tRNA-Thr
NC_003888.3	RefSeq	exon	5061316	5061388	.	+	.	ID=id5806;Parent=rna66;Dbxref=GeneID:3240052;Note=tRNA Thr anticodon GGT%2C Cove score 79.07;gbkey=tRNA;product=tRNA-Thr
NC_003888.3	RefSeq	gene	5061435	5061507	.	+	.	ID=gene4685;Dbxref=GeneID:3240053;Name=SCOt50;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt50
NC_003888.3	RefSeq	tRNA	5061435	5061507	.	+	.	ID=rna67;Parent=gene4685;Dbxref=GeneID:3240053;Note=tRNA Met anticodon CAT%2C Cove score 77.46;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	exon	5061435	5061507	.	+	.	ID=id5807;Parent=rna67;Dbxref=GeneID:3240053;Note=tRNA Met anticodon CAT%2C Cove score 77.46;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	ribosome_entry_site	5061586	5061589	.	+	.	ID=id5808;gbkey=RBS
NC_003888.3	RefSeq	gene	5061599	5061763	.	+	.	ID=gene4686;Dbxref=GeneID:1100076;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;gene_synonym=rpmG3,SCD82.06;locus_tag=SCO4635
NC_003888.3	RefSeq	CDS	5061599	5061763	.	+	0	ID=cds4587;Parent=gene4686;Dbxref=Genbank:NP_628796.1,GeneID:1100076;Name=NP_628796.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group have the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=NP_628796.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5061617	5061760	.	+	.	ID=id5809;Dbxref=GeneID:1100076;Note=Pfam match to entry PF00471 Ribosomal_L33%2C Ribosomal protein L33%2C score 81.30%2C E-value 1.9e-20;gbkey=misc_feature;gene=rpmG
NC_003888.3	RefSeq	ribosome_entry_site	5061843	5061848	.	+	.	ID=id5810;gbkey=RBS
NC_003888.3	RefSeq	gene	5061859	5062311	.	+	.	ID=gene4687;Dbxref=GeneID:1100077;Name=SCD82.07;gbkey=Gene;gene=SCD82.07;gene_biotype=protein_coding;gene_synonym=SCD82.07;locus_tag=SCO4636
NC_003888.3	RefSeq	CDS	5061859	5062311	.	+	0	ID=cds4588;Parent=gene4687;Dbxref=Genbank:NP_628797.1,GeneID:1100077;Name=NP_628797.1;Note=SCD82.07%2C hypothetical protein%2C len: 150 aa%3B similar to SW:YV31_MYCTU (EMBL:Z77162) Mycobacterium tuberculosis hypothetical 18.4 kD protein CY20G9.31c%2C 166 aa%3B fasta scores: opt: 304 z-score: 373.0 E(): 2.4e-13%3B 35.0%25 identity in 143 aa overlap. Contains TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCD82.07;product=hypothetical protein;protein_id=NP_628797.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5061877	5061879	.	+	.	ID=id5811;Dbxref=GeneID:1100077;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD82.07
NC_003888.3	RefSeq	gene	5062317	5062745	.	+	.	ID=gene4688;Dbxref=GeneID:1100078;Name=SCD82.08;gbkey=Gene;gene=SCD82.08;gene_biotype=protein_coding;gene_synonym=SCD82.08;locus_tag=SCO4637
NC_003888.3	RefSeq	CDS	5062317	5062745	.	+	0	ID=cds4589;Parent=gene4688;Dbxref=Genbank:NP_628798.1,GeneID:1100078;Name=NP_628798.1;Note=SCD82.08%2C hypothetical protein%2C len: 142 aa%3B similar to TR:O27971 (EMBL:AE000944) Archaeoglobus fulgidus MaoC protein AF2313%2C 151 aa%3B fasta scores: opt: 191 z-score: 246.3 E(): 2.7e-06%3B 34.0%25 identity in 106 aa overlap and to TR:Q9CBJ7 (EMBL:AL583923) Mycobacterium leprae hypothetical protein ML1909%2C 142 aa%3B fasta scores: opt: 456 Z-score: 548.6 E(): 6.3e-23%3B 51.471%25 identity in 136 aa overlap. Contains Pfam match to entry PF01575 MaoC_like%2C MaoC like domain;gbkey=CDS;gene=SCD82.08;product=hypothetical protein;protein_id=NP_628798.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5062341	5062700	.	+	.	ID=id5812;Dbxref=GeneID:1100078;Note=Pfam match to entry PF01575 MaoC_like%2C MaoC like domain%2C score 94.10%2C E-value 2.8e-24;gbkey=misc_feature;gene=SCD82.08
NC_003888.3	RefSeq	gene	5062845	5063669	.	-	.	ID=gene4689;Dbxref=GeneID:1100079;Name=SCD82.09c;gbkey=Gene;gene=SCD82.09c;gene_biotype=protein_coding;gene_synonym=SCD82.09c;locus_tag=SCO4638
NC_003888.3	RefSeq	CDS	5062845	5063669	.	-	0	ID=cds4590;Parent=gene4689;Dbxref=Genbank:NP_628799.1,GeneID:1100079;Name=NP_628799.1;Note=SCD82.09c%2C hypothetical protein%2C len: 274 aa%3B similar to TR:Q9XBC9 (EMBL:AL078635) Streptomyces coelicolor rRNA methylase CZA382.22c%2C 259 aa%3B fasta scores: opt: 259 z-score: 291.0 E(): 8.7e-09%3B 30.8%25 identity in 221 aa overlap;gbkey=CDS;gene=SCD82.09c;product=hypothetical protein;protein_id=NP_628799.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5063718	5063723	.	+	.	ID=id5813;gbkey=RBS
NC_003888.3	RefSeq	gene	5063734	5064339	.	+	.	ID=gene4690;Dbxref=GeneID:1100080;Name=SCD82.10;gbkey=Gene;gene=SCD82.10;gene_biotype=protein_coding;gene_synonym=SCD82.10;locus_tag=SCO4639
NC_003888.3	RefSeq	CDS	5063734	5064339	.	+	0	ID=cds4591;Parent=gene4690;Dbxref=Genbank:NP_628800.1,GeneID:1100080;Name=NP_628800.1;Note=SCD82.10%2C hypothetical protein%2C len: 201 aa%3B similar to TR:CAB52009 (EMBL:AL109663) Streptomyces coelicolor transcriptional regulator SC4A10.33%2C 209 aa%3B fasta scores: opt: 138 z-score: 174.2 E(): 0.028%3B 30.3%25 identity in 165 aa overlap;gbkey=CDS;gene=SCD82.10;product=hypothetical protein;protein_id=NP_628800.1;transl_table=11
NC_003888.3	RefSeq	gene	5064405	5064998	.	+	.	ID=gene4691;Dbxref=GeneID:1100081;Name=SCD82.11;gbkey=Gene;gene=SCD82.11;gene_biotype=protein_coding;gene_synonym=SCD82.11;locus_tag=SCO4640
NC_003888.3	RefSeq	CDS	5064405	5064998	.	+	0	ID=cds4592;Parent=gene4691;Dbxref=Genbank:NP_628801.1,GeneID:1100081;Name=NP_628801.1;Note=SCD82.11%2C possible tetR-family transcriptional regulator%2C len: 197 aa%3B similar to TR:AAF11696 (EMBL:AE002049) Deinococcus radiodurans transcriptional regulator%2C tetR family DR2148%2C 204 aa%3B fasta scores: opt: 175 z-score: 223.6 E(): 4.9e-05%3B 26.2%25 identity in 172 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SCD82.11;product=TetR family transcriptional regulator;protein_id=NP_628801.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5064441	5064581	.	+	.	ID=id5814;Dbxref=GeneID:1100081;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.20%2C E-value 8.5e-11;gbkey=misc_feature;gene=SCD82.11
NC_003888.3	RefSeq	ribosome_entry_site	5065108	5065113	.	+	.	ID=id5815;gbkey=RBS
NC_003888.3	RefSeq	gene	5065114	5066586	.	+	.	ID=gene4692;Dbxref=GeneID:1100082;Name=SCD82.12;gbkey=Gene;gene=SCD82.12;gene_biotype=protein_coding;gene_synonym=SCD82.12;locus_tag=SCO4641
NC_003888.3	RefSeq	CDS	5065114	5066586	.	+	0	ID=cds4593;Parent=gene4692;Dbxref=Genbank:NP_628802.1,GeneID:1100082;Name=NP_628802.1;Note=SCD82.12%2C possible transmembrane efflux protein%2C len: 490 aa%3B similar to SW:TCMA_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA%2C 538 aa%3B fasta scores: opt: 952 z-score: 977.6 E(): 0%3B 33.5%25 identity in 466 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD82.12;product=transmembrane efflux protein;protein_id=NP_628802.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5065165	5066484	.	+	.	ID=id5816;Dbxref=GeneID:1100082;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -98.70%2C E-value 0.0024;gbkey=misc_feature;gene=SCD82.12
NC_003888.3	RefSeq	ribosome_entry_site	5066612	5066617	.	+	.	ID=id5817;gbkey=RBS
NC_003888.3	RefSeq	gene	5066624	5067004	.	+	.	ID=gene4693;Dbxref=GeneID:1100083;Name=SCD82.13;gbkey=Gene;gene=SCD82.13;gene_biotype=protein_coding;gene_synonym=SCD82.13;locus_tag=SCO4642
NC_003888.3	RefSeq	CDS	5066624	5067004	.	+	0	ID=cds4594;Parent=gene4693;Dbxref=Genbank:NP_628803.1,GeneID:1100083;Name=NP_628803.1;Note=SCD82.13%2C unknown%2C len: 126 aa;gbkey=CDS;gene=SCD82.13;product=hypothetical protein;protein_id=NP_628803.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5066792	5066794	.	+	.	ID=id5818;Dbxref=GeneID:1100083;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD82.13
NC_003888.3	RefSeq	gene	5067001	5068152	.	+	.	ID=gene4694;Dbxref=GeneID:1100084;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;gene_synonym=SCD82.14;locus_tag=SCO4643
NC_003888.3	RefSeq	CDS	5067001	5068152	.	+	0	ID=cds4595;Parent=gene4694;Dbxref=Genbank:NP_628804.1,GeneID:1100084;Name=NP_628804.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=NP_628804.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	5068384	5068496	.	-	.	ID=id5819;Note=16487 GGGGGCGGGTGTCGGGGGGTGTCCGCCC 16512-16574 GGACGGACACCCCCCGGCGCGGCCCC 16599. 22/26 ( 84%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5068592	5069623	.	-	.	ID=gene4695;Dbxref=GeneID:1100085;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;gene_synonym=add,SCD82.15c;locus_tag=SCO4644
NC_003888.3	RefSeq	CDS	5068592	5069623	.	-	0	ID=cds4596;Parent=gene4695;Dbxref=Genbank:NP_628805.1,GeneID:1100085;Name=NP_628805.1;Note=catalyzes the formation of inosine from adenosine;gbkey=CDS;gene=add;product=adenosine deaminase;protein_id=NP_628805.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5068616	5069431	.	-	.	ID=id5820;Dbxref=GeneID:1100085;Note=Pfam match to entry PF00962 A_deaminase%2C Adenosine/AMP deaminase%2C score 356.70%2C E-value 2.4e-103;gbkey=misc_feature;gene=add
NC_003888.3	RefSeq	sequence_feature	5068763	5068783	.	-	.	ID=id5821;Dbxref=GeneID:1100085;Note=PS00485 Adenosine and AMP deaminase signature;gbkey=misc_feature;gene=add
NC_003888.3	RefSeq	gene	5069749	5070975	.	-	.	ID=gene4696;Dbxref=GeneID:1100086;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;gene_synonym=aspC,SCD82.16c;locus_tag=SCO4645
NC_003888.3	RefSeq	CDS	5069749	5070975	.	-	0	ID=cds4597;Parent=gene4696;Dbxref=Genbank:NP_628806.1,GeneID:1100086;Name=NP_628806.1;Note=catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate;gbkey=CDS;gene=aspC;product=aspartate aminotransferase;protein_id=NP_628806.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5069761	5070951	.	-	.	ID=id5822;Dbxref=GeneID:1100086;Note=Pfam match to entry PF00155 aminotran_1%2C Aminotransferases class-I%2C score 334.30%2C E-value 1.3e-96;gbkey=misc_feature;gene=aspC
NC_003888.3	RefSeq	sequence_feature	5070205	5070246	.	-	.	ID=id5823;Dbxref=GeneID:1100086;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=aspC
NC_003888.3	RefSeq	gene	5071215	5071290	.	+	.	ID=gene4697;Dbxref=GeneID:3240054;Name=SCOt51;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt51
NC_003888.3	RefSeq	tRNA	5071215	5071290	.	+	.	ID=rna68;Parent=gene4697;Dbxref=GeneID:3240054;Note=tRNA Trp anticodon CCA %2C Cove score 79.13;gbkey=tRNA;product=tRNA-Trp
NC_003888.3	RefSeq	exon	5071215	5071290	.	+	.	ID=id5824;Parent=rna68;Dbxref=GeneID:3240054;Note=tRNA Trp anticodon CCA %2C Cove score 79.13;gbkey=tRNA;product=tRNA-Trp
NC_003888.3	RefSeq	ribosome_entry_site	5071388	5071392	.	+	.	ID=id5825;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	5071396	5073285	.	+	.	ID=id5826;Note=previously sequenced fragment (EMBL:D32254);gbkey=misc_feature
NC_003888.3	RefSeq	gene	5071396	5071680	.	+	.	ID=gene4698;Dbxref=GeneID:1100087;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;gene_synonym=SCD82.17;locus_tag=SCO4646
NC_003888.3	RefSeq	CDS	5071396	5071680	.	+	0	ID=cds4598;Parent=gene4698;Dbxref=Genbank:NP_628807.1,GeneID:1100087;Name=NP_628807.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a  protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=NP_628807.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5071504	5071674	.	+	.	ID=id5827;Dbxref=GeneID:1100087;Note=Pfam match to entry PF00584 SecE%2C SecE/Sec61-gamma subunits of protein translocation complex%2C score 104.50%2C E-value 2e-27;gbkey=misc_feature;gene=secE
NC_003888.3	RefSeq	sequence_feature	5071516	5071602	.	+	.	ID=id5828;Dbxref=GeneID:1100087;Note=PS01067 Protein secE/sec61-gamma signature;gbkey=misc_feature;gene=secE
NC_003888.3	RefSeq	gene	5071761	5072663	.	+	.	ID=gene4699;Dbxref=GeneID:1100088;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;gene_synonym=nusG,SCD82.18;locus_tag=SCO4647
NC_003888.3	RefSeq	CDS	5071761	5072663	.	+	0	ID=cds4599;Parent=gene4699;Dbxref=Genbank:NP_628808.1,GeneID:1100088;Name=NP_628808.1;Note=SCD82.18%2C nusG%2C transcription antitermination protein%2C len: 300aa%3B identical to previously sequenced SW:NUSG_STRCO (EMBL:D17465) Streptomyces coelicolor transcription antitermination protein NusG. Contains match to Prosite entry PS01014 Transcription termination factor nusG signature. Contains also possible coiled-coil region at aprox. residues 56..75;gbkey=CDS;gene=nusG;product=transcription antitermination protein;protein_id=NP_628808.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5072607	5072636	.	+	.	ID=id5829;Dbxref=GeneID:1100088;Note=PS01014 Transcription termination factor nusG signature;gbkey=misc_feature;gene=nusG
NC_003888.3	RefSeq	ribosome_entry_site	5072843	5072848	.	+	.	ID=id5830;gbkey=RBS
NC_003888.3	RefSeq	gene	5072851	5073285	.	+	.	ID=gene4700;Dbxref=GeneID:1100089;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;gene_synonym=SCD82.19;locus_tag=SCO4648
NC_003888.3	RefSeq	CDS	5072851	5073285	.	+	0	ID=cds4600;Parent=gene4700;Dbxref=Genbank:NP_628809.1,GeneID:1100089;Name=NP_628809.1;Note=binds directly to 23S ribosomal RNA;gbkey=CDS;gene=rplK;product=50S ribosomal protein L11;protein_id=NP_628809.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5072884	5073279	.	+	.	ID=id5831;Dbxref=GeneID:1100089;Note=Pfam match to entry PF00298 Ribosomal_L11%2C Ribosomal protein L11%2C score 302.00%2C E-value 7.3e-87;gbkey=misc_feature;gene=rplK
NC_003888.3	RefSeq	sequence_feature	5073235	5073282	.	+	.	ID=id5832;Dbxref=GeneID:1100089;Note=PS00359 Ribosomal protein L11 signature;gbkey=misc_feature;gene=rplK
NC_003888.3	RefSeq	ribosome_entry_site	5073359	5073363	.	+	.	ID=id5833;gbkey=RBS
NC_003888.3	RefSeq	gene	5073369	5074094	.	+	.	ID=gene4701;Dbxref=GeneID:1100090;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;gene_synonym=rlpA,SCD82.20;locus_tag=SCO4649
NC_003888.3	RefSeq	CDS	5073369	5074094	.	+	0	ID=cds4601;Parent=gene4701;Dbxref=Genbank:NP_628810.1,GeneID:1100090;Name=NP_628810.1;Note=in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA;gbkey=CDS;gene=rplA;product=50S ribosomal protein L1;protein_id=NP_628810.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5073411	5074031	.	+	.	ID=id5834;Dbxref=GeneID:1100090;Note=Pfam match to entry PF00687 Ribosomal_L1%2C L1P family of ribosomal proteins%2C score 455.50%2C E-value 4.4e-133;gbkey=misc_feature;gene=rplA
NC_003888.3	RefSeq	sequence_feature	5073729	5073785	.	+	.	ID=id5835;Dbxref=GeneID:1100090;Note=PS01199 Ribosomal protein L1 signature;gbkey=misc_feature;gene=rplA
NC_003888.3	RefSeq	gene	5074267	5075124	.	+	.	ID=gene4702;Dbxref=GeneID:1100091;Name=SCD82.21;gbkey=Gene;gene=SCD82.21;gene_biotype=protein_coding;gene_synonym=SCD82.21,yrj1;locus_tag=SCO4650
NC_003888.3	RefSeq	CDS	5074267	5075124	.	+	0	ID=cds4602;Parent=gene4702;Dbxref=Genbank:NP_628811.1,GeneID:1100091;Name=NP_628811.1;Note=SCD82.21%2C yrj1%2C possible lipoprotein%2C len: aa%3B identical to C-terminal of previously sequenced SW:YRJ1_STRCO (EMBL:L24552) Streptomyces coelicolor hypothetical protein in rplJ 5' region (ORF1) (fragment)%2C 256 aa. Contains correctly situated match ot Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCD82.21;product=lipoprotein;protein_id=NP_628811.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5074297	5074329	.	+	.	ID=id5836;Dbxref=GeneID:1100091;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD82.21
NC_003888.3	RefSeq	sequence_feature	5074354	5077471	.	+	.	ID=id5837;Note=previously sequenced fragment (EMBL:L24552);gbkey=misc_feature
NC_003888.3	RefSeq	gene	5075273	5076121	.	+	.	ID=gene4703;Dbxref=GeneID:1100092;Name=SCD82.22;gbkey=Gene;gene=SCD82.22;gene_biotype=protein_coding;gene_synonym=SCD82.22,yjr2;locus_tag=SCO4651
NC_003888.3	RefSeq	CDS	5075273	5076121	.	+	0	ID=cds4603;Parent=gene4703;Dbxref=Genbank:NP_628812.1,GeneID:1100092;Name=NP_628812.1;Note=SCD82.22%2C yjr2%2C possible lipoprotein%2C len: 282 aa%3B identical to previously sequenced SW:YRJ2_STRCO (EMBL:L24552) Streptomyces coelicolor hypothetical 30.0 kD protein in rplJ 5' region (ORF2)%2C 282 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and to entry PS00017 ATP/GTP-binding site motif A (P-loop)%2C also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD82.22;product=lipoprotein;protein_id=NP_628812.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5075315	5075347	.	+	.	ID=id5838;Dbxref=GeneID:1100092;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCD82.22
NC_003888.3	RefSeq	sequence_feature	5075621	5075644	.	+	.	ID=id5839;Dbxref=GeneID:1100092;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD82.22
NC_003888.3	RefSeq	ribosome_entry_site	5076432	5076435	.	+	.	ID=id5840;gbkey=RBS
NC_003888.3	RefSeq	gene	5076440	5076970	.	+	.	ID=gene4704;Dbxref=GeneID:1100093;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;gene_synonym=SCD82.23;locus_tag=SCO4652
NC_003888.3	RefSeq	CDS	5076440	5076970	.	+	0	ID=cds4604;Parent=gene4704;Dbxref=Genbank:NP_628813.1,GeneID:1100093;Name=NP_628813.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=NP_628813.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5076440	5076733	.	+	.	ID=id5841;Dbxref=GeneID:1100093;Note=Pfam match to entry PF00466 Ribosomal_L10%2C Ribosomal protein L10%2C score 134.90%2C E-value 1.4e-36;gbkey=misc_feature;gene=rplJ
NC_003888.3	RefSeq	sequence_feature	5076518	5076559	.	+	.	ID=id5842;Dbxref=GeneID:1100093;Note=PS01109 Ribosomal protein L10 signature;gbkey=misc_feature;gene=rplJ
NC_003888.3	RefSeq	gene	5077088	5077471	.	+	.	ID=gene4705;Dbxref=GeneID:1100094;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;gene_synonym=SCD82.25;locus_tag=SCO4653
NC_003888.3	RefSeq	CDS	5077088	5077471	.	+	0	ID=cds4605;Parent=gene4705;Dbxref=Genbank:NP_628814.1,GeneID:1100094;Name=NP_628814.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=NP_628814.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5077265	5077468	.	+	.	ID=id5843;Dbxref=GeneID:1100094;Note=Pfam match to entry PF00542 Ribosomal_L12%2C Ribosomal protein L7/L12 C-terminal domain%2C score 131.10%2C E-value 2.1e-35;gbkey=misc_feature;gene=rplL
NC_003888.3	RefSeq	ribosome_entry_site	5078047	5078053	.	+	.	ID=id5844;gbkey=RBS
NC_003888.3	RefSeq	gene	5078061	5081546	.	+	.	ID=gene4706;Dbxref=GeneID:1100095;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;gene_synonym=SCD82.26;locus_tag=SCO4654
NC_003888.3	RefSeq	CDS	5078061	5081546	.	+	0	ID=cds4606;Parent=gene4706;Dbxref=Genbank:NP_628815.1,GeneID:1100095;Name=NP_628815.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=NP_628815.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5078361	5081306	.	+	.	ID=id5845;Dbxref=GeneID:1100095;Note=Pfam match to entry PF00562 RNA_pol_B%2C RNA polymerase beta subunit%2C score 1264.40%2C E-value 0;gbkey=misc_feature;gene=rpoB
NC_003888.3	RefSeq	sequence_feature	5080662	5080700	.	+	.	ID=id5846;Dbxref=GeneID:1100095;Note=PS01166 RNA polymerases beta chain signature;gbkey=misc_feature;gene=rpoB
NC_003888.3	RefSeq	ribosome_entry_site	5081626	5081632	.	+	.	ID=id5847;gbkey=RBS
NC_003888.3	RefSeq	gene	5081644	5085543	.	+	.	ID=gene4707;Dbxref=GeneID:1100096;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;gene_synonym=rpoC,SCD40A.01,SCD82.27;locus_tag=SCO4655
NC_003888.3	RefSeq	CDS	5081644	5085543	.	+	0	ID=cds4607;Parent=gene4707;Dbxref=Genbank:NP_733644.1,GeneID:1100096;Name=NP_733644.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;gene=rpoC;product=DNA-directed RNA polymerase subunit beta';protein_id=NP_733644.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5082571	5084352	.	+	.	ID=id5848;Dbxref=GeneID:1100096;Note=Pfam match to entry PF00623 RNA_pol_A%2C RNA polymerase alpha subunit%2C score 859.20%2C E-value 1.3e-254;gbkey=misc_feature;gene=rpoC
NC_003888.3	RefSeq	gene	5085653	5086240	.	+	.	ID=gene4708;Dbxref=GeneID:1100097;Name=SCD40A.02;gbkey=Gene;gene=SCD40A.02;gene_biotype=protein_coding;gene_synonym=SCD40A.02;locus_tag=SCO4656
NC_003888.3	RefSeq	CDS	5085653	5086240	.	+	0	ID=cds4608;Parent=gene4708;Dbxref=Genbank:NP_628816.1,GeneID:1100097;Name=NP_628816.1;Note=SCD40A.02%2C possible integral membrane protein%2C len: 195 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD40A.02;product=hypothetical protein;protein_id=NP_628816.1;transl_table=11
NC_003888.3	RefSeq	gene	5086257	5087561	.	-	.	ID=gene4709;Dbxref=GeneID:1100098;Name=SCD40A.03c;gbkey=Gene;gene=SCD40A.03c;gene_biotype=protein_coding;gene_synonym=SCD40A.03c;locus_tag=SCO4657
NC_003888.3	RefSeq	CDS	5086257	5087561	.	-	0	ID=cds4609;Parent=gene4709;Dbxref=Genbank:NP_628817.1,GeneID:1100098;Name=NP_628817.1;Note=SCD40A.03c%2C possible integral membrane protein%2C len: 434 aa%3B similar to TR:Q9EWX4 (EMBL:AL445403) Streptomyces coelicolor  integral membrane protein 2SCI34.05%2C 396 aa%3B fasta scores: opt: 678 Z-score: 732.5 E(): 3.6e-33%3B 37.923%25 identity in 414 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD40A.03c;product=hypothetical protein;protein_id=NP_628817.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5087565	5087568	.	-	.	ID=id5849;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5087644	5087648	.	+	.	ID=id5850;gbkey=RBS
NC_003888.3	RefSeq	gene	5087653	5088690	.	+	.	ID=gene4710;Dbxref=GeneID:1100099;Name=SCD40A.04;gbkey=Gene;gene=SCD40A.04;gene_biotype=protein_coding;gene_synonym=SCD40A.04;locus_tag=SCO4658
NC_003888.3	RefSeq	CDS	5087653	5088690	.	+	0	ID=cds4610;Parent=gene4710;Dbxref=Genbank:NP_628818.1,GeneID:1100099;Name=NP_628818.1;Note=SCD40A.04%2C possible glucosyltransferase%2C len: 345 aa%3B similar to TR:O21943 (EMBL:AF021347) Bacteriophage SfII bactoprenol glucosyl transferase Bgt%2C 309 aa%3B fasta scores: opt: 728 z-score: 801.5 E(): 0%3B 39.0%25 identity in 305 aa overlap and to SW:YJ43_SYNY3 (EMBL:D90915) Synechocystis sp. hypothetical 37.6 kD protein Slr1943%2C 331 aa%3B fasta scores: opt: 846 z-score: 929.7 E(): 0%3B 42.4%25 identity in 309 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases and possible hydrophobic membrane spanning regions in C-terminal domain;gbkey=CDS;gene=SCD40A.04;product=glucosyltransferase;protein_id=NP_628818.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5087698	5088195	.	+	.	ID=id5851;Dbxref=GeneID:1100099;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 59.60%2C E-value 6.8e-14;gbkey=misc_feature;gene=SCD40A.04
NC_003888.3	RefSeq	ribosome_entry_site	5088937	5088941	.	+	.	ID=id5852;gbkey=RBS
NC_003888.3	RefSeq	gene	5088946	5089317	.	+	.	ID=gene4711;Dbxref=GeneID:1100100;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;gene_synonym=rspL,SCD40A.05;locus_tag=SCO4659
NC_003888.3	RefSeq	CDS	5088946	5089317	.	+	0	ID=cds4611;Parent=gene4711;Dbxref=Genbank:NP_628819.1,GeneID:1100100;Name=NP_628819.1;Note=interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance;gbkey=CDS;gene=rpsL;product=30S ribosomal protein S12;protein_id=NP_628819.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5088946	5089314	.	+	.	ID=id5853;Dbxref=GeneID:1100100;Note=Pfam match to entry PF00164 Ribosomal_S12%2C Ribosomal protein S12%2C score 277.20%2C E-value 2.1e-79;gbkey=misc_feature;gene=rpsL
NC_003888.3	RefSeq	sequence_feature	5089072	5089095	.	+	.	ID=id5854;Dbxref=GeneID:1100100;Note=PS00055 Ribosomal protein S12 signature;gbkey=misc_feature;gene=rpsL
NC_003888.3	RefSeq	ribosome_entry_site	5089308	5089312	.	+	.	ID=id5855;Dbxref=GeneID:1100100;gbkey=RBS;gene=rpsL
NC_003888.3	RefSeq	gene	5089320	5089790	.	+	.	ID=gene4712;Dbxref=GeneID:1100101;Name=rspG;gbkey=Gene;gene=rspG;gene_biotype=protein_coding;gene_synonym=rspG,SCD40A.06;locus_tag=SCO4660
NC_003888.3	RefSeq	CDS	5089320	5089790	.	+	0	ID=cds4612;Parent=gene4712;Dbxref=Genbank:NP_628820.1,GeneID:1100101;Name=NP_628820.1;Note=binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit;gbkey=CDS;gene=rspG;product=30S ribosomal protein S7;protein_id=NP_628820.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5089320	5089787	.	+	.	ID=id5856;Dbxref=GeneID:1100101;Note=Pfam match to entry PF00177 Ribosomal_S7%2C Ribosomal protein S7p/S5e%2C score 311.50%2C E-value 9.7e-90;gbkey=misc_feature;gene=rspG
NC_003888.3	RefSeq	sequence_feature	5089377	5089457	.	+	.	ID=id5857;Dbxref=GeneID:1100101;Note=PS00052 Ribosomal protein S7 signature;gbkey=misc_feature;gene=rspG
NC_003888.3	RefSeq	gene	5089830	5091956	.	+	.	ID=gene4713;Dbxref=GeneID:1100102;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;gene_synonym=fusA;locus_tag=SCO4661
NC_003888.3	RefSeq	CDS	5089830	5091956	.	+	0	ID=cds4613;Parent=gene4713;Dbxref=Genbank:NP_628821.1,GeneID:1100102;Name=NP_628821.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=NP_628821.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5089854	5091329	.	+	.	ID=id5858;Dbxref=GeneID:1100102;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family%2C score 691.50%2C E-value 4.2e-204;gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	5089881	5089904	.	+	.	ID=id5859;Dbxref=GeneID:1100102;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	5089983	5090030	.	+	.	ID=id5860;Dbxref=GeneID:1100102;Note=PS00301 GTP-binding elongation factors signature;gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	5091402	5091920	.	+	.	ID=id5861;Dbxref=GeneID:1100102;Note=Pfam match to entry PF00679 EFG_C%2C Elongation factor G C-terminus%2C score 370.50%2C E-value 1.8e-107;gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	5091675	5093323	.	+	.	ID=id5862;Note=previously sequenced fragment EMBL:X77039;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5092119	5092124	.	+	.	ID=id5863;gbkey=RBS
NC_003888.3	RefSeq	gene	5092130	5093323	.	+	.	ID=gene4714;Dbxref=GeneID:1100103;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SCO4662
NC_003888.3	RefSeq	CDS	5092130	5093323	.	+	0	ID=cds4614;Parent=gene4714;Dbxref=Genbank:NP_628822.1,GeneID:1100103;Name=NP_628822.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=NP_628822.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5092157	5093260	.	+	.	ID=id5864;Dbxref=GeneID:1100103;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family%2C score 528.80%2C E-value 3.8e-155;gbkey=misc_feature;gene=tuf
NC_003888.3	RefSeq	sequence_feature	5092184	5092207	.	+	.	ID=id5865;Dbxref=GeneID:1100103;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=tuf
NC_003888.3	RefSeq	sequence_feature	5092286	5092333	.	+	.	ID=id5866;Dbxref=GeneID:1100103;Note=PS00301 GTP-binding elongation factors signature;gbkey=misc_feature;gene=tuf
NC_003888.3	RefSeq	gene	5093313	5093666	.	-	.	ID=gene4715;Dbxref=GeneID:1100104;Name=SCD40A.09c;gbkey=Gene;gene=SCD40A.09c;gene_biotype=protein_coding;gene_synonym=SCD40A.09c;locus_tag=SCO4663
NC_003888.3	RefSeq	CDS	5093313	5093666	.	-	0	ID=cds4615;Parent=gene4715;Dbxref=Genbank:NP_628823.1,GeneID:1100104;Name=NP_628823.1;Note=SCD40A.09c%2C unknown%2C len: 117 aa;gbkey=CDS;gene=SCD40A.09c;product=hypothetical protein;protein_id=NP_628823.1;transl_table=11
NC_003888.3	RefSeq	gene	5093796	5095631	.	-	.	ID=gene4716;Dbxref=GeneID:1100105;Name=SCD40A.10c;gbkey=Gene;gene=SCD40A.10c;gene_biotype=protein_coding;gene_synonym=SCD40A.10c;locus_tag=SCO4664
NC_003888.3	RefSeq	CDS	5093796	5095631	.	-	0	ID=cds4616;Parent=gene4716;Dbxref=Genbank:NP_628824.1,GeneID:1100105;Name=NP_628824.1;Note=SCD40A.10c%2C possible membrane protein%2C len: 611 aa%3B similar to C-terminal region of TR:CAB71211 (EMBL:AL138538) Streptomyces coelicolor membrane protein SC6D10.16%2C 907 aa%3B fasta scores: opt: 262 z-score: 270.5 E(): 1.2e-07%3B 29.0%25 identity in 630 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD40A.10c;product=hypothetical protein;protein_id=NP_628824.1;transl_table=11
NC_003888.3	RefSeq	gene	5095647	5096276	.	-	.	ID=gene4717;Dbxref=GeneID:1100106;Name=SCD40A.11c;gbkey=Gene;gene=SCD40A.11c;gene_biotype=protein_coding;gene_synonym=SCD40A.11c;locus_tag=SCO4665
NC_003888.3	RefSeq	CDS	5095647	5096276	.	-	0	ID=cds4617;Parent=gene4717;Dbxref=Genbank:NP_628825.1,GeneID:1100106;Name=NP_628825.1;Note=SCD40A.11c%2C possible membrane protein%2C len: 209 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD40A.11c;product=hypothetical protein;protein_id=NP_628825.1;transl_table=11
NC_003888.3	RefSeq	gene	5096270	5097010	.	-	.	ID=gene4718;Dbxref=GeneID:1100107;Name=SCD40A.12c;gbkey=Gene;gene=SCD40A.12c;gene_biotype=protein_coding;gene_synonym=SCD40A.12c;locus_tag=SCO4666
NC_003888.3	RefSeq	CDS	5096270	5097010	.	-	0	ID=cds4618;Parent=gene4718;Dbxref=Genbank:NP_628826.1,GeneID:1100107;Name=NP_628826.1;Note=SCD840A.12c%2C possible ABC-transporter ATP-binding protein%2C len: 246 aa%3B similar to TR:Q9XAA7 (EMBL:AL096837) Streptomyces coelicolor ABC-transporter ATP-binding protein SCF43A.08%2C 264 aa%3B fasta scores: opt: 984 z-score: 1127.0 E(): 0%3B 64.0%25 identity in 239 aa overlap and to TR:CAB76999 (EMBL:AL159178) Streptomyces coelicolor  ABC transporter ATP-binding protein SCH22A.30%2C 252 aa%3B fasta scores: opt: 907 z-score: 718.9 E(): 1.5e-34%3B 61.0%25 identity in 236 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCD40A.12c;product=ABC transporter ATP-binding protein;protein_id=NP_628826.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5096284	5096288	.	-	.	ID=id5867;Dbxref=GeneID:1100107;gbkey=RBS;gene=SCD40A.12c
NC_003888.3	RefSeq	sequence_feature	5096351	5096905	.	-	.	ID=id5868;Dbxref=GeneID:1100107;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 217.10%2C E-value 2.6e-61;gbkey=misc_feature;gene=SCD40A.12c
NC_003888.3	RefSeq	sequence_feature	5096534	5096578	.	-	.	ID=id5869;Dbxref=GeneID:1100107;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCD40A.12c
NC_003888.3	RefSeq	sequence_feature	5096861	5096884	.	-	.	ID=id5870;Dbxref=GeneID:1100107;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD40A.12c
NC_003888.3	RefSeq	ribosome_entry_site	5097014	5097018	.	-	.	ID=id5871;gbkey=RBS
NC_003888.3	RefSeq	gene	5097181	5098476	.	+	.	ID=gene4719;Dbxref=GeneID:1100108;Name=SCD40A.13;gbkey=Gene;gene=SCD40A.13;gene_biotype=protein_coding;gene_synonym=SCD40A.13;locus_tag=SCO4667
NC_003888.3	RefSeq	CDS	5097181	5098476	.	+	0	ID=cds4619;Parent=gene4719;Dbxref=Genbank:NP_628827.1,GeneID:1100108;Name=NP_628827.1;Note=SCD40A.13%2C possible two-component system sensor kinase%2C len: 431 aa%3B C-terminal region similar to TR:Q9ZBS5 (EMBL:AL034446) Streptomyces coelicolor sensor kinase SC1A9.27c%2C 303 aa%3B fasta scores: opt: 378 z-score: 412.0 E(): 1.6e-15%3B 31.9%25 identity in 313 aa overlap. Contains possible N-terminal region hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD40A.13;product=two-component system sensor kinase;protein_id=NP_628827.1;transl_table=11
NC_003888.3	RefSeq	gene	5098476	5099108	.	+	.	ID=gene4720;Dbxref=GeneID:1100109;Name=SCD40A.14;gbkey=Gene;gene=SCD40A.14;gene_biotype=protein_coding;gene_synonym=SCD40A.14;locus_tag=SCO4668
NC_003888.3	RefSeq	CDS	5098476	5099108	.	+	0	ID=cds4620;Parent=gene4720;Dbxref=Genbank:NP_628828.1,GeneID:1100109;Name=NP_628828.1;Note=SCD40A.14%2C possible two-component system response regulator%2C len: 210 aa%3B similar to TR:CAB61727 (EMBL:AL133220) Streptomyces coelicolor SCC75A.27c%2C 228 aa%3B fasta scores: opt: 732 z-score: 839.5 E(): 0%3B 58.6%25 identity in 210 aa overlap. Contains two Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Contains also possible helix-turn-helix motif at residues 162..183 (+3.44 SD);gbkey=CDS;gene=SCD40A.14;product=two-component system response regulator;protein_id=NP_628828.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5098494	5098829	.	+	.	ID=id5872;Dbxref=GeneID:1100109;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 39.00%2C E-value 1.1e-07;gbkey=misc_feature;gene=SCD40A.14
NC_003888.3	RefSeq	sequence_feature	5098905	5099102	.	+	.	ID=id5873;Dbxref=GeneID:1100109;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 39.50%2C E-value 7.8e-08;gbkey=misc_feature;gene=SCD40A.14
NC_003888.3	RefSeq	gene	5099276	5100415	.	+	.	ID=gene4721;Dbxref=GeneID:1100110;Name=SCD40A.15;gbkey=Gene;gene=SCD40A.15;gene_biotype=protein_coding;gene_synonym=SCD40A.15;locus_tag=SCO4669
NC_003888.3	RefSeq	CDS	5099276	5100415	.	+	0	ID=cds4621;Parent=gene4721;Dbxref=Genbank:NP_628829.1,GeneID:1100110;Name=NP_628829.1;Note=SCD40A.15%2C possible membrane protein%2C len: 379 aa%3B similar to TR:CAB66261 (EMBL:AL136518) Streptomyces coelicolor  membrane protein SCC123.21c%2C 356 aa%3B fasta scores: opt: 350 z-score: 356.2 E(): 2.1e-12%3B 30.1%25 identity in 356 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD40A.15;product=hypothetical protein;protein_id=NP_628829.1;transl_table=11
NC_003888.3	RefSeq	gene	5100500	5101891	.	-	.	ID=gene4722;Dbxref=GeneID:1100111;Name=SCD40A.16c;gbkey=Gene;gene=SCD40A.16c;gene_biotype=protein_coding;gene_synonym=SCD40A.16c;locus_tag=SCO4670
NC_003888.3	RefSeq	CDS	5100500	5101891	.	-	0	ID=cds4622;Parent=gene4722;Dbxref=Genbank:NP_628830.1,GeneID:1100111;Name=NP_628830.1;Note=SCD840A.16c%2C probable serine protease precursor%2C len: 463 aa%3B similar to SW:PRTC_STRGR (EMBL:L29018) Streptomyces griseus serine protease C precursor (EC 3.4.21.-) SprC%2C 457 aa%3B fasta scores: opt: 1761 z-score: 1679.7 E(): 0%3B 59.4%25 identity in 458 aa overlap and to TR:Q9XA96 (EMBL:AL096837) Streptomyces coelicolor serine protease SCF43A.19%2C 458 aa%3B fasta scores: opt: 1637 z-score: 1264.0 E(): 0%3B 55.9%25 identity in 460 aa overlap. Contains Pfam match to entry PF00089 trypsin%2C Trypsin and matches to Prosite entries PS00135 Serine proteases%2C trypsin family%2C serine active site and PS00178 Aminoacyl-transfer RNA synthetases class-I signature. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD40A.16c;product=serine protease;protein_id=NP_628830.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5100581	5100610	.	-	.	ID=id5874;Dbxref=GeneID:1100111;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=SCD40A.16c
NC_003888.3	RefSeq	sequence_feature	5100731	5101267	.	-	.	ID=id5875;Dbxref=GeneID:1100111;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 58.90%2C E-value 7.8e-18;gbkey=misc_feature;gene=SCD40A.16c
NC_003888.3	RefSeq	sequence_feature	5100824	5100859	.	-	.	ID=id5876;Dbxref=GeneID:1100111;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=misc_feature;gene=SCD40A.16c
NC_003888.3	RefSeq	ribosome_entry_site	5101899	5101903	.	-	.	ID=id5877;gbkey=RBS
NC_003888.3	RefSeq	gene	5102043	5102990	.	-	.	ID=gene4723;Dbxref=GeneID:1100112;Name=SCD40A.17c;gbkey=Gene;gene=SCD40A.17c;gene_biotype=protein_coding;gene_synonym=SCD40A.17c;locus_tag=SCO4671
NC_003888.3	RefSeq	CDS	5102043	5102990	.	-	0	ID=cds4623;Parent=gene4723;Dbxref=Genbank:NP_628831.1,GeneID:1100112;Name=NP_628831.1;Note=SCD40A.17c%2C probable lysR-family regulatory protein%2C len: 315 aa%3B similar to SW:MPRR_STRCO (EMBL:Z11929) Streptomyces coelicolor small neutral protease regulatory protein MprR%2C 316 aa%3B fasta scores: opt: 541 z-score: 619.1 E(): 4.7e-27%3B 36.7%25 identity in 308 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Contains also possible helix-turn-helix motif at residues 18..39 (+4.31 SD). Contains also TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCD40A.17c;product=LysR family transcriptional regulator;protein_id=NP_628831.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5102550	5102978	.	-	.	ID=id5878;Dbxref=GeneID:1100112;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 99.80%2C E-value 5.3e-26;gbkey=misc_feature;gene=SCD40A.17c
NC_003888.3	RefSeq	sequence_feature	5102673	5102675	.	-	.	ID=id5879;Dbxref=GeneID:1100112;Note=TTA Leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD40A.17c
NC_003888.3	RefSeq	sequence_feature	5102844	5102936	.	-	.	ID=id5880;Dbxref=GeneID:1100112;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCD40A.17c
NC_003888.3	RefSeq	gene	5103076	5104845	.	-	.	ID=gene4724;Dbxref=GeneID:1100113;Name=SCD40A.18c;gbkey=Gene;gene=SCD40A.18c;gene_biotype=protein_coding;gene_synonym=SCD40A.18c;locus_tag=SCO4672
NC_003888.3	RefSeq	CDS	5103076	5104845	.	-	0	ID=cds4624;Parent=gene4724;Dbxref=Genbank:NP_628832.1,GeneID:1100113;Name=NP_628832.1;Note=SCD40A.18c%2C possible hypothetical protein%2C len: 589 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD40A.18c;product=hypothetical protein;protein_id=NP_628832.1;transl_table=11
NC_003888.3	RefSeq	gene	5104850	5105869	.	-	.	ID=gene4725;Dbxref=GeneID:1100114;Name=SCD40A.19c;gbkey=Gene;gene=SCD40A.19c;gene_biotype=protein_coding;gene_synonym=SCD40A.19c;locus_tag=SCO4673
NC_003888.3	RefSeq	CDS	5104850	5105869	.	-	0	ID=cds4625;Parent=gene4725;Dbxref=Genbank:NP_628833.1,GeneID:1100114;Name=NP_628833.1;Note=SCD40A.19c%2C possible deoR-family transcriptional regulator%2C len: 339 aa%3B similar to TR:Q54822 (EMBL:L37338) Streptomyces peucetius repressor DnrO%2C 340 aa%3B fasta scores: opt: 660 z-score: 749.1 E(): 0%3B 38.7%25 identity in 333 aa overlap. Contains match to Prosite entry PS00894 Bacterial regulatory proteins%2C deoR family signature and possible helix-turn-helix motif at residues 27..48 (+5.18 SD);gbkey=CDS;gene=SCD40A.19c;product=DeoR family transcriptional regulator;protein_id=NP_628833.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5105729	5105833	.	-	.	ID=id5881;Dbxref=GeneID:1100114;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature;gbkey=misc_feature;gene=SCD40A.19c
NC_003888.3	RefSeq	gene	5105881	5106318	.	+	.	ID=gene4726;Dbxref=GeneID:1100115;Name=SCD40A.20;gbkey=Gene;gene=SCD40A.20;gene_biotype=protein_coding;gene_synonym=SCD40A.20;locus_tag=SCO4674
NC_003888.3	RefSeq	CDS	5105881	5106318	.	+	0	ID=cds4626;Parent=gene4726;Dbxref=Genbank:NP_628834.1,GeneID:1100115;Name=NP_628834.1;Note=SCD40A.20%2C hypothetical protein%2C len: 145 aa%3B similar to TR:O06633 (EMBL:Z95618) Mycobacterium tuberculosis hypothetical 12.5 kD protein MTCY07H7A.08c%2C 115 aa%3B fasta scores: opt: 249 z-score: 314.3 E(): 4.5e-10%3B 39.5%25 identity in 119 aa overlap;gbkey=CDS;gene=SCD40A.20;product=hypothetical protein;protein_id=NP_628834.1;transl_table=11
NC_003888.3	RefSeq	gene	5106331	5107239	.	-	.	ID=gene4727;Dbxref=GeneID:1100116;Name=SCD40A.21c;gbkey=Gene;gene=SCD40A.21c;gene_biotype=protein_coding;gene_synonym=SCD40A.21c;locus_tag=SCO4675
NC_003888.3	RefSeq	CDS	5106331	5107239	.	-	0	ID=cds4627;Parent=gene4727;Dbxref=Genbank:NP_628835.1,GeneID:1100116;Name=NP_628835.1;Note=SCD40A.21c%2C hypothetical protein%2C len: 302 aa%3B similar to TR:Q9XD94 (EMBL:AF106004) Streptomyces coelicolor hypothetical 34.1 kD protein%2C 304 aa%3B fasta scores: opt: 850 z-score: 992.1 E(): 0%3B 45.0%25 identity in 300 aa overlap. Contains match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SCD40A.21c;product=hypothetical protein;protein_id=NP_628835.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5107117	5107203	.	-	.	ID=id5882;Dbxref=GeneID:1100116;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCD40A.21c
NC_003888.3	RefSeq	gene	5107257	5108129	.	-	.	ID=gene4728;Dbxref=GeneID:1100117;Name=SCD31.01c;gbkey=Gene;gene=SCD31.01c;gene_biotype=protein_coding;gene_synonym=SCD31.01c,SCD40A.22c;locus_tag=SCO4676
NC_003888.3	RefSeq	CDS	5107257	5108129	.	-	0	ID=cds4628;Parent=gene4728;Dbxref=Genbank:NP_733645.1,GeneID:1100117;Name=NP_733645.1;Note=SCD31.01c%2C unknown (fragment)%2C len: >147 aa~SCD40A.22c%2C unknown (fragment)%2C len: > 176 aa;gbkey=CDS;gene=SCD31.01c;product=hypothetical protein;protein_id=NP_733645.1;transl_table=11
NC_003888.3	RefSeq	gene	5108377	5108811	.	-	.	ID=gene4729;Dbxref=GeneID:1100118;Name=SCD31.02c;gbkey=Gene;gene=SCD31.02c;gene_biotype=protein_coding;gene_synonym=SCD31.02c;locus_tag=SCO4677
NC_003888.3	RefSeq	CDS	5108377	5108811	.	-	0	ID=cds4629;Parent=gene4729;Dbxref=Genbank:NP_628836.1,GeneID:1100118;Name=NP_628836.1;Note=SCD31.02c%2C possible regulatory protein%2C len: 144 aa%3B similar to TR:CAB60156 (EMBL:AL132824) Streptomyces coelicolor  regulatory protein SCAH10.02%2C 160 aa%3B fasta scores: opt: 396 z-score: 500.7 E(): 1.9e-20%3B 51.7%25 identity in 143 aa overlap;gbkey=CDS;gene=SCD31.02c;product=regulatory protein;protein_id=NP_628836.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5108919	5108923	.	+	.	ID=id5883;gbkey=RBS
NC_003888.3	RefSeq	gene	5108924	5109772	.	+	.	ID=gene4730;Dbxref=GeneID:1100119;Name=SCD31.03;gbkey=Gene;gene=SCD31.03;gene_biotype=protein_coding;gene_synonym=SCD31.03;locus_tag=SCO4678
NC_003888.3	RefSeq	CDS	5108924	5109772	.	+	0	ID=cds4630;Parent=gene4730;Dbxref=Genbank:NP_628837.1,GeneID:1100119;Name=NP_628837.1;Note=SCD31.03%2C conserved hypothetical protein%2C len: 282 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB66187 (EMBL:AL136500) Streptomyces coelicolor hypothetical 31.7 kD protein SC1G2.15c%2C 284 aa%3B fasta scores: opt: 1359 z-score: 1611.1 E(): 0%3B 71.7%25 identity in 279 aa overlap;gbkey=CDS;gene=SCD31.03;product=hypothetical protein;protein_id=NP_628837.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5109761	5109764	.	+	.	ID=id5884;Dbxref=GeneID:1100119;gbkey=RBS;gene=SCD31.03
NC_003888.3	RefSeq	gene	5109769	5109960	.	+	.	ID=gene4731;Dbxref=GeneID:1100120;Name=SCD31.04;gbkey=Gene;gene=SCD31.04;gene_biotype=protein_coding;gene_synonym=SCD31.04;locus_tag=SCO4679
NC_003888.3	RefSeq	CDS	5109769	5109960	.	+	0	ID=cds4631;Parent=gene4731;Dbxref=Genbank:NP_628838.1,GeneID:1100120;Name=NP_628838.1;Note=SCD31.04%2C conserved hypothetical protein%2C len: 63 aa%3B similar to TR:CAB66186 (EMBL:AL136500) Streptomyces coelicolor hypothetical 7.7 kD protein SC1G2.14c%2C 73 aa%3B fasta scores: opt: 265 z-score: 399.0 E(): 8.5e-15%3B 66.0%25 identity in 53 aa overlap;gbkey=CDS;gene=SCD31.04;product=hypothetical protein;protein_id=NP_628838.1;transl_table=11
NC_003888.3	RefSeq	gene	5109911	5110801	.	-	.	ID=gene4732;Dbxref=GeneID:1100121;Name=SCD31.05c;gbkey=Gene;gene=SCD31.05c;gene_biotype=protein_coding;gene_synonym=SCD31.05c;locus_tag=SCO4680
NC_003888.3	RefSeq	CDS	5109911	5110801	.	-	0	ID=cds4632;Parent=gene4732;Dbxref=Genbank:NP_628839.1,GeneID:1100121;Name=NP_628839.1;Note=SCD31.05c%2C possible DNA-binding protein%2C len: 296 aa%3B similar to TR:CAB53273 (EMBL:AL109972) Streptomyces coelicolor DNA binding protein SCJ9A.12c%2C 279 aa%3B fasta scores: opt: 782 z-score: 910.0 E(): 0%3B 46.1%25 identity in 271 aa overlap;gbkey=CDS;gene=SCD31.05c;product=DNA-binding protein;protein_id=NP_628839.1;transl_table=11
NC_003888.3	RefSeq	gene	5110846	5111655	.	+	.	ID=gene4733;Dbxref=GeneID:1100122;Name=SCD31.06;gbkey=Gene;gene=SCD31.06;gene_biotype=protein_coding;gene_synonym=SCD31.06;locus_tag=SCO4681
NC_003888.3	RefSeq	CDS	5110846	5111655	.	+	0	ID=cds4633;Parent=gene4733;Dbxref=Genbank:NP_628840.1,GeneID:1100122;Name=NP_628840.1;Note=SCD31.06%2C probable short chain dehydrogenase%2C len: 296 aa%3B similar to TR:CAB56135 (EMBL:AL117669) Streptomyces coelicolor  short chain dehydrogenase SCF12.09%2C 249 aa%3B fasta scores: opt: 1003 z-score: 1070.0 E(): 0%3B 65.2%25 identity in 244 aa overlap and to SW:SDR1_PICAB (EMBL:X74115) Picea abies short-chain type dehydrogenase/reductase (EC 1.-.-.-) Sdr1%2C271 aa%3B fasta scores: opt: 576 z-score: 619.1 E(): 4.7e-27%3B 47.8%25 identity in 251 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus;gbkey=CDS;gene=SCD31.06;product=short chain dehydrogenase;protein_id=NP_628840.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5110933	5111484	.	+	.	ID=id5885;Dbxref=GeneID:1100122;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 199.10%2C E-value 7.1e-56;gbkey=misc_feature;gene=SCD31.06
NC_003888.3	RefSeq	sequence_feature	5111545	5111637	.	+	.	ID=id5886;Dbxref=GeneID:1100122;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 36.40%2C E-value 1.2e-08;gbkey=misc_feature;gene=SCD31.06
NC_003888.3	RefSeq	gene	5111657	5111866	.	+	.	ID=gene4734;Dbxref=GeneID:1100123;Name=SCD31.07;gbkey=Gene;gene=SCD31.07;gene_biotype=protein_coding;gene_synonym=SCD31.07;locus_tag=SCO4682
NC_003888.3	RefSeq	CDS	5111657	5111866	.	+	0	ID=cds4634;Parent=gene4734;Dbxref=Genbank:NP_628841.1,GeneID:1100123;Name=NP_628841.1;Note=SCD31.07%2C possible tautomerase%2C len: 69 aa%3B similar to TR:O25581 (EMBL:AE000602) Helicobacter pylori 4-oxalocrotonate tautomerase (DmpI) HP0924%2C 68 aa%3B fasta scores: opt: 114 z-score: 175.1 E(): 0.025%3B 32.2%25 identity in 59 aa overlap. Contains Pfam match to entry PF01361 Tautomerase%2C Tautomerase enzyme;gbkey=CDS;gene=SCD31.07;product=tautomerase;protein_id=NP_628841.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5111705	5111821	.	+	.	ID=id5887;Dbxref=GeneID:1100123;Note=Pfam match to entry PF01361 Tautomerase%2C Tautomerase enzyme%2C score 26.60%2C E-value 0.00059;gbkey=misc_feature;gene=SCD31.07
NC_003888.3	RefSeq	gene	5112014	5113399	.	+	.	ID=gene4735;Dbxref=GeneID:1100124;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;gene_synonym=gdhA,SCD31.08;locus_tag=SCO4683
NC_003888.3	RefSeq	CDS	5112014	5113399	.	+	0	ID=cds4635;Parent=gene4735;Dbxref=Genbank:NP_628842.1,GeneID:1100124;Name=NP_628842.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;gene=gdhA;product=glutamate dehydrogenase;protein_id=NP_628842.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5112221	5113390	.	+	.	ID=id5888;Dbxref=GeneID:1100124;Note=Pfam match to entry PF00208 GLFV_dehydrog%2C Glutamate/Leucine/Phenylalanine/Valine dehydrogenase%2C score 610.80%2C E-value 7.8e-180;gbkey=misc_feature;gene=gdhA
NC_003888.3	RefSeq	sequence_feature	5112416	5112457	.	+	.	ID=id5889;Dbxref=GeneID:1100124;Note=PS00074 Glu / Leu / Phe / Val dehydrogenases active site;gbkey=misc_feature;gene=gdhA
NC_003888.3	RefSeq	ribosome_entry_site	5113737	5113741	.	+	.	ID=id5890;gbkey=RBS
NC_003888.3	RefSeq	gene	5113748	5113951	.	+	.	ID=gene4736;Dbxref=GeneID:1100125;Name=SCD31.09;gbkey=Gene;gene=SCD31.09;gene_biotype=protein_coding;gene_synonym=SCD31.09,scoF3;locus_tag=SCO4684
NC_003888.3	RefSeq	CDS	5113748	5113951	.	+	0	ID=cds4636;Parent=gene4736;Dbxref=Genbank:NP_628843.1,GeneID:1100125;Name=NP_628843.1;Note=SCD31.09%2C scoF3%2C cold shock protein%2C len: 67 aa%3B highly similar to TR:O54117 (EMBL:AL021529) Streptomyces coelicolor cold-shock domain protein SC10A5.26c%2C 67 aa%3B fasta scores: opt: 432 z-score: 604.3 E(): 3.1e-26%3B 97.0%25 identity in 67 aa overlap and to SW:CSPF_STRCO (EMBL:X92686) Streptomyces coelicolor cold shock protein ScoF%2C 67 aa%3B fasta scores: opt: 370 z-score: 520.7 E(): 1.4e-21%3B 80.6%25 identity in 67 aa overlap. Contains Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain and match to Prosite entry PS00352 'Cold-shock' DNA-binding domain signature;gbkey=CDS;gene=SCD31.09;product=cold shock protein;protein_id=NP_628843.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5113748	5113948	.	+	.	ID=id5891;Dbxref=GeneID:1100125;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 137.80%2C E-value 2e-37;gbkey=misc_feature;gene=SCD31.09
NC_003888.3	RefSeq	sequence_feature	5113790	5113849	.	+	.	ID=id5892;Dbxref=GeneID:1100125;Note=PS00352 'Cold-shock' DNA-binding domain signature;gbkey=misc_feature;gene=SCD31.09
NC_003888.3	RefSeq	stem_loop	5113979	5114022	.	+	.	ID=id5893;Note=6292 TGCAGCTGGGGCCCGCATCC 6311-6316 GGGTGCGGGCCCCAGCTGCA 6335. 19/20 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5114147	5115568	.	+	.	ID=gene4737;Dbxref=GeneID:1100126;Name=SCD31.10;gbkey=Gene;gene=SCD31.10;gene_biotype=protein_coding;gene_synonym=SCD31.10;locus_tag=SCO4685
NC_003888.3	RefSeq	CDS	5114147	5115568	.	+	0	ID=cds4637;Parent=gene4737;Dbxref=Genbank:NP_628844.1,GeneID:1100126;Name=NP_628844.1;Note=SCD31.10%2C probable DEAD-box RNA helicase%2C len: 473 aa%3B similar to TR:O54116 (EMBL:AL021529) Streptomyces coelicolor DEAD-box RNA helicase SC10A5.25c%2C 498 aa%3B fasta scores: opt: 2591 z-score: 2737.2 E(): 0%3B 88.1%25 identity in 461 aa overlap and to SW:RHLE_ECOLI (EMBL:L02123) Escherichia coli ATP-dependent RNA helicase RhlE%2C 454 aa%3B fasta scores: opt: 845 z-score: 896.7 E(): 0%3B 36.8%25 identity in 427 aa overlap. Contains Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain 2x PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD31.10;product=DEAD/DEAH box helicase;protein_id=NP_628844.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5114318	5114953	.	+	.	ID=id5894;Dbxref=GeneID:1100126;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 192.10%2C E-value 8.3e-60;gbkey=misc_feature;gene=SCD31.10
NC_003888.3	RefSeq	sequence_feature	5114395	5114405	.	+	.	ID=id5895;Dbxref=GeneID:1100126;Note=possible cold-shock box. E. coli cold shock box(5'-TGACGTACAGA-3')%3B Anabaena cold shock box%2C 5'-TGACAGGCCGA-3';gbkey=misc_feature;gene=SCD31.10
NC_003888.3	RefSeq	sequence_feature	5114411	5114434	.	+	.	ID=id5896;Dbxref=GeneID:1100126;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD31.10
NC_003888.3	RefSeq	sequence_feature	5115038	5115283	.	+	.	ID=id5897;Dbxref=GeneID:1100126;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 105.10%2C E-value 1.4e-27;gbkey=misc_feature;gene=SCD31.10
NC_003888.3	RefSeq	sequence_feature	5115080	5115103	.	+	.	ID=id5898;Dbxref=GeneID:1100126;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD31.10
NC_003888.3	RefSeq	ribosome_entry_site	5115603	5115607	.	+	.	ID=id5899;gbkey=RBS
NC_003888.3	RefSeq	gene	5115614	5115925	.	+	.	ID=gene4738;Dbxref=GeneID:1100127;Name=SCD31.11;gbkey=Gene;gene=SCD31.11;gene_biotype=protein_coding;gene_synonym=SCD31.11;locus_tag=SCO4686
NC_003888.3	RefSeq	CDS	5115614	5115925	.	+	0	ID=cds4638;Parent=gene4738;Dbxref=Genbank:NP_628845.1,GeneID:1100127;Name=NP_628845.1;Note=SCD31.11%2C hypothetical protein%2C len: 103 aa%3B similar to TR:O54115 (EMBL:AL021529) Streptomyces coelicolor hypothetical 14.3 kD protein SC10A5.24c%2C 134 aa%3B fasta scores: opt: 353 z-score: 464.3 E(): 2e-18%3B 75.3%25 identity in 73 aa overlap;gbkey=CDS;gene=SCD31.11;product=hypothetical protein;protein_id=NP_628845.1;transl_table=11
NC_003888.3	RefSeq	gene	5115961	5116320	.	-	.	ID=gene4739;Dbxref=GeneID:1100128;Name=SCD31.12c;gbkey=Gene;gene=SCD31.12c;gene_biotype=protein_coding;gene_synonym=SCD31.12c;locus_tag=SCO4687
NC_003888.3	RefSeq	CDS	5115961	5116320	.	-	0	ID=cds4639;Parent=gene4739;Dbxref=Genbank:NP_628846.1,GeneID:1100128;Name=NP_628846.1;Note=SCD31.12c%2C unknown%2C len: 119 aa;gbkey=CDS;gene=SCD31.12c;product=hypothetical protein;protein_id=NP_628846.1;transl_table=11
NC_003888.3	RefSeq	gene	5116372	5116728	.	-	.	ID=gene4740;Dbxref=GeneID:1100129;Name=SCD31.13c;gbkey=Gene;gene=SCD31.13c;gene_biotype=protein_coding;gene_synonym=SCD31.13c;locus_tag=SCO4688
NC_003888.3	RefSeq	CDS	5116372	5116728	.	-	0	ID=cds4640;Parent=gene4740;Dbxref=Genbank:NP_628847.1,GeneID:1100129;Name=NP_628847.1;Note=SCD31.13c%2C hypothetical protein%2C len: 118 aa%3B highly similar to TR:O54113 (EMBL:AL021529) Streptomyces coelicolor hypothetical 12.6 kD protein SC10A5.22%2C 112 aa%3B fasta scores: opt: 579 z-score: 753.8 E(): 0%3B 87.0%25 identity in 100 aa overlap;gbkey=CDS;gene=SCD31.13c;product=hypothetical protein;protein_id=NP_628847.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5116734	5116738	.	-	.	ID=id5900;gbkey=RBS
NC_003888.3	RefSeq	gene	5117228	5117560	.	+	.	ID=gene4741;Dbxref=GeneID:1100130;Name=SCD31.14;gbkey=Gene;gene=SCD31.14;gene_biotype=protein_coding;gene_synonym=SCD31.14;locus_tag=SCO4689
NC_003888.3	RefSeq	CDS	5117228	5117560	.	+	0	ID=cds4641;Parent=gene4741;Dbxref=Genbank:NP_628848.1,GeneID:1100130;Name=NP_628848.1;Note=SCD31.14%2C hypothetical protein%2C len: 110 aa%3B similar to TR:O06194 (EMBL:Z95387) Mycobacterium tuberculosis hypothetical 12.3 kD protein MTCY1A10.14%2C 117 aa%3B fasta scores: opt: 407 z-score: 548.1 E(): 4.2e-23%3B 56.0%25 identity in 109 aa overlap;gbkey=CDS;gene=SCD31.14;product=hypothetical protein;protein_id=NP_628848.1;transl_table=11
NC_003888.3	RefSeq	gene	5117634	5117876	.	+	.	ID=gene4742;Dbxref=GeneID:1100131;Name=SCD31.15;gbkey=Gene;gene=SCD31.15;gene_biotype=protein_coding;gene_synonym=SCD31.15;locus_tag=SCO4690
NC_003888.3	RefSeq	CDS	5117634	5117876	.	+	0	ID=cds4642;Parent=gene4742;Dbxref=Genbank:NP_628849.1,GeneID:1100131;Name=NP_628849.1;Note=SCD31.15%2C possible membrane protein%2C len: 80 aa%3B similar to N-terminal region of TR:Q9WX28 (EMBL:AL079345) Streptomyces coelicolor membrane protein SCE68.03%2C 441 aa%3B fasta scores: opt: 237 z-score: 347.7 E(): 6.2e-12%3B 52.9%25 identity in 68 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD31.15;product=hypothetical protein;protein_id=NP_628849.1;transl_table=11
NC_003888.3	RefSeq	gene	5117928	5118521	.	+	.	ID=gene4743;Dbxref=GeneID:1100132;Name=SCD31.16;gbkey=Gene;gene=SCD31.16;gene_biotype=protein_coding;gene_synonym=SCD31.16;locus_tag=SCO4691
NC_003888.3	RefSeq	CDS	5117928	5118521	.	+	0	ID=cds4643;Parent=gene4743;Dbxref=Genbank:NP_628850.1,GeneID:1100132;Name=NP_628850.1;Note=SCD31.16%2C possible membrane protein%2C len: 197 aa%3B similar to C-terminal region of TR:Q9WX28 (EMBL:AL079345) Streptomyces coelicolor membrane protein SCE68.03%2C 441 aa%3B fasta scores: opt: 495 z-score: 618.7 E(): 5e-27%3B 41.5%25 identity in 205 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD31.16;product=hypothetical protein;protein_id=NP_628850.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5118597	5118601	.	+	.	ID=id5901;gbkey=RBS
NC_003888.3	RefSeq	gene	5118613	5119260	.	+	.	ID=gene4744;Dbxref=GeneID:1100133;Name=SCD31.17;gbkey=Gene;gene=SCD31.17;gene_biotype=protein_coding;gene_synonym=SCD31.17;locus_tag=SCO4692
NC_003888.3	RefSeq	CDS	5118613	5119260	.	+	0	ID=cds4644;Parent=gene4744;Dbxref=Genbank:NP_628851.1,GeneID:1100133;Name=NP_628851.1;Note=SCD31.17%2C hypothetical protein%2C len: 215 aa%3B similar to TR:Q9F3G1 (EMBL:AL392175) Streptomyces coelicolor hypothetical protein 2SCD4.10c%2C 201 aa%3B fasta scores: opt: 776 Z-score: 867.6 E(): 1.1e-40%3B 59.000%25 identity in 200 aa overlap;gbkey=CDS;gene=SCD31.17;product=hypothetical protein;protein_id=NP_628851.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5119350	5119353	.	+	.	ID=id5902;gbkey=RBS
NC_003888.3	RefSeq	gene	5119357	5119617	.	+	.	ID=gene4745;Dbxref=GeneID:1100134;Name=SCD31.18;gbkey=Gene;gene=SCD31.18;gene_biotype=protein_coding;gene_synonym=SCD31.18;locus_tag=SCO4693
NC_003888.3	RefSeq	CDS	5119357	5119617	.	+	0	ID=cds4645;Parent=gene4745;Dbxref=Genbank:NP_628852.1,GeneID:1100134;Name=NP_628852.1;Note=SCD31.18%2C membrane protein%2C len: 86 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCD31.18;product=hypothetical protein;protein_id=NP_628852.1;transl_table=11
NC_003888.3	RefSeq	gene	5119650	5119892	.	+	.	ID=gene4746;Dbxref=GeneID:1100135;Name=SCD31.19;gbkey=Gene;gene=SCD31.19;gene_biotype=protein_coding;gene_synonym=SCD31.19;locus_tag=SCO4694
NC_003888.3	RefSeq	CDS	5119650	5119892	.	+	0	ID=cds4646;Parent=gene4746;Dbxref=Genbank:NP_628853.1,GeneID:1100135;Name=NP_628853.1;Note=SCD31.19%2C hypothetical protein%2C len: 80 aa%3B similar to part of TR:O54162 (EMBL:AL021411) Streptomyces coelicolor hypothetical 40.9 kD protein SC7H1.03c%2C 391 aa%3B fasta scores: opt: 301 z-score: 411.2 E(): 1.8e-15%3B 58.8%25 identity in 80 aa overlap;gbkey=CDS;gene=SCD31.19;product=hypothetical protein;protein_id=NP_628853.1;transl_table=11
NC_003888.3	RefSeq	gene	5119938	5120483	.	+	.	ID=gene4747;Dbxref=GeneID:1100136;Name=SCD31.20;gbkey=Gene;gene=SCD31.20;gene_biotype=protein_coding;gene_synonym=SCD31.20;locus_tag=SCO4695
NC_003888.3	RefSeq	CDS	5119938	5120483	.	+	0	ID=cds4647;Parent=gene4747;Dbxref=Genbank:NP_628854.1,GeneID:1100136;Name=NP_628854.1;Note=SCD31.20%2C hypothetical protein%2C len: 181 aa%3B similar to C-terminal part of many hypothetical proteins%2C e.g. TR:O54162 (EMBL:AL021411) Streptomyces coelicolor hypothetical 40.9 kD protein SC7H1.03c%2C 391 aa%3B fasta scores: opt: 594 z-score: 691.0 E(): 4.7e-31%3B 53.5%25 identity in 185 aa overlap;gbkey=CDS;gene=SCD31.20;product=hypothetical protein;protein_id=NP_628854.1;transl_table=11
NC_003888.3	RefSeq	gene	5120514	5120981	.	+	.	ID=gene4748;Dbxref=GeneID:1100137;Name=SCD31.21;gbkey=Gene;gene=SCD31.21;gene_biotype=protein_coding;gene_synonym=SCD31.21;locus_tag=SCO4696
NC_003888.3	RefSeq	CDS	5120514	5120981	.	+	0	ID=cds4648;Parent=gene4748;Dbxref=Genbank:NP_628855.1,GeneID:1100137;Name=NP_628855.1;Note=SCD31.21%2C unknown%2C len: 155 aa;gbkey=CDS;gene=SCD31.21;product=hypothetical protein;protein_id=NP_628855.1;transl_table=11
NC_003888.3	RefSeq	gene	5121109	5122923	.	+	.	ID=gene4749;Dbxref=GeneID:1100138;Name=SCD31.22;gbkey=Gene;gene=SCD31.22;gene_biotype=protein_coding;gene_synonym=SCD31.22;locus_tag=SCO4697
NC_003888.3	RefSeq	CDS	5121109	5122923	.	+	0	ID=cds4649;Parent=gene4749;Dbxref=Genbank:NP_628856.1,GeneID:1100138;Name=NP_628856.1;Note=SCD31.22%2C possible integral membrane protein%2C len: 604 aa%3B N-terminal region similar to TR:Q9XD98 (EMBL:AF106004) Streptomyces coelicolor hypothetical 27.5 kD protein%2C 249 aa%3B fasta scores: opt: 953 z-score: 1009.5 E(): 0%3B 58.7%25 identity in 235 aa overlap and C-terminal region highly similar to C-terminal region of TR:O86757 (EMBL:AL031035) Streptomyces coelicolor hypothetical 28.2 kD protein SC6A9.25%2C 254 aa%3B fasta scores: opt: 309 z-score: 332.3 E(): 4.4e-11%3B 92.0%25 identity in 50 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop)%2C a possible hydrophobic membrane spanning region and a possible coiled-coil region at aprox residues 170..210;gbkey=CDS;gene=SCD31.22;product=hypothetical protein;protein_id=NP_628856.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5122063	5122086	.	+	.	ID=id5903;Dbxref=GeneID:1100138;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD31.22
NC_003888.3	RefSeq	sequence_feature	5122785	5123855	.	+	.	ID=id5904;Note=insertion element IS1652;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	5122786	5122828	.	+	.	ID=id5905;Dbxref=GeneID:1100138;Note=32/43 bp inverted repeat 15099 CTAGTTGTGTTGTCCCGGGACGTTGGTGACACGCGTGCTGGG 15141;gbkey=repeat_region;gene=SCD31.22
NC_003888.3	RefSeq	gene	5122836	5123855	.	+	.	ID=gene4750;Dbxref=GeneID:1100139;Name=SCD31.23;gbkey=Gene;gene=SCD31.23;gene_biotype=protein_coding;gene_synonym=SCD31.23;locus_tag=SCO4698
NC_003888.3	RefSeq	CDS	5122836	5123855	.	+	0	ID=cds4650;Parent=gene4750;Dbxref=Genbank:NP_628857.1,GeneID:1100139;Name=NP_628857.1;Note=SCD31.23%2C probable insertion element IS1652 transposase%2C len: 339 aa%3B identical to TR:CAB71807 (EMBL:AL138662) Streptomyces coelicolor transposase SC8E4A.02%2C 339 aa and highly similar to various other Streptomyces coelicolor transposases;gbkey=CDS;gene=SCD31.23;product=IS1652 transposase;protein_id=NP_628857.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5123813	5123855	.	+	.	ID=id5906;Dbxref=GeneID:1100139;Note=32/43 bp inverted repeat 16126 ACCCGCCAGCCGCGGCACCAACCTCTCCGAACAACACATCTAG 16168;gbkey=repeat_region;gene=SCD31.23
NC_003888.3	RefSeq	gene	5123855	5126638	.	+	.	ID=gene4751;Dbxref=GeneID:1100140;Name=SCD31.24;gbkey=Gene;gene=SCD31.24;gene_biotype=protein_coding;gene_synonym=SCD31.24;locus_tag=SCO4699
NC_003888.3	RefSeq	CDS	5123855	5126638	.	+	0	ID=cds4651;Parent=gene4751;Dbxref=Genbank:NP_628858.1,GeneID:1100140;Name=NP_628858.1;Note=SCD31.24%2C possible Rhs protein%2C len: 927 aa%3B similar to C-terminal domain of SW:RHSB_ECOLI (EMBL:L02370) Escherichia coli RhsB protein precursor%2C 1411 aa%3B fasta scores: opt: 510 z-score: 568.8 E(): 3e-24%3B 26.4%25 identity in 954 aa overlap;gbkey=CDS;gene=SCD31.24;product=Rhs protein;protein_id=NP_628858.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5123906	5123953	.	+	.	ID=id5907;Dbxref=GeneID:1100140;Note=degenerate repeat unit GxxxRYxYDAxxxR;gbkey=repeat_region;gene=SCD31.24
NC_003888.3	RefSeq	repeat_region	5124161	5124205	.	+	.	ID=id5908;Dbxref=GeneID:1100140;Note=degenerate repeat unit GxxxRYxYDAxxxR;gbkey=repeat_region;gene=SCD31.24
NC_003888.3	RefSeq	repeat_region	5124974	5125015	.	+	.	ID=id5909;Dbxref=GeneID:1100140;Note=degenerate repeat unit GxxxRYxYDAxxxR;gbkey=repeat_region;gene=SCD31.24
NC_003888.3	RefSeq	gene	5126659	5127108	.	+	.	ID=gene4752;Dbxref=GeneID:1100141;Name=SCD31.25;gbkey=Gene;gene=SCD31.25;gene_biotype=protein_coding;gene_synonym=SCD31.25;locus_tag=SCO4700
NC_003888.3	RefSeq	CDS	5126659	5127108	.	+	0	ID=cds4652;Parent=gene4752;Dbxref=Genbank:NP_628859.1,GeneID:1100141;Name=NP_628859.1;Note=SCD31.25%2C unknown%2C len: 149 aa;gbkey=CDS;gene=SCD31.25;product=hypothetical protein;protein_id=NP_628859.1;transl_table=11
NC_003888.3	RefSeq	gene	5127609	5127917	.	+	.	ID=gene4753;Dbxref=GeneID:1100142;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=SCO4701
NC_003888.3	RefSeq	CDS	5127609	5127917	.	+	0	ID=cds4653;Parent=gene4753;Dbxref=Genbank:NP_628860.1,GeneID:1100142;Name=NP_628860.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=NP_628860.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5127621	5127908	.	+	.	ID=id5910;Dbxref=GeneID:1100142;Note=Pfam match to entry PF00338 Ribosomal_S10%2C Ribosomal protein S10p/S20e%2C score 221.30%2C E-value 1.4e-62;gbkey=misc_feature;gene=rpsJ
NC_003888.3	RefSeq	sequence_feature	5127693	5127740	.	+	.	ID=id5911;Dbxref=GeneID:1100142;Note=PS00361 Ribosomal protein S10 signature;gbkey=misc_feature;gene=rpsJ
NC_003888.3	RefSeq	gene	5127934	5128578	.	+	.	ID=gene4754;Dbxref=GeneID:1100143;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;gene_synonym=SCD31.27;locus_tag=SCO4702
NC_003888.3	RefSeq	CDS	5127934	5128578	.	+	0	ID=cds4654;Parent=gene4754;Dbxref=Genbank:NP_628861.1,GeneID:1100143;Name=NP_628861.1;Note=binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin;gbkey=CDS;gene=rplC;product=50S ribosomal protein L3;protein_id=NP_628861.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5127967	5128557	.	+	.	ID=id5912;Dbxref=GeneID:1100143;Note=Pfam match to entry PF00297 Ribosomal_L3%2C Ribosomal protein L3%2C score 280.20%2C E-value 2.6e-80;gbkey=misc_feature;gene=rplC
NC_003888.3	RefSeq	sequence_feature	5128246	5128317	.	+	.	ID=id5913;Dbxref=GeneID:1100143;Note=PS00474 Ribosomal protein L3 signature;gbkey=misc_feature;gene=rplC
NC_003888.3	RefSeq	ribosome_entry_site	5128577	5128580	.	+	.	ID=id5914;gbkey=RBS
NC_003888.3	RefSeq	gene	5128587	5129246	.	+	.	ID=gene4755;Dbxref=GeneID:1100144;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;gene_synonym=SCD31.28;locus_tag=SCO4703
NC_003888.3	RefSeq	CDS	5128587	5129246	.	+	0	ID=cds4655;Parent=gene4755;Dbxref=Genbank:NP_628862.1,GeneID:1100144;Name=NP_628862.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=NP_628862.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5128632	5129207	.	+	.	ID=id5915;Dbxref=GeneID:1100144;Note=Pfam match to entry PF00573 Ribosomal_L4%2C Ribosomal protein L4/L1 family%2C score 219.20%2C E-value 6e-62;gbkey=misc_feature;gene=rplD
NC_003888.3	RefSeq	ribosome_entry_site	5129233	5129236	.	+	.	ID=id5916;Dbxref=GeneID:1100144;gbkey=RBS;gene=rplD
NC_003888.3	RefSeq	gene	5129246	5129665	.	+	.	ID=gene4756;Dbxref=GeneID:1100145;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;gene_synonym=SCD31.29;locus_tag=SCO4704
NC_003888.3	RefSeq	CDS	5129246	5129665	.	+	0	ID=cds4656;Parent=gene4756;Dbxref=Genbank:NP_628863.1,GeneID:1100145;Name=NP_628863.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=NP_628863.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5129384	5129656	.	+	.	ID=id5917;Dbxref=GeneID:1100145;Note=Pfam match to entry PF00276 Ribosomal_L23%2C Ribosomal protein L23%2C score 117.70%2C E-value 9.2e-34;gbkey=misc_feature;gene=rplW
NC_003888.3	RefSeq	sequence_feature	5129600	5129647	.	+	.	ID=id5918;Dbxref=GeneID:1100145;Note=PS00050 Ribosomal protein L23 signature;gbkey=misc_feature;gene=rplW
NC_003888.3	RefSeq	ribosome_entry_site	5129694	5129698	.	+	.	ID=id5919;gbkey=RBS
NC_003888.3	RefSeq	gene	5129706	5130542	.	+	.	ID=gene4757;Dbxref=GeneID:1100146;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;gene_synonym=SCD31.30;locus_tag=SCO4705
NC_003888.3	RefSeq	CDS	5129706	5130542	.	+	0	ID=cds4657;Parent=gene4757;Dbxref=Genbank:NP_628864.1,GeneID:1100146;Name=NP_628864.1;Note=one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation;gbkey=CDS;gene=rplB;product=50S ribosomal protein L2;protein_id=NP_628864.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5129829	5130527	.	+	.	ID=id5920;Dbxref=GeneID:1100146;Note=Pfam match to entry PF00181 Ribosomal_L2%2C Ribosomal Proteins L2%2C score 412.90%2C E-value 3e-120;gbkey=misc_feature;gene=rplB
NC_003888.3	RefSeq	sequence_feature	5130360	5130395	.	+	.	ID=id5921;Dbxref=GeneID:1100146;Note=PS00467 Ribosomal protein L2 signature;gbkey=misc_feature;gene=rplB
NC_003888.3	RefSeq	gene	5130555	5130836	.	+	.	ID=gene4758;Dbxref=GeneID:1100147;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;gene_synonym=SCD31.31;locus_tag=SCO4706
NC_003888.3	RefSeq	CDS	5130555	5130836	.	+	0	ID=cds4658;Parent=gene4758;Dbxref=Genbank:NP_628865.1,GeneID:1100147;Name=NP_628865.1;Note=protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA;gbkey=CDS;gene=rpsS;product=30S ribosomal protein S19;protein_id=NP_628865.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5130561	5130803	.	+	.	ID=id5922;Dbxref=GeneID:1100147;Note=Pfam match to entry PF00203 Ribosomal_S19%2C Ribosomal protein S19%2C score 179.50%2C E-value 1.9e-51;gbkey=misc_feature;gene=rpsS
NC_003888.3	RefSeq	sequence_feature	5130711	5130785	.	+	.	ID=id5923;Dbxref=GeneID:1100147;Note=PS00323 Ribosomal protein S19 signature;gbkey=misc_feature;gene=rpsS
NC_003888.3	RefSeq	gene	5130849	5131226	.	+	.	ID=gene4759;Dbxref=GeneID:1100148;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;gene_synonym=SCD31.32;locus_tag=SCO4707
NC_003888.3	RefSeq	CDS	5130849	5131226	.	+	0	ID=cds4659;Parent=gene4759;Dbxref=Genbank:NP_628866.1,GeneID:1100148;Name=NP_628866.1;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;gbkey=CDS;gene=rplV;product=50S ribosomal protein L22;protein_id=NP_628866.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5130891	5131208	.	+	.	ID=id5924;Dbxref=GeneID:1100148;Note=Pfam match to entry PF00237 Ribosomal_L22%2C Ribosomal protein L22%2C score 190.10%2C E-value 3.4e-53;gbkey=misc_feature;gene=rplV
NC_003888.3	RefSeq	sequence_feature	5131128	5131202	.	+	.	ID=id5925;Dbxref=GeneID:1100148;Note=PS00464 Ribosomal protein L22 signature;gbkey=misc_feature;gene=rplV
NC_003888.3	RefSeq	gene	5131226	5132059	.	+	.	ID=gene4760;Dbxref=GeneID:1100149;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;gene_synonym=SCD31.33;locus_tag=SCO4708
NC_003888.3	RefSeq	CDS	5131226	5132059	.	+	0	ID=cds4660;Parent=gene4760;Dbxref=Genbank:NP_628867.1,GeneID:1100149;Name=NP_628867.1;Note=forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation;gbkey=CDS;gene=rpsC;product=30S ribosomal protein S3;protein_id=NP_628867.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5131226	5131408	.	+	.	ID=id5926;Dbxref=GeneID:1100149;Note=Pfam match to entry PF00417 Ribosomal_S3_N%2C Ribosomal protein S3%2C N-terminal domain.%2C score 89.90%2C E-value 8.7e-28;gbkey=misc_feature;gene=rpsC
NC_003888.3	RefSeq	sequence_feature	5131415	5131558	.	+	.	ID=id5927;Dbxref=GeneID:1100149;Note=Pfam match to entry PF00013 KH-domain%2C KH domain%2C score 23.30%2C E-value 1.2e-05;gbkey=misc_feature;gene=rpsC
NC_003888.3	RefSeq	sequence_feature	5131418	5131465	.	+	.	ID=id5928;Dbxref=GeneID:1100149;Note=PS00050 Ribosomal protein L23 signature;gbkey=misc_feature;gene=rpsC
NC_003888.3	RefSeq	sequence_feature	5131577	5131828	.	+	.	ID=id5929;Dbxref=GeneID:1100149;Note=Pfam match to entry PF00189 Ribosomal_S3_C%2C Ribosomal protein S3%2C C-terminal domain.%2C score 152.70%2C E-value 7.1e-47;gbkey=misc_feature;gene=rpsC
NC_003888.3	RefSeq	sequence_feature	5131709	5131813	.	+	.	ID=id5930;Dbxref=GeneID:1100149;Note=PS00548 Ribosomal protein S3 signature;gbkey=misc_feature;gene=rpsC
NC_003888.3	RefSeq	ribosome_entry_site	5132050	5132054	.	+	.	ID=id5931;Dbxref=GeneID:1100149;gbkey=RBS;gene=rpsC
NC_003888.3	RefSeq	gene	5132065	5132484	.	+	.	ID=gene4761;Dbxref=GeneID:1100150;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;gene_synonym=SCD31.34;locus_tag=SCO4709
NC_003888.3	RefSeq	CDS	5132065	5132484	.	+	0	ID=cds4661;Parent=gene4761;Dbxref=Genbank:NP_628868.1,GeneID:1100150;Name=NP_628868.1;Note=located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e;gbkey=CDS;gene=rplP;product=50S ribosomal protein L16;protein_id=NP_628868.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5132065	5132460	.	+	.	ID=id5932;Dbxref=GeneID:1100150;Note=Pfam match to entry PF00252 Ribosomal_L16%2C Ribosomal protein L16%2C score 245.50%2C E-value 7.6e-71;gbkey=misc_feature;gene=rplP
NC_003888.3	RefSeq	sequence_feature	5132308	5132343	.	+	.	ID=id5933;Dbxref=GeneID:1100150;Note=PS00701 Ribosomal protein L16 signature 2;gbkey=misc_feature;gene=rplP
NC_003888.3	RefSeq	gene	5132484	5132708	.	+	.	ID=gene4762;Dbxref=GeneID:1100151;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;gene_synonym=rpmC,SCD31.35;locus_tag=SCO4710
NC_003888.3	RefSeq	CDS	5132484	5132708	.	+	0	ID=cds4662;Parent=gene4762;Dbxref=Genbank:NP_628869.1,GeneID:1100151;Name=NP_628869.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;gene=rpmC;product=50S ribosomal protein L29;protein_id=NP_628869.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5132502	5132690	.	+	.	ID=id5934;Dbxref=GeneID:1100151;Note=Pfam match to entry PF00831 Ribosomal_L29%2C Ribosomal L29 protein%2C score 106.60%2C E-value 4.7e-28;gbkey=misc_feature;gene=rpmC
NC_003888.3	RefSeq	sequence_feature	5132529	5132603	.	+	.	ID=id5935;Dbxref=GeneID:1100151;Note=PS00323 Ribosomal protein S19 signature;gbkey=misc_feature;gene=rpmC
NC_003888.3	RefSeq	ribosome_entry_site	5132696	5132701	.	+	.	ID=id5936;Dbxref=GeneID:1100151;gbkey=RBS;gene=rpmC
NC_003888.3	RefSeq	gene	5132708	5132995	.	+	.	ID=gene4763;Dbxref=GeneID:1100152;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;gene_synonym=SCD31.36;locus_tag=SCO4711
NC_003888.3	RefSeq	CDS	5132708	5132995	.	+	0	ID=cds4663;Parent=gene4763;Dbxref=Genbank:NP_628870.1,GeneID:1100152;Name=NP_628870.1;Note=primary binding protein%3B helps mediate assembly%3B involved in translation fidelity;gbkey=CDS;gene=rpsQ;product=30S ribosomal protein S17;protein_id=NP_628870.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5132771	5132977	.	+	.	ID=id5937;Dbxref=GeneID:1100152;Note=Pfam match to entry PF00366 Ribosomal_S17%2C Ribosomal protein S17%2C score 127.50%2C E-value 1.2e-36;gbkey=misc_feature;gene=rpsQ
NC_003888.3	RefSeq	sequence_feature	5132909	5132947	.	+	.	ID=id5938;Dbxref=GeneID:1100152;Note=PS00056 Ribosomal protein S17 signature;gbkey=misc_feature;gene=rpsQ
NC_003888.3	RefSeq	ribosome_entry_site	5133093	5133097	.	+	.	ID=id5939;gbkey=RBS
NC_003888.3	RefSeq	gene	5133103	5133471	.	+	.	ID=gene4764;Dbxref=GeneID:1100153;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;gene_synonym=SCD31.37;locus_tag=SCO4712
NC_003888.3	RefSeq	CDS	5133103	5133471	.	+	0	ID=cds4664;Parent=gene4764;Dbxref=Genbank:NP_628871.1,GeneID:1100153;Name=NP_628871.1;Note=binds to the 23S rRNA between the centers for peptidyl transferase and GTPase;gbkey=CDS;gene=rplN;product=50S ribosomal protein L14;protein_id=NP_628871.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5133103	5133468	.	+	.	ID=id5940;Dbxref=GeneID:1100153;Note=Pfam match to entry PF00238 Ribosomal_L14%2C Ribosomal protein L14%2C score 263.20%2C E-value 3.5e-75;gbkey=misc_feature;gene=rplN
NC_003888.3	RefSeq	sequence_feature	5133280	5133360	.	+	.	ID=id5941;Dbxref=GeneID:1100153;Note=PS00049 Ribosomal protein L14 signature;gbkey=misc_feature;gene=rplN
NC_003888.3	RefSeq	ribosome_entry_site	5133459	5133463	.	+	.	ID=id5942;Dbxref=GeneID:1100153;gbkey=RBS;gene=rplN
NC_003888.3	RefSeq	gene	5133474	5133797	.	+	.	ID=gene4765;Dbxref=GeneID:1100154;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;gene_synonym=SCD31.38;locus_tag=SCO4713
NC_003888.3	RefSeq	CDS	5133474	5133797	.	+	0	ID=cds4665;Parent=gene4765;Dbxref=Genbank:NP_628872.1,GeneID:1100154;Name=NP_628872.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=NP_628872.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5133480	5133659	.	+	.	ID=id5943;Dbxref=GeneID:1100154;Note=Pfam match to entry PF00467 Ribosomal_L24%2C KOW motif%2C score 94.20%2C E-value 2.7e-24;gbkey=misc_feature;gene=rplX
NC_003888.3	RefSeq	sequence_feature	5133489	5133542	.	+	.	ID=id5944;Dbxref=GeneID:1100154;Note=PS01108 Ribosomal protein L24 signature;gbkey=misc_feature;gene=rplX
NC_003888.3	RefSeq	ribosome_entry_site	5133786	5133790	.	+	.	ID=id5945;Dbxref=GeneID:1100154;gbkey=RBS;gene=rplX
NC_003888.3	RefSeq	gene	5133797	5134354	.	+	.	ID=gene4766;Dbxref=GeneID:1100155;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;gene_synonym=SCD31.39;locus_tag=SCO4714
NC_003888.3	RefSeq	CDS	5133797	5134354	.	+	0	ID=cds4666;Parent=gene4766;Dbxref=Genbank:NP_628873.1,GeneID:1100155;Name=NP_628873.1;Note=part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13;gbkey=CDS;gene=rplE;product=50S ribosomal protein L5;protein_id=NP_628873.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5133881	5134051	.	+	.	ID=id5946;Dbxref=GeneID:1100155;Note=Pfam match to entry PF00281 Ribosomal_L5%2C Ribosomal protein L5%2C score 117.00%2C E-value 3.4e-31;gbkey=misc_feature;gene=rplE
NC_003888.3	RefSeq	sequence_feature	5133980	5134030	.	+	.	ID=id5947;Dbxref=GeneID:1100155;Note=PS00358 Ribosomal protein L5 signature;gbkey=misc_feature;gene=rplE
NC_003888.3	RefSeq	sequence_feature	5134061	5134345	.	+	.	ID=id5948;Dbxref=GeneID:1100155;Note=Pfam match to entry PF00673 Ribosomal_L5_C%2C ribosomal L5P family C-terminus%2C score 194.30%2C E-value 2e-54;gbkey=misc_feature;gene=rplE
NC_003888.3	RefSeq	ribosome_entry_site	5134345	5134349	.	+	.	ID=id5949;Dbxref=GeneID:1100155;gbkey=RBS;gene=rplE
NC_003888.3	RefSeq	gene	5134360	5134545	.	+	.	ID=gene4767;Dbxref=GeneID:1100156;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;gene_synonym=SCD31.40;locus_tag=SCO4715
NC_003888.3	RefSeq	CDS	5134360	5134545	.	+	0	ID=cds4667;Parent=gene4767;Dbxref=Genbank:NP_628874.1,GeneID:1100156;Name=NP_628874.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group appear to contain the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=NP_628874.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5134360	5134542	.	+	.	ID=id5950;Dbxref=GeneID:1100156;Note=Pfam match to entry PF00253 Ribosomal_S14%2C Ribosomal protein S14p/S29e%2C score 107.50%2C E-value 6.2e-32;gbkey=misc_feature;gene=rpsN
NC_003888.3	RefSeq	sequence_feature	5134426	5134494	.	+	.	ID=id5951;Dbxref=GeneID:1100156;Note=PS00527 Ribosomal protein S14 signature;gbkey=misc_feature;gene=rpsN
NC_003888.3	RefSeq	ribosome_entry_site	5134745	5134749	.	+	.	ID=id5952;gbkey=RBS
NC_003888.3	RefSeq	gene	5134757	5135155	.	+	.	ID=gene4768;Dbxref=GeneID:1100157;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;gene_synonym=SCD31.42;locus_tag=SCO4716
NC_003888.3	RefSeq	CDS	5134757	5135155	.	+	0	ID=cds4668;Parent=gene4768;Dbxref=Genbank:NP_628875.1,GeneID:1100157;Name=NP_628875.1;Note=binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit;gbkey=CDS;gene=rpsH;product=30S ribosomal protein S8;protein_id=NP_628875.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5134769	5135152	.	+	.	ID=id5953;Dbxref=GeneID:1100157;Note=Pfam match to entry PF00410 Ribosomal_S8%2C Ribosomal protein S8%2C score 238.30%2C E-value 4e-72;gbkey=misc_feature;gene=rpsH
NC_003888.3	RefSeq	sequence_feature	5134790	5139438	.	+	.	ID=id5954;Note=previously sequenced fragment (EMBL:X83011);gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5135167	5135172	.	+	.	ID=id5955;gbkey=RBS
NC_003888.3	RefSeq	gene	5135180	5135719	.	+	.	ID=gene4769;Dbxref=GeneID:1100158;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;gene_synonym=SCD31.42;locus_tag=SCO4717
NC_003888.3	RefSeq	CDS	5135180	5135719	.	+	0	ID=cds4669;Parent=gene4769;Dbxref=Genbank:NP_628876.1,GeneID:1100158;Name=NP_628876.1;Note=ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7/L12 stalk and the central protuberance;gbkey=CDS;gene=rplF;product=50S ribosomal protein L6;protein_id=NP_628876.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5135210	5135716	.	+	.	ID=id5956;Dbxref=GeneID:1100158;Note=Pfam match to entry PF00347 Ribosomal_L6%2C Ribosomal protein L6%2C score 327.80%2C E-value 1.2e-94;gbkey=misc_feature;gene=rplF
NC_003888.3	RefSeq	sequence_feature	5135642	5135668	.	+	.	ID=id5957;Dbxref=GeneID:1100158;Note=PS00525 Ribosomal protein L6 signature 1;gbkey=misc_feature;gene=rplF
NC_003888.3	RefSeq	gene	5135723	5136106	.	+	.	ID=gene4770;Dbxref=GeneID:1100159;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;gene_synonym=SCD31.43;locus_tag=SCO4718
NC_003888.3	RefSeq	CDS	5135723	5136106	.	+	0	ID=cds4670;Parent=gene4770;Dbxref=Genbank:NP_628877.1,GeneID:1100159;Name=NP_628877.1;Note=binds 5S rRNA along with protein L5 and L25;gbkey=CDS;gene=rplR;product=50S ribosomal protein L18;protein_id=NP_628877.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5135759	5136103	.	+	.	ID=id5958;Dbxref=GeneID:1100159;Note=Pfam match to entry PF00861 Ribosomal_L18p%2C Ribosomal L18p/L5e family%2C score 204.90%2C E-value 1.3e-57;gbkey=misc_feature;gene=rplR
NC_003888.3	RefSeq	sequence_feature	5135798	5135848	.	+	.	ID=id5959;Dbxref=GeneID:1100159;Note=PS00358 Ribosomal protein L5 signature;gbkey=misc_feature;gene=rplR
NC_003888.3	RefSeq	ribosome_entry_site	5136137	5136141	.	+	.	ID=id5960;gbkey=RBS
NC_003888.3	RefSeq	gene	5136150	5136755	.	+	.	ID=gene4771;Dbxref=GeneID:1100160;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;gene_synonym=SCD31.44;locus_tag=SCO4719
NC_003888.3	RefSeq	CDS	5136150	5136755	.	+	0	ID=cds4671;Parent=gene4771;Dbxref=Genbank:NP_628878.1,GeneID:1100160;Name=NP_628878.1;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance;gbkey=CDS;gene=rpsE;product=30S ribosomal protein S5;protein_id=NP_628878.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5136261	5136647	.	+	.	ID=id5961;Dbxref=GeneID:1100160;Note=Pfam match to entry PF00333 Ribosomal_S5%2C Ribosomal protein S5%2C score 262.80%2C E-value 4.5e-75;gbkey=misc_feature;gene=rpsE
NC_003888.3	RefSeq	sequence_feature	5136300	5136398	.	+	.	ID=id5962;Dbxref=GeneID:1100160;Note=PS00585 Ribosomal protein S5 signature;gbkey=misc_feature;gene=rpsE
NC_003888.3	RefSeq	gene	5136758	5136940	.	+	.	ID=gene4772;Dbxref=GeneID:1100161;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;gene_synonym=SCD31.45;locus_tag=SCO4720
NC_003888.3	RefSeq	CDS	5136758	5136940	.	+	0	ID=cds4672;Parent=gene4772;Dbxref=Genbank:NP_628879.1,GeneID:1100161;Name=NP_628879.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=NP_628879.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5136761	5136919	.	+	.	ID=id5963;Dbxref=GeneID:1100161;Note=Pfam match to entry PF00327 Ribosomal_L30%2C Ribosomal protein L30p/L7e%2C score 92.60%2C E-value 1.3e-26;gbkey=misc_feature;gene=rpmD
NC_003888.3	RefSeq	sequence_feature	5136821	5136919	.	+	.	ID=id5964;Dbxref=GeneID:1100161;Note=PS00634 Ribosomal protein L30 signature;gbkey=misc_feature;gene=rpmD
NC_003888.3	RefSeq	ribosome_entry_site	5136927	5136932	.	+	.	ID=id5965;Dbxref=GeneID:1100161;gbkey=RBS;gene=rpmD
NC_003888.3	RefSeq	gene	5136943	5137398	.	+	.	ID=gene4773;Dbxref=GeneID:1100162;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;gene_synonym=SCD31.46;locus_tag=SCO4721
NC_003888.3	RefSeq	CDS	5136943	5137398	.	+	0	ID=cds4673;Parent=gene4773;Dbxref=Genbank:NP_628880.1,GeneID:1100162;Name=NP_628880.1;Note=late assembly protein;gbkey=CDS;gene=rplO;product=50S ribosomal protein L15;protein_id=NP_628880.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5136961	5137263	.	+	.	ID=id5966;Dbxref=GeneID:1100162;Note=Pfam match to entry PF01305 Ribosomal_L15%2C Ribosomal protein L15 amino terminal region%2C score 172.10%2C E-value 9e-48;gbkey=misc_feature;gene=rplO
NC_003888.3	RefSeq	sequence_feature	5137024	5137047	.	+	.	ID=id5967;Dbxref=GeneID:1100162;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=rplO
NC_003888.3	RefSeq	sequence_feature	5137282	5137377	.	+	.	ID=id5968;Dbxref=GeneID:1100162;Note=Pfam match to entry PF00256 L15%2C Ribosomal protein L15%2C score 49.00%2C E-value 1.8e-16;gbkey=misc_feature;gene=rplO
NC_003888.3	RefSeq	sequence_feature	5137282	5137374	.	+	.	ID=id5969;Dbxref=GeneID:1100162;Note=PS00475 Ribosomal protein L15 signature;gbkey=misc_feature;gene=rplO
NC_003888.3	RefSeq	ribosome_entry_site	5137645	5137650	.	+	.	ID=id5970;gbkey=RBS
NC_003888.3	RefSeq	gene	5137655	5138968	.	+	.	ID=gene4774;Dbxref=GeneID:1100163;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;gene_synonym=SCD31.47;locus_tag=SCO4722
NC_003888.3	RefSeq	CDS	5137655	5138968	.	+	0	ID=cds4674;Parent=gene4774;Dbxref=Genbank:NP_628881.1,GeneID:1100163;Name=NP_628881.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=NP_628881.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5137871	5138920	.	+	.	ID=id5971;Dbxref=GeneID:1100163;Note=Pfam match to entry PF00344 secY%2C eubacterial secY protein%2C score 698.20%2C E-value 4e-206;gbkey=misc_feature;gene=secY
NC_003888.3	RefSeq	sequence_feature	5137871	5137930	.	+	.	ID=id5972;Dbxref=GeneID:1100163;Note=PS00755 Protein secY signature 1;gbkey=misc_feature;gene=secY
NC_003888.3	RefSeq	sequence_feature	5138180	5138236	.	+	.	ID=id5973;Dbxref=GeneID:1100163;Note=PS00756 Protein secY signature 2;gbkey=misc_feature;gene=secY
NC_003888.3	RefSeq	gene	5138968	5139621	.	+	.	ID=gene4775;Dbxref=GeneID:1100164;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;gene_synonym=SCD31.48;locus_tag=SCO4723
NC_003888.3	RefSeq	CDS	5138968	5139621	.	+	0	ID=cds4675;Parent=gene4775;Dbxref=Genbank:NP_733646.1,GeneID:1100164;Name=NP_733646.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=NP_733646.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5138980	5139432	.	+	.	ID=id5974;Dbxref=GeneID:1100164;Note=Pfam match to entry PF00406 adenylatekinase%2C Adenylate kinase%2C score 331.10%2C E-value 1.2e-95;gbkey=misc_feature;gene=adk
NC_003888.3	RefSeq	sequence_feature	5139208	5139243	.	+	.	ID=id5975;Dbxref=GeneID:1100164;Note=PS00113 Adenylate kinase signature;gbkey=misc_feature;gene=adk
NC_003888.3	RefSeq	sequence_feature	5139336	5140945	.	+	.	ID=id5976;Note=98.4%25 match to SCSECYDNA X83011 S.coelicolor secY lo cus DNA from 4547 to 6154;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5139337	5139543	.	+	.	ID=id5977;Dbxref=GeneID:1100164;Note=Pfam match to entry PF00406 adenylatekinase%2C Adenyla te kinases%2C score 136.80%2C E-value 3.2e-37;gbkey=misc_feature;gene=adk
NC_003888.3	RefSeq	ribosome_entry_site	5139758	5139761	.	+	.	ID=id5978;Note=possible RBS upstream of map;gbkey=RBS
NC_003888.3	RefSeq	gene	5139773	5140609	.	+	.	ID=gene4776;Dbxref=GeneID:1100165;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;gene_synonym=map;locus_tag=SCO4724
NC_003888.3	RefSeq	CDS	5139773	5140609	.	+	0	ID=cds4676;Parent=gene4776;Dbxref=Genbank:NP_628882.1,GeneID:1100165;Name=NP_628882.1;Note=SC6G4.02%2C map%2C methionine aminopeptidase%2C len: 278 aa%3B identical to TR:O54208 (EMBL:X83011) methionine aminopeptidase (278 aa) and highly similar to many e.g.AMPM_BACSU methionine aminopeptidase (EC 3.4.11.18) (248 aa)%2C fasta scores%3B opt: 546 z-score: 922.2 E(): 0%2C 44.5%25 identity in 256 aa overlap. Also similar to S. coelicolor map2 (E(): 3.2e-3 3%2C 46.8%25 identity in 267 aa overlap). Contains PS00680 Meth ionine aminopeptidase subfamily 1 signature and Pfam match to entry PF00557 pep_M24%2C metallopeptidase family M24%2C scor e 194.80%2C E-value 1.4e-54;gbkey=CDS;gene=map;product=methionine aminopeptidase;protein_id=NP_628882.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5139779	5140531	.	+	.	ID=id5979;Dbxref=GeneID:1100165;Note=Pfam match to entry PF00557 pep_M24%2C metallopeptidas e family M24%2C score 194.80%2C E-value 1.4e-54;gbkey=misc_feature;gene=map
NC_003888.3	RefSeq	sequence_feature	5140289	5140345	.	+	.	ID=id5980;Dbxref=GeneID:1100165;Note=PS00680 Methionine aminopeptidase subfamily 1 signat ure;gbkey=misc_feature;gene=map
NC_003888.3	RefSeq	ribosome_entry_site	5140740	5140743	.	+	.	ID=id5981;Note=possible RBS upstream of infA;gbkey=RBS
NC_003888.3	RefSeq	gene	5140751	5140972	.	+	.	ID=gene4777;Dbxref=GeneID:1100166;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;gene_synonym=SC6G4.03;locus_tag=SCO4725
NC_003888.3	RefSeq	CDS	5140751	5140972	.	+	0	ID=cds4677;Parent=gene4777;Dbxref=Genbank:NP_628883.1,GeneID:1100166;Name=NP_628883.1;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=NP_628883.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5140757	5140969	.	+	.	ID=id5982;Dbxref=GeneID:1100166;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding motif %2C score 54.10%2C E-value 3.1e-12;gbkey=misc_feature;gene=infA
NC_003888.3	RefSeq	ribosome_entry_site	5141025	5141028	.	+	.	ID=id5983;Note=possible RBS upstream of rpmJ;gbkey=RBS
NC_003888.3	RefSeq	gene	5141041	5141154	.	+	.	ID=gene4778;Dbxref=GeneID:1100167;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;gene_synonym=SC6G4.04;locus_tag=SCO4726
NC_003888.3	RefSeq	CDS	5141041	5141154	.	+	0	ID=cds4678;Parent=gene4778;Dbxref=Genbank:NP_628884.1,GeneID:1100167;Name=NP_628884.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=NP_628884.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5141041	5141151	.	+	.	ID=id5984;Dbxref=GeneID:1100167;Note=Pfam match to entry PF00444 L36%2C Ribosomal protein L 36%2C score 70.40%2C E-value 3.1e-22;gbkey=misc_feature;gene=rpmJ
NC_003888.3	RefSeq	sequence_feature	5141071	5141148	.	+	.	ID=id5985;Dbxref=GeneID:1100167;Note=PS00828 Ribosomal protein L36 signature;gbkey=misc_feature;gene=rpmJ
NC_003888.3	RefSeq	ribosome_entry_site	5141332	5141335	.	+	.	ID=id5986;Note=possible RBS upstream of rpsM;gbkey=RBS
NC_003888.3	RefSeq	gene	5141343	5141723	.	+	.	ID=gene4779;Dbxref=GeneID:1100168;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;gene_synonym=SC6G4.05;locus_tag=SCO4727
NC_003888.3	RefSeq	CDS	5141343	5141723	.	+	0	ID=cds4679;Parent=gene4779;Dbxref=Genbank:NP_628885.1,GeneID:1100168;Name=NP_628885.1;Note=located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA;gbkey=CDS;gene=rpsM;product=30S ribosomal protein S13;protein_id=NP_628885.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5141349	5141669	.	+	.	ID=id5987;Dbxref=GeneID:1100168;Note=Pfam match to entry PF00416 S13%2C Ribosomal protein S 13%2C score 186.70%2C E-value 3.8e-52;gbkey=misc_feature;gene=rpsM
NC_003888.3	RefSeq	sequence_feature	5141604	5141645	.	+	.	ID=id5988;Dbxref=GeneID:1100168;Note=PS00646 Ribosomal protein S13 signature;gbkey=misc_feature;gene=rpsM
NC_003888.3	RefSeq	ribosome_entry_site	5141780	5141784	.	+	.	ID=id5989;Note=possible RBS upstream of rpsK;gbkey=RBS
NC_003888.3	RefSeq	gene	5141791	5142195	.	+	.	ID=gene4780;Dbxref=GeneID:1100169;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;gene_synonym=rpsK,SC6G4.06;locus_tag=SCO4728
NC_003888.3	RefSeq	CDS	5141791	5142195	.	+	0	ID=cds4680;Parent=gene4780;Dbxref=Genbank:NP_628886.1,GeneID:1100169;Name=NP_628886.1;Note=located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3;gbkey=CDS;gene=rpsK;product=30S ribosomal protein S11;protein_id=NP_628886.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5141860	5142189	.	+	.	ID=id5990;Dbxref=GeneID:1100169;Note=Pfam match to entry PF00411 S11%2C Ribosomal protein S 11%2C score 247.00%2C E-value 5.7e-76;gbkey=misc_feature;gene=rpsK
NC_003888.3	RefSeq	sequence_feature	5142094	5142162	.	+	.	ID=id5991;Dbxref=GeneID:1100169;Note=PS00054 Ribosomal protein S11 signature;gbkey=misc_feature;gene=rpsK
NC_003888.3	RefSeq	sequence_feature	5142103	5143508	.	+	.	ID=id5992;Note=98.2%25 match to SCRPOA X92107 S.coelicolor rpoA and r psK genes from 1 to 1401;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5142315	5142319	.	+	.	ID=id5993;Note=possible RBS upstream of rpoA;gbkey=RBS
NC_003888.3	RefSeq	gene	5142327	5143349	.	+	.	ID=gene4781;Dbxref=GeneID:1100170;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;gene_synonym=rpoA,SC6G4.07;locus_tag=SCO4729
NC_003888.3	RefSeq	CDS	5142327	5143349	.	+	0	ID=cds4681;Parent=gene4781;Dbxref=Genbank:NP_628887.1,GeneID:1100170;Name=NP_628887.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;gene=rpoA;product=DNA-directed RNA polymerase subunit alpha;protein_id=NP_628887.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5142945	5142968	.	+	.	ID=id5994;Dbxref=GeneID:1100170;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=rpoA
NC_003888.3	RefSeq	ribosome_entry_site	5143532	5143536	.	+	.	ID=id5995;Note=possible RBS upstream of rplQ;gbkey=RBS
NC_003888.3	RefSeq	gene	5143544	5144050	.	+	.	ID=gene4782;Dbxref=GeneID:1100171;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;gene_synonym=SC6G4.08;locus_tag=SCO4730
NC_003888.3	RefSeq	CDS	5143544	5144050	.	+	0	ID=cds4682;Parent=gene4782;Dbxref=Genbank:NP_628888.1,GeneID:1100171;Name=NP_628888.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=NP_628888.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5144178	5144181	.	+	.	ID=id5996;Note=possible RBS upstream of truA;gbkey=RBS
NC_003888.3	RefSeq	gene	5144190	5145044	.	+	.	ID=gene4783;Dbxref=GeneID:1100172;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=SCO4731
NC_003888.3	RefSeq	CDS	5144190	5145044	.	+	0	ID=cds4683;Parent=gene4783;Dbxref=Genbank:NP_628889.1,GeneID:1100172;Name=NP_628889.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=NP_628889.1;transl_table=11
NC_003888.3	RefSeq	gene	5145064	5145963	.	-	.	ID=gene4784;Dbxref=GeneID:1100173;Name=SC6G4.10c;gbkey=Gene;gene=SC6G4.10c;gene_biotype=protein_coding;gene_synonym=SC6G4.10c;locus_tag=SCO4732
NC_003888.3	RefSeq	CDS	5145064	5145963	.	-	0	ID=cds4684;Parent=gene4784;Dbxref=Genbank:NP_628890.1,GeneID:1100173;Name=NP_628890.1;Note=SC6G4.10c%2C membrane protein%2C len: 299 aa%3B contains possible transmembrane domain near N-terminus;gbkey=CDS;gene=SC6G4.10c;product=hypothetical protein;protein_id=NP_628890.1;transl_table=11
NC_003888.3	RefSeq	gene	5146008	5147243	.	+	.	ID=gene4785;Dbxref=GeneID:1100174;Name=SC6G4.11;gbkey=Gene;gene=SC6G4.11;gene_biotype=protein_coding;gene_synonym=SC6G4.11;locus_tag=SCO4733
NC_003888.3	RefSeq	CDS	5146008	5147243	.	+	0	ID=cds4685;Parent=gene4785;Dbxref=Genbank:NP_628891.1,GeneID:1100174;Name=NP_628891.1;Note=SC6G4.11%2C probable integral membrane protein%2C len: 4 11 aa%3B some similarity to hypothetical proteins from M. tuberculosis and M. leprae e.g. TR:P71970 (EMBL:) MTCY441.42 ( Rv2673) (433 aa)%2C fasta scores%3B opt: 383 z-score: 365.0 E() : 4.6e-13%2C 29.6%25 identity in 422 aa overlap;gbkey=CDS;gene=SC6G4.11;product=hypothetical protein;protein_id=NP_628891.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5147067	5148805	.	+	.	ID=id5997;Note=100%25 match to SC43429 U43429 Streptomyces coelicolor ribosomal protein L13 (rplM) and S9 (rpsI) genes from 1 to 1739;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5147451	5147894	.	+	.	ID=gene4786;Dbxref=GeneID:1100175;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=SCO4734
NC_003888.3	RefSeq	CDS	5147451	5147894	.	+	0	ID=cds4686;Parent=gene4786;Dbxref=Genbank:NP_628892.1,GeneID:1100175;Name=NP_628892.1;Note=in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit;gbkey=CDS;gene=rplM;product=50S ribosomal protein L13;protein_id=NP_628892.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5147484	5147876	.	+	.	ID=id5998;Dbxref=GeneID:1100175;Note=Pfam match to entry PF00572 L13%2C Ribosomal protein L 13%2C score 252.90%2C E-value 4.4e-72;gbkey=misc_feature;gene=rplM
NC_003888.3	RefSeq	sequence_feature	5147763	5147831	.	+	.	ID=id5999;Dbxref=GeneID:1100175;Note=PS00783 Ribosomal protein L13 signature;gbkey=misc_feature;gene=rplM
NC_003888.3	RefSeq	ribosome_entry_site	5147928	5147932	.	+	.	ID=id6000;Note=possible RBS upstream of rpsI;gbkey=RBS
NC_003888.3	RefSeq	gene	5147937	5148449	.	+	.	ID=gene4787;Dbxref=GeneID:1100176;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=SCO4735
NC_003888.3	RefSeq	CDS	5147937	5148449	.	+	0	ID=cds4687;Parent=gene4787;Dbxref=Genbank:NP_628893.1,GeneID:1100176;Name=NP_628893.1;Note=forms a direct contact with the tRNA during translation;gbkey=CDS;gene=rpsI;product=30S ribosomal protein S9;protein_id=NP_628893.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5148081	5148446	.	+	.	ID=id6001;Dbxref=GeneID:1100176;Note=Pfam match to entry PF00380 S9%2C Ribosomal protein S9 %2C score 162.60%2C E-value 1e-49;gbkey=misc_feature;gene=rpsI
NC_003888.3	RefSeq	sequence_feature	5148258	5148314	.	+	.	ID=id6002;Dbxref=GeneID:1100176;Note=PS00360 Ribosomal protein S9 signature;gbkey=misc_feature;gene=rpsI
NC_003888.3	RefSeq	ribosome_entry_site	5148664	5148669	.	+	.	ID=id6003;Note=possible RBS upstream of SC6G4.14;gbkey=RBS
NC_003888.3	RefSeq	gene	5148674	5150032	.	+	.	ID=gene4788;Dbxref=GeneID:1100177;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;gene_synonym=SC6G4.14;locus_tag=SCO4736
NC_003888.3	RefSeq	CDS	5148674	5150032	.	+	0	ID=cds4688;Parent=gene4788;Dbxref=Genbank:NP_628894.1,GeneID:1100177;Name=NP_628894.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=NP_628894.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5148674	5149984	.	+	.	ID=id6004;Dbxref=GeneID:1100177;Note=Pfam match to entry PF00408 PGM_PMM%2C Phosphoglucomut ase and phosphomannomutase%2C score 356.30%2C E-value 3.4e-103;gbkey=misc_feature;gene=glmM
NC_003888.3	RefSeq	gene	5150160	5151107	.	-	.	ID=gene4789;Dbxref=GeneID:1100178;Name=SC6G4.15c;gbkey=Gene;gene=SC6G4.15c;gene_biotype=protein_coding;gene_synonym=SC6G4.15c;locus_tag=SCO4737
NC_003888.3	RefSeq	CDS	5150160	5151107	.	-	0	ID=cds4689;Parent=gene4789;Dbxref=Genbank:NP_628895.1,GeneID:1100178;Name=NP_628895.1;Note=SC6G4.15c%2C probable integral membrane protein%2C len: 452 aa%3B simialar to hypothetical protein from Streptomyces albus TR:Q53581 (EMBL:U03114) partial CDS (208 aa)%2C fasta scores%3B opt: 821 z-score: 1301.7 E(): 0%2C 67.0%25 identity in 203 aa overlap;gbkey=CDS;gene=SC6G4.15c;product=hypothetical protein;protein_id=NP_628895.1;transl_table=11
NC_003888.3	RefSeq	gene	5151168	5152157	.	-	.	ID=gene4790;Dbxref=GeneID:1100179;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;gene_synonym=coaA;locus_tag=SCO4738
NC_003888.3	RefSeq	CDS	5151168	5152157	.	-	0	ID=cds4690;Parent=gene4790;Dbxref=Genbank:NP_628896.1,GeneID:1100179;Name=NP_628896.1;Note=catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis;gbkey=CDS;gene=coaA;product=pantothenate kinase;protein_id=NP_628896.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5151816	5151839	.	-	.	ID=id6005;Dbxref=GeneID:1100179;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=coaA
NC_003888.3	RefSeq	gene	5152417	5153223	.	+	.	ID=gene4791;Dbxref=GeneID:1100180;Name=SC6G4.17;gbkey=Gene;gene=SC6G4.17;gene_biotype=protein_coding;gene_synonym=SC6G4.17;locus_tag=SCO4739
NC_003888.3	RefSeq	CDS	5152417	5153223	.	+	0	ID=cds4691;Parent=gene4791;Dbxref=Genbank:NP_628897.1,GeneID:1100180;Name=NP_628897.1;Note=SC6G4.17%2C probable lipoprotein%2C len: 268 aa%3B contain s N-terminal signal sequence and appropriately positioned P S00013 Prokaryotic membrane lipoprotein lipid attachment si te;gbkey=CDS;gene=SC6G4.17;product=lipoprotein;protein_id=NP_628897.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5152459	5152491	.	+	.	ID=id6006;Dbxref=GeneID:1100180;Note=PS00013 Prokaryotic membrane lipoprotein lipid attac hment site;gbkey=misc_feature;gene=SC6G4.17
NC_003888.3	RefSeq	gene	5153334	5155181	.	+	.	ID=gene4792;Dbxref=GeneID:1100181;Name=glmS1;gbkey=Gene;gene=glmS1;gene_biotype=protein_coding;gene_synonym=glmS1,SC6G4.18;locus_tag=SCO4740
NC_003888.3	RefSeq	CDS	5153334	5155181	.	+	0	ID=cds4692;Parent=gene4792;Dbxref=Genbank:NP_628898.1,GeneID:1100181;Name=NP_628898.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;gene=glmS1;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=NP_628898.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5153337	5153885	.	+	.	ID=id6007;Dbxref=GeneID:1100181;Note=Pfam match to entry PF00310 GATase_2%2C Glutamine amid otransferases class-II%2C score 226.20%2C E-value 1.8e-76;gbkey=misc_feature;gene=glmS1
NC_003888.3	RefSeq	gene	5155213	5155785	.	-	.	ID=gene4793;Dbxref=GeneID:1100182;Name=SC6G4.19c;gbkey=Gene;gene=SC6G4.19c;gene_biotype=protein_coding;gene_synonym=SC6G4.19c;locus_tag=SCO4741
NC_003888.3	RefSeq	CDS	5155213	5155785	.	-	0	ID=cds4693;Parent=gene4793;Dbxref=Genbank:NP_628899.1,GeneID:1100182;Name=NP_628899.1;Note=SC6G4.19c%2C unknown%2C len: 190 aa%3B contains Pro-Ser- r ich domain at N-terminus;gbkey=CDS;gene=SC6G4.19c;product=hypothetical protein;protein_id=NP_628899.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5155645	5155767	.	-	.	ID=id6008;Dbxref=GeneID:1100182;Note=corresponds to Pro-Ser rich region in SC6G4.19c;gbkey=repeat_region;gene=SC6G4.19c
NC_003888.3	RefSeq	gene	5155831	5157288	.	-	.	ID=gene4794;Dbxref=GeneID:1100183;Name=SC6G4.20c;gbkey=Gene;gene=SC6G4.20c;gene_biotype=protein_coding;gene_synonym=SC6G4.20c;locus_tag=SCO4742
NC_003888.3	RefSeq	CDS	5155831	5157288	.	-	0	ID=cds4694;Parent=gene4794;Dbxref=Genbank:NP_628900.1,GeneID:1100183;Name=NP_628900.1;Note=SC6G4.20c%2C unknown%2C len: 485 aa%3B similar to hypothetical proteins from many organisms e.g. Y115_MYCTU MTCY77.05 C (Rv3433c) (473 aa)%2C fasta scores%3B opt: 563 z-score: 730.1 E(): 0%2C 48.5%25 identity in 489 aa overlap;gbkey=CDS;gene=SC6G4.20c;product=hypothetical protein;protein_id=NP_628900.1;transl_table=11
NC_003888.3	RefSeq	gene	5157368	5157973	.	+	.	ID=gene4795;Dbxref=GeneID:1100184;Name=SC6G4.21;gbkey=Gene;gene=SC6G4.21;gene_biotype=protein_coding;gene_synonym=SC6G4.21;locus_tag=SCO4743
NC_003888.3	RefSeq	CDS	5157368	5157973	.	+	0	ID=cds4695;Parent=gene4795;Dbxref=Genbank:NP_628901.1,GeneID:1100184;Name=NP_628901.1;Note=SC6G4.21%2C unknown%2C len: 201 aa%3B similar%2C in part%2C to a hypothetical protein from Streptomyces purpurascens TR:Q 54855 (EMBL:X61931) (90 aa)%2C fasta scores%3B opt: 376 z-score : 584.3 E(): 2.8e-25%2C 58.5%25 identity in 94 aa overlap. Cont ains helix-turn-helix motif at aa 28-49 (Score 2176%2C +6.60 SD);gbkey=CDS;gene=SC6G4.21;product=hypothetical protein;protein_id=NP_628901.1;transl_table=11
NC_003888.3	RefSeq	gene	5158001	5158372	.	-	.	ID=gene4796;Dbxref=GeneID:1100185;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;gene_synonym=SC6G4.22c;locus_tag=SCO4744
NC_003888.3	RefSeq	CDS	5158001	5158372	.	-	0	ID=cds4696;Parent=gene4796;Dbxref=Genbank:NP_628902.1,GeneID:1100185;Name=NP_628902.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=4'-phosphopantetheinyl transferase;protein_id=NP_628902.1;transl_table=11
NC_003888.3	RefSeq	gene	5158508	5159683	.	+	.	ID=gene4797;Dbxref=GeneID:1100186;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;gene_synonym=alr;locus_tag=SCO4745
NC_003888.3	RefSeq	CDS	5158508	5159683	.	+	0	ID=cds4697;Parent=gene4797;Dbxref=Genbank:NP_628903.1,GeneID:1100186;Name=NP_628903.1;Note=SC6G4.23%2C alr%2C probable alanine racemase%2C len: 391 a a%3B similar to many e.g. ALR_BACST alanine racemase (EC 5.1. 1.1) (388 aa)%2C fasta scores%3B opt: 532 z-score: 774.2 E(): 0 %2C 38.6%25 identity in 376 aa overlap. Contains PS00395 Alanine racemase pyridoxal-phosphate attachment site;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=NP_628903.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5158637	5158666	.	+	.	ID=id6009;Dbxref=GeneID:1100186;Note=PS00395 Alanine racemase pyridoxal-phosphate attachm ent site;gbkey=misc_feature;gene=alr
NC_003888.3	RefSeq	ribosome_entry_site	5159831	5159834	.	+	.	ID=id6010;Note=possible RBS upstream of SC6G4.24;gbkey=RBS
NC_003888.3	RefSeq	gene	5159838	5161100	.	+	.	ID=gene4798;Dbxref=GeneID:1100187;Name=SC6G4.24;gbkey=Gene;gene=SC6G4.24;gene_biotype=protein_coding;gene_synonym=SC6G4.24;locus_tag=SCO4746
NC_003888.3	RefSeq	CDS	5159838	5161100	.	+	0	ID=cds4698;Parent=gene4798;Dbxref=Genbank:NP_628904.1,GeneID:1100187;Name=NP_628904.1;Note=SC6G4.24%2C possible lipase%2C len: 420 aa%3B some similar ity to e.g. TR:Q59695 (EMBL:L35343) Pseudomonas putida dihy drolipoamide acetyltransferase (370 aa)%2C fasta scores%3B opt: 134 z-score: 204.4 E(): 0.00041%2C 27.0%25 identity in 352 aa overlap. Contains PS00120 Lipases%2C serine active site and P fam match to entry PF00561 abhydrolase%2C alpha/beta hydrolas e fold%2C score 79.50%2C E-value 7e-20. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC6G4.24;product=lipase;protein_id=NP_628904.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5160312	5161025	.	+	.	ID=id6011;Dbxref=GeneID:1100187;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 79.50%2C E-value 7e-20;gbkey=misc_feature;gene=SC6G4.24
NC_003888.3	RefSeq	sequence_feature	5160435	5160464	.	+	.	ID=id6012;Dbxref=GeneID:1100187;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=SC6G4.24
NC_003888.3	RefSeq	gene	5161171	5161617	.	+	.	ID=gene4799;Dbxref=GeneID:1100188;Name=SC6G4.25;gbkey=Gene;gene=SC6G4.25;gene_biotype=protein_coding;gene_synonym=SC6G4.25;locus_tag=SCO4747
NC_003888.3	RefSeq	CDS	5161171	5161617	.	+	0	ID=cds4699;Parent=gene4799;Dbxref=Genbank:NP_628905.1,GeneID:1100188;Name=NP_628905.1;Note=SC6G4.25%2C probable ATP/GTP binding protein%2C len: 148 aa%3B similar to hypothetical proteins from many organisms e .g. YJEE_ECOLI (153 aa)%2C fasta scores%3B opt: 228 z-score: 29 2.3 E(): 5.1e-09%2C 34.1%25 identity in 135 aa overlap and Y097 _MYCTU MTCY78.07 (168 aa)%2C fasta scores%3B opt: 377 z-score: 532.7 E(): 2.1e-22%2C 50.8%25 identity in 120 aa overlap. Conta ins PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC6G4.25;product=ATP/GTP binding protein;protein_id=NP_628905.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5161234	5161257	.	+	.	ID=id6013;Dbxref=GeneID:1100188;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6G4.25
NC_003888.3	RefSeq	ribosome_entry_site	5161753	5161758	.	+	.	ID=id6014;Note=RBS upstream of SC6G4.26;gbkey=RBS
NC_003888.3	RefSeq	gene	5161764	5162000	.	+	.	ID=gene4800;Dbxref=GeneID:1100189;Name=SC6G4.26;gbkey=Gene;gene=SC6G4.26;gene_biotype=protein_coding;gene_synonym=SC6G4.26;locus_tag=SCO4748
NC_003888.3	RefSeq	CDS	5161764	5162000	.	+	0	ID=cds4700;Parent=gene4800;Dbxref=Genbank:NP_628906.1,GeneID:1100189;Name=NP_628906.1;Note=SC6G4.26%2C unknown%2C len: 78 aa%3B contains Gln-rich C-t erminus;gbkey=CDS;gene=SC6G4.26;product=hypothetical protein;protein_id=NP_628906.1;transl_table=11
NC_003888.3	RefSeq	gene	5162036	5162590	.	-	.	ID=gene4801;Dbxref=GeneID:1100190;Name=SC6G4.27c;gbkey=Gene;gene=SC6G4.27c;gene_biotype=protein_coding;gene_synonym=SC6G4.27c;locus_tag=SCO4749
NC_003888.3	RefSeq	CDS	5162036	5162590	.	-	0	ID=cds4701;Parent=gene4801;Dbxref=Genbank:NP_628907.1,GeneID:1100190;Name=NP_628907.1;Note=SC6G4.27c%2C possible hypothetical protein%2C len: 184 aa%3B similar to TR:Q9KZZ6 (EMBL:AL353815) Streptomyces coelicolor  hypothetical protein SCD6.08%2C 189 aa%3B fasta scores:opt: 495 Z-score: 540.3 E(): 1.8e-22%3B 48.066%25 identity in 181 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC6G4.27c;product=hypothetical protein;protein_id=NP_628907.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5162599	5162603	.	-	.	ID=id6015;Note=possible RBS upstream of SC6G4.27c;gbkey=RBS
NC_003888.3	RefSeq	gene	5162784	5163437	.	+	.	ID=gene4802;Dbxref=GeneID:1100191;Name=SC6G4.28;gbkey=Gene;gene=SC6G4.28;gene_biotype=protein_coding;gene_synonym=SC6G4.28;locus_tag=SCO4750
NC_003888.3	RefSeq	CDS	5162784	5163437	.	+	0	ID=cds4702;Parent=gene4802;Dbxref=Genbank:NP_628908.1,GeneID:1100191;Name=NP_628908.1;Note=SC6G4.28%2C unknown%2C len: 217 aa%3B similar to hypothetical proteins from many organisms e.g. YEAZ_ECOLI (231 aa)%2C fasta scores%3B opt: 257 z-score: 332.3 E(): 3e-11%2C 33.9%25 ide ntity in 221 aa overlapand Y098_MYCTU MTCY78.08 (211 aa)%2C f asta scores%3B opt: 453 z-score: 467.2 E(): 9.3e-19%2C 48.1%25 i dentity in 212 aa overlap. Also some similarity to downstre am protein gcp (SC6G4.30%3B E(): 0.00023%2C 26.5%25 identity in 2 34 aa overlap);gbkey=CDS;gene=SC6G4.28;product=hypothetical protein;protein_id=NP_628908.1;transl_table=11
NC_003888.3	RefSeq	gene	5163434	5163967	.	+	.	ID=gene4803;Dbxref=GeneID:1100192;Name=SC6G4.29;gbkey=Gene;gene=SC6G4.29;gene_biotype=protein_coding;gene_synonym=SC6G4.29;locus_tag=SCO4751
NC_003888.3	RefSeq	CDS	5163434	5163967	.	+	0	ID=cds4703;Parent=gene4803;Dbxref=Genbank:NP_628909.1,GeneID:1100192;Name=NP_628909.1;Note=SC6G4.29%2C probable acetyltransferase%2C len: 177 aa%3B s imilar to e.g. RIMI_ECOLI ribosomal-protein-alanine acetyl transferase (148 aa)%2C fasta scores%3B opt: 166 z-score: 257.4 E(): 4.5e-07%2C 33.3%25 identity in 120 aa overlap. Contains Pf am match to entry PF00583 Acetyltransf%2C Acetyltransferase ( GNAT) family%2C score 59.60%2C E-value 6.7e-14;gbkey=CDS;gene=SC6G4.29;product=acetyltransferase;protein_id=NP_628909.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5163473	5163847	.	+	.	ID=id6016;Dbxref=GeneID:1100192;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltran sferase (GNAT) family%2C score 59.60%2C E-value 6.7e-14;gbkey=misc_feature;gene=SC6G4.29
NC_003888.3	RefSeq	ribosome_entry_site	5163945	5163948	.	+	.	ID=id6017;Dbxref=GeneID:1100192;Note=possible RBS upstream of gcp;gbkey=RBS;gene=SC6G4.29
NC_003888.3	RefSeq	gene	5163960	5165084	.	+	.	ID=gene4804;Dbxref=GeneID:1100193;Name=gcp;gbkey=Gene;gene=gcp;gene_biotype=protein_coding;gene_synonym=gcp;locus_tag=SCO4752
NC_003888.3	RefSeq	CDS	5163960	5165084	.	+	0	ID=cds4704;Parent=gene4804;Dbxref=Genbank:NP_628910.1,GeneID:1100193;Name=NP_628910.1;Note=in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the  glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity;gbkey=CDS;gene=gcp;product=DNA-binding/iron metalloprotein/AP endonuclease;protein_id=NP_628910.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5165064	5165069	.	+	.	ID=id6018;Dbxref=GeneID:1100193;Note=possible RBS upstream of SC6G4.31;gbkey=RBS;gene=gcp
NC_003888.3	RefSeq	gene	5165081	5165353	.	+	.	ID=gene4805;Dbxref=GeneID:1100194;Name=SC6G4.31;gbkey=Gene;gene=SC6G4.31;gene_biotype=protein_coding;gene_synonym=SC6G4.31;locus_tag=SCO4753
NC_003888.3	RefSeq	CDS	5165081	5165353	.	+	0	ID=cds4705;Parent=gene4805;Dbxref=Genbank:NP_628911.1,GeneID:1100194;Name=NP_628911.1;Note=SC6G4.31%2C unknown%2C len: 90 aa;gbkey=CDS;gene=SC6G4.31;product=hypothetical protein;protein_id=NP_628911.1;transl_table=11
NC_003888.3	RefSeq	gene	5165438	5166505	.	+	.	ID=gene4806;Dbxref=GeneID:1100195;Name=SC6G4.32;gbkey=Gene;gene=SC6G4.32;gene_biotype=protein_coding;gene_synonym=SC6G4.32;locus_tag=SCO4754
NC_003888.3	RefSeq	CDS	5165438	5166505	.	+	0	ID=cds4706;Parent=gene4806;Dbxref=Genbank:NP_628912.1,GeneID:1100195;Name=NP_628912.1;Note=SC6G4.32%2C probable transcriptional regulator%2C len: 355 aa%3B similar to many members of the lacI family e.g. RBSR _ECOLI ribose operon repressor (329 aa)%2C fasta scores%3B opt: 588 z-score: 718.4 E(): 9.4e-33%2C 34.8%25 identity in 305 aa overlap. Contains PS00356 Bacterial regulatory proteins%2C lacI family signature%2C helix-turn-helix motif at aa 20-41 (Score 2255%2C +6.87 SD) and Pfam matches to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 36.90%2C E -value 6.1e-09 and to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family%2C score 127.80%2C E-va lue 2e-34;gbkey=CDS;gene=SC6G4.32;product=transcriptional regulator;protein_id=NP_628912.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5165486	5165569	.	+	.	ID=id6019;Dbxref=GeneID:1100195;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulato ry proteins%2C lacI family%2C score 36.90%2C E-value 6.1e-09;gbkey=misc_feature;gene=SC6G4.32
NC_003888.3	RefSeq	sequence_feature	5165498	5165554	.	+	.	ID=id6020;Dbxref=GeneID:1100195;Note=PS00356 Bacterial regulatory proteins%2C lacI family s ignature;gbkey=misc_feature;gene=SC6G4.32
NC_003888.3	RefSeq	sequence_feature	5165648	5166376	.	+	.	ID=id6021;Dbxref=GeneID:1100195;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Peripla smic binding proteins and LacI family.%2C score 127.80%2C E-val ue 2e-34;gbkey=misc_feature;gene=SC6G4.32
NC_003888.3	RefSeq	gene	5166604	5167686	.	+	.	ID=gene4807;Dbxref=GeneID:1100196;Name=SC6G4.33;gbkey=Gene;gene=SC6G4.33;gene_biotype=protein_coding;gene_synonym=SC6G4.33;locus_tag=SCO4755
NC_003888.3	RefSeq	CDS	5166604	5167686	.	+	0	ID=cds4707;Parent=gene4807;Dbxref=Genbank:NP_628913.1,GeneID:1100196;Name=NP_628913.1;Note=SC6G4.33%2C possible transcriptional regulator%2C len: 360 aa%3B similar to many membrane bound regulators e.g. TR:P96499 (EMBL:U56901) B. subtilis transcriptional regulator (391 aa)%2C fasta scores%3B opt: 333 z-score: 2 78.7 E(): 2.9e-08%2C 28.1%25 identity in 352 aa overlap. Also similar to SC1C3.08c (E(): 0%2C 52.7%25 identity in 334 aa overlap. Contains possible transmembrane domain near N-terminus;gbkey=CDS;gene=SC6G4.33;product=transcriptional regulator;protein_id=NP_628913.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5167787	5167791	.	+	.	ID=id6022;Note=possible RBS upstream of SC6G4.34;gbkey=RBS
NC_003888.3	RefSeq	gene	5167797	5168153	.	+	.	ID=gene4808;Dbxref=GeneID:1100197;Name=SC6G4.34;gbkey=Gene;gene=SC6G4.34;gene_biotype=protein_coding;gene_synonym=SC6G4.34;locus_tag=SCO4756
NC_003888.3	RefSeq	CDS	5167797	5168153	.	+	0	ID=cds4708;Parent=gene4808;Dbxref=Genbank:NP_628914.1,GeneID:1100197;Name=NP_628914.1;Note=SC6G4.34%2C unknown%2C len: 118 aa%3B similar to a hypothe tical protein from Rhizobium meliloti TR:Q52996 (EMBL:L3926 5) (100 aa)%2C fasta scores%3B opt: 130 z-score: 222.8 E(): 3.8 e-05%2C 28.8%25 identity in 73 aa overlap;gbkey=CDS;gene=SC6G4.34;product=hypothetical protein;protein_id=NP_628914.1;transl_table=11
NC_003888.3	RefSeq	gene	5168216	5169475	.	+	.	ID=gene4809;Dbxref=GeneID:1100198;Name=SC6G4.35;gbkey=Gene;gene=SC6G4.35;gene_biotype=protein_coding;gene_synonym=SC6G4.35;locus_tag=SCO4757
NC_003888.3	RefSeq	CDS	5168216	5169475	.	+	0	ID=cds4709;Parent=gene4809;Dbxref=Genbank:NP_628915.1,GeneID:1100198;Name=NP_628915.1;Note=SC6G4.35%2C unknown%2C len: 419 aa%3B similar to hypotheti cal protein from Rhizobium meliloti TR:Q52997 (EMBL:L39265) (66 aa%2C partial) opt: 154 z-score: 162.6 E(): 0.086%2C 40.0%25 identity in 50 aa overlap. N-terminus is weakly similar to several sigma factors e.g. CARQ_MYXXA RNA polymerase sigma factor carQ (174 aa)%2C fasta scores%3B opt: 153 z-score: 172. 4 E(): 0.024%2C 29.8%25 identity in 161 aa overlap;gbkey=CDS;gene=SC6G4.35;product=hypothetical protein;protein_id=NP_628915.1;transl_table=11
NC_003888.3	RefSeq	gene	5169472	5170752	.	-	.	ID=gene4810;Dbxref=GeneID:1100199;Name=SC6G4.36c;gbkey=Gene;gene=SC6G4.36c;gene_biotype=protein_coding;gene_synonym=SC6G4.36c;locus_tag=SCO4758
NC_003888.3	RefSeq	CDS	5169472	5170752	.	-	0	ID=cds4710;Parent=gene4810;Dbxref=Genbank:NP_628916.1,GeneID:1100199;Name=NP_628916.1;Note=SC6G4.36c%2C similar to hypothetical proteins e.g. M. tuberculosis TR:O53284 (EMBL:AL021287) MTV012.52c (358 aa) %2C fasta scores%3B opt: 545 z-score: 329.5 E(): 4.1e-11%2C 36.2%25 identity in 354 aa overlap;gbkey=CDS;gene=SC6G4.36c;product=hypothetical protein;protein_id=NP_628916.1;transl_table=11
NC_003888.3	RefSeq	gene	5170780	5171655	.	+	.	ID=gene4811;Dbxref=GeneID:1100200;Name=SC6G4.37;gbkey=Gene;gene=SC6G4.37;gene_biotype=protein_coding;gene_synonym=SC6G4.37;locus_tag=SCO4759
NC_003888.3	RefSeq	CDS	5170780	5171655	.	+	0	ID=cds4711;Parent=gene4811;Dbxref=Genbank:NP_628917.1,GeneID:1100200;Name=NP_628917.1;Note=SC6G4.37%2C probable hypothetical protein%2C len: 264 aa%3B contains possible N-terminal signal sequence. Similar to down stream gene SC6G4.38 (E(): 3.9e-19%2C 38.7%25 identity in 248 aa overlap);gbkey=CDS;gene=SC6G4.37;product=hypothetical protein;protein_id=NP_628917.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5171640	5171644	.	+	.	ID=id6023;Dbxref=GeneID:1100200;Note=possible RBS upstream of SC6G4.38;gbkey=RBS;gene=SC6G4.37
NC_003888.3	RefSeq	gene	5171652	5172401	.	+	.	ID=gene4812;Dbxref=GeneID:1100201;Name=SC6G4.38;gbkey=Gene;gene=SC6G4.38;gene_biotype=protein_coding;gene_synonym=SC6G4.38;locus_tag=SCO4760
NC_003888.3	RefSeq	CDS	5171652	5172401	.	+	0	ID=cds4712;Parent=gene4812;Dbxref=Genbank:NP_628918.1,GeneID:1100201;Name=NP_628918.1;Note=SC6G4.38%2C probable hypothetical protein%2C len: 249 aa%3B slight similarity to S. lividans TR:Q54413 (EMBL:M64552) acetyl-xylan esterase precursor (335 aa)%2C fasta scores%3B opt: 16 3 z-score: 197.4 E(): 0.00099%2C 28.9%25 identity in 180 aa overlap. Contains N-terminal signal sequence;gbkey=CDS;gene=SC6G4.38;product=hypothetical protein;protein_id=NP_628918.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5172012	5175013	.	+	.	ID=id6024;Note=99.4%25 match to SCGROEL X75206 S.coelicolor groES and groEL1 genes for GroES and GroEL1 proteins from 1 to 3000;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5172725	5172730	.	+	.	ID=id6025;Note=possible RBS upstream of groES;gbkey=RBS
NC_003888.3	RefSeq	gene	5172737	5173045	.	+	.	ID=gene4813;Dbxref=GeneID:1100202;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SCO4761
NC_003888.3	RefSeq	CDS	5172737	5173045	.	+	0	ID=cds4713;Parent=gene4813;Dbxref=Genbank:NP_628919.1,GeneID:1100202;Name=NP_628919.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=co-chaperonin GroES;protein_id=NP_628919.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5172758	5173039	.	+	.	ID=id6026;Dbxref=GeneID:1100202;Note=Pfam match to entry PF00166 cpn10%2C Chaperonins 10 Kd subunit%2C score 200.60%2C E-value 2.4e-56;gbkey=misc_feature;gene=groES
NC_003888.3	RefSeq	sequence_feature	5172764	5172838	.	+	.	ID=id6027;Dbxref=GeneID:1100202;Note=PS00681 Chaperonins cpn10 signature;gbkey=misc_feature;gene=groES
NC_003888.3	RefSeq	ribosome_entry_site	5173163	5173166	.	+	.	ID=id6028;Note=possible RBS upstream of groEL1;gbkey=RBS
NC_003888.3	RefSeq	gene	5173179	5174804	.	+	.	ID=gene4814;Dbxref=GeneID:1100203;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;gene_synonym=groEL1;locus_tag=SCO4762
NC_003888.3	RefSeq	CDS	5173179	5174804	.	+	0	ID=cds4714;Parent=gene4814;Dbxref=Genbank:NP_628920.1,GeneID:1100203;Name=NP_628920.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is not essential for growth;gbkey=CDS;gene=groEL;product=chaperonin GroEL;protein_id=NP_628920.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5173242	5174753	.	+	.	ID=id6029;Dbxref=GeneID:1100203;Note=Pfam match to entry PF00118 cpn60_TCP1%2C Chaperonins cpn60 and TCP-1%2C score 759.20%2C E-value 1.7e-224;gbkey=misc_feature;gene=groEL
NC_003888.3	RefSeq	sequence_feature	5174391	5174426	.	+	.	ID=id6030;Dbxref=GeneID:1100203;Note=PS00296 Chaperonins cpn60 signature;gbkey=misc_feature;gene=groEL
NC_003888.3	RefSeq	gene	5175044	5176285	.	-	.	ID=gene4815;Dbxref=GeneID:1100204;Name=SC6G4.41c;gbkey=Gene;gene=SC6G4.41c;gene_biotype=protein_coding;gene_synonym=SC6G4.41c;locus_tag=SCO4763
NC_003888.3	RefSeq	CDS	5175044	5176285	.	-	0	ID=cds4715;Parent=gene4815;Dbxref=Genbank:NP_628921.1,GeneID:1100204;Name=NP_628921.1;Note=SC6G4.41c%2C unknown%2C len: 413 aa;gbkey=CDS;gene=SC6G4.41c;product=hypothetical protein;protein_id=NP_628921.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5176296	5176299	.	-	.	ID=id6031;Note=possible RBS upstream of SC6G4.41c;gbkey=RBS
NC_003888.3	RefSeq	gene	5176428	5177201	.	-	.	ID=gene4816;Dbxref=GeneID:1100205;Name=SC6G4.42c;gbkey=Gene;gene=SC6G4.42c;gene_biotype=protein_coding;gene_synonym=SC6G4.42c;locus_tag=SCO4764
NC_003888.3	RefSeq	CDS	5176428	5177201	.	-	0	ID=cds4716;Parent=gene4816;Dbxref=Genbank:NP_628922.1,GeneID:1100205;Name=NP_628922.1;Note=SC6G4.42c%2C probable dehydrogenase%2C len: 257 aa%3B simi lar to many members of the short-chain dehydrogenases/reduc tases family e.g. TR:Q54190 (EMBL:D14040) S. galilaeus keto acyl reductase aknIII (261 aa)%2C fasta scores%3B opt: 350 z-sc ore: 438.4 E(): 3.5e-17%2C 33.5%25 identity in 233 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C Alcohol/oth er dehydrogenases%2C short chain type%2C score 158.00%2C E-value 1.6e-43;gbkey=CDS;gene=SC6G4.42c;product=dehydrogenase;protein_id=NP_628922.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5176650	5177198	.	-	.	ID=id6032;Dbxref=GeneID:1100205;Note=Pfam match to entry PF00106 adh_short%2C Alcohol/other dehydrogenases%2C short chain type%2C score 158.00%2C E-value 1. 6e-43;gbkey=misc_feature;gene=SC6G4.42c
NC_003888.3	RefSeq	gene	5177256	5177957	.	-	.	ID=gene4817;Dbxref=GeneID:1100206;Name=SC6G4.43c;gbkey=Gene;gene=SC6G4.43c;gene_biotype=protein_coding;gene_synonym=SC6G4.43c;locus_tag=SCO4765
NC_003888.3	RefSeq	CDS	5177256	5177957	.	-	0	ID=cds4717;Parent=gene4817;Dbxref=Genbank:NP_628923.1,GeneID:1100206;Name=NP_628923.1;Note=SC6G4.43c%2C unknown%2C len: 233 aa%3B similar to hypothet ical proteins e.g. M. tuberculosis TR:P95151 (EMBL:Z83859) MTCY359.09 (251 aa)%2C fasta scores%3B opt: 716 z-score: 609.7 E(): 1e-26%2C 54.4%25 identity in 215 aa overlap;gbkey=CDS;gene=SC6G4.43c;product=hypothetical protein;protein_id=NP_628923.1;transl_table=11
NC_003888.3	RefSeq	gene	5178021	5178941	.	+	.	ID=gene4818;Dbxref=GeneID:1100207;Name=SC6G4.44;gbkey=Gene;gene=SC6G4.44;gene_biotype=protein_coding;gene_synonym=SC6G4.44;locus_tag=SCO4766
NC_003888.3	RefSeq	CDS	5178021	5178941	.	+	0	ID=cds4718;Parent=gene4818;Dbxref=Genbank:NP_628924.1,GeneID:1100207;Name=NP_628924.1;Note=SC6G4.44%2C probable transcriptional regulator%2C len: 306 aa%3B similar to many members of the lysR family e.g. CYNR_ ECOLI cyn operon transcriptional activator (299 aa)%2C fasta scores%3B opt: 371 z-score: 524.3 E(): 5.8e-22%2C 30.3%25 identity in 307 aa overlap. Contains PS00044 Bacterial regulatory proteins%2C lysR family signature%2C helix-turn-helix motif at aa 18-39 (Score 1603%2C +4.65 SD) and Pfam match to entry PF0 0126 HTH_1%2C Bacterial regulatory helix-loop-helix proteins%2C lysR family%2C score 161.30%2C E-value 1.6e-44;gbkey=CDS;gene=SC6G4.44;product=transcriptional regulator;protein_id=NP_628924.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5178030	5178458	.	+	.	ID=id6033;Dbxref=GeneID:1100207;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulat ory helix-loop-helix proteins%2C lysR family%2C score 161.30%2C E -value 1.6e-44;gbkey=misc_feature;gene=SC6G4.44
NC_003888.3	RefSeq	sequence_feature	5178072	5178164	.	+	.	ID=id6034;Dbxref=GeneID:1100207;Note=PS00044 Bacterial regulatory proteins%2C lysR family s ignature;gbkey=misc_feature;gene=SC6G4.44
NC_003888.3	RefSeq	gene	5179007	5179345	.	-	.	ID=gene4819;Dbxref=GeneID:1100208;Name=SC6G4.45c;gbkey=Gene;gene=SC6G4.45c;gene_biotype=protein_coding;gene_synonym=SC6G4.45c;locus_tag=SCO4767
NC_003888.3	RefSeq	CDS	5179007	5179345	.	-	0	ID=cds4719;Parent=gene4819;Dbxref=Genbank:NP_628925.1,GeneID:1100208;Name=NP_628925.1;Note=SC6G4.45c%2C probable regulatory protein%2C len: 112 aa%3B similar to TR:Q53963 (EMBL:X62287) S.coelicolor regulatory protein WhiB (87 aa)%2C fasta scores%3B opt: 201 z-score: 352. 1 E(): 2.3e-12%2C 49.3%25 identity in 71 aa overlap;gbkey=CDS;gene=SC6G4.45c;product=regulatory protein;protein_id=NP_628925.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5179353	5179358	.	-	.	ID=id6035;Note=possible RBS upstream of SC6G4.45c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5179716	5179720	.	+	.	ID=id6036;Note=possible RBS upstream of SC6G4.46;gbkey=RBS
NC_003888.3	RefSeq	gene	5179727	5180338	.	+	.	ID=gene4820;Dbxref=GeneID:1100209;Name=SC6G4.46;gbkey=Gene;gene=SC6G4.46;gene_biotype=protein_coding;gene_synonym=SC6G4.46;locus_tag=SCO4768
NC_003888.3	RefSeq	CDS	5179727	5180338	.	+	0	ID=cds4720;Parent=gene4820;Dbxref=Genbank:NP_628926.1,GeneID:1100209;Name=NP_628926.1;Note=SC6G4.46%2C probable two-component regulator%2C len: 203 aa%3B similar to many members of the luxR family e.g. DEGU_BACSU transcriptional regulatory protein DegU (229 aa)%2C fasta scores%3B opt: 229 z-score: 546.3 E(): 3.4e-23%2C 30.9%25 identi ty in 223 aa overlap. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature and Pfam matchs to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 108.40%2C E-value 1.4e-28 and to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 65.60%2C E-value 1e-15;gbkey=CDS;gene=SC6G4.46;product=two-component regulator;protein_id=NP_628926.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5179730	5180071	.	+	.	ID=id6037;Dbxref=GeneID:1100209;Note=Pfam match to entry PF00072 response_reg%2C Response r egulator receiver domain%2C score 108.40%2C E-value 1.4e-28;gbkey=misc_feature;gene=SC6G4.46
NC_003888.3	RefSeq	sequence_feature	5180141	5180335	.	+	.	ID=id6038;Dbxref=GeneID:1100209;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulato ry proteins%2C luxR family%2C score 65.60%2C E-value 1e-15;gbkey=misc_feature;gene=SC6G4.46
NC_003888.3	RefSeq	sequence_feature	5180192	5180275	.	+	.	ID=id6039;Dbxref=GeneID:1100209;Note=PS00622 Bacterial regulatory proteins%2C luxR family s ignature;gbkey=misc_feature;gene=SC6G4.46
NC_003888.3	RefSeq	sequence_feature	5180293	5181239	.	+	.	ID=id6040;Note=previously sequenced fragment EMBL:AJ010601 Streptomyces coelicolor A3(2) DNA for whiD and whiK loci;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5180620	5181207	.	+	.	ID=gene4821;Dbxref=GeneID:1100210;Name=SCD63.01;gbkey=Gene;gene=SCD63.01;gene_biotype=protein_coding;gene_synonym=SCD63.01;locus_tag=SCO4769
NC_003888.3	RefSeq	CDS	5180620	5181207	.	+	0	ID=cds4721;Parent=gene4821;Dbxref=Genbank:NP_628927.1,GeneID:1100210;Name=NP_628927.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this protein is involved in expression of ribosome-associated gene products in stationary phase;gbkey=CDS;gene=SCD63.01;product=RNA polymerase sigma factor SigD;protein_id=NP_628927.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5181317	5181437	.	+	.	ID=id6041;Note=previously sequenced DNA fragment EMBL:AJ010601 Streptomyces coelicolor A3(2) DNA for whiD and whiK loci;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5181347	5182852	.	+	.	ID=gene4822;Dbxref=GeneID:1100211;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;gene_synonym=guaB,SCD63.02;locus_tag=SCO4770
NC_003888.3	RefSeq	CDS	5181347	5182852	.	+	0	ID=cds4722;Parent=gene4822;Dbxref=Genbank:NP_628928.1,GeneID:1100211;Name=NP_628928.1;Note=SCD63.02%2C guaB%2C inosine 5' monophosphate dehydrogenase%2C len: 501 aa%3B highly similar to previously sequenced TR:O86844 (EMBL:AJ010601) Streptomyces coelicolor inosine 5' monophosphate dehydrogenase%2C 523 aa%3B fasta scores: opt: 2626 z-score: 2896.3 E(): 0%3B 84.9%25 identity in 509 aa overlap. Contains Pfam matches to entries PF01574 IMPDH_N%2C IMP dehydrogenase / GMP reductase N terminus%2C 2x PF00571 CBS%2C CBS domain and PF00478 IMPDH_C%2C IMP dehydrogenase / GMP reductase C terminus and match to Prosite entry PS00487 IMP dehydrogenase / GMP reductase signature;gbkey=CDS;gene=guaB;product=inosine 5' monophosphate dehydrogenase;protein_id=NP_628928.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5181374	5181637	.	+	.	ID=id6042;Dbxref=GeneID:1100211;Note=Pfam match to entry PF01574 IMPDH_N%2C IMP dehydrogenase / GMP reductase N terminus%2C score 175.90%2C E-value 6.8e-49;gbkey=misc_feature;gene=guaB
NC_003888.3	RefSeq	sequence_feature	5181625	5182703	.	+	.	ID=id6043;Dbxref=GeneID:1100211;Note=previously sequenced DNA fragment EMBL:AJ010601 Streptomyces coelicolor A3(2) DNA for whiD and whiK loci;gbkey=misc_feature;gene=guaB
NC_003888.3	RefSeq	sequence_feature	5181641	5181802	.	+	.	ID=id6044;Dbxref=GeneID:1100211;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 46.80%2C E-value 5e-10;gbkey=misc_feature;gene=guaB
NC_003888.3	RefSeq	sequence_feature	5181824	5181985	.	+	.	ID=id6045;Dbxref=GeneID:1100211;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 40.00%2C E-value 5.4e-08;gbkey=misc_feature;gene=guaB
NC_003888.3	RefSeq	sequence_feature	5182073	5182756	.	+	.	ID=id6046;Dbxref=GeneID:1100211;Note=Pfam match to entry PF00478 IMPDH_C%2C IMP dehydrogenase / GMP reductase C terminus%2C score 338.30%2C E-value 8.7e-98;gbkey=misc_feature;gene=guaB
NC_003888.3	RefSeq	sequence_feature	5182247	5182285	.	+	.	ID=id6047;Dbxref=GeneID:1100211;Note=PS00487 IMP dehydrogenase / GMP reductase signature;gbkey=misc_feature;gene=guaB
NC_003888.3	RefSeq	sequence_feature	5182717	5183232	.	+	.	ID=id6048;Note=previously sequenced DNA fragment EMBL:AJ010601 Streptomyces coelicolor A3(2) DNA for whiD and whiK loci;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5182993	5184117	.	+	.	ID=gene4823;Dbxref=GeneID:1100212;Name=SCD63.03;gbkey=Gene;gene=SCD63.03;gene_biotype=protein_coding;gene_synonym=SCD63.03;locus_tag=SCO4771
NC_003888.3	RefSeq	CDS	5182993	5184117	.	+	0	ID=cds4723;Parent=gene4823;Dbxref=Genbank:NP_628929.1,GeneID:1100212;Name=NP_628929.1;Note=catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate;gbkey=CDS;gene=SCD63.03;product=inosine 5-monophosphate dehydrogenase;protein_id=NP_628929.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5183017	5183226	.	+	.	ID=id6049;Dbxref=GeneID:1100212;Note=Pfam match to entry PF01574 IMPDH_N%2C IMP dehydrogenase / GMP reductase N terminus%2C score 1.10%2C E-value 0.00079;gbkey=misc_feature;gene=SCD63.03
NC_003888.3	RefSeq	sequence_feature	5183437	5184084	.	+	.	ID=id6050;Dbxref=GeneID:1100212;Note=Pfam match to entry PF00478 IMPDH_C%2C IMP dehydrogenase / GMP reductase C terminus%2C score 44.60%2C E-value 1.1e-09;gbkey=misc_feature;gene=SCD63.03
NC_003888.3	RefSeq	sequence_feature	5183742	5183858	.	+	.	ID=id6051;Dbxref=GeneID:1100212;Note=previously sequenced DNA fragment EMBL:AJ010601 Streptomyces coelicolor A3(2) DNA for whiD and whiK loci;gbkey=misc_feature;gene=SCD63.03
NC_003888.3	RefSeq	gene	5184449	5185669	.	+	.	ID=gene4824;Dbxref=GeneID:1100213;Name=SCD63.04;gbkey=Gene;gene=SCD63.04;gene_biotype=protein_coding;gene_synonym=SCD63.04;locus_tag=SCO4772
NC_003888.3	RefSeq	CDS	5184449	5185669	.	+	0	ID=cds4724;Parent=gene4824;Dbxref=Genbank:NP_628930.1,GeneID:1100213;Name=NP_628930.1;Note=SCD63.04%2C possible transposase%2C len: 406 aa%3B similar to TR:Q9X8Z6 (EMBL:AL078610) Streptomyces coelicolor transposase SCH35.10%2C 407 aa%3B fasta scores: opt: 513 z-score: 604.0 E(): 3.2e-26%3B 29.9%25 identity in 408 aa overlap. Contains Pfam match to entry PF01385 Transposase_2%2C Probable transposase;gbkey=CDS;gene=SCD63.04;product=transposase;protein_id=NP_628930.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5184536	5185363	.	+	.	ID=id6052;Dbxref=GeneID:1100213;Note=Pfam match to entry PF01385 Transposase_2%2C Probable transposase%2C score 89.90%2C E-value 5.1e-23;gbkey=misc_feature;gene=SCD63.04
NC_003888.3	RefSeq	gene	5185771	5186988	.	-	.	ID=gene4825;Dbxref=GeneID:1100214;Name=SCD63.05c;gbkey=Gene;gene=SCD63.05c;gene_biotype=protein_coding;gene_synonym=SCD63.05c;locus_tag=SCO4773
NC_003888.3	RefSeq	CDS	5185771	5186988	.	-	0	ID=cds4725;Parent=gene4825;Dbxref=Genbank:NP_628931.1,GeneID:1100214;Name=NP_628931.1;Note=SCD63.05c%2C probable nucleotide-sugar dehydrogenase%2C len: 405 aa%3B similar to SW:WECC_ECOLI (EMBL:M87049) Escherichia coli UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (EC 1.1.1.-) WecC%2C 420 aa%3B fasta scores: opt: 565 z-score: 606.3 E(): 2.4e-26%3B 31.7%25 identity in 420 aa overlap. Contains Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family;gbkey=CDS;gene=SCD63.05c;product=nucleotide-sugar dehydrogenase;protein_id=NP_628931.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5185810	5186982	.	-	.	ID=id6053;Dbxref=GeneID:1100214;Note=Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family%2C score 182.20%2C E-value 8.3e-51;gbkey=misc_feature;gene=SCD63.05c
NC_003888.3	RefSeq	ribosome_entry_site	5187281	5187285	.	+	.	ID=id6054;gbkey=RBS
NC_003888.3	RefSeq	gene	5187291	5188997	.	+	.	ID=gene4826;Dbxref=GeneID:1100215;Name=SCD63.06;gbkey=Gene;gene=SCD63.06;gene_biotype=protein_coding;gene_synonym=SCD63.06;locus_tag=SCO4774
NC_003888.3	RefSeq	CDS	5187291	5188997	.	+	0	ID=cds4726;Parent=gene4826;Dbxref=Genbank:NP_628932.1,GeneID:1100215;Name=NP_628932.1;Note=SCD63.06%2C probable glycerol phosphate dehydrogenase%2C len: 568 aa%3B similar to SW:GLPD_BACSU (EMBL:M34393) Bacillus subtilis aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.99.5) GlpD%2C 555 aa%3B fasta scores: opt: 815 z-score: 910.2 E(): 0%3B 32.1%25 identity in 546 aa overlap. Contains Pfam match to entry PF01224 FAD_Gly3P_dh%2C FAD-dependent glycerol-3-phosphate dehydrogenase and match to Prosite entry PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2;gbkey=CDS;gene=SCD63.06;product=glycerol phosphate dehydrogenase;protein_id=NP_628932.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5187348	5188955	.	+	.	ID=id6055;Dbxref=GeneID:1100215;Note=Pfam match to entry PF01224 FAD_Gly3P_dh%2C FAD-dependent glycerol-3-phosphate dehydrogenase%2C score 675.00%2C E-value 3.7e-199;gbkey=misc_feature;gene=SCD63.06
NC_003888.3	RefSeq	sequence_feature	5188416	5188448	.	+	.	ID=id6056;Dbxref=GeneID:1100215;Note=PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2;gbkey=misc_feature;gene=SCD63.06
NC_003888.3	RefSeq	ribosome_entry_site	5189088	5189092	.	+	.	ID=id6057;gbkey=RBS
NC_003888.3	RefSeq	gene	5189098	5191251	.	+	.	ID=gene4827;Dbxref=GeneID:1100216;Name=pkaH;gbkey=Gene;gene=pkaH;gene_biotype=protein_coding;gene_synonym=pkaH,SCD63.07;locus_tag=SCO4775
NC_003888.3	RefSeq	CDS	5189098	5191251	.	+	0	ID=cds4727;Parent=gene4827;Dbxref=Genbank:NP_628933.1,GeneID:1100216;Name=NP_628933.1;Note=SCD63.07%2C pkaH%2C Ser/Thr protein kinase%2C len: 717 aa%3B similar to TR:Q9XAI1 (EMBL:AL079348) Streptomyces coelicolor  Ser/Thr protein kinase SC66T3.32c%2C 783 aa%3B fasta scores: opt: 570 z-score: 386.8 E(): 4.1e-14%3B 30.6%25 identity in 687 aa overlap and to SW:PKAA_STRCO (EMBL:D86821) Streptomyces coelicolor Ser/Thr protein kinase PkaA (EC 2.7.1.-)%2C 543 aa%3B fasta scores: opt: 543 z-score: 370.9 E(): 3.1e-13%3B 29.8%25 identity in 476 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature and possible hydrophobic membrane spanning region;gbkey=CDS;gene=pkaH;product=Ser/Thr protein kinase;protein_id=NP_628933.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5189164	5189901	.	+	.	ID=id6058;Dbxref=GeneID:1100216;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 177.40%2C E-value 2.3e-49;gbkey=misc_feature;gene=pkaH
NC_003888.3	RefSeq	sequence_feature	5189182	5189253	.	+	.	ID=id6059;Dbxref=GeneID:1100216;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=pkaH
NC_003888.3	RefSeq	sequence_feature	5189517	5189916	.	+	.	ID=id6060;Dbxref=GeneID:1100216;Note=BlastN hit to EMBL:AB016932 Streptomyces coelicolor gene for protein Ser/Thr kinase pkaD%2C complete cds.;gbkey=misc_feature;gene=pkaH
NC_003888.3	RefSeq	sequence_feature	5189533	5189571	.	+	.	ID=id6061;Dbxref=GeneID:1100216;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaH
NC_003888.3	RefSeq	gene	5191425	5194364	.	+	.	ID=gene4828;Dbxref=GeneID:1100217;Name=SCD63.08;gbkey=Gene;gene=SCD63.08;gene_biotype=protein_coding;gene_synonym=SCD63.08;locus_tag=SCO4776
NC_003888.3	RefSeq	CDS	5191425	5194364	.	+	0	ID=cds4728;Parent=gene4828;Dbxref=Genbank:NP_628934.1,GeneID:1100217;Name=NP_628934.1;Note=SCD63.08%2C possible Ser/Thr protein kinase%2C len: 979 aa%3B similar to TR:O83032 (EMBL:AB16932) Streptomyces coelicolor protein Ser/Thr kinase PhaD%2C 598 aa%3B blastp scores: Sum P(2) %3D 2.4e-24 Identities %3D 123/403 (30%25)%2C Positives %3D 159/403 (39%25). Contains 2x Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and possible hydrophobic membrane spanning region. High content in alanine%2C glycine and proline residues;gbkey=CDS;gene=SCD63.08;product=Ser/Thr protein kinase;protein_id=NP_628934.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5191743	5191994	.	+	.	ID=id6062;Dbxref=GeneID:1100217;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 18.20%2C E-value 0.00057;gbkey=misc_feature;gene=SCD63.08
NC_003888.3	RefSeq	sequence_feature	5193237	5193452	.	+	.	ID=id6063;Dbxref=GeneID:1100217;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 23.30%2C E-value 2.3e-05;gbkey=misc_feature;gene=SCD63.08
NC_003888.3	RefSeq	sequence_feature	5193242	5193440	.	+	.	ID=id6064;Dbxref=GeneID:1100217;Note=BlastN hit to EMBL:AB016932 Streptomyces coelicolor gene for protein Ser/Thr kinase pkaD%2C complete cds.;gbkey=misc_feature;gene=SCD63.08
NC_003888.3	RefSeq	sequence_feature	5194108	5196469	.	+	.	ID=id6065;Note=previously sequenced fragment EMBL:AB016932 Streptomyces coelicolor gene for protein Ser/Thr kinase%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5194501	5196300	.	+	.	ID=gene4829;Dbxref=GeneID:1100218;Name=pkaD;gbkey=Gene;gene=pkaD;gene_biotype=protein_coding;gene_synonym=pkaD,SCD63.09;locus_tag=SCO4777
NC_003888.3	RefSeq	CDS	5194501	5196300	.	+	0	ID=cds4729;Parent=gene4829;Dbxref=Genbank:NP_628935.1,GeneID:1100218;Name=NP_628935.1;Note=SCD63.09%2C pkaD%2C protein Ser/Thr kinase%2C len: 599 aa%3B identical to previously sequenced TR:O83032 (EMBL:AB016932) Streptomyces coelicolor protein Ser/Thr kinase PkaD. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature and possible hydrophobic membrane spanning region;gbkey=CDS;gene=pkaD;product=protein Ser/Thr kinase;protein_id=NP_628935.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5194537	5195289	.	+	.	ID=id6066;Dbxref=GeneID:1100218;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 173.70%2C E-value 3.1e-48;gbkey=misc_feature;gene=pkaD
NC_003888.3	RefSeq	sequence_feature	5194555	5194626	.	+	.	ID=id6067;Dbxref=GeneID:1100218;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=pkaD
NC_003888.3	RefSeq	sequence_feature	5194906	5194944	.	+	.	ID=id6068;Dbxref=GeneID:1100218;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaD
NC_003888.3	RefSeq	gene	5196394	5197536	.	+	.	ID=gene4830;Dbxref=GeneID:1100219;Name=pkaI;gbkey=Gene;gene=pkaI;gene_biotype=protein_coding;gene_synonym=pkaI,SCD63.10;locus_tag=SCO4778
NC_003888.3	RefSeq	CDS	5196394	5197536	.	+	0	ID=cds4730;Parent=gene4830;Dbxref=Genbank:NP_628936.1,GeneID:1100219;Name=NP_628936.1;Note=SCD63.10%2C pkaI%2C Ser/Thr protein kinase%2C len: 380 aa%3B similar to TR:CAB50939 (EMBL:AL096849) Streptomyces coelicolor  protein Ser/Thr kinase SCI11.13%2C 550 aa%3B fasta scores: opt: 932 z-score: 751.0 E(): 0%3B 45.0%25 identity in 416 aa overlap and to SW:PKAA_STRCO (EMBL:D86821) Streptomyces coelicolor Ser/Thr protein kinase PkaA (EC 2.7.1.-)%2C 543 aa%3B fasta scores: opt: 557 z-score: 454.6 E(): 6.8e-18%3B 33.9%25 identity in 386 aa overlap. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and possible hydrophobic membrane spanning region;gbkey=CDS;gene=pkaI;product=Ser/Thr protein kinase;protein_id=NP_628936.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5196445	5197197	.	+	.	ID=id6069;Dbxref=GeneID:1100219;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 214.20%2C E-value 2e-60;gbkey=misc_feature;gene=pkaI
NC_003888.3	RefSeq	sequence_feature	5196463	5196534	.	+	.	ID=id6070;Dbxref=GeneID:1100219;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=pkaI
NC_003888.3	RefSeq	sequence_feature	5196799	5197208	.	+	.	ID=id6071;Dbxref=GeneID:1100219;Note=BlastN hit to EMBL:AB016932 Streptomyces coelicolor gene for protein Ser/Thr kinase%2C complete cds.;gbkey=misc_feature;gene=pkaI
NC_003888.3	RefSeq	sequence_feature	5196814	5196852	.	+	.	ID=id6072;Dbxref=GeneID:1100219;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaI
NC_003888.3	RefSeq	repeat_region	5197423	5197467	.	+	.	ID=id6073;Dbxref=GeneID:1100219;Note=perfect repeat 3x (PTSTP);gbkey=repeat_region;gene=pkaI
NC_003888.3	RefSeq	gene	5197710	5199356	.	+	.	ID=gene4831;Dbxref=GeneID:1100220;Name=pkaJ;gbkey=Gene;gene=pkaJ;gene_biotype=protein_coding;gene_synonym=pkaJ,SCD63.11;locus_tag=SCO4779
NC_003888.3	RefSeq	CDS	5197710	5199356	.	+	0	ID=cds4731;Parent=gene4831;Dbxref=Genbank:NP_628937.1,GeneID:1100220;Name=NP_628937.1;Note=SCD63.11%2C pkaJ%2C Ser/Thr protein kinase%2C len: 548 aa%3B N-terminal region similar to TR:CAB50939 (EMBL:AL096849) Streptomyces coelicolor protein Ser/Thr kinase SCI11.13%2C 550 aa%3B fasta scores: opt: 1006 z-score: 815.3 E(): 0%3B 56.9%25 identity in 297 aa overlap and to TR:AAD47061 (EMBL:AF159501) Myxococcus xanthus Pkn4%2C 643 aa%3B fasta scores: opt: 639 z-score: 521.3 E(): 1.4e-21%3B 43.6%25 identity in 273 aa overlap and C-terminal similar to TR:Q9WTP4 (EMBL:AB019577) Mus musculus UNC-51-like kinase (ULK) 2%2C Ulk2%2C 1037 aa%3B blastp socres: Sum P(2) %3D 2.6e-24 Identities %3D 89/289 (30%25)%2C Positives %3D 144/289 (49%25). Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature;gbkey=CDS;gene=pkaJ;product=Ser/Thr protein kinase;protein_id=NP_628937.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5197884	5198636	.	+	.	ID=id6074;Dbxref=GeneID:1100220;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 213.00%2C E-value 4.5e-60;gbkey=misc_feature;gene=pkaJ
NC_003888.3	RefSeq	sequence_feature	5197902	5197973	.	+	.	ID=id6075;Dbxref=GeneID:1100220;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=pkaJ
NC_003888.3	RefSeq	sequence_feature	5198234	5198527	.	+	.	ID=id6076;Dbxref=GeneID:1100220;Note=BlastN hit to EMBL:AB016932 Streptomyces coelicolor gene for protein Ser/Thr kinase%2C complete cds.;gbkey=misc_feature;gene=pkaJ
NC_003888.3	RefSeq	sequence_feature	5198250	5198288	.	+	.	ID=id6077;Dbxref=GeneID:1100220;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=pkaJ
NC_003888.3	RefSeq	gene	5199496	5201109	.	+	.	ID=gene4832;Dbxref=GeneID:1100221;Name=gabD2;gbkey=Gene;gene=gabD2;gene_biotype=protein_coding;gene_synonym=SCD63.12;locus_tag=SCO4780
NC_003888.3	RefSeq	CDS	5199496	5201109	.	+	0	ID=cds4732;Parent=gene4832;Dbxref=Genbank:NP_628938.1,GeneID:1100221;Name=NP_628938.1;Note=NADP-dependent semialdehyde dehydrogenase%3B part of alternative pathway from alpha-ketoglutarate to succinate;gbkey=CDS;gene=gabD2;product=succinic semialdehyde dehydrogenase;protein_id=NP_628938.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5199610	5201010	.	+	.	ID=id6078;Dbxref=GeneID:1100221;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 473.50%2C E-value 1.7e-138;gbkey=misc_feature;gene=gabD2
NC_003888.3	RefSeq	sequence_feature	5200312	5200335	.	+	.	ID=id6079;Dbxref=GeneID:1100221;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=gabD2
NC_003888.3	RefSeq	ribosome_entry_site	5201201	5201204	.	+	.	ID=id6080;gbkey=RBS
NC_003888.3	RefSeq	gene	5201210	5203018	.	+	.	ID=gene4833;Dbxref=GeneID:1100222;Name=SCD63.13;gbkey=Gene;gene=SCD63.13;gene_biotype=protein_coding;gene_synonym=SCD63.13;locus_tag=SCO4781
NC_003888.3	RefSeq	CDS	5201210	5203018	.	+	0	ID=cds4733;Parent=gene4833;Dbxref=Genbank:NP_628939.1,GeneID:1100222;Name=NP_628939.1;Note=SCD63.13%2C possible cholesterol oxidase%2C len: 602 aa%3B similar to TR:Q59530 (EMBL:U00015) Mycobacterium leprae probable cholesterol oxidase precursor (EC 1.1.3.6) ChoD%2C 585 aa%3B fasta scores: opt: 1114 z-score: 1181.0 E(): 0%3B 60.5%25 identity in 583 aa overlapand to SW:CHOD_BREST (EMBL:D00712) Brevibacterium sterolicum cholesterol oxidase precursor (EC 1.1.3.6) ChoD%2C 552 aa%3B fasta scores: opt: 228 z-score: 244.5 E(): 3.4e-06%3B 26.9%25 identity in 576 aa overlap;gbkey=CDS;gene=SCD63.13;product=cholesterol oxidase;protein_id=NP_628939.1;transl_table=11
NC_003888.3	RefSeq	gene	5203137	5203796	.	-	.	ID=gene4834;Dbxref=GeneID:1100223;Name=SCD63.14c;gbkey=Gene;gene=SCD63.14c;gene_biotype=protein_coding;gene_synonym=SCD63.14c;locus_tag=SCO4782
NC_003888.3	RefSeq	CDS	5203137	5203796	.	-	0	ID=cds4734;Parent=gene4834;Dbxref=Genbank:NP_628940.1,GeneID:1100223;Name=NP_628940.1;Note=SCD63.14c%2C possible integral membrane protein%2C len: 219 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD63.14c;product=hypothetical protein;protein_id=NP_628940.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5203836	5203839	.	+	.	ID=id6081;gbkey=RBS
NC_003888.3	RefSeq	gene	5203840	5204163	.	+	.	ID=gene4835;Dbxref=GeneID:1100224;Name=SCD63.15;gbkey=Gene;gene=SCD63.15;gene_biotype=protein_coding;gene_synonym=SCD63.15;locus_tag=SCO4783
NC_003888.3	RefSeq	CDS	5203840	5204163	.	+	0	ID=cds4735;Parent=gene4835;Dbxref=Genbank:NP_628941.1,GeneID:1100224;Name=NP_628941.1;Note=SCD63.15%2C unknown%2C len: 107 aa;gbkey=CDS;gene=SCD63.15;product=hypothetical protein;protein_id=NP_628941.1;transl_table=11
NC_003888.3	RefSeq	gene	5204510	5204842	.	-	.	ID=gene4836;Dbxref=GeneID:1100225;Name=SCD63.16c;gbkey=Gene;gene=SCD63.16c;gene_biotype=protein_coding;gene_synonym=SCD63.16c;locus_tag=SCO4784
NC_003888.3	RefSeq	CDS	5204510	5204842	.	-	0	ID=cds4736;Parent=gene4836;Dbxref=Genbank:NP_628942.1,GeneID:1100225;Name=NP_628942.1;Note=SCD63.16c%2C hypothetical protein%2C len: 110 aa%3B similar to SW:Y948_MYCTU (EMBL:Z79700) Mycobacterium tuberculosis hypothetical 11.8 kD protein RV0984c%2C MTCY10D7.26%2C 105 aa%3B fasta scores: opt: 195 z-score: 252.8 E(): 1.2e-06%3B 47.2%25 identity in 72 aa overlap;gbkey=CDS;gene=SCD63.16c;product=hypothetical protein;protein_id=NP_628942.1;transl_table=11
NC_003888.3	RefSeq	gene	5205166	5206746	.	+	.	ID=gene4837;Dbxref=GeneID:1100226;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;gene_synonym=SCD63.17;locus_tag=SCO4785
NC_003888.3	RefSeq	CDS	5205166	5206746	.	+	0	ID=cds4737;Parent=gene4837;Dbxref=Genbank:NP_628943.1,GeneID:1100226;Name=NP_628943.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase;protein_id=NP_628943.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5205208	5205756	.	+	.	ID=id6082;Dbxref=GeneID:1100226;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 183.00%2C E-value 4.7e-51;gbkey=misc_feature;gene=guaA
NC_003888.3	RefSeq	sequence_feature	5205418	5205453	.	+	.	ID=id6083;Dbxref=GeneID:1100226;Note=PS00442 Glutamine amidotransferases class-I active site;gbkey=misc_feature;gene=guaA
NC_003888.3	RefSeq	sequence_feature	5206432	5206743	.	+	.	ID=id6084;Dbxref=GeneID:1100226;Note=Pfam match to entry PF00958 GMP_synt_C%2C GMP synthase C terminal domain%2C score 219.90%2C E-value 3.7e-62;gbkey=misc_feature;gene=guaA
NC_003888.3	RefSeq	gene	5206750	5207217	.	-	.	ID=gene4838;Dbxref=GeneID:1100227;Name=SCD63.18c;gbkey=Gene;gene=SCD63.18c;gene_biotype=protein_coding;gene_synonym=SCD63.18c;locus_tag=SCO4786
NC_003888.3	RefSeq	CDS	5206750	5207217	.	-	0	ID=cds4738;Parent=gene4838;Dbxref=Genbank:NP_628944.1,GeneID:1100227;Name=NP_628944.1;Note=SCD63.18c%2C unknown%2C len: 155 aa;gbkey=CDS;gene=SCD63.18c;product=hypothetical protein;protein_id=NP_628944.1;transl_table=11
NC_003888.3	RefSeq	gene	5207363	5208166	.	+	.	ID=gene4839;Dbxref=GeneID:1100228;Name=SCD63.19;gbkey=Gene;gene=SCD63.19;gene_biotype=protein_coding;gene_synonym=SCD63.19;locus_tag=SCO4787
NC_003888.3	RefSeq	CDS	5207363	5208166	.	+	0	ID=cds4739;Parent=gene4839;Dbxref=Genbank:NP_628945.1,GeneID:1100228;Name=NP_628945.1;Note=SCD63.19%2C possible aldolase%2C len: 267 aa%3B similar to SW:ADDA_HUMAN (EMBL:X58141) Homo sapiens erythrocyte adducin alpha subunit AddA%2C 737 aa%3B fasta scores: opt: 422 z-score: 487.2 E(): 1e-19%3B 35.4%25 identity in 240 aa overlap . Contains Pfam match to entry PF00596 Aldolase_II%2C Class II Aldolase and Adducin N-terminal domain;gbkey=CDS;gene=SCD63.19;product=hypothetical protein;protein_id=NP_628945.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5207459	5208085	.	+	.	ID=id6085;Dbxref=GeneID:1100228;Note=Pfam match to entry PF00596 Aldolase_II%2C Class II Aldolase and Adducin N-terminal domain.%2C score 85.80%2C E-value 8.9e-22;gbkey=misc_feature;gene=SCD63.19
NC_003888.3	RefSeq	gene	5208328	5209623	.	+	.	ID=gene4840;Dbxref=GeneID:1100229;Name=SCD63.20;gbkey=Gene;gene=SCD63.20;gene_biotype=protein_coding;gene_synonym=SCD63.20;locus_tag=SCO4788
NC_003888.3	RefSeq	CDS	5208328	5209623	.	+	0	ID=cds4740;Parent=gene4840;Dbxref=Genbank:NP_628946.1,GeneID:1100229;Name=NP_628946.1;Note=SCD63.20%2C possible integral membrane protein%2C len: 431 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD63.20;product=ntegral membrane protein;protein_id=NP_628946.1;transl_table=11
NC_003888.3	RefSeq	gene	5209775	5210290	.	+	.	ID=gene4841;Dbxref=GeneID:1100230;Name=SCD63.21;gbkey=Gene;gene=SCD63.21;gene_biotype=protein_coding;gene_synonym=SCD63.21;locus_tag=SCO4789
NC_003888.3	RefSeq	CDS	5209775	5210290	.	+	0	ID=cds4741;Parent=gene4841;Dbxref=Genbank:NP_628947.1,GeneID:1100230;Name=NP_628947.1;Note=SCD63.21%2C possible integral membrane protein%2C len: 171 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD63.21;product=hypothetical protein;protein_id=NP_628947.1;transl_table=11
NC_003888.3	RefSeq	gene	5210501	5211922	.	-	.	ID=gene4842;Dbxref=GeneID:1100231;Name=SCD63.22c;gbkey=Gene;gene=SCD63.22c;gene_biotype=protein_coding;gene_synonym=SCD63.22c,SCD63A.01c;locus_tag=SCO4790
NC_003888.3	RefSeq	CDS	5210501	5211922	.	-	0	ID=cds4742;Parent=gene4842;Dbxref=Genbank:NP_733647.1,GeneID:1100231;Name=NP_733647.1;Note=SCD63A.01c%2C possible integral membrane protein (fragment)%2C len: >35 aa~SCD63.22c%2C possible integral membrane protein (fragment)%2C len: 171 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD63.22c;product=hypothetical protein;protein_id=NP_733647.1;transl_table=11
NC_003888.3	RefSeq	gene	5212113	5213405	.	+	.	ID=gene4843;Dbxref=GeneID:1100232;Name=SCD63A.02;gbkey=Gene;gene=SCD63A.02;gene_biotype=protein_coding;gene_synonym=SCD63A.02;locus_tag=SCO4791
NC_003888.3	RefSeq	CDS	5212113	5213405	.	+	0	ID=cds4743;Parent=gene4843;Dbxref=Genbank:NP_628948.1,GeneID:1100232;Name=NP_628948.1;Note=SCD63A.02%2C possible two-component system sensor kinase%2C len: 430 aa%3B C-terminal domain similar to TR:CAB51969 (EMBL:AL109661) Streptomyces coelicolor two-component system sensor kinase SC6E10.15c%2C 413 aa%3B fasta scores: opt: 168 z-score: 198.3 E(): 0.0014%3B 32.7%25 identity in 248 aa overlap. Contains possible hydrophobic membrane regions in N-terminal domain;gbkey=CDS;gene=SCD63A.02;product=two-component system sensor kinase;protein_id=NP_628948.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5213390	5213394	.	+	.	ID=id6086;Dbxref=GeneID:1100232;gbkey=RBS;gene=SCD63A.02
NC_003888.3	RefSeq	gene	5213402	5214157	.	+	.	ID=gene4844;Dbxref=GeneID:1100233;Name=SCD63A.03;gbkey=Gene;gene=SCD63A.03;gene_biotype=protein_coding;gene_synonym=SCD63A.03;locus_tag=SCO4792
NC_003888.3	RefSeq	CDS	5213402	5214157	.	+	0	ID=cds4744;Parent=gene4844;Dbxref=Genbank:NP_628949.1,GeneID:1100233;Name=NP_628949.1;Note=SCD63A.03%2C probable two-component system DNA-binding response regulator%2C len: 251 aa%3B similar to SW:NARL_ECOLI (EMBL:X13360) Escherichia coli nitrate/nitrite response regulator protein NarL%2C 216 aa%3B fasta scores: opt: 428 z-score: 490.1 E(): 7.8e-20%3B 34.1%25 identity in 214 aa overlap and to TR:CAB51968 (EMBL:AL109661) Streptomyces coelicolor  two-component system regulator SC6E10.14c%2C 215 aa%3B fasta scores: opt: 517 z-score: 472.3 E(): 9.4e-21%3B 44.3%25 identity in 219 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Contains also possible helix-turn-helix motif at residues 206..227 (+2.85 SD);gbkey=CDS;gene=SCD63A.03;product=two-component system DNA-binding response regulator;protein_id=NP_628949.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5213504	5213863	.	+	.	ID=id6087;Dbxref=GeneID:1100233;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 55.50%2C E-value 1.2e-12;gbkey=misc_feature;gene=SCD63A.03
NC_003888.3	RefSeq	sequence_feature	5213963	5214154	.	+	.	ID=id6088;Dbxref=GeneID:1100233;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 73.60%2C E-value 4.2e-18;gbkey=misc_feature;gene=SCD63A.03
NC_003888.3	RefSeq	sequence_feature	5214014	5214097	.	+	.	ID=id6089;Dbxref=GeneID:1100233;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCD63A.03
NC_003888.3	RefSeq	gene	5214259	5215302	.	-	.	ID=gene4845;Dbxref=GeneID:1100234;Name=SCD63A.04c;gbkey=Gene;gene=SCD63A.04c;gene_biotype=protein_coding;gene_synonym=SCD63A.04c;locus_tag=SCO4793
NC_003888.3	RefSeq	CDS	5214259	5215302	.	-	0	ID=cds4745;Parent=gene4845;Dbxref=Genbank:NP_628950.1,GeneID:1100234;Name=NP_628950.1;Note=SCD63A.04c%2C probable hypothetical protein%2C len: 347 aa%3B similar to TR:Q9XAQ3 (EMBL:AL078618) Streptomyces coelicolor SCD16A.22%2C 277 aa%3B fasta scores: opt: 409 z-score: 418.8 E(): 7.3e-16%3B 34.8%25 identity in 250 aa overlap%2C to TR:Q9X7Z5 (EMBL:AL049497) Streptomyces coelicolor hypothetical protein SC6G10.09c%2C 347 aa%3B fasta scores: opt: 928 z-score: 800.9 E(): 0%3B 44.2%25 identity in 353 aa overlap and to Streptomyces coelicolor SCD63A.07c%2C 398 aa. Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family and possible N-terminal region signal peptide sequence. Contains also possible colied-coil region at aprox. residues 58..98;gbkey=CDS;gene=SCD63A.04c;product=hypothetical protein;protein_id=NP_628950.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5214265	5214579	.	-	.	ID=id6090;Dbxref=GeneID:1100234;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 152.50%2C E-value 7.2e-42;gbkey=misc_feature;gene=SCD63A.04c
NC_003888.3	RefSeq	gene	5215428	5215964	.	+	.	ID=gene4846;Dbxref=GeneID:1100235;Name=SCD63A.05;gbkey=Gene;gene=SCD63A.05;gene_biotype=protein_coding;gene_synonym=SCD63A.05;locus_tag=SCO4794
NC_003888.3	RefSeq	CDS	5215428	5215964	.	+	0	ID=cds4746;Parent=gene4846;Dbxref=Genbank:NP_628951.1,GeneID:1100235;Name=NP_628951.1;Note=SCD63A.05%2C possible integral membrane protein%2C len: 178 aa. Contains possible hydrophobic membrane spanning regions and a TTA leucine codon (codon 57)%2C possible target for bldA regulation;gbkey=CDS;gene=SCD63A.05;product=hypothetical protein;protein_id=NP_628951.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5215596	5215598	.	+	.	ID=id6091;Dbxref=GeneID:1100235;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCD63A.05
NC_003888.3	RefSeq	gene	5215942	5216958	.	-	.	ID=gene4847;Dbxref=GeneID:1100236;Name=SCD63A.06c;gbkey=Gene;gene=SCD63A.06c;gene_biotype=protein_coding;gene_synonym=SCD63A.06c;locus_tag=SCO4795
NC_003888.3	RefSeq	CDS	5215942	5216958	.	-	0	ID=cds4747;Parent=gene4847;Dbxref=Genbank:NP_628952.1,GeneID:1100236;Name=NP_628952.1;Note=SCD63A.06c%2C possible integral membrane protein%2C len: 338 aa%3B similar to TR:O88074 (EMBL:AL031541) Streptomyces coelicolor  integral membrane protein SCI35.39%2C394 aa%3B fasta scores: opt: 142 z-score: 173.6 E(): 0.033%3B 28.0%25 identity in 311 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD63A.06c;product=hypothetical protein;protein_id=NP_628952.1;transl_table=11
NC_003888.3	RefSeq	gene	5216985	5218181	.	-	.	ID=gene4848;Dbxref=GeneID:1100237;Name=SCD63A.07c;gbkey=Gene;gene=SCD63A.07c;gene_biotype=protein_coding;gene_synonym=SCD63A.07c;locus_tag=SCO4796
NC_003888.3	RefSeq	CDS	5216985	5218181	.	-	0	ID=cds4748;Parent=gene4848;Dbxref=Genbank:NP_628953.1,GeneID:1100237;Name=NP_628953.1;Note=SCD63A.07c%2C possible hypothetical protein%2C len: 398 aa%3B similar to TR:Q9XAQ3 (EMBL:AL078618) Streptomyces coelicolor hypothetical protein SCD16A.22%2C 277 aa%3B fasta scores: opt: 479 z-score: 430.6 E(): 1.6e-16%3B 39.1%25 identity in 233 aa overlap%2C to TR:Q9X7Z5 (EMBL:AL049497) Streptomyces coelicolor hypothetical protein SC6G10.09c%2C 347 aa%3B fasta scores: opt: 576 z-score: 513.3 E(): 4e-21%3B 41.5%25 identity in 395 aa overlap and to Streptomyces coelicolor SCD63A.04c%2C 347 aa. Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family. Contains also possible coiled-coil regions at aprox. residues 58..98 and 176..242 and possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCD63A.07c;product=hypothetical protein;protein_id=NP_628953.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5216994	5217314	.	-	.	ID=id6092;Dbxref=GeneID:1100237;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 125.10%2C E-value 1.3e-33;gbkey=misc_feature;gene=SCD63A.07c
NC_003888.3	RefSeq	ribosome_entry_site	5218190	5218193	.	-	.	ID=id6093;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5218616	5218620	.	+	.	ID=id6094;gbkey=RBS
NC_003888.3	RefSeq	gene	5218624	5221119	.	+	.	ID=gene4849;Dbxref=GeneID:1100238;Name=SCD63A.08;gbkey=Gene;gene=SCD63A.08;gene_biotype=protein_coding;gene_synonym=SCD63A.08;locus_tag=SCO4797
NC_003888.3	RefSeq	CDS	5218624	5221119	.	+	0	ID=cds4749;Parent=gene4849;Dbxref=Genbank:NP_628954.1,GeneID:1100238;Name=NP_628954.1;Note=SCD63A.08%2C probable ATP-dependent DNA helicase II%2C len: 831 aa%3B similar to TR:P73465 (EMBL:D90906) Synechocystis sp. DNA helicase II UvrD%2C 793 aa%3B fasta scores: opt: 1417 z-score: 1459.4 E(): 0%3B 40.4%25 identity in 817 aa overlap and to SW:REP_ECOLI (EMBL:M87049) Escherichia coli ATP-dependent DNA helicase Rep%2C 673 aa%3B fasta scores: opt: 824 z-score: 849.5 E(): 0%3B 37.8%25 identity in 661 aa overlap. Contains Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCD63A.08;product=ATP-dependent DNA helicase II;protein_id=NP_628954.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5218843	5220309	.	+	.	ID=id6095;Dbxref=GeneID:1100238;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 464.60%2C E-value 8e-136;gbkey=misc_feature;gene=SCD63A.08
NC_003888.3	RefSeq	sequence_feature	5218897	5218920	.	+	.	ID=id6096;Dbxref=GeneID:1100238;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD63A.08
NC_003888.3	RefSeq	gene	5221209	5222906	.	-	.	ID=gene4850;Dbxref=GeneID:1100239;Name=SCD63A.09c;gbkey=Gene;gene=SCD63A.09c;gene_biotype=protein_coding;gene_synonym=SCD63A.09c;locus_tag=SCO4798
NC_003888.3	RefSeq	CDS	5221209	5222906	.	-	0	ID=cds4750;Parent=gene4850;Dbxref=Genbank:NP_628955.1,GeneID:1100239;Name=NP_628955.1;Note=SCD63A.09c%2C possible peptidase%2C len: 565 aa%3B C-terminal region similar to SW:LSTP_STAST (EMBL:X06121) Staphylococcus staphylolyticus lysostaphin precursor (EC 3.4.24.75) Lss%2C 480 aa%3B fasta scores: opt: 299 z-score: 293.2 E(): 7.2e-09%3B 25.0%25 identity in 368 aa overlap and to TR:O50513 (EMBL:AL009204) Streptomyces coelicolor hypothetical protein SC9B10.06%2C 250 aa%3B fasta scores: opt: 458 z-score: 352.7 E(): 4.3e-14%3B 41.6%25 identity in 231 aa overlap. Contains Pfam match to entry PF01551 Peptidase_M37%2C Peptidase family M23/M37;gbkey=CDS;gene=SCD63A.09c;product=peptidase;protein_id=NP_628955.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5221239	5221487	.	-	.	ID=id6097;Dbxref=GeneID:1100239;Note=Pfam match to entry PF01551 Peptidase_M37%2C Peptidase family M23/M37%2C score 115.00%2C E-value 1.5e-30;gbkey=misc_feature;gene=SCD63A.09c
NC_003888.3	RefSeq	gene	5223103	5224098	.	-	.	ID=gene4851;Dbxref=GeneID:1100240;Name=SCD63A.10c;gbkey=Gene;gene=SCD63A.10c;gene_biotype=protein_coding;gene_synonym=SCD63A.10c;locus_tag=SCO4799
NC_003888.3	RefSeq	CDS	5223103	5224098	.	-	0	ID=cds4751;Parent=gene4851;Dbxref=Genbank:NP_628956.1,GeneID:1100240;Name=NP_628956.1;Note=SCD63A.10c%2C possible  lipase%2C len: 331 aa%3B similar to SW:LIP_BACSU (EMBL:M74010) Bacillus subtilis lipase precursor (EC 3.1.1.3) LipA%2C 212 aa%3B fasta scores: opt: 188 z-score: 190.5 E(): 0.0038%3B 26.5%25 identity in 211 aa overlap and to TR:AAF11628 (EMBL:AE002044) Deinococcus radiodurans lipase%2C %2C 237 aa%3B fasta scores: opt: 309 z-score: 302.6 E(): 2.2e-09%3B 32.0%25 identity in 200 aa overlap. Contains match to Prosite entry PS00120 Lipases%2C serine active site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD63A.10c;product=lipase;protein_id=NP_628956.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5223535	5223564	.	-	.	ID=id6098;Dbxref=GeneID:1100240;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=SCD63A.10c
NC_003888.3	RefSeq	ribosome_entry_site	5224106	5224111	.	-	.	ID=id6099;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5224483	5224486	.	+	.	ID=id6100;gbkey=RBS
NC_003888.3	RefSeq	gene	5224492	5224908	.	+	.	ID=gene4852;Dbxref=GeneID:1100241;Name=icmB;gbkey=Gene;gene=icmB;gene_biotype=protein_coding;gene_synonym=icmB,SCD63A.11;locus_tag=SCO4800
NC_003888.3	RefSeq	CDS	5224492	5224908	.	+	0	ID=cds4752;Parent=gene4852;Dbxref=Genbank:NP_628957.1,GeneID:1100241;Name=NP_628957.1;Note=SCD63A.11%2C icmB%2C isobutyryl CoA mutase%2C small subunit%2C len: 138 aa%3B almost identical to TR:CAB59633 (EMBL:AJ246005) Streptomyces cinnamonensis isobutyryl CoA mutase%2C small subunit (EC 5.4.99.13) IcmB%2C 136 aa%3B fasta scores: opt: 803 z-score: 972.5 E(): 0%3B 92.5%25 identity in 134 aa overlap and highly similar to TR:CAB71846 (EMBL:138667) Streptomyces coelicolor probable isobutyryl-CoA mutase%2C small subunit SC3D9.01%2C 159 aa%3B fasta scores: opt: 594 z-score: 628.1 E(): 2e-29%3B 70.6%25 identity in 126 aa overlap;gbkey=CDS;gene=icmB;product=isobutyryl-CoA mutase%2C small subunit;protein_id=NP_628957.1;transl_table=11
NC_003888.3	RefSeq	gene	5225006	5226826	.	-	.	ID=gene4853;Dbxref=GeneID:1100242;Name=SCD63A.12c;gbkey=Gene;gene=SCD63A.12c;gene_biotype=protein_coding;gene_synonym=SCD63A.12c;locus_tag=SCO4801
NC_003888.3	RefSeq	CDS	5225006	5226826	.	-	0	ID=cds4753;Parent=gene4853;Dbxref=Genbank:NP_628958.1,GeneID:1100242;Name=NP_628958.1;Note=SCD63A.12c%2C unknown%2C len: 606 aa. High content in alanine amino acid residues;gbkey=CDS;gene=SCD63A.12c;product=hypothetical protein;protein_id=NP_628958.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5226836	5226839	.	-	.	ID=id6101;gbkey=RBS
NC_003888.3	RefSeq	gene	5226862	5228001	.	-	.	ID=gene4854;Dbxref=GeneID:1100243;Name=SCD63A.13c;gbkey=Gene;gene=SCD63A.13c;gene_biotype=protein_coding;gene_synonym=SCD63A.13c;locus_tag=SCO4802
NC_003888.3	RefSeq	CDS	5226862	5228001	.	-	0	ID=cds4754;Parent=gene4854;Dbxref=Genbank:NP_628959.1,GeneID:1100243;Name=NP_628959.1;Note=SCD63A.13c%2C unknown%2C len: 379 aa;gbkey=CDS;gene=SCD63A.13c;product=hypothetical protein;protein_id=NP_628959.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5228070	5228073	.	+	.	ID=id6102;gbkey=RBS
NC_003888.3	RefSeq	gene	5228085	5229206	.	+	.	ID=gene4855;Dbxref=GeneID:1100244;Name=SCD63A.14;gbkey=Gene;gene=SCD63A.14;gene_biotype=protein_coding;gene_synonym=SCD63A.14;locus_tag=SCO4803
NC_003888.3	RefSeq	CDS	5228085	5229206	.	+	0	ID=cds4755;Parent=gene4855;Dbxref=Genbank:NP_628960.1,GeneID:1100244;Name=NP_628960.1;Note=SCD63A.14%2C conserved hypothetical protein%2C len: 373 aa%3B similar to TR:CAB61595 (EMBL:AL133210) Streptomyces coelicolor hypothetical 41.5 kD protein SCG11A.14%2C 389 aa%3B fasta scores: opt: 774 z-score: 864.5 E(): 0%3B 46.5%25 identity in 376 aa overlap and to SW:YEHL_ECOLI (EMBL:U00007) Escherichia coli hypothetical 42.4 kD protein in MolR-BglX intergenic region YehL%2C 384 aa%3B fasta scores: opt: 771 z-score: 861.2 E(): 0%3B 41.2%25 identity in 359 aa overlap;gbkey=CDS;gene=SCD63A.14;product=hypothetical protein;protein_id=NP_628960.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5229297	5229300	.	+	.	ID=id6103;gbkey=RBS
NC_003888.3	RefSeq	gene	5229309	5231756	.	+	.	ID=gene4856;Dbxref=GeneID:1100245;Name=SCD63A.15;gbkey=Gene;gene=SCD63A.15;gene_biotype=protein_coding;gene_synonym=SCD63A.15;locus_tag=SCO4804
NC_003888.3	RefSeq	CDS	5229309	5231756	.	+	0	ID=cds4756;Parent=gene4856;Dbxref=Genbank:NP_628961.1,GeneID:1100245;Name=NP_628961.1;Note=SCD63A.15%2C hypothetical protein%2C len: 815 aa%3B similar to TR:CAB61596 (EMBL:AL133210) Streptomyces coelicolor hypothetical 135.7 kD protein SCG11A.15%2C 1320 aa%3B fasta scores: opt: 340 z-score: 332.5 E(): 4.6e-11%3B 30.4%25 identity in 883 aa overlap;gbkey=CDS;gene=SCD63A.15;product=hypothetical protein;protein_id=NP_628961.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5231817	5231897	.	+	.	ID=id6104;Note=7x degenerate repeat: CGG(A/G)GCCCA(C/T)G(A/G);gbkey=repeat_region
NC_003888.3	RefSeq	gene	5231927	5233081	.	+	.	ID=gene4857;Dbxref=GeneID:1100246;Name=SCD63A.16;gbkey=Gene;gene=SCD63A.16;gene_biotype=protein_coding;gene_synonym=SCD63A.16;locus_tag=SCO4805
NC_003888.3	RefSeq	CDS	5231927	5233081	.	+	0	ID=cds4757;Parent=gene4857;Dbxref=Genbank:NP_628962.1,GeneID:1100246;Name=NP_628962.1;Note=SCD63A.16%2C hypothetical protein%2C len: 348 aa%3B similar to SW:YEHP_ECOLI (EMBL:) Escherichia coli hypothetical 42.1 kD protein in MolR-BglX intergenic region YehP%2C 378 aa%3B fasta scores: opt: 721 z-score: 816.7 E(): 0%3B 35.7%25 identity in 378 aa overlap;gbkey=CDS;gene=SCD63A.16;product=hypothetical protein;protein_id=NP_628962.1;transl_table=11
NC_003888.3	RefSeq	gene	5233252	5234196	.	+	.	ID=gene4858;Dbxref=GeneID:1100247;Name=SCD63A.17;gbkey=Gene;gene=SCD63A.17;gene_biotype=protein_coding;gene_synonym=SCD63A.17;locus_tag=SCO4806
NC_003888.3	RefSeq	CDS	5233252	5234196	.	+	0	ID=cds4758;Parent=gene4858;Dbxref=Genbank:NP_628963.1,GeneID:1100247;Name=NP_628963.1;Note=SCD63A.17%2C possible hypothetical protein%2C len: 314 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCD63A.17;product=hypothetical protein;protein_id=NP_628963.1;transl_table=11
NC_003888.3	RefSeq	gene	5234328	5234783	.	+	.	ID=gene4859;Dbxref=GeneID:1100248;Name=SCD63A.18;gbkey=Gene;gene=SCD63A.18;gene_biotype=protein_coding;gene_synonym=SCD63A.18;locus_tag=SCO4807
NC_003888.3	RefSeq	CDS	5234328	5234783	.	+	0	ID=cds4759;Parent=gene4859;Dbxref=Genbank:NP_628964.1,GeneID:1100248;Name=NP_628964.1;Note=SCD63A.18%2C unknown%2C len: 151 aa. Doubtful CDS;gbkey=CDS;gene=SCD63A.18;product=hypothetical protein;protein_id=NP_628964.1;transl_table=11
NC_003888.3	RefSeq	gene	5234993	5236177	.	+	.	ID=gene4860;Dbxref=GeneID:1100249;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;gene_synonym=SCD63A.19;locus_tag=SCO4808
NC_003888.3	RefSeq	CDS	5234993	5236177	.	+	0	ID=cds4760;Parent=gene4860;Dbxref=Genbank:NP_628965.1,GeneID:1100249;Name=NP_628965.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA synthetase subunit beta;protein_id=NP_628965.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5235707	5236093	.	+	.	ID=id6105;Dbxref=GeneID:1100249;Note=Pfam match to entry PF00549 ligase-CoA%2C CoA-ligases%2C score 127.20%2C E-value 2.2e-34;gbkey=misc_feature;gene=sucC
NC_003888.3	RefSeq	sequence_feature	5235740	5235814	.	+	.	ID=id6106;Dbxref=GeneID:1100249;Note=PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3;gbkey=misc_feature;gene=sucC
NC_003888.3	RefSeq	gene	5236206	5237090	.	+	.	ID=gene4861;Dbxref=GeneID:1100250;Name=SCD63A.20;gbkey=Gene;gene=SCD63A.20;gene_biotype=protein_coding;gene_synonym=SCD63A.20,sucD;locus_tag=SCO4809
NC_003888.3	RefSeq	CDS	5236206	5237090	.	+	0	ID=cds4761;Parent=gene4861;Dbxref=Genbank:NP_628966.1,GeneID:1100250;Name=NP_628966.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;gene=SCD63A.20;product=succinyl-CoA synthetase subunit alpha;protein_id=NP_628966.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5236620	5237057	.	+	.	ID=id6107;Dbxref=GeneID:1100250;Note=Pfam match to entry PF00549 ligase-CoA%2C CoA-ligases%2C score 126.60%2C E-value 3.2e-34;gbkey=misc_feature;gene=SCD63A.20
NC_003888.3	RefSeq	sequence_feature	5236677	5236760	.	+	.	ID=id6108;Dbxref=GeneID:1100250;Note=PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1;gbkey=misc_feature;gene=SCD63A.20
NC_003888.3	RefSeq	sequence_feature	5236923	5236964	.	+	.	ID=id6109;Dbxref=GeneID:1100250;Note=PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site;gbkey=misc_feature;gene=SCD63A.20
NC_003888.3	RefSeq	sequence_feature	5237022	5237045	.	+	.	ID=id6110;Dbxref=GeneID:1100250;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCD63A.20
NC_003888.3	RefSeq	gene	5237203	5238231	.	-	.	ID=gene4862;Dbxref=GeneID:1100251;Name=SCD63A.21c;gbkey=Gene;gene=SCD63A.21c;gene_biotype=protein_coding;gene_synonym=SCD63A.21c;locus_tag=SCO4810
NC_003888.3	RefSeq	CDS	5237203	5238231	.	-	0	ID=cds4762;Parent=gene4862;Dbxref=Genbank:NP_628967.1,GeneID:1100251;Name=NP_628967.1;Note=SCD63A.21c%2C hypothetical protein%2C len: 342 aa%3B similar to TR:Q9Z9I2 (EMBL:AB024056) Streptomyces fradiae unknown protein%2C 306 aa%3B fasta scores: opt: 645 z-score: 632.8 E(): 8.7e-28%3B 44.5%25 identity in 281 aa overlap;gbkey=CDS;gene=SCD63A.21c;product=hypothetical protein;protein_id=NP_628967.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5238419	5238422	.	+	.	ID=id6111;gbkey=RBS
NC_003888.3	RefSeq	gene	5238424	5240100	.	+	.	ID=gene4863;Dbxref=GeneID:1100252;Name=SCD63A.22;gbkey=Gene;gene=SCD63A.22;gene_biotype=protein_coding;gene_synonym=SCD63A.22;locus_tag=SCO4811
NC_003888.3	RefSeq	CDS	5238424	5240100	.	+	0	ID=cds4763;Parent=gene4863;Dbxref=Genbank:NP_628968.1,GeneID:1100252;Name=NP_628968.1;Note=SCD63A.22%2C possible integral membrane protein%2C len: 558 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD63A.22;product=hypothetical protein;protein_id=NP_628968.1;transl_table=11
NC_003888.3	RefSeq	gene	5240239	5241036	.	-	.	ID=gene4864;Dbxref=GeneID:1100253;Name=SCD63A.23c;gbkey=Gene;gene=SCD63A.23c;gene_biotype=protein_coding;gene_synonym=SCD63A.23c;locus_tag=SCO4812
NC_003888.3	RefSeq	CDS	5240239	5241036	.	-	0	ID=cds4764;Parent=gene4864;Dbxref=Genbank:NP_628969.1,GeneID:1100253;Name=NP_628969.1;Note=SCD63A.23c%2C possible integral membrane protein%2C len: 265 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCD63A.23c;product=hypothetical protein;protein_id=NP_628969.1;transl_table=11
NC_003888.3	RefSeq	gene	5241331	5241978	.	+	.	ID=gene4865;Dbxref=GeneID:1100254;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;gene_synonym=SCD63A.24;locus_tag=SCO4813
NC_003888.3	RefSeq	CDS	5241331	5241978	.	+	0	ID=cds4765;Parent=gene4865;Dbxref=Genbank:NP_628970.1,GeneID:1100254;Name=NP_628970.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=NP_628970.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5241361	5241921	.	+	.	ID=id6112;Dbxref=GeneID:1100254;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 207.70%2C E-value 1e-58;gbkey=misc_feature;gene=purN
NC_003888.3	RefSeq	sequence_feature	5241766	5241837	.	+	.	ID=id6113;Dbxref=GeneID:1100254;Note=PS00373 Phosphoribosylglycinamide formyltransferase active site;gbkey=misc_feature;gene=purN
NC_003888.3	RefSeq	gene	5241975	5243546	.	+	.	ID=gene4866;Dbxref=GeneID:1100255;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;gene_synonym=SCD63A.25;locus_tag=SCO4814
NC_003888.3	RefSeq	CDS	5241975	5243546	.	+	0	ID=cds4766;Parent=gene4866;Dbxref=Genbank:NP_628971.1,GeneID:1100255;Name=NP_628971.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=NP_628971.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5242401	5243345	.	+	.	ID=id6114;Dbxref=GeneID:1100255;Note=Pfam match to entry PF01808 AICARFT_IMPCHas%2C AICARFT/IMPCHase bienzyme%2C score 508.80%2C E-value 4.2e-149;gbkey=misc_feature;gene=purH
NC_003888.3	RefSeq	gene	5243963	5244607	.	-	.	ID=gene4867;Dbxref=GeneID:1100256;Name=SCD63A.26c;gbkey=Gene;gene=SCD63A.26c;gene_biotype=protein_coding;gene_synonym=SCD63A.26c;locus_tag=SCO4815
NC_003888.3	RefSeq	CDS	5243963	5244607	.	-	0	ID=cds4767;Parent=gene4867;Dbxref=Genbank:NP_628972.1,GeneID:1100256;Name=NP_628972.1;Note=SCD63A.26c%2C possible hypothetical protein%2C len: 214 aa. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCD63A.26c;product=hypothetical protein;protein_id=NP_628972.1;transl_table=11
NC_003888.3	RefSeq	gene	5244609	5247029	.	-	.	ID=gene4868;Dbxref=GeneID:1100257;Name=SC2A6.01c;gbkey=Gene;gene=SC2A6.01c;gene_biotype=protein_coding;gene_synonym=SC2A6.01c,SCD63A.27c;locus_tag=SCO4816
NC_003888.3	RefSeq	CDS	5244609	5247029	.	-	0	ID=cds4768;Parent=gene4868;Dbxref=Genbank:NP_733648.1,GeneID:1100257;Name=NP_733648.1;Note=SC2A6.01c%2C hypothetical protein (fragment)%2C len: >232 aa%3B similar to TR:O34320 (EMBL:AJ222587) Bacillus subtilis YkuG protein%2C 760 aa%3B fasta scores: opt: 439 z-score: 541.2 E(): 1.2e-22%3B 37.1%25 identity in 229 aa overlap~SCD63A.27c%2C hypothetical protein (fragment)%2C len: >605 aa%3B similar to TR:O34320 (EMBL:AJ222587) Bacillus subtilis YkuG protein%2C 760 aa%3B fasta scores: opt: 961 z-score: 1162.8 E(): 0%3B 34.4%25 identity in 596 aa overlap;gbkey=CDS;gene=SC2A6.01c;product=hypothetical protein;protein_id=NP_733648.1;transl_table=11
NC_003888.3	RefSeq	gene	5247215	5248573	.	-	.	ID=gene4869;Dbxref=GeneID:1100258;Name=SC2A6.02c;gbkey=Gene;gene=SC2A6.02c;gene_biotype=protein_coding;gene_synonym=SC2A6.02c;locus_tag=SCO4817
NC_003888.3	RefSeq	CDS	5247215	5248573	.	-	0	ID=cds4769;Parent=gene4869;Dbxref=Genbank:NP_628973.1,GeneID:1100258;Name=NP_628973.1;Note=SC2A6.02c%2C possible Ser/Thr protein kinase%2C len: 452 aa%3B similar to TR:CAB82017 (EMBL:AL161755) Streptomyces coelicolor Ser/Thr protein kinase SCD63.10%2C 380 aa%3B fasta scores: opt: 297 z-score: 312.5 E(): 6.3e-10%3B 28.8%25 identity in 379 aa overlap and to Streptomyces coelicolor SC2A6.05c%2C 712 aa%3B fasta scores: opt: 1410 z-score: 1253.9 E(): 0%3B 68.7%25 identity in 339 aa overlap. Contains Pfam matches to entries PF00069 pkinase%2C Eukaryotic protein kinase domain and PF01471 PG_binding_1%2C  peptidoglycan binding domain. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC2A6.02c;product=Ser/Thr protein kinase;protein_id=NP_628973.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5247224	5247412	.	-	.	ID=id6115;Dbxref=GeneID:1100258;Note=Pfam match to entry PF01471 PG_binding_1%2C  peptidoglycan binding domain%2C score 80.00%2C E-value 4.8e-20;gbkey=misc_feature;gene=SC2A6.02c
NC_003888.3	RefSeq	sequence_feature	5247701	5248519	.	-	.	ID=id6116;Dbxref=GeneID:1100258;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 131.30%2C E-value 1.8e-35;gbkey=misc_feature;gene=SC2A6.02c
NC_003888.3	RefSeq	gene	5248570	5249310	.	-	.	ID=gene4870;Dbxref=GeneID:1100259;Name=SC2A6.03c;gbkey=Gene;gene=SC2A6.03c;gene_biotype=protein_coding;gene_synonym=SC2A6.03c;locus_tag=SCO4818
NC_003888.3	RefSeq	CDS	5248570	5249310	.	-	0	ID=cds4770;Parent=gene4870;Dbxref=Genbank:NP_628974.1,GeneID:1100259;Name=NP_628974.1;Note=SC2A6.03c%2C unknown%2C len: 246 aa%3B similar to Streptomyces coelicolor SC2A6.06c%2C 243 aa%3B fasta scores: opt: 1097 z-score: 1146.8 E(): 0%3B 67.6%25 identity in 244 aa overlap;gbkey=CDS;gene=SC2A6.03c;product=hypothetical protein;protein_id=NP_628974.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5248576	5248579	.	-	.	ID=id6117;Dbxref=GeneID:1100259;gbkey=RBS;gene=SC2A6.03c
NC_003888.3	RefSeq	gene	5249522	5249992	.	-	.	ID=gene4871;Dbxref=GeneID:1100260;Name=SC2A6.04c;gbkey=Gene;gene=SC2A6.04c;gene_biotype=protein_coding;gene_synonym=SC2A6.04c;locus_tag=SCO4819
NC_003888.3	RefSeq	CDS	5249522	5249992	.	-	0	ID=cds4771;Parent=gene4871;Dbxref=Genbank:NP_628975.1,GeneID:1100260;Name=NP_628975.1;Note=SC2A6.04c%2C possible hypothetical protein%2C len: 156 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC2A6.04c;product=hypothetical protein;protein_id=NP_628975.1;transl_table=11
NC_003888.3	RefSeq	gene	5250091	5252229	.	-	.	ID=gene4872;Dbxref=GeneID:1100261;Name=SC2A6.05c;gbkey=Gene;gene=SC2A6.05c;gene_biotype=protein_coding;gene_synonym=SC2A6.05c;locus_tag=SCO4820
NC_003888.3	RefSeq	CDS	5250091	5252229	.	-	0	ID=cds4772;Parent=gene4872;Dbxref=Genbank:NP_628976.1,GeneID:1100261;Name=NP_628976.1;Note=SC2A6.05c%2C possible Ser/Thr protein kinase%2C len: 712 aa%3B C-terminal region similar to TR:O53510 (EMBL:AL021957) Mycobacterium tuberculosis Ser/Thr protein kinase MTV021.09%2C 399 aa%3B fasta scores: opt: 289 z-score: 239.4 E(): 7.5e-06%3B 30.6%25 identity in 340 aa overlap and to Streptomyces coelicolor SC2A6.02c%2C 452 aa%3B fasta scores: opt: 1410 z-score: 964.7 E(): 0%3B 68.7%25 identity in 339 aa overlap. Contains 2 Pfam matches to entry PF00069 pkinase%2C Eukaryotic protein kinase domain. Contains also possible hydrophobic membrane spanning regions%2C 3x degenerate repeat: (T/H)GTGTGT(8)AHPA(K/E)GDTD(N/D)PG(16) and 2x degenerate repeat: PSRA(Q/H)TDTAHPAEGDTD(D/N)PGHTSGNGTTGTDGT(R/G)S(7);gbkey=CDS;gene=SC2A6.05c;product=Ser/Thr protein kinase;protein_id=NP_628976.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5250787	5251515	.	-	.	ID=id6118;Dbxref=GeneID:1100261;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 93.70%2C E-value 6.6e-25;gbkey=misc_feature;gene=SC2A6.05c
NC_003888.3	RefSeq	repeat_region	5251609	5251959	.	-	.	ID=id6119;Dbxref=GeneID:1100261;Note=3x degenerate repeat translated in SC2A6.05c;gbkey=repeat_region;gene=SC2A6.05c
NC_003888.3	RefSeq	repeat_region	5251702	5251938	.	-	.	ID=id6120;Dbxref=GeneID:1100261;Note=2x degenerate repeat translated in SC2A6.05c;gbkey=repeat_region;gene=SC2A6.05c
NC_003888.3	RefSeq	sequence_feature	5252119	5252178	.	-	.	ID=id6121;Dbxref=GeneID:1100261;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 6.00%2C E-value 1.4;gbkey=misc_feature;gene=SC2A6.05c
NC_003888.3	RefSeq	gene	5252226	5252957	.	-	.	ID=gene4873;Dbxref=GeneID:1100262;Name=SC2A6.06c;gbkey=Gene;gene=SC2A6.06c;gene_biotype=protein_coding;gene_synonym=SC2A6.06c;locus_tag=SCO4821
NC_003888.3	RefSeq	CDS	5252226	5252957	.	-	0	ID=cds4773;Parent=gene4873;Dbxref=Genbank:NP_628977.1,GeneID:1100262;Name=NP_628977.1;Note=SC2A6.06c%2C unknown%2C len: 243 aa%3B similar to Streptomyces coelicolor SC2A6.03c%2C 246 aa%3B fasta scores: opt: 1097 z-score: 1069.3 E(): 0%3B 67.6%25 identity in 244 aa overlap;gbkey=CDS;gene=SC2A6.06c;product=hypothetical protein;protein_id=NP_628977.1;transl_table=11
NC_003888.3	RefSeq	gene	5253098	5253685	.	-	.	ID=gene4874;Dbxref=GeneID:1100263;Name=SC2A6.07c;gbkey=Gene;gene=SC2A6.07c;gene_biotype=protein_coding;gene_synonym=SC2A6.07c;locus_tag=SCO4822
NC_003888.3	RefSeq	CDS	5253098	5253685	.	-	0	ID=cds4774;Parent=gene4874;Dbxref=Genbank:NP_628978.1,GeneID:1100263;Name=NP_628978.1;Note=SC2A6.07c%2C possible integral membrane protein%2C len: 195 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC2A6.07c;product=hypothetical protein;protein_id=NP_628978.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5253696	5253700	.	-	.	ID=id6122;gbkey=RBS
NC_003888.3	RefSeq	gene	5253808	5253984	.	+	.	ID=gene4875;Dbxref=GeneID:1100264;Name=SC2A6.08;gbkey=Gene;gene=SC2A6.08;gene_biotype=protein_coding;gene_synonym=SC2A6.08;locus_tag=SCO4823
NC_003888.3	RefSeq	CDS	5253808	5253984	.	+	0	ID=cds4775;Parent=gene4875;Dbxref=Genbank:NP_628979.1,GeneID:1100264;Name=NP_628979.1;Note=SC2A6.08%2C unknown%2C len: 58 aa. Contains a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC2A6.08;product=hypothetical protein;protein_id=NP_628979.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5253820	5253822	.	+	.	ID=id6123;Dbxref=GeneID:1100264;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SC2A6.08
NC_003888.3	RefSeq	ribosome_entry_site	5253969	5253972	.	+	.	ID=id6124;Dbxref=GeneID:1100264;gbkey=RBS;gene=SC2A6.08
NC_003888.3	RefSeq	gene	5253981	5254835	.	+	.	ID=gene4876;Dbxref=GeneID:1100265;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;gene_synonym=folD,SC2A6.09;locus_tag=SCO4824
NC_003888.3	RefSeq	CDS	5253981	5254835	.	+	0	ID=cds4776;Parent=gene4876;Dbxref=Genbank:NP_628980.1,GeneID:1100265;Name=NP_628980.1;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;gbkey=CDS;gene=folD;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=NP_628980.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5254023	5254817	.	+	.	ID=id6125;Dbxref=GeneID:1100265;Note=Pfam match to entry PF00763 THF_DHG_CYH%2C Tetrahydrofolate dehydrogenase/cyclohydrolase%2C score 472.40%2C E-value 3.6e-138;gbkey=misc_feature;gene=folD
NC_003888.3	RefSeq	ribosome_entry_site	5254817	5254820	.	+	.	ID=id6126;Dbxref=GeneID:1100265;gbkey=RBS;gene=folD
NC_003888.3	RefSeq	gene	5254825	5255361	.	+	.	ID=gene4877;Dbxref=GeneID:1100266;Name=SC2A6.10;gbkey=Gene;gene=SC2A6.10;gene_biotype=protein_coding;gene_synonym=SC2A6.10;locus_tag=SCO4825
NC_003888.3	RefSeq	CDS	5254825	5255361	.	+	0	ID=cds4777;Parent=gene4877;Dbxref=Genbank:NP_628981.1,GeneID:1100266;Name=NP_628981.1;Note=SC2A6.10%2C possible integral membrane protein%2C len: 178 aa%3B similar to TR:O32878 (EMBL:Z98271) Mycobacterium leprae hypothetical 9.6 kD protein MLCB1779.16c%2C 91 aa%3B fasta scores: opt: 148 z-score: 174.2 E(): 0.032%3B 27.5%25 identity in 80 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC2A6.10;product=hypothetical protein;protein_id=NP_628981.1;transl_table=11
NC_003888.3	RefSeq	gene	5255658	5257154	.	+	.	ID=gene4878;Dbxref=GeneID:1100267;Name=SC2A6.11;gbkey=Gene;gene=SC2A6.11;gene_biotype=protein_coding;gene_synonym=SC2A6.11;locus_tag=SCO4826
NC_003888.3	RefSeq	CDS	5255658	5257154	.	+	0	ID=cds4778;Parent=gene4878;Dbxref=Genbank:NP_628982.1,GeneID:1100267;Name=NP_628982.1;Note=SC2A6.11%2C possible membrane protein%2C len: 498 aa. Contains 5x degenerate repeat: (G/D)AY(G/D)(E/G)-(3) and possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC2A6.11;product=hypothetical protein;protein_id=NP_628982.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5256498	5256617	.	+	.	ID=id6127;Dbxref=GeneID:1100267;Note=5x degenerate repeat translated in SC2A6.11;gbkey=repeat_region;gene=SC2A6.11
NC_003888.3	RefSeq	ribosome_entry_site	5257507	5257511	.	+	.	ID=id6128;gbkey=RBS
NC_003888.3	RefSeq	gene	5257517	5258506	.	+	.	ID=gene4879;Dbxref=GeneID:1100268;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;gene_synonym=mdh,SC2A6.12;locus_tag=SCO4827
NC_003888.3	RefSeq	CDS	5257517	5258506	.	+	0	ID=cds4779;Parent=gene4879;Dbxref=Genbank:NP_628983.1,GeneID:1100268;Name=NP_628983.1;Note=catalyzes the oxidation of malate to oxaloacetate;gbkey=CDS;gene=mdh;product=malate dehydrogenase;protein_id=NP_628983.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5257535	5258488	.	+	.	ID=id6129;Dbxref=GeneID:1100268;Note=Pfam match to entry PF00056 ldh%2C lactate/malate dehydrogenase%2C score 322.00%2C E-value 6.8e-93;gbkey=misc_feature;gene=mdh
NC_003888.3	RefSeq	sequence_feature	5257982	5258020	.	+	.	ID=id6130;Dbxref=GeneID:1100268;Note=PS00068 Malate dehydrogenase active site signature;gbkey=misc_feature;gene=mdh
NC_003888.3	RefSeq	gene	5258735	5260264	.	+	.	ID=gene4880;Dbxref=GeneID:1100269;Name=gbsA;gbkey=Gene;gene=gbsA;gene_biotype=protein_coding;gene_synonym=gbsA,SC2A6.13;locus_tag=SCO4828
NC_003888.3	RefSeq	CDS	5258735	5260264	.	+	0	ID=cds4780;Parent=gene4880;Dbxref=Genbank:NP_628984.1,GeneID:1100269;Name=NP_628984.1;Note=SC2A6.13%2C gbsA%2C betaine aldehyde dehydrogenase%2C len: 509 aa%3B highly similar to SW:DHAB_BACSU (EMBL:U47861) Bacillus subtilis betaine aldehyde dehydrogenase (EC 1.2.1.8) GsbA%2C 490 aa%3B fasta scores: opt: 1874 z-score: 2114.6 E(): 0%3B 56.0%25 identity in 495 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family and matches to Prosite entries PS00687 Aldehyde dehydrogenases glutamic acid active site and PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=CDS;gene=gbsA;product=betaine aldehyde dehydrogenase;protein_id=NP_628984.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5258795	5260231	.	+	.	ID=id6131;Dbxref=GeneID:1100269;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 612.90%2C E-value 1.8e-180;gbkey=misc_feature;gene=gbsA
NC_003888.3	RefSeq	sequence_feature	5259512	5259535	.	+	.	ID=id6132;Dbxref=GeneID:1100269;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=gbsA
NC_003888.3	RefSeq	sequence_feature	5259611	5259646	.	+	.	ID=id6133;Dbxref=GeneID:1100269;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=gbsA
NC_003888.3	RefSeq	ribosome_entry_site	5260310	5260314	.	+	.	ID=id6134;gbkey=RBS
NC_003888.3	RefSeq	gene	5260321	5261853	.	+	.	ID=gene4881;Dbxref=GeneID:1100270;Name=SC2A6.14;gbkey=Gene;gene=SC2A6.14;gene_biotype=protein_coding;gene_synonym=SC2A6.14;locus_tag=SCO4829
NC_003888.3	RefSeq	CDS	5260321	5261853	.	+	0	ID=cds4781;Parent=gene4881;Dbxref=Genbank:NP_628985.1,GeneID:1100270;Name=NP_628985.1;Note=SC2A6.14%2C probable oxidoreductase%2C len: 510 aa%3B similar to SW:ALKJ_PSEOL (EMBL:X65936) Pseudomonas oleovorans alcohol dehydrogenase [acceptor] (EC 1.1.99.-) AlkJ%2C 558 aa%3B fasta scores: opt: 474 z-score: 541.0 E(): 1.2e-22%3B 31.1%25 identity in 541 aa overlap. Contains Pfam match to entry PF00732 GMC_oxred%2C GMC oxidoreductases and match to Prosite entry PS00624 GMC oxidoreductases signature 2;gbkey=CDS;gene=SC2A6.14;product=oxidoreductase;protein_id=NP_628985.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5260342	5261823	.	+	.	ID=id6135;Dbxref=GeneID:1100270;Note=Pfam match to entry PF00732 GMC_oxred%2C GMC oxidoreductases%2C score 386.80%2C E-value 2.2e-112;gbkey=misc_feature;gene=SC2A6.14
NC_003888.3	RefSeq	sequence_feature	5261065	5261109	.	+	.	ID=id6136;Dbxref=GeneID:1100270;Note=PS00624 GMC oxidoreductases signature 2;gbkey=misc_feature;gene=SC2A6.14
NC_003888.3	RefSeq	gene	5261850	5263034	.	+	.	ID=gene4882;Dbxref=GeneID:1100271;Name=SC2A6.15;gbkey=Gene;gene=SC2A6.15;gene_biotype=protein_coding;gene_synonym=SC2A6.15;locus_tag=SCO4830
NC_003888.3	RefSeq	CDS	5261850	5263034	.	+	0	ID=cds4782;Parent=gene4882;Dbxref=Genbank:NP_628986.1,GeneID:1100271;Name=NP_628986.1;Note=SC2A6.15%2C probable glycine/betaine ABC transport system ATP-binding protein%2C len: 394 aa%3B similar to SW:OPAA_BACSU (EMBL:U17292) Bacillus subtilis glycine/betaine transport ATP-binding protein OpuAa%2C 418 aa%3B fasta scores: opt: 1015 z-score: 1043.6 E(): 0%3B 48.5%25 identity in 338 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC2A6.15;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=NP_628986.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5262066	5262629	.	+	.	ID=id6137;Dbxref=GeneID:1100271;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 247.80%2C E-value 1.5e-70;gbkey=misc_feature;gene=SC2A6.15
NC_003888.3	RefSeq	sequence_feature	5262087	5262110	.	+	.	ID=id6138;Dbxref=GeneID:1100271;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2A6.15
NC_003888.3	RefSeq	sequence_feature	5262399	5262443	.	+	.	ID=id6139;Dbxref=GeneID:1100271;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC2A6.15
NC_003888.3	RefSeq	ribosome_entry_site	5263022	5263025	.	+	.	ID=id6140;Dbxref=GeneID:1100271;gbkey=RBS;gene=SC2A6.15
NC_003888.3	RefSeq	gene	5263034	5264980	.	+	.	ID=gene4883;Dbxref=GeneID:1100272;Name=SC2A6.16;gbkey=Gene;gene=SC2A6.16;gene_biotype=protein_coding;gene_synonym=SC2A6.16;locus_tag=SCO4831
NC_003888.3	RefSeq	CDS	5263034	5264980	.	+	0	ID=cds4783;Parent=gene4883;Dbxref=Genbank:NP_628987.1,GeneID:1100272;Name=NP_628987.1;Note=SC2A6.16%2C probable glycine/betaine ABC transport system integral membrane protein%2C len: 648 aa%3B N-terminal domain similar to SW:OPAB_BACSU (EMBL:U17292) Bacillus subtilis glycine/betaine transport system permease OpuAb aa%3B fasta scores: opt: 662 z-score: 724.1 E(): 7.5e-33%3B 38.7%25 identity in 269 aa overlap and C-terminal domain similar to TR:Q9RR45 (EMBL:AF039835) Listeria monocytogenes glycine/betaine membrane transport protein GbuB%2C 282 aa%3B fasta scores: opt: 594 z-score: 650.5 E(): 9.5e-29%3B 36.5%25 identity in 263 aa overlap. Contains 2x Pfam matches to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC2A6.16;product=glycine/betaine ABC transporter integral membrane protein;protein_id=NP_628987.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5263712	5263924	.	+	.	ID=id6141;Dbxref=GeneID:1100272;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 27.80%2C E-value 0.00026;gbkey=misc_feature;gene=SC2A6.16
NC_003888.3	RefSeq	sequence_feature	5264654	5264911	.	+	.	ID=id6142;Dbxref=GeneID:1100272;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 21.10%2C E-value 0.027;gbkey=misc_feature;gene=SC2A6.16
NC_003888.3	RefSeq	sequence_feature	5264657	5264743	.	+	.	ID=id6143;Dbxref=GeneID:1100272;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC2A6.16
NC_003888.3	RefSeq	ribosome_entry_site	5264972	5264975	.	+	.	ID=id6144;Dbxref=GeneID:1100272;gbkey=RBS;gene=SC2A6.16
NC_003888.3	RefSeq	gene	5264982	5265950	.	+	.	ID=gene4884;Dbxref=GeneID:1100273;Name=SC2A6.17;gbkey=Gene;gene=SC2A6.17;gene_biotype=protein_coding;gene_synonym=SC2A6.17;locus_tag=SCO4832
NC_003888.3	RefSeq	CDS	5264982	5265950	.	+	0	ID=cds4784;Parent=gene4884;Dbxref=Genbank:NP_628988.1,GeneID:1100273;Name=NP_628988.1;Note=SC2A6.17%2C possible glycine/betaine-binding lipoprotein%2C len: 322 aa%3B similar to SW:PROX_ECOLI (EMBL:M24856) Escherichia coli glycine/betaine-binding periplasmic protein precursor ProX or ProU%2C 330 aa%3B fasta scores: opt: 112 z-score: 137.8 E(): 3.4%3B 21.8%25 identity in 325 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC2A6.17;product=glycine/betaine-binding lipoprotein;protein_id=NP_628988.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5265024	5265056	.	+	.	ID=id6145;Dbxref=GeneID:1100273;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC2A6.17
NC_003888.3	RefSeq	gene	5265954	5266685	.	-	.	ID=gene4885;Dbxref=GeneID:1100274;Name=SC2A6.18c;gbkey=Gene;gene=SC2A6.18c;gene_biotype=protein_coding;gene_synonym=SC2A6.18c,SC5G8.01c;locus_tag=SCO4833
NC_003888.3	RefSeq	CDS	5265954	5266685	.	-	0	ID=cds4785;Parent=gene4885;Dbxref=Genbank:NP_733649.1,GeneID:1100274;Name=NP_733649.1;Note=SC5G8.01c%2C partial CDS%2C possible phosphorylmutase%2C len: >101 aa%3B similar to many e.g. SW:P11435 (CPPM_STRHY) carboxyvinyl-carboxyphosphonate phosphorylmutase from Streptomyces hygroscopicus (294 aa) fasta scores%3B opt: 185%2C z-score: 234.7%2C E(): 1.3e-05%2C 43.0%25 identity in 93 aa overlap.~SC2A6.18c%2C possible transferase (fragment)%2C len: >172 aa%3B similar to C-terminal part of SW:CPPM_BACSU (EMBL:D84432) Bacillus subtilis carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) YqiQ%2C 301 aa%3B fasta scores: opt: 158 z-score: 187.0 E(): 0.0062%3B 31.0%25 identity in 116 aa overlap;gbkey=CDS;gene=SC2A6.18c;product=phosphorylmutase;protein_id=NP_733649.1;transl_table=11
NC_003888.3	RefSeq	gene	5266682	5267128	.	-	.	ID=gene4886;Dbxref=GeneID:1100275;Name=SC5G8.02c;gbkey=Gene;gene=SC5G8.02c;gene_biotype=protein_coding;gene_synonym=SC5G8.02c;locus_tag=SCO4834
NC_003888.3	RefSeq	CDS	5266682	5267128	.	-	0	ID=cds4786;Parent=gene4886;Dbxref=Genbank:NP_628989.1,GeneID:1100275;Name=NP_628989.1;Note=SC5G8.02c%2C conserved hypothetical protein%2C len: 148 aa%3B similar to many eg. TR:P96684 (EMBL:AB001488) hypothetical protein from Bacillus subtilis (147 aa) fasta scores%3B opt: 329%2C z-score: 442.4%2C E(): 3.5e-17%2C 46.7%25 identity in 105 aa overlap and TR:CAB56729 (EMBL:AL121600) hypothetical protein from Streptomyces coelicolor (173 aa) fasta scores%3B opt: 298%2C z-score: 400.8%2C E(): 7.2e-15%2C 38.9%25 identity in 149 aa overlap. Also similar to neighbouring CDS 03c fasta scores%3B opt: 530%2C z-score: 623.7%2C E(): 3.2e-29%2C 62.3%25 identity in 138 aa overlap;gbkey=CDS;gene=SC5G8.02c;product=hypothetical protein;protein_id=NP_628989.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5266695	5266699	.	-	.	ID=id6146;Dbxref=GeneID:1100275;gbkey=RBS;gene=SC5G8.02c
NC_003888.3	RefSeq	gene	5267125	5267634	.	-	.	ID=gene4887;Dbxref=GeneID:1100276;Name=SC5G8.03c;gbkey=Gene;gene=SC5G8.03c;gene_biotype=protein_coding;gene_synonym=SC5G8.03c;locus_tag=SCO4835
NC_003888.3	RefSeq	CDS	5267125	5267634	.	-	0	ID=cds4787;Parent=gene4887;Dbxref=Genbank:NP_628990.1,GeneID:1100276;Name=NP_628990.1;Note=SC5G8.03c%2C conserved hypothetical protein%2C len: 169aa%3B similar to many eg. TR:P96684 (EMBL:AB001488) hypothetical protein from Bacillus subtilis (147 aa) fasta scores%3B opt: 386%2C z-score: 504.8%2C E(): 1.2e-20%2C 42.6%25 identity in 136 aa overlap and TR:CAB66282 (EMBL:AL136519) hypothetical protein from Streptomyces coelicolor (161 aa) fasta scores%3B opt: 324%2C z-score: 425.2%2C E(): 3.2e-16%2C 45.0%25 identity in 129 aa overlap. Also similar to neighbouring CDS SC5G8.02c fasta scores%3B opt: 530%2C z-score: 667.2%2C E(): 1.2e-31%2C 62.3%25 identity in 138 aa overlap;gbkey=CDS;gene=SC5G8.03c;product=hypothetical protein;protein_id=NP_628990.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5267135	5267139	.	-	.	ID=id6147;Dbxref=GeneID:1100276;gbkey=RBS;gene=SC5G8.03c
NC_003888.3	RefSeq	gene	5267682	5269070	.	+	.	ID=gene4888;Dbxref=GeneID:1100277;Name=SC5G8.04;gbkey=Gene;gene=SC5G8.04;gene_biotype=protein_coding;gene_synonym=SC5G8.04;locus_tag=SCO4836
NC_003888.3	RefSeq	CDS	5267682	5269070	.	+	0	ID=cds4788;Parent=gene4888;Dbxref=Genbank:NP_628991.1,GeneID:1100277;Name=NP_628991.1;Note=SC5G8.04%2C possible gntR-family regulator%2C len: 462 aa%3B similar to many proposed regulators eg. TR:AAF01064 (EMBL:AF189258) transcriptional regulator (fragment) from Streptomyces venezuelae (507 aa) fasta scores%3B opt: 1010%2C z-score: 1115.6%2C E(): 0%2C 45.2%25 identity in 389 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family.;gbkey=CDS;gene=SC5G8.04;product=GntR family transcriptional regulator;protein_id=NP_628991.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5267754	5267933	.	+	.	ID=id6148;Dbxref=GeneID:1100277;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 71.70%2C E-value 1.3e-20;gbkey=misc_feature;gene=SC5G8.04
NC_003888.3	RefSeq	ribosome_entry_site	5269276	5269280	.	+	.	ID=id6149;gbkey=RBS
NC_003888.3	RefSeq	gene	5269286	5270731	.	+	.	ID=gene4889;Dbxref=GeneID:1100278;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;gene_synonym=glyA1,SC5G8.05;locus_tag=SCO4837
NC_003888.3	RefSeq	CDS	5269286	5270731	.	+	0	ID=cds4789;Parent=gene4889;Dbxref=Genbank:NP_628992.1,GeneID:1100278;Name=NP_628992.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=NP_628992.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5269340	5269648	.	+	.	ID=id6150;Dbxref=GeneID:1100278;Note=Pfam match to entry PF00464 SHMT%2C Serine hydroxymethyltransferase%2C score 107.80%2C E-value 1.1e-31;gbkey=misc_feature;gene=glyA
NC_003888.3	RefSeq	sequence_feature	5269754	5270572	.	+	.	ID=id6151;Dbxref=GeneID:1100278;Note=Pfam match to entry PF00464 SHMT%2C Serine hydroxymethyltransferase%2C score 423.00%2C E-value 1.7e-126;gbkey=misc_feature;gene=glyA
NC_003888.3	RefSeq	gene	5270746	5271402	.	-	.	ID=gene4890;Dbxref=GeneID:1100279;Name=SC5G8.06c;gbkey=Gene;gene=SC5G8.06c;gene_biotype=protein_coding;gene_synonym=SC5G8.06c;locus_tag=SCO4838
NC_003888.3	RefSeq	CDS	5270746	5271402	.	-	0	ID=cds4790;Parent=gene4890;Dbxref=Genbank:NP_628993.1,GeneID:1100279;Name=NP_628993.1;Note=SC5G8.06c%2C unknown%2C len: 218aa;gbkey=CDS;gene=SC5G8.06c;product=hypothetical protein;protein_id=NP_628993.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5271408	5271414	.	-	.	ID=id6152;gbkey=RBS
NC_003888.3	RefSeq	gene	5271519	5272538	.	+	.	ID=gene4891;Dbxref=GeneID:1100280;Name=SC5G8.07;gbkey=Gene;gene=SC5G8.07;gene_biotype=protein_coding;gene_synonym=SC5G8.07,trpS2;locus_tag=SCO4839
NC_003888.3	RefSeq	CDS	5271519	5272538	.	+	0	ID=cds4791;Parent=gene4891;Dbxref=Genbank:NP_628994.1,GeneID:1100280;Name=NP_628994.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=SC5G8.07;product=tryptophanyl-tRNA synthetase;protein_id=NP_628994.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5271546	5272220	.	+	.	ID=id6153;Dbxref=GeneID:1100280;Note=Pfam match to entry PF00579 tRNA-synt_1b%2C tRNA synthetases class I (W and Y)%2C score 298.30%2C E-value 9.4e-86;gbkey=misc_feature;gene=SC5G8.07
NC_003888.3	RefSeq	sequence_feature	5271564	5271596	.	+	.	ID=id6154;Dbxref=GeneID:1100280;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=SC5G8.07
NC_003888.3	RefSeq	ribosome_entry_site	5272705	5272709	.	+	.	ID=id6155;gbkey=RBS
NC_003888.3	RefSeq	gene	5272715	5273293	.	+	.	ID=gene4892;Dbxref=GeneID:1100281;Name=SC5G8.08;gbkey=Gene;gene=SC5G8.08;gene_biotype=protein_coding;gene_synonym=SC5G8.08;locus_tag=SCO4840
NC_003888.3	RefSeq	CDS	5272715	5273293	.	+	0	ID=cds4792;Parent=gene4892;Dbxref=Genbank:NP_628995.1,GeneID:1100281;Name=NP_628995.1;Note=SC5G8.08%2C possible hypothetical protein%2C len: 339aa%3B N-terminal similar to many eg. TR:Q45633 (EMBL:L13418) maltose permease from Bacillus stearothermophilus (314 aa) fasta scores%3B opt: 155%2C z-score: 191.9%2C E(): 0.0031%2C 31.5%25 identity in 127 aa overlap. Contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;gene=SC5G8.08;product=hypothetical protein;protein_id=NP_628995.1;transl_table=11
NC_003888.3	RefSeq	gene	5273376	5274146	.	-	.	ID=gene4893;Dbxref=GeneID:1100282;Name=SC5G8.09c;gbkey=Gene;gene=SC5G8.09c;gene_biotype=protein_coding;gene_synonym=SC5G8.09c;locus_tag=SCO4841
NC_003888.3	RefSeq	CDS	5273376	5274146	.	-	0	ID=cds4793;Parent=gene4893;Dbxref=Genbank:NP_628996.1,GeneID:1100282;Name=NP_628996.1;Note=SC5G8.09c%2C possible short-chain dehydrogenase%2C len: 256aa%3B similar to many proposed oxidoreductases eg. similar to many eg. SW:P43168 (YMP3_STRCO) hypothetical oxidoreductase from Streptomyces coelicolor (251 aa) fasta scores%3B opt: 1120%2C z-score: 1262.0%2C E(): 0%2C 73.6%25 identity in 250 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=CDS;gene=SC5G8.09c;product=short-chain dehydrogenase;protein_id=NP_628996.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5273553	5274107	.	-	.	ID=id6156;Dbxref=GeneID:1100282;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 113.20%2C E-value 5e-30;gbkey=misc_feature;gene=SC5G8.09c
NC_003888.3	RefSeq	sequence_feature	5273616	5273702	.	-	.	ID=id6157;Dbxref=GeneID:1100282;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC5G8.09c
NC_003888.3	RefSeq	gene	5274166	5275539	.	-	.	ID=gene4894;Dbxref=GeneID:1100283;Name=SC5G8.10c;gbkey=Gene;gene=SC5G8.10c;gene_biotype=protein_coding;gene_synonym=SC5G8.10c;locus_tag=SCO4842
NC_003888.3	RefSeq	CDS	5274166	5275539	.	-	0	ID=cds4794;Parent=gene4894;Dbxref=Genbank:NP_628997.1,GeneID:1100283;Name=NP_628997.1;Note=SC5G8.10c%2C possible oxidoreductase%2C len: 457aa%3B similar to many of undefined function eg. SW:P43167 (YMP4_STRCO) hypothetical protein from Streptomyces coelicolor (367 aa)fasta scores%3B opt: 1349%2C z-score: 1513.9%2C E(): 0%2C 58.1%25 identity in 375 aa overlap. Contains Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain.;gbkey=CDS;gene=SC5G8.10c;product=oxidoreductase;protein_id=NP_628997.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5275000	5275539	.	-	.	ID=id6158;Dbxref=GeneID:1100283;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 6.00%2C E-value 1.2e-06;gbkey=misc_feature;gene=SC5G8.10c
NC_003888.3	RefSeq	sequence_feature	5275618	5275623	.	+	.	ID=id6159;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5275618	5275623	.	-	.	ID=id6160;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5275682	5276191	.	+	.	ID=gene4895;Dbxref=GeneID:1100284;Name=SC5G8.11;gbkey=Gene;gene=SC5G8.11;gene_biotype=protein_coding;gene_synonym=SC5G8.11;locus_tag=SCO4843
NC_003888.3	RefSeq	CDS	5275682	5276191	.	+	0	ID=cds4795;Parent=gene4895;Dbxref=Genbank:NP_628998.1,GeneID:1100284;Name=NP_628998.1;Note=SC5G8.11%2C possible integral membrane protein%2C len: 169aa%3B similar to many of undefined function eg. TR:O53584 (EMBL:AL022076) hypothetical protein from Mycobacterium tuberculosis (165 aa) fasta scores%3B opt: 324%2C z-score: 386.8%2C E(): 4.3e-14%2C 41.5%25 identity in 159 aa overlap. Contains Pfam match to entry PF01569 PAP2%2C PAP2 superfamily and possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SC5G8.11;product=hypothetical protein;protein_id=NP_628998.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5275787	5276185	.	+	.	ID=id6161;Dbxref=GeneID:1100284;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score 41.10%2C E-value 2.5e-08;gbkey=misc_feature;gene=SC5G8.11
NC_003888.3	RefSeq	ribosome_entry_site	5276174	5276178	.	+	.	ID=id6162;Dbxref=GeneID:1100284;gbkey=RBS;gene=SC5G8.11
NC_003888.3	RefSeq	gene	5276184	5277152	.	+	.	ID=gene4896;Dbxref=GeneID:1100285;Name=SC5G8.12;gbkey=Gene;gene=SC5G8.12;gene_biotype=protein_coding;gene_synonym=SC5G8.12;locus_tag=SCO4844
NC_003888.3	RefSeq	CDS	5276184	5277152	.	+	0	ID=cds4796;Parent=gene4896;Dbxref=Genbank:NP_628999.1,GeneID:1100285;Name=NP_628999.1;Note=catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate;gbkey=CDS;gene=SC5G8.12;product=phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase;protein_id=NP_628999.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5277137	5277141	.	+	.	ID=id6163;Dbxref=GeneID:1100285;gbkey=RBS;gene=SC5G8.12
NC_003888.3	RefSeq	gene	5277146	5277619	.	+	.	ID=gene4897;Dbxref=GeneID:1100286;Name=SC5G8.13;gbkey=Gene;gene=SC5G8.13;gene_biotype=protein_coding;gene_synonym=SC5G8.13;locus_tag=SCO4845
NC_003888.3	RefSeq	CDS	5277146	5277619	.	+	0	ID=cds4797;Parent=gene4897;Dbxref=Genbank:NP_629000.1,GeneID:1100286;Name=NP_629000.1;Note=SC5G8.13%2C possible integral membrane protein%2C len: 157aa%3B similar to many eg. SW:P72055 (Y1I9_MYCTU) hypothetical protein from Mycobacterium tuberculosis (121 aa) fasta scores%3B opt: 139%2C z-score: 176.2%2C E(): 0.023%2C 31.7%25 identity in 126 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SC5G8.13;product=hypothetical protein;protein_id=NP_629000.1;transl_table=11
NC_003888.3	RefSeq	gene	5277574	5278539	.	+	.	ID=gene4898;Dbxref=GeneID:1100287;Name=SC5G8.14;gbkey=Gene;gene=SC5G8.14;gene_biotype=protein_coding;gene_synonym=SC5G8.14;locus_tag=SCO4846
NC_003888.3	RefSeq	CDS	5277574	5278539	.	+	0	ID=cds4798;Parent=gene4898;Dbxref=Genbank:NP_629001.1,GeneID:1100287;Name=NP_629001.1;Note=SC5G8.14%2C possible integral membrane protein%2C len: 321aa%3B weakly similar to many eg. SW:P45417 (YHJD_ERWCH) hypothetical protein from Erwinia chrysanthemi (328 aa) fasta scores%3B opt: 305%2C z-score: 344.6%2C E(): 9.7e-12%2C 29.7%25 identity in 283 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SC5G8.14;product=hypothetical protein;protein_id=NP_629001.1;transl_table=11
NC_003888.3	RefSeq	gene	5278487	5279761	.	-	.	ID=gene4899;Dbxref=GeneID:1100288;Name=SC5G8.15c;gbkey=Gene;gene=SC5G8.15c;gene_biotype=protein_coding;gene_synonym=SC5G8.15c;locus_tag=SCO4847
NC_003888.3	RefSeq	CDS	5278487	5279761	.	-	0	ID=cds4799;Parent=gene4899;Dbxref=Genbank:NP_629002.1,GeneID:1100288;Name=NP_629002.1;Note=SC5G8.15c%2C possible D-alanyl-D-alanine carboxypeptidase%2C len: 455 aa%3B similar to many e.g. TR:O53380 (EMBL:AL021841) proposed penicillin-binding protein from Mycobacterium tuberculosis (405 aa) fasta scores%3B opt: 392%2C z-score: 369.1%2C E(): 4.2e-13%2C 31.7%25 identity in 439 aa overlap. Contains Pfam match to entry PF00768 Peptidase_S11%2C D-alanyl-D-alanine carboxypeptidase. Position of translational start uncertain.;gbkey=CDS;gene=SC5G8.15c;product=D-alanyl-D-alanine carboxypeptidase;protein_id=NP_629002.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5278754	5279569	.	-	.	ID=id6164;Dbxref=GeneID:1100288;Note=Pfam match to entry PF00768 Peptidase_S11%2C D-alanyl-D-alanine carboxypeptidase%2C score 129.70%2C E-value 5.4e-35;gbkey=misc_feature;gene=SC5G8.15c
NC_003888.3	RefSeq	sequence_feature	5279795	5279974	.	-	.	ID=id6165;Note=attB%2C attachment site for bacteriophage phiBT1 (M. Smith%2C Uni. of Nottingham%2C Nottingham%2C UK).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5279853	5280092	.	+	.	ID=gene4900;Dbxref=GeneID:1100289;Name=SC5G8.16;gbkey=Gene;gene=SC5G8.16;gene_biotype=protein_coding;gene_synonym=SC5G8.16;locus_tag=SCO4848
NC_003888.3	RefSeq	CDS	5279853	5280092	.	+	0	ID=cds4800;Parent=gene4900;Dbxref=Genbank:NP_629003.1,GeneID:1100289;Name=NP_629003.1;Note=SC5G8.16%2C possible integral membrane protein%2C len: 79aa%3B contains possible membrane-spanning hydrophobic regions. Position of translational start uncertain%2C possible alternative start at 13619.;gbkey=CDS;gene=SC5G8.16;product=hypothetical protein;protein_id=NP_629003.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5280132	5280138	.	+	.	ID=id6166;gbkey=RBS
NC_003888.3	RefSeq	gene	5280147	5281457	.	+	.	ID=gene4901;Dbxref=GeneID:1100290;Name=SC5G8.17;gbkey=Gene;gene=SC5G8.17;gene_biotype=protein_coding;gene_synonym=SC5G8.17;locus_tag=SCO4849
NC_003888.3	RefSeq	CDS	5280147	5281457	.	+	0	ID=cds4801;Parent=gene4901;Dbxref=Genbank:NP_629004.1,GeneID:1100290;Name=NP_629004.1;Note=SC5G8.17%2C possible integral membrane protein%2C len: 436 aa%3B N-terminal region contains possible membrane-spanning hydrophobic regions while the remainder is similar to many hypothetical proteins e.g. TR:Q9ZM43 (EMBL:AE001473) from Helicobacter pylori J99 (370 aa) fasta scores%3B opt: 596%2C z-score: 590.7%2C E(): 1.9e-25%2C 37.4%25 identity in 273 aa overlap;gbkey=CDS;gene=SC5G8.17;product=hypothetical protein;protein_id=NP_629004.1;transl_table=11
NC_003888.3	RefSeq	gene	5281448	5282203	.	-	.	ID=gene4902;Dbxref=GeneID:1100291;Name=SC5G8.18c;gbkey=Gene;gene=SC5G8.18c;gene_biotype=protein_coding;gene_synonym=SC5G8.18c;locus_tag=SCO4850
NC_003888.3	RefSeq	CDS	5281448	5282203	.	-	0	ID=cds4802;Parent=gene4902;Dbxref=Genbank:NP_629005.1,GeneID:1100291;Name=NP_629005.1;Note=SC5G8.18c%2C possible tetR-family transcriptional regulator%2C len: 251 aa%3B N-terminal region similar to many e.g. TR:CAB53315 (EMBL:AL109974) tetR-family transcriptional regulator from Streptomyces coelicolor (203 aa) fasta scores%3B opt: 190%2C z-score: 242.1%2C E(): 5e-06%2C 35.0%25 identity in 103 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and helix-turn-helix motif 40..61 aa;gbkey=CDS;gene=SC5G8.18c;product=TetR family transcriptional regulator;protein_id=NP_629005.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5281994	5282134	.	-	.	ID=id6167;Dbxref=GeneID:1100291;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 52.90%2C E-value 6.1e-13;gbkey=misc_feature;gene=SC5G8.18c
NC_003888.3	RefSeq	gene	5282215	5282703	.	-	.	ID=gene4903;Dbxref=GeneID:1100292;Name=SC5G8.19c;gbkey=Gene;gene=SC5G8.19c;gene_biotype=protein_coding;gene_synonym=SC5G8.19c;locus_tag=SCO4851
NC_003888.3	RefSeq	CDS	5282215	5282703	.	-	0	ID=cds4803;Parent=gene4903;Dbxref=Genbank:NP_629006.1,GeneID:1100292;Name=NP_629006.1;Note=SC5G8.19c%2C unknown%2C len: 162aa;gbkey=CDS;gene=SC5G8.19c;product=hypothetical protein;protein_id=NP_629006.1;transl_table=11
NC_003888.3	RefSeq	gene	5282708	5283115	.	-	.	ID=gene4904;Dbxref=GeneID:1100293;Name=SC5G8.20c;gbkey=Gene;gene=SC5G8.20c;gene_biotype=protein_coding;gene_synonym=SC5G8.20c;locus_tag=SCO4852
NC_003888.3	RefSeq	CDS	5282708	5283115	.	-	0	ID=cds4804;Parent=gene4904;Dbxref=Genbank:NP_629007.1,GeneID:1100293;Name=NP_629007.1;Note=SC5G8.20c%2C possible integral membrane protein%2C len: 135 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5G8.20c;product=hypothetical protein;protein_id=NP_629007.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5282713	5282716	.	-	.	ID=id6168;Dbxref=GeneID:1100293;gbkey=RBS;gene=SC5G8.20c
NC_003888.3	RefSeq	ribosome_entry_site	5283119	5283123	.	-	.	ID=id6169;gbkey=RBS
NC_003888.3	RefSeq	gene	5283201	5283611	.	-	.	ID=gene4905;Dbxref=GeneID:1100294;Name=SC5G8.21c;gbkey=Gene;gene=SC5G8.21c;gene_biotype=protein_coding;gene_synonym=SC5G8.21c;locus_tag=SCO4853
NC_003888.3	RefSeq	CDS	5283201	5283611	.	-	0	ID=cds4805;Parent=gene4905;Dbxref=Genbank:NP_629008.1,GeneID:1100294;Name=NP_629008.1;Note=SC5G8.21c%2C unknown%2C len: 136 aa%3B weakly similar to other hypothetical proteins eg. TR:AAF12497 (EMBL:AE001863) from Deinococcus radiodurans (117 aa) fasta scores%3B opt: 109%2C z-score: 149.3%2C E(): 0.74%2C 26.1%25 identity in 111 aa overlap.;gbkey=CDS;gene=SC5G8.21c;product=hypothetical protein;protein_id=NP_629008.1;transl_table=11
NC_003888.3	RefSeq	gene	5283653	5284273	.	-	.	ID=gene4906;Dbxref=GeneID:1100295;Name=SC5G8.22c;gbkey=Gene;gene=SC5G8.22c;gene_biotype=protein_coding;gene_synonym=SC5G8.22c;locus_tag=SCO4854
NC_003888.3	RefSeq	CDS	5283653	5284273	.	-	0	ID=cds4806;Parent=gene4906;Dbxref=Genbank:NP_629009.1,GeneID:1100295;Name=NP_629009.1;Note=SC5G8.22c%2C possible integral membrane protein%2C len: 206aa%3B weakly similar to many eg. TR:P72920 (EMBL:D90901) hypothetical protein from Synechocystis sp. (strain PCC 6803) (181 aa) fasta scores%3B opt: 183%2C z-score: 238.4%2C E(): 8e-06%2C 28.8%25 identity in 146 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SC5G8.22c;product=hypothetical protein;protein_id=NP_629009.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5284280	5284285	.	-	.	ID=id6170;gbkey=RBS
NC_003888.3	RefSeq	gene	5284439	5285212	.	-	.	ID=gene4907;Dbxref=GeneID:1100296;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;gene_synonym=dhsB,SC5G8.23c;locus_tag=SCO4855
NC_003888.3	RefSeq	CDS	5284439	5285212	.	-	0	ID=cds4807;Parent=gene4907;Dbxref=Genbank:NP_629010.1,GeneID:1100296;Name=NP_629010.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=NP_629010.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5284484	5284729	.	-	.	ID=id6171;Dbxref=GeneID:1100296;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 32.10%2C E-value 3.9e-08;gbkey=misc_feature;gene=sdhB
NC_003888.3	RefSeq	sequence_feature	5284673	5284708	.	-	.	ID=id6172;Dbxref=GeneID:1100296;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=sdhB
NC_003888.3	RefSeq	sequence_feature	5284907	5285101	.	-	.	ID=id6173;Dbxref=GeneID:1100296;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 12.50%2C E-value 0.084;gbkey=misc_feature;gene=sdhB
NC_003888.3	RefSeq	gene	5285212	5286966	.	-	.	ID=gene4908;Dbxref=GeneID:1100297;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;gene_synonym=dhsA,SC5G8.24c;locus_tag=SCO4856
NC_003888.3	RefSeq	CDS	5285212	5286966	.	-	0	ID=cds4808;Parent=gene4908;Dbxref=Genbank:NP_629011.1,GeneID:1100297;Name=NP_629011.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=NP_629011.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5285224	5285227	.	-	.	ID=id6174;Dbxref=GeneID:1100297;gbkey=RBS;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	5285665	5286654	.	-	.	ID=id6175;Dbxref=GeneID:1100297;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 616.20%2C E-value 1.9e-181;gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	5286820	5286849	.	-	.	ID=id6176;Dbxref=GeneID:1100297;Note=PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site;gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	ribosome_entry_site	5286978	5286981	.	-	.	ID=id6177;gbkey=RBS
NC_003888.3	RefSeq	gene	5286986	5287468	.	-	.	ID=gene4909;Dbxref=GeneID:1100298;Name=SC5G8.25c;gbkey=Gene;gene=SC5G8.25c;gene_biotype=protein_coding;gene_synonym=SC5G8.25c;locus_tag=SCO4857
NC_003888.3	RefSeq	CDS	5286986	5287468	.	-	0	ID=cds4809;Parent=gene4909;Dbxref=Genbank:NP_629012.1,GeneID:1100298;Name=NP_629012.1;Note=SC5G8.25c%2C dhsD%2C possible succinate dehydrogenase membrane subunit%2C len: 160 aa%3B similar to TR:O53369 (EMBL:AL021841)  membrane anchor of succinate dehydrogenase from Mycobacterium tuberculosis (144 aa) fasta scores%3B opt: 553%2C z-score: 702.9%2C E(): 1.1e-31%2C 58.9%25 identity in 141 aa overlap. Also weakly similar to SW:P10445 (DHSD_ECOLI) succinate dehydrogenase hydrophobic membrane anchor protein from Escherichia coli (115 aa) fasta scores%3B opt: 126%2C z-score: 172.2%2C E(): 0.039%2C 23.5%25 identity in 115 aa overlap. Contains possible membrane-spanning hydrophobic regions and Pfam match to entry PF01127 Sdh_cyt%2C Succinate dehydrogenase cytochrome b subunit.;gbkey=CDS;gene=SC5G8.25c;product=succinate dehydrogenase membrane subunit;protein_id=NP_629012.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5287019	5287360	.	-	.	ID=id6178;Dbxref=GeneID:1100298;Note=Pfam match to entry PF01127 Sdh_cyt%2C Succinate dehydrogenase cytochrome b subunit%2C score -44.90%2C E-value 1.1;gbkey=misc_feature;gene=SC5G8.25c
NC_003888.3	RefSeq	gene	5287474	5287854	.	-	.	ID=gene4910;Dbxref=GeneID:1100299;Name=SC5G8.26c;gbkey=Gene;gene=SC5G8.26c;gene_biotype=protein_coding;gene_synonym=SC5G8.26c;locus_tag=SCO4858
NC_003888.3	RefSeq	CDS	5287474	5287854	.	-	0	ID=cds4810;Parent=gene4910;Dbxref=Genbank:NP_629013.1,GeneID:1100299;Name=NP_629013.1;Note=SC5G8.26c%2C dhsC%2C possible succinate dehydrogenase membrane subunit%2C len: 126aa%3B similar to many eg. TR:O53368 (EMBL:AL021841) membrane anchor of succinate dehydrogenase from Mycobacterium tuberculosis (112 aa) fasta scores%3B opt: 484%2C z-score: 649.2%2C E(): 1e-28%2C 65.7%25 identity in 99 aa overlap. Also wealky similar to SW:P10446 (DHSC_ECOLI) succinate dehydrogenase cytochrome b-556 subunit from Escherichia coli (129 aa) fasta scores%3B opt: 121%2C z-score: 173.9%2C E(): 0.031%2C 29.6%25 identity in 71 aa overlap. Contains Pfam match to entry PF01127 Sdh_cyt%2C Succinate dehydrogenase cytochrome b subunit.;gbkey=CDS;gene=SC5G8.26c;product=succinate dehydrogenase membrane subunit;protein_id=NP_629013.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5287478	5287481	.	-	.	ID=id6179;Dbxref=GeneID:1100299;gbkey=RBS;gene=SC5G8.26c
NC_003888.3	RefSeq	sequence_feature	5287525	5287836	.	-	.	ID=id6180;Dbxref=GeneID:1100299;Note=Pfam match to entry PF01127 Sdh_cyt%2C Succinate dehydrogenase cytochrome b subunit%2C score -10.40%2C E-value 0.0019;gbkey=misc_feature;gene=SC5G8.26c
NC_003888.3	RefSeq	ribosome_entry_site	5287863	5287867	.	-	.	ID=id6181;gbkey=RBS
NC_003888.3	RefSeq	gene	5288036	5288587	.	-	.	ID=gene4911;Dbxref=GeneID:1100300;Name=SC5G8.27c;gbkey=Gene;gene=SC5G8.27c;gene_biotype=protein_coding;gene_synonym=SC5G8.27c;locus_tag=SCO4859
NC_003888.3	RefSeq	CDS	5288036	5288587	.	-	0	ID=cds4811;Parent=gene4911;Dbxref=Genbank:NP_629014.1,GeneID:1100300;Name=NP_629014.1;Note=SC5G8.27c%2C unknown%2C len: 183 aa%3B similar to TR:Q9Z593 (EMBL:AL035478) hypothetical protein from Streptomyces coelicolor (191 aa) fasta scores%3B opt: 164%2C z-score: 195.7%2C E(): 0.0019%2C 32.6%25 identity in 187 aa overlap.;gbkey=CDS;gene=SC5G8.27c;product=OHCU decarboxylase;protein_id=NP_629014.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5288602	5288605	.	-	.	ID=id6182;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5288856	5288859	.	+	.	ID=id6183;gbkey=RBS
NC_003888.3	RefSeq	gene	5288869	5290443	.	+	.	ID=gene4912;Dbxref=GeneID:1100301;Name=SC5G8.28;gbkey=Gene;gene=SC5G8.28;gene_biotype=protein_coding;gene_synonym=SC5G8.28,SCK20.01;locus_tag=SCO4860
NC_003888.3	RefSeq	CDS	5288869	5290443	.	+	0	ID=cds4812;Parent=gene4912;Dbxref=Genbank:NP_733650.1,GeneID:1100301;Name=NP_733650.1;Note=SCK20.01%2C probable  hydrolase (fragment)%2C len: >465 aa%3B similar to C-terminal region of SW:HEXA_DICDI (EMBL:J04065) Dictyostelium discoideum beta-hexosaminidase A precursor (EC 3.2.1.52) NagA%2C 532 aa%3B fasta scores: opt: 343 z-score: 387.7 E(): 4.6e-14%3B 25.4%25 identity in 393 aa overlap. Contains Pfam match to entry PF00728 Glyco_hydro_20%2C Glycosyl hydrolase family 20~SC5G8.28%2C partial CDS%2C possible hypothetical protein%2C len: >94aa%3B contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;gene=SC5G8.28;product=hydrolase;protein_id=NP_733650.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5289250	5289837	.	+	.	ID=id6184;Dbxref=GeneID:1100301;Note=Pfam match to entry PF00728 Glyco_hydro_20%2C Glycosyl hydrolase family 20%2C score 71.80%2C E-value 1.9e-18;gbkey=misc_feature;gene=SC5G8.28
NC_003888.3	RefSeq	gene	5290562	5291107	.	+	.	ID=gene4913;Dbxref=GeneID:1100302;Name=SCK20.02;gbkey=Gene;gene=SCK20.02;gene_biotype=protein_coding;gene_synonym=SCK20.02;locus_tag=SCO4861
NC_003888.3	RefSeq	CDS	5290562	5291107	.	+	0	ID=cds4813;Parent=gene4913;Dbxref=Genbank:NP_629015.1,GeneID:1100302;Name=NP_629015.1;Note=SCK20.02%2C unknown%2C len: 181 aa;gbkey=CDS;gene=SCK20.02;product=hypothetical protein;protein_id=NP_629015.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5291184	5291188	.	+	.	ID=id6185;gbkey=RBS
NC_003888.3	RefSeq	gene	5291195	5291764	.	+	.	ID=gene4914;Dbxref=GeneID:1100303;Name=SCK20.03;gbkey=Gene;gene=SCK20.03;gene_biotype=protein_coding;gene_synonym=SCK20.03;locus_tag=SCO4862
NC_003888.3	RefSeq	CDS	5291195	5291764	.	+	0	ID=cds4814;Parent=gene4914;Dbxref=Genbank:NP_629016.1,GeneID:1100303;Name=NP_629016.1;Note=SCK20.03%2C unknown%2C len: 189 aa;gbkey=CDS;gene=SCK20.03;product=hypothetical protein;protein_id=NP_629016.1;transl_table=11
NC_003888.3	RefSeq	gene	5291932	5292354	.	+	.	ID=gene4915;Dbxref=GeneID:1100304;Name=SCK20.04;gbkey=Gene;gene=SCK20.04;gene_biotype=protein_coding;gene_synonym=SCK20.04;locus_tag=SCO4863
NC_003888.3	RefSeq	CDS	5291932	5292354	.	+	0	ID=cds4815;Parent=gene4915;Dbxref=Genbank:NP_629017.1,GeneID:1100304;Name=NP_629017.1;Note=SCK20.04%2C unknown%2C len: 140 aa;gbkey=CDS;gene=SCK20.04;product=hypothetical protein;protein_id=NP_629017.1;transl_table=11
NC_003888.3	RefSeq	gene	5292421	5293098	.	+	.	ID=gene4916;Dbxref=GeneID:1100305;Name=SCK20.05;gbkey=Gene;gene=SCK20.05;gene_biotype=protein_coding;gene_synonym=SCK20.05;locus_tag=SCO4864
NC_003888.3	RefSeq	CDS	5292421	5293098	.	+	0	ID=cds4816;Parent=gene4916;Dbxref=Genbank:NP_629018.1,GeneID:1100305;Name=NP_629018.1;Note=SCK20.05%2C possible ECF sigma factor%2C len: 225 aa%3B similar to TR:Q9RIT1 (EMBL:AJ010584) Streptomyces coelicolor ECF sigma factor%2C 264 aa%3B fasta scores: opt: 296 z-score: 342.7 E(): 1.5e-11%3B 34.0%25 identity in 212 aa overlap and to Streptomyces coelicolor ECF sigma factor SCK20.07%2C 220 aa%3B fasta scores: opt: 671 z-score: 656.4 E(): 6.9e-31%3B 59.5%25 identity in 185 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=SCK20.05;product=ECF sigma factor;protein_id=NP_629018.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5292613	5292777	.	+	.	ID=id6186;Dbxref=GeneID:1100305;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 34.80%2C E-value 1.9e-06;gbkey=misc_feature;gene=SCK20.05
NC_003888.3	RefSeq	ribosome_entry_site	5293086	5293089	.	+	.	ID=id6187;Dbxref=GeneID:1100305;gbkey=RBS;gene=SCK20.05
NC_003888.3	RefSeq	gene	5293095	5294015	.	+	.	ID=gene4917;Dbxref=GeneID:1100306;Name=SCK20.06;gbkey=Gene;gene=SCK20.06;gene_biotype=protein_coding;gene_synonym=SCK20.06;locus_tag=SCO4865
NC_003888.3	RefSeq	CDS	5293095	5294015	.	+	0	ID=cds4817;Parent=gene4917;Dbxref=Genbank:NP_629019.1,GeneID:1100306;Name=NP_629019.1;Note=SCK20.06%2C unknown%2C len: 306 aa. High G+C content (82.13%25);gbkey=CDS;gene=SCK20.06;product=hypothetical protein;protein_id=NP_629019.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5293491	5293667	.	+	.	ID=id6188;Dbxref=GeneID:1100306;Note=High content in proline%2C threonine and alanine amino acid residues. High content in G+C (86.44%25);gbkey=misc_feature;gene=SCK20.06
NC_003888.3	RefSeq	gene	5294399	5295061	.	+	.	ID=gene4918;Dbxref=GeneID:1100307;Name=SCK20.07;gbkey=Gene;gene=SCK20.07;gene_biotype=protein_coding;gene_synonym=SCK20.07;locus_tag=SCO4866
NC_003888.3	RefSeq	CDS	5294399	5295061	.	+	0	ID=cds4818;Parent=gene4918;Dbxref=Genbank:NP_629020.1,GeneID:1100307;Name=NP_629020.1;Note=SCK20.07%2C possible ECF sigma factor%2C len: 220 aa%3B similar to TR:Q9RIT1 (EMBL:AJ010584) Streptomyces coelicolor ECF sigma factor%2C 264 aa%3B fasta scores: opt: 280 z-score: 329.1 E(): 8.5e-11%3B 31.9%25 identity in 182 aa overlap and to Streptomyces coelicolor ECF sigma factor SCK20.05%2C 225 aa%3B fasta scores: opt: 671 z-score: 614.8 E(): 1.4e-28%3B 59.5%25 identity in 185 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=SCK20.07;product=ECF sigma factor;protein_id=NP_629020.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5294504	5294671	.	+	.	ID=id6189;Dbxref=GeneID:1100307;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 33.90%2C E-value 3.6e-06;gbkey=misc_feature;gene=SCK20.07
NC_003888.3	RefSeq	gene	5295061	5296242	.	+	.	ID=gene4919;Dbxref=GeneID:1100308;Name=SCK20.08;gbkey=Gene;gene=SCK20.08;gene_biotype=protein_coding;gene_synonym=SCK20.08;locus_tag=SCO4867
NC_003888.3	RefSeq	CDS	5295061	5296242	.	+	0	ID=cds4819;Parent=gene4919;Dbxref=Genbank:NP_629021.1,GeneID:1100308;Name=NP_629021.1;Note=SCK20.08%2C possible membrane protein%2C len: 393 aa. Contains possible hydrophobic membrane spanning regions and 2x degenerate repeat at C-terminal region: PHHP(A/D)R;gbkey=CDS;gene=SCK20.08;product=hypothetical protein;protein_id=NP_629021.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5295907	5296113	.	+	.	ID=id6190;Dbxref=GeneID:1100308;Note=High content in glycine%2C aspartic and lysine amino acid residues;gbkey=misc_feature;gene=SCK20.08
NC_003888.3	RefSeq	sequence_feature	5296135	5296170	.	+	.	ID=id6191;Dbxref=GeneID:1100308;Note=2x degenerate repeat translated in SCK20.08;gbkey=misc_feature;gene=SCK20.08
NC_003888.3	RefSeq	gene	5296485	5297330	.	-	.	ID=gene4920;Dbxref=GeneID:1100309;Name=SCK20.09c;gbkey=Gene;gene=SCK20.09c;gene_biotype=protein_coding;gene_synonym=SCK20.09c;locus_tag=SCO4868
NC_003888.3	RefSeq	CDS	5296485	5297330	.	-	0	ID=cds4820;Parent=gene4920;Dbxref=Genbank:NP_629022.1,GeneID:1100309;Name=NP_629022.1;Note=SCK20.09c%2C possible lipoprotein%2C len: 281 aa%3B similar to TR:CAC14938 (EMBL:AL449216) Streptomyces coelicolor hypothetical protein 3SC5B7.14c%2C 231 aa%3B fasta scores: opt: 330 z-score: 353.2 E(): 3.9e-12%3B 35.3%25 identity in 218 aa overlap. Contains Pfam match to entry PF01471 PG_binding_1%2C  peptidoglycan binding domain and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCK20.09c;product=lipoprotein;protein_id=NP_629022.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5296908	5297090	.	-	.	ID=id6192;Dbxref=GeneID:1100309;Note=Pfam match to entry PF01471 PG_binding_1%2C  peptidoglycan binding domain%2C score 25.80%2C E-value 0.00029;gbkey=misc_feature;gene=SCK20.09c
NC_003888.3	RefSeq	sequence_feature	5297253	5297285	.	-	.	ID=id6193;Dbxref=GeneID:1100309;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCK20.09c
NC_003888.3	RefSeq	ribosome_entry_site	5297545	5297549	.	+	.	ID=id6194;gbkey=RBS
NC_003888.3	RefSeq	gene	5297557	5299161	.	+	.	ID=gene4921;Dbxref=GeneID:1100310;Name=mutA2;gbkey=Gene;gene=mutA2;gene_biotype=protein_coding;gene_synonym=mutA2,SCK20.10;locus_tag=SCO4869
NC_003888.3	RefSeq	CDS	5297557	5299161	.	+	0	ID=cds4821;Parent=gene4921;Dbxref=Genbank:NP_629023.1,GeneID:1100310;Name=NP_629023.1;Note=SCK20.10%2C mutA2%2C methylmalonyl CoA mutase%2C len: 534 aa%3B highly similar to SW:MUTA_HUMAN (EMBL:M65131) Homo sapiens methylmalonyl CoA mutase mitochondrial precursor (EC 5.4.99.2) Mut%2C 750 aa%3B fasta scores: opt: 1707 z-score: 1912.4 E(): 0%3B 49.6%25 identity in 534 aa overlap and almost identical to TR:Q9L1V3 (EMBL:AL138668) Streptomyces coelicolor methylmalonyl CoA mutase mutA SC4A9.09%2C 531 aa%3B fasta scores: opt: 3319 z-score: 3721.0 E(): 0%3B 97.0%25 identity in 528 aa overlap. Contains Pfam match to entry PF01642 MM_CoA_mutase%2C Methylmalonyl-CoA mutase;gbkey=CDS;gene=mutA2;product=methylmalonyl CoA mutase;protein_id=NP_629023.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5297704	5299158	.	+	.	ID=id6195;Dbxref=GeneID:1100310;Note=Pfam match to entry PF01642 MM_CoA_mutase%2C Methylmalonyl-CoA mutase%2C score 869.20%2C E-value 1.3e-257;gbkey=misc_feature;gene=mutA2
NC_003888.3	RefSeq	gene	5299181	5300632	.	-	.	ID=gene4922;Dbxref=GeneID:1100311;Name=SCK20.11c;gbkey=Gene;gene=SCK20.11c;gene_biotype=protein_coding;gene_synonym=SCK20.11c;locus_tag=SCO4870
NC_003888.3	RefSeq	CDS	5299181	5300632	.	-	0	ID=cds4822;Parent=gene4922;Dbxref=Genbank:NP_629024.1,GeneID:1100311;Name=NP_629024.1;Note=SCK20.11c%2C probable monooxygenase%2C len: 483 aa%3B similar to TR:P95598 (EMBL:U56415) Corynebacterium equii rifampin monooxygenase Iri%2C 479 aa%3B fasta scores: opt: 691 z-score: 714.1 E(): 3.1e-32%3B 35.0%25 identity in 488 aa overlap and to TR:O86481 (EMBL:AJ007932) Streptomyces argillaceus oxygenase MtmOII%2C 531 aa%3B fasta scores: opt: 590 z-score: 609.9 E(): 1.9e-26%3B 33.3%25 identity in 520 aa overlap. Contains Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain and match PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SCK20.11c;product=hypothetical protein;protein_id=NP_629024.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5299562	5300140	.	-	.	ID=id6196;Dbxref=GeneID:1100311;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 182.50%2C E-value 6.8e-51;gbkey=misc_feature;gene=SCK20.11c
NC_003888.3	RefSeq	sequence_feature	5300153	5300581	.	-	.	ID=id6197;Dbxref=GeneID:1100311;Note=Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain%2C score 100.30%2C E-value 3.7e-26;gbkey=misc_feature;gene=SCK20.11c
NC_003888.3	RefSeq	ribosome_entry_site	5300640	5300645	.	-	.	ID=id6198;gbkey=RBS
NC_003888.3	RefSeq	gene	5300705	5301355	.	+	.	ID=gene4923;Dbxref=GeneID:1100312;Name=SCK20.12;gbkey=Gene;gene=SCK20.12;gene_biotype=protein_coding;gene_synonym=SCK20.12;locus_tag=SCO4871
NC_003888.3	RefSeq	CDS	5300705	5301355	.	+	0	ID=cds4823;Parent=gene4923;Dbxref=Genbank:NP_629025.1,GeneID:1100312;Name=NP_629025.1;Note=SCK20.12%2C probable tetR-family transcriptional regulator%2C len: 216 aa%3B similar to SW:TER1_ECOLI (EMBL:X61367) Escherichia coli tetracycline repressor protein class A TetR%2C 216 aa%3B fasta scores: opt: 437 z-score: 544.2 E(): 8.9e-23%3B 43.2%25 identity in 199 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 30..51 (+5.12 SD);gbkey=CDS;gene=SCK20.12;product=TetR family transcriptional regulator;protein_id=NP_629025.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5300744	5300884	.	+	.	ID=id6199;Dbxref=GeneID:1100312;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 63.60%2C E-value 4.3e-15;gbkey=misc_feature;gene=SCK20.12
NC_003888.3	RefSeq	gene	5301340	5302356	.	-	.	ID=gene4924;Dbxref=GeneID:1100313;Name=SCK20.13c;gbkey=Gene;gene=SCK20.13c;gene_biotype=protein_coding;gene_synonym=SCK20.13c;locus_tag=SCO4872
NC_003888.3	RefSeq	CDS	5301340	5302356	.	-	0	ID=cds4824;Parent=gene4924;Dbxref=Genbank:NP_629026.1,GeneID:1100313;Name=NP_629026.1;Note=SCK20.13c%2C unknown%2C len: 338 aa;gbkey=CDS;gene=SCK20.13c;product=hypothetical protein;protein_id=NP_629026.1;transl_table=11
NC_003888.3	RefSeq	gene	5302468	5303406	.	-	.	ID=gene4925;Dbxref=GeneID:1100314;Name=SCK20.14c;gbkey=Gene;gene=SCK20.14c;gene_biotype=protein_coding;gene_synonym=SCK20.14c;locus_tag=SCO4873
NC_003888.3	RefSeq	CDS	5302468	5303406	.	-	0	ID=cds4825;Parent=gene4925;Dbxref=Genbank:NP_629027.1,GeneID:1100314;Name=NP_629027.1;Note=SCK20.14c%2C unknown%2C len: 312 aa;gbkey=CDS;gene=SCK20.14c;product=hypothetical protein;protein_id=NP_629027.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5303417	5303420	.	-	.	ID=id6200;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	5303493	5303700	.	+	.	ID=id6201;Note=Low G+C content (55.76%25);gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5303633	5303638	.	+	.	ID=id6202;Note=AseI restriction site (ATTAAT)~Cleavage site for AseI restriction endonuclease AT*TAAT;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5303633	5303638	.	-	.	ID=id6203;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5303719	5306604	.	+	.	ID=gene4926;Dbxref=GeneID:1100315;Name=SCK20.15;gbkey=Gene;gene=SCK20.15;gene_biotype=protein_coding;gene_synonym=SCK20.15;locus_tag=SCO4874
NC_003888.3	RefSeq	CDS	5303719	5306604	.	+	0	ID=cds4826;Parent=gene4926;Dbxref=Genbank:NP_629028.1,GeneID:1100315;Name=NP_629028.1;Note=SCK20.15%2C possible integral membrane protein%2C len: 961 aa. Contains match to Prosite entry PS01125 ROK family signature. Also contains 4x degenerate repeat: DRA(S/A)G and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK20.15;product=hypothetical protein;protein_id=NP_629028.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5304496	5304573	.	+	.	ID=id6204;Dbxref=GeneID:1100315;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SCK20.15
NC_003888.3	RefSeq	sequence_feature	5305048	5305206	.	+	.	ID=id6205;Dbxref=GeneID:1100315;Note=region high in alanine and glycine amino acid residues. High G+C (80.50%25) also;gbkey=misc_feature;gene=SCK20.15
NC_003888.3	RefSeq	sequence_feature	5305837	5305896	.	+	.	ID=id6206;Dbxref=GeneID:1100315;Note=4x degenerate repeat translated into SCK20.15;gbkey=misc_feature;gene=SCK20.15
NC_003888.3	RefSeq	ribosome_entry_site	5306614	5306617	.	+	.	ID=id6207;gbkey=RBS
NC_003888.3	RefSeq	gene	5306624	5307574	.	+	.	ID=gene4927;Dbxref=GeneID:1100316;Name=2SCK8.01;gbkey=Gene;gene=2SCK8.01;gene_biotype=protein_coding;gene_synonym=2SCK8.01,SCK20.16;locus_tag=SCO4875
NC_003888.3	RefSeq	CDS	5306624	5307574	.	+	0	ID=cds4827;Parent=gene4927;Dbxref=Genbank:NP_733651.1,GeneID:1100316;Name=NP_733651.1;Note=2SCK8.01%2C probable sugar transferase (fragment)%2C len: >256 aa%3B similar to SW:GTRB_BPSFX (EMBL:AF056939) Bacteriophage SfX (Shigella flexneri bacteriophage X) bactoprenol glucosyl transferase (EC 2.4.1.*) GtrB%2C 305 aa%3B fasta scores: opt: 659 z-score: 787.3 E(): 0%3B 42.3%25 identity in 246 aa overlap and to middle part of TR:O86666 (EMBL:AL031182) Streptomyces coelicolor sugar transferase SC4A2.10c%2C 478 aa%3B fasta scores: opt: 1022 z-score: 1213.9 E(): 0%3B 61.5%25 identity in 247 aa overlap. Contains possible hydrophobic membrane spanning regions at C-terminal domain~SCK20.16%2C probable transferase (fragment)%2C len: >92 aa%3B similar to N-terminal region of SW:GTRB_BPSF5 (EMBL:U82619) Shigella flexneri bacteriophage V bactoprenol glucosyl transferase (EC 2.4.1.-) GtrB%2C 307 aa%3B fasta scores: opt: 264 z-score: 364.3 E(): 9.3e-13%3B 47.3%25 identity in 91 aa overlap and to N-terminal region of TR:O86666 (EMBL:AL031182) Streptomyces coelicolor sugar transferase SC4A2.10c%2C 478 aa%3B fasta scores: opt: 341 z-score: 431.2 E(): 2.4e-18%3B 61.1%25 identity in 90 aa overlap;gbkey=CDS;gene=2SCK8.01;product=sugar transferase;protein_id=NP_733651.1;transl_table=11
NC_003888.3	RefSeq	gene	5307574	5308020	.	+	.	ID=gene4928;Dbxref=GeneID:1100317;Name=2SCK8.02;gbkey=Gene;gene=2SCK8.02;gene_biotype=protein_coding;gene_synonym=2SCK8.02;locus_tag=SCO4876
NC_003888.3	RefSeq	CDS	5307574	5308020	.	+	0	ID=cds4828;Parent=gene4928;Dbxref=Genbank:NP_629029.1,GeneID:1100317;Name=NP_629029.1;Note=2SCK8.02%2C possible sugar translocase%2C len: 148 aa%3B similar to SW:GTRA_BPP22 (EMBL:AF217253) Bacteriophage P22 bactoprenol-linked glucose translocase GtrA%2C 120 aa%3B fasta scores: opt: 121 z-score: 160.1 E(): 0.24%3B 24.2%25 identity in 124 aa overlap and to C-terminal part of TR:O86666 (EMBL:AL031182) Streptomyces coelicolor sugar transferase SC4A2.10c%2C 478 aa%3B fasta scores: opt: 349 z-score: 420.7 E(): 7.2e-16%3B 42.4%25 identity in 125 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK8.02;product=sugar translocase;protein_id=NP_629029.1;transl_table=11
NC_003888.3	RefSeq	gene	5308045	5309379	.	-	.	ID=gene4929;Dbxref=GeneID:1100318;Name=2SCK8.03c;gbkey=Gene;gene=2SCK8.03c;gene_biotype=protein_coding;gene_synonym=2SCK8.03c;locus_tag=SCO4877
NC_003888.3	RefSeq	CDS	5308045	5309379	.	-	0	ID=cds4829;Parent=gene4929;Dbxref=Genbank:NP_629030.1,GeneID:1100318;Name=NP_629030.1;Note=2SCK8.03c%2C unknown%2C len: 444 aa;gbkey=CDS;gene=2SCK8.03c;product=hypothetical protein;protein_id=NP_629030.1;transl_table=11
NC_003888.3	RefSeq	gene	5309376	5310356	.	-	.	ID=gene4930;Dbxref=GeneID:1100319;Name=2SCK8.04c;gbkey=Gene;gene=2SCK8.04c;gene_biotype=protein_coding;gene_synonym=2SCK8.04c;locus_tag=SCO4878
NC_003888.3	RefSeq	CDS	5309376	5310356	.	-	0	ID=cds4830;Parent=gene4930;Dbxref=Genbank:NP_629031.1,GeneID:1100319;Name=NP_629031.1;Note=2SCK8.04c%2C possible glycosyltransferase%2C len: 326 aa%3B similar to TR:AAG44714 (EMBL:AF267127) Lactobacillus delbrueckii glycosyltransferase EpsJ%2C 327 aa%3B fasta scores: opt: 319 z-score: 393.4 E(): 2.5e-14%3B 30.5%25 identity in 236 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases;gbkey=CDS;gene=2SCK8.04c;product=glycosyltransferase;protein_id=NP_629031.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5309385	5309391	.	-	.	ID=id6208;Dbxref=GeneID:1100319;gbkey=RBS;gene=2SCK8.04c
NC_003888.3	RefSeq	sequence_feature	5309832	5310344	.	-	.	ID=id6209;Dbxref=GeneID:1100319;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 144.80%2C E-value 1.5e-39;gbkey=misc_feature;gene=2SCK8.04c
NC_003888.3	RefSeq	gene	5310555	5311886	.	+	.	ID=gene4931;Dbxref=GeneID:1100320;Name=2SCK8.05;gbkey=Gene;gene=2SCK8.05;gene_biotype=protein_coding;gene_synonym=2SCK8.05;locus_tag=SCO4879
NC_003888.3	RefSeq	CDS	5310555	5311886	.	+	0	ID=cds4831;Parent=gene4931;Dbxref=Genbank:NP_629032.1,GeneID:1100320;Name=NP_629032.1;Note=2SCK8.05%2C hypothetical protein%2C len: 443 aa%3B central region presents low similarity with TR:Q9K1M6 (EMBL:AE002366) Neisseria meningitidis hypothetical protein NMB0065%2C 308 aa%3B fasta scores: opt: 341 z-score: 354.4 E(): 3.6e-12%3B 26.6%25 identity in 334 aa overlap;gbkey=CDS;gene=2SCK8.05;product=hypothetical protein;protein_id=NP_629032.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5312061	5312066	.	+	.	ID=id6210;gbkey=RBS
NC_003888.3	RefSeq	gene	5312075	5313349	.	+	.	ID=gene4932;Dbxref=GeneID:1100321;Name=2SCK8.06;gbkey=Gene;gene=2SCK8.06;gene_biotype=protein_coding;gene_synonym=2SCK8.06;locus_tag=SCO4880
NC_003888.3	RefSeq	CDS	5312075	5313349	.	+	0	ID=cds4832;Parent=gene4932;Dbxref=Genbank:NP_629033.1,GeneID:1100321;Name=NP_629033.1;Note=2SCK8.06%2C possible transferase%2C len: 424 aa%3B similar to TR:O88719 (EMBL:AJ006215) Mus musculus CMP-N-acetylneuraminic acid synthetase (EC 2.7.7.43) CmaS%2C 432 aa%3B fasta scores: opt: 361 z-score: 400.1 E(): 1e-14%3B 30.3%25 identity in 389 aa overlap. Contains Pfam matches to entries PF02348 Cytidylyl_trans%2C Cytidylyl transferase and PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase;gbkey=CDS;gene=2SCK8.06;product=transferase;protein_id=NP_629033.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5312120	5312842	.	+	.	ID=id6211;Dbxref=GeneID:1100321;Note=Pfam match to entry PF02348 Cytidylyl_trans%2C Cytidylyl transferase%2C score 69.20%2C E-value 8.5e-17;gbkey=misc_feature;gene=2SCK8.06
NC_003888.3	RefSeq	sequence_feature	5312471	5313199	.	+	.	ID=id6212;Dbxref=GeneID:1100321;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 11.40%2C E-value 0.024;gbkey=misc_feature;gene=2SCK8.06
NC_003888.3	RefSeq	gene	5313363	5314301	.	+	.	ID=gene4933;Dbxref=GeneID:1100322;Name=2SCK8.07;gbkey=Gene;gene=2SCK8.07;gene_biotype=protein_coding;gene_synonym=2SCK8.07;locus_tag=SCO4881
NC_003888.3	RefSeq	CDS	5313363	5314301	.	+	0	ID=cds4833;Parent=gene4933;Dbxref=Genbank:NP_629034.1,GeneID:1100322;Name=NP_629034.1;Note=2SCK8.07%2C possible polysaccharide biosynthesis related protein%2C len: 312 aa%3B similar to SW:SPSE_BACSU (EMBL:X73124) Bacillus subtilis spore coat polysaccharide biosynthesis protein SpsE%2C 373 aa%3B fasta scores: opt: 473 z-score: 554.3 E(): 2.6e-23%3B 32.2%25 identity in 295 aa overlap and to TR:Q9NR45 (EMBL:AF257466) Homo sapiens N-acetylneuraminic acid phosphate synthase%2C 359 aa%3B fasta scores: opt: 660 z-score: 771.2 E(): 0%3B 38.4%25 identity in 294 aa overlap. Contains matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00639 Eukaryotic thiol (cysteine) proteases histidine active site;gbkey=CDS;gene=2SCK8.07;product=polysaccharide biosynthesis-like protein;protein_id=NP_629034.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5313798	5313821	.	+	.	ID=id6213;Dbxref=GeneID:1100322;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCK8.07
NC_003888.3	RefSeq	sequence_feature	5313858	5313890	.	+	.	ID=id6214;Dbxref=GeneID:1100322;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site;gbkey=misc_feature;gene=2SCK8.07
NC_003888.3	RefSeq	gene	5314345	5315412	.	+	.	ID=gene4934;Dbxref=GeneID:1100323;Name=2SCK8.08;gbkey=Gene;gene=2SCK8.08;gene_biotype=protein_coding;gene_synonym=2SCK8.08;locus_tag=SCO4882
NC_003888.3	RefSeq	CDS	5314345	5315412	.	+	0	ID=cds4834;Parent=gene4934;Dbxref=Genbank:NP_629035.1,GeneID:1100323;Name=NP_629035.1;Note=2SCK8.08%2C unknown%2C len: 355 aa;gbkey=CDS;gene=2SCK8.08;product=hypothetical protein;protein_id=NP_629035.1;transl_table=11
NC_003888.3	RefSeq	gene	5315652	5316884	.	+	.	ID=gene4935;Dbxref=GeneID:1100324;Name=2SCK8.09;gbkey=Gene;gene=2SCK8.09;gene_biotype=protein_coding;gene_synonym=2SCK8.09;locus_tag=SCO4883
NC_003888.3	RefSeq	CDS	5315652	5316884	.	+	0	ID=cds4835;Parent=gene4935;Dbxref=Genbank:NP_629036.1,GeneID:1100324;Name=NP_629036.1;Note=2SCK8.09%2C probable peptidase%2C len: 410 aa%3B similar to SW:CBPX_SULSO (EMBL:Z48497) Sulfolobus solfataricus thermostable carboxypeptidase (EC 3.4.17.*) CpsA%2C 393 aa%3B fasta scores: opt: 687 z-score: 803.2 E(): 0%3B 32.0%25 identity in 372 aa overlap. Contains Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40;gbkey=CDS;gene=2SCK8.09;product=peptidase;protein_id=NP_629036.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5315721	5316704	.	+	.	ID=id6215;Dbxref=GeneID:1100324;Note=Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40%2C score 100.40%2C E-value 7.2e-28;gbkey=misc_feature;gene=2SCK8.09
NC_003888.3	RefSeq	gene	5317104	5318147	.	+	.	ID=gene4936;Dbxref=GeneID:1100325;Name=2SCK8.10;gbkey=Gene;gene=2SCK8.10;gene_biotype=protein_coding;gene_synonym=2SCK8.10;locus_tag=SCO4884
NC_003888.3	RefSeq	CDS	5317104	5318147	.	+	0	ID=cds4836;Parent=gene4936;Dbxref=Genbank:NP_629037.1,GeneID:1100325;Name=NP_629037.1;Note=2SCK8.10%2C probable lipoprotein%2C len: 347 aa%3B similar to SW:YUFN_BACSU (EMBL:Z93937) Bacillus subtilis hypothetical lipoprotein precursor YufN%2C 350 aa%3B fasta scores: opt: 690 z-score: 727.5 E(): 0%3B 37.4%25 identity in 348 aa overlap%2C to TR:CAC14304 (EMBL:AJ276209) Clostridium sticklandii substrate binding lipoprotein precursor of an ABC transporter BmpA%2C 349 aa%3B fasta scores: opt: 557 z-score: 589.0 E(): 3.1e-25%3B 36.6%25 identity in 352 aa overlap and to Streptomyces coelicolor probable lipoprotein 2SCK8.11%2C 348 aa%3B fasta scores: opt: 1727 z-score: 1625.1 E(): 0%3B 78.4%25 identity in 347 aa overlap. Contains Pfam match to entry PF02608 Bmp and properly positioned match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCK8.10;product=lipoprotein;protein_id=NP_629037.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5317140	5318141	.	+	.	ID=id6216;Dbxref=GeneID:1100325;Note=Pfam match to entry PF02608 Bmp%2C %2C score 207.30%2C E-value 2.4e-58;gbkey=misc_feature;gene=2SCK8.10
NC_003888.3	RefSeq	sequence_feature	5317143	5317175	.	+	.	ID=id6217;Dbxref=GeneID:1100325;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCK8.10
NC_003888.3	RefSeq	ribosome_entry_site	5318407	5318412	.	+	.	ID=id6218;gbkey=RBS
NC_003888.3	RefSeq	gene	5318421	5319467	.	+	.	ID=gene4937;Dbxref=GeneID:1100326;Name=2SCK8.11;gbkey=Gene;gene=2SCK8.11;gene_biotype=protein_coding;gene_synonym=2SCK8.11;locus_tag=SCO4885
NC_003888.3	RefSeq	CDS	5318421	5319467	.	+	0	ID=cds4837;Parent=gene4937;Dbxref=Genbank:NP_629038.1,GeneID:1100326;Name=NP_629038.1;Note=2SCK8.11%2C probable lipoprotein%2C len: 348 aa%3B similar to SW:YUFN_BACSU (EMBL:Z93937) Bacillus subtilis hypothetical lipoprotein precursor YufN%2C 350 aa%3B fasta scores: opt: 663 z-score: 689.2 E(): 8e-31%3B 36.8%25 identity in 334 aa overlap%2C to TR:CAC14304 (EMBL:AJ276209) Clostridium sticklandii substrate binding lipoprotein precursor of an ABC transporter BmpA%2C 349 aa%3B fasta scores: opt: 560 z-score: 583.6 E(): 6e-25%3B 36.1%25 identity in 355 aa overlap and to Streptomyces coelicolor probable lipoprotein 2SCK8.10%2C 347 aa%3B fasta scores: opt: 1727 z-score: 1622.6 E(): 0%3B 78.4%25 identity in 347 aa overlap. Contains Pfam match to entry PF02608 Bmp and properly positioned match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCK8.11;product=lipoprotein;protein_id=NP_629038.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5318457	5319461	.	+	.	ID=id6219;Dbxref=GeneID:1100326;Note=Pfam match to entry PF02608 Bmp%2C %2C score 228.20%2C E-value 1.2e-64;gbkey=misc_feature;gene=2SCK8.11
NC_003888.3	RefSeq	sequence_feature	5318460	5318492	.	+	.	ID=id6220;Dbxref=GeneID:1100326;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCK8.11
NC_003888.3	RefSeq	stem_loop	5319510	5319595	.	+	.	ID=id6221;Note=possible stem loop. Score 52: 31/42 (73%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5319704	5321317	.	+	.	ID=gene4938;Dbxref=GeneID:1100327;Name=2SCK8.12;gbkey=Gene;gene=2SCK8.12;gene_biotype=protein_coding;gene_synonym=2SCK8.12;locus_tag=SCO4886
NC_003888.3	RefSeq	CDS	5319704	5321317	.	+	0	ID=cds4838;Parent=gene4938;Dbxref=Genbank:NP_629039.1,GeneID:1100327;Name=NP_629039.1;Note=2SCK8.12%2C probable sugar ABC transporter ATP-binding protein%2C len: 537 aa%3B similar to SW:MGLA_ECOLI (EMBL:M59444) Escherichia coli galactoside transport ATP-binding protein MglA%2C 506 aa%3B fasta scores: opt: 1019 z-score: 1013.7 E(): 0%3B 35.6%25 identity in 486 aa overlap. Contains 2x Pfam matches to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=2SCK8.12;product=sugar ABC transporter ATP-binding protein;protein_id=NP_629039.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5319788	5320339	.	+	.	ID=id6222;Dbxref=GeneID:1100327;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 160.60%2C E-value 2.7e-44;gbkey=misc_feature;gene=2SCK8.12
NC_003888.3	RefSeq	sequence_feature	5319809	5319832	.	+	.	ID=id6223;Dbxref=GeneID:1100327;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCK8.12
NC_003888.3	RefSeq	sequence_feature	5320538	5321122	.	+	.	ID=id6224;Dbxref=GeneID:1100327;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 69.10%2C E-value 9.6e-17;gbkey=misc_feature;gene=2SCK8.12
NC_003888.3	RefSeq	sequence_feature	5320895	5320939	.	+	.	ID=id6225;Dbxref=GeneID:1100327;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SCK8.12
NC_003888.3	RefSeq	ribosome_entry_site	5321306	5321309	.	+	.	ID=id6226;Dbxref=GeneID:1100327;gbkey=RBS;gene=2SCK8.12
NC_003888.3	RefSeq	gene	5321317	5322441	.	+	.	ID=gene4939;Dbxref=GeneID:1100328;Name=2SCK8.13;gbkey=Gene;gene=2SCK8.13;gene_biotype=protein_coding;gene_synonym=2SCK8.13;locus_tag=SCO4887
NC_003888.3	RefSeq	CDS	5321317	5322441	.	+	0	ID=cds4839;Parent=gene4939;Dbxref=Genbank:NP_629040.1,GeneID:1100328;Name=NP_629040.1;Note=2SCK8.13%2C probable sugar ABC transporter integral membrane protein%2C len: 374 aa%3B similar to TR:CAC14306 (EMBL:AJ276209) Clostridium sticklandii permease 1 of an ABC transporter RbsC-1%2C 354 aa%3B fasta scores: opt: 623 z-score: 693.9 E(): 4.4e-31%3B 33.3%25 identity in 342 aa overlap. Contains Pfam match to entry PF02653 BPD_transp_2 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK8.13;product=sugar ABC transporter integral membrane protein;protein_id=NP_629040.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5321467	5322348	.	+	.	ID=id6227;Dbxref=GeneID:1100328;Note=Pfam match to entry PF02653 BPD_transp_2%2C %2C score -41.50%2C E-value 0.0013;gbkey=misc_feature;gene=2SCK8.13
NC_003888.3	RefSeq	ribosome_entry_site	5322421	5322429	.	+	.	ID=id6228;Dbxref=GeneID:1100328;gbkey=RBS;gene=2SCK8.13
NC_003888.3	RefSeq	gene	5322438	5323712	.	+	.	ID=gene4940;Dbxref=GeneID:1100329;Name=2SCK8.14;gbkey=Gene;gene=2SCK8.14;gene_biotype=protein_coding;gene_synonym=2SCK8.14;locus_tag=SCO4888
NC_003888.3	RefSeq	CDS	5322438	5323712	.	+	0	ID=cds4840;Parent=gene4940;Dbxref=Genbank:NP_629041.1,GeneID:1100329;Name=NP_629041.1;Note=2SCK8.14%2C probable sugar ABC transporter integral membrane protein%2C len: 424 aa%3B similar to TR:Q9WXW0 (EMBL:AE001696) Thermotoga maritima sugar ABC transporter%2C permease TM0105%2C 319 aa%3B fasta scores: opt: 395 z-score: 433.3 E(): 1.4e-16%3B 36.9%25 identity in 279 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK8.14;product=sugar ABC transporter integral membrane protein;protein_id=NP_629041.1;transl_table=11
NC_003888.3	RefSeq	gene	5323709	5324101	.	+	.	ID=gene4941;Dbxref=GeneID:1100330;Name=2SCK8.15;gbkey=Gene;gene=2SCK8.15;gene_biotype=protein_coding;gene_synonym=2SCK8.15;locus_tag=SCO4889
NC_003888.3	RefSeq	CDS	5323709	5324101	.	+	0	ID=cds4841;Parent=gene4941;Dbxref=Genbank:NP_629042.1,GeneID:1100330;Name=NP_629042.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;gene=2SCK8.15;product=cytidine deaminase;protein_id=NP_629042.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5323772	5324020	.	+	.	ID=id6229;Dbxref=GeneID:1100330;Note=Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region%2C score 47.60%2C E-value 2.8e-10;gbkey=misc_feature;gene=2SCK8.15
NC_003888.3	RefSeq	sequence_feature	5323874	5323996	.	+	.	ID=id6230;Dbxref=GeneID:1100330;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature;gbkey=misc_feature;gene=2SCK8.15
NC_003888.3	RefSeq	gene	5324126	5325409	.	+	.	ID=gene4942;Dbxref=GeneID:1100331;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;gene_synonym=2SCK8.16;locus_tag=SCO4890
NC_003888.3	RefSeq	CDS	5324126	5325409	.	+	0	ID=cds4842;Parent=gene4942;Dbxref=Genbank:NP_629043.1,GeneID:1100331;Name=NP_629043.1;Note=Catalyzes the reversible phosphorolysis of thymidine%2C deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate;gbkey=CDS;gene=deoA;product=thymidine phosphorylase;protein_id=NP_629043.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5324144	5324593	.	+	.	ID=id6231;Dbxref=GeneID:1100331;Note=Pfam match to entry PF00591 Glycos_transf_3%2C glycosyl transferase family%2C score 145.40%2C E-value 1e-39;gbkey=misc_feature;gene=deoA
NC_003888.3	RefSeq	sequence_feature	5324459	5324506	.	+	.	ID=id6232;Dbxref=GeneID:1100331;Note=PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature;gbkey=misc_feature;gene=deoA
NC_003888.3	RefSeq	gene	5325467	5325853	.	-	.	ID=gene4943;Dbxref=GeneID:1100332;Name=2SCK8.17c;gbkey=Gene;gene=2SCK8.17c;gene_biotype=protein_coding;gene_synonym=2SCK8.17c;locus_tag=SCO4891
NC_003888.3	RefSeq	CDS	5325467	5325853	.	-	0	ID=cds4843;Parent=gene4943;Dbxref=Genbank:NP_629044.1,GeneID:1100332;Name=NP_629044.1;Note=2SCK8.17c%2C hypothetical protein%2C len: 128 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCK8.17c;product=hypothetical protein;protein_id=NP_629044.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5325858	5325863	.	-	.	ID=id6233;gbkey=RBS
NC_003888.3	RefSeq	gene	5326034	5327032	.	+	.	ID=gene4944;Dbxref=GeneID:1100333;Name=2SCK8.18;gbkey=Gene;gene=2SCK8.18;gene_biotype=protein_coding;gene_synonym=2SCK8.18;locus_tag=SCO4892
NC_003888.3	RefSeq	CDS	5326034	5327032	.	+	0	ID=cds4844;Parent=gene4944;Dbxref=Genbank:NP_629045.1,GeneID:1100333;Name=NP_629045.1;Note=2SCK8.18%2C possible regulatory protein%2C len: 340 aa%3B similar to TR:Q9XBC8 (EMBL:AL078635) Amycolatopsis orientalis  transcriptional regulator CZA382.23c%2C 335 aa%3B fasta scores: opt: 222 z-score: 228.5 E(): 3.6e-05%3B 33.0%25 identity in 345 aa overlap;gbkey=CDS;gene=2SCK8.18;product=regulatory protein;protein_id=NP_629045.1;transl_table=11
NC_003888.3	RefSeq	gene	5327081	5328004	.	-	.	ID=gene4945;Dbxref=GeneID:1100334;Name=2SCK8.19c;gbkey=Gene;gene=2SCK8.19c;gene_biotype=protein_coding;gene_synonym=2SCK8.19c;locus_tag=SCO4893
NC_003888.3	RefSeq	CDS	5327081	5328004	.	-	0	ID=cds4845;Parent=gene4945;Dbxref=Genbank:NP_629046.1,GeneID:1100334;Name=NP_629046.1;Note=2SCK8.19c%2C possible transport integral membrane protein%2C len: 307 aa%3B similar to SW:MDCF_RHIME (EMBL:AF155772) Rhizobium meliloti malonate transporter MdcF%2C 320 aa%3B fasta scores: opt: 306 z-score: 339.0 E(): 2.6e-11%3B 27.4%25 identity in 299 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK8.19c;product=transport integral membrane protein;protein_id=NP_629046.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5328012	5328015	.	-	.	ID=id6234;gbkey=RBS
NC_003888.3	RefSeq	gene	5328163	5328414	.	-	.	ID=gene4946;Dbxref=GeneID:1100335;Name=2SCK8.20c;gbkey=Gene;gene=2SCK8.20c;gene_biotype=protein_coding;gene_synonym=2SCK8.20c;locus_tag=SCO4894
NC_003888.3	RefSeq	CDS	5328163	5328414	.	-	0	ID=cds4846;Parent=gene4946;Dbxref=Genbank:NP_629047.1,GeneID:1100335;Name=NP_629047.1;Note=2SCK8.20c%2C unknown%2C len: 83 aa;gbkey=CDS;gene=2SCK8.20c;product=hypothetical protein;protein_id=NP_629047.1;transl_table=11
NC_003888.3	RefSeq	gene	5328418	5329422	.	-	.	ID=gene4947;Dbxref=GeneID:1100336;Name=2SCK8.21c;gbkey=Gene;gene=2SCK8.21c;gene_biotype=protein_coding;gene_synonym=2SCK8.21c;locus_tag=SCO4895
NC_003888.3	RefSeq	CDS	5328418	5329422	.	-	0	ID=cds4847;Parent=gene4947;Dbxref=Genbank:NP_629048.1,GeneID:1100336;Name=NP_629048.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates;gbkey=CDS;gene=2SCK8.21c;product=RNA polymerase factor sigma-70;protein_id=NP_629048.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5329189	5329356	.	-	.	ID=id6235;Dbxref=GeneID:1100336;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 82.10%2C E-value 1.2e-20;gbkey=misc_feature;gene=2SCK8.21c
NC_003888.3	RefSeq	gene	5329530	5330840	.	-	.	ID=gene4948;Dbxref=GeneID:1100337;Name=2SCK8.22c;gbkey=Gene;gene=2SCK8.22c;gene_biotype=protein_coding;gene_synonym=2SCK8.22c;locus_tag=SCO4896
NC_003888.3	RefSeq	CDS	5329530	5330840	.	-	0	ID=cds4848;Parent=gene4948;Dbxref=Genbank:NP_629049.1,GeneID:1100337;Name=NP_629049.1;Note=2SCK8.22c%2C probable transport integral membrane protein%2C len: 436 aa%3B similar to TR:AAG56583 (EMBL:AE005383) Escherichia coli O157:H7 transport protein YnfM%2C 417 aa%3B fasta scores: opt: 971 z-score: 995.9 E(): 0%3B 38.8%25 identity in 418 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and matches to Prosite entries PS00216 Sugar transport proteins signature 1 and PS00017 ATP/GTP-binding site motif A (P-loop. Also contains possible hydrophobic membrane spanning regions);gbkey=CDS;gene=2SCK8.22c;product=transport integral membrane protein;protein_id=NP_629049.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5329566	5330699	.	-	.	ID=id6236;Dbxref=GeneID:1100337;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -82.80%2C E-value 0.00079;gbkey=misc_feature;gene=2SCK8.22c
NC_003888.3	RefSeq	sequence_feature	5329764	5329787	.	-	.	ID=id6237;Dbxref=GeneID:1100337;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCK8.22c
NC_003888.3	RefSeq	sequence_feature	5330505	5330555	.	-	.	ID=id6238;Dbxref=GeneID:1100337;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=2SCK8.22c
NC_003888.3	RefSeq	gene	5330904	5331857	.	+	.	ID=gene4949;Dbxref=GeneID:1100338;Name=2SCK8.23;gbkey=Gene;gene=2SCK8.23;gene_biotype=protein_coding;gene_synonym=2SCK8.23;locus_tag=SCO4897
NC_003888.3	RefSeq	CDS	5330904	5331857	.	+	0	ID=cds4849;Parent=gene4949;Dbxref=Genbank:NP_629050.1,GeneID:1100338;Name=NP_629050.1;Note=2SCK8.23%2C probable transcriptional regulator%2C len: 317 aa%3B similar to TR:Q9KIF0 (EMBL:AF235504) Streptomyces hygroscopicus var. ascomyceticus transcription regulator FkbR1%2C 297 aa%3B fasta scores: opt: 726 z-score: 799.4 E(): 0%3B 45.8%25 identity in 286 aa overlap. Contains possible helix-turn-helix motif at residues 38..59 (+4.22 SD);gbkey=CDS;gene=2SCK8.23;product=transcriptional regulator;protein_id=NP_629050.1;transl_table=11
NC_003888.3	RefSeq	gene	5331991	5332572	.	-	.	ID=gene4950;Dbxref=GeneID:1100339;Name=2SCK8.24c;gbkey=Gene;gene=2SCK8.24c;gene_biotype=protein_coding;gene_synonym=2SCK8.24c;locus_tag=SCO4898
NC_003888.3	RefSeq	CDS	5331991	5332572	.	-	0	ID=cds4850;Parent=gene4950;Dbxref=Genbank:NP_629051.1,GeneID:1100339;Name=NP_629051.1;Note=2SCK8.24c%2C probable tetR-family transcriptional regulator%2C len: 193 aa%3B similar to TR:Q9Z551 (EMBL:AL035212) Streptomyces coelicolor transcriptional regulator SC9B2.08c%2C 192 aa%3B fasta scores: opt: 235 z-score: 290.5 E(): 1.3e-08%3B 35.3%25 identity in 187 aa overlap and to SW:BETI_ECOLI (EMBL:X52905) Escherichia coli regulatory protein BetI%2C 195 aa%3B fasta scores: opt: 161 z-score: 202.7 E(): 0.001%3B 28.5%25 identity in 186 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 32..53 (+4.35 SD);gbkey=CDS;gene=2SCK8.24c;product=TetR family transcriptional regulator;protein_id=NP_629051.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5332387	5332527	.	-	.	ID=id6239;Dbxref=GeneID:1100339;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 43.30%2C E-value 1.5e-09;gbkey=misc_feature;gene=2SCK8.24c
NC_003888.3	RefSeq	ribosome_entry_site	5332670	5332674	.	+	.	ID=id6240;gbkey=RBS
NC_003888.3	RefSeq	gene	5332682	5333560	.	+	.	ID=gene4951;Dbxref=GeneID:1100340;Name=2SCK8.25;gbkey=Gene;gene=2SCK8.25;gene_biotype=protein_coding;gene_synonym=2SCK8.25;locus_tag=SCO4899
NC_003888.3	RefSeq	CDS	5332682	5333560	.	+	0	ID=cds4851;Parent=gene4951;Dbxref=Genbank:NP_629052.1,GeneID:1100340;Name=NP_629052.1;Note=2SCK8.25%2C hypothetical protein%2C len: 292 aa%3B similar to TR:Q9X7Q1 (EMBL:AL049587) Streptomyces coelicolor hypothetical alanine-rich protein SC5F2A.28c%2C 292 aa%3B fasta scores: opt: 716 z-score: 814.7 E(): 0%3B 44.9%25 identity in 274 aa overlap;gbkey=CDS;gene=2SCK8.25;product=hypothetical protein;protein_id=NP_629052.1;transl_table=11
NC_003888.3	RefSeq	gene	5333649	5334410	.	-	.	ID=gene4952;Dbxref=GeneID:1100341;Name=2SCK8.26c;gbkey=Gene;gene=2SCK8.26c;gene_biotype=protein_coding;gene_synonym=2SCK8.26c;locus_tag=SCO4900
NC_003888.3	RefSeq	CDS	5333649	5334410	.	-	0	ID=cds4852;Parent=gene4952;Dbxref=Genbank:NP_629053.1,GeneID:1100341;Name=NP_629053.1;Note=2SCK8.26c%2C hypothetical protein%2C len: 253 aa%3B similar to TR:Q9RD48 (EMBL:AL133424) Streptomyces coelicolor hypothetical 31.2 kDa protein SCF56.19%2C 297 aa%3B fasta scores: opt: 376 z-score: 449.5 E(): 1.8e-17%3B 36.4%25 identity in 253 aa overlap;gbkey=CDS;gene=2SCK8.26c;product=hypothetical protein;protein_id=NP_629053.1;transl_table=11
NC_003888.3	RefSeq	gene	5334546	5335736	.	+	.	ID=gene4953;Dbxref=GeneID:1100342;Name=2SCK8.27;gbkey=Gene;gene=2SCK8.27;gene_biotype=protein_coding;gene_synonym=2SCK8.27;locus_tag=SCO4901
NC_003888.3	RefSeq	CDS	5334546	5335736	.	+	0	ID=cds4853;Parent=gene4953;Dbxref=Genbank:NP_629054.1,GeneID:1100342;Name=NP_629054.1;Note=catalyzes the formation of inosine from adenosine;gbkey=CDS;gene=2SCK8.27;product=adenosine deaminase;protein_id=NP_629054.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5334606	5335646	.	+	.	ID=id6241;Dbxref=GeneID:1100342;Note=Pfam match to entry PF00962 A_deaminase%2C Adenosine/AMP deaminase%2C score 322.40%2C E-value 5.3e-93;gbkey=misc_feature;gene=2SCK8.27
NC_003888.3	RefSeq	sequence_feature	5335528	5335704	.	+	.	ID=id6242;Dbxref=GeneID:1100342;Note=low G+C content region (52.54%25);gbkey=misc_feature;gene=2SCK8.27
NC_003888.3	RefSeq	gene	5335877	5336245	.	+	.	ID=gene4954;Dbxref=GeneID:1100343;Name=2SCK8.28;gbkey=Gene;gene=2SCK8.28;gene_biotype=protein_coding;gene_synonym=2SCK8.28;locus_tag=SCO4902
NC_003888.3	RefSeq	CDS	5335877	5336245	.	+	0	ID=cds4854;Parent=gene4954;Dbxref=Genbank:NP_629055.1,GeneID:1100343;Name=NP_629055.1;Note=2SCK8.28%2C possible hypothetical protein%2C len: 122 aa. Contains possible cleavable N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCK8.28;product=hypothetical protein;protein_id=NP_629055.1;transl_table=11
NC_003888.3	RefSeq	gene	5336333	5336536	.	-	.	ID=gene4955;Dbxref=GeneID:1100344;Name=2SCK8.29c;gbkey=Gene;gene=2SCK8.29c;gene_biotype=protein_coding;gene_synonym=2SCK8.29c;locus_tag=SCO4903
NC_003888.3	RefSeq	CDS	5336333	5336536	.	-	0	ID=cds4855;Parent=gene4955;Dbxref=Genbank:NP_629056.1,GeneID:1100344;Name=NP_629056.1;Note=2SCK8.29c%2C possible membrane protein%2C len: 67aa%3B similar to TR:O34719 (EMBL:AF017113) Bacillus subtilis YvlC protein%2C 65 aa%3B fasta scores: opt: 107 z-score: 169.7 E(): 0.069%3B 33.9%25 identity in 62 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCK8.29c;product=hypothetical protein;protein_id=NP_629056.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5336542	5336547	.	-	.	ID=id6243;gbkey=RBS
NC_003888.3	RefSeq	gene	5336632	5337183	.	-	.	ID=gene4956;Dbxref=GeneID:1100345;Name=2SCK8.30c;gbkey=Gene;gene=2SCK8.30c;gene_biotype=protein_coding;gene_synonym=2SCK8.30c;locus_tag=SCO4904
NC_003888.3	RefSeq	CDS	5336632	5337183	.	-	0	ID=cds4856;Parent=gene4956;Dbxref=Genbank:NP_629057.1,GeneID:1100345;Name=NP_629057.1;Note=2SCK8.30c%2C possible integral membrane protein%2C len: 183 aa%3B similar to TR:CAC14351 (EMBL:AL445945) Streptomyces coelicolor  integral membrane protein 2SCF60.18%2C 179 aa%3B fasta scores: opt: 193 z-score: 230.8 E(): 2.7e-05%3B 32.0%25 identity in 153 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK8.30c;product=hypothetical protein;protein_id=NP_629057.1;transl_table=11
NC_003888.3	RefSeq	gene	5337310	5337921	.	-	.	ID=gene4957;Dbxref=GeneID:1100346;Name=2SCK8.31c;gbkey=Gene;gene=2SCK8.31c;gene_biotype=protein_coding;gene_synonym=2SCK8.31c;locus_tag=SCO4905
NC_003888.3	RefSeq	CDS	5337310	5337921	.	-	0	ID=cds4857;Parent=gene4957;Dbxref=Genbank:NP_629058.1,GeneID:1100346;Name=NP_629058.1;Note=2SCK8.31c%2C possible lipoprotein%2C len: 203 aa%3B similar to TR:Q9K453 (EMBL:AL359215) Streptomyces coelicolor hypothetical protein SC2H12.31%2C 211 aa%3B fasta scores: opt: 142 z-score: 175.4 E(): 0.033%3B 29.3%25 identity in 205 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SCK8.31c;product=lipoprotein;protein_id=NP_629058.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5337781	5340725	.	-	.	ID=id6244;Note=previously sequenced DNA fragment. EMBL:D10654 S.coelicolor afsQ1 and afsQ2 genes.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5337856	5337888	.	-	.	ID=id6245;Dbxref=GeneID:1100346;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SCK8.31c
NC_003888.3	RefSeq	gene	5337921	5339528	.	-	.	ID=gene4958;Dbxref=GeneID:1100347;Name=2SCK8.32c;gbkey=Gene;gene=2SCK8.32c;gene_biotype=protein_coding;gene_synonym=2SCK8.32c,afsQ2;locus_tag=SCO4906
NC_003888.3	RefSeq	CDS	5337921	5339528	.	-	0	ID=cds4858;Parent=gene4958;Dbxref=Genbank:NP_629059.1,GeneID:1100347;Name=NP_629059.1;Note=2SCK8.32c%2C afsQ2%2C sensor kinase%2C len: 535 aa%3B identical to previously sequenced SW:AFQ2_STRCO (EMBL:D10654) Streptomyces coelicolor sensor protein AfsQ2%2C 535 aa. Contains 3x Pfam matches to entries PF00672 DUF5%2C HAMP domain%2C PF00512 signal%2C Histidine kinase and PF02518 HATPase_c%2C Histidine kinase. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCK8.32c;product=sensor kinase;protein_id=NP_629059.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5337999	5338328	.	-	.	ID=id6246;Dbxref=GeneID:1100347;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase%2C score 148.20%2C E-value 1.4e-40;gbkey=misc_feature;gene=2SCK8.32c
NC_003888.3	RefSeq	sequence_feature	5338446	5338679	.	-	.	ID=id6247;Dbxref=GeneID:1100347;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 79.30%2C E-value 8.2e-20;gbkey=misc_feature;gene=2SCK8.32c
NC_003888.3	RefSeq	sequence_feature	5338710	5338919	.	-	.	ID=id6248;Dbxref=GeneID:1100347;Note=Pfam match to entry PF00672 DUF5%2C HAMP domain%2C score 72.00%2C E-value 1.2e-17;gbkey=misc_feature;gene=2SCK8.32c
NC_003888.3	RefSeq	gene	5339525	5340202	.	-	.	ID=gene4959;Dbxref=GeneID:1100348;Name=2SCK8.33c;gbkey=Gene;gene=2SCK8.33c;gene_biotype=protein_coding;gene_synonym=2SCK8.33c,afsQ1;locus_tag=SCO4907
NC_003888.3	RefSeq	CDS	5339525	5340202	.	-	0	ID=cds4859;Parent=gene4959;Dbxref=Genbank:NP_629060.1,GeneID:1100348;Name=NP_629060.1;Note=2SCK8.33c%2C afsQ1%2C transcriptional regulatory protein%2C len: 225 aa%3B identical to previously sequenced SW:AFQ1_STRCO (EMBL:D10654) Streptomyces coelicolor transcriptional regulatory protein AfsQ1%2C 225 aa and highly similar to TR:Q9K455 (EMBL:AL359215) Streptomyces coelicolor  two-component system response regulator SC2H12.29%2C 229 aa%3B fasta scores: opt: 920 z-score: 981.8 E(): 0%3B 61.0%25 identity in 228 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=2SCK8.33c;product=transcriptional regulator;protein_id=NP_629060.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5339549	5339767	.	-	.	ID=id6249;Dbxref=GeneID:1100348;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 119.10%2C E-value 2.4e-34;gbkey=misc_feature;gene=2SCK8.33c
NC_003888.3	RefSeq	sequence_feature	5339867	5340199	.	-	.	ID=id6250;Dbxref=GeneID:1100348;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 151.40%2C E-value 1.6e-41;gbkey=misc_feature;gene=2SCK8.33c
NC_003888.3	RefSeq	gene	5340552	5341142	.	+	.	ID=gene4960;Dbxref=GeneID:1100349;Name=2SCK8.34;gbkey=Gene;gene=2SCK8.34;gene_biotype=protein_coding;gene_synonym=2SCK8.34;locus_tag=SCO4908
NC_003888.3	RefSeq	CDS	5340552	5341142	.	+	0	ID=cds4860;Parent=gene4960;Dbxref=Genbank:NP_629061.1,GeneID:1100349;Name=NP_629061.1;Note=2SCK8.34%2C probable RNA polymerase sigma factor (fragment)%2C len: 196 aa%3B similar to SW:RPOE_STRCO (EMBL:L29636) Streptomyces coelicolor RNA polymerase sigma factor SigE%2C 176 aa%3B fasta scores: opt: 377 z-score: 396.4 E(): 1.7e-14%3B 44.6%25 identity in 148 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily) and possible helix-turn-helix motif at residues 148..169 (+3.34 SD);gbkey=CDS;gene=2SCK8.34;product=RNA polymerase sigma factor;protein_id=NP_629061.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5340672	5340839	.	+	.	ID=id6251;Dbxref=GeneID:1100349;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 16.10%2C E-value 0.0017;gbkey=misc_feature;gene=2SCK8.34
NC_003888.3	RefSeq	gene	5341385	5342161	.	-	.	ID=gene4961;Dbxref=GeneID:1100350;Name=SCK13.01c;gbkey=Gene;gene=SCK13.01c;gene_biotype=protein_coding;gene_synonym=SCK13.01c;locus_tag=SCO4909
NC_003888.3	RefSeq	CDS	5341385	5342161	.	-	0	ID=cds4861;Parent=gene4961;Dbxref=Genbank:NP_629062.1,GeneID:1100350;Name=NP_629062.1;Note=SCK13.01c%2C possible ATP-binding protein%2C len: 258 aa. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCK13.01c;product=ATP-binding protein;protein_id=NP_629062.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5341952	5341975	.	-	.	ID=id6252;Dbxref=GeneID:1100350;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCK13.01c
NC_003888.3	RefSeq	ribosome_entry_site	5342165	5342168	.	+	.	ID=id6253;gbkey=RBS
NC_003888.3	RefSeq	gene	5342180	5342584	.	+	.	ID=gene4962;Dbxref=GeneID:1100351;Name=SCK13.02;gbkey=Gene;gene=SCK13.02;gene_biotype=protein_coding;gene_synonym=SCK13.02;locus_tag=SCO4910
NC_003888.3	RefSeq	CDS	5342180	5342584	.	+	0	ID=cds4862;Parent=gene4962;Dbxref=Genbank:NP_629063.1,GeneID:1100351;Name=NP_629063.1;Note=SCK13.02%2C unknown%2C len: 134 aa;gbkey=CDS;gene=SCK13.02;product=hypothetical protein;protein_id=NP_629063.1;transl_table=11
NC_003888.3	RefSeq	gene	5342742	5344754	.	+	.	ID=gene4963;Dbxref=GeneID:1100352;Name=SCK13.03;gbkey=Gene;gene=SCK13.03;gene_biotype=protein_coding;gene_synonym=SCK13.03;locus_tag=SCO4911
NC_003888.3	RefSeq	CDS	5342742	5344754	.	+	0	ID=cds4863;Parent=gene4963;Dbxref=Genbank:NP_629064.1,GeneID:1100352;Name=NP_629064.1;Note=SCK13.03%2C possible bifunctional protein%2C len: 670 aa%3B N-terminal domain similar to N-terminal domain of TR:Q9S2A6 (EMBL:AL096849) Streptomyces coelicolor Ser/Thr protein kinase SCI11.13%2C 550 aa%3B fasta scores: opt: 895 z-score: 689.8 E(): 6.8e-31%3B 44.2%25 identity in 398 aa overlap and C-terminal domain similar to SW:GLNH_BACST (EMBL:M61017) Bacillus stearothermophilus glutamate-binding protein precursor GlnH%2C 262 aa%3B fasta score: opt: 50 z-score:0.0 E(): 0%3B 52.88%25 identity in 295 nt overlap. Contains Pfam matches to entries PF00069 pkinase%2C Eukaryotic protein kinase domain and PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3 and matches to Prosite entries PS00107 Protein kinases ATP-binding region signature%2C PS00108 Ser/Thr protein kinases active-site signature and PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature;gbkey=CDS;gene=SCK13.03;product=hypothetical protein;protein_id=NP_629064.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5342838	5343623	.	+	.	ID=id6254;Dbxref=GeneID:1100352;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 194.70%2C E-value 1.4e-54;gbkey=misc_feature;gene=SCK13.03
NC_003888.3	RefSeq	sequence_feature	5342856	5342927	.	+	.	ID=id6255;Dbxref=GeneID:1100352;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SCK13.03
NC_003888.3	RefSeq	sequence_feature	5343207	5343245	.	+	.	ID=id6256;Dbxref=GeneID:1100352;Note=PS00108 Ser/Thr protein kinases active-site signature;gbkey=misc_feature;gene=SCK13.03
NC_003888.3	RefSeq	sequence_feature	5343605	5343830	.	+	.	ID=id6257;Dbxref=GeneID:1100352;Note=high G+C content region (85.84%25);gbkey=misc_feature;gene=SCK13.03
NC_003888.3	RefSeq	sequence_feature	5343810	5344688	.	+	.	ID=id6258;Dbxref=GeneID:1100352;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 31.90%2C E-value 4.5e-08;gbkey=misc_feature;gene=SCK13.03
NC_003888.3	RefSeq	sequence_feature	5344071	5344112	.	+	.	ID=id6259;Dbxref=GeneID:1100352;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature;gbkey=misc_feature;gene=SCK13.03
NC_003888.3	RefSeq	gene	5344860	5345741	.	-	.	ID=gene4964;Dbxref=GeneID:1100353;Name=SCK13.04c;gbkey=Gene;gene=SCK13.04c;gene_biotype=protein_coding;gene_synonym=SCK13.04c;locus_tag=SCO4912
NC_003888.3	RefSeq	CDS	5344860	5345741	.	-	0	ID=cds4864;Parent=gene4964;Dbxref=Genbank:NP_629065.1,GeneID:1100353;Name=NP_629065.1;Note=SCK13.04c%2C possible aldehyde dehydrogenase%2C len: 293 aa%3B similar to C-terminal region of many eukaryotic aldehyde dehydrogenases%2C e.g. TR:Q9LLR2 (EMBL:AF162665) Oryza sativa aldehyde dehydrogenase AldH%2C 549 aa%3B fasta scores: opt: 445 z-score: 486.0 E(): 1.6e-19%3B 36.3%25 identity in 248 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family;gbkey=CDS;gene=SCK13.04c;product=aldehyde dehydrogenase;protein_id=NP_629065.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5344893	5345708	.	-	.	ID=id6260;Dbxref=GeneID:1100353;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score -197.20%2C E-value 1.4e-05;gbkey=misc_feature;gene=SCK13.04c
NC_003888.3	RefSeq	gene	5345752	5347194	.	-	.	ID=gene4965;Dbxref=GeneID:1100354;Name=SCK13.05c;gbkey=Gene;gene=SCK13.05c;gene_biotype=protein_coding;gene_synonym=SCK13.05c;locus_tag=SCO4913
NC_003888.3	RefSeq	CDS	5345752	5347194	.	-	0	ID=cds4865;Parent=gene4965;Dbxref=Genbank:NP_629066.1,GeneID:1100354;Name=NP_629066.1;Note=SCK13.05c%2C probable aldehyde dehydrogenase%2C len: aa%3B similar to SW:DHA5_YEAST (EMBL:X85987) Saccharomyces cerevisiae aldehyde dehydrogenase 2 (EC 1.2.1.5) Ald5%2C 506 aa%3B fasta scores: opt: 1336 z-score: 1519.8 E(): 0%3B 46.1%25 identity in 462 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family and match to Prosite entry PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=CDS;gene=SCK13.05c;product=aldehyde dehydrogenase;protein_id=NP_629066.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5345755	5347101	.	-	.	ID=id6261;Dbxref=GeneID:1100354;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 660.40%2C E-value 9.3e-195;gbkey=misc_feature;gene=SCK13.05c
NC_003888.3	RefSeq	sequence_feature	5346301	5346336	.	-	.	ID=id6262;Dbxref=GeneID:1100354;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SCK13.05c
NC_003888.3	RefSeq	gene	5347200	5348195	.	-	.	ID=gene4966;Dbxref=GeneID:1100355;Name=SCK13.06c;gbkey=Gene;gene=SCK13.06c;gene_biotype=protein_coding;gene_synonym=SCK13.06c;locus_tag=SCO4914
NC_003888.3	RefSeq	CDS	5347200	5348195	.	-	0	ID=cds4866;Parent=gene4966;Dbxref=Genbank:NP_629067.1,GeneID:1100355;Name=NP_629067.1;Note=SCK13.06c%2C probable deoxyribose-phosphate aldolase%2C len: 331 aa%3B similar to SW:DEOC_ECOLI (EMBL:X03224) Escherichia coli deoxyribose-phosphate aldolase (EC 4.1.2.4) DeoC%2C 259 aa%3B fasta scores: opt: 663 z-score: 743.7 E(): 0%3B 47.3%25 identity in 256 aa overlap. Contains Pfam match to entry PF01791 DeoC%2C Deoxyribose-phosphate aldolase;gbkey=CDS;gene=SCK13.06c;product=2-deoxyribose-5-phosphate aldolase;protein_id=NP_629067.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5347299	5347988	.	-	.	ID=id6263;Dbxref=GeneID:1100355;Note=Pfam match to entry PF01791 DeoC%2C Deoxyribose-phosphate aldolase%2C score 220.50%2C E-value 2.4e-62;gbkey=misc_feature;gene=SCK13.06c
NC_003888.3	RefSeq	gene	5348311	5349015	.	+	.	ID=gene4967;Dbxref=GeneID:1100356;Name=SCK13.07;gbkey=Gene;gene=SCK13.07;gene_biotype=protein_coding;gene_synonym=SCK13.07;locus_tag=SCO4915
NC_003888.3	RefSeq	CDS	5348311	5349015	.	+	0	ID=cds4867;Parent=gene4967;Dbxref=Genbank:NP_629068.1,GeneID:1100356;Name=NP_629068.1;Note=SCK13.07%2C possible integral membrane protein%2C len: 234 aa. Contains 3 possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK13.07;product=hypothetical protein;protein_id=NP_629068.1;transl_table=11
NC_003888.3	RefSeq	gene	5349119	5350768	.	-	.	ID=gene4968;Dbxref=GeneID:1100357;Name=SCK13.08c;gbkey=Gene;gene=SCK13.08c;gene_biotype=protein_coding;gene_synonym=SCK13.08c;locus_tag=SCO4916
NC_003888.3	RefSeq	CDS	5349119	5350768	.	-	0	ID=cds4868;Parent=gene4968;Dbxref=Genbank:NP_629069.1,GeneID:1100357;Name=NP_629069.1;Note=SCK13.08c%2C possible phosphomannomutase%2C len: 549 aa%3B similar to TR:O53360 (EMBL:AL021841) Mycobacterium tuberculosis  phosphomannomutase MTV016.07%2C 534 aa%3B fasta scores: opt: 1378 z-score: 1522.6 E(): 0%3B 46.7%25 identity in 529 aa overlap. Contains Pfam match to entry PF00408 PGM_PMM%2C Phosphoglucomutase/phosphomannomutase and match to Prosite entry PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature;gbkey=CDS;gene=SCK13.08c;product=phosphomannomutase;protein_id=NP_629069.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5349203	5350630	.	-	.	ID=id6264;Dbxref=GeneID:1100357;Note=Pfam match to entry PF00408 PGM_PMM%2C Phosphoglucomutase/phosphomannomutase%2C score 44.00%2C E-value 1.6e-12;gbkey=misc_feature;gene=SCK13.08c
NC_003888.3	RefSeq	sequence_feature	5350295	5350339	.	-	.	ID=id6265;Dbxref=GeneID:1100357;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature;gbkey=misc_feature;gene=SCK13.08c
NC_003888.3	RefSeq	ribosome_entry_site	5350778	5350781	.	-	.	ID=id6266;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	5350867	5350979	.	-	.	ID=id6267;Note=possible stem loop. Score 57: 23/26 (88%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5351124	5351948	.	-	.	ID=gene4969;Dbxref=GeneID:1100358;Name=SCK13.09c;gbkey=Gene;gene=SCK13.09c;gene_biotype=protein_coding;gene_synonym=SCK13.09c;locus_tag=SCO4917
NC_003888.3	RefSeq	CDS	5351124	5351948	.	-	0	ID=cds4869;Parent=gene4969;Dbxref=Genbank:NP_629070.1,GeneID:1100358;Name=NP_629070.1;Note=catalyzes the formation of a purine and ribose phosphate from a purine nucleoside%3B in E. coli this enzyme functions in xanthosine degradation;gbkey=CDS;gene=SCK13.09c;product=purine nucleoside phosphorylase;protein_id=NP_629070.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5351238	5351843	.	-	.	ID=id6268;Dbxref=GeneID:1100358;Note=Pfam match to entry PF00896 Mtap_PNP%2C phosphorylases family 2%2C score 219.30%2C E-value 5.7e-62;gbkey=misc_feature;gene=SCK13.09c
NC_003888.3	RefSeq	gene	5352042	5352479	.	-	.	ID=gene4970;Dbxref=GeneID:1100359;Name=SCK13.10c;gbkey=Gene;gene=SCK13.10c;gene_biotype=protein_coding;gene_synonym=SCK13.10c;locus_tag=SCO4918
NC_003888.3	RefSeq	CDS	5352042	5352479	.	-	0	ID=cds4870;Parent=gene4970;Dbxref=Genbank:NP_629071.1,GeneID:1100359;Name=NP_629071.1;Note=SCK13.10c%2C conserved hypothetical protein%2C len: 145 aa%3B similar to TR:O53356 (EMBL:AL021841) Mycobacterium tuberculosis hypothetical 17.5 kDa protein MTV016.03%2C 159 aa%3B fasta scores: opt: 621 z-score: 794.6 E(): 0%3B 60.4%25 identity in 149 aa overlap;gbkey=CDS;gene=SCK13.10c;product=hypothetical protein;protein_id=NP_629071.1;transl_table=11
NC_003888.3	RefSeq	gene	5352587	5354014	.	+	.	ID=gene4971;Dbxref=GeneID:1100360;Name=SCK13.11;gbkey=Gene;gene=SCK13.11;gene_biotype=protein_coding;gene_synonym=SCK13.11;locus_tag=SCO4919
NC_003888.3	RefSeq	CDS	5352587	5354014	.	+	0	ID=cds4871;Parent=gene4971;Dbxref=Genbank:NP_629072.1,GeneID:1100360;Name=NP_629072.1;Note=catalyzes the reduction of nonspecific electron acceptors such as 2%2C6-dimethyl-1%2C4-benzoquinone and 5-hydroxy-1%2C4-naphthaquinone%3B does not have lipoamide dehydrogenase activity;gbkey=CDS;gene=SCK13.11;product=flavoprotein disulfide reductase;protein_id=NP_629072.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5352587	5353546	.	+	.	ID=id6269;Dbxref=GeneID:1100360;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 211.60%2C E-value 1e-61;gbkey=misc_feature;gene=SCK13.11
NC_003888.3	RefSeq	sequence_feature	5354208	5354312	.	+	.	ID=id6270;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5354229	5355182	.	+	.	ID=gene4972;Dbxref=GeneID:1100361;Name=SCK13.12;gbkey=Gene;gene=SCK13.12;gene_biotype=protein_coding;gene_synonym=SCK13.12;locus_tag=SCO4920
NC_003888.3	RefSeq	CDS	5354229	5355182	.	+	0	ID=cds4872;Parent=gene4972;Dbxref=Genbank:NP_629073.1,GeneID:1100361;Name=NP_629073.1;Note=SCK13.12%2C probable deoR-family transcriptional regulator%2C len: 317 aa%3B similar to SW:GATR_ECOLI (EMBL:AE000298) Escherichia coli galactitol utilization operon repressor GatR%2C 259 aa%3B fasta scores: opt: 442 z-score: 423.7 E(): 4.6e-16%3B 34.6%25 identity in 237 aa overlap. Contains Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family and match to Prosite entry PS00894 Bacterial regulatory proteins%2C deoR family signature. Also contains possible helix-turn-helix motif at residues 8..29 (+4.06 SD);gbkey=CDS;gene=SCK13.12;product=DeoR family transcriptional regulator;protein_id=NP_629073.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5354229	5354888	.	+	.	ID=id6271;Dbxref=GeneID:1100361;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 235.90%2C E-value 5.7e-67;gbkey=misc_feature;gene=SCK13.12
NC_003888.3	RefSeq	stem_loop	5355215	5355260	.	-	.	ID=id6272;Note=possible stem loop. Score 57: 19/19 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5355283	5357055	.	-	.	ID=gene4973;Dbxref=GeneID:1100362;Name=accA2;gbkey=Gene;gene=accA2;gene_biotype=protein_coding;gene_synonym=accA2,SCK13.13c;locus_tag=SCO4921
NC_003888.3	RefSeq	CDS	5355283	5357055	.	-	0	ID=cds4873;Parent=gene4973;Dbxref=Genbank:NP_629074.1,GeneID:1100362;Name=NP_629074.1;Note=SCK13.13c%2C accA2%2C acyl-CoA carboxylase complex A subunit%2C len: 590 aa%3B identical to previously sequenced TR:Q9X4K6 (EMBL:AF113603) Streptomyces coelicolor acyl-CoA carboxylase complex A subunit AccA2%2C 590 aa. Contains Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase) and PF00364 biotin_lipoyl%2C Biotin-requiring enzymes and match to Prosite entry PS00867 Carbamoyl-phosphate synthase subdomain signature 2 and PS00188 Biotin-requiring enzymes attachment site;gbkey=CDS;gene=accA2;product=acyl-CoA carboxylase complex A subunit;protein_id=NP_629074.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5355283	5357055	.	-	.	ID=id6273;Dbxref=GeneID:1100362;Note=previously sequenced DNA fragment. EMBL:AF113604 Streptomyces coelicolor acyl-CoA carboxylase complex A subunit (accA2) gene%2C complete cds.;gbkey=misc_feature;gene=accA2
NC_003888.3	RefSeq	sequence_feature	5355292	5355495	.	-	.	ID=id6274;Dbxref=GeneID:1100362;Note=Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C score 76.60%2C E-value 5e-19;gbkey=misc_feature;gene=accA2
NC_003888.3	RefSeq	sequence_feature	5355370	5355423	.	-	.	ID=id6275;Dbxref=GeneID:1100362;Note=PS00188 Biotin-requiring enzymes attachment site;gbkey=misc_feature;gene=accA2
NC_003888.3	RefSeq	sequence_feature	5355952	5357049	.	-	.	ID=id6276;Dbxref=GeneID:1100362;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 585.30%2C E-value 3.8e-172;gbkey=misc_feature;gene=accA2
NC_003888.3	RefSeq	sequence_feature	5356180	5356203	.	-	.	ID=id6277;Dbxref=GeneID:1100362;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=accA2
NC_003888.3	RefSeq	ribosome_entry_site	5357064	5357067	.	-	.	ID=id6278;gbkey=RBS
NC_003888.3	RefSeq	gene	5357430	5357912	.	+	.	ID=gene4974;Dbxref=GeneID:1100363;Name=SCK13.14;gbkey=Gene;gene=SCK13.14;gene_biotype=protein_coding;gene_synonym=SCK13.14;locus_tag=SCO4922
NC_003888.3	RefSeq	CDS	5357430	5357912	.	+	0	ID=cds4874;Parent=gene4974;Dbxref=Genbank:NP_629075.1,GeneID:1100363;Name=NP_629075.1;Note=SCK13.14%2C possible integral membrane protein%2C len: 160 aa. Contains 4 possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK13.14;product=hypothetical protein;protein_id=NP_629075.1;transl_table=11
NC_003888.3	RefSeq	gene	5357881	5358501	.	-	.	ID=gene4975;Dbxref=GeneID:1100364;Name=SCK13.15c;gbkey=Gene;gene=SCK13.15c;gene_biotype=protein_coding;gene_synonym=SCK13.15c;locus_tag=SCO4923
NC_003888.3	RefSeq	CDS	5357881	5358501	.	-	0	ID=cds4875;Parent=gene4975;Dbxref=Genbank:NP_629076.1,GeneID:1100364;Name=NP_629076.1;Note=SCK13.15c%2C conserved hypothetical protein%2C len: 206 aa%3B similar to TR:P74331 (EMBL:D90914) Synechocystis sp. hypothetical protein Maf%2C 195 aa%3B fasta scores: opt: 565 z-score: 677.1 E(): 3.5e-30%3B 49.2%25 identity in 193 aa overlap;gbkey=CDS;gene=SCK13.15c;product=hypothetical protein;protein_id=NP_629076.1;transl_table=11
NC_003888.3	RefSeq	gene	5358534	5358662	.	-	.	ID=gene4976;Dbxref=GeneID:1100365;Name=SCK13.16c;gbkey=Gene;gene=SCK13.16c;gene_biotype=protein_coding;gene_synonym=SCK13.16c;locus_tag=SCO4924
NC_003888.3	RefSeq	CDS	5358534	5358662	.	-	0	ID=cds4876;Parent=gene4976;Dbxref=Genbank:NP_629077.1,GeneID:1100365;Name=NP_629077.1;Note=SCK13.16c%2C possible membrane protein%2C len: 42 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCK13.16c;product=hypothetical protein;protein_id=NP_629077.1;transl_table=11
NC_003888.3	RefSeq	gene	5358799	5359008	.	-	.	ID=gene4977;Dbxref=GeneID:1100366;Name=SCK13.17c;gbkey=Gene;gene=SCK13.17c;gene_biotype=protein_coding;gene_synonym=SCK13.17c;locus_tag=SCO4925
NC_003888.3	RefSeq	CDS	5358799	5359008	.	-	0	ID=cds4877;Parent=gene4977;Dbxref=Genbank:NP_629078.1,GeneID:1100366;Name=NP_629078.1;Note=SCK13.17c%2C unknown%2C len: 69 aa;gbkey=CDS;gene=SCK13.17c;product=hypothetical protein;protein_id=NP_629078.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5359014	5359019	.	-	.	ID=id6279;gbkey=RBS
NC_003888.3	RefSeq	gene	5359018	5360610	.	-	.	ID=gene4978;Dbxref=GeneID:1100367;Name=pccB;gbkey=Gene;gene=pccB;gene_biotype=protein_coding;gene_synonym=pccB,SCK13.18c;locus_tag=SCO4926
NC_003888.3	RefSeq	CDS	5359018	5360610	.	-	0	ID=cds4878;Parent=gene4978;Dbxref=Genbank:NP_629079.1,GeneID:1100367;Name=NP_629079.1;Note=SCK13.18c%2C pccB%2C propionyl-CoA carboxylase complex B subunit%2C len: 530 aa%3B identical to previously sequenced TR:Q9X4K7 (EMBL:AF113605) Streptomyces coelicolor propionyl-CoA carboxylase complex B subunit PccB%2C 530 aa and similar to TR:O86517 (EMBL:AL031124) Streptomyces coelicolor carboxyl transferase SC1C2.16%2C 527 aa%3B fasta scores: opt: 1958 z-score: 2071.4 E(): 0%3B 57.4%25 identity in 526 aa overlap. Contains Pfam match to entry PF01039 Carboxyl_trans%2C Carboxyl transferase domain;gbkey=CDS;gene=pccB;product=propionyl-CoA carboxylase complex B subunit;protein_id=NP_629079.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5359018	5360610	.	-	.	ID=id6280;Dbxref=GeneID:1100367;Note=previously sequenced DNA fragment. EMBL:AF113605 Streptomyces coelicolor propionyl-CoA carboxylase complex B subunit (pccB) gene%2C complete cds.;gbkey=misc_feature;gene=pccB
NC_003888.3	RefSeq	sequence_feature	5359027	5360538	.	-	.	ID=id6281;Dbxref=GeneID:1100367;Note=Pfam match to entry PF01039 Carboxyl_trans%2C Carboxyl transferase domain%2C score 993.90%2C E-value 3.9e-295;gbkey=misc_feature;gene=pccB
NC_003888.3	RefSeq	ribosome_entry_site	5360621	5360624	.	-	.	ID=id6282;gbkey=RBS
NC_003888.3	RefSeq	gene	5360721	5361596	.	+	.	ID=gene4979;Dbxref=GeneID:1100368;Name=SCK13.19;gbkey=Gene;gene=SCK13.19;gene_biotype=protein_coding;gene_synonym=SCK13.19;locus_tag=SCO4927
NC_003888.3	RefSeq	CDS	5360721	5361596	.	+	0	ID=cds4879;Parent=gene4979;Dbxref=Genbank:NP_629080.1,GeneID:1100368;Name=NP_629080.1;Note=SCK13.19%2C probable ligase%2C len: 291 aa%3B similar to C-terminal domain of SW:BIRA_ECOLI (EMBL:M10123) Escherichia coli BirA bifunctional protein [includes: biotin operon repressor biotin--[acetyl-CoA-carboxylase] synthetase (EC 6.3.4.1) (biotin--protein ligase)]%2C 321 aa%3B fasta scores: opt: 340 z-score: 382.0 E(): 9.7e-14%3B 32.7%25 identity in 260 aa overlap. Contains Pfam match to entry PF01317 BPL%2C Biotin protein ligase catalytic domain and PF02237 BPL_C%2C Biotin protein ligase C terminal domain;gbkey=CDS;gene=SCK13.19;product=ligase;protein_id=NP_629080.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5360853	5361353	.	+	.	ID=id6283;Dbxref=GeneID:1100368;Note=Pfam match to entry PF01317 BPL%2C Biotin protein ligase catalytic domain%2C score 130.90%2C E-value 2.3e-35;gbkey=misc_feature;gene=SCK13.19
NC_003888.3	RefSeq	sequence_feature	5361438	5361584	.	+	.	ID=id6284;Dbxref=GeneID:1100368;Note=Pfam match to entry PF02237 BPL_C%2C Biotin protein ligase C terminal domain%2C score 31.70%2C E-value 1.7e-05;gbkey=misc_feature;gene=SCK13.19
NC_003888.3	RefSeq	sequence_feature	5361693	5363016	.	+	.	ID=id6285;Note=previously sequenced DNA fragment. EMBL:X74768 S.coelicolor cya gene for adenylate cyclase;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5361712	5362857	.	+	.	ID=gene4980;Dbxref=GeneID:1100369;Name=cya;gbkey=Gene;gene=cya;gene_biotype=protein_coding;gene_synonym=cya,SCK13.20;locus_tag=SCO4928
NC_003888.3	RefSeq	CDS	5361712	5362857	.	+	0	ID=cds4880;Parent=gene4980;Dbxref=Genbank:NP_629081.1,GeneID:1100369;Name=NP_629081.1;Note=SCK13.20%2C cya%2C adenylate cyclase%2C len: 381 aa%3B identical to previously sequenced SW:CYAA_STRCO (EMBL:X74768) Streptomyces coelicolor adenylate cyclase (EC 4.6.1.1) Cya%2C 381 aa. Contains Pfam match to entry PF00211 guanylate_cyc%2C Adenylate and Guanylate cyclase catalytic domain;gbkey=CDS;gene=cya;product=adenylate cyclase;protein_id=NP_629081.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5362255	5362830	.	+	.	ID=id6286;Dbxref=GeneID:1100369;Note=Pfam match to entry PF00211 guanylate_cyc%2C Adenylate and Guanylate cyclase catalytic domain%2C score 178.80%2C E-value 9.1e-50;gbkey=misc_feature;gene=cya
NC_003888.3	RefSeq	sequence_feature	5362681	5362725	.	+	.	ID=id6287;Dbxref=GeneID:1100369;Note=high content in alanine amino acid residues. Also high G+C content (88.88%25);gbkey=misc_feature;gene=cya
NC_003888.3	RefSeq	gene	5362921	5363586	.	-	.	ID=gene4981;Dbxref=GeneID:1100370;Name=SCK13.21c;gbkey=Gene;gene=SCK13.21c;gene_biotype=protein_coding;gene_synonym=SCK13.21c;locus_tag=SCO4929
NC_003888.3	RefSeq	CDS	5362921	5363586	.	-	0	ID=cds4881;Parent=gene4981;Dbxref=Genbank:NP_629082.1,GeneID:1100370;Name=NP_629082.1;Note=SCK13.21c%2C possible membrane protein%2C len: 221 aa. High content in proline amino acid residues and in G+C (81.74%25). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCK13.21c;product=hypothetical protein;protein_id=NP_629082.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5362981	5363055	.	-	.	ID=id6288;Dbxref=GeneID:1100370;Note=High content on proline amino acid residues;gbkey=misc_feature;gene=SCK13.21c
NC_003888.3	RefSeq	ribosome_entry_site	5363591	5363595	.	-	.	ID=id6289;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5363787	5363791	.	+	.	ID=id6290;gbkey=RBS
NC_003888.3	RefSeq	gene	5363797	5364597	.	+	.	ID=gene4982;Dbxref=GeneID:1100371;Name=SCK13.22;gbkey=Gene;gene=SCK13.22;gene_biotype=protein_coding;gene_synonym=SCK13.22;locus_tag=SCO4930
NC_003888.3	RefSeq	CDS	5363797	5364597	.	+	0	ID=cds4882;Parent=gene4982;Dbxref=Genbank:NP_629083.1,GeneID:1100371;Name=NP_629083.1;Note=SCK13.22%2C probable enoyl-CoA hydratase%2C len: 266 aa%3B similar to SW:PAAF_ECOLI (EMBL:AE000236) Escherichia coli probable enoyl-CoA hydratase PaaF (EC 4.2.1.17)%2C 255 aa%3B fasta scores: opt: 562 z-score: 664.6 E(): 1.8e-29%3B 40.2%25 identity in 259 aa overlap. Contains Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family and match to Prosite entry PS00166 Enoyl-CoA hydratase/isomerase signature;gbkey=CDS;gene=SCK13.22;product=enoyl-CoA hydratase;protein_id=NP_629083.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5363857	5364366	.	+	.	ID=id6291;Dbxref=GeneID:1100371;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 213.50%2C E-value 3.1e-60;gbkey=misc_feature;gene=SCK13.22
NC_003888.3	RefSeq	sequence_feature	5364115	5364177	.	+	.	ID=id6292;Dbxref=GeneID:1100371;Note=PS00166 Enoyl-CoA hydratase/isomerase signature;gbkey=misc_feature;gene=SCK13.22
NC_003888.3	RefSeq	gene	5364745	5365845	.	+	.	ID=gene4983;Dbxref=GeneID:1100372;Name=SCK13.23;gbkey=Gene;gene=SCK13.23;gene_biotype=protein_coding;gene_synonym=SCK13.23;locus_tag=SCO4931
NC_003888.3	RefSeq	CDS	5364745	5365845	.	+	0	ID=cds4883;Parent=gene4983;Dbxref=Genbank:NP_629084.1,GeneID:1100372;Name=NP_629084.1;Note=SCK13.23%2C possible membrane protein%2C len: 366 aa%3B highly similar to C-terminal region of SW:YHUH_STRGR (EMBL:M77841) Streptomyces griseus hypothetical protein in HutH 5' region (fragment)%2C 241 aa%3B fasta scores: opt: 1253 z-score: 1461.2 E(): 0%3B 81.0%25 identity in 242 aa overlap. Contains Pfam match to entry PF00990 DUF9%2C Domain of unknown function DUF9. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCK13.23;product=hypothetical protein;protein_id=NP_629084.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5365243	5365731	.	+	.	ID=id6293;Dbxref=GeneID:1100372;Note=Pfam match to entry PF00990 DUF9%2C Domain of unknown function DUF9%2C score 120.40%2C E-value 3.3e-32;gbkey=misc_feature;gene=SCK13.23
NC_003888.3	RefSeq	gene	5365963	5367501	.	+	.	ID=gene4984;Dbxref=GeneID:1100373;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;gene_synonym=SCK13.24;locus_tag=SCO4932
NC_003888.3	RefSeq	CDS	5365963	5367501	.	+	0	ID=cds4884;Parent=gene4984;Dbxref=Genbank:NP_629085.1,GeneID:1100373;Name=NP_629085.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;gene=hutH;product=histidine ammonia-lyase;protein_id=NP_629085.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5365963	5367450	.	+	.	ID=id6294;Dbxref=GeneID:1100373;Note=Pfam match to entry PF00221 PAL%2C Phenylalanine and histidine ammonia-lyases%2C score 852.90%2C E-value 9.4e-265;gbkey=misc_feature;gene=hutH
NC_003888.3	RefSeq	sequence_feature	5366119	5366196	.	+	.	ID=id6295;Dbxref=GeneID:1100373;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=hutH
NC_003888.3	RefSeq	sequence_feature	5366377	5366424	.	+	.	ID=id6296;Dbxref=GeneID:1100373;Note=PS00488 Phenylalanine and histidine ammonia-lyases signature;gbkey=misc_feature;gene=hutH
NC_003888.3	RefSeq	stem_loop	5367509	5367566	.	+	.	ID=id6297;Note=possible stem loop. Score 65: 27/28 (96%25) matches%2C 1 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5367731	5368444	.	+	.	ID=gene4985;Dbxref=GeneID:1100374;Name=SCK13.25;gbkey=Gene;gene=SCK13.25;gene_biotype=protein_coding;gene_synonym=SCK13.25;locus_tag=SCO4933
NC_003888.3	RefSeq	CDS	5367731	5368444	.	+	0	ID=cds4885;Parent=gene4985;Dbxref=Genbank:NP_629086.1,GeneID:1100374;Name=NP_629086.1;Note=SCK13.25%2C unknown%2C len: 237 aa;gbkey=CDS;gene=SCK13.25;product=hypothetical protein;protein_id=NP_629086.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5367975	5368169	.	+	.	ID=id6298;Dbxref=GeneID:1100374;Note=Low content in G+C (58.97%25) region;gbkey=misc_feature;gene=SCK13.25
NC_003888.3	RefSeq	ribosome_entry_site	5368664	5368667	.	+	.	ID=id6299;gbkey=RBS
NC_003888.3	RefSeq	gene	5368677	5369921	.	+	.	ID=gene4986;Dbxref=GeneID:1100375;Name=SCK13.26;gbkey=Gene;gene=SCK13.26;gene_biotype=protein_coding;gene_synonym=SCK13.26;locus_tag=SCO4934
NC_003888.3	RefSeq	CDS	5368677	5369921	.	+	0	ID=cds4886;Parent=gene4986;Dbxref=Genbank:NP_629087.1,GeneID:1100375;Name=NP_629087.1;Note=SCK13.26%2C possible lipoprotein%2C len: 414 aa%3B similar to TR:Q9KYV1 (EMBL:AL355832) Streptomyces coelicolor lipoprotein SCE22.11%2C 407 aa%3B fasta scores: opt: 1603 z-score: 1740.6 E(): 0%3B 60.5%25 identity in 415 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SCK13.26;product=lipoprotein;protein_id=NP_629087.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5368722	5368754	.	+	.	ID=id6300;Dbxref=GeneID:1100375;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCK13.26
NC_003888.3	RefSeq	gene	5370069	5371559	.	+	.	ID=gene4987;Dbxref=GeneID:1100376;Name=SCK13.27;gbkey=Gene;gene=SCK13.27;gene_biotype=protein_coding;gene_synonym=SCK13.27;locus_tag=SCO4935
NC_003888.3	RefSeq	CDS	5370069	5371559	.	+	0	ID=cds4887;Parent=gene4987;Dbxref=Genbank:NP_629088.1,GeneID:1100376;Name=NP_629088.1;Note=SCK13.27%2C possible integral membrane protein%2C len: 496 aa%3B C-terminal region similar to C-terminal region of similar to TR:Q9UX75 (EMBL:Y18930) Sulfolobus solfataricus hypothetical 43.0 kDa protein ORF-C10_044%2C 418 aa%3B fasta scores: opt: 332 z-score: 303.7 E(): 2.2e-09%3B 27.1%25 identity in 325 aa overlap. Contains 4 possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK13.27;product=hypothetical protein;protein_id=NP_629088.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5371311	5371388	.	+	.	ID=id6301;Dbxref=GeneID:1100376;Note=glycine amino acids residues rich region. Also high in G+C content (88.46%25);gbkey=misc_feature;gene=SCK13.27
NC_003888.3	RefSeq	ribosome_entry_site	5371581	5371585	.	+	.	ID=id6302;gbkey=RBS
NC_003888.3	RefSeq	gene	5371593	5372276	.	+	.	ID=gene4988;Dbxref=GeneID:1100377;Name=SCK13.28;gbkey=Gene;gene=SCK13.28;gene_biotype=protein_coding;gene_synonym=SCK13.28;locus_tag=SCO4936
NC_003888.3	RefSeq	CDS	5371593	5372276	.	+	0	ID=cds4888;Parent=gene4988;Dbxref=Genbank:NP_629089.1,GeneID:1100377;Name=NP_629089.1;Note=SCK13.28%2C possible ABC transporter ATP-binding protein%2C len: 227 aa%3B similar to TR:Q9KRR8 (EMBL:AE004234) Vibrio cholerae ABC transporter%2C ATP-binding protein VC1568%2C 233 aa%3B fasta scores: opt: 746 z-score: 833.1 E(): 0%3B 51.1%25 identity in 223 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCK13.28;product=ABC transporter ATP-binding protein;protein_id=NP_629089.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5371683	5372243	.	+	.	ID=id6303;Dbxref=GeneID:1100377;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 194.50%2C E-value 1.6e-54;gbkey=misc_feature;gene=SCK13.28
NC_003888.3	RefSeq	sequence_feature	5371704	5371727	.	+	.	ID=id6304;Dbxref=GeneID:1100377;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCK13.28
NC_003888.3	RefSeq	sequence_feature	5372016	5372060	.	+	.	ID=id6305;Dbxref=GeneID:1100377;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCK13.28
NC_003888.3	RefSeq	gene	5372301	5372819	.	-	.	ID=gene4989;Dbxref=GeneID:1100378;Name=SCK13.29c;gbkey=Gene;gene=SCK13.29c;gene_biotype=protein_coding;gene_synonym=SCK13.29c;locus_tag=SCO4937
NC_003888.3	RefSeq	CDS	5372301	5372819	.	-	0	ID=cds4889;Parent=gene4989;Dbxref=Genbank:NP_629090.1,GeneID:1100378;Name=NP_629090.1;Note=SCK13.29c%2C hypothetical protein%2C len: 172 aa%3B similar to TR:CAC04235 (EMBL:AL391515) Streptomyces coelicolor conserved hypothetical protein SC4B10.30c%2C 156 aa%3B fasta scores: opt: 215 z-score: 274.7 E(): 9.2e-08%3B 30.9%25 identity in 139 aa overlap;gbkey=CDS;gene=SCK13.29c;product=hypothetical protein;protein_id=NP_629090.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5372790	5372816	.	-	.	ID=id6306;Dbxref=GeneID:1100378;Note=high concentration in threonine amino acid residues;gbkey=misc_feature;gene=SCK13.29c
NC_003888.3	RefSeq	ribosome_entry_site	5372830	5372835	.	-	.	ID=id6307;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5373001	5373006	.	+	.	ID=id6308;gbkey=RBS
NC_003888.3	RefSeq	gene	5373018	5373932	.	+	.	ID=gene4990;Dbxref=GeneID:1100379;Name=SCK13.30;gbkey=Gene;gene=SCK13.30;gene_biotype=protein_coding;gene_synonym=SCK13.30;locus_tag=SCO4938
NC_003888.3	RefSeq	CDS	5373018	5373932	.	+	0	ID=cds4890;Parent=gene4990;Dbxref=Genbank:NP_629091.1,GeneID:1100379;Name=NP_629091.1;Note=SCK13.30%2C possible ECF-sigma factor%2C len: 304 aa%3B similar to TR:Q9RJS2 (EMBL:AL132707) Streptomyces coelicolor RNA polymerase sigma factor SCF51.13c%2C 298 aa%3B fasta scores: opt: 1110 z-score: 1299.2 E(): 0%3B 58.4%25 identity in 296 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily) and possible helix-turn-helix motif at residues 144..165 (+2.59 SD);gbkey=CDS;gene=SCK13.30;product=ECF-sigma factor;protein_id=NP_629091.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5373066	5373236	.	+	.	ID=id6309;Dbxref=GeneID:1100379;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 11.30%2C E-value 0.006;gbkey=misc_feature;gene=SCK13.30
NC_003888.3	RefSeq	gene	5373976	5374758	.	-	.	ID=gene4991;Dbxref=GeneID:1100380;Name=SCK13.31c;gbkey=Gene;gene=SCK13.31c;gene_biotype=protein_coding;gene_synonym=SCK13.31c;locus_tag=SCO4939
NC_003888.3	RefSeq	CDS	5373976	5374758	.	-	0	ID=cds4891;Parent=gene4991;Dbxref=Genbank:NP_629092.1,GeneID:1100380;Name=NP_629092.1;Note=SCK13.31c%2C unknown%2C len: 260 aa;gbkey=CDS;gene=SCK13.31c;product=hypothetical protein;protein_id=NP_629092.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5374765	5374771	.	-	.	ID=id6310;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	5374804	5374849	.	-	.	ID=id6311;Note=possible stem loop. Score 60: 20/20 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5374860	5375462	.	+	.	ID=gene4992;Dbxref=GeneID:1100381;Name=SCK13.32;gbkey=Gene;gene=SCK13.32;gene_biotype=protein_coding;gene_synonym=SCK13.32;locus_tag=SCO4940
NC_003888.3	RefSeq	CDS	5374860	5375462	.	+	0	ID=cds4892;Parent=gene4992;Dbxref=Genbank:NP_733652.1,GeneID:1100381;Name=NP_733652.1;Note=SCK13.32%2C possible tetR-family transcriptional regulator%2C len: 200 aa%3B similar to TR:Q9KZX2 (EMBL:AL353815) Streptomyces coelicolor transcriptional regulator SCD6.32c%2C 200 aa%3B fasta scores: opt: 183 z-score: 230.1 E(): 2.8e-05%3B 28.3%25 identity in 159 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 33..54 (+4.53 SD);gbkey=CDS;gene=SCK13.32;product=TetR family transcriptional regulator;protein_id=NP_733652.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5374908	5375036	.	+	.	ID=id6312;Dbxref=GeneID:1100381;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 34.50%2C E-value 3.1e-07;gbkey=misc_feature;gene=SCK13.32
NC_003888.3	RefSeq	gene	5375466	5375783	.	-	.	ID=gene4993;Dbxref=GeneID:1100382;Name=2SCK31.01c;gbkey=Gene;gene=2SCK31.01c;gene_biotype=protein_coding;gene_synonym=2SCK31.01c;locus_tag=SCO4941
NC_003888.3	RefSeq	CDS	5375466	5375783	.	-	0	ID=cds4893;Parent=gene4993;Dbxref=Genbank:NP_629093.1,GeneID:1100382;Name=NP_629093.1;Note=2SCK31.01c%2C hypothetical protein%2C len: 105 aa%3B similar to TR:Q9KZT7 (EMBL:AL353832) Streptomyces coelicolor hypothetical 20.2 kDa protein (fragment) SCE6.01c%2C 183 aa%3B fasta scores: opt: 191 z-score: 223.2 E(): 6.8e-05%3B 41.5%25 identity in 82 aa overlap;gbkey=CDS;gene=2SCK31.01c;product=hypothetical protein;protein_id=NP_629093.1;transl_table=11
NC_003888.3	RefSeq	gene	5375964	5376644	.	-	.	ID=gene4994;Dbxref=GeneID:1100383;Name=2SCK31.02c;gbkey=Gene;gene=2SCK31.02c;gene_biotype=protein_coding;gene_synonym=2SCK31.02c;locus_tag=SCO4942
NC_003888.3	RefSeq	CDS	5375964	5376644	.	-	0	ID=cds4894;Parent=gene4994;Dbxref=Genbank:NP_629094.1,GeneID:1100383;Name=NP_629094.1;Note=2SCK31.02c%2C possible regulatory protein%2C len: 226 aa%3B similar to TR:Q9KXX1 (EMBL:AL357432) Streptomyces coelicolor  transcriptional regulator SCD95A.03c%2C 199 aa%3B fasta scores: opt: 414 z-score: 464.7 E(): 2.4e-18%3B 38.2%25 identity in 204 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=2SCK31.02c;product=regulatory protein;protein_id=NP_629094.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5376402	5376542	.	-	.	ID=id6313;Dbxref=GeneID:1100383;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 49.20%2C E-value 4.1e-11;gbkey=misc_feature;gene=2SCK31.02c
NC_003888.3	RefSeq	ribosome_entry_site	5376753	5376757	.	+	.	ID=id6314;gbkey=RBS
NC_003888.3	RefSeq	gene	5376765	5377757	.	+	.	ID=gene4995;Dbxref=GeneID:1100384;Name=2SCK31.03;gbkey=Gene;gene=2SCK31.03;gene_biotype=protein_coding;gene_synonym=2SCK31.03;locus_tag=SCO4943
NC_003888.3	RefSeq	CDS	5376765	5377757	.	+	0	ID=cds4895;Parent=gene4995;Dbxref=Genbank:NP_629095.1,GeneID:1100384;Name=NP_629095.1;Note=2SCK31.03%2C probable oxidoreductase%2C len: 330 aa%3B similar to TR:AAG05923 (EMBL:AE004681) Pseudomonas aeruginosa probable oxidoreductase PA2535%2C 331 aa%3B fasta scores: opt: 1001 z-score: 1136.6 E(): 0%3B 48.2%25 identity in 328 aa overlap. Contains Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family;gbkey=CDS;gene=2SCK31.03;product=oxidoreductase;protein_id=NP_629095.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5377374	5377682	.	+	.	ID=id6315;Dbxref=GeneID:1100384;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 21.20%2C E-value 4.9e-05;gbkey=misc_feature;gene=2SCK31.03
NC_003888.3	RefSeq	gene	5377855	5378730	.	-	.	ID=gene4996;Dbxref=GeneID:1100385;Name=2SCK31.04c;gbkey=Gene;gene=2SCK31.04c;gene_biotype=protein_coding;gene_synonym=2SCK31.04c;locus_tag=SCO4944
NC_003888.3	RefSeq	CDS	5377855	5378730	.	-	0	ID=cds4896;Parent=gene4996;Dbxref=Genbank:NP_629096.1,GeneID:1100385;Name=NP_629096.1;Note=2SCK31.04c%2C possible DNA-binding protein%2C len: 314 aa%3B similar to TR:Q9RI67 (EMBL:AL109949) Streptomyces coelicolor  DNA-binding protein SCJ11.39c%2C 279 aa%3B fasta scores: opt: 544 z-score: 640.7 E(): 3.8e-28%3B 40.2%25 identity in 249 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and possible helix-turn-helix motif at residues 64..85 (+4.67 SD);gbkey=CDS;gene=2SCK31.04c;product=DNA-binding protein;protein_id=NP_629096.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5378470	5378643	.	-	.	ID=id6316;Dbxref=GeneID:1100385;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 25.50%2C E-value 0.0012;gbkey=misc_feature;gene=2SCK31.04c
NC_003888.3	RefSeq	ribosome_entry_site	5378733	5378737	.	-	.	ID=id6317;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5378887	5378890	.	+	.	ID=id6318;gbkey=RBS
NC_003888.3	RefSeq	gene	5378899	5379939	.	+	.	ID=gene4997;Dbxref=GeneID:1100386;Name=2SCK31.05;gbkey=Gene;gene=2SCK31.05;gene_biotype=protein_coding;gene_synonym=2SCK31.05;locus_tag=SCO4945
NC_003888.3	RefSeq	CDS	5378899	5379939	.	+	0	ID=cds4897;Parent=gene4997;Dbxref=Genbank:NP_629097.1,GeneID:1100386;Name=NP_629097.1;Note=2SCK31.05%2C probable dehydrogenase%2C len: 346 aa%3B highly similar to SW:ADH_MYCTU (EMBL:AL021287) Mycobacterium bovis NADP-dependent alcohol dehydrogenase AdhC%2C 346 aa%3B fasta scores: opt: 1508 z-score: 1698.9 E(): 0%3B 64.5%25 identity in 346 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and matches to Prosite entries PS00059 Zinc-containing alcohol dehydrogenases signature and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SCK31.05;product=dehydrogenase;protein_id=NP_629097.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5378941	5379927	.	+	.	ID=id6319;Dbxref=GeneID:1100386;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 372.20%2C E-value 5.2e-108;gbkey=misc_feature;gene=2SCK31.05
NC_003888.3	RefSeq	sequence_feature	5379082	5379126	.	+	.	ID=id6320;Dbxref=GeneID:1100386;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=2SCK31.05
NC_003888.3	RefSeq	sequence_feature	5379736	5379759	.	+	.	ID=id6321;Dbxref=GeneID:1100386;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCK31.05
NC_003888.3	RefSeq	ribosome_entry_site	5380103	5380106	.	+	.	ID=id6322;gbkey=RBS
NC_003888.3	RefSeq	gene	5380116	5380907	.	+	.	ID=gene4998;Dbxref=GeneID:1100387;Name=2SCK31.06;gbkey=Gene;gene=2SCK31.06;gene_biotype=protein_coding;gene_synonym=2SCK31.06;locus_tag=SCO4946
NC_003888.3	RefSeq	CDS	5380116	5380907	.	+	0	ID=cds4898;Parent=gene4998;Dbxref=Genbank:NP_629098.1,GeneID:1100387;Name=NP_629098.1;Note=2SCK31.06%2C hypothetical protein%2C len: 263 aa%3B highly similar to TR:Q9L114 (EMBL:AL159139) Streptomyces coelicolor hypothetical 27.0 kDa protein SCL6.02%2C 255 aa%3B fasta scores: opt: 711 z-score: 830.9 E(): 0%3B 49.4%25 identity in 253 aa overlap;gbkey=CDS;gene=2SCK31.06;product=hypothetical protein;protein_id=NP_629098.1;transl_table=11
NC_003888.3	RefSeq	gene	5381148	5384831	.	+	.	ID=gene4999;Dbxref=GeneID:1100388;Name=2SCK31.07;gbkey=Gene;gene=2SCK31.07;gene_biotype=protein_coding;gene_synonym=2SCK31.07,narG3;locus_tag=SCO4947
NC_003888.3	RefSeq	CDS	5381148	5384831	.	+	0	ID=cds4899;Parent=gene4999;Dbxref=Genbank:NP_629099.1,GeneID:1100388;Name=NP_629099.1;Note=2SCK31.07%2C narG3%2C nitrate reductase alpha chain%2C len: 1227 aa%3B highly similar to SW:NARG_BACSU (EMBL:Z49884) Bacillus subtilis nitrate reductase alpha chain (EC 1.7.99.4)NarG%2C 1228 aa%3B fasta scores: opt: 4080 z-score: 4618.0 E(): 0%3B 49.5%25 identity in 1206 aa overlap and to TR:O86717 (EMBL:AL031515) Streptomyces coelicolor NarG%2C nitrate reductase alpha chain SC5C7.20%2C 1231 aa%3B fasta scores: opt: 5648 z-score: 5294.1 E(): 0%3B 66.6%25 identity in 1232 aa overlap. Contains Pfam matches to entries PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases and PF01568 Molydop_binding%2C Molydopterin dinucleotide binding domain and matches to Prosite entries PS00551 Prokaryotic molybdopterin oxidoreductases signature 1 and PS00490 Prokaryotic molybdopterin oxidoreductases signature 2;gbkey=CDS;gene=2SCK31.07;product=nitrate reductase subunit alpha NarG3;protein_id=NP_629099.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5381298	5381354	.	+	.	ID=id6323;Dbxref=GeneID:1100388;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1;gbkey=misc_feature;gene=2SCK31.07
NC_003888.3	RefSeq	sequence_feature	5383422	5383613	.	+	.	ID=id6324;Dbxref=GeneID:1100388;Note=Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 97.30%2C E-value 9e-31;gbkey=misc_feature;gene=2SCK31.07
NC_003888.3	RefSeq	sequence_feature	5383449	5383502	.	+	.	ID=id6325;Dbxref=GeneID:1100388;Note=PS00490 Prokaryotic molybdopterin oxidoreductases signature 2;gbkey=misc_feature;gene=2SCK31.07
NC_003888.3	RefSeq	sequence_feature	5384385	5384750	.	+	.	ID=id6326;Dbxref=GeneID:1100388;Note=Pfam match to entry PF01568 Molydop_binding%2C Molydopterin dinucleotide binding domain%2C score 118.70%2C E-value 1.1e-31;gbkey=misc_feature;gene=2SCK31.07
NC_003888.3	RefSeq	gene	5384840	5386486	.	+	.	ID=gene5000;Dbxref=GeneID:1100389;Name=2SCK31.08;gbkey=Gene;gene=2SCK31.08;gene_biotype=protein_coding;gene_synonym=2SCK31.08,narH3;locus_tag=SCO4948
NC_003888.3	RefSeq	CDS	5384840	5386486	.	+	0	ID=cds4900;Parent=gene5000;Dbxref=Genbank:NP_629100.1,GeneID:1100389;Name=NP_629100.1;Note=2SCK31.08%2C narH3%2C nitrate reductase beta chain%2C len: 548 aa%3B highly similar to SW:NARH_BACSU (EMBL:Z49884) Bacillus subtilis nitrate reductase beta chain NarH%2C 487 aa%3B fasta scores: opt: 2088 z-score: 2047.9 E(): 0%3B 58.2%25 identity in 483 aa overlap and to TR:O86716 (EMBL:AL031515) Streptomyces coelicolor NarH%2C nitrate reductase beta chain SC5C7.19%2C 531 aa%3B fasta scores: opt: 2542 z-score: 2343.2 E(): 0%3B 71.6%25 identity in 503 aa overlap;gbkey=CDS;gene=2SCK31.08;product=nitrate reductase subunit beta NarH3;protein_id=NP_629100.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5386471	5386474	.	+	.	ID=id6327;Dbxref=GeneID:1100389;gbkey=RBS;gene=2SCK31.08
NC_003888.3	RefSeq	gene	5386483	5387145	.	+	.	ID=gene5001;Dbxref=GeneID:1100390;Name=2SCK31.09;gbkey=Gene;gene=2SCK31.09;gene_biotype=protein_coding;gene_synonym=2SCK31.09,narJ3;locus_tag=SCO4949
NC_003888.3	RefSeq	CDS	5386483	5387145	.	+	0	ID=cds4901;Parent=gene5001;Dbxref=Genbank:NP_629101.1,GeneID:1100390;Name=NP_629101.1;Note=2SCK31.09%2C narJ3%2C nitrate reductase delta chain%2C len: 237 aa%3B similar to SW:NARJ_BACSU (EMBL:Z49884) Bacillus subtilis nitrate reductase delta chain (EC 1.7.99.4) NarJ%2C 184 aa%3B fasta scores: opt: 332 z-score: 411.9 E(): 2.1e-15%3B 35.0%25 identity in 163 aa overlap and to TR:Q9RI30 (EMBL:AL109989) Streptomyces coelicolor NarJ2 SCJ12.30 %2C 267 aa%3B fasta scores: opt: 436 z-score: 447.2 E(): 3.3e-19%3B 41.7%25 identity in 204 aa overlap;gbkey=CDS;gene=2SCK31.09;product=nitrate reductase subunit delta NarJ3;protein_id=NP_629101.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5387131	5387134	.	+	.	ID=id6328;Dbxref=GeneID:1100390;gbkey=RBS;gene=2SCK31.09
NC_003888.3	RefSeq	gene	5387142	5387855	.	+	.	ID=gene5002;Dbxref=GeneID:1100391;Name=2SCK31.10;gbkey=Gene;gene=2SCK31.10;gene_biotype=protein_coding;gene_synonym=2SCK31.10,narI3;locus_tag=SCO4950
NC_003888.3	RefSeq	CDS	5387142	5387855	.	+	0	ID=cds4902;Parent=gene5002;Dbxref=Genbank:NP_629102.1,GeneID:1100391;Name=NP_629102.1;Note=2SCK31.10%2C narI3%2C nitrate reductase gamma chain%2C len: 237 aa%3B highly similar to SW:NARI_BACSU (EMBL:Z49884) Bacillus subtilis nitrate reductase gamma chain (EC 1.7.99.4) NarI%2C 223 aa%3B fasta scores: opt: 792 z-score: 991.9 E(): 0%3B 49.6%25 identity in 234 aa overlap and to TR:Q9RI29 (EMBL:109989) Streptomyces coelicolor nitrate reductase delta chain NarI2 SCJ12.31%2C 256 aa%3B fasta scores: opt: 813 z-score: 891.7 E(): 0%3B 54.3%25 identity in 230 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK31.10;product=nitrate reductase subunit gamma NarI3;protein_id=NP_629102.1;transl_table=11
NC_003888.3	RefSeq	gene	5387898	5388935	.	-	.	ID=gene5003;Dbxref=GeneID:1100392;Name=2SCK31.11c;gbkey=Gene;gene=2SCK31.11c;gene_biotype=protein_coding;gene_synonym=2SCK31.11c;locus_tag=SCO4951
NC_003888.3	RefSeq	CDS	5387898	5388935	.	-	0	ID=cds4903;Parent=gene5003;Dbxref=Genbank:NP_629103.1,GeneID:1100392;Name=NP_629103.1;Note=2SCK31.11c%2C probable aldoketoreductase%2C len: 345 aa%3B similar to TR:Q9XC70 (EMBL:AF147704) Streptomyces fradiae NDP-hexose 2%2C3-enoyl reductase TylCII%2C 329 aa%3B fasta scores: opt: 726 z-score: 830.3 E(): 0%3B 41.3%25 identity in 320 aa overlap. Contains 2x Pfam matches to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family;gbkey=CDS;gene=2SCK31.11c;product=aldoketoreductase;protein_id=NP_629103.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5388573	5388632	.	-	.	ID=id6329;Dbxref=GeneID:1100392;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 11.80%2C E-value 0.024;gbkey=misc_feature;gene=2SCK31.11c
NC_003888.3	RefSeq	sequence_feature	5388711	5388854	.	-	.	ID=id6330;Dbxref=GeneID:1100392;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 1.20%2C E-value 25;gbkey=misc_feature;gene=2SCK31.11c
NC_003888.3	RefSeq	ribosome_entry_site	5388943	5388947	.	-	.	ID=id6331;gbkey=RBS
NC_003888.3	RefSeq	gene	5389080	5389676	.	+	.	ID=gene5004;Dbxref=GeneID:1100393;Name=2SCK31.12;gbkey=Gene;gene=2SCK31.12;gene_biotype=protein_coding;gene_synonym=2SCK31.12;locus_tag=SCO4952
NC_003888.3	RefSeq	CDS	5389080	5389676	.	+	0	ID=cds4904;Parent=gene5004;Dbxref=Genbank:NP_629104.1,GeneID:1100393;Name=NP_629104.1;Note=2SCK31.12%2C probable tetR-family transcriptional regulator%2C len: 198 aa%3B similar to TR:Q9RJL5 (EMBL:AL121849) Streptomyces coelicolor tetR-family transcriptional regulator SCF6.16%2C 194 aa%3B fasta scores: opt: 355 z-score: 451.5 E(): 1.3e-17%3B 35.1%25 identity in 185 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 42..63 (+4.18 SD);gbkey=CDS;gene=2SCK31.12;product=TetR family transcriptional regulator;protein_id=NP_629104.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5389158	5389295	.	+	.	ID=id6332;Dbxref=GeneID:1100393;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 54.40%2C E-value 1.8e-12;gbkey=misc_feature;gene=2SCK31.12
NC_003888.3	RefSeq	gene	5389724	5389918	.	+	.	ID=gene5005;Dbxref=GeneID:1100394;Name=2SCK31.13;gbkey=Gene;gene=2SCK31.13;gene_biotype=protein_coding;gene_synonym=2SCK31.13;locus_tag=SCO4953
NC_003888.3	RefSeq	CDS	5389724	5389918	.	+	0	ID=cds4905;Parent=gene5005;Dbxref=Genbank:NP_629105.1,GeneID:1100394;Name=NP_629105.1;Note=2SCK31.13%2C unknown%2C len: 64 aa;gbkey=CDS;gene=2SCK31.13;product=hypothetical protein;protein_id=NP_629105.1;transl_table=11
NC_003888.3	RefSeq	gene	5389941	5390534	.	-	.	ID=gene5006;Dbxref=GeneID:1100395;Name=2SCK31.14c;gbkey=Gene;gene=2SCK31.14c;gene_biotype=protein_coding;gene_synonym=2SCK31.14c;locus_tag=SCO4954
NC_003888.3	RefSeq	CDS	5389941	5390534	.	-	0	ID=cds4906;Parent=gene5006;Dbxref=Genbank:NP_629106.1,GeneID:1100395;Name=NP_629106.1;Note=2SCK31.14c%2C unknown%2C len: 197 aa;gbkey=CDS;gene=2SCK31.14c;product=hypothetical protein;protein_id=NP_629106.1;transl_table=11
NC_003888.3	RefSeq	gene	5390665	5391852	.	-	.	ID=gene5007;Dbxref=GeneID:1100396;Name=2SCK31.15c;gbkey=Gene;gene=2SCK31.15c;gene_biotype=protein_coding;gene_synonym=2SCK31.15c;locus_tag=SCO4955
NC_003888.3	RefSeq	CDS	5390665	5391852	.	-	0	ID=cds4907;Parent=gene5007;Dbxref=Genbank:NP_629107.1,GeneID:1100396;Name=NP_629107.1;Note=2SCK31.15c%2C hypothetical protein%2C len: 395 aa%3B similar to TR:Q9X8V7 (EMBL:AL078610) Streptomyces coelicolor hypothetical 43.9 kDa protein SCH35.49c%2C 410 aa%3B fasta scores: opt: 1788 z-score: 1973.1 E(): 0%3B 63.8%25 identity in 398 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SCK31.15c;product=ATP/GTP-binding protein;protein_id=NP_629107.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5391034	5391057	.	-	.	ID=id6333;Dbxref=GeneID:1100396;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCK31.15c
NC_003888.3	RefSeq	ribosome_entry_site	5391999	5392003	.	+	.	ID=id6334;gbkey=RBS
NC_003888.3	RefSeq	gene	5392010	5392528	.	+	.	ID=gene5008;Dbxref=GeneID:1100397;Name=2SCK31.16;gbkey=Gene;gene=2SCK31.16;gene_biotype=protein_coding;gene_synonym=2SCK31.16;locus_tag=SCO4956
NC_003888.3	RefSeq	CDS	5392010	5392528	.	+	0	ID=cds4908;Parent=gene5008;Dbxref=Genbank:NP_629108.1,GeneID:1100397;Name=NP_629108.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;gene=2SCK31.16;product=methionine sulfoxide reductase A;protein_id=NP_629108.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5392025	5392486	.	+	.	ID=id6335;Dbxref=GeneID:1100397;Note=Pfam match to entry PF01625 PMSR%2C Peptide methionine sulfoxide reductase%2C score 322.70%2C E-value 4.3e-93;gbkey=misc_feature;gene=2SCK31.16
NC_003888.3	RefSeq	gene	5392632	5393750	.	-	.	ID=gene5009;Dbxref=GeneID:1100398;Name=2SCK31.17c;gbkey=Gene;gene=2SCK31.17c;gene_biotype=protein_coding;gene_synonym=2SCK31.17c;locus_tag=SCO4957
NC_003888.3	RefSeq	CDS	5392632	5393750	.	-	0	ID=cds4909;Parent=gene5009;Dbxref=Genbank:NP_629109.1,GeneID:1100398;Name=NP_629109.1;Note=2SCK31.17c%2C membrane protein%2C len: 372 aa%3B similar to TR:Q9S2T3 (EMBL:AL096884) Streptomyces coelicolor hypothetical 40.5 kDa protein SC4G6.25%2C 376 aa%3B fasta scores: opt: 334 z-score: 393.9 E(): 2.1e-14 34.3%25 identity in 324 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCK31.17c;product=hypothetical protein;protein_id=NP_629109.1;transl_table=11
NC_003888.3	RefSeq	gene	5393841	5395001	.	+	.	ID=gene5010;Dbxref=GeneID:1100399;Name=2SCK31.18;gbkey=Gene;gene=2SCK31.18;gene_biotype=protein_coding;gene_synonym=2SCK31.18,metB;locus_tag=SCO4958
NC_003888.3	RefSeq	CDS	5393841	5395001	.	+	0	ID=cds4910;Parent=gene5010;Dbxref=Genbank:NP_629110.1,GeneID:1100399;Name=NP_629110.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;gene=2SCK31.18;product=cystathionine gamma-synthase;protein_id=NP_629110.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5393877	5394998	.	+	.	ID=id6336;Dbxref=GeneID:1100399;Note=Pfam match to entry PF01053 Cys_Met_Meta_PP%2C Cys/Met metabolism PLP-dependent enzyme%2C score 745.00%2C E-value 3.3e-220;gbkey=misc_feature;gene=2SCK31.18
NC_003888.3	RefSeq	sequence_feature	5394768	5394839	.	+	.	ID=id6337;Dbxref=GeneID:1100399;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1;gbkey=misc_feature;gene=2SCK31.18
NC_003888.3	RefSeq	gene	5395012	5395269	.	-	.	ID=gene5011;Dbxref=GeneID:1100400;Name=2SCK31.19c;gbkey=Gene;gene=2SCK31.19c;gene_biotype=protein_coding;gene_synonym=2SCK31.19c;locus_tag=SCO4959
NC_003888.3	RefSeq	CDS	5395012	5395269	.	-	0	ID=cds4911;Parent=gene5011;Dbxref=Genbank:NP_629111.1,GeneID:1100400;Name=NP_629111.1;Note=2SCK31.19c%2C possible membrane protein%2C len: 85 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCK31.19c;product=hypothetical protein;protein_id=NP_629111.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5395275	5395279	.	-	.	ID=id6338;gbkey=RBS
NC_003888.3	RefSeq	gene	5395316	5395822	.	-	.	ID=gene5012;Dbxref=GeneID:1100401;Name=2SCK31.20c;gbkey=Gene;gene=2SCK31.20c;gene_biotype=protein_coding;gene_synonym=2SCK31.20c;locus_tag=SCO4960
NC_003888.3	RefSeq	CDS	5395316	5395822	.	-	0	ID=cds4912;Parent=gene5012;Dbxref=Genbank:NP_629112.1,GeneID:1100401;Name=NP_629112.1;Note=2SCK31.20c%2C possible sigma factor%2C len: 168 aa%3B similar to SW:RPOE_STRCO (EMBL:L29636) Streptomyces coelicolor RNA polymerase sigma-E factor SigE%2C 176 aa%3B fasta scores: opt: 108 z-score: 140.1 E(): 2.9%3B 30.8%25 identity in 156 aa overlap;gbkey=CDS;gene=2SCK31.20c;product=sigma factor;protein_id=NP_629112.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5395827	5395831	.	-	.	ID=id6339;gbkey=RBS
NC_003888.3	RefSeq	gene	5396005	5396505	.	-	.	ID=gene5013;Dbxref=GeneID:1100402;Name=2SCK31.21c;gbkey=Gene;gene=2SCK31.21c;gene_biotype=protein_coding;gene_synonym=2SCK31.21c;locus_tag=SCO4961
NC_003888.3	RefSeq	CDS	5396005	5396505	.	-	0	ID=cds4913;Parent=gene5013;Dbxref=Genbank:NP_629113.1,GeneID:1100402;Name=NP_629113.1;Note=2SCK31.21c possible marR-family transcriptional regulator%2C len: 166 aa%3B similar to SW:YXAD_BACSU (EMBL:AB005554) Bacillus subtilis hypothetical transcriptional regulator in AsnH-GntR intergenic region YxaD%2C 143 aa%3B fasta scores: opt: 268 z-score: 338.9 E(): 2.4e-11%3B 35.0%25 identity in 137 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and possible helix-turn-helix motif at residues 58..79 (+2.70 SD);gbkey=CDS;gene=2SCK31.21c;product=MarR family transcriptional regulator;protein_id=NP_629113.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5396074	5396385	.	-	.	ID=id6340;Dbxref=GeneID:1100402;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 96.00%2C E-value 7.4e-25;gbkey=misc_feature;gene=2SCK31.21c
NC_003888.3	RefSeq	ribosome_entry_site	5396668	5396671	.	+	.	ID=id6341;gbkey=RBS
NC_003888.3	RefSeq	gene	5396674	5397903	.	+	.	ID=gene5014;Dbxref=GeneID:1100403;Name=2SCK31.22;gbkey=Gene;gene=2SCK31.22;gene_biotype=protein_coding;gene_synonym=2SCK31.22;locus_tag=SCO4962
NC_003888.3	RefSeq	CDS	5396674	5397903	.	+	0	ID=cds4914;Parent=gene5014;Dbxref=Genbank:NP_629114.1,GeneID:1100403;Name=NP_629114.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine;gbkey=CDS;gene=2SCK31.22;product=threonine dehydratase;protein_id=NP_629114.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5396743	5397612	.	+	.	ID=id6342;Dbxref=GeneID:1100403;Note=Pfam match to entry PF00291 PALP%2C Pyridoxal-phosphate dependent enzyme%2C score 254.90%2C E-value 1.1e-72;gbkey=misc_feature;gene=2SCK31.22
NC_003888.3	RefSeq	sequence_feature	5396827	5396868	.	+	.	ID=id6343;Dbxref=GeneID:1100403;Note=PS00165 Ser/Thr dehydratases pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=2SCK31.22
NC_003888.3	RefSeq	ribosome_entry_site	5398054	5398057	.	+	.	ID=id6344;gbkey=RBS
NC_003888.3	RefSeq	gene	5398064	5399071	.	+	.	ID=gene5015;Dbxref=GeneID:1100404;Name=2SCK31.23;gbkey=Gene;gene=2SCK31.23;gene_biotype=protein_coding;gene_synonym=2SCK31.23;locus_tag=SCO4963
NC_003888.3	RefSeq	CDS	5398064	5399071	.	+	0	ID=cds4915;Parent=gene5015;Dbxref=Genbank:NP_629115.1,GeneID:1100404;Name=NP_629115.1;Note=2SCK31.23%2C possible ABC transporter ATP-binding protein%2C len: 335 aa%3B similar to TR:CAC08315 (EMBL:AL392149) Streptomyces coelicolor ABC transport system ATP-binding protein SCD19A.14%2C 336 aa%3B fasta scores: opt: 1211 z-score: 1254.5 E(): 0%3B 58.2%25 identity in 330 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=2SCK31.23;product=ABC transporter ATP-binding protein;protein_id=NP_629115.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5398151	5398696	.	+	.	ID=id6345;Dbxref=GeneID:1100404;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 194.70%2C E-value 1.4e-54;gbkey=misc_feature;gene=2SCK31.23
NC_003888.3	RefSeq	sequence_feature	5398172	5398195	.	+	.	ID=id6346;Dbxref=GeneID:1100404;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCK31.23
NC_003888.3	RefSeq	sequence_feature	5398469	5398513	.	+	.	ID=id6347;Dbxref=GeneID:1100404;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SCK31.23
NC_003888.3	RefSeq	ribosome_entry_site	5399054	5399059	.	+	.	ID=id6348;Dbxref=GeneID:1100404;gbkey=RBS;gene=2SCK31.23
NC_003888.3	RefSeq	gene	5399068	5399925	.	+	.	ID=gene5016;Dbxref=GeneID:1100405;Name=2SCK31.24;gbkey=Gene;gene=2SCK31.24;gene_biotype=protein_coding;gene_synonym=2SCK31.24;locus_tag=SCO4964
NC_003888.3	RefSeq	CDS	5399068	5399925	.	+	0	ID=cds4916;Parent=gene5016;Dbxref=Genbank:NP_629116.1,GeneID:1100405;Name=NP_629116.1;Note=2SCK31.24%2C probable integral membrane transport protein%2C len: 285 aa%3B similar to TR:AAG32069 (EMBL:AF317791) Streptomyces viridochromogenes hydrophobic transmembrane protein AviABCII%2C 265 aa%3B fasta scores: opt: 677 z-score: 786.2 E(): 0%3B 39.7%25 identity in 262 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK31.24;product=integral membrane transport protein;protein_id=NP_629116.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	5399968	5400014	.	-	.	ID=id6349;Note=possible stem loop. Score 56: 20/21 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5400027	5400524	.	-	.	ID=gene5017;Dbxref=GeneID:1100406;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;gene_synonym=2SCK31.25c;locus_tag=SCO4965
NC_003888.3	RefSeq	CDS	5400027	5400524	.	-	0	ID=cds4917;Parent=gene5017;Dbxref=Genbank:NP_629117.1,GeneID:1100406;Name=NP_629117.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=NP_629117.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5400036	5400509	.	-	.	ID=id6350;Dbxref=GeneID:1100406;Note=Pfam match to entry PF01272 GreA_GreB%2C Prokaryotic transcription elongation factor%2C GreA/GreB%2C score 171.50%2C E-value 1.4e-47;gbkey=misc_feature;gene=greA
NC_003888.3	RefSeq	sequence_feature	5400102	5400152	.	-	.	ID=id6351;Dbxref=GeneID:1100406;Note=PS00830 Prokaryotic transcription elongation factors signature 2;gbkey=misc_feature;gene=greA
NC_003888.3	RefSeq	ribosome_entry_site	5400532	5400535	.	-	.	ID=id6352;gbkey=RBS
NC_003888.3	RefSeq	gene	5400705	5401103	.	-	.	ID=gene5018;Dbxref=GeneID:1100407;Name=2SCK31.26c;gbkey=Gene;gene=2SCK31.26c;gene_biotype=protein_coding;gene_synonym=2SCK31.26c;locus_tag=SCO4966
NC_003888.3	RefSeq	CDS	5400705	5401103	.	-	0	ID=cds4918;Parent=gene5018;Dbxref=Genbank:NP_629118.1,GeneID:1100407;Name=NP_629118.1;Note=2SCK31.26c%2C possible membrane protein%2C len: 132 aa%3B similar to TR:O53429 (EMBL:AL021897) Mycobacterium tuberculosis hypothetical 15.4 kDa protein MTV017.34c%2C 144 aa%3B fasta scores: opt: 186 z-score: 240.5 E(): 7.4e-06%3B 27.9%25 identity in 136 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCK31.26c;product=hypothetical protein;protein_id=NP_629118.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5401110	5401113	.	-	.	ID=id6353;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5401222	5401225	.	+	.	ID=id6354;gbkey=RBS
NC_003888.3	RefSeq	gene	5401234	5402115	.	+	.	ID=gene5019;Dbxref=GeneID:1100408;Name=2SCK31.27;gbkey=Gene;gene=2SCK31.27;gene_biotype=protein_coding;gene_synonym=2SCK31.27;locus_tag=SCO4967
NC_003888.3	RefSeq	CDS	5401234	5402115	.	+	0	ID=cds4919;Parent=gene5019;Dbxref=Genbank:NP_629119.1,GeneID:1100408;Name=NP_629119.1;Note=2SCK31.27%2C conserved hypothetical protein%2C len: 293 aa%3B highly similar to TR:O53430 (EMBL:AL021897) Mycobacterium tuberculosis hypothetical 32.7 kDa protein MTV017.35%2C 288 aa%3B fasta scores: opt: 992 z-score: 1173.4 E(): 0%3B 52.3%25 identity in 287 aa overlap;gbkey=CDS;gene=2SCK31.27;product=hypothetical protein;protein_id=NP_629119.1;transl_table=11
NC_003888.3	RefSeq	gene	5402117	5402344	.	+	.	ID=gene5020;Dbxref=GeneID:1100409;Name=2SCK31.28;gbkey=Gene;gene=2SCK31.28;gene_biotype=protein_coding;gene_synonym=2SCK31.28;locus_tag=SCO4968
NC_003888.3	RefSeq	CDS	5402117	5402344	.	+	0	ID=cds4920;Parent=gene5020;Dbxref=Genbank:NP_629120.1,GeneID:1100409;Name=NP_629120.1;Note=2SCK31.28%2C possible membrane protein%2C len: 75 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCK31.28;product=hypothetical protein;protein_id=NP_629120.1;transl_table=11
NC_003888.3	RefSeq	gene	5402381	5405884	.	-	.	ID=gene5021;Dbxref=GeneID:1100410;Name=2SCK31.29c;gbkey=Gene;gene=2SCK31.29c;gene_biotype=protein_coding;gene_synonym=2SCK31.29c;locus_tag=SCO4969
NC_003888.3	RefSeq	CDS	5402381	5405884	.	-	0	ID=cds4921;Parent=gene5021;Dbxref=Genbank:NP_629121.1,GeneID:1100410;Name=NP_629121.1;Note=2SCK31.29c%2C possible regulatory protein%2C len: 1167 aa%3B similar in its middle domain to SW:AFSR_STRCO (EMBL:D90155) Streptomyces coelicolor regulatory protein AfsR%2C 993 aa%3B fasta scores: opt: 298 z-score: 279.4 E(): 5e-08%3B 28.9%25 identity in 806 aa overlap. Contains 5x Pfam matches to entry PF00515 TPR%2C TPR Domain;gbkey=CDS;gene=2SCK31.29c;product=regulatory protein;protein_id=NP_629121.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5402933	5403034	.	-	.	ID=id6355;Dbxref=GeneID:1100410;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 5.30%2C E-value 13;gbkey=misc_feature;gene=2SCK31.29c
NC_003888.3	RefSeq	sequence_feature	5403053	5403154	.	-	.	ID=id6356;Dbxref=GeneID:1100410;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 7.10%2C E-value 8.3;gbkey=misc_feature;gene=2SCK31.29c
NC_003888.3	RefSeq	sequence_feature	5403173	5403274	.	-	.	ID=id6357;Dbxref=GeneID:1100410;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 13.90%2C E-value 1.5;gbkey=misc_feature;gene=2SCK31.29c
NC_003888.3	RefSeq	sequence_feature	5403293	5403394	.	-	.	ID=id6358;Dbxref=GeneID:1100410;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 3.40%2C E-value 20;gbkey=misc_feature;gene=2SCK31.29c
NC_003888.3	RefSeq	sequence_feature	5403413	5403514	.	-	.	ID=id6359;Dbxref=GeneID:1100410;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 17.00%2C E-value 0.45;gbkey=misc_feature;gene=2SCK31.29c
NC_003888.3	RefSeq	sequence_feature	5404732	5404820	.	-	.	ID=id6360;Dbxref=GeneID:1100410;Note=High G+C content region (89.88%25);gbkey=misc_feature;gene=2SCK31.29c
NC_003888.3	RefSeq	gene	5405887	5406039	.	-	.	ID=gene5022;Dbxref=GeneID:1100411;Name=2SCK31.30c;gbkey=Gene;gene=2SCK31.30c;gene_biotype=protein_coding;gene_synonym=2SCK31.30c;locus_tag=SCO4970
NC_003888.3	RefSeq	CDS	5405887	5406039	.	-	0	ID=cds4922;Parent=gene5022;Dbxref=Genbank:NP_629122.1,GeneID:1100411;Name=NP_629122.1;Note=2SCK31.30c%2C unknown%2C len: 50 aa;gbkey=CDS;gene=2SCK31.30c;product=hypothetical protein;protein_id=NP_629122.1;transl_table=11
NC_003888.3	RefSeq	gene	5406195	5407688	.	+	.	ID=gene5023;Dbxref=GeneID:1100412;Name=2SCK31.31;gbkey=Gene;gene=2SCK31.31;gene_biotype=protein_coding;gene_synonym=2SCK31.31;locus_tag=SCO4971
NC_003888.3	RefSeq	CDS	5406195	5407688	.	+	0	ID=cds4923;Parent=gene5023;Dbxref=Genbank:NP_629123.1,GeneID:1100412;Name=NP_629123.1;Note=2SCK31.31%2C possible dehydrogenase%2C len: 497 aa%3B similar to N-terminal domain of SW:XDH_MOUSE (EMBL:X75129) Mus musculus xanthine dehydrogenase/oxidase Xdh%2C 1335 aa%3B fasta scores: opt: 345 z-score: 361.7 E(): 1.3e-12 31.5%25 identity in 483 aa overlap and to TR:O54050 (EMBL:AJ001013) Rhodobacter capsulatus xanthine dehydrogenase (EC 1.1.1.204) XdhA%2C 462 aa%3B fasta scores: opt: 631 z-score: 669.1 E(): 9.8e-30%3B 38.2%25 identity in 495 aa overlap. Contains Pfam matches to entries PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C PF01799 fer2_2%2C [2Fe-2S] binding domain and PF00941 dehydrog_molyb%2C Molybdopterin binding domain in dehydrogenase and match to Prosite entry PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=2SCK31.31;product=dehydrogenase;protein_id=NP_629123.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5406204	5406419	.	+	.	ID=id6361;Dbxref=GeneID:1100412;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 37.80%2C E-value 2.6e-07;gbkey=misc_feature;gene=2SCK31.31
NC_003888.3	RefSeq	sequence_feature	5406312	5406338	.	+	.	ID=id6362;Dbxref=GeneID:1100412;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=2SCK31.31
NC_003888.3	RefSeq	sequence_feature	5406441	5406755	.	+	.	ID=id6363;Dbxref=GeneID:1100412;Note=Pfam match to entry PF01799 fer2_2%2C [2Fe-2S] binding domain%2C score 80.70%2C E-value 3.1e-20;gbkey=misc_feature;gene=2SCK31.31
NC_003888.3	RefSeq	sequence_feature	5406834	5407682	.	+	.	ID=id6364;Dbxref=GeneID:1100412;Note=Pfam match to entry PF00941 dehydrog_molyb%2C Molybdopterin binding domain in dehydrogenase%2C score 220.00%2C E-value 3.6e-62;gbkey=misc_feature;gene=2SCK31.31
NC_003888.3	RefSeq	ribosome_entry_site	5407671	5407674	.	+	.	ID=id6365;Dbxref=GeneID:1100412;gbkey=RBS;gene=2SCK31.31
NC_003888.3	RefSeq	gene	5407685	5410105	.	+	.	ID=gene5024;Dbxref=GeneID:1100413;Name=2SCK31.32;gbkey=Gene;gene=2SCK31.32;gene_biotype=protein_coding;gene_synonym=2SCK31.32;locus_tag=SCO4972
NC_003888.3	RefSeq	CDS	5407685	5410105	.	+	0	ID=cds4924;Parent=gene5024;Dbxref=Genbank:NP_629124.1,GeneID:1100413;Name=NP_629124.1;Note=2SCK31.32%2C possible dehydrogenase%2C len: 806 aa%3B similar to the C-terminal region of SW:XDH_MOUSE (EMBL:X75129) Mus musculus xanthine dehydrogenase/oxidase Xdh%2C 1335 aa%3B fasta scores: opt: 1456 z-score: 1610.8 E(): 0%3B 43.3%25 identity in 767 aa overlap. Contains Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus;gbkey=CDS;gene=2SCK31.32;product=dehydrogenase;protein_id=NP_629124.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5407763	5409796	.	+	.	ID=id6366;Dbxref=GeneID:1100413;Note=Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score 826.40%2C E-value 2.5e-249;gbkey=misc_feature;gene=2SCK31.32
NC_003888.3	RefSeq	gene	5410107	5410928	.	+	.	ID=gene5025;Dbxref=GeneID:1100414;Name=2SCK31.33;gbkey=Gene;gene=2SCK31.33;gene_biotype=protein_coding;gene_synonym=2SCK31.33;locus_tag=SCO4973
NC_003888.3	RefSeq	CDS	5410107	5410928	.	+	0	ID=cds4925;Parent=gene5025;Dbxref=Genbank:NP_629125.1,GeneID:1100414;Name=NP_629125.1;Note=2SCK31.33%2C conserved hypothetical protein%2C len: 273 aa%3B similar to TR:Q9RYX5 (EMBL:AE001862) Deinococcus radiodurans conserved hypothetical protein DRA0179%2C 274 aa%3B fasta scores: opt: 888 z-score: 1076.8 E(): 0%3B 52.4%25 identity in 271 aa overlap;gbkey=CDS;gene=2SCK31.33;product=hypothetical protein;protein_id=NP_629125.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5411110	5411115	.	+	.	ID=id6367;gbkey=RBS
NC_003888.3	RefSeq	gene	5411121	5411624	.	+	.	ID=gene5026;Dbxref=GeneID:1100415;Name=2SCK31.34;gbkey=Gene;gene=2SCK31.34;gene_biotype=protein_coding;gene_synonym=2SCK31.34;locus_tag=SCO4974
NC_003888.3	RefSeq	CDS	5411121	5411624	.	+	0	ID=cds4926;Parent=gene5026;Dbxref=Genbank:NP_629126.1,GeneID:1100415;Name=NP_629126.1;Note=2SCK31.34%2C possible deaminase%2C len: 167 aa%3B similar to TR:AAG05887 (EMBL:AE004677) Pseudomonas aeruginosa probable deaminase PA2499%2C 151 aa%3B fasta scores: opt: 299 z-score: 372.9 E(): 3.1e-13%3B 36.6%25 identity in 123 aa overlap. Contains Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region;gbkey=CDS;gene=2SCK31.34;product=deaminase;protein_id=NP_629126.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5411205	5411444	.	+	.	ID=id6368;Dbxref=GeneID:1100415;Note=Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region%2C score 92.90%2C E-value 6.4e-24;gbkey=misc_feature;gene=2SCK31.34
NC_003888.3	RefSeq	gene	5411702	5413762	.	+	.	ID=gene5027;Dbxref=GeneID:1100416;Name=2SCK31.35;gbkey=Gene;gene=2SCK31.35;gene_biotype=protein_coding;gene_synonym=2SCK31.35;locus_tag=SCO4975
NC_003888.3	RefSeq	CDS	5411702	5413762	.	+	0	ID=cds4927;Parent=gene5027;Dbxref=Genbank:NP_629127.1,GeneID:1100416;Name=NP_629127.1;Note=2SCK31.35%2C conserved hypothetical protein%2C len: 680 aa%3B similar to SW:YYAL_BACSU (EMBL:D26185) Bacillus subtilis hypothetical 78.8 kDa protein in TetB-ExoA intergenic region YyaL%2C 689 aa%3B fasta scores: opt: 1541 z-score: 1751.9 E(): 0%3B 39.2%25 identity in 683 aa overlap. Contains match to Prosite entry PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature;gbkey=CDS;gene=2SCK31.35;product=hypothetical protein;protein_id=NP_629127.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5411714	5411718	.	+	.	ID=id6369;Dbxref=GeneID:1100416;gbkey=RBS;gene=2SCK31.35
NC_003888.3	RefSeq	sequence_feature	5411765	5411797	.	+	.	ID=id6370;Dbxref=GeneID:1100416;Note=PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature;gbkey=misc_feature;gene=2SCK31.35
NC_003888.3	RefSeq	gene	5413773	5414501	.	-	.	ID=gene5028;Dbxref=GeneID:1100417;Name=2SCK31.36c;gbkey=Gene;gene=2SCK31.36c;gene_biotype=protein_coding;gene_synonym=2SCK31.36c;locus_tag=SCO4976
NC_003888.3	RefSeq	CDS	5413773	5414501	.	-	0	ID=cds4928;Parent=gene5028;Dbxref=Genbank:NP_629128.1,GeneID:1100417;Name=NP_629128.1;Note=2SCK31.36c%2C conserved hypothetical protein%2C len: 242 aa%3B similar to TR:O53776 (EMBL:AL021942) Mycobacterium tuberculosis hypothetical 28.5 kDa protein MTV039.17%2C 252 aa%3B fasta scores: opt: 509 z-score: 573.9 E(): 2e-24%3B 42.3%25 identity in 241 aa overlap. Contains Pfam match to entry PF01927 DUF82%2C Protein of unknown function DUF82;gbkey=CDS;gene=2SCK31.36c;product=hypothetical protein;protein_id=NP_629128.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5413791	5414237	.	-	.	ID=id6371;Dbxref=GeneID:1100417;Note=Pfam match to entry PF01927 DUF82%2C Protein of unknown function DUF82%2C score 137.90%2C E-value 1.9e-37;gbkey=misc_feature;gene=2SCK31.36c
NC_003888.3	RefSeq	gene	5414535	5415242	.	-	.	ID=gene5029;Dbxref=GeneID:1100418;Name=2SCK31.37c;gbkey=Gene;gene=2SCK31.37c;gene_biotype=protein_coding;gene_synonym=2SCK31.37c;locus_tag=SCO4977
NC_003888.3	RefSeq	CDS	5414535	5415242	.	-	0	ID=cds4929;Parent=gene5029;Dbxref=Genbank:NP_629129.1,GeneID:1100418;Name=NP_629129.1;Note=2SCK31.37c%2C probable tetR-family transcriptional regulator%2C len: 235 aa%3B similar to SW:TCMR_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C transcriptional repressor TcmR%2C 226 aa%3B fasta scores: opt: 304 z-score: 354.3 E(): 3.4e-12%3B 37.2%25 identity in 218 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 46..67 (+5.26 SD);gbkey=CDS;gene=2SCK31.37c;product=TetR family transcriptional regulator;protein_id=NP_629129.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5415021	5415155	.	-	.	ID=id6372;Dbxref=GeneID:1100418;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 53.00%2C E-value 3.9e-12;gbkey=misc_feature;gene=2SCK31.37c
NC_003888.3	RefSeq	gene	5415297	5416001	.	-	.	ID=gene5030;Dbxref=GeneID:1100419;Name=2SCK36.01c;gbkey=Gene;gene=2SCK36.01c;gene_biotype=protein_coding;gene_synonym=2SCK36.01c;locus_tag=SCO4978
NC_003888.3	RefSeq	CDS	5415297	5416001	.	-	0	ID=cds4930;Parent=gene5030;Dbxref=Genbank:NP_629130.1,GeneID:1100419;Name=NP_629130.1;Note=2SCK36.01c%2C conserved hypothetical membrane protein%2C len: 234 aa%3B similar to SW:YA85_MYCTU (EMBL:AL021897) Mycobacterium tuberculosis hypothetical 26.0 kDa protein RV1085c or MTV017.38c%2C 242 aa%3B fasta scores: opt: 563 Z-score: 653.6 bits: 128.3 E(): 8.6e-29%3B 39.524%25 identity in 210 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK36.01c;product=hypothetical protein;protein_id=NP_629130.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5416278	5416282	.	+	.	ID=id6373;gbkey=RBS
NC_003888.3	RefSeq	gene	5416288	5418117	.	+	.	ID=gene5031;Dbxref=GeneID:1100420;Name=2SCK36.02;gbkey=Gene;gene=2SCK36.02;gene_biotype=protein_coding;gene_synonym=2SCK36.02;locus_tag=SCO4979
NC_003888.3	RefSeq	CDS	5416288	5418117	.	+	0	ID=cds4931;Parent=gene5031;Dbxref=Genbank:NP_629131.1,GeneID:1100420;Name=NP_629131.1;Note=catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP;gbkey=CDS;gene=2SCK36.02;product=phosphoenolpyruvate carboxykinase;protein_id=NP_629131.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5416342	5418111	.	+	.	ID=id6374;Dbxref=GeneID:1100420;Note=Pfam match to entry PF00821 PEPCK%2C Phosphoenolpyruvate carboxykinase%2C score 1344.70%2C E-value 0;gbkey=misc_feature;gene=2SCK36.02
NC_003888.3	RefSeq	sequence_feature	5417104	5417130	.	+	.	ID=id6375;Dbxref=GeneID:1100420;Note=PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature;gbkey=misc_feature;gene=2SCK36.02
NC_003888.3	RefSeq	gene	5418400	5419350	.	-	.	ID=gene5032;Dbxref=GeneID:1100421;Name=2SCK36.03c;gbkey=Gene;gene=2SCK36.03c;gene_biotype=protein_coding;gene_synonym=2SCK36.03c;locus_tag=SCO4980
NC_003888.3	RefSeq	CDS	5418400	5419350	.	-	0	ID=cds4932;Parent=gene5032;Dbxref=Genbank:NP_629132.1,GeneID:1100421;Name=NP_629132.1;Note=2SCK36.03c%2C unknown%2C len: 316 aa;gbkey=CDS;gene=2SCK36.03c;product=hypothetical protein;protein_id=NP_629132.1;transl_table=11
NC_003888.3	RefSeq	gene	5419347	5420747	.	-	.	ID=gene5033;Dbxref=GeneID:1100422;Name=2SCK36.04c;gbkey=Gene;gene=2SCK36.04c;gene_biotype=protein_coding;gene_synonym=2SCK36.04c;locus_tag=SCO4981
NC_003888.3	RefSeq	CDS	5419347	5420747	.	-	0	ID=cds4933;Parent=gene5033;Dbxref=Genbank:NP_629133.1,GeneID:1100422;Name=NP_629133.1;Note=2SCK36.04c%2C possible bifunctional protein%2C len: 466 aa%3B N-terminal region presents low similarity to N-terminal region of TR:O14362 (EMBL:Z97992) Schizosaccharomyces pombe glucan synthase-1 (EC 2.4.1.34) SPBC30D10.17c%2C 504 aa%3B fasta scores: opt: 176 Z-score: 188.3 bits: 44.3 E(): 0.0071%3B 24.931%25 identity in 361 aa overlap and C-terminal region to C-terminal region of TR:AAK22951 (EMBL:AE005774) Caulobacter crescentus oxidoreductase%2C GFO/IDH/MOCA family CC0967%2C 307 aa%3B fasta scores: opt: 146 Z-score: 160.2 bits: 38.4 E(): 0.26%3B 26.590%25 identity in 173 aa overlap;gbkey=CDS;gene=2SCK36.04c;product=hypothetical protein;protein_id=NP_629133.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5420755	5420758	.	-	.	ID=id6376;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5420923	5420929	.	+	.	ID=id6377;gbkey=RBS
NC_003888.3	RefSeq	gene	5420938	5421120	.	+	.	ID=gene5034;Dbxref=GeneID:1100423;Name=2SCK36.05;gbkey=Gene;gene=2SCK36.05;gene_biotype=protein_coding;gene_synonym=2SCK36.05;locus_tag=SCO4982
NC_003888.3	RefSeq	CDS	5420938	5421120	.	+	0	ID=cds4934;Parent=gene5034;Dbxref=Genbank:NP_629134.1,GeneID:1100423;Name=NP_629134.1;Note=2SCK36.05%2C membrane protein%2C len: 60 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCK36.05;product=hypothetical protein;protein_id=NP_629134.1;transl_table=11
NC_003888.3	RefSeq	gene	5421206	5421628	.	-	.	ID=gene5035;Dbxref=GeneID:1100424;Name=2SCK36.06c;gbkey=Gene;gene=2SCK36.06c;gene_biotype=protein_coding;gene_synonym=2SCK36.06c;locus_tag=SCO4983
NC_003888.3	RefSeq	CDS	5421206	5421628	.	-	0	ID=cds4935;Parent=gene5035;Dbxref=Genbank:NP_629135.1,GeneID:1100424;Name=NP_629135.1;Note=2SCK36.06c%2C unknown%2C len: 140 aa;gbkey=CDS;gene=2SCK36.06c;product=hypothetical protein;protein_id=NP_629135.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5421635	5421641	.	-	.	ID=id6378;gbkey=RBS
NC_003888.3	RefSeq	gene	5421700	5422911	.	-	.	ID=gene5036;Dbxref=GeneID:1100425;Name=2SCK36.07c;gbkey=Gene;gene=2SCK36.07c;gene_biotype=protein_coding;gene_synonym=2SCK36.07c;locus_tag=SCO4984
NC_003888.3	RefSeq	CDS	5421700	5422911	.	-	0	ID=cds4936;Parent=gene5036;Dbxref=Genbank:NP_629136.1,GeneID:1100425;Name=NP_629136.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;gene=2SCK36.07c;product=aminotransferase AlaT;protein_id=NP_629136.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5421715	5422896	.	-	.	ID=id6379;Dbxref=GeneID:1100425;Note=Pfam match to entry PF00155 aminotran_1%2C Aminotransferase class-I%2C score 99.70%2C E-value 5.7e-26;gbkey=misc_feature;gene=2SCK36.07c
NC_003888.3	RefSeq	gene	5423145	5423999	.	+	.	ID=gene5037;Dbxref=GeneID:1100426;Name=2SCK36.08;gbkey=Gene;gene=2SCK36.08;gene_biotype=protein_coding;gene_synonym=2SCK36.08;locus_tag=SCO4985
NC_003888.3	RefSeq	CDS	5423145	5423999	.	+	0	ID=cds4937;Parent=gene5037;Dbxref=Genbank:NP_629137.1,GeneID:1100426;Name=NP_629137.1;Note=2SCK36.08%2C unknown%2C len: 284 aa;gbkey=CDS;gene=2SCK36.08;product=hypothetical protein;protein_id=NP_629137.1;transl_table=11
NC_003888.3	RefSeq	gene	5424037	5425647	.	-	.	ID=gene5038;Dbxref=GeneID:1100427;Name=2SCK36.09c;gbkey=Gene;gene=2SCK36.09c;gene_biotype=protein_coding;gene_synonym=2SCK36.09c;locus_tag=SCO4986
NC_003888.3	RefSeq	CDS	5424037	5425647	.	-	0	ID=cds4938;Parent=gene5038;Dbxref=Genbank:NP_629138.1,GeneID:1100427;Name=NP_629138.1;Note=2SCK36.09c%2C probable D-aminoacylase%2C len: 536 aa%3B similar to SW:NDAD_ALCXX (EMBL:S80683) Alcaligenes xylosoxydans D-aminoacylase (EC 3.5.1.81) Dan%2C 483 aa%3B fasta scores: opt: 370 Z-score: 413.6 bits: 86.1 E(): 2e-15%3B 33.647%25 identity in 532 aa overlap;gbkey=CDS;gene=2SCK36.09c;product=D-aminoacylase;protein_id=NP_629138.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5425656	5425661	.	-	.	ID=id6380;gbkey=RBS
NC_003888.3	RefSeq	gene	5425676	5426977	.	-	.	ID=gene5039;Dbxref=GeneID:1100428;Name=2SCK36.10c;gbkey=Gene;gene=2SCK36.10c;gene_biotype=protein_coding;gene_synonym=2SCK36.10c;locus_tag=SCO4987
NC_003888.3	RefSeq	CDS	5425676	5426977	.	-	0	ID=cds4939;Parent=gene5039;Dbxref=Genbank:NP_629139.1,GeneID:1100428;Name=NP_629139.1;Note=2SCK36.10c%2C possible D-amino acid deaminase%2C len: 433 aa%3B similar to TR:Q45085 (EMBL:AF158699) Burkholderia cepacia D-serine deaminase Dsd%2C 432 aa%3B fasta scores: opt: 919 Z-score: 1026.2 bits: 199.0 E(): 1.5e-49%3B 41.259%25 identity in 429 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SCK36.10c;product=D-amino acid deaminase;protein_id=NP_629139.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5426711	5426734	.	-	.	ID=id6381;Dbxref=GeneID:1100428;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCK36.10c
NC_003888.3	RefSeq	ribosome_entry_site	5426982	5426986	.	-	.	ID=id6382;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5427098	5427102	.	+	.	ID=id6383;gbkey=RBS
NC_003888.3	RefSeq	gene	5427114	5428169	.	+	.	ID=gene5040;Dbxref=GeneID:1100429;Name=2SCK36.11;gbkey=Gene;gene=2SCK36.11;gene_biotype=protein_coding;gene_synonym=2SCK36.11;locus_tag=SCO4988
NC_003888.3	RefSeq	CDS	5427114	5428169	.	+	0	ID=cds4940;Parent=gene5040;Dbxref=Genbank:NP_629140.1,GeneID:1100429;Name=NP_629140.1;Note=2SCK36.11%2C probable carbohydrate kinase%2C len: 351 aa%3B similar to TR:Q9K6K5 (EMBL:AP001519) Bacillus halodurans 2-keto-3-deoxygluconate kinase (EC 2.7.1.45) KdgK or BH3724%2C 317 aa%3B fasta scores: opt: 578 Z-score: 638.8 bits: 126.5 E(): 5.7e-28%3B 38.835%25 identity in 309 aa overlap. Contains Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase;gbkey=CDS;gene=2SCK36.11;product=carbohydrate kinase;protein_id=NP_629140.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5427150	5428055	.	+	.	ID=id6384;Dbxref=GeneID:1100429;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 194.20%2C E-value 2.1e-54;gbkey=misc_feature;gene=2SCK36.11
NC_003888.3	RefSeq	ribosome_entry_site	5428150	5428156	.	+	.	ID=id6385;Dbxref=GeneID:1100429;gbkey=RBS;gene=2SCK36.11
NC_003888.3	RefSeq	gene	5428166	5428930	.	+	.	ID=gene5041;Dbxref=GeneID:1100430;Name=2SCK36.12;gbkey=Gene;gene=2SCK36.12;gene_biotype=protein_coding;gene_synonym=2SCK36.12;locus_tag=SCO4989
NC_003888.3	RefSeq	CDS	5428166	5428930	.	+	0	ID=cds4941;Parent=gene5041;Dbxref=Genbank:NP_629141.1,GeneID:1100430;Name=NP_629141.1;Note=2SCK36.12%2C probable IclR-family transcriptional regulatory protein%2C len: 254 aa%3B similar to SW:KDGR_ECOLI (EMBL:AE000277) Escherichia coli transcriptional regulator KdgR%2C 263 aa%3B fasta scores: opt: 420 Z-score: 488.7 bits: 98.0 E(): 1.3e-19%3B 30.992%25 identity in 242 aa overlap. Contains Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator and possible helix-turn-helix motif at residues 20..41 (+3.12 SD);gbkey=CDS;gene=2SCK36.12;product=IclR family transcriptional regulator;protein_id=NP_629141.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5428334	5428891	.	+	.	ID=id6386;Dbxref=GeneID:1100430;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 203.80%2C E-value 2.5e-57;gbkey=misc_feature;gene=2SCK36.12
NC_003888.3	RefSeq	ribosome_entry_site	5428913	5428917	.	+	.	ID=id6387;Dbxref=GeneID:1100430;gbkey=RBS;gene=2SCK36.12
NC_003888.3	RefSeq	gene	5428927	5429337	.	+	.	ID=gene5042;Dbxref=GeneID:1100431;Name=2SCK36.13;gbkey=Gene;gene=2SCK36.13;gene_biotype=protein_coding;gene_synonym=2SCK36.13;locus_tag=SCO4990
NC_003888.3	RefSeq	CDS	5428927	5429337	.	+	0	ID=cds4942;Parent=gene5042;Dbxref=Genbank:NP_629142.1,GeneID:1100431;Name=NP_629142.1;Note=2SCK36.13%2C conserved hypothetical protein%2C len: 136 aa%3B similar to SW:YABJ_BACSU (EMBL:D26185) Bacillus subtilis regulator of purine biosynthesis YabJ%2C 124 aa%3B fasta scores: opt: 239 Z-score: 301.4 bits: 61.4 E(): 3.5e-09%3B 36.641%25 identity in 131 aa overlap. Contains Pfam match to entry PF01042 UPF0076%2C YjgF family;gbkey=CDS;gene=2SCK36.13;product=hypothetical protein;protein_id=NP_629142.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5428957	5429331	.	+	.	ID=id6388;Dbxref=GeneID:1100431;Note=Pfam match to entry PF01042 UPF0076%2C YjgF family%2C score 98.90%2C E-value 1e-25;gbkey=misc_feature;gene=2SCK36.13
NC_003888.3	RefSeq	gene	5429458	5430936	.	+	.	ID=gene5043;Dbxref=GeneID:1100432;Name=2SCK36.14;gbkey=Gene;gene=2SCK36.14;gene_biotype=protein_coding;gene_synonym=2SCK36.14;locus_tag=SCO4991
NC_003888.3	RefSeq	CDS	5429458	5430936	.	+	0	ID=cds4943;Parent=gene5043;Dbxref=Genbank:NP_629143.1,GeneID:1100432;Name=NP_629143.1;Note=2SCK36.14%2C probable sugar transport integral membrane protein%2C len: 492 aa%3B similar to SW:GNTP_BACSU (EMBL:J02584) Bacillus subtilis gluconate permease GntP%2C 448 aa%3B fasta scores: opt: 988 Z-score: 1028.7 bits: 199.7 E(): 1.1e-49%3B 39.186%25 identity in 467 aa overlap. Contains Pfam match to entry PF02447 GntP_permease%2C GntP family permease and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK36.14;product=sugar transport integral membrane protein;protein_id=NP_629143.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5429542	5430930	.	+	.	ID=id6389;Dbxref=GeneID:1100432;Note=Pfam match to entry PF02447 GntP_permease%2C GntP family permease%2C score 514.40%2C E-value 8.3e-151;gbkey=misc_feature;gene=2SCK36.14
NC_003888.3	RefSeq	sequence_feature	5429950	5429973	.	+	.	ID=id6390;Dbxref=GeneID:1100432;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SCK36.14
NC_003888.3	RefSeq	gene	5431032	5431676	.	+	.	ID=gene5044;Dbxref=GeneID:1100433;Name=2SCK36.15;gbkey=Gene;gene=2SCK36.15;gene_biotype=protein_coding;gene_synonym=2SCK36.15;locus_tag=SCO4992
NC_003888.3	RefSeq	CDS	5431032	5431676	.	+	0	ID=cds4944;Parent=gene5044;Dbxref=Genbank:NP_629144.1,GeneID:1100433;Name=NP_629144.1;Note=2SCK36.15%2C unknown%2C len: 214 aa. High content of alanine and glutamic amino acid residues in C-terminal region;gbkey=CDS;gene=2SCK36.15;product=hypothetical protein;protein_id=NP_629144.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5431551	5431673	.	+	.	ID=id6391;Dbxref=GeneID:1100433;Note=high concentration of alanine and glutamic amino acid residues;gbkey=misc_feature;gene=2SCK36.15
NC_003888.3	RefSeq	gene	5431696	5433066	.	+	.	ID=gene5045;Dbxref=GeneID:1100434;Name=2SCK36.16;gbkey=Gene;gene=2SCK36.16;gene_biotype=protein_coding;gene_synonym=2SCK36.16;locus_tag=SCO4993
NC_003888.3	RefSeq	CDS	5431696	5433066	.	+	0	ID=cds4945;Parent=gene5045;Dbxref=Genbank:NP_629145.1,GeneID:1100434;Name=NP_629145.1;Note=2SCK36.16%2C possible metal ion transport protein%2C len: 456 aa%3B similar to SW:MNTH_SALTY (EMBL:AF161317) Salmonella typhimurium manganese transport protein MntH%2C 413 aa%3B fasta scores: opt: 241 Z-score: 273.7 bits: 59.8 E(): 1.2e-07%3B 20.824%25 identity in 437 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SCK36.16;product=metal ion transport protein;protein_id=NP_629145.1;transl_table=11
NC_003888.3	RefSeq	gene	5433210	5434163	.	+	.	ID=gene5046;Dbxref=GeneID:1100435;Name=2SCK36.17;gbkey=Gene;gene=2SCK36.17;gene_biotype=protein_coding;gene_synonym=2SCK36.17;locus_tag=SCO4994
NC_003888.3	RefSeq	CDS	5433210	5434163	.	+	0	ID=cds4946;Parent=gene5046;Dbxref=Genbank:NP_629146.1,GeneID:1100435;Name=NP_629146.1;Note=2SCK36.17%2C unknown%2C len: 317 aa;gbkey=CDS;gene=2SCK36.17;product=hypothetical protein;protein_id=NP_629146.1;transl_table=11
NC_003888.3	RefSeq	gene	5434218	5435480	.	-	.	ID=gene5047;Dbxref=GeneID:1100436;Name=2SCK36.18c;gbkey=Gene;gene=2SCK36.18c;gene_biotype=protein_coding;gene_synonym=2SCK36.18c;locus_tag=SCO4995
NC_003888.3	RefSeq	CDS	5434218	5435480	.	-	0	ID=cds4947;Parent=gene5047;Dbxref=Genbank:NP_629147.1,GeneID:1100436;Name=NP_629147.1;Note=2SCK36.18c%2C membrane protein%2C len: 420 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SCK36.18c;product=hypothetical protein;protein_id=NP_629147.1;transl_table=11
NC_003888.3	RefSeq	gene	5435560	5436069	.	-	.	ID=gene5048;Dbxref=GeneID:1100437;Name=2SCK36.19c;gbkey=Gene;gene=2SCK36.19c;gene_biotype=protein_coding;gene_synonym=2SCK36.19c;locus_tag=SCO4996
NC_003888.3	RefSeq	CDS	5435560	5436069	.	-	0	ID=cds4948;Parent=gene5048;Dbxref=Genbank:NP_629148.1,GeneID:1100437;Name=NP_629148.1;Note=2SCK36.19c%2C probable RNA polymerase ECF sigma factor%2C len: 169 aa%3B similar to SW:RPOE_STRCO (EMBL:L29636) Streptomyces coelicolor RNA polymerase sigma-E factor SigE or SCE94.07%2C 176 aa%3B fasta scores: opt: 278 Z-score: 347.2 bits: 70.7 E(): 9.9e-12%3B 36.527%25 identity in 167 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=2SCK36.19c;product=RNA polymerase ECF sigma factor;protein_id=NP_629148.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5435836	5436003	.	-	.	ID=id6392;Dbxref=GeneID:1100437;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 14.20%2C E-value 0.0028;gbkey=misc_feature;gene=2SCK36.19c
NC_003888.3	RefSeq	gene	5436168	5436359	.	-	.	ID=gene5049;Dbxref=GeneID:1100438;Name=2SCK36.20c;gbkey=Gene;gene=2SCK36.20c;gene_biotype=protein_coding;gene_synonym=2SCK36.20c;locus_tag=SCO4997
NC_003888.3	RefSeq	CDS	5436168	5436359	.	-	0	ID=cds4949;Parent=gene5049;Dbxref=Genbank:NP_629149.1,GeneID:1100438;Name=NP_629149.1;Note=2SCK36.20c%2C hypothetical protein%2C len: 63 aa%3B similar to TR:Q9F3E1 (EMBL:AL450289) Streptomyces coelicolor AbaA-like protein SC2H2.14%2C 89 aa%3B fasta scores: opt: 96 Z-score: 150.9 bits: 31.9 E(): 0.86%3B 32.787%25 identity in 61 aa overlap;gbkey=CDS;gene=2SCK36.20c;product=hypothetical protein;protein_id=NP_629149.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5436367	5436371	.	-	.	ID=id6393;gbkey=RBS
NC_003888.3	RefSeq	gene	5436371	5437222	.	-	.	ID=gene5050;Dbxref=GeneID:1100439;Name=2SCK36.21c;gbkey=Gene;gene=2SCK36.21c;gene_biotype=protein_coding;gene_synonym=2SCK36.21c;locus_tag=SCO4998
NC_003888.3	RefSeq	CDS	5436371	5437222	.	-	0	ID=cds4950;Parent=gene5050;Dbxref=Genbank:NP_629150.1,GeneID:1100439;Name=NP_629150.1;Note=2SCK36.21c%2C hypothetical protein%2C len: 283 aa%3B similar to TR:Q9XD96 (EMBL:AF106004) Streptomyces coelicolor hypothetical 31.8 kDa protein ORF3%2C 283 aa%3B fasta scores: opt: 815 Z-score: 959.3 bits: 185.4 E(): 8e-46%3B 45.230%25 identity in 283 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix;gbkey=CDS;gene=2SCK36.21c;product=hypothetical protein;protein_id=NP_629150.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5437007	5437171	.	-	.	ID=id6394;Dbxref=GeneID:1100439;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 36.30%2C E-value 6.9e-07;gbkey=misc_feature;gene=2SCK36.21c
NC_003888.3	RefSeq	ribosome_entry_site	5437228	5437232	.	-	.	ID=id6395;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5437425	5437429	.	+	.	ID=id6396;gbkey=RBS
NC_003888.3	RefSeq	gene	5437435	5437923	.	+	.	ID=gene5051;Dbxref=GeneID:1100440;Name=SCK15.01;gbkey=Gene;gene=SCK15.01;gene_biotype=protein_coding;gene_synonym=SCK15.01;locus_tag=SCO4999
NC_003888.3	RefSeq	CDS	5437435	5437923	.	+	0	ID=cds4951;Parent=gene5051;Dbxref=Genbank:NP_629151.1,GeneID:1100440;Name=NP_629151.1;Note=SCK15.01%2C hypothetical protein%2C len: 162 aa%3B similar to TR:CAB7697 (EMBL:AL159178) Streptomyces coelicolor hypothetical 16.8 kD protein SCH22A.02c%2C 160 aa%3B fasta scores: opt: 133 z-score: 165.9 E(): 0.09%3B 28.9%25 identity in 142 aa overlap;gbkey=CDS;gene=SCK15.01;product=hypothetical protein;protein_id=NP_629151.1;transl_table=11
NC_003888.3	RefSeq	gene	5438306	5438614	.	+	.	ID=gene5052;Dbxref=GeneID:1100441;Name=SCK15.02;gbkey=Gene;gene=SCK15.02;gene_biotype=protein_coding;gene_synonym=SCK15.02;locus_tag=SCO5000
NC_003888.3	RefSeq	CDS	5438306	5438614	.	+	0	ID=cds4952;Parent=gene5052;Dbxref=Genbank:NP_629152.1,GeneID:1100441;Name=NP_629152.1;Note=SCK15.02%2C conserved hypothetical protein%2C len: 102 aa%3B similar to TR:CAB77311 (EMBL:AL160312) Streptomyces coelicolor hypothetical 11.3 kD protein SCD35.27c%2C 101 aa%3B fasta scores: opt: 465 z-score: 578.9 E(): 9e-25%3B 72.6%25 identity in 95 aa overlap;gbkey=CDS;gene=SCK15.02;product=hypothetical protein;protein_id=NP_629152.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5438333	5438336	.	+	.	ID=id6397;Dbxref=GeneID:1100441;gbkey=RBS;gene=SCK15.02
NC_003888.3	RefSeq	ribosome_entry_site	5438603	5438607	.	+	.	ID=id6398;Dbxref=GeneID:1100441;gbkey=RBS;gene=SCK15.02
NC_003888.3	RefSeq	gene	5438611	5439252	.	+	.	ID=gene5053;Dbxref=GeneID:1100442;Name=SCK15.03;gbkey=Gene;gene=SCK15.03;gene_biotype=protein_coding;gene_synonym=SCK15.03;locus_tag=SCO5001
NC_003888.3	RefSeq	CDS	5438611	5439252	.	+	0	ID=cds4953;Parent=gene5053;Dbxref=Genbank:NP_629153.1,GeneID:1100442;Name=NP_629153.1;Note=SCK15.03%2C possible integral membrane protein%2C len: 213 aa%3B similar to TR:CAB77310 (EMBL:AL160312) Streptomyces coelicolor  integral membrane protein SCD35.26%2C 198 aa%3B fasta scores: opt: 349 z-score: 424.5 E(): 3.6e-16%3B 37.4%25 identity in 182 aa overlap. Contains possible hydrophobic membrane spanning regions at C-terminal domain;gbkey=CDS;gene=SCK15.03;product=hypothetical protein;protein_id=NP_629153.1;transl_table=11
NC_003888.3	RefSeq	gene	5439185	5439835	.	-	.	ID=gene5054;Dbxref=GeneID:1100443;Name=SCK15.04c;gbkey=Gene;gene=SCK15.04c;gene_biotype=protein_coding;gene_synonym=SCK15.04c;locus_tag=SCO5002
NC_003888.3	RefSeq	CDS	5439185	5439835	.	-	0	ID=cds4954;Parent=gene5054;Dbxref=Genbank:NP_629154.1,GeneID:1100443;Name=NP_629154.1;Note=SCK15.04c%2C conserved hypothetical protein%2C len: 216 aa%3B similar to TR:CAB77308 (EMBL:AL160312) Streptomyces coelicolor hypothetical 26.0 kD protein SCD35.24c%2C 241 aa%3B fasta scores: opt: 613 z-score: 732.4 E(): 0%3B 52.8%25 identity in 197 aa overlap;gbkey=CDS;gene=SCK15.04c;product=hypothetical protein;protein_id=NP_629154.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5439862	5441812	.	-	.	ID=id6399;Note=previously sequenced fragment EMBL:AB017008 Streptomyces coelicolor gene for ChiA%2C partial cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5439963	5441678	.	-	.	ID=gene5055;Dbxref=GeneID:1100444;Name=chiA;gbkey=Gene;gene=chiA;gene_biotype=protein_coding;gene_synonym=chiA,SCK15.05c;locus_tag=SCO5003
NC_003888.3	RefSeq	CDS	5439963	5441678	.	-	0	ID=cds4955;Parent=gene5055;Dbxref=Genbank:NP_629155.1,GeneID:1100444;Name=NP_629155.1;Note=SCK15.05c%2C chiA%2C chitinase A precursor%2C len: 571 aa%3B identical to previously sequenced TR:Q9Z9M9 (EMBL:AB017008) Streptomyces coelicolor chitinase A precursor ChiA%2C 571 aa and to TR:Q59924 (EMBL:D13775) Streptomyces lividans chitinase A precursor (EC 3.2.1.14) ChiA%2C 571 aa. Contains Pfam match to entry PF02018 CBD_6%2C Cellulose binding domain%2C PF00041 fn3%2C Fibronectin type III domain%2C PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18 and matches to Prosite entries PS00678 Trp-Asp (WD) repeats signature and PS01095 Chitinases family 18 active site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=chiA;product=chitinase A;protein_id=NP_629155.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5440488	5440514	.	-	.	ID=id6400;Dbxref=GeneID:1100444;Note=PS01095 Chitinases family 18 active site;gbkey=misc_feature;gene=chiA
NC_003888.3	RefSeq	sequence_feature	5440494	5440580	.	-	.	ID=id6401;Dbxref=GeneID:1100444;Note=Pfam match to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18%2C score 19.40%2C E-value 3.7e-05;gbkey=misc_feature;gene=chiA
NC_003888.3	RefSeq	sequence_feature	5440902	5441123	.	-	.	ID=id6402;Dbxref=GeneID:1100444;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 64.00%2C E-value 3.1e-15;gbkey=misc_feature;gene=chiA
NC_003888.3	RefSeq	sequence_feature	5441055	5441099	.	-	.	ID=id6403;Dbxref=GeneID:1100444;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=chiA
NC_003888.3	RefSeq	sequence_feature	5441166	5441564	.	-	.	ID=id6404;Dbxref=GeneID:1100444;Note=Pfam match to entry PF02018 CBD_6%2C Cellulose binding domain%2C score 101.70%2C E-value 1.5e-26;gbkey=misc_feature;gene=chiA
NC_003888.3	RefSeq	gene	5441997	5442938	.	+	.	ID=gene5056;Dbxref=GeneID:1100445;Name=SCK15.06;gbkey=Gene;gene=SCK15.06;gene_biotype=protein_coding;gene_synonym=SCK15.06;locus_tag=SCO5004
NC_003888.3	RefSeq	CDS	5441997	5442938	.	+	0	ID=cds4956;Parent=gene5056;Dbxref=Genbank:NP_629156.1,GeneID:1100445;Name=NP_629156.1;Note=SCK15.06%2C unknown%2C len: 313 aa. Contains hydrohilic C-terminall region;gbkey=CDS;gene=SCK15.06;product=hypothetical protein;protein_id=NP_629156.1;transl_table=11
NC_003888.3	RefSeq	gene	5443213	5443824	.	+	.	ID=gene5057;Dbxref=GeneID:1100446;Name=SCK15.07;gbkey=Gene;gene=SCK15.07;gene_biotype=protein_coding;gene_synonym=SCK15.07;locus_tag=SCO5005
NC_003888.3	RefSeq	CDS	5443213	5443824	.	+	0	ID=cds4957;Parent=gene5057;Dbxref=Genbank:NP_629157.1,GeneID:1100446;Name=NP_629157.1;Note=SCK15.07%2C unknown%2C len: 203 aa;gbkey=CDS;gene=SCK15.07;product=hypothetical protein;protein_id=NP_629157.1;transl_table=11
NC_003888.3	RefSeq	gene	5443832	5445088	.	+	.	ID=gene5058;Dbxref=GeneID:1100447;Name=minD1;gbkey=Gene;gene=minD1;gene_biotype=protein_coding;gene_synonym=minD1,SCK15.08;locus_tag=SCO5006
NC_003888.3	RefSeq	CDS	5443832	5445088	.	+	0	ID=cds4958;Parent=gene5058;Dbxref=Genbank:NP_629158.1,GeneID:1100447;Name=NP_629158.1;Note=SCK15.08%2C minD1%2C possible septum site-determining protein%2C len: 418 aa%3B N-terminal domain similar to TR:Q9RZD9 (EMBL:AE001862) Deinococcus radiodurans DNA-binding response regulator DRA0010%2C 211 aa%3B blastp scores: Score %3D 103 (36.3 bits)%2C Expect %3D 0.0045%2C Identities %3D 50/194 (25%25)%2C Positives %3D 85/194 (43%25) and C-terminal domain highly similar to TR:Q9ZF15 (EMBL:AJ005576) Streptomyces griseus septum site-determining protein MinD protein%2C 396 aa%3B fasta scores: opt: 1230 z-score: 1302.8 E(): 0%3B 70.5%25 identity in 281 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00991 ParA%2C ParA family ATPase;gbkey=CDS;gene=minD1;product=septum site-determining protein;protein_id=NP_629158.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5443838	5444200	.	+	.	ID=id6405;Dbxref=GeneID:1100447;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 1.30%2C E-value 0.0034;gbkey=misc_feature;gene=minD1
NC_003888.3	RefSeq	sequence_feature	5444504	5444827	.	+	.	ID=id6406;Dbxref=GeneID:1100447;Note=Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 47.60%2C E-value 2.7e-10;gbkey=misc_feature;gene=minD1
NC_003888.3	RefSeq	gene	5445085	5445480	.	+	.	ID=gene5059;Dbxref=GeneID:1100448;Name=minD2;gbkey=Gene;gene=minD2;gene_biotype=protein_coding;gene_synonym=minD2,SCK15.09;locus_tag=SCO5007
NC_003888.3	RefSeq	CDS	5445085	5445480	.	+	0	ID=cds4959;Parent=gene5059;Dbxref=Genbank:NP_629159.1,GeneID:1100448;Name=NP_629159.1;Note=SCK15.09%2C minD2%2C possible septum site-determining protein%2C len: 131 aa%3B similar to C-terminal domain of TR:Q9ZF15 (EMBL:AJ005576) Streptomyces griseus septum site-determining protein MinD protein%2C 396 aa%3B fasta scores: opt: 360 z-score: 444.6 E(): 2.7e-17%3B 47.3%25 identity in 129 aa overlap and to Streptomyces coelicolor septum site-determining protein minD3 SCK15.10%2C 131 aa%3B fasta scores: opt: 177 z-score: 196.8 E(): 2.1e-05%3B 35.8%25 identity in 109 aa overlap. Contains possible hydrophobic membrane spanning region and TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=minD2;product=septum site-determining protein;protein_id=NP_629159.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5445094	5445096	.	+	.	ID=id6407;Dbxref=GeneID:1100448;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=minD2
NC_003888.3	RefSeq	repeat_region	5445109	5445147	.	+	.	ID=id6408;Dbxref=GeneID:1100448;Note=2x degenerate repeat: RA(G/R)D(R/G)GQV(A/T)IE(Y/F)L;gbkey=repeat_region;gene=minD2
NC_003888.3	RefSeq	ribosome_entry_site	5445468	5445473	.	+	.	ID=id6409;Dbxref=GeneID:1100448;gbkey=RBS;gene=minD2
NC_003888.3	RefSeq	gene	5445482	5445877	.	+	.	ID=gene5060;Dbxref=GeneID:1100449;Name=minD3;gbkey=Gene;gene=minD3;gene_biotype=protein_coding;gene_synonym=minD3,SCK15.10;locus_tag=SCO5008
NC_003888.3	RefSeq	CDS	5445482	5445877	.	+	0	ID=cds4960;Parent=gene5060;Dbxref=Genbank:NP_629160.1,GeneID:1100449;Name=NP_629160.1;Note=SCK15.10%2C minD3%2C possible septum site-determining protein%2C len: 131 aa%3B similar to TR:Q9ZF15 (EMBL:AJ005576) Streptomyces griseus septum site-determining protein MinD protein%2C 396 aa%3B fasta scores: opt: 180 z-score: 224.4 E(): 5e-05%3B 37.7%25 identity in 122 aa overlap and to Streptomyces coelicolor septum site-determining protein minD2%2C 131 aa%3B fasta scores: opt: 177 z-score: 189.4 E(): 5.4e-05%3B 36.4%25 identity in 107 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=minD3;product=septum site-determining protein;protein_id=NP_629160.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5445536	5445574	.	+	.	ID=id6410;Dbxref=GeneID:1100449;Note=2x degenerate repeat: RA(G/R)D(R/G)GQV(A/T)IE(Y/F)L;gbkey=repeat_region;gene=minD3
NC_003888.3	RefSeq	ribosome_entry_site	5445881	5445885	.	+	.	ID=id6411;gbkey=RBS
NC_003888.3	RefSeq	gene	5445896	5447233	.	+	.	ID=gene5061;Dbxref=GeneID:1100450;Name=SCK15.11;gbkey=Gene;gene=SCK15.11;gene_biotype=protein_coding;gene_synonym=SCK15.11;locus_tag=SCO5009
NC_003888.3	RefSeq	CDS	5445896	5447233	.	+	0	ID=cds4961;Parent=gene5061;Dbxref=Genbank:NP_629161.1,GeneID:1100450;Name=NP_629161.1;Note=SCK15.11%2C probable secretory protein%2C len: 445 aa%3B similar to TR:P94647 (EMBL:U77780) Chlorobium limicola secretory protein kinase Kbh%2C 474 aa%3B fasta scores: opt: 1192 z-score: 1311.8 E(): 0%3B 47.7%25 identity in 396 aa overlap%2C to SW:TRBB_AGRT6 (EMBL:U43675) Agrobacterium tumefaciens conjugal transfer protein TrbB%2C 323 aa%3B fasta scores: opt: 512 z-score: 568.9 E(): 3.2e-24%3B 30.4%25 identity in 326 aa overlap and to TR:Q9X921 (EMBL:AL035636) Streptomyces coelicolor secretory protein SCH5.19c%2C 523 aa%3B fasta scores: opt: 878 z-score: 847.4 E(): 0%3B 40.3%25 identity in 365 aa overlap. Contains Pfam match to entry PF00437 GSPII_E%2C Bacterial type II secretion system protein and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCK15.11;product=secretory protein;protein_id=NP_629161.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5446532	5446891	.	+	.	ID=id6412;Dbxref=GeneID:1100450;Note=Pfam match to entry PF00437 GSPII_E%2C Bacterial type II secretion system protein%2C score 64.70%2C E-value 1.7e-18;gbkey=misc_feature;gene=SCK15.11
NC_003888.3	RefSeq	sequence_feature	5446544	5446567	.	+	.	ID=id6413;Dbxref=GeneID:1100450;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCK15.11
NC_003888.3	RefSeq	gene	5447243	5448193	.	+	.	ID=gene5062;Dbxref=GeneID:1100451;Name=SCK15.12;gbkey=Gene;gene=SCK15.12;gene_biotype=protein_coding;gene_synonym=SCK15.12;locus_tag=SCO5010
NC_003888.3	RefSeq	CDS	5447243	5448193	.	+	0	ID=cds4962;Parent=gene5062;Dbxref=Genbank:NP_629162.1,GeneID:1100451;Name=NP_629162.1;Note=SCK15.12%2C possible integral membrane protein%2C len: 316 aa%3B similar to TR:AAF40196 (EMBL:AF229646) Caulobacter crescentus hypothetical 34.6 kD protein%2C 325 aa%3B fasta scores: opt: 287 z-score: 328.2 E(): 8.2e-11%3B 21.9%25 identity in 315 aa overlap. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK15.12;product=hypothetical protein;protein_id=NP_629162.1;transl_table=11
NC_003888.3	RefSeq	gene	5448213	5449115	.	+	.	ID=gene5063;Dbxref=GeneID:1100452;Name=SCK15.13;gbkey=Gene;gene=SCK15.13;gene_biotype=protein_coding;gene_synonym=SCK15.13;locus_tag=SCO5011
NC_003888.3	RefSeq	CDS	5448213	5449115	.	+	0	ID=cds4963;Parent=gene5063;Dbxref=Genbank:NP_629163.1,GeneID:1100452;Name=NP_629163.1;Note=SCK15.13%2C possible integral membrane protein%2C len: 300 aa%3B similar to TR:O27061 (EMBL:AE000871) Methanobacterium thermoautotrophicum conserved protein MTH980%2C 313 aa%3B fasta scores: opt: 235 z-score: 285.2 E(): 2e-08%3B 27.7%25 identity in 238 aa overlap. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK15.13;product=hypothetical protein;protein_id=NP_629163.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5449365	5449368	.	+	.	ID=id6414;gbkey=RBS
NC_003888.3	RefSeq	gene	5449378	5449575	.	+	.	ID=gene5064;Dbxref=GeneID:1100453;Name=SCK15.14;gbkey=Gene;gene=SCK15.14;gene_biotype=protein_coding;gene_synonym=SCK15.14;locus_tag=SCO5012
NC_003888.3	RefSeq	CDS	5449378	5449575	.	+	0	ID=cds4964;Parent=gene5064;Dbxref=Genbank:NP_629164.1,GeneID:1100453;Name=NP_629164.1;Note=SCK15.14%2C possible integral membrane protein%2C len: 65 aa%3B similar to some other integral membrane proteins%2C e.g. TR:AAF40189 (EMBL:AF229646) Caulobacter crescentus PilA%2C 59 aa%3B fasta scores: opt: 84 z-score: 142.8 E(): 1.8%3B 36.2%25 identity in 47 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCK15.14;product=hypothetical protein;protein_id=NP_629164.1;transl_table=11
NC_003888.3	RefSeq	gene	5449578	5450174	.	+	.	ID=gene5065;Dbxref=GeneID:1100454;Name=SCK15.15;gbkey=Gene;gene=SCK15.15;gene_biotype=protein_coding;gene_synonym=SCK15.15;locus_tag=SCO5013
NC_003888.3	RefSeq	CDS	5449578	5450174	.	+	0	ID=cds4965;Parent=gene5065;Dbxref=Genbank:NP_629165.1,GeneID:1100454;Name=NP_629165.1;Note=SCK15.15%2C possible hypothetical protein%2C len: 198 aa. Contains possible N-terminal region signal peptide sequence. High content in alanine amino acid residues;gbkey=CDS;gene=SCK15.15;product=hypothetical protein;protein_id=NP_629165.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5450196	5450199	.	+	.	ID=id6415;gbkey=RBS
NC_003888.3	RefSeq	gene	5450207	5450785	.	+	.	ID=gene5066;Dbxref=GeneID:1100455;Name=SCK15.16;gbkey=Gene;gene=SCK15.16;gene_biotype=protein_coding;gene_synonym=SCK15.16;locus_tag=SCO5014
NC_003888.3	RefSeq	CDS	5450207	5450785	.	+	0	ID=cds4966;Parent=gene5066;Dbxref=Genbank:NP_629166.1,GeneID:1100455;Name=NP_629166.1;Note=SCK15.16%2C possible hypothetical protein%2C len: 192 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCK15.16;product=hypothetical protein;protein_id=NP_629166.1;transl_table=11
NC_003888.3	RefSeq	gene	5450794	5451405	.	+	.	ID=gene5067;Dbxref=GeneID:1100456;Name=SCK15.17;gbkey=Gene;gene=SCK15.17;gene_biotype=protein_coding;gene_synonym=SCK15.17;locus_tag=SCO5015
NC_003888.3	RefSeq	CDS	5450794	5451405	.	+	0	ID=cds4967;Parent=gene5067;Dbxref=Genbank:NP_629167.1,GeneID:1100456;Name=NP_629167.1;Note=SCK15.17%2C possible hypothetical protein%2C len: 203 aa%3B similar to many other membrane proteins%2C e.g. TR:Q9S6B8 (EMBL:AF115336) Pseudomonas fluorescens major outer membrane protein OprF%2C 343 aa%3B fasta scores: opt: 247 z-score: 285.4 E(): 2e-08%3B 34.3%25 identity in 181 aa overlap. Contains Pfam match to entry PF00691 OmpA%2C OmpA family and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCK15.17;product=hypothetical protein;protein_id=NP_629167.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5451079	5451369	.	+	.	ID=id6416;Dbxref=GeneID:1100456;Note=Pfam match to entry PF00691 OmpA%2C OmpA family%2C score 77.70%2C E-value 2.4e-19;gbkey=misc_feature;gene=SCK15.17
NC_003888.3	RefSeq	gene	5451503	5452318	.	-	.	ID=gene5068;Dbxref=GeneID:1100457;Name=SCK15.18c;gbkey=Gene;gene=SCK15.18c;gene_biotype=protein_coding;gene_synonym=SCK15.18c;locus_tag=SCO5016
NC_003888.3	RefSeq	CDS	5451503	5452318	.	-	0	ID=cds4968;Parent=gene5068;Dbxref=Genbank:NP_629168.1,GeneID:1100457;Name=NP_629168.1;Note=SCK15.18c%2C possible hypothetical protein%2C len: 271 aa. Contains possible N-terminal region signal peptide sequence and a repeat region: 7x AS at N-terminal domain;gbkey=CDS;gene=SCK15.18c;product=hypothetical protein;protein_id=NP_629168.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5452094	5452135	.	-	.	ID=id6417;Dbxref=GeneID:1100457;Note=conserved repeat region translated in CDS SCK15.18c;gbkey=repeat_region;gene=SCK15.18c
NC_003888.3	RefSeq	gene	5452526	5453623	.	+	.	ID=gene5069;Dbxref=GeneID:1100458;Name=SCK15.19;gbkey=Gene;gene=SCK15.19;gene_biotype=protein_coding;gene_synonym=SCK15.19;locus_tag=SCO5017
NC_003888.3	RefSeq	CDS	5452526	5453623	.	+	0	ID=cds4969;Parent=gene5069;Dbxref=Genbank:NP_629169.1,GeneID:1100458;Name=NP_629169.1;Note=SCK15.19%2C possible araC family regulatory protein%2C len: 365 aa%3B similar to TR:Q54308 (EMBL:X86780) Streptomyces hygroscopicus helix-turn-helix DNA-binding protein%2C 330 aa%3B fasta scores: opt: 247 z-score: 294.6 E(): 6.1e-09%3B 28.6%25 identity in 346 aa overlap. Contains fam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and match to Prosite entry PS00041 Bacterial regulatory proteins%2C araC family signature. Contains also a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCK15.19;product=AraC family transcription regulator;protein_id=NP_629169.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5453222	5453224	.	+	.	ID=id6418;Dbxref=GeneID:1100458;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCK15.19
NC_003888.3	RefSeq	sequence_feature	5453297	5453563	.	+	.	ID=id6419;Dbxref=GeneID:1100458;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 70.90%2C E-value 2.7e-17;gbkey=misc_feature;gene=SCK15.19
NC_003888.3	RefSeq	sequence_feature	5453405	5453542	.	+	.	ID=id6420;Dbxref=GeneID:1100458;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SCK15.19
NC_003888.3	RefSeq	gene	5453774	5453983	.	+	.	ID=gene5070;Dbxref=GeneID:1100459;Name=SCK15.20;gbkey=Gene;gene=SCK15.20;gene_biotype=protein_coding;gene_synonym=SCK15.20;locus_tag=SCO5018
NC_003888.3	RefSeq	CDS	5453774	5453983	.	+	0	ID=cds4970;Parent=gene5070;Dbxref=Genbank:NP_629170.1,GeneID:1100459;Name=NP_629170.1;Note=SCK15.20%2C possible integral membrane protein%2C len: 69 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK15.20;product=hypothetical protein;protein_id=NP_629170.1;transl_table=11
NC_003888.3	RefSeq	gene	5453993	5454598	.	-	.	ID=gene5071;Dbxref=GeneID:1100460;Name=SCK15.21c;gbkey=Gene;gene=SCK15.21c;gene_biotype=protein_coding;gene_synonym=SCK15.21c;locus_tag=SCO5019
NC_003888.3	RefSeq	CDS	5453993	5454598	.	-	0	ID=cds4971;Parent=gene5071;Dbxref=Genbank:NP_629171.1,GeneID:1100460;Name=NP_629171.1;Note=SCK15.21c%2C possible hypothetical protein%2C len: 201 aa%3B similar to TR:Q9UZM5 (EMBL:AJ248286%3B) Pyrococcus abyssi hypothetical 13.4 kD protein%2C 117 aa%3B fasta scores: opt: 167 z-score: 206.8 E(): 0.00048%3B 31.0%25 identity in 100 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCK15.21c;product=hypothetical protein;protein_id=NP_629171.1;transl_table=11
NC_003888.3	RefSeq	gene	5454591	5455127	.	+	.	ID=gene5072;Dbxref=GeneID:1100461;Name=SCK15.22;gbkey=Gene;gene=SCK15.22;gene_biotype=protein_coding;gene_synonym=SCK15.22;locus_tag=SCO5020
NC_003888.3	RefSeq	CDS	5454591	5455127	.	+	0	ID=cds4972;Parent=gene5072;Dbxref=Genbank:NP_629172.1,GeneID:1100461;Name=NP_629172.1;Note=SCK15.22%2C hypothetical protein%2C len: 178 aa%3B similar to C-terminal region of TR:Q9KY81 (EMBL:AL356813) Streptomyces coelicolor lipoprotein SCK15.23%2C 221 aa%3B fasta scores: opt: 444 Z-score: 519.8 E(): 2.5e-21%3B 39.080%25 identity in 174 aa overlap;gbkey=CDS;gene=SCK15.22;product=hypothetical protein;protein_id=NP_629172.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5455305	5455308	.	+	.	ID=id6421;gbkey=RBS
NC_003888.3	RefSeq	gene	5455315	5455980	.	+	.	ID=gene5073;Dbxref=GeneID:1100462;Name=SCK15.23;gbkey=Gene;gene=SCK15.23;gene_biotype=protein_coding;gene_synonym=SCK15.23;locus_tag=SCO5021
NC_003888.3	RefSeq	CDS	5455315	5455980	.	+	0	ID=cds4973;Parent=gene5073;Dbxref=Genbank:NP_629173.1,GeneID:1100462;Name=NP_629173.1;Note=SCK15.23%2C possible lipoprotein%2C len: 221 aa%3B similar to Streptomyces coelicolor SCK15.24%2C 220 aa%3B fasta scores: opt: 736 z-score: 652.9 E(): 8.3e-31%3B 54.3%25 identity in 221 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCK15.23;product=lipoprotein;protein_id=NP_629173.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5455357	5455389	.	+	.	ID=id6422;Dbxref=GeneID:1100462;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCK15.23
NC_003888.3	RefSeq	ribosome_entry_site	5456210	5456214	.	+	.	ID=id6423;gbkey=RBS
NC_003888.3	RefSeq	gene	5456221	5456883	.	+	.	ID=gene5074;Dbxref=GeneID:1100463;Name=SCK15.24;gbkey=Gene;gene=SCK15.24;gene_biotype=protein_coding;gene_synonym=SCK15.24;locus_tag=SCO5022
NC_003888.3	RefSeq	CDS	5456221	5456883	.	+	0	ID=cds4974;Parent=gene5074;Dbxref=Genbank:NP_629174.1,GeneID:1100463;Name=NP_629174.1;Note=SCK15.24%2C possible lipoprotein%2C len: 220 aa%3B similar to Streptomyces coelicolor SCK15.23%2C 221 aa%3B fasta scores: opt: 736 z-score: 703.5 E(): 1.3e-33%3B 54.3%25 identity in 221 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCK15.24;product=lipoprotein;protein_id=NP_629174.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5456263	5456295	.	+	.	ID=id6424;Dbxref=GeneID:1100463;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCK15.24
NC_003888.3	RefSeq	gene	5456892	5457902	.	+	.	ID=gene5075;Dbxref=GeneID:1100464;Name=SCK15.25;gbkey=Gene;gene=SCK15.25;gene_biotype=protein_coding;gene_synonym=SCK15.25;locus_tag=SCO5023
NC_003888.3	RefSeq	CDS	5456892	5457902	.	+	0	ID=cds4975;Parent=gene5075;Dbxref=Genbank:NP_629175.1,GeneID:1100464;Name=NP_629175.1;Note=SCK15.25%2C possible hypothetical protein%2C len: 336 aa%3B similar to TR:CAB77312 (EMBL:AL160312) Streptomyces coelicolor hypothetical protein SCD35.28c%2C 361 aa%3B fasta scores: opt: 890 z-score: 972.2 E(): 0%3B 47.3%25 identity in 357 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCK15.25;product=hypothetical protein;protein_id=NP_629175.1;transl_table=11
NC_003888.3	RefSeq	gene	5458019	5458891	.	+	.	ID=gene5076;Dbxref=GeneID:1100465;Name=SCK15.26;gbkey=Gene;gene=SCK15.26;gene_biotype=protein_coding;gene_synonym=SCK15.26;locus_tag=SCO5024
NC_003888.3	RefSeq	CDS	5458019	5458891	.	+	0	ID=cds4976;Parent=gene5076;Dbxref=Genbank:NP_629176.1,GeneID:1100465;Name=NP_629176.1;Note=SCK15.26%2C possible oxidoreductase%2C len: 290 aa%3B similar to TR:Q9UXP0 (EMBL:AJ011519) Methanolobus tindarius F420-dependent N5%2CN10-methylene-tetrahydromethanopterin reductase%2C FfdA%2C 326 aa%3B fasta scores: opt: 323 z-score: 369.8 E(): 4e-13%3B 28.3%25 identity in 240 aa overlap;gbkey=CDS;gene=SCK15.26;product=oxidoreductase;protein_id=NP_629176.1;transl_table=11
NC_003888.3	RefSeq	gene	5458994	5459911	.	+	.	ID=gene5077;Dbxref=GeneID:1100466;Name=SCK15.27;gbkey=Gene;gene=SCK15.27;gene_biotype=protein_coding;gene_synonym=SCK15.27;locus_tag=SCO5025
NC_003888.3	RefSeq	CDS	5458994	5459911	.	+	0	ID=cds4977;Parent=gene5077;Dbxref=Genbank:NP_629177.1,GeneID:1100466;Name=NP_629177.1;Note=SCK15.27%2C possible transcriptional regulator%2C len: 305 aa%3B similar to TR:Q9RJS9 (EMBL:AL132707) Streptomyces coelicolor  transcriptional regulator SCF51.06 334 aa%3B fasta scores: opt: 166 z-score: 190.7 E(): 0.0037%3B 27.3%25 identity in 289 aa overlap and to SW:TIPA_STRLI (EMBL:S64314) Streptomyces lividans transcriptional activator TipA%2C 253 aa%3B fasta scores: opt: 174 z-score: 201.3 E(): 0.00096%3B 35.5%25 identity in 107 aa overlap. Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and possible helix-turn-helix at residues 11..32 (+2.74 SD);gbkey=CDS;gene=SCK15.27;product=transcriptional regulator;protein_id=NP_629177.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5459033	5459140	.	+	.	ID=id6425;Dbxref=GeneID:1100466;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 39.80%2C E-value 6e-08;gbkey=misc_feature;gene=SCK15.27
NC_003888.3	RefSeq	ribosome_entry_site	5459896	5459899	.	+	.	ID=id6426;Dbxref=GeneID:1100466;gbkey=RBS;gene=SCK15.27
NC_003888.3	RefSeq	gene	5459908	5460726	.	+	.	ID=gene5078;Dbxref=GeneID:1100467;Name=SCK15.28;gbkey=Gene;gene=SCK15.28;gene_biotype=protein_coding;gene_synonym=SCK15.28;locus_tag=SCO5026
NC_003888.3	RefSeq	CDS	5459908	5460726	.	+	0	ID=cds4978;Parent=gene5078;Dbxref=Genbank:NP_629178.1,GeneID:1100467;Name=NP_629178.1;Note=SCK15.28%2C hypothetical protein%2C len: 272 aa%3B similar to TR:O06593 (EMBL:Z95586) Mycobacterium tuberculosis hypothetical 27.9 kD protein MTCY336.07c%2C 252 aa%3B fasta scores: opt: 968 z-score: 1156.3 E(): 0%3B 57.5%25 identity in 254 aa overlap;gbkey=CDS;gene=SCK15.28;product=hypothetical protein;protein_id=NP_629178.1;transl_table=11
NC_003888.3	RefSeq	gene	5460757	5461950	.	-	.	ID=gene5079;Dbxref=GeneID:1100468;Name=SCK15.29c;gbkey=Gene;gene=SCK15.29c;gene_biotype=protein_coding;gene_synonym=SCK15.29c;locus_tag=SCO5027
NC_003888.3	RefSeq	CDS	5460757	5461950	.	-	0	ID=cds4979;Parent=gene5079;Dbxref=Genbank:NP_629179.1,GeneID:1100468;Name=NP_629179.1;Note=SCK15.29c%2C hypothetical protein%2C len: 397 aa%3B similar to TR:Q9RKN1 (EMBL:AL121850) Streptomyces coelicolor hypothetical 37.4 kD protein (fragment) SCC78.05%2C 347 aa%3B fasta scores: opt: 180 z-score: 199.8 E(): 0.0012%3B 28.6%25 identity in 360 aa overlap;gbkey=CDS;gene=SCK15.29c;product=hypothetical protein;protein_id=NP_629179.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5462236	5462434	.	+	.	ID=id6427;Note=high G+C content region (81.4%25);gbkey=misc_feature
NC_003888.3	RefSeq	gene	5463012	5464337	.	+	.	ID=gene5080;Dbxref=GeneID:1100469;Name=SCK7.01;gbkey=Gene;gene=SCK7.01;gene_biotype=protein_coding;gene_synonym=SCK7.01;locus_tag=SCO5028
NC_003888.3	RefSeq	CDS	5463012	5464337	.	+	0	ID=cds4980;Parent=gene5080;Dbxref=Genbank:NP_629180.1,GeneID:1100469;Name=NP_629180.1;Note=SCK7.01%2C possible ATP-binding protein%2C len: 441 aa%3B similar to TR:Q9X792 (EMBL:AL049491) Mycobacterium leprae  ATP-binding protein MLCB1222.20%2C 433 aa%3B fasta scores: opt: 2024 z-score: 2236.8 E(): 0%3B 72.2%25 identity in 428 aa overlap. Contains and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCK7.01;product=ATP-binding protein;protein_id=NP_629180.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5463780	5463803	.	+	.	ID=id6428;Dbxref=GeneID:1100469;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCK7.01
NC_003888.3	RefSeq	gene	5464767	5465483	.	+	.	ID=gene5081;Dbxref=GeneID:1100470;Name=SCK7.02;gbkey=Gene;gene=SCK7.02;gene_biotype=protein_coding;gene_synonym=SCK7.02;locus_tag=SCO5029
NC_003888.3	RefSeq	CDS	5464767	5465483	.	+	0	ID=cds4981;Parent=gene5081;Dbxref=Genbank:NP_629181.1,GeneID:1100470;Name=NP_629181.1;Note=SCK7.02%2C possible hypothetical protein%2C len: 238 aa%3B similar to C-terminal region of TR:CAB93446 (EMBL:AL357591) Streptomyces coelicolor hypothetical 16.0 kDa protein SCC53.17%2C 154 aa%3B fasta scores: opt: 477 z-score: 484.5 E(): 1.6e-19%3B 64.4%25 identity in 101 aa overlap. Contains possible N-terminal region signal peptide sequence and possible coiled-coil region at aprox. residues 82..123;gbkey=CDS;gene=SCK7.02;product=hypothetical protein;protein_id=NP_629181.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5465635	5465638	.	+	.	ID=id6429;gbkey=RBS
NC_003888.3	RefSeq	gene	5465646	5467043	.	+	.	ID=gene5082;Dbxref=GeneID:1100471;Name=SCK7.03;gbkey=Gene;gene=SCK7.03;gene_biotype=protein_coding;gene_synonym=SCK7.03;locus_tag=SCO5030
NC_003888.3	RefSeq	CDS	5465646	5467043	.	+	0	ID=cds4982;Parent=gene5082;Dbxref=Genbank:NP_629182.1,GeneID:1100471;Name=NP_629182.1;Note=SCK7.03%2C possible integral membrane protein%2C len: 465 aa%3B similar to SW:Y205_MYCTU (EMBL:AL021928) Mycobacterium tuberculosis hypothetical 38.0 kDa protein MTV033.13%2C 367 aa%3B fasta scores: opt: 892 z-score: 833.4 E(): 0%3B 41.1%25 identity in 343 aa overlap. Contains Pfam match to entry PF01594 UPF0118%2C Domain of unknown function DUF20 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK7.03;product=hypothetical protein;protein_id=NP_629182.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5465913	5466896	.	+	.	ID=id6430;Dbxref=GeneID:1100471;Note=Pfam match to entry PF01594 UPF0118%2C Domain of unknown function DUF20%2C score 201.10%2C E-value 1.7e-56;gbkey=misc_feature;gene=SCK7.03
NC_003888.3	RefSeq	sequence_feature	5467128	5469737	.	+	.	ID=id6431;Note=previously sequenced fragment. EMBL:AF186371 Streptomyces coelicolor A3(2) AhpD (ahpD)%2C AhpC (ahpC)%2C and OxyR (oxyR) genes%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5467332	5467868	.	-	.	ID=gene5083;Dbxref=GeneID:1100472;Name=ahpD;gbkey=Gene;gene=ahpD;gene_biotype=protein_coding;gene_synonym=ahpD,SCK7.04c;locus_tag=SCO5031
NC_003888.3	RefSeq	CDS	5467332	5467868	.	-	0	ID=cds4983;Parent=gene5083;Dbxref=Genbank:NP_629183.1,GeneID:1100472;Name=NP_629183.1;Note=SCK7.04c%2C ahpD%2C alkyl hydroperoxide reductase system hypothetical protein%2C len: 178 aa%3B identical to previously sequenced TR:Q9RN73 (EMBL:AF186371) Streptomyces coelicolor A3(2) AhpD%2C 178 aa;gbkey=CDS;gene=ahpD;product=hypothetical protein;protein_id=NP_629183.1;transl_table=11
NC_003888.3	RefSeq	gene	5467875	5468429	.	-	.	ID=gene5084;Dbxref=GeneID:1100473;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;gene_synonym=ahpC,SCK7.05c;locus_tag=SCO5032
NC_003888.3	RefSeq	CDS	5467875	5468429	.	-	0	ID=cds4984;Parent=gene5084;Dbxref=Genbank:NP_629184.1,GeneID:1100473;Name=NP_629184.1;Note=SCK7.05c%2C ahpC%2C alkyl hydroperoxide reductase%2C len:184 aa%3B identical to previously seqeunced TR:Q9RN72 (EMBL:AF186371) Streptomyces coelicolor A3(2) AhpC%2C 184 aa. Contains Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family;gbkey=CDS;gene=ahpC;product=alkyl hydroperoxide reductase;protein_id=NP_629184.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5467971	5468420	.	-	.	ID=id6432;Dbxref=GeneID:1100473;Note=Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family%2C score 159.60%2C E-value 5.2e-44;gbkey=misc_feature;gene=ahpC
NC_003888.3	RefSeq	ribosome_entry_site	5468435	5468438	.	-	.	ID=id6433;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5468553	5468558	.	+	.	ID=id6434;gbkey=RBS
NC_003888.3	RefSeq	gene	5468567	5469505	.	+	.	ID=gene5085;Dbxref=GeneID:1100474;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;gene_synonym=oxyR,SCK7.06;locus_tag=SCO5033
NC_003888.3	RefSeq	CDS	5468567	5469505	.	+	0	ID=cds4985;Parent=gene5085;Dbxref=Genbank:NP_629185.1,GeneID:1100474;Name=NP_629185.1;Note=SCK7.06%2C oxyR%2C hydrogen peroxide sensing regulator%2C len: 312 aa%3B identical to previously sequenced TR:Q9RN71 (EMBL:AF186371) Streptomyces coelicolor A3(2) hydrogen peroxide sensing regulator OxyR%2C 313 aa. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry S00044 Bacterial regulatory proteins%2C lysR family signature. Also contains possible helix-turn-helix motif at residues 23..44 (+3.89 SD);gbkey=CDS;gene=oxyR;product=hydrogen peroxide sensing regulator;protein_id=NP_629185.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5468594	5469022	.	+	.	ID=id6435;Dbxref=GeneID:1100474;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 165.90%2C E-value 6.6e-46;gbkey=misc_feature;gene=oxyR
NC_003888.3	RefSeq	sequence_feature	5468636	5468728	.	+	.	ID=id6436;Dbxref=GeneID:1100474;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=oxyR
NC_003888.3	RefSeq	gene	5469633	5471969	.	-	.	ID=gene5086;Dbxref=GeneID:1100475;Name=SCK7.07c;gbkey=Gene;gene=SCK7.07c;gene_biotype=protein_coding;gene_synonym=SCK7.07c;locus_tag=SCO5034
NC_003888.3	RefSeq	CDS	5469633	5471969	.	-	0	ID=cds4986;Parent=gene5086;Dbxref=Genbank:NP_629186.1,GeneID:1100475;Name=NP_629186.1;Note=SCK7.07c%2C possible integral membrane protein%2C len: 778 aa%3B similar to TR:AAF74504 (EMBL:M34538) Streptomyces clavuligerus hypothetical 42.6 kDa protein (fragment) 407 aa%3B fasta scores: opt: 509 z-score: 559.6 E(): 1.1e-23%3B 31.5%25 identity in 413 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK7.07c;product=hypothetical protein;protein_id=NP_629186.1;transl_table=11
NC_003888.3	RefSeq	gene	5471972	5472661	.	-	.	ID=gene5087;Dbxref=GeneID:1100476;Name=SCK7.08c;gbkey=Gene;gene=SCK7.08c;gene_biotype=protein_coding;gene_synonym=SCK7.08c;locus_tag=SCO5035
NC_003888.3	RefSeq	CDS	5471972	5472661	.	-	0	ID=cds4987;Parent=gene5087;Dbxref=Genbank:NP_629187.1,GeneID:1100476;Name=NP_629187.1;Note=SCK7.08c%2C possible ABC transporter ATP-binding protein%2C len: 229 aa%3B similar to TR:CAB81857 (EMBL:AL161691) Streptomyces coelicolor ABC transporter ATP-binding protein SCD40A.12c%2C 246 aa%3B fasta scores: opt: 597 z-score: 668.0 E(): 9.7e-30%3B 47.6%25 identity in 206 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCK7.08c;product=ABC transporter ATP-binding protein;protein_id=NP_629187.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5472002	5472562	.	-	.	ID=id6437;Dbxref=GeneID:1100476;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 224.40%2C E-value 1.6e-63;gbkey=misc_feature;gene=SCK7.08c
NC_003888.3	RefSeq	sequence_feature	5472518	5472541	.	-	.	ID=id6438;Dbxref=GeneID:1100476;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCK7.08c
NC_003888.3	RefSeq	gene	5472658	5473182	.	-	.	ID=gene5088;Dbxref=GeneID:1100477;Name=SCK7.09c;gbkey=Gene;gene=SCK7.09c;gene_biotype=protein_coding;gene_synonym=SCK7.09c;locus_tag=SCO5036
NC_003888.3	RefSeq	CDS	5472658	5473182	.	-	0	ID=cds4988;Parent=gene5088;Dbxref=Genbank:NP_629188.1,GeneID:1100477;Name=NP_629188.1;Note=SCK7.09c%2C hypothetical protein%2C len: 174 aa%3B similar to TR:O50432 (EMBL:AL010186) Mycobacterium tuberculosis hypothetical 21.1 kDa protein MTV005.12c%2C 189 aa%3B fasta scores: opt: 183 z-score: 238.8 E(): 7.8e-06%3B 30.1%25 identity in 186 aa overlap;gbkey=CDS;gene=SCK7.09c;product=hypothetical protein;protein_id=NP_629188.1;transl_table=11
NC_003888.3	RefSeq	gene	5473366	5473671	.	-	.	ID=gene5089;Dbxref=GeneID:1100478;Name=SCK7.10c;gbkey=Gene;gene=SCK7.10c;gene_biotype=protein_coding;gene_synonym=SCK7.10c;locus_tag=SCO5037
NC_003888.3	RefSeq	CDS	5473366	5473671	.	-	0	ID=cds4989;Parent=gene5089;Dbxref=Genbank:NP_629189.1,GeneID:1100478;Name=NP_629189.1;Note=SCK7.10c%2C unknown%2C len: 101 aa. Highly hydrophilic. Also high in G+C content (80.52 %25);gbkey=CDS;gene=SCK7.10c;product=hypothetical protein;protein_id=NP_629189.1;transl_table=11
NC_003888.3	RefSeq	gene	5473668	5474606	.	-	.	ID=gene5090;Dbxref=GeneID:1100479;Name=SCK7.11c;gbkey=Gene;gene=SCK7.11c;gene_biotype=protein_coding;gene_synonym=SCK7.11c;locus_tag=SCO5038
NC_003888.3	RefSeq	CDS	5473668	5474606	.	-	0	ID=cds4990;Parent=gene5090;Dbxref=Genbank:NP_629190.1,GeneID:1100479;Name=NP_629190.1;Note=SCK7.11c%2C possible integral membrane protein%2C len: 312 aa%3B similar to TR:Q9RDB7 (EMBL:AL136058) Streptomyces coelicolor  membrane protein SCE20.08c%2C 383 aa%3B fasta scores: opt: 467 z-score: 517.9 E(): 2.2e-21%3B 31.2%25 identity in 301 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK7.11c;product=hypothetical protein;protein_id=NP_629190.1;transl_table=11
NC_003888.3	RefSeq	gene	5475026	5477176	.	+	.	ID=gene5091;Dbxref=GeneID:1100480;Name=SCK7.12;gbkey=Gene;gene=SCK7.12;gene_biotype=protein_coding;gene_synonym=SCK7.12;locus_tag=SCO5039
NC_003888.3	RefSeq	CDS	5475026	5477176	.	+	0	ID=cds4991;Parent=gene5091;Dbxref=Genbank:NP_629191.1,GeneID:1100480;Name=NP_629191.1;Note=SCK7.12%2C possible penicillin-binding protein%2C len: 773 aa%3B similar to TR:CAB88838 (EMBL:AL353832) Streptomyces coelicolor probable penicillin-binding protein SCE6.34%2C 756 aa%3B fasta scores: opt: 1080 z-score: 911.6 E(): 0%3B 46.0%25 identity in 733 aa overlap and to SW:PBPD_BACSU (EMBL:U11882) Bacillus subtilis penicillin-binding protein 4 precursor PbpD%2C 624 aa%3B fasta scores: opt: 513 z-score: 438.2 E(): 6.1e-17%3B 28.7%25 identity in 582 aa overlap. Contains Pfam matches to entries PF00912 Transglycosyl%2C Transglycosylase and PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain and 2x matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCK7.12;product=penicillin-binding protein;protein_id=NP_629191.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5475095	5475598	.	+	.	ID=id6439;Dbxref=GeneID:1100480;Note=Pfam match to entry PF00912 Transglycosyl%2C Transglycosylase%2C score 190.50%2C E-value 2.6e-53;gbkey=misc_feature;gene=SCK7.12
NC_003888.3	RefSeq	sequence_feature	5475866	5476801	.	+	.	ID=id6440;Dbxref=GeneID:1100480;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 74.70%2C E-value 1.9e-18;gbkey=misc_feature;gene=SCK7.12
NC_003888.3	RefSeq	sequence_feature	5476655	5476678	.	+	.	ID=id6441;Dbxref=GeneID:1100480;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCK7.12
NC_003888.3	RefSeq	gene	5477315	5479528	.	-	.	ID=gene5092;Dbxref=GeneID:1100481;Name=SCK7.13c;gbkey=Gene;gene=SCK7.13c;gene_biotype=protein_coding;gene_synonym=SCK7.13c;locus_tag=SCO5040
NC_003888.3	RefSeq	CDS	5477315	5479528	.	-	0	ID=cds4992;Parent=gene5092;Dbxref=Genbank:NP_629192.1,GeneID:1100481;Name=NP_629192.1;Note=SCK7.13c%2C conserved hypothetical protein%2C len: 737 aa%3B similar to TR:Q9ZBJ0 (EMBL:AL035161) Streptomyces coelicolor conserved hypothetical protein SC9C7.20%2C 860 aa%3B fasta scores: opt: 1430 z-score: 1211.3 E(): 0%3B 37.5%25 identity in 787 aa overlap. Contains match to Prosite entry%2C TTA leucine codon%2C possible target for bldA regulation and 3x degenerate repeat (P/A)(D/G)GGQ;gbkey=CDS;gene=SCK7.13c;product=hypothetical protein;protein_id=NP_629192.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5479223	5479267	.	-	.	ID=id6442;Dbxref=GeneID:1100481;Note=3x degenerate repeat translated into SCK7.13c;gbkey=repeat_region;gene=SCK7.13c
NC_003888.3	RefSeq	sequence_feature	5479415	5479417	.	-	.	ID=id6443;Dbxref=GeneID:1100481;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCK7.13c
NC_003888.3	RefSeq	gene	5479825	5480535	.	-	.	ID=gene5093;Dbxref=GeneID:1100482;Name=SCK7.14c;gbkey=Gene;gene=SCK7.14c;gene_biotype=protein_coding;gene_synonym=SCK7.14c;locus_tag=SCO5041
NC_003888.3	RefSeq	CDS	5479825	5480535	.	-	0	ID=cds4993;Parent=gene5093;Dbxref=Genbank:NP_629193.1,GeneID:1100482;Name=NP_629193.1;Note=SCK7.14%2C hypothetical protein%2C len: 236 aa%3B similar to TR:O83033 (EMBL:AB016934) Streptomyces wedmorensis FomD protein%2C 209 aa%3B fasta scores: opt: 282 z-score: 320.1 E(): 2.3e-10%3B 34.5%25 identity in 197 aa overlap;gbkey=CDS;gene=SCK7.14c;product=hypothetical protein;protein_id=NP_629193.1;transl_table=11
NC_003888.3	RefSeq	gene	5480624	5482009	.	-	.	ID=gene5094;Dbxref=GeneID:1100483;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;gene_synonym=SCK7.15c;locus_tag=SCO5042
NC_003888.3	RefSeq	CDS	5480624	5482009	.	-	0	ID=cds4994;Parent=gene5094;Dbxref=Genbank:NP_629194.1,GeneID:1100483;Name=NP_629194.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase;protein_id=NP_629194.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5480642	5481976	.	-	.	ID=id6444;Dbxref=GeneID:1100483;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 508.30%2C E-value 5.9e-149;gbkey=misc_feature;gene=fumC
NC_003888.3	RefSeq	sequence_feature	5481050	5481079	.	-	.	ID=id6445;Dbxref=GeneID:1100483;Note=PS00163 Fumarate lyases signature;gbkey=misc_feature;gene=fumC
NC_003888.3	RefSeq	gene	5482101	5483561	.	-	.	ID=gene5095;Dbxref=GeneID:1100484;Name=SCK7.16c;gbkey=Gene;gene=SCK7.16c;gene_biotype=protein_coding;gene_synonym=SCK7.16c;locus_tag=SCO5043
NC_003888.3	RefSeq	CDS	5482101	5483561	.	-	0	ID=cds4995;Parent=gene5095;Dbxref=Genbank:NP_629195.1,GeneID:1100484;Name=NP_629195.1;Note=SCK7.16c%2C probable hydrolase (membrane protein)%2C len: 486 aa%3B N-terminal similar to SW:APX_STRGR Streptomyces griseus aminopeptidase (EC 3.4.11.-)%2C 284 aa%3B fasta scores: opt: 967 z-score: 1057.3 E(): 0%3B 53.7%25 identity in 283 aa overlap and C-terminal region similar to TR:O69311 (EMBL:D84193) Streptomyces lividans chitinase (EC 3.2.1.14) ChiB%2C 610 aa%3B blastp scores: Score %3D 87 (30.6 bits)%2C Expect %3D 2.1%2C P %3D 0.87%3B Identities %3D 46/159 (28%25)%2C Positives %3D 60/159 (37%25). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCK7.16c;product=hydrolase membrane protein;protein_id=NP_629195.1;transl_table=11
NC_003888.3	RefSeq	gene	5483742	5485418	.	-	.	ID=gene5096;Dbxref=GeneID:1100485;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;gene_synonym=fumB,SCK7.17c;locus_tag=SCO5044
NC_003888.3	RefSeq	CDS	5483742	5485418	.	-	0	ID=cds4996;Parent=gene5096;Dbxref=Genbank:NP_629196.1,GeneID:1100485;Name=NP_629196.1;Note=SCK7.17c%2C fumB%2C fumarate hydratase class I%2C len: 558 aa%3B similar to SW:FUMB_ECOLI (EMBL:M27058) Escherichia coli fumarate hydratase class I%2C anaerobic (EC 4.2.1.2) FumB%2C 548 aa%3B fasta scores: opt: 2386 z-score: 2782.7 E(): 0%3B 64.9%25 identity in 539 aa overlap. Contains Pfam match to entry PF00206 lyase_1%2C Lyase and match to Prosite entry PS00163 Fumarate lyases signature;gbkey=CDS;gene=fumB;product=fumarate hydratase class I;protein_id=NP_629196.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5483925	5484269	.	-	.	ID=id6446;Dbxref=GeneID:1100485;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 61.10%2C E-value 2.9e-16;gbkey=misc_feature;gene=fumB
NC_003888.3	RefSeq	sequence_feature	5484015	5484044	.	-	.	ID=id6447;Dbxref=GeneID:1100485;Note=PS00163 Fumarate lyases signature;gbkey=misc_feature;gene=fumB
NC_003888.3	RefSeq	ribosome_entry_site	5485420	5485423	.	-	.	ID=id6448;gbkey=RBS
NC_003888.3	RefSeq	gene	5485654	5486337	.	+	.	ID=gene5097;Dbxref=GeneID:1100486;Name=SCK7.18;gbkey=Gene;gene=SCK7.18;gene_biotype=protein_coding;gene_synonym=SCK7.18;locus_tag=SCO5045
NC_003888.3	RefSeq	CDS	5485654	5486337	.	+	0	ID=cds4997;Parent=gene5097;Dbxref=Genbank:NP_629197.1,GeneID:1100486;Name=NP_629197.1;Note=SCK7.18%2C conserved hypothetical protein%2C len: 227 aa%3B similar to TR:CAB88834 (EMBL:AL353832) Streptomyces coelicolor hypothetical 30.8 kDa protein SCE6.30c%2C 277 aa%3B fasta scores: opt: 403 z-score: 468.8 E(): 1.2e-18%3B 38.6%25 identity in 220 aa overlap;gbkey=CDS;gene=SCK7.18;product=hypothetical protein;protein_id=NP_629197.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5486087	5487329	.	+	.	ID=id6449;Note=previously sequenced DNA fragment. EMBL:AJ239088 Streptomyces coelicolor wblI gene for hypothetical protein;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5486430	5486435	.	+	.	ID=id6450;gbkey=RBS
NC_003888.3	RefSeq	gene	5486443	5486820	.	+	.	ID=gene5098;Dbxref=GeneID:1100487;Name=SCK7.19;gbkey=Gene;gene=SCK7.19;gene_biotype=protein_coding;gene_synonym=SCK7.19,wblI;locus_tag=SCO5046
NC_003888.3	RefSeq	CDS	5486443	5486820	.	+	0	ID=cds4998;Parent=gene5098;Dbxref=Genbank:NP_629198.1,GeneID:1100487;Name=NP_629198.1;Note=SCK7.19%2C wblI%2C len: 125 aa%3B identical to previously sequenced TR:Q9X953 (EMBL:AJ239088) Streptomyces coelicolor hypothetical 13.9 kDa protein WblI%2C 125 aa and to TR:O88103 (EMBL:AJ010601) Streptomyces coelicolor WhiD protein%2C 112 aa%3B fasta scores: opt: 297 z-score: 395.0 E(): 1.6e-14%3B 46.7%25 identity in 105 aa overlap;gbkey=CDS;gene=SCK7.19;product=hypothetical protein;protein_id=NP_629198.1;transl_table=11
NC_003888.3	RefSeq	gene	5487077	5488108	.	-	.	ID=gene5099;Dbxref=GeneID:1100488;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;gene_synonym=SCK7.20c;locus_tag=SCO5047
NC_003888.3	RefSeq	CDS	5487077	5488108	.	-	0	ID=cds4999;Parent=gene5099;Dbxref=Genbank:NP_629199.1,GeneID:1100488;Name=NP_629199.1;Note=type II fructose 1%2C6-bisphosphatae%3B in Escherichia coli this protein forms a dimer and binds manganese;gbkey=CDS;gene=glpX;product=fructose 1%2C6-bisphosphatase II;protein_id=NP_629199.1;transl_table=11
NC_003888.3	RefSeq	gene	5488244	5488768	.	+	.	ID=gene5100;Dbxref=GeneID:1100489;Name=SCK7.21;gbkey=Gene;gene=SCK7.21;gene_biotype=protein_coding;gene_synonym=SCK7.21;locus_tag=SCO5048
NC_003888.3	RefSeq	CDS	5488244	5488768	.	+	0	ID=cds5000;Parent=gene5100;Dbxref=Genbank:NP_629200.1,GeneID:1100489;Name=NP_629200.1;Note=SCK7.21%2C possible hypothetical protein%2C len: 174 aa. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SCK7.21;product=hypothetical protein;protein_id=NP_629200.1;transl_table=11
NC_003888.3	RefSeq	gene	5488832	5489422	.	-	.	ID=gene5101;Dbxref=GeneID:1100490;Name=SCK7.22c;gbkey=Gene;gene=SCK7.22c;gene_biotype=protein_coding;gene_synonym=SCK7.22c;locus_tag=SCO5049
NC_003888.3	RefSeq	CDS	5488832	5489422	.	-	0	ID=cds5001;Parent=gene5101;Dbxref=Genbank:NP_629201.1,GeneID:1100490;Name=NP_629201.1;Note=SCK7.22%2C hypothetical protein%2C len: 196 aa%3B similar to TR:P75894 (EMBL:AE000202) Escherichia coli hypothetical protein%2C 196 aa%3B fasta scores: opt: 466 z-score: 572.4 E(): 2e-24%3B 40.6%25 identity in 192 aa overlap and to SW:YDFN_BACSU (EMBL:AB001488) Bacillus subtilis  NAD(P)H nitroreductase YdfN%2C 206 aa%3B fasta scores: opt: 133 z-score: 170.9 E(): 0.047%3B 23.1%25 identity in 199 aa overlap. Contains Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family. Similar also to TR:Q9FBV0 (EMBL:AL391072) Streptomyces coelicolor nitroreductase SC9A4.03c%2C 202 aa%3B fasta scores: opt: 599 Z-score: 706.0 E(): 1.1e-31%3B 49.474%25 identity in 190 aa overlap;gbkey=CDS;gene=SCK7.22c;product=hypothetical protein;protein_id=NP_629201.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5488937	5489341	.	-	.	ID=id6451;Dbxref=GeneID:1100490;Note=Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family%2C score 10.40%2C E-value 0.00063;gbkey=misc_feature;gene=SCK7.22c
NC_003888.3	RefSeq	gene	5489640	5490971	.	+	.	ID=gene5102;Dbxref=GeneID:1100491;Name=SCK7.23;gbkey=Gene;gene=SCK7.23;gene_biotype=protein_coding;gene_synonym=SCK7.23;locus_tag=SCO5050
NC_003888.3	RefSeq	CDS	5489640	5490971	.	+	0	ID=cds5002;Parent=gene5102;Dbxref=Genbank:NP_629202.1,GeneID:1100491;Name=NP_629202.1;Note=SCK7.23%2C possible nucleotide-sugar dehydrogenase%2C len: 443 aa%3B similar to TR:CAB82012 (EMBL:AL161755) Streptomyces coelicolor nucleotide-sugar dehydrogenase SCD63.05c%2C 405 aa%3B fasta scores: opt: 736 z-score: 812.9 E(): 0%3B 36.2%25 identity in 423 aa overlap. Contains Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family;gbkey=CDS;gene=SCK7.23;product=nucleotide-sugar dehydrogenase;protein_id=NP_629202.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5489682	5490893	.	+	.	ID=id6452;Dbxref=GeneID:1100491;Note=Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family%2C score 293.40%2C E-value 2.7e-84;gbkey=misc_feature;gene=SCK7.23
NC_003888.3	RefSeq	ribosome_entry_site	5490956	5490960	.	+	.	ID=id6453;Dbxref=GeneID:1100491;gbkey=RBS;gene=SCK7.23
NC_003888.3	RefSeq	gene	5490968	5492431	.	+	.	ID=gene5103;Dbxref=GeneID:1100492;Name=SCK7.24;gbkey=Gene;gene=SCK7.24;gene_biotype=protein_coding;gene_synonym=SCK7.24;locus_tag=SCO5051
NC_003888.3	RefSeq	CDS	5490968	5492431	.	+	0	ID=cds5003;Parent=gene5103;Dbxref=Genbank:NP_629203.1,GeneID:1100492;Name=NP_629203.1;Note=SCK7.24%2C possible glycosyltransferase%2C len: 487 aa%3B similar to SW:NODC_RHIME (EMBL:X01649) Rhizobium meliloti N-acetylglucosaminyltransferase (EC 2.4.1.-) NodC%2C 426 aa%3B fasta scores: opt: 377 z-score: 447.1 E(): 2e-17%3B 29.6%25 identity in 433 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK7.24;product=glycosyltransferase;protein_id=NP_629203.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5491316	5491822	.	+	.	ID=id6454;Dbxref=GeneID:1100492;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 77.20%2C E-value 3.3e-19;gbkey=misc_feature;gene=SCK7.24
NC_003888.3	RefSeq	ribosome_entry_site	5492417	5492421	.	+	.	ID=id6455;Dbxref=GeneID:1100492;gbkey=RBS;gene=SCK7.24
NC_003888.3	RefSeq	gene	5492428	5492535	.	+	.	ID=gene5104;Dbxref=GeneID:1100493;Name=SCK7.25;gbkey=Gene;gene=SCK7.25;gene_biotype=protein_coding;gene_synonym=SCK7.25;locus_tag=SCO5052
NC_003888.3	RefSeq	CDS	5492428	5492535	.	+	0	ID=cds5004;Parent=gene5104;Dbxref=Genbank:NP_629204.1,GeneID:1100493;Name=NP_629204.1;Note=SCK7.25%2C possible membrane protein%2C len: 35 aa. Doubtful CDS. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCK7.25;product=hypothetical protein;protein_id=NP_629204.1;transl_table=11
NC_003888.3	RefSeq	gene	5492532	5494091	.	+	.	ID=gene5105;Dbxref=GeneID:1100494;Name=SCK7.26;gbkey=Gene;gene=SCK7.26;gene_biotype=protein_coding;gene_synonym=SCK7.26;locus_tag=SCO5053
NC_003888.3	RefSeq	CDS	5492532	5494091	.	+	0	ID=cds5005;Parent=gene5105;Dbxref=Genbank:NP_629205.1,GeneID:1100494;Name=NP_629205.1;Note=SCK7.26%2C possible hypothetical protein%2C len: 519 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCK7.26;product=hypothetical protein;protein_id=NP_629205.1;transl_table=11
NC_003888.3	RefSeq	gene	5494102	5494416	.	+	.	ID=gene5106;Dbxref=GeneID:1100495;Name=SCK7.27;gbkey=Gene;gene=SCK7.27;gene_biotype=protein_coding;gene_synonym=SCK7.27;locus_tag=SCO5054
NC_003888.3	RefSeq	CDS	5494102	5494416	.	+	0	ID=cds5006;Parent=gene5106;Dbxref=Genbank:NP_629206.1,GeneID:1100495;Name=NP_629206.1;Note=SCK7.27%2C unknown%2C len: 104 aa;gbkey=CDS;gene=SCK7.27;product=hypothetical protein;protein_id=NP_629206.1;transl_table=11
NC_003888.3	RefSeq	gene	5494413	5494679	.	-	.	ID=gene5107;Dbxref=GeneID:1100496;Name=SCK7.28c;gbkey=Gene;gene=SCK7.28c;gene_biotype=protein_coding;gene_synonym=SCK7.28c;locus_tag=SCO5055
NC_003888.3	RefSeq	CDS	5494413	5494679	.	-	0	ID=cds5007;Parent=gene5107;Dbxref=Genbank:NP_629207.1,GeneID:1100496;Name=NP_629207.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;gene=SCK7.28c;product=exodeoxyribonuclease VII small subunit;protein_id=NP_629207.1;transl_table=11
NC_003888.3	RefSeq	gene	5494689	5495897	.	-	.	ID=gene5108;Dbxref=GeneID:1100497;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;gene_synonym=SCK7.29c;locus_tag=SCO5056
NC_003888.3	RefSeq	CDS	5494689	5495897	.	-	0	ID=cds5008;Parent=gene5108;Dbxref=Genbank:NP_629208.1,GeneID:1100497;Name=NP_629208.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII large subunit;protein_id=NP_629208.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5496052	5496076	.	+	.	ID=id6456;Note=3x degenerate repeat unit: CAGCGCG(T/C)GCCGCGCGTGTGT(C/T)GCC;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	5496162	5496186	.	+	.	ID=id6457;Note=3x degenerate repeat unit: CAGCGCG(T/C)GCCGCGCGTGTGT(C/T)GCC;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	5496272	5496296	.	+	.	ID=id6458;Note=3x degenerate repeat unit: CAGCGCG(T/C)GCCGCGCGTGTGT(C/T)GCC;gbkey=repeat_region
NC_003888.3	RefSeq	gene	5496474	5497856	.	-	.	ID=gene5109;Dbxref=GeneID:1100498;Name=SCK7.30c;gbkey=Gene;gene=SCK7.30c;gene_biotype=protein_coding;gene_synonym=SCK7.30c;locus_tag=SCO5057
NC_003888.3	RefSeq	CDS	5496474	5497856	.	-	0	ID=cds5009;Parent=gene5109;Dbxref=Genbank:NP_629209.1,GeneID:1100498;Name=NP_629209.1;Note=SCK7.30c%2C possible amino acid permease%2C len: 460 aa%3B similar to SW:MMUP_ECOLI (EMBL:D83536) Escherichia coli probable S-methylmethionine permease MmuP%2C 475 aa%3B fasta scores: opt: 345 z-score: 390.5 E(): 2.8e-14%3B 23.3%25 identity in 408 aa overlap and to TR:P74848 (EMBL:X99945) Salmonella typhimurium amino acid permease YeeF like protein%2C 448 aa%3B fasta scores: opt: 705 z-score: 792.4 E(): 0%3B 32.0%25 identity in 416 aa overlap. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCK7.30c;product=amino acid permease;protein_id=NP_629209.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5496498	5497733	.	-	.	ID=id6459;Dbxref=GeneID:1100498;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -171.30%2C E-value 2.7e-06;gbkey=misc_feature;gene=SCK7.30c
NC_003888.3	RefSeq	ribosome_entry_site	5497861	5497865	.	-	.	ID=id6460;gbkey=RBS
NC_003888.3	RefSeq	gene	5497985	5499001	.	+	.	ID=gene5110;Dbxref=GeneID:1100499;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=SCO5058
NC_003888.3	RefSeq	CDS	5497985	5499001	.	+	0	ID=cds5010;Parent=gene5110;Dbxref=Genbank:NP_733653.1,GeneID:1100499;Name=NP_733653.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=NP_733653.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5498555	5498860	.	+	.	ID=id6461;Dbxref=GeneID:1100499;Note=Pfam match to entry PF02401 LYTB%2C LytB protein%2C score -87.40%2C E-value 2.5e-05;gbkey=misc_feature;gene=ispH
NC_003888.3	RefSeq	gene	5499055	5499795	.	+	.	ID=gene5111;Dbxref=GeneID:1100500;Name=ppgK;gbkey=Gene;gene=ppgK;gene_biotype=protein_coding;gene_synonym=ppgK,SCBAC20F6.02;locus_tag=SCO5059
NC_003888.3	RefSeq	CDS	5499055	5499795	.	+	0	ID=cds5011;Parent=gene5111;Dbxref=Genbank:NP_629210.1,GeneID:1100500;Name=NP_629210.1;Note=SCBAC20F6.02%2C ppgK%2C polyphosphate glucokinase%2C len: 246 aa%3B highly similar to SW:PPGK_MYCTU (EMBL:U44834) Mycobacterium tuberculosis polyphosphate glucokinase (EC 2.7.1.63) PpgK or RV2702 or MTCY05A6.23%2C 265 aa%3B fasta scores: opt: 912 Z-score: 1042.8 bits: 200.5 E(): 1.7e-50%3B 57.322%25 identity in 239 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family;gbkey=CDS;gene=ppgK;product=polyphosphate glucokinase;protein_id=NP_629210.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5499067	5499477	.	+	.	ID=id6462;Dbxref=GeneID:1100500;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 21.60%2C E-value 2.4e-05;gbkey=misc_feature;gene=ppgK
NC_003888.3	RefSeq	gene	5499806	5500408	.	-	.	ID=gene5112;Dbxref=GeneID:1100501;Name=SCBAC20F6.03c;gbkey=Gene;gene=SCBAC20F6.03c;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.03c;locus_tag=SCO5060
NC_003888.3	RefSeq	CDS	5499806	5500408	.	-	0	ID=cds5012;Parent=gene5112;Dbxref=Genbank:NP_629211.1,GeneID:1100501;Name=NP_629211.1;Note=SCBAC20F6.03c%2C possible integral membrane protein%2C len: 200 aa. Contains possible hydrophobic membrane spanning regions and high G+C content in N-terminal region;gbkey=CDS;gene=SCBAC20F6.03c;product=hypothetical protein;protein_id=NP_629211.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5500174	5500384	.	-	.	ID=id6463;Dbxref=GeneID:1100501;Note=high G+C content region (82.46%25);gbkey=misc_feature;gene=SCBAC20F6.03c
NC_003888.3	RefSeq	gene	5500594	5501682	.	+	.	ID=gene5113;Dbxref=GeneID:1100502;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;gene_synonym=ychF;locus_tag=SCO5061
NC_003888.3	RefSeq	CDS	5500594	5501682	.	+	0	ID=cds5013;Parent=gene5113;Dbxref=Genbank:NP_629212.1,GeneID:1100502;Name=NP_629212.1;Note=translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-dependent nucleic acid-binding protein EngD;protein_id=NP_629212.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5500606	5500725	.	+	.	ID=id6464;Dbxref=GeneID:1100502;Note=Pfam match to entry PF01018 GTP1_OBG%2C GTP1/OBG family%2C score 15.50%2C E-value 0.00092;gbkey=misc_feature;gene=ychF
NC_003888.3	RefSeq	sequence_feature	5500618	5500641	.	+	.	ID=id6465;Dbxref=GeneID:1100502;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ychF
NC_003888.3	RefSeq	gene	5501804	5502196	.	-	.	ID=gene5114;Dbxref=GeneID:1100503;Name=SCBAC20F6.05c;gbkey=Gene;gene=SCBAC20F6.05c;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.05c;locus_tag=SCO5062
NC_003888.3	RefSeq	CDS	5501804	5502196	.	-	0	ID=cds5014;Parent=gene5114;Dbxref=Genbank:NP_629213.1,GeneID:1100503;Name=NP_629213.1;Note=SCBAC20F6.05c%2C hypothetical protein%2C len: 130 aa%3B similar to TR:Q9X8E7 (EMBL:AL049573) Streptomyces coelicolor hypothetical 16.4 kDa protein SCE39.24%2C 148 aa%3B fasta scores: opt: 257 Z-score: 327.8 bits: 66.5 E(): 1.1e-10%3B 39.394%25 identity in 132 aa overlap;gbkey=CDS;gene=SCBAC20F6.05c;product=hypothetical protein;protein_id=NP_629213.1;transl_table=11
NC_003888.3	RefSeq	gene	5502196	5502447	.	-	.	ID=gene5115;Dbxref=GeneID:1100504;Name=SCBAC20F6.06c;gbkey=Gene;gene=SCBAC20F6.06c;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.06c;locus_tag=SCO5063
NC_003888.3	RefSeq	CDS	5502196	5502447	.	-	0	ID=cds5015;Parent=gene5115;Dbxref=Genbank:NP_629214.1,GeneID:1100504;Name=NP_629214.1;Note=SCBAC20F6.06c%2C hypothetical protein%2C len: 83 aa%3B similar to TR:Q9XAG7 (EMBL:AL079356) Streptomyces coelicolor hypothetical 8.8 kDa protein SC6G9.07%2C 84 aa%3B fasta scores: opt: 167 Z-score: 224.6 bits: 45.9 E(): 6.3e-05%3B 43.103%25 identity in 58 aa overlap;gbkey=CDS;gene=SCBAC20F6.06c;product=hypothetical protein;protein_id=NP_629214.1;transl_table=11
NC_003888.3	RefSeq	gene	5502446	5504848	.	+	.	ID=gene5116;Dbxref=GeneID:1100505;Name=SCBAC20F6.07;gbkey=Gene;gene=SCBAC20F6.07;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.07;locus_tag=SCO5064
NC_003888.3	RefSeq	CDS	5502446	5504848	.	+	0	ID=cds5016;Parent=gene5116;Dbxref=Genbank:NP_629215.1,GeneID:1100505;Name=NP_629215.1;Note=SCBAC20F6.07%2C possible bifunctional protein%2C len: 800 aa%3B N-terminal domain does not present similarity to any known protein and C-terminal half is similar to the C-terminal domain of may prokaryotic helicases%2C e.g. TR:Q9CE08 (EMBL:AE006434) Lactococcus lactis (subsp. lactis) SWI/SNF family helicase Snf%2C 1034 aa%3B fasta scores: opt: 317 Z-score: 332.6 bits: 72.8 E(): 6.1e-11%3B 29.817%25 identity in 436 aa overlap. Contains Pfam match to entry PF00176 SNF2_N%2C SNF2 and others N-terminal domain and Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain;gbkey=CDS;gene=SCBAC20F6.07;product=hypothetical protein;protein_id=NP_629215.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5503448	5503924	.	+	.	ID=id6466;Dbxref=GeneID:1100505;Note=Pfam match to entry PF00176 SNF2_N%2C SNF2 and others N-terminal domain%2C score 94.40%2C E-value 5.5e-25;gbkey=misc_feature;gene=SCBAC20F6.07
NC_003888.3	RefSeq	sequence_feature	5504285	5504536	.	+	.	ID=id6467;Dbxref=GeneID:1100505;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 31.50%2C E-value 2e-05;gbkey=misc_feature;gene=SCBAC20F6.07
NC_003888.3	RefSeq	gene	5504937	5507768	.	-	.	ID=gene5117;Dbxref=GeneID:1100506;Name=SCBAC20F6.08c;gbkey=Gene;gene=SCBAC20F6.08c;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.08c;locus_tag=SCO5065
NC_003888.3	RefSeq	CDS	5504937	5507768	.	-	0	ID=cds5017;Parent=gene5117;Dbxref=Genbank:NP_629216.1,GeneID:1100506;Name=NP_629216.1;Note=SCBAC20F6.08c%2C possible transcriptional regulator%2C len: 943 aa%3B similar to many transcriptional regulatory proteins%2C e.g. TR:Q9XAT8 (EMBL:U95170) Rhodococcus erythropolis ThcG%2C 927 aa%3B fasta scores: opt: 1419 Z-score: 1371.5 bits: 265.1 E(): 8.4e-69%3B 35.446%25 identity in 931 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains possible helix-turn-helix motif at residues 893..914 (+3.76 SD);gbkey=CDS;gene=SCBAC20F6.08c;product=transcriptional regulator;protein_id=NP_629216.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5504949	5505146	.	-	.	ID=id6468;Dbxref=GeneID:1100506;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 55.50%2C E-value 1.2e-12;gbkey=misc_feature;gene=SCBAC20F6.08c
NC_003888.3	RefSeq	sequence_feature	5505012	5505095	.	-	.	ID=id6469;Dbxref=GeneID:1100506;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SCBAC20F6.08c
NC_003888.3	RefSeq	sequence_feature	5507565	5507588	.	-	.	ID=id6470;Dbxref=GeneID:1100506;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC20F6.08c
NC_003888.3	RefSeq	ribosome_entry_site	5507774	5507777	.	-	.	ID=id6471;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5508068	5508071	.	+	.	ID=id6472;gbkey=RBS
NC_003888.3	RefSeq	gene	5508078	5508992	.	+	.	ID=gene5118;Dbxref=GeneID:1100507;Name=SCBAC20F6.09;gbkey=Gene;gene=SCBAC20F6.09;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.09;locus_tag=SCO5066
NC_003888.3	RefSeq	CDS	5508078	5508992	.	+	0	ID=cds5018;Parent=gene5118;Dbxref=Genbank:NP_629217.1,GeneID:1100507;Name=NP_629217.1;Note=SCBAC20F6.09%2C possible beta-lactamase%2C len: 304 aa%3B similar to TR:Q9X7X2 (EMBL:AL049485) Streptomyces coelicolor  beta-lactamase SC6E5.26c%2C 310 aa%3B fasta scores: opt: 598 Z-score: 696.3 bits: 136.9 E(): 3.4e-31%3B 53.115%25 identity in 305 aa overlap and to SW:BLA1_XANMA (EMBL:X75074) Xanthomonas maltophilia metallo-beta-lactamase L1 precursor (beta-lactamase%2C type II) (EC 3.5.2.6)%2C 290 aa%3B fasta scores: opt: 146 Z-score: 175.9 bits: 40.6 E(): 0.033%3B 25.952%25 identity in 289 aa overlap. Contains Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily and match to Prosite entry PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=CDS;gene=SCBAC20F6.09;product=beta-lactamase;protein_id=NP_629217.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5508240	5508896	.	+	.	ID=id6473;Dbxref=GeneID:1100507;Note=Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily%2C score 53.00%2C E-value 6.4e-12;gbkey=misc_feature;gene=SCBAC20F6.09
NC_003888.3	RefSeq	sequence_feature	5508288	5508320	.	+	.	ID=id6474;Dbxref=GeneID:1100507;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SCBAC20F6.09
NC_003888.3	RefSeq	ribosome_entry_site	5509001	5509006	.	+	.	ID=id6475;gbkey=RBS
NC_003888.3	RefSeq	gene	5509015	5510508	.	+	.	ID=gene5119;Dbxref=GeneID:1100508;Name=SCBAC20F6.10;gbkey=Gene;gene=SCBAC20F6.10;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.10;locus_tag=SCO5067
NC_003888.3	RefSeq	CDS	5509015	5510508	.	+	0	ID=cds5019;Parent=gene5119;Dbxref=Genbank:NP_629218.1,GeneID:1100508;Name=NP_629218.1;Note=SCBAC20F6.10%2C probable carboxylesterase%2C len: 497 aa%3B similar to SW:PNBA_BACSU (EMBL:U06089) Bacillus subtilis para-nitrobenzyl esterase (EC 3.1.1.*) PnbA%2C 489 aa%3B fasta scores: opt: 784 Z-score: 827.6 bits: 162.6 E(): 1.6e-38%3B 37.205%25 identity in 508 aa overlap. Contains 2x Pfam matches to entry PF00135 COesterase%2C Carboxylesterase and match to Prosite entry PS00122 Carboxylesterases type-B serine active site;gbkey=CDS;gene=SCBAC20F6.10;product=carboxylesterase;protein_id=NP_629218.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5509033	5509965	.	+	.	ID=id6476;Dbxref=GeneID:1100508;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterase%2C score 253.00%2C E-value 6e-73;gbkey=misc_feature;gene=SCBAC20F6.10
NC_003888.3	RefSeq	sequence_feature	5509552	5509599	.	+	.	ID=id6477;Dbxref=GeneID:1100508;Note=PS00122 Carboxylesterases type-B serine active site;gbkey=misc_feature;gene=SCBAC20F6.10
NC_003888.3	RefSeq	sequence_feature	5510119	5510502	.	+	.	ID=id6478;Dbxref=GeneID:1100508;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterase%2C score 47.70%2C E-value 3.2e-13;gbkey=misc_feature;gene=SCBAC20F6.10
NC_003888.3	RefSeq	gene	5510516	5511115	.	-	.	ID=gene5120;Dbxref=GeneID:1100509;Name=SCBAC20F6.11c;gbkey=Gene;gene=SCBAC20F6.11c;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.11c;locus_tag=SCO5068
NC_003888.3	RefSeq	CDS	5510516	5511115	.	-	0	ID=cds5020;Parent=gene5120;Dbxref=Genbank:NP_629219.1,GeneID:1100509;Name=NP_629219.1;Note=SCBAC20F6.11c%2C possible tetR-family transcriptional regulator%2C len: 199 aa%3B similar to many actinomycetes tetR-family transcriptional regulators%2C e.g. TR:Q9RJL5 (EMBL:AL121849) Streptomyces coelicolor tetR-family transcriptional regulator SCF6.16%2C 194 aa%3B fasta scores: opt: 419 Z-score: 483.9 bits: 96.4 E(): 2.3e-19%3B 38.095%25 identity in 189 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 36..57 (+4.64 SD);gbkey=CDS;gene=SCBAC20F6.11c;product=TetR family transcriptional regulator;protein_id=NP_629219.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5510918	5511055	.	-	.	ID=id6479;Dbxref=GeneID:1100509;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 52.60%2C E-value 5.2e-12;gbkey=misc_feature;gene=SCBAC20F6.11c
NC_003888.3	RefSeq	gene	5511271	5512227	.	+	.	ID=gene5121;Dbxref=GeneID:1100510;Name=SCBAC20F6.12;gbkey=Gene;gene=SCBAC20F6.12;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.12;locus_tag=SCO5069
NC_003888.3	RefSeq	CDS	5511271	5512227	.	+	0	ID=cds5021;Parent=gene5121;Dbxref=Genbank:NP_629220.1,GeneID:1100510;Name=NP_629220.1;Note=SCBAC20F6.12%2C possible oxidoreductase%2C len: 318 aa%3B similar to many oxidoreductases/dehydratases%2C e.g. TR:Q9WX20 (EMBL:AL079345) Streptomyces coelicolor dehydrogenase SCE68.12c%2C 318 aa%3B fasta scores: opt: 998 Z-score: 1062.9 bits: 204.9 E(): 1.3e-51%3B 52.997%25 identity in 317 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SCBAC20F6.12;product=oxidoreductase;protein_id=NP_629220.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5511310	5512215	.	+	.	ID=id6480;Dbxref=GeneID:1100510;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 182.30%2C E-value 8e-51;gbkey=misc_feature;gene=SCBAC20F6.12
NC_003888.3	RefSeq	sequence_feature	5512241	5517486	.	+	.	ID=id6481;Note=previously sequenced DNA fragment. EMBL:X62373 S.coelicolor genes for hydroxyacyl-CoA dehydrogenase;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5512268	5513452	.	-	.	ID=gene5122;Dbxref=GeneID:1100511;Name=SCBAC20F6.13c;gbkey=Gene;gene=SCBAC20F6.13c;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.13c;locus_tag=SCO5070
NC_003888.3	RefSeq	CDS	5512268	5513452	.	-	0	ID=cds5022;Parent=gene5122;Dbxref=Genbank:NP_629221.1,GeneID:1100511;Name=NP_629221.1;Note=SCBAC20F6.13c%2C ORFB hydroxylacyl-CoA dehydrogenase%2C len: 394 aa%3B identical to previously sequenced TR:Q53924 (EMBL:X62373) Streptomyces coelicolor hydroxylacyl-CoA dehydrogenase ORFB%2C 394 aa. There is an alternative start codon 120 base pairs upstream of the previously sequenced one;gbkey=CDS;gene=SCBAC20F6.13c;product=hydroxylacyl-CoA dehydrogenase;protein_id=NP_629221.1;transl_table=11
NC_003888.3	RefSeq	gene	5513809	5514249	.	-	.	ID=gene5123;Dbxref=GeneID:1100512;Name=SCBAC20F6.14c;gbkey=Gene;gene=SCBAC20F6.14c;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.14c;locus_tag=SCO5071
NC_003888.3	RefSeq	CDS	5513809	5514249	.	-	0	ID=cds5023;Parent=gene5123;Dbxref=Genbank:NP_629222.1,GeneID:1100512;Name=NP_629222.1;Note=SCBAC20F6.14c%2C ORFA hydroxylacyl-CoA dehydrogenase%2C len: 146 aa%3B identical to previously sequenced TR:Q53925 (EMBL:X62373) Streptomyces coelicolor hydroxylacyl-CoA dehydrogenase ORFA%2C 146 aa;gbkey=CDS;gene=SCBAC20F6.14c;product=hydroxylacyl-CoA dehydrogenase;protein_id=NP_629222.1;transl_table=11
NC_003888.3	RefSeq	gene	5514323	5515246	.	+	.	ID=gene5124;Dbxref=GeneID:1100513;Name=SCBAC20F6.15;gbkey=Gene;gene=SCBAC20F6.15;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.15;locus_tag=SCO5072
NC_003888.3	RefSeq	CDS	5514323	5515246	.	+	0	ID=cds5024;Parent=gene5124;Dbxref=Genbank:NP_629223.1,GeneID:1100513;Name=NP_629223.1;Note=SCBAC20F6.15%2C ORF1 hydroxylacyl-CoA dehydrogenase%2C len: 307 aa%3B identical to previously sequenced TR:Q53926 (EMBL:X62373) Streptomyces coelicolor hydroxylacyl-CoA dehydrogenase ORF1%2C 307 aa. Contains Pfam matches to entries PF02737 3HCDH_N%2C 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain and PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCBAC20F6.15;product=hydroxylacyl-CoA dehydrogenase;protein_id=NP_629223.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5514323	5514841	.	+	.	ID=id6482;Dbxref=GeneID:1100513;Note=Pfam match to entry PF02737 3HCDH_N%2C 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain%2C score 78.20%2C E-value 1.7e-19;gbkey=misc_feature;gene=SCBAC20F6.15
NC_003888.3	RefSeq	sequence_feature	5514848	5515156	.	+	.	ID=id6483;Dbxref=GeneID:1100513;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain%2C score -8.40%2C E-value 0.048;gbkey=misc_feature;gene=SCBAC20F6.15
NC_003888.3	RefSeq	ribosome_entry_site	5515233	5515237	.	+	.	ID=id6484;Dbxref=GeneID:1100513;gbkey=RBS;gene=SCBAC20F6.15
NC_003888.3	RefSeq	gene	5515243	5516232	.	+	.	ID=gene5125;Dbxref=GeneID:1100514;Name=SCBAC20F6.16;gbkey=Gene;gene=SCBAC20F6.16;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.16;locus_tag=SCO5073
NC_003888.3	RefSeq	CDS	5515243	5516232	.	+	0	ID=cds5025;Parent=gene5125;Dbxref=Genbank:NP_629224.1,GeneID:1100514;Name=NP_629224.1;Note=SCBAC20F6.16%2C ORF2%2C possible oxidoreductase%2C len: 329 aa%3B identical to previously sequenced TR:Q53927 (EMBL:X62373) Streptomyces coelicolor genes for hydroxylacyl-CoA dehydrogenase ORF2%2C 329 aa. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and match to Prosite entry PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=CDS;gene=SCBAC20F6.16;product=oxidoreductase;protein_id=NP_629224.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5515285	5516229	.	+	.	ID=id6485;Dbxref=GeneID:1100514;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 276.60%2C E-value 3.3e-79;gbkey=misc_feature;gene=SCBAC20F6.16
NC_003888.3	RefSeq	sequence_feature	5515669	5515734	.	+	.	ID=id6486;Dbxref=GeneID:1100514;Note=PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=misc_feature;gene=SCBAC20F6.16
NC_003888.3	RefSeq	ribosome_entry_site	5516285	5516290	.	+	.	ID=id6487;gbkey=RBS
NC_003888.3	RefSeq	gene	5516299	5516943	.	+	.	ID=gene5126;Dbxref=GeneID:1100515;Name=SCBAC20F6.17;gbkey=Gene;gene=SCBAC20F6.17;gene_biotype=protein_coding;gene_synonym=SCBAC20F6.17;locus_tag=SCO5074
NC_003888.3	RefSeq	CDS	5516299	5516943	.	+	0	ID=cds5026;Parent=gene5126;Dbxref=Genbank:NP_629225.1,GeneID:1100515;Name=NP_629225.1;Note=SCBAC20F6.17%2C possible dehydratase%2C len: 214 aa%3B identical to previously sequenced TR:Q53928 (EMBL:X62373) Streptomyces coelicolor ORF 3%2C 214 aa. Similar to TR:Q56172 (EMBL:L37334)  dehydratase from granaticin biosynthesis cluster of Streptomyces violaceoruber Tu22 (221 aa) fasta scores%3B opt: 349%2C Z-score: 400.9%2C E(): 1.1e-14%2C 35.465%25 identity (37.195%25 ungapped) in 172 aa overlap.;gbkey=CDS;gene=SCBAC20F6.17;product=dehydratase;protein_id=NP_629225.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5516968	5516971	.	+	.	ID=id6488;gbkey=RBS
NC_003888.3	RefSeq	gene	5516977	5517897	.	+	.	ID=gene5127;Dbxref=GeneID:1100516;Name=ORF4;gbkey=Gene;gene=ORF4;gene_biotype=protein_coding;gene_synonym=ORF4,SCBAC20F6.18,SCBAC28G1.01;locus_tag=SCO5075
NC_003888.3	RefSeq	CDS	5516977	5517897	.	+	0	ID=cds5027;Parent=gene5127;Dbxref=Genbank:NP_733654.1,GeneID:1100516;Name=NP_733654.1;Note=SCBAC28G1.01%2C possible oxidoreductase%2C previously sequenced as ORF4%2C len: 167 aa%3B identical to C-terminal region of previously sequenced TR:Q53929 (EMBL:X62373) Streptomyces coelicolor ORF4%2C 306 aa%3B fasta scores: opt: 1029 Z-score: 1146.7 bits: 219.4 E(): 2.9e-56%3B 95.808%25 identity in 167 aa overlap. Contains match to Prosite entry PS01162 Quinone oxidoreductase / zeta-crystallin signature~SCBAC20F6.18%2C ORF4%2C possible oxidoreductase%2C len: 170 aa%3B identical to N-terminal region of the previously sequenced TR:Q53929 (EMBL:X62373) Streptomyces coelicolor ORF 4%2C 306 aa. Contains match to Prosite entry PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=CDS;gene=ORF4;product=oxidoreductase;protein_id=NP_733654.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5517394	5517910	.	+	.	ID=id6489;Note=previously sequenced DNA fragment. EMBL:X62373 S.coelicolor genes for hydroxyacyl-CoA dehydrogenase;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5517400	5517465	.	+	.	ID=id6490;Dbxref=GeneID:1100516;Note=PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=misc_feature;gene=ORF4
NC_003888.3	RefSeq	sequence_feature	5517876	5523275	.	+	.	ID=id6491;Note=previously sequenced DNA fragment. EMBL:X58833.1 S.coelicolor 6 actVA region genes of the actinorhodin biosynthetic gene cluster;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5517894	5519495	.	+	.	ID=gene5128;Dbxref=GeneID:1100517;Name=actVA1;gbkey=Gene;gene=actVA1;gene_biotype=protein_coding;gene_synonym=actVA1,SCBAC28G1.02;locus_tag=SCO5076
NC_003888.3	RefSeq	CDS	5517894	5519495	.	+	0	ID=cds5028;Parent=gene5128;Dbxref=Genbank:NP_629226.1,GeneID:1100517;Name=NP_629226.1;Note=SCBAC28G1.02%2C actVA1%2C probable integral membrane protein%2C len: 533 aa%3B identical to previously sequenced TR:Q53903 (EMBL:X58833) Streptomyces coelicolor 6 ActVA region genes of the actinorhodin biosynthetic gene cluster%2C ActVA1%2C 533 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=actVA1;product=hypothetical protein;protein_id=NP_629226.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5519485	5519489	.	+	.	ID=id6492;Dbxref=GeneID:1100517;gbkey=RBS;gene=actVA1
NC_003888.3	RefSeq	gene	5519497	5519892	.	+	.	ID=gene5129;Dbxref=GeneID:1100518;Name=actVA2;gbkey=Gene;gene=actVA2;gene_biotype=protein_coding;gene_synonym=actVA2,SCBAC28G1.03;locus_tag=SCO5077
NC_003888.3	RefSeq	CDS	5519497	5519892	.	+	0	ID=cds5029;Parent=gene5129;Dbxref=Genbank:NP_629227.1,GeneID:1100518;Name=NP_629227.1;Note=SCBAC28G1.03%2C actVA2%2C hypothetical protein%2C len: 131 aa%3B identical to previously sequenced TR:Q53904 (EMBL:X58833) Streptomyces coelicolor 6 ActVA region genes of the actinorhodin biosynthetic gene cluster%2C ActVA2%2C 131 aa;gbkey=CDS;gene=actVA2;product=hypothetical protein;protein_id=NP_629227.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5519974	5519978	.	+	.	ID=id6493;gbkey=RBS
NC_003888.3	RefSeq	gene	5519987	5520832	.	+	.	ID=gene5130;Dbxref=GeneID:1100519;Name=actVA3;gbkey=Gene;gene=actVA3;gene_biotype=protein_coding;gene_synonym=actVA3,SCBAC28G1.04;locus_tag=SCO5078
NC_003888.3	RefSeq	CDS	5519987	5520832	.	+	0	ID=cds5030;Parent=gene5130;Dbxref=Genbank:NP_629228.1,GeneID:1100519;Name=NP_629228.1;Note=SCBAC28G1.04%2C actVA3%2C hypothetical protein%2C len: 281 aa%3B identical to previously sequenced TR:Q53905 (EMBL:X58833) Streptomyces coelicolor 6 ActVA region genes of the actinorhodin biosynthetic gene cluster%2C ActVA3%2C 281 aa;gbkey=CDS;gene=actVA3;product=hypothetical protein;protein_id=NP_629228.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5520844	5520849	.	+	.	ID=id6494;gbkey=RBS
NC_003888.3	RefSeq	gene	5520857	5521741	.	+	.	ID=gene5131;Dbxref=GeneID:1100520;Name=actVA4;gbkey=Gene;gene=actVA4;gene_biotype=protein_coding;gene_synonym=actVA4,SCBAC28G1.05;locus_tag=SCO5079
NC_003888.3	RefSeq	CDS	5520857	5521741	.	+	0	ID=cds5031;Parent=gene5131;Dbxref=Genbank:NP_629229.1,GeneID:1100520;Name=NP_629229.1;Note=SCBAC28G1.05%2C actVA4%2C conserved hypothetical protein%2C len: 294 aa%3B identical to previously sequenced TR:Q53906 (EMBL:X58833) Streptomyces coelicolor 6 ActVA region genes of the actinorhodin biosynthetic gene cluster%2C ActVA4%2C 294 aa;gbkey=CDS;gene=actVA4;product=hypothetical protein;protein_id=NP_629229.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5521726	5521729	.	+	.	ID=id6495;Dbxref=GeneID:1100520;gbkey=RBS;gene=actVA4
NC_003888.3	RefSeq	gene	5521738	5522883	.	+	.	ID=gene5132;Dbxref=GeneID:1100521;Name=actVA5;gbkey=Gene;gene=actVA5;gene_biotype=protein_coding;gene_synonym=actVA5,SCBAC28G1.06;locus_tag=SCO5080
NC_003888.3	RefSeq	CDS	5521738	5522883	.	+	0	ID=cds5032;Parent=gene5132;Dbxref=Genbank:NP_629230.1,GeneID:1100521;Name=NP_629230.1;Note=SCBAC28G1.06%2C actVA5%2C possible hydrolase%2C len: 381 aa%3B identical to previously sequenced TR:Q53907 (EMBL:X58833) Streptomyces coelicolor 6 ActVA region genes of the actinorhodin biosynthetic gene cluster%2C ActVA5%2C 381 aa and similar to TR:Q9F0J3 (EMBL:AF218066) Streptomyces arenae hydrolase NcnH%2C 405 aa%3B fasta scores: opt: 1391 Z-score: 1521.5 bits: 290.3 E(): 3.9e-77%3B 56.522%25 identity in 368 aa overlap;gbkey=CDS;gene=actVA5;product=hydrolase;protein_id=NP_629230.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5522863	5522868	.	+	.	ID=id6496;Dbxref=GeneID:1100521;gbkey=RBS;gene=actVA5
NC_003888.3	RefSeq	gene	5522876	5523217	.	+	.	ID=gene5133;Dbxref=GeneID:1100522;Name=actVA6;gbkey=Gene;gene=actVA6;gene_biotype=protein_coding;gene_synonym=actVA6,SCBAC28G1.07;locus_tag=SCO5081
NC_003888.3	RefSeq	CDS	5522876	5523217	.	+	0	ID=cds5033;Parent=gene5133;Dbxref=Genbank:NP_629231.1,GeneID:1100522;Name=NP_629231.1;Note=SCBAC28G1.07%2C actVA6%2C hypothetical protein%2C len: 113 aa%3B identical to previously sequenced TR:Q53908 (EMBL:X58833) Streptomyces coelicolor 6 ActVA region genes of the actinorhodin biosynthetic gene cluster%2C ActVA6%2C 113 aa and similar to SW:TCMH_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin polyketide synthesis hydroxylase TcmH%2C 112 aa%3B fasta scores: opt: 193 Z-score: 247.6 bits: 51.0 E(): 3.5e-06%3B 43.210%25 identity in 81 aa overlap;gbkey=CDS;gene=actVA6;product=hypothetical protein;protein_id=NP_629231.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5522991	5528890	.	+	.	ID=id6497;Note=previously sequenced DNA fragment. EMBL:M64683 Streptomyces coelicolor ORF1-4 (actII) gene%2C complete cds;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5523183	5523962	.	-	.	ID=gene5134;Dbxref=GeneID:1100523;Name=actII-1;gbkey=Gene;gene=actII-1;gene_biotype=protein_coding;gene_synonym=actII-1,SCBAC28G1.08c;locus_tag=SCO5082
NC_003888.3	RefSeq	CDS	5523183	5523962	.	-	0	ID=cds5034;Parent=gene5134;Dbxref=Genbank:NP_629232.1,GeneID:1100523;Name=NP_629232.1;Note=SCBAC28G1.08c%2C actII-1%2C probable transcriptional regulatory protein%2C len: 259 aa%3B identical to previously sequenced TR:Q53901 (EMBL:M64683) Streptomyces coelicolor ORF1-4 (ActII)%2C 259 aa. Contains Pfam matches to entries PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and PF02909 tetR_C%2C Tetracyclin repressor%2C C-terminal all-alpha domain and possible helix-turn-helix motif at residues 53..73 (+2.78 SD);gbkey=CDS;gene=actII-1;product=transcriptional regulator;protein_id=NP_629232.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5523240	5523683	.	-	.	ID=id6498;Dbxref=GeneID:1100523;Note=Pfam match to entry PF02909 tetR_C%2C Tetracyclin repressor%2C C-terminal all-alpha domain%2C score 217.30%2C E-value 2.2e-61;gbkey=misc_feature;gene=actII-1
NC_003888.3	RefSeq	sequence_feature	5523717	5523857	.	-	.	ID=id6499;Dbxref=GeneID:1100523;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 43.50%2C E-value 1.3e-09;gbkey=misc_feature;gene=actII-1
NC_003888.3	RefSeq	ribosome_entry_site	5523968	5523971	.	-	.	ID=id6500;gbkey=RBS
NC_003888.3	RefSeq	gene	5524073	5525809	.	+	.	ID=gene5135;Dbxref=GeneID:1100524;Name=actII-2;gbkey=Gene;gene=actII-2;gene_biotype=protein_coding;gene_synonym=actII-2,SCBAC28G1.09;locus_tag=SCO5083
NC_003888.3	RefSeq	CDS	5524073	5525809	.	+	0	ID=cds5035;Parent=gene5135;Dbxref=Genbank:NP_629233.1,GeneID:1100524;Name=NP_629233.1;Note=SCBAC28G1.09%2C actII-2%2C probable actinorhodin transporter%2C len: 578 aa%3B identical to previously sequenced SW:AC22_STRCO (EMBL:M64683) Streptomyces coelicolor probable actinorhodin transporter ActII-2%2C 578 aa. Contains possible hydrophobic membrane spanning regions and a leucine TTA codon%2C possible target for bldA regulation;gbkey=CDS;gene=actII-2;product=actinorhodin transporter;protein_id=NP_629233.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5524127	5524129	.	+	.	ID=id6501;Dbxref=GeneID:1100524;Note=TTA leucine codon%3B possible target for bldA regulation;gbkey=misc_feature;gene=actII-2
NC_003888.3	RefSeq	gene	5525809	5527944	.	+	.	ID=gene5136;Dbxref=GeneID:1100525;Name=actII-3;gbkey=Gene;gene=actII-3;gene_biotype=protein_coding;gene_synonym=actII-3,SCBAC28G1.10;locus_tag=SCO5084
NC_003888.3	RefSeq	CDS	5525809	5527944	.	+	0	ID=cds5036;Parent=gene5136;Dbxref=Genbank:NP_629234.1,GeneID:1100525;Name=NP_629234.1;Note=SCBAC28G1.10%2C actII-3%2C membrane protein%2C len: 711 aa%3B identical to previously sequenced SW:MMLA_STRCO (EMBL:M64683) Streptomyces coelicolor membrane protein ActII-3%2C 711 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=actII-3;product=hypothetical protein;protein_id=NP_629234.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	5527951	5527993	.	+	.	ID=id6502;Note=possible stem loop. Score 60: 20/20 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	sequence_feature	5527957	5527962	.	+	.	ID=id6503;Note=AseI site matched ATTAAT. Divides the AseI-K and the AseI-N genomic restriction fragments~Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5527957	5527962	.	-	.	ID=id6504;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5527983	5527988	.	+	.	ID=id6505;Note=AseI site matched ATTAAT. Divides the AseI-K and the AseI-N genomic restriction fragments~Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5527983	5527988	.	-	.	ID=id6506;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5528094	5528861	.	+	.	ID=gene5137;Dbxref=GeneID:1100526;Name=actII-4;gbkey=Gene;gene=actII-4;gene_biotype=protein_coding;gene_synonym=actII-4,SCBAC28G1.11;locus_tag=SCO5085
NC_003888.3	RefSeq	CDS	5528094	5528861	.	+	0	ID=cds5037;Parent=gene5137;Dbxref=Genbank:NP_629235.1,GeneID:1100526;Name=NP_629235.1;Note=SCBAC28G1.11%2C actII-4%2C actinorhodin cluster activator protein%2C len: 255 aa%3B identical to previously sequenced SW:AC24_STRCO (EMBL:M64683) Streptomyces coelicolor actinorhodin operon activator protein ActII-4%2C 255 aa. Contains a leucine TTA codon%2C possible target for bldA regulation;gbkey=CDS;gene=actII-4;product=actinorhodin operon activator protein;protein_id=NP_629235.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5528106	5528108	.	+	.	ID=id6507;Dbxref=GeneID:1100526;Note=TTA leucine codon%3B possible target for bldA regulation;gbkey=misc_feature;gene=actII-4
NC_003888.3	RefSeq	sequence_feature	5528795	5529829	.	-	.	ID=id6508;Note=previously sequenced DNA fragment. EMBL:M19536 S.coelicolor actIII gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	stem_loop	5528864	5528928	.	+	.	ID=id6509;Note=possible stem loop. Score 96: 32/32 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5528935	5529720	.	-	.	ID=gene5138;Dbxref=GeneID:1100527;Name=actIII;gbkey=Gene;gene=actIII;gene_biotype=protein_coding;gene_synonym=actIII,SCBAC28G1.12c;locus_tag=SCO5086
NC_003888.3	RefSeq	CDS	5528935	5529720	.	-	0	ID=cds5038;Parent=gene5138;Dbxref=Genbank:NP_629236.1,GeneID:1100527;Name=NP_629236.1;Note=SCBAC28G1.12c%2C actIII%2C ketoacyl reductase%2C len: 261 aa%3B identical to previously sequenced SW:ACT3_STRCO (EMBL:M19536) Streptomyces coelicolor ketoacyl reductase ActIII%2C 261 aa. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=actIII;product=ketoacyl reductase;protein_id=NP_629236.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5528959	5529051	.	-	.	ID=id6510;Dbxref=GeneID:1100527;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 25.80%2C E-value 1.4e-05;gbkey=misc_feature;gene=actIII
NC_003888.3	RefSeq	sequence_feature	5529142	5529702	.	-	.	ID=id6511;Dbxref=GeneID:1100527;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 302.10%2C E-value 6.8e-87;gbkey=misc_feature;gene=actIII
NC_003888.3	RefSeq	sequence_feature	5529205	5529291	.	-	.	ID=id6512;Dbxref=GeneID:1100527;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=actIII
NC_003888.3	RefSeq	ribosome_entry_site	5529792	5529795	.	+	.	ID=id6513;gbkey=RBS
NC_003888.3	RefSeq	gene	5529801	5531204	.	+	.	ID=gene5139;Dbxref=GeneID:1100528;Name=actIORF1;gbkey=Gene;gene=actIORF1;gene_biotype=protein_coding;gene_synonym=actIORF1,SCBAC28G1.13;locus_tag=SCO5087
NC_003888.3	RefSeq	CDS	5529801	5531204	.	+	0	ID=cds5039;Parent=gene5139;Dbxref=Genbank:NP_629237.1,GeneID:1100528;Name=NP_629237.1;Note=SCBAC28G1.13%2C actIORF1%2C actinorhodin polyketide beta-ketoacyl synthase alpha subunit%2C len: 467 aa%3B identical to C-terminal region of SW:KASA_STRCO (EMBL:X63449) Streptomyces coelicolor actinorhodin polyketide beta-ketoacyl synthase 1 ActI ORF1%2C 424 aa. Previously sequenced start codon at residue 44 of this sequence. Also similar to TR:CAB45606 (EMBL:AL079356) Streptomyces coelicolor polyketide beta-ketoacyl synthase alpha (WhiE locus) SC6G9.15%2C 424 aa%3B fasta scores: opt: 1706 Z-score: 1660.2 bits: 316.4 E(): 9.5e-87%3B 61.871%25 identity in 417 aa overlap. Contains Pfam matches to entries PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C N-terminal domain and PF02801 ketoacyl-synt_C%2C Beta-ketoacyl synthase%2C C-terminal domain and match to Prosite entry PS00606 Beta-ketoacyl synthases active site;gbkey=CDS;gene=actIORF1;product=actinorhodin polyketide beta-ketoacyl synthase subunit alpha;protein_id=NP_629237.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5529824	5535109	.	+	.	ID=id6514;Note=previously sequenced DNA fragment. EMBL:X63449 S.coelicolor genes actIORF1%2C actIORF2%2C actIORF3%2C actVII%2C actIV and actVB for beta-ketoacyl synthase/acyl transferase%2C acyl carrier protein%2C cyclase/dehydrase%2C dehydrase and dimerase;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5529933	5530682	.	+	.	ID=id6515;Dbxref=GeneID:1100528;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C N-terminal domain%2C score 310.40%2C E-value 2.2e-89;gbkey=misc_feature;gene=actIORF1
NC_003888.3	RefSeq	sequence_feature	5530407	5530457	.	+	.	ID=id6516;Dbxref=GeneID:1100528;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=actIORF1
NC_003888.3	RefSeq	sequence_feature	5530707	5531183	.	+	.	ID=id6517;Dbxref=GeneID:1100528;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2C Beta-ketoacyl synthase%2C C-terminal domain%2C score 248.10%2C E-value 1.2e-70;gbkey=misc_feature;gene=actIORF1
NC_003888.3	RefSeq	gene	5531201	5532424	.	+	.	ID=gene5140;Dbxref=GeneID:1100529;Name=actIORF2;gbkey=Gene;gene=actIORF2;gene_biotype=protein_coding;gene_synonym=actIORF2,SCBAC28G1.14;locus_tag=SCO5088
NC_003888.3	RefSeq	CDS	5531201	5532424	.	+	0	ID=cds5040;Parent=gene5140;Dbxref=Genbank:NP_629238.1,GeneID:1100529;Name=NP_629238.1;Note=SCBAC28G1.14%2C actIORF2%2C actinorhodin polyketide beta-ketoacyl synthase beta subunit (also known as chain length factor)%2C len: 407 aa%3B identical to previously sequenced SW:KASB_STRCO (EMBL:X63449) Streptomyces coelicolor actinorhodin polyketide beta-ketoacyl synthase 2 ActI ORF2%2C 407 aa. Contains Pfam matches to entries PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C N-terminal domain and PF02801 ketoacyl-synt_C%2C Beta-ketoacyl synthase%2C C-terminal domain;gbkey=CDS;gene=actIORF2;product=actinorhodin polyketide beta-ketoacyl synthase subunit beta;protein_id=NP_629238.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5531201	5531923	.	+	.	ID=id6518;Dbxref=GeneID:1100529;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C N-terminal domain%2C score 279.40%2C E-value 4.5e-80;gbkey=misc_feature;gene=actIORF2
NC_003888.3	RefSeq	sequence_feature	5531951	5532412	.	+	.	ID=id6519;Dbxref=GeneID:1100529;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2C Beta-ketoacyl synthase%2C C-terminal domain%2C score 188.60%2C E-value 1e-52;gbkey=misc_feature;gene=actIORF2
NC_003888.3	RefSeq	ribosome_entry_site	5532439	5532442	.	+	.	ID=id6520;gbkey=RBS
NC_003888.3	RefSeq	gene	5532449	5532709	.	+	.	ID=gene5141;Dbxref=GeneID:1100530;Name=actIORF3;gbkey=Gene;gene=actIORF3;gene_biotype=protein_coding;gene_synonym=actIORF3,SCBAC28G1.15;locus_tag=SCO5089
NC_003888.3	RefSeq	CDS	5532449	5532709	.	+	0	ID=cds5041;Parent=gene5141;Dbxref=Genbank:NP_629239.1,GeneID:1100530;Name=NP_629239.1;Note=SCBAC28G1.15%2C actIORF3%2C actinorhodin polyketide synthase acyl carrier protein%2C len: 86 aa%3B identical to previously sequenced SW:ACPA_STRCO (EMBL:X63449) Streptomyces coelicolor actinorhodin polyketide synthase acyl carrier protein ActI ORF3%2C 86 aa. Contains Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site and match to Prosite entry PS00012 Phosphopantetheine attachment site;gbkey=CDS;gene=actIORF3;product=actinorhodin polyketide synthase;protein_id=NP_629239.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5532482	5532682	.	+	.	ID=id6521;Dbxref=GeneID:1100530;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 68.00%2C E-value 3.4e-17;gbkey=misc_feature;gene=actIORF3
NC_003888.3	RefSeq	sequence_feature	5532557	5532604	.	+	.	ID=id6522;Dbxref=GeneID:1100530;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=actIORF3
NC_003888.3	RefSeq	ribosome_entry_site	5532698	5532701	.	+	.	ID=id6523;Dbxref=GeneID:1100530;gbkey=RBS;gene=actIORF3
NC_003888.3	RefSeq	gene	5532706	5533656	.	+	.	ID=gene5142;Dbxref=GeneID:1100531;Name=actVII;gbkey=Gene;gene=actVII;gene_biotype=protein_coding;gene_synonym=actVII,SCBAC28G1.16;locus_tag=SCO5090
NC_003888.3	RefSeq	CDS	5532706	5533656	.	+	0	ID=cds5042;Parent=gene5142;Dbxref=Genbank:NP_629240.1,GeneID:1100531;Name=NP_629240.1;Note=SCBAC28G1.16%2C actVII%2C actinorhodin polyketide synthase bifunctional cyclase/dehydratase%2C len: 316 aa%3B identical to previously sequenced SW:CYPK_STRCO (EMBL:X63449) Streptomyces coelicolor actinorhodin polyketide synthase bifunctional cyclase/dehydratase ActI ORF4%2C 316 aa;gbkey=CDS;gene=actVII;product=actinorhodin polyketide synthase bifunctional cyclase/dehydratase;protein_id=NP_629240.1;transl_table=11
NC_003888.3	RefSeq	gene	5533653	5534546	.	+	.	ID=gene5143;Dbxref=GeneID:1100532;Name=actIV;gbkey=Gene;gene=actIV;gene_biotype=protein_coding;gene_synonym=actIV,SCBAC28G1.17;locus_tag=SCO5091
NC_003888.3	RefSeq	CDS	5533653	5534546	.	+	0	ID=cds5043;Parent=gene5143;Dbxref=Genbank:NP_629241.1,GeneID:1100532;Name=NP_629241.1;Note=SCBAC28G1.17%2C actIV%2C cyclase%2C len: 297 aa%3B identical to previously sequenced TR:Q02057 (EMBL:X63449) Streptomyces coelicolor dehydrogenase ActI ORF5%2C 297 aa. Contains Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily;gbkey=CDS;gene=actIV;product=cyclase;protein_id=NP_629241.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5533710	5534264	.	+	.	ID=id6524;Dbxref=GeneID:1100532;Note=Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily%2C score 124.60%2C E-value 1.9e-33;gbkey=misc_feature;gene=actIV
NC_003888.3	RefSeq	ribosome_entry_site	5534547	5534550	.	+	.	ID=id6525;gbkey=RBS
NC_003888.3	RefSeq	gene	5534558	5535091	.	+	.	ID=gene5144;Dbxref=GeneID:1100533;Name=actVB;gbkey=Gene;gene=actVB;gene_biotype=protein_coding;gene_synonym=actVB,SCBAC28G1.18;locus_tag=SCO5092
NC_003888.3	RefSeq	CDS	5534558	5535091	.	+	0	ID=cds5044;Parent=gene5144;Dbxref=Genbank:NP_629242.1,GeneID:1100533;Name=NP_629242.1;Note=SCBAC28G1.18%2C actVB%2C actinorhodin polyketide possible dimerase%2C len: 177 aa%3B identical to previously sequenced SW:DIM6_STRCO (EMBL:X63449) Streptomyces coelicolor actinorhodin polyketide dimerase ActI ORF6%2C ActVB%2C 177 aa Contains Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain;gbkey=CDS;gene=actVB;product=actinorhodin polyketide dimerase;protein_id=NP_629242.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5534591	5535031	.	+	.	ID=id6526;Dbxref=GeneID:1100533;Note=Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain%2C score 254.60%2C E-value 1.3e-72;gbkey=misc_feature;gene=actVB
NC_003888.3	RefSeq	sequence_feature	5535079	5539930	.	+	.	ID=id6527;Note=previously sequenced DNA fragment. EMBL:Y18817 Streptomyces coelicolor A3(2) transcriptional regulator and actinorhodin biosynthetic genes%2C strain J1501;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5535110	5535607	.	-	.	ID=gene5145;Dbxref=GeneID:1100534;Name=ORF7;gbkey=Gene;gene=ORF7;gene_biotype=protein_coding;gene_synonym=ORF7,SCBAC28G1.19c;locus_tag=SCO5093
NC_003888.3	RefSeq	CDS	5535110	5535607	.	-	0	ID=cds5045;Parent=gene5145;Dbxref=Genbank:NP_629243.1,GeneID:1100534;Name=NP_629243.1;Note=SCBAC28G1.19c%2C ORF7%2C mini-circle protein%2C len: 165 aa%3B identical to previously sequenced TR:Q9X9V2 (EMBL:Y18817) Streptomyces coelicolor A3(2) mini-circle protein ORF7%2C 165 aa;gbkey=CDS;gene=ORF7;product=mini-circle protein;protein_id=NP_629243.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5535617	5535621	.	-	.	ID=id6528;gbkey=RBS
NC_003888.3	RefSeq	gene	5535661	5536287	.	-	.	ID=gene5146;Dbxref=GeneID:1100535;Name=ORF8;gbkey=Gene;gene=ORF8;gene_biotype=protein_coding;gene_synonym=ORF8,SCBAC28G1.20c;locus_tag=SCO5094
NC_003888.3	RefSeq	CDS	5535661	5536287	.	-	0	ID=cds5046;Parent=gene5146;Dbxref=Genbank:NP_629244.1,GeneID:1100535;Name=NP_629244.1;Note=SCBAC28G1.20c%2C ORF8%2C methyltransferase%2C len: 208 aa%3B identical to previously sequenced TR:Q9X9V1 (EMBL:Y18817) Streptomyces coelicolor A3(2) methyltransferase ORF8%2C 208 aa;gbkey=CDS;gene=ORF8;product=methyltransferase;protein_id=NP_629244.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5536293	5536298	.	-	.	ID=id6529;gbkey=RBS
NC_003888.3	RefSeq	gene	5536422	5536994	.	+	.	ID=gene5147;Dbxref=GeneID:1100536;Name=ORF9;gbkey=Gene;gene=ORF9;gene_biotype=protein_coding;gene_synonym=ORF9,SCBAC28G1.21;locus_tag=SCO5095
NC_003888.3	RefSeq	CDS	5536422	5536994	.	+	0	ID=cds5047;Parent=gene5147;Dbxref=Genbank:NP_629245.1,GeneID:1100536;Name=NP_629245.1;Note=SCBAC28G1.21%2C ORF9%2C probable DNA-binding protein%2C len: 190 aa%3B identical to previously sequenced as TR:Q9X9V0 (EMBL:Y18817) Streptomyces coelicolor A3(2) hypothetical 20.6 kDa protein ORF9%2C 190 aa and similar to TR:O86784 (EMBL:AL031317) Streptomyces coelicolor SC6G4.21%2C 202 aa%3B fasta scores: opt: 642 Z-score: 656.2 bits: 128.2 E(): 7.9e-31%3B 53.968%25 identity in 189 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and possible helix-turn-helix motif at residues 25..46 (+6.01 SD);gbkey=CDS;gene=ORF9;product=DNA-binding protein;protein_id=NP_629245.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5536467	5536631	.	+	.	ID=id6530;Dbxref=GeneID:1100536;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 59.50%2C E-value 7.3e-14;gbkey=misc_feature;gene=ORF9
NC_003888.3	RefSeq	gene	5537246	5538175	.	-	.	ID=gene5148;Dbxref=GeneID:1100537;Name=SCBAC28G1.22c;gbkey=Gene;gene=SCBAC28G1.22c;gene_biotype=protein_coding;gene_synonym=SCBAC28G1.22c;locus_tag=SCO5096
NC_003888.3	RefSeq	CDS	5537246	5538175	.	-	0	ID=cds5048;Parent=gene5148;Dbxref=Genbank:NP_629246.1,GeneID:1100537;Name=NP_629246.1;Note=SCBAC28G1.22c%2C LysR-family transcriptional regulatory protein%2C len: 309 aa%3B identical to previously sequenced TR:Q9X9U9 (EMBL:Y18817) Streptomyces coelicolor A3(2) transcriptional regulator of LysR family%2C 307 aa. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Also contains a possible helix-turn-helix motif at residues 22..43 (+5.22 SD);gbkey=CDS;gene=SCBAC28G1.22c;product=LysR family transcriptional regulator;protein_id=NP_629246.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5537720	5538151	.	-	.	ID=id6531;Dbxref=GeneID:1100537;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 160.50%2C E-value 2.8e-44;gbkey=misc_feature;gene=SCBAC28G1.22c
NC_003888.3	RefSeq	sequence_feature	5538017	5538109	.	-	.	ID=id6532;Dbxref=GeneID:1100537;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCBAC28G1.22c
NC_003888.3	RefSeq	ribosome_entry_site	5538261	5538264	.	+	.	ID=id6533;gbkey=RBS
NC_003888.3	RefSeq	gene	5538270	5539100	.	+	.	ID=gene5149;Dbxref=GeneID:1100538;Name=SCBAC28G1.23;gbkey=Gene;gene=SCBAC28G1.23;gene_biotype=protein_coding;gene_synonym=SCBAC28G1.23;locus_tag=SCO5097
NC_003888.3	RefSeq	CDS	5538270	5539100	.	+	0	ID=cds5049;Parent=gene5149;Dbxref=Genbank:NP_629247.1,GeneID:1100538;Name=NP_629247.1;Note=SCBAC28G1.23%2C short-chain oxidoreductase%2C len: 276 aa%3B identical to previously sequenced TR:Q9X9U8 (EMBL:Y18817) Streptomyces coelicolor A3(2) oxidoreductase of short-chain%2C 276 aa. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCBAC28G1.23;product=short-chain oxidoreductase;protein_id=NP_629247.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5538276	5538821	.	+	.	ID=id6534;Dbxref=GeneID:1100538;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 211.20%2C E-value 1.6e-59;gbkey=misc_feature;gene=SCBAC28G1.23
NC_003888.3	RefSeq	sequence_feature	5538672	5538758	.	+	.	ID=id6535;Dbxref=GeneID:1100538;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCBAC28G1.23
NC_003888.3	RefSeq	gene	5539158	5539622	.	+	.	ID=gene5150;Dbxref=GeneID:1100539;Name=ORF12;gbkey=Gene;gene=ORF12;gene_biotype=protein_coding;gene_synonym=ORF12,SCBAC28G1.24;locus_tag=SCO5098
NC_003888.3	RefSeq	CDS	5539158	5539622	.	+	0	ID=cds5050;Parent=gene5150;Dbxref=Genbank:NP_629248.1,GeneID:1100539;Name=NP_629248.1;Note=SCBAC28G1.24%2C possible integral membrane protein%2C len: 154 aa%3B identical in its C-terminal domain to TR:Q9X9U7 (EMBL:Y18817) Streptomyces coelicolor A3(2) hypothetical 11.9 kDa protein ORF11%2C 113 aa. Contains possible hydrophobic membrane spanning regions and 10x degenerate repeat at N-terminal region: M(P/V). Alternative start codon in previously sequence EMBL entrance after the repeat region at residue 42;gbkey=CDS;gene=ORF12;product=hypothetical protein;protein_id=NP_629248.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5539191	5539250	.	+	.	ID=id6536;Dbxref=GeneID:1100539;Note=10x degenerate repeat translated in SCBAC28G1.24;gbkey=repeat_region;gene=ORF12
NC_003888.3	RefSeq	gene	5539732	5540862	.	+	.	ID=gene5151;Dbxref=GeneID:1100540;Name=SCBAC28G1.25;gbkey=Gene;gene=SCBAC28G1.25;gene_biotype=protein_coding;gene_synonym=SCBAC28G1.25;locus_tag=SCO5099
NC_003888.3	RefSeq	CDS	5539732	5540862	.	+	0	ID=cds5051;Parent=gene5151;Dbxref=Genbank:NP_629249.1,GeneID:1100540;Name=NP_629249.1;Note=SCBAC28G1.25%2C possible membrane protein%2C len: 376 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC28G1.25;product=hypothetical protein;protein_id=NP_629249.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5541000	5541003	.	+	.	ID=id6537;gbkey=RBS
NC_003888.3	RefSeq	gene	5541010	5541762	.	+	.	ID=gene5152;Dbxref=GeneID:1100541;Name=SCBAC28G1.26;gbkey=Gene;gene=SCBAC28G1.26;gene_biotype=protein_coding;gene_synonym=SCBAC28G1.26;locus_tag=SCO5100
NC_003888.3	RefSeq	CDS	5541010	5541762	.	+	0	ID=cds5052;Parent=gene5152;Dbxref=Genbank:NP_629250.1,GeneID:1100541;Name=NP_629250.1;Note=SCBAC28G1.26%2C possible gntR-family regulatory protein%2C len: 250 aa%3B low similarity to SW:FARR_ECOLI (EMBL:X15790) Escherichia coli fatty acid responsive regulator (P30 protein) FarR%2C 240 aa%3B fasta scores: opt: 206 Z-score: 237.6 bits: 51.4 E(): 1.3e-05%3B 25.926%25 identity in 243 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCBAC28G1.26;product=GntR family transcriptional regulator;protein_id=NP_629250.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5541043	5541222	.	+	.	ID=id6538;Dbxref=GeneID:1100541;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 50.40%2C E-value 5.3e-14;gbkey=misc_feature;gene=SCBAC28G1.26
NC_003888.3	RefSeq	ribosome_entry_site	5542197	5542201	.	+	.	ID=id6539;gbkey=RBS
NC_003888.3	RefSeq	gene	5542208	5542399	.	+	.	ID=gene5153;Dbxref=GeneID:1100542;Name=SCBAC28G1.27;gbkey=Gene;gene=SCBAC28G1.27;gene_biotype=protein_coding;gene_synonym=SCBAC28G1.27;locus_tag=SCO5101
NC_003888.3	RefSeq	CDS	5542208	5542399	.	+	0	ID=cds5053;Parent=gene5153;Dbxref=Genbank:NP_629251.1,GeneID:1100542;Name=NP_629251.1;Note=SCBAC28G1.27%2C conserved hypothetical protein%2C len: 63 aa%3B similar to TR:Q9HTF6 (EMBL:AE004953) Pseudomonas aeruginosa hypothetical protein PA5408%2C 58 aa%3B fasta scores: opt: 146 Z-score: 225.2 bits: 45.1 E(): 6.2e-05%3B 45.652%25 identity in 46 aa overlap;gbkey=CDS;gene=SCBAC28G1.27;product=hypothetical protein;protein_id=NP_629251.1;transl_table=11
NC_003888.3	RefSeq	gene	5542475	5542909	.	+	.	ID=gene5154;Dbxref=GeneID:1100543;Name=SCBAC28G1.28;gbkey=Gene;gene=SCBAC28G1.28;gene_biotype=protein_coding;gene_synonym=SCBAC28G1.28;locus_tag=SCO5102
NC_003888.3	RefSeq	CDS	5542475	5542909	.	+	0	ID=cds5054;Parent=gene5154;Dbxref=Genbank:NP_629252.1,GeneID:1100543;Name=NP_629252.1;Note=SCBAC28G1.28%2C possible mutT-like protein%2C len: 144 aa%3B similar to SW:MUTT_ECOLI (EMBL:X04831) Escherichia coli mutator MutT protein (7%2C8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.*) MutT%2C 129 aa%3B fasta scores: opt: 190 Z-score: 228.6 bits: 48.1 E(): 4e-05%3B 33.333%25 identity in 132 aa overlap. Contains Pfam match to entry PF00293 mutT%2C MutT-like domain and match to Prosite entry PS00893 mutT domain signature;gbkey=CDS;gene=SCBAC28G1.28;product=mutT-like protein;protein_id=NP_629252.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5542481	5542861	.	+	.	ID=id6540;Dbxref=GeneID:1100543;Note=Pfam match to entry PF00293 mutT%2C MutT-like domain%2C score 85.50%2C E-value 1.1e-21;gbkey=misc_feature;gene=SCBAC28G1.28
NC_003888.3	RefSeq	sequence_feature	5542583	5542642	.	+	.	ID=id6541;Dbxref=GeneID:1100543;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SCBAC28G1.28
NC_003888.3	RefSeq	gene	5542948	5543415	.	+	.	ID=gene5155;Dbxref=GeneID:1100544;Name=SCBAC28G1.29;gbkey=Gene;gene=SCBAC28G1.29;gene_biotype=protein_coding;gene_synonym=SCBAC28G1.29;locus_tag=SCO5103
NC_003888.3	RefSeq	CDS	5542948	5543415	.	+	0	ID=cds5055;Parent=gene5155;Dbxref=Genbank:NP_629253.1,GeneID:1100544;Name=NP_629253.1;Note=SCBAC28G1.29%2C possible regulatory protein%2C len: 155 aa%3B similar to TR:Q53897 (EMBL:X60316) Streptomyces coelicolor AbaA gene (regulator) or SCF42.12c%2C 192 aa%3B fasta scores: opt: 207 Z-score: 233.7 bits: 49.7 E(): 2.1e-05%3B 41.270%25 identity in 126 aa overlap. Contains Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase;gbkey=CDS;gene=SCBAC28G1.29;product=regulatory protein;protein_id=NP_629253.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5543095	5543262	.	+	.	ID=id6542;Dbxref=GeneID:1100544;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase%2C score 10.00%2C E-value 0.22;gbkey=misc_feature;gene=SCBAC28G1.29
NC_003888.3	RefSeq	ribosome_entry_site	5543699	5543703	.	+	.	ID=id6543;gbkey=RBS
NC_003888.3	RefSeq	gene	5543715	5546357	.	+	.	ID=gene5156;Dbxref=GeneID:1100545;Name=SCBAC28G1.30;gbkey=Gene;gene=SCBAC28G1.30;gene_biotype=protein_coding;gene_synonym=SCBAC28G1.30;locus_tag=SCO5104
NC_003888.3	RefSeq	CDS	5543715	5546357	.	+	0	ID=cds5056;Parent=gene5156;Dbxref=Genbank:NP_629254.1,GeneID:1100545;Name=NP_629254.1;Note=SCBAC28G1.30%2C hypothetical protein%2C len: 880 aa%3B similar to many Streptomyces coelicolor hypothetical proteins%2C e.g. TR:Q9KYN1 (EMBL:AL356592) hypothetical 84.7 kDa protein SC9H11.08%2C 802 aa%3B fasta scores: opt: 1062 Z-score: 1155.9 bits: 224.9 E(): 9.1e-57%3B 38.902%25 identity in 856 aa overlap. Contains 2x Pfam matches%2C Pfam match to entry PF01590 GAF%2C GAF domain%2C to entry PF00989 PAS%2C PAS domain and to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase;gbkey=CDS;gene=SCBAC28G1.30;product=hypothetical protein;protein_id=NP_629254.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5543841	5544011	.	+	.	ID=id6544;Dbxref=GeneID:1100545;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 9.80%2C E-value 0.44;gbkey=misc_feature;gene=SCBAC28G1.30
NC_003888.3	RefSeq	sequence_feature	5544246	5544440	.	+	.	ID=id6545;Dbxref=GeneID:1100545;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 15.70%2C E-value 0.0098;gbkey=misc_feature;gene=SCBAC28G1.30
NC_003888.3	RefSeq	sequence_feature	5544681	5545142	.	+	.	ID=id6546;Dbxref=GeneID:1100545;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 42.60%2C E-value 8.6e-09;gbkey=misc_feature;gene=SCBAC28G1.30
NC_003888.3	RefSeq	sequence_feature	5546058	5546162	.	+	.	ID=id6547;Dbxref=GeneID:1100545;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase%2C score 9.60%2C E-value 0.28;gbkey=misc_feature;gene=SCBAC28G1.30
NC_003888.3	RefSeq	ribosome_entry_site	5546587	5546591	.	+	.	ID=id6548;gbkey=RBS
NC_003888.3	RefSeq	gene	5546599	5547831	.	+	.	ID=gene5157;Dbxref=GeneID:1100546;Name=SCBAC31E11.01;gbkey=Gene;gene=SCBAC31E11.01;gene_biotype=protein_coding;gene_synonym=SCBAC31E11.01;locus_tag=SCO5105
NC_003888.3	RefSeq	CDS	5546599	5547831	.	+	0	ID=cds5057;Parent=gene5157;Dbxref=Genbank:NP_629255.1,GeneID:1100546;Name=NP_629255.1;Note=SCBAC31E11.01%2C possible membrane protein%2C len: 410 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCBAC31E11.01;product=hypothetical protein;protein_id=NP_629255.1;transl_table=11
NC_003888.3	RefSeq	gene	5547828	5548607	.	-	.	ID=gene5158;Dbxref=GeneID:1100547;Name=SCBAC31E11.02c;gbkey=Gene;gene=SCBAC31E11.02c;gene_biotype=protein_coding;gene_synonym=SCBAC31E11.02c,shdB2;locus_tag=SCO5106
NC_003888.3	RefSeq	CDS	5547828	5548607	.	-	0	ID=cds5058;Parent=gene5158;Dbxref=Genbank:NP_629256.1,GeneID:1100547;Name=NP_629256.1;Note=catalyzes the fumarate and succinate interconversion%3B fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source;gbkey=CDS;gene=SCBAC31E11.02c;product=fumarate reductase iron-sulfur subunit;protein_id=NP_629256.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5548368	5548550	.	-	.	ID=id6549;Dbxref=GeneID:1100547;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 35.00%2C E-value 1.7e-06;gbkey=misc_feature;gene=SCBAC31E11.02c
NC_003888.3	RefSeq	gene	5548604	5550565	.	-	.	ID=gene5159;Dbxref=GeneID:1100548;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;gene_synonym=SCBAC31E11.02c,shdA2;locus_tag=SCO5107
NC_003888.3	RefSeq	CDS	5548604	5550565	.	-	0	ID=cds5059;Parent=gene5159;Dbxref=Genbank:NP_629257.1,GeneID:1100548;Name=NP_629257.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=NP_629257.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5548618	5548622	.	-	.	ID=id6550;Dbxref=GeneID:1100548;gbkey=RBS;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	5548769	5549083	.	-	.	ID=id6551;Dbxref=GeneID:1100548;Note=Pfam match to entry PF02910 succ_DH_flav_C%2C Fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain%2C score 69.20%2C E-value 8.9e-17;gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	5549162	5550238	.	-	.	ID=id6552;Dbxref=GeneID:1100548;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 404.30%2C E-value 1.2e-117;gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	sequence_feature	5549921	5549944	.	-	.	ID=id6553;Dbxref=GeneID:1100548;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=sdhA
NC_003888.3	RefSeq	ribosome_entry_site	5550573	5550576	.	-	.	ID=id6554;gbkey=RBS
NC_003888.3	RefSeq	gene	5550582	5551418	.	-	.	ID=gene5160;Dbxref=GeneID:1100549;Name=SCBAC31E11.04c;gbkey=Gene;gene=SCBAC31E11.04c;gene_biotype=protein_coding;gene_synonym=SCBAC31E11.04c;locus_tag=SCO5108
NC_003888.3	RefSeq	CDS	5550582	5551418	.	-	0	ID=cds5060;Parent=gene5160;Dbxref=Genbank:NP_629258.1,GeneID:1100549;Name=NP_629258.1;Note=SCBAC31E11.04c%2C possible integral membrane protein%2C len: 278 aa%3B similar to TR:O53671 (EMBL:AL021929) Mycobacterium tuberculosis hypothetical 31.1 kDa protein MTV034.15c%2C 273 aa%3B fasta scores: opt: 1010 Z-score: 1230.3 bits: 235.4 E(): 6.5e-61%3B 54.545%25 identity in 275 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC31E11.04c;product=hypothetical protein;protein_id=NP_629258.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5551426	5551429	.	-	.	ID=id6555;gbkey=RBS
NC_003888.3	RefSeq	gene	5551480	5551920	.	-	.	ID=gene5161;Dbxref=GeneID:1100550;Name=SCBAC31E11.05c;gbkey=Gene;gene=SCBAC31E11.05c;gene_biotype=protein_coding;gene_synonym=SCBAC31E11.05c;locus_tag=SCO5109
NC_003888.3	RefSeq	CDS	5551480	5551920	.	-	0	ID=cds5061;Parent=gene5161;Dbxref=Genbank:NP_629259.1,GeneID:1100550;Name=NP_629259.1;Note=SCBAC31E11.05c%2C unknown%2C len: 146 aa. Contains a possible coiled-coil region at approx. residues 60..87;gbkey=CDS;gene=SCBAC31E11.05c;product=hypothetical protein;protein_id=NP_629259.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5552080	5552085	.	+	.	ID=id6556;gbkey=RBS
NC_003888.3	RefSeq	gene	5552093	5554408	.	+	.	ID=gene5162;Dbxref=GeneID:1100551;Name=SCBAC31E11.06;gbkey=Gene;gene=SCBAC31E11.06;gene_biotype=protein_coding;gene_synonym=SCBAC31E11.06;locus_tag=SCO5110
NC_003888.3	RefSeq	CDS	5552093	5554408	.	+	0	ID=cds5062;Parent=gene5162;Dbxref=Genbank:NP_629260.1,GeneID:1100551;Name=NP_629260.1;Note=SCBAC31E11.06%2C possible lipoprotein%2C len: 771 aa%3B similar to SW:YC80_MYCTU (EMBL:Z77137) Mycobacterium tuberculosis hypothetical 63.5 kDa protein MTCY50.02%2C 591 aa%3B fasta scores: opt: 565 Z-score: 501.6 bits: 103.2 E(): 2.5e-20%3B 26.190%25 identity in 756 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC31E11.06;product=lipoprotein;protein_id=NP_629260.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5552153	5552185	.	+	.	ID=id6557;Dbxref=GeneID:1100551;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCBAC31E11.06
NC_003888.3	RefSeq	sequence_feature	5553476	5553553	.	+	.	ID=id6558;Dbxref=GeneID:1100551;Note=high content in lysine%2C glutamic acid and aspartic acid amino acid residues;gbkey=misc_feature;gene=SCBAC31E11.06
NC_003888.3	RefSeq	sequence_feature	5553593	5553712	.	+	.	ID=id6559;Dbxref=GeneID:1100551;Note=high content in aspartic acid%2C asparagine%2C glycine and lysine amino acid residues;gbkey=misc_feature;gene=SCBAC31E11.06
NC_003888.3	RefSeq	ribosome_entry_site	5554527	5554530	.	+	.	ID=id6560;gbkey=RBS
NC_003888.3	RefSeq	gene	5554541	5556448	.	+	.	ID=gene5163;Dbxref=GeneID:1100552;Name=SCBAC31E11.07;gbkey=Gene;gene=SCBAC31E11.07;gene_biotype=protein_coding;gene_synonym=SCBAC31E11.07;locus_tag=SCO5111
NC_003888.3	RefSeq	CDS	5554541	5556448	.	+	0	ID=cds5063;Parent=gene5163;Dbxref=Genbank:NP_629261.1,GeneID:1100552;Name=NP_629261.1;Note=SCBAC31E11.07%2C possible GTP-binding protein%2C len: 635 aa%3B similar to SW:TYPA_ECOLI (EMBL:L19201) Escherichia coli GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A) TypA or BipA or B3871%2C 591 aa%3B fasta scores: opt: 915 Z-score: 968.6 bits: 189.3 E(): 2.5e-46%3B 48.039%25 identity in 612 aa overlap. Contains Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00301 GTP-binding elongation factors signature;gbkey=CDS;gene=SCBAC31E11.07;product=GTP-binding protein;protein_id=NP_629261.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5554553	5555803	.	+	.	ID=id6561;Dbxref=GeneID:1100552;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family%2C score 320.10%2C E-value 2.7e-92;gbkey=misc_feature;gene=SCBAC31E11.07
NC_003888.3	RefSeq	sequence_feature	5554580	5554603	.	+	.	ID=id6562;Dbxref=GeneID:1100552;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC31E11.07
NC_003888.3	RefSeq	sequence_feature	5554682	5554729	.	+	.	ID=id6563;Dbxref=GeneID:1100552;Note=PS00301 GTP-binding elongation factors signature;gbkey=misc_feature;gene=SCBAC31E11.07
NC_003888.3	RefSeq	stem_loop	5556457	5556513	.	+	.	ID=id6564;Note=possible stem loop. Score 64: 24/26 (92%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	sequence_feature	5556929	5563308	.	+	.	ID=id6565;Note=previously sequenced DNA fragment. EMBL:U68036 Streptomyces coelicolor bldKA%2C bldKB%2C bldKC%2C and bldkD genes%2C complete cds%2C and bldkE gene%2C partial cds;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5557355	5558386	.	+	.	ID=gene5164;Dbxref=GeneID:1100553;Name=bldKA;gbkey=Gene;gene=bldKA;gene_biotype=protein_coding;gene_synonym=bldKA,SCBAC31E11.08;locus_tag=SCO5112
NC_003888.3	RefSeq	CDS	5557355	5558386	.	+	0	ID=cds5064;Parent=gene5164;Dbxref=Genbank:NP_629262.1,GeneID:1100553;Name=NP_629262.1;Note=SCBAC31E11.08%2C bldKA%2C possible ABC transport system integral membrane protein%2C len: 343 aa%3B identical to previously sequenced TR:P72406 (EMBL:U68036) Streptomyces coelicolor BldKA%2C 335 aa. Methionine start codon 9 amino acids upstream from the previous sequence start%3B possible frameshift from frame 2 into frame 1 in the previously sequenced DNA. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=bldKA;product=ABC transporter integral membrane protein BldKA;protein_id=NP_629262.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5558033	5558263	.	+	.	ID=id6566;Dbxref=GeneID:1100553;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 51.00%2C E-value 2.6e-11;gbkey=misc_feature;gene=bldKA
NC_003888.3	RefSeq	sequence_feature	5558036	5558122	.	+	.	ID=id6567;Dbxref=GeneID:1100553;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=bldKA
NC_003888.3	RefSeq	gene	5558498	5560300	.	+	.	ID=gene5165;Dbxref=GeneID:1100554;Name=bldKB;gbkey=Gene;gene=bldKB;gene_biotype=protein_coding;gene_synonym=bldKB,SCBAC31E11.09;locus_tag=SCO5113
NC_003888.3	RefSeq	CDS	5558498	5560300	.	+	0	ID=cds5065;Parent=gene5165;Dbxref=Genbank:NP_629263.1,GeneID:1100554;Name=NP_629263.1;Note=SCBAC31E11.09%2C bldKB%2C possible ABC transport system lipoprotein%2C len: 600 aa%3B almost identical to TR:P72407 (EMBL:U68036) Streptomyces coelicolor BldKB%2C 602 aa. Contains 4x Pfam matches to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=bldKB;product=ABC transporter lipoprotein BldKB;protein_id=NP_629263.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5558543	5558575	.	+	.	ID=id6568;Dbxref=GeneID:1100554;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=bldKB
NC_003888.3	RefSeq	sequence_feature	5558546	5558635	.	+	.	ID=id6569;Dbxref=GeneID:1100554;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 1.40%2C E-value 13;gbkey=misc_feature;gene=bldKB
NC_003888.3	RefSeq	sequence_feature	5558897	5558965	.	+	.	ID=id6570;Dbxref=GeneID:1100554;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 5.20%2C E-value 1.2;gbkey=misc_feature;gene=bldKB
NC_003888.3	RefSeq	sequence_feature	5559131	5559322	.	+	.	ID=id6571;Dbxref=GeneID:1100554;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 19.80%2C E-value 9.6e-05;gbkey=misc_feature;gene=bldKB
NC_003888.3	RefSeq	sequence_feature	5559281	5559304	.	+	.	ID=id6572;Dbxref=GeneID:1100554;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=bldKB
NC_003888.3	RefSeq	sequence_feature	5559584	5560291	.	+	.	ID=id6573;Dbxref=GeneID:1100554;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 8.50%2C E-value 0.13;gbkey=misc_feature;gene=bldKB
NC_003888.3	RefSeq	gene	5560414	5561391	.	+	.	ID=gene5166;Dbxref=GeneID:1100555;Name=bldKC;gbkey=Gene;gene=bldKC;gene_biotype=protein_coding;gene_synonym=bldKC,SCBAC31E11.10;locus_tag=SCO5114
NC_003888.3	RefSeq	CDS	5560414	5561391	.	+	0	ID=cds5066;Parent=gene5166;Dbxref=Genbank:NP_629264.1,GeneID:1100555;Name=NP_629264.1;Note=SCBAC31E11.10%2C bldKC%2C possible ABC transport system integral membrane protein%2C len: 325 aa%3B almost identical to previously sequenced TR:P72408 (EMBL:U68036) Streptomyces coelicolor BldKC%2C 323 aa. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=bldKC;product=ABC transporter integral membrane protein BldKC;protein_id=NP_629264.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5561056	5561271	.	+	.	ID=id6574;Dbxref=GeneID:1100555;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 25.30%2C E-value 0.0015;gbkey=misc_feature;gene=bldKC
NC_003888.3	RefSeq	ribosome_entry_site	5561390	5561394	.	+	.	ID=id6575;gbkey=RBS
NC_003888.3	RefSeq	gene	5561402	5562463	.	+	.	ID=gene5167;Dbxref=GeneID:1100556;Name=bldKD;gbkey=Gene;gene=bldKD;gene_biotype=protein_coding;gene_synonym=bldKD,SCBAC31E11.11;locus_tag=SCO5115
NC_003888.3	RefSeq	CDS	5561402	5562463	.	+	0	ID=cds5067;Parent=gene5167;Dbxref=Genbank:NP_629265.1,GeneID:1100556;Name=NP_629265.1;Note=SCBAC31E11.11%2C bldKD%2C ABC transporter intracellular ATPase subunit%2C len: 353 aa%3B almost identical to previously sequenced TR:P72409 (EMBL:U680360) Streptomyces coelicolor BldKD ABC transporter intracellular ATPase subunit%2C 353 aa and similar to TR:O86574 (EMBL:AL031184) Streptomyces coelicolor SC2A11.13%2C 366 aa%3B fasta scores: opt: 1427 Z-score: 1344.1 bits: 257.3 E(): 3.8e-69%3B 60.340%25 identity in 353 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=bldKD;product=ABC transporter intracellular ATPase subunit BldKD;protein_id=NP_629265.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5561546	5562139	.	+	.	ID=id6576;Dbxref=GeneID:1100556;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 208.90%2C E-value 7.7e-59;gbkey=misc_feature;gene=bldKD
NC_003888.3	RefSeq	sequence_feature	5561567	5561590	.	+	.	ID=id6577;Dbxref=GeneID:1100556;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=bldKD
NC_003888.3	RefSeq	sequence_feature	5561909	5561953	.	+	.	ID=id6578;Dbxref=GeneID:1100556;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=bldKD
NC_003888.3	RefSeq	gene	5562491	5563636	.	+	.	ID=gene5168;Dbxref=GeneID:1100557;Name=bldKE;gbkey=Gene;gene=bldKE;gene_biotype=protein_coding;gene_synonym=bldKE,SC9E12.01,SCBAC31E11.12;locus_tag=SCO5116
NC_003888.3	RefSeq	CDS	5562491	5563636	.	+	0	ID=cds5068;Parent=gene5168;Dbxref=Genbank:NP_733655.1,GeneID:1100557;Name=NP_733655.1;Note=SC9E12.01%2C probable peptide transport system ATP-binding protein (fragment)%2C len: >142 aa%3B similar to SW:OPPF_ECOLI (EMBL:AE000223) Escherichia coli oligopeptide transport protein ATP-binding protein OppF%2C 334 aa%3B fasta scores: opt: 344 z-score: 423.0 E(): 4.3e-16%3B 56.5%25 identity in 92 aa overlap and to TR:O86575 (EMBL:AL031184) Streptomyces coelicolor oligopeptide ABC transporter ATP-binding protein SC2A11.14%2C 496 aa%3B fasta scores: opt: 488 z-score: 576.6 E(): 1.7e-26%3B 56.6%25 identity in 136 aa overlap~SCBAC31E11.12%2C bldKE%2C ABC transporter intracellular ATPase subunit (fragment)%2C len: >272 aa%3B almost identical to previously sequenced TR:P72410 (EMBL:U68036) Streptomyces coelicolor ABC transporter intracellular ATPase subunit (fragment) BldKE%2C 284 aa and similar to N-terminal region of TR:O86575 (EMBL:AL031184) Streptomyces coelicolor SC2A11.14%2C 497 aa%3B fasta scores: opt: 1186 Z-score: 1170.6 bits: 225.2 E(): 1.7e-59%3B 63.603%25 identity in 272 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=bldKE;product=peptide transport system ATP-binding subunit;protein_id=NP_733655.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5562680	5563252	.	+	.	ID=id6579;Dbxref=GeneID:1100557;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 192.00%2C E-value 9.3e-54;gbkey=misc_feature;gene=bldKE
NC_003888.3	RefSeq	sequence_feature	5562701	5562724	.	+	.	ID=id6580;Dbxref=GeneID:1100557;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=bldKE
NC_003888.3	RefSeq	sequence_feature	5563022	5563066	.	+	.	ID=id6581;Dbxref=GeneID:1100557;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=bldKE
NC_003888.3	RefSeq	stem_loop	5563653	5563695	.	+	.	ID=id6582;Note=possible stem loop. Score 57: 19/19 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	5563824	5563829	.	+	.	ID=id6583;gbkey=RBS
NC_003888.3	RefSeq	gene	5563836	5565470	.	+	.	ID=gene5169;Dbxref=GeneID:1100558;Name=SC9E12.02;gbkey=Gene;gene=SC9E12.02;gene_biotype=protein_coding;gene_synonym=SC9E12.02;locus_tag=SCO5117
NC_003888.3	RefSeq	CDS	5563836	5565470	.	+	0	ID=cds5069;Parent=gene5169;Dbxref=Genbank:NP_629266.1,GeneID:1100558;Name=NP_629266.1;Note=SC9E12.02%2C possible peptide transport system  peptide-binding protein%2C len: 544 aa%3B similar to SW:OPPA_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide-binding protein OppA precursor%2C 545 aa%3B fasta scores: opt: 648 z-score: 642.6 E(): 2.5e-28%3B 26.1%25 identity in 552 aa overlap and to TR:P72407 (EMBL:U68036) Streptomyces coelicolor SpoOKA homologue BldKB%2C 602 aa%3B blastp scores: Score %3D 165 (58.1 bits)%2C Expect %3D 2.9e-10%2C Sum P(2) %3D 2.9e-10%3B Identities %3D 116/502 (23%25)%2C Positives %3D 202/502 (40%25). Contains 2x Pfam matches to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5 and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC9E12.02;product=peptide transport system peptide-binding protein;protein_id=NP_629266.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5563872	5563904	.	+	.	ID=id6584;Dbxref=GeneID:1100558;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC9E12.02
NC_003888.3	RefSeq	sequence_feature	5563986	5564969	.	+	.	ID=id6585;Dbxref=GeneID:1100558;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 85.80%2C E-value 3.8e-23;gbkey=misc_feature;gene=SC9E12.02
NC_003888.3	RefSeq	sequence_feature	5565159	5565464	.	+	.	ID=id6586;Dbxref=GeneID:1100558;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 38.20%2C E-value 7.2e-10;gbkey=misc_feature;gene=SC9E12.02
NC_003888.3	RefSeq	ribosome_entry_site	5565469	5565472	.	+	.	ID=id6587;gbkey=RBS
NC_003888.3	RefSeq	gene	5565480	5566403	.	+	.	ID=gene5170;Dbxref=GeneID:1100559;Name=SC9E12.03;gbkey=Gene;gene=SC9E12.03;gene_biotype=protein_coding;gene_synonym=SC9E12.03;locus_tag=SCO5118
NC_003888.3	RefSeq	CDS	5565480	5566403	.	+	0	ID=cds5070;Parent=gene5170;Dbxref=Genbank:NP_629267.1,GeneID:1100559;Name=NP_629267.1;Note=SC9E12.03%2C probable peptide transport system integral membrane protein%2C len: 307 aa%3B similar to TR: SW:OPPB_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport system permease OppB%2C 311 aa%3B fasta scores: opt: 688 z-score: 788.7 E(): 0%3B 36.0%25 identity in 308 aa overlap and to TR:P72408 (EMBL:U68036) Streptomyces coelicolor SpoOKC homologue BldKC%2C 323 aa%3B blastp scores: Score %3D 354 (124.6 bits)%2C Expect %3D 1.9e-32%2C P %3D 1.9e-32%3B Identities %3D 82/235 (34%25)%2C Positives %3D 138/235 (58%25). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9E12.03;product=peptide transport system integral membrane protein;protein_id=NP_629267.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5566068	5566283	.	+	.	ID=id6588;Dbxref=GeneID:1100559;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 24.20%2C E-value 0.0031;gbkey=misc_feature;gene=SC9E12.03
NC_003888.3	RefSeq	gene	5566459	5567376	.	+	.	ID=gene5171;Dbxref=GeneID:1100560;Name=SC9E12.04;gbkey=Gene;gene=SC9E12.04;gene_biotype=protein_coding;gene_synonym=SC9E12.04;locus_tag=SCO5119
NC_003888.3	RefSeq	CDS	5566459	5567376	.	+	0	ID=cds5071;Parent=gene5171;Dbxref=Genbank:NP_629268.1,GeneID:1100560;Name=NP_629268.1;Note=SC9E12.04%2C probable peptide transport system integral membrane protein%2C len: 305 aa%3B similar to SW:OPPC_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport system permease OppC%2C 305 aa%3B fasta scores: opt: 670 z-score: 745.0 E(): 0%3B 35.5%25 identity in 296 aa overlap and to TR:P72406 (EMBL:U68036) Streptomyces coelicolor SpoOKB homologue BldKA%2C 335 aa%3B blastp scores: Score %3D 382 (134.5 bits)%2C Expect %3D 9.1e-41%2C Sum P(2) %3D 9.1e-41%3B Identities %3D 88/231 (38%25)%2C Positives %3D 134/231 (58%25). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9E12.04;product=peptide transport system integral membrane protein;protein_id=NP_629268.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5567026	5567256	.	+	.	ID=id6589;Dbxref=GeneID:1100560;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 21.60%2C E-value 0.018;gbkey=misc_feature;gene=SC9E12.04
NC_003888.3	RefSeq	gene	5567385	5568368	.	+	.	ID=gene5172;Dbxref=GeneID:1100561;Name=SC9E12.05;gbkey=Gene;gene=SC9E12.05;gene_biotype=protein_coding;gene_synonym=SC9E12.05;locus_tag=SCO5120
NC_003888.3	RefSeq	CDS	5567385	5568368	.	+	0	ID=cds5072;Parent=gene5172;Dbxref=Genbank:NP_629269.1,GeneID:1100561;Name=NP_629269.1;Note=SC9E12.05%2C probable peptide transport system ATP-binding protein%2C len: 327 aa%3B similar to SW:OPPD_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport system ATP-binding protein OppD%2C 358 aa%3B fasta scores: opt: 1126 z-score: 1167.7 E(): 0%3B 53.9%25 identity in 310 aa overlap%2C to TR:P72409 (EMBL:U68036) Streptomyces coelicolor ABC transporter intracellular ATPase subunit BldKD%2C 353 aa%3B fasta scores: opt: 1035 z-score: 1074.2 E(): 0%3B 51.5%25 identity in 326 aa overlap and to TR:O86574 (EMBL:AL031184) Streptomyces coelicolor oligopeptide ABC transporter ATP-binding protein SC2A11.13%2C 365 aa%3B fasta scores: opt: 1097 z-score: 945.2 E(): 0%3B 52.3%25 identity in 331 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC9E12.05;product=peptide transport system ATP-binding protein;protein_id=NP_629269.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5567478	5568074	.	+	.	ID=id6590;Dbxref=GeneID:1100561;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 210.40%2C E-value 2.7e-59;gbkey=misc_feature;gene=SC9E12.05
NC_003888.3	RefSeq	sequence_feature	5567499	5567522	.	+	.	ID=id6591;Dbxref=GeneID:1100561;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9E12.05
NC_003888.3	RefSeq	sequence_feature	5567844	5567888	.	+	.	ID=id6592;Dbxref=GeneID:1100561;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC9E12.05
NC_003888.3	RefSeq	ribosome_entry_site	5568350	5568353	.	+	.	ID=id6593;Dbxref=GeneID:1100561;gbkey=RBS;gene=SC9E12.05
NC_003888.3	RefSeq	gene	5568361	5569431	.	+	.	ID=gene5173;Dbxref=GeneID:1100562;Name=SC9E12.06;gbkey=Gene;gene=SC9E12.06;gene_biotype=protein_coding;gene_synonym=SC9E12.06;locus_tag=SCO5121
NC_003888.3	RefSeq	CDS	5568361	5569431	.	+	0	ID=cds5073;Parent=gene5173;Dbxref=Genbank:NP_629270.1,GeneID:1100562;Name=NP_629270.1;Note=SC9E12.06%2C probable peptide transport system ATP-binding protein%2C len: 356 aa%3B similar to SW:APPF_BACSU (EMBL:U20909) Bacillus subtilis oligopeptide transport ATP-binding protein AppF%2C 329 aa%3B fasta scores: opt: 1255 z-score: 1332.6 E(): 0%3B 57.3%25 identity in 335 aa overlap%2C to TR:P72410 (EMBL:U68036) Streptomyces coelicolor ABC transporter intracellular ATPase subunit BldKE (fragment)%2C 284 aa%3B fasta scores: opt: 999 z-score: 1063.6 E(): 0%3B 58.1%25 identity in 260 aa overlap and to TR:O86575 (EMBL:AL031184) Streptomyces coelicolor oligopeptide ABC transporter ATP-binding protein SC2A11.14%2C 496 aa%3B fasta scores: opt: 1306 z-score: 1117.3 E(): 0%3B 55.4%25 identity in 345 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC9E12.06;product=peptide transport system ATP-binding protein;protein_id=NP_629270.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5568496	5569071	.	+	.	ID=id6594;Dbxref=GeneID:1100562;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 223.20%2C E-value 3.9e-63;gbkey=misc_feature;gene=SC9E12.06
NC_003888.3	RefSeq	sequence_feature	5568517	5568540	.	+	.	ID=id6595;Dbxref=GeneID:1100562;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9E12.06
NC_003888.3	RefSeq	sequence_feature	5568841	5568885	.	+	.	ID=id6596;Dbxref=GeneID:1100562;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC9E12.06
NC_003888.3	RefSeq	gene	5569564	5571687	.	-	.	ID=gene5174;Dbxref=GeneID:1100563;Name=SC9E12.07c;gbkey=Gene;gene=SC9E12.07c;gene_biotype=protein_coding;gene_synonym=SC9E12.07c;locus_tag=SCO5122
NC_003888.3	RefSeq	CDS	5569564	5571687	.	-	0	ID=cds5074;Parent=gene5174;Dbxref=Genbank:NP_629271.1,GeneID:1100563;Name=NP_629271.1;Note=SC9E12.07c%2C probable peptidase%2C len: 707 aa%3B similar to TR:P95782 (EMBL:D83263) Xanthomonas maltophilia dipeptidyl peptidase IV%2C 741 aa%3B fasta scores: opt: 442 z-score: 478.1 E(): 3.7e-19%3B 33.2%25 identity in 733 aa overlap. Contains Pfam matches to entries PF00930 DPPIV_N_term%2C Dipeptidyl peptidase IV (DPP IV) N-terminal region and PF00326 Peptidase_S9%2C Prolyl oligopeptidase family and match to Prosite entry PS00708 Prolyl endopeptidase family serine active site;gbkey=CDS;gene=SC9E12.07c;product=peptidase;protein_id=NP_629271.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5569969	5570166	.	-	.	ID=id6597;Dbxref=GeneID:1100563;Note=Pfam match to entry PF00326 Peptidase_S9%2C Prolyl oligopeptidase family%2C score 29.60%2C E-value 7.3e-08;gbkey=misc_feature;gene=SC9E12.07c
NC_003888.3	RefSeq	sequence_feature	5569969	5570061	.	-	.	ID=id6598;Dbxref=GeneID:1100563;Note=PS00708 Prolyl endopeptidase family serine active site;gbkey=misc_feature;gene=SC9E12.07c
NC_003888.3	RefSeq	sequence_feature	5570203	5571636	.	-	.	ID=id6599;Dbxref=GeneID:1100563;Note=Pfam match to entry PF00930 DPPIV_N_term%2C Dipeptidyl peptidase IV (DPP IV) N-terminal region%2C score -82.80%2C E-value 5.4e-07;gbkey=misc_feature;gene=SC9E12.07c
NC_003888.3	RefSeq	ribosome_entry_site	5571860	5571867	.	+	.	ID=id6600;gbkey=RBS
NC_003888.3	RefSeq	gene	5571874	5572068	.	+	.	ID=gene5175;Dbxref=GeneID:1100564;Name=SC9E12.08;gbkey=Gene;gene=SC9E12.08;gene_biotype=protein_coding;gene_synonym=SC9E12.08;locus_tag=SCO5123
NC_003888.3	RefSeq	CDS	5571874	5572068	.	+	0	ID=cds5075;Parent=gene5175;Dbxref=Genbank:NP_629272.1,GeneID:1100564;Name=NP_629272.1;Note=SC9E12.08%2C possible small membrane protein%2C len: 64 aa%3B similar to TR:Q9RKX4 (EMBL:AL133213) Streptomyces coelicolor  hypothetical protein SC6D7.24c%2C 64 aa%3B fasta scores: opt: 225 z-score: 329.1 E(): 7.3e-11%3B 56.5%25 identity in 62 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9E12.08;product=small membrane protein;protein_id=NP_629272.1;transl_table=11
NC_003888.3	RefSeq	gene	5572058	5572264	.	-	.	ID=gene5176;Dbxref=GeneID:1100565;Name=SC9E12.09c;gbkey=Gene;gene=SC9E12.09c;gene_biotype=protein_coding;gene_synonym=SC9E12.09c;locus_tag=SCO5124
NC_003888.3	RefSeq	CDS	5572058	5572264	.	-	0	ID=cds5076;Parent=gene5176;Dbxref=Genbank:NP_629273.1,GeneID:1100565;Name=NP_629273.1;Note=SC9E12.09c%2C hypothetical protein%2C len: 68 aa%3B similar to TR:Q9RDR5 (EMBL:AL136500) Streptomyces coelicolor hypothetical 7.7 kDa protein SC1G2.14c%2C 73 aa%3B fasta scores: opt: 217 z-score: 327.7 E(): 8.7e-11%3B 55.9%25 identity in 59 aa overlap;gbkey=CDS;gene=SC9E12.09c;product=hypothetical protein;protein_id=NP_629273.1;transl_table=11
NC_003888.3	RefSeq	gene	5572261	5573124	.	-	.	ID=gene5177;Dbxref=GeneID:1100566;Name=SC9E12.10c;gbkey=Gene;gene=SC9E12.10c;gene_biotype=protein_coding;gene_synonym=SC9E12.10c;locus_tag=SCO5125
NC_003888.3	RefSeq	CDS	5572261	5573124	.	-	0	ID=cds5077;Parent=gene5177;Dbxref=Genbank:NP_629274.1,GeneID:1100566;Name=NP_629274.1;Note=SC9E12.10c%2C hypothetical protein%2C len: 287 aa%3B similar to TR:Q9RDR4 (EMBL:AL136500) Streptomyces coelicolor hypothetical 31.7 kDa protein SC1G2.15c%2C 284 aa%3B fasta scores: opt: 1240 z-score: 1466.1 E(): 0%3B 67.2%25 identity in 287 aa overlap;gbkey=CDS;gene=SC9E12.10c;product=hypothetical protein;protein_id=NP_629274.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5572267	5572270	.	-	.	ID=id6601;Dbxref=GeneID:1100566;gbkey=RBS;gene=SC9E12.10c
NC_003888.3	RefSeq	ribosome_entry_site	5573133	5573139	.	-	.	ID=id6602;gbkey=RBS
NC_003888.3	RefSeq	gene	5573276	5574163	.	+	.	ID=gene5178;Dbxref=GeneID:1100567;Name=SC9E12.11;gbkey=Gene;gene=SC9E12.11;gene_biotype=protein_coding;gene_synonym=SC9E12.11;locus_tag=SCO5126
NC_003888.3	RefSeq	CDS	5573276	5574163	.	+	0	ID=cds5078;Parent=gene5178;Dbxref=Genbank:NP_629275.1,GeneID:1100567;Name=NP_629275.1;Note=SC9E12.11%2C hypothetical protein%2C len: 295 aa%3B similar to TR:O50426 (EMBL:AL010186) Mycobacterium tuberculosis hypothetical 31.7 kDa protein MTV005.06%2C 303 aa%3B fasta scores: opt: 531 z-score: 607.8 E(): 2.2e-26%3B 44.4%25 identity in 306 aa overlap;gbkey=CDS;gene=SC9E12.11;product=hypothetical protein;protein_id=NP_629275.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5574148	5574152	.	+	.	ID=id6603;Dbxref=GeneID:1100567;gbkey=RBS;gene=SC9E12.11
NC_003888.3	RefSeq	gene	5574160	5574582	.	+	.	ID=gene5179;Dbxref=GeneID:1100568;Name=SC9E12.12;gbkey=Gene;gene=SC9E12.12;gene_biotype=protein_coding;gene_synonym=SC9E12.12;locus_tag=SCO5127
NC_003888.3	RefSeq	CDS	5574160	5574582	.	+	0	ID=cds5079;Parent=gene5179;Dbxref=Genbank:NP_629276.1,GeneID:1100568;Name=NP_629276.1;Note=SC9E12.12%2C possible integral membrane protein%2C len: 1450 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9E12.12;product=hypothetical protein;protein_id=NP_629276.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5574726	5574729	.	+	.	ID=id6604;gbkey=RBS
NC_003888.3	RefSeq	gene	5574738	5577065	.	+	.	ID=gene5180;Dbxref=GeneID:1100569;Name=SC9E12.13;gbkey=Gene;gene=SC9E12.13;gene_biotype=protein_coding;gene_synonym=SC9E12.13;locus_tag=SCO5128
NC_003888.3	RefSeq	CDS	5574738	5577065	.	+	0	ID=cds5080;Parent=gene5180;Dbxref=Genbank:NP_629277.1,GeneID:1100569;Name=NP_629277.1;Note=SC9E12.13%2C possible membrane protein%2C len: 775 aa%3B highly hydrophilic. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9E12.13;product=hypothetical protein;protein_id=NP_629277.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5575164	5575892	.	+	.	ID=id6605;Dbxref=GeneID:1100569;Note=high content region in alanine%2C glycine and proline amino acid residues. High G+C content also (81.61%25);gbkey=misc_feature;gene=SC9E12.13
NC_003888.3	RefSeq	gene	5577212	5578168	.	+	.	ID=gene5181;Dbxref=GeneID:1100570;Name=SC9E12.14;gbkey=Gene;gene=SC9E12.14;gene_biotype=protein_coding;gene_synonym=SC9E12.14;locus_tag=SCO5129
NC_003888.3	RefSeq	CDS	5577212	5578168	.	+	0	ID=cds5081;Parent=gene5181;Dbxref=Genbank:NP_629278.1,GeneID:1100570;Name=NP_629278.1;Note=SC9E12.14%2C possible ABC transporter ATP-binding protein%2C len: 318 aa%3B similar to TR:CAB88183 (EMBL:AL352972) Streptomyces coelicolor ABC transporter ATP-binding protein SCC30.13%2C 308 aa%3B fasta scores: opt: 861 z-score: 926.3 E(): 0%3B 54.4%25 identity in 309 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC9E12.14;product=ABC transporter ATP-binding protein;protein_id=NP_629278.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5577305	5577829	.	+	.	ID=id6606;Dbxref=GeneID:1100570;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 180.30%2C E-value 3.2e-50;gbkey=misc_feature;gene=SC9E12.14
NC_003888.3	RefSeq	sequence_feature	5577326	5577349	.	+	.	ID=id6607;Dbxref=GeneID:1100570;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9E12.14
NC_003888.3	RefSeq	sequence_feature	5577602	5577646	.	+	.	ID=id6608;Dbxref=GeneID:1100570;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC9E12.14
NC_003888.3	RefSeq	ribosome_entry_site	5578149	5578154	.	+	.	ID=id6609;Dbxref=GeneID:1100570;gbkey=RBS;gene=SC9E12.14
NC_003888.3	RefSeq	gene	5578165	5578905	.	+	.	ID=gene5182;Dbxref=GeneID:1100571;Name=SC9E12.15;gbkey=Gene;gene=SC9E12.15;gene_biotype=protein_coding;gene_synonym=SC9E12.15;locus_tag=SCO5130
NC_003888.3	RefSeq	CDS	5578165	5578905	.	+	0	ID=cds5082;Parent=gene5182;Dbxref=Genbank:NP_629279.1,GeneID:1100571;Name=NP_629279.1;Note=SC9E12.15%2C possible ABC transporter integral membrane protein%2C len: 246 aa%3B similar to TR:CAB88184 (EMBL:AL352972) Streptomyces coelicolor ABC transporter integral membrane protein SCC30.14%2C 238 aa%3B fasta scores: opt: 516 z-score: 611.2 E(): 1.4e-26%3B 35.9%25 identity in 237 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9E12.15;product=ABC transporter;protein_id=NP_629279.1;transl_table=11
NC_003888.3	RefSeq	gene	5578902	5580068	.	+	.	ID=gene5183;Dbxref=GeneID:1100572;Name=SC9E12.16;gbkey=Gene;gene=SC9E12.16;gene_biotype=protein_coding;gene_synonym=SC9E12.16;locus_tag=SCO5131
NC_003888.3	RefSeq	CDS	5578902	5580068	.	+	0	ID=cds5083;Parent=gene5183;Dbxref=Genbank:NP_629280.1,GeneID:1100572;Name=NP_629280.1;Note=SC9E12.16%2C possible two-component system sensor kinase%2C len: 388 aa%3B similar to TR:CAB88185 (EMBL:AL352972) Streptomyces coelicolor two-component system sensor kinase SCC30.15%2C 409 aa%3B fasta scores: opt: 773 z-score: 840.8 E(): 0%3B 41.9%25 identity in 389 aa overlap. Contains possible hydrophobic membrane spanning regions at N-terminal domain;gbkey=CDS;gene=SC9E12.16;product=two-component system sensor kinase;protein_id=NP_629280.1;transl_table=11
NC_003888.3	RefSeq	gene	5580065	5580679	.	+	.	ID=gene5184;Dbxref=GeneID:1100573;Name=SC9E12.17;gbkey=Gene;gene=SC9E12.17;gene_biotype=protein_coding;gene_synonym=SC9E12.17;locus_tag=SCO5132
NC_003888.3	RefSeq	CDS	5580065	5580679	.	+	0	ID=cds5084;Parent=gene5184;Dbxref=Genbank:NP_629281.1,GeneID:1100573;Name=NP_629281.1;Note=SC9E12.17%2C possible two-component system response regulator%2C len: 204 aa%3B similar to TR:CAB88186 (EMBL:AL352972) Streptomyces coelicolor two-component response regulator SCC30.16%2C 210 aa%3B fasta scores: opt: 822 z-score: 928.1 E(): 0%3B 63.0%25 identity in 200 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family. Also contains possible helix-turn-helix motif at residues 159..180 (+5.28 SD);gbkey=CDS;gene=SC9E12.17;product=two-component system response regulator;protein_id=NP_629281.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5580077	5580418	.	+	.	ID=id6610;Dbxref=GeneID:1100573;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 100.50%2C E-value 3.2e-26;gbkey=misc_feature;gene=SC9E12.17
NC_003888.3	RefSeq	sequence_feature	5580485	5580676	.	+	.	ID=id6611;Dbxref=GeneID:1100573;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 65.30%2C E-value 1.3e-15;gbkey=misc_feature;gene=SC9E12.17
NC_003888.3	RefSeq	gene	5580789	5581685	.	-	.	ID=gene5185;Dbxref=GeneID:1100574;Name=SC9E12.18c;gbkey=Gene;gene=SC9E12.18c;gene_biotype=protein_coding;gene_synonym=SC9E12.18c;locus_tag=SCO5133
NC_003888.3	RefSeq	CDS	5580789	5581685	.	-	0	ID=cds5085;Parent=gene5185;Dbxref=Genbank:NP_629282.1,GeneID:1100574;Name=NP_629282.1;Note=SC9E12.18c%2C hypothetical protein%2C len: 298 aa%3B C-terminal highly similar to N-terminal domain of TR:Q07641 (EMBL:AB006206) Streptomyces griseus hypothetical 34.5 kDa protein in AmfR 3'region (fragment)%2C 87 aa%3B fasta scores: opt: 371 z-score: 414.3 E(): 1.3e-15%3B 63.2%25 identity in 87 aa overlap;gbkey=CDS;gene=SC9E12.18c;product=hypothetical protein;protein_id=NP_629282.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5581656	5581682	.	-	.	ID=id6612;Dbxref=GeneID:1100574;gbkey=repeat_region;gene=SC9E12.18c
NC_003888.3	RefSeq	gene	5581727	5582761	.	-	.	ID=gene5186;Dbxref=GeneID:1100575;Name=SC9E12.19c;gbkey=Gene;gene=SC9E12.19c;gene_biotype=protein_coding;gene_synonym=SC9E12.19c;locus_tag=SCO5134
NC_003888.3	RefSeq	CDS	5581727	5582761	.	-	0	ID=cds5086;Parent=gene5186;Dbxref=Genbank:NP_629283.1,GeneID:1100575;Name=NP_629283.1;Note=SC9E12.19c%2C hypothetical protein%2C len: 344 aa%3B highly similar to TR:O87087 (EMBL:AB006206) Streptomyces griseus AmfR%2C AmfA and AmfB genes and 4 ORFS%2C complete CDS%2C ORF5%2C 264 aa%3B fasta scores: opt: 1018 z-score: 1086.7 E(): 0%3B 63.3%25 identity in 264 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC9E12.19c;product=hypothetical protein;protein_id=NP_629283.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5581784	5582008	.	-	.	ID=id6613;Dbxref=GeneID:1100575;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 55.30%2C E-value 1.4e-12;gbkey=misc_feature;gene=SC9E12.19c
NC_003888.3	RefSeq	ribosome_entry_site	5582887	5582892	.	+	.	ID=id6614;gbkey=RBS
NC_003888.3	RefSeq	gene	5582902	5583222	.	+	.	ID=gene5187;Dbxref=GeneID:1100576;Name=fdxA1;gbkey=Gene;gene=fdxA1;gene_biotype=protein_coding;gene_synonym=fdxA1,SC9E12.20;locus_tag=SCO5135
NC_003888.3	RefSeq	CDS	5582902	5583222	.	+	0	ID=cds5087;Parent=gene5187;Dbxref=Genbank:NP_629284.1,GeneID:1100576;Name=NP_629284.1;Note=SC9E12.20%2C fdxA1%2C ferredoxin%2C len: 106 aa%3B similar to SW:FER_SACER (EMBL:M61119) Saccharopolyspora erythraea ferredoxin FdxA%2C 105 aa%3B fasta scores: opt: 618 z-score: 759.8 E(): 0%3B 78.1%25 identity in 105 aa overlap and to TR:CAC04216 (EMBL:AL391515) Streptomyces coelicolor FdxA%2C ferredoxin%2C 129 aa%3B fasta scores: opt: 520 z-score: 702.1 E(): 1.8e-33%3B 65.7%25 identity in 105 aa overlap. Contains Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain and match to Prosite entry PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=fdxA1;product=ferredoxin;protein_id=NP_629284.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5582998	5583069	.	+	.	ID=id6615;Dbxref=GeneID:1100576;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 37.10%2C E-value 3.9e-07;gbkey=misc_feature;gene=fdxA1
NC_003888.3	RefSeq	sequence_feature	5583019	5583054	.	+	.	ID=id6616;Dbxref=GeneID:1100576;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=fdxA1
NC_003888.3	RefSeq	stem_loop	5583242	5583297	.	+	.	ID=id6617;Note=possible stem loop. Score 50: 18/19 (94%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	5583326	5583329	.	+	.	ID=id6618;gbkey=RBS
NC_003888.3	RefSeq	gene	5583339	5584436	.	+	.	ID=gene5188;Dbxref=GeneID:1100577;Name=SC9E12.21;gbkey=Gene;gene=SC9E12.21;gene_biotype=protein_coding;gene_synonym=SC9E12.21;locus_tag=SCO5136
NC_003888.3	RefSeq	CDS	5583339	5584436	.	+	0	ID=cds5088;Parent=gene5188;Dbxref=Genbank:NP_629285.1,GeneID:1100577;Name=NP_629285.1;Note=catalyzes the formation of N-succinyl-LL-2%2C6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis;gbkey=CDS;gene=SC9E12.21;product=N-succinyldiaminopimelate aminotransferase;protein_id=NP_629285.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5583999	5584040	.	+	.	ID=id6619;Dbxref=GeneID:1100577;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SC9E12.21
NC_003888.3	RefSeq	gene	5584655	5585086	.	-	.	ID=gene5189;Dbxref=GeneID:1100578;Name=SC9E12.22c;gbkey=Gene;gene=SC9E12.22c;gene_biotype=protein_coding;gene_synonym=SC9E12.22c;locus_tag=SCO5137
NC_003888.3	RefSeq	CDS	5584655	5585086	.	-	0	ID=cds5089;Parent=gene5189;Dbxref=Genbank:NP_629286.1,GeneID:1100578;Name=NP_629286.1;Note=SC9E12.22c%2C possible ATP-binding protein%2C len: 143 aa. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9E12.22c;product=ATP-binding protein;protein_id=NP_629286.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5584829	5584852	.	-	.	ID=id6620;Dbxref=GeneID:1100578;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9E12.22c
NC_003888.3	RefSeq	ribosome_entry_site	5585091	5585096	.	-	.	ID=id6621;gbkey=RBS
NC_003888.3	RefSeq	gene	5585424	5586392	.	-	.	ID=gene5190;Dbxref=GeneID:1100579;Name=SC9E12.23c;gbkey=Gene;gene=SC9E12.23c;gene_biotype=protein_coding;gene_synonym=SC9E12.23c,SCP8.01c;locus_tag=SCO5138
NC_003888.3	RefSeq	CDS	5585424	5586392	.	-	0	ID=cds5090;Parent=gene5190;Dbxref=Genbank:NP_733656.1,GeneID:1100579;Name=NP_733656.1;Note=SCP8.01c%2C possible membrane protein (fragment)%2C len: >86 aa. . Contains possible hydrophobic membrane spanning region~SC9E12.23c%2C hypothetical protein (fragment)%2C len: >270 aa%3B similar to TR:Q9X867 (EMBL:AL049661) Streptomyces coelicolor lipoprotein SCE134.12%2C 381 aa%3B fasta scores: opt: 432 z-score: 481.0 E(): 2.5e-19%3B 41.2%25 identity in 211 aa overlap;gbkey=CDS;gene=SC9E12.23c;product=hypothetical protein;protein_id=NP_733656.1;transl_table=11
NC_003888.3	RefSeq	gene	5586476	5587555	.	+	.	ID=gene5191;Dbxref=GeneID:1100580;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;gene_synonym=dapE,SCP8.02;locus_tag=SCO5139
NC_003888.3	RefSeq	CDS	5586476	5587555	.	+	0	ID=cds5091;Parent=gene5191;Dbxref=Genbank:NP_629287.1,GeneID:1100580;Name=NP_629287.1;Note=catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate;gbkey=CDS;gene=dapE;product=succinyl-diaminopimelate desuccinylase;protein_id=NP_629287.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5586521	5587282	.	+	.	ID=id6622;Dbxref=GeneID:1100580;Note=Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40%2C score 165.00%2C E-value 2.1e-46;gbkey=misc_feature;gene=dapE
NC_003888.3	RefSeq	gene	5587673	5588431	.	+	.	ID=gene5192;Dbxref=GeneID:1100581;Name=SCP8.03;gbkey=Gene;gene=SCP8.03;gene_biotype=protein_coding;gene_synonym=SCP8.03;locus_tag=SCO5140
NC_003888.3	RefSeq	CDS	5587673	5588431	.	+	0	ID=cds5092;Parent=gene5192;Dbxref=Genbank:NP_629288.1,GeneID:1100581;Name=NP_629288.1;Note=SCP8.03%2C hypothetical protein%2C len: 252 aa%3B similar to TR:Q46063 (EMBL:X81379) Corynebacterium glutamicum ORF2%2C 211 aa%3B fasta scores: opt: 938 z-score: 1070.3 E(): 0%3B 67.1%25 identity in 210 aa overlap;gbkey=CDS;gene=SCP8.03;product=hypothetical protein;protein_id=NP_629288.1;transl_table=11
NC_003888.3	RefSeq	gene	5588682	5589566	.	-	.	ID=gene5193;Dbxref=GeneID:1100582;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;gene_synonym=folP,SCP8.04c;locus_tag=SCO5141
NC_003888.3	RefSeq	CDS	5588682	5589566	.	-	0	ID=cds5093;Parent=gene5193;Dbxref=Genbank:NP_629289.1,GeneID:1100582;Name=NP_629289.1;Note=SCP8.04c%2C folP%2C dihydropteroate synthase%2C len: 294 aa%3B similar to SW:DHPS_MYCLE (EMBL:U15180) Mycobacterium leprae dihydropteroate synthase (EC 2.5.1.15) (DHPS) FolP%2C 291 aa%3B fasta scores: opt: 1095 z-score: 1239.8 E(): 0%3B 60.6%25 identity in 292 aa overlap. Contains Pfam match to entry PF00809 DHPS%2C Dihydropteroate synthase and matches to Prosite entries PS00792 Dihydropteroate synthase signature 1 and PS00793 Dihydropteroate synthase signature 2;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=NP_629289.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5588730	5589494	.	-	.	ID=id6623;Dbxref=GeneID:1100582;Note=Pfam match to entry PF00809 DHPS%2C Dihydropteroate synthase%2C score 330.90%2C E-value 1.4e-95;gbkey=misc_feature;gene=folP
NC_003888.3	RefSeq	sequence_feature	5589354	5589395	.	-	.	ID=id6624;Dbxref=GeneID:1100582;Note=PS00793 Dihydropteroate synthase signature 2;gbkey=misc_feature;gene=folP
NC_003888.3	RefSeq	sequence_feature	5589450	5589497	.	-	.	ID=id6625;Dbxref=GeneID:1100582;Note=PS00792 Dihydropteroate synthase signature 1;gbkey=misc_feature;gene=folP
NC_003888.3	RefSeq	gene	5589711	5590070	.	+	.	ID=gene5194;Dbxref=GeneID:1100583;Name=SCP8.05;gbkey=Gene;gene=SCP8.05;gene_biotype=protein_coding;gene_synonym=SCP8.05;locus_tag=SCO5142
NC_003888.3	RefSeq	CDS	5589711	5590070	.	+	0	ID=cds5094;Parent=gene5194;Dbxref=Genbank:NP_629290.1,GeneID:1100583;Name=NP_629290.1;Note=SCP8.05%2C possible hypothetical protein%2C len: 119 aa. Contains possible coiled-coil region at approx residues 77..95 and N-terminal region signal peptide sequence;gbkey=CDS;gene=SCP8.05;product=hypothetical protein;protein_id=NP_629290.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5590057	5590061	.	+	.	ID=id6626;Dbxref=GeneID:1100583;gbkey=RBS;gene=SCP8.05
NC_003888.3	RefSeq	gene	5590067	5590651	.	+	.	ID=gene5195;Dbxref=GeneID:1100584;Name=SCP8.06;gbkey=Gene;gene=SCP8.06;gene_biotype=protein_coding;gene_synonym=SCP8.06,tag;locus_tag=SCO5143
NC_003888.3	RefSeq	CDS	5590067	5590651	.	+	0	ID=cds5095;Parent=gene5195;Dbxref=Genbank:NP_629291.1,GeneID:1100584;Name=NP_629291.1;Note=SCP8.06%2C tag%2C DNA-3-methyladenine glycosylase I%2C len: 194 aa%3B highly similar to SW:3MG1_ECOLI (EMBL:J02606) Escherichia coli DNA-3-methyladenine glycosylase I (EC 3.2.2.20) Tag%2C 187 aa%3B fasta scores: opt: 529 z-score: 636.5 E(): 5.5e-28%3B 45.2%25 identity in 177 aa overlap;gbkey=CDS;gene=SCP8.06;product=DNA-3-methyladenine glycosylase I;protein_id=NP_629291.1;transl_table=11
NC_003888.3	RefSeq	gene	5591303	5592106	.	-	.	ID=gene5196;Dbxref=GeneID:1100585;Name=SCP8.07c;gbkey=Gene;gene=SCP8.07c;gene_biotype=protein_coding;gene_synonym=SCP8.07c;locus_tag=SCO5144
NC_003888.3	RefSeq	CDS	5591303	5592106	.	-	0	ID=cds5096;Parent=gene5196;Dbxref=Genbank:NP_629292.1,GeneID:1100585;Name=NP_629292.1;Note=SCP8.07c%2C probable acyl CoA isomerase%2C len: 267 aa%3B highly similar to TR:AAF73478 (EMBL:AF268489) Streptomyces collinus 2-cyclohexenylcarbonyl CoA isomerase ChcB%2C 269 aa%3B fasta scores: opt: 1476 z-score: 1623.5 E(): 0%3B 87.6%25 identity in 266 aa overlap and to SW:CRT_CLOAB (EMBL:U17110) Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) Crt%2C 261 aa%3B fasta scores: opt: 426 z-score: 476.6 E(): 4.4e-19%3B 32.4%25 identity in 259 aa overlap. Contains Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family and match to Prosite entry PS00166 Enoyl-CoA hydratase/isomerase signature;gbkey=CDS;gene=SCP8.07c;product=acyl CoA isomerase;protein_id=NP_629292.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5591534	5592067	.	-	.	ID=id6627;Dbxref=GeneID:1100585;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 171.20%2C E-value 1.8e-47;gbkey=misc_feature;gene=SCP8.07c
NC_003888.3	RefSeq	sequence_feature	5591723	5591785	.	-	.	ID=id6628;Dbxref=GeneID:1100585;Note=PS00166 Enoyl-CoA hydratase/isomerase signature;gbkey=misc_feature;gene=SCP8.07c
NC_003888.3	RefSeq	ribosome_entry_site	5592115	5592119	.	-	.	ID=id6629;gbkey=RBS
NC_003888.3	RefSeq	gene	5592410	5592634	.	+	.	ID=gene5197;Dbxref=GeneID:1100586;Name=SCP8.08;gbkey=Gene;gene=SCP8.08;gene_biotype=protein_coding;gene_synonym=SCP8.08;locus_tag=SCO5145
NC_003888.3	RefSeq	CDS	5592410	5592634	.	+	0	ID=cds5097;Parent=gene5197;Dbxref=Genbank:NP_629293.1,GeneID:1100586;Name=NP_629293.1;Note=SCP8.08%2C conserved hypothetical protein%2C len: 74 aa%3B highly similar to TR:O05312 (EMBL:Z93777) Mycobacterium tuberculosis hypothetical 7.8 kD protein MTCI364.23%2C 75 aa%3B fasta scores: opt: 323 z-score: 419.6 E(): 6.6e-16%3B 78.6%25 identity in 70 aa overlap;gbkey=CDS;gene=SCP8.08;product=hypothetical protein;protein_id=NP_629293.1;transl_table=11
NC_003888.3	RefSeq	gene	5592745	5593269	.	-	.	ID=gene5198;Dbxref=GeneID:1100587;Name=SCP8.09c;gbkey=Gene;gene=SCP8.09c;gene_biotype=protein_coding;gene_synonym=SCP8.09c;locus_tag=SCO5146
NC_003888.3	RefSeq	CDS	5592745	5593269	.	-	0	ID=cds5098;Parent=gene5198;Dbxref=Genbank:NP_629294.1,GeneID:1100587;Name=NP_629294.1;Note=SCP8.09c%2C probable methyltransferase%2C len: 174 aa%3B similar to SW:MDMC_STRMY (EMBL:M93958) Streptomyces mycarofaciens O-methyltransferase (EC 2.1.1.-) MdmC%2C 221 aa%3B fasta scores: opt: 253 z-score: 313.8 E(): 5.2e-10%3B 31.5%25 identity in 178 aa overlap. Contains Pfam match to entry PF01596 Methyltransf_3%2C O-methyltransferase;gbkey=CDS;gene=SCP8.09c;product=methyltransferase;protein_id=NP_629294.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5592748	5593269	.	-	.	ID=id6630;Dbxref=GeneID:1100587;Note=Pfam match to entry PF01596 Methyltransf_3%2C O-methyltransferase%2C score -18.50%2C E-value 5.8e-08;gbkey=misc_feature;gene=SCP8.09c
NC_003888.3	RefSeq	sequence_feature	5593455	5593460	.	+	.	ID=id6631;Note=DraI restriction site;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5593690	5594361	.	+	.	ID=gene5199;Dbxref=GeneID:1100588;Name=SCP8.10;gbkey=Gene;gene=SCP8.10;gene_biotype=protein_coding;gene_synonym=SCP8.10;locus_tag=SCO5147
NC_003888.3	RefSeq	CDS	5593690	5594361	.	+	0	ID=cds5099;Parent=gene5199;Dbxref=Genbank:NP_629295.1,GeneID:1100588;Name=NP_629295.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B in M. tuberculosis this protein is involved in heat shock%2C oxidative stress and virulence;gbkey=CDS;gene=SCP8.10;product=RNA polymerase sigma factor SigE;protein_id=NP_629295.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5593840	5594004	.	+	.	ID=id6632;Dbxref=GeneID:1100588;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 95.00%2C E-value 1.5e-24;gbkey=misc_feature;gene=SCP8.10
NC_003888.3	RefSeq	gene	5594358	5595347	.	+	.	ID=gene5200;Dbxref=GeneID:1100589;Name=SCP8.11;gbkey=Gene;gene=SCP8.11;gene_biotype=protein_coding;gene_synonym=SCP8.11;locus_tag=SCO5148
NC_003888.3	RefSeq	CDS	5594358	5595347	.	+	0	ID=cds5100;Parent=gene5200;Dbxref=Genbank:NP_629296.1,GeneID:1100589;Name=NP_629296.1;Note=SCP8.11%2C possible membrane protein%2C len: 329 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCP8.11;product=hypothetical protein;protein_id=NP_629296.1;transl_table=11
NC_003888.3	RefSeq	gene	5595838	5597466	.	+	.	ID=gene5201;Dbxref=GeneID:1100590;Name=SCP8.12;gbkey=Gene;gene=SCP8.12;gene_biotype=protein_coding;gene_synonym=SCP8.12;locus_tag=SCO5149
NC_003888.3	RefSeq	CDS	5595838	5597466	.	+	0	ID=cds5101;Parent=gene5201;Dbxref=Genbank:NP_629297.1,GeneID:1100590;Name=NP_629297.1;Note=SCP8.12%2C possible protease%2C len: 542 aa%3B C-terminal region similar to TR:O53896 (EMBL:AL021999) Mycobacterium tuberculosis serine protease MTV044.11%2C 464 aa%3B fasta scores: opt: 803 z-score: 614.5 E(): 9.2e-27%3B 39.4%25 identity in 469 aa overlap and to TR:AAF61294 (EMBL:AF155705) Lactococcus lactis serine protease HtrA%2C 408 aa%3B fasta scores: opt: 536 z-score: 415.8 E(): 1.1e-15%3B 34.8%25 identity in 310 aa overlap. Contains Pfam matches to entries PF00089 trypsin%2C Trypsin and PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF);gbkey=CDS;gene=SCP8.12;product=protease;protein_id=NP_629297.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5596513	5597067	.	+	.	ID=id6633;Dbxref=GeneID:1100590;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 32.00%2C E-value 2.6e-09;gbkey=misc_feature;gene=SCP8.12
NC_003888.3	RefSeq	sequence_feature	5597149	5597415	.	+	.	ID=id6634;Dbxref=GeneID:1100590;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF).%2C score 21.60%2C E-value 0.0081;gbkey=misc_feature;gene=SCP8.12
NC_003888.3	RefSeq	gene	5597613	5598098	.	+	.	ID=gene5202;Dbxref=GeneID:1100591;Name=SCP8.13;gbkey=Gene;gene=SCP8.13;gene_biotype=protein_coding;gene_synonym=SCP8.13;locus_tag=SCO5150
NC_003888.3	RefSeq	CDS	5597613	5598098	.	+	0	ID=cds5102;Parent=gene5202;Dbxref=Genbank:NP_629298.1,GeneID:1100591;Name=NP_629298.1;Note=mediates the export of protein precursors bearing twin-arginine signal peptides;gbkey=CDS;gene=SCP8.13;product=sec-independent translocase;protein_id=NP_629298.1;transl_table=11
NC_003888.3	RefSeq	gene	5598255	5599001	.	+	.	ID=gene5203;Dbxref=GeneID:1100592;Name=SCP8.14;gbkey=Gene;gene=SCP8.14;gene_biotype=protein_coding;gene_synonym=SCP8.14;locus_tag=SCO5151
NC_003888.3	RefSeq	CDS	5598255	5599001	.	+	0	ID=cds5103;Parent=gene5203;Dbxref=Genbank:NP_629299.1,GeneID:1100592;Name=NP_629299.1;Note=SCP8.14%2C unknown%2C len: 248 aa;gbkey=CDS;gene=SCP8.14;product=hypothetical protein;protein_id=NP_629299.1;transl_table=11
NC_003888.3	RefSeq	gene	5599076	5600209	.	-	.	ID=gene5204;Dbxref=GeneID:1100593;Name=SCP8.15c;gbkey=Gene;gene=SCP8.15c;gene_biotype=protein_coding;gene_synonym=SCP8.15c;locus_tag=SCO5152
NC_003888.3	RefSeq	CDS	5599076	5600209	.	-	0	ID=cds5104;Parent=gene5204;Dbxref=Genbank:NP_629300.1,GeneID:1100593;Name=NP_629300.1;Note=SCP8.15c%2C probable ATP-binding protein%2C len: 371 aa%3B similar to SW:MRP_MYCTU (EMBL:Z98260) Mycobacterium tuberculosis Mrp protein homolog MTV006.01c%2C 390 aa%3B fasta scores: opt: 1650 z-score: 1730.0 E(): 0%3B 67.9%25 identity in 371 aa overlap and to SW:MRP_ECOLI (EMBL:U00007) Escherichia coli Mrp protein%2C 379 aa%3B fasta scores: opt: 706 z-score: 744.5 E(): 0%3B 35.8%25 identity in 363 aa overlap. Contains Pfam matches to entries PF01883 DUF59%2C Domain of unknown function DUF59 and PF00142 fer4_NifH%2C 4Fe-4S iron sulfur cluster binding proteins%2C NifH/frxC family and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS01215 Mrp family signature;gbkey=CDS;gene=SCP8.15c;product=ATP-binding protein;protein_id=NP_629300.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5599517	5599567	.	-	.	ID=id6635;Dbxref=GeneID:1100593;Note=PS01215 Mrp family signature;gbkey=misc_feature;gene=SCP8.15c
NC_003888.3	RefSeq	sequence_feature	5599781	5599876	.	-	.	ID=id6636;Dbxref=GeneID:1100593;Note=Pfam match to entry PF00142 fer4_NifH%2C 4Fe-4S iron sulfur cluster binding proteins%2C NifH/frxC family%2C score 16.90%2C E-value 0.00075;gbkey=misc_feature;gene=SCP8.15c
NC_003888.3	RefSeq	sequence_feature	5599832	5599855	.	-	.	ID=id6637;Dbxref=GeneID:1100593;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCP8.15c
NC_003888.3	RefSeq	sequence_feature	5599949	5600191	.	-	.	ID=id6638;Dbxref=GeneID:1100593;Note=Pfam match to entry PF01883 DUF59%2C Domain of unknown function DUF59%2C score 31.60%2C E-value 7.8e-07;gbkey=misc_feature;gene=SCP8.15c
NC_003888.3	RefSeq	gene	5600254	5600850	.	-	.	ID=gene5205;Dbxref=GeneID:1100594;Name=SCP8.16c;gbkey=Gene;gene=SCP8.16c;gene_biotype=protein_coding;gene_synonym=SCP8.16c;locus_tag=SCO5153
NC_003888.3	RefSeq	CDS	5600254	5600850	.	-	0	ID=cds5105;Parent=gene5205;Dbxref=Genbank:NP_629301.1,GeneID:1100594;Name=NP_629301.1;Note=SCP8.16c%2C possible integral membrane protein%2C len: 198 aa%3B similar to TR:O86314 (EMBL:Z98260) Mycobacterium tuberculosis hypothetical 20.4 kD protein MTV006.03c%2C 180 aa%3B fasta scores: opt: 517 z-score: 619.2 E(): 5.1e-27%3B 52.9%25 identity in 157 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCP8.16c;product=hypothetical protein;protein_id=NP_629301.1;transl_table=11
NC_003888.3	RefSeq	gene	5600843	5602144	.	-	.	ID=gene5206;Dbxref=GeneID:1100595;Name=SCP8.17c;gbkey=Gene;gene=SCP8.17c;gene_biotype=protein_coding;gene_synonym=SCP8.17c;locus_tag=SCO5154
NC_003888.3	RefSeq	CDS	5600843	5602144	.	-	0	ID=cds5106;Parent=gene5206;Dbxref=Genbank:NP_629302.1,GeneID:1100595;Name=NP_629302.1;Note=SCP8.17c%2C hypothetical protein%2C len: 433 aa%3B highly similar to TR:O86315 (EMBL:Z98260) Mycobacterium tuberculosis hypothetical 47.4 kD protein MTV006.04c%2C 435 aa%3B fasta scores: opt: 1335 z-score: 1494.5 E(): 0%3B 49.9%25 identity in 425 aa overlap and C-terminal region similar to C-terminal region of TR:Q9X0P4 (EMBL:AE001773) Thermotoga maritima Mg2+ transporter MgtE%2C %2C 446 aa%3B fasta scores: opt: 390 z-score: 439.1 E(): 5.4e-17%3B 31.3%25 identity in 240 aa overlap;gbkey=CDS;gene=SCP8.17c;product=hypothetical protein;protein_id=NP_629302.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5602153	5602160	.	-	.	ID=id6639;gbkey=RBS
NC_003888.3	RefSeq	gene	5602439	5603170	.	+	.	ID=gene5207;Dbxref=GeneID:1100596;Name=SCP8.18;gbkey=Gene;gene=SCP8.18;gene_biotype=protein_coding;gene_synonym=SCP8.18;locus_tag=SCO5155
NC_003888.3	RefSeq	CDS	5602439	5603170	.	+	0	ID=cds5107;Parent=gene5207;Dbxref=Genbank:NP_629303.1,GeneID:1100596;Name=NP_629303.1;Note=SCP8.18%2C possible lipoprotein%2C len: 243 aa%3B similar to TR:CAB76294 (EMBL:AL158057) Streptomyces coelicolor lipoprotein SC1G8.21c%2C 249 aa%3B fasta scores: opt: 238 z-score: 275.6 E(): 7e-08%3B 29.3%25 identity in 249 aa overlap. Contains possible N-terminal region signal peptide sequence and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SCP8.18;product=lipoprotein;protein_id=NP_629303.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5602493	5602525	.	+	.	ID=id6640;Dbxref=GeneID:1100596;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCP8.18
NC_003888.3	RefSeq	gene	5603185	5603697	.	-	.	ID=gene5208;Dbxref=GeneID:1100597;Name=SCP8.19c;gbkey=Gene;gene=SCP8.19c;gene_biotype=protein_coding;gene_synonym=SCP8.19c;locus_tag=SCO5156
NC_003888.3	RefSeq	CDS	5603185	5603697	.	-	0	ID=cds5108;Parent=gene5208;Dbxref=Genbank:NP_629304.1,GeneID:1100597;Name=NP_629304.1;Note=SCP8.19c%2C unknown%2C len: 170 aa;gbkey=CDS;gene=SCP8.19c;product=hypothetical protein;protein_id=NP_629304.1;transl_table=11
NC_003888.3	RefSeq	gene	5603731	5604846	.	-	.	ID=gene5209;Dbxref=GeneID:1100598;Name=SCP8.20c;gbkey=Gene;gene=SCP8.20c;gene_biotype=protein_coding;gene_synonym=SCP8.20c;locus_tag=SCO5157
NC_003888.3	RefSeq	CDS	5603731	5604846	.	-	0	ID=cds5109;Parent=gene5209;Dbxref=Genbank:NP_629305.1,GeneID:1100598;Name=NP_629305.1;Note=SCP8.20c%2C probable metal-transport protein%2C len: 371 aa%3B similar to TR:O50455 (EMBL:AL021006) Mycobacterium tuberculosis  magnesium and cobalt transport protein MTV006.11c%2C 366 aa%3B fasta scores: opt: 1137 z-score: 1293.8 E(): 0%3B 47.8%25 identity in 370 aa overlap and to SW:CORA_ECOLI (EMBL:L11042) Escherichia coli magnesium and cobalt transport protein CorA%2C 316 aa%3B fasta scores: opt: 211 z-score: 245.7 E(): 3.2e-06%3B 23.2%25 identity in 306 aa overlap. Contains Pfam match to entry PF01544 CorA%2C CorA-like Mg2+ transporter and possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=SCP8.20c;product=metal-transport protein;protein_id=NP_629305.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5603734	5604654	.	-	.	ID=id6641;Dbxref=GeneID:1100598;Note=Pfam match to entry PF01544 CorA%2C CorA-like Mg2+ transporter%2C score 299.50%2C E-value 4.1e-86;gbkey=misc_feature;gene=SCP8.20c
NC_003888.3	RefSeq	ribosome_entry_site	5604853	5604858	.	-	.	ID=id6642;gbkey=RBS
NC_003888.3	RefSeq	gene	5605370	5605966	.	+	.	ID=gene5210;Dbxref=GeneID:1100599;Name=SCP8.21;gbkey=Gene;gene=SCP8.21;gene_biotype=protein_coding;gene_synonym=SCP8.21;locus_tag=SCO5158
NC_003888.3	RefSeq	CDS	5605370	5605966	.	+	0	ID=cds5110;Parent=gene5210;Dbxref=Genbank:NP_629306.1,GeneID:1100599;Name=NP_629306.1;Note=SCP8.21%2C unknown%2C len: 198 aa;gbkey=CDS;gene=SCP8.21;product=hypothetical protein;protein_id=NP_629306.1;transl_table=11
NC_003888.3	RefSeq	gene	5606015	5607238	.	-	.	ID=gene5211;Dbxref=GeneID:1100600;Name=SCP8.22c;gbkey=Gene;gene=SCP8.22c;gene_biotype=protein_coding;gene_synonym=SCP8.22c;locus_tag=SCO5159
NC_003888.3	RefSeq	CDS	5606015	5607238	.	-	0	ID=cds5111;Parent=gene5211;Dbxref=Genbank:NP_629307.1,GeneID:1100600;Name=NP_629307.1;Note=SCP8.22c%2C possible integral membrane transport protein%2C len: 407 aa%3B similar to TR:CAB76344 (EMBL:AL158061) Streptomyces coelicolor multidrug-efflux transporter SC6D11.21%2C 577 aa%3B fasta scores: opt: 1286 z-score: 1436.2 E(): 0%3B 51.1%25 identity in 393 aa overlap and to SW:BMR1_BACSU (EMBL:M33768) Bacillus subtilis multidrug resistance protein 1 Bmr1%2C 389 aa%3B fasta scores: opt: 262 z-score: 298.0 E(): 3.9e-09%3B 22.9%25 identity in 375 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCP8.22c;product=integral membrane transport protein;protein_id=NP_629307.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5606060	5607172	.	-	.	ID=id6643;Dbxref=GeneID:1100600;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -93.70%2C E-value 0.0016;gbkey=misc_feature;gene=SCP8.22c
NC_003888.3	RefSeq	ribosome_entry_site	5607246	5607249	.	-	.	ID=id6644;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	5607319	5607324	.	+	.	ID=id6645;Note=AseI restriction site~Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5607319	5607324	.	-	.	ID=id6646;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5607430	5608080	.	+	.	ID=gene5212;Dbxref=GeneID:1100601;Name=SCP8.23;gbkey=Gene;gene=SCP8.23;gene_biotype=protein_coding;gene_synonym=SCP8.23;locus_tag=SCO5160
NC_003888.3	RefSeq	CDS	5607430	5608080	.	+	0	ID=cds5112;Parent=gene5212;Dbxref=Genbank:NP_629308.1,GeneID:1100601;Name=NP_629308.1;Note=SCP8.23%2C unknown%2C len: 216 aa;gbkey=CDS;gene=SCP8.23;product=hypothetical protein;protein_id=NP_629308.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5608297	5608300	.	+	.	ID=id6647;gbkey=RBS
NC_003888.3	RefSeq	gene	5608309	5609166	.	+	.	ID=gene5213;Dbxref=GeneID:1100602;Name=SCP8.24;gbkey=Gene;gene=SCP8.24;gene_biotype=protein_coding;gene_synonym=SCP8.24;locus_tag=SCO5161
NC_003888.3	RefSeq	CDS	5608309	5609166	.	+	0	ID=cds5113;Parent=gene5213;Dbxref=Genbank:NP_629309.1,GeneID:1100602;Name=NP_629309.1;Note=SCP8.24%2C hypothetical protein%2C len: 285 aa%3B similar to SW:TRPH_ECOLI (EMBL:AE000224) Escherichia coli TrpH protein%2C 293 aa%3B fasta scores: opt: 376 z-score: 429.3 E(): 1.9e-16%3B 30.6%25 identity in 248 aa overlap. Contains Pfam match to entry PF02231 PHP_N%2C PHP domain N-terminal region;gbkey=CDS;gene=SCP8.24;product=hypothetical protein;protein_id=NP_629309.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5608315	5608503	.	+	.	ID=id6648;Dbxref=GeneID:1100602;Note=Pfam match to entry PF02231 PHP_N%2C PHP domain N-terminal region%2C score 74.90%2C E-value 1.7e-18;gbkey=misc_feature;gene=SCP8.24
NC_003888.3	RefSeq	gene	5609220	5609825	.	+	.	ID=gene5214;Dbxref=GeneID:1100603;Name=SCP8.25;gbkey=Gene;gene=SCP8.25;gene_biotype=protein_coding;gene_synonym=SCP8.25;locus_tag=SCO5162
NC_003888.3	RefSeq	CDS	5609220	5609825	.	+	0	ID=cds5114;Parent=gene5214;Dbxref=Genbank:NP_629310.1,GeneID:1100603;Name=NP_629310.1;Note=SCP8.25%2C possible integral membrane protein%2C len: 201 aa%3B similar to SW:YCHE_ECOLI (EMBL:AE000222) Escherichia coli hypothetical 23.5 kD protein in AdhE-OppA intergenic region YchE%2C 215 aa%3B fasta scores: opt: 406 z-score: 496.2 E(): 3.6e-20%3B 30.0%25 identity in 207 aa overlap. Contains Pfam match to entry PF01914 UPF0056%2C Uncharacterized protein family UPF0056 and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCP8.25;product=hypothetical protein;protein_id=NP_629310.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5609229	5609813	.	+	.	ID=id6649;Dbxref=GeneID:1100603;Note=Pfam match to entry PF01914 UPF0056%2C Uncharacterized protein family UPF0056%2C score 165.40%2C E-value 9.6e-46;gbkey=misc_feature;gene=SCP8.25
NC_003888.3	RefSeq	gene	5609892	5610044	.	-	.	ID=gene5215;Dbxref=GeneID:1100604;Name=SCP8.26c;gbkey=Gene;gene=SCP8.26c;gene_biotype=protein_coding;gene_synonym=SCP8.26c;locus_tag=SCO5163
NC_003888.3	RefSeq	CDS	5609892	5610044	.	-	0	ID=cds5115;Parent=gene5215;Dbxref=Genbank:NP_629311.1,GeneID:1100604;Name=NP_629311.1;Note=SCP8.26c%2C unknown%2C len: 50 aa. Highly hydrophilic;gbkey=CDS;gene=SCP8.26c;product=hypothetical protein;protein_id=NP_629311.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5610050	5610053	.	-	.	ID=id6650;gbkey=RBS
NC_003888.3	RefSeq	gene	5610280	5611185	.	+	.	ID=gene5216;Dbxref=GeneID:1100605;Name=SCP8.27;gbkey=Gene;gene=SCP8.27;gene_biotype=protein_coding;gene_synonym=SCP8.27;locus_tag=SCO5164
NC_003888.3	RefSeq	CDS	5610280	5611185	.	+	0	ID=cds5116;Parent=gene5216;Dbxref=Genbank:NP_629312.1,GeneID:1100605;Name=NP_629312.1;Note=SCP8.27%2C hypothetical protein%2C len: 300 aa%3B similar to N-terminal region of TR:Q9S2S7 (EMBL:AL096884) Streptomyces coelicolor hypothetical 44.0 kD protein SC4G6.31c%2C 403 aa%3B fasta scores: opt: 423 z-score: 494.8 E(): 4.3e-20%3B 36.5%25 identity in 230 aa overlap;gbkey=CDS;gene=SCP8.27;product=hypothetical protein;protein_id=NP_629312.1;transl_table=11
NC_003888.3	RefSeq	gene	5611293	5612189	.	-	.	ID=gene5217;Dbxref=GeneID:1100606;Name=SCP8.28c;gbkey=Gene;gene=SCP8.28c;gene_biotype=protein_coding;gene_synonym=SCP8.28c;locus_tag=SCO5165
NC_003888.3	RefSeq	CDS	5611293	5612189	.	-	0	ID=cds5117;Parent=gene5217;Dbxref=Genbank:NP_629313.1,GeneID:1100606;Name=NP_629313.1;Note=SCP8.28c%2C possible hydrolase%2C len: 298 aa%3B similar to TR:Q9RL59 (EMBL:AL121596) Streptomyces coelicolor hydrolase SCF51A.05%2C 278 aa%3B fasta scores: opt: 217 z-score: 249.2 E(): 2e-06%3B 27.0%25 identity in 267 aa overlap and to SW:THCF_RHOER (EMBL:U95170) Rhodococcus erythropolis non-heme haloperoxidase (EC 1.11.1.-) ThcF%2C 274 aa%3B fasta scores: opt: 185 z-score: 213.7 E(): 0.00019l%3B 29.0%25 identity in 241 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold and match to Prosite entry PS00120 Lipases%2C serine active site;gbkey=CDS;gene=SCP8.28c;product=hydrolase;protein_id=NP_629313.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5611332	5611991	.	-	.	ID=id6651;Dbxref=GeneID:1100606;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 36.00%2C E-value 8.4e-07;gbkey=misc_feature;gene=SCP8.28c
NC_003888.3	RefSeq	sequence_feature	5611833	5611862	.	-	.	ID=id6652;Dbxref=GeneID:1100606;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=SCP8.28c
NC_003888.3	RefSeq	gene	5612300	5614939	.	-	.	ID=gene5218;Dbxref=GeneID:1100607;Name=SCP8.29c;gbkey=Gene;gene=SCP8.29c;gene_biotype=protein_coding;gene_synonym=SCP8.29c;locus_tag=SCO5166
NC_003888.3	RefSeq	CDS	5612300	5614939	.	-	0	ID=cds5118;Parent=gene5218;Dbxref=Genbank:NP_629314.1,GeneID:1100607;Name=NP_629314.1;Note=SCP8.29c%2C possible helicase%2C len: 879 aa%3B N-terminal domain similar to SW:RHLE_ECOLI (EMBL:L02123) Escherichia coli  ATP-dependent RNA helicase RhlE%2C 454 aa%3B fasta scores: opt: 884 z-score: 704.8 E(): 8.6e-32%3B 37.2%25 identity in 444 aa overlap. Contains Pfam matches to entries PF00270 DEAD%2C DEAD/DEAH box helicase and PF00271 helicase_C%2C Helicases conserved C-terminal domain and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00039 DEAD-box subfamily ATP-dependent helicases signature. Also contains three sets of different repeats: 10x RU1: RRTRK%2C 4x RU2:AAAKAEAAA and 4x RU3:AAEPA;gbkey=CDS;gene=SCP8.29c;product=helicase;protein_id=NP_629314.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5612342	5612356	.	-	.	ID=id6653;Dbxref=GeneID:1100607;Note=10x conserved repeat unit translated in SCP8.29c (RU1);gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612420	5612434	.	-	.	ID=id6654;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612507	5612521	.	-	.	ID=id6655;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612558	5612584	.	-	.	ID=id6656;Dbxref=GeneID:1100607;Note=4x conserved repeat unit translated in SCP8.29c (RU2);gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612576	5612602	.	-	.	ID=id6657;Dbxref=GeneID:1100607;Note=RU2;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612621	5612635	.	-	.	ID=id6658;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612681	5612695	.	-	.	ID=id6659;Dbxref=GeneID:1100607;Note=4x conserved repeat unit translated in SCP8.29c (RU3);gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612696	5612710	.	-	.	ID=id6660;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612747	5612773	.	-	.	ID=id6661;Dbxref=GeneID:1100607;Note=RU2;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612792	5612806	.	-	.	ID=id6662;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612852	5612866	.	-	.	ID=id6663;Dbxref=GeneID:1100607;Note=RU3;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612867	5612881	.	-	.	ID=id6664;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612917	5612944	.	-	.	ID=id6665;Dbxref=GeneID:1100607;Note=RU2;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5612963	5612977	.	-	.	ID=id6666;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5613020	5613034	.	-	.	ID=id6667;Dbxref=GeneID:1100607;Note=RU3;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5613035	5613049	.	-	.	ID=id6668;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5613077	5613091	.	-	.	ID=id6669;Dbxref=GeneID:1100607;Note=RU3;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	repeat_region	5613131	5613145	.	-	.	ID=id6670;Dbxref=GeneID:1100607;Note=RU1;gbkey=repeat_region;gene=SCP8.29c
NC_003888.3	RefSeq	sequence_feature	5613977	5614222	.	-	.	ID=id6671;Dbxref=GeneID:1100607;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 123.30%2C E-value 4.6e-33;gbkey=misc_feature;gene=SCP8.29c
NC_003888.3	RefSeq	sequence_feature	5614328	5614936	.	-	.	ID=id6672;Dbxref=GeneID:1100607;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 172.60%2C E-value 1.2e-53;gbkey=misc_feature;gene=SCP8.29c
NC_003888.3	RefSeq	sequence_feature	5614520	5614546	.	-	.	ID=id6673;Dbxref=GeneID:1100607;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature;gbkey=misc_feature;gene=SCP8.29c
NC_003888.3	RefSeq	sequence_feature	5614871	5614894	.	-	.	ID=id6674;Dbxref=GeneID:1100607;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCP8.29c
NC_003888.3	RefSeq	ribosome_entry_site	5614940	5614946	.	-	.	ID=id6675;gbkey=RBS
NC_003888.3	RefSeq	gene	5615432	5616214	.	+	.	ID=gene5219;Dbxref=GeneID:1100608;Name=SCP8.30;gbkey=Gene;gene=SCP8.30;gene_biotype=protein_coding;gene_synonym=SCP8.30;locus_tag=SCO5167
NC_003888.3	RefSeq	CDS	5615432	5616214	.	+	0	ID=cds5119;Parent=gene5219;Dbxref=Genbank:NP_629315.1,GeneID:1100608;Name=NP_629315.1;Note=SCP8.30%2C conserved hypothetical protein%2C len: 260 aa%3B similar to TR:O05856 (EMBL:Z95120) Mycobacterium tuberculosis hypothetical 25.1 kD protein MTCY07D11.16%2C 231 aa%3B fasta scores: opt: 599 z-score: 647.2 E(): 1.4e-28%3B 42.5%25 identity in 233 aa overlap. Contains 4x degenerate repeat:T(G/A)G;gbkey=CDS;gene=SCP8.30;product=hypothetical protein;protein_id=NP_629315.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5615480	5615515	.	+	.	ID=id6676;Dbxref=GeneID:1100608;Note=4x degenerate repeat translated in SCP8.30;gbkey=repeat_region;gene=SCP8.30
NC_003888.3	RefSeq	gene	5616330	5616599	.	-	.	ID=gene5220;Dbxref=GeneID:1100609;Name=SCP8.31c;gbkey=Gene;gene=SCP8.31c;gene_biotype=protein_coding;gene_synonym=SCP8.31c;locus_tag=SCO5168
NC_003888.3	RefSeq	CDS	5616330	5616599	.	-	0	ID=cds5120;Parent=gene5220;Dbxref=Genbank:NP_629316.1,GeneID:1100609;Name=NP_629316.1;Note=SCP8.31c%2C possible integral membrane protein%2C len: 89 aa. Contains possible hydrophobic membrane spanning regions. Also high content in alanine and leucine amino acid residues;gbkey=CDS;gene=SCP8.31c;product=hypothetical protein;protein_id=NP_629316.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5616609	5616613	.	-	.	ID=id6677;gbkey=RBS
NC_003888.3	RefSeq	gene	5616843	5617127	.	-	.	ID=gene5221;Dbxref=GeneID:1100610;Name=SCP8.32c;gbkey=Gene;gene=SCP8.32c;gene_biotype=protein_coding;gene_synonym=SCP8.32c;locus_tag=SCO5169
NC_003888.3	RefSeq	CDS	5616843	5617127	.	-	0	ID=cds5121;Parent=gene5221;Dbxref=Genbank:NP_629317.1,GeneID:1100610;Name=NP_629317.1;Note=SCP8.32c%2C possible ATP-binding protein%2C len: 94 aa. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCP8.32c;product=ATP-binding protein;protein_id=NP_629317.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5616960	5616983	.	-	.	ID=id6678;Dbxref=GeneID:1100610;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCP8.32c
NC_003888.3	RefSeq	gene	5617213	5617854	.	-	.	ID=gene5222;Dbxref=GeneID:1100611;Name=SCP8.33c;gbkey=Gene;gene=SCP8.33c;gene_biotype=protein_coding;gene_synonym=SCP8.33c;locus_tag=SCO5170
NC_003888.3	RefSeq	CDS	5617213	5617854	.	-	0	ID=cds5122;Parent=gene5222;Dbxref=Genbank:NP_629318.1,GeneID:1100611;Name=NP_629318.1;Note=SCP8.33c%2C probable tetR-family transcriptional regulator%2C len: 213 aa%3B similar to TR:O53661 (EMBL:AL021929) Mycobacterium tuberculosis regulatory protein MTV034.04%2C 204 aa%3B fasta scores: opt: 309 z-score: 383.4 E(): 6.9e-14%3B 31.3%25 identity in 201 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 42..63 (+3.37 SD);gbkey=CDS;gene=SCP8.33c;product=TetR family transcriptional regulator;protein_id=NP_629318.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5617639	5617779	.	-	.	ID=id6679;Dbxref=GeneID:1100611;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 68.60%2C E-value 1.3e-16;gbkey=misc_feature;gene=SCP8.33c
NC_003888.3	RefSeq	ribosome_entry_site	5617859	5617863	.	-	.	ID=id6680;gbkey=RBS
NC_003888.3	RefSeq	gene	5618029	5618256	.	-	.	ID=gene5223;Dbxref=GeneID:1100612;Name=SCP8.34c;gbkey=Gene;gene=SCP8.34c;gene_biotype=protein_coding;gene_synonym=SCP8.34c;locus_tag=SCO5171
NC_003888.3	RefSeq	CDS	5618029	5618256	.	-	0	ID=cds5123;Parent=gene5223;Dbxref=Genbank:NP_629319.1,GeneID:1100612;Name=NP_629319.1;Note=SCP8.34c%2C unknown%2C len: 75 aa. Highly hydrophilic;gbkey=CDS;gene=SCP8.34c;product=hypothetical protein;protein_id=NP_629319.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5618263	5618266	.	-	.	ID=id6681;gbkey=RBS
NC_003888.3	RefSeq	gene	5618484	5619560	.	+	.	ID=gene5224;Dbxref=GeneID:1100613;Name=SCP8.35;gbkey=Gene;gene=SCP8.35;gene_biotype=protein_coding;gene_synonym=SCP8.35;locus_tag=SCO5172
NC_003888.3	RefSeq	CDS	5618484	5619560	.	+	0	ID=cds5124;Parent=gene5224;Dbxref=Genbank:NP_629320.1,GeneID:1100613;Name=NP_629320.1;Note=SCP8.35%2C possible hydrolase%2C len: 358 aa%3B similar to SW:ACOC_ALCEU (EMBL:M66060) Alcaligenes eutrophus dihydrolipoamide acetyltransferase component of acetoin cleaving system (EC 2.3.1.12) AcoC%2C 373 aa%3B fasta scores: opt: 224 z-score: 254.0 E(): 1.1e-06%3B 29.7%25 identity in 273 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SCP8.35;product=hydrolase;protein_id=NP_629320.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5618715	5619422	.	+	.	ID=id6682;Dbxref=GeneID:1100613;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 85.70%2C E-value 9.5e-22;gbkey=misc_feature;gene=SCP8.35
NC_003888.3	RefSeq	ribosome_entry_site	5619559	5619562	.	+	.	ID=id6683;gbkey=RBS
NC_003888.3	RefSeq	gene	5619569	5621248	.	+	.	ID=gene5225;Dbxref=GeneID:1100614;Name=SCP8.36;gbkey=Gene;gene=SCP8.36;gene_biotype=protein_coding;gene_synonym=SCP8.36;locus_tag=SCO5173
NC_003888.3	RefSeq	CDS	5619569	5621248	.	+	0	ID=cds5125;Parent=gene5225;Dbxref=Genbank:NP_629321.1,GeneID:1100614;Name=NP_629321.1;Note=SCP8.36%2C hypothetical protein%2C len: 559 aa%3B low similarity to TR:Q9XAG2 (EMBL:AL079356) Streptomyces coelicolor possible membrane protein SC6G9.20%2C 303 aa%3B fasta scores: opt: 452 z-score: 362.9 E(): 9.5e-13%3B 34.1%25 identity in 258 aa overlap;gbkey=CDS;gene=SCP8.36;product=hypothetical protein;protein_id=NP_629321.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5621093	5621122	.	+	.	ID=id6684;Dbxref=GeneID:1100614;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SCP8.36
NC_003888.3	RefSeq	sequence_feature	5621286	5621291	.	+	.	ID=id6685;Note=AseI site matched ATTAAT~Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5621286	5621291	.	-	.	ID=id6686;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5621463	5623244	.	+	.	ID=gene5226;Dbxref=GeneID:1100615;Name=SCP8.37;gbkey=Gene;gene=SCP8.37;gene_biotype=protein_coding;gene_synonym=SCP8.37;locus_tag=SCO5174
NC_003888.3	RefSeq	CDS	5621463	5623244	.	+	0	ID=cds5126;Parent=gene5226;Dbxref=Genbank:NP_629322.1,GeneID:1100615;Name=NP_629322.1;Note=SCP8.37%2C possible transferase%2C len: 593 aa%3B C-terminal region similar to TR:CAB92272 (EMBL:AL356595) Streptomyces coelicolor transferase SCC61A.27%2C 436 aa%3B fasta scores: opt: 233 z-score: 251.3 E(): 1.6e-06%3B 29.9%25 identity in 462 aa overlap. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1. Also contains 3x conserved repeat unit: ARSSE;gbkey=CDS;gene=SCP8.37;product=transferase;protein_id=NP_629322.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5621769	5621813	.	+	.	ID=id6687;Dbxref=GeneID:1100615;Note=3x conserved repeat translated in SCP8.37;gbkey=repeat_region;gene=SCP8.37
NC_003888.3	RefSeq	sequence_feature	5622726	5622953	.	+	.	ID=id6688;Dbxref=GeneID:1100615;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 59.90%2C E-value 2.1e-15;gbkey=misc_feature;gene=SCP8.37
NC_003888.3	RefSeq	ribosome_entry_site	5623230	5623233	.	+	.	ID=id6689;Dbxref=GeneID:1100615;gbkey=RBS;gene=SCP8.37
NC_003888.3	RefSeq	gene	5623391	5624458	.	+	.	ID=gene5227;Dbxref=GeneID:1100616;Name=SCP8.38;gbkey=Gene;gene=SCP8.38;gene_biotype=protein_coding;gene_synonym=SCP8.38;locus_tag=SCO5175
NC_003888.3	RefSeq	CDS	5623391	5624458	.	+	0	ID=cds5127;Parent=gene5227;Dbxref=Genbank:NP_629323.1,GeneID:1100616;Name=NP_629323.1;Note=SCP8.38%2C possible integral membrane protein%2C len: 355 aa%3B similar to TR:Q9RWF6 (EMBL:AE001927) Deinococcus radiodurans hypothetical 51.5 kD protein DR0712%2C 494 aa%3B fasta scores: opt: 182 z-score: 183.8 E(): 0.009%3B 30.3%25 identity in 429 aa overlap;gbkey=CDS;gene=SCP8.38;product=hypothetical protein;protein_id=NP_629323.1;transl_table=11
NC_003888.3	RefSeq	gene	5624510	5625622	.	+	.	ID=gene5228;Dbxref=GeneID:1100617;Name=SCP8.39;gbkey=Gene;gene=SCP8.39;gene_biotype=protein_coding;gene_synonym=SCP8.39;locus_tag=SCO5176
NC_003888.3	RefSeq	CDS	5624510	5625622	.	+	0	ID=cds5128;Parent=gene5228;Dbxref=Genbank:NP_629324.1,GeneID:1100617;Name=NP_629324.1;Note=SCP8.39%2C probable reductase%2C len: 370 aa%3B similar to TR:O54256 (EMBL:AJ224512) Streptomyces nogalater  dTDP-4-keto-6-deoxyhexose reductase SnoG%2C 328 aa%3B fasta scores: opt: 316 z-score: 337.4 E(): 2.5e-11%3B 30.5%25 identity in 364 aa overlap;gbkey=CDS;gene=SCP8.39;product=reductase;protein_id=NP_629324.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5625601	5625605	.	+	.	ID=id6690;Dbxref=GeneID:1100617;gbkey=RBS;gene=SCP8.39
NC_003888.3	RefSeq	gene	5625610	5626359	.	+	.	ID=gene5229;Dbxref=GeneID:1100618;Name=2SC3B6.01;gbkey=Gene;gene=2SC3B6.01;gene_biotype=protein_coding;gene_synonym=2SC3B6.01;locus_tag=SCO5177
NC_003888.3	RefSeq	CDS	5625610	5626359	.	+	0	ID=cds5129;Parent=gene5229;Dbxref=Genbank:NP_629325.1,GeneID:1100618;Name=NP_629325.1;Note=2SC3B6.01%2C unknown%2C len: 249 aa;gbkey=CDS;gene=2SC3B6.01;product=hypothetical protein;protein_id=NP_629325.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5626414	5626417	.	+	.	ID=id6691;gbkey=RBS
NC_003888.3	RefSeq	gene	5626423	5627601	.	+	.	ID=gene5230;Dbxref=GeneID:1100619;Name=2SC3B6.02;gbkey=Gene;gene=2SC3B6.02;gene_biotype=protein_coding;gene_synonym=2SC3B6.02;locus_tag=SCO5178
NC_003888.3	RefSeq	CDS	5626423	5627601	.	+	0	ID=cds5130;Parent=gene5230;Dbxref=Genbank:NP_629326.1,GeneID:1100619;Name=NP_629326.1;Note=The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin%2C but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2%2C6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation;gbkey=CDS;gene=2SC3B6.02;product=adenylyltransferase/sulfurtransferase MoeZ;protein_id=NP_629326.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5626537	5626947	.	+	.	ID=id6692;Dbxref=GeneID:1100619;Note=Pfam match to entry PF00899 ThiF_family%2C ThiF family%2C score 216.00%2C E-value 5.4e-61;gbkey=misc_feature;gene=2SC3B6.02
NC_003888.3	RefSeq	sequence_feature	5627290	5627574	.	+	.	ID=id6693;Dbxref=GeneID:1100619;Note=Pfam match to entry PF00581 Rhodanese%2C Rhodanese-like domain%2C score 51.70%2C E-value 1.6e-11;gbkey=misc_feature;gene=2SC3B6.02
NC_003888.3	RefSeq	gene	5627673	5629214	.	-	.	ID=gene5231;Dbxref=GeneID:1100620;Name=2SC3B6.03c;gbkey=Gene;gene=2SC3B6.03c;gene_biotype=protein_coding;gene_synonym=2SC3B6.03c;locus_tag=SCO5179
NC_003888.3	RefSeq	CDS	5627673	5629214	.	-	0	ID=cds5131;Parent=gene5231;Dbxref=Genbank:NP_629327.1,GeneID:1100620;Name=NP_629327.1;Note=2SC3B6.03c%2C peptidase%2C len: 513 aa%3B identical to TR:Q54399 (EMBL:L42759) Streptomyces lividans proteinase SlpE%2C 513 aa and highly similar to Streptomyces coelicolor 2SC3B6.04c%2C 516 aa%3B fasta scores: opt: 1544 z-score: 1384.8 E(): 0%3B 50.2%25 identity in 526 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC3B6.03c;product=peptidase;protein_id=NP_629327.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5627715	5628794	.	-	.	ID=id6694;Dbxref=GeneID:1100620;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 41.50%2C E-value 1.9e-08;gbkey=misc_feature;gene=2SC3B6.03c
NC_003888.3	RefSeq	sequence_feature	5629152	5629184	.	-	.	ID=id6695;Dbxref=GeneID:1100620;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SC3B6.03c
NC_003888.3	RefSeq	ribosome_entry_site	5629217	5629221	.	-	.	ID=id6696;gbkey=RBS
NC_003888.3	RefSeq	gene	5629373	5630923	.	-	.	ID=gene5232;Dbxref=GeneID:1100621;Name=2SC3B6.04c;gbkey=Gene;gene=2SC3B6.04c;gene_biotype=protein_coding;gene_synonym=2SC3B6.04c;locus_tag=SCO5180
NC_003888.3	RefSeq	CDS	5629373	5630923	.	-	0	ID=cds5132;Parent=gene5232;Dbxref=Genbank:NP_629328.1,GeneID:1100621;Name=NP_629328.1;Note=2SC3B6.04c%2C peptidase%2C len: 516 aa%3B highly similar to TR:Q54399 (EMBL:L42759) Streptomyces lividans proteinase SlpE%2C 513 aa%3B fasta scores: opt: 1543 z-score: 1741.5 E(): 0%3B 50.2%25 identity in 526 aa overlap and to Streptomyces coelicolor peptidase 2SC3B6.03c%2C 513 aa%3B fasta scores: opt: 1544 z-score: 1465.5 E(): 0%3B 50.2%25 identity in 526 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC3B6.04c;product=peptidase;protein_id=NP_629328.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5629415	5630515	.	-	.	ID=id6697;Dbxref=GeneID:1100621;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 52.00%2C E-value 1.3e-11;gbkey=misc_feature;gene=2SC3B6.04c
NC_003888.3	RefSeq	sequence_feature	5630846	5630878	.	-	.	ID=id6698;Dbxref=GeneID:1100621;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SC3B6.04c
NC_003888.3	RefSeq	gene	5631004	5633781	.	-	.	ID=gene5233;Dbxref=GeneID:1100622;Name=2SC3B6.05c;gbkey=Gene;gene=2SC3B6.05c;gene_biotype=protein_coding;gene_synonym=2SC3B6.05c;locus_tag=SCO5181
NC_003888.3	RefSeq	CDS	5631004	5633781	.	-	0	ID=cds5133;Parent=gene5233;Dbxref=Genbank:NP_629329.1,GeneID:1100622;Name=NP_629329.1;Note=2SC3B6.05c%2C possible integral membrane protein%2C len: 925 aa%3B similar to TR:O53781 (EMBL:AL021942) Mycobacterium tuberculosis hypothetical 84.0 kD protein RV0585c%2C 795 aa%3B fasta scores: opt: 618 z-score: 636.0 E(): 5.9e-28%3B 28.1%25 identity in 884 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC3B6.05c;product=hypothetical protein;protein_id=NP_629329.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5633784	5633787	.	-	.	ID=id6699;gbkey=RBS
NC_003888.3	RefSeq	gene	5633823	5634374	.	+	.	ID=gene5234;Dbxref=GeneID:1100623;Name=2SC3B6.06;gbkey=Gene;gene=2SC3B6.06;gene_biotype=protein_coding;gene_synonym=2SC3B6.06;locus_tag=SCO5182
NC_003888.3	RefSeq	CDS	5633823	5634374	.	+	0	ID=cds5134;Parent=gene5234;Dbxref=Genbank:NP_629330.1,GeneID:1100623;Name=NP_629330.1;Note=2SC3B6.06%2C conserved hypothetical protein%2C len: 183 aa%3B similar to TR:Q9RX87 (EMBL:AE001902) Deinococcus radiodurans conserved hypothetical protein DR0428%2C 139 aa%3B fasta scores: opt: 187 z-score: 230.6 E(): 2.2e-05%3B 35.2%25 identity in 122 aa overlap;gbkey=CDS;gene=2SC3B6.06;product=hypothetical protein;protein_id=NP_629330.1;transl_table=11
NC_003888.3	RefSeq	gene	5634641	5638120	.	+	.	ID=gene5235;Dbxref=GeneID:1100624;Name=2SC3B6.07;gbkey=Gene;gene=2SC3B6.07;gene_biotype=protein_coding;gene_synonym=2SC3B6.07;locus_tag=SCO5183
NC_003888.3	RefSeq	CDS	5634641	5638120	.	+	0	ID=cds5135;Parent=gene5235;Dbxref=Genbank:NP_629331.1,GeneID:1100624;Name=NP_629331.1;Note=2SC3B6.07%2C possible ATP-dependent DNA helicase%2C len: 1159 aa%3B similar to TR:O53347 (EMBL:AL021646) Mycobacterium tuberculosis  ATP-dependent DNA helicase%2C MTV014.45c%2C 1101 aa%3B fasta scores: opt: 349 z-score: 368.0 E(): 5e-13%3B 29.2%25 identity in 1144 aa overlap to SW:UVRD_ECOLI (EMBL:M87049) Escherichia coli DNA helicase II (EC 3.6.1.-) UvrD%2C 720 aa%3B fasta scores: opt: 241 z-score: 255.5 E(): 9.2e-07%3B 26.3%25 identity in 800 aa overlap and to Streptomyces coelicolor 2SC3B6.08%2C 1222 aa%3B fasta scores: opt: 406 z-score: 336.0 E(): 4.2e-13%3B30.4%25 identity in 977 aa overlap. Contains Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains 5x conserved repeat unit: ADAD;gbkey=CDS;gene=2SC3B6.07;product=ATP-dependent DNA helicase;protein_id=NP_629331.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5634752	5635960	.	+	.	ID=id6700;Dbxref=GeneID:1100624;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 227.60%2C E-value 1.8e-64;gbkey=misc_feature;gene=2SC3B6.07
NC_003888.3	RefSeq	sequence_feature	5634809	5634832	.	+	.	ID=id6701;Dbxref=GeneID:1100624;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC3B6.07
NC_003888.3	RefSeq	repeat_region	5636084	5636161	.	+	.	ID=id6702;Dbxref=GeneID:1100624;Note=5x degenerate repeat unit translated in 2SC3B6.07;gbkey=repeat_region;gene=2SC3B6.07
NC_003888.3	RefSeq	gene	5638145	5641813	.	+	.	ID=gene5236;Dbxref=GeneID:1100625;Name=2SC3B6.08;gbkey=Gene;gene=2SC3B6.08;gene_biotype=protein_coding;gene_synonym=2SC3B6.08;locus_tag=SCO5184
NC_003888.3	RefSeq	CDS	5638145	5641813	.	+	0	ID=cds5136;Parent=gene5236;Dbxref=Genbank:NP_629332.1,GeneID:1100625;Name=NP_629332.1;Note=2SC3B6.08%2C possible ATP-dependent DNA helicase%2C len: 1222 aa%3B similar to TR::O53347 (EMBL:AL021646) Mycobacterium tuberculosis  ATP-dependent DNA helicase%2C MTV014.45c%2C 1101 aa%3B fasta scores: opt: 1209 z-score: 1062.9 E(): 0%3B 38.4%25 identity in 1199 aa overlap to SW:HELD_ECOLI (EMBL:J04726) Escherichia coli helicase IV (EC 3.6.1.-) HelD%2C 648 aa%3B fasta scores: opt: 216 z-score: 194.6 E(): 0.0023%3B 25.3%25 identity in 471 aa overlap and to Streptomyces coelicolor 2SC3B6.07%2C 1159 aa%3B fasta scores: opt: 406 z-score: 293.0 E(): 1e-10%3B 30.2%25 identity in 977 aa overlap. Contains Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SC3B6.08;product=ATP-dependent DNA helicase;protein_id=NP_629332.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5638352	5639773	.	+	.	ID=id6703;Dbxref=GeneID:1100625;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 286.20%2C E-value 4e-82;gbkey=misc_feature;gene=2SC3B6.08
NC_003888.3	RefSeq	sequence_feature	5638409	5638432	.	+	.	ID=id6704;Dbxref=GeneID:1100625;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC3B6.08
NC_003888.3	RefSeq	gene	5641824	5643236	.	+	.	ID=gene5237;Dbxref=GeneID:1100626;Name=2SC3B6.09;gbkey=Gene;gene=2SC3B6.09;gene_biotype=protein_coding;gene_synonym=2SC3B6.09;locus_tag=SCO5185
NC_003888.3	RefSeq	CDS	5641824	5643236	.	+	0	ID=cds5137;Parent=gene5237;Dbxref=Genbank:NP_629333.1,GeneID:1100626;Name=NP_629333.1;Note=2SC3B6.09%2C possible peptidase%2C len: 470 aa%3B similar to TR:AAF73713 (EMBL:AE002246) Chlamydophila pneumoniae AR39 peptidase%2C M20/M25/M40 family CP0876%2C 439 aa%3B fasta scores: opt: 809 z-score: 938.0 E(): 0%3B 33.6%25 identity in 455 aa overlap. Contains Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40;gbkey=CDS;gene=2SC3B6.09;product=peptidase;protein_id=NP_629333.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5641902	5643053	.	+	.	ID=id6705;Dbxref=GeneID:1100626;Note=Pfam match to entry PF01546 Peptidase_M20%2C Peptidase family M20/M25/M40%2C score 212.90%2C E-value 4e-60;gbkey=misc_feature;gene=2SC3B6.09
NC_003888.3	RefSeq	gene	5643386	5644342	.	+	.	ID=gene5238;Dbxref=GeneID:1100627;Name=2SC3B6.10;gbkey=Gene;gene=2SC3B6.10;gene_biotype=protein_coding;gene_synonym=2SC3B6.10;locus_tag=SCO5186
NC_003888.3	RefSeq	CDS	5643386	5644342	.	+	0	ID=cds5138;Parent=gene5238;Dbxref=Genbank:NP_629334.1,GeneID:1100627;Name=NP_629334.1;Note=2SC3B6.10%2C conserved hypothetical protein%2C len: 318 aa%3B similar to TR:O53345 (EMBL:AL021646) Mycobacterium tuberculosis hypothetical 33.8 kD protein MTV014.43c%2C 313 aa%3B fasta scores: opt: 334 z-score: 389.2 E(): 3.3e-14%3B 33.3%25 identity in 318 aa overlap;gbkey=CDS;gene=2SC3B6.10;product=hypothetical protein;protein_id=NP_629334.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	5644363	5644408	.	+	.	ID=id6706;Note=probable stemloop. Score 56: 20/21 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5644429	5644671	.	-	.	ID=gene5239;Dbxref=GeneID:1100628;Name=2SC3B6.11c;gbkey=Gene;gene=2SC3B6.11c;gene_biotype=protein_coding;gene_synonym=2SC3B6.11c;locus_tag=SCO5187
NC_003888.3	RefSeq	CDS	5644429	5644671	.	-	0	ID=cds5139;Parent=gene5239;Dbxref=Genbank:NP_629335.1,GeneID:1100628;Name=NP_629335.1;Note=2SC3B6.11c%2C possible glutaredoxin-like protein%2C len: 80 aa%3B similar to SW:NRDH_LACLC (EMBL:X92690) Lactococcus lactis glutaredoxin-like protein NrdH%2C 72 aa%3B fasta scores: opt: 119 z-score: 176.0 E(): 0.024%3B 35.6%25 identity in 59 aa overlap. Contains match to Prosite entry PS00194 Thioredoxin family active site;gbkey=CDS;gene=2SC3B6.11c;product=glutaredoxin-like protein;protein_id=NP_629335.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5644603	5644659	.	-	.	ID=id6707;Dbxref=GeneID:1100628;Note=PS00194 Thioredoxin family active site;gbkey=misc_feature;gene=2SC3B6.11c
NC_003888.3	RefSeq	gene	5644716	5647073	.	+	.	ID=gene5240;Dbxref=GeneID:1100629;Name=2SC3B6.12;gbkey=Gene;gene=2SC3B6.12;gene_biotype=protein_coding;gene_synonym=2SC3B6.12;locus_tag=SCO5188
NC_003888.3	RefSeq	CDS	5644716	5647073	.	+	0	ID=cds5140;Parent=gene5240;Dbxref=Genbank:NP_629336.1,GeneID:1100629;Name=NP_629336.1;Note=2SC3B6.12%2C probable ATP-dependent DNA helicase%2C len: 785 aa%3B similar to SW:UVRD_ECOLI (EMBL:M87049) Escherichia coli DNA helicase II (EC 3.6.1.-) UvrD%2C 720 aa%3B fasta scores: opt: 649 z-score: 632.5 E(): 9.2e-28%3B 31.6%25 identity in 643 aa overlap. Contains 2x Pfam matches to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C Pfam match to entry PF00570 HRDC%2C HRDC domain and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SC3B6.12;product=ATP-dependent DNA helicase;protein_id=NP_629336.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5644935	5645192	.	+	.	ID=id6708;Dbxref=GeneID:1100629;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 109.50%2C E-value 3.2e-29;gbkey=misc_feature;gene=2SC3B6.12
NC_003888.3	RefSeq	sequence_feature	5644992	5645015	.	+	.	ID=id6709;Dbxref=GeneID:1100629;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC3B6.12
NC_003888.3	RefSeq	sequence_feature	5645415	5646119	.	+	.	ID=id6710;Dbxref=GeneID:1100629;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 218.20%2C E-value 1.2e-61;gbkey=misc_feature;gene=2SC3B6.12
NC_003888.3	RefSeq	sequence_feature	5646822	5647064	.	+	.	ID=id6711;Dbxref=GeneID:1100629;Note=Pfam match to entry PF00570 HRDC%2C HRDC domain%2C score 43.70%2C E-value 4.1e-09;gbkey=misc_feature;gene=2SC3B6.12
NC_003888.3	RefSeq	ribosome_entry_site	5647154	5647158	.	+	.	ID=id6712;gbkey=RBS
NC_003888.3	RefSeq	gene	5647169	5647570	.	+	.	ID=gene5241;Dbxref=GeneID:1100630;Name=2SC3B6.13;gbkey=Gene;gene=2SC3B6.13;gene_biotype=protein_coding;gene_synonym=2SC3B6.13;locus_tag=SCO5189
NC_003888.3	RefSeq	CDS	5647169	5647570	.	+	0	ID=cds5141;Parent=gene5241;Dbxref=Genbank:NP_629337.1,GeneID:1100630;Name=NP_629337.1;Note=2SC3B6.13%2C unknown%2C len: 133 aa;gbkey=CDS;gene=2SC3B6.13;product=hypothetical protein;protein_id=NP_629337.1;transl_table=11
NC_003888.3	RefSeq	gene	5647747	5648115	.	+	.	ID=gene5242;Dbxref=GeneID:1100631;Name=2SC3B6.14;gbkey=Gene;gene=2SC3B6.14;gene_biotype=protein_coding;gene_synonym=2SC3B6.14;locus_tag=SCO5190
NC_003888.3	RefSeq	CDS	5647747	5648115	.	+	0	ID=cds5142;Parent=gene5242;Dbxref=Genbank:NP_629338.1,GeneID:1100631;Name=NP_629338.1;Note=2SC3B6.14%2C possible DNA-binding protein%2C len: 122 aa%3B similar to TR:Q9X952 (EMBL:AJ239087) Streptomyces coelicolor hypothetical 9.7 kD protein WblE%2C 85 aa%3B fasta scores: opt: 183 z-score: 243.0 E(): 4.6e-06%3B 40.5%25 identity in 74 aa overlap and to TR:Q9S426 (EMBL:AF164439) Mycobacterium smegmatis WhmD%2C 129 aa%3B fasta scores: opt: 161 z-score: 213.2 E(): 0.00021%3B 29.0%25 identity in 93 aa overlap. Contains Pfam match to entry PF02178 AT_hook%2C DNA binding domain with preference for A/T rich regions and match to Prosite entry PS00354 HMG-I and HMG-Y DNA-binding domain (A+T-hook);gbkey=CDS;gene=2SC3B6.14;product=DNA-binding protein;protein_id=NP_629338.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5648065	5648097	.	+	.	ID=id6713;Dbxref=GeneID:1100631;Note=PS00354 HMG-I and HMG-Y DNA-binding domain (A+T-hook);gbkey=misc_feature;gene=2SC3B6.14
NC_003888.3	RefSeq	sequence_feature	5648071	5648109	.	+	.	ID=id6714;Dbxref=GeneID:1100631;Note=Pfam match to entry PF02178 AT_hook%2C DNA binding domain with preference for A/T rich regions%2C score 17.00%2C E-value 0.23;gbkey=misc_feature;gene=2SC3B6.14
NC_003888.3	RefSeq	gene	5648112	5648435	.	+	.	ID=gene5243;Dbxref=GeneID:1100632;Name=2SC3B6.15;gbkey=Gene;gene=2SC3B6.15;gene_biotype=protein_coding;gene_synonym=2SC3B6.15;locus_tag=SCO5191
NC_003888.3	RefSeq	CDS	5648112	5648435	.	+	0	ID=cds5143;Parent=gene5243;Dbxref=Genbank:NP_629339.1,GeneID:1100632;Name=NP_629339.1;Note=2SC3B6.15%2C unknown%2C len: 107 aa;gbkey=CDS;gene=2SC3B6.15;product=hypothetical protein;protein_id=NP_629339.1;transl_table=11
NC_003888.3	RefSeq	gene	5648569	5649978	.	-	.	ID=gene5244;Dbxref=GeneID:1100633;Name=2SC3B6.16c;gbkey=Gene;gene=2SC3B6.16c;gene_biotype=protein_coding;gene_synonym=2SC3B6.16c;locus_tag=SCO5192
NC_003888.3	RefSeq	CDS	5648569	5649978	.	-	0	ID=cds5144;Parent=gene5244;Dbxref=Genbank:NP_629340.1,GeneID:1100633;Name=NP_629340.1;Note=2SC3B6.16c%2C hypothetical protein%2C len: 469 aa%3B similar to TR:O53343 (EMBL:AL021646) Mycobacterium tuberculosis ABC-transporter ATP binding protein MTV014.41%2C 447 aa%3B fasta scores: opt: 1156 z-score: 1301.9 E(): 0%3B 45.3%25 identity in 393 aa overlap;gbkey=CDS;gene=2SC3B6.16c;product=hypothetical protein;protein_id=NP_629340.1;transl_table=11
NC_003888.3	RefSeq	gene	5649971	5651299	.	-	.	ID=gene5245;Dbxref=GeneID:1100634;Name=2SC3B6.17c;gbkey=Gene;gene=2SC3B6.17c;gene_biotype=protein_coding;gene_synonym=2SC3B6.17c;locus_tag=SCO5193
NC_003888.3	RefSeq	CDS	5649971	5651299	.	-	0	ID=cds5145;Parent=gene5245;Dbxref=Genbank:NP_629341.1,GeneID:1100634;Name=NP_629341.1;Note=2SC3B6.17c%2C possible hypothetical protein%2C len: 442 aa%3B similar to TR:O53342 (EMBL:AL021646) Mycobacterium tuberculosis hypothetical 31.6 kD protein MTV014.40%2C 299 aa%3B fasta scores: opt: 233 z-score: 233.2 E(): 1.6e-05%3B 29.9%25 identity in 261 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC3B6.17c;product=hypothetical protein;protein_id=NP_629341.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5649983	5649988	.	-	.	ID=id6715;Dbxref=GeneID:1100634;gbkey=RBS;gene=2SC3B6.17c
NC_003888.3	RefSeq	gene	5651506	5652012	.	+	.	ID=gene5246;Dbxref=GeneID:1100635;Name=2SC3B6.18;gbkey=Gene;gene=2SC3B6.18;gene_biotype=protein_coding;gene_synonym=2SC3B6.18;locus_tag=SCO5194
NC_003888.3	RefSeq	CDS	5651506	5652012	.	+	0	ID=cds5146;Parent=gene5246;Dbxref=Genbank:NP_629342.1,GeneID:1100635;Name=NP_629342.1;Note=2SC3B6.18%2C hypothetical protein%2C len: 168 aa%3B similar to TR:CAB72040 (EMBL:AJ391262) Neisseria meningitidis hypothetical 26.6 kD protein RNI5%2C 230 aa%3B fasta scores: opt: 249 z-score: 315.5 E(): 4.2e-10%3B 41.7%25 identity in 103 aa overlap;gbkey=CDS;gene=2SC3B6.18;product=hypothetical protein;protein_id=NP_629342.1;transl_table=11
NC_003888.3	RefSeq	gene	5652152	5653906	.	+	.	ID=gene5247;Dbxref=GeneID:1100636;Name=2SC3B6.19;gbkey=Gene;gene=2SC3B6.19;gene_biotype=protein_coding;gene_synonym=2SC3B6.19;locus_tag=SCO5195
NC_003888.3	RefSeq	CDS	5652152	5653906	.	+	0	ID=cds5147;Parent=gene5247;Dbxref=Genbank:NP_629343.1,GeneID:1100636;Name=NP_629343.1;Note=2SC3B6.19%2C hypothetical protein%2C len: 584 aa%3B N-terminal region similar to N-terminal region of TR:Q9RSA4 (EMBL:AE002055) Deinococcus radiodurans tellurium resistance protein TerA DR2223%2C 400 aa%3B fasta scores: opt: 552 z-score: 357.3 E(): 1.9e-12%3B 40.6%25 identity in 239 aa overlap and C-terminal region similar to TR:Q9RWP1 (EMBL:AE001920) Deinococcus radiodurans conserved hypothetical protein DR0625%2C 254 aa%3B blastp scores: Score %3D 262 (92.2 bits)%2C Expect %3D 7.4e-22%2C P %3D 7.4e-22%2C Identities %3D 68/208 (32%25)%2C Positives %3D 117/208 (56%25);gbkey=CDS;gene=2SC3B6.19;product=hypothetical protein;protein_id=NP_629343.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5652686	5653222	.	+	.	ID=id6716;Dbxref=GeneID:1100636;Note=High content in alanine%2C proline%2C glycine and glutamine amino acid residues region. Also high G+C content (84.91%25);gbkey=misc_feature;gene=2SC3B6.19
NC_003888.3	RefSeq	gene	5653920	5654600	.	+	.	ID=gene5248;Dbxref=GeneID:1100637;Name=2SC3B6.20;gbkey=Gene;gene=2SC3B6.20;gene_biotype=protein_coding;gene_synonym=2SC3B6.20;locus_tag=SCO5196
NC_003888.3	RefSeq	CDS	5653920	5654600	.	+	0	ID=cds5148;Parent=gene5248;Dbxref=Genbank:NP_629344.1,GeneID:1100637;Name=NP_629344.1;Note=2SC3B6.20%2C conserved hypothetical protein%2C len: 226 aa%3B similar to TR:CAB93731 (EMBL:AL357613) Streptomyces coelicolor hypothetical 23.8 kD protein SC5F8.03c%2C 225 aa%3B fasta scores: opt: 439 z-score: 523.3 E(): 1.1e-21%3B 37.8%25 identity in 222 aa overlap;gbkey=CDS;gene=2SC3B6.20;product=hypothetical protein;protein_id=NP_629344.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5654604	5654607	.	+	.	ID=id6717;gbkey=RBS
NC_003888.3	RefSeq	gene	5654618	5655373	.	+	.	ID=gene5249;Dbxref=GeneID:1100638;Name=2SC3B6.21;gbkey=Gene;gene=2SC3B6.21;gene_biotype=protein_coding;gene_synonym=2SC3B6.21;locus_tag=SCO5197
NC_003888.3	RefSeq	CDS	5654618	5655373	.	+	0	ID=cds5149;Parent=gene5249;Dbxref=Genbank:NP_629345.1,GeneID:1100638;Name=NP_629345.1;Note=2SC3B6.21%2C conserved hypothetical protein%2C len: 251 aa%3B similar to TR:CAB93731 (EMBL:AL357613) Streptomyces coelicolor hypothetical 23.8 kD protein SC5F8.03c%2C 225 aa%3B fasta scores: opt: 449 z-score: 539.1 E(): 1.5e-22%3B 35.7%25 identity in 230 aa overlap;gbkey=CDS;gene=2SC3B6.21;product=hypothetical protein;protein_id=NP_629345.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	5655380	5655445	.	+	.	ID=id6718;Note=probable stemloop. Score 50: 25/32 (78%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5655433	5655948	.	-	.	ID=gene5250;Dbxref=GeneID:1100639;Name=2SC3B6.22c;gbkey=Gene;gene=2SC3B6.22c;gene_biotype=protein_coding;gene_synonym=2SC3B6.22c;locus_tag=SCO5198
NC_003888.3	RefSeq	CDS	5655433	5655948	.	-	0	ID=cds5150;Parent=gene5250;Dbxref=Genbank:NP_629346.1,GeneID:1100639;Name=NP_629346.1;Note=2SC3B6.22c%2C hypothetical protein%2C len: 171 aa%3B low similarity to TR:Q9S2D5 (EMBL:AL110470) Streptomyces coelicolor MutT domain containing protein%2C 204 aa%3B fasta scores: opt: 139 z-score: 184.0 E(): 0.0088%3B 30.8%25 identity in 120 aa overlap;gbkey=CDS;gene=2SC3B6.22c;product=hypothetical protein;protein_id=NP_629346.1;transl_table=11
NC_003888.3	RefSeq	gene	5655945	5657408	.	-	.	ID=gene5251;Dbxref=GeneID:1100640;Name=2SC3B6.23c;gbkey=Gene;gene=2SC3B6.23c;gene_biotype=protein_coding;gene_synonym=2SC3B6.23c;locus_tag=SCO5199
NC_003888.3	RefSeq	CDS	5655945	5657408	.	-	0	ID=cds5151;Parent=gene5251;Dbxref=Genbank:NP_629347.1,GeneID:1100640;Name=NP_629347.1;Note=2SC3B6.23c%2C conserved hypothetical protein%2C len: 487 aa%3B similar to TR:O53341 (EMBL:AL021646) Mycobacterium tuberculosis hypothetical 49.4 kD protein%2C 472 aa%3B fasta scores: opt: 1382 z-score: 1331.8 E(): 0%3B 46.2%25 identity in 489 aa overlap;gbkey=CDS;gene=2SC3B6.23c;product=hypothetical protein;protein_id=NP_629347.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5657415	5657418	.	-	.	ID=id6719;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5657590	5657593	.	+	.	ID=id6720;gbkey=RBS
NC_003888.3	RefSeq	gene	5657601	5658722	.	+	.	ID=gene5252;Dbxref=GeneID:1100641;Name=2SC3B6.24;gbkey=Gene;gene=2SC3B6.24;gene_biotype=protein_coding;gene_synonym=2SC3B6.24;locus_tag=SCO5200
NC_003888.3	RefSeq	CDS	5657601	5658722	.	+	0	ID=cds5152;Parent=gene5252;Dbxref=Genbank:NP_629348.1,GeneID:1100641;Name=NP_629348.1;Note=2SC3B6.24%2C membrane protein%2C len: 373 aa%3B similar to TR:Q9WX08 (EMBL:AL079345) Streptomyces coelicolor  epimerase SCE68.24c%2C 353 aa%3B fasta scores: opt: 307 z-score: 353.0 E(): 3.4e-12%3B 29.1%25 identity in 320 aa overlap. Contains possible N-terminal region signal sequence peptide and possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=2SC3B6.24;product=hypothetical protein;protein_id=NP_629348.1;transl_table=11
NC_003888.3	RefSeq	gene	5658833	5659291	.	+	.	ID=gene5253;Dbxref=GeneID:1100642;Name=2SC3B6.25;gbkey=Gene;gene=2SC3B6.25;gene_biotype=protein_coding;gene_synonym=2SC3B6.25;locus_tag=SCO5201
NC_003888.3	RefSeq	CDS	5658833	5659291	.	+	0	ID=cds5153;Parent=gene5253;Dbxref=Genbank:NP_629349.1,GeneID:1100642;Name=NP_629349.1;Note=2SC3B6.25%2C moaE-like protein%2C len: 152 aa%3B similar to SW:MOAE_ECOLI (EMBL:X70420) Escherichia coli molybdopterin [mpt] converting factor%2C subunit 2 MoaE%2C 149 aa%3B fasta scores: opt: 255 z-score: 317.2 E(): 3.3e-10%3B 33.3%25 identity in 129 aa overlap;gbkey=CDS;gene=2SC3B6.25;product=moaE-like protein;protein_id=NP_629349.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5659402	5659407	.	+	.	ID=id6721;gbkey=RBS
NC_003888.3	RefSeq	gene	5659650	5660744	.	+	.	ID=gene5254;Dbxref=GeneID:1100643;Name=2SC3B6.26;gbkey=Gene;gene=2SC3B6.26;gene_biotype=protein_coding;gene_synonym=2SC3B6.26;locus_tag=SCO5202
NC_003888.3	RefSeq	CDS	5659650	5660744	.	+	0	ID=cds5154;Parent=gene5254;Dbxref=Genbank:NP_629350.1,GeneID:1100643;Name=NP_629350.1;Note=2SC3B6.26%2C possible hypothetical protein%2C len: 364 aa%3B similar to TR:O53340 (EMBL:AL021646) Mycobacterium tuberculosis hypothetical 35.5. kD protein%2C 340 aa%3B fasta scores: opt: 430 z-score: 467.4 E(): 1.4e-18%3B 41.3%25 identity in 361 aa overlap. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=2SC3B6.26;product=hypothetical protein;protein_id=NP_629350.1;transl_table=11
NC_003888.3	RefSeq	gene	5660775	5661446	.	-	.	ID=gene5255;Dbxref=GeneID:1100644;Name=2SC3B6.27c;gbkey=Gene;gene=2SC3B6.27c;gene_biotype=protein_coding;gene_synonym=2SC3B6.27c;locus_tag=SCO5203
NC_003888.3	RefSeq	CDS	5660775	5661446	.	-	0	ID=cds5155;Parent=gene5255;Dbxref=Genbank:NP_629351.1,GeneID:1100644;Name=NP_629351.1;Note=2SC3B6.27c%2C unknown%2C len: 223 aa. Contains two TTA leucine codons%2C possible targets for bldA regulation;gbkey=CDS;gene=2SC3B6.27c;product=hypothetical protein;protein_id=NP_629351.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5661372	5661374	.	-	.	ID=id6722;Dbxref=GeneID:1100644;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SC3B6.27c
NC_003888.3	RefSeq	sequence_feature	5661381	5661383	.	-	.	ID=id6723;Dbxref=GeneID:1100644;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SC3B6.27c
NC_003888.3	RefSeq	gene	5661482	5664484	.	+	.	ID=gene5256;Dbxref=GeneID:1100645;Name=2SC3B6.28;gbkey=Gene;gene=2SC3B6.28;gene_biotype=protein_coding;gene_synonym=2SC3B6.28,SC7E4.01;locus_tag=SCO5204
NC_003888.3	RefSeq	CDS	5661482	5664484	.	+	0	ID=cds5156;Parent=gene5256;Dbxref=Genbank:NP_733657.1,GeneID:1100645;Name=NP_733657.1;Note=SC7E4.01%2C hypothetical protein (fragment)%2C len: >220 aa%3B similar to C-terminal part of TR:O32904 (EMBL:Z98271) Mycobacterium leprae hypothetical 29.1 kD protein MLCB1779.46%2C 277 aa%3B fasta scores: opt: 236 z-score: 242.2 E(): 5.1e-06%3B 33.5%25 identity in 191 aa overlap. Contains possible colied-coil region at aprox. residues 151..172 and a 5x degenerate repeat: (G/D/S)DK(2)~2SC3B6.28%2C possible integral membrane protein (fragment)%2C len: >815 aa%3B similar to TR:O53609 (EMBL:AL021428) Mycobacterium tuberculosis membrane protein MTV030.07%2C 979 aa%3B fasta scores: opt: 992 z-score: 1094.5 E(): 0%3B 41.1%25 identity in 829 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC3B6.28;product=hypothetical protein;protein_id=NP_733657.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5664359	5664433	.	+	.	ID=id6724;Dbxref=GeneID:1100645;Note=5x degenerate repeat unit translated in SC7E4.01;gbkey=repeat_region;gene=2SC3B6.28
NC_003888.3	RefSeq	gene	5664562	5664635	.	+	.	ID=gene5257;Dbxref=GeneID:3240055;Name=SCOt52;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt52
NC_003888.3	RefSeq	tRNA	5664562	5664635	.	+	.	ID=rna69;Parent=gene5257;Dbxref=GeneID:3240055;Note=tRNA Met anticodon CAT%2C Cove score 79.35;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	exon	5664562	5664635	.	+	.	ID=id6725;Parent=rna69;Dbxref=GeneID:3240055;Note=tRNA Met anticodon CAT%2C Cove score 79.35;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	stem_loop	5664664	5664704	.	+	.	ID=id6726;Note=844 CACGAAGGCCCGGATTCC 861 - 867 GGAATCCGGGCCTTCGTG 884. Score 54: 18/18 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5664876	5666699	.	+	.	ID=gene5258;Dbxref=GeneID:1100646;Name=SC7E4.02;gbkey=Gene;gene=SC7E4.02;gene_biotype=protein_coding;gene_synonym=SC7E4.02;locus_tag=SCO5205
NC_003888.3	RefSeq	CDS	5664876	5666699	.	+	0	ID=cds5157;Parent=gene5258;Dbxref=Genbank:NP_629352.1,GeneID:1100646;Name=NP_629352.1;Note=SC7E4.02%2C hypothetical protein%2C len: 607 aa%3B similar to TR:CAB83499 (EMBL:AL162752) Neisseria meningitidis hypothetical 51.6 kD protein NMA0184%2C 468 aa%3B fasta scores: opt: 268 z-score: 307.6 E(): 1.2e-09%3B 29.5%25 identity in 528 aa overlap;gbkey=CDS;gene=SC7E4.02;product=hypothetical protein;protein_id=NP_629352.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5666803	5667488	.	-	.	ID=id6727;Note=previously sequenced DNA fragment. EMBL:AF186372 Streptomyces coelicolor A3(2) CatR (catR) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5666820	5666893	.	-	.	ID=gene5259;Dbxref=GeneID:3240056;Name=SCOt53;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt53
NC_003888.3	RefSeq	tRNA	5666820	5666893	.	-	.	ID=rna70;Parent=gene5259;Dbxref=GeneID:3240056;Note=tRNA Met anticodon CAT%2C Cove score 79.35;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	exon	5666820	5666893	.	-	.	ID=id6728;Parent=rna70;Dbxref=GeneID:3240056;Note=tRNA Met anticodon CAT%2C Cove score 79.35;gbkey=tRNA;product=tRNA-Met
NC_003888.3	RefSeq	gene	5666944	5667360	.	-	.	ID=gene5260;Dbxref=GeneID:1100647;Name=catR;gbkey=Gene;gene=catR;gene_biotype=protein_coding;gene_synonym=catR,SC7E4.03c;locus_tag=SCO5206
NC_003888.3	RefSeq	CDS	5666944	5667360	.	-	0	ID=cds5158;Parent=gene5260;Dbxref=Genbank:NP_629353.1,GeneID:1100647;Name=NP_629353.1;Note=SC7E4.03c%2C catR%2C hydrogen peroxide sensitive repressor%2C len: 138 aa%3B identical to previously sequenced TR:Q9RN70 (EMBL:AF186372) Streptomyces coelicolor hydrogen peroxide sensitive repressor CatR%2C 138 aa. Contains Pfam match to entry PF01475 FUR%2C Ferric uptake regulator family;gbkey=CDS;gene=catR;product=hydrogen peroxide sensitive repressor;protein_id=NP_629353.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5666974	5667333	.	-	.	ID=id6729;Dbxref=GeneID:1100647;Note=Pfam match to entry PF01475 FUR%2C Ferric uptake regulator family%2C score 99.80%2C E-value 5.2e-26;gbkey=misc_feature;gene=catR
NC_003888.3	RefSeq	gene	5667547	5667984	.	-	.	ID=gene5261;Dbxref=GeneID:1100648;Name=SC7E4.04c;gbkey=Gene;gene=SC7E4.04c;gene_biotype=protein_coding;gene_synonym=SC7E4.04c;locus_tag=SCO5207
NC_003888.3	RefSeq	CDS	5667547	5667984	.	-	0	ID=cds5159;Parent=gene5261;Dbxref=Genbank:NP_629354.1,GeneID:1100648;Name=NP_629354.1;Note=SC7E4.04c%2C hypothetical protein%2C len: 145 aa%3B similar to TR:Q9YFH9 (EMBL:AP000058) Aeropyrum pernix hypothetical 15.7 kD protein APE0267%2C 143 aa%3B fasta scores: opt: 220 z-score: 282.8 E(): 2.8e-08%3B 34.1%25 identity in 126 aa overlap. Contains 2x Pfam match to entry PF00571 CBS%2C CBS domain;gbkey=CDS;gene=SC7E4.04c;product=hypothetical protein;protein_id=NP_629354.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5667589	5667747	.	-	.	ID=id6730;Dbxref=GeneID:1100648;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 38.90%2C E-value 1.1e-07;gbkey=misc_feature;gene=SC7E4.04c
NC_003888.3	RefSeq	sequence_feature	5667781	5667942	.	-	.	ID=id6731;Dbxref=GeneID:1100648;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 32.90%2C E-value 7.3e-06;gbkey=misc_feature;gene=SC7E4.04c
NC_003888.3	RefSeq	gene	5668087	5668887	.	-	.	ID=gene5262;Dbxref=GeneID:1100649;Name=SC7E4.05c;gbkey=Gene;gene=SC7E4.05c;gene_biotype=protein_coding;gene_synonym=SC7E4.05c;locus_tag=SCO5208
NC_003888.3	RefSeq	CDS	5668087	5668887	.	-	0	ID=cds5160;Parent=gene5262;Dbxref=Genbank:NP_629355.1,GeneID:1100649;Name=NP_629355.1;Note=SC7E4.05c%2C probable monophosphatase%2C len: 266 aa%3B similar to SW:STRO_STRGR (EMBL:Y08763) Streptomyces griseus glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) StrO%2C 259 aa%3B fasta scores: opt: 316 z-score: 395.8 E(): 1.4e-14%3B 35.9%25 identity in 248 aa overlap. Contains 2x Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family and match to Prosite entry PS00629 Inositol monophosphatase family signature 1;gbkey=CDS;gene=SC7E4.05c;product=monophosphatase;protein_id=NP_629355.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5668183	5668290	.	-	.	ID=id6732;Dbxref=GeneID:1100649;Note=Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family%2C score 29.90%2C E-value 2.1e-07;gbkey=misc_feature;gene=SC7E4.05c
NC_003888.3	RefSeq	sequence_feature	5668474	5668692	.	-	.	ID=id6733;Dbxref=GeneID:1100649;Note=Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family%2C score 40.30%2C E-value 2.5e-10;gbkey=misc_feature;gene=SC7E4.05c
NC_003888.3	RefSeq	sequence_feature	5668606	5668647	.	-	.	ID=id6734;Dbxref=GeneID:1100649;Note=PS00629 Inositol monophosphatase family signature 1;gbkey=misc_feature;gene=SC7E4.05c
NC_003888.3	RefSeq	ribosome_entry_site	5669070	5669074	.	+	.	ID=id6735;gbkey=RBS
NC_003888.3	RefSeq	gene	5669080	5669691	.	+	.	ID=gene5263;Dbxref=GeneID:1100650;Name=SC7E4.06;gbkey=Gene;gene=SC7E4.06;gene_biotype=protein_coding;gene_synonym=SC7E4.06;locus_tag=SCO5209
NC_003888.3	RefSeq	CDS	5669080	5669691	.	+	0	ID=cds5161;Parent=gene5263;Dbxref=Genbank:NP_629356.1,GeneID:1100650;Name=NP_629356.1;Note=SC7E4.06%2C possible tetR-family transcriptional regulator%2C len: 203 aa%3B similar to TR:Q9Z551 (EMBL:AL035212) Streptomyces coelicolor transcriptional regulator SC9B2.08c%2C 192 aa%3B fasta scores: opt: 169 z-score: 206.9 E(): 0.00047%3B 31.9%25 identity in 182 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 24..45 (+3.85 SD);gbkey=CDS;gene=SC7E4.06;product=TetR family transcriptional regulator;protein_id=NP_629356.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5669101	5669241	.	+	.	ID=id6736;Dbxref=GeneID:1100650;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 49.40%2C E-value 3.7e-11;gbkey=misc_feature;gene=SC7E4.06
NC_003888.3	RefSeq	gene	5669723	5670046	.	-	.	ID=gene5264;Dbxref=GeneID:1100651;Name=SC7E4.07c;gbkey=Gene;gene=SC7E4.07c;gene_biotype=protein_coding;gene_synonym=SC7E4.07c;locus_tag=SCO5210
NC_003888.3	RefSeq	CDS	5669723	5670046	.	-	0	ID=cds5162;Parent=gene5264;Dbxref=Genbank:NP_629357.1,GeneID:1100651;Name=NP_629357.1;Note=SC7E4.07c%2C possible molecular chaperone%2C len: 107 aa%3B similar to SW:SUGE_ECOLI (EMBL:X69949) Escherichia coli SugE protein%2C 105 aa%3B fasta scores: opt: 341 z-score: 449.1 E(): 1.5e-17%3B 44.7%25 identity in 103 aa overlap and to TR:CAB88839 (EMBL:AL353832) Streptomyces coelicolor sugE%2C SCE6.35c%2C 106 aa%3B fasta scores: opt: 323 z-score: 386.5 E(): 6e-16%3B 43.0%25 identity in 107 aa overlap. Contains Pfam match to entry PF00893 DUF7%2C Integral membrane protein and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7E4.07c;product=molecular chaperone;protein_id=NP_629357.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5669768	5670046	.	-	.	ID=id6737;Dbxref=GeneID:1100651;Note=Pfam match to entry PF00893 DUF7%2C Integral membrane protein%2C score 93.60%2C E-value 3.9e-24;gbkey=misc_feature;gene=SC7E4.07c
NC_003888.3	RefSeq	ribosome_entry_site	5670053	5670058	.	-	.	ID=id6738;gbkey=RBS
NC_003888.3	RefSeq	gene	5670249	5671262	.	-	.	ID=gene5265;Dbxref=GeneID:1100652;Name=SC7E4.08c;gbkey=Gene;gene=SC7E4.08c;gene_biotype=protein_coding;gene_synonym=SC7E4.08c;locus_tag=SCO5211
NC_003888.3	RefSeq	CDS	5670249	5671262	.	-	0	ID=cds5163;Parent=gene5265;Dbxref=Genbank:NP_629358.1,GeneID:1100652;Name=NP_629358.1;Note=SC7E4.08c%2C conserved hypothetical protein%2C len: 337 aa%3B similar to TR:O05873 (EMBL:Z95121) Mycobacterium tuberculosis hypothetical 34.9 kD protein MTCY20B11.03%2C 330 aa%3B fasta scores: opt: 1051 z-score: 1176.2 E(): 0%3B 52.7%25 identity in 338 aa overlap. Contains match to Prosite entryPS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC7E4.08c;product=hypothetical protein;protein_id=NP_629358.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5670615	5670638	.	-	.	ID=id6739;Dbxref=GeneID:1100652;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7E4.08c
NC_003888.3	RefSeq	gene	5671275	5672591	.	-	.	ID=gene5266;Dbxref=GeneID:1100653;Name=aroA2;gbkey=Gene;gene=aroA2;gene_biotype=protein_coding;gene_synonym=aroA2,SC7E4.09c;locus_tag=SCO5212
NC_003888.3	RefSeq	CDS	5671275	5672591	.	-	0	ID=cds5164;Parent=gene5266;Dbxref=Genbank:NP_629359.1,GeneID:1100653;Name=NP_629359.1;Note=catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis;gbkey=CDS;gene=aroA2;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=NP_629359.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5671296	5672552	.	-	.	ID=id6740;Dbxref=GeneID:1100653;Note=Pfam match to entry PF00275 EPSP_syntase%2C EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)%2C score 399.20%2C E-value 3.9e-116;gbkey=misc_feature;gene=aroA2
NC_003888.3	RefSeq	gene	5672715	5673437	.	-	.	ID=gene5267;Dbxref=GeneID:1100654;Name=SC7E4.10c;gbkey=Gene;gene=SC7E4.10c;gene_biotype=protein_coding;gene_synonym=SC7E4.10c;locus_tag=SCO5213
NC_003888.3	RefSeq	CDS	5672715	5673437	.	-	0	ID=cds5165;Parent=gene5267;Dbxref=Genbank:NP_629360.1,GeneID:1100654;Name=NP_629360.1;Note=SC7E4.10c%2C possible integral membrane protein%2C len: 240 aa%3B similar to TR:CAB89063 (EMBL:AL353872) Streptomyces coelicolor  integral membrane protein SC5G8.12%2C 322 aa%3B fasta scores: opt: 126 z-score: 158.5 E(): 0.23%3B 25.6%25 identity in 160 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7E4.10c;product=hypothetical protein;protein_id=NP_629360.1;transl_table=11
NC_003888.3	RefSeq	gene	5673488	5674303	.	+	.	ID=gene5268;Dbxref=GeneID:1100655;Name=SC7E4.11;gbkey=Gene;gene=SC7E4.11;gene_biotype=protein_coding;gene_synonym=SC7E4.11;locus_tag=SCO5214
NC_003888.3	RefSeq	CDS	5673488	5674303	.	+	0	ID=cds5166;Parent=gene5268;Dbxref=Genbank:NP_629361.1,GeneID:1100655;Name=NP_629361.1;Note=SC7E4.11%2C hypothetical protein%2C len: 271 aa%3B similar to TR:O05872 (EMBL:Z95121) Mycobacterium tuberculosis hypothetical 27.6 kD protein MTCY20B11.01c%2C 252 aa%3B fasta scores: opt: 383 z-score: 460.8 E(): 3.4e-18%3B 39.6%25 identity in 283 aa overlap;gbkey=CDS;gene=SC7E4.11;product=hypothetical protein;protein_id=NP_629361.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5674262	5677169	.	+	.	ID=id6741;Note=previously sequenced DNA fragment. EMBL:SAJ010320 Streptomyces coelicolor sigR and rsrA genes;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5674320	5674323	.	+	.	ID=id6742;gbkey=RBS
NC_003888.3	RefSeq	gene	5674326	5674961	.	+	.	ID=gene5269;Dbxref=GeneID:1100656;Name=SC7E4.12;gbkey=Gene;gene=SC7E4.12;gene_biotype=protein_coding;gene_synonym=SC7E4.12;locus_tag=SCO5215
NC_003888.3	RefSeq	CDS	5674326	5674961	.	+	0	ID=cds5167;Parent=gene5269;Dbxref=Genbank:NP_629362.1,GeneID:1100656;Name=NP_629362.1;Note=SC7E4.12%2C hypothetical protein%2C len: 211 aa%3B similar to TR:P96267 (EMBL:Z84724) Mycobacterium tuberculosis hypothetical 21.7 kD protein MTCY22G10.18c%2C 209 aa%3B fasta scores: opt: 255 z-score: 287.1 E(): 1.6e-08%3B 29.8%25 identity in 205 aa overlap;gbkey=CDS;gene=SC7E4.12;product=hypothetical protein;protein_id=NP_629362.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5675212	5675217	.	+	.	ID=id6743;gbkey=RBS
NC_003888.3	RefSeq	gene	5675219	5675902	.	+	.	ID=gene5270;Dbxref=GeneID:1100657;Name=SC7E4.13;gbkey=Gene;gene=SC7E4.13;gene_biotype=protein_coding;gene_synonym=SC7E4.13,sigR;locus_tag=SCO5216
NC_003888.3	RefSeq	CDS	5675219	5675902	.	+	0	ID=cds5168;Parent=gene5270;Dbxref=Genbank:NP_629363.1,GeneID:1100657;Name=NP_629363.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;gene=SC7E4.13;product=RNA polymerase sigma factor RpoE;protein_id=NP_629363.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5675363	5675530	.	+	.	ID=id6744;Dbxref=GeneID:1100657;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 96.80%2C E-value 4.1e-25;gbkey=misc_feature;gene=SC7E4.13
NC_003888.3	RefSeq	sequence_feature	5675399	5675494	.	+	.	ID=id6745;Dbxref=GeneID:1100657;Note=PS01063 Sigma-70 factors ECF subfamily signature;gbkey=misc_feature;gene=SC7E4.13
NC_003888.3	RefSeq	gene	5675899	5676216	.	+	.	ID=gene5271;Dbxref=GeneID:1100658;Name=rsrA;gbkey=Gene;gene=rsrA;gene_biotype=protein_coding;gene_synonym=rsrA,SC7E4.14;locus_tag=SCO5217
NC_003888.3	RefSeq	CDS	5675899	5676216	.	+	0	ID=cds5169;Parent=gene5271;Dbxref=Genbank:NP_629364.1,GeneID:1100658;Name=NP_629364.1;Note=SC7E4.14%2C rsrA%2C anti-sigma factor%2C len: 105 aa%3B identical to previously sequenced TR:Q9RL96 (EMBL:AJ010320) Streptomyces coelicolor anti-sigma factor RsrA%2C 105 aa;gbkey=CDS;gene=rsrA;product=anti-sigma factor;protein_id=NP_629364.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5676335	5676339	.	+	.	ID=id6746;gbkey=RBS
NC_003888.3	RefSeq	gene	5676345	5677670	.	+	.	ID=gene5272;Dbxref=GeneID:1100659;Name=SC7E4.15;gbkey=Gene;gene=SC7E4.15;gene_biotype=protein_coding;gene_synonym=SC7E4.15;locus_tag=SCO5218
NC_003888.3	RefSeq	CDS	5676345	5677670	.	+	0	ID=cds5170;Parent=gene5272;Dbxref=Genbank:NP_629365.1,GeneID:1100659;Name=NP_629365.1;Note=SC7E4.15%2C possible integral membrane protein%2C len: 441 aa%3B similar to TR:Q9X1H8 (EMBL:AE001797) Thermotoga maritima conserved hypothetical protein TM1467%2C 426 aa%3B fasta scores: opt: 471 z-score: 536.1 E(): 2.2e-22%3B 29.0%25 identity in 352 aa overlap. Contains possible N-terminal signal peptide sequence and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7E4.15;product=hypothetical protein;protein_id=NP_629365.1;transl_table=11
NC_003888.3	RefSeq	gene	5677676	5678932	.	+	.	ID=gene5273;Dbxref=GeneID:1100660;Name=SC7E4.16;gbkey=Gene;gene=SC7E4.16;gene_biotype=protein_coding;gene_synonym=SC7E4.16;locus_tag=SCO5219
NC_003888.3	RefSeq	CDS	5677676	5678932	.	+	0	ID=cds5171;Parent=gene5273;Dbxref=Genbank:NP_629366.1,GeneID:1100660;Name=NP_629366.1;Note=SC7E4.16%2C possible lipoprotein%2C len: 418 aa. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site%2C possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7E4.16;product=lipoprotein;protein_id=NP_629366.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5677724	5677756	.	+	.	ID=id6747;Dbxref=GeneID:1100660;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC7E4.16
NC_003888.3	RefSeq	gene	5679047	5680027	.	+	.	ID=gene5274;Dbxref=GeneID:1100661;Name=SC7E4.17;gbkey=Gene;gene=SC7E4.17;gene_biotype=protein_coding;gene_synonym=SC7E4.17;locus_tag=SCO5220
NC_003888.3	RefSeq	CDS	5679047	5680027	.	+	0	ID=cds5172;Parent=gene5274;Dbxref=Genbank:NP_629367.1,GeneID:1100661;Name=NP_629367.1;Note=SC7E4.17%2C unknown%2C len: 326 aa;gbkey=CDS;gene=SC7E4.17;product=hypothetical protein;protein_id=NP_629367.1;transl_table=11
NC_003888.3	RefSeq	gene	5680107	5680757	.	+	.	ID=gene5275;Dbxref=GeneID:1100662;Name=SC7E4.18;gbkey=Gene;gene=SC7E4.18;gene_biotype=protein_coding;gene_synonym=SC7E4.18;locus_tag=SCO5221
NC_003888.3	RefSeq	CDS	5680107	5680757	.	+	0	ID=cds5173;Parent=gene5275;Dbxref=Genbank:NP_629368.1,GeneID:1100662;Name=NP_629368.1;Note=SC7E4.18%2C probable polypeptide deformylase%2C len: 216 aa%3B similar to SW:DEF_FREDI (EMBL:Y10305) Fremyella diplosiphon polypeptide deformylase (EC 3.5.1.31) Def%2C 187 aa%3B fasta scores: opt: 353 z-score: 430.0 E(): 1.8e-16%3B 33.8%25 identity in 145 aa overlap and to TR:Q9XAQ2 (EMBL:AL078618) Streptomyces coelicolor polypeptide deformylase SC10A7.23%2C 208 aa%3B fasta scores: opt: 680 z-score: 796.7 E(): 0%3B 59.8%25 identity in 169 aa overlap. Contains Pfam match to entry PF01327 Pep_deformylase%2C Polypeptide deformylase;gbkey=CDS;gene=SC7E4.18;product=polypeptide deformylase;protein_id=NP_629368.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5680233	5680667	.	+	.	ID=id6748;Dbxref=GeneID:1100662;Note=Pfam match to entry PF01327 Pep_deformylase%2C Polypeptide deformylase%2C score 183.80%2C E-value 2.7e-51;gbkey=misc_feature;gene=SC7E4.18
NC_003888.3	RefSeq	ribosome_entry_site	5681003	5681006	.	+	.	ID=id6749;gbkey=RBS
NC_003888.3	RefSeq	gene	5681016	5682101	.	+	.	ID=gene5276;Dbxref=GeneID:1100663;Name=SC7E4.19;gbkey=Gene;gene=SC7E4.19;gene_biotype=protein_coding;gene_synonym=SC7E4.19;locus_tag=SCO5222
NC_003888.3	RefSeq	CDS	5681016	5682101	.	+	0	ID=cds5174;Parent=gene5276;Dbxref=Genbank:NP_629369.1,GeneID:1100663;Name=NP_629369.1;Note=SC7E4.19%2C possible lyase%2C len: 361 aa%3B similar to SW:PTLS_STRSQ (EMBL:U05213) Streptomyces sp. pentalenene synthase (EC 4.6.1.5)%2C 336 aa%3B fasta scores: opt: 254 z-score: 317.5 E(): 3.3e-10%3B 23.8%25 identity in 311 aa overlap. Contains match to Prosite entry PS00904 Protein prenyltransferases alpha subunit repeat signature and a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC7E4.19;product=lyase;protein_id=NP_629369.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5681277	5681306	.	+	.	ID=id6750;Dbxref=GeneID:1100663;Note=PS00904 Protein prenyltransferases alpha subunit repeat signature;gbkey=misc_feature;gene=SC7E4.19
NC_003888.3	RefSeq	sequence_feature	5681898	5681900	.	+	.	ID=id6751;Dbxref=GeneID:1100663;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SC7E4.19
NC_003888.3	RefSeq	gene	5682098	5683483	.	+	.	ID=gene5277;Dbxref=GeneID:1100664;Name=SC7E4.20;gbkey=Gene;gene=SC7E4.20;gene_biotype=protein_coding;gene_synonym=SC7E4.20;locus_tag=SCO5223
NC_003888.3	RefSeq	CDS	5682098	5683483	.	+	0	ID=cds5175;Parent=gene5277;Dbxref=Genbank:NP_629370.1,GeneID:1100664;Name=NP_629370.1;Note=SC7E4.20%2C probable cytochrome P450%2C len: 461 aa%3B similar to SW:CP51_HUMAN (EMBL:U23942) Homo sapiens cytochrome P450 51 (EC 1.14.14.1) Cyp51%2C 503 aa%3B fasta scores: opt: 532 z-score: 587.2 E(): 3.1e-25%3B 25.7%25 identity in 447 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450;gbkey=CDS;gene=SC7E4.20;product=cytochrome P450;protein_id=NP_629370.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5682167	5683378	.	+	.	ID=id6752;Dbxref=GeneID:1100664;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 221.80%2C E-value 1e-62;gbkey=misc_feature;gene=SC7E4.20
NC_003888.3	RefSeq	gene	5683497	5684465	.	-	.	ID=gene5278;Dbxref=GeneID:1100665;Name=SC7E4.21c;gbkey=Gene;gene=SC7E4.21c;gene_biotype=protein_coding;gene_synonym=SC7E4.21c;locus_tag=SCO5224
NC_003888.3	RefSeq	CDS	5683497	5684465	.	-	0	ID=cds5176;Parent=gene5278;Dbxref=Genbank:NP_629371.1,GeneID:1100665;Name=NP_629371.1;Note=SC7E4.21c%2C probable araC-family transcriptional regulator%2C len: 322 aa%3B similar to TR:Q9S166 (EMBL:AB023785) Streptomyces griseus transcriptional activator for strR%2C AdpA%2C 405 aa%3B fasta scores: opt: 1005 z-score: 1177.5 E(): 0%3B 49.2%25 identity in 325 aa overlapand to TR:CAB87229 (EMBL:AL163641) Streptomyces coelicolor araC-family transcriptional regulator AdpA%2C 398 aa%3B fasta scores: opt: 990 z-score: 1160.1 E(): 0%3B 48.9%25 identity in 313 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and match to Prosite entry PS00041 Bacterial regulatory proteins%2C araC family signature. Contains also a possible helix-turn-helix motif at residues 230..251 (+3.72 SD);gbkey=CDS;gene=SC7E4.21c;product=AraC family transcription regulator;protein_id=NP_629371.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5683521	5683781	.	-	.	ID=id6753;Dbxref=GeneID:1100665;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 79.70%2C E-value 6e-20;gbkey=misc_feature;gene=SC7E4.21c
NC_003888.3	RefSeq	sequence_feature	5683542	5683670	.	-	.	ID=id6754;Dbxref=GeneID:1100665;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SC7E4.21c
NC_003888.3	RefSeq	sequence_feature	5684507	5688493	.	-	.	ID=id6755;Note=previously sequenced DNA fragment. EMBL:AJ276618 Streptomyces coelicolor A3(2) nrdX gene%2C nrdL gene and nrdM gene;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5684737	5685768	.	-	.	ID=gene5279;Dbxref=GeneID:1100666;Name=nrdM;gbkey=Gene;gene=nrdM;gene_biotype=protein_coding;gene_synonym=nrdM,SC7E4.22c;locus_tag=SCO5225
NC_003888.3	RefSeq	CDS	5684737	5685768	.	-	0	ID=cds5177;Parent=gene5279;Dbxref=Genbank:NP_629372.1,GeneID:1100666;Name=NP_629372.1;Note=SC7E4.22c%2C nrdM%2C ribonucleotide-diphosphate reductase small chain%2C len: 343 aa%3B identical to previously sequenced TR:CAB82486 (EMBL:AJ276618) Streptomyces coelicolor A3(2) ribonucleotide-diphosphate reductase small chain (EC 1.17.4.1) NrdM%2C 343 aa. Contains Pfam match to entry PF00268 ribonuc_red%2C Ribonucleotide reductases and a possible hydrophobic membrane spanning region;gbkey=CDS;gene=nrdM;product=ribonucleotide-diphosphate reductase small chain;protein_id=NP_629372.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5684782	5685642	.	-	.	ID=id6756;Dbxref=GeneID:1100666;Note=Pfam match to entry PF00268 ribonuc_red%2C Ribonucleotide reductases%2C score 222.30%2C E-value 1e-75;gbkey=misc_feature;gene=nrdM
NC_003888.3	RefSeq	gene	5685768	5688143	.	-	.	ID=gene5280;Dbxref=GeneID:1100667;Name=nrdL;gbkey=Gene;gene=nrdL;gene_biotype=protein_coding;gene_synonym=nrdL,SC7E4.23c;locus_tag=SCO5226
NC_003888.3	RefSeq	CDS	5685768	5688143	.	-	0	ID=cds5178;Parent=gene5280;Dbxref=Genbank:NP_629373.1,GeneID:1100667;Name=NP_629373.1;Note=SC7E4.23c%2C nrdL%2C ribonucleotide-diphosphate reductase large chain%2C len: 791 aa%3B identical to previously sequenced TR:CAB82485 (EMBL:AJ276618) Streptomyces coelicolor A3(2) ribonucleotide-diphosphate reductase large chain (EC 1.17.4.1) NrdL%2C 791 aa. Contains Pfam match to entry PF00317 ribonucleo_red%2C Ribonucleotide reductase and match to Prosite entry PS00089 Ribonucleotide reductase large subunit signature;gbkey=CDS;gene=nrdL;product=ribonucleotide-diphosphate reductase large chain;protein_id=NP_629373.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5685779	5685782	.	-	.	ID=id6757;Dbxref=GeneID:1100667;gbkey=RBS;gene=nrdL
NC_003888.3	RefSeq	sequence_feature	5685903	5687741	.	-	.	ID=id6758;Dbxref=GeneID:1100667;Note=Pfam match to entry PF00317 ribonucleo_red%2C Ribonucleotide reductase%2C score 723.60%2C E-value 7.5e-271;gbkey=misc_feature;gene=nrdL
NC_003888.3	RefSeq	sequence_feature	5686305	5686373	.	-	.	ID=id6759;Dbxref=GeneID:1100667;Note=PS00089 Ribonucleotide reductase large subunit signature;gbkey=misc_feature;gene=nrdL
NC_003888.3	RefSeq	gene	5688140	5688415	.	-	.	ID=gene5281;Dbxref=GeneID:1100668;Name=nrdX;gbkey=Gene;gene=nrdX;gene_biotype=protein_coding;gene_synonym=nrdX,SC7E4.24c;locus_tag=SCO5227
NC_003888.3	RefSeq	CDS	5688140	5688415	.	-	0	ID=cds5179;Parent=gene5281;Dbxref=Genbank:NP_629374.1,GeneID:1100668;Name=NP_629374.1;Note=SC7E4.24c%2C nrdX%2C redoxin%2C len: 91 aa%3B identical to previously sequenced TR:CAB82484 (EMBL:AJ276618) Streptomyces coelicolor A3(2) redoxin NrdX%2C 91 aa. Doubtful CDS: Frameplot and Correlation Scores indicate that this CDS might not be a gene;gbkey=CDS;gene=nrdX;product=redoxin;protein_id=NP_629374.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5688152	5688155	.	-	.	ID=id6760;Dbxref=GeneID:1100668;gbkey=RBS;gene=nrdX
NC_003888.3	RefSeq	gene	5688494	5689000	.	-	.	ID=gene5282;Dbxref=GeneID:1100669;Name=SC7E4.25c;gbkey=Gene;gene=SC7E4.25c;gene_biotype=protein_coding;gene_synonym=SC7E4.25c;locus_tag=SCO5228
NC_003888.3	RefSeq	CDS	5688494	5689000	.	-	0	ID=cds5180;Parent=gene5282;Dbxref=Genbank:NP_629375.1,GeneID:1100669;Name=NP_629375.1;Note=SC7E4.25c%2C possible acetyltransferase%2C len: 168 aa%3B similar to TR:Q9S2P7 (EMBL:AL096872) Streptomyces coelicolor  acetyltransferase SC5F7.12c%2C 169 aa%3B fasta scores: opt: 151 z-score: 187.3 E(): 0.0058%3B 36.2%25 identity in 141 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC7E4.25c;product=acetyltransferase;protein_id=NP_629375.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5688572	5688988	.	-	.	ID=id6761;Dbxref=GeneID:1100669;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 67.20%2C E-value 3.4e-16;gbkey=misc_feature;gene=SC7E4.25c
NC_003888.3	RefSeq	gene	5689073	5690671	.	-	.	ID=gene5283;Dbxref=GeneID:1100670;Name=SC7E4.26c;gbkey=Gene;gene=SC7E4.26c;gene_biotype=protein_coding;gene_synonym=SC7E4.26c;locus_tag=SCO5229
NC_003888.3	RefSeq	CDS	5689073	5690671	.	-	0	ID=cds5181;Parent=gene5283;Dbxref=Genbank:NP_629376.1,GeneID:1100670;Name=NP_629376.1;Note=SC7E4.26c%2C probable permease%2C len: 4532 aa%3B similar to TR:Q47552 (EMBL:L01152) Escherichia coli proline permease (fragment) PutP%2C 489 aa%3B fasta scores: opt: 333 z-score: 378.7 E(): 1.3e-13%3B 23.8%25 identity in 495 aa overlap. Contains Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7E4.26c;product=permease;protein_id=NP_629376.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5689355	5690554	.	-	.	ID=id6762;Dbxref=GeneID:1100670;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score -80.90%2C E-value 5.6e-05;gbkey=misc_feature;gene=SC7E4.26c
NC_003888.3	RefSeq	gene	5690680	5690964	.	-	.	ID=gene5284;Dbxref=GeneID:1100671;Name=SC7E4.27c;gbkey=Gene;gene=SC7E4.27c;gene_biotype=protein_coding;gene_synonym=SC7E4.27c;locus_tag=SCO5230
NC_003888.3	RefSeq	CDS	5690680	5690964	.	-	0	ID=cds5182;Parent=gene5284;Dbxref=Genbank:NP_629377.1,GeneID:1100671;Name=NP_629377.1;Note=SC7E4.27c%2C possible integral membrane protein%2C len: 94 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7E4.27c;product=hypothetical protein;protein_id=NP_629377.1;transl_table=11
NC_003888.3	RefSeq	gene	5691072	5691836	.	-	.	ID=gene5285;Dbxref=GeneID:1100672;Name=SC7E4.28c;gbkey=Gene;gene=SC7E4.28c;gene_biotype=protein_coding;gene_synonym=SC7E4.28c;locus_tag=SCO5231
NC_003888.3	RefSeq	CDS	5691072	5691836	.	-	0	ID=cds5183;Parent=gene5285;Dbxref=Genbank:NP_629378.1,GeneID:1100672;Name=NP_629378.1;Note=SC7E4.28c%2C probable gntR-family transcriptional regulator%2C len: 254 aa%3B similar to SW:HUTC_PSEPU (EMBL:M33922) Pseudomonas putida histidine utilization repressor HutC%2C 248 aa%3B fasta scores: opt: 355 z-score: 415.1 E(): 1.2e-15%3B 31.6%25 identity in 234 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and match to Prosite entry PS00043 Bacterial regulatory proteins%2C gntR family signature. Contains also a possible helix-turn-helix motif at residues 45..66 (+3.08 SD);gbkey=CDS;gene=SC7E4.28c;product=GntR family transcriptional regulator;protein_id=NP_629378.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5691585	5691722	.	-	.	ID=id6763;Dbxref=GeneID:1100672;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 65.80%2C E-value 8.7e-19;gbkey=misc_feature;gene=SC7E4.28c
NC_003888.3	RefSeq	sequence_feature	5691633	5691707	.	-	.	ID=id6764;Dbxref=GeneID:1100672;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SC7E4.28c
NC_003888.3	RefSeq	ribosome_entry_site	5692280	5692285	.	+	.	ID=id6765;gbkey=RBS
NC_003888.3	RefSeq	gene	5692292	5693569	.	+	.	ID=gene5286;Dbxref=GeneID:1100673;Name=SC7E4.29;gbkey=Gene;gene=SC7E4.29;gene_biotype=protein_coding;gene_synonym=SC7E4.29;locus_tag=SCO5232
NC_003888.3	RefSeq	CDS	5692292	5693569	.	+	0	ID=cds5184;Parent=gene5286;Dbxref=Genbank:NP_629379.1,GeneID:1100673;Name=NP_629379.1;Note=SC7E4.29%2C possible sugar transporter sugar binding protein%2C len: 425 aa%3B similar to TR:Q9RK79 (EMBL:AL132662) Streptomyces coelicolor sugar transporter sugar binding protein SCF11.11%2C 422 aa%3B fasta scores: opt: 917 z-score: 991.5 E(): 0%3B 37.9%25 identity in 417 aa overlap and to SW:MALX_STRPN (EMBL:L08611) Streptococcus pneumoniae maltose/maltodextrin-binding protein precursor MalX%2C 423 aa%3B fasta scores: opt: 312 z-score: 340.7 E(): 1.7e-11%3B 22.9%25 identity in 428 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7E4.29;product=sugar transporter sugar binding protein;protein_id=NP_629379.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5692322	5692354	.	+	.	ID=id6766;Dbxref=GeneID:1100673;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC7E4.29
NC_003888.3	RefSeq	sequence_feature	5692706	5693338	.	+	.	ID=id6767;Dbxref=GeneID:1100673;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 77.40%2C E-value 1e-20;gbkey=misc_feature;gene=SC7E4.29
NC_003888.3	RefSeq	gene	5693658	5694644	.	+	.	ID=gene5287;Dbxref=GeneID:1100674;Name=SC7E4.30;gbkey=Gene;gene=SC7E4.30;gene_biotype=protein_coding;gene_synonym=SC7E4.30;locus_tag=SCO5233
NC_003888.3	RefSeq	CDS	5693658	5694644	.	+	0	ID=cds5185;Parent=gene5287;Dbxref=Genbank:NP_629380.1,GeneID:1100674;Name=NP_629380.1;Note=SC7E4.30%2C possible sugar transporter integral membrane protein%2C len: 328 aa%3B similar to TR:Q9RK78 (EMBL:AL132662) Streptomyces coelicolor sugar transporter integral membrane protein SCF11.12%2C 302 aa%3B fasta scores: opt: 907 z-score: 1004.1 E(): 0%3B 46.6%25 identity in 298 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7E4.30;product=sugar transporter integral membrane protein;protein_id=NP_629380.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5694294	5694521	.	+	.	ID=id6768;Dbxref=GeneID:1100674;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 47.70%2C E-value 2.5e-10;gbkey=misc_feature;gene=SC7E4.30
NC_003888.3	RefSeq	ribosome_entry_site	5694628	5694633	.	+	.	ID=id6769;Dbxref=GeneID:1100674;gbkey=RBS;gene=SC7E4.30
NC_003888.3	RefSeq	gene	5694641	5695471	.	+	.	ID=gene5288;Dbxref=GeneID:1100675;Name=SC7E4.31;gbkey=Gene;gene=SC7E4.31;gene_biotype=protein_coding;gene_synonym=SC7E4.31;locus_tag=SCO5234
NC_003888.3	RefSeq	CDS	5694641	5695471	.	+	0	ID=cds5186;Parent=gene5288;Dbxref=Genbank:NP_629381.1,GeneID:1100675;Name=NP_629381.1;Note=SC7E4.31%2C possible sugar transporter integral membrane protein%2C len: 276 aa%3B similar to TR:Q9RK77 (EMBL:AL132662%3B) Streptomyces coelicolor sugar transporter integral membrane protein SCF11.13%2C 285 aa%3B fasta scores: opt: 1027 z-score: 1227.9 E(): 0%3B 54.3%25 identity in 278 aa overlap and to TR:Q9R9Q5 (EMBL:AF175299) Rhizobium meliloti inner membrane permease ThuG%2C 276 aa%3B fasta scores: opt: 554 z-score: 666.6 E(): 1.2e-29%3B 33.8%25 identity in 266 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7E4.31;product=sugar transporter integral membrane protein;protein_id=NP_629381.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5695118	5695342	.	+	.	ID=id6770;Dbxref=GeneID:1100675;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 60.30%2C E-value 4.3e-14;gbkey=misc_feature;gene=SC7E4.31
NC_003888.3	RefSeq	sequence_feature	5695121	5695207	.	+	.	ID=id6771;Dbxref=GeneID:1100675;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC7E4.31
NC_003888.3	RefSeq	gene	5695480	5696970	.	+	.	ID=gene5289;Dbxref=GeneID:1100676;Name=SC7E4.32;gbkey=Gene;gene=SC7E4.32;gene_biotype=protein_coding;gene_synonym=SC7E4.32;locus_tag=SCO5235
NC_003888.3	RefSeq	CDS	5695480	5696970	.	+	0	ID=cds5187;Parent=gene5289;Dbxref=Genbank:NP_629382.1,GeneID:1100676;Name=NP_629382.1;Note=SC7E4.32%2C possible sugar hydrolase%2C len: 496 aa%3B similar to SW:HEXA_ALTSO (EMBL:D17399) Alteromonas sp. beta-hexosaminidase A precursor (EC 3.2.1.52) Cht60%2C 598 aa%3B fasta scores: opt: 486 z-score: 525.0 E(): 9e-22%3B 34.4%25 identity in 363 aa overlap and to TR O69862 (EMBL:AL023702%3B) Streptomyces coelicolor hydrolase SC1C3.20c%2C 506 aa%3B fasta scores: opt: 1849 z-score: 1988.9 E(): 0%3B 60.6%25 identity in 498 aa overlap. Contains Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain;gbkey=CDS;gene=SC7E4.32;product=sugar hydrolase;protein_id=NP_629382.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5695549	5696421	.	+	.	ID=id6772;Dbxref=GeneID:1100676;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain%2C score 194.60%2C E-value 1.5e-54;gbkey=misc_feature;gene=SC7E4.32
NC_003888.3	RefSeq	gene	5697291	5698076	.	-	.	ID=gene5290;Dbxref=GeneID:1100677;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;gene_synonym=SC7E4.33c;locus_tag=SCO5236
NC_003888.3	RefSeq	CDS	5697291	5698076	.	-	0	ID=cds5188;Parent=gene5290;Dbxref=Genbank:NP_629383.1,GeneID:1100677;Name=NP_629383.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=NP_629383.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5697369	5698019	.	-	.	ID=id6773;Dbxref=GeneID:1100677;Note=Pfam match to entry PF01182 Glucosamine_iso%2C Glucosamine-6-phosphate isomerase%2C score 273.60%2C E-value 2.5e-78;gbkey=misc_feature;gene=nagB
NC_003888.3	RefSeq	gene	5698211	5698963	.	-	.	ID=gene5291;Dbxref=GeneID:1100678;Name=SC7E4.34c;gbkey=Gene;gene=SC7E4.34c;gene_biotype=protein_coding;gene_synonym=SC7E4.34c;locus_tag=SCO5237
NC_003888.3	RefSeq	CDS	5698211	5698963	.	-	0	ID=cds5189;Parent=gene5291;Dbxref=Genbank:NP_629384.1,GeneID:1100678;Name=NP_629384.1;Note=SC7E4.34c%2C probable oxidoreductase%2C len: 250 aa%3B highly similar to TR:Q9RKS8 (EMBL:AL132824) Streptomyces coelicolor reductase SCAH10.29%2C 262 aa%3B fasta scores: opt: 807 z-score: 863.1 E(): 0%3B 52.4%25 identity in 252 aa overlap and to SW:VER1_ASPPA (EMBL:M91369) Aspergillus parasiticus versicolorin reductase (EC 1.1.-.-) Ver1%2C 262 aa%3B fasta scores: opt: 469 z-score: 506.7 E(): 9.4e-21%3B 39.2%25 identity in 255 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus;gbkey=CDS;gene=SC7E4.34c;product=oxidoreductase;protein_id=NP_629384.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5698232	5698324	.	-	.	ID=id6774;Dbxref=GeneID:1100678;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 23.40%2C E-value 6.7e-05;gbkey=misc_feature;gene=SC7E4.34c
NC_003888.3	RefSeq	sequence_feature	5698391	5698945	.	-	.	ID=id6775;Dbxref=GeneID:1100678;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 183.60%2C E-value 3.2e-51;gbkey=misc_feature;gene=SC7E4.34c
NC_003888.3	RefSeq	gene	5699058	5699702	.	+	.	ID=gene5292;Dbxref=GeneID:1100679;Name=SC7E4.35;gbkey=Gene;gene=SC7E4.35;gene_biotype=protein_coding;gene_synonym=SC7E4.35;locus_tag=SCO5238
NC_003888.3	RefSeq	CDS	5699058	5699702	.	+	0	ID=cds5190;Parent=gene5292;Dbxref=Genbank:NP_629385.1,GeneID:1100679;Name=NP_629385.1;Note=SC7E4.35%2C possible TetR family transcriptional regulator%2C len: 214 aa%3B similar to TR:CAB69777 (EMBL:AL137187) Streptomyces coelicolor  tetR-family transcriptional regulator SC7A8.28%2C 194 aa%3B fasta scores: opt: 326 z-score: 399.8 E(): 8.5e-15%3B 34.9%25 identity in 192 aa overlap and to TR:CAB93063 (EMBL:AL357432) Streptomyces coelicolor transcriptional regulator SCD95A.36c%2C 202 aa%3B fasta scores: opt: 458 z-score: 451.3 E(): 1.5e-19%3B 41.8%25 identity in 194 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SC7E4.35;product=TetR family transcriptional regulator;protein_id=NP_629385.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5699154	5699294	.	+	.	ID=id6776;Dbxref=GeneID:1100679;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.40%2C E-value 4.2e-10;gbkey=misc_feature;gene=SC7E4.35
NC_003888.3	RefSeq	gene	5700131	5701606	.	+	.	ID=gene5293;Dbxref=GeneID:1100680;Name=2SC7G11.01;gbkey=Gene;gene=2SC7G11.01;gene_biotype=protein_coding;gene_synonym=2SC7G11.01,SC7E4.36;locus_tag=SCO5239
NC_003888.3	RefSeq	CDS	5700131	5701606	.	+	0	ID=cds5191;Parent=gene5293;Dbxref=Genbank:NP_733658.1,GeneID:1100680;Name=NP_733658.1;Note=2SC7G11.01%2C possible histidine kinase%2C len: 491 aa%3B similar to TR:O05846 (EMBL:Z95120) Mycobacterium tuberculosis hypothetical 54.0 kDa protein MTCY07D11.06%2C 501 aa%3B fasta scores: opt: 1038 z-score: 1176.8 E(): 0%3B 48.9%25 identity in 380 aa overlap and to TR:O26226 (EMBL:AE000801) Methanobacterium thermoautotrophicum sensory transduction histidine kinase MTH123%2C 356 aa%3B fasta scores: opt: 372 z-score: 426.7 E(): 2.7e-16%3B 29.9%25 identity in 321 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase;gbkey=CDS;gene=2SC7G11.01;product=histidine kinase;protein_id=NP_733658.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5700486	5702728	.	-	.	ID=id6777;Note=previously sequenced DNA fragment. EMBL:AJ239087 Streptomyces coelicolor wblE gene for hypothetical protein;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5701016	5701588	.	+	.	ID=id6778;Dbxref=GeneID:1100680;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score -24.70%2C E-value 0.001;gbkey=misc_feature;gene=2SC7G11.01
NC_003888.3	RefSeq	gene	5701855	5702112	.	-	.	ID=gene5294;Dbxref=GeneID:1100681;Name=2SC7G11.02c;gbkey=Gene;gene=2SC7G11.02c;gene_biotype=protein_coding;gene_synonym=2SC7G11.02c,wblE;locus_tag=SCO5240
NC_003888.3	RefSeq	CDS	5701855	5702112	.	-	0	ID=cds5192;Parent=gene5294;Dbxref=Genbank:NP_629386.1,GeneID:1100681;Name=NP_629386.1;Note=2SC7G11.02c%2C wblE%2C hypothetical protein%2C len: 85 aa%3B identical to previously sequenced TR:Q9X952 (EMBL:AJ239087) Streptomyces coelicolor hypothetical 9.7 kDa protein WblE%2C 85 aa;gbkey=CDS;gene=2SC7G11.02c;product=hypothetical protein;protein_id=NP_629386.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5702118	5702124	.	-	.	ID=id6779;gbkey=RBS
NC_003888.3	RefSeq	gene	5702433	5703401	.	-	.	ID=gene5295;Dbxref=GeneID:1100682;Name=2SC7G11.03c;gbkey=Gene;gene=2SC7G11.03c;gene_biotype=protein_coding;gene_synonym=2SC7G11.03c;locus_tag=SCO5241
NC_003888.3	RefSeq	CDS	5702433	5703401	.	-	0	ID=cds5193;Parent=gene5295;Dbxref=Genbank:NP_629387.1,GeneID:1100682;Name=NP_629387.1;Note=2SC7G11.03c%2C hypothetical protein%2C len: 322 aa%3B similar to TR:O05848 (EMBL:Z95120) Mycobacterium tuberculosis hypothetical 34.5 kDa protein MTCY07D11.08c%2C 321 aa%3B fasta scores: opt: 694 z-score: 788.3 E(): 0%3B 39.9%25 identity in 328 aa overlap. Contains Pfam match to entry PF00781 DAGKc%2C Diacylglycerol kinase catalytic domain (presumed);gbkey=CDS;gene=2SC7G11.03c;product=hypothetical protein;protein_id=NP_629387.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5703003	5703398	.	-	.	ID=id6780;Dbxref=GeneID:1100682;Note=Pfam match to entry PF00781 DAGKc%2C Diacylglycerol kinase catalytic domain (presumed)%2C score 47.80%2C E-value 2.3e-10;gbkey=misc_feature;gene=2SC7G11.03c
NC_003888.3	RefSeq	sequence_feature	5703411	5706710	.	-	.	ID=id6781;Note=previously sequenced DNA fragment. EMBL:AF162936 Streptomyces coelicolor A3(2) Na/H antiporter homolog gene%2C partial cds%3B and hypothetical protein (ushY)%2C sigma factor SigH anti-sigma factor (ushX)%2C and RNA polymerase alternative sigma factor (sigH) genes%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5703529	5703987	.	+	.	ID=gene5296;Dbxref=GeneID:1100683;Name=2SC7G11.04;gbkey=Gene;gene=2SC7G11.04;gene_biotype=protein_coding;gene_synonym=2SC7G11.04;locus_tag=SCO5242
NC_003888.3	RefSeq	CDS	5703529	5703987	.	+	0	ID=cds5194;Parent=gene5296;Dbxref=Genbank:NP_629388.1,GeneID:1100683;Name=NP_629388.1;Note=2SC7G11.04%2C possible integral membrane protein%2C len: 152 aa%3B similar to TR:O05849 (EMBL:Z95120) Mycobacterium tuberculosis hypothetical 14.3 kDa protein MTCY07D11.09%2C 143 aa%3B fasta scores: opt: 177 z-score: 215.5 E(): 0.00015%3B 33.8%25 identity in 136 aa overlap;gbkey=CDS;gene=2SC7G11.04;product=hypothetical protein;protein_id=NP_629388.1;transl_table=11
NC_003888.3	RefSeq	gene	5704007	5705092	.	-	.	ID=gene5297;Dbxref=GeneID:1100684;Name=2SC7G11.05c;gbkey=Gene;gene=2SC7G11.05c;gene_biotype=protein_coding;gene_synonym=2SC7G11.05c,sig1;locus_tag=SCO5243
NC_003888.3	RefSeq	CDS	5704007	5705092	.	-	0	ID=cds5195;Parent=gene5297;Dbxref=Genbank:NP_629389.1,GeneID:1100684;Name=NP_629389.1;Note=2SC7G11.05c%2C sig1%2C RNA polymerase sigma factor%2C len: 361 aa%3B identical to previously sequenced TR:Q9RIT0 (EMBL:AJ249450) Streptomyces coelicolor A3(2) Sig1 protein%2C 361 aa and similar TR:CAB93744 (EMBL:AL357613) Streptomyces coelicolor regulatory protein SC5F8.16c%2C 83 aa%3B fasta scores: opt: 414 z-score: 534.4 E(): 3.9e-24%3B 72.0%25 identity in 82 aa overlap. Contains Pfam match to entry PF00140 sigma70%2C Sigma-70 factor and possible helix-turn-helix motif at residues 326..347 (+7.10 SD);gbkey=CDS;gene=2SC7G11.05c;product=RNA polymerase sigma factor;protein_id=NP_629389.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5704028	5704690	.	-	.	ID=id6782;Dbxref=GeneID:1100684;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 266.90%2C E-value 2.7e-76;gbkey=misc_feature;gene=2SC7G11.05c
NC_003888.3	RefSeq	gene	5705089	5705502	.	-	.	ID=gene5298;Dbxref=GeneID:1100685;Name=2SC7G11.06c;gbkey=Gene;gene=2SC7G11.06c;gene_biotype=protein_coding;gene_synonym=2SC7G11.06c,prs;locus_tag=SCO5244
NC_003888.3	RefSeq	CDS	5705089	5705502	.	-	0	ID=cds5196;Parent=gene5298;Dbxref=Genbank:NP_629390.1,GeneID:1100685;Name=NP_629390.1;Note=2SC7G11.06c%2C prs1%2C anti-sigma factor%2C len: 137 aa%3B identical to previously sequenced TR:Q9R3X8 (EMBL:AJ249450) Streptomyces coelicolor A3(2) regulator of Sig1%2C Prs1 protein or UshX%2C 137 aa;gbkey=CDS;gene=2SC7G11.06c;product=anti-sigma factor;protein_id=NP_629390.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5705505	5705512	.	-	.	ID=id6783;gbkey=RBS
NC_003888.3	RefSeq	gene	5705753	5706013	.	-	.	ID=gene5299;Dbxref=GeneID:1100686;Name=2SC7G11.07c;gbkey=Gene;gene=2SC7G11.07c;gene_biotype=protein_coding;gene_synonym=2SC7G11.07c;locus_tag=SCO5245
NC_003888.3	RefSeq	CDS	5705753	5706013	.	-	0	ID=cds5197;Parent=gene5299;Dbxref=Genbank:NP_629391.1,GeneID:1100686;Name=NP_629391.1;Note=2SC7G11.07c%2C hypothetical protein%2C len: 86 aa%3B identical to previously sequenced TR:Q9R3I9 (EMBL:AJ249450) Streptomyces coelicolor A3(2) hypothetical 9.6 kDa protein UshY%2C 86 aa. Contains Pfam match to entry PF02148 zf-UBP%2C Zn-finger in ubiquitin-hydrolases and other proteins;gbkey=CDS;gene=2SC7G11.07c;product=hypothetical protein;protein_id=NP_629391.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5705774	5705941	.	-	.	ID=id6784;Dbxref=GeneID:1100686;Note=Pfam match to entry PF02148 zf-UBP%2C Zn-finger in ubiquitin-hydrolases and other proteins%2C score 28.50%2C E-value 1.4e-06;gbkey=misc_feature;gene=2SC7G11.07c
NC_003888.3	RefSeq	ribosome_entry_site	5706068	5706071	.	+	.	ID=id6785;gbkey=RBS
NC_003888.3	RefSeq	gene	5706075	5707667	.	+	.	ID=gene5300;Dbxref=GeneID:1100687;Name=2SC7G11.08;gbkey=Gene;gene=2SC7G11.08;gene_biotype=protein_coding;gene_synonym=2SC7G11.08;locus_tag=SCO5246
NC_003888.3	RefSeq	CDS	5706075	5707667	.	+	0	ID=cds5198;Parent=gene5300;Dbxref=Genbank:NP_629392.1,GeneID:1100687;Name=NP_629392.1;Note=2SC7G11.08%2C possible Na+/H+ antiporter%2C len: 530 aa%3B identical to C-terminal region of previously sequenced TR:Q9RPC9 (EMBL:AF162936) Streptomyces coelicolor A3(2) Na/H antiporter homolog (fragment)%2C 212 aa and similar to SW:YJCE_ECOLI: (EMBL:U00006) Escherichia coli Na(+)/H(+) exchanger YjcE%2C 549 aa%3B fasta scores: opt: 516 z-score: 557.0 E(): 1.5e-23%3B 30.1%25 identity in 552 aa overlap. Contains Pfam match to entry PF00999 Na_H_Exchanger%2C Sodium/hydrogen exchanger family and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC7G11.08;product=Na+/H+ antiporter;protein_id=NP_629392.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5706084	5707298	.	+	.	ID=id6786;Dbxref=GeneID:1100687;Note=Pfam match to entry PF00999 Na_H_Exchanger%2C Sodium/hydrogen exchanger family%2C score 230.10%2C E-value 3.2e-65;gbkey=misc_feature;gene=2SC7G11.08
NC_003888.3	RefSeq	gene	5707716	5708624	.	-	.	ID=gene5301;Dbxref=GeneID:1100688;Name=2SC7G11.09c;gbkey=Gene;gene=2SC7G11.09c;gene_biotype=protein_coding;gene_synonym=2SC7G11.09c;locus_tag=SCO5247
NC_003888.3	RefSeq	CDS	5707716	5708624	.	-	0	ID=cds5199;Parent=gene5301;Dbxref=Genbank:NP_629393.1,GeneID:1100688;Name=NP_629393.1;Note=2SC7G11.09c%2C possible deaminase%2C len: 302 aa%3B similar to SW:1A1D_PYRHO (EMBL:AP000001) Pyrococcus horikoshii  1-aminocyclopropane-1-carboxylate deaminase (EC 4.1.99.4) PHBE027%2C 325 aa%3B fasta scores: opt: 274 z-score: 309.9 E(): 8.6e-10%3B 29.7%25 identity in 283 aa overlap;gbkey=CDS;gene=2SC7G11.09c;product=deaminase;protein_id=NP_629393.1;transl_table=11
NC_003888.3	RefSeq	gene	5708738	5709316	.	-	.	ID=gene5302;Dbxref=GeneID:1100689;Name=2SC7G11.10c;gbkey=Gene;gene=2SC7G11.10c;gene_biotype=protein_coding;gene_synonym=2SC7G11.10c;locus_tag=SCO5248
NC_003888.3	RefSeq	CDS	5708738	5709316	.	-	0	ID=cds5200;Parent=gene5302;Dbxref=Genbank:NP_629394.1,GeneID:1100689;Name=NP_629394.1;Note=2SC7G11.10c%2C hypothetical protein%2C len: 192 aa%3B similar to TR:O06288 (EMBL:Z95557) Mycobacterium tuberculosis hypothetical 30.6 kDa protein MTCY07H7.28c%2C 275 aa%3B fasta scores: opt: 180 z-score: 221.9 E(): 6.8e-05%3B 31.8%25 identity in 176 aa overlap;gbkey=CDS;gene=2SC7G11.10c;product=hypothetical protein;protein_id=NP_629394.1;transl_table=11
NC_003888.3	RefSeq	gene	5709624	5711030	.	+	.	ID=gene5303;Dbxref=GeneID:1100690;Name=2SC7G11.11;gbkey=Gene;gene=2SC7G11.11;gene_biotype=protein_coding;gene_synonym=2SC7G11.11;locus_tag=SCO5249
NC_003888.3	RefSeq	CDS	5709624	5711030	.	+	0	ID=cds5201;Parent=gene5303;Dbxref=Genbank:NP_629395.1,GeneID:1100690;Name=NP_629395.1;Note=2SC7G11.11%2C possible nucleotide-binding protein%2C len: 468 aa%3B highly similar to TR:Q54255 (EMBL:L76204) Streptomyces griseus sporulation protein%2C 470 aa%3B fasta scores: opt: 2008 z-score: 2272.9 E(): 0%3B 64.1%25 identity in 462 aa overlap. Contains Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain;gbkey=CDS;gene=2SC7G11.11;product=nucleotide-binding protein;protein_id=NP_629395.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5709951	5710235	.	+	.	ID=id6787;Dbxref=GeneID:1100690;Note=Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain%2C score 72.00%2C E-value 1.3e-17;gbkey=misc_feature;gene=2SC7G11.11
NC_003888.3	RefSeq	sequence_feature	5711079	5719670	.	-	.	ID=id6788;Note=previously sequenced DNA fragment. EMBL:AF104994 Streptomyces coelicolor A3(2) periplasmic binding protein (atrA)%2C permease (AtrB)%2C ATP-binding protein (atrC)%2C methyltransferase (metZ)%2C signal peptidase%2C Ni-containing superoxide dismutase (sodN)%2C puromycin N-acetyltransferase (pat)%2C and geranyl transferase (gtr) genes%2C complete cds%3B and unknown genes.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5711106	5711111	.	+	.	ID=id6789;gbkey=RBS
NC_003888.3	RefSeq	gene	5711116	5712276	.	+	.	ID=gene5304;Dbxref=GeneID:1100691;Name=2SC7G11.12;gbkey=Gene;gene=2SC7G11.12;gene_biotype=protein_coding;gene_synonym=2SC7G11.12,gtr;locus_tag=SCO5250
NC_003888.3	RefSeq	CDS	5711116	5712276	.	+	0	ID=cds5202;Parent=gene5304;Dbxref=Genbank:NP_629396.1,GeneID:1100691;Name=NP_629396.1;Note=2SC7G11.12%2C gtr%2C polyprenyl synthetase%2C len: 386 aa%3B previously sequenced as TR:Q9RGW1 (EMBL:AF104994) Streptomyces coelicolor A3(2) geranyl transferase Gtr%2C 386 aa. Contains Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetases and match to Prosite entry PS00723 Polyprenyl synthetases signature 1;gbkey=CDS;gene=2SC7G11.12;product=polyprenyl synthetase;protein_id=NP_629396.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5711371	5712156	.	+	.	ID=id6790;Dbxref=GeneID:1100691;Note=Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetases%2C score 157.60%2C E-value 2.1e-43;gbkey=misc_feature;gene=2SC7G11.12
NC_003888.3	RefSeq	sequence_feature	5711524	5711568	.	+	.	ID=id6791;Dbxref=GeneID:1100691;Note=PS00723 Polyprenyl synthetases signature 1;gbkey=misc_feature;gene=2SC7G11.12
NC_003888.3	RefSeq	ribosome_entry_site	5712596	5712599	.	+	.	ID=id6792;gbkey=RBS
NC_003888.3	RefSeq	gene	5712608	5713246	.	+	.	ID=gene5305;Dbxref=GeneID:1100692;Name=2SC7G11.13;gbkey=Gene;gene=2SC7G11.13;gene_biotype=protein_coding;gene_synonym=2SC7G11.13,pat;locus_tag=SCO5251
NC_003888.3	RefSeq	CDS	5712608	5713246	.	+	0	ID=cds5203;Parent=gene5305;Dbxref=Genbank:NP_629397.1,GeneID:1100692;Name=NP_629397.1;Note=2SC7G11.13%2C pat%2C acetyltransferase%2C len: 212 aa%3B previously sequenced as TR:Q9RGW2 (EMBL:AF104994) Streptomyces coelicolor A3(2) puromycin N-acetyltransferase Pat%2C 210 aa. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=2SC7G11.13;product=acetyltransferase;protein_id=NP_629397.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5712794	5713171	.	+	.	ID=id6793;Dbxref=GeneID:1100692;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 30.60%2C E-value 3.6e-05;gbkey=misc_feature;gene=2SC7G11.13
NC_003888.3	RefSeq	ribosome_entry_site	5713312	5713315	.	+	.	ID=id6794;gbkey=RBS
NC_003888.3	RefSeq	gene	5713322	5713906	.	+	.	ID=gene5306;Dbxref=GeneID:1100693;Name=2SC7G11.14;gbkey=Gene;gene=2SC7G11.14;gene_biotype=protein_coding;gene_synonym=2SC7G11.14;locus_tag=SCO5252
NC_003888.3	RefSeq	CDS	5713322	5713906	.	+	0	ID=cds5204;Parent=gene5306;Dbxref=Genbank:NP_629398.1,GeneID:1100693;Name=NP_629398.1;Note=2SC7G11.14%2C hypothetical protein%2C len: 194 aa%3B previously sequenced as TR:Q9RGW3 (EMBL:AF104994) Streptomyces coelicolor A3(2) hypothetical 18.8 kDa protein%2C 169 aa;gbkey=CDS;gene=2SC7G11.14;product=hypothetical protein;protein_id=NP_629398.1;transl_table=11
NC_003888.3	RefSeq	gene	5713933	5714154	.	+	.	ID=gene5307;Dbxref=GeneID:1100694;Name=2SC7G11.15;gbkey=Gene;gene=2SC7G11.15;gene_biotype=protein_coding;gene_synonym=2SC7G11.15;locus_tag=SCO5253
NC_003888.3	RefSeq	CDS	5713933	5714154	.	+	0	ID=cds5205;Parent=gene5307;Dbxref=Genbank:NP_629399.1,GeneID:1100694;Name=NP_629399.1;Note=2SC7G11.15%2C unknown%2C len: 73 aa;gbkey=CDS;gene=2SC7G11.15;product=hypothetical protein;protein_id=NP_629399.1;transl_table=11
NC_003888.3	RefSeq	gene	5714262	5714657	.	-	.	ID=gene5308;Dbxref=GeneID:1100695;Name=2SC7G11.16c;gbkey=Gene;gene=2SC7G11.16c;gene_biotype=protein_coding;gene_synonym=2SC7G11.16c,sodN;locus_tag=SCO5254
NC_003888.3	RefSeq	CDS	5714262	5714657	.	-	0	ID=cds5206;Parent=gene5308;Dbxref=Genbank:NP_629400.1,GeneID:1100695;Name=NP_629400.1;Note=2SC7G11.16c%2C sodN%2C superoxide dismutase%2C len: 131 aa%3B previously sequenced as TR:O51921 (EMBL:AF104994) Streptomyces coelicolor superoxide dismutase (EC 1.15.1.1) SodN%2C 131 aa;gbkey=CDS;gene=2SC7G11.16c;product=superoxide dismutase;protein_id=NP_629400.1;transl_table=11
NC_003888.3	RefSeq	gene	5714800	5715240	.	+	.	ID=gene5309;Dbxref=GeneID:1100696;Name=2SC7G11.17;gbkey=Gene;gene=2SC7G11.17;gene_biotype=protein_coding;gene_synonym=2SC7G11.17;locus_tag=SCO5255
NC_003888.3	RefSeq	CDS	5714800	5715240	.	+	0	ID=cds5207;Parent=gene5309;Dbxref=Genbank:NP_629401.1,GeneID:1100696;Name=NP_629401.1;Note=2SC7G11.17%2C signal peptidase%2C len: 146 aa%3B previously sequenced as TR:O51920 (EMBL:AF104994) Streptomyces coelicolor signal peptidase-like protein%2C 148 aa. Contains Pfam match to entry PF00461 Peptidase_S26%2C Signal peptidase I and match to Prosite entry PS00501 Signal peptidases I serine active site;gbkey=CDS;gene=2SC7G11.17;product=signal peptidase;protein_id=NP_629401.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5714869	5714973	.	+	.	ID=id6795;Dbxref=GeneID:1100696;Note=Pfam match to entry PF00461 Peptidase_S26%2C Signal peptidase I%2C score 14.90%2C E-value 0.0014;gbkey=misc_feature;gene=2SC7G11.17
NC_003888.3	RefSeq	sequence_feature	5714875	5714898	.	+	.	ID=id6796;Dbxref=GeneID:1100696;Note=PS00501 Signal peptidases I serine active site;gbkey=misc_feature;gene=2SC7G11.17
NC_003888.3	RefSeq	gene	5715144	5715773	.	-	.	ID=gene5310;Dbxref=GeneID:1100697;Name=2SC7G11.18c;gbkey=Gene;gene=2SC7G11.18c;gene_biotype=protein_coding;gene_synonym=2SC7G11.18c;locus_tag=SCO5256
NC_003888.3	RefSeq	CDS	5715144	5715773	.	-	0	ID=cds5208;Parent=gene5310;Dbxref=Genbank:NP_629402.1,GeneID:1100697;Name=NP_629402.1;Note=2SC7G11.18c%2C hypothetical protein%2C len: 209 aa%3B similar to TR:CAB70944 (EMBL:AL137778) Streptomyces coelicolor hypothetical 20.3 kDa protein SCL2.32%2C 186 aa%3B fasta scores: opt: 314 z-score: 396.2 E(): 1.3e-14%3B 36.6%25 identity in 183 aa overlap;gbkey=CDS;gene=2SC7G11.18c;product=hypothetical protein;protein_id=NP_629402.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5715861	5715866	.	+	.	ID=id6797;gbkey=RBS
NC_003888.3	RefSeq	gene	5715872	5716681	.	+	.	ID=gene5311;Dbxref=GeneID:1100698;Name=2SC7G11.19;gbkey=Gene;gene=2SC7G11.19;gene_biotype=protein_coding;gene_synonym=2SC7G11.19,metZ;locus_tag=SCO5257
NC_003888.3	RefSeq	CDS	5715872	5716681	.	+	0	ID=cds5209;Parent=gene5311;Dbxref=Genbank:NP_629403.1,GeneID:1100698;Name=NP_629403.1;Note=2SC7G11.19%2C metZ%2C methyltransferase%2C len: 269 aa%3B previously sequenced as TR:Q9RGW5 (EMBL:AF104994) Streptomyces coelicolor A3(2) methyltransferase MetZ%2C 268 aa;gbkey=CDS;gene=2SC7G11.19;product=methyltransferase;protein_id=NP_629403.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	5716696	5716749	.	-	.	ID=id6798;Note=possible stem loop. Score 64: 24/26 (92%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5716760	5717521	.	-	.	ID=gene5312;Dbxref=GeneID:1100699;Name=2SC7G11.20c;gbkey=Gene;gene=2SC7G11.20c;gene_biotype=protein_coding;gene_synonym=2SC7G11.20c,atrC;locus_tag=SCO5258
NC_003888.3	RefSeq	CDS	5716760	5717521	.	-	0	ID=cds5210;Parent=gene5312;Dbxref=Genbank:NP_629404.1,GeneID:1100699;Name=NP_629404.1;Note=2SC7G11.20c%2C atrC%2C ATP-binding protein%2C len: 253 aa%3B previously sequenced as TR:Q9RGW6 (EMBL:AF104994) Streptomyces coelicolor A3(2) ATP-binding protein AtrC%2C 239 aa. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=2SC7G11.20c;product=ATP-binding protein;protein_id=NP_629404.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5716847	5717434	.	-	.	ID=id6799;Dbxref=GeneID:1100699;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 228.00%2C E-value 1.4e-64;gbkey=misc_feature;gene=2SC7G11.20c
NC_003888.3	RefSeq	sequence_feature	5717030	5717074	.	-	.	ID=id6800;Dbxref=GeneID:1100699;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SC7G11.20c
NC_003888.3	RefSeq	sequence_feature	5717390	5717413	.	-	.	ID=id6801;Dbxref=GeneID:1100699;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC7G11.20c
NC_003888.3	RefSeq	gene	5717518	5718468	.	-	.	ID=gene5313;Dbxref=GeneID:1100700;Name=2SC7G11.21c;gbkey=Gene;gene=2SC7G11.21c;gene_biotype=protein_coding;gene_synonym=2SC7G11.21c,atrB;locus_tag=SCO5259
NC_003888.3	RefSeq	CDS	5717518	5718468	.	-	0	ID=cds5211;Parent=gene5313;Dbxref=Genbank:NP_629405.1,GeneID:1100700;Name=NP_629405.1;Note=2SC7G11.21c%2C atrB%2C permease%2C len: 316 aa%3B previously sequenced as TR:Q9RGW7 (EMBL:AF104994) Streptomyces coelicolor A3(2) permease AtrB%2C 313 aa. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=2SC7G11.21c;product=permease;protein_id=NP_629405.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5717526	5717532	.	-	.	ID=id6802;Dbxref=GeneID:1100700;gbkey=RBS;gene=2SC7G11.21c
NC_003888.3	RefSeq	sequence_feature	5717725	5717937	.	-	.	ID=id6803;Dbxref=GeneID:1100700;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 63.60%2C E-value 4.4e-15;gbkey=misc_feature;gene=2SC7G11.21c
NC_003888.3	RefSeq	sequence_feature	5717848	5717934	.	-	.	ID=id6804;Dbxref=GeneID:1100700;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=2SC7G11.21c
NC_003888.3	RefSeq	gene	5718499	5719461	.	-	.	ID=gene5314;Dbxref=GeneID:1100701;Name=2SC7G11.22c;gbkey=Gene;gene=2SC7G11.22c;gene_biotype=protein_coding;gene_synonym=2SC7G11.22c,atrA;locus_tag=SCO5260
NC_003888.3	RefSeq	CDS	5718499	5719461	.	-	0	ID=cds5212;Parent=gene5314;Dbxref=Genbank:NP_629406.1,GeneID:1100701;Name=NP_629406.1;Note=2SC7G11.22c%2C atrA%2C hypothetical protein%2C len: 321 aa%3B identical to previously sequenced TR:Q9RGW8 (EMBL:AF104994) Streptomyces coelicolor A3(2) periplasmic binding protein AtrA%2C 321 aa. Contains Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3 and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=2SC7G11.22c;product=hypothetical protein;protein_id=NP_629406.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5718547	5719338	.	-	.	ID=id6805;Dbxref=GeneID:1100701;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 154.50%2C E-value 1.8e-42;gbkey=misc_feature;gene=2SC7G11.22c
NC_003888.3	RefSeq	sequence_feature	5719363	5719395	.	-	.	ID=id6806;Dbxref=GeneID:1100701;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=2SC7G11.22c
NC_003888.3	RefSeq	gene	5720101	5721330	.	+	.	ID=gene5315;Dbxref=GeneID:1100702;Name=2SC7G11.23;gbkey=Gene;gene=2SC7G11.23;gene_biotype=protein_coding;gene_synonym=2SC7G11.23;locus_tag=SCO5261
NC_003888.3	RefSeq	CDS	5720101	5721330	.	+	0	ID=cds5213;Parent=gene5315;Dbxref=Genbank:NP_629407.1,GeneID:1100702;Name=NP_629407.1;Note=2SC7G11.23%2C probable malate oxidoreductase%2C len: 409 aa%3B similar to SW:MAOX_BACST (EMBL:M19485) Bacillus stearothermophilus NAD-dependent malic enzyme (EC 1.1.1.38)%2C 478 aa%3B fasta scores: opt: 1385 z-score: 1470.9 E(): 0%3B 55.0%25 identity in 391 aa overlap. Contains 2x Pfam matches to entry PF00390 malic%2C Malic enzyme;gbkey=CDS;gene=2SC7G11.23;product=malate oxidoreductase;protein_id=NP_629407.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5720614	5720784	.	+	.	ID=id6807;Dbxref=GeneID:1100702;Note=Pfam match to entry PF00390 malic%2C Malic enzyme%2C score 22.00%2C E-value 0.00016;gbkey=misc_feature;gene=2SC7G11.23
NC_003888.3	RefSeq	sequence_feature	5721076	5721222	.	+	.	ID=id6808;Dbxref=GeneID:1100702;Note=Pfam match to entry PF00390 malic%2C Malic enzyme%2C score 28.70%2C E-value 3.3e-06;gbkey=misc_feature;gene=2SC7G11.23
NC_003888.3	RefSeq	gene	5721695	5722660	.	+	.	ID=gene5316;Dbxref=GeneID:1100703;Name=2SC7G11.24;gbkey=Gene;gene=2SC7G11.24;gene_biotype=protein_coding;gene_synonym=2SC7G11.24;locus_tag=SCO5262
NC_003888.3	RefSeq	CDS	5721695	5722660	.	+	0	ID=cds5214;Parent=gene5316;Dbxref=Genbank:NP_629408.1,GeneID:1100703;Name=NP_629408.1;Note=2SC7G11.24%2C possible dehydrogenase%2C len: 321 aa%3B similar to SW:ADH3_BACST (EMBL:Z27089) Bacillus stearothermophilus alcohol dehydrogenase (EC 1.1.1.1)%2C 339 aa%3B fasta scores: opt: 303 z-score: 344.3 E(): 1e-11%3B 28.0%25 identity in 328 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=2SC7G11.24;product=dehydrogenase;protein_id=NP_629408.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5721743	5722654	.	+	.	ID=id6809;Dbxref=GeneID:1100703;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 189.00%2C E-value 7.5e-53;gbkey=misc_feature;gene=2SC7G11.24
NC_003888.3	RefSeq	ribosome_entry_site	5722988	5722992	.	+	.	ID=id6810;gbkey=RBS
NC_003888.3	RefSeq	gene	5722998	5723564	.	+	.	ID=gene5317;Dbxref=GeneID:1100704;Name=2SC7G11.25;gbkey=Gene;gene=2SC7G11.25;gene_biotype=protein_coding;gene_synonym=2SC7G11.25;locus_tag=SCO5263
NC_003888.3	RefSeq	CDS	5722998	5723564	.	+	0	ID=cds5215;Parent=gene5317;Dbxref=Genbank:NP_629409.1,GeneID:1100704;Name=NP_629409.1;Note=2SC7G11.25%2C unknown%2C len: 188 aa;gbkey=CDS;gene=2SC7G11.25;product=hypothetical protein;protein_id=NP_629409.1;transl_table=11
NC_003888.3	RefSeq	gene	5723633	5724715	.	-	.	ID=gene5318;Dbxref=GeneID:1100705;Name=2SC7G11.26c;gbkey=Gene;gene=2SC7G11.26c;gene_biotype=protein_coding;gene_synonym=2SC7G11.26c;locus_tag=SCO5264
NC_003888.3	RefSeq	CDS	5723633	5724715	.	-	0	ID=cds5216;Parent=gene5318;Dbxref=Genbank:NP_629410.1,GeneID:1100705;Name=NP_629410.1;Note=2SC7G11.26c%2C unknown%2C len: 360 aa. Contains possible coiled-coil region at approx. residues 157..212. High content in alanine%2C glutamic acid and arginine amino acid residues. Also highly hydrophilic;gbkey=CDS;gene=2SC7G11.26c;product=hypothetical protein;protein_id=NP_629410.1;transl_table=11
NC_003888.3	RefSeq	gene	5724717	5725718	.	-	.	ID=gene5319;Dbxref=GeneID:1100706;Name=2SC7G11.27c;gbkey=Gene;gene=2SC7G11.27c;gene_biotype=protein_coding;gene_synonym=2SC7G11.27c;locus_tag=SCO5265
NC_003888.3	RefSeq	CDS	5724717	5725718	.	-	0	ID=cds5217;Parent=gene5319;Dbxref=Genbank:NP_629411.1,GeneID:1100706;Name=NP_629411.1;Note=2SC7G11.27c%2C hypothetical protein%2C len: 333 aa%3B low similarity to TR:O32200 (EMBL:Z99120) Bacillus subtilis YvqG protein%2C 240 aa%3B fasta scores: opt: 172 z-score: 193.3 E(): 0.0027%3B 25.0%25 identity in 244 aa overlap;gbkey=CDS;gene=2SC7G11.27c;product=hypothetical protein;protein_id=NP_629411.1;transl_table=11
NC_003888.3	RefSeq	gene	5725804	5726637	.	+	.	ID=gene5320;Dbxref=GeneID:1100707;Name=2SC7G11.28;gbkey=Gene;gene=2SC7G11.28;gene_biotype=protein_coding;gene_synonym=2SC7G11.28;locus_tag=SCO5266
NC_003888.3	RefSeq	CDS	5725804	5726637	.	+	0	ID=cds5218;Parent=gene5320;Dbxref=Genbank:NP_629412.1,GeneID:1100707;Name=NP_629412.1;Note=2SC7G11.28%2C membrane protei%2C len: 277 aa%3B similar to N-terminal region of TR:CAB76994 (EMBL:AL159178) Streptomyces coelicolor integral membrane protein SCH22.25%2C 456 aa%3B fasta scores: opt: 141 z-score: 157.1 E(): 0.28%3B 29.3%25 identity in 263 aa overlap. Contains matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=2SC7G11.28;product=hypothetical protein;protein_id=NP_629412.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5725906	5725929	.	+	.	ID=id6811;Dbxref=GeneID:1100707;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC7G11.28
NC_003888.3	RefSeq	sequence_feature	5726245	5726289	.	+	.	ID=id6812;Dbxref=GeneID:1100707;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SC7G11.28
NC_003888.3	RefSeq	gene	5726890	5727075	.	-	.	ID=gene5321;Dbxref=GeneID:1100708;Name=2SC7G11.29c;gbkey=Gene;gene=2SC7G11.29c;gene_biotype=protein_coding;gene_synonym=2SC7G11.29c;locus_tag=SCO5267
NC_003888.3	RefSeq	CDS	5726890	5727075	.	-	0	ID=cds5219;Parent=gene5321;Dbxref=Genbank:NP_629413.1,GeneID:1100708;Name=NP_629413.1;Note=2SC7G11.29c%2C unknown%2C len: 61 aa. High content in glutamic acid amino acid residues;gbkey=CDS;gene=2SC7G11.29c;product=hypothetical protein;protein_id=NP_629413.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5727084	5727087	.	-	.	ID=id6813;gbkey=RBS
NC_003888.3	RefSeq	gene	5727255	5727725	.	+	.	ID=gene5322;Dbxref=GeneID:1100709;Name=2SC7G11.30;gbkey=Gene;gene=2SC7G11.30;gene_biotype=protein_coding;gene_synonym=2SC7G11.30;locus_tag=SCO5268
NC_003888.3	RefSeq	CDS	5727255	5727725	.	+	0	ID=cds5220;Parent=gene5322;Dbxref=Genbank:NP_629414.1,GeneID:1100709;Name=NP_629414.1;Note=2SC7G11.30%2C unknown%2C len: 156 aa;gbkey=CDS;gene=2SC7G11.30;product=hypothetical protein;protein_id=NP_629414.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5727712	5727715	.	+	.	ID=id6814;Dbxref=GeneID:1100709;gbkey=RBS;gene=2SC7G11.30
NC_003888.3	RefSeq	gene	5727722	5729959	.	+	.	ID=gene5323;Dbxref=GeneID:1100710;Name=2SC7G11.31;gbkey=Gene;gene=2SC7G11.31;gene_biotype=protein_coding;gene_synonym=2SC7G11.31;locus_tag=SCO5269
NC_003888.3	RefSeq	CDS	5727722	5729959	.	+	0	ID=cds5221;Parent=gene5323;Dbxref=Genbank:NP_629415.1,GeneID:1100710;Name=NP_629415.1;Note=2SC7G11.31%2C unknown%2C len: 745 aa. Contains 2 conserved repeat regions: 2x GENPEY and 4x GHGAYP;gbkey=CDS;gene=2SC7G11.31;product=hypothetical protein;protein_id=NP_629415.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5729336	5729371	.	+	.	ID=id6815;Dbxref=GeneID:1100710;Note=2x conserved repeat translated in 2SC7G11.09c;gbkey=repeat_region;gene=2SC7G11.31
NC_003888.3	RefSeq	repeat_region	5729384	5729455	.	+	.	ID=id6816;Dbxref=GeneID:1100710;gbkey=repeat_region;gene=2SC7G11.31
NC_003888.3	RefSeq	ribosome_entry_site	5730117	5730120	.	+	.	ID=id6817;gbkey=RBS
NC_003888.3	RefSeq	gene	5730129	5731151	.	+	.	ID=gene5324;Dbxref=GeneID:1100711;Name=2SC7G11.32;gbkey=Gene;gene=2SC7G11.32;gene_biotype=protein_coding;gene_synonym=2SC7G11.32;locus_tag=SCO5270
NC_003888.3	RefSeq	CDS	5730129	5731151	.	+	0	ID=cds5222;Parent=gene5324;Dbxref=Genbank:NP_629416.1,GeneID:1100711;Name=NP_629416.1;Note=2SC7G11.32%2C conserved hypothetical protein%2C len: 340 aa%3B similar to TR:CAB86114 (EMBL:AL163003) Streptomyces coelicolor hypothetical 37.1 kDa protein SCC24.20%2C 340 aa%3B fasta scores: opt: 1113 z-score: 1224.6 E(): 0%3B 54.5%25 identity in 343 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SC7G11.32;product=hypothetical protein;protein_id=NP_629416.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5730375	5730398	.	+	.	ID=id6818;Dbxref=GeneID:1100711;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC7G11.32
NC_003888.3	RefSeq	ribosome_entry_site	5731145	5731151	.	+	.	ID=id6819;Dbxref=GeneID:1100711;gbkey=RBS;gene=2SC7G11.32
NC_003888.3	RefSeq	repeat_region	5731201	5731281	.	+	.	ID=id6820;Note=9x degenerate repeat:(T/C)CCGG(T/C)(G/A)(G/C)C;gbkey=repeat_region
NC_003888.3	RefSeq	gene	5731309	5734599	.	+	.	ID=gene5325;Dbxref=GeneID:1100712;Name=2SC7G11.33c;gbkey=Gene;gene=2SC7G11.33c;gene_biotype=protein_coding;gene_synonym=2SC7G11.33c;locus_tag=SCO5271
NC_003888.3	RefSeq	CDS	5731309	5734599	.	+	0	ID=cds5223;Parent=gene5325;Dbxref=Genbank:NP_629417.1,GeneID:1100712;Name=NP_629417.1;Note=2SC7G11.33%2C hypothetical protein%2C len: 1096 aa%3B similar to TR:CAB86115 (EMBL:AL163003) Streptomyces coelicolor hypothetical 145.7 kDa protein SCC24.21%2C 1349 aa%3B fasta scores: opt: 758 z-score: 652.1 E(): 7.4e-29%3B 29.8%25 identity in 1157 aa overlap. Contains a possible coiled-coil region at approx. residues 1011..1029;gbkey=CDS;gene=2SC7G11.33c;product=hypothetical protein;protein_id=NP_629417.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5734608	5734611	.	+	.	ID=id6821;gbkey=RBS
NC_003888.3	RefSeq	gene	5734620	5734814	.	+	.	ID=gene5326;Dbxref=GeneID:1100713;Name=2SC7G11.34;gbkey=Gene;gene=2SC7G11.34;gene_biotype=protein_coding;gene_synonym=2SC7G11.34;locus_tag=SCO5272
NC_003888.3	RefSeq	CDS	5734620	5734814	.	+	0	ID=cds5224;Parent=gene5326;Dbxref=Genbank:NP_629418.1,GeneID:1100713;Name=NP_629418.1;Note=2SC7G11.34%2C unknown%2C len: 64 aa;gbkey=CDS;gene=2SC7G11.34;product=hypothetical protein;protein_id=NP_629418.1;transl_table=11
NC_003888.3	RefSeq	gene	5734882	5736744	.	+	.	ID=gene5327;Dbxref=GeneID:1100714;Name=2SC7G11.35;gbkey=Gene;gene=2SC7G11.35;gene_biotype=protein_coding;gene_synonym=2SC7G11.35;locus_tag=SCO5273
NC_003888.3	RefSeq	CDS	5734882	5736744	.	+	0	ID=cds5225;Parent=gene5327;Dbxref=Genbank:NP_629419.1,GeneID:1100714;Name=NP_629419.1;Note=2SC7G11.35%2C hypothetical protein%2C len: 620 aa%3B N-terminal region similar to SW:ASLB_ECOLI (EMBL:M87049) Escherichia coli  arylsulfatase regulatory protein AslB%2C 411 aa%3B blastp (consecutive) scores: Score%3D 166 (58.4 bits)%2C Expec %3D 2.6e-19%2C Sum P(2)%3D 2.6e-19%2C Identities%3D 57/184 (30%25)%2C Positives%3D 82/184 (44%25) and Score%3D 141 (49.6 bits)%2C Expect%3D 2.6e-19%2C Sum P(2 %3D 2.6e-19%2C Identities%3D 47/165 (28%25)%2C Positives%3D 73/165 (44%25). Contains Pfam match to entry PF01444 MoaA_NifB_PqqE%2C moaA / nifB / pqqE family;gbkey=CDS;gene=2SC7G11.35;product=hypothetical protein;protein_id=NP_629419.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5735212	5735862	.	+	.	ID=id6822;Dbxref=GeneID:1100714;Note=Pfam match to entry PF01444 MoaA_NifB_PqqE%2C moaA / nifB / pqqE family%2C score -15.40%2C E-value 0.0013;gbkey=misc_feature;gene=2SC7G11.35
NC_003888.3	RefSeq	sequence_feature	5736130	5736741	.	+	.	ID=id6823;Dbxref=GeneID:1100714;Note=alanine%2C proline%2C serine and glycine amino acids rich region. Also high G+C content (80.22%25);gbkey=misc_feature;gene=2SC7G11.35
NC_003888.3	RefSeq	gene	5736744	5738369	.	+	.	ID=gene5328;Dbxref=GeneID:1100715;Name=2SC7G11.36;gbkey=Gene;gene=2SC7G11.36;gene_biotype=protein_coding;gene_synonym=2SC7G11.36;locus_tag=SCO5274
NC_003888.3	RefSeq	CDS	5736744	5738369	.	+	0	ID=cds5226;Parent=gene5328;Dbxref=Genbank:NP_629420.1,GeneID:1100715;Name=NP_629420.1;Note=2SC7G11.36%2C unknown%2C len: 541 aa. High content in alanine amino acid residues and in G+C (77.57%25). Also contains 3x degenerate repeat: DA(P/T)GA(W/R)(G/S)(T/S)(4);gbkey=CDS;gene=2SC7G11.36;product=hypothetical protein;protein_id=NP_629420.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5737029	5737134	.	+	.	ID=id6824;Dbxref=GeneID:1100715;Note=3x degenerate repeat unit translated in 2SC7G11.04c;gbkey=repeat_region;gene=2SC7G11.36
NC_003888.3	RefSeq	ribosome_entry_site	5738486	5738490	.	+	.	ID=id6825;gbkey=RBS
NC_003888.3	RefSeq	gene	5738498	5741521	.	+	.	ID=gene5329;Dbxref=GeneID:1100716;Name=2SC7G11.37;gbkey=Gene;gene=2SC7G11.37;gene_biotype=protein_coding;gene_synonym=2SC7G11.37;locus_tag=SCO5275
NC_003888.3	RefSeq	CDS	5738498	5741521	.	+	0	ID=cds5227;Parent=gene5329;Dbxref=Genbank:NP_629421.1,GeneID:1100716;Name=NP_629421.1;Note=2SC7G11.37%2C possible ATP/GTP binding protein%2C len: 1007 aa%3B similar to (EMBL:AL391588) Streptomyces coelicolor SCCB12.04%2C 1148 aa%3B fasta scores: opt: 4019 z-score: 3915.8 E(): 0%3B 62.6%25 identity in 994 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=2SC7G11.37;product=ATP/GTP binding protein;protein_id=NP_629421.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5739128	5739151	.	+	.	ID=id6826;Dbxref=GeneID:1100716;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC7G11.37
NC_003888.3	RefSeq	ribosome_entry_site	5741643	5741646	.	+	.	ID=id6827;gbkey=RBS
NC_003888.3	RefSeq	gene	5741653	5742078	.	+	.	ID=gene5330;Dbxref=GeneID:1100717;Name=2SC7G11.38;gbkey=Gene;gene=2SC7G11.38;gene_biotype=protein_coding;gene_synonym=2SC7G11.38;locus_tag=SCO5276
NC_003888.3	RefSeq	CDS	5741653	5742078	.	+	0	ID=cds5228;Parent=gene5330;Dbxref=Genbank:NP_629422.1,GeneID:1100717;Name=NP_629422.1;Note=2SC7G11.38%2C conserved hypothetical protein%2C len: 141 aa%3B similar to TR:CAB86112 (EMBL:AL163003) Streptomyces coelicolor hypothetical 16.0 kDa protein SCC24.18%2C 153 aa%3B fasta scores: opt: 178 z-score: 212.6 E(): 0.00023%3B 32.4%25 identity in 145 aa overlap;gbkey=CDS;gene=2SC7G11.38;product=hypothetical protein;protein_id=NP_629422.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5741659	5741661	.	+	.	ID=id6828;Dbxref=GeneID:1100717;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=2SC7G11.38
NC_003888.3	RefSeq	gene	5742087	5743016	.	+	.	ID=gene5331;Dbxref=GeneID:1100718;Name=2SC7G11.39;gbkey=Gene;gene=2SC7G11.39;gene_biotype=protein_coding;gene_synonym=2SC7G11.39,SCCB12.01;locus_tag=SCO5277
NC_003888.3	RefSeq	CDS	5742087	5743016	.	+	0	ID=cds5229;Parent=gene5331;Dbxref=Genbank:NP_733659.1,GeneID:1100718;Name=NP_733659.1;Note=SCCB12.01%2C possible ion chelatase subunit (fragment)%2C len: >98 aa%3B similar to SW:BCHI_RHOCA (EMBL:Z11165) Rhodobacter capsulatus magnesium-chelatase 38 Kda subunit (MG-protoporphyrin IX chelatase) BchI%2C 350 aa%3B fasta scores: opt: 163 z-score: 216.2 E(): 0.00014%3B 38.1%25 identity in 97 aa overlap~2SC7G11.39%2C possible magnesium chelatase (fragment)%2C len: >248 aa%3B similar to SW:BCHI_CHLVI (EMBL:Z83933) Chlorobium vibrioforme magnesium-chelatase 38 kDa subunit (MG-protoporphyrin IX chelatase) BchI%2C 346 aa%3B fasta scores: opt: 441 z-score: 520.9 E(): 1.5e-21%3B 38.5%25 identity in 283 aa overlap. Contains Pfam match to entry PF01078 Mg_chelatase%2C Magnesium chelatase%2C subunit ChlI;gbkey=CDS;gene=2SC7G11.39;product=magnesium chelatase;protein_id=NP_733659.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5742147	5742830	.	+	.	ID=id6829;Dbxref=GeneID:1100718;Note=Pfam match to entry PF01078 Mg_chelatase%2C Magnesium chelatase%2C subunit ChlI%2C score 7.70%2C E-value 6.3e-09;gbkey=misc_feature;gene=2SC7G11.39
NC_003888.3	RefSeq	ribosome_entry_site	5743008	5743012	.	+	.	ID=id6830;Dbxref=GeneID:1100718;gbkey=RBS;gene=2SC7G11.39
NC_003888.3	RefSeq	gene	5743022	5744989	.	+	.	ID=gene5332;Dbxref=GeneID:1100719;Name=SCCB12.02;gbkey=Gene;gene=SCCB12.02;gene_biotype=protein_coding;gene_synonym=SCCB12.02;locus_tag=SCO5278
NC_003888.3	RefSeq	CDS	5743022	5744989	.	+	0	ID=cds5230;Parent=gene5332;Dbxref=Genbank:NP_629423.1,GeneID:1100719;Name=NP_629423.1;Note=SCCB12.02%2C possible ion chelatase%2C len: 655 aa%3B similar to TR: SW:CHLD_SYNP7 (EMBL:AB003135) Synechococcus sp. magnesium-chelatase subunit ChlD (MG-protoporphyrin IX chelatase) ChlD%2C 677 aa%3B fasta scores: opt: 304 z-score: 269.4 E(): 1.5e-07%3B 26.6%25 identity in 688 aa overlap;gbkey=CDS;gene=SCCB12.02;product=magnesium chelatase;protein_id=NP_629423.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5745059	5745062	.	+	.	ID=id6831;gbkey=RBS
NC_003888.3	RefSeq	gene	5745066	5746304	.	+	.	ID=gene5333;Dbxref=GeneID:1100720;Name=SCCB12.03;gbkey=Gene;gene=SCCB12.03;gene_biotype=protein_coding;gene_synonym=SCCB12.03;locus_tag=SCO5279
NC_003888.3	RefSeq	CDS	5745066	5746304	.	+	0	ID=cds5231;Parent=gene5333;Dbxref=Genbank:NP_629424.1,GeneID:1100720;Name=NP_629424.1;Note=SCCB12.03%2C unknown%2C len: 412 aa;gbkey=CDS;gene=SCCB12.03;product=hypothetical protein;protein_id=NP_629424.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5746290	5746294	.	+	.	ID=id6832;Dbxref=GeneID:1100720;gbkey=RBS;gene=SCCB12.03
NC_003888.3	RefSeq	gene	5746301	5749747	.	+	.	ID=gene5334;Dbxref=GeneID:1100721;Name=SCCB12.04;gbkey=Gene;gene=SCCB12.04;gene_biotype=protein_coding;gene_synonym=SCCB12.04;locus_tag=SCO5280
NC_003888.3	RefSeq	CDS	5746301	5749747	.	+	0	ID=cds5232;Parent=gene5334;Dbxref=Genbank:NP_629425.1,GeneID:1100721;Name=NP_629425.1;Note=SCCB12.04%2C possible ATP-binding protein%2C len: 1148 aa%3B similar to TR:CAB77406 (EMBL:AL160431) Streptomyces coelicolor  ATP-binding protein SCD82.03%2C 966 aa%3B fasta scores: opt: 798 z-score: 834.6 E(): 0%3B 31.7%25 identity in 977 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCCB12.04;product=ATP-binding protein;protein_id=NP_629425.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5747375	5747398	.	+	.	ID=id6833;Dbxref=GeneID:1100721;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCCB12.04
NC_003888.3	RefSeq	gene	5749846	5753664	.	-	.	ID=gene5335;Dbxref=GeneID:1100722;Name=kgd;gbkey=Gene;gene=kgd;gene_biotype=protein_coding;gene_synonym=SCCB12.05c;locus_tag=SCO5281
NC_003888.3	RefSeq	CDS	5749846	5753664	.	-	0	ID=cds5233;Parent=gene5335;Dbxref=Genbank:NP_629426.1,GeneID:1100722;Name=NP_629426.1;Note=kgd%3B produces succinic semialdehyde%3B part of alternative pathway from alpha-ketoglutarate to succinate%3B essential for normal growth;gbkey=CDS;gene=kgd;product=alpha-ketoglutarate decarboxylase;protein_id=NP_629426.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5751070	5752053	.	-	.	ID=id6834;Dbxref=GeneID:1100722;Note=Pfam match to entry PF00676 E1_dehydrog%2C Dehydrogenase E1 component%2C score 166.60%2C E-value 4.1e-46;gbkey=misc_feature;gene=kgd
NC_003888.3	RefSeq	sequence_feature	5752501	5753181	.	-	.	ID=id6835;Dbxref=GeneID:1100722;Note=Pfam match to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain)%2C score 42.90%2C E-value 5.8e-12;gbkey=misc_feature;gene=kgd
NC_003888.3	RefSeq	sequence_feature	5753215	5753478	.	-	.	ID=id6836;Dbxref=GeneID:1100722;Note=proline and alanine rich region. High G+C content: 88.63%25;gbkey=misc_feature;gene=kgd
NC_003888.3	RefSeq	gene	5753949	5755076	.	-	.	ID=gene5336;Dbxref=GeneID:1100723;Name=SCCB12.06c;gbkey=Gene;gene=SCCB12.06c;gene_biotype=protein_coding;gene_synonym=SCCB12.06c;locus_tag=SCO5282
NC_003888.3	RefSeq	CDS	5753949	5755076	.	-	0	ID=cds5234;Parent=gene5336;Dbxref=Genbank:NP_629427.1,GeneID:1100723;Name=NP_629427.1;Note=SCCB12.06c%2C possible two-component system sensor kinase%2C len: 375 aa%3B similar to SW:AFQ2_STRCO (EMBL:D10654) Streptomyces coelicolor sensor protein AfsQ2%2C 535 aa%3B fasta scores: opt: 344 z-score: 382.3 E(): 7.9e-14%3B 32.5%25 identity in 335 aa overlap. Contains Pfam matches to entries PF00672 DUF5%2C HAMP domain and PF00512 signal%2C Histidine kinase. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCCB12.06c;product=two-component system sensor kinase;protein_id=NP_629427.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5753973	5754653	.	-	.	ID=id6837;Dbxref=GeneID:1100723;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 173.10%2C E-value 4.7e-48;gbkey=misc_feature;gene=SCCB12.06c
NC_003888.3	RefSeq	sequence_feature	5754693	5754902	.	-	.	ID=id6838;Dbxref=GeneID:1100723;Note=Pfam match to entry PF00672 DUF5%2C HAMP domain%2C score 72.10%2C E-value 1.2e-17;gbkey=misc_feature;gene=SCCB12.06c
NC_003888.3	RefSeq	gene	5755073	5755807	.	-	.	ID=gene5337;Dbxref=GeneID:1100724;Name=SCCB12.07c;gbkey=Gene;gene=SCCB12.07c;gene_biotype=protein_coding;gene_synonym=SCCB12.07c;locus_tag=SCO5283
NC_003888.3	RefSeq	CDS	5755073	5755807	.	-	0	ID=cds5235;Parent=gene5337;Dbxref=Genbank:NP_629428.1,GeneID:1100724;Name=NP_629428.1;Note=SCCB12.07c%2C possible two-component system response regulator%2C len: 244 aa%3B similar to TR:Q9ZEP4 (EMBL:AJ131213) Streptomyces coelicolor response regulator CseB or SCE94.09%2C 234 aa%3B fasta scores: opt: 632 z-score: 771.1 E(): 0%3B 44.3%25 identity in 230 aa overlap and to SW:RESD_BACSU (EMBL:L09228)%2C 240 aa%3B fasta scores: opt: 573 z-score: 699.9 E(): 1.6e-31%3B 39.7%25 identity in 234 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal;gbkey=CDS;gene=SCCB12.07c;product=two-component system response regulator;protein_id=NP_629428.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5755100	5755303	.	-	.	ID=id6839;Dbxref=GeneID:1100724;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 107.00%2C E-value 1.1e-30;gbkey=misc_feature;gene=SCCB12.07c
NC_003888.3	RefSeq	sequence_feature	5755424	5755756	.	-	.	ID=id6840;Dbxref=GeneID:1100724;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 122.60%2C E-value 7.2e-33;gbkey=misc_feature;gene=SCCB12.07c
NC_003888.3	RefSeq	gene	5755921	5756628	.	-	.	ID=gene5338;Dbxref=GeneID:1100725;Name=SCCB12.08c;gbkey=Gene;gene=SCCB12.08c;gene_biotype=protein_coding;gene_synonym=SCCB12.08c;locus_tag=SCO5284
NC_003888.3	RefSeq	CDS	5755921	5756628	.	-	0	ID=cds5236;Parent=gene5338;Dbxref=Genbank:NP_629429.1,GeneID:1100725;Name=NP_629429.1;Note=SCCB12.08c%2C hypothetical protein%2C len: 235 aa%3B similar to TR:Q9RVH7 (EMBL:AE001956) Deinococcus radiodurans hypothetical 24.5 kDa protein DR1052%2C 230 aa%3B fasta scores: opt: 403 z-score: 466.7 E(): 1.6e-18%3B 38.5%25 identity in 218 aa overlap and to SW:SPEE_ECOLI (EMBL:J02804) Escherichia coli spermidine synthase (EC 2.5.1.16) SpeE%2C 287 aa%3B fasta scores: opt: 173 z-score: 204.7 E(): 0.00063%3B 31.9%25 identity in 119 aa overlap;gbkey=CDS;gene=SCCB12.08c;product=hypothetical protein;protein_id=NP_629429.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5756636	5756642	.	-	.	ID=id6841;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5756800	5756803	.	+	.	ID=id6842;gbkey=RBS
NC_003888.3	RefSeq	gene	5756807	5759230	.	+	.	ID=gene5339;Dbxref=GeneID:1100726;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;gene_synonym=lon,SCCB12.09;locus_tag=SCO5285
NC_003888.3	RefSeq	CDS	5756807	5759230	.	+	0	ID=cds5237;Parent=gene5339;Dbxref=Genbank:NP_629430.1,GeneID:1100726;Name=NP_629430.1;Note=SCCB12.09%2C lon%2C ATP-dependent protease%2C len: 807 aa%3B similar to SW:LON_MYCSM (EMBL:AF030688) Mycobacterium smegmatis ATP-dependent protease LA (EC 3.4.21.53) Lon%2C 779 aa%3B fasta scores: opt: 2550 z-score: 2489.6 E(): 0%3B 64.7%25 identity in 785 aa overlap. Contains Pfam matches to entries PF02190 LON%2C ATP-dependent protease La (LON) domain and PF00004 AAA%2C ATPases associated with various cellular activities (AAA) and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS01046 ATP-dependent serine proteases%2C lon family%2C serine active site;gbkey=CDS;gene=lon;product=ATP-dependent protease;protein_id=NP_629430.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5756840	5757415	.	+	.	ID=id6843;Dbxref=GeneID:1100726;Note=Pfam match to entry PF02190 LON%2C ATP-dependent protease La (LON) domain%2C score -18.10%2C E-value 0.00014;gbkey=misc_feature;gene=lon
NC_003888.3	RefSeq	sequence_feature	5757893	5758480	.	+	.	ID=id6844;Dbxref=GeneID:1100726;Note=Pfam match to entry PF00004 AAA%2C ATPases associated with various cellular activities (AAA)%2C score 103.40%2C E-value 4.6e-27;gbkey=misc_feature;gene=lon
NC_003888.3	RefSeq	sequence_feature	5757908	5757931	.	+	.	ID=id6845;Dbxref=GeneID:1100726;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=lon
NC_003888.3	RefSeq	sequence_feature	5758895	5758921	.	+	.	ID=id6846;Dbxref=GeneID:1100726;Note=PS01046 ATP-dependent serine proteases%2C lon family%2C serine active site;gbkey=misc_feature;gene=lon
NC_003888.3	RefSeq	gene	5759307	5760134	.	-	.	ID=gene5340;Dbxref=GeneID:1100727;Name=SCCB12.10c;gbkey=Gene;gene=SCCB12.10c;gene_biotype=protein_coding;gene_synonym=SCCB12.10c;locus_tag=SCO5286
NC_003888.3	RefSeq	CDS	5759307	5760134	.	-	0	ID=cds5238;Parent=gene5340;Dbxref=Genbank:NP_629431.1,GeneID:1100727;Name=NP_629431.1;Note=SCCB12.10c%2C probable  hydrolase%2C len: 275 aa%3B similar to SW:LYCM_STRGL (EMBL:M30645) Streptomyces globisporus lysozyme M1 precursor (EC 3.2.1.17) Acm%2C 294 aa%3B fasta scores: opt: 828 z-score: 944.2 E(): 0%3B 45.7%25 identity in 291 aa overlap and to TR:Q9RJP9 (EMBL:AL132991) Streptomyces coelicolor lysozyme precursor SCF55.15%2C 279 aa%3B fasta scores: opt: 1425 z-score: 1618.9 E(): 0%3B 75.2%25 identity in 270 aa overlap. Contains Pfam match to entry PF01183 Glyco_hydro_25%2C Glycosyl hydrolases family 25 and 2x matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible N-terminal region signal peptide sequence (possibly cleavable);gbkey=CDS;gene=SCCB12.10c;product=hydrolase;protein_id=NP_629431.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5759595	5759930	.	-	.	ID=id6847;Dbxref=GeneID:1100727;Note=Pfam match to entry PF01183 Glyco_hydro_25%2C Glycosyl hydrolases family 25%2C score 104.90%2C E-value 1.5e-27;gbkey=misc_feature;gene=SCCB12.10c
NC_003888.3	RefSeq	sequence_feature	5759604	5759627	.	-	.	ID=id6848;Dbxref=GeneID:1100727;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCCB12.10c
NC_003888.3	RefSeq	sequence_feature	5759664	5759687	.	-	.	ID=id6849;Dbxref=GeneID:1100727;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCCB12.10c
NC_003888.3	RefSeq	ribosome_entry_site	5760141	5760145	.	-	.	ID=id6850;gbkey=RBS
NC_003888.3	RefSeq	gene	5760383	5760877	.	+	.	ID=gene5341;Dbxref=GeneID:1100728;Name=SCCB12.11;gbkey=Gene;gene=SCCB12.11;gene_biotype=protein_coding;gene_synonym=SCCB12.11;locus_tag=SCO5287
NC_003888.3	RefSeq	CDS	5760383	5760877	.	+	0	ID=cds5239;Parent=gene5341;Dbxref=Genbank:NP_629432.1,GeneID:1100728;Name=NP_629432.1;Note=SCCB12.11%2C possible MarR-family transcriptional regulator%2C len: 164 aa%3B similar to TR:Q9RL39 (EMBL: AL121596) Streptomyces coelicolor MarR-family protein SCF51.25%2C 148 aa%3B fasta scores: opt: 237 z-score: 290.2 E(): 1.1e-08%3B 37.6%25 identity in 141 aa overlap and to SW:YXAD_BACSU (EMBL:AB005554) Bacillus subtilis hypothetical transcriptional regulator on AsnH-GntR intergenic region YxaD%2C 143 aa%3B fasta scores: opt: 234 z-score: 286.9 E(): 1.6e-08%3B 35.7%25 identity in 140 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and possible helix-turn-helix motif at residues 72..93 (+3.73 SD);gbkey=CDS;gene=SCCB12.11;product=MarR family transcriptional regulator;protein_id=NP_629432.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5760545	5760856	.	+	.	ID=id6851;Dbxref=GeneID:1100728;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 99.30%2C E-value 7.3e-26;gbkey=misc_feature;gene=SCCB12.11
NC_003888.3	RefSeq	gene	5760899	5761690	.	-	.	ID=gene5342;Dbxref=GeneID:1100729;Name=SCCB12.12c;gbkey=Gene;gene=SCCB12.12c;gene_biotype=protein_coding;gene_synonym=SCCB12.12c;locus_tag=SCO5288
NC_003888.3	RefSeq	CDS	5760899	5761690	.	-	0	ID=cds5240;Parent=gene5342;Dbxref=Genbank:NP_629433.1,GeneID:1100729;Name=NP_629433.1;Note=SCCB12.12c%2C unknown%2C len: 263 aa;gbkey=CDS;gene=SCCB12.12c;product=hypothetical protein;protein_id=NP_629433.1;transl_table=11
NC_003888.3	RefSeq	gene	5762200	5765139	.	+	.	ID=gene5343;Dbxref=GeneID:1100730;Name=cvnA5;gbkey=Gene;gene=cvnA5;gene_biotype=protein_coding;gene_synonym=cvnA5,SC6G9.44c,SCCB12.13;locus_tag=SCO5289
NC_003888.3	RefSeq	CDS	5762200	5765139	.	+	0	ID=cds5241;Parent=gene5343;Dbxref=Genbank:NP_733660.1,GeneID:1100730;Name=NP_733660.1;Note=SCCB12.13%2C cvnA5%2C hypothetical protein (fragment)%2C len: >191 aa%3B similar to C-terminal region of TR:O86525 (EMBL:AL031124) Streptomyces coelicolor hypothetical 139.7 kDa protein SC1C2.25c%2C 1329 aa%3B fasta scores: opt: 146 z-score: 152.5 E(): 0.5%3B 25.3%25 identity in 186 aa overlap. Contains possible hydrophobic membrane spanning region~SC6G9.44c%2C possible sensor kinase%2C len: 806 aa%3B weak similarity to part of TR:O33492 (EMBL:AJ000330)%2C StyS%2C Pseudomonas sp. strain Y2 styrene sensor kinase (982 aa)%2C fasta scores%3B opt: 256 z-score: 230.5 E(): 1.6e-05%2C 24.7%25 identity in 543 aa overlap. Similar to parts of other S.coelicolor hypothetical proteins e.g. TR:O86525 (EMBL:AL031124) S.coelicolor hypothetical protein (1329 aa) (31.5%25 identity in 821 aa overlap). Contains 11x degenerate E(K/T)A repeats between codons 555 and 587. Contains probable coiled-coil from 251 to 295 (45 residues) (Max score: 1.500%2C probability 0.95). Contains Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins and to entry PF00512 signal%2C Signal carboxyl-terminal domain;gbkey=CDS;gene=cvnA5;product=two component sensor kinase;protein_id=NP_733660.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5763238	5763459	.	+	.	ID=id6852;Dbxref=GeneID:1100730;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 31.30%2C E-value 2.2e-05;gbkey=misc_feature;gene=cvnA5
NC_003888.3	RefSeq	sequence_feature	5763655	5764251	.	+	.	ID=id6853;Dbxref=GeneID:1100730;Note=Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 3.30%2C E-value 1.6e-05;gbkey=misc_feature;gene=cvnA5
NC_003888.3	RefSeq	repeat_region	5764381	5764478	.	+	.	ID=id6854;Dbxref=GeneID:1100730;Note=repeat 3%3B 11x degenerate 9 bp repeats;gbkey=repeat_region;gene=cvnA5
NC_003888.3	RefSeq	gene	5765214	5765666	.	+	.	ID=gene5344;Dbxref=GeneID:1100731;Name=cvnB5;gbkey=Gene;gene=cvnB5;gene_biotype=protein_coding;gene_synonym=cvnB5,SC6G9.43c;locus_tag=SCO5290
NC_003888.3	RefSeq	CDS	5765214	5765666	.	+	0	ID=cds5242;Parent=gene5344;Dbxref=Genbank:NP_629434.1,GeneID:1100731;Name=NP_629434.1;Note=SC6G9.43c%2C cvnB5%2C conserved hypothetical protein%2C len: 150 aa%3B similar to hypothetical proteins from S. coelicolor and Mycobacterium tuberculosis e.g. TR:O86524 (EMBL:AL031124) S.coelicolor hypothetical protein (173 aa)%2C fasta scores%3B opt: 316 z-score: 394.7 E(): 1.2e-14%2C 48.1%25 identity in 131 aa overlap and TR:O50393 (EMBL:AL009198) Mycobacterium tuberculosis hypothetical protein (130 aa) (36.7%25 identity in 120 aa overlap);gbkey=CDS;gene=cvnB5;product=hypothetical protein;protein_id=NP_629434.1;transl_table=11
NC_003888.3	RefSeq	gene	5765663	5766115	.	+	.	ID=gene5345;Dbxref=GeneID:1100732;Name=cvnC5;gbkey=Gene;gene=cvnC5;gene_biotype=protein_coding;gene_synonym=cvnC5,SC6G9.42c;locus_tag=SCO5291
NC_003888.3	RefSeq	CDS	5765663	5766115	.	+	0	ID=cds5243;Parent=gene5345;Dbxref=Genbank:NP_629435.1,GeneID:1100732;Name=NP_629435.1;Note=SC6G9.42c%2C cvnC5%2C conserved hypothetical protein%2C len: 150 aa%3B similar to hypothetical proteins of varying length (divergent at the N-terminus) from S. coelicolor and Mycobacterium tuberculosis e.g. TR:O86523 (EMBL:AL031124) S.coelicolor hypothetical protein (132 aa)%2C fasta scores%3B opt: 250 z-score: 312.1 E(): 4.7e-10%2C 43.7%25 identity in 135 aa overlap and TR:O50392 (EMBL:AL009198) Mycobacterium tuberculosis hypothetical protein (122 aa) (37.4%25 identity in 131 aa overlap);gbkey=CDS;gene=cvnC5;product=hypothetical protein;protein_id=NP_629435.1;transl_table=11
NC_003888.3	RefSeq	gene	5766162	5766737	.	+	.	ID=gene5346;Dbxref=GeneID:1100733;Name=cvnD5;gbkey=Gene;gene=cvnD5;gene_biotype=protein_coding;gene_synonym=cvnD5,SC6G9.41c;locus_tag=SCO5292
NC_003888.3	RefSeq	CDS	5766162	5766737	.	+	0	ID=cds5244;Parent=gene5346;Dbxref=Genbank:NP_629436.1,GeneID:1100733;Name=NP_629436.1;Note=SC6G9.41c%2C cvnD5%2C possible ATP/GTP-binding protein%2C len: 191 aa%3B highly similar to others from S.coelicolor e.g. TR:O86519 (EMBL:AL031124) S.coelicolor possible ATP/GTP-binding protein (174 aa)%2C fasta scores%3B opt: 766 z-score: 918.0 E(): 0%2C 68.0%25 identity in 169 aa overlap. Although many of the presumed homologues start at the equivalent of codon 18 in this CDS%2C there is no possible initiation codon in this case. Also similar to hypothetical proteins from other organisms e.g. TR:O5039 (EMBL:AL009198) Mycobacterium tuberculosis hypothetical protein (193 aa) (63.6%25 identity in 173 aa overlap). Similar to the C-terminal half of TR:O26694 (EMBL:AE00084) Methanobacterium thermoautotrophicum conserved protein (393 aa) (29.5%25 identity in 173 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=cvnD5;product=ATP/GTP-binding protein;protein_id=NP_629436.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5766222	5766245	.	+	.	ID=id6855;Dbxref=GeneID:1100733;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD5
NC_003888.3	RefSeq	gene	5766796	5768058	.	+	.	ID=gene5347;Dbxref=GeneID:1100734;Name=SC6G9.40c;gbkey=Gene;gene=SC6G9.40c;gene_biotype=protein_coding;gene_synonym=SC6G9.40c;locus_tag=SCO5293
NC_003888.3	RefSeq	CDS	5766796	5768058	.	+	0	ID=cds5245;Parent=gene5347;Dbxref=Genbank:NP_629437.1,GeneID:1100734;Name=NP_629437.1;Note=SC6G9.40c%2C possible oxygenase subunit%2C len: 420 aa%3B similar to Pseudomonas spp. styrene monoxygenase large subunits e.g. TR:O06834 (EMBL:Z92524)%2C styA%2C Pseudomonas fluorescens main component of styrene monooxygenase (415 aa)%2C fasta scores%3B opt: 481 z-score: 542.1 E(): 7.3e-23%2C 31.2%25 identity in 417 aa overlap. It has no neighbouring CDS similar to the monoxygenase small subunit. The C-terminus overlaps the C-terminus of the downstream ORF on the opposite strand;gbkey=CDS;gene=SC6G9.40c;product=oxygenase subunit;protein_id=NP_629437.1;transl_table=11
NC_003888.3	RefSeq	gene	5768022	5769197	.	-	.	ID=gene5348;Dbxref=GeneID:1100735;Name=SC6G9.39;gbkey=Gene;gene=SC6G9.39;gene_biotype=protein_coding;gene_synonym=SC6G9.39;locus_tag=SCO5294
NC_003888.3	RefSeq	CDS	5768022	5769197	.	-	0	ID=cds5246;Parent=gene5348;Dbxref=Genbank:NP_629438.1,GeneID:1100735;Name=NP_629438.1;Note=SC6G9.39%2C probable hypothetical protein%2C len: 391 aa%3B similar to mycobacterial hypothetical proteins e.g. TR:O69580 (EMBL:AL022602) Mycobacterium leprae probable hypothetical protein (374 aa)%2C fasta scores%3B opt: 347 z-score: 354.0 E(): 2.2e-12%2C 29.1%25 identity in 337 aa overlap. Similar to part of Listeria p60 attachment/invasion proteins e.g. SW:P60_LISWE (EMBL:M80354) Listeria welshimeri protein p60 precursor (524 aa) (37.8%25 identity in 98 aa overlap). Similar to other hypothetical proteins from S.coelicolor e.g. (EMBL:AL049497)%2C SC6G10.08C%2C S.coelicolor hypothetical protein (338 aa) (38.3%25 identity in 342 aa overlap). Contains possible N-terminal signal sequence. The C-terminus overlaps the C-terminus of the downstream ORF on the opposite strand. Contains probable coiled-coils from 43 to 98 (56 residues) ( Max score: 1.580%2C probability 0.99) and from 164 to 201 (38 residues) (Max score: 1.531%2C probability 0.97). Contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family (domain of unknown function);gbkey=CDS;gene=SC6G9.39;product=hypothetical protein;protein_id=NP_629438.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5768148	5768462	.	-	.	ID=id6856;Dbxref=GeneID:1100735;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 93.50%2C E-value 4.1e-24;gbkey=misc_feature;gene=SC6G9.39
NC_003888.3	RefSeq	gene	5769301	5769624	.	-	.	ID=gene5349;Dbxref=GeneID:1100736;Name=SC6G9.38;gbkey=Gene;gene=SC6G9.38;gene_biotype=protein_coding;gene_synonym=SC6G9.38;locus_tag=SCO5295
NC_003888.3	RefSeq	CDS	5769301	5769624	.	-	0	ID=cds5247;Parent=gene5349;Dbxref=Genbank:NP_629439.1,GeneID:1100736;Name=NP_629439.1;Note=SC6G9.38%2C hypothetical protein%2C len: 107 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SC6G9.38;product=hypothetical protein;protein_id=NP_629439.1;transl_table=11
NC_003888.3	RefSeq	gene	5769695	5770348	.	-	.	ID=gene5350;Dbxref=GeneID:1100737;Name=SC6G9.37;gbkey=Gene;gene=SC6G9.37;gene_biotype=protein_coding;gene_synonym=SC6G9.37;locus_tag=SCO5296
NC_003888.3	RefSeq	CDS	5769695	5770348	.	-	0	ID=cds5248;Parent=gene5350;Dbxref=Genbank:NP_629440.1,GeneID:1100737;Name=NP_629440.1;Note=SC6G9.37%2C possible tetR-family transcriptional regulator%2C len: 217 aa%3B similar to many hypothetical proteins%2C especially from mycobacteria e.g. TR:Q49662 (EMBL:U00012) Mycobacterium leprae hypothetical protein (242 aa)%2C fasta scores%3B opt: 216 z-score: 270.8 E(): 9.4e-08%2C 28.8%25 identity in 222 aa overlap. Weak similarity to some transcriptional regulators. Contains probable helix-turn-helix motif at aa 39-60 (Score 1937%2C +5.78 SD). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SC6G9.37;product=TetR family transcriptional regulator;protein_id=NP_629440.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5770142	5770285	.	-	.	ID=id6857;Dbxref=GeneID:1100737;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 27.50%2C E-value 7.2e-06;gbkey=misc_feature;gene=SC6G9.37
NC_003888.3	RefSeq	repeat_region	5770633	5771530	.	-	.	ID=id6858;Note=insertion element IS1650;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	5770633	5770653	.	+	.	ID=id6859;Note=20 bp imperfect inverted repeat (1 mismatch);gbkey=repeat_region
NC_003888.3	RefSeq	gene	5770657	5771510	.	+	.	ID=gene5351;Dbxref=GeneID:1100738;Name=SC6G9.35c;gbkey=Gene;gene=SC6G9.35c;gene_biotype=pseudogene;gene_synonym=SC6G9.35c,SC6G9.36c;locus_tag=SCO5297;pseudo=true
NC_003888.3	RefSeq	sequence_feature	5770657	5771510	.	+	.	ID=id6860;Dbxref=GeneID:1100738;Note=SC6G9.36c%2C probable transposase ORF1%2C len: 136 aa%3B similar to parts of many transposases e.g. TR:Q44424 (EMBL:M55562) Agrobacterium tumefaciens IS427 ORF 4 (137 aa)%2C fasta scores%3B opt: 334 z-score: 436.7 E(): 5.4e-17%2C 50.8%25 identity in 118 aa overlap. Similar to TR:O69927 (EMBL:AL02386) S.coelicolor IS1648 transposase (141 aa) (60.5%25 identity in 119 aa overlap). May be translated by frameshifting into the downstream ORF~SC6G9.35c%2C probable transposase ORF2%2C len: 148 aa%3B similar to parts of many transposases e.g. TR:Q46487 (EMBL:X75973) Clavibacter xyli insertion sequence IS1237 transposase (308 aa)%2C fasta scores%3B 42.1%25 identity in 171 aa overlap. Similar to part of TR:O69928 (EMBL:AL023861) S.coelicolor IS1648 transposase fragment (152 aa) (52.7%25 identity in 150 aa overlap). May be translated as a result of frameshifting from the upstream ORF%3Btransposase;gbkey=misc_feature;gene=SC6G9.35c
NC_003888.3	RefSeq	sequence_feature	5771013	5771018	.	+	.	ID=id6861;Dbxref=GeneID:1100738;Note=possible ribosomal frameshift site;gbkey=misc_feature;gene=SC6G9.35c
NC_003888.3	RefSeq	repeat_region	5771510	5771530	.	-	.	ID=id6862;Note=20 bp imperfect inverted repeat (1 mismatch);gbkey=repeat_region
NC_003888.3	RefSeq	gene	5771526	5772464	.	-	.	ID=gene5352;Dbxref=GeneID:1100739;Name=SC6G9.34;gbkey=Gene;gene=SC6G9.34;gene_biotype=protein_coding;gene_synonym=SC6G9.34;locus_tag=SCO5299
NC_003888.3	RefSeq	CDS	5771526	5772464	.	-	0	ID=cds5249;Parent=gene5352;Dbxref=Genbank:NP_629441.1,GeneID:1100739;Name=NP_629441.1;Note=SC6G9.34%2C possible membrane protein%2C len: 312 aa%3B unknown function%2C similar to proteins from Mycobacterium leprae and Mycobacterium tuberculosis e.g. TR:O33063 (EMBL:Z99494) Mycobacterium leprae hypothetical protein (341 aa)%2C fasta scores%3B opt: 316 z-score: 387.1 E(): 3.1e-14%2C 27.1%25 identity in 255 aa overlap (divergent at C-terminus). Contains hydrophobic%2C possible membrane-spanning region;gbkey=CDS;gene=SC6G9.34;product=hypothetical protein;protein_id=NP_629441.1;transl_table=11
NC_003888.3	RefSeq	gene	5772612	5773118	.	-	.	ID=gene5353;Dbxref=GeneID:1100740;Name=SC6G9.33;gbkey=Gene;gene=SC6G9.33;gene_biotype=protein_coding;gene_synonym=SC6G9.33;locus_tag=SCO5300
NC_003888.3	RefSeq	CDS	5772612	5773118	.	-	0	ID=cds5250;Parent=gene5353;Dbxref=Genbank:NP_629442.1,GeneID:1100740;Name=NP_629442.1;Note=SC6G9.33%2C hypothetical protein%2C len: 168 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Alternative start codon present at codon 6. Similar to TR:Q9A5F4 (EMBL:AE005918) Caulobacter crescentus hypothetical protein CC2496%2C 185 aa%3B fasta scores: opt: 573 Z-score: 686.8 E(): 1.3e-30%3B 52.532%25 identity in 158 aa overlap;gbkey=CDS;gene=SC6G9.33;product=hypothetical protein;protein_id=NP_629442.1;transl_table=11
NC_003888.3	RefSeq	gene	5773164	5774621	.	-	.	ID=gene5354;Dbxref=GeneID:1100741;Name=SC6G9.32;gbkey=Gene;gene=SC6G9.32;gene_biotype=protein_coding;gene_synonym=SC6G9.32;locus_tag=SCO5301
NC_003888.3	RefSeq	CDS	5773164	5774621	.	-	0	ID=cds5251;Parent=gene5354;Dbxref=Genbank:NP_629443.1,GeneID:1100741;Name=NP_629443.1;Note=SC6G9.32%2C possible  penicillin-binding protein%2C len: 485 aa%3B similar to many e.g. to the C-terminal end of SW:PBPC_BACSU (EMBL:D38161)%2C PbpC%2C Bacillus subtilis penicillin-binding protein 3 (668 aa)%2C fasta scores%3B opt: 422 z-score: 451.6 E(): 8e-18%2C 27.6%25 identity in 384 aa overlap. Similar to penicillin-binding proteins from mycobacteria e.g. TR:P71586 (EMBL:Z80233) Mycobacterium tuberculosis PpbA homologue (491 aa) (42.8%25 identity in 495 aa overlap). Contains a hydrophobic%2C possible membrane anchor at the N-terminus. Contains Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC6G9.32;product=penicillin-binding protein;protein_id=NP_629443.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5773191	5774204	.	-	.	ID=id6863;Dbxref=GeneID:1100741;Note=Pfam match to entry PF00905 Transpeptidase%2C Penicillin binding protein transpeptidase domain%2C score 249.30%2C E-value 5.5e-71;gbkey=misc_feature;gene=SC6G9.32
NC_003888.3	RefSeq	sequence_feature	5773368	5773391	.	-	.	ID=id6864;Dbxref=GeneID:1100741;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6G9.32
NC_003888.3	RefSeq	gene	5774638	5775978	.	-	.	ID=gene5355;Dbxref=GeneID:1100742;Name=SC6G9.31;gbkey=Gene;gene=SC6G9.31;gene_biotype=protein_coding;gene_synonym=SC6G9.31;locus_tag=SCO5302
NC_003888.3	RefSeq	CDS	5774638	5775978	.	-	0	ID=cds5252;Parent=gene5355;Dbxref=Genbank:NP_629444.1,GeneID:1100742;Name=NP_629444.1;Note=SC6G9.31%2C probable integral membrane cell-cycle protein%2C len: 446 aa%3B similar to members of the ftsW (Escherichia coli cell division)/rodA (Escherichia coli cell shape)/spoVE (Bacillus subtilis spore formation) family e.g. SW:SP5E_BACSU (EMBL:X51419)%2C spoVE%2C Bacillus subtilis stage V sporulation protein E (366 aa)%2C fasta scores%3B opt: 461 z-score: 525.9 E(): 5.8e-22%2C 33.4%25 identity in 371 aa overlap. Highly similar to proteins from mycobacteria e.g. TR:FTSW_MYCLE (EMBL:Z70722)%2C ftsW%2C Mycobacterium leprae probable cell division protein (465 aa) (46.5%25 identity in 430 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein;gbkey=CDS;gene=SC6G9.31;product=integral membrane cell-cycle protein;protein_id=NP_629444.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5774665	5775753	.	-	.	ID=id6865;Dbxref=GeneID:1100742;Note=Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein%2C score 266.90%2C E-value 2.6e-76;gbkey=misc_feature;gene=SC6G9.31
NC_003888.3	RefSeq	gene	5776055	5776522	.	-	.	ID=gene5356;Dbxref=GeneID:1100743;Name=SC6G9.30;gbkey=Gene;gene=SC6G9.30;gene_biotype=protein_coding;gene_synonym=SC6G9.30;locus_tag=SCO5303
NC_003888.3	RefSeq	CDS	5776055	5776522	.	-	0	ID=cds5253;Parent=gene5356;Dbxref=Genbank:NP_629445.1,GeneID:1100743;Name=NP_629445.1;Note=SC6G9.30%2C possible membrane protein%2C len: 155 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains hydrophobic%2C possible membrane-spanning region near the N-terminus;gbkey=CDS;gene=SC6G9.30;product=hypothetical protein;protein_id=NP_629445.1;transl_table=11
NC_003888.3	RefSeq	gene	5776630	5777874	.	-	.	ID=gene5357;Dbxref=GeneID:1100744;Name=SC6G9.29;gbkey=Gene;gene=SC6G9.29;gene_biotype=protein_coding;gene_synonym=SC6G9.29;locus_tag=SCO5304
NC_003888.3	RefSeq	CDS	5776630	5777874	.	-	0	ID=cds5254;Parent=gene5357;Dbxref=Genbank:NP_629446.1,GeneID:1100744;Name=NP_629446.1;Note=SC6G9.29%2C possible sensor-like histidine kinase%2C len: 414 aa%3B similar to many sensor histidine kinases from two-component systems e.g. (EMBL:AJ13121)%2C CseC%2C S.coelicolor sensory histidine kinase of two-component system regulating sigE transcription (507 aa)%2C fasta scores%3B opt: 966 z-score: 1051.7 E(): 0%2C 44.3%25 identity in 429 aa overlap. This protein does not have an obvious response regulator companion. Similar to part of another lone sensor-like histidine kinase TR:O05890 (EMBL:Z95121)%2C Mycobacterium tuberculosis sensor-like histidine kinase (567 aa) (33.8%25 identity in 397 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam matches to entry PF00672 DUF5%2C Domain found in bacterial signal proteins and to entry PF00512 signal%2C Signal carboxyl-terminal domain. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6G9.29;product=sensor-like histidine kinase;protein_id=NP_629446.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5776642	5777196	.	-	.	ID=id6866;Dbxref=GeneID:1100744;Note=Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 90.80%2C E-value 2.8e-23;gbkey=misc_feature;gene=SC6G9.29
NC_003888.3	RefSeq	sequence_feature	5777236	5777466	.	-	.	ID=id6867;Dbxref=GeneID:1100744;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 44.70%2C E-value 2.1e-09;gbkey=misc_feature;gene=SC6G9.29
NC_003888.3	RefSeq	gene	5777871	5778689	.	-	.	ID=gene5358;Dbxref=GeneID:1100745;Name=SC6G9.28;gbkey=Gene;gene=SC6G9.28;gene_biotype=protein_coding;gene_synonym=SC6G9.28;locus_tag=SCO5305
NC_003888.3	RefSeq	CDS	5777871	5778689	.	-	0	ID=cds5255;Parent=gene5358;Dbxref=Genbank:NP_629447.1,GeneID:1100745;Name=NP_629447.1;Note=SC6G9.28%2C possible lipoprotein%2C len: 272 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC6G9.28;product=lipoprotein;protein_id=NP_629447.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5778597	5778629	.	-	.	ID=id6868;Dbxref=GeneID:1100745;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6G9.28
NC_003888.3	RefSeq	gene	5778817	5779296	.	-	.	ID=gene5359;Dbxref=GeneID:1100746;Name=SC6G9.27;gbkey=Gene;gene=SC6G9.27;gene_biotype=protein_coding;gene_synonym=SC6G9.27;locus_tag=SCO5306
NC_003888.3	RefSeq	CDS	5778817	5779296	.	-	0	ID=cds5256;Parent=gene5359;Dbxref=Genbank:NP_629448.1,GeneID:1100746;Name=NP_629448.1;Note=SC6G9.27%2C possible protein phosphatase%2C len: 159 aa%3B very weak similarity to eukaryotic tyrosine and dual-specificity protein phosphatases e.g. TR:O70275 (EMBL:AF035645) Mus musculus protein tyrosine phosphatase 4A3 (173 aa)%2C fasta scores%3B opt: 130 z-score: 173.4 E(): 0.025%2C 33.3%25 identity in 78 aa overlap. Alternative start codons are present at codons 12 and 17. Contains Pfam match to entry PF00782 DSPc%2C Dual specificity phosphatase%2C catalytic domain;gbkey=CDS;gene=SC6G9.27;product=protein phosphatase;protein_id=NP_629448.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5778862	5779278	.	-	.	ID=id6869;Dbxref=GeneID:1100746;Note=Pfam match to entry PF00782 DSPc%2C Dual specificity phosphatase%2C catalytic domain%2C score -10.00%2C E-value 0.0075;gbkey=misc_feature;gene=SC6G9.27
NC_003888.3	RefSeq	gene	5779410	5780234	.	+	.	ID=gene5360;Dbxref=GeneID:1100747;Name=SC6G9.26c;gbkey=Gene;gene=SC6G9.26c;gene_biotype=protein_coding;gene_synonym=SC6G9.26c;locus_tag=SCO5307
NC_003888.3	RefSeq	CDS	5779410	5780234	.	+	0	ID=cds5257;Parent=gene5360;Dbxref=Genbank:NP_629449.1,GeneID:1100747;Name=NP_629449.1;Note=SC6G9.26c%2C hypothetical protein%2C len: 274 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Alternative start codons are present at codons 8 and 14;gbkey=CDS;gene=SC6G9.26c;product=hypothetical protein;protein_id=NP_629449.1;transl_table=11
NC_003888.3	RefSeq	gene	5780326	5781207	.	-	.	ID=gene5361;Dbxref=GeneID:1100748;Name=SC6G9.25;gbkey=Gene;gene=SC6G9.25;gene_biotype=protein_coding;gene_synonym=SC6G9.25;locus_tag=SCO5308
NC_003888.3	RefSeq	CDS	5780326	5781207	.	-	0	ID=cds5258;Parent=gene5361;Dbxref=Genbank:NP_629450.1,GeneID:1100748;Name=NP_629450.1;Note=SC6G9.25%2C conserved hypothetical protein%2C len: 293 aa%3B unknown function%2C similar to the N-terminal ends of hypothetical proteins from Mycobacterium tuberculosis e.g. TR:P95226 (EMBL:Z86089) Mycobacterium tuberculosis hypothetical protein (397 aa)%2C fasta scores%3B opt: 534 z-score: 643.4 E(): 1.7e-28%2C 36.6%25 identity in 292 aa overlap and to the C-terminal end of TR:O34398 (EMBL:Z99110) Bacillus subtilis hypothetical protein (611 aa) (29.8%25 identity in 282 aa overlap). Also similar to S. coelicolor hypothetical protein SC4C6.19 (341 aa) (34.6%25 identity in 295 aa overlap) and (EMBL:AL033505)%2C SC1E6.07%2C S.coelicolor hypothetical protein (319 aa) (32.8%25 identity in 259 aa overlap). Alternative start codons are present at codons 4%2C 7%2C 12 and 20;gbkey=CDS;gene=SC6G9.25;product=hypothetical protein;protein_id=NP_629450.1;transl_table=11
NC_003888.3	RefSeq	gene	5781254	5782351	.	+	.	ID=gene5362;Dbxref=GeneID:1100749;Name=SC6G9.24c;gbkey=Gene;gene=SC6G9.24c;gene_biotype=protein_coding;gene_synonym=SC6G9.24c;locus_tag=SCO5309
NC_003888.3	RefSeq	CDS	5781254	5782351	.	+	0	ID=cds5259;Parent=gene5362;Dbxref=Genbank:NP_629451.1,GeneID:1100749;Name=NP_629451.1;Note=SC6G9.24c%2C conserved hypothetical protein%2C len: 365 aa%3B unknown function%2C similar to hypothetical proteins from Mycobacterium tuberculosis%2C Bacillus subtilis and Archaeoglobus fulgidus e.g. TR:O05866 (EMBL:Z95209) Mycobacterium tuberculosis hypothetical protein (273 aa)%2C fasta scores%3B opt: 648 z-score: 651.9 E(): 5.6e-29%2C 36.5%25 identity in 274 aa overlap. An alternative start codon is present as codon 4;gbkey=CDS;gene=SC6G9.24c;product=hypothetical protein;protein_id=NP_629451.1;transl_table=11
NC_003888.3	RefSeq	gene	5782374	5782937	.	-	.	ID=gene5363;Dbxref=GeneID:1100750;Name=SC6G9.23;gbkey=Gene;gene=SC6G9.23;gene_biotype=protein_coding;gene_synonym=SC6G9.23;locus_tag=SCO5310
NC_003888.3	RefSeq	CDS	5782374	5782937	.	-	0	ID=cds5260;Parent=gene5363;Dbxref=Genbank:NP_629452.1,GeneID:1100750;Name=NP_629452.1;Note=SC6G9.23%2C hypothetical protein%2C len: 187 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference%2C amino acid composition and the presence of a possible RBS;gbkey=CDS;gene=SC6G9.23;product=hypothetical protein;protein_id=NP_629452.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5782947	5782952	.	-	.	ID=id6870;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	5783226	5783972	.	-	.	ID=gene5364;Dbxref=GeneID:1100751;Name=SC6G9.22;gbkey=Gene;gene=SC6G9.22;gene_biotype=protein_coding;gene_synonym=SC6G9.22;locus_tag=SCO5311
NC_003888.3	RefSeq	CDS	5783226	5783972	.	-	0	ID=cds5261;Parent=gene5364;Dbxref=Genbank:NP_629453.1,GeneID:1100751;Name=NP_629453.1;Note=SC6G9.22%2C possible hypothetical protein%2C len: 248 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC6G9.22;product=hypothetical protein;protein_id=NP_629453.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5783977	5783981	.	-	.	ID=id6871;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	5784136	5784570	.	-	.	ID=gene5365;Dbxref=GeneID:1100752;Name=SC6G9.21;gbkey=Gene;gene=SC6G9.21;gene_biotype=protein_coding;gene_synonym=SC6G9.21;locus_tag=SCO5312
NC_003888.3	RefSeq	CDS	5784136	5784570	.	-	0	ID=cds5262;Parent=gene5365;Dbxref=Genbank:NP_629454.1,GeneID:1100752;Name=NP_629454.1;Note=SC6G9.21%2C conserved hypothetical protein%2C len: 144 aa%3B unknown function%2C similar to hypothetical proteins from Mycobacterium tuberculosis e.g. TR:O06553 (EMBL:Z95584) Mycobacterium tuberculosis hypothetical protein (147 aa)%2C fasta scores%3B opt: 478 z-score: 561.4 E(): 6.1e-24%2C 55.7%25 identity in 140 aa overlap;gbkey=CDS;gene=SC6G9.21;product=hypothetical protein;protein_id=NP_629454.1;transl_table=11
NC_003888.3	RefSeq	gene	5784597	5785508	.	-	.	ID=gene5366;Dbxref=GeneID:1100753;Name=SC6G9.20;gbkey=Gene;gene=SC6G9.20;gene_biotype=protein_coding;gene_synonym=SC6G9.20;locus_tag=SCO5313
NC_003888.3	RefSeq	CDS	5784597	5785508	.	-	0	ID=cds5263;Parent=gene5366;Dbxref=Genbank:NP_629455.1,GeneID:1100753;Name=NP_629455.1;Note=SC6G9.20%2C possible membrane protein%2C len: 303 aa%3B unknown function%2C C-terminal half shows weak similarity to the corresponding region of TR:O05859 (EMBL:Z95120) Mycobacterium tuberculosis hypothetical protein (285 aa)%2C fasta scores%3B opt: 285 z-score: 275.6 E(): 5e-08%2C 31.4%25 identity in 277 aa overlap. Contains a hydrophobic%2C possible membrane-spanning region near the N-terminus. Contains PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=CDS;gene=SC6G9.20;product=hypothetical protein;protein_id=NP_629455.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5784741	5784770	.	-	.	ID=id6872;Dbxref=GeneID:1100753;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC6G9.20
NC_003888.3	RefSeq	ribosome_entry_site	5785518	5785521	.	-	.	ID=id6873;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	5785732	5791484	.	-	.	ID=id6874;Note=sequence corresponding to EMBL:X55942%2C S. coelicolor whiE locus DNA;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5785753	5786088	.	-	.	ID=gene5367;Dbxref=GeneID:1100754;Name=SC6G9.19;gbkey=Gene;gene=SC6G9.19;gene_biotype=protein_coding;gene_synonym=SC6G9.19;locus_tag=SCO5314
NC_003888.3	RefSeq	CDS	5785753	5786088	.	-	0	ID=cds5264;Parent=gene5367;Dbxref=Genbank:NP_629456.1,GeneID:1100754;Name=NP_629456.1;Note=SC6G9.19%2C whiE ORF VII%2C len: 111 aa%3B unknown function%2C whiE locus protein previously sequenced from S. coelicolor as SW:YW12_STRCO (EMBL:X55942);gbkey=CDS;gene=SC6G9.19;product=whiE protein VII;protein_id=NP_629456.1;transl_table=11
NC_003888.3	RefSeq	gene	5786122	5786601	.	-	.	ID=gene5368;Dbxref=GeneID:1100755;Name=SC6G9.18;gbkey=Gene;gene=SC6G9.18;gene_biotype=protein_coding;gene_synonym=SC6G9.18;locus_tag=SCO5315
NC_003888.3	RefSeq	CDS	5786122	5786601	.	-	0	ID=cds5265;Parent=gene5368;Dbxref=Genbank:NP_629457.1,GeneID:1100755;Name=NP_629457.1;Note=SC6G9.18%2C polyketide cyclase%2C len: 159 aa%3B whiE locus polyketide cyclase previously sequenced from S. coelicolor as SW:CYPC_STRCO (EMBL:X55942);gbkey=CDS;gene=SC6G9.18;product=polyketide cyclase;protein_id=NP_629457.1;transl_table=11
NC_003888.3	RefSeq	gene	5786603	5786875	.	-	.	ID=gene5369;Dbxref=GeneID:1100756;Name=SC6G9.17;gbkey=Gene;gene=SC6G9.17;gene_biotype=protein_coding;gene_synonym=SC6G9.17;locus_tag=SCO5316
NC_003888.3	RefSeq	CDS	5786603	5786875	.	-	0	ID=cds5266;Parent=gene5369;Dbxref=Genbank:NP_629458.1,GeneID:1100756;Name=NP_629458.1;Note=SC6G9.17%2C acyl carrier protein%2C len 90 aa%3B whiE locus acyl carrier protein previously sequenced from S.coelicolor as SW:ACP_STRCO (EMBL:X55942). Contains Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site and PS00012 Phosphopantetheine attachment site;gbkey=CDS;gene=SC6G9.17;product=acyl carrier protein;protein_id=NP_629458.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5786630	5786839	.	-	.	ID=id6875;Dbxref=GeneID:1100756;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 44.90%2C E-value 8.6e-11;gbkey=misc_feature;gene=SC6G9.17
NC_003888.3	RefSeq	sequence_feature	5786705	5786752	.	-	.	ID=id6876;Dbxref=GeneID:1100756;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC6G9.17
NC_003888.3	RefSeq	gene	5786945	5788219	.	-	.	ID=gene5370;Dbxref=GeneID:1100757;Name=SC6G9.16;gbkey=Gene;gene=SC6G9.16;gene_biotype=protein_coding;gene_synonym=SC6G9.16;locus_tag=SCO5317
NC_003888.3	RefSeq	CDS	5786945	5788219	.	-	0	ID=cds5267;Parent=gene5370;Dbxref=Genbank:NP_629459.1,GeneID:1100757;Name=NP_629459.1;Note=SC6G9.16%2C polyketide beta-ketoacyl synthase beta%2C len: 424 aa%3B whiE locus polyketide beta-ketoacyl synthase beta previously sequenced from S. coelicolor as SW:KAS2_STRCO (EMBL:X55942). May form heterodimer with SW:KAS1_STRCO%2C SC6G9.15 in beta-ketoacyl synthase beta-ketoacyl synthase alpha. Similar to others from S.coelicolor e.g. TR:O54149 (EMBL:AL021409) probable 3-oxoacyl-[acyl-carrier-protein] synthase (407 aa) (34.6%25 identity in 405 aa overlap). Contains Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase;gbkey=CDS;gene=SC6G9.16;product=polyketide beta-ketoacyl synthase beta;protein_id=NP_629459.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5786969	5788174	.	-	.	ID=id6877;Dbxref=GeneID:1100757;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score -20.00%2C E-value 4.9e-11;gbkey=misc_feature;gene=SC6G9.16
NC_003888.3	RefSeq	gene	5788216	5789487	.	-	.	ID=gene5371;Dbxref=GeneID:1100758;Name=SC6G9.15;gbkey=Gene;gene=SC6G9.15;gene_biotype=protein_coding;gene_synonym=SC6G9.15;locus_tag=SCO5318
NC_003888.3	RefSeq	CDS	5788216	5789487	.	-	0	ID=cds5268;Parent=gene5371;Dbxref=Genbank:NP_629460.1,GeneID:1100758;Name=NP_629460.1;Note=SC6G9.15%2C polyketide beta-ketoacyl synthase alpha%2C len: 423 aa%3B whiE locus polyketide beta-ketoacyl synthase alpha previously sequenced from S. coelicolor as SW:KAS1_STRCO (EMBL:X55942). May form heterodimer with SW:KAS2_STRCO%2C SC6G9.16 beta-ketoacyl synthase beta. Similar to others from S.coelicolor e.g. TR:O54149 (EMBL:AL021409) probable 3-oxoacyl-[acyl-carrier-protein] synthase (407 aa) (39.1%25 identity in 419 aa overlap). Contains Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase and PS00606 Beta-ketoacyl synthases active site;gbkey=CDS;gene=SC6G9.15;product=polyketide beta-ketoacyl synthase alpha;protein_id=NP_629460.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5788231	5789472	.	-	.	ID=id6878;Dbxref=GeneID:1100758;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 589.00%2C E-value 2.8e-173;gbkey=misc_feature;gene=SC6G9.15
NC_003888.3	RefSeq	sequence_feature	5788957	5789007	.	-	.	ID=id6879;Dbxref=GeneID:1100758;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=SC6G9.15
NC_003888.3	RefSeq	gene	5789484	5789957	.	-	.	ID=gene5372;Dbxref=GeneID:1100759;Name=SC6G9.14;gbkey=Gene;gene=SC6G9.14;gene_biotype=protein_coding;gene_synonym=SC6G9.14;locus_tag=SCO5319
NC_003888.3	RefSeq	CDS	5789484	5789957	.	-	0	ID=cds5269;Parent=gene5372;Dbxref=Genbank:NP_629461.1,GeneID:1100759;Name=NP_629461.1;Note=SC6G9.14%2C whiE ORF II%2C len: 157 aa%3B unknown function%2C whiE locus protein previously sequenced from S. coelicolor as SW:WH16_STRCO (EMBL:X55942);gbkey=CDS;gene=SC6G9.14;product=whiE protein II;protein_id=NP_629461.1;transl_table=11
NC_003888.3	RefSeq	gene	5790104	5791297	.	-	.	ID=gene5373;Dbxref=GeneID:1100760;Name=SC6G9.13;gbkey=Gene;gene=SC6G9.13;gene_biotype=protein_coding;gene_synonym=SC6G9.13;locus_tag=SCO5320
NC_003888.3	RefSeq	CDS	5790104	5791297	.	-	0	ID=cds5270;Parent=gene5373;Dbxref=Genbank:NP_629462.1,GeneID:1100760;Name=NP_629462.1;Note=SC6G9.13%2C whiE ORF I%2C len: 397 aa%3B unknown function%2C whiE locus protein previously sequenced from S. coelicolor as SW:WH42_STRCO (EMBL:X55942);gbkey=CDS;gene=SC6G9.13;product=whiE protein I;protein_id=NP_629462.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5791490	5792407	.	+	.	ID=id6880;Note=sequence corresponding to EMBL:X74213%2C S.coelicolor gene for aromatic hydroxylase;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5791629	5791633	.	+	.	ID=id6881;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	5791641	5793524	.	+	.	ID=gene5374;Dbxref=GeneID:1100761;Name=SC6G9.12c;gbkey=Gene;gene=SC6G9.12c;gene_biotype=protein_coding;gene_synonym=SC6G9.12c;locus_tag=SCO5321
NC_003888.3	RefSeq	CDS	5791641	5793524	.	+	0	ID=cds5271;Parent=gene5374;Dbxref=Genbank:NP_629463.1,GeneID:1100761;Name=NP_629463.1;Note=SC6G9.12c%2C polyketide hydroxylase%2C len: 627 aa%3B previously partially sequenced from S.coelicolor as SW:HYDL_STRCO (EMBL:X74213). Highly similar to SW:HYDL_STRHA (EMBL:L05390)%2C schC%2C Streptomyces halstedii polyketide hydroxylase involved in synthesis of a polyketide spore pigment (555 aa)%2C fasta scores%3B opt: 2290 z-score: 1755.0 E(): 0%2C 69.2%25 identity in 629 aa overlap. Also similar to many hydroxylases of substitued aromatic compounds. A notable difference between this sequence and its Streptomyces halstedii homologue is the presence of 12x GGP repeats starting at aa 413. Weakly similar to TR:O50491 (EMBL:AL020958) S.coelicolor possible monooxygenase (541 aa) (29.2%25 identity in 583 aa overlap). This feature is also absent from the other related hydroxylases. Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC6G9.12c;product=polyketide hydroxylase;protein_id=NP_629463.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5792181	5792774	.	+	.	ID=id6882;Dbxref=GeneID:1100761;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 233.10%2C E-value 3.9e-66;gbkey=misc_feature;gene=SC6G9.12c
NC_003888.3	RefSeq	repeat_region	5792877	5792984	.	+	.	ID=id6883;Dbxref=GeneID:1100761;Note=repeat 2%3B 12x degenerate 12 bp repeats;gbkey=repeat_region;gene=SC6G9.12c
NC_003888.3	RefSeq	gene	5793601	5794470	.	+	.	ID=gene5375;Dbxref=GeneID:1100762;Name=SC6G9.11c;gbkey=Gene;gene=SC6G9.11c;gene_biotype=protein_coding;gene_synonym=SC6G9.11c;locus_tag=SCO5322
NC_003888.3	RefSeq	CDS	5793601	5794470	.	+	0	ID=cds5272;Parent=gene5375;Dbxref=Genbank:NP_629464.1,GeneID:1100762;Name=NP_629464.1;Note=SC6G9.11c%2C conserved hypothetical protein%2C len: 289 aa%3B unknown function%2C similar to TR:O53410 (EMBL:AL021897) Mycobacterium tuberculosis hypothetical protein (285 aa)%2C fasta scores%3B opt: 556 z-score: 639.1 E(): 2.9e-28%2C 38.8%25 identity in 286 aa overlap;gbkey=CDS;gene=SC6G9.11c;product=hypothetical protein;protein_id=NP_629464.1;transl_table=11
NC_003888.3	RefSeq	gene	5794528	5795022	.	-	.	ID=gene5376;Dbxref=GeneID:1100763;Name=SC6G9.10;gbkey=Gene;gene=SC6G9.10;gene_biotype=protein_coding;gene_synonym=SC6G9.10;locus_tag=SCO5323
NC_003888.3	RefSeq	CDS	5794528	5795022	.	-	0	ID=cds5273;Parent=gene5376;Dbxref=Genbank:NP_629465.1,GeneID:1100763;Name=NP_629465.1;Note=SC6G9.10%2C probable Asn-C family transcriptional regulator%2C len: 164 aa%3B similar to many e.g. TR:P94329 (EMBL:U85623)%2C Lrp%2C Bradyrhizobium japonicum leucine-responsive regulatory protein (153 aa)%2C fasta scores%3B opt: 211 z-score: 261.3 E(): 3.2e-07%2C 30.8%25 identity in 143 aa overlap. Similar to others from S.coelicolor e.g. (EMBL:AL049628)%2C SCE94.12c%2C LrpA%2C probable AsnC-family transcriptional regulator (150 aa) (28.0%25 identity in 150 aa overlap). Contains probable helix-turn-helix motif at aa 24-45 (Score 1012%2C +2.63 SD). Contains Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family;gbkey=CDS;gene=SC6G9.10;product=transcription regulator AsnC;protein_id=NP_629465.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5794636	5794935	.	-	.	ID=id6884;Dbxref=GeneID:1100763;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 29.60%2C E-value 1.8e-06;gbkey=misc_feature;gene=SC6G9.10
NC_003888.3	RefSeq	ribosome_entry_site	5795145	5795150	.	+	.	ID=id6885;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	5795157	5795837	.	+	.	ID=gene5377;Dbxref=GeneID:1100764;Name=SC6G9.09c;gbkey=Gene;gene=SC6G9.09c;gene_biotype=protein_coding;gene_synonym=SC6G9.09c;locus_tag=SCO5324
NC_003888.3	RefSeq	CDS	5795157	5795837	.	+	0	ID=cds5274;Parent=gene5377;Dbxref=Genbank:NP_629466.1,GeneID:1100764;Name=NP_629466.1;Note=SC6G9.09c%2C possible oxidoreductase%2C len: 226 aa%3B weak similarity to SW:NOX_THETH (EMBL:X60110) Thermus aquaticus NADH dehydrogenase (205 aa)%2C fasta scores%3B opt: 159 z-score: 201.0 E(): 0.00073%2C 26.7%25 identity in 191 aa overlap. Similar to TR:O75989 (EMBL:AL031010) Homo sapiens hypothetical protein (184 aa) (40.0%25 identity in 185 aa overlap) and to part of SW:YKH5_CAEEL (EMBL:L23649) Caenorhabditis elegans hypothetical protein (359 aa) (28.6%25 identity in 185 aa overlap). Weak similarity to SW:NOX_THETH (EMBL:X60110) Thermus aquaticus NADH dehydrogenase (205 aa) (26.7%25 identity in 191 aa overlap). Contains Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family;gbkey=CDS;gene=SC6G9.09c;product=oxidoreductase;protein_id=NP_629466.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5795235	5795723	.	+	.	ID=id6886;Dbxref=GeneID:1100764;Note=Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family%2C score 20.60%2C E-value 0.00026;gbkey=misc_feature;gene=SC6G9.09c
NC_003888.3	RefSeq	gene	5796053	5796373	.	+	.	ID=gene5378;Dbxref=GeneID:1100765;Name=SC6G9.08c;gbkey=Gene;gene=SC6G9.08c;gene_biotype=protein_coding;gene_synonym=SC6G9.08c;locus_tag=SCO5325
NC_003888.3	RefSeq	CDS	5796053	5796373	.	+	0	ID=cds5275;Parent=gene5378;Dbxref=Genbank:NP_629467.1,GeneID:1100765;Name=NP_629467.1;Note=SC6G9.08c%2C hypothetical protein%2C len: 106 aa%3B unknown function%2C improbable CD suggested by GC frameplot. C-terminus is proline-rich and overlaps with hypothetical CDS on opposite strand;gbkey=CDS;gene=SC6G9.08c;product=hypothetical protein;protein_id=NP_629467.1;transl_table=11
NC_003888.3	RefSeq	gene	5796324	5796578	.	-	.	ID=gene5379;Dbxref=GeneID:1100766;Name=SC6G9.07;gbkey=Gene;gene=SC6G9.07;gene_biotype=protein_coding;gene_synonym=SC6G9.07;locus_tag=SCO5326
NC_003888.3	RefSeq	CDS	5796324	5796578	.	-	0	ID=cds5276;Parent=gene5379;Dbxref=Genbank:NP_629468.1,GeneID:1100766;Name=NP_629468.1;Note=SC6G9.07%2C hypothetical protein%2C len: 54 aa%3B unknown function%2C possible CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Similar to part of (EMBL:AL049573)%2C SCE39.23%2C S.coelicolor hypothetical protein (88 aa)%2C fasta scores%3B opt: 165 z-score: 222.7 E(): 4.4e-05%2C 46.7%25 identity in 60 aa overlap. C-terminus overlaps with hypothetical CDS on opposite strand;gbkey=CDS;gene=SC6G9.07;product=hypothetical protein;protein_id=NP_629468.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5796551	5807050	.	-	.	ID=id6887;Note=region of low %25G+C content (average 61%25);gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	5796614	5797488	.	+	.	ID=id6888;Note=repeat 1%3B insertion element IS1651%2C 875 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	5796614	5796635	.	+	.	ID=id6889;Note=degenerate 22 bp inverted repeat (6 mismatches);gbkey=repeat_region
NC_003888.3	RefSeq	gene	5796736	5797479	.	+	.	ID=gene5380;Dbxref=GeneID:1100767;Name=SC6G9.06c;gbkey=Gene;gene=SC6G9.06c;gene_biotype=protein_coding;gene_synonym=SC6G9.06c;locus_tag=SCO5327
NC_003888.3	RefSeq	CDS	5796736	5797479	.	+	0	ID=cds5277;Parent=gene5380;Dbxref=Genbank:NP_629469.1,GeneID:1100767;Name=NP_629469.1;Note=SC6G9.06c%2C possible transposase%2C len: 247 aa%3B similar to TR:Q48342 (EMBL:M28508) Streptomyces lividans ORFA from insertion element IS493 (254 aa)%2C fasta scores%3B opt: 585 z-score: 725.3 E(): 4.5e-33%2C 45.0%25 identity in 220 aa overlap. Contains probable helix-turn-helix motif at aa 49-70 (Score 1540%2C +4.43 SD);gbkey=CDS;gene=SC6G9.06c;product=transposase;protein_id=NP_629469.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	5797467	5797488	.	-	.	ID=id6890;Note=degenerate 22 bp inverted repeat (6 mismatches);gbkey=repeat_region
NC_003888.3	RefSeq	gene	5797608	5797677	.	-	.	ID=gene5381;Dbxref=GeneID:3240057;Name=SCOt54;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt54
NC_003888.3	RefSeq	tRNA	5797608	5797677	.	-	.	ID=rna71;Parent=gene5381;Dbxref=GeneID:3240057;Note=tRNA Pseudo anticodon CCG%2C Cove score 20.64;gbkey=tRNA;product=tRNA-OTHER
NC_003888.3	RefSeq	exon	5797608	5797677	.	-	.	ID=id6891;Parent=rna71;Dbxref=GeneID:3240057;Note=tRNA Pseudo anticodon CCG%2C Cove score 20.64;gbkey=tRNA;product=tRNA-OTHER
NC_003888.3	RefSeq	repeat_region	5797817	5798691	.	-	.	ID=id6892;Note=repeat 1%3B insertion element IS1651%2C 875 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	5797817	5797842	.	+	.	ID=id6893;Note=degenerate 26 bp inverted repeat (8 mismatches);gbkey=repeat_region
NC_003888.3	RefSeq	gene	5797829	5798573	.	-	.	ID=gene5382;Dbxref=GeneID:1100768;Name=SC6G9.05;gbkey=Gene;gene=SC6G9.05;gene_biotype=pseudogene;gene_synonym=SC6G9.05;locus_tag=SCO5328;pseudo=true
NC_003888.3	RefSeq	sequence_feature	5797829	5798573	.	-	.	ID=id6894;Dbxref=GeneID:1100768;Note=SC6G9.05%2C possible transposase pseudogene%2C len: 745 bp%3B similar to TR:Q48342 (EMBL:M28508) Streptomyces lividans ORFA from insertion element IS493 (254 aa)%3Btransposase pseudogene;gbkey=misc_feature;gene=SC6G9.05
NC_003888.3	RefSeq	repeat_region	5798666	5798691	.	-	.	ID=id6895;Note=degenerate 26 bp inverted repeat (8 mismatches);gbkey=repeat_region
NC_003888.3	RefSeq	gene	5798773	5800470	.	+	.	ID=gene5383;Dbxref=GeneID:1100769;Name=SC6G9.04c;gbkey=Gene;gene=SC6G9.04c;gene_biotype=protein_coding;gene_synonym=SC6G9.04c;locus_tag=SCO5329
NC_003888.3	RefSeq	CDS	5798773	5800470	.	+	0	ID=cds5278;Parent=gene5383;Dbxref=Genbank:NP_629470.1,GeneID:1100769;Name=NP_629470.1;Note=SC6G9.04c%2C hypothetical protein%2C len: 565 aa%3B similar to TR:O34810 (EMBL:AE000641) Helicobacter pylori hypothetical protein (578 aa)%2C fasta scores%3B opt: 391 z-score: 464.1 E(): 1.6e-18%2C 23.6%25 identity in 525 aa overlap and to several other hypothetical proteins from the same organism%2C with the highest similarity toward the N-terminus. The coding sequence has unusually low %25G+C content;gbkey=CDS;gene=SC6G9.04c;product=hypothetical protein;protein_id=NP_629470.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5800924	5800927	.	+	.	ID=id6896;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	5800933	5801835	.	+	.	ID=gene5384;Dbxref=GeneID:1100770;Name=SC6G9.03c;gbkey=Gene;gene=SC6G9.03c;gene_biotype=protein_coding;gene_synonym=SC6G9.03c;locus_tag=SCO5330
NC_003888.3	RefSeq	CDS	5800933	5801835	.	+	0	ID=cds5279;Parent=gene5384;Dbxref=Genbank:NP_629471.1,GeneID:1100770;Name=NP_629471.1;Note=SC6G9.03c%2C hypothetical protein%2C len: 300 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SC6G9.03c;product=hypothetical protein;protein_id=NP_629471.1;transl_table=11
NC_003888.3	RefSeq	gene	5801998	5805600	.	-	.	ID=gene5385;Dbxref=GeneID:1100771;Name=SC6G9.02;gbkey=Gene;gene=SC6G9.02;gene_biotype=protein_coding;gene_synonym=SC6G9.02;locus_tag=SCO5331
NC_003888.3	RefSeq	CDS	5801998	5805600	.	-	0	ID=cds5280;Parent=gene5385;Dbxref=Genbank:NP_629472.1,GeneID:1100771;Name=NP_629472.1;Note=SC6G9.02%2C possible DNA methylase%2C len: 1200 aa%3B highly similar to TR:O86561 (EMBL:AL031350) (71.5%25 identity in 867 aa overlap) and TR:O86674 (EMBL:AL031371) (90.8%25 identity in 370 aa overlap) which together constitute a single hypothetical protein split across the join between S.coelicolor cosmids 1F2 and 4G2. It has very weak similarity to DNA methylases%2C which combined with the presence of a DNA methylases signature and possible DNA-binding region (helix-turn-helix) provides circumstantial evidence of DNA-methylase function. The central third of the CDS is relatively AT rich. Contains probable helix-turn-helix motif at aa 38-59 (Score 1036%2C +2.72 SD). Contains PS00092 N-6 Adenine-specific DNA methylases signature;gbkey=CDS;gene=SC6G9.02;product=DNA methylase;protein_id=NP_629472.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5804461	5804481	.	-	.	ID=id6897;Dbxref=GeneID:1100771;Note=PS00092 N-6 Adenine-specific DNA methylases signature;gbkey=misc_feature;gene=SC6G9.02
NC_003888.3	RefSeq	gene	5805823	5807334	.	+	.	ID=gene5386;Dbxref=GeneID:1100772;Name=SC6G9.01c;gbkey=Gene;gene=SC6G9.01c;gene_biotype=protein_coding;gene_synonym=SC6G9.01c,SCBAC5H2.01;locus_tag=SCO5332
NC_003888.3	RefSeq	CDS	5805823	5807334	.	+	0	ID=cds5281;Parent=gene5386;Dbxref=Genbank:NP_733661.1,GeneID:1100772;Name=NP_733661.1;Note=SCBAC5H2.01%2C unknown (fragment)%2C len: >33 aa~SC6G9.01c%2C hypothetical protein%2C partial CDS%2C len: >409 aa%3B unknown function%2C possible CDS suggested by positional base preference and amino acid composition. The coding sequence has unusually low %25G+C content. Alternative start codons are present at codons 9 and 27;gbkey=CDS;gene=SC6G9.01c;product=hypothetical protein;protein_id=NP_733661.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5806951	5808428	.	+	.	ID=id6898;Note=low G+C region (58.79%25);gbkey=misc_feature
NC_003888.3	RefSeq	gene	5807420	5808325	.	-	.	ID=gene5387;Dbxref=GeneID:1100773;Name=SCBAC5H2.02c;gbkey=Gene;gene=SCBAC5H2.02c;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.02c;locus_tag=SCO5333
NC_003888.3	RefSeq	CDS	5807420	5808325	.	-	0	ID=cds5282;Parent=gene5387;Dbxref=Genbank:NP_629473.1,GeneID:1100773;Name=NP_629473.1;Note=SCBAC5H2.02c%2C conserved hypothetical protein%2C len: 301 aa%3B similar to TR:Q9RU61 (EMBL:AE001997) Deinococcus radiodurans conserved hypothetical protein DR1533%2C 299 aa%3B fasta scores: opt: 496 z-score: 583.0 E(): 6.7e-25%3B 46.3%25 identity in 298 aa overlap. Contains Pfam match to entry PF02182 G9a%2C Domain of unknown function;gbkey=CDS;gene=SCBAC5H2.02c;product=hypothetical protein;protein_id=NP_629473.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5807879	5808325	.	-	.	ID=id6899;Dbxref=GeneID:1100773;Note=Pfam match to entry PF02182 G9a%2C Domain of unknown function%2C score 144.00%2C E-value 2.6e-39;gbkey=misc_feature;gene=SCBAC5H2.02c
NC_003888.3	RefSeq	stem_loop	5808415	5808566	.	-	.	ID=id6900;Note=possible stem loop. Score 125: 55/65 (84%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5808844	5809158	.	-	.	ID=gene5388;Dbxref=GeneID:1100774;Name=SCBAC5H2.03c;gbkey=Gene;gene=SCBAC5H2.03c;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.03c;locus_tag=SCO5334
NC_003888.3	RefSeq	CDS	5808844	5809158	.	-	0	ID=cds5283;Parent=gene5388;Dbxref=Genbank:NP_629474.1,GeneID:1100774;Name=NP_629474.1;Note=SCBAC5H2.03c%2C unknown%2C len: 104 aa. Highly hydrophilic. High content in arginine and serine amino acid residues;gbkey=CDS;gene=SCBAC5H2.03c;product=hypothetical protein;protein_id=NP_629474.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5809161	5809164	.	-	.	ID=id6901;gbkey=RBS
NC_003888.3	RefSeq	gene	5809171	5809434	.	+	.	ID=gene5389;Dbxref=GeneID:1100775;Name=SCBAC5H2.04;gbkey=Gene;gene=SCBAC5H2.04;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.04;locus_tag=SCO5335
NC_003888.3	RefSeq	CDS	5809171	5809434	.	+	0	ID=cds5284;Parent=gene5389;Dbxref=Genbank:NP_629475.1,GeneID:1100775;Name=NP_629475.1;Note=SCBAC5H2.04%2C unknown%2C len: 87 aa;gbkey=CDS;gene=SCBAC5H2.04;product=hypothetical protein;protein_id=NP_629475.1;transl_table=11
NC_003888.3	RefSeq	gene	5809422	5809892	.	-	.	ID=gene5390;Dbxref=GeneID:1100776;Name=SCBAC5H2.05c;gbkey=Gene;gene=SCBAC5H2.05c;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.05c;locus_tag=SCO5336
NC_003888.3	RefSeq	CDS	5809422	5809892	.	-	0	ID=cds5285;Parent=gene5390;Dbxref=Genbank:NP_629476.1,GeneID:1100776;Name=NP_629476.1;Note=SCBAC5H2.05c%2C possible mutT-like protein%2C len: 156 aa%3B similar to plasmid borne SW:MUTT_STRAM (EMBL:Z19590) Streptomyces ambofaciens plasmid pSAM2 mutT-like protein ORF154%2C 154 aa%3B fasta scores: opt: 182 z-score: 232.1 E(): 2.4e-05%3B 32.7%25 identity in 153 aa overlap. Contains Pfam match to entry PF00293 mutT%2C MutT-like domain%2C and match to Prosite entry PS00893 mutT domain signature;gbkey=CDS;gene=SCBAC5H2.05c;product=mutT-like protein;protein_id=NP_629476.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5809446	5809841	.	-	.	ID=id6902;Dbxref=GeneID:1100776;Note=Pfam match to entry PF00293 mutT%2C MutT-like domain%2C score 97.10%2C E-value 3.5e-25;gbkey=misc_feature;gene=SCBAC5H2.05c
NC_003888.3	RefSeq	sequence_feature	5809689	5809748	.	-	.	ID=id6903;Dbxref=GeneID:1100776;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SCBAC5H2.05c
NC_003888.3	RefSeq	gene	5809921	5810652	.	-	.	ID=gene5391;Dbxref=GeneID:1100777;Name=SCBAC5H2.06c;gbkey=Gene;gene=SCBAC5H2.06c;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.06c;locus_tag=SCO5337
NC_003888.3	RefSeq	CDS	5809921	5810652	.	-	0	ID=cds5286;Parent=gene5391;Dbxref=Genbank:NP_629477.1,GeneID:1100777;Name=NP_629477.1;Note=SCBAC5H2.06c%2C unknown%2C len: 243 aa;gbkey=CDS;gene=SCBAC5H2.06c;product=hypothetical protein;protein_id=NP_629477.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5810659	5810663	.	-	.	ID=id6904;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5810797	5810801	.	+	.	ID=id6905;gbkey=RBS
NC_003888.3	RefSeq	gene	5810810	5811163	.	+	.	ID=gene5392;Dbxref=GeneID:1100778;Name=pra2;gbkey=Gene;gene=pra2;gene_biotype=protein_coding;gene_synonym=pra2,SCBAC5H2.07;locus_tag=SCO5338
NC_003888.3	RefSeq	CDS	5810810	5811163	.	+	0	ID=cds5287;Parent=gene5392;Dbxref=Genbank:NP_629478.1,GeneID:1100778;Name=NP_629478.1;Note=SCBAC5H2.07%2C pra2%2C probable regulatory protein%2C len: 117 aa%3B highly similar to plasmid borne TR:Q53733 (EMBL:Z34987) Streptomyces ambofaciens pSAM2 regulatory protein Pra%2C 116 aa%3B fasta scores: opt: 535 z-score: 695.9 E(): 3.5e-31%3B 72.9%25 identity in 118 aa overlap and to TR:Q9X8D1 (EMBL:AL049573) Streptomyces coelicolor Pra%2C regulatory protein SCE39.08c%2C 118 aa%3B fasta scores: opt: 565 z-score: 733.8 E(): 0%3B 76.3%25 identity in 118 aa overlap;gbkey=CDS;gene=pra2;product=regulatory protein;protein_id=NP_629478.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5810996	5811031	.	+	.	ID=id6906;Dbxref=GeneID:1100778;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature;gbkey=misc_feature;gene=pra2
NC_003888.3	RefSeq	gene	5811167	5812522	.	+	.	ID=gene5393;Dbxref=GeneID:1100779;Name=SCBAC5H2.08;gbkey=Gene;gene=SCBAC5H2.08;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.08,traSA2;locus_tag=SCO5339
NC_003888.3	RefSeq	CDS	5811167	5812522	.	+	0	ID=cds5288;Parent=gene5393;Dbxref=Genbank:NP_629479.1,GeneID:1100779;Name=NP_629479.1;Note=SCBAC5H2.08%2C traSA2%2C probable plasmid transfer protein%2C len: 451 aa%3B highly similar to TR:Q9X8D0 (EMBL:AL049573) Streptomyces coelicolor plasmid transfer protein TraSA%2C 451 aa%3B fasta scores: opt: 2539 z-score: 2830.9 E(): 0%3B 84.3%25 identity in 451 aa overlap%2C to plasmid borne SW:TRSA_STRAM (EMBL:Z19593) Streptomyces ambofaciens transfer protein TraSA%2C 415 aa%3B fasta scores: opt: 2345 z-score: 2615.4 E(): 0%3B 84.8%25 identity in 415 aa overlap and to TR:O86766 (EMBL:AL031035) Streptomyces coelicolor traSA:integrase fusion protein SC6A9.34%2C 768 aa%3B fasta scores: opt: 2326 z-score: 2253.5 E(): 0%3B 85.4%25 identity in 405 aa overlap. Contains Pfam match to entry PF01580 FtsK_SpoIIIE%2C FtsK/SpoIIIE family and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SCBAC5H2.08;product=plasmid transfer protein;protein_id=NP_629479.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5811581	5812168	.	+	.	ID=id6907;Dbxref=GeneID:1100779;Note=Pfam match to entry PF01580 FtsK_SpoIIIE%2C FtsK/SpoIIIE family%2C score 210.00%2C E-value 3.7e-59;gbkey=misc_feature;gene=SCBAC5H2.08
NC_003888.3	RefSeq	sequence_feature	5811707	5811730	.	+	.	ID=id6908;Dbxref=GeneID:1100779;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC5H2.08
NC_003888.3	RefSeq	ribosome_entry_site	5812532	5812537	.	+	.	ID=id6909;gbkey=RBS
NC_003888.3	RefSeq	gene	5812543	5812740	.	+	.	ID=gene5394;Dbxref=GeneID:1100780;Name=SCBAC5H2.09;gbkey=Gene;gene=SCBAC5H2.09;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.09;locus_tag=SCO5340
NC_003888.3	RefSeq	CDS	5812543	5812740	.	+	0	ID=cds5289;Parent=gene5394;Dbxref=Genbank:NP_629480.1,GeneID:1100780;Name=NP_629480.1;Note=SCBAC5H2.09%2C unknown%2C len: 65 aa;gbkey=CDS;gene=SCBAC5H2.09;product=hypothetical protein;protein_id=NP_629480.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5812746	5812755	.	+	.	ID=id6910;gbkey=RBS
NC_003888.3	RefSeq	gene	5812762	5813430	.	+	.	ID=gene5395;Dbxref=GeneID:1100781;Name=SCBAC5H2.10;gbkey=Gene;gene=SCBAC5H2.10;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.10,spdA2;locus_tag=SCO5341
NC_003888.3	RefSeq	CDS	5812762	5813430	.	+	0	ID=cds5290;Parent=gene5395;Dbxref=Genbank:NP_629481.1,GeneID:1100781;Name=NP_629481.1;Note=SCBAC5H2.10%2C spdA2 protein%2C len: 222 aa%3B highly similar to plasmid borne TR:Q07193 (EMBL:Z19593) Streptomyces ambofaciens probably involved in pSAM2 spreading (intramycelial transfer) SpdA protein%2C 224 aa%3B fasta scores: opt: 1086 z-score: 974.5 E(): 0%3B 74.9%25 identity in 223 aa overlap and to TR:Q9X8C9 (EMBL:AL049573) Streptomyces coelicolor SpdA protein%2C 217 aa%3B fasta scores: opt: 1079 z-score: 968.6 E(): 0%3B 75.5%25 identity in 220 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC5H2.10;product=SpdA2 protein;protein_id=NP_629481.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5813434	5813441	.	+	.	ID=id6911;gbkey=RBS
NC_003888.3	RefSeq	gene	5813452	5813643	.	+	.	ID=gene5396;Dbxref=GeneID:1100782;Name=SCBAC5H2.11;gbkey=Gene;gene=SCBAC5H2.11;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.11,spdB2;locus_tag=SCO5342
NC_003888.3	RefSeq	CDS	5813452	5813643	.	+	0	ID=cds5291;Parent=gene5396;Dbxref=Genbank:NP_629482.1,GeneID:1100782;Name=NP_629482.1;Note=SCBAC5H2.11%2C spdB2 protein%2C len: 63 aa%3B highly similar to plasmid borne TR:Q07194 (EMBL:Z19593) Streptomyces ambofaciens probably involved in pSAM2 spreading (intramycelial transfer) SpdB protein%2C 58 aa%3B fasta scores: opt: 354 z-score: 518.8 E(): 2.5e-21%3B 82.3%25 identity in 62 aa overlap and to TR:Q9X8C8 (EMBL:AL049573) Streptomyces coelicolor SpdB protein%2C 53 aa%3B fasta scores: opt: 350 z-score: 513.7 E(): 4.9e-21%3B 90.4%25 identity in 52 aa overlap;gbkey=CDS;gene=SCBAC5H2.11;product=SpdB2 protein;protein_id=NP_629482.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5813642	5813647	.	+	.	ID=id6912;gbkey=RBS
NC_003888.3	RefSeq	gene	5813654	5813809	.	+	.	ID=gene5397;Dbxref=GeneID:1100783;Name=SCBAC5H2.12;gbkey=Gene;gene=SCBAC5H2.12;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.12,spdC2;locus_tag=SCO5343
NC_003888.3	RefSeq	CDS	5813654	5813809	.	+	0	ID=cds5292;Parent=gene5397;Dbxref=Genbank:NP_629483.1,GeneID:1100783;Name=NP_629483.1;Note=SCBAC5H2.12%2C spdC2 protein%2C len: 51 aa%3B identical to plasmid borne TR:Q07195 (EMBL:AJ005260) Streptomyces ambofaciens probably involved in pSAM2 spreading (intramycelial transfer) SpdC%2C 51 aa and highly similar to TR:Q9X8C7 (EMBL:AL049573) Streptomyces coelicolor SpdC protein%2C 51 aa%3B fasta scores: opt: 280 z-score: 413.2 E(): 1.9e-15%3B 78.4%25 identity in 51 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCBAC5H2.12;product=SpdC2 protein;protein_id=NP_629483.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5813808	5813813	.	+	.	ID=id6913;gbkey=RBS
NC_003888.3	RefSeq	gene	5813822	5814145	.	+	.	ID=gene5398;Dbxref=GeneID:1100784;Name=SCBAC5H2.13;gbkey=Gene;gene=SCBAC5H2.13;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.13,spdD2;locus_tag=SCO5344
NC_003888.3	RefSeq	CDS	5813822	5814145	.	+	0	ID=cds5293;Parent=gene5398;Dbxref=Genbank:NP_629484.1,GeneID:1100784;Name=NP_629484.1;Note=SCBAC5H2.13%2C spdD2 protein%2C len: 107 aa%3B highly similar to plasmid borne TR:Q07196 (EMBL:AJ005260) Streptomyces ambofaciens probably involved in pSAM2 spreading (intramycelial transfer) SpdD protein%2C 104 aa%3B fasta scores: opt: 517 z-score: 454.5 E(): 9.7e-18%3B 74.5%25 identity in 106 aa overlap and to TR:Q9X8C6 (EMBL:AL049573) Streptomyces coelicolor SpdD protein%2C 105 aa%3B fasta scores: opt: 485 z-score: 428.0 E(): 2.9e-16%3B 70.6%25 identity in 109 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC5H2.13;product=SpdD2 protein;protein_id=NP_629484.1;transl_table=11
NC_003888.3	RefSeq	gene	5814235	5814786	.	+	.	ID=gene5399;Dbxref=GeneID:1100785;Name=SCBAC5H2.14;gbkey=Gene;gene=SCBAC5H2.14;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.14;locus_tag=SCO5345
NC_003888.3	RefSeq	CDS	5814235	5814786	.	+	0	ID=cds5294;Parent=gene5399;Dbxref=Genbank:NP_629485.1,GeneID:1100785;Name=NP_629485.1;Note=SCBAC5H2.14%2C conserved hypothetical protein%2C len: 183 aa%3B highly similar to plasmid borne TR:CAA06454 (EMBL:AJ005260) Streptomyces ambofaciens unknown ORF183%2C 183 aa%3B fasta scores: opt: 1018 z-score: 1225.2 E(): 0%3B 81.4%25 identity in 183 aa overlap. Contains Pfam match to entry PF00990 DUF9%2C Domain of unknown function DUF9 and a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCBAC5H2.14;product=hypothetical protein;protein_id=NP_629485.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5814268	5814270	.	+	.	ID=id6914;Dbxref=GeneID:1100785;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCBAC5H2.14
NC_003888.3	RefSeq	sequence_feature	5814298	5814768	.	+	.	ID=id6915;Dbxref=GeneID:1100785;Note=Pfam match to entry PF00990 DUF9%2C Domain of unknown function DUF9%2C score 168.10%2C E-value 1.5e-46;gbkey=misc_feature;gene=SCBAC5H2.14
NC_003888.3	RefSeq	ribosome_entry_site	5814856	5814862	.	+	.	ID=id6916;gbkey=RBS
NC_003888.3	RefSeq	gene	5814872	5815057	.	+	.	ID=gene5400;Dbxref=GeneID:1100786;Name=SCBAC5H2.15;gbkey=Gene;gene=SCBAC5H2.15;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.15;locus_tag=SCO5346
NC_003888.3	RefSeq	CDS	5814872	5815057	.	+	0	ID=cds5295;Parent=gene5400;Dbxref=Genbank:NP_629486.1,GeneID:1100786;Name=NP_629486.1;Note=SCBAC5H2.15%2C unknown%2C len: 61 aa;gbkey=CDS;gene=SCBAC5H2.15;product=hypothetical protein;protein_id=NP_629486.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5815039	5815043	.	+	.	ID=id6917;Dbxref=GeneID:1100786;gbkey=RBS;gene=SCBAC5H2.15
NC_003888.3	RefSeq	gene	5815050	5816414	.	+	.	ID=gene5401;Dbxref=GeneID:1100787;Name=repSA2;gbkey=Gene;gene=repSA2;gene_biotype=protein_coding;gene_synonym=repSA2,SCBAC5H2.16;locus_tag=SCO5347
NC_003888.3	RefSeq	CDS	5815050	5816414	.	+	0	ID=cds5296;Parent=gene5401;Dbxref=Genbank:NP_629487.1,GeneID:1100787;Name=NP_629487.1;Note=SCBAC5H2.16%2C repSA2%2C replication initiation protein%2C len: 454 aa%3B highly similar to plasmid borne SW:REPS_STRAM (EMBL:Z19594) Streptomyces ambofaciens replication initiation protein repSA%2C 459 aa%3B fasta scores: opt: 2806 z-score: 3256.0 E(): 0%3B 90.8%25 identity in 446 aa overlap and to TR:Q9X8C5 (EMBL:AL049573) Streptomyces coelicolor replication initiation protein repSA%2C 466 aa%3B fasta scores: opt: 2759 z-score: 3201.4 E(): 0%3B 88.1%25 identity in 453 aa overlap;gbkey=CDS;gene=repSA2;product=replication initiation protein;protein_id=NP_629487.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5816404	5816409	.	+	.	ID=id6918;Dbxref=GeneID:1100787;gbkey=RBS;gene=repSA2
NC_003888.3	RefSeq	gene	5816416	5816601	.	+	.	ID=gene5402;Dbxref=GeneID:1100788;Name=SCBAC5H2.17;gbkey=Gene;gene=SCBAC5H2.17;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.17;locus_tag=SCO5348
NC_003888.3	RefSeq	CDS	5816416	5816601	.	+	0	ID=cds5297;Parent=gene5402;Dbxref=Genbank:NP_629488.1,GeneID:1100788;Name=NP_629488.1;Note=SCBAC5H2.17%2C possible excisionase%2C len: 61 aa%3B similar to TR:Q53965 (EMBL:X71358) Streptomyces coelicolor plasmid SLP1 DNA for xis and int genes%2C Xis%2C 61 aa%3B fasta scores: opt: 148 z-score: 233.1 E(): 2.1e-05%3B 38.3%25 identity in 60 aa overlap;gbkey=CDS;gene=SCBAC5H2.17;product=excisionase;protein_id=NP_629488.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5816586	5816590	.	+	.	ID=id6919;Dbxref=GeneID:1100788;gbkey=RBS;gene=SCBAC5H2.17
NC_003888.3	RefSeq	gene	5816598	5817971	.	+	.	ID=gene5403;Dbxref=GeneID:1100789;Name=SCBAC5H2.18;gbkey=Gene;gene=SCBAC5H2.18;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.18;locus_tag=SCO5349
NC_003888.3	RefSeq	CDS	5816598	5817971	.	+	0	ID=cds5298;Parent=gene5403;Dbxref=Genbank:NP_629489.1,GeneID:1100789;Name=NP_629489.1;Note=SCBAC5H2.18%2C probable integrase%2C len: 457 aa%3B similar to TR:CAC08268 (EMBL:AL392146) Streptomyces coelicolor integrase Int%2C 455 aa%3B fasta scores: opt: 1486 z-score: 1774.0 E(): 0%3B 50.3%25 identity in 455 aa overlap and to plasmid borne TR:Q53966 (EMBL:X71358) Streptomyces coelicolor plasmid SLP1 DNA for xis and int genes%2C Int%2C 455 aa%3B fasta scores: opt: 1486 z-score: 1774.0 E(): 0%3B 50.3%25 identity in 455 aa overlap;gbkey=CDS;gene=SCBAC5H2.18;product=integrase;protein_id=NP_629489.1;transl_table=11
NC_003888.3	RefSeq	gene	5818003	5818548	.	+	.	ID=gene5404;Dbxref=GeneID:1100790;Name=SCBAC5H2.19;gbkey=Gene;gene=SCBAC5H2.19;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.19;locus_tag=SCO5350
NC_003888.3	RefSeq	CDS	5818003	5818548	.	+	0	ID=cds5299;Parent=gene5404;Dbxref=Genbank:NP_629490.1,GeneID:1100790;Name=NP_629490.1;Note=SCBAC5H2.19%2C unknown%2C len: 181 aa. Contains two TTA leucine codons%2C possible targets for bldA regulation;gbkey=CDS;gene=SCBAC5H2.19;product=hypothetical protein;protein_id=NP_629490.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5818174	5818176	.	+	.	ID=id6920;Dbxref=GeneID:1100790;Note=TTA leucine codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCBAC5H2.19
NC_003888.3	RefSeq	sequence_feature	5818234	5818236	.	+	.	ID=id6921;Dbxref=GeneID:1100790;Note=TTA leucine codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SCBAC5H2.19
NC_003888.3	RefSeq	gene	5818721	5818795	.	-	.	ID=gene5405;Dbxref=GeneID:3240058;Name=SCOt55;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt55
NC_003888.3	RefSeq	tRNA	5818721	5818795	.	-	.	ID=rna72;Parent=gene5405;Dbxref=GeneID:3240058;Note=tRNA Arg anticodon CCG%2C Cove score 77.44;gbkey=tRNA;product=tRNA-Arg
NC_003888.3	RefSeq	exon	5818721	5818795	.	-	.	ID=id6922;Parent=rna72;Dbxref=GeneID:3240058;Note=tRNA Arg anticodon CCG%2C Cove score 77.44;gbkey=tRNA;product=tRNA-Arg
NC_003888.3	RefSeq	gene	5818975	5819478	.	+	.	ID=gene5406;Dbxref=GeneID:1100791;Name=SCBAC5H2.20;gbkey=Gene;gene=SCBAC5H2.20;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.20;locus_tag=SCO5351
NC_003888.3	RefSeq	CDS	5818975	5819478	.	+	0	ID=cds5300;Parent=gene5406;Dbxref=Genbank:NP_629491.1,GeneID:1100791;Name=NP_629491.1;Note=SCBAC5H2.20%2C possible regulatory protein%2C len: 167 aa%3B similar to the N-terminal domain of several regulatory proteins%2C e.g. TR:Q9X6C1 (EMBL:AF135389) Tolypothrix PCC7601 DNA binding response regulator RpaA%2C 247 aa%3B fasta scores: opt: 332 z-score: 343.7 E(): 1.4e-11%3B 42.0%25 identity in 119 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain;gbkey=CDS;gene=SCBAC5H2.20;product=regulatory protein;protein_id=NP_629491.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5818990	5819328	.	+	.	ID=id6923;Dbxref=GeneID:1100791;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 115.90%2C E-value 7.5e-31;gbkey=misc_feature;gene=SCBAC5H2.20
NC_003888.3	RefSeq	gene	5819600	5820643	.	+	.	ID=gene5407;Dbxref=GeneID:1100792;Name=SCBAC5H2.21;gbkey=Gene;gene=SCBAC5H2.21;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.21;locus_tag=SCO5352
NC_003888.3	RefSeq	CDS	5819600	5820643	.	+	0	ID=cds5301;Parent=gene5407;Dbxref=Genbank:NP_629492.1,GeneID:1100792;Name=NP_629492.1;Note=SCBAC5H2.21%2C possible arginyl tRNA synthetase%2C len: 347 aa%3B similar to SW:SYR_BRELA (EMBL:Z21501) Brevibacterium lactofermentum arginyl tRNA synthetase (EC 6.1.1.19) ArgS%2C 550 aa%3B fasta scores (to C-terminal region): opt: 234 z-score: 260.2 E(): 6.4e-07%3B 36.0%25 identity in 161 aa overlap and blastp scores (to N-terminal region): Score %3D 182 (64.1 bits)%2C Expect %3D 1.2e-28%2C Sum P(2) %3D 1.2e-28%3B Identities %3D 45/116 (38%25)%2C Positives %3D 65/116 (56%25) and similar to SW:SYR_MYCTU (EMBL:Z73419) Mycobacterium tuberculosis arginyl t-RNA synthetase (EC 6.1.1.19) ArgS or MTCY373.12%2C 550 aa%3B fasta scores: opt: 216 z-score: 240.5 E(): 8.1e-06%3B 28.1%25 identity in 363 aa overlap;gbkey=CDS;gene=SCBAC5H2.21;product=arginyl tRNA synthetase;protein_id=NP_629492.1;transl_table=11
NC_003888.3	RefSeq	gene	5820662	5822053	.	+	.	ID=gene5408;Dbxref=GeneID:1100793;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;gene_synonym=lysA,SCBAC5H2.22;locus_tag=SCO5353
NC_003888.3	RefSeq	CDS	5820662	5822053	.	+	0	ID=cds5302;Parent=gene5408;Dbxref=Genbank:NP_629493.1,GeneID:1100793;Name=NP_629493.1;Note=SCBAC5H2.22%2C lysA%2C diaminopimelate decarboxylase%2C len: 463 aa%3B highly similar to SW:DCDA_CORGL (EMBL:X07563) Corynebacterium glutamicum diaminopimelate decarboxylase (EC 4.1.1.20) LysA%2C 445 aa%3B fasta scores: opt: 1503 z-score: 1722.5 E(): 0%3B 51.0%25 identity in 443 aa overlap. Contains Pfam match to entry PF00278 Orn_DAP_Arg_deC%2C Pyridoxal-dependent decarboxylase and matches to Prosite entries PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site and PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2;gbkey=CDS;gene=lysA;product=diaminopimelate decarboxylase;protein_id=NP_629493.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5820860	5821957	.	+	.	ID=id6924;Dbxref=GeneID:1100793;Note=Pfam match to entry PF00278 Orn_DAP_Arg_deC%2C Pyridoxal-dependent decarboxylase%2C score 400.80%2C E-value 5.1e-119;gbkey=misc_feature;gene=lysA
NC_003888.3	RefSeq	sequence_feature	5820938	5820994	.	+	.	ID=id6925;Dbxref=GeneID:1100793;Note=PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site;gbkey=misc_feature;gene=lysA
NC_003888.3	RefSeq	sequence_feature	5821460	5821501	.	+	.	ID=id6926;Dbxref=GeneID:1100793;Note=PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2;gbkey=misc_feature;gene=lysA
NC_003888.3	RefSeq	ribosome_entry_site	5822204	5822208	.	+	.	ID=id6927;gbkey=RBS
NC_003888.3	RefSeq	gene	5822215	5823504	.	+	.	ID=gene5409;Dbxref=GeneID:1100794;Name=SCBAC5H2.23;gbkey=Gene;gene=SCBAC5H2.23;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.23,thrA;locus_tag=SCO5354
NC_003888.3	RefSeq	CDS	5822215	5823504	.	+	0	ID=cds5303;Parent=gene5409;Dbxref=Genbank:NP_629494.1,GeneID:1100794;Name=NP_629494.1;Note=catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine;gbkey=CDS;gene=SCBAC5H2.23;product=homoserine dehydrogenase;protein_id=NP_629494.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5822263	5823180	.	+	.	ID=id6928;Dbxref=GeneID:1100794;Note=Pfam match to entry PF00742 Homoserine_dh%2C Homoserine dehydrogenase%2C score 462.40%2C E-value 3.7e-135;gbkey=misc_feature;gene=SCBAC5H2.23
NC_003888.3	RefSeq	sequence_feature	5822764	5822832	.	+	.	ID=id6929;Dbxref=GeneID:1100794;Note=PS01042 Homoserine dehydrogenase signature;gbkey=misc_feature;gene=SCBAC5H2.23
NC_003888.3	RefSeq	sequence_feature	5823265	5823483	.	+	.	ID=id6930;Dbxref=GeneID:1100794;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 59.30%2C E-value 8.6e-14;gbkey=misc_feature;gene=SCBAC5H2.23
NC_003888.3	RefSeq	ribosome_entry_site	5823494	5823499	.	+	.	ID=id6931;Dbxref=GeneID:1100794;gbkey=RBS;gene=SCBAC5H2.23
NC_003888.3	RefSeq	gene	5823511	5824569	.	+	.	ID=gene5410;Dbxref=GeneID:1100795;Name=SCBAC5H2.24;gbkey=Gene;gene=SCBAC5H2.24;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.24,thrC;locus_tag=SCO5355
NC_003888.3	RefSeq	CDS	5823511	5824569	.	+	0	ID=cds5304;Parent=gene5410;Dbxref=Genbank:NP_629495.1,GeneID:1100795;Name=NP_629495.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;gene=SCBAC5H2.24;product=threonine synthase;protein_id=NP_629495.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5823583	5824470	.	+	.	ID=id6932;Dbxref=GeneID:1100795;Note=Pfam match to entry PF00291 PALP%2C Pyridoxal-phosphate dependent enzyme%2C score 310.50%2C E-value 2e-89;gbkey=misc_feature;gene=SCBAC5H2.24
NC_003888.3	RefSeq	sequence_feature	5823667	5823708	.	+	.	ID=id6933;Dbxref=GeneID:1100795;Note=PS00165 Ser/Thr dehydratases pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SCBAC5H2.24
NC_003888.3	RefSeq	ribosome_entry_site	5824837	5824842	.	+	.	ID=id6934;gbkey=RBS
NC_003888.3	RefSeq	gene	5824855	5825784	.	+	.	ID=gene5411;Dbxref=GeneID:1100796;Name=SCBAC5H2.25;gbkey=Gene;gene=SCBAC5H2.25;gene_biotype=protein_coding;gene_synonym=SCBAC5H2.25,thrB;locus_tag=SCO5356
NC_003888.3	RefSeq	CDS	5824855	5825784	.	+	0	ID=cds5305;Parent=gene5411;Dbxref=Genbank:NP_629496.1,GeneID:1100796;Name=NP_629496.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;gbkey=CDS;gene=SCBAC5H2.25;product=homoserine kinase;protein_id=NP_629496.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5825092	5825271	.	+	.	ID=id6935;Dbxref=GeneID:1100796;Note=Pfam match to entry PF00288 GHMP_kinases%2C GHMP kinases ATP-binding proteins%2C score 41.30%2C E-value 3.2e-10;gbkey=misc_feature;gene=SCBAC5H2.25
NC_003888.3	RefSeq	sequence_feature	5825134	5825169	.	+	.	ID=id6936;Dbxref=GeneID:1100796;Note=PS00627 GHMP kinases ATP-binding domain;gbkey=misc_feature;gene=SCBAC5H2.25
NC_003888.3	RefSeq	ribosome_entry_site	5826203	5826207	.	+	.	ID=id6937;gbkey=RBS
NC_003888.3	RefSeq	gene	5826214	5828298	.	+	.	ID=gene5412;Dbxref=GeneID:1100797;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;gene_synonym=2SC6G5.01,SCBAC5H2.26;locus_tag=SCO5357
NC_003888.3	RefSeq	CDS	5826214	5828298	.	+	0	ID=cds5306;Parent=gene5412;Dbxref=Genbank:NP_733662.1,GeneID:1100797;Name=NP_733662.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=NP_733662.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5827174	5828112	.	+	.	ID=id6938;Dbxref=GeneID:1100797;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C score -104.30%2C E-value 0.0002;gbkey=misc_feature;gene=rho
NC_003888.3	RefSeq	sequence_feature	5827546	5827569	.	+	.	ID=id6939;Dbxref=GeneID:1100797;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=rho
NC_003888.3	RefSeq	ribosome_entry_site	5828739	5828743	.	+	.	ID=id6940;gbkey=RBS
NC_003888.3	RefSeq	gene	5828747	5829895	.	+	.	ID=gene5413;Dbxref=GeneID:1100798;Name=2SC6G5.02;gbkey=Gene;gene=2SC6G5.02;gene_biotype=protein_coding;gene_synonym=2SC6G5.02;locus_tag=SCO5358
NC_003888.3	RefSeq	CDS	5828747	5829895	.	+	0	ID=cds5307;Parent=gene5413;Dbxref=Genbank:NP_629497.1,GeneID:1100798;Name=NP_629497.1;Note=2SC6G5.02%2C possible membrane protein%2C len: 382 aa%3B regions similar to many of undefined function e.g. TR:O68907 (EMBL:AF058302) FrnA from Streptomyces roseofulvus (770 aa) fasta scores%3B opt: 747%2C z-score: 793.3%2C E(): 0%2C 40.8%25 identity in 304 aa overlap. Also similar to others from Streptomyces coelicolor e.g. TR:O69850 (EMBL:AL023702)  transcriptional regulator (366 aa) fasta scores%3B opt: 1200%2C z-score: 1277.4%2C E(): 0%2C 52.2%25 identity in 356 aa overlap. Contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=2SC6G5.02;product=hypothetical protein;protein_id=NP_629497.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5830010	5830014	.	+	.	ID=id6941;gbkey=RBS
NC_003888.3	RefSeq	gene	5830020	5830244	.	+	.	ID=gene5414;Dbxref=GeneID:1100799;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;gene_synonym=2SC6G5.03,rpmE3;locus_tag=SCO5359
NC_003888.3	RefSeq	CDS	5830020	5830244	.	+	0	ID=cds5308;Parent=gene5414;Dbxref=Genbank:NP_629498.1,GeneID:1100799;Name=NP_629498.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=NP_629498.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5830020	5830223	.	+	.	ID=id6942;Dbxref=GeneID:1100799;Note=Pfam match to entry PF01197 Ribosomal_L31%2C Ribosomal protein L31%2C score 120.60%2C E-value 2.9e-32;gbkey=misc_feature;gene=rpmE
NC_003888.3	RefSeq	sequence_feature	5830143	5830199	.	+	.	ID=id6943;Dbxref=GeneID:1100799;Note=PS01143 Ribosomal protein L31 signature;gbkey=misc_feature;gene=rpmE
NC_003888.3	RefSeq	ribosome_entry_site	5830342	5830346	.	+	.	ID=id6944;gbkey=RBS
NC_003888.3	RefSeq	gene	5830353	5831429	.	+	.	ID=gene5415;Dbxref=GeneID:1100800;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;gene_synonym=2SC6G5.04;locus_tag=SCO5360
NC_003888.3	RefSeq	CDS	5830353	5831429	.	+	0	ID=cds5309;Parent=gene5415;Dbxref=Genbank:NP_629499.1,GeneID:1100800;Name=NP_629499.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=NP_629499.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5830980	5831321	.	+	.	ID=id6945;Dbxref=GeneID:1100800;Note=Pfam match to entry PF00472 RF-1%2C Peptidyl-tRNA hydrolase domain%2C score 244.60%2C E-value 1.4e-69;gbkey=misc_feature;gene=prfA
NC_003888.3	RefSeq	sequence_feature	5831040	5831090	.	+	.	ID=id6946;Dbxref=GeneID:1100800;Note=PS00745 Prokaryotic-type class I peptide chain release factors signature;gbkey=misc_feature;gene=prfA
NC_003888.3	RefSeq	ribosome_entry_site	5831487	5831491	.	+	.	ID=id6947;gbkey=RBS
NC_003888.3	RefSeq	gene	5831498	5832343	.	+	.	ID=gene5416;Dbxref=GeneID:1100801;Name=2SC6G5.05;gbkey=Gene;gene=2SC6G5.05;gene_biotype=protein_coding;gene_synonym=2SC6G5.05;locus_tag=SCO5361
NC_003888.3	RefSeq	CDS	5831498	5832343	.	+	0	ID=cds5310;Parent=gene5416;Dbxref=Genbank:NP_629500.1,GeneID:1100801;Name=NP_629500.1;Note=2SC6G5.05%2C probable methylase%2C len: 281aa%3B similar to many eg. TR:P72542 (EMBL:U60417) PapM from Streptomyces pristinaespiralis which catalyses the two successive N-methylation steps of 4-amino-L-phenylalanine leading to DMPAPA via 4-methylamino-L-phenylalanine (292 aa) fasta scores%3B opt: 723%2C z-score: 865.6%2C E(): 0%2C 44.5%25 identity in 265 aa overlap. Contains Prosite match to PS00092 N-6 Adenine-specific DNA methylases signature and a possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=2SC6G5.05;product=methylase;protein_id=NP_629500.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5832038	5832058	.	+	.	ID=id6948;Dbxref=GeneID:1100801;Note=PS00092 N-6 Adenine-specific DNA methylases signature;gbkey=misc_feature;gene=2SC6G5.05
NC_003888.3	RefSeq	ribosome_entry_site	5832380	5832385	.	+	.	ID=id6949;gbkey=RBS
NC_003888.3	RefSeq	gene	5832394	5833041	.	+	.	ID=gene5417;Dbxref=GeneID:1100802;Name=2SC6G5.06;gbkey=Gene;gene=2SC6G5.06;gene_biotype=protein_coding;gene_synonym=2SC6G5.06;locus_tag=SCO5362
NC_003888.3	RefSeq	CDS	5832394	5833041	.	+	0	ID=cds5311;Parent=gene5417;Dbxref=Genbank:NP_629501.1,GeneID:1100802;Name=NP_629501.1;Note=2SC6G5.06%2C conserved hypothetical protein%2C len: 281aa%3B similar to many eg. SW:Q10618 (YD01_MYCTU) hypothetical protein from Mycobacterium tuberculosis (217 aa) fasta scores%3B opt: 777%2C z-score: 892.2%2C E(): 0%2C 56.7%25 identity in 208 aa overlap. Contains Pfam match to entry PF01300 Sua5_yciO_yrdC%2C SUA5/yciO/yrdC family and Prosite match to PS01147 SUA5/yciO/yrdC family signature.;gbkey=CDS;gene=2SC6G5.06;product=hypothetical protein;protein_id=NP_629501.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5832457	5832984	.	+	.	ID=id6950;Dbxref=GeneID:1100802;Note=Pfam match to entry PF01300 Sua5_yciO_yrdC%2C SUA5/yciO/yrdC family%2C score 174.80%2C E-value 1.4e-48;gbkey=misc_feature;gene=2SC6G5.06
NC_003888.3	RefSeq	sequence_feature	5832478	5832516	.	+	.	ID=id6951;Dbxref=GeneID:1100802;Note=PS01147 SUA5/yciO/yrdC family signature;gbkey=misc_feature;gene=2SC6G5.06
NC_003888.3	RefSeq	ribosome_entry_site	5833204	5833208	.	+	.	ID=id6952;gbkey=RBS
NC_003888.3	RefSeq	gene	5833218	5833718	.	+	.	ID=gene5418;Dbxref=GeneID:1100803;Name=2SC6G5.07;gbkey=Gene;gene=2SC6G5.07;gene_biotype=protein_coding;gene_synonym=2SC6G5.07;locus_tag=SCO5363
NC_003888.3	RefSeq	CDS	5833218	5833718	.	+	0	ID=cds5312;Parent=gene5418;Dbxref=Genbank:NP_629502.1,GeneID:1100803;Name=NP_629502.1;Note=2SC6G5.07%2C unknown%2C len: 166 aa;gbkey=CDS;gene=2SC6G5.07;product=hypothetical protein;protein_id=NP_629502.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5833796	5833799	.	+	.	ID=id6953;gbkey=RBS
NC_003888.3	RefSeq	gene	5833806	5835062	.	+	.	ID=gene5419;Dbxref=GeneID:1100804;Name=2SC6G5.08;gbkey=Gene;gene=2SC6G5.08;gene_biotype=protein_coding;gene_synonym=2SC6G5.08,glyA3;locus_tag=SCO5364
NC_003888.3	RefSeq	CDS	5833806	5835062	.	+	0	ID=cds5313;Parent=gene5419;Dbxref=Genbank:NP_629503.1,GeneID:1100804;Name=NP_629503.1;Note=2SC6G5.08%2C glyA3%2C serine hydroxymethyltransferase (EC 2.1.2.1)%2C len: 418 aa%3B strongly similar to many e.g. SW:P00477 (GLYA_ECOLI) serine hydroxymethyltransferase from Escherichia coli (417 aa) fasta scores%3B opt: 1164%2C z-score: 1265.0%2C E(): 0%2C 47.9%25 identity in 407 aa overlap. Contains Pfam match to entry PF00464 SHMT%2C Serine hydroxymethyltransferase. Also similar to two others from Streptomyces coelicolor%3B SC2A11.04c (SW:O86565 (GLYA_STRCO)) and SC5G8.05 (TR:CAB89056 (EMBL:AL353872)).;gbkey=CDS;gene=2SC6G5.08;product=serine hydroxymethyltransferase;protein_id=NP_629503.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5833857	5834972	.	+	.	ID=id6954;Dbxref=GeneID:1100804;Note=Pfam match to entry PF00464 SHMT%2C Serine hydroxymethyltransferase%2C score 585.60%2C E-value 2e-175;gbkey=misc_feature;gene=2SC6G5.08
NC_003888.3	RefSeq	ribosome_entry_site	5835198	5835202	.	+	.	ID=id6955;gbkey=RBS
NC_003888.3	RefSeq	gene	5835206	5836510	.	+	.	ID=gene5420;Dbxref=GeneID:1100805;Name=2SC6G5.09;gbkey=Gene;gene=2SC6G5.09;gene_biotype=protein_coding;gene_synonym=2SC6G5.09;locus_tag=SCO5365
NC_003888.3	RefSeq	CDS	5835206	5836510	.	+	0	ID=cds5314;Parent=gene5420;Dbxref=Genbank:NP_629504.1,GeneID:1100805;Name=NP_629504.1;Note=2SC6G5.09%2C possible transferase%2C len: 434 aa%3B similar to many transferases e.g. SW:Q10606 (RFE_MYCTU)  UDP-phosphate alpha-N-acetylglucosaminyltransferase (EC 2.4.1.-) from Mycobacterium tuberculosis (404 aa)%3B fasta scores%3B opt: 965%2C z-score: 1122.5%2C E(): 0%2C 43.7%25 identity in 375 aa overlap and SW:Q03521 (MRAY_BACSU) phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (324 aa) from Bacillus subtilis%3B fasta scores%3B opt: 252%2C z-score: 297.6%2C E(): 4.2e-09%2C 26.9%25 identity in 342 aa overlap. Contains Pfam match to entry PF00953 Glycos_transf_4%2C Glycosyl transferase.;gbkey=CDS;gene=2SC6G5.09;product=transferase;protein_id=NP_629504.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5835449	5835943	.	+	.	ID=id6956;Dbxref=GeneID:1100805;Note=Pfam match to entry PF00953 Glycos_transf_4%2C Glycosyl transferase%2C score 111.10%2C E-value 2.1e-29;gbkey=misc_feature;gene=2SC6G5.09
NC_003888.3	RefSeq	sequence_feature	5836416	5844995	.	+	.	ID=id6957;Note=Region equivalent to that previously sequenced in Streptomyces lividans (EMBL:Z22606).;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5836761	5836764	.	+	.	ID=id6958;gbkey=RBS
NC_003888.3	RefSeq	gene	5836773	5837207	.	+	.	ID=gene5421;Dbxref=GeneID:1100806;Name=2SC6G5.10;gbkey=Gene;gene=2SC6G5.10;gene_biotype=protein_coding;gene_synonym=2SC6G5.10,atpI;locus_tag=SCO5366
NC_003888.3	RefSeq	CDS	5836773	5837207	.	+	0	ID=cds5315;Parent=gene5421;Dbxref=Genbank:NP_629505.1,GeneID:1100806;Name=NP_629505.1;Note=2SC6G5.10%2C atpI%2C ATP synthase I%2C len: 144 aa%3B identical to SW:P50015 (ATPZ_STRLI) ATP synthase I from Streptomyces lividans (144 aa). Contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=2SC6G5.10;product=ATP synthase I;protein_id=NP_629505.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5837422	5837426	.	+	.	ID=id6959;gbkey=RBS
NC_003888.3	RefSeq	gene	5837433	5838254	.	+	.	ID=gene5422;Dbxref=GeneID:1100807;Name=2SC6G5.11;gbkey=Gene;gene=2SC6G5.11;gene_biotype=protein_coding;gene_synonym=2SC6G5.11,atpB;locus_tag=SCO5367
NC_003888.3	RefSeq	CDS	5837433	5838254	.	+	0	ID=cds5316;Parent=gene5422;Dbxref=Genbank:NP_629506.1,GeneID:1100807;Name=NP_629506.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;gene=2SC6G5.11;product=F0F1 ATP synthase subunit A;protein_id=NP_629506.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5837739	5838233	.	+	.	ID=id6960;Dbxref=GeneID:1100807;Note=Pfam match to entry PF00119 ATP-synt_A%2C ATP synthase A chain%2C score 75.20%2C E-value 1.3e-18;gbkey=misc_feature;gene=2SC6G5.11
NC_003888.3	RefSeq	sequence_feature	5838021	5838050	.	+	.	ID=id6961;Dbxref=GeneID:1100807;Note=PS00449 ATP synthase a subunit signature;gbkey=misc_feature;gene=2SC6G5.11
NC_003888.3	RefSeq	ribosome_entry_site	5838317	5838322	.	+	.	ID=id6962;gbkey=RBS
NC_003888.3	RefSeq	gene	5838330	5838560	.	+	.	ID=gene5423;Dbxref=GeneID:1100808;Name=2SC6G5.12;gbkey=Gene;gene=2SC6G5.12;gene_biotype=protein_coding;gene_synonym=2SC6G5.12,atpE;locus_tag=SCO5368
NC_003888.3	RefSeq	CDS	5838330	5838560	.	+	0	ID=cds5317;Parent=gene5423;Dbxref=Genbank:NP_629507.1,GeneID:1100808;Name=NP_629507.1;Note=2SC6G5.12%2C atpE%2C ATP synthase C chain (EC 3.6.1.34)%2C len: 76aa%3B strongly similar to many eg. SW:P12409 (ATPL_ANASP) ATP synthase C chain from Anabaena sp. (strain PCC 7120) (81 aa) fasta scores%3B opt: 194%2C z-score: 262.9%2C E(): 3.6e-07%2C 43.8%25 identity in 73 aa overlap. Identical to SW:P50014 (ATPL_STRLI) ATP synthase C chain from Streptomyces lividans. Contains Pfam match to entry PF00137 ATP-synt_C%2C ATP synthase subunit C%2C Prosite match to PS00605 ATP synthase c subunit signature and possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SC6G5.12;product=ATP synthase subunit C;protein_id=NP_629507.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5838363	5838554	.	+	.	ID=id6963;Dbxref=GeneID:1100808;Note=Pfam match to entry PF00137 ATP-synt_C%2C ATP synthase subunit C%2C score 48.40%2C E-value 1.6e-10;gbkey=misc_feature;gene=2SC6G5.12
NC_003888.3	RefSeq	sequence_feature	5838447	5838512	.	+	.	ID=id6964;Dbxref=GeneID:1100808;Note=PS00605 ATP synthase c subunit signature;gbkey=misc_feature;gene=2SC6G5.12
NC_003888.3	RefSeq	gene	5838602	5839156	.	+	.	ID=gene5424;Dbxref=GeneID:1100809;Name=2SC6G5.13;gbkey=Gene;gene=2SC6G5.13;gene_biotype=protein_coding;gene_synonym=2SC6G5.13,atpf;locus_tag=SCO5369
NC_003888.3	RefSeq	CDS	5838602	5839156	.	+	0	ID=cds5318;Parent=gene5424;Dbxref=Genbank:NP_629508.1,GeneID:1100809;Name=NP_629508.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;gene=2SC6G5.13;product=F0F1 ATP synthase subunit B;protein_id=NP_629508.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5838665	5839129	.	+	.	ID=id6965;Dbxref=GeneID:1100809;Note=Pfam match to entry PF00430 ATP-synt_B%2C ATP synthase B/B' CF(0)%2C score 108.90%2C E-value 7.3e-30;gbkey=misc_feature;gene=2SC6G5.13
NC_003888.3	RefSeq	gene	5839153	5839977	.	+	.	ID=gene5425;Dbxref=GeneID:1100810;Name=2SC6G5.14;gbkey=Gene;gene=2SC6G5.14;gene_biotype=protein_coding;gene_synonym=2SC6G5.14,atpH;locus_tag=SCO5370
NC_003888.3	RefSeq	CDS	5839153	5839977	.	+	0	ID=cds5319;Parent=gene5425;Dbxref=Genbank:NP_629509.1,GeneID:1100810;Name=NP_629509.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=2SC6G5.14;product=F0F1 ATP synthase subunit delta;protein_id=NP_629509.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5839720	5839968	.	+	.	ID=id6966;Dbxref=GeneID:1100810;Note=Pfam match to entry PF00213 OSCP%2C ATP synthase delta (OSCP) subunit%2C score 49.70%2C E-value 1.2e-13;gbkey=misc_feature;gene=2SC6G5.14
NC_003888.3	RefSeq	sequence_feature	5839852	5839911	.	+	.	ID=id6967;Dbxref=GeneID:1100810;Note=PS00389 ATP synthase delta (OSCP) subunit signature;gbkey=misc_feature;gene=2SC6G5.14
NC_003888.3	RefSeq	ribosome_entry_site	5840157	5840162	.	+	.	ID=id6968;gbkey=RBS
NC_003888.3	RefSeq	gene	5840171	5841760	.	+	.	ID=gene5426;Dbxref=GeneID:1100811;Name=2SC6G5.15;gbkey=Gene;gene=2SC6G5.15;gene_biotype=protein_coding;gene_synonym=2SC6G5.15,atpA;locus_tag=SCO5371
NC_003888.3	RefSeq	CDS	5840171	5841760	.	+	0	ID=cds5320;Parent=gene5426;Dbxref=Genbank:NP_629510.1,GeneID:1100811;Name=NP_629510.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;gene=2SC6G5.15;product=F0F1 ATP synthase subunit alpha;protein_id=NP_629510.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5840261	5841301	.	+	.	ID=id6969;Dbxref=GeneID:1100811;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C score 564.10%2C E-value 8.9e-166;gbkey=misc_feature;gene=2SC6G5.15
NC_003888.3	RefSeq	sequence_feature	5840687	5840710	.	+	.	ID=id6970;Dbxref=GeneID:1100811;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC6G5.15
NC_003888.3	RefSeq	sequence_feature	5841269	5841298	.	+	.	ID=id6971;Dbxref=GeneID:1100811;Note=PS00152 ATP synthase alpha and beta subunits signature;gbkey=misc_feature;gene=2SC6G5.15
NC_003888.3	RefSeq	sequence_feature	5841302	5841706	.	+	.	ID=id6972;Dbxref=GeneID:1100811;Note=Pfam match to entry PF00422 ATP-synt_A-c%2C ATP synthase Alpha chain%2C C terminal%2C score 255.80%2C E-value 2.1e-86;gbkey=misc_feature;gene=2SC6G5.15
NC_003888.3	RefSeq	ribosome_entry_site	5841767	5841771	.	+	.	ID=id6973;gbkey=RBS
NC_003888.3	RefSeq	gene	5841782	5842699	.	+	.	ID=gene5427;Dbxref=GeneID:1100812;Name=2SC6G5.16;gbkey=Gene;gene=2SC6G5.16;gene_biotype=protein_coding;gene_synonym=2SC6G5.16,atpG;locus_tag=SCO5372
NC_003888.3	RefSeq	CDS	5841782	5842699	.	+	0	ID=cds5321;Parent=gene5427;Dbxref=Genbank:NP_629511.1,GeneID:1100812;Name=NP_629511.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;gene=2SC6G5.16;product=F0F1 ATP synthase subunit gamma;protein_id=NP_629511.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5841788	5842669	.	+	.	ID=id6974;Dbxref=GeneID:1100812;Note=Pfam match to entry PF00231 ATP-synt%2C ATP synthase%2C score 368.40%2C E-value 7.3e-107;gbkey=misc_feature;gene=2SC6G5.16
NC_003888.3	RefSeq	sequence_feature	5842625	5842666	.	+	.	ID=id6975;Dbxref=GeneID:1100812;Note=PS00153 ATP synthase gamma subunit signature;gbkey=misc_feature;gene=2SC6G5.16
NC_003888.3	RefSeq	gene	5842699	5844135	.	+	.	ID=gene5428;Dbxref=GeneID:1100813;Name=2SC6G5.17;gbkey=Gene;gene=2SC6G5.17;gene_biotype=protein_coding;gene_synonym=2SC6G5.17,atpD;locus_tag=SCO5373
NC_003888.3	RefSeq	CDS	5842699	5844135	.	+	0	ID=cds5322;Parent=gene5428;Dbxref=Genbank:NP_629512.1,GeneID:1100813;Name=NP_629512.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit;gbkey=CDS;gene=2SC6G5.17;product=F0F1 ATP synthase subunit beta;protein_id=NP_629512.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5842747	5843772	.	+	.	ID=id6976;Dbxref=GeneID:1100813;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C score 564.70%2C E-value 5.9e-166;gbkey=misc_feature;gene=2SC6G5.17
NC_003888.3	RefSeq	sequence_feature	5843188	5843211	.	+	.	ID=id6977;Dbxref=GeneID:1100813;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC6G5.17
NC_003888.3	RefSeq	sequence_feature	5843740	5843769	.	+	.	ID=id6978;Dbxref=GeneID:1100813;Note=PS00152 ATP synthase alpha and beta subunits signature;gbkey=misc_feature;gene=2SC6G5.17
NC_003888.3	RefSeq	sequence_feature	5843836	5844132	.	+	.	ID=id6979;Dbxref=GeneID:1100813;Note=Pfam match to entry PF00306 ATP-synt_ab_C%2C ATP synthase ab C terminal%2C score 150.80%2C E-value 2.4e-41;gbkey=misc_feature;gene=2SC6G5.17
NC_003888.3	RefSeq	ribosome_entry_site	5844257	5844261	.	+	.	ID=id6980;gbkey=RBS
NC_003888.3	RefSeq	gene	5844267	5844641	.	+	.	ID=gene5429;Dbxref=GeneID:1100814;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;gene_synonym=2SC6G5.18;locus_tag=SCO5374
NC_003888.3	RefSeq	CDS	5844267	5844641	.	+	0	ID=cds5323;Parent=gene5429;Dbxref=Genbank:NP_629513.1,GeneID:1100814;Name=NP_629513.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the epsilon subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=atpC;product=F0F1 ATP synthase subunit epsilon;protein_id=NP_629513.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5844273	5844581	.	+	.	ID=id6981;Dbxref=GeneID:1100814;Note=Pfam match to entry PF00401 ATP-synt_DE%2C ATP synthase%2C Delta/Epsilon chain%2C score 93.90%2C E-value 7.1e-25;gbkey=misc_feature;gene=atpC
NC_003888.3	RefSeq	ribosome_entry_site	5844769	5844775	.	+	.	ID=id6982;gbkey=RBS
NC_003888.3	RefSeq	gene	5844778	5845233	.	+	.	ID=gene5430;Dbxref=GeneID:1100815;Name=2SC6G5.19;gbkey=Gene;gene=2SC6G5.19;gene_biotype=protein_coding;gene_synonym=2SC6G5.19;locus_tag=SCO5375
NC_003888.3	RefSeq	CDS	5844778	5845233	.	+	0	ID=cds5324;Parent=gene5430;Dbxref=Genbank:NP_629514.1,GeneID:1100815;Name=NP_629514.1;Note=2SC6G5.19%2C possible hypothetical protein%2C len: 151aa%3B similar to SW:Q10620 (YD12_MYCTU) hypothetical protein from Mycobacterium tuberculosis (147 aa) fasta scores%3B opt: 282%2C z-score: 358.4%2C E(): 1.7e-12%2C 38.9%25 identity in 144 aa overlap. Contains possible N-terminal signal sequence peptide;gbkey=CDS;gene=2SC6G5.19;product=hypothetical protein;protein_id=NP_629514.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5844992	5847201	.	-	.	ID=id6983;Note=Previously sequenced as EMBL:AB017010.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5845252	5847081	.	-	.	ID=gene5431;Dbxref=GeneID:1100816;Name=2SC6G5.20c;gbkey=Gene;gene=2SC6G5.20c;gene_biotype=protein_coding;gene_synonym=2SC6G5.20c,chiC;locus_tag=SCO5376
NC_003888.3	RefSeq	CDS	5845252	5847081	.	-	0	ID=cds5325;Parent=gene5431;Dbxref=Genbank:NP_629515.1,GeneID:1100816;Name=NP_629515.1;Note=2SC6G5.20c%2C chiC%2C chitinase C (EC 3.2.1.14) ( hypothetical protein)%2C len: 609aa%3B previously sequenced as TR:Q9Z9M8 (EMBL:AB017010). Strongly similar to others from Streptomyces spp. e.g. SW:P11220 (CHIT_STRPL) chitinase 63 precursor from Streptomyces plicatus (610 aa) fasta scores%3B opt: 3997%2C z-score: 3833.9%2C E(): 0%2C 95.1%25 identity in 611 aa overlap. Contains Pfam match to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18%2C Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain%2C Prosite match to PS00561 Cellulose-binding domain%2C bacterial type%2C Prosite match to PS01095 Chitinases family 18 active site and Prosite match to PS00018 EF-hand calcium-binding domain. Also contains a possible non-cleavable N-terminal signal sequence.;gbkey=CDS;gene=2SC6G5.20c;product=chitinase C;protein_id=NP_629515.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5845300	5846364	.	-	.	ID=id6984;Dbxref=GeneID:1100816;Note=Pfam match to entry PF00704 Glyco_hydro_18%2C Glycosyl hydrolases family 18%2C score 642.90%2C E-value 8.2e-191;gbkey=misc_feature;gene=2SC6G5.20c
NC_003888.3	RefSeq	sequence_feature	5845774	5845812	.	-	.	ID=id6985;Dbxref=GeneID:1100816;Note=PS00018 EF-hand calcium-binding domain;gbkey=misc_feature;gene=2SC6G5.20c
NC_003888.3	RefSeq	sequence_feature	5845936	5845962	.	-	.	ID=id6986;Dbxref=GeneID:1100816;Note=PS01095 Chitinases family 18 active site;gbkey=misc_feature;gene=2SC6G5.20c
NC_003888.3	RefSeq	sequence_feature	5846272	5849812	.	-	.	ID=id6987;Note=Region previously sequenced as EMBL:AF102271;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	5846425	5846658	.	-	.	ID=id6988;Dbxref=GeneID:1100816;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 66.30%2C E-value 6.4e-16;gbkey=misc_feature;gene=2SC6G5.20c
NC_003888.3	RefSeq	sequence_feature	5846689	5846982	.	-	.	ID=id6989;Dbxref=GeneID:1100816;Note=Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain%2C score 176.90%2C E-value 2.6e-50;gbkey=misc_feature;gene=2SC6G5.20c
NC_003888.3	RefSeq	sequence_feature	5846746	5846787	.	-	.	ID=id6990;Dbxref=GeneID:1100816;Note=PS00561 Cellulose-binding domain%2C bacterial type;gbkey=misc_feature;gene=2SC6G5.20c
NC_003888.3	RefSeq	ribosome_entry_site	5847087	5847093	.	-	.	ID=id6991;gbkey=RBS
NC_003888.3	RefSeq	gene	5847229	5847870	.	-	.	ID=gene5432;Dbxref=GeneID:1100817;Name=2SC6G5.21c;gbkey=Gene;gene=2SC6G5.21c;gene_biotype=protein_coding;gene_synonym=2SC6G5.21c,chiR;locus_tag=SCO5377
NC_003888.3	RefSeq	CDS	5847229	5847870	.	-	0	ID=cds5326;Parent=gene5432;Dbxref=Genbank:NP_629516.1,GeneID:1100817;Name=NP_629516.1;Note=2SC6G5.21c%2C chiR%2C chitinase two-component response regulator%2C len: 213 aa%3B previously sequenced as TR:Q9Z677 (EMBL:AF102271). Similar to many others eg. TR:Q9RHU6 (EMBL:AB016841) response regulator from chitinase regulatory system in Streptomyces thermoviolaceus (213 aa) fasta scores%3B opt: 956%2C z-score: 1085.4%2C E(): 0%2C 77.0%25 identity in 213 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C Prosite match to PS00622 Bacterial regulatory proteins%2C luxR family signature and a helix-turn-helix motif (residue 169-190).;gbkey=CDS;gene=2SC6G5.21c;product=chitinase two-component response regulator;protein_id=NP_629516.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5847232	5847420	.	-	.	ID=id6992;Dbxref=GeneID:1100817;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 71.20%2C E-value 2.3e-17;gbkey=misc_feature;gene=2SC6G5.21c
NC_003888.3	RefSeq	sequence_feature	5847286	5847369	.	-	.	ID=id6993;Dbxref=GeneID:1100817;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=2SC6G5.21c
NC_003888.3	RefSeq	sequence_feature	5847529	5847867	.	-	.	ID=id6994;Dbxref=GeneID:1100817;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 115.50%2C E-value 1e-30;gbkey=misc_feature;gene=2SC6G5.21c
NC_003888.3	RefSeq	gene	5847867	5849063	.	-	.	ID=gene5433;Dbxref=GeneID:1100818;Name=2SC6G5.22c;gbkey=Gene;gene=2SC6G5.22c;gene_biotype=protein_coding;gene_synonym=2SC6G5.22c,chiS;locus_tag=SCO5378
NC_003888.3	RefSeq	CDS	5847867	5849063	.	-	0	ID=cds5327;Parent=gene5433;Dbxref=Genbank:NP_629517.1,GeneID:1100818;Name=NP_629517.1;Note=2SC6G5.22c%2C chiS%2C chitinase two-component sensor kinase%2C len: 398aa%3B previously sequenced as TR:Q9Z678 (EMBL:AF102271). Similar to many others eg. TR:Q9RHU7 (EMBL:AB016841) sensor kinase from chitinase regulatory system in Streptomyces thermoviolaceus (448 aa) fasta scores%3B opt: 1663%2C z-score: 1797.1%2C E(): 0%2C 67.4%25 identity in 396 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SC6G5.22c;product=chitinase two-component sensor kinase;protein_id=NP_629517.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5847878	5847883	.	-	.	ID=id6995;Dbxref=GeneID:1100818;gbkey=RBS;gene=2SC6G5.22c
NC_003888.3	RefSeq	ribosome_entry_site	5849065	5849071	.	-	.	ID=id6996;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5849203	5849210	.	+	.	ID=id6997;gbkey=RBS
NC_003888.3	RefSeq	gene	5849216	5849800	.	+	.	ID=gene5434;Dbxref=GeneID:1100819;Name=2SC6G5.23;gbkey=Gene;gene=2SC6G5.23;gene_biotype=protein_coding;gene_synonym=2SC6G5.23;locus_tag=SCO5379
NC_003888.3	RefSeq	CDS	5849216	5849800	.	+	0	ID=cds5328;Parent=gene5434;Dbxref=Genbank:NP_629518.1,GeneID:1100819;Name=NP_629518.1;Note=2SC6G5.23%2C possible membrane protein%2C len: 194aa%3B similar to TR:O31780 (EMBL:Z99112) hypothetical protein from Bacillus subtilis (185 aa) fasta scores%3B opt: 399%2C z-score: 492.4%2C E(): 5.9e-20%2C 34.3%25 identity in 178 aa overlap. Contains possible membrane-spanning hydrophobic regions. Also contains Prosite match to PS00622 Bacterial regulatory proteins%2C luxR family signature but no similarity to any other regulators.;gbkey=CDS;gene=2SC6G5.23;product=hypothetical protein;protein_id=NP_629518.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5849411	5849494	.	+	.	ID=id6998;Dbxref=GeneID:1100819;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=2SC6G5.23
NC_003888.3	RefSeq	ribosome_entry_site	5849784	5849789	.	+	.	ID=id6999;Dbxref=GeneID:1100819;gbkey=RBS;gene=2SC6G5.23
NC_003888.3	RefSeq	gene	5849797	5849985	.	+	.	ID=gene5435;Dbxref=GeneID:1100820;Name=2SC6G5.24;gbkey=Gene;gene=2SC6G5.24;gene_biotype=protein_coding;gene_synonym=2SC6G5.24;locus_tag=SCO5380
NC_003888.3	RefSeq	CDS	5849797	5849985	.	+	0	ID=cds5329;Parent=gene5435;Dbxref=Genbank:NP_629519.1,GeneID:1100820;Name=NP_629519.1;Note=2SC6G5.24%2C possible membrane protein%2C len: 62aa%3B weakly similar to TR:Q9XA75 (EMBL:AL096822) membrane protein from Streptomyces coelicolor (83 aa) fasta scores%3B opt:82%2C z-score: 135.0%2C E(): 4.7%2C 37.0%25 identity in 54 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SC6G5.24;product=hypothetical protein;protein_id=NP_629519.1;transl_table=11
NC_003888.3	RefSeq	gene	5850114	5850686	.	-	.	ID=gene5436;Dbxref=GeneID:1100821;Name=2SC6G5.25c;gbkey=Gene;gene=2SC6G5.25c;gene_biotype=protein_coding;gene_synonym=2SC6G5.25c;locus_tag=SCO5381
NC_003888.3	RefSeq	CDS	5850114	5850686	.	-	0	ID=cds5330;Parent=gene5436;Dbxref=Genbank:NP_629520.1,GeneID:1100821;Name=NP_629520.1;Note=2SC6G5.25c%2C conserved hypothetical protein%2C len: 190aa%3B similar to many eg. SW:Q10622 (Y02Y_MYCTU) hypothetical protein from Mycobacterium tuberculosis (193 aa) fasta scores%3B opt: 800%2C z-score: 984.0%2C E(): 0%2C 65.6%25 identity in 189 aa overlap. Contains Pfam match to entry PF01923 DUF80%2C Protein of unknown function.;gbkey=CDS;gene=2SC6G5.25c;product=hypothetical protein;protein_id=NP_629520.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5850156	5850668	.	-	.	ID=id7000;Dbxref=GeneID:1100821;Note=Pfam match to entry PF01923 DUF80%2C Protein of unknown function%2C score 258.50%2C E-value 8.8e-74;gbkey=misc_feature;gene=2SC6G5.25c
NC_003888.3	RefSeq	gene	5850700	5851449	.	-	.	ID=gene5437;Dbxref=GeneID:1100822;Name=2SC6G5.26c;gbkey=Gene;gene=2SC6G5.26c;gene_biotype=protein_coding;gene_synonym=2SC6G5.26c;locus_tag=SCO5382
NC_003888.3	RefSeq	CDS	5850700	5851449	.	-	0	ID=cds5331;Parent=gene5437;Dbxref=Genbank:NP_629521.1,GeneID:1100822;Name=NP_629521.1;Note=2SC6G5.26c%2C possible ABC transporter%2C integral membrane subunit%2C len: 249aa%3B similar to TR:Q53627 (EMBL:U43537) membrane protein involved in mithramycin resistance from Streptomyces argillaceus (233 aa) fasta scores%3B opt: 704%2C z-score: 811.8%2C E(): 0%2C 47.1%25 identity in 227 aa overlap. Contains Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter and possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=2SC6G5.26c;product=ABC transporter;protein_id=NP_629521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5850706	5851446	.	-	.	ID=id7001;Dbxref=GeneID:1100822;Note=Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter%2C score -64.30%2C E-value 0.0054;gbkey=misc_feature;gene=2SC6G5.26c
NC_003888.3	RefSeq	gene	5851470	5852252	.	-	.	ID=gene5438;Dbxref=GeneID:1100823;Name=2SC6G5.27c;gbkey=Gene;gene=2SC6G5.27c;gene_biotype=protein_coding;gene_synonym=2SC6G5.27c;locus_tag=SCO5383
NC_003888.3	RefSeq	CDS	5851470	5852252	.	-	0	ID=cds5332;Parent=gene5438;Dbxref=Genbank:NP_629522.1,GeneID:1100823;Name=NP_629522.1;Note=2SC6G5.27c%2C possible ABC transporter%2C ATP-binding subunit%2C len: 260aa%3B similar to many eg. TR:Q53626 (EMBL:U43537) ATP-binding protein involved in mithramycin resistance from Streptomyces argillaceus (320 aa) fasta scores%3B opt: 901%2C z-score: 998.1%2C E():0%2C 59.6%25 identity in 225 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) and Prosite match to PS00211 ABC transporters family signature.;gbkey=CDS;gene=2SC6G5.27c;product=ABC transporter ATP-binding protein;protein_id=NP_629522.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5851608	5852156	.	-	.	ID=id7002;Dbxref=GeneID:1100823;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 221.10%2C E-value 1.7e-62;gbkey=misc_feature;gene=2SC6G5.27c
NC_003888.3	RefSeq	sequence_feature	5851794	5851838	.	-	.	ID=id7003;Dbxref=GeneID:1100823;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=2SC6G5.27c
NC_003888.3	RefSeq	sequence_feature	5852112	5852135	.	-	.	ID=id7004;Dbxref=GeneID:1100823;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC6G5.27c
NC_003888.3	RefSeq	gene	5852346	5852987	.	+	.	ID=gene5439;Dbxref=GeneID:1100824;Name=2SC6G5.28;gbkey=Gene;gene=2SC6G5.28;gene_biotype=protein_coding;gene_synonym=2SC6G5.28;locus_tag=SCO5384
NC_003888.3	RefSeq	CDS	5852346	5852987	.	+	0	ID=cds5333;Parent=gene5439;Dbxref=Genbank:NP_629523.1,GeneID:1100824;Name=NP_629523.1;Note=2SC6G5.28%2C possible tetR-family transcriptional regulator%2C len: 213 aa%3B similar to many proposed transcriptional regulators e.g. TR:CAB88457 (EMBL:AL353815) tetR-family transcriptional regulator from Streptomyces coelicolor (215 aa) fasta scores%3B opt: 370%2C z-score: 461.9%2C E(): 3e-18%2C 36.8%25 identity in 209 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a helix-turn-helix motif (residue 33-54).;gbkey=CDS;gene=2SC6G5.28;product=TetR family transcriptional regulator;protein_id=NP_629523.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5852394	5852528	.	+	.	ID=id7005;Dbxref=GeneID:1100824;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 55.80%2C E-value 7.2e-13;gbkey=misc_feature;gene=2SC6G5.28
NC_003888.3	RefSeq	ribosome_entry_site	5853113	5853116	.	+	.	ID=id7006;gbkey=RBS
NC_003888.3	RefSeq	gene	5853124	5853972	.	+	.	ID=gene5440;Dbxref=GeneID:1100825;Name=2SC6G5.29;gbkey=Gene;gene=2SC6G5.29;gene_biotype=protein_coding;gene_synonym=2SC6G5.29;locus_tag=SCO5385
NC_003888.3	RefSeq	CDS	5853124	5853972	.	+	0	ID=cds5334;Parent=gene5440;Dbxref=Genbank:NP_629524.1,GeneID:1100825;Name=NP_629524.1;Note=2SC6G5.29%2C possible 3-hydroxybutyryl-coA dehydrogenase%2C len: 282 aa%3B similar to many eg. SW:P52041 (HBD_CLOAB) 3-hydroxybutyryl-coA dehydrogenase from Clostridium acetobutylicum (282 aa) fasta scores%3B opt: 806%2C z-score: 947.0%2C E(): 0%2C 44.6%25 identity in 280 aa overlap. Contains Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase and Prosite match to PS00067 3-hydroxyacyl-CoA dehydrogenase signature.;gbkey=CDS;gene=2SC6G5.29;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=NP_629524.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5853136	5853969	.	+	.	ID=id7007;Dbxref=GeneID:1100825;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C score 397.80%2C E-value 1.1e-115;gbkey=misc_feature;gene=2SC6G5.29
NC_003888.3	RefSeq	sequence_feature	5853670	5853744	.	+	.	ID=id7008;Dbxref=GeneID:1100825;Note=PS00067 3-hydroxyacyl-CoA dehydrogenase signature;gbkey=misc_feature;gene=2SC6G5.29
NC_003888.3	RefSeq	gene	5854163	5854486	.	+	.	ID=gene5441;Dbxref=GeneID:1100826;Name=2SC6G5.30;gbkey=Gene;gene=2SC6G5.30;gene_biotype=protein_coding;gene_synonym=2SC6G5.30;locus_tag=SCO5386
NC_003888.3	RefSeq	CDS	5854163	5854486	.	+	0	ID=cds5335;Parent=gene5441;Dbxref=Genbank:NP_629525.1,GeneID:1100826;Name=NP_629525.1;Note=2SC6G5.30%2C possible anti-sigma factor antagonist%2C len: 107aa%3B similar to many eg. SW:P95842 (RSBV_STAAU) anti-sigma B factor antagonist from Staphylococcus aureus (108 aa) fasta scores%3B opt: 164%2C z-score: 226.7%2C E(): 3.7e-05%2C 30.9%25 identity in 94 aa overlap. Contains Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family.;gbkey=CDS;gene=2SC6G5.30;product=anti-sigma factor antagonist;protein_id=NP_629525.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5854163	5854468	.	+	.	ID=id7009;Dbxref=GeneID:1100826;Note=Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family%2C score 40.70%2C E-value 3.3e-08;gbkey=misc_feature;gene=2SC6G5.30
NC_003888.3	RefSeq	gene	5854720	5857344	.	+	.	ID=gene5442;Dbxref=GeneID:1100827;Name=2SC6G5.31;gbkey=Gene;gene=2SC6G5.31;gene_biotype=protein_coding;gene_synonym=2SC6G5.31;locus_tag=SCO5387
NC_003888.3	RefSeq	CDS	5854720	5857344	.	+	0	ID=cds5336;Parent=gene5442;Dbxref=Genbank:NP_629526.1,GeneID:1100827;Name=NP_629526.1;Note=2SC6G5.31%2C unknown%2C len: 874 aa;gbkey=CDS;gene=2SC6G5.31;product=hypothetical protein;protein_id=NP_629526.1;transl_table=11
NC_003888.3	RefSeq	gene	5857445	5858200	.	-	.	ID=gene5443;Dbxref=GeneID:1100828;Name=2SC6G5.32c;gbkey=Gene;gene=2SC6G5.32c;gene_biotype=protein_coding;gene_synonym=2SC6G5.32c;locus_tag=SCO5388
NC_003888.3	RefSeq	CDS	5857445	5858200	.	-	0	ID=cds5337;Parent=gene5443;Dbxref=Genbank:NP_629527.1,GeneID:1100828;Name=NP_629527.1;Note=2SC6G5.32c%2C conserved hypothetical protein%2C len: 251 aa%3B similar to many eg. SW:Q10634 (Y036_MYCTU) hypothetical protein from Mycobacterium tuberculosis (226 aa) fasta scores%3B opt: 1161%2C z-score: 1353.2%2C E(): 0%2C 76.1%25 identity in 226 aa overlap. Contains Pfam match to entry PF01939 DUF91%2C Protein of unknown function.;gbkey=CDS;gene=2SC6G5.32c;product=hypothetical protein;protein_id=NP_629527.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5857448	5858116	.	-	.	ID=id7010;Dbxref=GeneID:1100828;Note=Pfam match to entry PF01939 DUF91%2C Protein of unknown function%2C score 402.20%2C E-value 4.9e-117;gbkey=misc_feature;gene=2SC6G5.32c
NC_003888.3	RefSeq	gene	5858397	5858789	.	+	.	ID=gene5444;Dbxref=GeneID:1100829;Name=2SC6G5.33;gbkey=Gene;gene=2SC6G5.33;gene_biotype=protein_coding;gene_synonym=2SC6G5.33;locus_tag=SCO5389
NC_003888.3	RefSeq	CDS	5858397	5858789	.	+	0	ID=cds5338;Parent=gene5444;Dbxref=Genbank:NP_629528.1,GeneID:1100829;Name=NP_629528.1;Note=2SC6G5.33%2C unknown%2C len: 130 aa;gbkey=CDS;gene=2SC6G5.33;product=hypothetical protein;protein_id=NP_629528.1;transl_table=11
NC_003888.3	RefSeq	gene	5858868	5859896	.	-	.	ID=gene5445;Dbxref=GeneID:1100830;Name=2SC6G5.34c;gbkey=Gene;gene=2SC6G5.34c;gene_biotype=protein_coding;gene_synonym=2SC6G5.34c;locus_tag=SCO5390
NC_003888.3	RefSeq	CDS	5858868	5859896	.	-	0	ID=cds5339;Parent=gene5445;Dbxref=Genbank:NP_629529.1,GeneID:1100830;Name=NP_629529.1;Note=2SC6G5.34c%2C possible alkanal monooxygenase (luciferase)%2C len: 342aa%3B similar to luciferase alpha chain from many eg. SW:P19839 (LXA1_PHOLU) alkanal monooxygenase alpha chain (EC 1.14.14.3) (bacterial luciferase alpha chain) from Photorhabdus luminescens (Xenorhabdus luminescens) (360 aa) fasta scores%3B opt: 442%2C z-score: 520.4%2C E(): 1.6e-21%2C 30.1%25 identity in 359 aa overlap. Contains Pfam match to entry PF00296 bac_luciferase%2C Bacterial luciferase.;gbkey=CDS;gene=2SC6G5.34c;product=alkanal monooxygenase;protein_id=NP_629529.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5859309	5859896	.	-	.	ID=id7011;Dbxref=GeneID:1100830;Note=Pfam match to entry PF00296 bac_luciferase%2C Bacterial luciferase%2C score 102.10%2C E-value 4.6e-32;gbkey=misc_feature;gene=2SC6G5.34c
NC_003888.3	RefSeq	gene	5860153	5860485	.	+	.	ID=gene5446;Dbxref=GeneID:1100831;Name=2SC6G5.35;gbkey=Gene;gene=2SC6G5.35;gene_biotype=protein_coding;gene_synonym=2SC6G5.35;locus_tag=SCO5391
NC_003888.3	RefSeq	CDS	5860153	5860485	.	+	0	ID=cds5340;Parent=gene5446;Dbxref=Genbank:NP_629530.1,GeneID:1100831;Name=NP_629530.1;Note=2SC6G5.35%2C possible ATP/GTP-binding protein%2C doubtful CDS%2C len: 110aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=2SC6G5.35;product=ATP/GTP-binding protein;protein_id=NP_629530.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5860291	5860314	.	+	.	ID=id7012;Dbxref=GeneID:1100831;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC6G5.35
NC_003888.3	RefSeq	gene	5860494	5861363	.	-	.	ID=gene5447;Dbxref=GeneID:1100832;Name=2SC6G5.36c;gbkey=Gene;gene=2SC6G5.36c;gene_biotype=protein_coding;gene_synonym=2SC6G5.36c;locus_tag=SCO5392
NC_003888.3	RefSeq	CDS	5860494	5861363	.	-	0	ID=cds5341;Parent=gene5447;Dbxref=Genbank:NP_629531.1,GeneID:1100832;Name=NP_629531.1;Note=2SC6G5.36c%2C possible ABC transporter integral membrane subunit%2C len: 289aa%3B similar to many membrane proteins of eg. TR:O86630 (EMBL:AL031155) probable integral membrane protein from Streptomyces coelicolor (279 aa) fasta scores%3B opt: 424%2C z-score: 479.6%2C E(): 3.1e-19%2C 33.9%25 identity in 274 aa overlap. Contains possible membrane-spanning hydrophobic regions and lies immediately downstream of a possible ABC transporter ATP-binding subunit.;gbkey=CDS;gene=2SC6G5.36c;product=ABC transporter;protein_id=NP_629531.1;transl_table=11
NC_003888.3	RefSeq	gene	5861360	5862631	.	-	.	ID=gene5448;Dbxref=GeneID:1100833;Name=2SC6G5.37c;gbkey=Gene;gene=2SC6G5.37c;gene_biotype=protein_coding;gene_synonym=2SC6G5.37c;locus_tag=SCO5393
NC_003888.3	RefSeq	CDS	5861360	5862631	.	-	0	ID=cds5342;Parent=gene5448;Dbxref=Genbank:NP_629532.1,GeneID:1100833;Name=NP_629532.1;Note=2SC6G5.37c%2C possible ABC transporter ATP-binding subunit%2C len: 423aa%3B similar to many eg. TR:Q9S6T6 (EMBL:AL035654) ABC transporter ATP-binding protein from Streptomyces coelicolor (317 aa) fasta scores%3B opt: 1132%2C z-score: 771.9%2C E(): 0%2C 60.2%25 identity in 309 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=2SC6G5.37c;product=ABC transporter ATP-binding protein;protein_id=NP_629532.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5862023	5862553	.	-	.	ID=id7013;Dbxref=GeneID:1100833;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 153.40%2C E-value 3.8e-42;gbkey=misc_feature;gene=2SC6G5.37c
NC_003888.3	RefSeq	sequence_feature	5862509	5862532	.	-	.	ID=id7014;Dbxref=GeneID:1100833;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC6G5.37c
NC_003888.3	RefSeq	gene	5862780	5863556	.	-	.	ID=gene5449;Dbxref=GeneID:1100834;Name=2SC6G5.38c;gbkey=Gene;gene=2SC6G5.38c;gene_biotype=protein_coding;gene_synonym=2SC6G5.38c;locus_tag=SCO5394
NC_003888.3	RefSeq	CDS	5862780	5863556	.	-	0	ID=cds5343;Parent=gene5449;Dbxref=Genbank:NP_629533.1,GeneID:1100834;Name=NP_629533.1;Note=2SC6G5.38c%2C possible ABC transporter integral membrane subunit%2C len: 256aa%3B similar to many membrane proteins of eg. TR:O86630 (EMBL:AL031155) probable integral membrane protein from Streptomyces coelicolor (279 aa) fasta scores%3B opt: 504%2C z-score: 572.6%2C E(): 2e-24%2C 37.6%25 identity in 258 aa overlap.. Contains possible membrane-spanning hydrophobic regions and lies immediately downstream of a possible ABC transporter ATP-binding subunit.;gbkey=CDS;gene=2SC6G5.38c;product=ABC transporter;protein_id=NP_629533.1;transl_table=11
NC_003888.3	RefSeq	gene	5863553	5864593	.	-	.	ID=gene5450;Dbxref=GeneID:1100835;Name=2SC6G5.39c;gbkey=Gene;gene=2SC6G5.39c;gene_biotype=protein_coding;gene_synonym=2SC6G5.39c;locus_tag=SCO5395
NC_003888.3	RefSeq	CDS	5863553	5864593	.	-	0	ID=cds5344;Parent=gene5450;Dbxref=Genbank:NP_629534.1,GeneID:1100835;Name=NP_629534.1;Note=2SC6G5.39c%2C possible ABC transporter ATP-binding subunit%2C len: 346aa%3B similar to many eg. TR:Q9S6T6 (EMBL:AL035654) ABC transporter ATP-binding protein from Streptomyces coelicolor (317 aa) fasta scores%3B opt: 1180%2C z-score: 1223.8%2C E(): 0%2C 58.5%25 identity in 316 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=2SC6G5.39c;product=ABC transporter ATP-binding protein;protein_id=NP_629534.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5863937	5864467	.	-	.	ID=id7015;Dbxref=GeneID:1100835;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 142.30%2C E-value 8.6e-39;gbkey=misc_feature;gene=2SC6G5.39c
NC_003888.3	RefSeq	sequence_feature	5864423	5864446	.	-	.	ID=id7016;Dbxref=GeneID:1100835;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=2SC6G5.39c
NC_003888.3	RefSeq	gene	5864669	5865601	.	-	.	ID=gene5451;Dbxref=GeneID:1100836;Name=2SC6G5.40c;gbkey=Gene;gene=2SC6G5.40c;gene_biotype=protein_coding;gene_synonym=2SC6G5.40c;locus_tag=SCO5396
NC_003888.3	RefSeq	CDS	5864669	5865601	.	-	0	ID=cds5345;Parent=gene5451;Dbxref=Genbank:NP_629535.1,GeneID:1100836;Name=NP_629535.1;Note=2SC6G5.40c%2C probable cellulose-binding protein%2C len: 310aa%3B strongly similar to TR: (EMBL:) AbpS avicel-binding protein from Streptomyces reticuli (311 aa) fasta scores%3B opt: 1777%2C z-score: 1598.0%2C E(): 0%2C 93.2%25 identity in 311 aa overlap. Contains a possible membrane-spanning hydrophobic region close to the N-terminus and possible coiled-coil regions throughout.;gbkey=CDS;gene=2SC6G5.40c;product=cellulose-binding protein;protein_id=NP_629535.1;transl_table=11
NC_003888.3	RefSeq	gene	5865809	5869789	.	-	.	ID=gene5452;Dbxref=GeneID:1100837;Name=SC8F4.01c;gbkey=Gene;gene=SC8F4.01c;gene_biotype=protein_coding;gene_synonym=SC8F4.01c;locus_tag=SCO5397
NC_003888.3	RefSeq	CDS	5865809	5869789	.	-	0	ID=cds5346;Parent=gene5452;Dbxref=Genbank:NP_629536.1,GeneID:1100837;Name=NP_629536.1;Note=SC8F4.01c%2C large Ala/Glu-rich protein%2C len: 1326 aa%3B hydrophilic with strong potential for coiled-coil structure throughout.;gbkey=CDS;gene=SC8F4.01c;product=large Ala/Glu-rich protein;protein_id=NP_629536.1;transl_table=11
NC_003888.3	RefSeq	gene	5870023	5870463	.	-	.	ID=gene5453;Dbxref=GeneID:1100838;Name=SC8F4.02c;gbkey=Gene;gene=SC8F4.02c;gene_biotype=protein_coding;gene_synonym=SC8F4.02c;locus_tag=SCO5398
NC_003888.3	RefSeq	CDS	5870023	5870463	.	-	0	ID=cds5347;Parent=gene5453;Dbxref=Genbank:NP_629537.1,GeneID:1100838;Name=NP_629537.1;Note=SC8F4.02c%2C conserved hypothetical protein%2C len: 146aa%3B similar to several of undefined function eg. TR:O28065 (EMBL:AE000952) conserved hypothetical protein from Archaeoglobus fulgidus (131 aa) fasta scores%3B opt: 346 z-score: 449.3 E(): 1.3e-17 40.4%25 identity in 136 aa overlap.;gbkey=CDS;gene=SC8F4.02c;product=hypothetical protein;protein_id=NP_629537.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5870597	5870604	.	+	.	ID=id7017;gbkey=RBS
NC_003888.3	RefSeq	gene	5870613	5871818	.	+	.	ID=gene5454;Dbxref=GeneID:1100839;Name=SC8F4.03;gbkey=Gene;gene=SC8F4.03;gene_biotype=protein_coding;gene_synonym=SC8F4.03;locus_tag=SCO5399
NC_003888.3	RefSeq	CDS	5870613	5871818	.	+	0	ID=cds5348;Parent=gene5454;Dbxref=Genbank:NP_629538.1,GeneID:1100839;Name=NP_629538.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B in Rhizobia and Ralstonia is involved in PHB biosynthesis;gbkey=CDS;gene=SC8F4.03;product=acetyl-CoA acetyltransferase;protein_id=NP_629538.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5870631	5871809	.	+	.	ID=id7018;Dbxref=GeneID:1100839;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2C score 715.90%2C E-value 1.9e-211.;gbkey=misc_feature;gene=SC8F4.03
NC_003888.3	RefSeq	sequence_feature	5870880	5870936	.	+	.	ID=id7019;Dbxref=GeneID:1100839;Note=PS00098 Thiolases acyl-enzyme intermediate signature;gbkey=misc_feature;gene=SC8F4.03
NC_003888.3	RefSeq	sequence_feature	5871645	5871695	.	+	.	ID=id7020;Dbxref=GeneID:1100839;Note=PS00737 Thiolases signature 2.;gbkey=misc_feature;gene=SC8F4.03
NC_003888.3	RefSeq	sequence_feature	5871750	5871791	.	+	.	ID=id7021;Dbxref=GeneID:1100839;Note=PS00099 Thiolases active site;gbkey=misc_feature;gene=SC8F4.03
NC_003888.3	RefSeq	ribosome_entry_site	5871844	5871851	.	+	.	ID=id7022;gbkey=RBS
NC_003888.3	RefSeq	gene	5871855	5872811	.	+	.	ID=gene5455;Dbxref=GeneID:1100840;Name=SC8F4.04;gbkey=Gene;gene=SC8F4.04;gene_biotype=protein_coding;gene_synonym=SC8F4.04;locus_tag=SCO5400
NC_003888.3	RefSeq	CDS	5871855	5872811	.	+	0	ID=cds5349;Parent=gene5455;Dbxref=Genbank:NP_629539.1,GeneID:1100840;Name=NP_629539.1;Note=SC8F4.04%2C possible transport system kinase%2C len: 318 aa%3B similar to SW:P27254 (ARGK_ECOLI) LAO/AO transport system kinase from Escherichia coli. Thought to phosphorylate the LAO/AO periplasmic binding proteins. (331 aa) fasta scores%3B opt: 562%2C z-score: 600.4%2C E(): 4.9e-26%2C35.1%25 identity in 271 aa overlap.;gbkey=CDS;gene=SC8F4.04;product=transport system kinase;protein_id=NP_629539.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5873139	5873143	.	+	.	ID=id7023;gbkey=RBS
NC_003888.3	RefSeq	gene	5873153	5874457	.	+	.	ID=gene5456;Dbxref=GeneID:1100841;Name=SC8F4.05;gbkey=Gene;gene=SC8F4.05;gene_biotype=protein_coding;gene_synonym=SC8F4.05;locus_tag=SCO5401
NC_003888.3	RefSeq	CDS	5873153	5874457	.	+	0	ID=cds5350;Parent=gene5456;Dbxref=Genbank:NP_629540.1,GeneID:1100841;Name=NP_629540.1;Note=SC8F4.05%2C probable integral membrane protein%2C len: 434aa%3B similar to many proposed transport proteins eg. TR:CAB59494 (EMBL:AL132648) transport proteins from Streptomyces coelicolor (405 aa) fasta scores%3B opt: 529%2C z-score: 545.1%2C E(): 5.9e-23%2C 35.2%25 identity in 392 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SC8F4.05;product=hypothetical protein;protein_id=NP_629540.1;transl_table=11
NC_003888.3	RefSeq	gene	5874400	5875173	.	-	.	ID=gene5457;Dbxref=GeneID:1100842;Name=SC8F4.06c;gbkey=Gene;gene=SC8F4.06c;gene_biotype=protein_coding;gene_synonym=SC8F4.06c;locus_tag=SCO5402
NC_003888.3	RefSeq	CDS	5874400	5875173	.	-	0	ID=cds5351;Parent=gene5457;Dbxref=Genbank:NP_629541.1,GeneID:1100842;Name=NP_629541.1;Note=SC8F4.06c%2C Asp-rich hydrophilic protein ( membrane protein)%2C len: 257 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC8F4.06c;product=hypothetical protein;protein_id=NP_629541.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5875181	5875185	.	-	.	ID=id7024;gbkey=RBS
NC_003888.3	RefSeq	gene	5875298	5875966	.	+	.	ID=gene5458;Dbxref=GeneID:1100843;Name=SC8F4.07;gbkey=Gene;gene=SC8F4.07;gene_biotype=protein_coding;gene_synonym=SC8F4.07;locus_tag=SCO5403
NC_003888.3	RefSeq	CDS	5875298	5875966	.	+	0	ID=cds5352;Parent=gene5458;Dbxref=Genbank:NP_629542.1,GeneID:1100843;Name=NP_629542.1;Note=SC8F4.07%2C probable two-component system response regulator%2C len: 222 aa%3B similar to many e.g. SW:Q02540 (COPR_PSESM) CopR transcriptional activator protein from Pseudomonas syringae (pv. tomato) (227 aa) fasta scores%3B opt: 621%2C z-score: 735.4%2C E(): 0%2C 45.7%25 identity in 223 aa overlap. Contains a Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal.;gbkey=CDS;gene=SC8F4.07;product=two-component system response regulator;protein_id=NP_629542.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5875298	5875633	.	+	.	ID=id7025;Dbxref=GeneID:1100843;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 120.30%2C E-value 3.7e-32;gbkey=misc_feature;gene=SC8F4.07
NC_003888.3	RefSeq	sequence_feature	5875739	5875942	.	+	.	ID=id7026;Dbxref=GeneID:1100843;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 76.30%2C E-value 1.8e-21;gbkey=misc_feature;gene=SC8F4.07
NC_003888.3	RefSeq	ribosome_entry_site	5875951	5875954	.	+	.	ID=id7027;Dbxref=GeneID:1100843;gbkey=RBS;gene=SC8F4.07
NC_003888.3	RefSeq	gene	5875963	5877399	.	+	.	ID=gene5459;Dbxref=GeneID:1100844;Name=SC8F4.08;gbkey=Gene;gene=SC8F4.08;gene_biotype=protein_coding;gene_synonym=SC8F4.08;locus_tag=SCO5404
NC_003888.3	RefSeq	CDS	5875963	5877399	.	+	0	ID=cds5353;Parent=gene5459;Dbxref=Genbank:NP_629543.1,GeneID:1100844;Name=NP_629543.1;Note=SC8F4.08%2C probable two-component sensor kinase%2C len: 478 aa%3B similar to many proposed two-component sensor kinases eg. SW:P18392 (RSTB_ECOLI) sensor protein RstB from Escherichia coli (433 aa) fasta scores%3B opt: 379%2C z-score: 410.8%2C E(): 1.8e-15%2C 35.6%25 identity in 239 aa overlap. Contains Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins and Pfam match to entry PF00512 signal%2C Histidine kinase.;gbkey=CDS;gene=SC8F4.08;product=two-component sensor kinase;protein_id=NP_629543.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5876524	5876739	.	+	.	ID=id7028;Dbxref=GeneID:1100844;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 41.80%2C E-value 1.5e-08;gbkey=misc_feature;gene=SC8F4.08
NC_003888.3	RefSeq	sequence_feature	5876779	5877366	.	+	.	ID=id7029;Dbxref=GeneID:1100844;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 143.30%2C E-value 4.4e-39;gbkey=misc_feature;gene=SC8F4.08
NC_003888.3	RefSeq	gene	5877408	5877884	.	-	.	ID=gene5460;Dbxref=GeneID:1100845;Name=SC8F4.09c;gbkey=Gene;gene=SC8F4.09c;gene_biotype=protein_coding;gene_synonym=SC8F4.09c;locus_tag=SCO5405
NC_003888.3	RefSeq	CDS	5877408	5877884	.	-	0	ID=cds5354;Parent=gene5460;Dbxref=Genbank:NP_629544.1,GeneID:1100845;Name=NP_629544.1;Note=SC8F4.09c%2C probable transcriptional regulator%2C len: 158 aa%3B similar to many e.g. TR:Q9X5U1 (EMBL:AF127374) from Streptomyces lavendulae (163 aa) fasta scores%3B opt: 382%2C z-score: 481.8%2C E(): 2e-19%2C 43.4%25 identity in 152 aa overlap and SW:P42195 (PECS_ERWCH) regulatory protein PecS from Erwinia chrysanthemi fasta scores%3B opt: 172%2C z-score: 225.1%2C E(): 3.9e-05%2C 28.7%25 identity in 136 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and helix-turn-helix motif Score 1270 (+3.51 SD) in ID at residue 60.;gbkey=CDS;gene=SC8F4.09c;product=transcriptional regulator;protein_id=NP_629544.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5877444	5877764	.	-	.	ID=id7030;Dbxref=GeneID:1100845;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 60.20%2C E-value 4.3e-14;gbkey=misc_feature;gene=SC8F4.09c
NC_003888.3	RefSeq	ribosome_entry_site	5877894	5877899	.	-	.	ID=id7031;gbkey=RBS
NC_003888.3	RefSeq	gene	5877986	5878762	.	-	.	ID=gene5461;Dbxref=GeneID:1100846;Name=SC8F4.10c;gbkey=Gene;gene=SC8F4.10c;gene_biotype=protein_coding;gene_synonym=SC8F4.10c;locus_tag=SCO5406
NC_003888.3	RefSeq	CDS	5877986	5878762	.	-	0	ID=cds5355;Parent=gene5461;Dbxref=Genbank:NP_629545.1,GeneID:1100846;Name=NP_629545.1;Note=SC8F4.10c%2C hypothetical protein%2C len: 258 aa%3B similar to TR:AAF10203 (EMBL:AE001920) hypothetical protein from Deinococcus radiodurans (254 aa) fasta scores%3B opt: 157%2C z-score: 174.0%2C E(): 0.028%2C 27.8%25 identity in 245 aa overlap. Also weakly similar to the neighbouring hypothetical CDSs SC8F4.11c and SC8F4.12c.;gbkey=CDS;gene=SC8F4.10c;product=hypothetical protein;protein_id=NP_629545.1;transl_table=11
NC_003888.3	RefSeq	gene	5878759	5879418	.	-	.	ID=gene5462;Dbxref=GeneID:1100847;Name=SC8F4.11c;gbkey=Gene;gene=SC8F4.11c;gene_biotype=protein_coding;gene_synonym=SC8F4.11c;locus_tag=SCO5407
NC_003888.3	RefSeq	CDS	5878759	5879418	.	-	0	ID=cds5356;Parent=gene5462;Dbxref=Genbank:NP_629546.1,GeneID:1100847;Name=NP_629546.1;Note=SC8F4.11c%2C hypothetical protein%2C len: 219 aa%3B weakly similar to many e.g. TR:AAF10203 (EMBL:AE00192) hypothetical protein from Deinococcus radiodurans (254 aa) fasta scores%3B opt: 388%2C z-score: 453.5%2C E(): 7.5e-18%2C 36.9%25 identity in 214 aa overlap. Also weakly similar to the neighbouring hypothetical CDSs SC8F4.10c and SC8F4.12c;gbkey=CDS;gene=SC8F4.11c;product=hypothetical protein;protein_id=NP_629546.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5878770	5878774	.	-	.	ID=id7032;Dbxref=GeneID:1100847;gbkey=RBS;gene=SC8F4.11c
NC_003888.3	RefSeq	gene	5879411	5880130	.	-	.	ID=gene5463;Dbxref=GeneID:1100848;Name=SC8F4.12c;gbkey=Gene;gene=SC8F4.12c;gene_biotype=protein_coding;gene_synonym=SC8F4.12c;locus_tag=SCO5408
NC_003888.3	RefSeq	CDS	5879411	5880130	.	-	0	ID=cds5357;Parent=gene5463;Dbxref=Genbank:NP_629547.1,GeneID:1100848;Name=NP_629547.1;Note=SC8F4.12c%2C hypothetical protein%2C len: 239 aa%3B weakly similar to many e.g. TR:AAF10203 (EMBL:AE00192) hypothetical protein from Deinococcus radiodurans (254 aa) fasta scores%3B opt: 441%2C z-score: 528.2%2C E(): 5.1e-22%2C 33.2%25 identity in 202 aa overlap. Also weakly similar to the neighbouring hypothetical CDSs SC8F4.10c and SC8F4.11c;gbkey=CDS;gene=SC8F4.12c;product=hypothetical protein;protein_id=NP_629547.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5879419	5879423	.	-	.	ID=id7033;Dbxref=GeneID:1100848;gbkey=RBS;gene=SC8F4.12c
NC_003888.3	RefSeq	ribosome_entry_site	5880218	5880223	.	+	.	ID=id7034;gbkey=RBS
NC_003888.3	RefSeq	gene	5880228	5880572	.	+	.	ID=gene5464;Dbxref=GeneID:1100849;Name=SC8F4.13;gbkey=Gene;gene=SC8F4.13;gene_biotype=protein_coding;gene_synonym=SC8F4.13;locus_tag=SCO5409
NC_003888.3	RefSeq	CDS	5880228	5880572	.	+	0	ID=cds5358;Parent=gene5464;Dbxref=Genbank:NP_629548.1,GeneID:1100849;Name=NP_629548.1;Note=SC8F4.13%2C membrane protein%2C len: 114 aa%3B similar to TR:O31485 (EMBL:Z99106) hypothetical protein from Bacillus subtilis (96 aa) fasta scores%3B opt: 179%2C z-score: 259.7%2C E(): 4.7e-07%2C 37.4%25 identity in 91 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8F4.13;product=hypothetical protein;protein_id=NP_629548.1;transl_table=11
NC_003888.3	RefSeq	gene	5880887	5881012	.	-	.	ID=gene5465;Dbxref=GeneID:1100850;Name=SC8F4.14c;gbkey=Gene;gene=SC8F4.14c;gene_biotype=protein_coding;gene_synonym=SC8F4.14c;locus_tag=SCO5410
NC_003888.3	RefSeq	CDS	5880887	5881012	.	-	0	ID=cds5359;Parent=gene5465;Dbxref=Genbank:NP_629549.1,GeneID:1100850;Name=NP_629549.1;Note=SC8F4.14c%2C hypothetical protein%2C improbable%2C len: 41 aa;gbkey=CDS;gene=SC8F4.14c;product=hypothetical protein;protein_id=NP_629549.1;transl_table=11
NC_003888.3	RefSeq	gene	5881074	5882480	.	-	.	ID=gene5466;Dbxref=GeneID:1100851;Name=SC8F4.15c;gbkey=Gene;gene=SC8F4.15c;gene_biotype=protein_coding;gene_synonym=SC8F4.15c;locus_tag=SCO5411
NC_003888.3	RefSeq	CDS	5881074	5882480	.	-	0	ID=cds5360;Parent=gene5466;Dbxref=Genbank:NP_629550.1,GeneID:1100851;Name=NP_629550.1;Note=SC8F4.15c%2C possible integrase/recombinase%2C len: 468aa%3B similar to many eg. TR:Q38184 (EMBL:X85213) integrase from Bacteriophage TP901-1 (485 aa) fasta scores%3B opt: 281%2C z-score: 318.4%2C E(): 2.5e-10%2C 26.9%25 identity in 428 aa overlap. Contains Pfam match to entry PF00239 recombinase%2C Site-specific recombinases and 2x tta Leu codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SC8F4.15c;product=integrase/recombinase;protein_id=NP_629550.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5882049	5882249	.	-	.	ID=id7035;Dbxref=GeneID:1100851;Note=Pfam match to entry PF00239 recombinase%2C Site-specific recombinases%2C score 45.60%2C E-value 1.3e-11;gbkey=misc_feature;gene=SC8F4.15c
NC_003888.3	RefSeq	sequence_feature	5882367	5882369	.	-	.	ID=id7036;Dbxref=GeneID:1100851;Note=tta Leu codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC8F4.15c
NC_003888.3	RefSeq	sequence_feature	5882430	5882432	.	-	.	ID=id7037;Dbxref=GeneID:1100851;Note=tta Leu codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC8F4.15c
NC_003888.3	RefSeq	ribosome_entry_site	5882505	5882511	.	+	.	ID=id7038;gbkey=RBS
NC_003888.3	RefSeq	gene	5882513	5882656	.	+	.	ID=gene5467;Dbxref=GeneID:1100852;Name=SC8F4.16;gbkey=Gene;gene=SC8F4.16;gene_biotype=protein_coding;gene_synonym=SC8F4.16;locus_tag=SCO5412
NC_003888.3	RefSeq	CDS	5882513	5882656	.	+	0	ID=cds5361;Parent=gene5467;Dbxref=Genbank:NP_629551.1,GeneID:1100852;Name=NP_629551.1;Note=SC8F4.16%2C hypothetical protein%2C len: 47 aa%3B similar to SW:O07734 (YC20_MYCTU) hypothetical protein from Mycobacterium tuberculosis (102 aa) fasta scores%3B opt: 193%2C z-score: 304.2%2C E(): 1.5e-09%2C 71.1%25 identity in 45 aa overlap.;gbkey=CDS;gene=SC8F4.16;product=hypothetical protein;protein_id=NP_629551.1;transl_table=11
NC_003888.3	RefSeq	gene	5882733	5883242	.	+	.	ID=gene5468;Dbxref=GeneID:1100853;Name=SC8F4.17;gbkey=Gene;gene=SC8F4.17;gene_biotype=protein_coding;gene_synonym=SC8F4.17;locus_tag=SCO5413
NC_003888.3	RefSeq	CDS	5882733	5883242	.	+	0	ID=cds5362;Parent=gene5468;Dbxref=Genbank:NP_629552.1,GeneID:1100853;Name=NP_629552.1;Note=SC8F4.17%2C possible transcriptional regulator%2C len: 169 aa%3B similar to many proposed transcriptional regulators e.g. TR:CAB62730 (EMBL:AL133423) MarR-family transcriptional regulator from Streptomyces coelicolor (151 aa) fasta scores%3B opt: 184%2C z-score: 242.7%2C E(): 4.1e-06%2C 35.1%25 identity in 111 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family.;gbkey=CDS;gene=SC8F4.17;product=MarR-transcriptional regulator;protein_id=NP_629552.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5882895	5883209	.	+	.	ID=id7039;Dbxref=GeneID:1100853;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 66.70%2C E-value 5e-16;gbkey=misc_feature;gene=SC8F4.17
NC_003888.3	RefSeq	sequence_feature	5883184	5886188	.	+	.	ID=id7040;Note=Region previously sequenced as EMBL:AJ237976 Streptomyces coelicolor icmA gene for isobutyryl-CoA mutase A%2C ORF1 and ORF2.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5883333	5883662	.	+	.	ID=gene5469;Dbxref=GeneID:1100854;Name=SC8F4.18;gbkey=Gene;gene=SC8F4.18;gene_biotype=protein_coding;gene_synonym=SC8F4.18;locus_tag=SCO5414
NC_003888.3	RefSeq	CDS	5883333	5883662	.	+	0	ID=cds5363;Parent=gene5469;Dbxref=Genbank:NP_629553.1,GeneID:1100854;Name=NP_629553.1;Note=SC8F4.18%2C membrane protein%2C len: 109 aa%3B previously sequenced therefore identical to TR:Q9X948 (EMBL:AJ237976). Also similar to SW:Z75555 (Y076_MYCTU) hypothetical protein from Mycobacterium tuberculosis (120 aa) fasta scores%3B opt: 248%2C z-score: 330.5%2C E(): 5.3e-11%2C 37.5%25 identity in 96 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8F4.18;product=hypothetical protein;protein_id=NP_629553.1;transl_table=11
NC_003888.3	RefSeq	gene	5883756	5885456	.	+	.	ID=gene5470;Dbxref=GeneID:1100855;Name=icmA;gbkey=Gene;gene=icmA;gene_biotype=protein_coding;gene_synonym=icmA,SC8F4.19;locus_tag=SCO5415
NC_003888.3	RefSeq	CDS	5883756	5885456	.	+	0	ID=cds5364;Parent=gene5470;Dbxref=Genbank:NP_629554.1,GeneID:1100855;Name=NP_629554.1;Note=SC8F4.19%2C icmA%2C isobutyryl-CoA mutase A%2C len: 566 aa%3B previously sequenced and characterised as TR:Q9X949 (EMBL:AJ237976). Contains Pfam match to entry PF01642 MM_CoA_mutase%2C Methylmalonyl-CoA mutase.;gbkey=CDS;gene=icmA;product=isobutyryl-CoA mutase A;protein_id=NP_629554.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5883951	5885453	.	+	.	ID=id7041;Dbxref=GeneID:1100855;Note=Pfam match to entry PF01642 MM_CoA_mutase%2C Methylmalonyl-CoA mutase%2C score 920.50%2C E-value 4.7e-273;gbkey=misc_feature;gene=icmA
NC_003888.3	RefSeq	gene	5885486	5886499	.	-	.	ID=gene5471;Dbxref=GeneID:1100856;Name=SC8F4.20c;gbkey=Gene;gene=SC8F4.20c;gene_biotype=protein_coding;gene_synonym=SC8F4.20c;locus_tag=SCO5416
NC_003888.3	RefSeq	CDS	5885486	5886499	.	-	0	ID=cds5365;Parent=gene5471;Dbxref=Genbank:NP_629555.1,GeneID:1100856;Name=NP_629555.1;Note=SC8F4.20c%2C probable transcriptional regulator%2C len: 337 aa%3B previously partially sequenced therefore identical to TR:Q9X950 (EMBL:AJ237976). Similar to many proposed transcriptional regulators eg. TR:CAB61299 (EMBL:AL132991) AraC-family transcriptional regulator from Streptomyces coelicolor (311 aa) fasta scores%3B opt: 859%2C z-score: 986.2%2C E(): 0%2C 47.8%25 identity in 312 aa overlap. Contains Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family;gbkey=CDS;gene=SC8F4.20c;product=transcriptional regulator;protein_id=NP_629555.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5885504	5885764	.	-	.	ID=id7042;Dbxref=GeneID:1100856;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 87.30%2C E-value 3.1e-22;gbkey=misc_feature;gene=SC8F4.20c
NC_003888.3	RefSeq	gene	5886533	5887552	.	+	.	ID=gene5472;Dbxref=GeneID:1100857;Name=SC8F4.21;gbkey=Gene;gene=SC8F4.21;gene_biotype=protein_coding;gene_synonym=SC8F4.21;locus_tag=SCO5417
NC_003888.3	RefSeq	CDS	5886533	5887552	.	+	0	ID=cds5366;Parent=gene5472;Dbxref=Genbank:NP_629556.1,GeneID:1100857;Name=NP_629556.1;Note=SC8F4.21%2C possible zinc-binding oxidoreductase%2C len: 339aa%3B similar to many proposed oxidoreductases eg. TR:O85702 (EMBL:AF072709) oxidoreductase from Streptomyces lividans (313 aa) fasta scores%3B opt: 1311%2C z-score: 1369.8%2C E(): 0%2C 66.1%25 identity in 310 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and Prosite match to PS01162 Quinone oxidoreductase / zeta-crystallin signature.;gbkey=CDS;gene=SC8F4.21;product=zinc-binding oxidoreductase;protein_id=NP_629556.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5886641	5887543	.	+	.	ID=id7043;Dbxref=GeneID:1100857;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 38.90%2C E-value 7.7e-12;gbkey=misc_feature;gene=SC8F4.21
NC_003888.3	RefSeq	sequence_feature	5887049	5887114	.	+	.	ID=id7044;Dbxref=GeneID:1100857;Note=PS01162 Quinone oxidoreductase / zeta-crystallin signature;gbkey=misc_feature;gene=SC8F4.21
NC_003888.3	RefSeq	gene	5887579	5888283	.	-	.	ID=gene5473;Dbxref=GeneID:1100858;Name=SC8F4.22c;gbkey=Gene;gene=SC8F4.22c;gene_biotype=protein_coding;gene_synonym=SC8F4.22c;locus_tag=SCO5418
NC_003888.3	RefSeq	CDS	5887579	5888283	.	-	0	ID=cds5367;Parent=gene5473;Dbxref=Genbank:NP_629557.1,GeneID:1100858;Name=NP_629557.1;Note=SC8F4.22c%2C possible transcriptional regulator%2C len: 234aa%3B similar to many eg. TR:Q54288 (EMBL:X86780) regulator of antibiotic transport complexes from Streptomyces hygroscopicus (204 aa) fasta scores%3B opt: 284%2C z-score: 301.4%2C E(): 2.2e-09%2C 31.3%25 identity in 211 aa overlap. Contains helix-turn-helix motif Score 1083 (+2.88 SD) in ID at residue 38.;gbkey=CDS;gene=SC8F4.22c;product=transcriptional regulator;protein_id=NP_629557.1;transl_table=11
NC_003888.3	RefSeq	gene	5888587	5889543	.	+	.	ID=gene5474;Dbxref=GeneID:1100859;Name=SC8F4.23;gbkey=Gene;gene=SC8F4.23;gene_biotype=protein_coding;gene_synonym=SC8F4.23,trxA4;locus_tag=SCO5419
NC_003888.3	RefSeq	CDS	5888587	5889543	.	+	0	ID=cds5368;Parent=gene5474;Dbxref=Genbank:NP_629558.1,GeneID:1100859;Name=NP_629558.1;Note=SC8F4.23%2C trxA4%2C possible thioredoxin%2C len: 318aa%3B similar to many e.g. SW:P00275 (THI1_CORNE) thioredoxin C-1 from Corynebacterium nephridii (105 aa) fasta scores%3B opt: 297%2C z-score: 317.6%2C E(): 2.8e-10%2C 44.3%25 identity in 97 aa overlap. Contains Pfam match to entry PF00085 thiored%2C Thioredoxin and Prosite match to PS00194 Thioredoxin family active site.;gbkey=CDS;gene=SC8F4.23;product=thioredoxin;protein_id=NP_629558.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5888701	5889030	.	+	.	ID=id7045;Dbxref=GeneID:1100859;Note=Pfam match to entry PF00085 thiored%2C Thioredoxin%2C score 86.70%2C E-value 7.8e-25;gbkey=misc_feature;gene=SC8F4.23
NC_003888.3	RefSeq	sequence_feature	5888776	5888832	.	+	.	ID=id7046;Dbxref=GeneID:1100859;Note=PS00194 Thioredoxin family active site;gbkey=misc_feature;gene=SC8F4.23
NC_003888.3	RefSeq	ribosome_entry_site	5890185	5890191	.	+	.	ID=id7047;gbkey=RBS
NC_003888.3	RefSeq	gene	5890196	5890843	.	+	.	ID=gene5475;Dbxref=GeneID:1100860;Name=SC8F4.24;gbkey=Gene;gene=SC8F4.24;gene_biotype=protein_coding;gene_synonym=SC8F4.24;locus_tag=SCO5420
NC_003888.3	RefSeq	CDS	5890196	5890843	.	+	0	ID=cds5369;Parent=gene5475;Dbxref=Genbank:NP_629559.1,GeneID:1100860;Name=NP_629559.1;Note=SC8F4.24%2C che%2C cholesterol esterase%2C len: 215aa%3B strongly similar to TR:Q53425 (EMBL:S71532) che%2C cholesterol esterase from Streptomyces lavendulae (227 aa) fasta scores%3B opt: 632%2C z-score: 735.9%2C E(): 0%2C 51.5%25 identity in 231 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC8F4.24;product=cholesterol esterase;protein_id=NP_629559.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5890945	5890952	.	+	.	ID=id7048;gbkey=RBS
NC_003888.3	RefSeq	gene	5890960	5891517	.	+	.	ID=gene5476;Dbxref=GeneID:1100861;Name=SC8F4.25;gbkey=Gene;gene=SC8F4.25;gene_biotype=protein_coding;gene_synonym=SC8F4.25;locus_tag=SCO5421
NC_003888.3	RefSeq	CDS	5890960	5891517	.	+	0	ID=cds5370;Parent=gene5476;Dbxref=Genbank:NP_629560.1,GeneID:1100861;Name=NP_629560.1;Note=SC8F4.25%2C possible integral membrane protein%2C len: 185 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8F4.25;product=hypothetical protein;protein_id=NP_629560.1;transl_table=11
NC_003888.3	RefSeq	gene	5891522	5892892	.	+	.	ID=gene5477;Dbxref=GeneID:1100862;Name=SC8F4.26;gbkey=Gene;gene=SC8F4.26;gene_biotype=protein_coding;gene_synonym=SC8F4.26;locus_tag=SCO5422
NC_003888.3	RefSeq	CDS	5891522	5892892	.	+	0	ID=cds5371;Parent=gene5477;Dbxref=Genbank:NP_629561.1,GeneID:1100862;Name=NP_629561.1;Note=SC8F4.26%2C hypothetical hydrophilic protein%2C len: 456 aa%3B contains possible coiled-coil region around residue 250;gbkey=CDS;gene=SC8F4.26;product=hypothetical protein;protein_id=NP_629561.1;transl_table=11
NC_003888.3	RefSeq	gene	5892975	5894405	.	-	.	ID=gene5478;Dbxref=GeneID:1100863;Name=pyk2;gbkey=Gene;gene=pyk2;gene_biotype=protein_coding;gene_synonym=pyk2,SC8F4.27c;locus_tag=SCO5423
NC_003888.3	RefSeq	CDS	5892975	5894405	.	-	0	ID=cds5372;Parent=gene5478;Dbxref=Genbank:NP_629562.1,GeneID:1100863;Name=NP_629562.1;Note=SC8F4.27c%2C pyk2%2C pyruvate kinase%2C len: 476 aa%3B strongly similar to many e.g. SW:Q46078 (KPYK_CORGL) pyruvate kinase from Corynebacterium glutamicum (Brevibacterium flavum) (475 aa) fasta scores%3B opt: 1693%2C z-score: 1907.7%2C E(): 0%2C 55.3%25 identity in 474 aa overlap and TRNEW:CAB52070 (EMBL:AL109732) pyruvate kinase from Streptomyces coelicolor (478 aa) fasta scores%3B opt: 2185%2C z-score: 2461.2%2C E(): 0%2C 69.3%25 identity in 473 aa overlap. Contains Pfam match to entry PF00224 PK%2C Pyruvate kinase and Prosite match to PS00110 Pyruvate kinase active site signature.;gbkey=CDS;gene=pyk2;product=pyruvate kinase;protein_id=NP_629562.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5892996	5894402	.	-	.	ID=id7049;Dbxref=GeneID:1100863;Note=Pfam match to entry PF00224 PK%2C Pyruvate kinase%2C score 649.60%2C E-value 1.6e-191;gbkey=misc_feature;gene=pyk2
NC_003888.3	RefSeq	sequence_feature	5893734	5893772	.	-	.	ID=id7050;Dbxref=GeneID:1100863;Note=PS00110 Pyruvate kinase active site signature;gbkey=misc_feature;gene=pyk2
NC_003888.3	RefSeq	gene	5894480	5895703	.	-	.	ID=gene5479;Dbxref=GeneID:1100864;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;gene_synonym=ackA,SC8F4.28c;locus_tag=SCO5424
NC_003888.3	RefSeq	CDS	5894480	5895703	.	-	0	ID=cds5373;Parent=gene5479;Dbxref=Genbank:NP_629563.1,GeneID:1100864;Name=NP_629563.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA;gbkey=CDS;gene=ackA;product=acetate kinase;protein_id=NP_629563.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5894528	5895691	.	-	.	ID=id7051;Dbxref=GeneID:1100864;Note=Pfam match to entry PF00871 Acetate_kinase%2C Acetokinase family%2C score 633.70%2C E-value 9.9e-187;gbkey=misc_feature;gene=ackA
NC_003888.3	RefSeq	sequence_feature	5895653	5895688	.	-	.	ID=id7052;Dbxref=GeneID:1100864;Note=PS01075 Acetate and butyrate kinases family signature 1;gbkey=misc_feature;gene=ackA
NC_003888.3	RefSeq	gene	5895700	5897793	.	-	.	ID=gene5480;Dbxref=GeneID:1100865;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;gene_synonym=pta,SC6A11.01c,SC8F4.29c;locus_tag=SCO5425
NC_003888.3	RefSeq	CDS	5895700	5897793	.	-	0	ID=cds5374;Parent=gene5480;Dbxref=Genbank:NP_733663.1,GeneID:1100865;Name=NP_733663.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;gene=pta;product=phosphate acetyltransferase;protein_id=NP_733663.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5895832	5896698	.	-	.	ID=id7053;Dbxref=GeneID:1100865;Note=Pfam match to entry PF01515 PTA_PTB%2C Phosphate acetyl/butaryl transferase%2C score 460.50%2C E-value 1.4e-134;gbkey=misc_feature;gene=pta
NC_003888.3	RefSeq	ribosome_entry_site	5897801	5897804	.	-	.	ID=id7054;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5897929	5897933	.	+	.	ID=id7055;gbkey=RBS
NC_003888.3	RefSeq	gene	5897944	5898969	.	+	.	ID=gene5481;Dbxref=GeneID:1100866;Name=pfkA2;gbkey=Gene;gene=pfkA2;gene_biotype=protein_coding;gene_synonym=pfkA2,SC6A11.02;locus_tag=SCO5426
NC_003888.3	RefSeq	CDS	5897944	5898969	.	+	0	ID=cds5375;Parent=gene5481;Dbxref=Genbank:NP_629564.1,GeneID:1100866;Name=NP_629564.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;gene=pfkA2;product=6-phosphofructokinase;protein_id=NP_629564.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5897947	5898630	.	+	.	ID=id7056;Dbxref=GeneID:1100866;Note=Pfam match to entry PF00365 PFK%2C Phosphofructokinase%2C score 278.20%2C E-value 1.6e-101;gbkey=misc_feature;gene=pfkA2
NC_003888.3	RefSeq	sequence_feature	5898709	5898843	.	+	.	ID=id7057;Dbxref=GeneID:1100866;Note=Pfam match to entry PF00365 PFK%2C Phosphofructokinase%2C score 52.20%2C E-value 9.9e-19;gbkey=misc_feature;gene=pfkA2
NC_003888.3	RefSeq	sequence_feature	5898739	5898795	.	+	.	ID=id7058;Dbxref=GeneID:1100866;Note=PS00433 Phosphofructokinase signature;gbkey=misc_feature;gene=pfkA2
NC_003888.3	RefSeq	gene	5898979	5899692	.	-	.	ID=gene5482;Dbxref=GeneID:1100867;Name=SC6A11.03c;gbkey=Gene;gene=SC6A11.03c;gene_biotype=protein_coding;gene_synonym=SC6A11.03c;locus_tag=SCO5427
NC_003888.3	RefSeq	CDS	5898979	5899692	.	-	0	ID=cds5376;Parent=gene5482;Dbxref=Genbank:NP_629565.1,GeneID:1100867;Name=NP_629565.1;Note=SC6A11.03c%2C unknown%2C len: 237 aa%3B no significant database similarities;gbkey=CDS;gene=SC6A11.03c;product=hypothetical protein;protein_id=NP_629565.1;transl_table=11
NC_003888.3	RefSeq	gene	5899804	5900694	.	-	.	ID=gene5483;Dbxref=GeneID:1100868;Name=SC6A11.04c;gbkey=Gene;gene=SC6A11.04c;gene_biotype=protein_coding;gene_synonym=SC6A11.04c;locus_tag=SCO5428
NC_003888.3	RefSeq	CDS	5899804	5900694	.	-	0	ID=cds5377;Parent=gene5483;Dbxref=Genbank:NP_629566.1,GeneID:1100868;Name=NP_629566.1;Note=SC6A11.04c%2C possible integral membrane transport protein%2C len: 296aa%3B similar to many proposed transport proteins e.g. TR:Q9X9Y6(EMBL:AL096743) integral membrane transport protein from Streptomyces coelicolor (298 aa) fasta scores: opt: 515%2C z-score: 609.9%2C E(): 1.5e-26%2C 33.9%25 identity in 295 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C Prosite matches to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=SC6A11.04c;product=integral membrane transport protein;protein_id=NP_629566.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5899939	5900163	.	-	.	ID=id7059;Dbxref=GeneID:1100868;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 53.20%2C E-value 5.7e-12;gbkey=misc_feature;gene=SC6A11.04c
NC_003888.3	RefSeq	sequence_feature	5900074	5900160	.	-	.	ID=id7060;Dbxref=GeneID:1100868;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC6A11.04c
NC_003888.3	RefSeq	gene	5900696	5901637	.	-	.	ID=gene5484;Dbxref=GeneID:1100869;Name=SC6A11.05c;gbkey=Gene;gene=SC6A11.05c;gene_biotype=protein_coding;gene_synonym=SC6A11.05c;locus_tag=SCO5429
NC_003888.3	RefSeq	CDS	5900696	5901637	.	-	0	ID=cds5378;Parent=gene5484;Dbxref=Genbank:NP_629567.1,GeneID:1100869;Name=NP_629567.1;Note=SC6A11.05c%2C possible integral membrane transport protein%2C len: 313 aa%3B similar to many proposed transport proteins e.g. TRNEW:CAB55533(EMBL:AL117322) integral membrane transport protein from Streptomyces coelicolor (317 aa) fasta scores%3B opt: 561%2C z-score: 649.2%2C E(): 9.4e-29%2C 34.4%25 identity in 314 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=SC6A11.05c;product=integral membrane transport protein;protein_id=NP_629567.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5900700	5900705	.	-	.	ID=id7061;Dbxref=GeneID:1100869;gbkey=RBS;gene=SC6A11.05c
NC_003888.3	RefSeq	sequence_feature	5900801	5901034	.	-	.	ID=id7062;Dbxref=GeneID:1100869;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 66.40%2C E-value 6.2e-16;gbkey=misc_feature;gene=SC6A11.05c
NC_003888.3	RefSeq	sequence_feature	5900945	5901031	.	-	.	ID=id7063;Dbxref=GeneID:1100869;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC6A11.05c
NC_003888.3	RefSeq	gene	5901634	5903010	.	-	.	ID=gene5485;Dbxref=GeneID:1100870;Name=SC6A11.06c;gbkey=Gene;gene=SC6A11.06c;gene_biotype=protein_coding;gene_synonym=SC6A11.06c;locus_tag=SCO5430
NC_003888.3	RefSeq	CDS	5901634	5903010	.	-	0	ID=cds5379;Parent=gene5485;Dbxref=Genbank:NP_629568.1,GeneID:1100870;Name=NP_629568.1;Note=SC6A11.06c%2C possible extracellular solute-binding lipoprotein%2C len: 458 aa%3B similar to many proposed solute-binding proteins e.g. TR:P72397 (EMBL:Y07706) maltose-binding protein from Streptomyces coelicolor (423 aa) fasta scores%3B opt: 284%2C z-score: 316.1%2C E(): 3.4e-10%2C 29.1%25 identity in 443 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal signal sequence;gbkey=CDS;gene=SC6A11.06c;product=extracellular solute-binding lipoprotein;protein_id=NP_629568.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5901644	5901650	.	-	.	ID=id7064;Dbxref=GeneID:1100870;gbkey=RBS;gene=SC6A11.06c
NC_003888.3	RefSeq	sequence_feature	5901664	5902581	.	-	.	ID=id7065;Dbxref=GeneID:1100870;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 91.90%2C E-value 1.3e-23;gbkey=misc_feature;gene=SC6A11.06c
NC_003888.3	RefSeq	sequence_feature	5902939	5902971	.	-	.	ID=id7066;Dbxref=GeneID:1100870;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6A11.06c
NC_003888.3	RefSeq	ribosome_entry_site	5903018	5903024	.	-	.	ID=id7067;gbkey=RBS
NC_003888.3	RefSeq	gene	5903536	5904399	.	-	.	ID=gene5486;Dbxref=GeneID:1100871;Name=SC6A11.07c;gbkey=Gene;gene=SC6A11.07c;gene_biotype=protein_coding;gene_synonym=SC6A11.07c;locus_tag=SCO5431
NC_003888.3	RefSeq	CDS	5903536	5904399	.	-	0	ID=cds5380;Parent=gene5486;Dbxref=Genbank:NP_629569.1,GeneID:1100871;Name=NP_629569.1;Note=SC6A11.07c%2C possible  nucleosidase%2C len: 287 aa%3B similar to many e.g. SW:P24247 (PFS_ECOLI) MTA/SAH nucleosidase (P46) from Escherichia coli (232 aa) fasta scores: opt: 211%2C z-score: 251.7%2C E(): 1.3e-06%2C 27.1%25 identity in 210 aa overlap. Contains Pfam match to entry PF01048 PNP_UDP_1%2C Phosphorylase family (which includes some nucleosidases) and possible N-terminal signal sequence;gbkey=CDS;gene=SC6A11.07c;product=nucleosidase;protein_id=NP_629569.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5903692	5904375	.	-	.	ID=id7068;Dbxref=GeneID:1100871;Note=Pfam match to entry PF01048 PNP_UDP_1%2C Phosphorylase family%2C score 18.20%2C E-value 8.3e-07;gbkey=misc_feature;gene=SC6A11.07c
NC_003888.3	RefSeq	ribosome_entry_site	5904405	5904409	.	-	.	ID=id7069;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5904414	5904419	.	+	.	ID=id7070;gbkey=RBS
NC_003888.3	RefSeq	gene	5904427	5904966	.	+	.	ID=gene5487;Dbxref=GeneID:1100872;Name=SC6A11.08;gbkey=Gene;gene=SC6A11.08;gene_biotype=protein_coding;gene_synonym=SC6A11.08;locus_tag=SCO5432
NC_003888.3	RefSeq	CDS	5904427	5904966	.	+	0	ID=cds5381;Parent=gene5487;Dbxref=Genbank:NP_629570.1,GeneID:1100872;Name=NP_629570.1;Note=SC6A11.08%2C possible integral membrane protein%2C len: 179 aa%3B no significant database similarities. Contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=SC6A11.08;product=hypothetical protein;protein_id=NP_629570.1;transl_table=11
NC_003888.3	RefSeq	gene	5905174	5907459	.	+	.	ID=gene5488;Dbxref=GeneID:1100873;Name=SC6A11.09;gbkey=Gene;gene=SC6A11.09;gene_biotype=protein_coding;gene_synonym=SC6A11.09;locus_tag=SCO5433
NC_003888.3	RefSeq	CDS	5905174	5907459	.	+	0	ID=cds5382;Parent=gene5488;Dbxref=Genbank:NP_629571.1,GeneID:1100873;Name=NP_629571.1;Note=SC6A11.09%2C possible AfsR-like regulator%2C len: 816 aa%3B similar to others from Streptomyces spp. e.g. SW:P25941 (AFSR_STRCO) regulatory protein AfsR from Streptomyces coelicolor (993 aa) fasta scores: opt: 490%2C z-score: 458.0%2C E(): 4.2e-18%2C 33.7%25 identity in 656 aa overlap. Note that this protein contains a Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) but no helix-turn-helix motifs;gbkey=CDS;gene=SC6A11.09;product=AfsR-like regulator;protein_id=NP_629571.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5905492	5905515	.	+	.	ID=id7071;Dbxref=GeneID:1100873;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6A11.09
NC_003888.3	RefSeq	gene	5907344	5908036	.	-	.	ID=gene5489;Dbxref=GeneID:1100874;Name=SC6A11.10c;gbkey=Gene;gene=SC6A11.10c;gene_biotype=protein_coding;gene_synonym=SC6A11.10c;locus_tag=SCO5434
NC_003888.3	RefSeq	CDS	5907344	5908036	.	-	0	ID=cds5383;Parent=gene5489;Dbxref=Genbank:NP_629572.1,GeneID:1100874;Name=NP_629572.1;Note=SC6A11.10c%2C possible two-component response regulator%2C len: 230 aa%3B similar to many e.g. SW:Q54149 (DPIA_ECOLI) transcriptional regulatory protein DpiA from Escherichia coli (226 aa) fasta scores: opt: 393%2C z-score: 440.6%2C E(): 3.9e-17%2C 33.8%25 identity in 222 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and a helix-turn-helix motif score 1515 (+4.35 SD) in ID at residue 179;gbkey=CDS;gene=SC6A11.10c;product=two-component response regulator;protein_id=NP_629572.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5907671	5908012	.	-	.	ID=id7072;Dbxref=GeneID:1100874;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 94.90%2C E-value 1.6e-24;gbkey=misc_feature;gene=SC6A11.10c
NC_003888.3	RefSeq	gene	5908033	5909691	.	-	.	ID=gene5490;Dbxref=GeneID:1100875;Name=SC6A11.11c;gbkey=Gene;gene=SC6A11.11c;gene_biotype=protein_coding;gene_synonym=SC6A11.11c;locus_tag=SCO5435
NC_003888.3	RefSeq	CDS	5908033	5909691	.	-	0	ID=cds5384;Parent=gene5490;Dbxref=Genbank:NP_629573.1,GeneID:1100875;Name=NP_629573.1;Note=SC6A11.11c%2C possible two-component sensor kinase%2C len: 552 aa%3B similar to many eg. SW:P39272 (DCUS_ECOLI) sensor protein DcuS from Escherichia coli (543 aa) fasta scores%3B opt: 764%2C z-score: 809.1%2C E(): 0%2C 29.3%25 identity in 540 aa overlap. Contains Pfam match to entry PF00512 signal%2C Histidine kinase and possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=SC6A11.11c;product=two-component sensor kinase;protein_id=NP_629573.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5908042	5908047	.	-	.	ID=id7073;Dbxref=GeneID:1100875;gbkey=RBS;gene=SC6A11.11c
NC_003888.3	RefSeq	sequence_feature	5908096	5908731	.	-	.	ID=id7074;Dbxref=GeneID:1100875;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 61.60%2C E-value 1.7e-14;gbkey=misc_feature;gene=SC6A11.11c
NC_003888.3	RefSeq	ribosome_entry_site	5909701	5909706	.	-	.	ID=id7075;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5909833	5909839	.	+	.	ID=id7076;gbkey=RBS
NC_003888.3	RefSeq	gene	5909846	5911246	.	+	.	ID=gene5491;Dbxref=GeneID:1100876;Name=SC6A11.12;gbkey=Gene;gene=SC6A11.12;gene_biotype=protein_coding;gene_synonym=SC6A11.12;locus_tag=SCO5436
NC_003888.3	RefSeq	CDS	5909846	5911246	.	+	0	ID=cds5385;Parent=gene5491;Dbxref=Genbank:NP_629574.1,GeneID:1100876;Name=NP_629574.1;Note=SC6A11.12%2C possible sodium:dicarboxylate symporter%2C len: 466 aa%3B similar to many e.g. SW:P50334 (DCTA_SALTY) C4-dicarboxylate transport protein from Salmonella typhimurium (428 aa) fasta scores: opt: 1320%2C z-score: 1451.6%2C E(): 0%2C 48.9%25 identity in 419 aa overlap. Contains Pfam match to entry PF00375 SDF%2C Sodium:dicarboxylate symporter family;gbkey=CDS;gene=SC6A11.12;product=sodium:dicarboxylate symporter;protein_id=NP_629574.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5909909	5911081	.	+	.	ID=id7077;Dbxref=GeneID:1100876;Note=Pfam match to entry PF00375 SDF%2C Sodium:dicarboxylate symporter family%2C score 350.60%2C E-value 1.7e-101;gbkey=misc_feature;gene=SC6A11.12
NC_003888.3	RefSeq	gene	5911410	5911808	.	+	.	ID=gene5492;Dbxref=GeneID:1100877;Name=SC6A11.13;gbkey=Gene;gene=SC6A11.13;gene_biotype=protein_coding;gene_synonym=SC6A11.13;locus_tag=SCO5437
NC_003888.3	RefSeq	CDS	5911410	5911808	.	+	0	ID=cds5386;Parent=gene5492;Dbxref=Genbank:NP_629575.1,GeneID:1100877;Name=NP_629575.1;Note=SC6A11.13%2C possible MerR-family transcriptional regulator%2C len: 132 aa%3B similar to many e.g. TR:Q9X5V4 (EMBL:AF127795) heavy metal regulator HmrR from Rhizobium leguminosarum (biovar viciae) (129 aa) fasta scores%3B opt: 228%2C z-score: 295.1%2C E(): 5e-09%2C 35.7%25 identity in 129 aa overlap. Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and possible helix-turn-helix motif score 1747 (+5.14 SD) in ID at residue 1;gbkey=CDS;gene=SC6A11.13;product=MerR family transcriptional regulator;protein_id=NP_629575.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5911419	5911523	.	+	.	ID=id7078;Dbxref=GeneID:1100877;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 37.40%2C E-value 3.2e-07;gbkey=misc_feature;gene=SC6A11.13
NC_003888.3	RefSeq	gene	5911820	5912134	.	+	.	ID=gene5493;Dbxref=GeneID:1100878;Name=SC6A11.14;gbkey=Gene;gene=SC6A11.14;gene_biotype=protein_coding;gene_synonym=SC6A11.14,trxA2;locus_tag=SCO5438
NC_003888.3	RefSeq	CDS	5911820	5912134	.	+	0	ID=cds5387;Parent=gene5493;Dbxref=Genbank:NP_629576.1,GeneID:1100878;Name=NP_629576.1;Note=SC6A11.14%2C trxA2%2C thioredoxin%2C len: 104 aa%3B similar to many e.g. SW:P52230 (THIO_STRCO) thioredoxin TrxA from Streptomyces coelicolor (110 aa) fasta scores: opt: 360%2C z-score: 470.8%2C E(): 8.2e-19%2C 47.5%25 identity in 101 aa overlap. Contains Pfam match to entry PF00085 thiored%2C Thioredoxin and Prosite match to PS00194 Thioredoxin family active site;gbkey=CDS;gene=SC6A11.14;product=thioredoxin;protein_id=NP_629576.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5911820	5912131	.	+	.	ID=id7079;Dbxref=GeneID:1100878;Note=Pfam match to entry PF00085 thiored%2C Thioredoxin%2C score 97.20%2C E-value 5.4e-28;gbkey=misc_feature;gene=SC6A11.14
NC_003888.3	RefSeq	sequence_feature	5911880	5911936	.	+	.	ID=id7080;Dbxref=GeneID:1100878;Note=PS00194 Thioredoxin family active site;gbkey=misc_feature;gene=SC6A11.14
NC_003888.3	RefSeq	ribosome_entry_site	5912256	5912261	.	+	.	ID=id7081;gbkey=RBS
NC_003888.3	RefSeq	gene	5912270	5914537	.	+	.	ID=gene5494;Dbxref=GeneID:1100879;Name=SC6A11.15;gbkey=Gene;gene=SC6A11.15;gene_biotype=protein_coding;gene_synonym=SC6A11.15;locus_tag=SCO5439
NC_003888.3	RefSeq	CDS	5912270	5914537	.	+	0	ID=cds5388;Parent=gene5494;Dbxref=Genbank:NP_629577.1,GeneID:1100879;Name=NP_629577.1;Note=SC6A11.15%2C hypothetical protein%2C len: 755 aa%3B similar to TR:O32215 (EMBL:Z99121) hypothetical protein from Bacillus subtilis (774 aa) fasta scores: opt: 323%2C z-score: 361.2%2C E(): 1e-12%2C 23.5%25 identity in 763 aa overlap;gbkey=CDS;gene=SC6A11.15;product=hypothetical protein;protein_id=NP_629577.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5914516	5917012	.	-	.	ID=id7082;Note=Region previously sequenced as EMBL:X83397;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5914595	5916919	.	-	.	ID=gene5495;Dbxref=GeneID:1100880;Name=glgBI;gbkey=Gene;gene=glgBI;gene_biotype=protein_coding;gene_synonym=glgBI,SC6A11.16c;locus_tag=SCO5440
NC_003888.3	RefSeq	CDS	5914595	5916919	.	-	0	ID=cds5389;Parent=gene5495;Dbxref=Genbank:NP_629578.1,GeneID:1100880;Name=NP_629578.1;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain;gbkey=CDS;gene=glgBI;product=glycogen branching protein;protein_id=NP_629578.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5914862	5916016	.	-	.	ID=id7083;Dbxref=GeneID:1100880;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score -40.10%2C E-value 2.2e-05;gbkey=misc_feature;gene=glgBI
NC_003888.3	RefSeq	sequence_feature	5916269	5924578	.	-	.	ID=id7084;Note=Region previously sequenced as EMBL:AJ001205.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	5916928	5916933	.	-	.	ID=id7085;gbkey=RBS
NC_003888.3	RefSeq	gene	5916960	5918354	.	-	.	ID=gene5496;Dbxref=GeneID:1100881;Name=pep2A;gbkey=Gene;gene=pep2A;gene_biotype=protein_coding;gene_synonym=pep2A,SC6A11.17c;locus_tag=SCO5441
NC_003888.3	RefSeq	CDS	5916960	5918354	.	-	0	ID=cds5390;Parent=gene5496;Dbxref=Genbank:NP_629579.1,GeneID:1100881;Name=NP_629579.1;Note=SC6A11.17c%2C pep2A%2C hypothetical protein%2C len: 464 aa%3B previously sequenced as TR:O54204 (EMBL:AJ001205);gbkey=CDS;gene=pep2A;product=hypothetical protein;protein_id=NP_629579.1;transl_table=11
NC_003888.3	RefSeq	gene	5918375	5920075	.	-	.	ID=gene5497;Dbxref=GeneID:1100882;Name=SC6A11.18c;gbkey=Gene;gene=SC6A11.18c;gene_biotype=protein_coding;gene_synonym=SC6A11.18c;locus_tag=SCO5442
NC_003888.3	RefSeq	CDS	5918375	5920075	.	-	0	ID=cds5391;Parent=gene5497;Dbxref=Genbank:NP_629580.1,GeneID:1100882;Name=NP_629580.1;Note=SC6A11.18c%2C possible trehalose synthase%2C len: 566 aa%3B previously sequenced as TR:O54203 (EMBL:AJ001205) Streptomyces coelicolor trehalose synthase. Also similar to many others e.g. SW:Q99040 (DEXB_STRMU) glucan 1%2C6-alpha-glucosidase DexB from Streptococcus mutans (536 aa) fasta scores: opt: 867%2C z-score: 1015.8%2C E(): 0%2C 32.2%25 identity in 522 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase;gbkey=CDS;gene=SC6A11.18c;product=trehalose synthase;protein_id=NP_629580.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5918645	5919994	.	-	.	ID=id7086;Dbxref=GeneID:1100882;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 279.90%2C E-value 3.2e-80;gbkey=misc_feature;gene=SC6A11.18c
NC_003888.3	RefSeq	gene	5920072	5922099	.	-	.	ID=gene5498;Dbxref=GeneID:1100883;Name=pep1A;gbkey=Gene;gene=pep1A;gene_biotype=protein_coding;gene_synonym=pep1A;locus_tag=SCO5443
NC_003888.3	RefSeq	CDS	5920072	5922099	.	-	0	ID=cds5392;Parent=gene5498;Dbxref=Genbank:NP_629581.1,GeneID:1100883;Name=NP_629581.1;Note=SC6A11.19c%2C pep1A%2C possible alpha-amylase%2C len: 675 aa%3B previously sequenced as TR:O54202 (EMBL:AJ001205). Also similar to TRNEW:AAF07898 (EMBL:AF172946) glucanase GlgE from Mycobacterium smegmatis (697 aa) fasta scores%3B opt: 2199%2C z-score: 2484.5%2C E(): 0%2C 53.6%25 identity in 679 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase;gbkey=CDS;gene=pep1A;product=alpha-amylase;protein_id=NP_629581.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5920088	5920092	.	-	.	ID=id7087;Dbxref=GeneID:1100883;gbkey=RBS;gene=pep1A
NC_003888.3	RefSeq	sequence_feature	5920234	5921463	.	-	.	ID=id7088;Dbxref=GeneID:1100883;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score -81.50%2C E-value 0.0017;gbkey=misc_feature;gene=pep1A
NC_003888.3	RefSeq	ribosome_entry_site	5922105	5922109	.	-	.	ID=id7089;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5922453	5922457	.	+	.	ID=id7090;gbkey=RBS
NC_003888.3	RefSeq	gene	5922464	5925088	.	+	.	ID=gene5499;Dbxref=GeneID:1100884;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;gene_synonym=glgP,SC3D11.01,SC6A11.20;locus_tag=SCO5444
NC_003888.3	RefSeq	CDS	5922464	5925088	.	+	0	ID=cds5393;Parent=gene5499;Dbxref=Genbank:NP_733664.1,GeneID:1100884;Name=NP_733664.1;Note=SC3D11.01%2C glgP%2C possible glycogen phosphorylase%2C len: >201aa%3B previously sequenced as TR:O70011 (EMBL:AJ001205). Also similar to TR:Q9YGA7 (EMBL:AF115479) maltodextrin phosphorylase from Thermococcus litoralis (831 aa) fasta scores%3B opt: 242%2C z-score: 283.2%2C E(): 2.3e-08%2C 30.9%25 identity in 194 aa overlap.~SC6A11.20%2C glgP%2C possible glycogen phosphorylase (fragment)%2C len: >705 aa%3B previously sequenced as TR:O70011 (EMBL:AJ001205). Also similar to TR:Q9YGA7 (EMBL:AF115479) maltodextrin phosphorylase from Thermococcus litoralis (831 aa) fasta scores%3B opt: 849%2C z-score: 972.3%2C E(): 0%2C 40.5%25 identity in 699 aa overlap. Contains Prosite match to PS00102 Phosphorylase pyridoxal-phosphate attachment site;gbkey=CDS;gene=glgP;product=glycogen phosphorylase;protein_id=NP_733664.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5924288	5924326	.	+	.	ID=id7091;Dbxref=GeneID:1100884;Note=PS00102 Phosphorylase pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=glgP
NC_003888.3	RefSeq	sequence_feature	5924482	5925856	.	-	.	ID=id7092;Note=Region previously sequenced as EMBL:AJ001205 Streptomyces coelicolor A3(2) glycogen metabolism clusterI;gbkey=misc_feature
NC_003888.3	RefSeq	stem_loop	5925109	5925157	.	+	.	ID=id7093;Note=Inverted repeat with 1 base loop%2C Score 51: 21/24 ( 87%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5925132	5925698	.	-	.	ID=gene5500;Dbxref=GeneID:1100885;Name=SC3D11.02c;gbkey=Gene;gene=SC3D11.02c;gene_biotype=protein_coding;gene_synonym=SC3D11.02c;locus_tag=SCO5445
NC_003888.3	RefSeq	CDS	5925132	5925698	.	-	0	ID=cds5394;Parent=gene5500;Dbxref=Genbank:NP_629582.1,GeneID:1100885;Name=NP_629582.1;Note=SC3D11.02c%2C hypothetical protein%2C len: 188aa%3B previously sequenced as TR:Q9X945 (EMBL:AJ001205) and predicted as a 134 aa protein. Also similar to TR:O06198 (EMBL:Z95387) hypothetical protein from Mycobacterium tuberculosis (166 aa) fasta scores%3B opt: 407%2C z-score: 496.4%2C E(): 3.1e-20%2C 44.0%25 identity in 159 aa overlap;gbkey=CDS;gene=SC3D11.02c;product=hypothetical protein;protein_id=NP_629582.1;transl_table=11
NC_003888.3	RefSeq	gene	5925711	5927360	.	-	.	ID=gene5501;Dbxref=GeneID:1100886;Name=SC3D11.03c;gbkey=Gene;gene=SC3D11.03c;gene_biotype=protein_coding;gene_synonym=SC3D11.03c;locus_tag=SCO5446
NC_003888.3	RefSeq	CDS	5925711	5927360	.	-	0	ID=cds5395;Parent=gene5501;Dbxref=Genbank:NP_629583.1,GeneID:1100886;Name=NP_629583.1;Note=SC3D11.03c%2C probable neutral zinc metalloprotease%2C len: 549aa%3B similar to many eg. SW:P05806 (NPRE_BACCE) bacillolysin precursor (EC 3.4.24.28) from Bacillus cereus (566 aa) fasta scores%3B opt: 607%2C z-score: 636.5%2C E(): 4.8e-28%2C 34.7%25 identity in 596 aa overlap. Also similar to the neighbouring CDS SC3D11.04c fasta scores%3B opt: 2442%2C z-score: 2158.9%2C E(): 0%2C 69.7%25 identity in 544 aa overlap and TR:CAB69762 (EMBL:AL137187)  metalloproteinase from Streptomyces coelicolor fasta scores%3B opt: 1290%2C z-score: 1143.7%2C E(): 0%2C 52.7%25 identity in 560 aa overlap. Contains Pfam match to entry PF01447 Peptidase_M4%2C Thermolysin family peptidase and Prosite match to PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC3D11.03c;product=hypothetical protein;protein_id=NP_629583.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5925720	5926709	.	-	.	ID=id7094;Dbxref=GeneID:1100886;Note=Pfam match to entry PF01447 Peptidase_M4%2C Thermolysin family peptidase%2C score 270.20%2C E-value 2.8e-77;gbkey=misc_feature;gene=SC3D11.03c
NC_003888.3	RefSeq	repeat_region	5925736	5927146	.	-	.	ID=id7095;Dbxref=GeneID:1100886;Note=Relevant to similarity between SC3D11.03c and SC3D11.04c;gbkey=repeat_region;gene=SC3D11.03c
NC_003888.3	RefSeq	sequence_feature	5926254	5926283	.	-	.	ID=id7096;Dbxref=GeneID:1100886;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC3D11.03c
NC_003888.3	RefSeq	ribosome_entry_site	5927364	5927371	.	-	.	ID=id7097;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	5927611	5927653	.	-	.	ID=id7098;Note=Inverted repeat with 7 base loop%2C Score 54: 18/18 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	5927688	5929742	.	-	.	ID=gene5502;Dbxref=GeneID:1100887;Name=SC3D11.04c;gbkey=Gene;gene=SC3D11.04c;gene_biotype=protein_coding;gene_synonym=SC3D11.04c;locus_tag=SCO5447
NC_003888.3	RefSeq	CDS	5927688	5929742	.	-	0	ID=cds5396;Parent=gene5502;Dbxref=Genbank:NP_629584.1,GeneID:1100887;Name=NP_629584.1;Note=SC3D11.04c%2C probable neutral zinc metalloprotease%2C len: 684aa%3B similar to many eg. SW:P43263 (NPRE_BACBR) bacillolysin precursor from Bacillus brevis (527 aa) fasta scores%3B opt: 648%2C z-score: 662.4%2C E(): 1.7e-29%2C 34.6%25 identity in 480 aa overlap. Also similar to the neighbouring CDS SC3D11.03c fasta scores%3B opt: 2442%2C z-score: 2055.1%2C E(): 0%2C 69.9%25 identity in 544 aa overlap and TR:CAB69762 (EMBL:AL137187)  metalloproteinase from Streptomyces coelicolor fasta scores%3B opt: 1265%2C z-score: 1067.4%2C E(): 0%2C 50.2%25 identity in 560 aa overlap. Contains Pfam match to entry PF01447 Peptidase_M4%2C Thermolysin family peptidase and Prosite match to PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC3D11.04c;product=neutral zinc metalloprotease;protein_id=NP_629584.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5928066	5929052	.	-	.	ID=id7099;Dbxref=GeneID:1100887;Note=Pfam match to entry PF01447 Peptidase_M4%2C Thermolysin family peptidase%2C score 259.50%2C E-value 4.4e-74;gbkey=misc_feature;gene=SC3D11.04c
NC_003888.3	RefSeq	repeat_region	5928086	5929486	.	-	.	ID=id7100;Dbxref=GeneID:1100887;Note=Relevant to similarity between SC3D11.03c and SC3D11.04c;gbkey=repeat_region;gene=SC3D11.04c
NC_003888.3	RefSeq	sequence_feature	5928606	5928635	.	-	.	ID=id7101;Dbxref=GeneID:1100887;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC3D11.04c
NC_003888.3	RefSeq	ribosome_entry_site	5929748	5929753	.	-	.	ID=id7102;gbkey=RBS
NC_003888.3	RefSeq	gene	5930034	5931785	.	-	.	ID=gene5503;Dbxref=GeneID:1100888;Name=SC3D11.05c;gbkey=Gene;gene=SC3D11.05c;gene_biotype=protein_coding;gene_synonym=SC3D11.05c;locus_tag=SCO5448
NC_003888.3	RefSeq	CDS	5930034	5931785	.	-	0	ID=cds5397;Parent=gene5503;Dbxref=Genbank:NP_629585.1,GeneID:1100888;Name=NP_629585.1;Note=SC3D11.05c%2C probable ABC transporter%2C len: 583aa%3B similar to many eg. TR:Q54204 (EMBL:X89010) from the 5'-hydroxystreptomycin production/transport operon of Streptomyces glaucescens (591 aa) fasta scores%3B opt: 1687%2C z-score: 1814.2%2C E(): 0%2C 49.3%25 identity in 564 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC3D11.05c;product=ABC transporter;protein_id=NP_629585.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5930136	5930690	.	-	.	ID=id7103;Dbxref=GeneID:1100888;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 146.30%2C E-value 5.4e-40;gbkey=misc_feature;gene=SC3D11.05c
NC_003888.3	RefSeq	sequence_feature	5930646	5930669	.	-	.	ID=id7104;Dbxref=GeneID:1100888;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3D11.05c
NC_003888.3	RefSeq	sequence_feature	5930892	5931707	.	-	.	ID=id7105;Dbxref=GeneID:1100888;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 66.90%2C E-value 4.2e-16;gbkey=misc_feature;gene=SC3D11.05c
NC_003888.3	RefSeq	gene	5931782	5933599	.	-	.	ID=gene5504;Dbxref=GeneID:1100889;Name=SC3D11.06c;gbkey=Gene;gene=SC3D11.06c;gene_biotype=protein_coding;gene_synonym=SC3D11.06c;locus_tag=SCO5449
NC_003888.3	RefSeq	CDS	5931782	5933599	.	-	0	ID=cds5398;Parent=gene5504;Dbxref=Genbank:NP_629586.1,GeneID:1100889;Name=NP_629586.1;Note=SC3D11.06c%2C probable ABC transporter%2C len: 605aa%3B similar to many eg. TR:Q54203 (EMBL:X89010) from the 5'-hydroxystreptomycin production/transport operon of Streptomyces glaucescens (584 aa) fasta scores%3B opt: 885%2C z-score: 878.4%2C E(): 0%2C 40.3%25 identity in 601 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region and Prosite match to PS00211 ABC transporters family signature.;gbkey=CDS;gene=SC3D11.06c;product=ABC transporter;protein_id=NP_629586.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5931798	5931804	.	-	.	ID=id7106;Dbxref=GeneID:1100889;gbkey=RBS;gene=SC3D11.06c
NC_003888.3	RefSeq	sequence_feature	5931902	5932528	.	-	.	ID=id7107;Dbxref=GeneID:1100889;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 40.90%2C E-value 1.5e-08;gbkey=misc_feature;gene=SC3D11.06c
NC_003888.3	RefSeq	sequence_feature	5932079	5932123	.	-	.	ID=id7108;Dbxref=GeneID:1100889;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC3D11.06c
NC_003888.3	RefSeq	sequence_feature	5932694	5933503	.	-	.	ID=id7109;Dbxref=GeneID:1100889;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 38.70%2C E-value 1.3e-07;gbkey=misc_feature;gene=SC3D11.06c
NC_003888.3	RefSeq	gene	5933596	5935479	.	-	.	ID=gene5505;Dbxref=GeneID:1100890;Name=SC3D11.07c;gbkey=Gene;gene=SC3D11.07c;gene_biotype=protein_coding;gene_synonym=SC3D11.07c;locus_tag=SCO5450
NC_003888.3	RefSeq	CDS	5933596	5935479	.	-	0	ID=cds5399;Parent=gene5505;Dbxref=Genbank:NP_629587.1,GeneID:1100890;Name=NP_629587.1;Note=SC3D11.07c%2C probable ABC transporter%2C len: 627aa%3B similar to many eg. TRNEW:CAB66302 (EMBL:AL136519) ABC transporter%2C ATP-binding component from Streptomyces coelicolor (1243 aa) fasta scores%3B opt: 1238%2C z-score: 1250.8%2C E(): 0%2C 38.7%25 identity in 633 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C Prosite match to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC3D11.07c;product=ABC transporter;protein_id=NP_629587.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5933689	5934243	.	-	.	ID=id7110;Dbxref=GeneID:1100890;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 222.90%2C E-value 4.7e-63;gbkey=misc_feature;gene=SC3D11.07c
NC_003888.3	RefSeq	sequence_feature	5933866	5933910	.	-	.	ID=id7111;Dbxref=GeneID:1100890;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC3D11.07c
NC_003888.3	RefSeq	sequence_feature	5934199	5934222	.	-	.	ID=id7112;Dbxref=GeneID:1100890;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3D11.07c
NC_003888.3	RefSeq	sequence_feature	5934472	5935296	.	-	.	ID=id7113;Dbxref=GeneID:1100890;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 94.90%2C E-value 1.6e-24;gbkey=misc_feature;gene=SC3D11.07c
NC_003888.3	RefSeq	gene	5935476	5937458	.	-	.	ID=gene5506;Dbxref=GeneID:1100891;Name=SC3D11.08c;gbkey=Gene;gene=SC3D11.08c;gene_biotype=protein_coding;gene_synonym=SC3D11.08c;locus_tag=SCO5451
NC_003888.3	RefSeq	CDS	5935476	5937458	.	-	0	ID=cds5400;Parent=gene5506;Dbxref=Genbank:NP_629588.1,GeneID:1100891;Name=NP_629588.1;Note=SC3D11.08c%2C probable ABC transporter%2C len: 660aa%3B similar to many eg. TRNEW:CAB66302 (EMBL:AL136519) ABC transporter%2C ATP-binding component from Streptomyces coelicolor (1243 aa) fasta scores%3B opt: 682%2C z-score: 703.6%2C E(): 8.8e-32%2C 34.4%25 identity in 608 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C Prosite match to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC3D11.08c;product=ABC transporter;protein_id=NP_629588.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5935487	5935495	.	-	.	ID=id7114;Dbxref=GeneID:1100891;gbkey=RBS;gene=SC3D11.08c
NC_003888.3	RefSeq	sequence_feature	5935599	5936153	.	-	.	ID=id7115;Dbxref=GeneID:1100891;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 175.90%2C E-value 6.4e-49;gbkey=misc_feature;gene=SC3D11.08c
NC_003888.3	RefSeq	sequence_feature	5935776	5935820	.	-	.	ID=id7116;Dbxref=GeneID:1100891;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC3D11.08c
NC_003888.3	RefSeq	sequence_feature	5936109	5936132	.	-	.	ID=id7117;Dbxref=GeneID:1100891;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3D11.08c
NC_003888.3	RefSeq	sequence_feature	5936517	5937332	.	-	.	ID=id7118;Dbxref=GeneID:1100891;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 143.30%2C E-value 4.3e-39;gbkey=misc_feature;gene=SC3D11.08c
NC_003888.3	RefSeq	gene	5937594	5938532	.	+	.	ID=gene5507;Dbxref=GeneID:1100892;Name=SC3D11.09;gbkey=Gene;gene=SC3D11.09;gene_biotype=protein_coding;gene_synonym=SC3D11.09;locus_tag=SCO5452
NC_003888.3	RefSeq	CDS	5937594	5938532	.	+	0	ID=cds5401;Parent=gene5507;Dbxref=Genbank:NP_629589.1,GeneID:1100892;Name=NP_629589.1;Note=SC3D11.09%2C probable ABC transporter%2C ATP-binding subunit%2C len: 312aa%3B similar to many eg. TR:Q9XAC8 (EMBL:AL096839) ABC transporter%2C ATP-binding subunit from Streptomyces coelicolor (307 aa) fasta scores%3B opt: 713%2C z-score: 795.0%2C E(): 0%2C 43.5%25 identity in 299 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature.;gbkey=CDS;gene=SC3D11.09;product=ABC transporter ATP-binding protein;protein_id=NP_629589.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5937714	5938244	.	+	.	ID=id7119;Dbxref=GeneID:1100892;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 159.00%2C E-value 8.1e-44;gbkey=misc_feature;gene=SC3D11.09
NC_003888.3	RefSeq	sequence_feature	5937735	5937758	.	+	.	ID=id7120;Dbxref=GeneID:1100892;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3D11.09
NC_003888.3	RefSeq	sequence_feature	5938017	5938061	.	+	.	ID=id7121;Dbxref=GeneID:1100892;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC3D11.09
NC_003888.3	RefSeq	ribosome_entry_site	5938517	5938521	.	+	.	ID=id7122;Dbxref=GeneID:1100892;gbkey=RBS;gene=SC3D11.09
NC_003888.3	RefSeq	gene	5938529	5939278	.	+	.	ID=gene5508;Dbxref=GeneID:1100893;Name=SC3D11.10;gbkey=Gene;gene=SC3D11.10;gene_biotype=protein_coding;gene_synonym=SC3D11.10;locus_tag=SCO5453
NC_003888.3	RefSeq	CDS	5938529	5939278	.	+	0	ID=cds5402;Parent=gene5508;Dbxref=Genbank:NP_629590.1,GeneID:1100893;Name=NP_629590.1;Note=SC3D11.10%2C possible integral membrane protein%2C len: 249aa%3B similar to many proposed membrane proteins eg. TR:Q9XAC7 (EMBL:AL096839) integral membrane transport protein from Streptomyces coelicolor (269 aa) fasta scores%3B opt: 292%2C z-score: 325.6%2C E(): 1e-10%2C 29.8%25 identity in 245 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SC3D11.10;product=hypothetical protein;protein_id=NP_629590.1;transl_table=11
NC_003888.3	RefSeq	gene	5939275	5940603	.	+	.	ID=gene5509;Dbxref=GeneID:1100894;Name=SC3D11.11;gbkey=Gene;gene=SC3D11.11;gene_biotype=protein_coding;gene_synonym=SC3D11.11;locus_tag=SCO5454
NC_003888.3	RefSeq	CDS	5939275	5940603	.	+	0	ID=cds5403;Parent=gene5509;Dbxref=Genbank:NP_629591.1,GeneID:1100894;Name=NP_629591.1;Note=SC3D11.11%2C possible two-component system sensor kinase%2C len: 442 aa%3B similar to many e.g. TR:CAA74719 (EMBL:Y14336) histidine autokinase from Streptomyces reticuli (398 aa) fasta scores%3B opt: 519%2C z-score: 573.4%2C E(): 1.6e-24%2C 36.3%25 identity in 369 aa overlap and SW:M23558 (DEGS_BACSU) sensor protein DegS from Bacillus subtilis (385 aa) fasta scores%3B opt: 343%2C z-score: 381.0%2C E(): 8.2e-14%2C 31.7%25 identity in 221 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3D11.11;product=two-component system sensor kinase;protein_id=NP_629591.1;transl_table=11
NC_003888.3	RefSeq	gene	5940593	5941267	.	+	.	ID=gene5510;Dbxref=GeneID:1100895;Name=SC3D11.12;gbkey=Gene;gene=SC3D11.12;gene_biotype=protein_coding;gene_synonym=SC3D11.12;locus_tag=SCO5455
NC_003888.3	RefSeq	CDS	5940593	5941267	.	+	0	ID=cds5404;Parent=gene5510;Dbxref=Genbank:NP_629592.1,GeneID:1100895;Name=NP_629592.1;Note=SC3D11.12%2C possible two-component system response regulator%2C len: 224 aa%3B similar to many proposed response regulators e.g. TRNEW:CAA74720 (EMBL:Y14336) response regulatory protein SenR from Streptomyces reticuli (217 aa) fasta scores%3B opt: 643%2C z-score: 725.3%2C E(): 5.5e-33%2C 53.8%25 identity in 208 aa overlap and SW:X13360 (NARL_ECOLI) nitrate/nitrite response regulator protein NarL from Escherichia coli (216 aa) fasta scores%3B opt: 512%2C z-score: 580.2%2C E(): 6.6e-25%2C 38.6%25 identity in 207 aa overlap. Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C Prosite match to PS00622 Bacterial regulatory proteins%2C luxR family signature and helix-turn-helix motif Score 1439 (+4.09 SD) in ID at residue 178.;gbkey=CDS;gene=SC3D11.12;product=two-component system response regulator;protein_id=NP_629592.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5940641	5940982	.	+	.	ID=id7123;Dbxref=GeneID:1100895;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 134.50%2C E-value 1.9e-36;gbkey=misc_feature;gene=SC3D11.12
NC_003888.3	RefSeq	sequence_feature	5941070	5941264	.	+	.	ID=id7124;Dbxref=GeneID:1100895;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 85.50%2C E-value 1.1e-21;gbkey=misc_feature;gene=SC3D11.12
NC_003888.3	RefSeq	sequence_feature	5941121	5941204	.	+	.	ID=id7125;Dbxref=GeneID:1100895;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC3D11.12
NC_003888.3	RefSeq	gene	5941319	5943667	.	-	.	ID=gene5511;Dbxref=GeneID:1100896;Name=glgX2;gbkey=Gene;gene=glgX2;gene_biotype=protein_coding;gene_synonym=glgX2,SC3D11.13c;locus_tag=SCO5456
NC_003888.3	RefSeq	CDS	5941319	5943667	.	-	0	ID=cds5405;Parent=gene5511;Dbxref=Genbank:NP_629593.1,GeneID:1100896;Name=NP_629593.1;Note=SC3D11.13c%2C glgX2%2C possible glycosyl hydrolase ( hypothetical protein)%2C len: 782 aa%3B similar to many eg. TR:Q9X947 (EMBL:AJ001206) glycogen debranching enzyme from Streptomyces coelicolor (715 aa) fasta scores%3B opt: 2630%2C z-score: 2693.4%2C E(): 0%2C 58.5%25 identity in 725 aa overlap and SW:P15067 (GLGX_ECOLI) glycogen operon protein from Escherichia coli (657 aa) fasta scores%3B opt: 1608%2C z-score: 1647.7%2C E(): 0%2C 47.2%25 identity in 669 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=glgX2;product=glycosyl hydrolase;protein_id=NP_629593.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5941601	5942965	.	-	.	ID=id7126;Dbxref=GeneID:1100896;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 31.80%2C E-value 1.1e-08;gbkey=misc_feature;gene=glgX2
NC_003888.3	RefSeq	ribosome_entry_site	5943676	5943680	.	-	.	ID=id7127;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5943726	5943730	.	+	.	ID=id7128;gbkey=RBS
NC_003888.3	RefSeq	gene	5943733	5944983	.	+	.	ID=gene5512;Dbxref=GeneID:1100897;Name=SC3D11.14;gbkey=Gene;gene=SC3D11.14;gene_biotype=protein_coding;gene_synonym=SC3D11.14;locus_tag=SCO5457
NC_003888.3	RefSeq	CDS	5943733	5944983	.	+	0	ID=cds5406;Parent=gene5512;Dbxref=Genbank:NP_629594.1,GeneID:1100897;Name=NP_629594.1;Note=SC3D11.14%2C possible lipoprotein%2C len: 416aa%3B similar to many eg. TR:O53223 (EMBL:AL021185) hypothetical protein from Mycobacterium tuberculosis (408 aa) fasta scores%3B opt: 737%2C z-score: 800.7%2C E(): 0%2C 32.9%25 identity in 413 aa overlap. Also similar to neighbouring CDS SC3D11.15 fasta scores%3B opt: 1348%2C z-score: 1271.2%2C E(): 0%2C 53.3%25 identity in 394 aa overlap. Contains possible N-terminal signal sequence and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC3D11.14;product=lipoprotein;protein_id=NP_629594.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5943793	5943825	.	+	.	ID=id7129;Dbxref=GeneID:1100897;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC3D11.14
NC_003888.3	RefSeq	repeat_region	5944113	5944957	.	+	.	ID=id7130;Dbxref=GeneID:1100897;gbkey=repeat_region;gene=SC3D11.14
NC_003888.3	RefSeq	gene	5945149	5946351	.	+	.	ID=gene5513;Dbxref=GeneID:1100898;Name=SC3D11.15;gbkey=Gene;gene=SC3D11.15;gene_biotype=protein_coding;gene_synonym=SC3D11.15;locus_tag=SCO5458
NC_003888.3	RefSeq	CDS	5945149	5946351	.	+	0	ID=cds5407;Parent=gene5513;Dbxref=Genbank:NP_629595.1,GeneID:1100898;Name=NP_629595.1;Note=SC3D11.15%2C possible lipoprotein%2C len: 400aa%3B similar to many eg. TR:Q9X811 (EMBL:AL049497) hypothetical protein from Streptomyces coelicolor (424 aa) fasta scores%3B opt: 755%2C z-score: 799.1%2C E(): 0%2C 33.0%25 identity in 409 aa overlap. Also similar to neighbouring CDS SC3D11.14 fasta scores%3B opt: 1348%2C z-score: 1211.8%2C E(): 0%2C 53.3%25 identity in 394 aa overlap. Contains possible N-terminal signal sequence and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC3D11.15;product=lipoprotein;protein_id=NP_629595.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5945179	5945211	.	+	.	ID=id7131;Dbxref=GeneID:1100898;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC3D11.15
NC_003888.3	RefSeq	repeat_region	5945489	5946337	.	+	.	ID=id7132;Dbxref=GeneID:1100898;gbkey=repeat_region;gene=SC3D11.15
NC_003888.3	RefSeq	ribosome_entry_site	5946392	5946395	.	+	.	ID=id7133;gbkey=RBS
NC_003888.3	RefSeq	gene	5946399	5947166	.	+	.	ID=gene5514;Dbxref=GeneID:1100899;Name=SC3D11.16;gbkey=Gene;gene=SC3D11.16;gene_biotype=protein_coding;gene_synonym=SC3D11.16;locus_tag=SCO5459
NC_003888.3	RefSeq	CDS	5946399	5947166	.	+	0	ID=cds5408;Parent=gene5514;Dbxref=Genbank:NP_629596.1,GeneID:1100899;Name=NP_629596.1;Note=SC3D11.16%2C probable enoyl-coA hydratase%2C len: 255aa%3B similar to many eg. SW:P52046 (CRT_CLOAB) 3-hydroxybutyryl-coa dehydratase from Clostridium acetobutylicum (261 aa) fasta scores%3B opt: 637%2C z-score: 725.4%2C E(): 5.4e-33%2C 43.4%25 identity in 249 aa overlap. Contains Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family and Prosite match to PS00166 Enoyl-CoA hydratase/isomerase signature.;gbkey=CDS;gene=SC3D11.16;product=enoyl-CoA hydratase;protein_id=NP_629596.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5946432	5946935	.	+	.	ID=id7134;Dbxref=GeneID:1100899;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 229.30%2C E-value 5.7e-65;gbkey=misc_feature;gene=SC3D11.16
NC_003888.3	RefSeq	sequence_feature	5946684	5946746	.	+	.	ID=id7135;Dbxref=GeneID:1100899;Note=PS00166 Enoyl-CoA hydratase/isomerase signature;gbkey=misc_feature;gene=SC3D11.16
NC_003888.3	RefSeq	ribosome_entry_site	5947298	5947303	.	+	.	ID=id7136;gbkey=RBS
NC_003888.3	RefSeq	gene	5947312	5947974	.	+	.	ID=gene5515;Dbxref=GeneID:1100900;Name=SC3D11.17;gbkey=Gene;gene=SC3D11.17;gene_biotype=protein_coding;gene_synonym=SC3D11.17;locus_tag=SCO5460
NC_003888.3	RefSeq	CDS	5947312	5947974	.	+	0	ID=cds5409;Parent=gene5515;Dbxref=Genbank:NP_629597.1,GeneID:1100900;Name=NP_629597.1;Note=SC3D11.17%2C possible AbaA-like regulatory protein%2C len: 220 aa%3B similar to many from Streptomyces spp. e.g. TRNEW:AAD46514 (EMBL:AF145724) regulatory protein from Streptomyces albus (137 aa) fasta scores%3B opt: 258%2C z-score: 275.0%2C E(): 6.6e-08%2C 45.3%25 identity in 128 aa overlap and TR:Q53897 (EMBL:X60316) AbaA from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 226%2C z-score: 240.9%2C E(): 5.3e-06%2C 32.3%25 identity in 189 aa overlap.;gbkey=CDS;gene=SC3D11.17;product=AbaA-like regulatory protein;protein_id=NP_629597.1;transl_table=11
NC_003888.3	RefSeq	gene	5948080	5948694	.	+	.	ID=gene5516;Dbxref=GeneID:1100901;Name=SC3D11.18;gbkey=Gene;gene=SC3D11.18;gene_biotype=protein_coding;gene_synonym=SC3D11.18;locus_tag=SCO5461
NC_003888.3	RefSeq	CDS	5948080	5948694	.	+	0	ID=cds5410;Parent=gene5516;Dbxref=Genbank:NP_629598.1,GeneID:1100901;Name=NP_629598.1;Note=SC3D11.18%2C possible hypothetical protein%2C len: 204aa%3B contains a possible non-cleavable N-terminal signal sequence.;gbkey=CDS;gene=SC3D11.18;product=hypothetical protein;protein_id=NP_629598.1;transl_table=11
NC_003888.3	RefSeq	gene	5948711	5949349	.	-	.	ID=gene5517;Dbxref=GeneID:1100902;Name=SC3D11.19c;gbkey=Gene;gene=SC3D11.19c;gene_biotype=protein_coding;gene_synonym=SC3D11.19c;locus_tag=SCO5462
NC_003888.3	RefSeq	CDS	5948711	5949349	.	-	0	ID=cds5411;Parent=gene5517;Dbxref=Genbank:NP_629599.1,GeneID:1100902;Name=NP_629599.1;Note=SC3D11.19c%2C unknown%2C len: 212 aa%3B contains a weak Pfam match over much of its length to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SC3D11.19c;product=hypothetical protein;protein_id=NP_629599.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5948747	5949148	.	-	.	ID=id7137;Dbxref=GeneID:1100902;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 6.80%2C E-value 0.19;gbkey=misc_feature;gene=SC3D11.19c
NC_003888.3	RefSeq	gene	5949398	5950312	.	+	.	ID=gene5518;Dbxref=GeneID:1100903;Name=SC3D11.20;gbkey=Gene;gene=SC3D11.20;gene_biotype=protein_coding;gene_synonym=SC3D11.20;locus_tag=SCO5463
NC_003888.3	RefSeq	CDS	5949398	5950312	.	+	0	ID=cds5412;Parent=gene5518;Dbxref=Genbank:NP_629600.1,GeneID:1100903;Name=NP_629600.1;Note=SC3D11.20%2C possible MerR-family transcriptional regulator%2C len: 304 aa%3B similar to many e.g. TRNEW:CAB56383 (EMBL:AL118515) MerR-family transcriptional regulator from Streptomyces coelicolor (319 aa) fasta scores%3B opt: 622%2C z-score: 719.6%2C E(): 1.2e-32%2C 41.3%25 identity in 310 aa overlap. Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family;gbkey=CDS;gene=SC3D11.20;product=MerR family transcriptional regulator;protein_id=NP_629600.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5949431	5949538	.	+	.	ID=id7138;Dbxref=GeneID:1100903;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 47.20%2C E-value 3.5e-10;gbkey=misc_feature;gene=SC3D11.20
NC_003888.3	RefSeq	ribosome_entry_site	5950352	5950356	.	+	.	ID=id7139;gbkey=RBS
NC_003888.3	RefSeq	gene	5950361	5950573	.	+	.	ID=gene5519;Dbxref=GeneID:1100904;Name=SC3D11.21;gbkey=Gene;gene=SC3D11.21;gene_biotype=protein_coding;gene_synonym=SC3D11.21;locus_tag=SCO5464
NC_003888.3	RefSeq	CDS	5950361	5950573	.	+	0	ID=cds5413;Parent=gene5519;Dbxref=Genbank:NP_629601.1,GeneID:1100904;Name=NP_629601.1;Note=SC3D11.21%2C possible calcium-binding protein%2C len: 70aa%3B similar to many eukaryotic calcium-binding proteins eg. TR:Q42470 (EMBL:D63153) calcium-binding protein from Brassica rapa (Turnip)%2C and Brassica napus (Rape) (79 aa) fasta scores%3B opt: 153%2C z-score: 214.7%2C E(): 0.00015%2C 45.3%25 identity in 64 aa overlap and SW:P02599 (CALM_DICDI) calmodulin from Dictyostelium discoideum (Slime mold) (151 aa) fasta scores%3B opt: 155%2C z-score: 213.0%2C E(): 0.00019%2C 43.3%25 identity in 60 aa overlap. Contains Pfam match to entry PF00036 efhand%2C EF hand and two Prosite matches to PS00018 EF-hand calcium-binding domain.;gbkey=CDS;gene=SC3D11.21;product=hypothetical protein;protein_id=NP_629601.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5950376	5950462	.	+	.	ID=id7140;Dbxref=GeneID:1100904;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 25.80%2C E-value 0.001;gbkey=misc_feature;gene=SC3D11.21
NC_003888.3	RefSeq	sequence_feature	5950403	5950441	.	+	.	ID=id7141;Dbxref=GeneID:1100904;Note=PS00018 EF-hand calcium-binding domain;gbkey=misc_feature;gene=SC3D11.21
NC_003888.3	RefSeq	sequence_feature	5950514	5950552	.	+	.	ID=id7142;Dbxref=GeneID:1100904;Note=PS00018 EF-hand calcium-binding domain;gbkey=misc_feature;gene=SC3D11.21
NC_003888.3	RefSeq	ribosome_entry_site	5950730	5950734	.	+	.	ID=id7143;gbkey=RBS
NC_003888.3	RefSeq	gene	5950745	5951407	.	+	.	ID=gene5520;Dbxref=GeneID:1100905;Name=SC3D11.22;gbkey=Gene;gene=SC3D11.22;gene_biotype=protein_coding;gene_synonym=SC3D11.22;locus_tag=SCO5465
NC_003888.3	RefSeq	CDS	5950745	5951407	.	+	0	ID=cds5414;Parent=gene5520;Dbxref=Genbank:NP_629602.1,GeneID:1100905;Name=NP_629602.1;Note=SC3D11.22%2C unknown%2C len: 220aa%3B similar to TRNEW:CAB61931 (EMBL:AL133278) hypothetical protein from Streptomyces coelicolor (219 aa) fasta scores%3B opt: 519%2C z-score: 572.9%2C E(): 1.7e-24%2C 45.5%25 identity in 200 aa overlap and TR:O29370 (EMBL:AE001042) hypothetical protein from Archaeoglobus fulgidus fasta scores%3B opt: 181%2C z-score: 208.1%2C E(): 0.00035%2C 26.2%25 identity in 206 aa overlap. also to TR:Q98N90 (EMBL:AP002994) Rhizobium loti (Mesorhizobium loti) MLL0243 protein%2C 231 aa%3B fasta scores: opt: 789 Z-score: 849.5 E(): 1.1e-39%3B 56.164%25 identity in 219 aa overlap;gbkey=CDS;gene=SC3D11.22;product=hypothetical protein;protein_id=NP_629602.1;transl_table=11
NC_003888.3	RefSeq	gene	5951416	5951973	.	-	.	ID=gene5521;Dbxref=GeneID:1100906;Name=SC3D11.23c;gbkey=Gene;gene=SC3D11.23c;gene_biotype=protein_coding;gene_synonym=SC3D11.23c;locus_tag=SCO5466
NC_003888.3	RefSeq	CDS	5951416	5951973	.	-	0	ID=cds5415;Parent=gene5521;Dbxref=Genbank:NP_629603.1,GeneID:1100906;Name=NP_629603.1;Note=SC3D11.23c%2C possible hydrolase%2C len: 185aa%3B similar to many eg. SW:P34020 (LYC_CLOAB) autolytic lysozyme from Clostridium acetobutylicum (324 aa) fasta scores%3B opt: 231%2C z-score: 295.8%2C E(): 4.6e-09%2C 29.3%25 identity in 188 aa overlap.;gbkey=CDS;gene=SC3D11.23c;product=hydrolase;protein_id=NP_629603.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5951978	5951984	.	-	.	ID=id7144;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5952144	5952148	.	+	.	ID=id7145;gbkey=RBS
NC_003888.3	RefSeq	gene	5952154	5952888	.	+	.	ID=gene5522;Dbxref=GeneID:1100907;Name=SC2A11.01;gbkey=Gene;gene=SC2A11.01;gene_biotype=protein_coding;gene_synonym=SC2A11.01,SC3D11.24;locus_tag=SCO5467
NC_003888.3	RefSeq	CDS	5952154	5952888	.	+	0	ID=cds5416;Parent=gene5522;Dbxref=Genbank:NP_733665.1,GeneID:1100907;Name=NP_733665.1;Note=SC2A11.01%2C probable muramoyl-pentapeptide carboxypeptidase%2C partial CDS%2C len: 189 aa%3B highly similar to S. albus CBPM_STRAL muramoyl-pentapeptide carboxypeptidase precursor (EC 3.4.17.8) (255 aa)%2C fasta scores%3B opt: 955 z-score: 1605.0 E(): 0%2C 71.1%25 identity in 190 aa overlap~SC3D11.24%2C possible muramoyl-pentapeptide carboxypeptidase%2C partial CDS%2C len: >88aa%3B similar to the N-terminal region of SW:P00733 (CBPM_STRAL) muramoyl-pentapeptide carboxypeptidase from Streptomyces albus (255 aa);gbkey=CDS;gene=SC2A11.01;product=muramoyl-pentapeptide carboxypeptidase;protein_id=NP_733665.1;transl_table=11
NC_003888.3	RefSeq	gene	5952943	5954361	.	-	.	ID=gene5523;Dbxref=GeneID:1100908;Name=SC2A11.02c;gbkey=Gene;gene=SC2A11.02c;gene_biotype=protein_coding;gene_synonym=SC2A11.02c;locus_tag=SCO5468
NC_003888.3	RefSeq	CDS	5952943	5954361	.	-	0	ID=cds5417;Parent=gene5523;Dbxref=Genbank:NP_629604.1,GeneID:1100908;Name=NP_629604.1;Note=SC2A11.02c%2C probable transmembrane transport protein%2C len: 472 aa%3B similar to many e.g. YHJE_ECOLI hypothetical metabolite transport protein (440 aa)%2C fasta scores%3B opt: 772 z-score: 1638.5 E(): 0%2C 56.7%25 identity in 441 aa overlap and SHIA_ECOLI shikimate transporter (438 aa)%2C fasta scores%3B opt: 553 z-score: 980.0 E(): 0%2C 34.6%25 identity in 437 aa overlap. Contains PS00216 Sugar transport proteins signature 1 and Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporters%2C score 183.10%2C E-value 4.4e-51;gbkey=CDS;gene=SC2A11.02c;product=transmembrane transport protein;protein_id=NP_629604.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5952991	5954307	.	-	.	ID=id7146;Dbxref=GeneID:1100908;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporters%2C score 183.10%2C E-value 4.4e-51;gbkey=misc_feature;gene=SC2A11.02c
NC_003888.3	RefSeq	sequence_feature	5953357	5953410	.	-	.	ID=id7147;Dbxref=GeneID:1100908;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC2A11.02c
NC_003888.3	RefSeq	gene	5954478	5955845	.	-	.	ID=gene5524;Dbxref=GeneID:1100909;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;gene_synonym=sdaA;locus_tag=SCO5469
NC_003888.3	RefSeq	CDS	5954478	5955845	.	-	0	ID=cds5418;Parent=gene5524;Dbxref=Genbank:NP_629605.1,GeneID:1100909;Name=NP_629605.1;Note=SC2A11.03c%2C sdaA%2C probable L-serine dehydratase%2C len: 455 aa%3B highly similar to e.g. SDHL_ECOLI L-serine dehydratase 1 (EC 4.2.1.13) (454 aa)%2C fasta scores%3B opt: 1643 z-score: 1576.6 E(): 0%2C 55.6%25 identity in 459 aa overlap;gbkey=CDS;gene=sdaA;product=L-serine dehydratase;protein_id=NP_629605.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5955851	5955855	.	-	.	ID=id7148;Note=possible RBS upstream of sdaA;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	5955916	5955927	.	+	.	ID=id7149;Note=single clone coverage only;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5955947	5957209	.	-	.	ID=gene5525;Dbxref=GeneID:1100910;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;gene_synonym=glyA2;locus_tag=SCO5470
NC_003888.3	RefSeq	CDS	5955947	5957209	.	-	0	ID=cds5419;Parent=gene5525;Dbxref=Genbank:NP_629606.1,GeneID:1100910;Name=NP_629606.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=NP_629606.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5956046	5957188	.	-	.	ID=id7150;Dbxref=GeneID:1100910;Note=Pfam match to entry PF00464 SHMT%2C Serine hydroxymethyltransferase%2C score 773.50%2C E-value 6.4e-232;gbkey=misc_feature;gene=glyA
NC_003888.3	RefSeq	sequence_feature	5956499	5956549	.	-	.	ID=id7151;Dbxref=GeneID:1100910;Note=PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=glyA
NC_003888.3	RefSeq	gene	5957224	5957601	.	-	.	ID=gene5526;Dbxref=GeneID:1100911;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;gene_synonym=gcvH;locus_tag=SCO5471
NC_003888.3	RefSeq	CDS	5957224	5957601	.	-	0	ID=cds5420;Parent=gene5526;Dbxref=Genbank:NP_629607.1,GeneID:1100911;Name=NP_629607.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;gene=gcvH;product=glycine cleavage system protein H;protein_id=NP_629607.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5957371	5957460	.	-	.	ID=id7152;Dbxref=GeneID:1100911;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site;gbkey=misc_feature;gene=gcvH
NC_003888.3	RefSeq	ribosome_entry_site	5957612	5957616	.	-	.	ID=id7153;Note=possible RBS upstream of gcvH;gbkey=RBS
NC_003888.3	RefSeq	gene	5957728	5958846	.	-	.	ID=gene5527;Dbxref=GeneID:1100912;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=SCO5472
NC_003888.3	RefSeq	CDS	5957728	5958846	.	-	0	ID=cds5421;Parent=gene5527;Dbxref=Genbank:NP_629608.1,GeneID:1100912;Name=NP_629608.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=glycine cleavage system aminomethyltransferase T;protein_id=NP_629608.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5958858	5958861	.	-	.	ID=id7154;Note=possible RBS upstream of gcvT;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	5959259	5959263	.	+	.	ID=id7155;Note=possible RBS upstream of SC2A11.07;gbkey=RBS
NC_003888.3	RefSeq	gene	5959273	5959941	.	+	.	ID=gene5528;Dbxref=GeneID:1100913;Name=SC2A11.07;gbkey=Gene;gene=SC2A11.07;gene_biotype=protein_coding;gene_synonym=SC2A11.07;locus_tag=SCO5473
NC_003888.3	RefSeq	CDS	5959273	5959941	.	+	0	ID=cds5422;Parent=gene5528;Dbxref=Genbank:NP_629609.1,GeneID:1100913;Name=NP_629609.1;Note=SC2A11.07%2C probable ATP/GTP binding protein%2C len: 222 aa%3B contains PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC2A11.07;product=ATP/GTP binding protein;protein_id=NP_629609.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5959453	5959476	.	+	.	ID=id7156;Dbxref=GeneID:1100913;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2A11.07
NC_003888.3	RefSeq	gene	5960021	5960788	.	+	.	ID=gene5529;Dbxref=GeneID:1100914;Name=SC2A11.08;gbkey=Gene;gene=SC2A11.08;gene_biotype=protein_coding;gene_synonym=SC2A11.08;locus_tag=SCO5474
NC_003888.3	RefSeq	CDS	5960021	5960788	.	+	0	ID=cds5423;Parent=gene5529;Dbxref=Genbank:NP_629610.1,GeneID:1100914;Name=NP_629610.1;Note=SC2A11.08%2C unknown%2C len: 255 aa;gbkey=CDS;gene=SC2A11.08;product=hypothetical protein;protein_id=NP_629610.1;transl_table=11
NC_003888.3	RefSeq	gene	5960983	5961780	.	+	.	ID=gene5530;Dbxref=GeneID:1100915;Name=SC2A11.09;gbkey=Gene;gene=SC2A11.09;gene_biotype=protein_coding;gene_synonym=SC2A11.09;locus_tag=SCO5475
NC_003888.3	RefSeq	CDS	5960983	5961780	.	+	0	ID=cds5424;Parent=gene5530;Dbxref=Genbank:NP_629611.1,GeneID:1100915;Name=NP_629611.1;Note=SC2A11.09%2C unknown%2C len: 265 aa;gbkey=CDS;gene=SC2A11.09;product=hypothetical protein;protein_id=NP_629611.1;transl_table=11
NC_003888.3	RefSeq	gene	5962095	5963102	.	+	.	ID=gene5531;Dbxref=GeneID:1100916;Name=SC2A11.10;gbkey=Gene;gene=SC2A11.10;gene_biotype=protein_coding;gene_synonym=SC2A11.10;locus_tag=SCO5476
NC_003888.3	RefSeq	CDS	5962095	5963102	.	+	0	ID=cds5425;Parent=gene5531;Dbxref=Genbank:NP_629612.1,GeneID:1100916;Name=NP_629612.1;Note=SC2A11.10%2C probable oligopeptide transport integral membrane protein%2C len: 335 aa%3B similar to mnay e.g. APPC_BACSU oligopeptide transport permease appC (303 aa)%2C fasta scores%3B opt: 465 z-score: 1038.5 E(): 0%2C 41.4%25 identity in 309 aa overlap. Also similar to S. coelicolor TR:P72406 (EMBL:U68036) bldKA (335 aa)%2C fasta scores%3B opt: 912 z-score: 1192.3 E(): 0%2C 42.1%25 identity in 330 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature and Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 47.00%2C E-value 4.1e-10;gbkey=CDS;gene=SC2A11.10;product=oligopeptide transport integral membrane protein;protein_id=NP_629612.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5962749	5962979	.	+	.	ID=id7157;Dbxref=GeneID:1100916;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 47.00%2C E-value 4.1e-10;gbkey=misc_feature;gene=SC2A11.10
NC_003888.3	RefSeq	sequence_feature	5962752	5962838	.	+	.	ID=id7158;Dbxref=GeneID:1100916;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=misc_feature;gene=SC2A11.10
NC_003888.3	RefSeq	ribosome_entry_site	5963159	5963163	.	+	.	ID=id7159;Note=possible RBS upstream of SC2A11.11;gbkey=RBS
NC_003888.3	RefSeq	gene	5963174	5964976	.	+	.	ID=gene5532;Dbxref=GeneID:1100917;Name=SC2A11.11;gbkey=Gene;gene=SC2A11.11;gene_biotype=protein_coding;gene_synonym=SC2A11.11;locus_tag=SCO5477
NC_003888.3	RefSeq	CDS	5963174	5964976	.	+	0	ID=cds5426;Parent=gene5532;Dbxref=Genbank:NP_629613.1,GeneID:1100917;Name=NP_629613.1;Note=SC2A11.11%2C probable oligopeptide-binding lipoprotein%2C len: 600 aa%3B similar to e.g. OPPA_BACSU oligopeptide-binding protein oppA precursor (545 aa)%2C fasta scores%3B opt: 401 z-score: 242.5 E(): 3e-06%2C 25.5%25 identity in 554 aa overlap Also similar to S. coelicolor TR:P72407 (EMBL:U68036) bldKB (602 aa)%2C fasta scores%3B opt: 702 z-score: 583.5 E(): 3e-25%2C 29.3%25 identity in 614 aa overlap. Contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site%2C and Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 45.60%2C E-value 7.2e-11;gbkey=CDS;gene=SC2A11.11;product=oligopeptide-binding lipoprotein;protein_id=NP_629613.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5963228	5963260	.	+	.	ID=id7160;Dbxref=GeneID:1100917;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC2A11.11
NC_003888.3	RefSeq	sequence_feature	5963498	5963626	.	+	.	ID=id7161;Dbxref=GeneID:1100917;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 45.60%2C E-value 7.2e-11;gbkey=misc_feature;gene=SC2A11.11
NC_003888.3	RefSeq	gene	5965085	5966083	.	+	.	ID=gene5533;Dbxref=GeneID:1100918;Name=SC2A11.12;gbkey=Gene;gene=SC2A11.12;gene_biotype=protein_coding;gene_synonym=SC2A11.12;locus_tag=SCO5478
NC_003888.3	RefSeq	CDS	5965085	5966083	.	+	0	ID=cds5427;Parent=gene5533;Dbxref=Genbank:NP_629614.1,GeneID:1100918;Name=NP_629614.1;Note=SC2A11.12%2C probable oligopeptide transport system integral membrane protein%2C len: 332 aa%3B similar to many e.g. OPPB_ECOLI oligopeptide transport system permease (306 aa)%2C fasta scores%3B opt: 568 z-score: 807.4 E(): 0%2C 35.0%25 identity in 337 aa overlap Also similar to S. coelicolor TR:P72408 (EMBL:U68036) bldKC (323 aa)%2C fasta scores%3B opt: 875 z-score: 1186.1 E(): 0 42.4%25 identity in 337 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature and Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 34.10%2C E-value 3.1e-06;gbkey=CDS;gene=SC2A11.12;product=oligopeptide transport system integral membrane protein;protein_id=NP_629614.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5965748	5965963	.	+	.	ID=id7162;Dbxref=GeneID:1100918;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 34.10%2C E-value 3.1e-06;gbkey=misc_feature;gene=SC2A11.12
NC_003888.3	RefSeq	sequence_feature	5965751	5965837	.	+	.	ID=id7163;Dbxref=GeneID:1100918;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=misc_feature;gene=SC2A11.12
NC_003888.3	RefSeq	ribosome_entry_site	5966071	5966074	.	+	.	ID=id7164;Dbxref=GeneID:1100918;Note=possible RBS upstream of SC2A11.13;gbkey=RBS;gene=SC2A11.12
NC_003888.3	RefSeq	gene	5966080	5967177	.	+	.	ID=gene5534;Dbxref=GeneID:1100919;Name=SC2A11.13;gbkey=Gene;gene=SC2A11.13;gene_biotype=protein_coding;gene_synonym=SC2A11.13;locus_tag=SCO5479
NC_003888.3	RefSeq	CDS	5966080	5967177	.	+	0	ID=cds5428;Parent=gene5534;Dbxref=Genbank:NP_629615.1,GeneID:1100919;Name=NP_629615.1;Note=SC2A11.13%2C probable oligopeptide ABC transporter ATP-binding protein%2C len: 365 aa%3B similar to many e.g. OPPD_BACSU oligopeptide transport ATP-binding protein (336 aa)%2C fasta scores%3B opt: 1089 z-score: 1413.1 E(): 0%2C 52.3%25 identity in 323 aa overlap Also similar to S. coelicolor TR:P72409 (EMBL:U68036) bldKD (353 aa)%2C fasta scores%3B opt: 1396 z-score: 1731.9 E(): 0%2C 58.4%25 identity in 365 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop)%2C PS00211 ABC transporters family signature and Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 203.50%2C E-value 3.3e-57;gbkey=CDS;gene=SC2A11.13;product=oligopeptide ABC transporter ATP-binding protein;protein_id=NP_629615.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5966239	5966847	.	+	.	ID=id7165;Dbxref=GeneID:1100919;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 203.50%2C E-value 3.3e-57;gbkey=misc_feature;gene=SC2A11.13
NC_003888.3	RefSeq	sequence_feature	5966260	5966283	.	+	.	ID=id7166;Dbxref=GeneID:1100919;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2A11.13
NC_003888.3	RefSeq	sequence_feature	5966617	5966661	.	+	.	ID=id7167;Dbxref=GeneID:1100919;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC2A11.13
NC_003888.3	RefSeq	gene	5967174	5968664	.	+	.	ID=gene5535;Dbxref=GeneID:1100920;Name=SC2A11.14;gbkey=Gene;gene=SC2A11.14;gene_biotype=protein_coding;gene_synonym=SC2A11.14;locus_tag=SCO5480
NC_003888.3	RefSeq	CDS	5967174	5968664	.	+	0	ID=cds5429;Parent=gene5535;Dbxref=Genbank:NP_629616.1,GeneID:1100920;Name=NP_629616.1;Note=SC2A11.14%2C probable oligopeptide ABC transporter ATP-binding protein%2C len: 496 aa%3B similar to many e.g. APPF_BACSU oligopeptide transport ATP-binding protein (329 aa)%2C fasta scores%3B opt: 1284 z-score: 1056.3 E(): 0%2C 56.4%25 identity in 326 aa overlap Also similar to S. coelicolor TR:P72410 (EMBL:U68036) bldKE (284 aa)%2C fasta scores%3B opt: 1114 z-score: 1091.6 E(): 0%2C 59.3%25 identity in 280 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop)%2C PS00211 ABC transporters family signature and Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 202.90%2C E-value 4.8e-57. C-terminus contains 13 degenerate repeats of AS(D /S)DA;gbkey=CDS;gene=SC2A11.14;product=oligopeptide ABC transporter ATP-binding protein;protein_id=NP_629616.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5967399	5967971	.	+	.	ID=id7168;Dbxref=GeneID:1100920;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 202.90%2C E-value 4.8e-57;gbkey=misc_feature;gene=SC2A11.14
NC_003888.3	RefSeq	sequence_feature	5967420	5967443	.	+	.	ID=id7169;Dbxref=GeneID:1100920;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2A11.14
NC_003888.3	RefSeq	sequence_feature	5967741	5967785	.	+	.	ID=id7170;Dbxref=GeneID:1100920;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC2A11.14
NC_003888.3	RefSeq	repeat_region	5968410	5968604	.	+	.	ID=id7171;Dbxref=GeneID:1100920;Note=13x15bp degenerate repeats;gbkey=repeat_region;gene=SC2A11.14
NC_003888.3	RefSeq	gene	5968742	5969401	.	+	.	ID=gene5536;Dbxref=GeneID:1100921;Name=SC2A11.15;gbkey=Gene;gene=SC2A11.15;gene_biotype=protein_coding;gene_synonym=SC2A11.15;locus_tag=SCO5481
NC_003888.3	RefSeq	CDS	5968742	5969401	.	+	0	ID=cds5430;Parent=gene5536;Dbxref=Genbank:NP_629617.1,GeneID:1100921;Name=NP_629617.1;Note=SC2A11.15%2C probable integral membrane protein%2C len: 219 aa%3B similar to hypothetical proteins e.g. YADS_ECOLI (207 aa)%2C fasta scores%3B opt: 397 z-score: 543.4 E(): 5.2e-23%2C 36.7%25 identity in 196 aa overlap;gbkey=CDS;gene=SC2A11.15;product=hypothetical protein;protein_id=NP_629617.1;transl_table=11
NC_003888.3	RefSeq	gene	5969537	5970559	.	+	.	ID=gene5537;Dbxref=GeneID:1100922;Name=SC2A11.16;gbkey=Gene;gene=SC2A11.16;gene_biotype=protein_coding;gene_synonym=SC2A11.16;locus_tag=SCO5482
NC_003888.3	RefSeq	CDS	5969537	5970559	.	+	0	ID=cds5431;Parent=gene5537;Dbxref=Genbank:NP_629618.1,GeneID:1100922;Name=NP_629618.1;Note=SC2A11.16%2C unknown%2C len: 340 aa%3B some similarity to M. tuberculosis hypothetical protein YV25_MYCTU MTCY20G9.25%2C Rv0499 (291 aa)%2C fasta scores%3B opt: 240 z-score: 316.7 E(): 2.2e-10%2C 28.9%25 identity in 270 aa overlap;gbkey=CDS;gene=SC2A11.16;product=hypothetical protein;protein_id=NP_629618.1;transl_table=11
NC_003888.3	RefSeq	gene	5970588	5971214	.	-	.	ID=gene5538;Dbxref=GeneID:1100923;Name=SC2A11.17c;gbkey=Gene;gene=SC2A11.17c;gene_biotype=protein_coding;gene_synonym=SC2A11.17c;locus_tag=SCO5483
NC_003888.3	RefSeq	CDS	5970588	5971214	.	-	0	ID=cds5432;Parent=gene5538;Dbxref=Genbank:NP_629619.1,GeneID:1100923;Name=NP_629619.1;Note=SC2A11.17c%2C probable transcriptional regulator%2C len: 208 aa%3B similar to members of the tetR family e.g. TCMR_STRGA tetracenomycin C transcriptional repressor (226 aa)%2C fasta scores%3B opt: 138 z-score: 224.5 E(): 3e-05%2C 26.5%25 identity in 155 aa overlap. Contains helix-turn-helix motif at aa 36-57 (Score 1332%2C +3.72 SD) and Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 23.40%2C E-value 9.9e-05;gbkey=CDS;gene=SC2A11.17c;product=transcriptional regulator;protein_id=NP_629619.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5971050	5971160	.	-	.	ID=id7172;Dbxref=GeneID:1100923;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 23.40%2C E-value 9.9e-05;gbkey=misc_feature;gene=SC2A11.17c;product=transcriptional regulator
NC_003888.3	RefSeq	ribosome_entry_site	5971328	5971332	.	+	.	ID=id7173;Note=RBS upstream of SC2A11.18;gbkey=RBS
NC_003888.3	RefSeq	gene	5971342	5971509	.	+	.	ID=gene5539;Dbxref=GeneID:1100924;Name=SC2A11.18;gbkey=Gene;gene=SC2A11.18;gene_biotype=protein_coding;gene_synonym=SC2A11.18;locus_tag=SCO5484
NC_003888.3	RefSeq	CDS	5971342	5971509	.	+	0	ID=cds5433;Parent=gene5539;Dbxref=Genbank:NP_629620.1,GeneID:1100924;Name=NP_629620.1;Note=SC2A11.18%2C small hydrophobic membrane protein%2C len: 55 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC2A11.18;product=small hydrophobic membrane protein;protein_id=NP_629620.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5971534	5971537	.	+	.	ID=id7174;Note=possible RBS upstream of SC2A1.19;gbkey=RBS
NC_003888.3	RefSeq	gene	5971544	5971837	.	+	.	ID=gene5540;Dbxref=GeneID:1100925;Name=SC2A11.19;gbkey=Gene;gene=SC2A11.19;gene_biotype=protein_coding;gene_synonym=SC2A11.19;locus_tag=SCO5485
NC_003888.3	RefSeq	CDS	5971544	5971837	.	+	0	ID=cds5434;Parent=gene5540;Dbxref=Genbank:NP_629621.1,GeneID:1100925;Name=NP_629621.1;Note=SC2A11.19%2C small hydrophobic membrane protein%2C len: 97 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC2A11.19;product=small hydrophobic membrane protein;protein_id=NP_629621.1;transl_table=11
NC_003888.3	RefSeq	gene	5971928	5973097	.	+	.	ID=gene5541;Dbxref=GeneID:1100926;Name=SC2A11.20;gbkey=Gene;gene=SC2A11.20;gene_biotype=protein_coding;gene_synonym=SC2A11.20;locus_tag=SCO5486
NC_003888.3	RefSeq	CDS	5971928	5973097	.	+	0	ID=cds5435;Parent=gene5541;Dbxref=Genbank:NP_629622.1,GeneID:1100926;Name=NP_629622.1;Note=SC2A11.20%2C probable pyridoxal-phosphate-dependent aminotransferase%2C len: 389 aa%3B similar to many e.g. NIFS_ANASP Anaebaena NifS protein (400 aa)%2C fasta scores%3B opt: 855 z-score: 1070.8 E(): 0%2C 40.4%25 identity in 384 aa overlap and SPL1_CANAL Candida albicans tRNA splicing protein SPL1 (488 aa)%2C fasta scores%3B opt: 791 z-score: 912.8 E(): 0%2C 36.6%25 identity in 388 aa overlap. Contains Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V%2C score 259.00%2C E-value 6.2e-74;gbkey=CDS;gene=SC2A11.20;product=pyridoxal-phosphate-dependent aminotransferase;protein_id=NP_629622.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5971961	5973043	.	+	.	ID=id7175;Dbxref=GeneID:1100926;Note=Pfam match to entry PF00266 aminotran_5%2C Aminotransferases class-V%2C score 259.00%2C E-value 6.2e-74;gbkey=misc_feature;gene=SC2A11.20
NC_003888.3	RefSeq	gene	5973134	5973862	.	-	.	ID=gene5542;Dbxref=GeneID:1100927;Name=SC2A11.21c;gbkey=Gene;gene=SC2A11.21c;gene_biotype=protein_coding;gene_synonym=SC2A11.21c;locus_tag=SCO5487
NC_003888.3	RefSeq	CDS	5973134	5973862	.	-	0	ID=cds5436;Parent=gene5542;Dbxref=Genbank:NP_629623.1,GeneID:1100927;Name=NP_629623.1;Note=SC2A11.21c%2C unknown%2C len: 242 aa%3B some similarity in C-terminus to enterobacterial ampD genes e.g. AMPD_ECOLI AMPD protein (183 aa)%2C fasta scores%3B opt: 210 z-score: 212.6 E(): 0.00014%2C 31.5%25 identity in 149 aa overlapand Enterobacter cloacae TR:Q46957 (EMBL:U40785) anhydro-n-acetylmuramyl-tripeptide amidase (187 aa)%2C fasta scores%3B opt: 207 z-score: 192.0 E(): 0.0019%2C 31.6%25 identity in 155 aa overlap;gbkey=CDS;gene=SC2A11.21c;product=hypothetical protein;protein_id=NP_629623.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	5973915	5973919	.	+	.	ID=id7176;Note=possible RBS upstream of trmU;gbkey=RBS
NC_003888.3	RefSeq	gene	5973924	5975054	.	+	.	ID=gene5543;Dbxref=GeneID:1100928;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=SC2A11.22,trmU;locus_tag=SCO5488
NC_003888.3	RefSeq	CDS	5973924	5975054	.	+	0	ID=cds5437;Parent=gene5543;Dbxref=Genbank:NP_629624.1,GeneID:1100928;Name=NP_629624.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=NP_629624.1;transl_table=11
NC_003888.3	RefSeq	gene	5974936	5975874	.	-	.	ID=gene5544;Dbxref=GeneID:1100929;Name=SC8D9.01c;gbkey=Gene;gene=SC8D9.01c;gene_biotype=protein_coding;gene_synonym=SC8D9.01c;locus_tag=SCO5489
NC_003888.3	RefSeq	CDS	5974936	5975874	.	-	0	ID=cds5438;Parent=gene5544;Dbxref=Genbank:NP_733666.1,GeneID:1100929;Name=NP_733666.1;Note=SC8D9.01c%2C unknown%2C len: >299 aa%3B proline and glycine rich. This CDS lies in a region of DNA with high GC content. The CDS lies in frame 4 and was designated based upon a Hidden Markov algorithm prediction. Note that Frameplot predicts two ORFs at (approx.) 125-500bp and 500-902bp. High quality sequence was obtained for this region from two independent cosmids suggesting that a real frameshift exist on the chromosome;gbkey=CDS;gene=SC8D9.01c;product=hypothetical protein;protein_id=NP_733666.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5974973	5975106	.	+	.	ID=id7177;Note=Overlap with Streptomyces coelicolor cosmid SC2A11.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	5975918	5976259	.	-	.	ID=gene5545;Dbxref=GeneID:1100930;Name=SC8D9.02c;gbkey=Gene;gene=SC8D9.02c;gene_biotype=protein_coding;gene_synonym=SC8D9.02c;locus_tag=SCO5490
NC_003888.3	RefSeq	CDS	5975918	5976259	.	-	0	ID=cds5439;Parent=gene5545;Dbxref=Genbank:NP_629625.1,GeneID:1100930;Name=NP_629625.1;Note=SC8D9.02c%2C small conserved hypothetical protein%2C len: 123aa%3B similar to several eg. TR:P96817 (EMBL:Z92770) hypothetical protein from Mycobacterium tuberculosis (126 aa) fasta scores%3B opt: 279%2C z-score: 348.2%2C E(): 4.4e-12%2C (42.7%25 identity in 110 aa overlap).;gbkey=CDS;gene=SC8D9.02c;product=hypothetical protein;protein_id=NP_629625.1;transl_table=11
NC_003888.3	RefSeq	gene	5976342	5976890	.	+	.	ID=gene5546;Dbxref=GeneID:1100931;Name=SC8D9.03;gbkey=Gene;gene=SC8D9.03;gene_biotype=protein_coding;gene_synonym=SC8D9.03;locus_tag=SCO5491
NC_003888.3	RefSeq	CDS	5976342	5976890	.	+	0	ID=cds5440;Parent=gene5546;Dbxref=Genbank:NP_629626.1,GeneID:1100931;Name=NP_629626.1;Note=SC8D9.03%2C unknown%2C len: 182aa%3B similar to many of undefined function eg. TR:Q49952 (EMBL:U15180) hypothetical protein from Mycobacterium leprae (187 aa) fasta scores%3B opt: 331%2C z-score: 394.0%2C E(): 1.2e-14%2C (36.1%25 identity in 166 aa overlap).;gbkey=CDS;gene=SC8D9.03;product=hypothetical protein;protein_id=NP_629626.1;transl_table=11
NC_003888.3	RefSeq	gene	5976909	5977607	.	+	.	ID=gene5547;Dbxref=GeneID:1100932;Name=SC8D9.04;gbkey=Gene;gene=SC8D9.04;gene_biotype=protein_coding;gene_synonym=SC8D9.04;locus_tag=SCO5492
NC_003888.3	RefSeq	CDS	5976909	5977607	.	+	0	ID=cds5441;Parent=gene5547;Dbxref=Genbank:NP_629627.1,GeneID:1100932;Name=NP_629627.1;Note=SC8D9.04%2C probable oxidoreductase%2C len: 232aa%3B similar to many eg. TR:Q53882 (EMBL:U43704) aklaviketone reductase from Streptomyces sp. strain C5 (251 aa) fasta scores%3B opt: 319%2C z-score: 361.3%2C E(): 8.1e-13%2C (33.3%25 identity in 237 aa overlap). Contains PS00061 Short-chain dehydrogenases/reductases family signature. Also contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 129.20%2C E-value 7.5e-35.;gbkey=CDS;gene=SC8D9.04;product=short chain dehydrogenase;protein_id=NP_629627.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5976921	5977457	.	+	.	ID=id7178;Dbxref=GeneID:1100932;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 129.20%2C E-value 7.5e-35.;gbkey=misc_feature;gene=SC8D9.04
NC_003888.3	RefSeq	sequence_feature	5977308	5977394	.	+	.	ID=id7179;Dbxref=GeneID:1100932;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SC8D9.04
NC_003888.3	RefSeq	gene	5977775	5978770	.	+	.	ID=gene5548;Dbxref=GeneID:1100933;Name=SC8D9.05;gbkey=Gene;gene=SC8D9.05;gene_biotype=protein_coding;gene_synonym=SC8D9.05;locus_tag=SCO5493
NC_003888.3	RefSeq	CDS	5977775	5978770	.	+	0	ID=cds5442;Parent=gene5548;Dbxref=Genbank:NP_629628.1,GeneID:1100933;Name=NP_629628.1;Note=SC8D9.05%2C unknown%2C len: 331aa%3B similar to others of undefined function eg. TR:O53262 (EMBL:AL021287) hypothetical protein from Mycobacterium tuberculosis (337 aa) opt: 774%2C z-score: 895.1%2C E(): 0%2C (43.4%25 identity in 334 aa overlap).;gbkey=CDS;gene=SC8D9.05;product=hypothetical protein;protein_id=NP_629628.1;transl_table=11
NC_003888.3	RefSeq	gene	5978785	5980992	.	+	.	ID=gene5549;Dbxref=GeneID:1100934;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;gene_synonym=SC8D9.06;locus_tag=SCO5494
NC_003888.3	RefSeq	CDS	5978785	5980992	.	+	0	ID=cds5443;Parent=gene5549;Dbxref=Genbank:NP_629629.1,GeneID:1100934;Name=NP_629629.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase LigA;protein_id=NP_629629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5979172	5979261	.	+	.	ID=id7180;Dbxref=GeneID:1100934;Note=PS01055 NAD-dependent DNA ligase signature 1.;gbkey=misc_feature;gene=ligA
NC_003888.3	RefSeq	sequence_feature	5980711	5980980	.	+	.	ID=id7181;Dbxref=GeneID:1100934;Note=Pfam match to entry PF00533 BRCT%2C BRCA1 C Terminus (BRCT) domain%2C score 41.70%2C E-value 1.7e-08.;gbkey=misc_feature;gene=ligA
NC_003888.3	RefSeq	gene	5981250	5983490	.	+	.	ID=gene5550;Dbxref=GeneID:1100935;Name=SC8D9.07;gbkey=Gene;gene=SC8D9.07;gene_biotype=protein_coding;gene_synonym=SC8D9.07;locus_tag=SCO5495
NC_003888.3	RefSeq	CDS	5981250	5983490	.	+	0	ID=cds5444;Parent=gene5550;Dbxref=Genbank:NP_629630.1,GeneID:1100935;Name=NP_629630.1;Note=SC8D9.07%2C possible membrane associated phosphodiesterase%2C len: 746 aa%3B similar to many eg. TR:O87376 (EMBL:AF052518) c-di-GMP phosphodiesterase A from Acetobacter xylinus cdg2 operon (752 aa) fasta scores%3B opt: 959%2C z-score: 1059.2%2C E(): 0%2C (31.7%25 identity in 603 aa overlap). Appears to have two distinct regions with the first 300aa containing several potential membrane spanning hydrophobic regions and the remainder of the protein showing similarity to the phosphodiesterase mentioned above. Also similar to a nearby gene on the same cosmid (SC8D9.22) fasta scores%3B opt: 736%2C z-score: 625.6%2C E(): 5.3e-30%2C (32.6%25 identity in 729 aa overlap). Contains TTA Leu codon%2C possible target for bldA regulation. Also contains Pfam match to entry PF00990 DUF9%2C Domain of unknown function%2C score 166.70%2C E-value 3.9e-46 and Pfam match to entry PF00563 DUF2%2C Domain of unknown function 2%2C score 291.30%2C E-value 1.2e-83. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8D9.07;product=phosphodiesterase;protein_id=NP_629630.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5982141	5982635	.	+	.	ID=id7182;Dbxref=GeneID:1100935;Note=Pfam match to entry PF00990 DUF9%2C Domain of unknown function%2C score 166.70%2C E-value 3.9e-46;gbkey=misc_feature;gene=SC8D9.07
NC_003888.3	RefSeq	sequence_feature	5982420	5982422	.	+	.	ID=id7183;Dbxref=GeneID:1100935;Note=TTA Leu codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SC8D9.07
NC_003888.3	RefSeq	sequence_feature	5982672	5983406	.	+	.	ID=id7184;Dbxref=GeneID:1100935;Note=Pfam match to entry PF00563 DUF2%2C Domain of unknown function 2%2C score 291.30%2C E-value 1.2e-83;gbkey=misc_feature;gene=SC8D9.07
NC_003888.3	RefSeq	gene	5983774	5984145	.	+	.	ID=gene5551;Dbxref=GeneID:1100936;Name=SC8D9.08;gbkey=Gene;gene=SC8D9.08;gene_biotype=protein_coding;gene_synonym=SC8D9.08;locus_tag=SCO5496
NC_003888.3	RefSeq	CDS	5983774	5984145	.	+	0	ID=cds5445;Parent=gene5551;Dbxref=Genbank:NP_629631.1,GeneID:1100936;Name=NP_629631.1;Note=SC8D9.08%2C small hydrophobic membrane protein%2C len: 123 aa%3B no significant database similarities. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8D9.08;product=small membrane hydrophobic protein;protein_id=NP_629631.1;transl_table=11
NC_003888.3	RefSeq	gene	5984177	5984671	.	+	.	ID=gene5552;Dbxref=GeneID:1100937;Name=SC8D9.09;gbkey=Gene;gene=SC8D9.09;gene_biotype=protein_coding;gene_synonym=SC8D9.09;locus_tag=SCO5497
NC_003888.3	RefSeq	CDS	5984177	5984671	.	+	0	ID=cds5446;Parent=gene5552;Dbxref=Genbank:NP_629632.1,GeneID:1100937;Name=NP_629632.1;Note=SC8D9.09%2C unknown%2C len: 164aa%3B similar to many of undefined function eg. TR:O06336 (EMBL:Z95390) hypothetical protein from Mycobacterium tuberculosis (177 aa) fasta scores%3B opt: 171%2C z-score: 213.4%2C E(): 0.00014%2C (34.9%25 identity in 109 aa overlap).;gbkey=CDS;gene=SC8D9.09;product=hypothetical protein;protein_id=NP_629632.1;transl_table=11
NC_003888.3	RefSeq	gene	5984816	5985112	.	+	.	ID=gene5553;Dbxref=GeneID:1100938;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;gene_synonym=SC8D9.10;locus_tag=SCO5498
NC_003888.3	RefSeq	CDS	5984816	5985112	.	+	0	ID=cds5447;Parent=gene5553;Dbxref=Genbank:NP_629633.1,GeneID:1100938;Name=NP_629633.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA%3B some Mycoplasma proteins contain an N-terminal fusion to an unknown domain;gbkey=CDS;gene=gatC;product=aspartyl/glutamyl-tRNA amidotransferase subunit C;protein_id=NP_629633.1;transl_table=11
NC_003888.3	RefSeq	gene	5985116	5986609	.	+	.	ID=gene5554;Dbxref=GeneID:1100939;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;gene_synonym=SC8D9.11;locus_tag=SCO5499
NC_003888.3	RefSeq	CDS	5985116	5986609	.	+	0	ID=cds5448;Parent=gene5554;Dbxref=Genbank:NP_629634.1,GeneID:1100939;Name=NP_629634.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatA;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=NP_629634.1;transl_table=11
NC_003888.3	RefSeq	gene	5986606	5986845	.	+	.	ID=gene5555;Dbxref=GeneID:1100940;Name=SC8D9.12;gbkey=Gene;gene=SC8D9.12;gene_biotype=protein_coding;gene_synonym=SC8D9.12;locus_tag=SCO5500
NC_003888.3	RefSeq	CDS	5986606	5986845	.	+	0	ID=cds5449;Parent=gene5555;Dbxref=Genbank:NP_629635.1,GeneID:1100940;Name=NP_629635.1;Note=SC8D9.12%2C membrane protein%2C len: 79 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8D9.12;product=hypothetical protein;protein_id=NP_629635.1;transl_table=11
NC_003888.3	RefSeq	gene	5986861	5988375	.	+	.	ID=gene5556;Dbxref=GeneID:1100941;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;gene_synonym=SC8D9.13;locus_tag=SCO5501
NC_003888.3	RefSeq	CDS	5986861	5988375	.	+	0	ID=cds5450;Parent=gene5556;Dbxref=Genbank:NP_629636.1,GeneID:1100941;Name=NP_629636.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatB;product=aspartyl/glutamyl-tRNA amidotransferase subunit B;protein_id=NP_629636.1;transl_table=11
NC_003888.3	RefSeq	gene	5988617	5990863	.	+	.	ID=gene5557;Dbxref=GeneID:1100942;Name=SC8D9.14;gbkey=Gene;gene=SC8D9.14;gene_biotype=protein_coding;gene_synonym=SC8D9.14;locus_tag=SCO5502
NC_003888.3	RefSeq	CDS	5988617	5990863	.	+	0	ID=cds5451;Parent=gene5557;Dbxref=Genbank:NP_629637.1,GeneID:1100942;Name=NP_629637.1;Note=SC8D9.14%2C possible integral membrane export protein%2C len: 748aa%3B similar to many eg. TR:Q53902 (EMBL:M64683) an intergral membrane protein involved in the export of actinorhodin from Streptomyces coelicolor (711 aa) fasta scores%3B opt: 353%2C z-score: 385.2%2C E(): 3.8e-14%2C (28.2%25 identity in 731 aa overlap).;gbkey=CDS;gene=SC8D9.14;product=integral membrane export protein;protein_id=NP_629637.1;transl_table=11
NC_003888.3	RefSeq	gene	5990841	5991425	.	+	.	ID=gene5558;Dbxref=GeneID:1100943;Name=SC8D9.15;gbkey=Gene;gene=SC8D9.15;gene_biotype=protein_coding;gene_synonym=SC8D9.15;locus_tag=SCO5503
NC_003888.3	RefSeq	CDS	5990841	5991425	.	+	0	ID=cds5452;Parent=gene5558;Dbxref=Genbank:NP_629638.1,GeneID:1100943;Name=NP_629638.1;Note=SC8D9.15%2C possible acetyltransferase%2C len: 194aa%3B similar to many eg. TR:P96579 (EMBL:AB001488) probable acetyltransferase from Bacillus subtilis (183 aa) fasta scores%3B opt: 250%2C z-score: 327.1%2C E(): 6.5e-11%2C (27.9%25 identity in 172 aa overlap);gbkey=CDS;gene=SC8D9.15;product=acetyltransferase;protein_id=NP_629638.1;transl_table=11
NC_003888.3	RefSeq	gene	5991461	5992087	.	+	.	ID=gene5559;Dbxref=GeneID:1100944;Name=SC8D9.16;gbkey=Gene;gene=SC8D9.16;gene_biotype=protein_coding;gene_synonym=SC8D9.16;locus_tag=SCO5504
NC_003888.3	RefSeq	CDS	5991461	5992087	.	+	0	ID=cds5453;Parent=gene5559;Dbxref=Genbank:NP_629639.1,GeneID:1100944;Name=NP_629639.1;Note=SC8D9.16%2C possible integral membrane protein%2C len: 208aa%3B alanine-rich%2C contains possible membrane spanning regions.;gbkey=CDS;gene=SC8D9.16;product=hypothetical protein;protein_id=NP_629639.1;transl_table=11
NC_003888.3	RefSeq	gene	5992283	5992468	.	+	.	ID=gene5560;Dbxref=GeneID:1100945;Name=SC8D9.17;gbkey=Gene;gene=SC8D9.17;gene_biotype=protein_coding;gene_synonym=SC8D9.17;locus_tag=SCO5505
NC_003888.3	RefSeq	CDS	5992283	5992468	.	+	0	ID=cds5454;Parent=gene5560;Dbxref=Genbank:NP_629640.1,GeneID:1100945;Name=NP_629640.1;Note=SC8D9.17%2C unknown%2C len: 61 aa;gbkey=CDS;gene=SC8D9.17;product=hypothetical protein;protein_id=NP_629640.1;transl_table=11
NC_003888.3	RefSeq	gene	5992465	5995740	.	+	.	ID=gene5561;Dbxref=GeneID:1100946;Name=SC8D9.18;gbkey=Gene;gene=SC8D9.18;gene_biotype=protein_coding;gene_synonym=SC8D9.18;locus_tag=SCO5506
NC_003888.3	RefSeq	CDS	5992465	5995740	.	+	0	ID=cds5455;Parent=gene5561;Dbxref=Genbank:NP_629641.1,GeneID:1100946;Name=NP_629641.1;Note=SC8D9.18%2C possible regulatory protein%2C len: 1091 aa%3B limited similarity to many proteins associated with regulatory functions e.g. C-terminal similarity with C-terminal of TR:O86603 (EMBL:AL031155)  transcriptional regulator from Streptomyces coelicolor (892 aa) fasta scores%3B opt: 245%2C z-score: 254.6%2C E(): 7.1e-07%2C (30.6%25 identity in 451 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop) and a probable helix-turn-helix at 1036-1057aa (+3.98 SD). Also contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 82.70%2C E-value 7.8e-21.;gbkey=CDS;gene=SC8D9.18;product=regulatory protein;protein_id=NP_629641.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5992771	5992794	.	+	.	ID=id7185;Dbxref=GeneID:1100946;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC8D9.18
NC_003888.3	RefSeq	sequence_feature	5995513	5995710	.	+	.	ID=id7186;Dbxref=GeneID:1100946;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 82.70%2C E-value 7.8e-21;gbkey=misc_feature;gene=SC8D9.18
NC_003888.3	RefSeq	gene	5995778	5995987	.	+	.	ID=gene5562;Dbxref=GeneID:1100947;Name=SC8D9.19;gbkey=Gene;gene=SC8D9.19;gene_biotype=protein_coding;gene_synonym=SC8D9.19;locus_tag=SCO5507
NC_003888.3	RefSeq	CDS	5995778	5995987	.	+	0	ID=cds5456;Parent=gene5562;Dbxref=Genbank:NP_629642.1,GeneID:1100947;Name=NP_629642.1;Note=SC8D9.19%2C unknown%2C len: 69 aa;gbkey=CDS;gene=SC8D9.19;product=hypothetical protein;protein_id=NP_629642.1;transl_table=11
NC_003888.3	RefSeq	gene	5995996	5997339	.	-	.	ID=gene5563;Dbxref=GeneID:1100948;Name=SC8D9.20c;gbkey=Gene;gene=SC8D9.20c;gene_biotype=protein_coding;gene_synonym=SC8D9.20c;locus_tag=SCO5508
NC_003888.3	RefSeq	CDS	5995996	5997339	.	-	0	ID=cds5457;Parent=gene5563;Dbxref=Genbank:NP_629643.1,GeneID:1100948;Name=NP_629643.1;Note=SC8D9.20c%2C possible oxidoreductase%2C len: 447aa%3B similar to many of undefined function and SW:DHGB_ACICA glucose dehydrogenase-B from Acinetobacter calcoaceticus (478 aa) fasta scores%3B opt: 247%2C z-score: 253.8%2C E(): 7.9e-07%2C (27.4%25 identity in 369 aa overlap).;gbkey=CDS;gene=SC8D9.20c;product=oxidoreductase;protein_id=NP_629643.1;transl_table=11
NC_003888.3	RefSeq	gene	5997336	5998268	.	-	.	ID=gene5564;Dbxref=GeneID:1100949;Name=SC8D9.21c;gbkey=Gene;gene=SC8D9.21c;gene_biotype=protein_coding;gene_synonym=SC8D9.21c;locus_tag=SCO5509
NC_003888.3	RefSeq	CDS	5997336	5998268	.	-	0	ID=cds5458;Parent=gene5564;Dbxref=Genbank:NP_629644.1,GeneID:1100949;Name=NP_629644.1;Note=SC8D9.21c%2C probable oxidoreductase%2C len: 447aa%3B similar to many both prokaryotic and eukaryotic egs. SW:A115_TOBAC auxin induced protein (probable oxidoreductase) from Nicotiana tabacum (common tobacco) (307 aa) fasta scores%3B opt: 391%2C z-score: 456.6%2C E(): 4e-18%2C (36.7%25 identity in 289 aa overlap) and TR:O07152 (EMBL:Z96801) oxidoreductase from Mycobacterium leprae (306 aa) fasta scores%3B opt: 336%2C z-score: 393.5%2C E(): 1.3e-14%2C (30.8%25 identity in 295 aa overlap). Contains Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 33.70%2C E-value 4.6e-09.;gbkey=CDS;gene=SC8D9.21c;product=oxidoreductase;protein_id=NP_629644.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5997873	5998031	.	-	.	ID=id7187;Dbxref=GeneID:1100949;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 33.70%2C E-value 4.6e-09;gbkey=misc_feature;gene=SC8D9.21c
NC_003888.3	RefSeq	gene	5998409	5999350	.	+	.	ID=gene5565;Dbxref=GeneID:1100950;Name=SC8D9.22;gbkey=Gene;gene=SC8D9.22;gene_biotype=protein_coding;gene_synonym=SC8D9.22;locus_tag=SCO5510
NC_003888.3	RefSeq	CDS	5998409	5999350	.	+	0	ID=cds5459;Parent=gene5565;Dbxref=Genbank:NP_629645.1,GeneID:1100950;Name=NP_629645.1;Note=SC8D9.22%2C probable dehydrogenase%2C len: 313aa%3B similar to many both eukaryotic and prokaryotic egs. SW:FDH_SOLTU NAD-dependent formate dehydrogenase from the mitochondria of Solanum tuberosum (potato) (379 aa) fasta scores%3B opt: 372%2C z-score: 413.2%2C E(): 1e-15%2C (29.9%25 identity in 278 aa overlap) and SW:SERA_BACSU D-3-phosphoglycerate dehydrogenase from Bacillus subtilis (525 aa) fasta scores%3B opt: 348%2C z-score: 384.9%2C E(): 3.9e-14%2C (32.4%25 identity in 256 aa overlap). Contains PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3 and Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 147.40%2C E-value 5.1e-60.;gbkey=CDS;gene=SC8D9.22;product=dehydrogenase;protein_id=NP_629645.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	5998703	5999233	.	+	.	ID=id7188;Dbxref=GeneID:1100950;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 147.40%2C E-value 5.1e-60;gbkey=misc_feature;gene=SC8D9.22
NC_003888.3	RefSeq	sequence_feature	5999057	5999107	.	+	.	ID=id7189;Dbxref=GeneID:1100950;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;gbkey=misc_feature;gene=SC8D9.22
NC_003888.3	RefSeq	gene	5999549	6002875	.	+	.	ID=gene5566;Dbxref=GeneID:1100951;Name=SC8D9.23;gbkey=Gene;gene=SC8D9.23;gene_biotype=protein_coding;gene_synonym=SC8D9.23;locus_tag=SCO5511
NC_003888.3	RefSeq	CDS	5999549	6002875	.	+	0	ID=cds5460;Parent=gene5566;Dbxref=Genbank:NP_629646.1,GeneID:1100951;Name=NP_629646.1;Note=SC8D9.23%2C possible large membrane associated phophodiesterase %2C len: 1108aa%3B the first 400aa of this protein appear to contain several potential membrane spanning regions. The remainder shows similarity to several eg. TR:O87378 (EMBL:AF052519) C-DI-GMP phophodiesterase A from Acetobacter xylinum (740 aa) fasta scores%3B opt: 683%2C z-score: 565.4%2C E(): 3.4e-24%2C (27.3%25 identity in 645 aa overlap). Also similar to a nearby gene on the same cosmid (SC8D9.07) fasta scores%3B opt: 736%2C z-score: 499.5%2C E(): 5.6e-23%2C (32.4%25 identity in 728 aa overlap). Contains Pfam match to entries PF00989 PAS%2C PAS domain%2C score 34.90%2C E-value 1.8e-06%2C PF00990 DUF9%2C Domain of unknown function%2C score 167.40%2C E-value 2.3e-46 and PF00563 DUF2%2C Domain of unknown function 2%2C score 152.30%2C E-value 8.3e-42.;gbkey=CDS;gene=SC8D9.23;product=membrane associated phophodiesterase;protein_id=NP_629646.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6001007	6001201	.	+	.	ID=id7190;Dbxref=GeneID:1100951;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 34.90%2C E-value 1.8e-06;gbkey=misc_feature;gene=SC8D9.23
NC_003888.3	RefSeq	sequence_feature	6001358	6001882	.	+	.	ID=id7191;Dbxref=GeneID:1100951;Note=Pfam match to entry PF00990 DUF9%2C Domain of unknown function%2C score 167.40%2C E-value 2.3e-46;gbkey=misc_feature;gene=SC8D9.23
NC_003888.3	RefSeq	sequence_feature	6001922	6002662	.	+	.	ID=id7192;Dbxref=GeneID:1100951;Note=Pfam match to entry PF00563 DUF2%2C Domain of unknown function 2%2C score 152.30%2C E-value 8.3e-42;gbkey=misc_feature;gene=SC8D9.23
NC_003888.3	RefSeq	gene	6003117	6004958	.	+	.	ID=gene5567;Dbxref=GeneID:1100952;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;gene_synonym=ilvB,SC8D9.24;locus_tag=SCO5512
NC_003888.3	RefSeq	CDS	6003117	6004958	.	+	0	ID=cds5461;Parent=gene5567;Dbxref=Genbank:NP_629647.1,GeneID:1100952;Name=NP_629647.1;Note=acetolactate synthase large subunit%3B catalyzes the formation of 2-acetolactate from pyruvate;gbkey=CDS;gene=ilvB;product=acetolactate synthase 1 catalytic subunit;protein_id=NP_629647.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6003219	6004844	.	+	.	ID=id7193;Dbxref=GeneID:1100952;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes%2C score 899.00%2C E-value 3.2e-278;gbkey=misc_feature;gene=ilvB
NC_003888.3	RefSeq	sequence_feature	6004467	6004526	.	+	.	ID=id7194;Dbxref=GeneID:1100952;Note=PS00187 Thiamine pyrophosphate enzymes signature.;gbkey=misc_feature;gene=ilvB
NC_003888.3	RefSeq	gene	6004980	6005504	.	+	.	ID=gene5568;Dbxref=GeneID:1100953;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;gene_synonym=ilvN,SC8D9.25;locus_tag=SCO5513
NC_003888.3	RefSeq	CDS	6004980	6005504	.	+	0	ID=cds5462;Parent=gene5568;Dbxref=Genbank:NP_629648.1,GeneID:1100953;Name=NP_629648.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase small subunit;protein_id=NP_629648.1;transl_table=11
NC_003888.3	RefSeq	gene	6005643	6006641	.	+	.	ID=gene5569;Dbxref=GeneID:1100954;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;gene_synonym=ilvC,SC8D9.26;locus_tag=SCO5514
NC_003888.3	RefSeq	CDS	6005643	6006641	.	+	0	ID=cds5463;Parent=gene5569;Dbxref=Genbank:NP_629649.1,GeneID:1100954;Name=NP_629649.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;gene=ilvC;product=ketol-acid reductoisomerase;protein_id=NP_629649.1;transl_table=11
NC_003888.3	RefSeq	gene	6006860	6008449	.	+	.	ID=gene5570;Dbxref=GeneID:1100955;Name=SC8D9.27;gbkey=Gene;gene=SC8D9.27;gene_biotype=protein_coding;gene_synonym=SC8D9.27,serA;locus_tag=SCO5515
NC_003888.3	RefSeq	CDS	6006860	6008449	.	+	0	ID=cds5464;Parent=gene5570;Dbxref=Genbank:NP_629650.1,GeneID:1100955;Name=NP_629650.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;gene=SC8D9.27;product=D-3-phosphoglycerate dehydrogenase;protein_id=NP_629650.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6007085	6007699	.	+	.	ID=id7195;Dbxref=GeneID:1100955;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 256.90%2C E-value 7e-105;gbkey=misc_feature;gene=SC8D9.27
NC_003888.3	RefSeq	sequence_feature	6007292	6007375	.	+	.	ID=id7196;Dbxref=GeneID:1100955;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;gbkey=misc_feature;gene=SC8D9.27
NC_003888.3	RefSeq	sequence_feature	6007436	6007504	.	+	.	ID=id7197;Dbxref=GeneID:1100955;Note=PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2.;gbkey=misc_feature;gene=SC8D9.27
NC_003888.3	RefSeq	gene	6008515	6010080	.	-	.	ID=gene5571;Dbxref=GeneID:1100956;Name=SC8D9.28c;gbkey=Gene;gene=SC8D9.28c;gene_biotype=protein_coding;gene_synonym=SC8D9.28c;locus_tag=SCO5516
NC_003888.3	RefSeq	CDS	6008515	6010080	.	-	0	ID=cds5465;Parent=gene5571;Dbxref=Genbank:NP_629651.1,GeneID:1100956;Name=NP_629651.1;Note=SC8D9.28c%2C probable integral membrane efflux protein%2C len: 521aa%3B Similar to many efflux proteins (confirmed and proposed) most of which appear to be dedicated to drug resistance/export egs. TR:O33968 (EMBL:U80063) transmembrane%2C proton-dependent transport protein from Streptomyces cinnamomeus (519 aa) fasta scores%3B opt: 1342%2C z-score: 1386.9%2C E(): 0%2C (46.5%25 identity in 503 aa overlap) and TR:O52557 (EMBL:AF040570) rifamycin efflux protein from Amycolatopsis mediterranei (522 aa) fasta scores%3B opt: 988%2C z-score: 1022.7%2C E(): 0%2C (38.0%25 identity in 523 aa overlap). Contains multiple potential membrane spanning regions.;gbkey=CDS;gene=SC8D9.28c;product=integral membrane efflux protein;protein_id=NP_629651.1;transl_table=11
NC_003888.3	RefSeq	gene	6010146	6010736	.	+	.	ID=gene5572;Dbxref=GeneID:1100957;Name=SC8D9.29;gbkey=Gene;gene=SC8D9.29;gene_biotype=protein_coding;gene_synonym=SC8D9.29;locus_tag=SCO5517
NC_003888.3	RefSeq	CDS	6010146	6010736	.	+	0	ID=cds5466;Parent=gene5572;Dbxref=Genbank:NP_629652.1,GeneID:1100957;Name=NP_629652.1;Note=SC8D9.29%2C possible transcriptional regulator%2C len: 196 aa%3B some similarity to many e.g. TR:O34381 (EMBL:Z99112) PksA%2C transcriptional regulator%2C involved in regulation of the polyketide synthase operon in Bacillus subtilis (205 aa) fasta scores%3B opt: 108%2C z-score: 141.0%2C E(): 1.5%2C (32.1%25 identity in 56 aa overlap) and TR:O86510 (EMBL:AL031124) transcriptional regulator from Streptomyces coelicolor (200 aa) fasta scores%3B opt: 135%2C z-score: 173.7%2C E(): 0.023%2C (30.9%25 identity in 139 aa overlap).;gbkey=CDS;gene=SC8D9.29;product=transcriptional regulator;protein_id=NP_629652.1;transl_table=11
NC_003888.3	RefSeq	gene	6010717	6011964	.	-	.	ID=gene5573;Dbxref=GeneID:1100958;Name=SC8D9.30c;gbkey=Gene;gene=SC8D9.30c;gene_biotype=protein_coding;gene_synonym=SC8D9.30c;locus_tag=SCO5518
NC_003888.3	RefSeq	CDS	6010717	6011964	.	-	0	ID=cds5467;Parent=gene5573;Dbxref=Genbank:NP_629653.1,GeneID:1100958;Name=NP_629653.1;Note=SC8D9.30c%2C possible transcriptional regulator%2C len: 521 aa%3B some similarity to TR:Q00509 (EMBL:X63451) SrmR%2C regulatory gene governing the expression of a polyketide synthase gene in Streptomyces ambofaciens (604 aa) fasta scores%3B opt: 142%2C z-score: 152.0%2C E(): 0.37%2C (28.1%25 identity in 228 aa overlap). Also similar to TR:E1359977 (EMBL:AL034492) transcriptional regulator from Streptomyces coelicolor (569 aa) fasta scores%3B opt: 204%2C z-score: 216.7%2C E(): 9.1e-05%2C (28.6%25 identity in 448 aa overlap). Contains possible helix-turn-helix at 367-388 aa (+2.83 SD).;gbkey=CDS;gene=SC8D9.30c;product=transcriptional regulator;protein_id=NP_629653.1;transl_table=11
NC_003888.3	RefSeq	gene	6012130	6013056	.	+	.	ID=gene5574;Dbxref=GeneID:1100959;Name=SC8D9.31;gbkey=Gene;gene=SC8D9.31;gene_biotype=protein_coding;gene_synonym=SC8D9.31;locus_tag=SCO5519
NC_003888.3	RefSeq	CDS	6012130	6013056	.	+	0	ID=cds5468;Parent=gene5574;Dbxref=Genbank:NP_629654.1,GeneID:1100959;Name=NP_629654.1;Note=SC8D9.31%2C unknown%2C len: 308aa%3B similar to proteins of undefined function eg. TR:O50444 (EMBL:AL010186) from Mycobacterium tuberculosis (329 aa) fasta scores%3B opt: 984%2C z-score: 1121.1%2C E(): 0%2C (50.0%25 identity in 312 aa overlap).;gbkey=CDS;gene=SC8D9.31;product=hypothetical protein;protein_id=NP_629654.1;transl_table=11
NC_003888.3	RefSeq	gene	6013103	6014743	.	+	.	ID=gene5575;Dbxref=GeneID:1100960;Name=SC1C2.01;gbkey=Gene;gene=SC1C2.01;gene_biotype=protein_coding;gene_synonym=SC1C2.01,SC8D9.32;locus_tag=SCO5520
NC_003888.3	RefSeq	CDS	6013103	6014743	.	+	0	ID=cds5469;Parent=gene5575;Dbxref=Genbank:NP_733667.1,GeneID:1100960;Name=NP_733667.1;Note=SC1C2.01%2C probable delta-1-pyrroline-5-carboxylate dehydrogenase%2C partial CDS%2C len >408 aa%3B similar to many e.g. TR:O50443 (EMBL:AL010186) delta-1-pyrroline-5-carboxylate dehydrogenase (M. tuberculosis) (543 aa)%2C fasta scores%3B opt: 1753 z-score: 2214.2 E(): 0%2C 65.1%25 identity in 407 aa overlap%2C and PUT2_HUMAN delta-1-pyrroline-5-carboxylate dehydrogenase (563 aa)%2C fasta scores%3B opt: 1273 z-score: 1730.4 E(): 0%2C 48.5%25 identity in 408 aa overlap. Contains PS00687 and PS00070 Aldehyde dehydrogenases glutamic acid active site and cysteine active site and Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenases%2C score 114.70%2C E-value 1.8e-30~SC8D9.32%2C partial CDS%2C probable pyrroline-5-carboxylate dehydrogenase%2C len: >182aa%3B similar to many eg. TR:O50443 (EMBL:AL010186) RocA%2C probable pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis (543 aa) fasta scores%3B opt: 843%2C z-score: 1024.6%2C E(): 0%2C (66.5%25 identity in 182 aa overlap) and SW:PUT2_AGABI PruA%2C delta 1-pyrroline-5-carboxylate dehydrogenase from Agaricus bisporus (common mushroom) (546 aa) fasta scores%3B opt: 521%2C z-score: 634.9%2C E(): 4.7e-28%2C (44.5%25 identity in 182 aa overlap).;gbkey=CDS;gene=SC1C2.01;product=1-pyrroline-5-carboxylate dehydrogenase;protein_id=NP_733667.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6013516	6017322	.	+	.	ID=id7198;Note=true overlap with cosmid 8D9;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6013517	6014704	.	+	.	ID=id7199;Dbxref=GeneID:1100960;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenases%2C score 114.70%2C E-value 1.8e-30;gbkey=misc_feature;gene=SC1C2.01
NC_003888.3	RefSeq	sequence_feature	6013979	6014002	.	+	.	ID=id7200;Dbxref=GeneID:1100960;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SC1C2.01
NC_003888.3	RefSeq	sequence_feature	6014063	6014098	.	+	.	ID=id7201;Dbxref=GeneID:1100960;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SC1C2.01
NC_003888.3	RefSeq	stem_loop	6014761	6014798	.	+	.	ID=id7202;Note=hairpin_loop with 18bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	6015037	6015042	.	+	.	ID=id7203;Note=possible RBS upstream of SC1C2.02;gbkey=RBS
NC_003888.3	RefSeq	gene	6015052	6015183	.	+	.	ID=gene5576;Dbxref=GeneID:1100961;Name=SC1C2.02;gbkey=Gene;gene=SC1C2.02;gene_biotype=protein_coding;gene_synonym=SC1C2.02;locus_tag=SCO5521
NC_003888.3	RefSeq	CDS	6015052	6015183	.	+	0	ID=cds5470;Parent=gene5576;Dbxref=Genbank:NP_629655.1,GeneID:1100961;Name=NP_629655.1;Note=SC1C2.02%2C questionable ORF%2C len: 43 aa;gbkey=CDS;gene=SC1C2.02;product=hypothetical protein;protein_id=NP_629655.1;transl_table=11
NC_003888.3	RefSeq	gene	6015259	6016302	.	+	.	ID=gene5577;Dbxref=GeneID:1100962;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;gene_synonym=leuB;locus_tag=SCO5522
NC_003888.3	RefSeq	CDS	6015259	6016302	.	+	0	ID=cds5471;Parent=gene5577;Dbxref=Genbank:NP_629656.1,GeneID:1100962;Name=NP_629656.1;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;gbkey=CDS;gene=leuB;product=3-isopropylmalate dehydrogenase;protein_id=NP_629656.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6015274	6016281	.	+	.	ID=id7204;Dbxref=GeneID:1100962;Note=Pfam match to entry PF00180 isodh%2C Isocitrate and isopropylmalate dehydrogenases%2C score 356.60%2C E-value 1.3e-105;gbkey=misc_feature;gene=leuB
NC_003888.3	RefSeq	sequence_feature	6015973	6016032	.	+	.	ID=id7205;Dbxref=GeneID:1100962;Note=PS00470 Isocitrate and isopropylmalate dehydrogenases signature;gbkey=misc_feature;gene=leuB
NC_003888.3	RefSeq	ribosome_entry_site	6016553	6016557	.	+	.	ID=id7206;Note=possible RBS upstream of ilvE;gbkey=RBS
NC_003888.3	RefSeq	gene	6016567	6017655	.	+	.	ID=gene5578;Dbxref=GeneID:1100963;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;gene_synonym=ilvE;locus_tag=SCO5523
NC_003888.3	RefSeq	CDS	6016567	6017655	.	+	0	ID=cds5472;Parent=gene5578;Dbxref=Genbank:NP_629657.1,GeneID:1100963;Name=NP_629657.1;Note=catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids;gbkey=CDS;gene=ilvE;product=branched-chain amino acid aminotransferase;protein_id=NP_629657.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6017278	6017367	.	+	.	ID=id7207;Dbxref=GeneID:1100963;Note=PS00770 Aminotransferases class-IV signature;gbkey=misc_feature;gene=ilvE
NC_003888.3	RefSeq	gene	6017729	6019159	.	-	.	ID=gene5579;Dbxref=GeneID:1100964;Name=SC1C2.05c;gbkey=Gene;gene=SC1C2.05c;gene_biotype=protein_coding;gene_synonym=SC1C2.05c;locus_tag=SCO5524
NC_003888.3	RefSeq	CDS	6017729	6019159	.	-	0	ID=cds5473;Parent=gene5579;Dbxref=Genbank:NP_629658.1,GeneID:1100964;Name=NP_629658.1;Note=SC1C2.05c%2C possible transmembrane transport protein%2C len: 476 aa%3B similar to e.g. B. subtilis TR:P94369 (EMBL:D83026) yxlA (homologous to purine-cytosine permease) (457 aa)%2C fasta scores%3B opt: 235 z-score: 377.4 E(): 9e-14%2C 24.0%25 identity in 475 aa overlap;gbkey=CDS;gene=SC1C2.05c;product=transmembrane transport protein;protein_id=NP_629658.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6019168	6019172	.	-	.	ID=id7208;Note=possible RBS upstream of SC1C2.05c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6019288	6019295	.	+	.	ID=id7209;Note=possible RBS upstream of ureAB;gbkey=RBS
NC_003888.3	RefSeq	gene	6019304	6019987	.	+	.	ID=gene5580;Dbxref=GeneID:1100965;Name=ureAB;gbkey=Gene;gene=ureAB;gene_biotype=protein_coding;gene_synonym=ureAB;locus_tag=SCO5525
NC_003888.3	RefSeq	CDS	6019304	6019987	.	+	0	ID=cds5474;Parent=gene5580;Dbxref=Genbank:NP_629659.1,GeneID:1100965;Name=NP_629659.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureAB;product=bifunctional urease subunit gamma/beta;protein_id=NP_629659.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6019307	6019600	.	+	.	ID=id7210;Dbxref=GeneID:1100965;Note=Pfam match to entry PF00547 urease_gamma%2C Urease%2C gamma subunit%2C score 116.70%2C E-value 7.9e-35;gbkey=misc_feature;gene=ureAB
NC_003888.3	RefSeq	sequence_feature	6019658	6019867	.	+	.	ID=id7211;Dbxref=GeneID:1100965;Note=Pfam match to entry PF00699 Urease_beta%2C Urease beta subunit.%2C score 91.80%2C E-value 1.4e-23;gbkey=misc_feature;gene=ureAB
NC_003888.3	RefSeq	gene	6019984	6021660	.	+	.	ID=gene5581;Dbxref=GeneID:1100966;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=SCO5526
NC_003888.3	RefSeq	CDS	6019984	6021660	.	+	0	ID=cds5475;Parent=gene5581;Dbxref=Genbank:NP_629660.1,GeneID:1100966;Name=NP_629660.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=NP_629660.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6019984	6021657	.	+	.	ID=id7212;Dbxref=GeneID:1100966;Note=Pfam match to entry PF00449 urease%2C Urease%2C score 758.30%2C E-value 3.3e-224;gbkey=misc_feature;gene=ureC
NC_003888.3	RefSeq	sequence_feature	6020362	6020403	.	+	.	ID=id7213;Dbxref=GeneID:1100966;Note=PS01120 Urease nickel ligands signature;gbkey=misc_feature;gene=ureC
NC_003888.3	RefSeq	gene	6021711	6022730	.	+	.	ID=gene5582;Dbxref=GeneID:1100967;Name=SC1C2.08;gbkey=Gene;gene=SC1C2.08;gene_biotype=protein_coding;gene_synonym=SC1C2.08;locus_tag=SCO5527
NC_003888.3	RefSeq	CDS	6021711	6022730	.	+	0	ID=cds5476;Parent=gene5582;Dbxref=Genbank:NP_629661.1,GeneID:1100967;Name=NP_629661.1;Note=SC1C2.08%2C unknown%2C len: 339 aa%3B similar to two hypothetical proteins TR:O41120 (EMBL:U42580) A638R protein from Paramecium bursaria chlorella virus 1 (360 aa)%2C fasta scores%3B opt: 635 z-score: 688.3 E(): 4.4e-31%2C 35.0%25 identity in 343 aa overlapTR:O24890 (EMBL:AE000526) HP0049 from Helicobacter pylori (330 aa)opt: 416 z-score: 316.9 E(): 2.1e-10%2C 25.5%25 identity in 337 aa overlap;gbkey=CDS;gene=SC1C2.08;product=hypothetical protein;protein_id=NP_629661.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6022739	6022742	.	+	.	ID=id7214;Note=possible RBS upstream of SC1C2.09;gbkey=RBS
NC_003888.3	RefSeq	gene	6022748	6023350	.	+	.	ID=gene5583;Dbxref=GeneID:1100968;Name=SC1C2.09;gbkey=Gene;gene=SC1C2.09;gene_biotype=protein_coding;gene_synonym=SC1C2.09;locus_tag=SCO5528
NC_003888.3	RefSeq	CDS	6022748	6023350	.	+	0	ID=cds5477;Parent=gene5583;Dbxref=Genbank:NP_629662.1,GeneID:1100968;Name=NP_629662.1;Note=SC1C2.09%2C possible transcriptional regulator%2C len: 200 aa%3B some similarity to e.g. TR:O34381 (EMBL:Z99112) transcriptional regulator PksA from Bacillus subtilis (205 aa)%2C fasta scores%3B opt: 182 z-score: 206.5 E(): 0.0003%2C 26.5%25 identity in 185 aa overlap. Contains probable helix-turn-helix motif at aa 32-53 (Score 1136%2C +3.06 SD) and Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 35.50%2C E-value 4.1e-08;gbkey=CDS;gene=SC1C2.09;product=transcriptional regulator;protein_id=NP_629662.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6022790	6022930	.	+	.	ID=id7215;Dbxref=GeneID:1100968;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 35.50%2C E-value 4.1e-08;gbkey=misc_feature;gene=SC1C2.09
NC_003888.3	RefSeq	ribosome_entry_site	6023654	6023658	.	+	.	ID=id7216;Note=possible RBS upstream of SC1C2.10;gbkey=RBS
NC_003888.3	RefSeq	gene	6023669	6025273	.	+	.	ID=gene5584;Dbxref=GeneID:1100969;Name=SC1C2.10;gbkey=Gene;gene=SC1C2.10;gene_biotype=protein_coding;gene_synonym=SC1C2.10;locus_tag=SCO5529
NC_003888.3	RefSeq	CDS	6023669	6025273	.	+	0	ID=cds5478;Parent=gene5584;Dbxref=Genbank:NP_629663.1,GeneID:1100969;Name=NP_629663.1;Note=catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA;gbkey=CDS;gene=SC1C2.10;product=(R)-citramalate synthase;protein_id=NP_629663.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6023717	6024565	.	+	.	ID=id7217;Dbxref=GeneID:1100969;Note=Pfam match to entry PF00682 HMGL-like%2C HMGL-like%2C score 126.90%2C E-value 3.7e-34;gbkey=misc_feature;gene=SC1C2.10
NC_003888.3	RefSeq	sequence_feature	6023720	6023770	.	+	.	ID=id7218;Dbxref=GeneID:1100969;Note=PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1;gbkey=misc_feature;gene=SC1C2.10
NC_003888.3	RefSeq	gene	6025338	6026690	.	+	.	ID=gene5585;Dbxref=GeneID:1100970;Name=SC1C2.11;gbkey=Gene;gene=SC1C2.11;gene_biotype=protein_coding;gene_synonym=SC1C2.11;locus_tag=SCO5530
NC_003888.3	RefSeq	CDS	6025338	6026690	.	+	0	ID=cds5479;Parent=gene5585;Dbxref=Genbank:NP_629664.1,GeneID:1100970;Name=NP_629664.1;Note=SC1C2.11%2C membrane protein%2C len: 450 aa%3B contains probable hydrophobic membrane spanning regions and highly Gly-rich C-terminus;gbkey=CDS;gene=SC1C2.11;product=hypothetical protein;protein_id=NP_629664.1;transl_table=11
NC_003888.3	RefSeq	gene	6026708	6027712	.	-	.	ID=gene5586;Dbxref=GeneID:1100971;Name=SC1C2.12c;gbkey=Gene;gene=SC1C2.12c;gene_biotype=protein_coding;gene_synonym=SC1C2.12c;locus_tag=SCO5531
NC_003888.3	RefSeq	CDS	6026708	6027712	.	-	0	ID=cds5480;Parent=gene5586;Dbxref=Genbank:NP_629665.1,GeneID:1100971;Name=NP_629665.1;Note=SC1C2.12c%2C probable integral membrane protein%2C len: 334 aa%3B similar to TR:Q98DR8 (EMBL:AP003004) Rhizobium loti (Mesorhizobium loti) integral membrane protein MLL4580%2C 308 aa%3B fasta scores: opt: 503 Z-score: 515.3 E(): 4.5e-21%3B 33.904%25 identity in 292 aa overlap. COntains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC1C2.12c;product=hypothetical protein;protein_id=NP_629665.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6027798	6027802	.	+	.	ID=id7219;Note=possible RBS upstream of SC1C2.13;gbkey=RBS
NC_003888.3	RefSeq	gene	6027804	6028388	.	+	.	ID=gene5587;Dbxref=GeneID:1100972;Name=SC1C2.13;gbkey=Gene;gene=SC1C2.13;gene_biotype=protein_coding;gene_synonym=SC1C2.13;locus_tag=SCO5532
NC_003888.3	RefSeq	CDS	6027804	6028388	.	+	0	ID=cds5481;Parent=gene5587;Dbxref=Genbank:NP_629666.1,GeneID:1100972;Name=NP_629666.1;Note=SC1C2.13%2C probable transcriptional regulator%2C len: 194 aa%3B simialr to many e.g. S. lividans TR:G3293540 (EMBL:AF072709)  transcriptional regulator (192 aa)%2C fasta scores%3B opt: 342 z-score: 493.9 E(): 2.9e-20%2C 42.0%25 identity in 181 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 30.80%2C E-value 8.3e-07;gbkey=CDS;gene=SC1C2.13;product=transcriptional regulator;protein_id=NP_629666.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6027858	6027998	.	+	.	ID=id7220;Dbxref=GeneID:1100972;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 30.80%2C E-value 8.3e-07;gbkey=misc_feature;gene=SC1C2.13
NC_003888.3	RefSeq	gene	6028474	6029031	.	-	.	ID=gene5588;Dbxref=GeneID:1100973;Name=SC1C2.14c;gbkey=Gene;gene=SC1C2.14c;gene_biotype=protein_coding;gene_synonym=SC1C2.14c;locus_tag=SCO5533
NC_003888.3	RefSeq	CDS	6028474	6029031	.	-	0	ID=cds5482;Parent=gene5588;Dbxref=Genbank:NP_629667.1,GeneID:1100973;Name=NP_629667.1;Note=SC1C2.14c%2C unknown%2C len: 185 aa%3B similar to hypothetical proteins from E. coli YCEI_ECOLI (191 aa)%2C fasta scores%3B opt: 373 z-score: 567.7 E(): 2.3e-24%2C 34.1%25 identity in 179 aa overlap and H. pylori TR:O25873 (EMBL:AE000633) HP1286 (182 aa)%2C fasta scores%3B opt: 279 z-score: 242.2 E(): 3.1e-06%2C 27.9%25 identity in 172 aa overlap;gbkey=CDS;gene=SC1C2.14c;product=hypothetical protein;protein_id=NP_629667.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6029037	6029041	.	-	.	ID=id7221;Note=possible RBS upstream of SC1C2.14c;gbkey=RBS
NC_003888.3	RefSeq	gene	6029180	6031510	.	+	.	ID=gene5589;Dbxref=GeneID:1100974;Name=SC1C2.15;gbkey=Gene;gene=SC1C2.15;gene_biotype=protein_coding;gene_synonym=SC1C2.15;locus_tag=SCO5534
NC_003888.3	RefSeq	CDS	6029180	6031510	.	+	0	ID=cds5483;Parent=gene5589;Dbxref=Genbank:NP_629668.1,GeneID:1100974;Name=NP_629668.1;Note=SC1C2.15%2C possible  lyase%2C len: 776 aa%3B similar to hyaluronidase from several organisms e.g. Propionibacterium acnes TR:Q59634 (EMBL:U15927) hyaluronidase (EC 4.2.2.1) (hyaluronate lyase) (752 aa)%2C fasta scores%3B opt: 407 z-score: 783.6 E(): 0%2C 31.5%25 identity in 781 aa overlap. Contains N-tertminal signal sequence;gbkey=CDS;gene=SC1C2.15;product=lyase;protein_id=NP_629668.1;transl_table=11
NC_003888.3	RefSeq	gene	6031665	6033248	.	+	.	ID=gene5590;Dbxref=GeneID:1100975;Name=SC1C2.16;gbkey=Gene;gene=SC1C2.16;gene_biotype=protein_coding;gene_synonym=SC1C2.16;locus_tag=SCO5535
NC_003888.3	RefSeq	CDS	6031665	6033248	.	+	0	ID=cds5484;Parent=gene5590;Dbxref=Genbank:NP_629669.1,GeneID:1100975;Name=NP_629669.1;Note=SC1C2.16%2C probable carboxyl transferase%2C len: 527 aa%3B similar to many e.g. Veillonella parvula TR:Q57079 (EMBL:Z24754) alpha-subunit%2C methylmalonyl-coa decarboxylase (509 aa)%2C fasta scores%3B opt: 1929 z-score: 2387.4 E(): 0%2C 55.9%25 identity in 510 aa overlap and Myxococcus xanthus TR:O24789 (EMBL:AB007000) propionyl-coa carboxylase (524 aa)%2C fasta scores%3B opt: 1922 z-score: 2359.6 E(): 0%2C 55.7%25 identity in 528 aa overlap;gbkey=CDS;gene=SC1C2.16;product=carboxyl transferase;protein_id=NP_629669.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6033253	6033257	.	+	.	ID=id7222;Note=possible RBS upstream of SC1C2.17;gbkey=RBS
NC_003888.3	RefSeq	gene	6033266	6033463	.	+	.	ID=gene5591;Dbxref=GeneID:1100976;Name=SC1C2.17;gbkey=Gene;gene=SC1C2.17;gene_biotype=protein_coding;gene_synonym=SC1C2.17;locus_tag=SCO5536
NC_003888.3	RefSeq	CDS	6033266	6033463	.	+	0	ID=cds5485;Parent=gene5591;Dbxref=Genbank:NP_629670.1,GeneID:1100976;Name=NP_629670.1;Note=SC1C2.17%2C unknown%2C len: 65 aa;gbkey=CDS;gene=SC1C2.17;product=hypothetical protein;protein_id=NP_629670.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6033472	6033509	.	+	.	ID=id7223;Note=hairpin_loop with 17bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6033766	6034290	.	-	.	ID=gene5592;Dbxref=GeneID:1100977;Name=cvnD2;gbkey=Gene;gene=cvnD2;gene_biotype=protein_coding;gene_synonym=cvnD2,SC1C2.18c;locus_tag=SCO5537
NC_003888.3	RefSeq	CDS	6033766	6034290	.	-	0	ID=cds5486;Parent=gene5592;Dbxref=Genbank:NP_629671.1,GeneID:1100977;Name=NP_629671.1;Note=SC1C2.18c%2C cvnD2%2C probable ATP/GTP binding protein%2C len: 174 aa%3B similar to prokaryotic hypothetical proteins e.g. M. tuberculosis TR:O50391 (EMBL:AL009198) MTV004.19C (193 aa)%2C fasta scores%3B opt: 756 z-score: 1186.3 E(): 0%2C 67.4%25 identity in 175 aa overlap%2C and more distantly to the yeast GTP-binding protein SEC4_YEAST RAS-related protein SEC4 (215 aa)%2C fasta scores%3B opt: 113 z-score: 244.1 E(): 2.4e-06%2C 24.6%25 identity in 191 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop). 97.1%25 identical to upstream gene SC1C2.22c;gbkey=CDS;gene=cvnD2;product=ATP/GTP binding protein;protein_id=NP_629671.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6034258	6034281	.	-	.	ID=id7224;Dbxref=GeneID:1100977;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD2
NC_003888.3	RefSeq	gene	6034328	6034900	.	-	.	ID=gene5593;Dbxref=GeneID:1100978;Name=cvnC2;gbkey=Gene;gene=cvnC2;gene_biotype=protein_coding;gene_synonym=cvnC2,SC1C2.19c;locus_tag=SCO5538
NC_003888.3	RefSeq	CDS	6034328	6034900	.	-	0	ID=cds5487;Parent=gene5593;Dbxref=Genbank:NP_629672.1,GeneID:1100978;Name=NP_629672.1;Note=SC1C2.19c%2C cvnC2%2C unknown%2C len: 190 aa%3B N-terminus is Pro-rich%2C C-terminus has similarity to M. tuberculosis hypothetical protein TR:O50392 (EMBL:AL009198) MTV004.20C (122 aa)%2C fasta scores%3B opt: 231 z-score: 217.7 E(): 7.1e-05%2C 41.0%25 identity in 122 aa overlap. C-terminus is 84.7%25 identical to upstream gene SC3A9.23c;gbkey=CDS;gene=cvnC2;product=hypothetical protein;protein_id=NP_629672.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6034906	6034911	.	-	.	ID=id7225;Note=possible RBS upstream of SC1C2.19c;gbkey=RBS
NC_003888.3	RefSeq	gene	6034995	6035417	.	-	.	ID=gene5594;Dbxref=GeneID:1100979;Name=cvnB2;gbkey=Gene;gene=cvnB2;gene_biotype=protein_coding;gene_synonym=cvnB2,SC1C2.20c;locus_tag=SCO5539
NC_003888.3	RefSeq	CDS	6034995	6035417	.	-	0	ID=cds5488;Parent=gene5594;Dbxref=Genbank:NP_629673.1,GeneID:1100979;Name=NP_629673.1;Note=SC1C2.20c%2C cvnB2%2C unknown%2C len: 140 aa%3B similar to M. tuberculosis hypothetical protein TR:O50393 (EMBL:AL009198) MTV004.21c (130 aa)%2C fasta scores%3B opt: 445 z-score: 754.7 E(): 0%2C 56.9%25 identity in 116 aa overlap. 94.2%25 identical to upstream gene SC1C2.24c;gbkey=CDS;gene=cvnB2;product=hypothetical protein;protein_id=NP_629673.1;transl_table=11
NC_003888.3	RefSeq	gene	6035419	6038754	.	-	.	ID=gene5595;Dbxref=GeneID:1100980;Name=cvnA2;gbkey=Gene;gene=cvnA2;gene_biotype=protein_coding;gene_synonym=cvnA2,SC1C2.21c;locus_tag=SCO5540
NC_003888.3	RefSeq	CDS	6035419	6038754	.	-	0	ID=cds5489;Parent=gene5595;Dbxref=Genbank:NP_629674.1,GeneID:1100980;Name=NP_629674.1;Note=SC1C2.21c%2C cvnA2%2C unknown%2C len: 1111 aa%3B contains two possible transmembrane domains at around 100 and 400 aa%2C a Gln-rich region at around 850 aa and a probable coiled-coil domain from 297 to 327. Overall 35.6%25 identical to upstream gene SC1C2.25c%2C but with much higher similarity between aa 477 and 719;gbkey=CDS;gene=cvnA2;product=hypothetical protein;protein_id=NP_629674.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6035425	6035429	.	-	.	ID=id7226;Dbxref=GeneID:1100980;Note=possible RBS upstream of SC1C2.20c;gbkey=RBS;gene=cvnA2
NC_003888.3	RefSeq	gene	6039089	6039613	.	-	.	ID=gene5596;Dbxref=GeneID:1100981;Name=cvnD1;gbkey=Gene;gene=cvnD1;gene_biotype=protein_coding;gene_synonym=cvnD1,SC1C2.22c;locus_tag=SCO5541
NC_003888.3	RefSeq	CDS	6039089	6039613	.	-	0	ID=cds5490;Parent=gene5596;Dbxref=Genbank:NP_629675.1,GeneID:1100981;Name=NP_629675.1;Note=SC1C2.22c%2C cvnD1%2C probable ATP /GTP binding protein%2C len: 174 aa%3B similar to prokaryotic hypothetical proteins e.g. M. tuberculosis TR:O50391 (EMBL:AL009198) MTV004.19C (193 aa)%2C fasta scores%3B opt: 718 z-score: 1252.2 E(): 0%2C 64.9%25 identity in 168 aa overlap%2C and more distantly to the yeast GTP-binding protein SEC4_YEAST RAS-related protein SEC4 (215 aa)%2C fasta scores%3B opt: 111 z-score: 192.5 E(): 0.0018%2C 25.0%25 identity in 128 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop). 97.1%25 identitical to downstream gene SC1C2.18c;gbkey=CDS;gene=cvnD1;product=ATP-GTP binding protein;protein_id=NP_629675.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6039581	6039604	.	-	.	ID=id7227;Dbxref=GeneID:1100981;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD1
NC_003888.3	RefSeq	gene	6039645	6040043	.	-	.	ID=gene5597;Dbxref=GeneID:1100982;Name=cvnC1;gbkey=Gene;gene=cvnC1;gene_biotype=protein_coding;gene_synonym=cvnC1,SC1C2.23c;locus_tag=SCO5542
NC_003888.3	RefSeq	CDS	6039645	6040043	.	-	0	ID=cds5491;Parent=gene5597;Dbxref=Genbank:NP_629676.1,GeneID:1100982;Name=NP_629676.1;Note=SC1C2.23c%2C cvnC1%2C unknown%2C len: 132 aa%3B similar to M. tuberculosis hypothetical protein TR:O50392 (EMBL:AL009198) MTV004.20C (122 aa)%2C fasta scores%3B opt: 236 z-score: 328.3 E(): 4.9e-11%2C 38.5%25 identity in 122 aa overlap. C-terminus is 84.7%25 identical to downstream gene SC1C2.19c;gbkey=CDS;gene=cvnC1;product=hypothetical protein;protein_id=NP_629676.1;transl_table=11
NC_003888.3	RefSeq	gene	6040155	6040568	.	-	.	ID=gene5598;Dbxref=GeneID:1100983;Name=cvnB1;gbkey=Gene;gene=cvnB1;gene_biotype=protein_coding;gene_synonym=cvnB1,SC1C2.24c;locus_tag=SCO5543
NC_003888.3	RefSeq	CDS	6040155	6040568	.	-	0	ID=cds5492;Parent=gene5598;Dbxref=Genbank:NP_629677.1,GeneID:1100983;Name=NP_629677.1;Note=SC1C2.24c%2C cvnB1%2C unknown%2C len: 137 aa%3B M. tuberculosis hypothetical protein TR:O50393 (EMBL:AL009198) MTV004.21c (130 aa)%2C fasta scores%3B opt: 466 z-score: 804.8 E(): 0%2C 58.6%25 identity in 116 aa overlap. 94.2%25 identical to downstream gene SC1C2.20c;gbkey=CDS;gene=cvnB1;product=hypothetical protein;protein_id=NP_629677.1;transl_table=11
NC_003888.3	RefSeq	gene	6040578	6044567	.	-	.	ID=gene5599;Dbxref=GeneID:1100984;Name=cvnA1;gbkey=Gene;gene=cvnA1;gene_biotype=protein_coding;gene_synonym=cvnA1,SC1C2.25c;locus_tag=SCO5544
NC_003888.3	RefSeq	CDS	6040578	6044567	.	-	0	ID=cds5493;Parent=gene5599;Dbxref=Genbank:NP_629678.1,GeneID:1100984;Name=NP_629678.1;Note=SC1C2.25c%2C cvnA1%2C unknown%2C len: 1329 aa%3B contains two possible transmembrane domains at around 100 and 400 aa%2C and probable coiled-coil domains from 112 to 144 and 360 to 398. Overall 35.6%25 identical to downstream gene SC1C2.22c%2C but with much higher similarity between aa 468 and 709;gbkey=CDS;gene=cvnA1;product=hypothetical protein;protein_id=NP_629678.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6044579	6044582	.	-	.	ID=id7228;Note=possible RBS upstream of SC1C2.25c;gbkey=RBS
NC_003888.3	RefSeq	gene	6045182	6045358	.	+	.	ID=gene5600;Dbxref=GeneID:1100985;Name=SC1C2.26;gbkey=Gene;gene=SC1C2.26;gene_biotype=protein_coding;gene_synonym=SC1C2.26;locus_tag=SCO5545
NC_003888.3	RefSeq	CDS	6045182	6045358	.	+	0	ID=cds5494;Parent=gene5600;Dbxref=Genbank:NP_629679.1,GeneID:1100985;Name=NP_629679.1;Note=SC1C2.26%2C unknown%2C len: 58 aa;gbkey=CDS;gene=SC1C2.26;product=hypothetical protein;protein_id=NP_629679.1;transl_table=11
NC_003888.3	RefSeq	gene	6045485	6046270	.	+	.	ID=gene5601;Dbxref=GeneID:1100986;Name=SC1C2.27;gbkey=Gene;gene=SC1C2.27;gene_biotype=protein_coding;gene_synonym=SC1C2.27;locus_tag=SCO5546
NC_003888.3	RefSeq	CDS	6045485	6046270	.	+	0	ID=cds5495;Parent=gene5601;Dbxref=Genbank:NP_629680.1,GeneID:1100986;Name=NP_629680.1;Note=SC1C2.27%2C unknown%2C len: 261 aa%3B similar to hypothetical proteins e.g. E. coli TR:P76004 (EMBL:AE000216) O219 (219 aa)%2C fasta scores%3B opt: 555 z-score: 764.8 E(): 0%2C 45.7%25 identity in 208 aa overlap and to e.g. HPCE_ECOLI 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (405 aa)%2C fasta scores%3B opt: 389 z-score: 507.2 E(): 5.3e-21%2C 33.9%25 identity in 218 aa overlap;gbkey=CDS;gene=SC1C2.27;product=hypothetical protein;protein_id=NP_629680.1;transl_table=11
NC_003888.3	RefSeq	gene	6046263	6047747	.	+	.	ID=gene5602;Dbxref=GeneID:1100987;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=SCO5547
NC_003888.3	RefSeq	CDS	6046263	6047747	.	+	0	ID=cds5496;Parent=gene5602;Dbxref=Genbank:NP_629681.1,GeneID:1100987;Name=NP_629681.1;Note=Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation;gbkey=CDS;gene=gltX;product=glutamyl-tRNA synthetase;protein_id=NP_629681.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6046284	6047729	.	+	.	ID=id7229;Dbxref=GeneID:1100987;Note=Pfam match to entry PF00749 tRNA-synt_1c%2C tRNA synthetases class I (E and Q)%2C score 470.50%2C E-value 1.3e-137;gbkey=misc_feature;gene=gltX
NC_003888.3	RefSeq	gene	6047855	6048250	.	+	.	ID=gene5603;Dbxref=GeneID:1100988;Name=SC1C2.29;gbkey=Gene;gene=SC1C2.29;gene_biotype=protein_coding;gene_synonym=SC1C2.29;locus_tag=SCO5548
NC_003888.3	RefSeq	CDS	6047855	6048250	.	+	0	ID=cds5497;Parent=gene5603;Dbxref=Genbank:NP_629682.1,GeneID:1100988;Name=NP_629682.1;Note=SC1C2.29%2C unknown%2C len: 131 aa%3B similar to M. tuberculosis hypothetical protein TR:O07205 (EMBL:Z96072) MTCY05A6.25 (142 aa)%2C fasta scores%3B opt: 149 z-score: 314.1 E(): 3e-10%2C 34.7%25 identity in 121 aa overlap;gbkey=CDS;gene=SC1C2.29;product=hypothetical protein;protein_id=NP_629682.1;transl_table=11
NC_003888.3	RefSeq	gene	6048321	6049055	.	+	.	ID=gene5604;Dbxref=GeneID:1100989;Name=SC1C2.30;gbkey=Gene;gene=SC1C2.30;gene_biotype=protein_coding;gene_synonym=SC1C2.30;locus_tag=SCO5549
NC_003888.3	RefSeq	CDS	6048321	6049055	.	+	0	ID=cds5498;Parent=gene5604;Dbxref=Genbank:NP_629683.1,GeneID:1100989;Name=NP_629683.1;Note=SC1C2.30%2C probable hydrolase%2C len: 244 aa%3B similar to hypothetical proteins from many organisms and to HAD1_PSESP 2-haloalkanoic acid dehalogenase I (EC 3.8. (227 aa)%2C fasta scores%3B opt: 201 z-score: 261.1 E(): 2.7e-07%2C 30.4%25 identity in 237 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 43.50%2C E-value 4.8e-09;gbkey=CDS;gene=SC1C2.30;product=hydrolase;protein_id=NP_629683.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6048327	6048938	.	+	.	ID=id7230;Dbxref=GeneID:1100989;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 43.50%2C E-value 4.8e-09;gbkey=misc_feature;gene=SC1C2.30
NC_003888.3	RefSeq	gene	6049148	6049219	.	+	.	ID=gene5605;Dbxref=GeneID:3240059;Name=SCOt56;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt56
NC_003888.3	RefSeq	tRNA	6049148	6049219	.	+	.	ID=rna73;Parent=gene5605;Dbxref=GeneID:3240059;Note=tRNA Gln anticodon CTG%2C Cove score 58.49;gbkey=tRNA;product=tRNA-Gln
NC_003888.3	RefSeq	exon	6049148	6049219	.	+	.	ID=id7231;Parent=rna73;Dbxref=GeneID:3240059;Note=tRNA Gln anticodon CTG%2C Cove score 58.49;gbkey=tRNA;product=tRNA-Gln
NC_003888.3	RefSeq	gene	6049259	6049331	.	+	.	ID=gene5606;Dbxref=GeneID:3240060;Name=SCOt57;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt57
NC_003888.3	RefSeq	tRNA	6049259	6049331	.	+	.	ID=rna74;Parent=gene5606;Dbxref=GeneID:3240060;Note=tRNA Glu anticodon CTC%2C Cove score 63.89;gbkey=tRNA;product=tRNA-Glu
NC_003888.3	RefSeq	exon	6049259	6049331	.	+	.	ID=id7232;Parent=rna74;Dbxref=GeneID:3240060;Note=tRNA Glu anticodon CTC%2C Cove score 63.89;gbkey=tRNA;product=tRNA-Glu
NC_003888.3	RefSeq	gene	6049394	6049469	.	+	.	ID=gene5607;Dbxref=GeneID:3240061;Name=SCOt58;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt58
NC_003888.3	RefSeq	tRNA	6049394	6049469	.	+	.	ID=rna75;Parent=gene5607;Dbxref=GeneID:3240061;Note=tRNA Glu anticodon CTC%2C Cove score 64.51;gbkey=tRNA;product=tRNA-Glu
NC_003888.3	RefSeq	exon	6049394	6049469	.	+	.	ID=id7233;Parent=rna75;Dbxref=GeneID:3240061;Note=tRNA Glu anticodon CTC%2C Cove score 64.51;gbkey=tRNA;product=tRNA-Glu
NC_003888.3	RefSeq	gene	6049487	6049558	.	+	.	ID=gene5608;Dbxref=GeneID:3240062;Name=SCOt59;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt59
NC_003888.3	RefSeq	tRNA	6049487	6049558	.	+	.	ID=rna76;Parent=gene5608;Dbxref=GeneID:3240062;Note=tRNA Gln anticodon CTG%2C Cove score 57.02;gbkey=tRNA;product=tRNA-Gln
NC_003888.3	RefSeq	exon	6049487	6049558	.	+	.	ID=id7234;Parent=rna76;Dbxref=GeneID:3240062;Note=tRNA Gln anticodon CTG%2C Cove score 57.02;gbkey=tRNA;product=tRNA-Gln
NC_003888.3	RefSeq	gene	6049603	6049675	.	+	.	ID=gene5609;Dbxref=GeneID:3240063;Name=SCOt60;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt60
NC_003888.3	RefSeq	tRNA	6049603	6049675	.	+	.	ID=rna77;Parent=gene5609;Dbxref=GeneID:3240063;Note=tRNA Glu anticodon CTC%2C Cove score 63.89;gbkey=tRNA;product=tRNA-Glu
NC_003888.3	RefSeq	exon	6049603	6049675	.	+	.	ID=id7235;Parent=rna77;Dbxref=GeneID:3240063;Note=tRNA Glu anticodon CTC%2C Cove score 63.89;gbkey=tRNA;product=tRNA-Glu
NC_003888.3	RefSeq	gene	6049735	6050379	.	-	.	ID=gene5610;Dbxref=GeneID:1100990;Name=SC1C2.31c;gbkey=Gene;gene=SC1C2.31c;gene_biotype=protein_coding;gene_synonym=SC1C2.31c;locus_tag=SCO5550
NC_003888.3	RefSeq	CDS	6049735	6050379	.	-	0	ID=cds5499;Parent=gene5610;Dbxref=Genbank:NP_629684.1,GeneID:1100990;Name=NP_629684.1;Note=SC1C2.31c%2C probable transcriptional regulator%2C len: 214 aa%3B N-terminus is similar to the N-terminus of members of the MerR family%2C e.g. MERR_THIFE mercuric resistance operon regulatory protein (122 aa)%2C fasta scores%3B opt: 111 z-score: 189.7 E(): 0.0026%2C 30.3%25 identity in 66 aa overlap. Contains probable helix-turn-helix motif at aa 2-23 (1799%2C +5.31 SD);gbkey=CDS;gene=SC1C2.31c;product=transcriptional regulator;protein_id=NP_629684.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6050393	6050396	.	-	.	ID=id7236;Note=possible RBS upstream of SC1C2.31c;gbkey=RBS
NC_003888.3	RefSeq	gene	6050461	6051033	.	+	.	ID=gene5611;Dbxref=GeneID:1100991;Name=SC1C2.32;gbkey=Gene;gene=SC1C2.32;gene_biotype=protein_coding;gene_synonym=SC1C2.32;locus_tag=SCO5551
NC_003888.3	RefSeq	CDS	6050461	6051033	.	+	0	ID=cds5500;Parent=gene5611;Dbxref=Genbank:NP_629685.1,GeneID:1100991;Name=NP_629685.1;Note=SC1C2.32%2C unknown%2C len: 190 aa;gbkey=CDS;gene=SC1C2.32;product=hypothetical protein;protein_id=NP_629685.1;transl_table=11
NC_003888.3	RefSeq	gene	6051099	6051815	.	-	.	ID=gene5612;Dbxref=GeneID:1100992;Name=SC1C2.33c;gbkey=Gene;gene=SC1C2.33c;gene_biotype=protein_coding;gene_synonym=SC1C2.33c;locus_tag=SCO5552
NC_003888.3	RefSeq	CDS	6051099	6051815	.	-	0	ID=cds5501;Parent=gene5612;Dbxref=Genbank:NP_629686.1,GeneID:1100992;Name=NP_629686.1;Note=SC1C2.33c%2C probable regulator%2C len: 238 aa%3B similar to many e.g. GYLR_STRGR glycerol operon regulatory protein (254 aa)%2C fasta scores%3B opt: 146 z-score: 237.0 E(): 5.9e-06%2C 28.9%25 identity in 246 aa overlap;gbkey=CDS;gene=SC1C2.33c;product=regulator;protein_id=NP_629686.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6051825	6051828	.	-	.	ID=id7237;Note=possible RBS upstream of SC1C2.33c;gbkey=RBS
NC_003888.3	RefSeq	gene	6052013	6053443	.	+	.	ID=gene5613;Dbxref=GeneID:1100993;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;gene_synonym=leuC;locus_tag=SCO5553
NC_003888.3	RefSeq	CDS	6052013	6053443	.	+	0	ID=cds5502;Parent=gene5613;Dbxref=Genbank:NP_629687.1,GeneID:1100993;Name=NP_629687.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;gene=leuC;product=3-isopropylmalate dehydratase large subunit;protein_id=NP_629687.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6052022	6053383	.	+	.	ID=id7238;Dbxref=GeneID:1100993;Note=Pfam match to entry PF00330 aconitase%2C Aconitase family (aconitate hydratase)%2C score 760.00%2C E-value 6.9e-232;gbkey=misc_feature;gene=leuC
NC_003888.3	RefSeq	sequence_feature	6053027	6053077	.	+	.	ID=id7239;Dbxref=GeneID:1100993;Note=PS00450 Aconitase family signature 1;gbkey=misc_feature;gene=leuC
NC_003888.3	RefSeq	sequence_feature	6053207	6053248	.	+	.	ID=id7240;Dbxref=GeneID:1100993;Note=PS01244 Aconitase family signature 2;gbkey=misc_feature;gene=leuC
NC_003888.3	RefSeq	gene	6053449	6054042	.	+	.	ID=gene5614;Dbxref=GeneID:1100994;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=SCO5554
NC_003888.3	RefSeq	CDS	6053449	6054042	.	+	0	ID=cds5503;Parent=gene5614;Dbxref=Genbank:NP_629688.1,GeneID:1100994;Name=NP_629688.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=NP_629688.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6053449	6053934	.	+	.	ID=id7241;Dbxref=GeneID:1100994;Note=Pfam match to entry PF00694 Aconitase_C%2C Aconitase C-terminal domain%2C score 149.00%2C E-value 8.4e-41;gbkey=misc_feature;gene=leuD
NC_003888.3	RefSeq	stem_loop	6054109	6054143	.	+	.	ID=id7242;Note=hairpin_loop with 17bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6054328	6054558	.	+	.	ID=gene5615;Dbxref=GeneID:1100995;Name=SC1C2.36;gbkey=Gene;gene=SC1C2.36;gene_biotype=protein_coding;gene_synonym=SC1C2.36;locus_tag=SCO5555
NC_003888.3	RefSeq	CDS	6054328	6054558	.	+	0	ID=cds5504;Parent=gene5615;Dbxref=Genbank:NP_629689.1,GeneID:1100995;Name=NP_629689.1;Note=SC1C2.36%2C unknown%2C len: 76 aa;gbkey=CDS;gene=SC1C2.36;product=hypothetical protein;protein_id=NP_629689.1;transl_table=11
NC_003888.3	RefSeq	gene	6054696	6055352	.	+	.	ID=gene5616;Dbxref=GeneID:1100996;Name=SC1C2.37;gbkey=Gene;gene=SC1C2.37;gene_biotype=protein_coding;gene_synonym=SC1C2.37;locus_tag=SCO5556
NC_003888.3	RefSeq	CDS	6054696	6055352	.	+	0	ID=cds5505;Parent=gene5616;Dbxref=Genbank:NP_629690.1,GeneID:1100996;Name=NP_629690.1;Note=SC1C2.37%2C histone-like DNA binding protein%2C len: 218 aa%3B N-terminus is highly simialar to many bacterial HU proteins e.g. DBHB_ECOLI DNA-binding protein HU-beta (NS1) (HU-1) (90 aa)%2C fasta scores%3B opt: 230 z-score: 300.3 E(): 1.8e-09%2C 40.0%25 identity in 90 aa overlap%2C and contains PS00045 Bacterial histone-like DNA-binding proteins signature and Pfam match to entry PF00216 Bac_DNA_binding%2C Bacterial DNA-binding proteins%2C score 104.40%2C E-value 9.2e-29. C-terminus contains 18 degenerate repeats of an (A /T)(3-5)KK motif. A similar C-terminal extension is also present in the M. tuberculosis homologue TR:P95109 (EMBL:Z83018) dna-binding protein MTCY349.01 (214 aa)%2C fasta scores%3B opt: 563 z-score: 543.5 E(): 5e-23%2C 50.9%25 identity in 220 aa overlap%2C and to a lesser extent in the M. leprae homologue. The repeats are simlar to those in hrdB (SC5B8.10%2C 45.4%25 identity in 97 aa overlap);gbkey=CDS;gene=SC1C2.37;product=histone-like DNA binding protein;protein_id=NP_629690.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6054696	6054962	.	+	.	ID=id7243;Dbxref=GeneID:1100996;Note=Pfam match to entry PF00216 Bac_DNA_binding%2C Bacterial DNA-binding proteins%2C score 104.40%2C E-value 9.2e-29;gbkey=misc_feature;gene=SC1C2.37
NC_003888.3	RefSeq	sequence_feature	6054828	6054887	.	+	.	ID=id7244;Dbxref=GeneID:1100996;Note=PS00045 Bacterial histone-like DNA-binding proteins signature;gbkey=misc_feature;gene=SC1C2.37
NC_003888.3	RefSeq	repeat_region	6055047	6055347	.	+	.	ID=id7245;Dbxref=GeneID:1100996;Note=degenerate 15bp repeats;gbkey=repeat_region;gene=SC1C2.37
NC_003888.3	RefSeq	gene	6055467	6055700	.	-	.	ID=gene5617;Dbxref=GeneID:1100997;Name=SC1C2.38c;gbkey=Gene;gene=SC1C2.38c;gene_biotype=protein_coding;gene_synonym=SC1C2.38c;locus_tag=SCO5557
NC_003888.3	RefSeq	CDS	6055467	6055700	.	-	0	ID=cds5506;Parent=gene5617;Dbxref=Genbank:NP_629691.1,GeneID:1100997;Name=NP_629691.1;Note=SC1C2.38c%2C unknown%2C len: 77 aa;gbkey=CDS;gene=SC1C2.38c;product=hypothetical protein;protein_id=NP_629691.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6055614	6055725	.	+	.	ID=id7246;Note=Overlap with Streptomyces coelicolor cosmid 1C2 (EMBL:AL031124).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6055710	6056348	.	-	.	ID=gene5618;Dbxref=GeneID:1100998;Name=SC7A1.01c;gbkey=Gene;gene=SC7A1.01c;gene_biotype=protein_coding;gene_synonym=SC7A1.01c;locus_tag=SCO5557a
NC_003888.3	RefSeq	CDS	6055710	6056348	.	-	0	ID=cds5507;Parent=gene5618;Dbxref=Genbank:NP_629692.1,GeneID:1100998;Name=NP_629692.1;Note=SC7A1.01c%2C unknown%2C len: 212 aa%3B similar to TR:P95112 (EMBL:Z83018) hypothetical protein from Mycobacterium tuberculosis (214 aa) fasta scores%3B opt: 420%2C z-score: 422.3%2C E(): 3.1e-16%2C (43.5%25 identity in 207 aa overlap) and TR:O33128 (EMBL:Z99263) hypothetical protein from Mycobacterium leprae (216 aa) fasta scores%3B opt: 386%2C z-score: 414.0%2C E(): 9.1e-16%2C (40.6%25 identity in 207 aa overlap).;gbkey=CDS;gene=SC7A1.01c;product=hypothetical protein;protein_id=NP_629692.1;transl_table=11
NC_003888.3	RefSeq	gene	6056492	6057286	.	+	.	ID=gene5619;Dbxref=GeneID:1100999;Name=SC7A1.02;gbkey=Gene;gene=SC7A1.02;gene_biotype=protein_coding;gene_synonym=SC7A1.02;locus_tag=SCO5558
NC_003888.3	RefSeq	CDS	6056492	6057286	.	+	0	ID=cds5508;Parent=gene5619;Dbxref=Genbank:NP_629693.1,GeneID:1100999;Name=NP_629693.1;Note=SC7A1.02%2C possible acyltransferase%2C len: 264aa%3B similar to several proposed acyltransferases eg. TR:O07809 (EMBL:Z97188) acyltransferase from Mycobacterium tuberculosis (251 aa) fasta scores%3B opt: 266%2C z-score: 384.5%2C E(): 4e-14%2C (29.7%25 identity in 229 aa overlap).;gbkey=CDS;gene=SC7A1.02;product=acyltransferase;protein_id=NP_629693.1;transl_table=11
NC_003888.3	RefSeq	gene	6057283	6058293	.	+	.	ID=gene5620;Dbxref=GeneID:1101000;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;gene_synonym=SC7A1.03;locus_tag=SCO5559
NC_003888.3	RefSeq	CDS	6057283	6058293	.	+	0	ID=cds5509;Parent=gene5620;Dbxref=Genbank:NP_629694.1,GeneID:1101000;Name=NP_629694.1;Note=catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;gbkey=CDS;gene=gpsA;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=NP_629694.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6057283	6058260	.	+	.	ID=id7247;Dbxref=GeneID:1101000;Note=Pfam match to entry PF01210 NAD_Gly3P_dh%2C NAD-dependent glycerol-3-phosphate dehydrogenase %2C score 295.10%2C E-value 8.8e-85;gbkey=misc_feature;gene=gpsA
NC_003888.3	RefSeq	sequence_feature	6058213	6058236	.	+	.	ID=id7248;Dbxref=GeneID:1101000;Note=PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=gpsA
NC_003888.3	RefSeq	gene	6058385	6059554	.	+	.	ID=gene5621;Dbxref=GeneID:1101001;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;gene_synonym=SC7A1.04;locus_tag=SCO5560
NC_003888.3	RefSeq	CDS	6058385	6059554	.	+	0	ID=cds5510;Parent=gene5621;Dbxref=Genbank:NP_629695.1,GeneID:1101001;Name=NP_629695.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanyl-alanine synthetase A;protein_id=NP_629695.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6058775	6058810	.	+	.	ID=id7249;Dbxref=GeneID:1101001;Note=PS00843 D-alanine-D-alanine ligase signature 1.;gbkey=misc_feature;gene=ddl
NC_003888.3	RefSeq	gene	6059732	6059965	.	-	.	ID=gene5622;Dbxref=GeneID:1101002;Name=SC7A1.05c;gbkey=Gene;gene=SC7A1.05c;gene_biotype=protein_coding;gene_synonym=SC7A1.05c;locus_tag=SCO5561
NC_003888.3	RefSeq	CDS	6059732	6059965	.	-	0	ID=cds5511;Parent=gene5622;Dbxref=Genbank:NP_629696.1,GeneID:1101002;Name=NP_629696.1;Note=SC7A1.05c%2C conserved hypothetical protein%2C len: 77 aa%3B similar to several /hypotheticals eg. TR:O28868 (EMBL:AE001007) proposed transcriptional regulatory protein from Archaeoglobus fulgidus (77 aa) fasta scores%3B opt: 123%2C z-score: 217.3%2C E(): 8.3e-05%2C (31.9%25 identity in 69 aa overlap).;gbkey=CDS;gene=SC7A1.05c;product=hypothetical protein;protein_id=NP_629696.1;transl_table=11
NC_003888.3	RefSeq	gene	6060199	6061167	.	+	.	ID=gene5623;Dbxref=GeneID:1101003;Name=SC7A1.06;gbkey=Gene;gene=SC7A1.06;gene_biotype=protein_coding;gene_synonym=SC7A1.06;locus_tag=SCO5562
NC_003888.3	RefSeq	CDS	6060199	6061167	.	+	0	ID=cds5512;Parent=gene5623;Dbxref=Genbank:NP_629697.1,GeneID:1101003;Name=NP_629697.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;gene=SC7A1.06;product=thiamine monophosphate kinase;protein_id=NP_629697.1;transl_table=11
NC_003888.3	RefSeq	gene	6061164	6061973	.	+	.	ID=gene5624;Dbxref=GeneID:1101004;Name=SC7A1.07;gbkey=Gene;gene=SC7A1.07;gene_biotype=protein_coding;gene_synonym=SC7A1.07;locus_tag=SCO5563
NC_003888.3	RefSeq	CDS	6061164	6061973	.	+	0	ID=cds5513;Parent=gene5624;Dbxref=Genbank:NP_629698.1,GeneID:1101004;Name=NP_629698.1;Note=SC7A1.07%2C thiD%2C phosphomethylpyrimidine kinase %2C len: 269aa%3B similar to many eg. SW:THID_SALTY ThiD%2C phosphomethylpyrimidine kinase from Salmonella typhimurium (266 aa) fasta scores%3B opt: 588%2C z-score: 737.2%2C E(): 0%2C (42.1%25 identity in 259 aa overlap). Note: thiAB (arbitrarily named) previously mapped to this region of the chromosome.;gbkey=CDS;gene=SC7A1.07;product=phosphomethylpyrimidine kinase;protein_id=NP_629698.1;transl_table=11
NC_003888.3	RefSeq	gene	6062059	6062244	.	-	.	ID=gene5625;Dbxref=GeneID:1101005;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;gene_synonym=SC7A1.08c;locus_tag=SCO5564
NC_003888.3	RefSeq	CDS	6062059	6062244	.	-	0	ID=cds5514;Parent=gene5625;Dbxref=Genbank:NP_629699.1,GeneID:1101005;Name=NP_629699.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=NP_629699.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6062062	6062238	.	-	.	ID=id7250;Dbxref=GeneID:1101005;Note=Pfam match to entry PF00830 Ribosomal_L28%2C Ribosomal L28 family%2C score 74.50%2C E-value 2.2e-18.;gbkey=misc_feature;gene=rpmB
NC_003888.3	RefSeq	gene	6062511	6064280	.	+	.	ID=gene5626;Dbxref=GeneID:1101006;Name=SC7A1.09;gbkey=Gene;gene=SC7A1.09;gene_biotype=protein_coding;gene_synonym=SC7A1.09;locus_tag=SCO5565
NC_003888.3	RefSeq	CDS	6062511	6064280	.	+	0	ID=cds5515;Parent=gene5626;Dbxref=Genbank:NP_629700.1,GeneID:1101006;Name=NP_629700.1;Note=SC7A1.09%2C unknown%2C len: 589 aa%3B similar to several hypothetical proteins eg.TR:O34751 (EMBL:Z99112) YLOV protein from Bacillus subtilis (553 aa) fasta scores%3B opt: 656%2C z-score: 464.3%2C E(): 1.4e-18%2C (28.9%25 identity in 582 aa overlap) and to TR:AAK47378 (EMBL:AE007126) Mycobacterium tuberculosis CDC1551 hypothetical protein MT3052%2C 470 aa%3B fasta scores: opt: 772 Z-score: 726.0 E(): 8.3e-33%3B 40.974%25 identity in 493 aa overlap;gbkey=CDS;gene=SC7A1.09;product=hypothetical protein;protein_id=NP_629700.1;transl_table=11
NC_003888.3	RefSeq	gene	6064343	6066571	.	+	.	ID=gene5627;Dbxref=GeneID:1101007;Name=SC7A1.10;gbkey=Gene;gene=SC7A1.10;gene_biotype=protein_coding;gene_synonym=SC7A1.10;locus_tag=SCO5566
NC_003888.3	RefSeq	CDS	6064343	6066571	.	+	0	ID=cds5516;Parent=gene5627;Dbxref=Genbank:NP_629701.1,GeneID:1101007;Name=NP_629701.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;gene=SC7A1.10;product=ATP-dependent DNA helicase RecG;protein_id=NP_629701.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6065258	6065281	.	+	.	ID=id7251;Dbxref=GeneID:1101007;Note=PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC7A1.10
NC_003888.3	RefSeq	sequence_feature	6065987	6066232	.	+	.	ID=id7252;Dbxref=GeneID:1101007;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 67.50%2C E-value 2.8e-16;gbkey=misc_feature;gene=SC7A1.10
NC_003888.3	RefSeq	gene	6066627	6067214	.	+	.	ID=gene5628;Dbxref=GeneID:1101008;Name=SC7A1.11;gbkey=Gene;gene=SC7A1.11;gene_biotype=protein_coding;gene_synonym=SC7A1.11;locus_tag=SCO5567
NC_003888.3	RefSeq	CDS	6066627	6067214	.	+	0	ID=cds5517;Parent=gene5628;Dbxref=Genbank:NP_629702.1,GeneID:1101008;Name=NP_629702.1;Note=SC7A1.11%2C possible DNA methylase%2C len: 195aa%3B similar to many hypotheticals some of which contain PS00092 N-6 Adenine-specific DNA methylases signature eg. SW:YHHF_ECOLI hypothetical protein from Escherichia coli (198 aa) fasta scores%3B opt: 340%2C z-score: 430.7%2C E(): 1.1e-16%2C (35.8%25 identity in 193 aa overlap). Contains PS00092 N-6 Adenine-specific DNA methylases signature although not in the expected N-terminal region.;gbkey=CDS;gene=SC7A1.11;product=DNA methylase;protein_id=NP_629702.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6066984	6067004	.	+	.	ID=id7253;Dbxref=GeneID:1101008;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;gene=SC7A1.11
NC_003888.3	RefSeq	gene	6067241	6067720	.	+	.	ID=gene5629;Dbxref=GeneID:1101009;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;gene_synonym=SC7A1.12;locus_tag=SCO5568
NC_003888.3	RefSeq	CDS	6067241	6067720	.	+	0	ID=cds5518;Parent=gene5629;Dbxref=Genbank:NP_629703.1,GeneID:1101009;Name=NP_629703.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=NP_629703.1;transl_table=11
NC_003888.3	RefSeq	gene	6067854	6068993	.	+	.	ID=gene5630;Dbxref=GeneID:1101010;Name=SC7A1.13;gbkey=Gene;gene=SC7A1.13;gene_biotype=protein_coding;gene_synonym=SC7A1.13;locus_tag=SCO5569
NC_003888.3	RefSeq	CDS	6067854	6068993	.	+	0	ID=cds5519;Parent=gene5630;Dbxref=Genbank:NP_629704.1,GeneID:1101010;Name=NP_629704.1;Note=SC7A1.13%2C unknown%2C len: 379 aa%3B similar to TR:O69467 (EMBL:AL023635) hypothetical protein from Mycobacterium tuberculosis (245 aa) fasta scores%3B opt: 254%2C z-score: 388.8%2C E(): 2.3e-14%2C (29.5%25 identity in 234 aa overlap). Contains probable coiled-coil from 82 to 124 (43 residues) Max score: 1.615 (probability 1.00).;gbkey=CDS;gene=SC7A1.13;product=hypothetical protein;protein_id=NP_629704.1;transl_table=11
NC_003888.3	RefSeq	gene	6069138	6069791	.	+	.	ID=gene5631;Dbxref=GeneID:1101011;Name=SC7A1.14;gbkey=Gene;gene=SC7A1.14;gene_biotype=protein_coding;gene_synonym=SC7A1.14;locus_tag=SCO5570
NC_003888.3	RefSeq	CDS	6069138	6069791	.	+	0	ID=cds5520;Parent=gene5631;Dbxref=Genbank:NP_629705.1,GeneID:1101011;Name=NP_629705.1;Note=SC7A1.14%2C unknown%2C len: 217 aa%3B similar to Y06F_MYCTU hypothetical protein from Mycobacterium tuberculosis (207 aa) fasta scores%3B opt: 244%2C z-score: 699.9%2C E(): 1.1e-31%2C (45.5%25 identity in 189 aa overlap).;gbkey=CDS;gene=SC7A1.14;product=hypothetical protein;protein_id=NP_629705.1;transl_table=11
NC_003888.3	RefSeq	gene	6069794	6069967	.	+	.	ID=gene5632;Dbxref=GeneID:1101012;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;gene_synonym=SC7A1.15;locus_tag=SCO5571
NC_003888.3	RefSeq	CDS	6069794	6069967	.	+	0	ID=cds5521;Parent=gene5632;Dbxref=Genbank:NP_629706.1,GeneID:1101012;Name=NP_629706.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=NP_629706.1;transl_table=11
NC_003888.3	RefSeq	gene	6069987	6070805	.	+	.	ID=gene5633;Dbxref=GeneID:1101013;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;gene_synonym=SC7A1.16;locus_tag=SCO5572
NC_003888.3	RefSeq	CDS	6069987	6070805	.	+	0	ID=cds5522;Parent=gene5633;Dbxref=Genbank:NP_629707.1,GeneID:1101013;Name=NP_629707.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=NP_629707.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6070173	6070445	.	+	.	ID=id7254;Dbxref=GeneID:1101013;Note=Pfam match to entry PF00636 Ribonuclease_3%2C RNase3 domain.%2C score 147.60%2C E-value 2.2e-40;gbkey=misc_feature;gene=rnc
NC_003888.3	RefSeq	sequence_feature	6070173	6070199	.	+	.	ID=id7255;Dbxref=GeneID:1101013;Note=PS00517 Ribonuclease III family signature.;gbkey=misc_feature;gene=rnc
NC_003888.3	RefSeq	sequence_feature	6070527	6070724	.	+	.	ID=id7256;Dbxref=GeneID:1101013;Note=Pfam match to entry PF00035 dsrm%2C Double-stranded RNA binding motif%2C score 47.10%2C E-value 4e-10;gbkey=misc_feature;gene=rnc
NC_003888.3	RefSeq	repeat_region	6070818	6070863	.	+	.	ID=id7257;Note=inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6070914	6071774	.	+	.	ID=gene5634;Dbxref=GeneID:1101014;Name=SC7A1.17;gbkey=Gene;gene=SC7A1.17;gene_biotype=protein_coding;gene_synonym=SC7A1.17;locus_tag=SCO5573
NC_003888.3	RefSeq	CDS	6070914	6071774	.	+	0	ID=cds5523;Parent=gene5634;Dbxref=Genbank:NP_629708.1,GeneID:1101014;Name=NP_629708.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;gene=SC7A1.17;product=formamidopyrimidine-DNA glycosylase;protein_id=NP_629708.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6070914	6071750	.	+	.	ID=id7258;Dbxref=GeneID:1101014;Note=Pfam match to entry PF01149 Fapy_DNA_glyco%2C Formamidopyrimidine-DNA glycosylase%2C score 390.10%2C E-value 2.2e-113;gbkey=misc_feature;gene=SC7A1.17
NC_003888.3	RefSeq	gene	6071764	6072189	.	-	.	ID=gene5635;Dbxref=GeneID:1101015;Name=SC7A1.18c;gbkey=Gene;gene=SC7A1.18c;gene_biotype=protein_coding;gene_synonym=SC7A1.18c;locus_tag=SCO5574
NC_003888.3	RefSeq	CDS	6071764	6072189	.	-	0	ID=cds5524;Parent=gene5635;Dbxref=Genbank:NP_629709.1,GeneID:1101015;Name=NP_629709.1;Note=SC7A1.18c%2C conserved hypothetical protein%2C len: 141aa%3B similar to many eg. SW:YTFH_ECOLI from Escherichia coli (156 aa) fasta scores%3B opt: 396%2C z-score: 679.8%2C E(): 1.4e-30%2C (48.9%25 identity in 131 aa overlap) Also similar to SC1F2.10 (EMBL:AL031350) unknown protein from Streptomyces coelicolor (135 aa) fasta scores%3B opt: 305%2C z-score: 398.0%2C E(): 2.2e-17 (42.4%25 identity in 132 aa overlap).;gbkey=CDS;gene=SC7A1.18c;product=hypothetical protein;protein_id=NP_629709.1;transl_table=11
NC_003888.3	RefSeq	gene	6072276	6073466	.	-	.	ID=gene5636;Dbxref=GeneID:1101016;Name=SC7A1.19c;gbkey=Gene;gene=SC7A1.19c;gene_biotype=protein_coding;gene_synonym=SC7A1.19c;locus_tag=SCO5575
NC_003888.3	RefSeq	CDS	6072276	6073466	.	-	0	ID=cds5525;Parent=gene5636;Dbxref=Genbank:NP_629710.1,GeneID:1101016;Name=NP_629710.1;Note=SC7A1.19c%2C possible transmembrane protein%2C len: 396aa%3B some similarity to TR:O31398 (EMBL:AJ222587) hypothetical%2C protein from Bacillus subtilis (257 aa) opt: 341%2C z-score: 212.5%2C E(): 0.00015%2C (39.5%25 identity in 167 aa overlap). GC rich 17100-17400. Contains possible transmembrane region.;gbkey=CDS;gene=SC7A1.19c;product=transmembrane protein;protein_id=NP_629710.1;transl_table=11
NC_003888.3	RefSeq	gene	6073650	6073931	.	+	.	ID=gene5637;Dbxref=GeneID:1101017;Name=SC7A1.20;gbkey=Gene;gene=SC7A1.20;gene_biotype=protein_coding;gene_synonym=SC7A1.20;locus_tag=SCO5576
NC_003888.3	RefSeq	CDS	6073650	6073931	.	+	0	ID=cds5526;Parent=gene5637;Dbxref=Genbank:NP_629711.1,GeneID:1101017;Name=NP_629711.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;gene=SC7A1.20;product=acylphosphatase;protein_id=NP_629711.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6073680	6073712	.	+	.	ID=id7259;Dbxref=GeneID:1101017;Note=PS00150 Acylphosphatase signature 1.;gbkey=misc_feature;gene=SC7A1.20
NC_003888.3	RefSeq	gene	6074834	6078394	.	+	.	ID=gene5638;Dbxref=GeneID:1101018;Name=SC7A1.21;gbkey=Gene;gene=SC7A1.21;gene_biotype=protein_coding;gene_synonym=SC7A1.21;locus_tag=SCO5577
NC_003888.3	RefSeq	CDS	6074834	6078394	.	+	0	ID=cds5527;Parent=gene5638;Dbxref=Genbank:NP_629712.1,GeneID:1101018;Name=NP_629712.1;Note=SC7A1.21%2C possible chromosome associated protein%2C len: 1186aa%3B similar to many hypotheticals eg. SW:Y06B_MYCTU hypothetical protein from Mycobacterium tuberculosis (1289 aa) fasta scores%3B opt: 2637%2C z-score: 2806.3%2C E(): 0%2C (53.1%25 identity in 1205 aa overlap) with weak similarity to a family of chromosome associated proteins e.g. SW:SCII_CHICK chromosome scaffold protein SCII from chicken (Gallus gallus) (1189 aa) opt: 370%2C z-score: 383.3%2C E(): 4.7e-14%2C (22.6%25 identity in 1246 aa overlap). Contains PS00017 ATP /GTP-binding site motif A (P-loop). Also contains 2 probable coiled coil regions from 162 to 492 and from 654 to 1041.;gbkey=CDS;gene=SC7A1.21;product=chromosome associated protein;protein_id=NP_629712.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6074924	6074947	.	+	.	ID=id7260;Dbxref=GeneID:1101018;Note=PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC7A1.21
NC_003888.3	RefSeq	gene	6078582	6080000	.	+	.	ID=gene5639;Dbxref=GeneID:1101019;Name=SC7A1.22;gbkey=Gene;gene=SC7A1.22;gene_biotype=protein_coding;gene_synonym=SC7A1.22;locus_tag=SCO5578
NC_003888.3	RefSeq	CDS	6078582	6080000	.	+	0	ID=cds5528;Parent=gene5639;Dbxref=Genbank:NP_629713.1,GeneID:1101019;Name=NP_629713.1;Note=SC7A1.22%2C sugar transporter%2C len: aa%3B similar to many eg. SW:GLCP_SYNY3 glucose transport protein from Synechocystis sp. (468 aa) fasta scores%3B opt: 1477%2C z-score: 1527.5%2C E(): 0%2C (50.6%25 identity in 468 aa overlap). Contains PS00217 Sugar transport proteins signature 2%2C PS00216 Sugar transport proteins signature 1 and Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 404.10%2C E-value 1.3e-117. Also contains several possible transmembrane regions.;gbkey=CDS;gene=SC7A1.22;product=sugar transporter;protein_id=NP_629713.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6078657	6080006	.	+	.	ID=id7261;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 404.10%2C E-value 1.3e-117;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6078945	6079022	.	+	.	ID=id7262;Dbxref=GeneID:1101019;Note=PS00217 Sugar transport proteins signature 2.;gbkey=misc_feature;gene=SC7A1.22
NC_003888.3	RefSeq	sequence_feature	6079563	6079616	.	+	.	ID=id7263;Dbxref=GeneID:1101019;Note=PS00216 Sugar transport proteins signature 1.;gbkey=misc_feature;gene=SC7A1.22
NC_003888.3	RefSeq	gene	6080126	6081583	.	-	.	ID=gene5640;Dbxref=GeneID:1101020;Name=SC7A1.23c;gbkey=Gene;gene=SC7A1.23c;gene_biotype=protein_coding;gene_synonym=SC7A1.23c;locus_tag=SCO5579
NC_003888.3	RefSeq	CDS	6080126	6081583	.	-	0	ID=cds5529;Parent=gene5640;Dbxref=Genbank:NP_629714.1,GeneID:1101020;Name=NP_629714.1;Note=SC7A1.23c%2C possible transmembrane protein%2C len: 485aa%3B similar to many and hypothetical proteins eg. EMBL:E1312898  transmembrane transport protein from Streptomyces coelicolor (476 aa) fasta scores%3B opt: 482%2C z-score: 311.0%2C E(): 5e-10%2C (26.4%25 identity in 473 aa overlap) Also weakly similar to SW:BETT_ECOLI high-affinity choline transport protein from Escherichia coli (677 aa) opt: 74%2C z-score: 196.3%2C E(): 0.0012%2C (23.0%25 identity in 283 aa overlap). Contains several possible transmembrane regions. Also similar to SC1C2.05c (EMBL:AL031124) possible transmembrane transport protein from Streptomyces coelicolor (476 aa) fasta scores%3B opt: 482%2C z-score: 215.0%2C E(): 3.4e-07%2C (26.4%25 identity in 473 aa overlap);gbkey=CDS;gene=SC7A1.23c;product=transmembrane protein;protein_id=NP_629714.1;transl_table=11
NC_003888.3	RefSeq	gene	6081738	6082976	.	+	.	ID=gene5641;Dbxref=GeneID:1101021;Name=SC7A1.24;gbkey=Gene;gene=SC7A1.24;gene_biotype=protein_coding;gene_synonym=SC7A1.24;locus_tag=SCO5580
NC_003888.3	RefSeq	CDS	6081738	6082976	.	+	0	ID=cds5530;Parent=gene5641;Dbxref=Genbank:NP_629715.1,GeneID:1101021;Name=NP_629715.1;Note=SC7A1.24%2C ftsY%2C prokaryotic docking protein%2C len: 412aa%3B similar to many including SW:FTSY_ECOLI functional homolog of the mammalian SRP receptor (docking protein) from Escherichia coli (497 aa) fasta scores%3B opt: 885%2C z-score: 906.8%2C E(): 0%2C (40.7%25 identity in 388 aa overlap). Contains PS00017 ATP /GTP-binding site motif A (P-loop)%2C PS00300 SRP54-type proteins GTP-binding domain signature and Pfam match to entry PF00448 SRP54%2C SRP54-type protein%2C score 323.90%2C E-value 1.8e-93. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC7A1.24;product=docking protein;protein_id=NP_629715.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6082155	6082967	.	+	.	ID=id7264;Dbxref=GeneID:1101021;Note=Pfam match to entry PF00448 SRP54%2C SRP54-type protein%2C score 323.90%2C E-value 1.8e-93;gbkey=misc_feature;gene=SC7A1.24
NC_003888.3	RefSeq	sequence_feature	6082392	6082415	.	+	.	ID=id7265;Dbxref=GeneID:1101021;Note=PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC7A1.24
NC_003888.3	RefSeq	sequence_feature	6082887	6082928	.	+	.	ID=id7266;Dbxref=GeneID:1101021;Note=PS00300 SRP54-type proteins GTP-binding domain signature.;gbkey=misc_feature;gene=SC7A1.24
NC_003888.3	RefSeq	gene	6083101	6083772	.	-	.	ID=gene5642;Dbxref=GeneID:1101022;Name=SC7A1.25c;gbkey=Gene;gene=SC7A1.25c;gene_biotype=protein_coding;gene_synonym=SC7A1.25c;locus_tag=SCO5581
NC_003888.3	RefSeq	CDS	6083101	6083772	.	-	0	ID=cds5531;Parent=gene5642;Dbxref=Genbank:NP_629716.1,GeneID:1101022;Name=NP_629716.1;Note=SC7A1.25c%2C hypothetical protein%2C len: 223 aa%3B similar to TR:Q9K3U7 (EMBL:AL359988) Streptomyces coelicolor conserved hypothetical protein SCD10.30c%2C 217 aa%3B fasta scores: opt: 514 Z-score: 547.5 E(): 7.3e-23%3B 44.974%25 identity in 189 aa overlap;gbkey=CDS;gene=SC7A1.25c;product=hypothetical protein;protein_id=NP_629716.1;transl_table=11
NC_003888.3	RefSeq	gene	6084219	6085721	.	+	.	ID=gene5643;Dbxref=GeneID:1101023;Name=SC7A1.26;gbkey=Gene;gene=SC7A1.26;gene_biotype=protein_coding;gene_synonym=SC7A1.26;locus_tag=SCO5582
NC_003888.3	RefSeq	CDS	6084219	6085721	.	+	0	ID=cds5532;Parent=gene5643;Dbxref=Genbank:NP_629717.1,GeneID:1101023;Name=NP_629717.1;Note=SC7A1.26%2C possible regulator%2C len: 500aa%3B similar to TR:Q53958 (EMBL:M80614) sporulation-associated protein from Streptomyces coelicolor (473 aa) fasta scores%3B opt: 612%2C z-score: 589.9%2C E(): 1.5e-25%2C (31.3%25 identity in 485 aa overlap) and TR:E1319689 (EMBL:AL031541)  transcriptional regulator from Streptomyces coelicolor (446 aa) fasta scores%3B opt: 279%2C z-score: 413.7%2C E(): 9.5e-16%2C (25.9%25 identity in 478 aa overlap);gbkey=CDS;gene=SC7A1.26;product=regulator;protein_id=NP_629717.1;transl_table=11
NC_003888.3	RefSeq	gene	6086031	6087377	.	+	.	ID=gene5644;Dbxref=GeneID:1101024;Name=SC7A1.27;gbkey=Gene;gene=SC7A1.27;gene_biotype=protein_coding;gene_synonym=SC7A1.27;locus_tag=SCO5583
NC_003888.3	RefSeq	CDS	6086031	6087377	.	+	0	ID=cds5533;Parent=gene5644;Dbxref=Genbank:NP_629718.1,GeneID:1101024;Name=NP_629718.1;Note=SC7A1.27%2C amt%2C ammonium transporter%2C len: 448 aa%3B similar to many eg. TR:O67997 (EMBL:AF005275) (438 aa) fasta scores%3B opt: 1224%2C z-score: 1126.9%2C E(): 0%2C (47.1%25 identity in 414 aa overlap). Contains PS01219 Ammonium transporters signature and Pfam match to entry PF00909 Ammonium_transp%2C Ammonium Transporter Family%2C score 537.00%2C E-value 1.3e-157.;gbkey=CDS;gene=SC7A1.27;product=ammonium transporter;protein_id=NP_629718.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6086085	6087281	.	+	.	ID=id7267;Dbxref=GeneID:1101024;Note=Pfam match to entry PF00909 Ammonium_transp%2C Ammonium Transporter Family%2C score 537.00%2C E-value 1.3e-157;gbkey=misc_feature;gene=SC7A1.27
NC_003888.3	RefSeq	sequence_feature	6086544	6086621	.	+	.	ID=id7268;Dbxref=GeneID:1101024;Note=PS01219 Ammonium transporters signature.;gbkey=misc_feature;gene=SC7A1.27
NC_003888.3	RefSeq	gene	6087374	6087712	.	+	.	ID=gene5645;Dbxref=GeneID:1101025;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;gene_synonym=glnB,SC7A1.28;locus_tag=SCO5584
NC_003888.3	RefSeq	CDS	6087374	6087712	.	+	0	ID=cds5534;Parent=gene5645;Dbxref=Genbank:NP_733668.1,GeneID:1101025;Name=NP_733668.1;Note=SC2E1.01%2C glnB%2C nitrogen regulatory protein P-II%2C partial CDS%2C len: >54 aa%3B highly similar to many e.g. GLNB_AZOBR (112 aa)%2C fasta scores%3B opt: 198 z-score: 381.9 E(): 4.9e-14%2C 50.0%25 identity in 54 aa overlap~SC7A1.28%2C partial CDS%2C glnB%2C nitrogen regulatory protein P-II%2C len: 92aa%3B similar to many eg. SW:GLNB_RHIME nitrogen regulatory protein P-II from Rhizobium meliloti (112 aa) fasta scores%3B opt: 402%2C z-score: 776.2%2C E(): 0%2C (58.7%25 identity in 92 aa overlap). Contains PS00496 P-II protein urydylation site and Pfam match to entry PF00543 P-II%2C Nitrogen regulatory protein P-II%2C score 116.60%2C E-value 7.1e-34.;gbkey=CDS;gene=glnB;product=nitrogen regulatory protein P-II;protein_id=NP_733668.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6087374	6087643	.	+	.	ID=id7269;Dbxref=GeneID:1101025;Note=Pfam match to entry PF00543 P-II%2C Nitrogen regulatory protein P-II%2C score 116.60%2C E-value 7.1e-34;gbkey=misc_feature;gene=glnB
NC_003888.3	RefSeq	sequence_feature	6087509	6087526	.	+	.	ID=id7270;Dbxref=GeneID:1101025;Note=PS00496 P-II protein urydylation site.;gbkey=misc_feature;gene=glnB
NC_003888.3	RefSeq	sequence_feature	6087547	6087652	.	+	.	ID=id7271;Dbxref=GeneID:1101025;Note=Overlap with Streptomyces coelicolor cosmid 2E1 (EMBL:AL023797).;gbkey=misc_feature;gene=glnB
NC_003888.3	RefSeq	gene	6087777	6090284	.	+	.	ID=gene5646;Dbxref=GeneID:1101026;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;gene_synonym=glnD;locus_tag=SCO5585
NC_003888.3	RefSeq	CDS	6087777	6090284	.	+	0	ID=cds5535;Parent=gene5646;Dbxref=Genbank:NP_629719.1,GeneID:1101026;Name=NP_629719.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein%3B also involved in adenylylating and deadelnylyating GlnK;gbkey=CDS;gene=glnD;product=PII uridylyl-transferase;protein_id=NP_629719.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6089637	6089699	.	+	.	ID=id7272;Dbxref=GeneID:1101026;Note=7 degenerate 9bp repeats;gbkey=repeat_region;gene=glnD
NC_003888.3	RefSeq	ribosome_entry_site	6090265	6090269	.	+	.	ID=id7273;Dbxref=GeneID:1101026;Note=possible RBS upstream of ffh;gbkey=RBS;gene=glnD
NC_003888.3	RefSeq	gene	6090281	6091933	.	+	.	ID=gene5647;Dbxref=GeneID:1101027;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;gene_synonym=ffh;locus_tag=SCO5586
NC_003888.3	RefSeq	CDS	6090281	6091933	.	+	0	ID=cds5536;Parent=gene5647;Dbxref=Genbank:NP_629720.1,GeneID:1101027;Name=NP_629720.1;Note=SC2E1.03%2C ffh%2C signal recognition particle protein%2C len: 550 aa%3B highly similar to mnay e.g. SR54_ECOLI (453 aa)%2C fatsa scores%3B opt: 1465 z-score: 1282.8 E(): 0%2C 50.0%25 identity in 458 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop)%2C PS00300 SRP54-type proteins GTP-binding domain signature and Pfam match to entry SRP54 PF00448%2C SRP54-type proteins%2C score 66.57. Similarities suggest possible start site at aa 35;gbkey=CDS;gene=ffh;product=signal recognition particle protein;protein_id=NP_629720.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6090701	6090724	.	+	.	ID=id7274;Dbxref=GeneID:1101027;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ffh
NC_003888.3	RefSeq	sequence_feature	6091112	6091243	.	+	.	ID=id7275;Dbxref=GeneID:1101027;Note=Pfam match to entry SRP54 PF00448%2C SRP54-type proteins%2C score 66.57;gbkey=misc_feature;gene=ffh
NC_003888.3	RefSeq	sequence_feature	6091193	6091234	.	+	.	ID=id7276;Dbxref=GeneID:1101027;Note=PS00300 SRP54-type proteins GTP-binding domain signature;gbkey=misc_feature;gene=ffh
NC_003888.3	RefSeq	stem_loop	6091951	6091999	.	+	.	ID=id7277;Note=hairpin loop with 22/23 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6092050	6093996	.	+	.	ID=gene5648;Dbxref=GeneID:1101028;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=SCO5587
NC_003888.3	RefSeq	CDS	6092050	6093996	.	+	0	ID=cds5537;Parent=gene5648;Dbxref=Genbank:NP_629721.1,GeneID:1101028;Name=NP_629721.1;Note=SC2E1.04%2C ftsH%2C cell division protein FtsH homolog (zinc metalloprotease%2C integral membrane protein)%2C len: 648 aa%3B similar to many e.g. FTSH_LACLA (695 aa)%2C fasta scores%3B opt: 1489 z-score: 1195.5 E(): 0%2C 41.7%25 identity in 640 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop)%2C PS00674 AAA-protein family signature and Pfam matches to entry AAA PF00004%2C ATPases associated with various cellular activities (AAA) and to entry zn-protease PF00099%2C Zinc-binding metalloprotease domain%2C score 22.07%2C score 357.96. Proline-rich N-terminus is not present in other ftsH homologs;gbkey=CDS;gene=ftsH;product=cell division protein FtsH-like protein;protein_id=NP_629721.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6092761	6093327	.	+	.	ID=id7278;Dbxref=GeneID:1101028;Note=Pfam match to entry AAA PF00004%2C ATPases associated with various cellular activities (AAA)%2C score 357.96;gbkey=misc_feature;gene=ftsH
NC_003888.3	RefSeq	sequence_feature	6092776	6092799	.	+	.	ID=id7279;Dbxref=GeneID:1101028;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ftsH
NC_003888.3	RefSeq	sequence_feature	6093076	6093132	.	+	.	ID=id7280;Dbxref=GeneID:1101028;Note=PS00674 AAA-protein family signature;gbkey=misc_feature;gene=ftsH
NC_003888.3	RefSeq	sequence_feature	6093430	6093477	.	+	.	ID=id7281;Dbxref=GeneID:1101028;Note=Pfam match to entry zn-protease PF00099%2C Zinc-binding metalloprotease domain%2C score 22.07;gbkey=misc_feature;gene=ftsH
NC_003888.3	RefSeq	gene	6094014	6094631	.	-	.	ID=gene5649;Dbxref=GeneID:1101029;Name=SC2E1.05c;gbkey=Gene;gene=SC2E1.05c;gene_biotype=protein_coding;gene_synonym=SC2E1.05c;locus_tag=SCO5588
NC_003888.3	RefSeq	CDS	6094014	6094631	.	-	0	ID=cds5538;Parent=gene5649;Dbxref=Genbank:NP_629722.1,GeneID:1101029;Name=NP_629722.1;Note=SC2E1.05c%2C probable lipoprotein%2C len: 205 aa%3B contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC2E1.05c;product=lipoprotein;protein_id=NP_629722.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6094560	6094592	.	-	.	ID=id7282;Dbxref=GeneID:1101029;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC2E1.05c
NC_003888.3	RefSeq	ribosome_entry_site	6094638	6094642	.	-	.	ID=id7283;Note=possible RBS upstream of Sc2E1.05c;gbkey=RBS
NC_003888.3	RefSeq	gene	6094782	6095669	.	-	.	ID=gene5650;Dbxref=GeneID:1101030;Name=SC2E1.06c;gbkey=Gene;gene=SC2E1.06c;gene_biotype=protein_coding;gene_synonym=SC2E1.06c;locus_tag=SCO5589
NC_003888.3	RefSeq	CDS	6094782	6095669	.	-	0	ID=cds5539;Parent=gene5650;Dbxref=Genbank:NP_629723.1,GeneID:1101030;Name=NP_629723.1;Note=SC2E1.06c%2C unknown%2C len: 295 aa;gbkey=CDS;gene=SC2E1.06c;product=hypothetical protein;protein_id=NP_629723.1;transl_table=11
NC_003888.3	RefSeq	gene	6096339	6096935	.	+	.	ID=gene5651;Dbxref=GeneID:1101031;Name=SC2E1.07;gbkey=Gene;gene=SC2E1.07;gene_biotype=protein_coding;gene_synonym=SC2E1.07;locus_tag=SCO5590
NC_003888.3	RefSeq	CDS	6096339	6096935	.	+	0	ID=cds5540;Parent=gene5651;Dbxref=Genbank:NP_629724.1,GeneID:1101031;Name=NP_629724.1;Note=SC2E1.07%2C unknown%2C len: 198 aa;gbkey=CDS;gene=SC2E1.07;product=hypothetical protein;protein_id=NP_629724.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6097175	6097179	.	+	.	ID=id7284;Note=possible RBS upstream of rpsP;gbkey=RBS
NC_003888.3	RefSeq	gene	6097191	6097610	.	+	.	ID=gene5652;Dbxref=GeneID:1101032;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=SCO5591
NC_003888.3	RefSeq	CDS	6097191	6097610	.	+	0	ID=cds5541;Parent=gene5652;Dbxref=Genbank:NP_629725.1,GeneID:1101032;Name=NP_629725.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=NP_629725.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6097197	6097226	.	+	.	ID=id7285;Dbxref=GeneID:1101032;Note=PS00732 Ribosomal protein S16 signature;gbkey=misc_feature;gene=rpsP
NC_003888.3	RefSeq	ribosome_entry_site	6097602	6097605	.	+	.	ID=id7286;Dbxref=GeneID:1101032;Note=possible RBS upstream of SC2E1.09;gbkey=RBS;gene=rpsP
NC_003888.3	RefSeq	gene	6097613	6097852	.	+	.	ID=gene5653;Dbxref=GeneID:1101033;Name=SC2E1.09;gbkey=Gene;gene=SC2E1.09;gene_biotype=protein_coding;gene_synonym=SC2E1.09;locus_tag=SCO5592
NC_003888.3	RefSeq	CDS	6097613	6097852	.	+	0	ID=cds5542;Parent=gene5653;Dbxref=Genbank:NP_629726.1,GeneID:1101033;Name=NP_629726.1;Note=SC2E1.09%2C unknown%2C len: 79 aa%3B highly similar to small hypothetical proteins from several organisms%2C e.g. YX40_MYCTU MTCY274.40c (80 aa)%2C fasta scores%3B opt: 356 z-score:628.4 E(): 9.1e-28%2C 71.6%25 identity in 74 aa overlap;gbkey=CDS;gene=SC2E1.09;product=hypothetical protein;protein_id=NP_629726.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6097949	6097953	.	+	.	ID=id7287;Note=possible RBS upstream of SC2E1.10;gbkey=RBS
NC_003888.3	RefSeq	gene	6097964	6098530	.	+	.	ID=gene5654;Dbxref=GeneID:1101034;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;gene_synonym=SC2E1.10;locus_tag=SCO5593
NC_003888.3	RefSeq	CDS	6097964	6098530	.	+	0	ID=cds5543;Parent=gene5654;Dbxref=Genbank:NP_629727.1,GeneID:1101034;Name=NP_629727.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;protein_id=NP_629727.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6098522	6098525	.	+	.	ID=id7288;Dbxref=GeneID:1101034;Note=possible RBS upstream of trmD;gbkey=RBS;gene=rimM
NC_003888.3	RefSeq	gene	6098530	6099363	.	+	.	ID=gene5655;Dbxref=GeneID:1101035;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=SCO5594
NC_003888.3	RefSeq	CDS	6098530	6099363	.	+	0	ID=cds5544;Parent=gene5655;Dbxref=Genbank:NP_629728.1,GeneID:1101035;Name=NP_629728.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=NP_629728.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6099485	6099488	.	+	.	ID=id7289;Note=possible RBS upstream of rplS;gbkey=RBS
NC_003888.3	RefSeq	gene	6099500	6099850	.	+	.	ID=gene5656;Dbxref=GeneID:1101036;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=SCO5595
NC_003888.3	RefSeq	CDS	6099500	6099850	.	+	0	ID=cds5545;Parent=gene5656;Dbxref=Genbank:NP_629729.1,GeneID:1101036;Name=NP_629729.1;Note=this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site;gbkey=CDS;gene=rplS;product=50S ribosomal protein L19;protein_id=NP_629729.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6099761	6099802	.	+	.	ID=id7290;Dbxref=GeneID:1101036;Note=PS01015 Ribosomal protein L19 signature;gbkey=misc_feature;gene=rplS
NC_003888.3	RefSeq	gene	6099896	6100675	.	+	.	ID=gene5657;Dbxref=GeneID:1101037;Name=sip1;gbkey=Gene;gene=sip1;gene_biotype=protein_coding;gene_synonym=sip1;locus_tag=SCO5596
NC_003888.3	RefSeq	CDS	6099896	6100675	.	+	0	ID=cds5546;Parent=gene5657;Dbxref=Genbank:NP_629730.1,GeneID:1101037;Name=NP_629730.1;Note=SC2E1.13%2C sip1%2C probable signal peptidase I%2C len: 259 aa%3B similar to many e.g. LEP_HAEIN signal peptidase I (EC 3.4.21.89) (349 aa)%2C fasta scores%3B opt: 162 z-score: 381.2 E(): 5.3e-14%2C 32.5%25 identity in 243 aa overlap%2C though with large internal deletions. Contains PS00761 Signal peptidases I signature 3%2C Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C score 51.12 and probable transmembrane domain. Also similar to downstream genes sip2 (E(): 9.7e-26%2C 44.9%25 identity in 274 aa overlap)%2C sip3 (E(): 4.8e-16%2C 35.6%25 identity in 264 aa overlap) and sip4 (E(): 8.7e-08%2C 37.0%25 identity in 219 aa overlap). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=sip1;product=signal peptidase I;protein_id=NP_629730.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6099915	6100001	.	+	.	ID=id7291;Dbxref=GeneID:1101037;Note=hairpin loop with 34/41 bp stem;gbkey=stem_loop;gene=sip1
NC_003888.3	RefSeq	sequence_feature	6100055	6100345	.	+	.	ID=id7292;Dbxref=GeneID:1101037;Note=Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C score 51.12;gbkey=misc_feature;gene=sip1
NC_003888.3	RefSeq	sequence_feature	6100415	6100456	.	+	.	ID=id7293;Dbxref=GeneID:1101037;Note=PS00761 Signal peptidases I signature 3;gbkey=misc_feature;gene=sip1
NC_003888.3	RefSeq	gene	6100668	6102008	.	+	.	ID=gene5658;Dbxref=GeneID:1101038;Name=sip2;gbkey=Gene;gene=sip2;gene_biotype=protein_coding;gene_synonym=sip2;locus_tag=SCO5597
NC_003888.3	RefSeq	CDS	6100668	6102008	.	+	0	ID=cds5547;Parent=gene5658;Dbxref=Genbank:NP_629731.1,GeneID:1101038;Name=NP_629731.1;Note=SC2E1.14%2C sip2%2C probable signal peptidase I%2C len: 446 aa%3B similar to many e.g. LEP_HAEIN signal peptidase I (EC 3.4.21.89) (349 aa)%2C fasta scores%3B opt: 151%2C z-score: 317.3 E(): 1.9e-10%2C 30.1%25 identity in 286 aa overlap. Contains PS00761 Signal peptidases I signature 3%2C Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C score 42.41 and probable transmembrane domain. Also similar to surrounding genes sip1 (E(): 9.7e-24%2C 44.9%25 identity in 274 aa overlap)%2C sip3 (E(): 1.8e-28%2C 56.3%25 identity in 245 aa overlap)%2C and sip4 (E(): 1.1e-09%2C 35.9%25 identity in 223 aa overlap). Note that after aa 325 the ORF overlaps the downstream sip3 gene SC2E1.15%2C and positional base preference suggests that translation is in the other frame. No error in the cosmid sequence can be found to account for this. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=sip2;product=signal peptidase I;protein_id=NP_629731.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6100782	6101030	.	+	.	ID=id7294;Dbxref=GeneID:1101038;Note=Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C score 42.41;gbkey=misc_feature;gene=sip2
NC_003888.3	RefSeq	sequence_feature	6101301	6101342	.	+	.	ID=id7295;Dbxref=GeneID:1101038;Note=PS00761 Signal peptidases I signature 3;gbkey=misc_feature;gene=sip2
NC_003888.3	RefSeq	sequence_feature	6101405	6102759	.	+	.	ID=id7296;Note=97.8%25 match to EMBL:SLTK24SIP Y09474 Streptomyces lividans sip gene%2C from 5 to 1359;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6101631	6101635	.	+	.	ID=id7297;Dbxref=GeneID:1101038;Note=possible RBS upstream of sip3;gbkey=RBS;gene=sip2
NC_003888.3	RefSeq	gene	6101641	6102651	.	+	.	ID=gene5659;Dbxref=GeneID:1101039;Name=sip3;gbkey=Gene;gene=sip3;gene_biotype=protein_coding;gene_synonym=sip3;locus_tag=SCO5598
NC_003888.3	RefSeq	CDS	6101641	6102651	.	+	0	ID=cds5548;Parent=gene5659;Dbxref=Genbank:NP_629732.1,GeneID:1101039;Name=NP_629732.1;Note=SC2E1.15%2C sip3%2C probable signal peptidase I%2C len: 336 aa%3B identical to%2C but longer than%2C S. lividans Sip TR:E1228248 (EMBL:Y09474) signal peptidase I (291 aa)%2C fasta scores%3B opt: 1997 z-score: 2287.4 E(): 0%2C 99.7%25 identity in 291 aa overlap%2C and similar to many others e.g. LEP_PHOLA signal peptidase I (EC 3.4.21.89) (203 aa)%2C fasta scores%3B opt:222 z-score: 404.9 E(): 2.6e-15%2C 37.9%25 identity in 232 aa overlap. Contains PS00761 Signal peptidases I signature 3%2C 2x Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C scores 48.83 and 46.79 and probable transmembrane domain. Also similar to surrounding genes sip1 (E(): 7.6e-20%2C 35.6%25 identity in 264 aa overlap)%2C sip2 (E(): 0%2C 56.3%25 identity in 245 aa overlap) and sip4 (E(): 6.6e-15%2C 36.3%25 identity in 237 aa overlap). Note that a more upstream start was chosen due to positional base preference. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=sip3;product=signal peptidase I;protein_id=NP_629732.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6101848	6102093	.	+	.	ID=id7298;Dbxref=GeneID:1101039;Note=Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C score 48.83;gbkey=misc_feature;gene=sip3
NC_003888.3	RefSeq	sequence_feature	6102178	6102453	.	+	.	ID=id7299;Dbxref=GeneID:1101039;Note=Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C score 46.79;gbkey=misc_feature;gene=sip3
NC_003888.3	RefSeq	sequence_feature	6102355	6102396	.	+	.	ID=id7300;Dbxref=GeneID:1101039;Note=PS00761 Signal peptidases I signature 3;gbkey=misc_feature;gene=sip3
NC_003888.3	RefSeq	ribosome_entry_site	6102743	6102748	.	+	.	ID=id7301;Note=possible RBS upstream of sip4;gbkey=RBS
NC_003888.3	RefSeq	gene	6102756	6103532	.	+	.	ID=gene5660;Dbxref=GeneID:1101040;Name=sip4;gbkey=Gene;gene=sip4;gene_biotype=protein_coding;gene_synonym=sip4;locus_tag=SCO5599
NC_003888.3	RefSeq	CDS	6102756	6103532	.	+	0	ID=cds5549;Parent=gene5660;Dbxref=Genbank:NP_629733.1,GeneID:1101040;Name=NP_629733.1;Note=SC2E1.16%2C sip4%2C probable signal peptidase I%2C len: 258 aa%3B similar to many e.g. LEPS_BACSU signal peptidase I (EC 3.4.21.89) (184 aa)%2C fasta scores%3B opt: 258 z-score: 337.6 E(): 1.4e-11%2C 32.2%25 identity in 177 aa overlap. Contains Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C score 49.57 and probable transmembrane domain. Also similar to upstream genes sip1 (E(): 8.8e-10%2C 36.5%25 identity in 219 aa overlap)%2C sip2 (E(): 3.8e-13%2C 35.9%25 identity in 223 aa overlap) and sip3 (E(): 8.1e-15%2C 35.4%25 identity in 237 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=sip4;product=signal peptidase I;protein_id=NP_629733.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6102801	6103151	.	+	.	ID=id7302;Dbxref=GeneID:1101040;Note=Pfam match to entry signal_pept_I PF00461%2C Signal peptidases I%2C score 49.57;gbkey=misc_feature;gene=sip4
NC_003888.3	RefSeq	gene	6103534	6104052	.	+	.	ID=gene5661;Dbxref=GeneID:1101041;Name=SC2E1.17;gbkey=Gene;gene=SC2E1.17;gene_biotype=protein_coding;gene_synonym=SC2E1.17;locus_tag=SCO5600
NC_003888.3	RefSeq	CDS	6103534	6104052	.	+	0	ID=cds5550;Parent=gene5661;Dbxref=Genbank:NP_629734.1,GeneID:1101041;Name=NP_629734.1;Note=SC2E1.17%2C unknown%2C len: 172 aa%3B similar to C-terminus of M. tuberculosis hypothetical protein TR:O06205 (EMBL:Z95387) MTCY1A10.24 (351 aa)%2C fasta scores%3B opt: 345 z-score: 375.2 E(): 1.2e-13%2C 44.7%25 identity in 161 aa overlap. Contains PS00893 mutT domain signature and Pfam match to entry mutT PF00293%2C Bacterial mutT protein%2C score 37.78;gbkey=CDS;gene=SC2E1.17;product=hypothetical protein;protein_id=NP_629734.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6103615	6103746	.	+	.	ID=id7303;Dbxref=GeneID:1101041;Note=Pfam match to entry mutT PF00293%2C Bacterial mutT protein%2C score 37.78;gbkey=misc_feature;gene=SC2E1.17
NC_003888.3	RefSeq	sequence_feature	6103678	6103737	.	+	.	ID=id7304;Dbxref=GeneID:1101041;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SC2E1.17
NC_003888.3	RefSeq	gene	6104109	6104417	.	+	.	ID=gene5662;Dbxref=GeneID:1101042;Name=SC2E1.18;gbkey=Gene;gene=SC2E1.18;gene_biotype=protein_coding;gene_synonym=SC2E1.18;locus_tag=SCO5601
NC_003888.3	RefSeq	CDS	6104109	6104417	.	+	0	ID=cds5551;Parent=gene5662;Dbxref=Genbank:NP_629735.1,GeneID:1101042;Name=NP_629735.1;Note=SC2E1.18%2C unknown%2C len: 102 aa%3B highly similar to M. tuberculosis hypothetical protein YX32_MYCTU MTCY274.32c (101 aa)%2C fasta scores%3B opt: 515 z-score: 1085.2 E(): 0%2C 75.0%25 identity in 100 aa overlap;gbkey=CDS;gene=SC2E1.18;product=hypothetical protein;protein_id=NP_629735.1;transl_table=11
NC_003888.3	RefSeq	gene	6104476	6104868	.	+	.	ID=gene5663;Dbxref=GeneID:1101043;Name=SC2E1.19;gbkey=Gene;gene=SC2E1.19;gene_biotype=protein_coding;gene_synonym=SC2E1.19;locus_tag=SCO5602
NC_003888.3	RefSeq	CDS	6104476	6104868	.	+	0	ID=cds5552;Parent=gene5663;Dbxref=Genbank:NP_629736.1,GeneID:1101043;Name=NP_629736.1;Note=SC2E1.19%2C unknown%2C len: 130 aa%3B similar to M. tuberculosis hypothetical protein YX29_MYCTU MTCY274.29c (128 aa)%2C fasta scores%3B opt: 253 z-score: 276.8 E(): 3.5e-08%2C 39.7%25 identity in 121 aa overlap;gbkey=CDS;gene=SC2E1.19;product=hypothetical protein;protein_id=NP_629736.1;transl_table=11
NC_003888.3	RefSeq	gene	6104868	6106493	.	+	.	ID=gene5664;Dbxref=GeneID:1101044;Name=SC2E1.20;gbkey=Gene;gene=SC2E1.20;gene_biotype=protein_coding;gene_synonym=SC2E1.20;locus_tag=SCO5603
NC_003888.3	RefSeq	CDS	6104868	6106493	.	+	0	ID=cds5553;Parent=gene5664;Dbxref=Genbank:NP_629737.1,GeneID:1101044;Name=NP_629737.1;Note=SC2E1.20%2C unknown ATP/GTP binding protein%2C len: 541 aa%3B similar to hypothetical proteins from many organisms e.g. YIFB_ECOLI (516 aa)%2C fasta scores%3B opt: 356 z-score: 935.9 E(): 0%2C 37.0%25 identity in 513 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC2E1.20;product=hypothetical protein;protein_id=NP_629737.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6105594	6105617	.	+	.	ID=id7305;Dbxref=GeneID:1101044;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2E1.20
NC_003888.3	RefSeq	gene	6106490	6107638	.	+	.	ID=gene5665;Dbxref=GeneID:1101045;Name=SC2E1.21;gbkey=Gene;gene=SC2E1.21;gene_biotype=protein_coding;gene_synonym=SC2E1.21;locus_tag=SCO5604
NC_003888.3	RefSeq	CDS	6106490	6107638	.	+	0	ID=cds5554;Parent=gene5665;Dbxref=Genbank:NP_629738.1,GeneID:1101045;Name=NP_629738.1;Note=SC2E1.21%2C unknown%2C len: 382 aa%3B N-terminus is Gly-rich%2C C-terminus is similar to the N-terminus of several hypothetical proteins e.g. SW:SMF_ECOLI SMF protein (374 aa)%2C fasta scores%3B opt: 402 z-score: 277.5 E(): 3.2e-08%2C 40.7%25 identity in 194 aa overlap. This ORF appears to be interrupted by the following prophage at around aa 360%2C and to continue as the last part of SC2E1.37. The similarity to the M. tuberculosis hypothetical protein SW:YX27_MYCTU MTCY274.27c (389 aa) (fasta scores%3B opt: 603 z-score: 511.5 E(): 3e-21%2C 46.8%25 identity in 267 aa overlap) stops at that position and restarts in SC2E1.37. Alternative start site at aa 118 sugested by positional base preference;gbkey=CDS;gene=SC2E1.21;product=hypothetical protein;protein_id=NP_629738.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6107567	6120382	.	+	.	ID=id7306;Note=probable prophage: has low GC (approx 66-68%25)%2C and some ORF's with similarities to bacteriophage ORF's. The ORF SC2E1.21 appears to have been interrupted by this prophage and apparently continues as the last part of SC2E1.37;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6107817	6108128	.	+	.	ID=gene5666;Dbxref=GeneID:1101046;Name=SC2E1.22;gbkey=Gene;gene=SC2E1.22;gene_biotype=protein_coding;gene_synonym=SC2E1.22;locus_tag=SCO5605
NC_003888.3	RefSeq	CDS	6107817	6108128	.	+	0	ID=cds5555;Parent=gene5666;Dbxref=Genbank:NP_629739.1,GeneID:1101046;Name=NP_629739.1;Note=SC2E1.22%2C unknown prophage gene%2C len: 103 aa;gbkey=CDS;gene=SC2E1.22;product=hypothetical protein;protein_id=NP_629739.1;transl_table=11
NC_003888.3	RefSeq	gene	6108125	6108415	.	-	.	ID=gene5667;Dbxref=GeneID:1101047;Name=SC2E1.23c;gbkey=Gene;gene=SC2E1.23c;gene_biotype=protein_coding;gene_synonym=SC2E1.23c;locus_tag=SCO5606
NC_003888.3	RefSeq	CDS	6108125	6108415	.	-	0	ID=cds5556;Parent=gene5667;Dbxref=Genbank:NP_629740.1,GeneID:1101047;Name=NP_629740.1;Note=SC2E1.23c%2C unknown prophage gene%2C len: 96 aa;gbkey=CDS;gene=SC2E1.23c;product=hypothetical protein;protein_id=NP_629740.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6108458	6108462	.	+	.	ID=id7307;Note=possible RBS upstream of SC2E1.23;gbkey=RBS
NC_003888.3	RefSeq	gene	6108466	6108660	.	+	.	ID=gene5668;Dbxref=GeneID:1101048;Name=SC2E1.24;gbkey=Gene;gene=SC2E1.24;gene_biotype=protein_coding;gene_synonym=SC2E1.24;locus_tag=SCO5607
NC_003888.3	RefSeq	CDS	6108466	6108660	.	+	0	ID=cds5557;Parent=gene5668;Dbxref=Genbank:NP_629741.1,GeneID:1101048;Name=NP_629741.1;Note=SC2E1.24%2C possible prophage transcriptional regulator%2C len:64 aa%3B similar to the N-terminus of several regulatory proteins e.g. Streptomyces phaeochromogenes plasmid pJV1 TR:Q54677 (EMBL:U23762) traR (245 aa)%2C fasta scores%3B opt:137 z-score: 268.5 E(): 1e-07%2C 39.3%25 identity in 61 aa overlap. Contains Pfam match to entry gntR PF00392%2C Bacterial regulatory proteins%2C gntR family%2C score 43.92;gbkey=CDS;gene=SC2E1.24;product=transcriptional regulator;protein_id=NP_629741.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6108466	6108645	.	+	.	ID=id7308;Dbxref=GeneID:1101048;Note=Pfam match to entry gntR PF00392%2C Bacterial regulatory proteins%2C gntR family%2C score 43.92;gbkey=misc_feature;gene=SC2E1.24
NC_003888.3	RefSeq	ribosome_entry_site	6108746	6108750	.	+	.	ID=id7309;Note=possible RBS upstream of SC2E1.25;gbkey=RBS
NC_003888.3	RefSeq	gene	6108755	6109456	.	+	.	ID=gene5669;Dbxref=GeneID:1101049;Name=SC2E1.25;gbkey=Gene;gene=SC2E1.25;gene_biotype=protein_coding;gene_synonym=SC2E1.25;locus_tag=SCO5608
NC_003888.3	RefSeq	CDS	6108755	6109456	.	+	0	ID=cds5558;Parent=gene5669;Dbxref=Genbank:NP_629742.1,GeneID:1101049;Name=NP_629742.1;Note=SC2E1.25%2C unknown prophage gene%2C len: 233 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC2E1.25;product=hypothetical protein;protein_id=NP_629742.1;transl_table=11
NC_003888.3	RefSeq	gene	6109515	6109712	.	-	.	ID=gene5670;Dbxref=GeneID:1101050;Name=SC2E1.26c;gbkey=Gene;gene=SC2E1.26c;gene_biotype=protein_coding;gene_synonym=SC2E1.26c;locus_tag=SCO5609
NC_003888.3	RefSeq	CDS	6109515	6109712	.	-	0	ID=cds5559;Parent=gene5670;Dbxref=Genbank:NP_629743.1,GeneID:1101050;Name=NP_629743.1;Note=SC2E1.26c%2C unknown prophage gene%2C len: 65 aa%3B very hydrophobic. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC2E1.26c;product=hypothetical protein;protein_id=NP_629743.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6109723	6109726	.	-	.	ID=id7310;Note=possible RBS upstream of SC2E1.26c;gbkey=RBS
NC_003888.3	RefSeq	gene	6110051	6110413	.	-	.	ID=gene5671;Dbxref=GeneID:1101051;Name=SC2E1.27c;gbkey=Gene;gene=SC2E1.27c;gene_biotype=protein_coding;gene_synonym=SC2E1.27c;locus_tag=SCO5610
NC_003888.3	RefSeq	CDS	6110051	6110413	.	-	0	ID=cds5560;Parent=gene5671;Dbxref=Genbank:NP_629744.1,GeneID:1101051;Name=NP_629744.1;Note=SC2E1.27c%2C unknown prophage gene%2C len: 120 aa%3B contains hydrophobic region near centre. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC2E1.27c;product=hypothetical protein;protein_id=NP_629744.1;transl_table=11
NC_003888.3	RefSeq	gene	6111177	6111392	.	+	.	ID=gene5672;Dbxref=GeneID:1101052;Name=SC2E1.28;gbkey=Gene;gene=SC2E1.28;gene_biotype=protein_coding;gene_synonym=SC2E1.28;locus_tag=SCO5611
NC_003888.3	RefSeq	CDS	6111177	6111392	.	+	0	ID=cds5561;Parent=gene5672;Dbxref=Genbank:NP_629745.1,GeneID:1101052;Name=NP_629745.1;Note=SC2E1.28%2C possible prophage transcriptional regulator%2C len: 71 aa%3B similar to the N-terminus of many e.g. TR:Q37946 Salmonella typhimurium bacteriophage L repressor protein C2 (220 aa)%2C fasta scores%3B opt: 127 z-score: 227.1 E():2e-05%2C 45.7%25 identity in 46 aa overlap. Contains probable helix-turn-helix motif at aa 21 to 42 (Score 1829%2C +5.42 SD);gbkey=CDS;gene=SC2E1.28;product=transcriptional regulator;protein_id=NP_629745.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6111542	6111547	.	+	.	ID=id7311;Note=possible RBS upstream of SC2E1.29;gbkey=RBS
NC_003888.3	RefSeq	gene	6111554	6113824	.	+	.	ID=gene5673;Dbxref=GeneID:1101053;Name=SC2E1.29;gbkey=Gene;gene=SC2E1.29;gene_biotype=protein_coding;gene_synonym=SC2E1.29;locus_tag=SCO5612
NC_003888.3	RefSeq	CDS	6111554	6113824	.	+	0	ID=cds5562;Parent=gene5673;Dbxref=Genbank:NP_629746.1,GeneID:1101053;Name=NP_629746.1;Note=SC2E1.29%2C unknown prophage ATP binding protein%2C len: 756 aa%3B some similarity to TR:Q38030 (EMBL:X76288) Streptomyces Bacteriophage phi-C31 early region ORF9 (519 aa)%2C fasta scores%3B opt: 360 z-score: 374.4 E(): 1.3e-13%2C 24.4%25 identity in 553 aa overlap%2C and to a prophage ORF from M. tuberculosis TR:O06608 (EMBL:Z95586) MTCY336.22 (471 aa)%2C fasta scores%3B opt: 655 z-score: 535.5 E(): 1.4e-22%2C 29.8%25 identity in 416 aa overlap. Contains 2x PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC2E1.29;product=ATP binding protein;protein_id=NP_629746.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6113036	6113059	.	+	.	ID=id7312;Dbxref=GeneID:1101053;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2E1.29
NC_003888.3	RefSeq	sequence_feature	6113693	6113716	.	+	.	ID=id7313;Dbxref=GeneID:1101053;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2E1.29
NC_003888.3	RefSeq	ribosome_entry_site	6114097	6114100	.	+	.	ID=id7314;Note=possible RBS upstream of SC2E1.30;gbkey=RBS
NC_003888.3	RefSeq	gene	6114108	6114659	.	+	.	ID=gene5674;Dbxref=GeneID:1101054;Name=SC2E1.30;gbkey=Gene;gene=SC2E1.30;gene_biotype=protein_coding;gene_synonym=SC2E1.30;locus_tag=SCO5613
NC_003888.3	RefSeq	CDS	6114108	6114659	.	+	0	ID=cds5563;Parent=gene5674;Dbxref=Genbank:NP_629747.1,GeneID:1101054;Name=NP_629747.1;Note=SC2E1.30%2C unknown prophage gene%2C len: 183 aa;gbkey=CDS;gene=SC2E1.30;product=hypothetical protein;protein_id=NP_629747.1;transl_table=11
NC_003888.3	RefSeq	gene	6115124	6115315	.	+	.	ID=gene5675;Dbxref=GeneID:1101055;Name=SC2E1.31;gbkey=Gene;gene=SC2E1.31;gene_biotype=protein_coding;gene_synonym=SC2E1.31;locus_tag=SCO5614
NC_003888.3	RefSeq	CDS	6115124	6115315	.	+	0	ID=cds5564;Parent=gene5675;Dbxref=Genbank:NP_629748.1,GeneID:1101055;Name=NP_629748.1;Note=SC2E1.31%2C possible prophage transcriptional regulator%2C len: 63 aa%3B similar to the N-terminus of many e.g. TR:E264367 (EMBL:X87420) Salmonella typhimurium bacteriophage ES18 gene C2 (216 aa)%2C fasta scores%3B opt: 133 z-score: 207.9E(): 0.00024%2C 35.8%25 identity in 53 aa overlap. Contains probable helix-turn-helix motif at aa 17 to 38 (Score 1786%2C +5.27 SD);gbkey=CDS;gene=SC2E1.31;product=transcriptional regulator;protein_id=NP_629748.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6115300	6115305	.	+	.	ID=id7315;Dbxref=GeneID:1101055;Note=possible RBS upstream of SC2E1.32;gbkey=RBS;gene=SC2E1.31
NC_003888.3	RefSeq	gene	6115312	6115662	.	+	.	ID=gene5676;Dbxref=GeneID:1101056;Name=SC2E1.32;gbkey=Gene;gene=SC2E1.32;gene_biotype=protein_coding;gene_synonym=SC2E1.32;locus_tag=SCO5615
NC_003888.3	RefSeq	CDS	6115312	6115662	.	+	0	ID=cds5565;Parent=gene5676;Dbxref=Genbank:NP_629749.1,GeneID:1101056;Name=NP_629749.1;Note=SC2E1.32%2C unknown prophage gene%2C len: 116 aa;gbkey=CDS;gene=SC2E1.32;product=hypothetical protein;protein_id=NP_629749.1;transl_table=11
NC_003888.3	RefSeq	gene	6115730	6116218	.	+	.	ID=gene5677;Dbxref=GeneID:1101057;Name=SC2E1.33;gbkey=Gene;gene=SC2E1.33;gene_biotype=protein_coding;gene_synonym=SC2E1.33;locus_tag=SCO5616
NC_003888.3	RefSeq	CDS	6115730	6116218	.	+	0	ID=cds5566;Parent=gene5677;Dbxref=Genbank:NP_629750.1,GeneID:1101057;Name=NP_629750.1;Note=SC2E1.33%2C unknown prophage gene%2C len: 162 aa%3B contains probable helix-turn-helix motif at aa 11 to 32 (Score 1192%2C +3.25 SD);gbkey=CDS;gene=SC2E1.33;product=hypothetical protein;protein_id=NP_629750.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6116190	6116195	.	+	.	ID=id7316;Dbxref=GeneID:1101057;Note=possible RBS upstream of SC2E1.34;gbkey=RBS;gene=SC2E1.33
NC_003888.3	RefSeq	gene	6116205	6116621	.	+	.	ID=gene5678;Dbxref=GeneID:1101058;Name=SC2E1.34;gbkey=Gene;gene=SC2E1.34;gene_biotype=protein_coding;gene_synonym=SC2E1.34;locus_tag=SCO5617
NC_003888.3	RefSeq	CDS	6116205	6116621	.	+	0	ID=cds5567;Parent=gene5678;Dbxref=Genbank:NP_629751.1,GeneID:1101058;Name=NP_629751.1;Note=SC2E1.34%2C unknown prophage gene%2C len: 138 aa;gbkey=CDS;gene=SC2E1.34;product=hypothetical protein;protein_id=NP_629751.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6117027	6117030	.	+	.	ID=id7317;Note=possible RBS upstream of SC2E1.35;gbkey=RBS
NC_003888.3	RefSeq	gene	6117039	6117482	.	+	.	ID=gene5679;Dbxref=GeneID:1101059;Name=SC2E1.35;gbkey=Gene;gene=SC2E1.35;gene_biotype=protein_coding;gene_synonym=SC2E1.35;locus_tag=SCO5618
NC_003888.3	RefSeq	CDS	6117039	6117482	.	+	0	ID=cds5568;Parent=gene5679;Dbxref=Genbank:NP_629752.1,GeneID:1101059;Name=NP_629752.1;Note=SC2E1.35%2C unknown prophage gene%2C len: 147 aa;gbkey=CDS;gene=SC2E1.35;product=hypothetical protein;protein_id=NP_629752.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6117783	6117786	.	+	.	ID=id7318;Note=possible RBS upstream of SC2E1.36;gbkey=RBS
NC_003888.3	RefSeq	gene	6117794	6118300	.	+	.	ID=gene5680;Dbxref=GeneID:1101060;Name=SC2E1.36;gbkey=Gene;gene=SC2E1.36;gene_biotype=protein_coding;gene_synonym=SC2E1.36;locus_tag=SCO5619
NC_003888.3	RefSeq	CDS	6117794	6118300	.	+	0	ID=cds5569;Parent=gene5680;Dbxref=Genbank:NP_629753.1,GeneID:1101060;Name=NP_629753.1;Note=SC2E1.36%2C unknown prophage gene%2C len: 168 aa;gbkey=CDS;gene=SC2E1.36;product=hypothetical protein;protein_id=NP_629753.1;transl_table=11
NC_003888.3	RefSeq	gene	6118370	6120760	.	+	.	ID=gene5681;Dbxref=GeneID:1101061;Name=SC2E1.37;gbkey=Gene;gene=SC2E1.37;gene_biotype=protein_coding;gene_synonym=SC2E1.37;locus_tag=SCO5620
NC_003888.3	RefSeq	CDS	6118370	6120760	.	+	0	ID=cds5570;Parent=gene5681;Dbxref=Genbank:NP_629754.1,GeneID:1101061;Name=NP_629754.1;Note=SC2E1.37%2C unknown prophage gene%2C len: 796 aa%3B shows very limited similarity to Rhodococcus opacus TR:G2935035 (EMBL:AF003948)  transposase homolog (242 aa)%2C fasta scores%3B opt: 215 z-score: 280.3 E(): 2.2e-08%2C 33.3%25 identity in 105 aa overlap%3B and similar to TR:O69933 (EMBL:AL023861) Streptomyces coelicolor DNA recombinase SC3C8.24%2C 672 aa%3B fasta scores: opt: 1276 Z-score: 1340.7 bits: 258.7 E(): 4.8e-67%3B 41.074%25 identity in 689 aa overlap. Contains PS00397 Site-specific recombinases active site and Pfam match to entry recombinase PF00239%2C Site-specific recombinases%2C score 36.16. The last part of this ORF (aa 672 onwards) appears to be a continuation of SC2E1.21%2C which was interrupted by the prophage%3B the similarities to YX27_MYCTU MTCY274.27c (389 aa) (fasta scores%3B opt: 246 z-score: 225.9 E(): 2.4e-05%2C 38.8%25 identity in 116 aa overlap) continue after aa 672. Contains probable coiled-coil from aa 449 to 505;gbkey=CDS;gene=SC2E1.37;product=recombinase;protein_id=NP_629754.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6118451	6118933	.	+	.	ID=id7319;Dbxref=GeneID:1101061;Note=Pfam match to entry recombinase PF00239%2C Site-specific recombinases%2C score 36.16;gbkey=misc_feature;gene=SC2E1.37
NC_003888.3	RefSeq	sequence_feature	6118457	6118483	.	+	.	ID=id7320;Dbxref=GeneID:1101061;Note=PS00397 Site-specific recombinases active site;gbkey=misc_feature;gene=SC2E1.37
NC_003888.3	RefSeq	gene	6121043	6121885	.	+	.	ID=gene5682;Dbxref=GeneID:1101062;Name=SC2E1.38;gbkey=Gene;gene=SC2E1.38;gene_biotype=protein_coding;gene_synonym=SC2E1.38,whiG;locus_tag=SCO5621
NC_003888.3	RefSeq	CDS	6121043	6121885	.	+	0	ID=cds5571;Parent=gene5682;Dbxref=Genbank:NP_629755.1,GeneID:1101062;Name=NP_629755.1;Note=involved in the initiation of sporulation and glycogen biosynthesis;gbkey=CDS;gene=SC2E1.38;product=RNA polymerase sigma factor WhiG;protein_id=NP_629755.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6121172	6121861	.	+	.	ID=id7321;Dbxref=GeneID:1101062;Note=Pfam match to entry sigma70 PF00140%2C Sigma-70 factors%2C score 342.03;gbkey=misc_feature;gene=SC2E1.38
NC_003888.3	RefSeq	sequence_feature	6121271	6121312	.	+	.	ID=id7322;Dbxref=GeneID:1101062;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=SC2E1.38
NC_003888.3	RefSeq	sequence_feature	6121775	6121855	.	+	.	ID=id7323;Dbxref=GeneID:1101062;Note=PS00716 Sigma-70 factors family signature 2;gbkey=misc_feature;gene=SC2E1.38
NC_003888.3	RefSeq	ribosome_entry_site	6121995	6121999	.	+	.	ID=id7324;Note=possible RBS upstream of SC2E1.39;gbkey=RBS
NC_003888.3	RefSeq	gene	6122014	6122571	.	+	.	ID=gene5683;Dbxref=GeneID:1101063;Name=SC2E1.39;gbkey=Gene;gene=SC2E1.39;gene_biotype=protein_coding;gene_synonym=SC2E1.39;locus_tag=SCO5622
NC_003888.3	RefSeq	CDS	6122014	6122571	.	+	0	ID=cds5572;Parent=gene5683;Dbxref=Genbank:NP_629756.1,GeneID:1101063;Name=NP_629756.1;Note=SC2E1.39%2C possible transcriptional regulator%2C len: 185 aa%3B equivalent to Streptomyces roseosporus TR:P72569 (EMBL:U58281) tetR homologue WhiR (179 aa) (86.6%25 identity in 179 aa overlap) and similar to several transcriptional regulators of the tetR family e.g. TR:E1247678 transcriptional regulator SC10A5.11 (S.coelicolor) (198 aa)%2C fasta scores%3B opt: 434 z-score: 720.5 E(): 6.8e-33%2C 41.5%25 identity in 171 aa overlap. Contains probable helix-turn-helix motif at aa 29 to 50 (Score 1618%2C +4.70 SD) and Pfam match to entry tetR PF00440%2C Bacterial regulatory proteins%2C tetR family%2C score 29.18;gbkey=CDS;gene=SC2E1.39;product=transcriptional regulator;protein_id=NP_629756.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6122047	6122187	.	+	.	ID=id7325;Dbxref=GeneID:1101063;Note=Pfam match to entry tetR PF00440%2C Bacterial regulatory proteins%2C tetR family%2C score 29.18;gbkey=misc_feature;gene=SC2E1.39
NC_003888.3	RefSeq	gene	6122525	6123205	.	-	.	ID=gene5684;Dbxref=GeneID:1101064;Name=SC2E1.40c;gbkey=Gene;gene=SC2E1.40c;gene_biotype=protein_coding;gene_synonym=SC2E1.40c;locus_tag=SCO5623
NC_003888.3	RefSeq	CDS	6122525	6123205	.	-	0	ID=cds5573;Parent=gene5684;Dbxref=Genbank:NP_629757.1,GeneID:1101064;Name=NP_629757.1;Note=SC2E1.40c%2C probable hypothetical protein%2C len: 226 aa%3B some similarity to two  M. tuberculosis proteins YX22_MYCTU MTCY274.22 (249 aa)%2C fasta scores%3B opt: 315 z-score: 268.8 E(): 9.7e-08%2C 40.7%25 identity in 145 aa overlap (also upstream of rpsB) and Y0GK_MYCTU MTCY13D12.20 (407 aa)%2C fasta scores%3B opt: 218 z-score: 176.1 E(): 0.014%2C 34.1%25 identity in 164 aa overlap. Contains probable N-terminal signal sequence.;gbkey=CDS;gene=SC2E1.40c;product=hypothetical protein;protein_id=NP_629757.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6122570	6126508	.	-	.	ID=id7326;Note=overlap with cosmid 6A9 (unfinished);gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6123212	6123215	.	-	.	ID=id7327;Note=possible RBS upstream of SC2E1.40c;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	6123303	6125465	.	+	.	ID=id7328;Note=97.4%25 match to AF034101 AF034101 Streptomyces coelicolor ribosomal protein S2 (rpsB) and elongation factor Ts (tsf) genes from 1 to 2154;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6123480	6123485	.	+	.	ID=id7329;Note=possible RBS upstream of rpsB;gbkey=RBS
NC_003888.3	RefSeq	gene	6123494	6124426	.	+	.	ID=gene5685;Dbxref=GeneID:1101065;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=SCO5624
NC_003888.3	RefSeq	CDS	6123494	6124426	.	+	0	ID=cds5574;Parent=gene5685;Dbxref=Genbank:NP_629758.1,GeneID:1101065;Name=NP_629758.1;Note=one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit;gbkey=CDS;gene=rpsB;product=30S ribosomal protein S2;protein_id=NP_629758.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6123509	6123544	.	+	.	ID=id7330;Dbxref=GeneID:1101065;Note=PS00962 Ribosomal protein S2 signature 1;gbkey=misc_feature;gene=rpsB
NC_003888.3	RefSeq	sequence_feature	6123518	6124171	.	+	.	ID=id7331;Dbxref=GeneID:1101065;Note=Pfam match to entry S2 PF00318%2C Ribosomal protein S2%2C score 304.89;gbkey=misc_feature;gene=rpsB
NC_003888.3	RefSeq	sequence_feature	6124007	6124051	.	+	.	ID=id7332;Dbxref=GeneID:1101065;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=rpsB
NC_003888.3	RefSeq	sequence_feature	6124286	6124402	.	+	.	ID=id7333;Dbxref=GeneID:1101065;Note=Pfam match to entry 60s_ribosomal PF00428%2C 60s Acidic ribosomal protein%2C score 24.36;gbkey=misc_feature;gene=rpsB
NC_003888.3	RefSeq	gene	6124521	6125357	.	+	.	ID=gene5686;Dbxref=GeneID:1101066;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=SCO5625
NC_003888.3	RefSeq	CDS	6124521	6125357	.	+	0	ID=cds5575;Parent=gene5686;Dbxref=Genbank:NP_629759.1,GeneID:1101066;Name=NP_629759.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=NP_629759.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6124554	6124601	.	+	.	ID=id7334;Dbxref=GeneID:1101066;Note=PS01126 Elongation factor Ts signature 1;gbkey=misc_feature;gene=tsf
NC_003888.3	RefSeq	ribosome_entry_site	6125550	6125553	.	+	.	ID=id7335;Note=possible RBS upstream of pyrH;gbkey=RBS
NC_003888.3	RefSeq	gene	6125563	6126324	.	+	.	ID=gene5687;Dbxref=GeneID:1101067;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=SCO5626
NC_003888.3	RefSeq	CDS	6125563	6126324	.	+	0	ID=cds5576;Parent=gene5687;Dbxref=Genbank:NP_629760.1,GeneID:1101067;Name=NP_629760.1;Note=Catalyzes the phosphorylation of UMP to UDP;gbkey=CDS;gene=pyrH;product=uridylate kinase;protein_id=NP_629760.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6126222	6126508	.	+	.	ID=id7336;Note=overlap with cosmid 2E1 from: 38676 to: 38962;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6126492	6126496	.	+	.	ID=id7337;Note=possible RBS upstream of frr;gbkey=RBS
NC_003888.3	RefSeq	gene	6126503	6127060	.	+	.	ID=gene5688;Dbxref=GeneID:1101068;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=SCO5627
NC_003888.3	RefSeq	CDS	6126503	6127060	.	+	0	ID=cds5577;Parent=gene5688;Dbxref=Genbank:NP_629761.1,GeneID:1101068;Name=NP_629761.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=NP_629761.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6127052	6127055	.	+	.	ID=id7338;Dbxref=GeneID:1101068;Note=possible RBS upstream of SC6A9.39c;gbkey=RBS;gene=frr
NC_003888.3	RefSeq	gene	6127060	6128235	.	+	.	ID=gene5689;Dbxref=GeneID:1101069;Name=SC6A9.39c;gbkey=Gene;gene=SC6A9.39c;gene_biotype=protein_coding;gene_synonym=SC6A9.39c;locus_tag=SCO5628
NC_003888.3	RefSeq	CDS	6127060	6128235	.	+	0	ID=cds5578;Parent=gene5689;Dbxref=Genbank:NP_629762.1,GeneID:1101069;Name=NP_629762.1;Note=SC6A9.39c%2C probable integral membrane protein%2C len: 391 aa%3B C-terminus is similar to many phosphatidate cytidylyltransferases e.g. SW:CDSA_ECOLI (EMBL:M11330) phosphatidate cytidylyltransferase (249 aa)%2C fasta scores%3B opt: 379 z-score: 384.3 E(): 3.6e-14%2C 38.8%25 identity in 196 aa overlap;gbkey=CDS;gene=SC6A9.39c;product=hypothetical protein;protein_id=NP_629762.1;transl_table=11
NC_003888.3	RefSeq	gene	6128360	6131020	.	-	.	ID=gene5690;Dbxref=GeneID:1101070;Name=SC6A9.38;gbkey=Gene;gene=SC6A9.38;gene_biotype=protein_coding;gene_synonym=SC6A9.38;locus_tag=SCO5629
NC_003888.3	RefSeq	CDS	6128360	6131020	.	-	0	ID=cds5579;Parent=gene5690;Dbxref=Genbank:NP_629763.1,GeneID:1101070;Name=NP_629763.1;Note=SC6A9.38%2C unknown ATP /GTP-binding protein%2C len: 886 aa%3B C-terminus contains 7 x 42 aa repeats with weak similarity to eukaryotic kinesin light chain 42 aa repeats e.g. KNLC_LOLPE kinesin light chain (klc) (571 aa)%2C fasta scores%3B opt: 302 z-score: 260.7 E(): 2.8e-07%2C 24.0%25 identity in 405 aa overlap. Contains PS00017 ATP/GTP- binding;gbkey=CDS;gene=SC6A9.38;product=ATP /GTP-binding protein;protein_id=NP_629763.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6128455	6129259	.	-	.	ID=id7339;Dbxref=GeneID:1101070;Note=7x 126 bp degnerate repeats;gbkey=repeat_region;gene=SC6A9.38
NC_003888.3	RefSeq	sequence_feature	6130355	6130378	.	-	.	ID=id7340;Dbxref=GeneID:1101070;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6A9.38
NC_003888.3	RefSeq	repeat_region	6131094	6131165	.	-	.	ID=id7341;Note=approx 4 x 19 bp degenerate repeats;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6131515	6132471	.	-	.	ID=id7342;Note=IS1648%3B identical to copy in cosmid 3C8. A possibly identical sequence is present in the S. coelicolor plasmid SCP2*%2C starting 0.4 kb clockwise from the unique EcoRI site (T. Kieser%2C personal communication);gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6131515	6131536	.	+	.	ID=id7343;Note=20 /22 bp inverted repeat at end of IS1648;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6131534	6132414	.	-	.	ID=gene5691;Dbxref=GeneID:1101071;Name=SC6A9.36;gbkey=Gene;gene=SC6A9.36;gene_biotype=pseudogene;gene_synonym=SC6A9.36,SC6A9.37;locus_tag=SCO5630;pseudo=true
NC_003888.3	RefSeq	sequence_feature	6131534	6132414	.	-	.	ID=id7344;Dbxref=GeneID:1101071;Note=SC6A9.37%2C probable IS1648 transposase%2C len: 152 aa%3B identical to SC3C8.16. Note that this CDS is probably expressed by frameshifting from the upstream ORF~SC6A9.36%2C probable IS1648 transposase%2C len: 141 aa%3B identical to SC3C8.15. Note that this CDS is probably expressed by frameshifting into the downstream ORF%3Btransposase;gbkey=misc_feature;gene=SC6A9.36
NC_003888.3	RefSeq	gene	6132437	6132679	.	-	.	ID=gene5692;Dbxref=GeneID:1101072;Name=SC6A9.35;gbkey=Gene;gene=SC6A9.35;gene_biotype=protein_coding;gene_synonym=SC6A9.35;locus_tag=SCO5632
NC_003888.3	RefSeq	CDS	6132437	6132679	.	-	0	ID=cds5580;Parent=gene5692;Dbxref=Genbank:NP_629764.1,GeneID:1101072;Name=NP_629764.1;Note=SC6A9.35%2C unknown%2C len: 80 aa;gbkey=CDS;gene=SC6A9.35;product=hypothetical protein;protein_id=NP_629764.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6132450	6132471	.	-	.	ID=id7345;Dbxref=GeneID:1101072;Note=20 /22 bp inverted repeat at end of IS1648;gbkey=repeat_region;gene=SC6A9.35
NC_003888.3	RefSeq	sequence_feature	6132683	6133683	.	-	.	ID=id7346;Note=AT rich region: approx 60%25 GC;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6132686	6132690	.	-	.	ID=id7347;Note=possible RBS upstream of SC6A9.35;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	6133439	6133494	.	-	.	ID=id7348;Note=hairpin loop with 25 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6133491	6135797	.	-	.	ID=gene5693;Dbxref=GeneID:1101073;Name=SC6A9.34;gbkey=Gene;gene=SC6A9.34;gene_biotype=protein_coding;gene_synonym=SC6A9.34;locus_tag=SCO5633
NC_003888.3	RefSeq	CDS	6133491	6135797	.	-	0	ID=cds5581;Parent=gene5693;Dbxref=Genbank:NP_629765.1,GeneID:1101073;Name=NP_629765.1;Note=SC6A9.34%2C probable fusion protein partially within integrated plasmid%2C len: 259 aa%3B N-terminus is almost identical to TR:E1286466 (EMBL:AJ005260) plasmid transfer protein traSA from Streptomyces ambofaciens plasmid pSAM2 (415 aa)%3B 96.2%25 identity in 369 aa overlap%2C and similar to other members of the spoIIIE /ftsK family e.g. SPI_STRAZ sporulation-regulatory protein (303 aa)%2C fasta scores%3B opt: 608 z-score: 904.0 E(): 0%2C 57.0%25 identity in 235 aa overlap. C-terminus is similar to many integrase /recombinases e.g. TR:O55248 (EMBL:AF030986) Mycobacterium phage MS6 integrase (372 aa)%2C fasta scores%3B opt: 184 z-score: 323.4 E(): 8.9e-11%2C 26.4%25 identity in 364 aa overlap. N-terminus contains TTA Leu codon%3B possible target for action of bldA and PS00017 ATP /GTP-binding%3D Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 40.60%2C E-value 3.5e-08;gbkey=CDS;gene=SC6A9.34;product=traSA:integrase fusion protein;protein_id=NP_629765.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6133533	6134195	.	-	.	ID=id7349;Dbxref=GeneID:1101073;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 40.60%2C E-value 3.5e-08;gbkey=misc_feature;gene=SC6A9.34
NC_003888.3	RefSeq	sequence_feature	6134584	6137863	.	-	.	ID=id7350;Note=Probable integrated plasmid%3B 95%25 identical to%2C but shorter than SAAJ5260 AJ005260 Streptomyces ambofaciens integrative element pSAM2 from 179 to 3471;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6135234	6135257	.	-	.	ID=id7351;Dbxref=GeneID:1101073;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6A9.34
NC_003888.3	RefSeq	sequence_feature	6135552	6135554	.	-	.	ID=id7352;Dbxref=GeneID:1101073;Note=TTA Leu codon%3B possible target for action of bldA;gbkey=misc_feature;gene=SC6A9.34
NC_003888.3	RefSeq	gene	6135554	6136151	.	-	.	ID=gene5694;Dbxref=GeneID:1101074;Name=SC6A9.32;gbkey=Gene;gene=SC6A9.32;gene_biotype=pseudogene;gene_synonym=SC6A9.32,SC6A9.33;locus_tag=SCO5634;pseudo=true
NC_003888.3	RefSeq	sequence_feature	6135554	6136151	.	-	.	ID=id7353;Dbxref=GeneID:1101074;Note=SC6A9.33%2C unknown (pseudogene)%2C len: 45 aa%3B almost identical to 3' end of TR:E1288124 (EMBL:AJ005260) Pra from Streptomyces ambofaciens plasmid pSAM2 (116 aa)%3B 97.8%25 identity in 45 aa overlap. Similarity continues from SC6A9.31 after frameshift. No error in the cosmid sequence can be found to account for this~SC6A9.32%2C unknown (pseudogene)%2C len: 68 aa%3B identical to 5' end of TR:E1288124 (EMBL:AJ005260) Pra from Streptomyces ambofaciens plasmid pSAM2 (116 aa). Similarity continues in SC6A9.32 after frameshift. No error in the cosmid sequence can be found to account for this%3Bhypothetical protein (pseudogene);gbkey=misc_feature;gene=SC6A9.32
NC_003888.3	RefSeq	ribosome_entry_site	6136161	6136165	.	-	.	ID=id7354;Note=possible TRBS upstream of SC6A9.32;gbkey=RBS
NC_003888.3	RefSeq	gene	6136289	6137068	.	-	.	ID=gene5695;Dbxref=GeneID:1101075;Name=korSA;gbkey=Gene;gene=korSA;gene_biotype=protein_coding;gene_synonym=korSA,SC6A9.31;locus_tag=SCO5636
NC_003888.3	RefSeq	CDS	6136289	6137068	.	-	0	ID=cds5582;Parent=gene5695;Dbxref=Genbank:NP_629766.1,GeneID:1101075;Name=NP_629766.1;Note=SC6A9.31%2C korSA%2C transcriptional regulator%2C len: 259 aa%3B almost identical to TR:E1286465 (EMBL:AJ005260) KorSA from Streptomyces ambofaciens plasmid pSAM2 (259 aa)%3B 98.5%25 identity in 259 aa overlap and similar to many members of the gntR family e.g. KORA_STRLI KorA protein (241 aa)%2C fasta scores%3B opt: 187 z-score: 247.3 E(): 1.6e-06%2C 26.7%25 identity in 240 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 61.80%2C E-value 1.6e-17;gbkey=CDS;gene=korSA;product=transcriptional regulator;protein_id=NP_629766.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6136841	6137020	.	-	.	ID=id7355;Dbxref=GeneID:1101075;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 61.80%2C E-value 1.6e-17;gbkey=misc_feature;gene=korSA
NC_003888.3	RefSeq	ribosome_entry_site	6137081	6137086	.	-	.	ID=id7356;Note=possible RBS upstream of korSA;gbkey=RBS
NC_003888.3	RefSeq	gene	6137156	6137551	.	+	.	ID=gene5696;Dbxref=GeneID:1101076;Name=SC6A9.30c;gbkey=Gene;gene=SC6A9.30c;gene_biotype=protein_coding;gene_synonym=SC6A9.30c;locus_tag=SCO5637
NC_003888.3	RefSeq	CDS	6137156	6137551	.	+	0	ID=cds5583;Parent=gene5696;Dbxref=Genbank:NP_629767.1,GeneID:1101076;Name=NP_629767.1;Note=SC6A9.30c%2C mutT-like protein%2C len: 131 aa%3B almost identical to TR:E1286464 (EMBL:AJ005260) ORF131 from Streptomyces ambofaciens plasmid pSAM2 (131 aa)%3B 96.2%25 identity in 131 aa overlap%2C and similar to e.g. MUTT_PROVU mutator mutt protein (7%2C8-dihydro-8-oxoguanine-triphosphatase) (112 aa)%2C fasta scores%3B opt: 128 z-score: 217.1 E(): 7.4e-05%2C 41.8%25 identity in 55 aa overlap. Contains PS00893 mutT domain signature and Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 58.30%2C E-value 3e-15;gbkey=CDS;gene=SC6A9.30c;product=mutT-like protein;protein_id=NP_629767.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6137180	6137296	.	+	.	ID=id7357;Dbxref=GeneID:1101076;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 58.30%2C E-value 3e-15;gbkey=misc_feature;gene=SC6A9.30c
NC_003888.3	RefSeq	sequence_feature	6137228	6137287	.	+	.	ID=id7358;Dbxref=GeneID:1101076;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SC6A9.30c
NC_003888.3	RefSeq	gene	6137881	6138768	.	-	.	ID=gene5697;Dbxref=GeneID:1101077;Name=SC6A9.29;gbkey=Gene;gene=SC6A9.29;gene_biotype=protein_coding;gene_synonym=SC6A9.29;locus_tag=SCO5638
NC_003888.3	RefSeq	CDS	6137881	6138768	.	-	0	ID=cds5584;Parent=gene5697;Dbxref=Genbank:NP_629768.1,GeneID:1101077;Name=NP_629768.1;Note=SC6A9.29%2C probable integral membrane protein%2C len: 295 aa%3B this ORF has atypically low GC bias in FramePlot;gbkey=CDS;gene=SC6A9.29;product=hypothetical protein;protein_id=NP_629768.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6137883	6139883	.	-	.	ID=id7359;Note=AT rich region: approx 53%25 GC;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6138765	6139295	.	-	.	ID=gene5698;Dbxref=GeneID:1101078;Name=SC6A9.28;gbkey=Gene;gene=SC6A9.28;gene_biotype=protein_coding;gene_synonym=SC6A9.28;locus_tag=SCO5639
NC_003888.3	RefSeq	CDS	6138765	6139295	.	-	0	ID=cds5585;Parent=gene5698;Dbxref=Genbank:NP_629769.1,GeneID:1101078;Name=NP_629769.1;Note=SC6A9.28%2C unknown%2C len: 176 aa%3B this ORF has atypically low GC bias in FramePlot;gbkey=CDS;gene=SC6A9.28;product=hypothetical protein;protein_id=NP_629769.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6139302	6139306	.	-	.	ID=id7360;Note=possible RBS upstream of SC6A9.28;gbkey=RBS
NC_003888.3	RefSeq	gene	6139402	6139869	.	-	.	ID=gene5699;Dbxref=GeneID:1101079;Name=SC6A9.27;gbkey=Gene;gene=SC6A9.27;gene_biotype=protein_coding;gene_synonym=SC6A9.27;locus_tag=SCO5640
NC_003888.3	RefSeq	CDS	6139402	6139869	.	-	0	ID=cds5586;Parent=gene5699;Dbxref=Genbank:NP_629770.1,GeneID:1101079;Name=NP_629770.1;Note=SC6A9.27%2C unknown%2C len: 155 aa%3B this ORF has atypically low GC bias in FramePlot;gbkey=CDS;gene=SC6A9.27;product=hypothetical protein;protein_id=NP_629770.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6139789	6139794	.	-	.	ID=id7361;Dbxref=GeneID:1101079;Note=DraI site: TTTAAA;gbkey=misc_feature;gene=SC6A9.27
NC_003888.3	RefSeq	ribosome_entry_site	6139882	6139886	.	-	.	ID=id7362;Note=possible RBS upstream of SC6A9.27;gbkey=RBS
NC_003888.3	RefSeq	repeat_region	6139887	6140956	.	-	.	ID=id7363;Note=probable insertion element IS1649%2C inserted into AT-rich region;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6139887	6140843	.	-	.	ID=gene5700;Dbxref=GeneID:1101080;Name=SC6A9.26;gbkey=Gene;gene=SC6A9.26;gene_biotype=protein_coding;gene_synonym=SC6A9.26;locus_tag=SCO5641
NC_003888.3	RefSeq	CDS	6139887	6140843	.	-	0	ID=cds5587;Parent=gene5700;Dbxref=Genbank:NP_629771.1,GeneID:1101080;Name=NP_629771.1;Note=SC6A9.26%2C probable transposase for IS1649%2C len: 318 aa%3B similar to many e.g. Corynebacterium striatum TR:O30997 (EMBL:AF024666) transposase TNP5564 (329 aa)%2C fasta scores%3B opt: 589 z-score: 1572.9 E(): 0%2C 50.0%25 identity in 330 aa overlap. Contains probable helix-turn-helix motif at aa 26-47 (Score 1176%2C +3.19 SD);gbkey=CDS;gene=SC6A9.26;product=transposase;protein_id=NP_629771.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6139887	6139914	.	+	.	ID=id7364;Note=22 /27 bp inverted repeat at end of IS1649;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6140819	6141583	.	-	.	ID=gene5701;Dbxref=GeneID:1101081;Name=SC6A9.25;gbkey=Gene;gene=SC6A9.25;gene_biotype=protein_coding;gene_synonym=SC6A9.25;locus_tag=SCO5642
NC_003888.3	RefSeq	CDS	6140819	6141583	.	-	0	ID=cds5588;Parent=gene5701;Dbxref=Genbank:NP_629772.1,GeneID:1101081;Name=NP_629772.1;Note=SC6A9.25%2C unknown%2C len: 254 aa%3B this ORF has atypically low GC bias in FramePlot;gbkey=CDS;gene=SC6A9.25;product=hypothetical protein;protein_id=NP_629772.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6140849	6140854	.	-	.	ID=id7365;Dbxref=GeneID:1101081;Note=possible RBS upstream of SC6A9.26;gbkey=RBS;gene=SC6A9.25
NC_003888.3	RefSeq	sequence_feature	6140883	6141683	.	-	.	ID=id7366;Note=AT rich region: approx 55%25 GC;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	6140929	6140956	.	-	.	ID=id7367;Dbxref=GeneID:1101081;Note=22 /27 bp inverted repeat at end of IS1649;gbkey=repeat_region;gene=SC6A9.25
NC_003888.3	RefSeq	gene	6141650	6142177	.	-	.	ID=gene5702;Dbxref=GeneID:1101082;Name=SC6A9.24;gbkey=Gene;gene=SC6A9.24;gene_biotype=protein_coding;gene_synonym=SC6A9.24;locus_tag=SCO5643
NC_003888.3	RefSeq	CDS	6141650	6142177	.	-	0	ID=cds5589;Parent=gene5702;Dbxref=Genbank:NP_629773.1,GeneID:1101082;Name=NP_629773.1;Note=SC6A9.24%2C questionable ORF%2C len: 175 aa%3B this ORF has atypically low GC bias in FramePlot;gbkey=CDS;gene=SC6A9.24;product=hypothetical protein;protein_id=NP_629773.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6142246	6142250	.	+	.	ID=id7368;Note=possible RBS upstream of SC6A9.23c;gbkey=RBS
NC_003888.3	RefSeq	gene	6142261	6142887	.	+	.	ID=gene5703;Dbxref=GeneID:1101083;Name=SC6A9.23c;gbkey=Gene;gene=SC6A9.23c;gene_biotype=protein_coding;gene_synonym=SC6A9.23c;locus_tag=SCO5644
NC_003888.3	RefSeq	CDS	6142261	6142887	.	+	0	ID=cds5590;Parent=gene5703;Dbxref=Genbank:NP_629774.1,GeneID:1101083;Name=NP_629774.1;Note=SC6A9.23c%2C unknown%2C len: 208 aa%3B this ORF has atypically low GC bias in FramePlot;gbkey=CDS;gene=SC6A9.23c;product=hypothetical protein;protein_id=NP_629774.1;transl_table=11
NC_003888.3	RefSeq	gene	6143019	6144125	.	+	.	ID=gene5704;Dbxref=GeneID:1101084;Name=SC6A9.22c;gbkey=Gene;gene=SC6A9.22c;gene_biotype=protein_coding;gene_synonym=SC6A9.22c;locus_tag=SCO5645
NC_003888.3	RefSeq	CDS	6143019	6144125	.	+	0	ID=cds5591;Parent=gene5704;Dbxref=Genbank:NP_629775.1,GeneID:1101084;Name=NP_629775.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;gene=SC6A9.22c;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=NP_629775.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6144337	6144342	.	+	.	ID=id7369;Note=possible RBS upstream of SC6A9.21c;gbkey=RBS
NC_003888.3	RefSeq	gene	6144349	6145470	.	+	.	ID=gene5705;Dbxref=GeneID:1101085;Name=SC6A9.21c;gbkey=Gene;gene=SC6A9.21c;gene_biotype=protein_coding;gene_synonym=SC6A9.21c;locus_tag=SCO5646
NC_003888.3	RefSeq	CDS	6144349	6145470	.	+	0	ID=cds5592;Parent=gene5705;Dbxref=Genbank:NP_629776.1,GeneID:1101085;Name=NP_629776.1;Note=SC6A9.21c%2C probable solute binding lipoprotein%2C len: 373 aa%3B similar to e.g. TBPA_ECOLI thiamin-binding periplasmic protein (327 aa)%2C fasta scores%3B opt: 220 z-score: 423.3 E(): 2.4e-16%2C 28.4%25 identity in 327 aa overlap. Contains N-terminla signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC6A9.21c;product=solute binding lipoprotein;protein_id=NP_629776.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6144415	6144447	.	+	.	ID=id7370;Dbxref=GeneID:1101085;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6A9.21c
NC_003888.3	RefSeq	gene	6145467	6147128	.	+	.	ID=gene5706;Dbxref=GeneID:1101086;Name=SC6A9.20c;gbkey=Gene;gene=SC6A9.20c;gene_biotype=protein_coding;gene_synonym=SC6A9.20c;locus_tag=SCO5647
NC_003888.3	RefSeq	CDS	6145467	6147128	.	+	0	ID=cds5593;Parent=gene5706;Dbxref=Genbank:NP_629777.1,GeneID:1101086;Name=NP_629777.1;Note=SC6A9.20c%2C probable ABC transporter integral membrane protein%2C len: 553 aa%3B similar to many e.g. Y4FN_RHISN probable ABC transporter permease (569 aa)%2C fasta scores%3B opt: 296 z-score: 555.5 E(): 1e-23%2C 25.4%25 identity in 563 aa overlap. Contains 2x Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C scores 40.70%2C E-value 3.2e-08 and 46.50%2C E-value 6.1e-10;gbkey=CDS;gene=SC6A9.20c;product=ABC transporter;protein_id=NP_629777.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6145965	6146186	.	+	.	ID=id7371;Dbxref=GeneID:1101086;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 46.50%2C E-value 6.1e-10;gbkey=misc_feature;gene=SC6A9.20c
NC_003888.3	RefSeq	sequence_feature	6146787	6147008	.	+	.	ID=id7372;Dbxref=GeneID:1101086;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 40.70%2C E-value 3.2e-08;gbkey=misc_feature;gene=SC6A9.20c
NC_003888.3	RefSeq	ribosome_entry_site	6147119	6147122	.	+	.	ID=id7373;Dbxref=GeneID:1101086;Note=possible RBS upstream of SC6A9.19c;gbkey=RBS;gene=SC6A9.20c
NC_003888.3	RefSeq	gene	6147131	6148177	.	+	.	ID=gene5707;Dbxref=GeneID:1101087;Name=SC6A9.19c;gbkey=Gene;gene=SC6A9.19c;gene_biotype=protein_coding;gene_synonym=SC6A9.19c;locus_tag=SCO5648
NC_003888.3	RefSeq	CDS	6147131	6148177	.	+	0	ID=cds5594;Parent=gene5707;Dbxref=Genbank:NP_629778.1,GeneID:1101087;Name=NP_629778.1;Note=SC6A9.19c%2C probable ABC transporter ATP binding protein%2C len: 348 aa%3B similar to many e.g. POTA_ECOLI spermidine /putrescine transport ATP-binding protein (378 aa)%2C fasta scores%3B opt: 715 z-score: 832.8 E(): 0%2C 42.5%25 identity in 308 aa overlap. Contains PS00017 ATP /GTP-binding%3D transporters family signature and Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 226.00%2C E-value 5.5e-64;gbkey=CDS;gene=SC6A9.19c;product=ABC transporter ATP-binding protein;protein_id=NP_629778.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6147221	6147766	.	+	.	ID=id7374;Dbxref=GeneID:1101087;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 226.00%2C E-value 5.5e-64;gbkey=misc_feature;gene=SC6A9.19c
NC_003888.3	RefSeq	sequence_feature	6147242	6147265	.	+	.	ID=id7375;Dbxref=GeneID:1101087;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6A9.19c
NC_003888.3	RefSeq	sequence_feature	6147536	6147580	.	+	.	ID=id7376;Dbxref=GeneID:1101087;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC6A9.19c
NC_003888.3	RefSeq	gene	6148202	6149002	.	+	.	ID=gene5708;Dbxref=GeneID:1101088;Name=SC6A9.18c;gbkey=Gene;gene=SC6A9.18c;gene_biotype=protein_coding;gene_synonym=SC6A9.18c;locus_tag=SCO5649
NC_003888.3	RefSeq	CDS	6148202	6149002	.	+	0	ID=cds5595;Parent=gene5708;Dbxref=Genbank:NP_629779.1,GeneID:1101088;Name=NP_629779.1;Note=SC6A9.18c%2C unknown%2C len: 266 aa%3B similar to M. tuberculosis hypothetical protein TR:O07256 (EMBL:Z96800) MTCY63.37 (261 aa)%2C fasta scores%3B opt: 508 z-score: 606.3 E(): 1.6e-26%2C 36.7%25 identity in 251 aa overlap;gbkey=CDS;gene=SC6A9.18c;product=hypothetical protein;protein_id=NP_629779.1;transl_table=11
NC_003888.3	RefSeq	gene	6149064	6149768	.	-	.	ID=gene5709;Dbxref=GeneID:1101089;Name=SC6A9.17;gbkey=Gene;gene=SC6A9.17;gene_biotype=protein_coding;gene_synonym=SC6A9.17;locus_tag=SCO5650
NC_003888.3	RefSeq	CDS	6149064	6149768	.	-	0	ID=cds5596;Parent=gene5709;Dbxref=Genbank:NP_629780.1,GeneID:1101089;Name=NP_629780.1;Note=SC6A9.17%2C possible membrane protein%2C len: 234 aa. Contains possible hydrpphobic membrane spanning regions;gbkey=CDS;gene=SC6A9.17;product=hypothetical protein;protein_id=NP_629780.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6149774	6149778	.	-	.	ID=id7377;Note=possible RBS upstream of SC6A9.17;gbkey=RBS
NC_003888.3	RefSeq	gene	6149925	6151109	.	-	.	ID=gene5710;Dbxref=GeneID:1101090;Name=SC6A9.16;gbkey=Gene;gene=SC6A9.16;gene_biotype=protein_coding;gene_synonym=SC6A9.16;locus_tag=SCO5651
NC_003888.3	RefSeq	CDS	6149925	6151109	.	-	0	ID=cds5597;Parent=gene5710;Dbxref=Genbank:NP_629781.1,GeneID:1101090;Name=NP_629781.1;Note=SC6A9.16%2C unknown%2C len: 394 aa;gbkey=CDS;gene=SC6A9.16;product=hypothetical protein;protein_id=NP_629781.1;transl_table=11
NC_003888.3	RefSeq	gene	6151136	6151543	.	-	.	ID=gene5711;Dbxref=GeneID:1101091;Name=SC6A9.15;gbkey=Gene;gene=SC6A9.15;gene_biotype=protein_coding;gene_synonym=SC6A9.15;locus_tag=SCO5652
NC_003888.3	RefSeq	CDS	6151136	6151543	.	-	0	ID=cds5598;Parent=gene5711;Dbxref=Genbank:NP_629782.1,GeneID:1101091;Name=NP_629782.1;Note=SC6A9.15%2C conserved hypothetical protein%2C len: 135 aa%3B similar to TR:Q98D71 (EMBL:AP003005) hypothetical protein from Rhizobium loti (134 aa) fasta scores%3B opt: 401%2C Z-score: 482.3%2C E(): 3.1e-19%2C 46.212%25 identity (46.565%25 ungapped) in 132 aa overlap.;gbkey=CDS;gene=SC6A9.15;product=hypothetical protein;protein_id=NP_629782.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6151548	6151551	.	-	.	ID=id7378;Note=possible RBS upstream of SC6A9.15;gbkey=RBS
NC_003888.3	RefSeq	gene	6151649	6153109	.	-	.	ID=gene5712;Dbxref=GeneID:1101092;Name=SC6A9.14;gbkey=Gene;gene=SC6A9.14;gene_biotype=protein_coding;gene_synonym=SC6A9.14;locus_tag=SCO5653
NC_003888.3	RefSeq	CDS	6151649	6153109	.	-	0	ID=cds5599;Parent=gene5712;Dbxref=Genbank:NP_629783.1,GeneID:1101092;Name=NP_629783.1;Note=SC6A9.14%2C probable integral membrane protein%2C len: 486 aa%3B contains Pro- Ala- rich central region;gbkey=CDS;gene=SC6A9.14;product=hypothetical protein;protein_id=NP_629783.1;transl_table=11
NC_003888.3	RefSeq	gene	6153091	6153867	.	-	.	ID=gene5713;Dbxref=GeneID:1101093;Name=SC6A9.13;gbkey=Gene;gene=SC6A9.13;gene_biotype=protein_coding;gene_synonym=SC6A9.13;locus_tag=SCO5654
NC_003888.3	RefSeq	CDS	6153091	6153867	.	-	0	ID=cds5600;Parent=gene5713;Dbxref=Genbank:NP_629784.1,GeneID:1101093;Name=NP_629784.1;Note=SC6A9.13%2C probable ABC transporter ATP-binding protein%2C len: 258 aa%3B similar to many e.g. YBBA_ECOLI hypothetical ABC transporter ATP-binding protein (228 aa)%2C fasta scores%3B opt: 462 z-score: 578.7 E(): 5.3e-25%2C 40.4%25 identity in 198 aa overlap. Contains PS00017 ATP /GTP-binding%3D PF00005 ABC_tran%2C ABC transporters%2C score 173.20%2C E-value 4.2e-48;gbkey=CDS;gene=SC6A9.13;product=ABC transporter ATP-binding protein;protein_id=NP_629784.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6153202	6153762	.	-	.	ID=id7379;Dbxref=GeneID:1101093;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 173.20%2C E-value 4.2e-48;gbkey=misc_feature;gene=SC6A9.13
NC_003888.3	RefSeq	sequence_feature	6153718	6153741	.	-	.	ID=id7380;Dbxref=GeneID:1101093;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6A9.13
NC_003888.3	RefSeq	ribosome_entry_site	6153876	6153880	.	-	.	ID=id7381;Note=possible RBS upstream of SC6A9.13;gbkey=RBS
NC_003888.3	RefSeq	gene	6154073	6155446	.	-	.	ID=gene5714;Dbxref=GeneID:1101094;Name=SC6A9.12;gbkey=Gene;gene=SC6A9.12;gene_biotype=protein_coding;gene_synonym=SC6A9.12;locus_tag=SCO5655
NC_003888.3	RefSeq	CDS	6154073	6155446	.	-	0	ID=cds5601;Parent=gene5714;Dbxref=Genbank:NP_629785.1,GeneID:1101094;Name=NP_629785.1;Note=SC6A9.12%2C probable aminotransferase%2C len: 457 aa%3B similar to many e.g. BIOA_BACSU adenosylmethionine-8-amino-7-oxononanoate aminotransferase (448 aa)%2C fasta scores%3B opt: 895 z-score: 881.6 E(): 0%2C 35.6%25 identity in 449 aa overlap. Also highly similar to M. tuberculosis aminotransferase TR:O53379 (EMBL:AL021841) MTV016.29%3B 70.3%25 identity in 438 aa overlap. Contains Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 355.70%2C E-value 3.5e-123;gbkey=CDS;gene=SC6A9.12;product=hypothetical protein;protein_id=NP_629785.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6154151	6155329	.	-	.	ID=id7382;Dbxref=GeneID:1101094;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 355.70%2C E-value 3.5e-123;gbkey=misc_feature;gene=SC6A9.12
NC_003888.3	RefSeq	gene	6155449	6155949	.	-	.	ID=gene5715;Dbxref=GeneID:1101095;Name=SC6A9.11;gbkey=Gene;gene=SC6A9.11;gene_biotype=protein_coding;gene_synonym=SC6A9.11;locus_tag=SCO5656
NC_003888.3	RefSeq	CDS	6155449	6155949	.	-	0	ID=cds5602;Parent=gene5715;Dbxref=Genbank:NP_629786.1,GeneID:1101095;Name=NP_629786.1;Note=SC6A9.11%2C probable transcriptional regulatory protein%2C len: 166 aa%3B similar to many members of the asnC family e.g. LRP_ECOLI leucine-responsive regulatory protein (164 aa)%2C fasta scores%3B opt: 190 z-score: 294.3 E(): 3.7e-09%2C 27.6%25 identity in 156 aa overlap. Contains PS00519 Bacterial regulatory proteins%2C asnC family signature and probable helix-turn-helix motif at aa 39-60 (Score 1545%2C +4.45 SD);gbkey=CDS;gene=SC6A9.11;product=transcriptional regulator;protein_id=NP_629786.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6155755	6155835	.	-	.	ID=id7383;Dbxref=GeneID:1101095;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature;gbkey=misc_feature;gene=SC6A9.11
NC_003888.3	RefSeq	ribosome_entry_site	6156118	6156122	.	+	.	ID=id7384;Note=possible RBS upstream of SC6A9.10c;gbkey=RBS
NC_003888.3	RefSeq	gene	6156130	6157569	.	+	.	ID=gene5716;Dbxref=GeneID:1101096;Name=SC6A9.10c;gbkey=Gene;gene=SC6A9.10c;gene_biotype=protein_coding;gene_synonym=SC6A9.10c;locus_tag=SCO5657
NC_003888.3	RefSeq	CDS	6156130	6157569	.	+	0	ID=cds5603;Parent=gene5716;Dbxref=Genbank:NP_629787.1,GeneID:1101096;Name=NP_629787.1;Note=SC6A9.10c%2C probable aldehyde dehydrogenase%2C len: 479 aa%3B similar to many e.g. DHAB_BACSU betaine aldehyde dehydrogenase (EC 1.2.1.8) (490 aa)%2C fasta scores%3B opt: 1131 z-score: 1242.7 E(): 0%2C 39.2%25 identity in 472 aa overlap. Contains PS00687 Aldehyde dehydrogenases glutamic acid active site%2C PS00070 Aldehyde dehydrogenases cysteine active site and Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenases%2C score 598.80%2C E-value 3.2e-176;gbkey=CDS;gene=SC6A9.10c;product=aldehyde dehydrogenase;protein_id=NP_629787.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6156172	6157560	.	+	.	ID=id7385;Dbxref=GeneID:1101096;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenases%2C score 598.80%2C E-value 3.2e-176;gbkey=misc_feature;gene=SC6A9.10c
NC_003888.3	RefSeq	sequence_feature	6156877	6156900	.	+	.	ID=id7386;Dbxref=GeneID:1101096;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SC6A9.10c
NC_003888.3	RefSeq	sequence_feature	6156961	6156996	.	+	.	ID=id7387;Dbxref=GeneID:1101096;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SC6A9.10c
NC_003888.3	RefSeq	gene	6157741	6158940	.	+	.	ID=gene5717;Dbxref=GeneID:1101097;Name=SC6A9.09c;gbkey=Gene;gene=SC6A9.09c;gene_biotype=protein_coding;gene_synonym=SC6A9.09c;locus_tag=SCO5658
NC_003888.3	RefSeq	CDS	6157741	6158940	.	+	0	ID=cds5604;Parent=gene5717;Dbxref=Genbank:NP_629788.1,GeneID:1101097;Name=NP_629788.1;Note=SC6A9.09c%2C possible polyamine-binding lipoprotein%2C len: 399 aa%3B some similarity to several spermidine /putrescine /putrescine-binding%3D scores%3B opt: 389 z-score: 352.1 E(): 2.2e-12%2C 26.9%25 identity in 349 aa overlap. Contains N-terminal siganl sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC6A9.09c;product=polyamine-binding lipoprotein;protein_id=NP_629788.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6157810	6157842	.	+	.	ID=id7388;Dbxref=GeneID:1101097;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6A9.09c
NC_003888.3	RefSeq	gene	6158953	6159492	.	+	.	ID=gene5718;Dbxref=GeneID:1101098;Name=SC6A9.08c;gbkey=Gene;gene=SC6A9.08c;gene_biotype=protein_coding;gene_synonym=SC6A9.08c;locus_tag=SCO5659
NC_003888.3	RefSeq	CDS	6158953	6159492	.	+	0	ID=cds5605;Parent=gene5718;Dbxref=Genbank:NP_629789.1,GeneID:1101098;Name=NP_629789.1;Note=SC6A9.08c%2C possible integral membrane protein%2C len: 179 aa%3B contains four possible transmembrane domains;gbkey=CDS;gene=SC6A9.08c;product=hypothetical protein;protein_id=NP_629789.1;transl_table=11
NC_003888.3	RefSeq	gene	6159509	6160669	.	-	.	ID=gene5719;Dbxref=GeneID:1101099;Name=SC6A9.07;gbkey=Gene;gene=SC6A9.07;gene_biotype=protein_coding;gene_synonym=SC6A9.07;locus_tag=SCO5660
NC_003888.3	RefSeq	CDS	6159509	6160669	.	-	0	ID=cds5606;Parent=gene5719;Dbxref=Genbank:NP_629790.1,GeneID:1101099;Name=NP_629790.1;Note=SC6A9.07%2C probable  peptidase%2C len: 386 aa%3B similar to e.g. DAC_STRSQ D-alanyl-D-alanine carboxypeptidase precursor (406 aa)%2C fasta scores%3B oopt: 544 z-score: 500.9 E(): 1.2e-20%2C 33.2%25 identity in 365 aa overlap. Contains N-terminal signal sequence and PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC6A9.07;product=peptidase;protein_id=NP_629790.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6159653	6159676	.	-	.	ID=id7389;Dbxref=GeneID:1101099;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC6A9.07
NC_003888.3	RefSeq	ribosome_entry_site	6160676	6160679	.	-	.	ID=id7390;Note=possible RBS upstream of SC6A9.07;gbkey=RBS
NC_003888.3	RefSeq	gene	6160823	6161548	.	-	.	ID=gene5720;Dbxref=GeneID:1101100;Name=SC6A9.06;gbkey=Gene;gene=SC6A9.06;gene_biotype=protein_coding;gene_synonym=SC6A9.06;locus_tag=SCO5661
NC_003888.3	RefSeq	CDS	6160823	6161548	.	-	0	ID=cds5607;Parent=gene5720;Dbxref=Genbank:NP_629791.1,GeneID:1101100;Name=NP_629791.1;Note=SC6A9.06%2C unknown%2C len: 241 aa%3B similar to hypothetical proteins e.g. Bacillus subtilis TR:O07592 (EMBL:Y14082) YhdW (243 aa)%2C fasta SCORES%3B opt: 144 z-score: 267.8 E(): 1.1e-07%2C 25.0%25 identity in 236 aa overlap;gbkey=CDS;gene=SC6A9.06;product=hypothetical protein;protein_id=NP_629791.1;transl_table=11
NC_003888.3	RefSeq	gene	6161552	6162715	.	-	.	ID=gene5721;Dbxref=GeneID:1101101;Name=SC6A9.05;gbkey=Gene;gene=SC6A9.05;gene_biotype=protein_coding;gene_synonym=SC6A9.05;locus_tag=SCO5662
NC_003888.3	RefSeq	CDS	6161552	6162715	.	-	0	ID=cds5608;Parent=gene5721;Dbxref=Genbank:NP_629792.1,GeneID:1101101;Name=NP_629792.1;Note=catalyzes the formation of inosine from adenosine;gbkey=CDS;gene=SC6A9.05;product=adenosine deaminase;protein_id=NP_629792.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6162767	6162770	.	+	.	ID=id7391;Note=possible RBS upstream of SC3A9.04c;gbkey=RBS
NC_003888.3	RefSeq	gene	6162772	6163452	.	+	.	ID=gene5722;Dbxref=GeneID:1101102;Name=SC3A9.04c;gbkey=Gene;gene=SC3A9.04c;gene_biotype=protein_coding;gene_synonym=SC3A9.04c;locus_tag=SCO5663
NC_003888.3	RefSeq	CDS	6162772	6163452	.	+	0	ID=cds5609;Parent=gene5722;Dbxref=Genbank:NP_629793.1,GeneID:1101102;Name=NP_629793.1;Note=SC3A9.04c%2C probable integral membrane protein%2C len: 226 aa%3B has highly proline-rich N-terminus and two possible transmembrane domains in the C-terminus. Similar to downstream ORF SC3A9.03c%2C fasta scores%3B E(): 6.5e-06%2C 41.0%25 identity in 134 aa overlap;gbkey=CDS;gene=SC3A9.04c;product=hypothetical protein;protein_id=NP_629793.1;transl_table=11
NC_003888.3	RefSeq	gene	6163511	6163960	.	+	.	ID=gene5723;Dbxref=GeneID:1101103;Name=SC3A9.03c;gbkey=Gene;gene=SC3A9.03c;gene_biotype=protein_coding;gene_synonym=SC3A9.03c;locus_tag=SCO5664
NC_003888.3	RefSeq	CDS	6163511	6163960	.	+	0	ID=cds5610;Parent=gene5723;Dbxref=Genbank:NP_629794.1,GeneID:1101103;Name=NP_629794.1;Note=SC3A9.03c%2C probable integral membrane protein%2C len: 149 aa%3B has Pro-%2C Gly-rich N-terminus and two possible transmembrane domains in the C-terminus%3B some similarity to M. tuberculosis hypothetical protein TR:E1264549 (EMBL:AL022121) MTV025.037 (451 aa)%2C fasta scores%3B opt: 183 z-score: 182.2 E(): 0.0066%2C 33.1%25 identity in 145 aa overlap. Also similar to upstream gene SC3A9.04c%2C fasta scores%3B E(): 1.5e-06%2C 41.0%25 identity in 134 aa overlap;gbkey=CDS;gene=SC3A9.03c;product=hypothetical protein;protein_id=NP_629794.1;transl_table=11
NC_003888.3	RefSeq	gene	6164022	6164663	.	-	.	ID=gene5724;Dbxref=GeneID:1101104;Name=SC6A9.02;gbkey=Gene;gene=SC6A9.02;gene_biotype=protein_coding;gene_synonym=SC6A9.02;locus_tag=SCO5665
NC_003888.3	RefSeq	CDS	6164022	6164663	.	-	0	ID=cds5611;Parent=gene5724;Dbxref=Genbank:NP_629795.1,GeneID:1101104;Name=NP_629795.1;Note=SC6A9.02%2C unknown%2C len: 213 aa%3B some similarity to several hypothetical proteins from Caenorhabditis elegans e.g. TR:G3168942 (EMBL:AF068713) T24A6.7 (206 aa)%2C fasta scores%3B opt: 256 z-score: 328.5 E(): 4.7e-11%2C 31.2%25 identity in 154 aa overlap;gbkey=CDS;gene=SC6A9.02;product=hypothetical protein;protein_id=NP_629795.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6164669	6164672	.	-	.	ID=id7392;Note=possible RBS upstream of SC6A9.02;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6164830	6164834	.	+	.	ID=id7393;Note=possible RBS upstream of SC6A9.01c;gbkey=RBS
NC_003888.3	RefSeq	gene	6164842	6166377	.	+	.	ID=gene5725;Dbxref=GeneID:1101105;Name=SC6A9.01c;gbkey=Gene;gene=SC6A9.01c;gene_biotype=protein_coding;gene_synonym=SC6A9.01c,SC8B7.12c;locus_tag=SCO5666
NC_003888.3	RefSeq	CDS	6164842	6166377	.	+	0	ID=cds5612;Parent=gene5725;Dbxref=Genbank:NP_733669.1,GeneID:1101105;Name=NP_733669.1;Note=catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation;gbkey=CDS;gene=SC6A9.01c;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=NP_733669.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6165430	6166326	.	+	.	ID=id7394;Dbxref=GeneID:1101105;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydro genases%2C score 153.00%2C E-value 5.3e-42;gbkey=misc_feature;gene=SC6A9.01c
NC_003888.3	RefSeq	sequence_feature	6165634	6165657	.	+	.	ID=id7395;Dbxref=GeneID:1101105;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SC6A9.01c
NC_003888.3	RefSeq	sequence_feature	6165718	6165753	.	+	.	ID=id7396;Dbxref=GeneID:1101105;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SC6A9.01c
NC_003888.3	RefSeq	gene	6166490	6167689	.	+	.	ID=gene5726;Dbxref=GeneID:1101106;Name=SC8B7.11c;gbkey=Gene;gene=SC8B7.11c;gene_biotype=protein_coding;gene_synonym=SC8B7.11c;locus_tag=SCO5667
NC_003888.3	RefSeq	CDS	6166490	6167689	.	+	0	ID=cds5613;Parent=gene5726;Dbxref=Genbank:NP_629796.1,GeneID:1101106;Name=NP_629796.1;Note=SC8B7.11c%2C probable ABC-transporter polyamine-binding lipoprotein%2C len: 399 aa%3B similar to e.g. POTF_ECOLI putrescine-binding periplasmic protein precursor (370 aa)%2C fasta scores%3B opt: 327 z-score: 259.5 E(): 3.4e-07%2C 28.5%25 identity in 365 aa overlap. Also similar to upstream gene SC6A9.09c (E(): 0%2C 46.8%25 identity in 391 aa overlap). Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site and PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible N-terminal region signal sequence peptide;gbkey=CDS;gene=SC8B7.11c;product=ABC transporter substrate-binding protein;protein_id=NP_629796.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6166568	6166600	.	+	.	ID=id7397;Dbxref=GeneID:1101106;Note=PS00013 Prokaryotic membrane lipoprotein lipid attac hment site;gbkey=misc_feature;gene=SC8B7.11c
NC_003888.3	RefSeq	sequence_feature	6166601	6166624	.	+	.	ID=id7398;Dbxref=GeneID:1101106;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8B7.11c
NC_003888.3	RefSeq	gene	6167695	6168888	.	+	.	ID=gene5727;Dbxref=GeneID:1101107;Name=SC8B7.10c;gbkey=Gene;gene=SC8B7.10c;gene_biotype=protein_coding;gene_synonym=SC8B7.10c;locus_tag=SCO5668
NC_003888.3	RefSeq	CDS	6167695	6168888	.	+	0	ID=cds5614;Parent=gene5727;Dbxref=Genbank:NP_629797.1,GeneID:1101107;Name=NP_629797.1;Note=SC8B7.10c%2C probable polyamine ABC-transporter ATP-bi nding protein%2C len: 397 aa%3B similar to many e.g. POTA_ECOLI spermidine/putrescine transport ATP-binding (378 aa)%2C fast a scores%3B opt: 933 z-score: 1101.5 E(): 0%2C 47.7%25 identity i n 325 aa overlap. Contains PS00017 ATP/GTP-binding site mot if A (P-loop)%2C PS00211 ABC transporters family signature an d Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C s core 216.70%2C E-value 3.6e-61;gbkey=CDS;gene=SC8B7.10c;product=polyamine ABC transporter ATP-binding protein;protein_id=NP_629797.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6167824	6168363	.	+	.	ID=id7399;Dbxref=GeneID:1101107;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporte rs%2C score 216.70%2C E-value 3.6e-61;gbkey=misc_feature;gene=SC8B7.10c
NC_003888.3	RefSeq	sequence_feature	6167845	6167868	.	+	.	ID=id7400;Dbxref=GeneID:1101107;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8B7.10c
NC_003888.3	RefSeq	sequence_feature	6168133	6168177	.	+	.	ID=id7401;Dbxref=GeneID:1101107;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC8B7.10c
NC_003888.3	RefSeq	ribosome_entry_site	6168877	6168880	.	+	.	ID=id7402;Dbxref=GeneID:1101107;Note=possible RBS upstream of SC8B7.09c;gbkey=RBS;gene=SC8B7.10c
NC_003888.3	RefSeq	gene	6168888	6169817	.	+	.	ID=gene5728;Dbxref=GeneID:1101108;Name=SC8B7.09c;gbkey=Gene;gene=SC8B7.09c;gene_biotype=protein_coding;gene_synonym=SC8B7.09c;locus_tag=SCO5669
NC_003888.3	RefSeq	CDS	6168888	6169817	.	+	0	ID=cds5615;Parent=gene5728;Dbxref=Genbank:NP_629798.1,GeneID:1101108;Name=NP_629798.1;Note=SC8B7.09c%2C probable polyamine ABC-transporter integr al membrane protein%2C len: 309 aa%3B similar to many e.g. POTB _ECOLI spermidine/putrescine transport system permease (275 aa)%2C fasta scores%3B opt: 548 z-score: 685.1 E(): 6.6e-31%2C 3 6.9%25 identity in 274 aa overlap. Contains Pfam match to ent ry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 38.20%2C E-value 1.8e -07;gbkey=CDS;gene=SC8B7.09c;product=polyamine ABC-transporter integral memb rane protein;protein_id=NP_629798.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6169485	6169706	.	+	.	ID=id7403;Dbxref=GeneID:1101108;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-prot ein-dependent transport systems inner membrane component%2C s core 38.20%2C E-value 1.8e-07;gbkey=misc_feature;gene=SC8B7.09c
NC_003888.3	RefSeq	ribosome_entry_site	6169802	6169806	.	+	.	ID=id7404;Dbxref=GeneID:1101108;Note=possible RBS upstream of SC8B7.08c;gbkey=RBS;gene=SC8B7.09c
NC_003888.3	RefSeq	gene	6169818	6170618	.	+	.	ID=gene5729;Dbxref=GeneID:1101109;Name=SC8B7.08c;gbkey=Gene;gene=SC8B7.08c;gene_biotype=protein_coding;gene_synonym=SC8B7.08c;locus_tag=SCO5670
NC_003888.3	RefSeq	CDS	6169818	6170618	.	+	0	ID=cds5616;Parent=gene5729;Dbxref=Genbank:NP_629799.1,GeneID:1101109;Name=NP_629799.1;Note=SC8B7.08c%2C probable polyamine ABC-transporter integr al membrane protein%2C len: 266 aa%3B similar to many e.g. POTC _ECOLI spermidine/putrescine transport system permease (264 aa)%2C fasta scores%3B opt: 579 z-score: 718.8 E(): 8.8e-33%2C 3 5.5%25 identity in 251 aa overlap. Contains Pfam match to ent ry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 23.00%2C E-value 0.00 7;gbkey=CDS;gene=SC8B7.08c;product=polyamine ABC-transporter integral memb rane protein;protein_id=NP_629799.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6170286	6170498	.	+	.	ID=id7405;Dbxref=GeneID:1101109;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-prot ein-dependent transport systems inner membrane component%2C s core 23.00%2C E-value 0.007;gbkey=misc_feature;gene=SC8B7.08c
NC_003888.3	RefSeq	ribosome_entry_site	6170642	6170645	.	+	.	ID=id7406;Note=possible RBS upstream of SC8B7.07c;gbkey=RBS
NC_003888.3	RefSeq	gene	6170654	6172081	.	+	.	ID=gene5730;Dbxref=GeneID:1101110;Name=SC8B7.07c;gbkey=Gene;gene=SC8B7.07c;gene_biotype=protein_coding;gene_synonym=SC8B7.07c;locus_tag=SCO5671
NC_003888.3	RefSeq	CDS	6170654	6172081	.	+	0	ID=cds5617;Parent=gene5730;Dbxref=Genbank:NP_629800.1,GeneID:1101110;Name=NP_629800.1;Note=SC8B7.07c%2C possible oxidoreductase%2C len: 475 aa%3B some similarity to e.g. ORDL_ECOLI probable oxidoreductase ord L (426 aa)%2C fasta scores%3B opt: 413 z-score: 280.3 E(): 2.4 e-08%2C 32.1%25 identity in 436 aa overlap;gbkey=CDS;gene=SC8B7.07c;product=oxidoreductase;protein_id=NP_629800.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6172193	6172197	.	+	.	ID=id7407;Note=possible RBS upstream of SC8B7.06c;gbkey=RBS
NC_003888.3	RefSeq	gene	6172204	6172662	.	+	.	ID=gene5731;Dbxref=GeneID:1101111;Name=SC8B7.06c;gbkey=Gene;gene=SC8B7.06c;gene_biotype=protein_coding;gene_synonym=SC8B7.06c;locus_tag=SCO5672
NC_003888.3	RefSeq	CDS	6172204	6172662	.	+	0	ID=cds5618;Parent=gene5731;Dbxref=Genbank:NP_629801.1,GeneID:1101111;Name=NP_629801.1;Note=SC8B7.06c%2C unknown%2C len: 152 aa;gbkey=CDS;gene=SC8B7.06c;product=hypothetical protein;protein_id=NP_629801.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6172709	6174783	.	+	.	ID=id7408;Note=match to D84193 Streptomyces lividans gene for chiti nase%2C from 23 to 2097;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6172794	6172798	.	+	.	ID=id7409;Note=possible RBS upstream of SC8B7.05c;gbkey=RBS
NC_003888.3	RefSeq	gene	6172804	6174636	.	+	.	ID=gene5732;Dbxref=GeneID:1101112;Name=chiB;gbkey=Gene;gene=chiB;gene_biotype=protein_coding;gene_synonym=chiB,SC8B7.05c;locus_tag=SCO5673
NC_003888.3	RefSeq	CDS	6172804	6174636	.	+	0	ID=cds5619;Parent=gene5732;Dbxref=Genbank:NP_629802.1,GeneID:1101112;Name=NP_629802.1;Note=SC8B7.05c%2C chiB%2C  chitinase%2C len: 610 aa%3B almost identical to S. lividans TR:D1026067 (EMBL:D84193) chitinase ChiB (EC 3.2.1.14) (610 aa)%2C 99.3%25 identity in 610 aa overlap%2C and highly similar to many e.g. CHIX_STROI Streptomyces olivaceoviridis exochitinase 1 precursor (EC 3.2.1.14) ( 597 aa)%2C fasta scores%3B opt: 3484 z-score: 2485.6 E(): 0%2C 86.1%25 identity in 596 aa overlap. Contains PS01095 Chitinases family 18 active site. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=chiB;product=chitinase;protein_id=NP_629802.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6173968	6173994	.	+	.	ID=id7410;Dbxref=GeneID:1101112;Note=PS01095 Chitinases family 18 active site;gbkey=misc_feature;gene=chiB
NC_003888.3	RefSeq	gene	6174575	6175318	.	-	.	ID=gene5733;Dbxref=GeneID:1101113;Name=SC8B7.04;gbkey=Gene;gene=SC8B7.04;gene_biotype=protein_coding;gene_synonym=SC8B7.04;locus_tag=SCO5674
NC_003888.3	RefSeq	CDS	6174575	6175318	.	-	0	ID=cds5620;Parent=gene5733;Dbxref=Genbank:NP_629803.1,GeneID:1101113;Name=NP_629803.1;Note=SC8B7.04%2C probable integral membrane protein%2C len: 247 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8B7.04;product=hypothetical protein;protein_id=NP_629803.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6175132	6175178	.	-	.	ID=id7411;Dbxref=GeneID:1101113;Note=hairpin loop with 18bp stem;gbkey=stem_loop;gene=SC8B7.04
NC_003888.3	RefSeq	ribosome_entry_site	6175381	6175384	.	+	.	ID=id7412;Note=possible RBS upstream of SC8B7.03c;gbkey=RBS
NC_003888.3	RefSeq	gene	6175387	6176157	.	+	.	ID=gene5734;Dbxref=GeneID:1101114;Name=SC8B7.03c;gbkey=Gene;gene=SC8B7.03c;gene_biotype=protein_coding;gene_synonym=SC8B7.03c;locus_tag=SCO5675
NC_003888.3	RefSeq	CDS	6175387	6176157	.	+	0	ID=cds5621;Parent=gene5734;Dbxref=Genbank:NP_629804.1,GeneID:1101114;Name=NP_629804.1;Note=SC8B7.03c%2C unknown%2C len: 256 aa;gbkey=CDS;gene=SC8B7.03c;product=hypothetical protein;protein_id=NP_629804.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6176159	6176206	.	-	.	ID=id7413;Note=hairpin loop with 18bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6176557	6177891	.	-	.	ID=gene5735;Dbxref=GeneID:1101115;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;gene_synonym=gabT;locus_tag=SCO5676
NC_003888.3	RefSeq	CDS	6176557	6177891	.	-	0	ID=cds5622;Parent=gene5735;Dbxref=Genbank:NP_629805.1,GeneID:1101115;Name=NP_629805.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;gene=gabT;product=4-aminobutyrate aminotransferase;protein_id=NP_629805.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6176623	6177753	.	-	.	ID=id7414;Dbxref=GeneID:1101115;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransf erases class-III pyridoxal-phosphate%2C score 516.20%2C E-value 5e-179;gbkey=misc_feature;gene=gabT
NC_003888.3	RefSeq	sequence_feature	6177013	6177126	.	-	.	ID=id7415;Dbxref=GeneID:1101115;Note=PS00600 Aminotransferases class-III pyridoxal-phosph ate attachment site;gbkey=misc_feature;gene=gabT
NC_003888.3	RefSeq	ribosome_entry_site	6177898	6177902	.	-	.	ID=id7416;Note=possible RBS upstream of gabT;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6178238	6178241	.	+	.	ID=id7417;Note=possible RBS upstream of SC8B7.01c;gbkey=RBS
NC_003888.3	RefSeq	gene	6178250	6180280	.	+	.	ID=gene5736;Dbxref=GeneID:1101116;Name=SC5H4.01;gbkey=Gene;gene=SC5H4.01;gene_biotype=protein_coding;gene_synonym=SC5H4.01,SC8B7.01c;locus_tag=SCO5677
NC_003888.3	RefSeq	CDS	6178250	6180280	.	+	0	ID=cds5623;Parent=gene5736;Dbxref=Genbank:NP_733670.1,GeneID:1101116;Name=NP_733670.1;Note=SC5H4.01%2C possible ATP/GTP binding protein ( membrane protein) (fragment)%2C len: >350 aa~SC8B7.01c%2C probable ATP/GTP binding protein (membrane protein)%2C partial CDS%2C len: >604 aa. Contains PS00017 ATP/GTP-binding site m otif A (P-loop)%2C and two possible transmembrane domains at C-terminus;gbkey=CDS;gene=SC5H4.01;product=ATP/GTP binding protein;protein_id=NP_733670.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6179075	6179098	.	+	.	ID=id7418;Dbxref=GeneID:1101116;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5H4.01
NC_003888.3	RefSeq	gene	6180444	6182102	.	+	.	ID=gene5737;Dbxref=GeneID:1101117;Name=SC5H4.02;gbkey=Gene;gene=SC5H4.02;gene_biotype=protein_coding;gene_synonym=SC5H4.02;locus_tag=SCO5678
NC_003888.3	RefSeq	CDS	6180444	6182102	.	+	0	ID=cds5624;Parent=gene5737;Dbxref=Genbank:NP_629806.1,GeneID:1101117;Name=NP_629806.1;Note=SC5H4.02%2C possible regulatory protein%2C len: 552 aa%3B similar to TR:Q9ZBP0 (EMBL:AL034492) Streptomyces coelicolor  regulatory protein SC6C5.05c%2C 569 aa%3B fasta scores: opt: 310 z-score: 323.3 E(): 1.5e-10%3B 30.0%25 identity in 587 aa overlap;gbkey=CDS;gene=SC5H4.02;product=regulatory protein;protein_id=NP_629806.1;transl_table=11
NC_003888.3	RefSeq	gene	6182246	6183691	.	+	.	ID=gene5738;Dbxref=GeneID:1101118;Name=SC5H4.03;gbkey=Gene;gene=SC5H4.03;gene_biotype=protein_coding;gene_synonym=SC5H4.03;locus_tag=SCO5679
NC_003888.3	RefSeq	CDS	6182246	6183691	.	+	0	ID=cds5625;Parent=gene5738;Dbxref=Genbank:NP_629807.1,GeneID:1101118;Name=NP_629807.1;Note=SC5H4.03%2C probable aldehyde dehydrogenase%2C len: 481 aa%3B similar to TR:O66573 (EMBL:AE000677) Aquifex aeolicus aldehyde dehydrogenase AldH1%2C 476 aa%3B fasta scores: opt: 1129 z-score: 1260.2 E(): 0%3B 39.9%25 identity in 471 aa overlap and to SW:GAPN_STRMU (EMBL:L38521) Streptococcus mutans NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) GapN%2C 475 aa%3B fasta scores: opt: 893 z-score: 997.5 E(): 0%3B 35.4%25 identity in 477 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family;gbkey=CDS;gene=SC5H4.03;product=aldehyde dehydrogenase;protein_id=NP_629807.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6182273	6183679	.	+	.	ID=id7419;Dbxref=GeneID:1101118;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 357.30%2C E-value 1.6e-103;gbkey=misc_feature;gene=SC5H4.03
NC_003888.3	RefSeq	gene	6183701	6184114	.	-	.	ID=gene5739;Dbxref=GeneID:1101119;Name=SC5H4.04c;gbkey=Gene;gene=SC5H4.04c;gene_biotype=protein_coding;gene_synonym=SC5H4.04c;locus_tag=SCO5680
NC_003888.3	RefSeq	CDS	6183701	6184114	.	-	0	ID=cds5626;Parent=gene5739;Dbxref=Genbank:NP_629808.1,GeneID:1101119;Name=NP_629808.1;Note=SC5H4.04c%2C probable cytidine deaminase%2C len: 137 aa%3B similar to TR:O53367 (EMBL:AL021841) Mycobacterium tuberculosis cytidine deaminase Cdd%2C 133 aa%3B fasta scores: opt 185 z-score: 244.6 E(): 3.6e-06%3B 37.4%25 identity in 115 aa overlap and to SW:CDD_MOUSE (EMBL:AA388666) Mus musculus cytidine deaminase (EC 3.5.4.5) Cdd%2C 146 aa%3B fasta scores: opt: 173 z-score: 229.1 E(): 2.6e-05%3B 29.2%25 identity in 113 aa overlap. Contains Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region and match to Prosite entry PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature;gbkey=CDS;gene=SC5H4.04c;product=cytidine deaminase;protein_id=NP_629808.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6183800	6184045	.	-	.	ID=id7420;Dbxref=GeneID:1101119;Note=Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region%2C score 10.30%2C E-value 0.027;gbkey=misc_feature;gene=SC5H4.04c
NC_003888.3	RefSeq	sequence_feature	6183824	6183949	.	-	.	ID=id7421;Dbxref=GeneID:1101119;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature;gbkey=misc_feature;gene=SC5H4.04c
NC_003888.3	RefSeq	gene	6184140	6185315	.	-	.	ID=gene5740;Dbxref=GeneID:1101120;Name=SC5H4.05c;gbkey=Gene;gene=SC5H4.05c;gene_biotype=protein_coding;gene_synonym=SC5H4.05c;locus_tag=SCO5681
NC_003888.3	RefSeq	CDS	6184140	6185315	.	-	0	ID=cds5627;Parent=gene5740;Dbxref=Genbank:NP_629809.1,GeneID:1101120;Name=NP_629809.1;Note=SC5H4.05c%2C possible glycosyl transferase%2C len: 391 aa%3B similar to TR:Q9X7Z1 (EMBL:AL049497) Streptomyces coelicolor  glycosyl transferase SC6G10.05c%2C 412 aa%3B fasta scores: opt: 1364 z-score: 1557.1 E(): 0%3B 56.4%25 identity in 385 aa overlap. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1;gbkey=CDS;gene=SC5H4.05c;product=glycosyl transferase;protein_id=NP_629809.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6184242	6184727	.	-	.	ID=id7422;Dbxref=GeneID:1101120;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 78.90%2C E-value 1.9e-21;gbkey=misc_feature;gene=SC5H4.05c
NC_003888.3	RefSeq	gene	6185312	6186445	.	-	.	ID=gene5741;Dbxref=GeneID:1101121;Name=SC5H4.06c;gbkey=Gene;gene=SC5H4.06c;gene_biotype=protein_coding;gene_synonym=SC5H4.06c;locus_tag=SCO5682
NC_003888.3	RefSeq	CDS	6185312	6186445	.	-	0	ID=cds5628;Parent=gene5741;Dbxref=Genbank:NP_629810.1,GeneID:1101121;Name=NP_629810.1;Note=SC5H4.06c%2C possible integral membrane protein%2C len: 377 aa%3B similar to TR:Q53873 (EMBL:AL031317) Streptomyces coelicolor  integral membrane protein SC6G4.11%2C 411 aa%3B fasta scores: opt: 180 z-score: 193.2 E(): 0.0027%3B 33.8%25 identity in 340 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5H4.06c;product=hypothetical protein;protein_id=NP_629810.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6185326	6185332	.	-	.	ID=id7423;Dbxref=GeneID:1101121;gbkey=RBS;gene=SC5H4.06c
NC_003888.3	RefSeq	ribosome_entry_site	6186582	6186586	.	+	.	ID=id7424;gbkey=RBS
NC_003888.3	RefSeq	gene	6186588	6187784	.	+	.	ID=gene5742;Dbxref=GeneID:1101122;Name=SC5H4.07;gbkey=Gene;gene=SC5H4.07;gene_biotype=protein_coding;gene_synonym=SC5H4.07;locus_tag=SCO5683
NC_003888.3	RefSeq	CDS	6186588	6187784	.	+	0	ID=cds5629;Parent=gene5742;Dbxref=Genbank:NP_629811.1,GeneID:1101122;Name=NP_629811.1;Note=SC5H4.07%2C probable two-component system sensor kinase%2C len: 398 aa%3B similar to TR:Q9X851 (EMBL:AL049630) Streptomyces coelicolor two-component sensor kinase SCE126.08c%2C 401 aa%3B fasta scores: opt: 581 z-score: 640.5 E(): 3.2e-28%3B 36.8%25 identity in 361 aa overlap and to TR:BAA88406 (EMBL:AB016841) Streptomyces thermoviolaceus ChiS protein%2C 448 aa%3B fasta scores: opt: 445 z-score: 491.3 E(): 6.6e-20%3B 34.5%25 identity in 391 aa overlap. Contains possible hydrophobic membrane spanning regions in N-terminal domain;gbkey=CDS;gene=SC5H4.07;product=two-component system sensor kinase;protein_id=NP_629811.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6187774	6187777	.	+	.	ID=id7425;Dbxref=GeneID:1101122;gbkey=RBS;gene=SC5H4.07
NC_003888.3	RefSeq	gene	6187781	6188494	.	+	.	ID=gene5743;Dbxref=GeneID:1101123;Name=SC5H4.08;gbkey=Gene;gene=SC5H4.08;gene_biotype=protein_coding;gene_synonym=SC5H4.08;locus_tag=SCO5684
NC_003888.3	RefSeq	CDS	6187781	6188494	.	+	0	ID=cds5630;Parent=gene5743;Dbxref=Genbank:NP_629812.1,GeneID:1101123;Name=NP_629812.1;Note=SC5H4.08%2C probable two-component system response regulator%2C len: 237 aa%3B similar to TR:Q9X8Q7 (EMBL:AL049754) Streptomyces coelicolor two-component system regulator SCH10.18c%2C 228 aa%3B fasta scores: opt: 780 z-score: 922.5 E(): 0%3B 58.7%25 identity in 225 aa overlap and to TR:BAA88407 (EMBL:AB016841) Streptomyces thermoviolaceus ChiR protein%2C 213 aa%3B fasta scores: opt: 567 z-score: 674.0 E(): 4.4e-30%3B 46.9%25 identity in 213 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature and also a possible helix-turn-helix motif at residues 180..201 (+2.70 SD);gbkey=CDS;gene=SC5H4.08;product=two-component system response regulator;protein_id=NP_629812.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6187817	6188161	.	+	.	ID=id7426;Dbxref=GeneID:1101123;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 106.30%2C E-value 6.1e-28;gbkey=misc_feature;gene=SC5H4.08
NC_003888.3	RefSeq	sequence_feature	6188264	6188461	.	+	.	ID=id7427;Dbxref=GeneID:1101123;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 73.70%2C E-value 3.8e-18;gbkey=misc_feature;gene=SC5H4.08
NC_003888.3	RefSeq	sequence_feature	6188315	6188398	.	+	.	ID=id7428;Dbxref=GeneID:1101123;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC5H4.08
NC_003888.3	RefSeq	gene	6188536	6191418	.	-	.	ID=gene5744;Dbxref=GeneID:1101124;Name=SC5H4.09c;gbkey=Gene;gene=SC5H4.09c;gene_biotype=protein_coding;gene_synonym=SC5H4.09c;locus_tag=SCO5685
NC_003888.3	RefSeq	CDS	6188536	6191418	.	-	0	ID=cds5631;Parent=gene5744;Dbxref=Genbank:NP_629813.1,GeneID:1101124;Name=NP_629813.1;Note=SC5H4.09c%2C probable sugar hydrolase%2C len: 960 aa%3B similar to TR:Q59506 (EMBL:L06134) Microbispora bispora glucan-glucohydrolase (EC 3.2.1.74) (glucan 1%2C4-beta-glucosidase) (exo-1%2C4-beta-glucosidase) BglA%2C 986 aa%3B fasta scores: opt: 1257 z-score: 1346.1 E(): 0%3B 47.7%25 identity in 979 aa overlap. Contains Pfam matches to entries PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain and PF01915 Glyco_hydro_3_C%2C Glycosyl hydrolase family 3 C terminal domain;gbkey=CDS;gene=SC5H4.09c;product=sugar hydrolase;protein_id=NP_629813.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6189466	6190422	.	-	.	ID=id7429;Dbxref=GeneID:1101124;Note=Pfam match to entry PF01915 Glyco_hydro_3_C%2C Glycosyl hydrolase family 3 C terminal domain%2C score 51.10%2C E-value 2.5e-11;gbkey=misc_feature;gene=SC5H4.09c
NC_003888.3	RefSeq	sequence_feature	6190540	6191376	.	-	.	ID=id7430;Dbxref=GeneID:1101124;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain%2C score 232.20%2C E-value 7.5e-66;gbkey=misc_feature;gene=SC5H4.09c
NC_003888.3	RefSeq	gene	6191668	6193353	.	+	.	ID=gene5745;Dbxref=GeneID:1101125;Name=SC5H4.10;gbkey=Gene;gene=SC5H4.10;gene_biotype=protein_coding;gene_synonym=SC5H4.10;locus_tag=SCO5686
NC_003888.3	RefSeq	CDS	6191668	6193353	.	+	0	ID=cds5632;Parent=gene5745;Dbxref=Genbank:NP_629814.1,GeneID:1101125;Name=NP_629814.1;Note=SC5H4.10%2C probable lipoprotein%2C len: 561 aa%3B similar to SW:LPLA_BACSU (EMBL:L03376) Bacillus subtilis LplA%2C 502 aa%3B fasta scores: opt: 364 z-score: 402.3 E(): 6e-15%3B 23.6%25 identity in 483 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site%2C possible N-terminal region signal peptide sequence and possible colied-coil region at residues 562..575;gbkey=CDS;gene=SC5H4.10;product=lipoprotein;protein_id=NP_629814.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6191740	6191772	.	+	.	ID=id7431;Dbxref=GeneID:1101125;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC5H4.10
NC_003888.3	RefSeq	ribosome_entry_site	6193370	6193374	.	+	.	ID=id7432;gbkey=RBS
NC_003888.3	RefSeq	gene	6193381	6194421	.	+	.	ID=gene5746;Dbxref=GeneID:1101126;Name=SC5H4.11;gbkey=Gene;gene=SC5H4.11;gene_biotype=protein_coding;gene_synonym=SC5H4.11;locus_tag=SCO5687
NC_003888.3	RefSeq	CDS	6193381	6194421	.	+	0	ID=cds5633;Parent=gene5746;Dbxref=Genbank:NP_629815.1,GeneID:1101126;Name=NP_629815.1;Note=SC5H4.11%2C probable transport system integral membrane protein%2C len: 346 aa%3B similar to SW:LPLB_BACSU (EMBL:L19163) Bacillus subtilis LplB protein%2C 318 aa%3B fasta scores: opt: 814 z-score: 950.7 E(): 0%3B 38.2%25 identity in 309 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5H4.11;product=transport system integral membrane protein;protein_id=NP_629815.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6194059	6194283	.	+	.	ID=id7433;Dbxref=GeneID:1101126;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 45.20%2C E-value 1.4e-09;gbkey=misc_feature;gene=SC5H4.11
NC_003888.3	RefSeq	sequence_feature	6194062	6194148	.	+	.	ID=id7434;Dbxref=GeneID:1101126;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC5H4.11
NC_003888.3	RefSeq	gene	6194418	6195389	.	+	.	ID=gene5747;Dbxref=GeneID:1101127;Name=SC5H4.12;gbkey=Gene;gene=SC5H4.12;gene_biotype=protein_coding;gene_synonym=SC5H4.12;locus_tag=SCO5688
NC_003888.3	RefSeq	CDS	6194418	6195389	.	+	0	ID=cds5634;Parent=gene5747;Dbxref=Genbank:NP_629816.1,GeneID:1101127;Name=NP_629816.1;Note=SC5H4.12%2C probable transport system integral membrane protein%2C len: 323 aa%3B similar to SW:LPLC_BACSU (EMBL:L19164) Bacillus subtilis LplC%2C 295 aa%3B fasta scores: opt: 669 z-score: 758.9 E(): 0%3B 38.0%25 identity in 276 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5H4.12;product=transport system integral membrane protein;protein_id=NP_629816.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6194994	6195227	.	+	.	ID=id7435;Dbxref=GeneID:1101127;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 29.80%2C E-value 6.4e-05;gbkey=misc_feature;gene=SC5H4.12
NC_003888.3	RefSeq	gene	6195389	6197359	.	+	.	ID=gene5748;Dbxref=GeneID:1101128;Name=SC5H4.13;gbkey=Gene;gene=SC5H4.13;gene_biotype=protein_coding;gene_synonym=SC5H4.13;locus_tag=SCO5689
NC_003888.3	RefSeq	CDS	6195389	6197359	.	+	0	ID=cds5635;Parent=gene5748;Dbxref=Genbank:NP_629817.1,GeneID:1101128;Name=NP_629817.1;Note=SC5H4.13%2C probable beta-galactosidase%2C len: 656 aa%3B similar to SW:BGAL_BACST (EMBL:M13466) Bacillus stearothermophilus beta-galactosidase I (EC 3.2.1.23) (lactase) BgaB%2C 672 aa%3B fasta scores: opt: 1761 z-score: 2065.7 E(): 0%3B 41.3%25 identity in 634 aa overlap and to TR:CAB76326 (EMBL:AL158061) Streptomyces coelicolor probable beta-galactosidase SC6D11.03c%2C 681 aa%3B fasta scores: opt: 1739 z-score: 1719.0 E(): 0%3B 46.0%25 identity in 670 aa overlap;gbkey=CDS;gene=SC5H4.13;product=beta-galactosidase;protein_id=NP_629817.1;transl_table=11
NC_003888.3	RefSeq	gene	6197356	6199599	.	+	.	ID=gene5749;Dbxref=GeneID:1101129;Name=SC5H4.14;gbkey=Gene;gene=SC5H4.14;gene_biotype=protein_coding;gene_synonym=SC5H4.14;locus_tag=SCO5690
NC_003888.3	RefSeq	CDS	6197356	6199599	.	+	0	ID=cds5636;Parent=gene5749;Dbxref=Genbank:NP_629818.1,GeneID:1101129;Name=NP_629818.1;Note=SC5H4.14%2C hypothetical protein%2C len: 747 aa%3B similar to TR:CAB36703 (EMBL:AL035521) Arabidopsis thaliana hypothetical 94.0 kD protein AT4G34260%2C 847 aa%3B fasta scores: opt: 322 z-score: 354.9 E(): 2.6e-12%3B 25.6%25 identity in 754 aa overlap;gbkey=CDS;gene=SC5H4.14;product=hypothetical protein;protein_id=NP_629818.1;transl_table=11
NC_003888.3	RefSeq	gene	6199638	6200372	.	+	.	ID=gene5750;Dbxref=GeneID:1101130;Name=SC5H4.15;gbkey=Gene;gene=SC5H4.15;gene_biotype=protein_coding;gene_synonym=SC5H4.15;locus_tag=SCO5691
NC_003888.3	RefSeq	CDS	6199638	6200372	.	+	0	ID=cds5637;Parent=gene5750;Dbxref=Genbank:NP_629819.1,GeneID:1101130;Name=NP_629819.1;Note=SC5H4.15%2C probable  sugar hydrolase%2C len: 244 aa%3B similar to SW:GUNS_ERWCA (EMBL:M32399) Erwinia carotovora endoglucanase S precursor (EC 3.2.1.4) (endo-1%2C4-beta-glucanase S) (cellulase S) CelS%2C 264 aa%3B fasta scores: opt: 283 z-score: 330.2 E(): 6.2e-11%3B 33.2%25 identity in 253 aa overlap. Contains Pfam match to entry PF01670 Glyco_hydro_12%2C Glycosyl hydrolase family 12 and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5H4.15;product=hypothetical protein;protein_id=NP_629819.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6199926	6200363	.	+	.	ID=id7436;Dbxref=GeneID:1101130;Note=Pfam match to entry PF01670 Glyco_hydro_12%2C Glycosyl hydrolase family 12%2C score 44.40%2C E-value 2.6e-09;gbkey=misc_feature;gene=SC5H4.15
NC_003888.3	RefSeq	gene	6200514	6201527	.	-	.	ID=gene5751;Dbxref=GeneID:1101131;Name=SC5H4.16c;gbkey=Gene;gene=SC5H4.16c;gene_biotype=protein_coding;gene_synonym=SC5H4.16c;locus_tag=SCO5692
NC_003888.3	RefSeq	CDS	6200514	6201527	.	-	0	ID=cds5638;Parent=gene5751;Dbxref=Genbank:NP_629820.1,GeneID:1101131;Name=NP_629820.1;Note=SC5H4.16c%2C probable transcriptional regulator%2C len: 337 aa%3B similar to SW:CELR_THEFU (EMBL:AF086819) Thermomonospora fusca transcription regulator CelR%2C 340 aa%3B fasta scores: opt: 440 z-score: 531.7 E(): 3.7e-22%3B 31.6%25 identity in 339 aa overlap. Contains Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins%2C lacI family signature. Contains also possible helix-turn-helix motif at residues 2..23 (+6.39 SD);gbkey=CDS;gene=SC5H4.16c;product=transcriptional regulator;protein_id=NP_629820.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6200625	6201356	.	-	.	ID=id7437;Dbxref=GeneID:1101131;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 5.40%2C E-value 9.9e-06;gbkey=misc_feature;gene=SC5H4.16c
NC_003888.3	RefSeq	sequence_feature	6201447	6201527	.	-	.	ID=id7438;Dbxref=GeneID:1101131;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 35.70%2C E-value 1.3e-08;gbkey=misc_feature;gene=SC5H4.16c
NC_003888.3	RefSeq	sequence_feature	6201462	6201518	.	-	.	ID=id7439;Dbxref=GeneID:1101131;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SC5H4.16c
NC_003888.3	RefSeq	ribosome_entry_site	6201533	6201537	.	-	.	ID=id7440;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6201808	6201811	.	+	.	ID=id7441;gbkey=RBS
NC_003888.3	RefSeq	gene	6201820	6203796	.	+	.	ID=gene5752;Dbxref=GeneID:1101132;Name=SC5H4.17;gbkey=Gene;gene=SC5H4.17;gene_biotype=protein_coding;gene_synonym=SC5H4.17;locus_tag=SCO5693
NC_003888.3	RefSeq	CDS	6201820	6203796	.	+	0	ID=cds5639;Parent=gene5752;Dbxref=Genbank:NP_629821.1,GeneID:1101132;Name=NP_629821.1;Note=SC5H4.17%2C probable acyl CoA dehydrogenase%2C len: 658 aa%3B similar to SW:ACDV_BOVIN (EMBL:U30817) Bos taurus acyl-CoA dehydrogenase%2C very-long-chain specific precursor (EC 1.3.99.-) VlcaD%2C 655 aa%3B fasta scores: opt: 768 z-score: 864.8 E(): 0%3B 31.0%25 identity in 616 aa overlap . Contains 2x Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase;gbkey=CDS;gene=SC5H4.17;product=acyl CoA dehydrogenase;protein_id=NP_629821.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6202012	6202836	.	+	.	ID=id7442;Dbxref=GeneID:1101132;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 129.60%2C E-value 3.4e-37;gbkey=misc_feature;gene=SC5H4.17
NC_003888.3	RefSeq	sequence_feature	6202921	6203166	.	+	.	ID=id7443;Dbxref=GeneID:1101132;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 37.50%2C E-value 3.5e-10;gbkey=misc_feature;gene=SC5H4.17
NC_003888.3	RefSeq	gene	6203922	6205178	.	+	.	ID=gene5753;Dbxref=GeneID:1101133;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;gene_synonym=dxr,SC5H4.18;locus_tag=SCO5694
NC_003888.3	RefSeq	CDS	6203922	6205178	.	+	0	ID=cds5640;Parent=gene5753;Dbxref=Genbank:NP_629822.1,GeneID:1101133;Name=NP_629822.1;Note=catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate;gbkey=CDS;gene=dxr;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=NP_629822.1;transl_table=11
NC_003888.3	RefSeq	gene	6205187	6206479	.	+	.	ID=gene5754;Dbxref=GeneID:1101134;Name=SC5H4.19;gbkey=Gene;gene=SC5H4.19;gene_biotype=protein_coding;gene_synonym=SC5H4.19;locus_tag=SCO5695
NC_003888.3	RefSeq	CDS	6205187	6206479	.	+	0	ID=cds5641;Parent=gene5754;Dbxref=Genbank:NP_629823.1,GeneID:1101134;Name=NP_629823.1;Note=SC5H4.19%2C possible metalloprotease%2C len: 430 aa%3B similar to TR:O83609 (EMBL:AE001235) Treponema pallidum zinc protease%2C  TP0600%2C 450 aa%3B fasta scores: opt: 181 z-score: 205.4 E(): 0.00056%3B 28.0%25 identity in 400 aa overlap. Contains Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF) and match to Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature and also possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5H4.19;product=metalloprotease;protein_id=NP_629823.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6205235	6205264	.	+	.	ID=id7444;Dbxref=GeneID:1101134;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC5H4.19
NC_003888.3	RefSeq	sequence_feature	6205592	6205864	.	+	.	ID=id7445;Dbxref=GeneID:1101134;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF).%2C score 4.90%2C E-value 0.42;gbkey=misc_feature;gene=SC5H4.19
NC_003888.3	RefSeq	gene	6206675	6207832	.	+	.	ID=gene5755;Dbxref=GeneID:1101135;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=SCO5696
NC_003888.3	RefSeq	CDS	6206675	6207832	.	+	0	ID=cds5642;Parent=gene5755;Dbxref=Genbank:NP_629824.1,GeneID:1101135;Name=NP_629824.1;Note=catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis;gbkey=CDS;gene=ispG;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=NP_629824.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6207843	6208028	.	+	.	ID=id7446;Note=28617 AGGGGGTGTCGTTTGGCTCTTGCCGG 28642 28777 CCGGCCTGATCCAAACGGCACCCCCT 28802. Score 50: 22/26 (84%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6208102	6208965	.	+	.	ID=gene5756;Dbxref=GeneID:1101136;Name=SC5H4.21;gbkey=Gene;gene=SC5H4.21;gene_biotype=protein_coding;gene_synonym=SC5H4.21;locus_tag=SCO5697
NC_003888.3	RefSeq	CDS	6208102	6208965	.	+	0	ID=cds5643;Parent=gene5756;Dbxref=Genbank:NP_629825.1,GeneID:1101136;Name=NP_629825.1;Note=SC5H4.21%2C hypothetical protein%2C len: 287 aa%3B similar to TR:O33349 (EMBL:AL008883) Mycobacterium tuberculosis hypothetical 30.3 kD protein MTV003.13c%2C 284 aa%3B fasta scores: opt: 798 z-score: 942.8 E(): 0%3B 48.0%25 identity in 269 aa overlap;gbkey=CDS;gene=SC5H4.21;product=hypothetical protein;protein_id=NP_629825.1;transl_table=11
NC_003888.3	RefSeq	gene	6209024	6209566	.	+	.	ID=gene5757;Dbxref=GeneID:1101137;Name=SC5H4.22;gbkey=Gene;gene=SC5H4.22;gene_biotype=protein_coding;gene_synonym=SC5H4.22;locus_tag=SCO5698
NC_003888.3	RefSeq	CDS	6209024	6209566	.	+	0	ID=cds5644;Parent=gene5757;Dbxref=Genbank:NP_629826.1,GeneID:1101137;Name=NP_629826.1;Note=SC5H4.22%2C hypothetical protein%2C len: 180 aa%3B similar to TR:O69563 (EMBL:AL022602) Mycobacterium leprae hypothetical 23.9 kD protein MLCB268.13%2C 210 aa%3B fasta scores: opt: 243 z-score: 313.1 E(): 5.6e-10%3B 29.1%25 identity in 203 aa overlap;gbkey=CDS;gene=SC5H4.22;product=hypothetical protein;protein_id=NP_629826.1;transl_table=11
NC_003888.3	RefSeq	gene	6209640	6211343	.	+	.	ID=gene5758;Dbxref=GeneID:1101138;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;gene_synonym=proS,SC5H4.23;locus_tag=SCO5699
NC_003888.3	RefSeq	CDS	6209640	6211343	.	+	0	ID=cds5645;Parent=gene5758;Dbxref=Genbank:NP_629827.1,GeneID:1101138;Name=NP_629827.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;gene=proS;product=prolyl-tRNA synthetase;protein_id=NP_629827.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6210042	6211301	.	+	.	ID=id7447;Dbxref=GeneID:1101138;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetase class II (G%2C H%2C P%2C S and T)%2C score 25.90%2C E-value 9e-05;gbkey=misc_feature;gene=proS
NC_003888.3	RefSeq	sequence_feature	6210072	6210134	.	+	.	ID=id7448;Dbxref=GeneID:1101138;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1;gbkey=misc_feature;gene=proS
NC_003888.3	RefSeq	stem_loop	6211731	6211843	.	+	.	ID=id7449;Note=32505 GGGGCCGTGTCGGGGGGTGTCCGCCC 32530 32592 GGACGGACACCCCCCGGCGCGGCCCC 32617. Score 57: 23/26 (88%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6211917	6212816	.	-	.	ID=gene5759;Dbxref=GeneID:1101139;Name=SC5H4.24c;gbkey=Gene;gene=SC5H4.24c;gene_biotype=protein_coding;gene_synonym=SC5H4.24c;locus_tag=SCO5700
NC_003888.3	RefSeq	CDS	6211917	6212816	.	-	0	ID=cds5646;Parent=gene5759;Dbxref=Genbank:NP_629828.1,GeneID:1101139;Name=NP_629828.1;Note=SC5H4.24c%2C probable kinase%2C len: 299 aa%3B similar to SW:STRA_STRGA (EMBL:X05648) Streptomyces glaucescens streptomycin 6-kinase (EC 2.7.1.72) Sph%2C 307 aa%3B fasta scores: opt: 446 z-score: 504.5 E(): 1.2e-20%3B 34.7%25 identity in 271 aa overlap. Contains possible helix-turn-helix motif at residues 249..270 (+2.59 SD);gbkey=CDS;gene=SC5H4.24c;product=kinase;protein_id=NP_629828.1;transl_table=11
NC_003888.3	RefSeq	gene	6212856	6213359	.	-	.	ID=gene5760;Dbxref=GeneID:1101140;Name=SC5H4.25c;gbkey=Gene;gene=SC5H4.25c;gene_biotype=protein_coding;gene_synonym=SC5H4.25c;locus_tag=SCO5701
NC_003888.3	RefSeq	CDS	6212856	6213359	.	-	0	ID=cds5647;Parent=gene5760;Dbxref=Genbank:NP_629829.1,GeneID:1101140;Name=NP_629829.1;Note=SC5H4.25c hypothetical protein%2C len: 167 aa%3B similar to TR:O05815 (EMBL:Z95207) Mycobacterium tuberculosis hypothetical 16.9 kDp protein MTCY24A1.13c%2C 162 aa%3B fasta scores: opt: 242 z-score: 266.6 E(): 2.2e-07%3B 38.9%25 identity in 144 aa overlap;gbkey=CDS;gene=SC5H4.25c;product=hypothetical protein;protein_id=NP_629829.1;transl_table=11
NC_003888.3	RefSeq	gene	6213362	6213925	.	-	.	ID=gene5761;Dbxref=GeneID:1101141;Name=SC5H4.26c;gbkey=Gene;gene=SC5H4.26c;gene_biotype=protein_coding;gene_synonym=SC5H4.26c;locus_tag=SCO5702
NC_003888.3	RefSeq	CDS	6213362	6213925	.	-	0	ID=cds5648;Parent=gene5761;Dbxref=Genbank:NP_629830.1,GeneID:1101141;Name=NP_629830.1;Note=SC5H4.26c%2C possible lipoprotein%2C len: 187 aa%3B similar to TR:O05816 (EMBL:Z95207) Mycobacterium tuberculosis hypothetical 17.7 kD protein MTCY24A1.14c%2C 181 aa%3B fasta scores: opt: 152 z-score: 161.9 E(): 0.15%3B 32.6%25 identity in 178 aa overlap. Contains possible N-terminal region signal peptide sequence and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC5H4.26c;product=lipoprotein;protein_id=NP_629830.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6213367	6213371	.	-	.	ID=id7450;Dbxref=GeneID:1101141;gbkey=RBS;gene=SC5H4.26c
NC_003888.3	RefSeq	sequence_feature	6213833	6213865	.	-	.	ID=id7451;Dbxref=GeneID:1101141;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC5H4.26c
NC_003888.3	RefSeq	ribosome_entry_site	6213934	6213938	.	-	.	ID=id7452;gbkey=RBS
NC_003888.3	RefSeq	repeat_region	6214012	6214165	.	+	.	ID=id7453;Note=7x degenerate repeat (C/A)(A/G)GC(G/A)GACC(A/G)(C/A)CGA(C/T)(G/C)A)(A/C)CGAG;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6214012	6214033	.	+	.	ID=id7454;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6214034	6214055	.	+	.	ID=id7455;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6214056	6214077	.	+	.	ID=id7456;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6214078	6214099	.	+	.	ID=id7457;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6214100	6214121	.	+	.	ID=id7458;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6214121	6214143	.	+	.	ID=id7459;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6214144	6214165	.	+	.	ID=id7460;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	6214324	6214329	.	+	.	ID=id7461;gbkey=RBS
NC_003888.3	RefSeq	gene	6214338	6214871	.	+	.	ID=gene5762;Dbxref=GeneID:1101142;Name=SC5H4.27;gbkey=Gene;gene=SC5H4.27;gene_biotype=protein_coding;gene_synonym=SC5H4.27;locus_tag=SCO5703
NC_003888.3	RefSeq	CDS	6214338	6214871	.	+	0	ID=cds5649;Parent=gene5762;Dbxref=Genbank:NP_629831.1,GeneID:1101142;Name=NP_629831.1;Note=in Streptococcus pneumoniae this gene was found to be essential%3B structure determination of the Streptococcus protein shows that it is similar to a number of other proteins;gbkey=CDS;gene=SC5H4.27;product=hypothetical protein;protein_id=NP_629831.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6214860	6214866	.	+	.	ID=id7462;Dbxref=GeneID:1101142;gbkey=RBS;gene=SC5H4.27
NC_003888.3	RefSeq	gene	6214874	6215896	.	+	.	ID=gene5763;Dbxref=GeneID:1101143;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;gene_synonym=SC5H4.28;locus_tag=SCO5704
NC_003888.3	RefSeq	CDS	6214874	6215896	.	+	0	ID=cds5650;Parent=gene5763;Dbxref=Genbank:NP_629832.1,GeneID:1101143;Name=NP_629832.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription elongation factor NusA;protein_id=NP_629832.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6215204	6215407	.	+	.	ID=id7463;Dbxref=GeneID:1101143;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 20.50%2C E-value 0.00046;gbkey=misc_feature;gene=nusA
NC_003888.3	RefSeq	sequence_feature	6215732	6215890	.	+	.	ID=id7464;Dbxref=GeneID:1101143;Note=Pfam match to entry PF00013 KH-domain%2C KH domain%2C score 26.60%2C E-value 1.2e-06;gbkey=misc_feature;gene=nusA
NC_003888.3	RefSeq	ribosome_entry_site	6215983	6215987	.	+	.	ID=id7465;gbkey=RBS
NC_003888.3	RefSeq	gene	6215999	6216304	.	+	.	ID=gene5764;Dbxref=GeneID:1101144;Name=SC5H4.29;gbkey=Gene;gene=SC5H4.29;gene_biotype=protein_coding;gene_synonym=SC5H4.29;locus_tag=SCO5705
NC_003888.3	RefSeq	CDS	6215999	6216304	.	+	0	ID=cds5651;Parent=gene5764;Dbxref=Genbank:NP_629833.1,GeneID:1101144;Name=NP_629833.1;Note=SC5H4.29%2C hypothetical protein%2C len: 101 aa%3B similar to SW:YLXR_BACSU (EMBL:Z18631) Bacillus subtilis hypothetical 10.4 kD protein in NusA-InfB intergenic region (ORF3) YlxR%2C 91 aa%3B fasta scores: opt: 130 z-score: 176.4 E(): 0.023%3B 29.7%25 identity in 91 aa overlap. Contains and match to Prosite entry;gbkey=CDS;gene=SC5H4.29;product=hypothetical protein;protein_id=NP_629833.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6216456	6216461	.	+	.	ID=id7466;gbkey=RBS
NC_003888.3	RefSeq	gene	6216466	6219567	.	+	.	ID=gene5765;Dbxref=GeneID:1101145;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;gene_synonym=SC5H4.30,SC9F2.10c;locus_tag=SCO5706
NC_003888.3	RefSeq	CDS	6216466	6219567	.	+	0	ID=cds5652;Parent=gene5765;Dbxref=Genbank:NP_733671.1,GeneID:1101145;Name=NP_733671.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=NP_733671.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6218041	6218967	.	+	.	ID=id7467;Dbxref=GeneID:1101145;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family%2C score 102.30%2C E-value 9.2e-27;gbkey=misc_feature;gene=infB
NC_003888.3	RefSeq	sequence_feature	6218068	6218091	.	+	.	ID=id7468;Dbxref=GeneID:1101145;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=infB
NC_003888.3	RefSeq	gene	6219719	6220012	.	+	.	ID=gene5766;Dbxref=GeneID:1101146;Name=SC9F2.09c;gbkey=Gene;gene=SC9F2.09c;gene_biotype=protein_coding;gene_synonym=SC9F2.09c;locus_tag=SCO5707
NC_003888.3	RefSeq	CDS	6219719	6220012	.	+	0	ID=cds5653;Parent=gene5766;Dbxref=Genbank:NP_629834.1,GeneID:1101146;Name=NP_629834.1;Note=SC9F2.09c%2C small conserved hypothetical protein%2C len: 97aa%3B similar to eg. TR:O33252 (EMBL:Z97559) hypothetical protein from Mycobacterium tuberculosis (97 aa) fasta scores%3B opt: 397%2C z-score: 552.5%2C E(): 1.8e-23%2C (64.9%25 identity in 97 aa overlap).;gbkey=CDS;gene=SC9F2.09c;product=hypothetical protein;protein_id=NP_629834.1;transl_table=11
NC_003888.3	RefSeq	gene	6220097	6220579	.	+	.	ID=gene5767;Dbxref=GeneID:1101147;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;gene_synonym=SC9F2.08c;locus_tag=SCO5708
NC_003888.3	RefSeq	CDS	6220097	6220579	.	+	0	ID=cds5654;Parent=gene5767;Dbxref=Genbank:NP_629835.1,GeneID:1101147;Name=NP_629835.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=NP_629835.1;transl_table=11
NC_003888.3	RefSeq	gene	6220576	6221481	.	+	.	ID=gene5768;Dbxref=GeneID:1101148;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;gene_synonym=SC9F2.07c;locus_tag=SCO5709
NC_003888.3	RefSeq	CDS	6220576	6221481	.	+	0	ID=cds5655;Parent=gene5768;Dbxref=Genbank:NP_629836.1,GeneID:1101148;Name=NP_629836.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=NP_629836.1;transl_table=11
NC_003888.3	RefSeq	gene	6221737	6225837	.	+	.	ID=gene5769;Dbxref=GeneID:1101149;Name=SC9F2.06c;gbkey=Gene;gene=SC9F2.06c;gene_biotype=protein_coding;gene_synonym=SC9F2.06c;locus_tag=SCO5710
NC_003888.3	RefSeq	CDS	6221737	6225837	.	+	0	ID=cds5656;Parent=gene5769;Dbxref=Genbank:NP_629837.1,GeneID:1101149;Name=NP_629837.1;Note=SC9F2.06c%2C large Pro/Ala/Gly-rich protein of unknown function%2C len: 1366 aa;gbkey=CDS;gene=SC9F2.06c;product=large Pro/Ala/Gly-rich protein;protein_id=NP_629837.1;transl_table=11
NC_003888.3	RefSeq	gene	6225981	6226937	.	+	.	ID=gene5770;Dbxref=GeneID:1101150;Name=ribC;gbkey=Gene;gene=ribC;gene_biotype=protein_coding;gene_synonym=ribC,ribF;locus_tag=SCO5711
NC_003888.3	RefSeq	CDS	6225981	6226937	.	+	0	ID=cds5657;Parent=gene5770;Dbxref=Genbank:NP_629838.1,GeneID:1101150;Name=NP_629838.1;Note=catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN%3B in Bacillus the ribC gene has both flavokinase and FAD synthetase activities;gbkey=CDS;gene=ribC;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=NP_629838.1;transl_table=11
NC_003888.3	RefSeq	gene	6227052	6228131	.	-	.	ID=gene5771;Dbxref=GeneID:1101151;Name=SC9F2.04;gbkey=Gene;gene=SC9F2.04;gene_biotype=protein_coding;gene_synonym=SC9F2.04;locus_tag=SCO5712
NC_003888.3	RefSeq	CDS	6227052	6228131	.	-	0	ID=cds5658;Parent=gene5771;Dbxref=Genbank:NP_629839.1,GeneID:1101151;Name=NP_629839.1;gbkey=CDS;gene=SC9F2.04;product=ABC transporter ATP-binding protein;protein_id=NP_629839.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6227373	6227942	.	-	.	ID=id7469;Dbxref=GeneID:1101151;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 212.90%2C E-value 4.7e-60;gbkey=misc_feature;gene=SC9F2.04
NC_003888.3	RefSeq	sequence_feature	6227559	6227603	.	-	.	ID=id7470;Dbxref=GeneID:1101151;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC9F2.04
NC_003888.3	RefSeq	sequence_feature	6227898	6227921	.	-	.	ID=id7471;Dbxref=GeneID:1101151;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC9F2.04
NC_003888.3	RefSeq	gene	6228128	6229324	.	-	.	ID=gene5772;Dbxref=GeneID:1101152;Name=SC9F2.03;gbkey=Gene;gene=SC9F2.03;gene_biotype=protein_coding;gene_synonym=SC9F2.03;locus_tag=SCO5713
NC_003888.3	RefSeq	CDS	6228128	6229324	.	-	0	ID=cds5659;Parent=gene5772;Dbxref=Genbank:NP_629840.1,GeneID:1101152;Name=NP_629840.1;gbkey=CDS;gene=SC9F2.03;product=ABC transporter ATP-binding protein;protein_id=NP_629840.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6228653	6229237	.	-	.	ID=id7472;Dbxref=GeneID:1101152;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 197.30%2C E-value 2.3e-55;gbkey=misc_feature;gene=SC9F2.03
NC_003888.3	RefSeq	sequence_feature	6228839	6228883	.	-	.	ID=id7473;Dbxref=GeneID:1101152;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC9F2.03
NC_003888.3	RefSeq	sequence_feature	6229193	6229216	.	-	.	ID=id7474;Dbxref=GeneID:1101152;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC9F2.03
NC_003888.3	RefSeq	gene	6229321	6230274	.	-	.	ID=gene5773;Dbxref=GeneID:1101153;Name=SC9F2.02;gbkey=Gene;gene=SC9F2.02;gene_biotype=protein_coding;gene_synonym=SC9F2.02;locus_tag=SCO5714
NC_003888.3	RefSeq	CDS	6229321	6230274	.	-	0	ID=cds5660;Parent=gene5773;Dbxref=Genbank:NP_629841.1,GeneID:1101153;Name=NP_629841.1;Note=SC9F2.02%2C possible peptide transport permease%2C len: 317aa%3B similar to many (confirmed and proposed) eg. SW:APPC_BACSU oligopeptide transport permease%2C AppC%2C from Bacillus subtilis (303 aa) fasta scores%3B opt: 638%2C z-score: 718.2%2C E(): 1.1e-32%2C (36.5%25 identity in 277 aa overlap). Contains probable membrane spanning hydrophobic regions. Also contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 42.30%2C E-value 1.1e-08.;gbkey=CDS;gene=SC9F2.02;product=peptide transport permease;protein_id=NP_629841.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6229459	6229680	.	-	.	ID=id7475;Dbxref=GeneID:1101153;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 42.30%2C E-value 1.1e-08;gbkey=misc_feature;gene=SC9F2.02
NC_003888.3	RefSeq	gene	6230271	6231227	.	-	.	ID=gene5774;Dbxref=GeneID:1101154;Name=SC3C3.01c;gbkey=Gene;gene=SC3C3.01c;gene_biotype=protein_coding;gene_synonym=SC3C3.01c,SC9F2.01;locus_tag=SCO5715
NC_003888.3	RefSeq	CDS	6230271	6231227	.	-	0	ID=cds5661;Parent=gene5774;Dbxref=Genbank:NP_733672.1,GeneID:1101154;Name=NP_733672.1;Note=SC3C3.01c%2C probable peptide transport system integral membrane protein%2C partial CDS%2C len: >229 aa%3B similar to many e.g. DPPB_ECOLI dipeptide transport system permease (339 aa)%2C fasta scores%3B opt: 359 z-score: 654.6 E(): 3.3e-29%2C 35.3%25 identity in 238 aa overlap. Also similar to S. coelicolor SC2A11.12 (E(): 5.6e-12%2C 30.7%25 identity in 244 aa overlap)~SC9F2.01%2C partial CDS%2C possible peptide transport system permease%2C len:>140aa%3B constitutes the C-terminal half of a CDS whose N-terminal region (TR:O86635) lies on Streptomyces coelicolor cosmid SC3C3 (EMBL:AL031231). Similar to many dipeptide transport system permeases (confirmed and proposed) eg. SW:DPPB_ECOLI dipeptide transport system permease%2C DppB%2C from Escherichia coli (339 aa) fasta scores%3B opt: 391%2C z-score: 499.6%2C E(): 1.6e-20%2C (43.8%25 identity in 137 aa overlap). Contains probable membrane spanning hydrophobic regions. Also contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 24.30%2C E-value 0.0029.;gbkey=CDS;gene=SC3C3.01c;product=peptide transport system permease;protein_id=NP_733672.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6230389	6230606	.	-	.	ID=id7476;Dbxref=GeneID:1101154;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 24.30%2C E-value 0.0029;gbkey=misc_feature;gene=SC3C3.01c
NC_003888.3	RefSeq	gene	6231310	6233175	.	-	.	ID=gene5775;Dbxref=GeneID:1101155;Name=SC3C3.02c;gbkey=Gene;gene=SC3C3.02c;gene_biotype=protein_coding;gene_synonym=SC3C3.02c;locus_tag=SCO5716
NC_003888.3	RefSeq	CDS	6231310	6233175	.	-	0	ID=cds5662;Parent=gene5775;Dbxref=Genbank:NP_629842.1,GeneID:1101155;Name=NP_629842.1;Note=SC3C3.02c%2C probable peptide transport system  peptide binding protein%2C len: 621 aa%3B similar to e.g. DPPA_ECOLI periplasmic dipeptide transport protein precursor (535 aa)%2C fasta scores%3B opt: 195 z-score: 391.5 E(): 1.5e-14%2C 26.4%25 identity in 550 aa overlap. Contains N-terminals signal sequence%2C possible membrane anchor at C-terminus and Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 48.60%2C E-value 1.1e-11;gbkey=CDS;gene=SC3C3.02c;product=peptide transport system peptide binding protein;protein_id=NP_629842.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6231571	6231717	.	-	.	ID=id7477;Dbxref=GeneID:1101155;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 48.60%2C E-value 1.1e-11;gbkey=misc_feature;gene=SC3C3.02c
NC_003888.3	RefSeq	ribosome_entry_site	6233185	6233189	.	-	.	ID=id7478;Note=possible RBS upstream of SC3C3.02;gbkey=RBS
NC_003888.3	RefSeq	gene	6233478	6236729	.	-	.	ID=gene5776;Dbxref=GeneID:1101156;Name=SC3C3.03c;gbkey=Gene;gene=SC3C3.03c;gene_biotype=protein_coding;gene_synonym=SC3C3.03c;locus_tag=SCO5717
NC_003888.3	RefSeq	CDS	6233478	6236729	.	-	0	ID=cds5663;Parent=gene5776;Dbxref=Genbank:NP_629843.1,GeneID:1101156;Name=NP_629843.1;Note=SC3C3.03c%2C unknown%2C len: 1083 aa%3B contains three large Pro- and Pro-Gln rich regions: the segment between the central and C-terminal Pro-Gln rich regions is similar to hypothetical proteins from Mycobacteria which also contain Pro-rich domains%3B e.g. M. tuberculosis TR:E1264127 (EMBL:AL022120) RV3876 (666 aa)%2C fasta scores%3B opt: 945 z-score: 387.0 E(): 2.7e-14%2C 31.2%25 identity in 693 aa overlap;gbkey=CDS;gene=SC3C3.03c;product=hypothetical protein;protein_id=NP_629843.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6236734	6236739	.	-	.	ID=id7479;Note=possible RBS upstream of SC3C3.03c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6237198	6237201	.	+	.	ID=id7480;Note=possible RBS upstream of SC3C3.04;gbkey=RBS
NC_003888.3	RefSeq	gene	6237208	6238782	.	+	.	ID=gene5777;Dbxref=GeneID:1101157;Name=SC3C3.04;gbkey=Gene;gene=SC3C3.04;gene_biotype=protein_coding;gene_synonym=SC3C3.04;locus_tag=SCO5718
NC_003888.3	RefSeq	CDS	6237208	6238782	.	+	0	ID=cds5664;Parent=gene5777;Dbxref=Genbank:NP_629844.1,GeneID:1101157;Name=NP_629844.1;Note=SC3C3.04%2C hypothetical protein%2C len: 524 aa%3B may contain N-terminal signal sequence with long leader;gbkey=CDS;gene=SC3C3.04;product=hypothetical protein;protein_id=NP_629844.1;transl_table=11
NC_003888.3	RefSeq	gene	6238820	6239620	.	-	.	ID=gene5778;Dbxref=GeneID:1101158;Name=SC3C3.05c;gbkey=Gene;gene=SC3C3.05c;gene_biotype=protein_coding;gene_synonym=SC3C3.05c;locus_tag=SCO5719
NC_003888.3	RefSeq	CDS	6238820	6239620	.	-	0	ID=cds5665;Parent=gene5778;Dbxref=Genbank:NP_629845.1,GeneID:1101158;Name=NP_629845.1;Note=SC3C3.05c%2C unknown%2C len: 266 aa;gbkey=CDS;gene=SC3C3.05c;product=hypothetical protein;protein_id=NP_629845.1;transl_table=11
NC_003888.3	RefSeq	gene	6239617	6240885	.	-	.	ID=gene5779;Dbxref=GeneID:1101159;Name=SC3C3.06c;gbkey=Gene;gene=SC3C3.06c;gene_biotype=protein_coding;gene_synonym=SC3C3.06c;locus_tag=SCO5720
NC_003888.3	RefSeq	CDS	6239617	6240885	.	-	0	ID=cds5666;Parent=gene5779;Dbxref=Genbank:NP_629846.1,GeneID:1101159;Name=NP_629846.1;Note=SC3C3.06c%2C possible membrane protein%2C len: 422 aa%3B contains two possible transmembrane domains at N-terminus;gbkey=CDS;gene=SC3C3.06c;product=hypothetical protein;protein_id=NP_629846.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6241054	6241057	.	+	.	ID=id7481;Note=possible RBS upstream of SC3C3.07;gbkey=RBS
NC_003888.3	RefSeq	gene	6241070	6242596	.	+	.	ID=gene5780;Dbxref=GeneID:1101160;Name=SC3C3.07;gbkey=Gene;gene=SC3C3.07;gene_biotype=protein_coding;gene_synonym=SC3C3.07;locus_tag=SCO5721
NC_003888.3	RefSeq	CDS	6241070	6242596	.	+	0	ID=cds5667;Parent=gene5780;Dbxref=Genbank:NP_629847.1,GeneID:1101160;Name=NP_629847.1;Note=SC3C3.07%2C unknown%2C len: 508 aa%3B similar to three hypothetical proteins from M. tuberculosis e.g. TR:O06317 (EMBL:Z95390) MTCY13E12.03C (470 aa)%2C fasta scores%3B opt: 213 z-score: 330.7 E(): 3.7e-11%2C 28.0%25 identity in 508 aa overlap. Contains possible transmembrane domain at N-terminus;gbkey=CDS;gene=SC3C3.07;product=hypothetical protein;protein_id=NP_629847.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6242653	6242657	.	+	.	ID=id7482;Note=possible RBS upstream of SC3C3.08;gbkey=RBS
NC_003888.3	RefSeq	gene	6242668	6243909	.	+	.	ID=gene5781;Dbxref=GeneID:1101161;Name=SC3C3.08;gbkey=Gene;gene=SC3C3.08;gene_biotype=protein_coding;gene_synonym=SC3C3.08;locus_tag=SCO5722
NC_003888.3	RefSeq	CDS	6242668	6243909	.	+	0	ID=cds5668;Parent=gene5781;Dbxref=Genbank:NP_629848.1,GeneID:1101161;Name=NP_629848.1;Note=SC3C3.08%2C serine protease (hypothetical protein)%2C len: 413 aa%3B almost identical to TR:Q53863 (EMBL:U33176) serine protease (390 aa)%2C 98.4%25 identity in 387 aa overlap and similar to many e.g. ELYA_BACSP alkaline elastase yab precursor (378 aa)%2C fasta scores%3B opt: 466 z-score: 512.6 E(): 2.7e-21%2C 36.3%25 identity in 281 aa overlap. Also similar to downstream serine protease%2C SC3C3.17c (E(): 5.2e-07%2C 35.0%25 identity in 383 aa overlap). Contains PS00136%2C PS00137 and PS00138 Serine proteases%2C subtilase family%2C aspartic acid%2C histidine and serine active sites and Pfam match to entry PF00082 subtilase%2C Subtilase family of serine proteases%2C score 214.90%2C E-value 1.2e-60. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning region at C-terminal region;gbkey=CDS;gene=SC3C3.08;product=serine protease;protein_id=NP_629848.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6242818	6243627	.	+	.	ID=id7483;Dbxref=GeneID:1101161;Note=Pfam match to entry PF00082 subtilase%2C Subtilase family of serine proteases%2C score 214.90%2C E-value 1.2e-60;gbkey=misc_feature;gene=SC3C3.08
NC_003888.3	RefSeq	sequence_feature	6242914	6242949	.	+	.	ID=id7484;Dbxref=GeneID:1101161;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SC3C3.08
NC_003888.3	RefSeq	sequence_feature	6243040	6243072	.	+	.	ID=id7485;Dbxref=GeneID:1101161;Note=PS00137 Serine proteases%2C subtilase family%2C histidine active site;gbkey=misc_feature;gene=SC3C3.08
NC_003888.3	RefSeq	sequence_feature	6243514	6243546	.	+	.	ID=id7486;Dbxref=GeneID:1101161;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site;gbkey=misc_feature;gene=SC3C3.08
NC_003888.3	RefSeq	sequence_feature	6243938	6244579	.	-	.	ID=id7487;Note=98.9%25 match to SC28930 U28930 Streptomyces coelicolor (bldB) gene%2C from 1 to 640;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6243938	6244234	.	-	.	ID=gene5782;Dbxref=GeneID:1101162;Name=bldB;gbkey=Gene;gene=bldB;gene_biotype=protein_coding;gene_synonym=bldB,SC3C3.09c;locus_tag=SCO5723
NC_003888.3	RefSeq	CDS	6243938	6244234	.	-	0	ID=cds5669;Parent=gene5782;Dbxref=Genbank:NP_629849.1,GeneID:1101162;Name=NP_629849.1;Note=SC3C3.09c%2C possible regulator%2C BldB%2C len: 98 aa%3B identical to TR:Q53842 (EMBL:U28930) bldB (98 aa) and similar to S. coelicolor TR:Q53896 (EMBL:X60316) AbaA ORFD (75 aa)%2C fasta scores%3B opt: 150 z-score: 201.9 E(): 0.00055%2C 47.4%25 identity in 57 aa overlap;gbkey=CDS;gene=bldB;product=regulator%2C BldB;protein_id=NP_629849.1;transl_table=11
NC_003888.3	RefSeq	gene	6244538	6244912	.	+	.	ID=gene5783;Dbxref=GeneID:1101163;Name=SC3C3.10;gbkey=Gene;gene=SC3C3.10;gene_biotype=protein_coding;gene_synonym=SC3C3.10;locus_tag=SCO5724
NC_003888.3	RefSeq	CDS	6244538	6244912	.	+	0	ID=cds5670;Parent=gene5783;Dbxref=Genbank:NP_629850.1,GeneID:1101163;Name=NP_629850.1;Note=SC3C3.10%2C unknown%2C len: 124 aa;gbkey=CDS;gene=SC3C3.10;product=hypothetical protein;protein_id=NP_629850.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6244626	6245053	.	+	.	ID=id7488;Note=99%25 match to SC33195 U33195 Streptomyces coelicolor truncated orfX near bldB gene%2C from 33 to 459.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6244935	6244939	.	+	.	ID=id7489;Note=possible RBS upstream of SC3C3.11;gbkey=RBS
NC_003888.3	RefSeq	gene	6244949	6245260	.	+	.	ID=gene5784;Dbxref=GeneID:1101164;Name=SC3C3.11;gbkey=Gene;gene=SC3C3.11;gene_biotype=protein_coding;gene_synonym=SC3C3.11;locus_tag=SCO5725
NC_003888.3	RefSeq	CDS	6244949	6245260	.	+	0	ID=cds5671;Parent=gene5784;Dbxref=Genbank:NP_629851.1,GeneID:1101164;Name=NP_629851.1;Note=SC3C3.11%2C unknown%2C len: 103 aa;gbkey=CDS;gene=SC3C3.11;product=hypothetical protein;protein_id=NP_629851.1;transl_table=11
NC_003888.3	RefSeq	gene	6245381	6245860	.	+	.	ID=gene5785;Dbxref=GeneID:1101165;Name=SC3C3.12;gbkey=Gene;gene=SC3C3.12;gene_biotype=protein_coding;gene_synonym=SC3C3.12;locus_tag=SCO5726
NC_003888.3	RefSeq	CDS	6245381	6245860	.	+	0	ID=cds5672;Parent=gene5785;Dbxref=Genbank:NP_629852.1,GeneID:1101165;Name=NP_629852.1;Note=SC3C3.12%2C unknown%2C len: 159 aa;gbkey=CDS;gene=SC3C3.12;product=hypothetical protein;protein_id=NP_629852.1;transl_table=11
NC_003888.3	RefSeq	gene	6245884	6246486	.	+	.	ID=gene5786;Dbxref=GeneID:1101166;Name=SC3C3.13;gbkey=Gene;gene=SC3C3.13;gene_biotype=protein_coding;gene_synonym=SC3C3.13;locus_tag=SCO5727
NC_003888.3	RefSeq	CDS	6245884	6246486	.	+	0	ID=cds5673;Parent=gene5786;Dbxref=Genbank:NP_629853.1,GeneID:1101166;Name=NP_629853.1;Note=SC3C3.13%2C unknown%2C len: 200 aa;gbkey=CDS;gene=SC3C3.13;product=hypothetical protein;protein_id=NP_629853.1;transl_table=11
NC_003888.3	RefSeq	gene	6246517	6247155	.	-	.	ID=gene5787;Dbxref=GeneID:1101167;Name=SC3C3.14c;gbkey=Gene;gene=SC3C3.14c;gene_biotype=protein_coding;gene_synonym=SC3C3.14c;locus_tag=SCO5728
NC_003888.3	RefSeq	CDS	6246517	6247155	.	-	0	ID=cds5674;Parent=gene5787;Dbxref=Genbank:NP_629854.1,GeneID:1101167;Name=NP_629854.1;Note=SC3C3.14c%2C probable hypothetical protein%2C len: 212 aa%3B contains N-terminal signal sequence;gbkey=CDS;gene=SC3C3.14c;product=hypothetical protein;protein_id=NP_629854.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6247162	6247165	.	-	.	ID=id7490;Note=possible RBS upstream of SC3C3.14c;gbkey=RBS
NC_003888.3	RefSeq	gene	6247184	6249421	.	-	.	ID=gene5788;Dbxref=GeneID:1101168;Name=SC3C3.15c;gbkey=Gene;gene=SC3C3.15c;gene_biotype=protein_coding;gene_synonym=SC3C3.15c;locus_tag=SCO5729
NC_003888.3	RefSeq	CDS	6247184	6249421	.	-	0	ID=cds5675;Parent=gene5788;Dbxref=Genbank:NP_629855.1,GeneID:1101168;Name=NP_629855.1;Note=SC3C3.15c%2C hypothetical protein%2C len: 745 aa%3B similar to TR:Q9AFG1 (EMBL:AF349618) Streptomyces ansochromogenes AG2 protein%2C 760 aa%3B fasta scores: pt: 640 Z-score: 664.3 E(): 2.3e-29%3B 29.462%25 identity in 706 aa overlap;gbkey=CDS;gene=SC3C3.15c;product=hypothetical protein;protein_id=NP_629855.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6248734	6248737	.	+	.	ID=id7491;Note=end of true overlap with cosmid St9F2;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6249423	6249845	.	-	.	ID=gene5789;Dbxref=GeneID:1101169;Name=SC3C3.16c;gbkey=Gene;gene=SC3C3.16c;gene_biotype=protein_coding;gene_synonym=SC3C3.16c;locus_tag=SCO5730
NC_003888.3	RefSeq	CDS	6249423	6249845	.	-	0	ID=cds5676;Parent=gene5789;Dbxref=Genbank:NP_629856.1,GeneID:1101169;Name=NP_629856.1;Note=SC3C3.16c%2C unknown%2C len: 140 aa;gbkey=CDS;gene=SC3C3.16c;product=hypothetical protein;protein_id=NP_629856.1;transl_table=11
NC_003888.3	RefSeq	gene	6249911	6251263	.	-	.	ID=gene5790;Dbxref=GeneID:1101170;Name=SC3C3.17c;gbkey=Gene;gene=SC3C3.17c;gene_biotype=protein_coding;gene_synonym=SC3C3.17c;locus_tag=SCO5731
NC_003888.3	RefSeq	CDS	6249911	6251263	.	-	0	ID=cds5677;Parent=gene5790;Dbxref=Genbank:NP_629857.1,GeneID:1101170;Name=NP_629857.1;Note=SC3C3.17c%2C possible  serine protease%2C len: 450 aa%3B similar in part to many e.g. SUBT_BACSU subtilisin E precursor (381 aa)%2C fasta scores%3B opt: 321 z-score: 359.3 E(): 9.4e-13%2C 32.3%25 identity in 294 aa overlap. Also similar to downstream serine protease%2C SC3C3.08 (E(): 7.1e-07%2C 35.0%25 identity in 383 aa overlap). Contains N-terminal signal sequence%2C possible transmembrane domain at C-terminus and Pfam match to entry PF00082 subtilase%2C Subtilase family of serine proteases%2C score 151.00%2C E-value 2.1e-41;gbkey=CDS;gene=SC3C3.17c;product=serine protease;protein_id=NP_629857.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6250349	6251179	.	-	.	ID=id7492;Dbxref=GeneID:1101170;Note=Pfam match to entry PF00082 subtilase%2C Subtilase family of serine proteases%2C score 151.00%2C E-value 2.1e-41;gbkey=misc_feature;gene=SC3C3.17c
NC_003888.3	RefSeq	gene	6251294	6252847	.	-	.	ID=gene5791;Dbxref=GeneID:1101171;Name=SC3C3.18c;gbkey=Gene;gene=SC3C3.18c;gene_biotype=protein_coding;gene_synonym=SC3C3.18c;locus_tag=SCO5732
NC_003888.3	RefSeq	CDS	6251294	6252847	.	-	0	ID=cds5678;Parent=gene5791;Dbxref=Genbank:NP_629858.1,GeneID:1101171;Name=NP_629858.1;Note=SC3C3.18c%2C unknown%2C len: 517 aa%3B C-terminus is Gly-Pro-rich%2C and is predicted to be non-coding by FramePlot;gbkey=CDS;gene=SC3C3.18c;product=hypothetical protein;protein_id=NP_629858.1;transl_table=11
NC_003888.3	RefSeq	gene	6252847	6253335	.	-	.	ID=gene5792;Dbxref=GeneID:1101172;Name=SC3C3.19c;gbkey=Gene;gene=SC3C3.19c;gene_biotype=protein_coding;gene_synonym=SC3C3.19c;locus_tag=SCO5733
NC_003888.3	RefSeq	CDS	6252847	6253335	.	-	0	ID=cds5679;Parent=gene5792;Dbxref=Genbank:NP_629859.1,GeneID:1101172;Name=NP_629859.1;Note=SC3C3.19c%2C unknown%2C len: 162 aa;gbkey=CDS;gene=SC3C3.19c;product=hypothetical protein;protein_id=NP_629859.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6252855	6252858	.	-	.	ID=id7493;Dbxref=GeneID:1101172;Note=possible RBS upstream of SC3C3.18c;gbkey=RBS;gene=SC3C3.19c
NC_003888.3	RefSeq	gene	6253407	6257372	.	-	.	ID=gene5793;Dbxref=GeneID:1101173;Name=SC3C3.20c;gbkey=Gene;gene=SC3C3.20c;gene_biotype=protein_coding;gene_synonym=SC3C3.20c;locus_tag=SCO5734
NC_003888.3	RefSeq	CDS	6253407	6257372	.	-	0	ID=cds5680;Parent=gene5793;Dbxref=Genbank:NP_629860.1,GeneID:1101173;Name=NP_629860.1;Note=SC3C3.20c%2C unknown ATP/GTP binding protein ( membrane protein)%2C len: 1321 aa%3B similar to several in M. tuberculosis and M. leprae e.g. M. tuberculosis TR:O06264 (EMBL:Z95389) MTCY77.19c%2C Rv3447c (1236 aa)%2C fasta scores%3B opt: 1186 z-score: 3117.9 E(): 0%2C 42.9%25 identity in 1312 aa overlap. Contains 3x%2C PS00017 ATP /GTP-binding site motif A (P-loop)%2C and a possible transmembrane domain near the C-terminus;gbkey=CDS;gene=SC3C3.20c;product=ATP/GTP binding protein membrane protein;protein_id=NP_629860.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6253995	6254018	.	-	.	ID=id7494;Dbxref=GeneID:1101173;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3C3.20c
NC_003888.3	RefSeq	sequence_feature	6254853	6254876	.	-	.	ID=id7495;Dbxref=GeneID:1101173;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3C3.20c
NC_003888.3	RefSeq	sequence_feature	6255930	6255953	.	-	.	ID=id7496;Dbxref=GeneID:1101173;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3C3.20c
NC_003888.3	RefSeq	ribosome_entry_site	6257378	6257381	.	-	.	ID=id7497;Note=possible RBS upstream of SC3C3.20c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6257521	6257527	.	+	.	ID=id7498;Note=possible RBS upstream of SC3C3.21;gbkey=RBS
NC_003888.3	RefSeq	gene	6257530	6259005	.	+	.	ID=gene5794;Dbxref=GeneID:1101174;Name=SC3C3.21;gbkey=Gene;gene=SC3C3.21;gene_biotype=protein_coding;gene_synonym=SC3C3.21;locus_tag=SCO5735
NC_003888.3	RefSeq	CDS	6257530	6259005	.	+	0	ID=cds5681;Parent=gene5794;Dbxref=Genbank:NP_629861.1,GeneID:1101174;Name=NP_629861.1;Note=SC3C3.21%2C probable integral membrane protein%2C len: 491 aa%3B similar to hypothetical membrane protein from M. tuberculosis TR:O06265 (EMBL:Z95389) MTCY77.20 Rv3448 (467 aa)%2C fasta scores%3B opt: 192 z-score: 322.0 E(): 1.1e-10%2C 26.9%25 identity in 495 aa overlap;gbkey=CDS;gene=SC3C3.21;product=hypothetical protein;protein_id=NP_629861.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6259193	6259197	.	+	.	ID=id7499;Note=possible RBS upstream of rpsO;gbkey=RBS
NC_003888.3	RefSeq	gene	6259203	6259490	.	+	.	ID=gene5795;Dbxref=GeneID:1101175;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=SCO5736
NC_003888.3	RefSeq	CDS	6259203	6259490	.	+	0	ID=cds5682;Parent=gene5795;Dbxref=Genbank:NP_629862.1,GeneID:1101175;Name=NP_629862.1;Note=primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence;gbkey=CDS;gene=rpsO;product=30S ribosomal protein S15;protein_id=NP_629862.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6259269	6259466	.	+	.	ID=id7500;Dbxref=GeneID:1101175;Note=Pfam match to entry PF00312 S15%2C Ribosomal protein S15%2C score 100.10%2C E-value 6.1e-27;gbkey=misc_feature;gene=rpsO
NC_003888.3	RefSeq	sequence_feature	6259317	6259409	.	+	.	ID=id7501;Dbxref=GeneID:1101175;Note=PS00362 Ribosomal protein S15 signature;gbkey=misc_feature;gene=rpsO
NC_003888.3	RefSeq	sequence_feature	6259655	6261921	.	+	.	ID=id7502;Note=93%25 match to SA19858 U19858 Streptomyces antibioticus guanosine pentaphosphate synthetase (gpsI) gene from 319 to 2570;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6259773	6261992	.	+	.	ID=gene5796;Dbxref=GeneID:1101176;Name=gpsI;gbkey=Gene;gene=gpsI;gene_biotype=protein_coding;gene_synonym=gpsI;locus_tag=SCO5737
NC_003888.3	RefSeq	CDS	6259773	6261992	.	+	0	ID=cds5683;Parent=gene5796;Dbxref=Genbank:NP_733673.1,GeneID:1101176;Name=NP_733673.1;Note=SC3C3.23%2C gpsI%2C guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase%2C partial CDS%2C len: >716 aa%3B almost identical to Streptomyces antibioticus GpsI TR:Q53597 (EMBL:U19858) guanosine pentaphosphate synthetase (740 aa)%2C 93.6%25 identity in 715 aa overlap. Contains Pfam match to entry PF00013 KH-domain%2C KH domain family of RNA binding proteins%2C score 27.40%2C E-value 0.00033 and Pfam match to entry PF00575 S1%2C S1 RNA binding LACR_STAAU motif%2C score 28.80%2C E-value 0.00013~SC9A10.01%2C gpsI%2C guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase%2C partial CDS%2C len: >57 aa%3B almost identical to Streptomyces antibioticus GpsI TR:Q53597 (EMBL:U19858) guanosine pentaphosphate synthetase (740 aa)%2C 87.9%25 identity in 58 aa overlap. Overlaps and extends SC3C3.23.;gbkey=CDS;gene=gpsI;product=polynucleotide phosphorylase/polyadenylase;protein_id=NP_733673.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6261522	6261650	.	+	.	ID=id7503;Dbxref=GeneID:1101176;Note=Pfam match to entry PF00013 KH-domain%2C KH domain family of RNA binding proteins.%2C score 27.40%2C E-value 0.00033;gbkey=misc_feature;gene=gpsI
NC_003888.3	RefSeq	sequence_feature	6261711	6261920	.	+	.	ID=id7504;Dbxref=GeneID:1101176;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding LACR_STAAUmotif%2C score 28.80%2C E-value 0.00013;gbkey=misc_feature;gene=gpsI
NC_003888.3	RefSeq	ribosome_entry_site	6261972	6261976	.	+	.	ID=id7505;Dbxref=GeneID:1101176;Note=possible RBS upstream of SC9A10.02;gbkey=RBS;gene=gpsI
NC_003888.3	RefSeq	gene	6261989	6263368	.	+	.	ID=gene5797;Dbxref=GeneID:1101177;Name=SC9A10.02;gbkey=Gene;gene=SC9A10.02;gene_biotype=protein_coding;gene_synonym=SC9A10.02;locus_tag=SCO5738
NC_003888.3	RefSeq	CDS	6261989	6263368	.	+	0	ID=cds5684;Parent=gene5797;Dbxref=Genbank:NP_629863.1,GeneID:1101177;Name=NP_629863.1;Note=SC9A10.02%2C probable protease%2C len: 459 aa%3B similar to members of the insulinase family e.g. YMXG_BACSU hypothetical processing protease (409 aa)%2C fasta scores%3B opt: 648 z-score: 1449.2 E(): 0%2C 39.7%25 identity in 413 aa overlap and MPP2_YEAST mitochondrial processing peptidase beta subunit (462 aa)%2C fasta scores%3B opt: 583 z-score: 864.6 E(): 0%2C 29.7%25 identity in 448 aa overlap. Alternative start possible at aa 36. Contains PS00143 Insulinase family%2C zinc-binding region signature and Pfam match to entry PF00675 Insulinase%2C Insulinase (proteinase M16)%2C score 171.30%2C E-value 1.6e-47;gbkey=CDS;gene=SC9A10.02;product=protease;protein_id=NP_629863.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6262009	6262048	.	+	.	ID=id7506;Dbxref=GeneID:1101177;Note=hairpin loop with 18 /19 bp stem;gbkey=stem_loop;gene=SC9A10.02
NC_003888.3	RefSeq	sequence_feature	6262118	6262567	.	+	.	ID=id7507;Dbxref=GeneID:1101177;Note=Pfam match to entry PF00675 Insulinase%2C Insulinase (proteinase M16)%2C score 171.30%2C E-value 1.6e-47;gbkey=misc_feature;gene=SC9A10.02
NC_003888.3	RefSeq	sequence_feature	6262184	6262255	.	+	.	ID=id7508;Dbxref=GeneID:1101177;Note=PS00143 Insulinase family%2C zinc-binding region signature;gbkey=misc_feature;gene=SC9A10.02
NC_003888.3	RefSeq	ribosome_entry_site	6263379	6263383	.	+	.	ID=id7509;Note=possible RBS upstream of dapB;gbkey=RBS
NC_003888.3	RefSeq	gene	6263394	6264146	.	+	.	ID=gene5798;Dbxref=GeneID:1101178;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;gene_synonym=dapB;locus_tag=SCO5739
NC_003888.3	RefSeq	CDS	6263394	6264146	.	+	0	ID=cds5685;Parent=gene5798;Dbxref=Genbank:NP_629864.1,GeneID:1101178;Name=NP_629864.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;gene=dapB;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=NP_629864.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6263781	6263834	.	+	.	ID=id7510;Dbxref=GeneID:1101178;Note=PS01298 Dihydrodipicolinate reductase signature;gbkey=misc_feature;gene=dapB
NC_003888.3	RefSeq	gene	6264160	6264615	.	+	.	ID=gene5799;Dbxref=GeneID:1101179;Name=SC9A10.04;gbkey=Gene;gene=SC9A10.04;gene_biotype=protein_coding;gene_synonym=SC9A10.04;locus_tag=SCO5740
NC_003888.3	RefSeq	CDS	6264160	6264615	.	+	0	ID=cds5686;Parent=gene5799;Dbxref=Genbank:NP_629865.1,GeneID:1101179;Name=NP_629865.1;Note=SC9A10.04%2C possible membrane protein%2C len: 151 aa%3B similar to hypothetical proteins from Mycobacterium bovis and tuberculosis that follow dapB%2C e.g. YDAB_MYCBO hypothetical 19.3 kd protein in dapb 3'region (177 aa)%2C fasta scores%3B opt: 377 z-score: 696.1 E(): 1.7e-31%2C 47.1%25 identity in 136 aa overlap;gbkey=CDS;gene=SC9A10.04;product=hypothetical protein;protein_id=NP_629865.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6264624	6264681	.	+	.	ID=id7511;Note=hairpin loop with 29 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	sequence_feature	6264644	6264649	.	+	.	ID=id7512;Note=single clone coverage only;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6264691	6265245	.	-	.	ID=gene5800;Dbxref=GeneID:1101180;Name=SC9A10.05c;gbkey=Gene;gene=SC9A10.05c;gene_biotype=protein_coding;gene_synonym=SC9A10.05c;locus_tag=SCO5741
NC_003888.3	RefSeq	CDS	6264691	6265245	.	-	0	ID=cds5687;Parent=gene5800;Dbxref=Genbank:NP_629866.1,GeneID:1101180;Name=NP_629866.1;Note=SC9A10.05c%2C probable membrane protein%2C len: 184 aa;gbkey=CDS;gene=SC9A10.05c;product=hypothetical protein;protein_id=NP_629866.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6265252	6265255	.	-	.	ID=id7513;Note=possible RBS upstream of SC9A10.05c;gbkey=RBS
NC_003888.3	RefSeq	gene	6265362	6265601	.	-	.	ID=gene5801;Dbxref=GeneID:1101181;Name=SC9A10.06c;gbkey=Gene;gene=SC9A10.06c;gene_biotype=protein_coding;gene_synonym=SC9A10.06c;locus_tag=SCO5742
NC_003888.3	RefSeq	CDS	6265362	6265601	.	-	0	ID=cds5688;Parent=gene5801;Dbxref=Genbank:NP_629867.1,GeneID:1101181;Name=NP_629867.1;Note=SC9A10.06c%2C membrane protein%2C len: 79 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9A10.06c;product=hypothetical protein;protein_id=NP_629867.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6265613	6265616	.	-	.	ID=id7514;Note=possible RSBS upstream of SC9A10.06c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6265778	6265781	.	+	.	ID=id7515;Note=possible RBS upstream of SC9A10.08;gbkey=RBS
NC_003888.3	RefSeq	gene	6265793	6266533	.	+	.	ID=gene5802;Dbxref=GeneID:1101182;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;gene_synonym=SC9A10.07;locus_tag=SCO5743
NC_003888.3	RefSeq	CDS	6265793	6266533	.	+	0	ID=cds5689;Parent=gene5802;Dbxref=Genbank:NP_629868.1,GeneID:1101182;Name=NP_629868.1;Note=flavin dependent thymidylate synthase%3B ThyX%3B thymidylate synthase complementing protein%3B catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate%3B the enzyme from Mycobacterium tuberculosis forms homotetramers%3B uses FAD as a cofactor;gbkey=CDS;gene=thyX;product=FAD-dependent thymidylate synthase;protein_id=NP_629868.1;transl_table=11
NC_003888.3	RefSeq	gene	6266753	6267652	.	+	.	ID=gene5803;Dbxref=GeneID:1101183;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=SCO5744
NC_003888.3	RefSeq	CDS	6266753	6267652	.	+	0	ID=cds5690;Parent=gene5803;Dbxref=Genbank:NP_629869.1,GeneID:1101183;Name=NP_629869.1;Note=catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis;gbkey=CDS;gene=dapA;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=NP_629869.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6266843	6267592	.	+	.	ID=id7516;Dbxref=GeneID:1101183;Note=Pfam match to entry PF00701 DHDPS%2C Dihydrodipicolinate synthetase%2C score 351.50%2C E-value 9.2e-102;gbkey=misc_feature;gene=dapA
NC_003888.3	RefSeq	sequence_feature	6266891	6266944	.	+	.	ID=id7517;Dbxref=GeneID:1101183;Note=PS00665 Dihydrodipicolinate synthetase signature 1;gbkey=misc_feature;gene=dapA
NC_003888.3	RefSeq	ribosome_entry_site	6267794	6267798	.	+	.	ID=id7518;Note=possible RBS upstream of SC9A10.09;gbkey=RBS
NC_003888.3	RefSeq	gene	6267805	6269490	.	+	.	ID=gene5804;Dbxref=GeneID:1101184;Name=SC9A10.09;gbkey=Gene;gene=SC9A10.09;gene_biotype=protein_coding;gene_synonym=SC9A10.09;locus_tag=SCO5745
NC_003888.3	RefSeq	CDS	6267805	6269490	.	+	0	ID=cds5691;Parent=gene5804;Dbxref=Genbank:NP_629870.1,GeneID:1101184;Name=NP_629870.1;Note=SC9A10.09%2C unknown%2C len: 561 aa%3B similar to many members of the UPF0036 family e.g. YOR4_CORGL (645 aa)%2C fasta scores%3B opt: 1873 z-score: 1500.1 E(): 0%2C 55.6%25 identity in 493 aa overlap. Contains Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily%2C score 132.40%2C E-value 8.3e-36;gbkey=CDS;gene=SC9A10.09;product=hypothetical protein;protein_id=NP_629870.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6267865	6268479	.	+	.	ID=id7519;Dbxref=GeneID:1101184;Note=Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily%2C score 132.40%2C E-value 8.3e-36;gbkey=misc_feature;gene=SC9A10.09
NC_003888.3	RefSeq	stem_loop	6269520	6269563	.	+	.	ID=id7520;Note=hairpin loop with 20 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6269992	6271519	.	+	.	ID=gene5805;Dbxref=GeneID:1101185;Name=rrnE;gbkey=Gene;gene=rrnE;gene_biotype=rRNA;locus_tag=SCOr16
NC_003888.3	RefSeq	rRNA	6269992	6271519	.	+	.	ID=rna78;Parent=gene5805;Dbxref=GeneID:1101185;Note=16S rRNA gene%2C partial~16S rRNA gene%2C partial%2C approximate coordinates;gbkey=rRNA;gene=rrnE;product=16S ribosomal RNA
NC_003888.3	RefSeq	exon	6269992	6271519	.	+	.	ID=id7521;Parent=rna78;Dbxref=GeneID:1101185;Note=16S rRNA gene%2C partial~16S rRNA gene%2C partial%2C approximate coordinates;gbkey=rRNA;gene=rrnE;product=16S ribosomal RNA
NC_003888.3	RefSeq	gene	6271800	6274919	.	+	.	ID=gene5806;Dbxref=GeneID:1101186;Name=rrnE;gbkey=Gene;gene=rrnE;gene_biotype=rRNA;locus_tag=SCOr17
NC_003888.3	RefSeq	rRNA	6271800	6274919	.	+	.	ID=rna79;Parent=gene5806;Dbxref=GeneID:1101186;Note=23S rRNA gene%2C approximate coordinates;gbkey=rRNA;gene=rrnE;product=23S ribosomal RNA
NC_003888.3	RefSeq	exon	6271800	6274919	.	+	.	ID=id7522;Parent=rna79;Dbxref=GeneID:1101186;Note=23S rRNA gene%2C approximate coordinates;gbkey=rRNA;gene=rrnE;product=23S ribosomal RNA
NC_003888.3	RefSeq	gene	6275003	6275121	.	+	.	ID=gene5807;Dbxref=GeneID:1101187;Name=rrnE;gbkey=Gene;gene=rrnE;gene_biotype=rRNA;locus_tag=SCOr18
NC_003888.3	RefSeq	rRNA	6275003	6275121	.	+	.	ID=rna80;Parent=gene5807;Dbxref=GeneID:1101187;Note=5S rRNA%2C approximate coordinates;gbkey=rRNA;gene=rrnE;product=5S ribosomal RNA
NC_003888.3	RefSeq	exon	6275003	6275121	.	+	.	ID=id7523;Parent=rna80;Dbxref=GeneID:1101187;Note=5S rRNA%2C approximate coordinates;gbkey=rRNA;gene=rrnE;product=5S ribosomal RNA
NC_003888.3	RefSeq	stem_loop	6275131	6275174	.	+	.	ID=id7524;Note=possible rrnE operon transcriptional terminator%3B hairpin loop with 20 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6275223	6275900	.	+	.	ID=gene5808;Dbxref=GeneID:1101188;Name=SC7C7.01;gbkey=Gene;gene=SC7C7.01;gene_biotype=protein_coding;gene_synonym=SC7C7.01;locus_tag=SCO5746
NC_003888.3	RefSeq	CDS	6275223	6275900	.	+	0	ID=cds5692;Parent=gene5808;Dbxref=Genbank:NP_629871.1,GeneID:1101188;Name=NP_629871.1;Note=SC7C7.01%2C unknown%2C len: 225 aa%3B some similarity to hydrophobic region from B. subtilis DEGT_BACST pleiotropic regulatory protein (372 aa)%2C fasta scores%3B opt: 289 z-score: 450.7 E(): 7.2e-18%2C 51.7%25 identity in 89 aa overlap. Also similar to e.g. TR:P72452 (EMBL:Y00459) aminotransferase from Streptomyces griseus(378 aa)%2C fasta scores%3B opt: 250 z-score: 429.3 E(): 1.1e-16%2C 29.4%25 identity in 309 aa overlap;gbkey=CDS;gene=SC7C7.01;product=hypothetical protein;protein_id=NP_629871.1;transl_table=11
NC_003888.3	RefSeq	gene	6275983	6276058	.	+	.	ID=gene5809;Dbxref=GeneID:3240064;Name=SCOt61;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt61
NC_003888.3	RefSeq	tRNA	6275983	6276058	.	+	.	ID=rna81;Parent=gene5809;Dbxref=GeneID:3240064;Note=tRNA Thr%3B anticodon GGT;gbkey=tRNA;product=tRNA-Thr
NC_003888.3	RefSeq	exon	6275983	6276058	.	+	.	ID=id7525;Parent=rna81;Dbxref=GeneID:3240064;Note=tRNA Thr%3B anticodon GGT;gbkey=tRNA;product=tRNA-Thr
NC_003888.3	RefSeq	gene	6276106	6278856	.	-	.	ID=gene5810;Dbxref=GeneID:1101189;Name=SC7C7.02c;gbkey=Gene;gene=SC7C7.02c;gene_biotype=protein_coding;gene_synonym=SC7C7.02c;locus_tag=SCO5747
NC_003888.3	RefSeq	CDS	6276106	6278856	.	-	0	ID=cds5693;Parent=gene5810;Dbxref=Genbank:NP_629872.1,GeneID:1101189;Name=NP_629872.1;Note=SC7C7.02c%2C possible regulatory protein%2C len: 916 aa%3B N-terminus is similar to S. coloicolor TR:Q53897 (EMBL:X60316) AbaA ORFA (192 aa)%2C fasta scores%3B opt: 248 z-score: 257.6 E(): 4.1e-07%2C 34.2%25 identity in 187 aa overlapC-terminus is similar to several RsbU homologs e.g. Bacillus licheniformis TR:O50229 (EMBL:AF034567) sigma B regulator similar to B. subtilis RsbU phosphatase (335 aa)%2C fasta scores%3B opt: 232 z-score: 196.5 E(): 0.001%2C 26.3%25 identity in 240 aa overlap;gbkey=CDS;gene=SC7C7.02c;product=regulatory protein;protein_id=NP_629872.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6278867	6278871	.	-	.	ID=id7526;Note=possible RBS upstream of SC7C7.02c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6279254	6279258	.	+	.	ID=id7527;Note=possible RBS upstream of SC7C7.03;gbkey=RBS
NC_003888.3	RefSeq	gene	6279265	6284754	.	+	.	ID=gene5811;Dbxref=GeneID:1101190;Name=SC7C7.03;gbkey=Gene;gene=SC7C7.03;gene_biotype=protein_coding;gene_synonym=SC7C7.03;locus_tag=SCO5748
NC_003888.3	RefSeq	CDS	6279265	6284754	.	+	0	ID=cds5694;Parent=gene5811;Dbxref=Genbank:NP_629873.1,GeneID:1101190;Name=NP_629873.1;Note=SC7C7.03%2C probable sensory histidine kinase%2C len: 1829 aa%3B N-terminus has 11 92aa repeats. Highly similar to osmosensing histidine kinases from yeasts (with only five repeats) e.g. Neurospora crassa TR:Q01318 (EMBL:U53189) osmotic-1 locus histidine kinase (1298 aa)%2C fasta scores%3B opt: 2011 z-score: 1764.6 E(): 0%2C 38.3%25 identity in 1281 aa overlap. Also similar to BARA_ECOLI sensor protein BarA (918 aa) (with only one copy of the repeat)%2C fasta scores%3B opt: 378 z-score: 755.8%2C E(): 0%2C 28.9%25 identity in 619 aa overlap. Extreme N-terminus has similarity to the phosphorylated receiver domain of two-component regulators e.g. SW:YEDW_ECOLI (239 aa)%2C blast scores%3B Expect %3D 3.1e-12%2C 32%25 identity in 115 aa overlap%2C and also to the downstream regulator SC7C7.04%3B 37.6%25 identity in 109 aa overlap. Contains probable coiled-coil from 1285 to 1364 and Pfam matches to entry signal PF00512%2C Signal C termial domain%2C score 230.38 and to entry response_reg PF00072%2C Response regulator receiver domain%2C score 146;gbkey=CDS;gene=SC7C7.03;product=sensory histidine kinase;protein_id=NP_629873.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6279796	6282581	.	+	.	ID=id7528;Dbxref=GeneID:1101190;Note=10x 276 bp degenerate repeats;gbkey=repeat_region;gene=SC7C7.03
NC_003888.3	RefSeq	sequence_feature	6283387	6284094	.	+	.	ID=id7529;Dbxref=GeneID:1101190;Note=Pfam match to entry signal PF00512%2C Signal C termial domain%2C score 230.38;gbkey=misc_feature;gene=SC7C7.03
NC_003888.3	RefSeq	sequence_feature	6284386	6284730	.	+	.	ID=id7530;Dbxref=GeneID:1101190;Note=Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 146.33;gbkey=misc_feature;gene=SC7C7.03
NC_003888.3	RefSeq	ribosome_entry_site	6285243	6285248	.	+	.	ID=id7531;Note=possible RBS upstream of SC7C7.04;gbkey=RBS
NC_003888.3	RefSeq	gene	6285256	6285930	.	+	.	ID=gene5812;Dbxref=GeneID:1101191;Name=SC7C7.04;gbkey=Gene;gene=SC7C7.04;gene_biotype=protein_coding;gene_synonym=SC7C7.04;locus_tag=SCO5749
NC_003888.3	RefSeq	CDS	6285256	6285930	.	+	0	ID=cds5695;Parent=gene5812;Dbxref=Genbank:NP_629874.1,GeneID:1101191;Name=NP_629874.1;Note=SC7C7.04%2C probable two-component regulator%2C len: 224 aa%3B similar to many e.g. PHOB_ECOLI phosphate regulon transcriptional regulator (229 aa)%2C fasta scores%3B opt: 200 z-score: 349.0 E(): 3.3e-12%2C 28.2%25 identity in 216 aa overlap. Contains probable coiled-coil from 153 to 195 and Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 125.68;gbkey=CDS;gene=SC7C7.04;product=two-component regulator;protein_id=NP_629874.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6285268	6285612	.	+	.	ID=id7532;Dbxref=GeneID:1101191;Note=Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 125.68;gbkey=misc_feature;gene=SC7C7.04
NC_003888.3	RefSeq	gene	6286097	6288886	.	+	.	ID=gene5813;Dbxref=GeneID:1101192;Name=SC7C7.05;gbkey=Gene;gene=SC7C7.05;gene_biotype=protein_coding;gene_synonym=SC7C7.05;locus_tag=SCO5750
NC_003888.3	RefSeq	CDS	6286097	6288886	.	+	0	ID=cds5696;Parent=gene5813;Dbxref=Genbank:NP_629875.1,GeneID:1101192;Name=NP_629875.1;Note=SC7C7.05%2C ftsK homolog%2C integral membrane protein%2C len: 929%3B similar to members of the ftsK/spoIIIE family invoilved in cell division%2C e.g. ftsK/spoIIIE SP3E_BACSU stage iii sporulation protein E (787 aa)%2C fasta scores%3B opt: 1525 z-score: 1355.4 E(): 0%2C 45.1%25 identity in 552 aa overlapand FTSK_ECOLI cell division protein ftsK (1329 aa)%2C fasta scores%3B opt: 717 z-score: 1180.9 E(): 0%2C 37.1%25 identity in 701 aa overlap. Contains 7 degenerate repeats of AKKA(A/P) near N-terminus and PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7C7.05;product=ftsK-like protein;protein_id=NP_629875.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6286154	6286261	.	+	.	ID=id7533;Dbxref=GeneID:1101192;Note=7x 15 bp degenerate repeats;gbkey=repeat_region;gene=SC7C7.05
NC_003888.3	RefSeq	sequence_feature	6287873	6287896	.	+	.	ID=id7534;Dbxref=GeneID:1101192;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7C7.05
NC_003888.3	RefSeq	ribosome_entry_site	6289179	6289184	.	+	.	ID=id7535;Note=possible RBS upstream of SC7C7.06;gbkey=RBS
NC_003888.3	RefSeq	gene	6289190	6290053	.	+	.	ID=gene5814;Dbxref=GeneID:1101193;Name=SC7C7.06;gbkey=Gene;gene=SC7C7.06;gene_biotype=protein_coding;gene_synonym=SC7C7.06;locus_tag=SCO5751
NC_003888.3	RefSeq	CDS	6289190	6290053	.	+	0	ID=cds5697;Parent=gene5814;Dbxref=Genbank:NP_629876.1,GeneID:1101193;Name=NP_629876.1;Note=SC7C7.06%2C membrane protein%2C len: 287 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC7C7.06;product=hypothetical protein;protein_id=NP_629876.1;transl_table=11
NC_003888.3	RefSeq	gene	6290145	6291626	.	+	.	ID=gene5815;Dbxref=GeneID:1101194;Name=SC7C7.07;gbkey=Gene;gene=SC7C7.07;gene_biotype=protein_coding;gene_synonym=SC7C7.07;locus_tag=SCO5752
NC_003888.3	RefSeq	CDS	6290145	6291626	.	+	0	ID=cds5698;Parent=gene5815;Dbxref=Genbank:NP_629877.1,GeneID:1101194;Name=NP_629877.1;Note=SC7C7.07%2C unknown%2C len: 493 aa%3B similar to many members of the UPF0004 family e.g. YLIG_ECOLI (441 aa)%2C fasta scores%3B opt: 642 z-score: 947.7 E(): 0%2C 31.8%25 identity in 487 aa overlap. Contains PS01278 Uncharacterized protein family UPF0004 signature. Also similar to S. coelicolor SC4H2.08%2C fasta scores%3B E(): 9.1e-23%2C 30.3%25 identity in 445 aa overlap;gbkey=CDS;gene=SC7C7.07;product=hypothetical protein;protein_id=NP_629877.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6290703	6290765	.	+	.	ID=id7536;Dbxref=GeneID:1101194;Note=PS01278 Uncharacterized protein family UPF0004 signature;gbkey=misc_feature;gene=SC7C7.07
NC_003888.3	RefSeq	ribosome_entry_site	6291610	6291615	.	+	.	ID=id7537;Dbxref=GeneID:1101194;Note=possible RBS upstream of SC7C7.08;gbkey=RBS;gene=SC7C7.07
NC_003888.3	RefSeq	gene	6291623	6292414	.	+	.	ID=gene5816;Dbxref=GeneID:1101195;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;gene_synonym=pgsA;locus_tag=SCO5753
NC_003888.3	RefSeq	CDS	6291623	6292414	.	+	0	ID=cds5699;Parent=gene5816;Dbxref=Genbank:NP_629878.1,GeneID:1101195;Name=NP_629878.1;Note=SC7C7.08%2C pgsA%2C probable phosphatidylglycerophosphate synthase%2C len: 263 aa%3B integral membrane protein similar to many e.g. PGSA_BACSU CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (193 aa)%2C fasta scores%3B opt: 304 z-score: 312.1 E(): 3.8e-10%2C 38.0%25 identity in 187 aa overlap. Contains PS00379 CDP-alcohol phosphatidyltransferases signature. FramePlot suggests start site at V40%2C similarities start downstream of this. Upstream start site chosen by HMM%2C corroborated by RBS. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=pgsA;product=phosphatidylglycerophosphate synthase;protein_id=NP_629878.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6291986	6292054	.	+	.	ID=id7538;Dbxref=GeneID:1101195;Note=PS00379 CDP-alcohol phosphatidyltransferases signature;gbkey=misc_feature;gene=pgsA
NC_003888.3	RefSeq	ribosome_entry_site	6292397	6292402	.	+	.	ID=id7539;Dbxref=GeneID:1101195;Note=possible RBS upstream of SC7C7.09;gbkey=RBS;gene=pgsA
NC_003888.3	RefSeq	gene	6292411	6292956	.	+	.	ID=gene5817;Dbxref=GeneID:1101196;Name=SC7C7.09;gbkey=Gene;gene=SC7C7.09;gene_biotype=protein_coding;gene_synonym=SC7C7.09;locus_tag=SCO5754
NC_003888.3	RefSeq	CDS	6292411	6292956	.	+	0	ID=cds5700;Parent=gene5817;Dbxref=Genbank:NP_629879.1,GeneID:1101196;Name=NP_629879.1;Note=SC7C7.09%2C unknown%2C len: 181 aa%3B similar to competence damage induced proteins of B. subtilis and Streptococcus pneumoniae e.g. CINA_STRPN competence-damage protein (418 aa)%2C fasta scores%3B opt: 304 z-score: 431.6 E(): 8.4e-17%2C 35.8%25 identity in 165 aa overlap. Contains probable coiled-coil from 133 to 175;gbkey=CDS;gene=SC7C7.09;product=hypothetical protein;protein_id=NP_629879.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6293051	6293056	.	+	.	ID=id7540;Note=possible RSB upstream of SC7C7.10;gbkey=RBS
NC_003888.3	RefSeq	gene	6293066	6293446	.	+	.	ID=gene5818;Dbxref=GeneID:1101197;Name=SC7C7.10;gbkey=Gene;gene=SC7C7.10;gene_biotype=protein_coding;gene_synonym=SC7C7.10;locus_tag=SCO5755
NC_003888.3	RefSeq	CDS	6293066	6293446	.	+	0	ID=cds5701;Parent=gene5818;Dbxref=Genbank:NP_629880.1,GeneID:1101197;Name=NP_629880.1;Note=SC7C7.10%2C unknown%2C len: 126 aa%3B highly similar to M. tuberculosis TR:O33287 (EMBL:AL008967) possible transcriptional regulator MTV002.10C (Rv2745c) (112 aa)%2C fasta scores%3B opt: 300 z-score: 454.0 E(): 4.7e-18%2C 60.5%25 identity in 86 aa overlap;gbkey=CDS;gene=SC7C7.10;product=hypothetical protein;protein_id=NP_629880.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6293641	6293645	.	+	.	ID=id7541;Note=possible RBS upstream of SC7C7.11;gbkey=RBS
NC_003888.3	RefSeq	gene	6293651	6294121	.	+	.	ID=gene5819;Dbxref=GeneID:1101198;Name=SC7C7.11;gbkey=Gene;gene=SC7C7.11;gene_biotype=protein_coding;gene_synonym=SC7C7.11;locus_tag=SCO5756
NC_003888.3	RefSeq	CDS	6293651	6294121	.	+	0	ID=cds5702;Parent=gene5819;Dbxref=Genbank:NP_629881.1,GeneID:1101198;Name=NP_629881.1;Note=SC7C7.11%2C unknown%2C len: 156 aa%3B similar to members of the Dps family e.g. FTPA_HAEDU fine tangled pili major subunit (24 KD surface protein) (189 aa)%2C fasta scores%3B opt: 278 z-score: 370.3 E(): 2.2e-13%2C 34.4%25 identity in 151 aa overlap PS_ECOLI DNA protection during starvation protein (166 aa) and%2C fasta scores%3B opt: 220 z-score: 261.2 E(): 2.6e-07%2C 26.8%25 identity in 153 aa overlap. Contains PS00818 Dps protein family signature 1;gbkey=CDS;gene=SC7C7.11;product=hypothetical protein;protein_id=NP_629881.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6293762	6293812	.	+	.	ID=id7542;Dbxref=GeneID:1101198;Note=PS00818 Dps protein family signature 1;gbkey=misc_feature;gene=SC7C7.11
NC_003888.3	RefSeq	gene	6294128	6294394	.	+	.	ID=gene5820;Dbxref=GeneID:1101199;Name=SC7C7.12;gbkey=Gene;gene=SC7C7.12;gene_biotype=protein_coding;gene_synonym=SC7C7.12;locus_tag=SCO5757
NC_003888.3	RefSeq	CDS	6294128	6294394	.	+	0	ID=cds5703;Parent=gene5820;Dbxref=Genbank:NP_629882.1,GeneID:1101199;Name=NP_629882.1;Note=SC7C7.12%2C questionable ORF%2C len: 88 aa;gbkey=CDS;gene=SC7C7.12;product=hypothetical protein;protein_id=NP_629882.1;transl_table=11
NC_003888.3	RefSeq	gene	6294450	6294824	.	+	.	ID=gene5821;Dbxref=GeneID:1101200;Name=SC7C7.13;gbkey=Gene;gene=SC7C7.13;gene_biotype=protein_coding;gene_synonym=SC7C7.13;locus_tag=SCO5758
NC_003888.3	RefSeq	CDS	6294450	6294824	.	+	0	ID=cds5704;Parent=gene5821;Dbxref=Genbank:NP_629883.1,GeneID:1101200;Name=NP_629883.1;Note=SC7C7.13%2C possible transcriptional regulator%2C len: 124 aa%3B similar to several transcriptional regulators fomr M. tuberculosis e.g. TR:O53478 (EMBL:AL021899) regulator MTV018.21 (Rv2034) (107 aa)%2C fasta scores%3B opt: 178 z-score: 327.3 E(): 5.4e-11%2C 40.7%25 identity in 81 aa overlap. Contains probable helix-turn-helix motif at aa 34-55 (Score 999%2C +2.59 SD);gbkey=CDS;gene=SC7C7.13;product=transcriptional regulator;protein_id=NP_629883.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6294808	6294812	.	+	.	ID=id7543;Dbxref=GeneID:1101200;Note=possible RSB upstream of SC7C7.14;gbkey=RBS;gene=SC7C7.13
NC_003888.3	RefSeq	gene	6294821	6295306	.	+	.	ID=gene5822;Dbxref=GeneID:1101201;Name=SC7C7.14;gbkey=Gene;gene=SC7C7.14;gene_biotype=protein_coding;gene_synonym=SC7C7.14;locus_tag=SCO5759
NC_003888.3	RefSeq	CDS	6294821	6295306	.	+	0	ID=cds5705;Parent=gene5822;Dbxref=Genbank:NP_629884.1,GeneID:1101201;Name=NP_629884.1;Note=SC7C7.14%2C unknown%2C len: 161 aa;gbkey=CDS;gene=SC7C7.14;product=hypothetical protein;protein_id=NP_629884.1;transl_table=11
NC_003888.3	RefSeq	gene	6295344	6296174	.	-	.	ID=gene5823;Dbxref=GeneID:1101202;Name=SC7C7.15c;gbkey=Gene;gene=SC7C7.15c;gene_biotype=protein_coding;gene_synonym=SC7C7.15c;locus_tag=SCO5760
NC_003888.3	RefSeq	CDS	6295344	6296174	.	-	0	ID=cds5706;Parent=gene5823;Dbxref=Genbank:NP_629885.1,GeneID:1101202;Name=NP_629885.1;Note=SC7C7.15c%2C probable DNA glycosylase involved in DNA repair%2C len: 276 aa%3B similar to e.g. END8_ECOLI endonuclease VIII (EC 3.2.-.-) (263 aa)%2C fasta scores%3B opt: 384 z-score: 449.2 E(): 8.7e-18%2C 34.5%25 identity in 278 aa overlap;gbkey=CDS;gene=SC7C7.15c;product=DNA glycosylase;protein_id=NP_629885.1;transl_table=11
NC_003888.3	RefSeq	gene	6296193	6301265	.	-	.	ID=gene5824;Dbxref=GeneID:1101203;Name=SC7C7.16c;gbkey=Gene;gene=SC7C7.16c;gene_biotype=protein_coding;gene_synonym=SC7C7.16c;locus_tag=SCO5761
NC_003888.3	RefSeq	CDS	6296193	6301265	.	-	0	ID=cds5707;Parent=gene5824;Dbxref=Genbank:NP_629886.1,GeneID:1101203;Name=NP_629886.1;Note=SC7C7.16c%2C probable ATP dependent DNA helicase%2C len: 1690 aa%3B highly similar to e.g. LHR_ECOLI probable atp-dependent helicase lhr (EC 3.6.1.-) (1538 aa)%2C fasta scores%3B opt: 2361 z-score: 3018.1 E(): 0%2C 48.6%25 identity in 1435 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam matches to entry DEAD PF00270%2C DEAD and DEAH box helicases%2C score 30.04 and to entry helicase_C PF00271%2C Helicases conserved C-terminal domain%2C score 42.17;gbkey=CDS;gene=SC7C7.16c;product=ATP-dependent DNA helicase;protein_id=NP_629886.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6299934	6299937	.	+	.	ID=id7544;Note=end of real overlap with 9A10;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6300042	6300296	.	-	.	ID=id7545;Dbxref=GeneID:1101203;Note=Pfam match to entry helicase_C PF00271%2C Helicases conserved C-terminal domain%2C score 42.17;gbkey=misc_feature;gene=SC7C7.16c
NC_003888.3	RefSeq	sequence_feature	6300351	6301235	.	-	.	ID=id7546;Dbxref=GeneID:1101203;Note=Pfam match to entry DEAD PF00270%2C DEAD and DEAH box helicases%2C score 30.04;gbkey=misc_feature;gene=SC7C7.16c
NC_003888.3	RefSeq	sequence_feature	6301101	6301124	.	-	.	ID=id7547;Dbxref=GeneID:1101203;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7C7.16c
NC_003888.3	RefSeq	ribosome_entry_site	6301268	6301271	.	-	.	ID=id7548;Note=possible RBS upstream of SC7C7.16c;gbkey=RBS
NC_003888.3	RefSeq	gene	6301456	6302322	.	+	.	ID=gene5825;Dbxref=GeneID:1101204;Name=SC4H8.01;gbkey=Gene;gene=SC4H8.01;gene_biotype=protein_coding;gene_synonym=SC4H8.01,SC7C7.17;locus_tag=SCO5762
NC_003888.3	RefSeq	CDS	6301456	6302322	.	+	0	ID=cds5708;Parent=gene5825;Dbxref=Genbank:NP_629887.1,GeneID:1101204;Name=NP_629887.1;Note=SC4H8.01%2C unknown%2C partial CDS%2C len >29 aa~SC7C7.17%2C possible araC family transcriptional regulatory protein%2C len: 288 aa%3B some similarity to members of the araC family e.g. ADA_SALTY ADA regulatory protein (352 aa)%2C fasta scores%3B opt: 161 z-score: 197.6 E(): 0.0009%2C 31.0%25 identity in 129 aa overlap. Overlaps and extends CDS from neighboring cosmid SC4H8.01. Contains probable helix-turn-helix motif at aa 189-210 (Score 1161%2C +3.14 SD) and Pfam match to entry HTH_2 PF00165%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 74.61;gbkey=CDS;gene=SC4H8.01;product=AraC family transcription regulator;protein_id=NP_629887.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6302014	6302271	.	+	.	ID=id7549;Dbxref=GeneID:1101204;Note=Pfam match to entry HTH_2 PF00165%2C Bacterial regulatory helix-loop-helix proteins%2C araC family%2C score 74.61;gbkey=misc_feature;gene=SC4H8.01
NC_003888.3	RefSeq	ribosome_entry_site	6302314	6302317	.	+	.	ID=id7550;Dbxref=GeneID:1101204;Note=possible RBS upstream of SC4H8.02;gbkey=RBS;gene=SC4H8.01
NC_003888.3	RefSeq	gene	6302319	6303089	.	+	.	ID=gene5826;Dbxref=GeneID:1101205;Name=SC4H8.02;gbkey=Gene;gene=SC4H8.02;gene_biotype=protein_coding;gene_synonym=SC4H8.02;locus_tag=SCO5763
NC_003888.3	RefSeq	CDS	6302319	6303089	.	+	0	ID=cds5709;Parent=gene5826;Dbxref=Genbank:NP_629888.1,GeneID:1101205;Name=NP_629888.1;Note=SC4H8.02%2C possible membrane protein%2C len: 256 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4H8.02;product=hypothetical protein;protein_id=NP_629888.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6303074	6303078	.	+	.	ID=id7551;Dbxref=GeneID:1101205;Note=possible RBS upstream of SC4H8.03;gbkey=RBS;gene=SC4H8.02
NC_003888.3	RefSeq	gene	6303086	6303394	.	+	.	ID=gene5827;Dbxref=GeneID:1101206;Name=SC4H8.03;gbkey=Gene;gene=SC4H8.03;gene_biotype=protein_coding;gene_synonym=SC4H8.03;locus_tag=SCO5764
NC_003888.3	RefSeq	CDS	6303086	6303394	.	+	0	ID=cds5710;Parent=gene5827;Dbxref=Genbank:NP_629889.1,GeneID:1101206;Name=NP_629889.1;Note=SC4H8.03%2C membrane protein%2C len: 102 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4H8.03;product=hypothetical protein;protein_id=NP_629889.1;transl_table=11
NC_003888.3	RefSeq	gene	6303404	6304429	.	-	.	ID=gene5828;Dbxref=GeneID:1101207;Name=SC4H8.04c;gbkey=Gene;gene=SC4H8.04c;gene_biotype=protein_coding;gene_synonym=SC4H8.04c;locus_tag=SCO5765
NC_003888.3	RefSeq	CDS	6303404	6304429	.	-	0	ID=cds5711;Parent=gene5828;Dbxref=Genbank:NP_629890.1,GeneID:1101207;Name=NP_629890.1;Note=SC4H8.04c%2C unknown%2C len: 341 aa%3B first start site used;gbkey=CDS;gene=SC4H8.04c;product=hypothetical protein;protein_id=NP_629890.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6304437	6304441	.	+	.	ID=id7552;Note=possible RBS upstream of SC4H8.05;gbkey=RBS
NC_003888.3	RefSeq	gene	6304454	6304648	.	+	.	ID=gene5829;Dbxref=GeneID:1101208;Name=SC4H8.05;gbkey=Gene;gene=SC4H8.05;gene_biotype=protein_coding;gene_synonym=SC4H8.05;locus_tag=SCO5766
NC_003888.3	RefSeq	CDS	6304454	6304648	.	+	0	ID=cds5712;Parent=gene5829;Dbxref=Genbank:NP_629891.1,GeneID:1101208;Name=NP_629891.1;Note=SC4H8.05%2C unknown%2C len: 64 aa%3B similar to M. tuberculosis hypothetical protein TR:E1173868 (MTV002.03c) (68 aa)%2C fasta scores%3B opt: 193 z-score: 307.9 E(): 5.8e-10%2C 40.6%25 identity in 64 aa overlap. Note that this protein is also upstream of RecA;gbkey=CDS;gene=SC4H8.05;product=hypothetical protein;protein_id=NP_629891.1;transl_table=11
NC_003888.3	RefSeq	gene	6304820	6306028	.	+	.	ID=gene5830;Dbxref=GeneID:1101209;Name=SC4H8.06;gbkey=Gene;gene=SC4H8.06;gene_biotype=protein_coding;gene_synonym=SC4H8.06;locus_tag=SCO5767
NC_003888.3	RefSeq	CDS	6304820	6306028	.	+	0	ID=cds5713;Parent=gene5830;Dbxref=Genbank:NP_629892.1,GeneID:1101209;Name=NP_629892.1;Note=SC4H8.06%2C unknown%2C probable integral membrane protein%2C len: 402 aa%3B weakly similar to several hypotheical proteins from B. subtilis and Methanococcus e.g. TR:E1184257 (EMBL:Z99120) from B. subtilis (369 aa)%2C fasta scores%3B opt: 375 z-score: 321.7 E(): 1e-10%2C 24.1%25 identity in 348 aa overlap. C-terminal region highly similar to TR:Q54391 (EMBL:X76076) Streptomyces lividans RecA gene (fragment) 75 aa%3B fasta scores: opt: 490 Z-score: 548.1 E(): 6.7e-23%3B 96.000%25 identity in 75 aa overlap. Start site chosen by similarity. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4H8.06;product=hypothetical protein;protein_id=NP_629892.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6305801	6307879	.	+	.	ID=id7553;Note=99%25 match to EM_BA:SLRECA X76076 S.lividans RecA gene from: 1 to: 2085;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6306165	6306365	.	-	.	ID=gene5831;Dbxref=GeneID:1101210;Name=SC4H8.07c;gbkey=Gene;gene=SC4H8.07c;gene_biotype=protein_coding;gene_synonym=SC4H8.07c;locus_tag=SCO5768
NC_003888.3	RefSeq	CDS	6306165	6306365	.	-	0	ID=cds5714;Parent=gene5831;Dbxref=Genbank:NP_629893.1,GeneID:1101210;Name=NP_629893.1;Note=SC4H8.07c%2C unknown%2C len: 66 aa%3B similar to M. tuberculosis hypothetical protein TR:O06782 (EMBL:Z95972) MTCI376.19 (51 aa)%2C fasta scores%3B opt: 107 z-score: 185.7 E(): 0.0038%2C 38.6%25 identity in 44 aa overlap;gbkey=CDS;gene=SC4H8.07c;product=hypothetical protein;protein_id=NP_629893.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6306374	6306377	.	-	.	ID=id7554;Note=possible RBS upstream of SC4H8.07c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6306644	6306648	.	+	.	ID=id7555;Note=possible RBS upstream of recA;gbkey=RBS
NC_003888.3	RefSeq	gene	6306654	6307778	.	+	.	ID=gene5832;Dbxref=GeneID:1101211;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=SCO5769
NC_003888.3	RefSeq	CDS	6306654	6307778	.	+	0	ID=cds5715;Parent=gene5832;Dbxref=Genbank:NP_629894.1,GeneID:1101211;Name=NP_629894.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=recombinase A;protein_id=NP_629894.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6306849	6306872	.	+	.	ID=id7556;Dbxref=GeneID:1101211;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=recA
NC_003888.3	RefSeq	sequence_feature	6307293	6307319	.	+	.	ID=id7557;Dbxref=GeneID:1101211;Note=PS00321 recA signature;gbkey=misc_feature;gene=recA
NC_003888.3	RefSeq	ribosome_entry_site	6307985	6307988	.	+	.	ID=id7558;Note=possible RBS upstream of recX;gbkey=RBS
NC_003888.3	RefSeq	gene	6307998	6308564	.	+	.	ID=gene5833;Dbxref=GeneID:1101212;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;gene_synonym=SC4H8.09;locus_tag=SCO5770
NC_003888.3	RefSeq	CDS	6307998	6308564	.	+	0	ID=cds5716;Parent=gene5833;Dbxref=Genbank:NP_629895.1,GeneID:1101212;Name=NP_629895.1;Note=binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities;gbkey=CDS;gene=recX;product=recombination regulator RecX;protein_id=NP_629895.1;transl_table=11
NC_003888.3	RefSeq	gene	6308921	6309319	.	-	.	ID=gene5834;Dbxref=GeneID:1101213;Name=SC4H8.10c;gbkey=Gene;gene=SC4H8.10c;gene_biotype=protein_coding;gene_synonym=SC4H8.10c;locus_tag=SCO5771
NC_003888.3	RefSeq	CDS	6308921	6309319	.	-	0	ID=cds5717;Parent=gene5834;Dbxref=Genbank:NP_629896.1,GeneID:1101213;Name=NP_629896.1;Note=SC4H8.10c%2C hypothetical protein%2C len: 132 aa%3B similar to TR:AAK45350 (EMBL:AE006990) Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT1096%2C 131 aa%3B fasta scores: opt: 429 Z-score: 543.2 E(): 1.3e-22%3B 57.143%25 identity in 119 aa overlap;gbkey=CDS;gene=SC4H8.10c;product=hypothetical protein;protein_id=NP_629896.1;transl_table=11
NC_003888.3	RefSeq	gene	6309316	6309864	.	-	.	ID=gene5835;Dbxref=GeneID:1101214;Name=SC4H8.11c;gbkey=Gene;gene=SC4H8.11c;gene_biotype=protein_coding;gene_synonym=SC4H8.11c;locus_tag=SCO5772
NC_003888.3	RefSeq	CDS	6309316	6309864	.	-	0	ID=cds5718;Parent=gene5835;Dbxref=Genbank:NP_629897.1,GeneID:1101214;Name=NP_629897.1;Note=SC4H8.11c%2C unknown%2C len: 182 aa;gbkey=CDS;gene=SC4H8.11c;product=hypothetical protein;protein_id=NP_629897.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6309326	6309329	.	-	.	ID=id7559;Dbxref=GeneID:1101214;Note=possible RBS upstream of SC4H8.10c;gbkey=RBS;gene=SC4H8.11c
NC_003888.3	RefSeq	ribosome_entry_site	6309873	6309876	.	-	.	ID=id7560;Note=possible RBS upstream of SC4H8.11c;gbkey=RBS
NC_003888.3	RefSeq	gene	6310159	6311784	.	-	.	ID=gene5836;Dbxref=GeneID:1101215;Name=SC4H8.12c;gbkey=Gene;gene=SC4H8.12c;gene_biotype=protein_coding;gene_synonym=SC4H8.12c;locus_tag=SCO5773
NC_003888.3	RefSeq	CDS	6310159	6311784	.	-	0	ID=cds5719;Parent=gene5836;Dbxref=Genbank:NP_629898.1,GeneID:1101215;Name=NP_629898.1;Note=SC4H8.12c%2C possible monooxygenase%2C len: 541 aa%3B weakly similar to many eg. TR:Q54171 (EMBL:X87093) oxygenase urdE from Streptomyces fradiae (495 aa)%2C fasta scores%3B opt: 333 z-score: 428.9 E(): 1.1e-16%2C 30.4%25 identity in 539 aa overlap;gbkey=CDS;gene=SC4H8.12c;product=monooxygenase;protein_id=NP_629898.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6311794	6311799	.	-	.	ID=id7561;Note=possible RBS upstream of SC4H8.12c;gbkey=RBS
NC_003888.3	RefSeq	gene	6311961	6312860	.	-	.	ID=gene5837;Dbxref=GeneID:1101216;Name=gluD;gbkey=Gene;gene=gluD;gene_biotype=protein_coding;gene_synonym=gluD;locus_tag=SCO5774
NC_003888.3	RefSeq	CDS	6311961	6312860	.	-	0	ID=cds5720;Parent=gene5837;Dbxref=Genbank:NP_629899.1,GeneID:1101216;Name=NP_629899.1;Note=SC4H8.13c%2C gluD%2C probable glutamate permease%2C len: 299%3B similar to many members of the HisMQ subfamily of the binding-protein dependent transporters eg. GLUD_CORGL P48245 glutamate transport system permease from Corynebacterium glutamicum (273 aa)%2C fasta scores%3B opt: 673 z-score: 843.4 E(): 0%2C 47.0%25 identity in 251 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane component signature;gbkey=CDS;gene=gluD;product=glutamate permease;protein_id=NP_629899.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6312288	6312374	.	-	.	ID=id7562;Dbxref=GeneID:1101216;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=misc_feature;gene=gluD
NC_003888.3	RefSeq	gene	6312857	6313525	.	-	.	ID=gene5838;Dbxref=GeneID:1101217;Name=gluC;gbkey=Gene;gene=gluC;gene_biotype=protein_coding;gene_synonym=gluC;locus_tag=SCO5775
NC_003888.3	RefSeq	CDS	6312857	6313525	.	-	0	ID=cds5721;Parent=gene5838;Dbxref=Genbank:NP_629900.1,GeneID:1101217;Name=NP_629900.1;Note=SC4H8.14c%2C gluC%2C probable glutamate permease%2C len: 222%3B similar to many members of the HisMQ subfamily of the binding-protein dependent transporters eg. GLUC_CORGL P48244 glutamate transport system permease from Corynebacterium glutamicum (225 aa)%2C fasta scores%3B opt: 730 z-score: 1209.4 E(): 0%2C 58.8%25 identity in 199 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane component signature;gbkey=CDS;gene=gluC;product=glutamate permease;protein_id=NP_629900.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6312871	6312877	.	-	.	ID=id7563;Dbxref=GeneID:1101217;Note=possible RBS upstream of gluD;gbkey=RBS;gene=gluC
NC_003888.3	RefSeq	sequence_feature	6313097	6313183	.	-	.	ID=id7564;Dbxref=GeneID:1101217;Note=PS00402 Binding-protein-dependent transport systems inner membrane component signature;gbkey=misc_feature;gene=gluC
NC_003888.3	RefSeq	ribosome_entry_site	6313529	6313532	.	-	.	ID=id7565;Note=possible RBS upstream of gluC;gbkey=RBS
NC_003888.3	RefSeq	gene	6313610	6314446	.	-	.	ID=gene5839;Dbxref=GeneID:1101218;Name=gluB;gbkey=Gene;gene=gluB;gene_biotype=protein_coding;gene_synonym=gluB;locus_tag=SCO5776
NC_003888.3	RefSeq	CDS	6313610	6314446	.	-	0	ID=cds5722;Parent=gene5839;Dbxref=Genbank:NP_629901.1,GeneID:1101218;Name=NP_629901.1;Note=SC4H8.15c%2C gluB%2C probable glutamate binding protein%2C len: 278 aa%3B similar to many members of the periplasmic solute-binding family 3 eg. GLUB_CORGL P48242 glutamate-binding protein precursor from Corynebacterium glutamicum (295 aa)%2C fasta scores%3B opt: 733 z-score: 768.3 E(): 0%2C 46.9%25 identity in 277 aa overlap. Contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site%3B also contains PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature;gbkey=CDS;gene=gluB;product=glutamate binding protein;protein_id=NP_629901.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6314225	6314266	.	-	.	ID=id7566;Dbxref=GeneID:1101218;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature;gbkey=misc_feature;gene=gluB
NC_003888.3	RefSeq	sequence_feature	6314378	6314410	.	-	.	ID=id7567;Dbxref=GeneID:1101218;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=gluB
NC_003888.3	RefSeq	ribosome_entry_site	6314455	6314459	.	-	.	ID=id7568;Note=possible RBS upstream of gluB;gbkey=RBS
NC_003888.3	RefSeq	gene	6314572	6315348	.	-	.	ID=gene5840;Dbxref=GeneID:1101219;Name=gluA;gbkey=Gene;gene=gluA;gene_biotype=protein_coding;gene_synonym=gluA;locus_tag=SCO5777
NC_003888.3	RefSeq	CDS	6314572	6315348	.	-	0	ID=cds5723;Parent=gene5840;Dbxref=Genbank:NP_629902.1,GeneID:1101219;Name=NP_629902.1;Note=SC4H8.16c%2C gluA%2C probable glutamate uptake system ATP-binding protein%2C len: 258 aa%3B highly similar to many amino-acid uptake ATP-binding proteins eg. GLUA_CORGL P48243 glutamate transport atp-binding protein from Corynebacterium gluamicum (242 aa)%2C fasta scores%3B opt: 1152 z-score: 1564.5 E(): 0%2C 71.5%25 identity in 242 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=gluA;product=glutamate uptake system ATP-binding protein;protein_id=NP_629902.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6314848	6314892	.	-	.	ID=id7569;Dbxref=GeneID:1101219;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=gluA
NC_003888.3	RefSeq	sequence_feature	6315178	6315201	.	-	.	ID=id7570;Dbxref=GeneID:1101219;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=gluA
NC_003888.3	RefSeq	ribosome_entry_site	6315359	6315362	.	-	.	ID=id7571;Note=possible RBS upstream of gluA;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6315642	6315645	.	+	.	ID=id7572;Note=possible RBS upstream of SC4H8.17c;gbkey=RBS
NC_003888.3	RefSeq	gene	6315651	6316337	.	+	.	ID=gene5841;Dbxref=GeneID:1101220;Name=SC4H8.17;gbkey=Gene;gene=SC4H8.17;gene_biotype=protein_coding;gene_synonym=SC4H8.17;locus_tag=SCO5778
NC_003888.3	RefSeq	CDS	6315651	6316337	.	+	0	ID=cds5724;Parent=gene5841;Dbxref=Genbank:NP_629903.1,GeneID:1101220;Name=NP_629903.1;Note=SC4H8.17%2C two-component system transcriptional regulator%2C len: 228 aa%3B similar to many eg. VANR_ENTFA Q47744 regulatory protein VanR from enterococcuus faecalis (220 aa)%2C fasta scores%3B opt: 469 z-score: 742.2 E(): 0%2C 37.1%25 identity in 224 aa overlap;gbkey=CDS;gene=SC4H8.17;product=two-component system regulator;protein_id=NP_629903.1;transl_table=11
NC_003888.3	RefSeq	gene	6316347	6317792	.	+	.	ID=gene5842;Dbxref=GeneID:1101221;Name=SC4H8.18;gbkey=Gene;gene=SC4H8.18;gene_biotype=protein_coding;gene_synonym=SC4H8.18;locus_tag=SCO5779
NC_003888.3	RefSeq	CDS	6316347	6317792	.	+	0	ID=cds5725;Parent=gene5842;Dbxref=Genbank:NP_733674.1,GeneID:1101221;Name=NP_733674.1;Note=SC4H8.18%2C two-component system sensor/histidine kinase%2C partial CDS%2C len: >481 aa%3B similar to many e.g. COPS_PSESM Q02541 sensor protein CopS from Pseudomonas syringae (487 aa)%2C fasta scores%3B opt: 324 z-score: 387.1 E(): 2.3e-14%2C 24.8%25 identity in 456 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4H8.18;product=two-component system sensor;protein_id=NP_733674.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6317681	6317791	.	+	.	ID=id7573;Dbxref=GeneID:1101221;Note=overlap with Cosmid SC4H8 from: 15450 to: 15560;gbkey=misc_feature;gene=SC4H8.18
NC_003888.3	RefSeq	sequence_feature	6317681	6317791	.	-	.	ID=id7574;Note=overlap with Cosmid St4H2;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6317771	6318766	.	-	.	ID=gene5843;Dbxref=GeneID:1101222;Name=SC4H2.01c;gbkey=Gene;gene=SC4H2.01c;gene_biotype=protein_coding;gene_synonym=SC4H2.01c;locus_tag=SCO5780
NC_003888.3	RefSeq	CDS	6317771	6318766	.	-	0	ID=cds5726;Parent=gene5843;Dbxref=Genbank:NP_629904.1,GeneID:1101222;Name=NP_629904.1;Note=SC4H2.01c%2C probable hypothetical protein%2C len: 331 aa%3B some similarity to a hypothetical protein from Brucella abortus BCSP_BRUAB P12920 31 kd immunogenic protein precursor (329 aa)%2C fasta scores%3B opt: 399 z-score: 357.4 E(): 1.1e-12%2C 32.7%25 identity in 336 aa overlap. Contains probable N-terminal signal sequence;gbkey=CDS;gene=SC4H2.01c;product=hypothetical protein;protein_id=NP_629904.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6318775	6318778	.	-	.	ID=id7575;Note=possible RBS upstream of SC4H2.01c;gbkey=RBS
NC_003888.3	RefSeq	gene	6318816	6319355	.	+	.	ID=gene5844;Dbxref=GeneID:1101223;Name=SC4H2.02;gbkey=Gene;gene=SC4H2.02;gene_biotype=protein_coding;gene_synonym=SC4H2.02;locus_tag=SCO5781
NC_003888.3	RefSeq	CDS	6318816	6319355	.	+	0	ID=cds5727;Parent=gene5844;Dbxref=Genbank:NP_629905.1,GeneID:1101223;Name=NP_629905.1;Note=SC4H2.02%2C hypothetical protein%2C len: 179 aa%3B Proline-rich in N-terminus. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4H2.02;product=hypothetical protein;protein_id=NP_629905.1;transl_table=11
NC_003888.3	RefSeq	gene	6319451	6320686	.	-	.	ID=gene5845;Dbxref=GeneID:1101224;Name=SC4H2.03c;gbkey=Gene;gene=SC4H2.03c;gene_biotype=protein_coding;gene_synonym=SC4H2.03c;locus_tag=SCO5782
NC_003888.3	RefSeq	CDS	6319451	6320686	.	-	0	ID=cds5728;Parent=gene5845;Dbxref=Genbank:NP_629906.1,GeneID:1101224;Name=NP_629906.1;Note=SC4H2.03c%2C possible transmembrane transport protein%2C len: 411 aa%3B similar to several hypothetical proteins e.g. M. tuberculosis TR:O05881 (EMBL:Z95121) MTCY20B11.11C (385 aa)%2C fasta scores opt: 1226 z-score: 1612.0 E(): 0%2C 53.5%25 identity in 372 aa overlap%2C and to members of the KEFB/KEFC potassium transporters family e.g. KEFB_ECOLI P45522 glutathione-regulated potassium-efflux protein (601 aa)%2C fastascores%3B opt: 327 z-score: 292.9 E(): 4.3e-09%2C 25.3%25 identity in 396 aa overlap;gbkey=CDS;gene=SC4H2.03c;product=transmembrane transport protein;protein_id=NP_629906.1;transl_table=11
NC_003888.3	RefSeq	gene	6320691	6321176	.	-	.	ID=gene5846;Dbxref=GeneID:1101225;Name=SC4H2.04c;gbkey=Gene;gene=SC4H2.04c;gene_biotype=protein_coding;gene_synonym=SC4H2.04c;locus_tag=SCO5783
NC_003888.3	RefSeq	CDS	6320691	6321176	.	-	0	ID=cds5729;Parent=gene5846;Dbxref=Genbank:NP_629907.1,GeneID:1101225;Name=NP_629907.1;Note=SC4H2.04c%2C hypothetical protein%2C len: 161 aa%3B similar to hypothetical proteins from several organisms e.g. M. tuberculosis TR:O05882 (EMBL:Z95121) MTCY20B11.12C (160 aa)%2C fasta scores%3B opt: 315 z-score: 557.4 E(): 8e-24%2C 40.0%25 identity in 150 aa overlap (also upstream of a  transport protein);gbkey=CDS;gene=SC4H2.04c;product=hypothetical protein;protein_id=NP_629907.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6320694	6320698	.	-	.	ID=id7576;Dbxref=GeneID:1101225;Note=possible RBS upstream of SC4H2.03c;gbkey=RBS;gene=SC4H2.04c
NC_003888.3	RefSeq	ribosome_entry_site	6321186	6321189	.	-	.	ID=id7577;Note=possible RBS upstream of SC4H2.04c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6321282	6321286	.	+	.	ID=id7578;Note=possible RBS upstream of SC4H2.05;gbkey=RBS
NC_003888.3	RefSeq	gene	6321291	6322367	.	+	.	ID=gene5847;Dbxref=GeneID:1101226;Name=SC4H2.05;gbkey=Gene;gene=SC4H2.05;gene_biotype=protein_coding;gene_synonym=SC4H2.05;locus_tag=SCO5784
NC_003888.3	RefSeq	CDS	6321291	6322367	.	+	0	ID=cds5730;Parent=gene5847;Dbxref=Genbank:NP_629908.1,GeneID:1101226;Name=NP_629908.1;Note=SC4H2.05%2C probable two-component sensor protein%2C len: 358 aa%3B similar to many e.g. DEGS_BACSU P13799 sensor protein DegS (ec 2.7.3.-)%2C Bacillus subtilis (385 aa)%2C fasta scores%3B opt: 317 z-score: 334.6 E(): 2e-11%2C 31.3%25 identity in 227 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4H2.05;product=two-component sensor;protein_id=NP_629908.1;transl_table=11
NC_003888.3	RefSeq	gene	6322367	6323026	.	+	.	ID=gene5848;Dbxref=GeneID:1101227;Name=SC4H2.06;gbkey=Gene;gene=SC4H2.06;gene_biotype=protein_coding;gene_synonym=SC4H2.06;locus_tag=SCO5785
NC_003888.3	RefSeq	CDS	6322367	6323026	.	+	0	ID=cds5731;Parent=gene5848;Dbxref=Genbank:NP_629909.1,GeneID:1101227;Name=NP_629909.1;Note=SC4H2.06%2C probable two-component transcriptional regulator%2C len: 219 aa%3B similar to many e.g. DEGU_BACSU P13800 transcriptional regulatory protein DegU (229 aa)%2C fasta scores%3B opt: 343 z-score: 736.1 E(): 0%2C 37.1%25 identity in 224 aa overlap. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature%2C Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 147.25 and Pfam match to entry GerE PF00196%2C Bacterial regulatory proteins%2C luxR family%2C score 99.11;gbkey=CDS;gene=SC4H2.06;product=two-component regulator;protein_id=NP_629909.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6322385	6322726	.	+	.	ID=id7579;Dbxref=GeneID:1101227;Note=Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 147.25;gbkey=misc_feature;gene=SC4H2.06
NC_003888.3	RefSeq	sequence_feature	6322826	6323023	.	+	.	ID=id7580;Dbxref=GeneID:1101227;Note=Pfam match to entry GerE PF00196%2C Bacterial regulatory proteins%2C luxR family%2C score 99.11;gbkey=misc_feature;gene=SC4H2.06
NC_003888.3	RefSeq	sequence_feature	6322877	6322960	.	+	.	ID=id7581;Dbxref=GeneID:1101227;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC4H2.06
NC_003888.3	RefSeq	gene	6323081	6324283	.	-	.	ID=gene5849;Dbxref=GeneID:1101228;Name=SC4H2.07c;gbkey=Gene;gene=SC4H2.07c;gene_biotype=protein_coding;gene_synonym=SC4H2.07c;locus_tag=SCO5786
NC_003888.3	RefSeq	CDS	6323081	6324283	.	-	0	ID=cds5732;Parent=gene5849;Dbxref=Genbank:NP_629910.1,GeneID:1101228;Name=NP_629910.1;Note=SC4H2.07c%2C possible  hydrolase%2C len: 400 aa%3B similar in N-terminus to many e.g GUNA_STRLI P27035 endoglucanase CelA precursor (459 aa)%2C fasta scores%3B opt: 376 z-score: 257.5 E(): 4e-07%2C 37.7%25 identity in 175 aa overlap. Contains a very Thr- Pro-rich region at aa 143-170%2C a possible N-terminal signal sequence and an appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site. C-terminal region has no apparent similarities. Also contains a TTA leucine codon%3B a potential target for action of bldA;gbkey=CDS;gene=SC4H2.07c;product=hydrolase;protein_id=NP_629910.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6324164	6324196	.	-	.	ID=id7582;Dbxref=GeneID:1101228;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4H2.07c
NC_003888.3	RefSeq	sequence_feature	6324260	6324262	.	-	.	ID=id7583;Dbxref=GeneID:1101228;Note=TTA leucine codon%3B potential target for action of bldA;gbkey=misc_feature;gene=SC4H2.07c
NC_003888.3	RefSeq	ribosome_entry_site	6324290	6324295	.	-	.	ID=id7584;Note=possible RBS upstream of SC4H2.07c;gbkey=RBS
NC_003888.3	RefSeq	gene	6324453	6325970	.	+	.	ID=gene5850;Dbxref=GeneID:1101229;Name=SC4H2.08;gbkey=Gene;gene=SC4H2.08;gene_biotype=protein_coding;gene_synonym=SC4H2.08;locus_tag=SCO5787
NC_003888.3	RefSeq	CDS	6324453	6325970	.	+	0	ID=cds5733;Parent=gene5850;Dbxref=Genbank:NP_629911.1,GeneID:1101229;Name=NP_629911.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;gene=SC4H2.08;product=(dimethylallyl)adenosine tRNA methylthiotransferase;protein_id=NP_629911.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6324939	6325001	.	+	.	ID=id7585;Dbxref=GeneID:1101229;Note=PS01278 Uncharacterized protein family UPF0004 signature;gbkey=misc_feature;gene=SC4H2.08
NC_003888.3	RefSeq	gene	6326020	6326733	.	+	.	ID=gene5851;Dbxref=GeneID:1101230;Name=SC4H2.09;gbkey=Gene;gene=SC4H2.09;gene_biotype=protein_coding;gene_synonym=SC4H2.09;locus_tag=SCO5788
NC_003888.3	RefSeq	CDS	6326020	6326733	.	+	0	ID=cds5734;Parent=gene5851;Dbxref=Genbank:NP_629912.1,GeneID:1101230;Name=NP_629912.1;Note=SC4H2.09%2C unknown%2C len: 237 aa%3B similar to a hypothetical protein from Mycobacterium tuberculosis and M. leprae%2C TTR:O33233 (EMBL:Z98209) MTCY154.08C (231 aa)%2C fasta scores%3B opt: 306 z-score: 320.4 E(): 1.3e-10%2C 33.2%25 identity in 241 aa overlap;gbkey=CDS;gene=SC4H2.09;product=hypothetical protein;protein_id=NP_629912.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6326800	6326865	.	+	.	ID=id7586;Note=hairpin loop with 26/32 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6326868	6327161	.	-	.	ID=gene5852;Dbxref=GeneID:1101231;Name=SC4H2.10c;gbkey=Gene;gene=SC4H2.10c;gene_biotype=protein_coding;gene_synonym=SC4H2.10c;locus_tag=SCO5789
NC_003888.3	RefSeq	CDS	6326868	6327161	.	-	0	ID=cds5735;Parent=gene5852;Dbxref=Genbank:NP_629913.1,GeneID:1101231;Name=NP_629913.1;Note=SC4H2.10c%2C unknown%2C len: 97 aa;gbkey=CDS;gene=SC4H2.10c;product=hypothetical protein;protein_id=NP_629913.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6327173	6327176	.	-	.	ID=id7587;Note=possible RBS upstream of SC4H2.11c;gbkey=RBS
NC_003888.3	RefSeq	gene	6327186	6327473	.	-	.	ID=gene5853;Dbxref=GeneID:1101232;Name=SC4H2.11c;gbkey=Gene;gene=SC4H2.11c;gene_biotype=protein_coding;gene_synonym=SC4H2.11c;locus_tag=SCO5790
NC_003888.3	RefSeq	CDS	6327186	6327473	.	-	0	ID=cds5736;Parent=gene5853;Dbxref=Genbank:NP_629914.1,GeneID:1101232;Name=NP_629914.1;Note=SC4H2.11c%2C unknown%2C len: 95 aa;gbkey=CDS;gene=SC4H2.11c;product=hypothetical protein;protein_id=NP_629914.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6327479	6327482	.	-	.	ID=id7588;Note=possible RBS upstream of SC4H2.11c;gbkey=RBS
NC_003888.3	RefSeq	gene	6327656	6328594	.	+	.	ID=gene5854;Dbxref=GeneID:1101233;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;gene_synonym=SC4H2.12;locus_tag=SCO5791
NC_003888.3	RefSeq	CDS	6327656	6328594	.	+	0	ID=cds5737;Parent=gene5854;Dbxref=Genbank:NP_629915.1,GeneID:1101233;Name=NP_629915.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=NP_629915.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6327698	6327721	.	+	.	ID=id7589;Dbxref=GeneID:1101233;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=miaA
NC_003888.3	RefSeq	ribosome_entry_site	6328687	6328691	.	+	.	ID=id7590;Note=possible RBS upstream of SC4H2.13;gbkey=RBS
NC_003888.3	RefSeq	gene	6328696	6329199	.	+	.	ID=gene5855;Dbxref=GeneID:1101234;Name=SC4H2.13;gbkey=Gene;gene=SC4H2.13;gene_biotype=protein_coding;gene_synonym=SC4H2.13;locus_tag=SCO5792
NC_003888.3	RefSeq	CDS	6328696	6329199	.	+	0	ID=cds5738;Parent=gene5855;Dbxref=Genbank:NP_629916.1,GeneID:1101234;Name=NP_629916.1;Note=SC4H2.13%2C probable transmembrane protein%2C len: 167 aa%3B contains three possible transmembrane domains in C-terminus;gbkey=CDS;gene=SC4H2.13;product=transmembrane protein;protein_id=NP_629916.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6329267	6329270	.	+	.	ID=id7591;Note=possible RBS upstream of dapF;gbkey=RBS
NC_003888.3	RefSeq	gene	6329272	6330141	.	+	.	ID=gene5856;Dbxref=GeneID:1101235;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=SCO5793
NC_003888.3	RefSeq	CDS	6329272	6330141	.	+	0	ID=cds5739;Parent=gene5856;Dbxref=Genbank:NP_629917.1,GeneID:1101235;Name=NP_629917.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=NP_629917.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6330378	6330383	.	+	.	ID=id7592;Note=possible RBS upstream of SC4H2.15;gbkey=RBS
NC_003888.3	RefSeq	gene	6330388	6332565	.	+	.	ID=gene5857;Dbxref=GeneID:1101236;Name=SC4H2.15;gbkey=Gene;gene=SC4H2.15;gene_biotype=protein_coding;gene_synonym=SC4H2.15;locus_tag=SCO5794
NC_003888.3	RefSeq	CDS	6330388	6332565	.	+	0	ID=cds5740;Parent=gene5857;Dbxref=Genbank:NP_629918.1,GeneID:1101236;Name=NP_629918.1;Note=SC4H2.15%2C possible kinase/phosphohydrolase%2C len: 725%3B similar to many RelA and SpoT genes e.g. RELA_STRCO P52560 GTP pyrophosphokinase (ec 2.7.6.5) (847 aa)%2C fasta scores%3B opt: 1049 z-score: 1312.4 E(): 0%2C 39.5%25 identity in 792 aa overlap and SPOT_ECOLI P17580 guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase (702 aa)%2C fasta scores%3B opt:1040 z-score: 867.0 E(): 0%2C 33.8%25 identity in 695 aa overlap;gbkey=CDS;gene=SC4H2.15;product=kinase/phosphohydrolase;protein_id=NP_629918.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6332648	6332681	.	+	.	ID=id7593;Note=34bp imperfect direct_repeat 1;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6332676	6332709	.	+	.	ID=id7594;Note=34bp imperfect direct_repeat 2;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6332704	6332737	.	+	.	ID=id7595;Note=34bp imperfect direct_repeat 3;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6332816	6334354	.	+	.	ID=gene5858;Dbxref=GeneID:1101237;Name=SC4H2.16;gbkey=Gene;gene=SC4H2.16;gene_biotype=protein_coding;gene_synonym=SC4H2.16;locus_tag=SCO5795
NC_003888.3	RefSeq	CDS	6332816	6334354	.	+	0	ID=cds5741;Parent=gene5858;Dbxref=Genbank:NP_629919.1,GeneID:1101237;Name=NP_629919.1;Note=SC4H2.16%2C probable zinc metalloprotease ( membrane protein)%2C len: 512 aa%3B weakly similar to the N-terminus of many%2C longer%2C aminopeptidases%2C e.g. AMPN_LACLA Q48656 aminopeptidase n (ec 3.4.11.2) (848 aa)%2C fasta scores%3B opt: 304 z-score: 287.5 E(): 8.6e-09%2C 25.2%25 identity in 440 aa overlap. Contains match to Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature and Pfam match to entry zn-protease PF00099%2C Zinc-binding metalloprotease domain%2C score 28.22. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4H2.16;product=zinc metalloprotease membrane protein;protein_id=NP_629919.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6333797	6333844	.	+	.	ID=id7596;Dbxref=GeneID:1101237;Note=Pfam match to entry zn-protease PF00099%2C Zinc-binding metalloprotease domain%2C score 28.22;gbkey=misc_feature;gene=SC4H2.16
NC_003888.3	RefSeq	sequence_feature	6333800	6333829	.	+	.	ID=id7597;Dbxref=GeneID:1101237;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC4H2.16
NC_003888.3	RefSeq	ribosome_entry_site	6334493	6334497	.	+	.	ID=id7598;Note=possible RBS upstream of SC4H2.17;gbkey=RBS
NC_003888.3	RefSeq	gene	6334502	6335995	.	+	.	ID=gene5859;Dbxref=GeneID:1101238;Name=SC4H2.17;gbkey=Gene;gene=SC4H2.17;gene_biotype=protein_coding;gene_synonym=SC4H2.17;locus_tag=SCO5796
NC_003888.3	RefSeq	CDS	6334502	6335995	.	+	0	ID=cds5742;Parent=gene5859;Dbxref=Genbank:NP_629920.1,GeneID:1101238;Name=NP_629920.1;Note=SC4H2.17%2C unknown%2C len: 497 aa%3B similar to hypothetical proteins from many organisms e.g. HFLX_ECOLI P25519 GTP-binding protein HflX (426 aa)%2C fasta scores%3B opt: 904 z-score: 715.0 E(): 1.3e-32%2C 39.6%25 identity in 407 aa overlap.Contains PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from aa 235 to 271;gbkey=CDS;gene=SC4H2.17;product=hypothetical protein;protein_id=NP_629920.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6335342	6335365	.	+	.	ID=id7599;Dbxref=GeneID:1101238;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4H2.17
NC_003888.3	RefSeq	stem_loop	6336025	6336070	.	+	.	ID=id7600;Note=hairpin loop with perfect 23 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6336091	6337308	.	-	.	ID=gene5860;Dbxref=GeneID:1101239;Name=SC4H2.18c;gbkey=Gene;gene=SC4H2.18c;gene_biotype=protein_coding;gene_synonym=SC4H2.18c;locus_tag=SCO5797
NC_003888.3	RefSeq	CDS	6336091	6337308	.	-	0	ID=cds5743;Parent=gene5860;Dbxref=Genbank:NP_629921.1,GeneID:1101239;Name=NP_629921.1;Note=SC4H2.18c%2C probable hypothetical protein%2C len: 405 aa%3B Contains probable N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Highly similar to upstream CDS SC4H2.19c (409 aa)%2C fasta scores%3B E(): 0%2C 61.8%25 identity in 406 aa overlap;gbkey=CDS;gene=SC4H2.18c;product=hypothetical protein;protein_id=NP_629921.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6337207	6337239	.	-	.	ID=id7601;Dbxref=GeneID:1101239;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4H2.18c
NC_003888.3	RefSeq	ribosome_entry_site	6337318	6337323	.	-	.	ID=id7602;Note=possible RBS upstream of SC4H2.18c;gbkey=RBS
NC_003888.3	RefSeq	gene	6337406	6338635	.	-	.	ID=gene5861;Dbxref=GeneID:1101240;Name=SC4H2.19c;gbkey=Gene;gene=SC4H2.19c;gene_biotype=protein_coding;gene_synonym=SC4H2.19c;locus_tag=SCO5798
NC_003888.3	RefSeq	CDS	6337406	6338635	.	-	0	ID=cds5744;Parent=gene5861;Dbxref=Genbank:NP_629922.1,GeneID:1101240;Name=NP_629922.1;Note=SC4H2.19c%2C probable hypothetical protein%2C len: 409 aa%3B Contains probable N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Highly similar to downstream CDS SC4H2.18c (405 aa)%2C fasta scores%3B E(): 0%2C 61.8%25 identity in 406 aa overlap;gbkey=CDS;gene=SC4H2.19c;product=hypothetical protein;protein_id=NP_629922.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6338516	6338548	.	-	.	ID=id7603;Dbxref=GeneID:1101240;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4H2.19c
NC_003888.3	RefSeq	ribosome_entry_site	6338644	6338647	.	-	.	ID=id7604;Note=possible RBS upstream of SC4H2.19c;gbkey=RBS
NC_003888.3	RefSeq	gene	6338949	6340547	.	+	.	ID=gene5862;Dbxref=GeneID:1101241;Name=SC4H2.20;gbkey=Gene;gene=SC4H2.20;gene_biotype=protein_coding;gene_synonym=SC4H2.20;locus_tag=SCO5799
NC_003888.3	RefSeq	CDS	6338949	6340547	.	+	0	ID=cds5745;Parent=gene5862;Dbxref=Genbank:NP_629923.1,GeneID:1101241;Name=NP_629923.1;Note=SC4H2.20%2C probable aminotransferase%2C len: 532%3B similar to many e.g. GABT_ECOLI P22256 4-aminobutyrate aminotransferase (426 aa)%2C fasta scores%3B opt: 355 z-score: 385.5 E(): 3e-14%2C 28.8%25 identity in 427 aa overlap. Contains two repetitive regions: GSGSGTGPGSGTGPGTGTGPGTGPGTGPG between aa 82-104%2C and VTVTDAVTVTDAVTDADADAD between aa 241-261%2C that are not present in other aminotransferases. Also contains 2x match to Pfam match to entry aminotran_3 PF00202%2C Aminotransferases class-III pyridoxal-phosphate%2C scores 72.94 and 175.90%2C and TTA leucine codon%3B a potential target for actionof bldA;gbkey=CDS;gene=SC4H2.20;product=aminotransferase;protein_id=NP_629923.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6339172	6339259	.	+	.	ID=id7605;Dbxref=GeneID:1101241;Note=approx. 15 degenerate 6bp repeats;gbkey=repeat_region;gene=SC4H2.20
NC_003888.3	RefSeq	sequence_feature	6339360	6339686	.	+	.	ID=id7606;Dbxref=GeneID:1101241;Note=Pfam match to entry aminotran_3 PF00202%2C Aminotransferases class-III pyridoxal-phosphate%2C score 72.94;gbkey=misc_feature;gene=SC4H2.20
NC_003888.3	RefSeq	repeat_region	6339669	6339732	.	+	.	ID=id7607;Dbxref=GeneID:1101241;Note=approx. 11 degenerate 6 bp repeats;gbkey=repeat_region;gene=SC4H2.20
NC_003888.3	RefSeq	sequence_feature	6339774	6340427	.	+	.	ID=id7608;Dbxref=GeneID:1101241;Note=Pfam match to entry aminotran_3 PF00202%2C Aminotransferases class-III pyridoxal-phosphate%2C score 175.90;gbkey=misc_feature;gene=SC4H2.20
NC_003888.3	RefSeq	sequence_feature	6340521	6340523	.	+	.	ID=id7609;Dbxref=GeneID:1101241;Note=TTA leucine codon%3B potential target for action of bldA;gbkey=misc_feature;gene=SC4H2.20
NC_003888.3	RefSeq	ribosome_entry_site	6340574	6340579	.	+	.	ID=id7610;Note=possible RBS upstream of SC4H2.21;gbkey=RBS
NC_003888.3	RefSeq	gene	6340587	6342533	.	+	.	ID=gene5863;Dbxref=GeneID:1101242;Name=SC4H2.21;gbkey=Gene;gene=SC4H2.21;gene_biotype=protein_coding;gene_synonym=SC4H2.21;locus_tag=SCO5800
NC_003888.3	RefSeq	CDS	6340587	6342533	.	+	0	ID=cds5746;Parent=gene5863;Dbxref=Genbank:NP_629924.1,GeneID:1101242;Name=NP_629924.1;Note=SC4H2.21%2C unknown%2C len: 648 aa%3B similar to proteins implicated in siderophore biosynthesis eg. SW:RHSC_RHIME (EMBL:AF110737) rhizobactin siderophore biosynthesis protein RhsC from Rhizobium meliloti (585 aa) fasta scores%3B opt: 1215%2C Z-score: 1075.6%2C E(): 3.6e-53%2C 40.000%25 identity (41.912%25 ungapped) in 570 aa overlap. Very weak similarity to TR:Q47316 (EMBL:X76100) E. coli plasmid pColV-K30 iucA gene (575 aa)%2C fasta scores%3B opt: 695 z-score: 458.0 E(): 2.6e-18%2C 30.1%25 identity in 555 aa overlap. Contains PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=CDS;gene=SC4H2.21;product=hypothetical protein;protein_id=NP_629924.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6341526	6341558	.	+	.	ID=id7611;Dbxref=GeneID:1101242;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SC4H2.21
NC_003888.3	RefSeq	ribosome_entry_site	6342550	6342555	.	+	.	ID=id7612;Note=possible RBS upstream of SC4H2.22;gbkey=RBS
NC_003888.3	RefSeq	gene	6342563	6343258	.	+	.	ID=gene5864;Dbxref=GeneID:1101243;Name=SC4H2.22;gbkey=Gene;gene=SC4H2.22;gene_biotype=protein_coding;gene_synonym=SC4H2.22;locus_tag=SCO5801
NC_003888.3	RefSeq	CDS	6342563	6343258	.	+	0	ID=cds5747;Parent=gene5864;Dbxref=Genbank:NP_629925.1,GeneID:1101243;Name=NP_629925.1;Note=SC4H2.22%2C unknown%2C len: 231 aa%3B some similarity to C-terminus of Saccharopolyspora erythraea malonyl CoA decarboxylase TR:Q54112 (EMBL:L05192) (417 aa)%2C fasta scores%3B opt: 434 z-score: 630.6 E(): 6.6e-28%2C 40.5%25 identity in 190 aa overlap and similar to the pSymA plasmid borne TR:AAK65919 (EMBL:AE007311) Rhizobium meliloti (Sinorhizobium meliloti) RhbD rhizobactin siderophore biosynthesis protein%2C 196 aa%3B fasta scores: opt: 387 Z-score: 454.4 E(): 1.1e-17%3B 35.106%25 identity in 188 aa overlap;gbkey=CDS;gene=SC4H2.22;product=hypothetical protein;protein_id=NP_629925.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6343569	6343574	.	+	.	ID=id7613;Note=possible RBS upstream of SC4H2.23;gbkey=RBS
NC_003888.3	RefSeq	gene	6343581	6345575	.	+	.	ID=gene5865;Dbxref=GeneID:1101244;Name=SC4H2.23;gbkey=Gene;gene=SC4H2.23;gene_biotype=protein_coding;gene_synonym=SC4H2.23;locus_tag=SCO5802
NC_003888.3	RefSeq	CDS	6343581	6345575	.	+	0	ID=cds5748;Parent=gene5865;Dbxref=Genbank:NP_629926.1,GeneID:1101244;Name=NP_629926.1;Note=SC4H2.23%2C probable ATP-dependent helicase%2C len: 664 aa%3B similar to e.g. DING_ECOLI P27296 probable ATP-dependent helicase dinG (716 aa)%2C fasta scores opt: 272 z-score: 409.8 E(): 1.3e-15%2C 26.5%25 identity in 686 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC4H2.23;product=ATP-dependent helicase;protein_id=NP_629926.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6343716	6343739	.	+	.	ID=id7614;Dbxref=GeneID:1101244;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4H2.23
NC_003888.3	RefSeq	gene	6345664	6346368	.	-	.	ID=gene5866;Dbxref=GeneID:1101245;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;gene_synonym=lexA;locus_tag=SCO5803
NC_003888.3	RefSeq	CDS	6345664	6346368	.	-	0	ID=cds5749;Parent=gene5866;Dbxref=Genbank:NP_629927.1,GeneID:1101245;Name=NP_629927.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;gene=lexA;product=LexA repressor;protein_id=NP_629927.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6347010	6347015	.	+	.	ID=id7615;Note=possible RBS upstream of SC4H2.25;gbkey=RBS
NC_003888.3	RefSeq	gene	6347027	6347575	.	+	.	ID=gene5867;Dbxref=GeneID:1101246;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;gene_synonym=SC4H2.25;locus_tag=SCO5804
NC_003888.3	RefSeq	CDS	6347027	6347575	.	+	0	ID=cds5750;Parent=gene5867;Dbxref=Genbank:NP_629928.1,GeneID:1101246;Name=NP_629928.1;Note=SC4H2.25%2C unknown%2C len: 182 aa%3B similar to hypothetical genes from a wide range of organisms e.g. YBAD_ECOLI P25538 hypothetical 17.2 kd protein in tsx-ribG (149 aa)%2C fasta scores%3B opt: 426 z-score: 367.0 E(): 3.2e-13%2C 43.0%25 identity in 149 aa overlap;gbkey=CDS;gene=nrdR;product=transcriptional regulator NrdR;protein_id=NP_629928.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6347735	6347739	.	+	.	ID=id7616;Note=possible RBS upstream of nrdJ;gbkey=RBS
NC_003888.3	RefSeq	gene	6347744	6350647	.	+	.	ID=gene5868;Dbxref=GeneID:1101247;Name=nrdJ;gbkey=Gene;gene=nrdJ;gene_biotype=protein_coding;gene_synonym=nrdJ;locus_tag=SCO5805
NC_003888.3	RefSeq	CDS	6347744	6350647	.	+	0	ID=cds5751;Parent=gene5868;Dbxref=Genbank:NP_629929.1,GeneID:1101247;Name=NP_629929.1;Note=catalyzes the reduction of ribonucleotides to deoxyribonucleotides%3B the rate-limiting step in dNTP synthesis;gbkey=CDS;gene=nrdJ;product=vitamin B12-dependent ribonucleotide reductase;protein_id=NP_629929.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6347775	6350647	.	+	.	ID=id7617;Dbxref=GeneID:1101247;Note=approx. 90%25 match to EMBL:SCAJ4870 AJ224870 Streptomyces clavuligerus nrdJ gene%2C partial CDS from: 2 to: 2856;gbkey=misc_feature;gene=nrdJ
NC_003888.3	RefSeq	sequence_feature	6348140	6348535	.	+	.	ID=id7618;Dbxref=GeneID:1101247;Note=Pfam match to entry ribonucleo_red PF00317%2C Ribonucleotide reductase%2C score 75.54;gbkey=misc_feature;gene=nrdJ
NC_003888.3	RefSeq	sequence_feature	6348704	6349834	.	+	.	ID=id7619;Dbxref=GeneID:1101247;Note=Pfam match to entry ribonucleo_red PF00317%2C Ribonucleotide reductase%2C score 86.71;gbkey=misc_feature;gene=nrdJ
NC_003888.3	RefSeq	gene	6350725	6351333	.	-	.	ID=gene5869;Dbxref=GeneID:1101248;Name=SC4H2.27c;gbkey=Gene;gene=SC4H2.27c;gene_biotype=protein_coding;gene_synonym=SC4H2.27c;locus_tag=SCO5806
NC_003888.3	RefSeq	CDS	6350725	6351333	.	-	0	ID=cds5752;Parent=gene5869;Dbxref=Genbank:NP_629930.1,GeneID:1101248;Name=NP_629930.1;Note=SC4H2.27c%2C hypotehtical protein%2C len: 202 aa%3B contains PS00017 ATP/GTP-binding site motif A (P-loop). Start site uncertain. Similar to TR:CAC37539 (EMBL:AL590982) Streptomyces coelicolor conserved hypothetical protein SCIF3.20c%2C 190 aa%3B fasta scores: opt: 685 Z-score: 693.9 E(): 5.1e-31%3B 56.111%25 identityin 180 aa overlap;gbkey=CDS;gene=SC4H2.27c;product=hypothetical protein;protein_id=NP_629930.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6351259	6351282	.	-	.	ID=id7620;Dbxref=GeneID:1101248;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4H2.27c
NC_003888.3	RefSeq	gene	6351356	6352033	.	+	.	ID=gene5870;Dbxref=GeneID:1101249;Name=SC4H2.28;gbkey=Gene;gene=SC4H2.28;gene_biotype=protein_coding;gene_synonym=SC4H2.28;locus_tag=SCO5807
NC_003888.3	RefSeq	CDS	6351356	6352033	.	+	0	ID=cds5753;Parent=gene5870;Dbxref=Genbank:NP_629931.1,GeneID:1101249;Name=NP_629931.1;Note=SC4H2.28%2C unknown%2C len: 225 aa%3B start site uncertain;gbkey=CDS;gene=SC4H2.28;product=hypothetical protein;protein_id=NP_629931.1;transl_table=11
NC_003888.3	RefSeq	gene	6352147	6352806	.	+	.	ID=gene5871;Dbxref=GeneID:1101250;Name=SC4H2.29;gbkey=Gene;gene=SC4H2.29;gene_biotype=protein_coding;gene_synonym=SC4H2.29;locus_tag=SCO5808
NC_003888.3	RefSeq	CDS	6352147	6352806	.	+	0	ID=cds5754;Parent=gene5871;Dbxref=Genbank:NP_629932.1,GeneID:1101250;Name=NP_629932.1;Note=SC4H2.29%2C unknown%2C len: 219 aa%3B highly similar to several eukaryotic hypothetical proteins e.g. Arabidopsis thaliana TR:O04035 (EMBL:AC000106) F7G19.18 (281 aa)%2C fasta scores%3B opt: 482 z-score: 1008.5 E(): 0%2C 47.0%25 identity in 217 aa overlap. Contains PS00175 Phosphoglycerate mutase family phosphohistidine signature and Pfam match to entry PGAM PF00300%2C Phosphoglycerate mutase family%2C score 20.30;gbkey=CDS;gene=SC4H2.29;product=hypothetical protein;protein_id=NP_629932.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6352168	6352488	.	+	.	ID=id7621;Dbxref=GeneID:1101250;Note=Pfam match to entry PGAM PF00300%2C Phosphoglycerate mutase family%2C score 20.30;gbkey=misc_feature;gene=SC4H2.29
NC_003888.3	RefSeq	sequence_feature	6352171	6352200	.	+	.	ID=id7622;Dbxref=GeneID:1101250;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature;gbkey=misc_feature;gene=SC4H2.29
NC_003888.3	RefSeq	gene	6352819	6353724	.	+	.	ID=gene5872;Dbxref=GeneID:1101251;Name=SC4H2.30;gbkey=Gene;gene=SC4H2.30;gene_biotype=protein_coding;gene_synonym=SC4H2.30;locus_tag=SCO5809
NC_003888.3	RefSeq	CDS	6352819	6353724	.	+	0	ID=cds5755;Parent=gene5872;Dbxref=Genbank:NP_629933.1,GeneID:1101251;Name=NP_629933.1;Note=SC4H2.30%2C possible hydrolase%2C len: 301 aa%3B some similarity to several e.g. DRAG_RHORU P14300 adp-ribosylglycohydrolase (294 aa)%2C fasta scores%3B opt: 92 z-score: 265.8 E(): 1.4e-07%2C 25.3%25 identity in 296 aa overlap;gbkey=CDS;gene=SC4H2.30;product=hydrolase;protein_id=NP_629933.1;transl_table=11
NC_003888.3	RefSeq	gene	6354012	6355559	.	-	.	ID=gene5873;Dbxref=GeneID:1101252;Name=SC4H2.31c;gbkey=Gene;gene=SC4H2.31c;gene_biotype=protein_coding;gene_synonym=SC4H2.31c;locus_tag=SCO5810
NC_003888.3	RefSeq	CDS	6354012	6355559	.	-	0	ID=cds5756;Parent=gene5873;Dbxref=Genbank:NP_629934.1,GeneID:1101252;Name=NP_629934.1;Note=SC4H2.31c%2C probable transmembrane efflux protein%2C len: 515 aa%3B similar to many diverse efflux proteins e.g. CMCT_NOCLA Q04733 cephamycin export protein cmct (486 aa)%2C fasta scores%3B opt: 1059 z-score: 1207.4 E(): 0%2C 40.2%25 identity in 433 aa overlap%2C and PUR8_STRLP P42670 puromycin resistance protein pur8 (503 aa)%2C fasta scores%3B opt: 1135 z-score: 1187.0 E(): 0%2C 39.8%25 identity in 492 aa overlap. Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site and Pfam match to entry sugar_tr PF00083%2C Sugar (and other) transporters%2C score 33.27;gbkey=CDS;gene=SC4H2.31c;product=transmembrane efflux protein;protein_id=NP_629934.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6354030	6355493	.	-	.	ID=id7623;Dbxref=GeneID:1101252;Note=Pfam match to entry sugar_tr PF00083%2C Sugar (and other) transporters%2C score 33.27;gbkey=misc_feature;gene=SC4H2.31c
NC_003888.3	RefSeq	sequence_feature	6354963	6356080	.	+	.	ID=id7624;Note=overlap with Cosmid St5B8 from:1 to: 1121;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6355467	6355499	.	-	.	ID=id7625;Dbxref=GeneID:1101252;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4H2.31c
NC_003888.3	RefSeq	stem_loop	6355583	6355650	.	+	.	ID=id7626;Note=hairpin loop with 20/22 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	6355734	6355737	.	+	.	ID=id7627;Note=possible RBS upstream of SC4H2.32;gbkey=RBS
NC_003888.3	RefSeq	gene	6355747	6356367	.	+	.	ID=gene5874;Dbxref=GeneID:1101253;Name=SC4H2.32;gbkey=Gene;gene=SC4H2.32;gene_biotype=protein_coding;gene_synonym=SC4H2.32;locus_tag=SCO5811
NC_003888.3	RefSeq	CDS	6355747	6356367	.	+	0	ID=cds5757;Parent=gene5874;Dbxref=Genbank:NP_733675.1,GeneID:1101253;Name=NP_733675.1;Note=SC5B8.01%2C probable transcriptional regulator%2C partial CDS%2C overlaps and extends SC4H2.32%2C len: > 140 aa~SC4H2.32%2C probable transcriptional regulator%2C partial CDS%2C len: >111 aa%3B similar to many e.g. TR:D1022772 (EMBL:D85417) HemR from Propionibacterium freudenreichii (243 aa)%2C fasta scores%3B opt: 262 z-score: 366.7 E(): 3.3e-13%2C 46.5%25 identity in 101 aa overlap. Contains Pfam match to entry tetR PF00440%2C Bacterial regulatory proteins%2C tetR family%2C score 29.06;gbkey=CDS;gene=SC4H2.32;product=transcriptional regulator;protein_id=NP_733675.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6355822	6355962	.	+	.	ID=id7628;Dbxref=GeneID:1101253;Note=Pfam match to entry tetR PF00440%2C Bacterial regulatory proteins%2C tetR family%2C score 29.06;gbkey=misc_feature;gene=SC4H2.32
NC_003888.3	RefSeq	sequence_feature	6355945	6356080	.	+	.	ID=id7629;Dbxref=GeneID:1101253;Note=overlap with cosmid 4H2 from: 38265 to: 38400;gbkey=misc_feature;gene=SC4H2.32
NC_003888.3	RefSeq	gene	6356449	6357150	.	+	.	ID=gene5875;Dbxref=GeneID:1101254;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=SCO5812
NC_003888.3	RefSeq	CDS	6356449	6357150	.	+	0	ID=cds5758;Parent=gene5875;Dbxref=Genbank:NP_629935.1,GeneID:1101254;Name=NP_629935.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=NP_629935.1;transl_table=11
NC_003888.3	RefSeq	gene	6357219	6357857	.	+	.	ID=gene5876;Dbxref=GeneID:1101255;Name=SC5B8.03;gbkey=Gene;gene=SC5B8.03;gene_biotype=protein_coding;gene_synonym=SC5B8.03;locus_tag=SCO5813
NC_003888.3	RefSeq	CDS	6357219	6357857	.	+	0	ID=cds5759;Parent=gene5876;Dbxref=Genbank:NP_629936.1,GeneID:1101255;Name=NP_629936.1;Note=SC5B8.03%2C unknown%2C len: 212 aa%3B highly Proline rich in N-terminus;gbkey=CDS;gene=SC5B8.03;product=hypothetical protein;protein_id=NP_629936.1;transl_table=11
NC_003888.3	RefSeq	gene	6358172	6358786	.	-	.	ID=gene5877;Dbxref=GeneID:1101256;Name=SC5B8.04c;gbkey=Gene;gene=SC5B8.04c;gene_biotype=protein_coding;gene_synonym=SC5B8.04c;locus_tag=SCO5814
NC_003888.3	RefSeq	CDS	6358172	6358786	.	-	0	ID=cds5760;Parent=gene5877;Dbxref=Genbank:NP_629937.1,GeneID:1101256;Name=NP_629937.1;Note=SC5B8.04c%2C unknown%2C len: 204 aa;gbkey=CDS;gene=SC5B8.04c;product=hypothetical protein;protein_id=NP_629937.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6358790	6358794	.	-	.	ID=id7630;Note=possible RBS upstream of SC5B8.04c;gbkey=RBS
NC_003888.3	RefSeq	gene	6359074	6361233	.	+	.	ID=gene5878;Dbxref=GeneID:1101257;Name=SCO5815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5815
NC_003888.3	RefSeq	CDS	6359074	6361233	.	+	0	ID=cds5761;Parent=gene5878;Dbxref=Genbank:NP_629938.1,GeneID:1101257;Name=NP_629938.1;Note=SC5B8.05%2C probable ATP-dependent DNA helicase%2C len:7 19 aa%3B similar in N-terminal half to many e.g. RECQ_ECOLIP1 5043 atp-dependent dna helicase recq (607 aa)%2C fasta score s%3B opt: 546 z-score: 615.9 E(): 4.1e-27%2C 35.9%25 identity in 362 aa overlap. Contains PS00690 DEAH-box subfamily ATP-dep endent helicases signature and Pfam match to entry helicase _C PF00271%2C Helicases conserved C-terminal domain%2C score 91 .14;gbkey=CDS;product=ATP-dependent DNA helicase;protein_id=NP_629938.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6359518	6359547	.	+	.	ID=id7631;Dbxref=GeneID:1101257;Note=PS00690 DEAH-box subfamily ATP-dependent helicases s ignature;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6359860	6360105	.	+	.	ID=id7632;Dbxref=GeneID:1101257;Note=Pfam match to entry helicase_C PF00271%2C Helicases co nserved C-terminal domain%2C score 91.14;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6361399	6363003	.	+	.	ID=gene5879;Dbxref=GeneID:1101258;Name=SC5B8.06;gbkey=Gene;gene=SC5B8.06;gene_biotype=protein_coding;gene_synonym=SC5B8.06;locus_tag=SCO5816
NC_003888.3	RefSeq	CDS	6361399	6363003	.	+	0	ID=cds5762;Parent=gene5879;Dbxref=Genbank:NP_629939.1,GeneID:1101258;Name=NP_629939.1;Note=SC5B8.06%2C unknown%2C len: 534 aa. Contains Probable coiled-coil from 234 to 270;gbkey=CDS;gene=SC5B8.06;product=hypothetical protein;protein_id=NP_629939.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6362991	6362994	.	+	.	ID=id7633;Dbxref=GeneID:1101258;Note=possible RBS upstream of SC5B8.07;gbkey=RBS;gene=SC5B8.06
NC_003888.3	RefSeq	gene	6363009	6363893	.	+	.	ID=gene5880;Dbxref=GeneID:1101259;Name=SCO5817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5817
NC_003888.3	RefSeq	CDS	6363009	6363893	.	+	0	ID=cds5763;Parent=gene5880;Dbxref=Genbank:NP_629940.1,GeneID:1101259;Name=NP_629940.1;Note=SC5B8.07%2C possible DNA hydrolase with mutT domain%2C l en: 294 aa%3B similar in part to many hypothetical proteins e .g Synechocystis sp. TR:P74291 (EMBL:D90913) (261 aa)%2C fasta scores%3B opt: 241 z-score: 358.0 E(): 9.6e-13%2C 34.7%25 ident ity in 251 aa overlap. Contains PS00893 mutT domain signatu re and Pfam match to entry mutT PF00293%2C Bacterial mutT pro tein%2C score 39.86;gbkey=CDS;product=DNA hydrolase;protein_id=NP_629940.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6363219	6363344	.	+	.	ID=id7634;Dbxref=GeneID:1101259;Note=Pfam match to entry mutT PF00293%2C Bacterial mutT p rotein%2C score 39.86;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6363276	6363335	.	+	.	ID=id7635;Dbxref=GeneID:1101259;Note=PS00893 mutT domain signature;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6363949	6366183	.	+	.	ID=gene5881;Dbxref=GeneID:1101260;Name=SCO5818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5818
NC_003888.3	RefSeq	CDS	6363949	6366183	.	+	0	ID=cds5764;Parent=gene5881;Dbxref=Genbank:NP_629941.1,GeneID:1101260;Name=NP_629941.1;Note=SC5B8.08%2C probable ABC transporter%2C len: 744 aa%3B N-t erminus is similar to several ABC transporters e.g. NODI_RH IGA P50332 from Rhizobium galegae nodulation atp-binding pr otein (347 aa)%2C fasta scores%3B opt: 285 z-score: 225.2 E():2 .4e-05%2C 34.5%25 identity in 197 aa overlap%2C and contains PS00 017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C score 135.08. Th e C-terminus (approx aa 500-744) contains several probable transmembrane domains. In the centre is a repetitive region containing 10 copies of a degenerate 7 aa Proline-rich rep eat.;gbkey=CDS;product=ABC transporter;protein_id=NP_629941.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6364033	6364560	.	+	.	ID=id7636;Dbxref=GeneID:1101260;Note=Pfam match to entry ABC_tran PF00005%2C ABC transporte rs%2C score 135.08;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6364054	6364077	.	+	.	ID=id7637;Dbxref=GeneID:1101260;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6364408	6367887	.	+	.	ID=id7638;Note=97.5%25 match to SCA32WHIH AJ003022 Streptomyces coeli color whiH gene from: 27 to: 3500;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	6365089	6365304	.	+	.	ID=id7639;Dbxref=GeneID:1101260;Note=10 x 21bp degenerate repeats;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	6365114	6365234	.	+	.	ID=id7640;Dbxref=GeneID:1101260;Note=sequence from single clone only;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6366341	6366345	.	+	.	ID=id7641;Note=possible RBS upstream of whiH;gbkey=RBS
NC_003888.3	RefSeq	gene	6366349	6367236	.	+	.	ID=gene5882;Dbxref=GeneID:1101261;Name=SCO5819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5819
NC_003888.3	RefSeq	CDS	6366349	6367236	.	+	0	ID=cds5765;Parent=gene5882;Dbxref=Genbank:NP_629942.1,GeneID:1101261;Name=NP_629942.1;Note=SC5B8.09%2C whiH%2C sporulation transcription factor%2C le n: 295%3B almost identical to whiH protein TR:E1198707 (EMBL: AJ003022) (295 aa)%2C 99.0%25 identity in 295 aa overlap. First of several possible start sites shown. Also similar to man y transcriptional regulators%2C e.g. DGOR_ECOLI P31460 galact onate operon transcriptional regulator (177 aa)%2C fasta scor es%3B opt: 240 z-score: 251.2 E(): 8.5e-07%2C 30.1%25 identity in 173 aa overlap. Contains Pfam match to entry gntR PF00392%2C Bacterial regulatory proteins%2C gntR family%2C score 56.85;gbkey=CDS;product=sporulation transcription factor%2C WhiH;protein_id=NP_629942.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6366556	6366732	.	+	.	ID=id7642;Dbxref=GeneID:1101261;Note=Pfam match to entry gntR PF00392%2C Bacterial regulato ry proteins%2C gntR family%2C score 56.85;gbkey=misc_feature
NC_003888.3	RefSeq	stem_loop	6367308	6367357	.	+	.	ID=id7643;Note=hairpin loop with 22/23 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	sequence_feature	6367325	6369370	.	+	.	ID=id7644;Note=98.9%25 match to SCCSB1 X52983 Streptomyces coelicolor hrdB gene for principal sigma factor from: 1 to: 2044;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6367655	6367659	.	+	.	ID=id7645;Note=possible RBS upstream of hrdB;gbkey=RBS
NC_003888.3	RefSeq	gene	6367665	6369200	.	+	.	ID=gene5883;Dbxref=GeneID:1101262;Name=hrdB;gbkey=Gene;gene=hrdB;gene_biotype=protein_coding;gene_synonym=hrdB,SC5B8.10;locus_tag=SCO5820
NC_003888.3	RefSeq	CDS	6367665	6369200	.	+	0	ID=cds5766;Parent=gene5883;Dbxref=Genbank:NP_629943.1,GeneID:1101262;Name=NP_629943.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released;gbkey=CDS;gene=hrdB;product=RNA polymerase sigma factor;protein_id=NP_629943.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6368049	6368153	.	+	.	ID=id7646;Dbxref=GeneID:1101262;Note=7 x 15bp degenerate repeats;gbkey=repeat_region;gene=hrdB
NC_003888.3	RefSeq	sequence_feature	6368478	6369161	.	+	.	ID=id7647;Dbxref=GeneID:1101262;Note=Pfam match to entry sigma70 PF00140%2C Sigma-70 factor s%2C score 477.38;gbkey=misc_feature;gene=hrdB
NC_003888.3	RefSeq	sequence_feature	6368568	6368609	.	+	.	ID=id7648;Dbxref=GeneID:1101262;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=hrdB
NC_003888.3	RefSeq	sequence_feature	6369075	6369155	.	+	.	ID=id7649;Dbxref=GeneID:1101262;Note=PS00716 Sigma-70 factors family signature 2;gbkey=misc_feature;gene=hrdB
NC_003888.3	RefSeq	ribosome_entry_site	6369357	6369361	.	+	.	ID=id7650;Note=possible RBS upstream of SC5B8.11;gbkey=RBS
NC_003888.3	RefSeq	gene	6369367	6370224	.	+	.	ID=gene5884;Dbxref=GeneID:1101263;Name=SCO5821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5821
NC_003888.3	RefSeq	CDS	6369367	6370224	.	+	0	ID=cds5767;Parent=gene5884;Dbxref=Genbank:NP_629944.1,GeneID:1101263;Name=NP_629944.1;Note=SC5B8.11%2C probable serine protease%2C len: 285 aa%3B similar to many members of the trypsin family e.g. TRYP_SACERP 24664 from saccharopolyspora erythraea (streptomyces erythraeus) (227 aa)%2C fasta scores%3B opt: 523 z-score: 655.1 E(): 2.7e-29%2C 44.7%25 identity in 237 aa overlap. Contains PS00134 Serine proteases%2C trypsin family%2C histidine active site%2C PS00135 Serine proteases%2C trypsin family%2C serine active site and Pfam match to entry trypsin PF00089%2C Trypsin%2C score 228.48;gbkey=CDS;product=serine protease;protein_id=NP_629944.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6369472	6370182	.	+	.	ID=id7651;Dbxref=GeneID:1101263;Note=Pfam match to entry trypsin PF00089%2C Trypsin%2C score 228.48;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6369601	6369618	.	+	.	ID=id7652;Dbxref=GeneID:1101263;Note=PS00134 Serine proteases%2C trypsin family%2C histidinea ctive site;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6370045	6370080	.	+	.	ID=id7653;Dbxref=GeneID:1101263;Note=PS00135 Serine proteases%2C trypsin family%2C serine act ive site;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6370993	6370997	.	+	.	ID=id7654;Note=possible RBS upstream of gyrB;gbkey=RBS
NC_003888.3	RefSeq	gene	6371006	6373129	.	+	.	ID=gene5885;Dbxref=GeneID:1101264;Name=SCO5822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5822
NC_003888.3	RefSeq	CDS	6371006	6373129	.	+	0	ID=cds5768;Parent=gene5885;Dbxref=Genbank:NP_629945.1,GeneID:1101264;Name=NP_629945.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=NP_629945.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6371087	6372865	.	+	.	ID=id7655;Dbxref=GeneID:1101264;Note=Pfam match to entry DNA_topoisoII PF00204%2C DNA topoi somerase II%2C score 609.86;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6372455	6372481	.	+	.	ID=id7656;Dbxref=GeneID:1101264;Note=PS00177 DNA topoisomerase II signature;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6373339	6373343	.	+	.	ID=id7657;Note=possible RBS upstream of SC5B8.13;gbkey=RBS
NC_003888.3	RefSeq	gene	6373348	6373872	.	+	.	ID=gene5886;Dbxref=GeneID:1101265;Name=SCO5823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5823
NC_003888.3	RefSeq	CDS	6373348	6373872	.	+	0	ID=cds5769;Parent=gene5886;Dbxref=Genbank:NP_629946.1,GeneID:1101265;Name=NP_629946.1;Note=SC5B8.13%2C probable integral membrane protein%2C len: 1 74 aa%3B contains five possible transmembrane domains;gbkey=CDS;product=hypothetical protein;protein_id=NP_629946.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6373858	6373863	.	+	.	ID=id7658;Dbxref=GeneID:1101265;Note=possible RBS upstream of SC5B8.14;gbkey=RBS
NC_003888.3	RefSeq	gene	6373869	6375023	.	+	.	ID=gene5887;Dbxref=GeneID:1101266;Name=SC5B8.14;gbkey=Gene;gene=SC5B8.14;gene_biotype=protein_coding;gene_synonym=SC5B8.14;locus_tag=SCO5824
NC_003888.3	RefSeq	CDS	6373869	6375023	.	+	0	ID=cds5770;Parent=gene5887;Dbxref=Genbank:NP_629947.1,GeneID:1101266;Name=NP_629947.1;Note=SC5B8.14%2C probable two-component sensor%2C len: 384 aa%3B N-termius has six possible transmembrane domains%2C C-terminus is similar to histidine kinase domain of many two-component sensors e.g. NARQ_ECOLI P27896 nitrate/nitrite sensor (566 aa) fasta scores%3B opt: 220 z-score: 227.4 E(): 1.8e-0 5%2C 32.3%25 identity in 198 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5B8.14;product=two-component sensor;protein_id=NP_629947.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6375009	6375014	.	+	.	ID=id7659;Dbxref=GeneID:1101266;Note=possible RBS upstream of SC5B8.15;gbkey=RBS;gene=SC5B8.14
NC_003888.3	RefSeq	gene	6375020	6375709	.	+	.	ID=gene5888;Dbxref=GeneID:1101267;Name=SC5B8.15;gbkey=Gene;gene=SC5B8.15;gene_biotype=protein_coding;gene_synonym=SC5B8.15;locus_tag=SCO5825
NC_003888.3	RefSeq	CDS	6375020	6375709	.	+	0	ID=cds5771;Parent=gene5888;Dbxref=Genbank:NP_629948.1,GeneID:1101267;Name=NP_629948.1;Note=SC5B8.15%2C probable two-component transcriptional regulator%2C len: 229 aa%3B similar to many e.g. DEGU_BACSU P13800 transcriptional regulator (229 aa)%2C fasta scores%3B opt: 485 z-score: 582.9 E(): 2.8e-25%2C 37.1%25 identity in 221 aa overlap. Contains PS00622 Bacterial regulatory proteins%2C luxR f amily signature%2C Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 142.77%2C Pfam match to entry GerE PF00196%2C Bacterial regulatory proteins%2C luxR family%2C score 80.81%2C and probable helix-turn-helix from aa 180-201 (Score 1092%2C +2.91 SD);gbkey=CDS;gene=SC5B8.15;product=two-component response regulator;protein_id=NP_629948.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6375047	6375388	.	+	.	ID=id7660;Dbxref=GeneID:1101267;Note=Pfam match to entry response_reg PF00072%2C Response r egulator receiver domain%2C score 142.77;gbkey=misc_feature;gene=SC5B8.15
NC_003888.3	RefSeq	sequence_feature	6375500	6375697	.	+	.	ID=id7661;Dbxref=GeneID:1101267;Note=Pfam match to entry GerE PF00196%2C Bacterial regulato ry proteins%2C luxR family%2C score 80.81;gbkey=misc_feature;gene=SC5B8.15
NC_003888.3	RefSeq	sequence_feature	6375551	6375634	.	+	.	ID=id7662;Dbxref=GeneID:1101267;Note=PS00622 Bacterial regulatory proteins%2C luxR family s ignature;gbkey=misc_feature;gene=SC5B8.15
NC_003888.3	RefSeq	gene	6375779	6376357	.	+	.	ID=gene5889;Dbxref=GeneID:1101268;Name=SC5B8.16;gbkey=Gene;gene=SC5B8.16;gene_biotype=protein_coding;gene_synonym=SC5B8.16;locus_tag=SCO5826
NC_003888.3	RefSeq	CDS	6375779	6376357	.	+	0	ID=cds5772;Parent=gene5889;Dbxref=Genbank:NP_629949.1,GeneID:1101268;Name=NP_629949.1;Note=SC5B8.16%2C membrane protein%2C len: 192 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5B8.16;product=hypothetical protein;protein_id=NP_629949.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6376341	6376344	.	+	.	ID=id7663;Dbxref=GeneID:1101268;Note=possible RBS upstream of SC5B8.17;gbkey=RBS;gene=SC5B8.16
NC_003888.3	RefSeq	gene	6376354	6377946	.	+	.	ID=gene5890;Dbxref=GeneID:1101269;Name=SCO5827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5827
NC_003888.3	RefSeq	CDS	6376354	6377946	.	+	0	ID=cds5773;Parent=gene5890;Dbxref=Genbank:NP_629950.1,GeneID:1101269;Name=NP_629950.1;Note=SC5B8.17%2C probable transmembrane transport protein%2C len: 530 aa%3B member of the sodium:solute symporter family%2C similar to many e.g. YJCG_ECOLI P32705 hypothetical protein %2C (549 aa)%2C fasta scores%3B opt: 935 z-score: 1534.8 E(): 0%2C 43.6%25 identity in 530 aa overlap. Contains Pfam match to en try SSF PF00474%2C Sodium:solute symporter family%2C score 338. 37;gbkey=CDS;product=transmembrane transport protein;protein_id=NP_629950.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6376465	6377712	.	+	.	ID=id7664;Dbxref=GeneID:1101269;Note=Pfam match to entry SSF PF00474%2C Sodium:solute sympo rter family%2C score 338.37;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6377983	6378663	.	-	.	ID=gene5891;Dbxref=GeneID:1101270;Name=SC5B8.18c;gbkey=Gene;gene=SC5B8.18c;gene_biotype=protein_coding;gene_synonym=SC5B8.18c;locus_tag=SCO5828
NC_003888.3	RefSeq	CDS	6377983	6378663	.	-	0	ID=cds5774;Parent=gene5891;Dbxref=Genbank:NP_629951.1,GeneID:1101270;Name=NP_629951.1;Note=SC5B8.18c%2C probable two-component transcriptional regulator%2C len: 226 aa%3B similar to many e.g. CITB_KLEPN P5268 8 transcriptional regulator from klebsiella pneumoniae (23 4 aa)%2C fasta scores%3B opt: 319 z-score: 394.9 E(): 8.3e-15%2C 30.8%25 identity in 224 aa overlap. Contains Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 117.43 and probable helix-turn-helix from aa 176- 197 (Score 2073%2C +6.25 SD);gbkey=CDS;gene=SC5B8.18c;product=two-component transcriptional regulator;protein_id=NP_629951.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6378316	6378660	.	-	.	ID=id7665;Dbxref=GeneID:1101270;Note=Pfam match to entry response_reg PF00072%2C Response r egulator receiver domain%2C score 117.43;gbkey=misc_feature;gene=SC5B8.18c
NC_003888.3	RefSeq	gene	6378660	6380360	.	-	.	ID=gene5892;Dbxref=GeneID:1101271;Name=SC5B8.19c;gbkey=Gene;gene=SC5B8.19c;gene_biotype=protein_coding;gene_synonym=SC5B8.19c;locus_tag=SCO5829
NC_003888.3	RefSeq	CDS	6378660	6380360	.	-	0	ID=cds5775;Parent=gene5892;Dbxref=Genbank:NP_629952.1,GeneID:1101271;Name=NP_629952.1;Note=SC5B8.19c%2C probable two-component sensor%2C len: 566 aa%3B similar to many e.g. CITA_KLEPN P52687 klebsiella pneumoniae sensor kinase (547 aa)%2C fasta scores%3B opt: 604 z-score: 460.1 E(): 2e-18%2C 27.1%25 identity in 554 aa overlap. Contains Pfam match to entry signal PF00512%2C Signal C terminal domain%2C score 98.50. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5B8.19c;product=two-component sensor;protein_id=NP_629952.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6378671	6378676	.	-	.	ID=id7666;Dbxref=GeneID:1101271;Note=possible RBS upstream of SC5B8.18c;gbkey=RBS;gene=SC5B8.19c
NC_003888.3	RefSeq	sequence_feature	6378738	6379367	.	-	.	ID=id7667;Dbxref=GeneID:1101271;Note=Pfam match to entry signal PF00512%2C Signal C termina l domain%2C score 98.50;gbkey=misc_feature;gene=SC5B8.19c
NC_003888.3	RefSeq	gene	6380416	6381357	.	-	.	ID=gene5893;Dbxref=GeneID:1101272;Name=SCO5830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5830
NC_003888.3	RefSeq	CDS	6380416	6381357	.	-	0	ID=cds5776;Parent=gene5893;Dbxref=Genbank:NP_629953.1,GeneID:1101272;Name=NP_629953.1;Note=SC5B8.20c%2C unknown%2C len: 313 aa%3B very weak similarit y to a hypothetical protein from Synechocystis TR:P72597 (E MBL:D90899) (321 aa)%2C fasta scores%3B opt: 232 z-score: 291.9 E(): 4.6e-09%2C 23.1%25 identity in 268 aa overlap;gbkey=CDS;product=hypothetical protein;protein_id=NP_629953.1;transl_table=11
NC_003888.3	RefSeq	gene	6381412	6382677	.	-	.	ID=gene5894;Dbxref=GeneID:1101273;Name=SCO5831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5831
NC_003888.3	RefSeq	CDS	6381412	6382677	.	-	0	ID=cds5777;Parent=gene5894;Dbxref=Genbank:NP_629954.1,GeneID:1101273;Name=NP_629954.1;Note=SC5B8.21c%2C citrate synthase-like protein%2C len: 421 a a%3B similar to citrate synthase from many organisms e.g. CIS Y_THIFE P51045 thiobacillus ferrooxidans. citrate synthase (386 aa)%2C fasta scores%3B opt: 387 z-score: 460.4 E(): 1.9e-1 8%2C 30.2%25 identity in 384 aa overlap. Contains Pfam match to entry citrate_synt PF00285%2C Citrate synthase%2C score 81.00 and probable helix-turn-helix at aa 17-38 (Score 1757%2C +5.1 7 SD). Also similar to upstream gene SC5B8.22 (390 aa) E(): 4.5e-11%2C 32.8%25 identity in 351 aa overlap.;gbkey=CDS;product=citrate synthase-like protein;protein_id=NP_629954.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6381460	6382023	.	-	.	ID=id7668;Dbxref=GeneID:1101273;Note=Pfam match to entry citrate_synt PF00285%2C Citrate sy nthase%2C score 81.00;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6382802	6383974	.	+	.	ID=gene5895;Dbxref=GeneID:1101274;Name=SCO5832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5832
NC_003888.3	RefSeq	CDS	6382802	6383974	.	+	0	ID=cds5778;Parent=gene5895;Dbxref=Genbank:NP_629955.1,GeneID:1101274;Name=NP_629955.1;Note=SC5B8.22%2C citrate synthase%2C len: 390 aa %3B similar to citrate synthase from many organisms e.g. CISZ _BACSU P39120 bacillus subtilis. citrate synthase i (372 aa )%2C fasta scores%3B opt: 729 z-score: 877.4 E(): 0%2C 35.5%25 iden tity in 372 aa overlap. Contains PS00480 Citrate synthase s ignature and Pfam match to entry citrate_synt PF00285%2C Citr ate synthase%2C score 314.55. Also similar to downstream gene SC5B8.21c (421 aa) E(): 2.6e-14%2C 32.4%25 identity in 352 aa overlap;gbkey=CDS;product=citrate synthase;protein_id=NP_629955.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6382853	6383920	.	+	.	ID=id7669;Dbxref=GeneID:1101274;Note=Pfam match to entry citrate_synt PF00285%2C Citrate sy nthase%2C score 314.55;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6383615	6383653	.	+	.	ID=id7670;Dbxref=GeneID:1101274;Note=PS00480 Citrate synthase signature;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6384115	6384351	.	-	.	ID=gene5896;Dbxref=GeneID:1101275;Name=SCO5833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO5833
NC_003888.3	RefSeq	CDS	6384115	6384351	.	-	0	ID=cds5779;Parent=gene5896;Dbxref=Genbank:NP_629956.1,GeneID:1101275;Name=NP_629956.1;Note=SC5B8.23c%2C unknown%2C len: 78 aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_629956.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6384343	6391017	.	-	.	ID=id7671;Note=overlap with Cosmid St5B8;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6384343	6384444	.	+	.	ID=id7672;Note=overlap with St9B10 from: 1 to: 102;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6384360	6384364	.	-	.	ID=id7673;Note=possible RBS upstream of SC5B8.23c;gbkey=RBS
NC_003888.3	RefSeq	gene	6384501	6385247	.	-	.	ID=gene5897;Dbxref=GeneID:1101276;Name=SC9B10.01c;gbkey=Gene;gene=SC9B10.01c;gene_biotype=protein_coding;gene_synonym=SC9B10.01c;locus_tag=SCO5834
NC_003888.3	RefSeq	CDS	6384501	6385247	.	-	0	ID=cds5780;Parent=gene5897;Dbxref=Genbank:NP_629957.1,GeneID:1101276;Name=NP_629957.1;Note=SC9B10.01c%2C membrane protein%2C len: 248 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9B10.01c;product=hypothetical protein;protein_id=NP_629957.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6385325	6385331	.	+	.	ID=id7674;Note=possible RBS upstream of SC9B10.02;gbkey=RBS
NC_003888.3	RefSeq	gene	6385339	6386427	.	+	.	ID=gene5898;Dbxref=GeneID:1101277;Name=SC9B10.02;gbkey=Gene;gene=SC9B10.02;gene_biotype=protein_coding;gene_synonym=SC9B10.02;locus_tag=SCO5835
NC_003888.3	RefSeq	CDS	6385339	6386427	.	+	0	ID=cds5781;Parent=gene5898;Dbxref=Genbank:NP_629958.1,GeneID:1101277;Name=NP_629958.1;Note=SC9B10.02%2C possible ATP/GTP binding protein%2C len: 362 aa%3B similar in N-terminus to other ATP/GTP binding proteins eg. COBW_PSEDE P29937 cobw protein from pseudomonas denitrificans (353 aa)%2C fasta scores%3B opt: 302 z-score: 390.2 E(): 1.4e-14%2C 30.1%25 identity in 366 aa overlap and to TR:Q9RRS7 (EMBL:AE002071) Deinococcus radiodurans CobW protein%2C %2C DR2408%2C 320 aa%3B fasta scores: opt: 434 Z-score: 475.8 E(): 7.2e-19%3B 34.412%25 identity in 340 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC9B10.02;product=ATP/GTP-binding protein;protein_id=NP_629958.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6385387	6385410	.	+	.	ID=id7675;Dbxref=GeneID:1101277;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9B10.02
NC_003888.3	RefSeq	gene	6386424	6388880	.	-	.	ID=gene5899;Dbxref=GeneID:1101278;Name=SC9B10.03c;gbkey=Gene;gene=SC9B10.03c;gene_biotype=protein_coding;gene_synonym=SC9B10.03c;locus_tag=SCO5836
NC_003888.3	RefSeq	CDS	6386424	6388880	.	-	0	ID=cds5782;Parent=gene5899;Dbxref=Genbank:NP_629959.1,GeneID:1101278;Name=NP_629959.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=SC9B10.03c;product=DNA topoisomerase IV subunit A;protein_id=NP_629959.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6387382	6388802	.	-	.	ID=id7676;Dbxref=GeneID:1101278;Note=69%25 match EM_BA:SCDNAGYR L27063 Streptomyces coelicolor dnaA-gyrA region from 5495 to 6921;gbkey=misc_feature;gene=SC9B10.03c
NC_003888.3	RefSeq	ribosome_entry_site	6388890	6388895	.	-	.	ID=id7677;Note=possible RBS upstream of SC9B10.03c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6389208	6389213	.	+	.	ID=id7678;Note=possible RBS upstream of SC9B10.04;gbkey=RBS
NC_003888.3	RefSeq	gene	6389216	6390568	.	+	.	ID=gene5900;Dbxref=GeneID:1101279;Name=SC9B10.04;gbkey=Gene;gene=SC9B10.04;gene_biotype=protein_coding;gene_synonym=SC9B10.04;locus_tag=SCO5837
NC_003888.3	RefSeq	CDS	6389216	6390568	.	+	0	ID=cds5783;Parent=gene5900;Dbxref=Genbank:NP_629960.1,GeneID:1101279;Name=NP_629960.1;Note=SC9B10.04%2C probable zinc protease%2C len: 450 aa%3B weakly similar to many of prokaryotic and eukaryotic origin eg. Y4WA_RHISN P55679 hypothetical zinc protease y4wa from Rhizobium sp. (512 aa)%2C fasta scores%3B opt: 617 z-score: 325.0 E(): 6.1e-11%2C 30.8%25 identity in 426 aa overlap%3B and MPP2_YEAST P10507 mitochondrial processing peptidase beta subunit (462 aa)%2C fasta scores%3B opt: 355 z-score: 321.6 E(): 9.4e-11%2C 25.3%25 identity in 415 aa overlap. The zinc-binding and active site residues are conserved;gbkey=CDS;gene=SC9B10.04;product=zinc protease;protein_id=NP_629960.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6390552	6390557	.	+	.	ID=id7679;Dbxref=GeneID:1101279;Note=possible RBS upstream of SC9B10.05;gbkey=RBS;gene=SC9B10.04
NC_003888.3	RefSeq	gene	6390565	6391953	.	+	.	ID=gene5901;Dbxref=GeneID:1101280;Name=SC9B10.05;gbkey=Gene;gene=SC9B10.05;gene_biotype=protein_coding;gene_synonym=SC9B10.05;locus_tag=SCO5838
NC_003888.3	RefSeq	CDS	6390565	6391953	.	+	0	ID=cds5784;Parent=gene5901;Dbxref=Genbank:NP_629961.1,GeneID:1101280;Name=NP_629961.1;Note=SC9B10.05%2C possible protease%2C len: 462%3B weakly similar to several hypothetical proteases eg. TR:P73669 (EMBL:D90908) processing protease from Synechocystis sp. (435 aa)%2C fasta scores%3B opt: 363 z-score: 293.0 E(): 3.7e-09%2C 26.0%25 identity in 439 aa overlap;gbkey=CDS;gene=SC9B10.05;product=protease;protein_id=NP_629961.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6392306	6392310	.	+	.	ID=id7680;Note=possible RBS upstream of SC9B10.06;gbkey=RBS
NC_003888.3	RefSeq	gene	6392322	6393074	.	+	.	ID=gene5902;Dbxref=GeneID:1101281;Name=SC9B10.06;gbkey=Gene;gene=SC9B10.06;gene_biotype=protein_coding;gene_synonym=SC9B10.06;locus_tag=SCO5839
NC_003888.3	RefSeq	CDS	6392322	6393074	.	+	0	ID=cds5785;Parent=gene5902;Dbxref=Genbank:NP_629962.1,GeneID:1101281;Name=NP_629962.1;Note=SC9B10.06%2C membrane protein%2C len: 250 aa%3B similar in part to several hypothetical proteins and to TR:P74894 (EMBL:U50357) bacteriocin-like inhibitory substance ZooA from Streptococcus zooepidemicus (285 aa)%2C fasta scores%3B opt: 278 z-score: 314.8 E(): 2.3e-10%2C 37.4%25 identity in 139 aa overlap%2C Contains probable coiled-coil region from aa 72 to 118. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9B10.06;product=hypothetical protein;protein_id=NP_629962.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6393184	6393189	.	+	.	ID=id7681;Note=possible RBS upstream of SC9B10.07;gbkey=RBS
NC_003888.3	RefSeq	gene	6393195	6393890	.	+	.	ID=gene5903;Dbxref=GeneID:1101282;Name=SC9B10.07;gbkey=Gene;gene=SC9B10.07;gene_biotype=protein_coding;gene_synonym=SC9B10.07;locus_tag=SCO5840
NC_003888.3	RefSeq	CDS	6393195	6393890	.	+	0	ID=cds5786;Parent=gene5903;Dbxref=Genbank:NP_629963.1,GeneID:1101282;Name=NP_629963.1;Note=SC9B10.07%2C probable transcriptional regulator%2C len: 231 aa%3B similar to many eg. GNTR_BACSU P10585 gluconate operon transcriptional repressor (243 aa)%2C fasta scores%3B opt: 199 z-score: 264.8 E(): 1.4e-07%2C 26.2%25 identity in 195 aa overlap. Contains PS00043 Bacterial regulatory proteins%2C gntR family signature. Contains probable helix-turn-helix motif at aa positions 29-49 (Score 1133%2C +3.05 SD);gbkey=CDS;gene=SC9B10.07;product=transcriptional regulator;protein_id=NP_629963.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6393279	6393344	.	+	.	ID=id7682;Dbxref=GeneID:1101282;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SC9B10.07
NC_003888.3	RefSeq	gene	6394045	6394326	.	-	.	ID=gene5904;Dbxref=GeneID:1101283;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;gene_synonym=ptsH;locus_tag=SCO5841
NC_003888.3	RefSeq	CDS	6394045	6394326	.	-	0	ID=cds5787;Parent=gene5904;Dbxref=Genbank:NP_629964.1,GeneID:1101283;Name=NP_629964.1;Note=SC9B10.08c%2C ptsH%2C phosphocarrier protein hpr%2C len: 93 aa%3B similar to many eg. PTHP_ECOLI P07006 phosphocarrier protein hpr (85 aa)%2C fasta scores%3B opt: 153 z-score: 226.5 E(): 1.9e-05%2C 31.0%25 identity in 84 aa overlap. Contains PS00369 PTS HPR component histidine phosphorylation site signature;gbkey=CDS;gene=ptsH;product=phosphocarrier protein HPr;protein_id=NP_629964.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6394267	6394290	.	-	.	ID=id7683;Dbxref=GeneID:1101283;Note=PS00369 PTS HPR component histidine phosphorylation site signature;gbkey=misc_feature;gene=ptsH
NC_003888.3	RefSeq	ribosome_entry_site	6394337	6394340	.	-	.	ID=id7684;Note=possible RBS upstream of PS00369 ptsH;gbkey=RBS
NC_003888.3	RefSeq	gene	6394529	6397648	.	+	.	ID=gene5905;Dbxref=GeneID:1101284;Name=SC9B10.09;gbkey=Gene;gene=SC9B10.09;gene_biotype=protein_coding;gene_synonym=SC9B10.09;locus_tag=SCO5842
NC_003888.3	RefSeq	CDS	6394529	6397648	.	+	0	ID=cds5788;Parent=gene5905;Dbxref=Genbank:NP_629965.1,GeneID:1101284;Name=NP_629965.1;Note=SC9B10.09%2C unknown%2C len: 1039%3B weak similarity to hypothetical proteins from M. jannaschii Y590_METJA Q58010 hypothetical protein mj0590 (704 aa)%2C fasta scores%3B opt: 377 z-score: 424.6 E(): 1.7e-16%2C 24.0%25 identity in 810 aa overlap%3B and E. coli YFIQ_ECOLI P76594 hypothetical 98.0 kd protein in ung-pssa intergenic region (886 aa)%2C fasta scores%3B opt: 267 z-score: 215.7 E(): 7.4e-05%2C 23.9%25 identity in 833 aa overlap. Contains 12 tandem repeats of the aa triplet SGP at aa positions 695 to 707%3B these are not present in Y590_METJA or YFIQ_ECOLI;gbkey=CDS;gene=SC9B10.09;product=hypothetical protein;protein_id=NP_629965.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6396611	6396727	.	+	.	ID=id7685;Dbxref=GeneID:1101284;Note=13 degenerate repeats of the 9 bp sequence TCCGGTCCG;gbkey=repeat_region;gene=SC9B10.09
NC_003888.3	RefSeq	ribosome_entry_site	6397742	6397745	.	+	.	ID=id7686;Note=possible RBS upstream of SC9B10.10;gbkey=RBS
NC_003888.3	RefSeq	gene	6397754	6398341	.	+	.	ID=gene5906;Dbxref=GeneID:1101285;Name=SC9B10.10;gbkey=Gene;gene=SC9B10.10;gene_biotype=protein_coding;gene_synonym=SC9B10.10;locus_tag=SCO5843
NC_003888.3	RefSeq	CDS	6397754	6398341	.	+	0	ID=cds5789;Parent=gene5906;Dbxref=Genbank:NP_629966.1,GeneID:1101285;Name=NP_629966.1;Note=SC9B10.10%2C unknown%2C len: 195 aa;gbkey=CDS;gene=SC9B10.10;product=hypothetical protein;protein_id=NP_629966.1;transl_table=11
NC_003888.3	RefSeq	gene	6398341	6399534	.	+	.	ID=gene5907;Dbxref=GeneID:1101286;Name=SC9B10.11;gbkey=Gene;gene=SC9B10.11;gene_biotype=protein_coding;gene_synonym=SC9B10.11;locus_tag=SCO5844
NC_003888.3	RefSeq	CDS	6398341	6399534	.	+	0	ID=cds5790;Parent=gene5907;Dbxref=Genbank:NP_629967.1,GeneID:1101286;Name=NP_629967.1;Note=SC9B10.11%2C unknown%2C len: 397 aa;gbkey=CDS;gene=SC9B10.11;product=hypothetical protein;protein_id=NP_629967.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6399566	6399569	.	+	.	ID=id7687;Note=possible RBS upstream of SC9B10.12;gbkey=RBS
NC_003888.3	RefSeq	gene	6399582	6400232	.	+	.	ID=gene5908;Dbxref=GeneID:1101287;Name=SC9B10.12;gbkey=Gene;gene=SC9B10.12;gene_biotype=protein_coding;gene_synonym=SC9B10.12;locus_tag=SCO5845
NC_003888.3	RefSeq	CDS	6399582	6400232	.	+	0	ID=cds5791;Parent=gene5908;Dbxref=Genbank:NP_629968.1,GeneID:1101287;Name=NP_629968.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;gene=SC9B10.12;product=thymidine kinase;protein_id=NP_629968.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6399606	6399629	.	+	.	ID=id7688;Dbxref=GeneID:1101287;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9B10.12
NC_003888.3	RefSeq	gene	6400262	6402331	.	-	.	ID=gene5909;Dbxref=GeneID:1101288;Name=SC9B10.13c;gbkey=Gene;gene=SC9B10.13c;gene_biotype=protein_coding;gene_synonym=SC9B10.13c;locus_tag=SCO5846
NC_003888.3	RefSeq	CDS	6400262	6402331	.	-	0	ID=cds5792;Parent=gene5909;Dbxref=Genbank:NP_629969.1,GeneID:1101288;Name=NP_629969.1;Note=SC9B10.13c%2C hypothetical protein%2C len: 689 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC9B10.13c;product=hypothetical protein;protein_id=NP_629969.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6402337	6402340	.	-	.	ID=id7689;Note=possible RBS upstream of SC9B10.13c;gbkey=RBS
NC_003888.3	RefSeq	gene	6402599	6403366	.	+	.	ID=gene5910;Dbxref=GeneID:1101289;Name=SC9B10.14;gbkey=Gene;gene=SC9B10.14;gene_biotype=protein_coding;gene_synonym=SC9B10.14;locus_tag=SCO5847
NC_003888.3	RefSeq	CDS	6402599	6403366	.	+	0	ID=cds5793;Parent=gene5910;Dbxref=Genbank:NP_629970.1,GeneID:1101289;Name=NP_629970.1;Note=SC9B10.14%2C probable transcriptional regulator%2C len: 255 aa%3B weakly similar to many eg. FARR_ECOLI P13669 fatty acyl responsive regulator (240 aa)%2C fasta scores%3B opt: 220 z-score: 345.1 E(): 4.7e-12%2C 28.0%25 identity in 236 aa overlap. Contains PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=CDS;gene=SC9B10.14;product=transcriptional regulator;protein_id=NP_629970.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6402713	6402778	.	+	.	ID=id7690;Dbxref=GeneID:1101289;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SC9B10.14
NC_003888.3	RefSeq	ribosome_entry_site	6403567	6403570	.	+	.	ID=id7691;Note=possible RBS upstream of agaZ;gbkey=RBS
NC_003888.3	RefSeq	gene	6403579	6404886	.	+	.	ID=gene5911;Dbxref=GeneID:1101290;Name=agaZ;gbkey=Gene;gene=agaZ;gene_biotype=protein_coding;gene_synonym=agaZ;locus_tag=SCO5848
NC_003888.3	RefSeq	CDS	6403579	6404886	.	+	0	ID=cds5794;Parent=gene5911;Dbxref=Genbank:NP_629971.1,GeneID:1101290;Name=NP_629971.1;Note=SC9B10.15%2C agaZ%2C possible tagatose 6-phosphate kinase%2C len: 435%3B highly similar to AGAZ_ECOLI P42903 tagatose 6-phosphate kinase (426 aa)%2C fasta scores%3B opt: 1637 z-score: 2100.1 E(): 0%2C 57.5%25 identity in 421 aa overlap;gbkey=CDS;gene=agaZ;product=tagatose 6-phosphate kinase;protein_id=NP_629971.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6404874	6404877	.	+	.	ID=id7692;Dbxref=GeneID:1101290;Note=possible RBS upstream of agaS;gbkey=RBS;gene=agaZ
NC_003888.3	RefSeq	gene	6404883	6406040	.	+	.	ID=gene5912;Dbxref=GeneID:1101291;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;gene_synonym=agaS,SC9B10.16;locus_tag=SCO5849
NC_003888.3	RefSeq	CDS	6404883	6406040	.	+	0	ID=cds5795;Parent=gene5912;Dbxref=Genbank:NP_629972.1,GeneID:1101291;Name=NP_629972.1;Note=SC9B10.16%2C agaS%2C len: 385 aa%3B similar to AGAS_ECOLI P42907 agas protein (384 aa) (possible tagatose-6-phosphate ketose/aldose isomerase)%2C fasta scores%3B opt: 960 z-score: 1350.4 E(): 0%2C 45.9%25 identity in 366 aa overlap;gbkey=CDS;gene=agaS;product=AgaS protein;protein_id=NP_629972.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6406078	6406083	.	+	.	ID=id7693;Note=possible RBS upstream of SC9B10.17;gbkey=RBS
NC_003888.3	RefSeq	gene	6406090	6407082	.	+	.	ID=gene5913;Dbxref=GeneID:1101292;Name=SC9B10.17;gbkey=Gene;gene=SC9B10.17;gene_biotype=protein_coding;gene_synonym=SC9B10.17;locus_tag=SCO5850
NC_003888.3	RefSeq	CDS	6406090	6407082	.	+	0	ID=cds5796;Parent=gene5913;Dbxref=Genbank:NP_629973.1,GeneID:1101292;Name=NP_629973.1;Note=SC9B10.17%2C unknown%2C len: 330 aa%3B similar to TR:Q97U07 (EMBL:AE006910) hypothetical protein from Sulfolobus solfataricus (298 aa) fasta scores%3B opt: 370%2C Z-score: 414.6%2C E(): 1.8e-15%2C 31.596%25 identity (34.520%25 ungapped) in 307 aa overlap.;gbkey=CDS;gene=SC9B10.17;product=hypothetical protein;protein_id=NP_629973.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6407069	6407072	.	+	.	ID=id7694;Dbxref=GeneID:1101292;Note=possible RBS upstream of SC9B10.18;gbkey=RBS;gene=SC9B10.17
NC_003888.3	RefSeq	gene	6407079	6408017	.	+	.	ID=gene5914;Dbxref=GeneID:1101293;Name=SC9B10.18;gbkey=Gene;gene=SC9B10.18;gene_biotype=protein_coding;gene_synonym=SC9B10.18;locus_tag=SCO5851
NC_003888.3	RefSeq	CDS	6407079	6408017	.	+	0	ID=cds5797;Parent=gene5914;Dbxref=Genbank:NP_629974.1,GeneID:1101293;Name=NP_629974.1;Note=SC9B10.18%2C possible integral membrane protein%2C len: 312 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9B10.18;product=hypothetical protein;protein_id=NP_629974.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6408107	6408110	.	+	.	ID=id7695;Note=possible RBS upstream of agaY;gbkey=RBS
NC_003888.3	RefSeq	gene	6408122	6408970	.	+	.	ID=gene5915;Dbxref=GeneID:1101294;Name=agaY;gbkey=Gene;gene=agaY;gene_biotype=protein_coding;gene_synonym=agaY;locus_tag=SCO5852
NC_003888.3	RefSeq	CDS	6408122	6408970	.	+	0	ID=cds5798;Parent=gene5915;Dbxref=Genbank:NP_629975.1,GeneID:1101294;Name=NP_629975.1;Note=SC9B10.19%2C agaY%2C possible tagatose-bisphosphate aldolase%2C len: 282 aa%3B similar to eg. AGAY_ECOLI P42908 tagatose-bisphosphate aldolase agaY (286 aa)%2C fasta scores%3B opt: 585 z-score: 725.0 E(): 3.2e-33%2C 37.6%25 identity in 279 aa overlap;gbkey=CDS;gene=agaY;product=tagatose-bisphosphate aldolase;protein_id=NP_629975.1;transl_table=11
NC_003888.3	RefSeq	gene	6409025	6409828	.	-	.	ID=gene5916;Dbxref=GeneID:1101295;Name=SC9B10.20c;gbkey=Gene;gene=SC9B10.20c;gene_biotype=protein_coding;gene_synonym=SC9B10.20c;locus_tag=SCO5853
NC_003888.3	RefSeq	CDS	6409025	6409828	.	-	0	ID=cds5799;Parent=gene5916;Dbxref=Genbank:NP_629976.1,GeneID:1101295;Name=NP_629976.1;Note=SC9B10.20c%2C unknown%2C len: 267 aa%3B similar to several hypothetical proteins eg.TR:Q55078 (EMBL:U50973) OrfA from Streptomyces sp. (275 aa)%2C fasta scores%3B opt: 418 z-score: 665.7 E(): 6.4e-30%2C 37.1%25 identity in 267 aa overlap;gbkey=CDS;gene=SC9B10.20c;product=hypothetical protein;protein_id=NP_629976.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6409835	6409838	.	-	.	ID=id7696;Note=possible RBS upstream of SC9B10.20c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6410053	6410056	.	+	.	ID=id7697;Note=possible RBS upstream of SC9B10.21;gbkey=RBS
NC_003888.3	RefSeq	gene	6410064	6410915	.	+	.	ID=gene5917;Dbxref=GeneID:1101296;Name=SC9B10.21;gbkey=Gene;gene=SC9B10.21;gene_biotype=protein_coding;gene_synonym=SC9B10.21;locus_tag=SCO5854
NC_003888.3	RefSeq	CDS	6410064	6410915	.	+	0	ID=cds5800;Parent=gene5917;Dbxref=Genbank:NP_629977.1,GeneID:1101296;Name=NP_629977.1;Note=SC9B10.21%2C possible thiosulfate sulfurtransferase%2C len: 283 aa%3B similar to many eukaryotic and prokaryotic rhodaneses eg. THTR_HUMAN P25325 thiosulfate sulfurtransferase (EC 2.8.1.1) (296 aa)%2C fasta scores%3B opt: 403 z-score: 389.9 E(): 1.5e-14%2C 35.0%25 identity in 286 aa overlap;gbkey=CDS;gene=SC9B10.21;product=thiosulfate sulfurtransferase;protein_id=NP_629977.1;transl_table=11
NC_003888.3	RefSeq	gene	6411199	6412257	.	-	.	ID=gene5918;Dbxref=GeneID:1101297;Name=SC9B10.22c;gbkey=Gene;gene=SC9B10.22c;gene_biotype=protein_coding;gene_synonym=SC9B10.22c;locus_tag=SCO5855
NC_003888.3	RefSeq	CDS	6411199	6412257	.	-	0	ID=cds5801;Parent=gene5918;Dbxref=Genbank:NP_629978.1,GeneID:1101297;Name=NP_629978.1;Note=SC9B10.22c%2C unknown%2C len: 352 aa%3B similar to hypothetical proteins from Mycobacteruim tuberculosis and M. leprae%3B YZ11_MYCTU Q10545 MTCY31.11c (253 aa)%2C fasta scores%3B opt: 444 z-score: 396.4 E(): 6.4e-15%2C 35.0%25 identity in 246 aa overlap. Contains probable helix-turn-helix domain at aa positions 70-91 (Score 1098%2C +2.93 SD);gbkey=CDS;gene=SC9B10.22c;product=DNA-binding protein;protein_id=NP_629978.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6412262	6412267	.	-	.	ID=id7698;Note=possible RBS upstream of SC9B10.22c;gbkey=RBS
NC_003888.3	RefSeq	gene	6412730	6413614	.	+	.	ID=gene5919;Dbxref=GeneID:1101298;Name=SC9B10.23;gbkey=Gene;gene=SC9B10.23;gene_biotype=protein_coding;gene_synonym=SC9B10.23;locus_tag=SCO5856
NC_003888.3	RefSeq	CDS	6412730	6413614	.	+	0	ID=cds5802;Parent=gene5919;Dbxref=Genbank:NP_629979.1,GeneID:1101298;Name=NP_629979.1;Note=SC9B10.23%2C unknown ATP/GTP binding protein ( membrane protein)%2C len: 294 aa%3B contains PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9B10.23;product=hypothetical protein;protein_id=NP_629979.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6413228	6413251	.	+	.	ID=id7699;Dbxref=GeneID:1101298;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9B10.23
NC_003888.3	RefSeq	gene	6413538	6414875	.	-	.	ID=gene5920;Dbxref=GeneID:1101299;Name=SC9B10.24c;gbkey=Gene;gene=SC9B10.24c;gene_biotype=protein_coding;gene_synonym=SC9B10.24c;locus_tag=SCO5857
NC_003888.3	RefSeq	CDS	6413538	6414875	.	-	0	ID=cds5803;Parent=gene5920;Dbxref=Genbank:NP_629980.1,GeneID:1101299;Name=NP_629980.1;Note=SC9B10.24c%2C probable FAD-dependent oxidoreductase%2C len: 445 aa%3B similar to several eg. GGLO_RAT P10867 l-gulonolactone oxidase (ec 1.1.3.8) (439 aa)%2C fasta scores%3B opt: 854 z-score: 973.6 E(): 0%2C 33.6%25 identity in 440 aa overlap. Contains PS00862 Oxygen oxidoreductases covalent FAD-binding site%2C and possible transmembrane anchor at approx. 170-200 aa;gbkey=CDS;gene=SC9B10.24c;product=FAD-dependent oxidoreductase;protein_id=NP_629980.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6414690	6414791	.	-	.	ID=id7700;Dbxref=GeneID:1101299;Note=PS00862 Oxygen oxidoreductases covalent FAD-binding site;gbkey=misc_feature;gene=SC9B10.24c
NC_003888.3	RefSeq	gene	6414817	6415998	.	-	.	ID=gene5921;Dbxref=GeneID:1101300;Name=SC9B10.25c;gbkey=Gene;gene=SC9B10.25c;gene_biotype=protein_coding;gene_synonym=SC9B10.25c;locus_tag=SCO5858
NC_003888.3	RefSeq	CDS	6414817	6415998	.	-	0	ID=cds5804;Parent=gene5921;Dbxref=Genbank:NP_629981.1,GeneID:1101300;Name=NP_629981.1;Note=SC9B10.25c%2C unknown%2C probable integral membrane protein%2C len: 393 aa%3B similar to TR:Q9I1K4 (EMBL:AE004652) Pseudomonas aeruginosa hypothetical protein PA2269%2C 401 aa%3B fasta scores: opt: 1176 Z-score: 1266.8 E(): 6.3e-63%3B 50.678%25 identity in 369 aa overlap;gbkey=CDS;gene=SC9B10.25c;product=hypothetical protein;protein_id=NP_629981.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6414881	6414885	.	-	.	ID=id7701;Dbxref=GeneID:1101300;Note=possible RBS upstream of SC9B10.24c;gbkey=RBS;gene=SC9B10.25c
NC_003888.3	RefSeq	ribosome_entry_site	6416225	6416228	.	+	.	ID=id7702;Note=possible RBS upstream of hemH;gbkey=RBS
NC_003888.3	RefSeq	gene	6416236	6417363	.	+	.	ID=gene5922;Dbxref=GeneID:1101301;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;gene_synonym=SC9B10.26;locus_tag=SCO5859
NC_003888.3	RefSeq	CDS	6416236	6417363	.	+	0	ID=cds5805;Parent=gene5922;Dbxref=Genbank:NP_629982.1,GeneID:1101301;Name=NP_629982.1;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;gbkey=CDS;gene=hemH;product=ferrochelatase;protein_id=NP_629982.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6417363	6417367	.	+	.	ID=id7703;Note=possible RBS upstream of SC9B10.27;gbkey=RBS
NC_003888.3	RefSeq	gene	6417372	6418190	.	+	.	ID=gene5923;Dbxref=GeneID:1101302;Name=SC9B10.27;gbkey=Gene;gene=SC9B10.27;gene_biotype=protein_coding;gene_synonym=SC9B10.27,suhB;locus_tag=SCO5860
NC_003888.3	RefSeq	CDS	6417372	6418190	.	+	0	ID=cds5806;Parent=gene5923;Dbxref=Genbank:NP_733676.1,GeneID:1101302;Name=NP_733676.1;Note=SC2E9.01%2C suhB%2C probable extragenic suppressor protein%2C partial CDS%2C len: >209 aa%2C similar to eg. SUHB_ECOLI P22783 extragenic suppressor protein Suhb (267 aa)%2C fasta scores%3B opt: 448 z-score: 565.9 E(): 2.5e-24%2C 41.0%25 identity in 212 aa overlap%2C and to eg. MYO2_LYCES P54927 myo-inositol-1(or 4)-monophosphatase (265 aa)%2C fasta scores%3B opt: 359 z-score: 450.8 E(): 6.6e-18%2C 38.7%25 identity in 199 aa overlap. Contains PS00629 and PS00630 Inositol monophosphatase family signatures 1 and 2 and Pfam match to entry inositol_P PF00459%2C Inositol monophosphatase family%2C score 64.03. Overlaps and extends ORF from neighbouring cosmid SC9B10.27~SC9B10.27%2C suhB gene homolog%2C partial CDS%2C len > 96 aa%3B similar to E.coli SUHB_ECOLI P22783 extragenic suppressor protein Suhb (267 aa)%2C fasta scores%3B opt: 186 z-score: 333.9 E(): 1.9e-11%2C 40.0%25 identity in 85 aa overlap%3B and to MYOP_HUMAN P29218 myo-inositol-1(or 4)-monophosphatase (277 aa)%2C fasta scores%3B opt: 180 z-score: 267.3 E(): 9.9e-08%2C 37.2%25 identity in 94 aa overlap;gbkey=CDS;gene=SC9B10.27;product=SuhB protein;protein_id=NP_733676.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6417636	6417677	.	+	.	ID=id7704;Dbxref=GeneID:1101302;Note=PS00629 Inositol monophosphatase family signature 1;gbkey=misc_feature;gene=SC9B10.27
NC_003888.3	RefSeq	sequence_feature	6417657	6417854	.	+	.	ID=id7705;Dbxref=GeneID:1101302;Note=Pfam match to entry inositol_P PF00459%2C Inositol monophosphatase family%2C score 64.03;gbkey=misc_feature;gene=SC9B10.27
NC_003888.3	RefSeq	sequence_feature	6418038	6418082	.	+	.	ID=id7706;Dbxref=GeneID:1101302;Note=PS00630 Inositol monophosphatase family signature 2;gbkey=misc_feature;gene=SC9B10.27
NC_003888.3	RefSeq	ribosome_entry_site	6418505	6418508	.	+	.	ID=id7707;Note=possible RBS upstream of SC2E9.02;gbkey=RBS
NC_003888.3	RefSeq	gene	6418515	6419081	.	+	.	ID=gene5924;Dbxref=GeneID:1101303;Name=SC2E9.02;gbkey=Gene;gene=SC2E9.02;gene_biotype=protein_coding;gene_synonym=SC2E9.02;locus_tag=SCO5861
NC_003888.3	RefSeq	CDS	6418515	6419081	.	+	0	ID=cds5807;Parent=gene5924;Dbxref=Genbank:NP_629983.1,GeneID:1101303;Name=NP_629983.1;Note=SC2E9.02%2C unknown%2C len: 188 aa%3B not predicted by FramePlot;gbkey=CDS;gene=SC2E9.02;product=hypothetical protein;protein_id=NP_629983.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6418650	6418699	.	+	.	ID=id7708;Dbxref=GeneID:1101303;Note=hairpin loop with 20/21 bp stem;gbkey=stem_loop;gene=SC2E9.02
NC_003888.3	RefSeq	sequence_feature	6418851	6421665	.	+	.	ID=id7709;Note=99.9%25 match to EMBL:SLCUTRS X58793 S.lividans cutR gene and cutS gene from: 1 to: 2815;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6419295	6419299	.	+	.	ID=id7710;Note=possible RBS upstream of cutR;gbkey=RBS
NC_003888.3	RefSeq	gene	6419308	6419961	.	+	.	ID=gene5925;Dbxref=GeneID:1101304;Name=cutR;gbkey=Gene;gene=cutR;gene_biotype=protein_coding;gene_synonym=cutR,SC2E9.03;locus_tag=SCO5862
NC_003888.3	RefSeq	CDS	6419308	6419961	.	+	0	ID=cds5808;Parent=gene5925;Dbxref=Genbank:NP_629984.1,GeneID:1101304;Name=NP_629984.1;Note=SC2E9.03%2C cutR%2C two-component regulator CutR%2C len: 217 aa%3B identical to CUTR_STRLI Q03756 transcriptional regulatory protein CutR from Streptomyces lividans (217 aa). Contains Pfam match to entry trans_reg_C PF00486%2C Transcriptional regulatory proteins%2C C terminal%2C score 74.36;gbkey=CDS;gene=cutR;product=two-component regulator CutR;protein_id=NP_629984.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6419503	6419709	.	+	.	ID=id7711;Dbxref=GeneID:1101304;Note=Pfam match to entry trans_reg_C PF00486%2C Transcriptional regulatory proteins%2C C terminal%2C score 74.36;gbkey=misc_feature;gene=cutR
NC_003888.3	RefSeq	gene	6419968	6421212	.	+	.	ID=gene5926;Dbxref=GeneID:1101305;Name=cutS;gbkey=Gene;gene=cutS;gene_biotype=protein_coding;gene_synonym=cutS,SC2E9.04;locus_tag=SCO5863
NC_003888.3	RefSeq	CDS	6419968	6421212	.	+	0	ID=cds5809;Parent=gene5926;Dbxref=Genbank:NP_629985.1,GeneID:1101305;Name=NP_629985.1;Note=SC2E9.04%2C cutS%2C two-component sensor (kinase)%2C len: 414 aa%3B identical to SW:CUTS_STRLI (EMBL:Q03757) CutS protein from Streptomyces lividans (414 aa). Contains Pfam match to entry signal PF00512%2C Signal C terminal domain%2C score 191.45. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=cutS;product=two-component sensor (kinase);protein_id=NP_629985.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6420340	6420966	.	+	.	ID=id7712;Dbxref=GeneID:1101305;Note=Pfam match to entry signal PF00512%2C Signal C termial domain%2C score 191.45;gbkey=misc_feature;gene=cutS
NC_003888.3	RefSeq	ribosome_entry_site	6421607	6421610	.	+	.	ID=id7713;Note=possible RBS upstream of SC2E9.05;gbkey=RBS
NC_003888.3	RefSeq	gene	6421618	6421914	.	+	.	ID=gene5927;Dbxref=GeneID:1101306;Name=SC2E9.05;gbkey=Gene;gene=SC2E9.05;gene_biotype=protein_coding;gene_synonym=SC2E9.05;locus_tag=SCO5864
NC_003888.3	RefSeq	CDS	6421618	6421914	.	+	0	ID=cds5810;Parent=gene5927;Dbxref=Genbank:NP_629986.1,GeneID:1101306;Name=NP_629986.1;Note=SC2E9.05%2C unknown%2C len: 98 aa%3B highly similar to hypothetical proteins from Mycobacterium tuberculosis and M. leprae eg. TR:O07201 (EMBL:Z96072) MTCY05A6.20C (100 aa)%2C fasta scores%3B opt: 465 z-score: 814.5 E(): 0%2C 71.4%25 identity in 98 aa overlap;gbkey=CDS;gene=SC2E9.05;product=hypothetical protein;protein_id=NP_629986.1;transl_table=11
NC_003888.3	RefSeq	gene	6421928	6422881	.	+	.	ID=gene5928;Dbxref=GeneID:1101307;Name=SC2E9.06;gbkey=Gene;gene=SC2E9.06;gene_biotype=protein_coding;gene_synonym=SC2E9.06;locus_tag=SCO5865
NC_003888.3	RefSeq	CDS	6421928	6422881	.	+	0	ID=cds5811;Parent=gene5928;Dbxref=Genbank:NP_629987.1,GeneID:1101307;Name=NP_629987.1;Note=SC2E9.06%2C unknown%2C len: 317 aa;gbkey=CDS;gene=SC2E9.06;product=hypothetical protein;protein_id=NP_629987.1;transl_table=11
NC_003888.3	RefSeq	gene	6422895	6423359	.	-	.	ID=gene5929;Dbxref=GeneID:1101308;Name=SC2E9.07c;gbkey=Gene;gene=SC2E9.07c;gene_biotype=protein_coding;gene_synonym=SC2E9.07c;locus_tag=SCO5866
NC_003888.3	RefSeq	CDS	6422895	6423359	.	-	0	ID=cds5812;Parent=gene5929;Dbxref=Genbank:NP_629988.1,GeneID:1101308;Name=NP_629988.1;Note=SC2E9.07c%2C membrane protein%2C len: 154 aa%3B similar to hypothetical proteins from Mycobacterium tuberculosis and M. leprae e.g. TR:O07200 (EMBL:Z96072) MTCY05A6.19 (161 aa)%2C fasta scores%3B opt: 230 z-score: 264.3 E(): 1.6e-07%2C 35.7%25 identity in 154 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC2E9.07c;product=hypothetical protein;protein_id=NP_629988.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6423405	6423408	.	+	.	ID=id7714;Note=possible RBS upstream of SC2E9.08;gbkey=RBS
NC_003888.3	RefSeq	gene	6423417	6424001	.	+	.	ID=gene5930;Dbxref=GeneID:1101309;Name=SC2E9.08;gbkey=Gene;gene=SC2E9.08;gene_biotype=protein_coding;gene_synonym=SC2E9.08;locus_tag=SCO5867
NC_003888.3	RefSeq	CDS	6423417	6424001	.	+	0	ID=cds5813;Parent=gene5930;Dbxref=Genbank:NP_629989.1,GeneID:1101309;Name=NP_629989.1;Note=SC2E9.08%2C unknown%2C len: 194 aa;gbkey=CDS;gene=SC2E9.08;product=hypothetical protein;protein_id=NP_629989.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6423987	6423991	.	+	.	ID=id7715;Dbxref=GeneID:1101309;Note=possible RBS upstream of dut;gbkey=RBS;gene=SC2E9.08
NC_003888.3	RefSeq	gene	6423998	6424549	.	+	.	ID=gene5931;Dbxref=GeneID:1101310;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;gene_synonym=SC2E9.09;locus_tag=SCO5868
NC_003888.3	RefSeq	CDS	6423998	6424549	.	+	0	ID=cds5814;Parent=gene5931;Dbxref=Genbank:NP_629990.1,GeneID:1101310;Name=NP_629990.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;gene=dut;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=NP_629990.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6424539	6424543	.	+	.	ID=id7716;Dbxref=GeneID:1101310;Note=possible RBS upstream of SC2E9.10;gbkey=RBS;gene=dut
NC_003888.3	RefSeq	gene	6424551	6425303	.	+	.	ID=gene5932;Dbxref=GeneID:1101311;Name=SC2E9.10;gbkey=Gene;gene=SC2E9.10;gene_biotype=protein_coding;gene_synonym=SC2E9.10;locus_tag=SCO5869
NC_003888.3	RefSeq	CDS	6424551	6425303	.	+	0	ID=cds5815;Parent=gene5932;Dbxref=Genbank:NP_629991.1,GeneID:1101311;Name=NP_629991.1;Note=SC2E9.10%2C unknown%2C len: 250 aa%3B similar to hypothetical proteins from Mycobacterium tuberculosis and M. leprae eg. TR:O07198 (EMBL:Z96072) MTCY05A6.17C (259 aa)%2C fasta scores%3B opt: 213 z-score: 435.8 E(): 4.5e-17%2C 28.2%25 identity in 255 aa overlap. Contains possible coiled-coil domain from aa 1-40;gbkey=CDS;gene=SC2E9.10;product=hypothetical protein;protein_id=NP_629991.1;transl_table=11
NC_003888.3	RefSeq	gene	6425493	6426185	.	+	.	ID=gene5933;Dbxref=GeneID:1101312;Name=SC2E9.11;gbkey=Gene;gene=SC2E9.11;gene_biotype=protein_coding;gene_synonym=SC2E9.11;locus_tag=SCO5870
NC_003888.3	RefSeq	CDS	6425493	6426185	.	+	0	ID=cds5816;Parent=gene5933;Dbxref=Genbank:NP_629992.1,GeneID:1101312;Name=NP_629992.1;Note=SC2E9.11%2C probable ABC-transporter ATP binding protein%2C len: 230 aa%3B highly similar to many eg. Y796_METJA Q58206 hypothetical abc transporter atp-binding protein (235 aa)%2C fasta scores%3B opt: 666 z-score: 870.6 E(): 0%2C 43.8%25 identity in 226 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop)%2C PS00211 ABC transporters family signature and Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C score 54.33;gbkey=CDS;gene=SC2E9.11;product=ABC transporter ATP-binding protein;protein_id=NP_629992.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6425499	6425927	.	+	.	ID=id7717;Dbxref=GeneID:1101312;Note=Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C score 54.33;gbkey=misc_feature;gene=SC2E9.11
NC_003888.3	RefSeq	sequence_feature	6425628	6425651	.	+	.	ID=id7718;Dbxref=GeneID:1101312;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2E9.11
NC_003888.3	RefSeq	sequence_feature	6425940	6425984	.	+	.	ID=id7719;Dbxref=GeneID:1101312;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC2E9.11
NC_003888.3	RefSeq	ribosome_entry_site	6426313	6426316	.	+	.	ID=id7720;Note=possible RBS upstream of SC2E9.12;gbkey=RBS
NC_003888.3	RefSeq	gene	6426319	6428865	.	+	.	ID=gene5934;Dbxref=GeneID:1101313;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;gene_synonym=kdpD,SC2E9.12;locus_tag=SCO5871
NC_003888.3	RefSeq	CDS	6426319	6428865	.	+	0	ID=cds5817;Parent=gene5934;Dbxref=Genbank:NP_629993.1,GeneID:1101313;Name=NP_629993.1;Note=SC2E9.12%2C kdpD%2C two-component sensor/protein kinase%2C len: 848 aa%3B similar to Escherichia coli turgor pressure sensor KDPD_ECOLI P21865 sensor protein kdpD (ec 2.7.3.-) (894 aa)%2C fasta scores%3B opt: 997 z-score: 1347.4 E(): 0%2C 34.8%25 identity in 877 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry signal PF00512%2C Signal C terminal domain%2C score 184.57. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=kdpD;product=turgor pressure sensor;protein_id=NP_629993.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6426352	6426375	.	+	.	ID=id7721;Dbxref=GeneID:1101313;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=kdpD
NC_003888.3	RefSeq	sequence_feature	6427945	6428562	.	+	.	ID=id7722;Dbxref=GeneID:1101313;Note=Pfam match to entry signal PF00512%2C Signal C terminal domain%2C score 184.57;gbkey=misc_feature;gene=kdpD
NC_003888.3	RefSeq	gene	6428862	6429545	.	+	.	ID=gene5935;Dbxref=GeneID:1101314;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;gene_synonym=kdpE,SC2E9.13;locus_tag=SCO5872
NC_003888.3	RefSeq	CDS	6428862	6429545	.	+	0	ID=cds5818;Parent=gene5935;Dbxref=Genbank:NP_629994.1,GeneID:1101314;Name=NP_629994.1;Note=SC2E9.13%2C kdpE%2C two-component trascriptional regulator%2C len: 227%2C similar to E.coli turgor pressure regulator KDPE_ECOLI P21866 kdp operon transcriptional regulatory protein (225 aa)%2C fasta scores%3B opt: 752 z-score: 1090.9 E(): 0%2C 51.1%25 identity in 225 aa overlap. Contains Pfam match to entry trans_reg_C PF00486%2C Transcriptional regulatory proteins%2C C terminal%2C score 96.22;gbkey=CDS;gene=kdpE;product=turgor pressure regulator;protein_id=NP_629994.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6429069	6429287	.	+	.	ID=id7723;Dbxref=GeneID:1101314;Note=Pfam match to entry trans_reg_C PF00486%2C Transcriptional regulatory proteins%2C C terminal%2C score 96.22;gbkey=misc_feature;gene=kdpE
NC_003888.3	RefSeq	gene	6429542	6430006	.	+	.	ID=gene5936;Dbxref=GeneID:1101315;Name=SC2E9.14;gbkey=Gene;gene=SC2E9.14;gene_biotype=protein_coding;gene_synonym=SC2E9.14;locus_tag=SCO5873
NC_003888.3	RefSeq	CDS	6429542	6430006	.	+	0	ID=cds5819;Parent=gene5936;Dbxref=Genbank:NP_629995.1,GeneID:1101315;Name=NP_629995.1;Note=SC2E9.14%2C unknown%2C len: 154 aa%3B similar to Mycobacterium tuberculosis hypothetical protein TR:O07196 (EMBL:Z96072) MTCY05A6.15C (122 aa)%2C fasta scores%3B opt: 299 z-score: 502.1 E(): 9.1e-21%2C 41.0%25 identity in 117 aa overlap;gbkey=CDS;gene=SC2E9.14;product=hypothetical protein;protein_id=NP_629995.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6430000	6430003	.	+	.	ID=id7724;Dbxref=GeneID:1101315;Note=possible RBS upstream of SC2E9.15;gbkey=RBS;gene=SC2E9.14
NC_003888.3	RefSeq	gene	6430010	6430828	.	+	.	ID=gene5937;Dbxref=GeneID:1101316;Name=SC2E9.15;gbkey=Gene;gene=SC2E9.15;gene_biotype=protein_coding;gene_synonym=SC2E9.15;locus_tag=SCO5874
NC_003888.3	RefSeq	CDS	6430010	6430828	.	+	0	ID=cds5820;Parent=gene5937;Dbxref=Genbank:NP_629996.1,GeneID:1101316;Name=NP_629996.1;Note=SC2E9.15%2C membrane protein%2C len: 272 aa%3B similar to Mycobacterium tuberculosis hypothetical protein TR:O07195 (EMBL:Z96072) MTCY05A6.14C (223 aa)%2C fasta scores%3B opt: 212 z-score: 285.5 E(): 1.1e-08%2C 23.5%25 identity in 247 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC2E9.15;product=hypothetical protein;protein_id=NP_629996.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6430834	6430903	.	+	.	ID=id7725;Note=hairpin loop with 31/33 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6430947	6431627	.	-	.	ID=gene5938;Dbxref=GeneID:1101317;Name=SC2E9.16c;gbkey=Gene;gene=SC2E9.16c;gene_biotype=protein_coding;gene_synonym=SC2E9.16c;locus_tag=SCO5875
NC_003888.3	RefSeq	CDS	6430947	6431627	.	-	0	ID=cds5821;Parent=gene5938;Dbxref=Genbank:NP_629997.1,GeneID:1101317;Name=NP_629997.1;Note=SC2E9.16c%2C possible potassium uptake protein%3B len: 226 aa%3B similar to many homologs of trkA eg. Mycobacterium tuberculosis TR:O07194 (EMBL:Z96072) MTCY05A6.13 (220 aa)%2C fasta scores%3B opt: 870 z-score: 1486.1 E(): 0%2C 58.8%25 identity in 216 aa overlap. Also similar to upstream ORF SC2E9.17c%2C trkA%2C (E(): 1.8e-05%2C 22.6%25 identity in 212 aa overlap);gbkey=CDS;gene=SC2E9.16c;product=potassium uptake protein;protein_id=NP_629997.1;transl_table=11
NC_003888.3	RefSeq	gene	6431627	6432298	.	-	.	ID=gene5939;Dbxref=GeneID:1101318;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=trkA;locus_tag=SCO5876
NC_003888.3	RefSeq	CDS	6431627	6432298	.	-	0	ID=cds5822;Parent=gene5939;Dbxref=Genbank:NP_629998.1,GeneID:1101318;Name=NP_629998.1;Note=SC2E9.17c%2C trkA%2C potassium uptake protein%2C len: 223 aa%3B similar to first domain of TRKA_ECOLI P23868 Trk system potassium uptake protein (458 aa)%2C fasta scores%3B opt: 249 z-score: 389.9 E(): 1.6e-14%2C 28.6%25 identity in 227 aa overlap. Also similar to downstream ORF SC2E9.16c (E(): 0.00062%2C 22.6%25 identity in 212 aa overlap);gbkey=CDS;gene=trkA;product=potassium uptake protein;protein_id=NP_629998.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6431638	6431643	.	-	.	ID=id7726;Dbxref=GeneID:1101318;Note=possible RBS upstream of SC2E9.16c;gbkey=RBS;gene=trkA
NC_003888.3	RefSeq	sequence_feature	6431750	6433947	.	-	.	ID=id7727;Note=99.9%25 match to EMBL:SCREDD M29790 S.coelicolor redD gene%2C complete cds from: 1 to: 2198;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6432312	6432317	.	-	.	ID=id7728;Note=possible RBS upstream of trkA;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	6432338	6432837	.	+	.	ID=id7729;Note=identical to EMBL:SCREDDP X68944 S.coelicolor redD promoter region from: 241 to: 768;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6432566	6433618	.	+	.	ID=gene5940;Dbxref=GeneID:1101319;Name=redD;gbkey=Gene;gene=redD;gene_biotype=protein_coding;gene_synonym=redD;locus_tag=SCO5877
NC_003888.3	RefSeq	CDS	6432566	6433618	.	+	0	ID=cds5823;Parent=gene5940;Dbxref=Genbank:NP_629999.1,GeneID:1101319;Name=NP_629999.1;Note=SC2E9.18%2C redD%2C transcriptional regulator%2C len: 350 aa%3B identical to REDD_STRCO P16922 redd protein from Streptomyces coelicolor (350 aa). Possible alternative start site at 15238 (aa 84);gbkey=CDS;gene=redD;product=transcriptional regulator RedD;protein_id=NP_629999.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6433656	6433659	.	+	.	ID=id7730;Note=possible RBS upstream of redX;gbkey=RBS
NC_003888.3	RefSeq	gene	6433668	6436616	.	+	.	ID=gene5941;Dbxref=GeneID:1101320;Name=redX;gbkey=Gene;gene=redX;gene_biotype=protein_coding;gene_synonym=redX;locus_tag=SCO5878
NC_003888.3	RefSeq	CDS	6433668	6436616	.	+	0	ID=cds5824;Parent=gene5941;Dbxref=Genbank:NP_630000.1,GeneID:1101320;Name=NP_630000.1;Note=SC2E9.19%2C redX%2C polyketide synthase with two beta-ketoacyl synthase domains%2C len: 982 aa%3B similar to many eg. ERY3_SACER Q03133 erythronolide synthase%2C modules 5 and 6 (3170 aa)%2C fasta scores%3B opt: 649 z-score: 586.3 E(): 1.9e-25%2C 29.2%25 identity in 1029 aa overlap. Contains 2 x Pfam match to entry ketoacyl-synt PF00109%2C Beta-ketoacyl synthases%2C scores 52.40 and 310.80;gbkey=CDS;gene=redX;product=polyketide synthase RedX;protein_id=NP_630000.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6433683	6434849	.	+	.	ID=id7731;Dbxref=GeneID:1101320;Note=Pfam match to entry ketoacyl-synt PF00109%2C Beta-ketoacyl synthases%2C score 52.40;gbkey=misc_feature;gene=redX
NC_003888.3	RefSeq	sequence_feature	6434988	6436364	.	+	.	ID=id7732;Dbxref=GeneID:1101320;Note=Pfam match to entry ketoacyl-synt PF00109%2C Beta-ketoacyl synthases%2C score 310.80;gbkey=misc_feature;gene=redX
NC_003888.3	RefSeq	gene	6436613	6437788	.	+	.	ID=gene5942;Dbxref=GeneID:1101321;Name=redW;gbkey=Gene;gene=redW;gene_biotype=protein_coding;gene_synonym=redW;locus_tag=SCO5879
NC_003888.3	RefSeq	CDS	6436613	6437788	.	+	0	ID=cds5825;Parent=gene5942;Dbxref=Genbank:NP_630001.1,GeneID:1101321;Name=NP_630001.1;Note=SC2E9.20%2C redW%2C acyl-coa dehydrogenase%2C len: 391%3B similar to many eg. ACDB_BACSU P45857 acyl-coa dehydrogenase (ec 1.3.99.-) (379 aa)%2C fasta scores%3B opt: 831 z-score: 1005.0 E(): 0%2C 40.7%25 identity in 371 aa overlap. Contains Pfam match to entry Acyl-CoA_dh PF00441%2C Acyl-CoA dehydrogenases%2C score 308.86;gbkey=CDS;gene=redW;product=acyl-coa dehydrogenase RedW;protein_id=NP_630001.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6436613	6437506	.	+	.	ID=id7733;Dbxref=GeneID:1101321;Note=Pfam match to entry Acyl-CoA_dh PF00441%2C Acyl-CoA dehydrogenases%2C score 308.86;gbkey=misc_feature;gene=redW
NC_003888.3	RefSeq	ribosome_entry_site	6437801	6437804	.	+	.	ID=id7734;Note=possible RBS upstream of redY;gbkey=RBS
NC_003888.3	RefSeq	gene	6437814	6438134	.	+	.	ID=gene5943;Dbxref=GeneID:1101322;Name=redY;gbkey=Gene;gene=redY;gene_biotype=protein_coding;gene_synonym=redY;locus_tag=SCO5880
NC_003888.3	RefSeq	CDS	6437814	6438134	.	+	0	ID=cds5826;Parent=gene5943;Dbxref=Genbank:NP_630002.1,GeneID:1101322;Name=NP_630002.1;Note=SC2E9.21%2C redY%2C unknown function%2C len: 106;gbkey=CDS;gene=redY;product=RedY protein;protein_id=NP_630002.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6438009	6438409	.	-	.	ID=id7735;Note=identical to EMBL:SCREDZ Y07902 S.coelicolor redZ gene from: 660 to: 1060;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6438206	6438859	.	-	.	ID=gene5944;Dbxref=GeneID:1101323;Name=redZ;gbkey=Gene;gene=redZ;gene_biotype=protein_coding;gene_synonym=redZ;locus_tag=SCO5881
NC_003888.3	RefSeq	CDS	6438206	6438859	.	-	0	ID=cds5827;Parent=gene5944;Dbxref=Genbank:NP_733677.1,GeneID:1101323;Name=NP_733677.1;Note=SC2E9.22c%2C redZ%2C response regulator%2C partial CDS%2C len: >67 aa%3B identical to TR:P72402 (EMBL:Y07902) RedZ gene (217 aa). Contains probable helix-turn-helix motif at aa 12 to 33 (Score 1209%2C +3.30 SD)~SC3F7.01c%2C redZ%2C response regulator%2C partial CDS%2C len >184 aa%3B identical to TR:P72402 (EMBL:Y07902) redZ gene (217 aa)%2C and similar to many two-component regulators e.g. UVRY_ECOLI P07027 UvrY protein from Escherichia coli (218 aa)%2C fasta scores%3B opt: 159 z-score: 291.2 E(): 5e-09%2C 26.3%25 identity in 186 aa overlap. Contains TTA leucine codon%3B a potential target for action of bldA%2C probable Helix-turn-helix motif at aa 162-183 (Score 1209%2C +3.30 SD) and Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 31.36;gbkey=CDS;gene=redZ;product=response regulator;protein_id=NP_733677.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6438308	6439068	.	-	.	ID=id7736;Note=100%25 match to EM_BA:SCREDZ Y07902 S.coelicolor redZ gene from: 1 to: 761;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6438308	6438409	.	+	.	ID=id7737;Note=overlap with cosmid St3F7 from: 1 to: 102;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6438392	6438394	.	-	.	ID=id7738;Dbxref=GeneID:1101323;Note=TTA leucine codon%3B potential target for action of bldA;gbkey=misc_feature;gene=redZ
NC_003888.3	RefSeq	sequence_feature	6438527	6438850	.	-	.	ID=id7739;Dbxref=GeneID:1101323;Note=Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C from 1 to 115%2C score 31.36;gbkey=misc_feature;gene=redZ
NC_003888.3	RefSeq	gene	6439123	6440310	.	-	.	ID=gene5945;Dbxref=GeneID:1101324;Name=redV;gbkey=Gene;gene=redV;gene_biotype=protein_coding;gene_synonym=redV,SC3F7.02c;locus_tag=SCO5882
NC_003888.3	RefSeq	CDS	6439123	6440310	.	-	0	ID=cds5828;Parent=gene5945;Dbxref=Genbank:NP_630003.1,GeneID:1101324;Name=NP_630003.1;Note=SC3F7.02c%2C redV%2C function unknown%2C len: 395 aa;gbkey=CDS;gene=redV;product=RedV protein;protein_id=NP_630003.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6440317	6440321	.	-	.	ID=id7740;Note=possible RBS upstream of SC3F7.02c;gbkey=RBS
NC_003888.3	RefSeq	gene	6440423	6441208	.	-	.	ID=gene5946;Dbxref=GeneID:1101325;Name=redU;gbkey=Gene;gene=redU;gene_biotype=protein_coding;gene_synonym=redU,SC3F7.03c;locus_tag=SCO5883
NC_003888.3	RefSeq	CDS	6440423	6441208	.	-	0	ID=cds5829;Parent=gene5946;Dbxref=Genbank:NP_630004.1,GeneID:1101325;Name=NP_630004.1;Note=SC3F7.03c%2C redU%2C unknown%2C len: 261 aa;gbkey=CDS;gene=redU;product=hypothetical protein;protein_id=NP_630004.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6441211	6441216	.	-	.	ID=id7741;Note=possible RBS upstream of SC3F7.03c;gbkey=RBS
NC_003888.3	RefSeq	gene	6441276	6442166	.	-	.	ID=gene5947;Dbxref=GeneID:1101326;Name=SC3F7.04c;gbkey=Gene;gene=SC3F7.04c;gene_biotype=protein_coding;gene_synonym=SC3F7.04c;locus_tag=SCO5884
NC_003888.3	RefSeq	CDS	6441276	6442166	.	-	0	ID=cds5830;Parent=gene5947;Dbxref=Genbank:NP_630005.1,GeneID:1101326;Name=NP_630005.1;Note=SC3F7.04c%2C unknown%2C len: 296 aa%3B some similarity to Archaeoglobus fulgidus hypothetical protein TR:G2648734 (EMBL:AE000977) AF1816 (300 aa)%2C fasta scores%3B opt: 314 z-score: 322.6 E(): 8.9e-11%2C 30.2%25 identity in 301 aa overlap;gbkey=CDS;gene=SC3F7.04c;product=hypothetical protein;protein_id=NP_630005.1;transl_table=11
NC_003888.3	RefSeq	gene	6442174	6442614	.	-	.	ID=gene5948;Dbxref=GeneID:1101327;Name=SC3F7.05c;gbkey=Gene;gene=SC3F7.05c;gene_biotype=protein_coding;gene_synonym=SC3F7.05c;locus_tag=SCO5885
NC_003888.3	RefSeq	CDS	6442174	6442614	.	-	0	ID=cds5831;Parent=gene5948;Dbxref=Genbank:NP_630006.1,GeneID:1101327;Name=NP_630006.1;Note=SC3F7.05c%2C membrane protein%2C len: 146 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3F7.05c;product=hypothetical protein;protein_id=NP_630006.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6442181	6442184	.	-	.	ID=id7742;Dbxref=GeneID:1101327;Note=possible RBS upstream of SC3F7.04c;gbkey=RBS;gene=SC3F7.05c
NC_003888.3	RefSeq	ribosome_entry_site	6442625	6442629	.	-	.	ID=id7743;Note=possible RBS upstream of SC3F7.05c;gbkey=RBS
NC_003888.3	RefSeq	gene	6442753	6443976	.	-	.	ID=gene5949;Dbxref=GeneID:1101328;Name=redR;gbkey=Gene;gene=redR;gene_biotype=protein_coding;gene_synonym=redR,SC3F7.06c;locus_tag=SCO5886
NC_003888.3	RefSeq	CDS	6442753	6443976	.	-	0	ID=cds5832;Parent=gene5949;Dbxref=Genbank:NP_630007.1,GeneID:1101328;Name=NP_630007.1;Note=SC3F7.06c%2C redR%2C probable 3-oxoacyl-[acyl-carrier-protein] synthase II%2C len: 407 aa%3B similar to many eg. FABF_ECOLI P39435 3-oxoacyl-[acyl-carrier-protein] synthase II (EC 2.3.1.41) (beta-ketoacyl-acp synthase II) (412 aa)%2C fasta scores%3B opt: 1054 z-score: 1061.9 E(): 0%2C 42.0%25 identity in 412 aa overlap. Also some similarity to SC3F7.12 from aa 800 to 1210 (E(): 3.3e-10%2C 32.2%25 identity in 432 aa overlap). Contains Pfam match to entry ketoacyl-synt PF00109%2C Beta-ketoacyl synthases%2C score 243.99;gbkey=CDS;gene=redR;product=3-oxoacyl-ACP synthase;protein_id=NP_630007.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6442759	6443961	.	-	.	ID=id7744;Dbxref=GeneID:1101328;Note=Pfam match to entry ketoacyl-synt PF00109%2C Beta-ketoacyl synthases%2C from 1 to 442%2C score 243.99;gbkey=misc_feature;gene=redR
NC_003888.3	RefSeq	gene	6443973	6444218	.	-	.	ID=gene5950;Dbxref=GeneID:1101329;Name=redQ;gbkey=Gene;gene=redQ;gene_biotype=protein_coding;gene_synonym=redQ,SC3F7.07c;locus_tag=SCO5887
NC_003888.3	RefSeq	CDS	6443973	6444218	.	-	0	ID=cds5833;Parent=gene5950;Dbxref=Genbank:NP_630008.1,GeneID:1101329;Name=NP_630008.1;Note=SC3F7.07c%2C redQ%2C probable acyl carrier protein%2C len%3B 81 aa%3B similar to several eg. ACP_SYNY3 P20804 acyl carrier protein (acp) from Synechocystis (77 aa)%2Cfasta scores%3B opt: 153 z-score: 256.6 E(): 4.2e-07%2C 34.7%25 identity in 72 aa overlap;gbkey=CDS;gene=redQ;product=acyl carrier protein;protein_id=NP_630008.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6444228	6444234	.	-	.	ID=id7745;Note=possible RBS upstream of SC3F7.07c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6444576	6444581	.	+	.	ID=id7746;Note=possible RBS upstream of SC3F7.08;gbkey=RBS
NC_003888.3	RefSeq	gene	6444587	6445594	.	+	.	ID=gene5951;Dbxref=GeneID:1101330;Name=redP;gbkey=Gene;gene=redP;gene_biotype=protein_coding;gene_synonym=redP,SC3F7.08;locus_tag=SCO5888
NC_003888.3	RefSeq	CDS	6444587	6445594	.	+	0	ID=cds5834;Parent=gene5951;Dbxref=Genbank:NP_630009.1,GeneID:1101330;Name=NP_630009.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;gene=redP;product=3-oxoacyl-ACP synthase III;protein_id=NP_630009.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6445644	6445648	.	+	.	ID=id7747;Note=possible RBS upstream of SC3F7.09;gbkey=RBS
NC_003888.3	RefSeq	gene	6445654	6445917	.	+	.	ID=gene5952;Dbxref=GeneID:1101331;Name=redO;gbkey=Gene;gene=redO;gene_biotype=protein_coding;gene_synonym=redO,SC3F7.09;locus_tag=SCO5889
NC_003888.3	RefSeq	CDS	6445654	6445917	.	+	0	ID=cds5835;Parent=gene5952;Dbxref=Genbank:NP_630010.1,GeneID:1101331;Name=NP_630010.1;Note=SC3F7.09%2C redO%2C unknown%2C len: 87 aa;gbkey=CDS;gene=redO;product=hypothetical protein;protein_id=NP_630010.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6445898	6445903	.	+	.	ID=id7748;Dbxref=GeneID:1101331;Note=possible RBS upstream of SC3F7.10;gbkey=RBS;gene=redO
NC_003888.3	RefSeq	gene	6445914	6447836	.	+	.	ID=gene5953;Dbxref=GeneID:1101332;Name=redN;gbkey=Gene;gene=redN;gene_biotype=protein_coding;gene_synonym=redN,SC3F7.10;locus_tag=SCO5890
NC_003888.3	RefSeq	CDS	6445914	6447836	.	+	0	ID=cds5836;Parent=gene5953;Dbxref=Genbank:NP_630011.1,GeneID:1101332;Name=NP_630011.1;Note=SC3F7.10%2C redN%2C 8-amino-7-oxononanoate synthase%2C len: 640 aa%3B similar to many diverse transferases eg. BIOF_BACSH P22806 8-amino-7-oxononanoate synthase (389 aa)%2C fasta scores%3B opt: 926 z-score: 888.4 E(): 0%2C 42.1%25 identity in 361 aa overlap. Also simlar to SC3F7.12 from aa 1700 to end (E(): 3.6e-15%2C 31.9%25 identity in 630 aa overlap). Contains Pfam match to entry aminotran_2 PF00222%2C Aminotransferases class-II%2C score 292.92 in C-terminus;gbkey=CDS;gene=redN;product=8-amino-7-oxononanoate synthase;protein_id=NP_630011.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6446883	6447734	.	+	.	ID=id7749;Dbxref=GeneID:1101332;Note=Pfam match to entry aminotran_2 PF00222%2C Aminotransferases class-II%2C from 1 to 292%2C score 292.92;gbkey=misc_feature;gene=redN
NC_003888.3	RefSeq	ribosome_entry_site	6447929	6447934	.	+	.	ID=id7750;Note=possible RBS upstream of St3F7.11;gbkey=RBS
NC_003888.3	RefSeq	gene	6447950	6449548	.	+	.	ID=gene5954;Dbxref=GeneID:1101333;Name=redM;gbkey=Gene;gene=redM;gene_biotype=protein_coding;gene_synonym=redM,St3F7.11;locus_tag=SCO5891
NC_003888.3	RefSeq	CDS	6447950	6449548	.	+	0	ID=cds5837;Parent=gene5954;Dbxref=Genbank:NP_630012.1,GeneID:1101333;Name=NP_630012.1;Note=St3F7.11%2C redM%2C probable peptide synthase%2C len: 532 aa%3B similar to part of many peptide synthases eg. Myxococcus xanthus TR:Q50858 (EMBL:U24657) saframycin MX1 synthetase A (2605 aa)%2C fasta scores%3B opt: 572 z-score: 782.6 E(): 0%2C 36.1%25 identity in 548 aa overlap. Contains PS00455  AMP-binding domain signature and Pfam match to entry AMP-binding PF00501%2C AMP-binding enzymes%2C score 392.99. Also similar to part of SC3F7.12 aa 60 to 590 (E(): 2.8e-05%2C 25.3%25 identity in 561 aa overlap);gbkey=CDS;gene=redM;product=peptide synthase;protein_id=NP_630012.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6448043	6449302	.	+	.	ID=id7751;Dbxref=GeneID:1101333;Note=Pfam match to entry AMP-binding PF00501%2C AMP-binding enzymes%2C from 1 to 415%2C score 392.99;gbkey=misc_feature;gene=redM
NC_003888.3	RefSeq	sequence_feature	6448463	6448498	.	+	.	ID=id7752;Dbxref=GeneID:1101333;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=redM
NC_003888.3	RefSeq	gene	6449549	6456442	.	+	.	ID=gene5955;Dbxref=GeneID:1101334;Name=redL;gbkey=Gene;gene=redL;gene_biotype=protein_coding;gene_synonym=redL,SC3F7.12;locus_tag=SCO5892
NC_003888.3	RefSeq	CDS	6449549	6456442	.	+	0	ID=cds5838;Parent=gene5955;Dbxref=Genbank:NP_630013.1,GeneID:1101334;Name=NP_630013.1;Note=SC3F7.12%2C redL%2C probable polyketide synthase%2C len: 2297 aa%3B contains 3 modules: N-terminus (start to approx. aa 700) similar to eg. N-terminus of TR:Q50857 (EMBL:U24657) saframycin mx1 synthetase B from Myxococcus xanthus (1770 aa) (fasta scores%3B E(): 0%2C 45.0%25 identity in 691 aa overlap)%2C contains Pfam match to AMP-binding PF00501%2C AMP-binding enzymes%2C score 166.66%3B central module (approx aa 795 to 1800) similar to eg. TR:G2317861 (EMBL:U78289) Streptomyces fradiae tylactone synthase module 3 (1864 aa) (E(): 0%2C 39.9%25 identity in 1125 aa overlap)%2C contains PS00606 Beta-ketoacyl synthases active site and Pfam match to ketoacyl-synt PF00109%2C Beta-ketoacyl synthases%2C score 585.24%3B and C-terminus (approx aa 1800 to end)%2C similar to eg. TR:Q52936 (EMBL:X64131 acyl-transferase rkpG from Rhizobium meliloti (446 aa) (E(): 0. 44.9%25 identity in 394 aa overlap)%2C contains PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site and Pfam match to aminotran_2 PF00222%2C Aminotransferases class-II%2C score 276.93;gbkey=CDS;gene=redL;product=polyketide synthase;protein_id=NP_630013.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6449729	6451084	.	+	.	ID=id7753;Dbxref=GeneID:1101334;Note=Pfam match to entry AMP-binding PF00501%2C AMP-binding enzymes%2C from 1 to 415%2C score 166.66;gbkey=misc_feature;gene=redL
NC_003888.3	RefSeq	sequence_feature	6451946	6453175	.	+	.	ID=id7754;Dbxref=GeneID:1101334;Note=Pfam match to entry ketoacyl-synt PF00109%2C Beta-ketoacyl synthases%2C from 1 to 442%2C score 585.24;gbkey=misc_feature;gene=redL
NC_003888.3	RefSeq	sequence_feature	6452384	6452434	.	+	.	ID=id7755;Dbxref=GeneID:1101334;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=redL
NC_003888.3	RefSeq	sequence_feature	6455525	6456379	.	+	.	ID=id7756;Dbxref=GeneID:1101334;Note=Pfam match to entry aminotran_2 PF00222%2C Aminotransferases class-II%2C from 1 to 292%2C score 276.93;gbkey=misc_feature;gene=redL
NC_003888.3	RefSeq	sequence_feature	6455996	6456025	.	+	.	ID=id7757;Dbxref=GeneID:1101334;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=redL
NC_003888.3	RefSeq	gene	6456446	6457489	.	+	.	ID=gene5956;Dbxref=GeneID:1101335;Name=redK;gbkey=Gene;gene=redK;gene_biotype=protein_coding;gene_synonym=redK,SC3F7.13;locus_tag=SCO5893
NC_003888.3	RefSeq	CDS	6456446	6457489	.	+	0	ID=cds5839;Parent=gene5956;Dbxref=Genbank:NP_630014.1,GeneID:1101335;Name=NP_630014.1;Note=SC3F7.13%2C redK%2C probable oxidoreductase%2C len: 347 aa%3B similar to many eukaryotic steroid dehydrogenases eg. TR:Q62878 (EMBL:L17138) 3 hydroxysteroid dehydrogenase from Rattus norvegicus (373 aa)%2C fasta scores%3B opt: 103 z-score: 378.9 E(): 6.6e-14%2C 30.4%25 identity in 355 aa overlap%3B and to Mycobacterium tuberculosis dehydrogenase TR:O06373 (EMBL:Z95436) MTCY15C10.18 (314 aa)%2C fasta scores%3B opt: 204 z-score: 417.9 E(): 4.4e-16%2C 27.7%25 identity in 339 aa overlap;gbkey=CDS;gene=redK;product=oxidoreductase;protein_id=NP_630014.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6457464	6457468	.	+	.	ID=id7758;Dbxref=GeneID:1101335;Note=possible RBS upstream of SC3F7.14;gbkey=RBS;gene=redK
NC_003888.3	RefSeq	gene	6457476	6458318	.	+	.	ID=gene5957;Dbxref=GeneID:1101336;Name=redJ;gbkey=Gene;gene=redJ;gene_biotype=protein_coding;gene_synonym=redJ,SC3F7.14;locus_tag=SCO5894
NC_003888.3	RefSeq	CDS	6457476	6458318	.	+	0	ID=cds5840;Parent=gene5957;Dbxref=Genbank:NP_630015.1,GeneID:1101336;Name=NP_630015.1;Note=SC3F7.14%2C redJ%2C probable thioesterase%2C len: 280 aa%3B similar to many e.g. TR:Q00442 (EMBL:X60379) erythomycin A biosynthesis thioesterase (EC 3.1.-.-.) from Saccharopolyspora erythraea (Streptomyces erythraeus) (247 aa)%2C fasta scores%3B opt: 451 z-score: 472.9 E(): 3.8e-19%2C 38.0%25 identity in 237 aa overlap;gbkey=CDS;gene=redJ;product=thioesterase;protein_id=NP_630015.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6458295	6458299	.	+	.	ID=id7759;Dbxref=GeneID:1101336;Note=possible RBS upstream of SC3F7.15;gbkey=RBS;gene=redJ
NC_003888.3	RefSeq	gene	6458306	6459394	.	+	.	ID=gene5958;Dbxref=GeneID:1101337;Name=redI;gbkey=Gene;gene=redI;gene_biotype=protein_coding;gene_synonym=redI,SC3F7.15;locus_tag=SCO5895
NC_003888.3	RefSeq	CDS	6458306	6459394	.	+	0	ID=cds5841;Parent=gene5958;Dbxref=Genbank:NP_630016.1,GeneID:1101337;Name=NP_630016.1;Note=SC3F7.15%2C redI%2C possible methyltransferase%2C len: 362 aa%3B weakly similar to several e.g. Streptomyces griseus TR:P72450 (EMBL:X95596) methyltransferase (242 aa)%2C fasta scores%3B opt: 130 z-score: 204.9 E(): 0.00032%2C 27.6%25 identity in 192 aa overlap;gbkey=CDS;gene=redI;product=methyltransferase;protein_id=NP_630016.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6459401	6459405	.	+	.	ID=id7760;Note=possible RBS upstream of SC3F7.16;gbkey=RBS
NC_003888.3	RefSeq	gene	6459417	6462218	.	+	.	ID=gene5959;Dbxref=GeneID:1101338;Name=redH;gbkey=Gene;gene=redH;gene_biotype=protein_coding;gene_synonym=redH,SC10A5.01,SC3F7.16;locus_tag=SCO5896
NC_003888.3	RefSeq	CDS	6459417	6462218	.	+	0	ID=cds5842;Parent=gene5959;Dbxref=Genbank:NP_733678.1,GeneID:1101338;Name=NP_733678.1;Note=SC10A5.01%2C redH%2C probable phosphoenolpyruvate-utilizing enzyme%2C partial CDS%2C len: >95 aa%3B overlaps and extends ORF from neighbouring cosmid SC3F7.16%3B similar to many eg. PPSA_STAMA P46893 probable phosphoenolpyruvate synthase (834 aa)%2C fasta scores%3B opt: 215 z-score: 351.4 E(): 2.3e-12%2C 47.8%25 identity in 69 aa overlap~SC3F7.16%2C probable phosphoenolpyruvate-utilizing enzyme%2C partial CDS%2C len: >872 aa%3B similar to many eg. PPSA_STAMA P46893 probable phosphoenolpyruvate synthase from Staphylothermus marinus (834 aa)%2C fasta scores%3B opt: 392 z-score: 614.9 E(): 4.7e-27%2C 33.0%25 identity in 309 aa overlap. Contains Pfam match to entry PEP-utilizers PF00391%2C PEP-utilizing enzymes%2C score 23.96;gbkey=CDS;gene=redH;product=phosphoenolpyruvate-utilizing enzyme;protein_id=NP_733678.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6461930	6462037	.	+	.	ID=id7761;Dbxref=GeneID:1101338;Note=overlap with St3F7 from: 23623 to: 23730;gbkey=misc_feature;gene=redH
NC_003888.3	RefSeq	sequence_feature	6461930	6462037	.	-	.	ID=id7762;Note=overlap with Cosmid St10A5;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6461931	6462032	.	+	.	ID=id7763;Dbxref=GeneID:1101338;Note=Pfam match to entry PEP-utilizers PF00391%2C PEP-utilizing enzymes%2C from 1 to 36%2C score 23.96;gbkey=misc_feature;gene=redH
NC_003888.3	RefSeq	ribosome_entry_site	6462284	6462287	.	+	.	ID=id7764;Note=possible RBS upstream of SC10A5.02;gbkey=RBS
NC_003888.3	RefSeq	gene	6462296	6463483	.	+	.	ID=gene5960;Dbxref=GeneID:1101339;Name=redG;gbkey=Gene;gene=redG;gene_biotype=protein_coding;gene_synonym=redG,SC10A5.02;locus_tag=SCO5897
NC_003888.3	RefSeq	CDS	6462296	6463483	.	+	0	ID=cds5843;Parent=gene5960;Dbxref=Genbank:NP_630017.1,GeneID:1101339;Name=NP_630017.1;Note=SC10A5.02%2C redG%2C probable oxidase%2C len: 395 aa%3B similar in N- terminus to many diverse oxidases e.g. TR:P95483 (EMBL:U7449 3) aminopyrrolnitrin oxidase PrnD from Pseudomonas fluorescens (363 aa)%2C fasta scores%3B opt: 349 z-score: 372.1 E(): 1. 6e-13%2C 33.3%25 identity in 165 aa overlap;gbkey=CDS;gene=redG;product=oxidase;protein_id=NP_630017.1;transl_table=11
NC_003888.3	RefSeq	gene	6463526	6464206	.	+	.	ID=gene5961;Dbxref=GeneID:1101340;Name=redF;gbkey=Gene;gene=redF;gene_biotype=protein_coding;gene_synonym=redF,SC10A5.03;locus_tag=SCO5898
NC_003888.3	RefSeq	CDS	6463526	6464206	.	+	0	ID=cds5844;Parent=gene5961;Dbxref=Genbank:NP_630018.1,GeneID:1101340;Name=NP_630018.1;Note=SC10A5.03%2C redF%2C probable membrane protein%2C len: 226 aa. Contains possibe hydrophobic membrane spanning regions;gbkey=CDS;gene=redF;product=hypothetical protein;protein_id=NP_630018.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6464362	6464365	.	+	.	ID=id7765;Note=possible RBS upstream of SC10A5.04;gbkey=RBS
NC_003888.3	RefSeq	gene	6464371	6465258	.	+	.	ID=gene5962;Dbxref=GeneID:1101341;Name=SC10A5.04;gbkey=Gene;gene=SC10A5.04;gene_biotype=protein_coding;gene_synonym=SC10A5.04;locus_tag=SCO5899
NC_003888.3	RefSeq	CDS	6464371	6465258	.	+	0	ID=cds5845;Parent=gene5962;Dbxref=Genbank:NP_630019.1,GeneID:1101341;Name=NP_630019.1;Note=SC10A5.04%2C unknown%2C len: 295 aa%3B similar to hypothetical proteins from Mycobacterioum tuberculosis and M. leprae e.g. YV29_MYCTU Q11167 hypothetical 39.3 kd protein CY20G9.29 (358 aa)%2C fasta scores%3B opt: 1075 z-score: 1514.7 E(): 0%2C 57.8%25 identity in 263 aa overlap;gbkey=CDS;gene=SC10A5.04;product=hypothetical protein;protein_id=NP_630019.1;transl_table=11
NC_003888.3	RefSeq	gene	6465627	6467702	.	+	.	ID=gene5963;Dbxref=GeneID:1101342;Name=SC10A5.05;gbkey=Gene;gene=SC10A5.05;gene_biotype=protein_coding;gene_synonym=SC10A5.05;locus_tag=SCO5900
NC_003888.3	RefSeq	CDS	6465627	6467702	.	+	0	ID=cds5846;Parent=gene5963;Dbxref=Genbank:NP_630020.1,GeneID:1101342;Name=NP_630020.1;Note=SC10A5.05%2C probable membrane protein%2C len: 691%3B high ly similar to M. tuberculosis membrane protein TR: O07192 (EMBL:Z96072) MTCY05A6.11C (647 aa)%2C fasta scores%3B o pt: 1980 z-score: 3557.6 E(): 0%2C 62.7%25 identity in 659 aa o verlap and weakly similar to many transport proteins eg. PR OY_SALTY P37460 proline-specific permease proy from Salmone lla typhimurium (456 aa)%2C fasta scores%3B opt: 169 z-score: 1 82.8 E(): 0.0055%2C 24.2%25 identity in 355 aa overlap;gbkey=CDS;gene=SC10A5.05;product=hypothetical protein;protein_id=NP_630020.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6467741	6467744	.	+	.	ID=id7766;Note=possible RBS upstream of SC10A5.06;gbkey=RBS
NC_003888.3	RefSeq	gene	6467755	6469131	.	+	.	ID=gene5964;Dbxref=GeneID:1101343;Name=SC10A5.06;gbkey=Gene;gene=SC10A5.06;gene_biotype=protein_coding;gene_synonym=SC10A5.06;locus_tag=SCO5901
NC_003888.3	RefSeq	CDS	6467755	6469131	.	+	0	ID=cds5847;Parent=gene5964;Dbxref=Genbank:NP_630021.1,GeneID:1101343;Name=NP_630021.1;Note=SC10A5.06%2C unknown%2C len: 458%3B similar to M. tuberculosis hypothetical protein TR:O07191 (EMBL:Z96072) MTCY05A6. 10C (405 aa)%2C fasta scores%3B opt: 455 z-score: 878.5 E(): 0%2C 38.4%25 identity in 417 aa overlap%2C and weakly similar to several RNA methyltransferases eg. YGCA_ECOLI P5513 5 hypothetical RNA methyltransferase (433 aa)%2C fasta scores %3B opt: 358 z-score: 331.2 E(): 3e-11%2C 27.4%25 identity in 441 aa overlap;gbkey=CDS;gene=SC10A5.06;product=RNA methyltransferase;protein_id=NP_630021.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6469662	6469716	.	+	.	ID=id7767;Note=hairpin loop with 21 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6469741	6469851	.	+	.	ID=gene5965;Dbxref=GeneID:1101344;Name=SC10A5.07;gbkey=Gene;gene=SC10A5.07;gene_biotype=pseudogene;gene_synonym=SC10A5.07;locus_tag=SCO5902;pseudo=true
NC_003888.3	RefSeq	sequence_feature	6469741	6469851	.	+	.	ID=id7768;Dbxref=PSEUDO:CAD55239.1,GeneID:1101344;Note=SC10A5.07%2C probable transposase pseudogene fragment%2C len: 36 aa%3B highly similar to part of many insertion eleme nt transposases eg. Q50761 (EMBL:X65618) TRANSPOSASE (308 a a)%2C fasta scores%3B opt: 125 z-score: 284.8 E(): 1.2e-08%2C 46. 9%25 identity in 32 aa overlap;gbkey=misc_feature;gene=SC10A5.07
NC_003888.3	RefSeq	ribosome_entry_site	6469832	6469838	.	+	.	ID=id7769;Dbxref=GeneID:1101344;Note=possible RBS upstream of SC10A5.08;gbkey=RBS;gene=SC10A5.07
NC_003888.3	RefSeq	gene	6469848	6470225	.	+	.	ID=gene5966;Dbxref=GeneID:1101345;Name=SC10A5.08;gbkey=Gene;gene=SC10A5.08;gene_biotype=pseudogene;gene_synonym=SC10A5.08;locus_tag=SCO5903;pseudo=true
NC_003888.3	RefSeq	sequence_feature	6469848	6470225	.	+	.	ID=id7770;Dbxref=PSEUDO:CAD55240.1,GeneID:1101345;Note=SC10A5.08%2C questionable ORF%2C possible pseudogene fragment%2C len: 125%3B contains segment of strong similarity to part of S. coelicolor regulator TR:Q53894 (EMBL:U51332) AbsA2 (222 aa)%2C fasta scores%3B opt: 110 z-score: 210.7 E(): 0.00 016%2C 47.1%25 identity in 70 aa overlap;gbkey=misc_feature;gene=SC10A5.08
NC_003888.3	RefSeq	gene	6470494	6470874	.	-	.	ID=gene5967;Dbxref=GeneID:1101346;Name=SC10A5.09c;gbkey=Gene;gene=SC10A5.09c;gene_biotype=protein_coding;gene_synonym=SC10A5.09c;locus_tag=SCO5904
NC_003888.3	RefSeq	CDS	6470494	6470874	.	-	0	ID=cds5848;Parent=gene5967;Dbxref=Genbank:NP_630022.1,GeneID:1101346;Name=NP_630022.1;Note=SC10A5.09c%2C unknown%2C len: 126 aa%3B similar to Mycobac terium tuberculosis hypothetical protein TR:O06156 (EMBL:Z9 5555) MTCY06F7.02C (105 aa)%2C fasta scores%3B opt: 125 z-score : 213.5 E(): 0.00011%2C 37.7%25 identity in 69 aa overlap;gbkey=CDS;gene=SC10A5.09c;product=hypothetical protein;protein_id=NP_630022.1;transl_table=11
NC_003888.3	RefSeq	gene	6470909	6473452	.	-	.	ID=gene5968;Dbxref=GeneID:1101347;Name=SC10A5.10c;gbkey=Gene;gene=SC10A5.10c;gene_biotype=protein_coding;gene_synonym=SC10A5.10c;locus_tag=SCO5905
NC_003888.3	RefSeq	CDS	6470909	6473452	.	-	0	ID=cds5849;Parent=gene5968;Dbxref=Genbank:NP_630023.1,GeneID:1101347;Name=NP_630023.1;Note=SC10A5.10c%2C probable export protein%2C len: 847 aa%3B similar to eg. S. coelicolor actinorhodin antibiotic export protein TR:Q53902 (EMBL:M64683) ORF2 (ACTII) (711 aa)%2C fasta scores%3B opt: 705 z-score: 1126.2 E(): 0%2C 35.4%25 identity in 746 aa overlap;gbkey=CDS;gene=SC10A5.10c;product=export protein;protein_id=NP_630023.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6473599	6473602	.	+	.	ID=id7771;Note=possible RBS upstream of SC10A5.11;gbkey=RBS
NC_003888.3	RefSeq	gene	6473606	6474202	.	+	.	ID=gene5969;Dbxref=GeneID:1101348;Name=SC10A5.11;gbkey=Gene;gene=SC10A5.11;gene_biotype=protein_coding;gene_synonym=SC10A5.11;locus_tag=SCO5906
NC_003888.3	RefSeq	CDS	6473606	6474202	.	+	0	ID=cds5850;Parent=gene5969;Dbxref=Genbank:NP_630024.1,GeneID:1101348;Name=NP_630024.1;Note=SC10A5.11%2C probable transcriptional regulator%2C len: 198 aa%3B similar to many members of the tetR family eg. TR:P72569 (EMBL:U58281) TetR homologue WhiR from Streptomyces roseosporus (179 aa)%2C fasta scores%3B opt: 367 z-score: 569.5 E(): 1.6e-24%2C 38.3%25 identity in 175 aa overlap. Contains pr obable helix-turn-helix motif at aa 37 to 58 (Score 1635%2C +4.76SD);gbkey=CDS;gene=SC10A5.11;product=transcriptional regulator;protein_id=NP_630024.1;transl_table=11
NC_003888.3	RefSeq	gene	6474317	6474436	.	-	.	ID=gene5970;Dbxref=GeneID:1101349;Name=SC10A5.12c;gbkey=Gene;gene=SC10A5.12c;gene_biotype=protein_coding;gene_synonym=SC10A5.12c;locus_tag=SCO5907
NC_003888.3	RefSeq	CDS	6474317	6474436	.	-	0	ID=cds5851;Parent=gene5970;Dbxref=Genbank:NP_630025.1,GeneID:1101349;Name=NP_630025.1;Note=SC10A5.12c%2C unknown%2C len: 39 aa;gbkey=CDS;gene=SC10A5.12c;product=hypothetical protein;protein_id=NP_630025.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6474441	6474444	.	-	.	ID=id7772;Note=possible RBS upstream of SC10A5.12c;gbkey=RBS
NC_003888.3	RefSeq	gene	6474517	6474711	.	+	.	ID=gene5971;Dbxref=GeneID:1101350;Name=SC10A5.13;gbkey=Gene;gene=SC10A5.13;gene_biotype=protein_coding;gene_synonym=SC10A5.13;locus_tag=SCO5908
NC_003888.3	RefSeq	CDS	6474517	6474711	.	+	0	ID=cds5852;Parent=gene5971;Dbxref=Genbank:NP_630026.1,GeneID:1101350;Name=NP_630026.1;Note=SC10A5.13%2C unknown%2C len: 64 aa;gbkey=CDS;gene=SC10A5.13;product=hypothetical protein;protein_id=NP_630026.1;transl_table=11
NC_003888.3	RefSeq	gene	6474708	6474914	.	+	.	ID=gene5972;Dbxref=GeneID:1101351;Name=SC10A5.14;gbkey=Gene;gene=SC10A5.14;gene_biotype=protein_coding;gene_synonym=SC10A5.14;locus_tag=SCO5909
NC_003888.3	RefSeq	CDS	6474708	6474914	.	+	0	ID=cds5853;Parent=gene5972;Dbxref=Genbank:NP_630027.1,GeneID:1101351;Name=NP_630027.1;Note=SC10A5.14%2C unknown%2C len: 68 aa;gbkey=CDS;gene=SC10A5.14;product=hypothetical protein;protein_id=NP_630027.1;transl_table=11
NC_003888.3	RefSeq	gene	6474947	6475291	.	+	.	ID=gene5973;Dbxref=GeneID:1101352;Name=SC10A5.15;gbkey=Gene;gene=SC10A5.15;gene_biotype=protein_coding;gene_synonym=SC10A5.15;locus_tag=SCO5910
NC_003888.3	RefSeq	CDS	6474947	6475291	.	+	0	ID=cds5854;Parent=gene5973;Dbxref=Genbank:NP_630028.1,GeneID:1101352;Name=NP_630028.1;Note=SC10A5.15%2C membrane protein%2C len: 114 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10A5.15;product=hypothetical protein;protein_id=NP_630028.1;transl_table=11
NC_003888.3	RefSeq	gene	6475426	6476991	.	-	.	ID=gene5974;Dbxref=GeneID:1101353;Name=SC10A5.16c;gbkey=Gene;gene=SC10A5.16c;gene_biotype=protein_coding;gene_synonym=SC10A5.16c;locus_tag=SCO5911
NC_003888.3	RefSeq	CDS	6475426	6476991	.	-	0	ID=cds5855;Parent=gene5974;Dbxref=Genbank:NP_630029.1,GeneID:1101353;Name=NP_630029.1;Note=SC10A5.16c%2C possible oligopeptide binding protein%2C len: 521%3B weak similarity to many eg. OPPA_SALTY P06202 periplasmic oligopeptide-binding protein (542 aa)%2C fasta scores%3B opt: 343 z-score: 306.2 E(): 7.4e-10%2C 25.0%25 i dentity in 537 aa overlap. Contains N-terminal signal seque nce;gbkey=CDS;gene=SC10A5.16c;product=oligopeptide binding protein;protein_id=NP_630029.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6477000	6477003	.	-	.	ID=id7773;Note=possible RBS upstream of SC10A5.16c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6477429	6477433	.	+	.	ID=id7774;Note=possible RBS upstream of SC10A5.17;gbkey=RBS
NC_003888.3	RefSeq	gene	6477438	6480035	.	+	.	ID=gene5975;Dbxref=GeneID:1101354;Name=SC10A5.17;gbkey=Gene;gene=SC10A5.17;gene_biotype=protein_coding;gene_synonym=SC10A5.17;locus_tag=SCO5912
NC_003888.3	RefSeq	CDS	6477438	6480035	.	+	0	ID=cds5856;Parent=gene5975;Dbxref=Genbank:NP_630030.1,GeneID:1101354;Name=NP_630030.1;Note=SC10A5.17%2C probable  protease%2C len: 865 aa%3B similar to many members of the peptidase family M9 (zinc me talloprotease) eg. COLA_VIBAL P43154 microbial collagenase precursor from VIBRIO ALGINOLYTICUS (814 aa)%2C fasta scores%3B opt: 1357 z-score: 1196.6 E(): 0%2C 36.0%25 identity in 773 aa overlap. Contains N-terminal signal sequence and PS00142 N eutral zinc metallopeptidases%2C zinc-binding region signatur e;gbkey=CDS;gene=SC10A5.17;product=protease;protein_id=NP_630030.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6479001	6479030	.	+	.	ID=id7775;Dbxref=GeneID:1101354;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC10A5.17
NC_003888.3	RefSeq	ribosome_entry_site	6480188	6480193	.	+	.	ID=id7776;Note=possible RBS upstream of SC10A5.18;gbkey=RBS
NC_003888.3	RefSeq	gene	6480200	6481435	.	+	.	ID=gene5976;Dbxref=GeneID:1101355;Name=SC10A5.18;gbkey=Gene;gene=SC10A5.18;gene_biotype=protein_coding;gene_synonym=SC10A5.18;locus_tag=SCO5913
NC_003888.3	RefSeq	CDS	6480200	6481435	.	+	0	ID=cds5857;Parent=gene5976;Dbxref=Genbank:NP_630031.1,GeneID:1101355;Name=NP_630031.1;Note=SC10A5.18%2C probable  protease%2C len: 411 aa%3B similar to many members of the peptidase family S2A eg. PRT C_STRGR P52320 serine protease c precursor (ec 3.4.21.-) (4 57 aa)%2C fasta scores%3B opt: 326 z-score: 460.9 E(): 1.8e-18%2C 29.8%25 identity in 420 aa overlap. Contains N-terminal sign al sequence and PS00134 Serine proteases%2C trypsin family%2C h istidine active site. Also contains TTA leucine codon%2C a po tential target for action of bldA;gbkey=CDS;gene=SC10A5.18;product=protease;protein_id=NP_630031.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6480209	6480211	.	+	.	ID=id7777;Dbxref=GeneID:1101355;Note=TTA leucine codon%3B potential target for action of bldA;gbkey=misc_feature;gene=SC10A5.18
NC_003888.3	RefSeq	sequence_feature	6480953	6480970	.	+	.	ID=id7778;Dbxref=GeneID:1101355;Note=PS00134 Serine proteases%2C trypsin family%2C histidine active site;gbkey=misc_feature;gene=SC10A5.18
NC_003888.3	RefSeq	gene	6481608	6482600	.	-	.	ID=gene5977;Dbxref=GeneID:1101356;Name=SC10A5.19c;gbkey=Gene;gene=SC10A5.19c;gene_biotype=protein_coding;gene_synonym=SC10A5.19c;locus_tag=SCO5914
NC_003888.3	RefSeq	CDS	6481608	6482600	.	-	0	ID=cds5858;Parent=gene5977;Dbxref=Genbank:NP_630032.1,GeneID:1101356;Name=NP_630032.1;Note=SC10A5.19c%2C probable transcriptional regulator%2C len: 330 aa%3B similar to many membres of the LysR family e.g. MPR R_STRCO P43160 small neutral protease regulatory protein (316 aa)%2C fasta cores%3B opt: 510 z-score: 581.6 E(): 3.4e-25%2C 35.8%25 identity in 324 aa overlap. Contains PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=CDS;gene=SC10A5.19c;product=transcriptional regulator;protein_id=NP_630032.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6482454	6482546	.	-	.	ID=id7779;Dbxref=GeneID:1101356;Note=PS00044 Bacterial regulatory proteins%2C lysR family s ignature;gbkey=misc_feature;gene=SC10A5.19c
NC_003888.3	RefSeq	ribosome_entry_site	6482607	6482611	.	-	.	ID=id7780;Note=possible RBS upstream of SC10A5.19c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6482831	6482835	.	+	.	ID=id7781;Note=possible RBS upstream of SC10A5.20;gbkey=RBS
NC_003888.3	RefSeq	gene	6482843	6483358	.	+	.	ID=gene5978;Dbxref=GeneID:1101357;Name=SC10A5.20;gbkey=Gene;gene=SC10A5.20;gene_biotype=protein_coding;gene_synonym=SC10A5.20;locus_tag=SCO5915
NC_003888.3	RefSeq	CDS	6482843	6483358	.	+	0	ID=cds5859;Parent=gene5978;Dbxref=Genbank:NP_630033.1,GeneID:1101357;Name=NP_630033.1;Note=SC10A5.20%2C unknown%2C len: 171 aa%3B weak similarity to part of TR:P79078 (EMBL:Y10421) DELTA-9 FATTY ACID DESATURA SE (EC 1.14.99.5) from CRYPTOCOCCUS CURVATUS (555 aa)%2C fast a scores%3B opt: 83 z-score: 221.8 E(): 3.7e-05%2C 25.1%25 identi ty in 171 aa overlap;gbkey=CDS;gene=SC10A5.20;product=hypothetical protein;protein_id=NP_630033.1;transl_table=11
NC_003888.3	RefSeq	gene	6483675	6484187	.	+	.	ID=gene5979;Dbxref=GeneID:1101358;Name=SC10A5.21;gbkey=Gene;gene=SC10A5.21;gene_biotype=protein_coding;gene_synonym=SC10A5.21;locus_tag=SCO5916
NC_003888.3	RefSeq	CDS	6483675	6484187	.	+	0	ID=cds5860;Parent=gene5979;Dbxref=Genbank:NP_630034.1,GeneID:1101358;Name=NP_630034.1;Note=SC10A5.21%2C unknown%2C len: 170 aa%3B contains probable helix-turn-helix motif at aa 90 to 111 (Score 1413%2C +4.00 SD);gbkey=CDS;gene=SC10A5.21;product=hypothetical protein;protein_id=NP_630034.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6484956	6484960	.	+	.	ID=id7782;Note=possible RBS upstream of SC10A5.22;gbkey=RBS
NC_003888.3	RefSeq	gene	6484965	6485303	.	+	.	ID=gene5980;Dbxref=GeneID:1101359;Name=SC10A5.22;gbkey=Gene;gene=SC10A5.22;gene_biotype=protein_coding;gene_synonym=SC10A5.22;locus_tag=SCO5917
NC_003888.3	RefSeq	CDS	6484965	6485303	.	+	0	ID=cds5861;Parent=gene5980;Dbxref=Genbank:NP_630035.1,GeneID:1101359;Name=NP_630035.1;Note=SC10A5.22%2C unknown%2C len: 112 aa%3B weakly similar to S . coelicolor HSPR_STRCO P40183 heat shock protein hspr (151 aa)%2C fasta scores%3B opt: 153 z-score: 212.0 E(): 0 .00013%2C 31.7%25 identity in 101 aa overlap;gbkey=CDS;gene=SC10A5.22;product=hypothetical protein;protein_id=NP_630035.1;transl_table=11
NC_003888.3	RefSeq	gene	6486961	6487272	.	-	.	ID=gene5981;Dbxref=GeneID:1101360;Name=SC10A5.23c;gbkey=Gene;gene=SC10A5.23c;gene_biotype=protein_coding;gene_synonym=SC10A5.23c;locus_tag=SCO5918
NC_003888.3	RefSeq	CDS	6486961	6487272	.	-	0	ID=cds5862;Parent=gene5981;Dbxref=Genbank:NP_630036.1,GeneID:1101360;Name=NP_630036.1;Note=SC10A5.23c%2C unknown%2C len: 103 aa;gbkey=CDS;gene=SC10A5.23c;product=hypothetical protein;protein_id=NP_630036.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6487277	6487280	.	-	.	ID=id7783;Note=possible RBS upstream of SC10A5.23c;gbkey=RBS
NC_003888.3	RefSeq	gene	6487321	6487725	.	-	.	ID=gene5982;Dbxref=GeneID:1101361;Name=SC10A5.24c;gbkey=Gene;gene=SC10A5.24c;gene_biotype=protein_coding;gene_synonym=SC10A5.24c;locus_tag=SCO5919
NC_003888.3	RefSeq	CDS	6487321	6487725	.	-	0	ID=cds5863;Parent=gene5982;Dbxref=Genbank:NP_630037.1,GeneID:1101361;Name=NP_630037.1;Note=SC10A5.24c%2C unknown%2C len: 134 aa;gbkey=CDS;gene=SC10A5.24c;product=hypothetical protein;protein_id=NP_630037.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6487732	6487737	.	-	.	ID=id7784;Note=possible RBS upstream of SC10A5.24c;gbkey=RBS
NC_003888.3	RefSeq	gene	6487772	6489268	.	-	.	ID=gene5983;Dbxref=GeneID:1101362;Name=SC10A5.25c;gbkey=Gene;gene=SC10A5.25c;gene_biotype=protein_coding;gene_synonym=SC10A5.25c;locus_tag=SCO5920
NC_003888.3	RefSeq	CDS	6487772	6489268	.	-	0	ID=cds5864;Parent=gene5983;Dbxref=Genbank:NP_630038.1,GeneID:1101362;Name=NP_630038.1;Note=SC10A5.25c%2C probable DEAD-box RNA helicase%2C len: 498 aa%3B similar to many e.g. RHLE_ECOLI P25888 ATP-dependent RNA helicase RhlE (454 aa)%2C fasta scores%3B opt: 845 z -score: 770.8 E(): 0%2C 36.2%25 identity in 434 aa overlap. Con tains possible DEAD-box at aa 221-224 (1 mismatch to prosit e consensus)%2C 2x PS00017 ATP/GTP-binding site motif A (P-lo op) and PS00135 Serine proteases%2C trypsin family%2C serine ac tive site%2C though the last may be spurious. Also contains P fam match to entry helicase_C PF00271%2C Helicases conserved C-terminal domain%2C score 108.77 and Pfam match to entry DEA D PF00270%2C DEAD and DEAH box helicases%2C score 236.10;gbkey=CDS;gene=SC10A5.25c;product=DEAD/DEAH box helicase;protein_id=NP_630038.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6488039	6488074	.	-	.	ID=id7785;Dbxref=GeneID:1101362;Note=PS00135 Serine proteases%2C trypsin family%2C serine act ive site;gbkey=misc_feature;gene=SC10A5.25c
NC_003888.3	RefSeq	sequence_feature	6488240	6488263	.	-	.	ID=id7786;Dbxref=GeneID:1101362;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC10A5.25c
NC_003888.3	RefSeq	sequence_feature	6488300	6488545	.	-	.	ID=id7787;Dbxref=GeneID:1101362;Note=Pfam match to entry helicase_C PF00271%2C Helicases co nserved C-terminal domain%2C score 108.77;gbkey=misc_feature;gene=SC10A5.25c
NC_003888.3	RefSeq	sequence_feature	6488591	6489268	.	-	.	ID=id7788;Dbxref=GeneID:1101362;Note=Pfam match to entry DEAD PF00270%2C DEAD and DEAH box helicases%2C score 236.10;gbkey=misc_feature;gene=SC10A5.25c
NC_003888.3	RefSeq	sequence_feature	6488909	6488932	.	-	.	ID=id7789;Dbxref=GeneID:1101362;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC10A5.25c
NC_003888.3	RefSeq	ribosome_entry_site	6489278	6489281	.	-	.	ID=id7790;Note=possible RBS upstream of SC10A5.25c;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	6489555	6489598	.	+	.	ID=id7791;Note=hairpin loop with 19/20 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6489617	6489820	.	-	.	ID=gene5984;Dbxref=GeneID:1101363;Name=SC10A5.26c;gbkey=Gene;gene=SC10A5.26c;gene_biotype=protein_coding;gene_synonym=SC10A5.26c,scoF5;locus_tag=SCO5921
NC_003888.3	RefSeq	CDS	6489617	6489820	.	-	0	ID=cds5865;Parent=gene5984;Dbxref=Genbank:NP_630039.1,GeneID:1101363;Name=NP_630039.1;Note=SC10A5.26c%2C scoF5%2C cold-shock domain protein%2C len: 67 aa%3B highly similar to many e.g. CSPF_STRCO P48859 cold shock protein ScoF from S. coelicolor (67 aa)%2C fasta scores%3B opt: 383 z-score: 750.4 E(): 0%2C 82.1%25 identity in 67 aa overlap. Contains PS00352 'Cold-shock' DNA-binding domain signature;gbkey=CDS;gene=SC10A5.26c;product=cold-shock domain-containing protein;protein_id=NP_630039.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6489719	6489778	.	-	.	ID=id7792;Dbxref=GeneID:1101363;Note=PS00352 'Cold-shock' DNA-binding domain signature;gbkey=misc_feature;gene=SC10A5.26c
NC_003888.3	RefSeq	ribosome_entry_site	6489828	6489833	.	-	.	ID=id7793;Note=possible RBS upstream of SC10A5.26c;gbkey=RBS
NC_003888.3	RefSeq	gene	6490462	6491442	.	-	.	ID=gene5985;Dbxref=GeneID:1101364;Name=SC10A5.27c;gbkey=Gene;gene=SC10A5.27c;gene_biotype=protein_coding;gene_synonym=SC10A5.27c;locus_tag=SCO5922
NC_003888.3	RefSeq	CDS	6490462	6491442	.	-	0	ID=cds5866;Parent=gene5985;Dbxref=Genbank:NP_630040.1,GeneID:1101364;Name=NP_630040.1;Note=SC10A5.27c%2C possible oxidoreductase%2C len: 326 aa%3B some similarity to many members of the SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY (SDR) eg. YGFF_ECOLI P52037 hypothet ical oxidoreductase (247 aa)%2C fasta scores%3B opt: 96 z-score : 310.6 E(): 4.2e-10%2C 29.1%25 identity in 213 aa overlap. Con tains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC10A5.27c;product=short chain dehydrogenase;protein_id=NP_630040.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6490591	6490614	.	-	.	ID=id7794;Dbxref=GeneID:1101364;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC10A5.27c
NC_003888.3	RefSeq	gene	6492065	6493150	.	-	.	ID=gene5986;Dbxref=GeneID:1101365;Name=SC10A5.28c;gbkey=Gene;gene=SC10A5.28c;gene_biotype=protein_coding;gene_synonym=SC10A5.28c;locus_tag=SCO5923
NC_003888.3	RefSeq	CDS	6492065	6493150	.	-	0	ID=cds5867;Parent=gene5986;Dbxref=Genbank:NP_630041.1,GeneID:1101365;Name=NP_630041.1;gbkey=CDS;gene=SC10A5.28c;product=ABC transporter ATP-binding protein;protein_id=NP_630041.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6492689	6492733	.	-	.	ID=id7795;Dbxref=GeneID:1101365;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC10A5.28c
NC_003888.3	RefSeq	sequence_feature	6492743	6493150	.	-	.	ID=id7796;Dbxref=GeneID:1101365;Note=Pfam match to entry ABC_tran PF00005%2C ABC transporte rs%2C score 35.90;gbkey=misc_feature;gene=SC10A5.28c
NC_003888.3	RefSeq	sequence_feature	6493022	6493045	.	-	.	ID=id7797;Dbxref=GeneID:1101365;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC10A5.28c
NC_003888.3	RefSeq	gene	6493143	6494912	.	-	.	ID=gene5987;Dbxref=GeneID:1101366;Name=SC10A5.29c;gbkey=Gene;gene=SC10A5.29c;gene_biotype=protein_coding;gene_synonym=SC10A5.29c;locus_tag=SCO5924
NC_003888.3	RefSeq	CDS	6493143	6494912	.	-	0	ID=cds5868;Parent=gene5987;Dbxref=Genbank:NP_630042.1,GeneID:1101366;Name=NP_630042.1;Note=SC10A5.29c%2C probable integral membrane protein%2C len: 589 aa%3B similar to many permeases eg. TR:Q44123 (EMBL:U050 42) iron utilisation protein AFUB from Actinobacillus pleur opneumoniae (687 aa)%2C fasta scores%3B opt: 564 z-score: 426.3 E(): 1.5e-16%2C 25.0%25 identity in 547 aa overlap;gbkey=CDS;gene=SC10A5.29c;product=hypothetical protein;protein_id=NP_630042.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6493160	6493163	.	-	.	ID=id7798;Dbxref=GeneID:1101366;Note=possible RBS upstream of SC10A5.28c;gbkey=RBS;gene=SC10A5.29c
NC_003888.3	RefSeq	ribosome_entry_site	6494918	6494921	.	-	.	ID=id7799;Note=possible RBS upstream of SC10A5.29c;gbkey=RBS
NC_003888.3	RefSeq	gene	6494967	6495218	.	-	.	ID=gene5988;Dbxref=GeneID:1101367;Name=SC10A5.30c;gbkey=Gene;gene=SC10A5.30c;gene_biotype=protein_coding;gene_synonym=SC10A5.30c;locus_tag=SCO5925
NC_003888.3	RefSeq	CDS	6494967	6495218	.	-	0	ID=cds5869;Parent=gene5988;Dbxref=Genbank:NP_630043.1,GeneID:1101367;Name=NP_630043.1;Note=SC10A5.30c%2C unknown%2C len: 83 aa;gbkey=CDS;gene=SC10A5.30c;product=hypothetical protein;protein_id=NP_630043.1;transl_table=11
NC_003888.3	RefSeq	gene	6495215	6495736	.	-	.	ID=gene5989;Dbxref=GeneID:1101368;Name=SC10A5.31c;gbkey=Gene;gene=SC10A5.31c;gene_biotype=protein_coding;gene_synonym=SC10A5.31c;locus_tag=SCO5926
NC_003888.3	RefSeq	CDS	6495215	6495736	.	-	0	ID=cds5870;Parent=gene5989;Dbxref=Genbank:NP_630044.1,GeneID:1101368;Name=NP_630044.1;Note=SC10A5.31c%2C unknown%2C len: 173 aa%3B highly similar to the C-terminus of many prokaryotic and eukaryotic aconitase s eg. ACO1_ECOLI P25516 aconitate hydratase 1 (ec 4.2.1.3) (890 aa)%2C fasta scores%3B opt: 422 z-score: 567.1 E(): 2.2e-2 4%2C 49.3%25 identity in 138 aa overlap;gbkey=CDS;gene=SC10A5.31c;product=hypothetical protein;protein_id=NP_630044.1;transl_table=11
NC_003888.3	RefSeq	gene	6495872	6496093	.	-	.	ID=gene5990;Dbxref=GeneID:1101369;Name=SC10A5.32c;gbkey=Gene;gene=SC10A5.32c;gene_biotype=protein_coding;gene_synonym=SC10A5.32c;locus_tag=SCO5927
NC_003888.3	RefSeq	CDS	6495872	6496093	.	-	0	ID=cds5871;Parent=gene5990;Dbxref=Genbank:NP_630045.1,GeneID:1101369;Name=NP_630045.1;Note=SC10A5.32c%2C unknown%2C len: 73;gbkey=CDS;gene=SC10A5.32c;product=hypothetical protein;protein_id=NP_630045.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6496104	6496107	.	-	.	ID=id7800;Note=possible RBS upstream of SC10A5.32c;gbkey=RBS
NC_003888.3	RefSeq	gene	6496282	6496986	.	-	.	ID=gene5991;Dbxref=GeneID:1101370;Name=SC10A5.33c;gbkey=Gene;gene=SC10A5.33c;gene_biotype=protein_coding;gene_synonym=SC10A5.33c;locus_tag=SCO5928
NC_003888.3	RefSeq	CDS	6496282	6496986	.	-	0	ID=cds5872;Parent=gene5991;Dbxref=Genbank:NP_630046.1,GeneID:1101370;Name=NP_630046.1;Note=SC10A5.33c%2C unknown%2C len: 234 aa;gbkey=CDS;gene=SC10A5.33c;product=hypothetical protein;protein_id=NP_630046.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6496996	6497000	.	-	.	ID=id7801;Note=possible RBS upstream of SC10A5.33c;gbkey=RBS
NC_003888.3	RefSeq	gene	6497455	6498231	.	-	.	ID=gene5992;Dbxref=GeneID:1101371;Name=SC10A5.34c;gbkey=Gene;gene=SC10A5.34c;gene_biotype=protein_coding;gene_synonym=SC10A5.34c;locus_tag=SCO5929
NC_003888.3	RefSeq	CDS	6497455	6498231	.	-	0	ID=cds5873;Parent=gene5992;Dbxref=Genbank:NP_630047.1,GeneID:1101371;Name=NP_630047.1;Note=SC10A5.34c%2C possible oxidoreductase%2C len: 258 aa%3B very weakly similar to many eg. TR:G2673979 (EMBL:U94980) 2%2C4 -DIENOYL-COA REDUCTASE (HUMAN) (335 aa)%2C fasta scores%3B opt: 167 z-score: 231.2 E(): 1.1e-05%2C 21.2%25 identity in 208 aa overlap. Contains PS01070 DNA/RNA non-specific endonucleases active site;gbkey=CDS;gene=SC10A5.34c;product=oxidoreductase;protein_id=NP_630047.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6498007	6498033	.	-	.	ID=id7802;Dbxref=GeneID:1101371;Note=PS01070 DNA/RNA non-specific endonucleases active si te;gbkey=misc_feature;gene=SC10A5.34c
NC_003888.3	RefSeq	gene	6498298	6499377	.	+	.	ID=gene5993;Dbxref=GeneID:1101372;Name=SC10A5.35;gbkey=Gene;gene=SC10A5.35;gene_biotype=protein_coding;gene_synonym=SC10A5.35;locus_tag=SCO5930
NC_003888.3	RefSeq	CDS	6498298	6499377	.	+	0	ID=cds5874;Parent=gene5993;Dbxref=Genbank:NP_630048.1,GeneID:1101372;Name=NP_630048.1;Note=SC10A5.35%2C possible NTP pyrophosphohydrolase%2C len: 3 59 aa%3B similar to TR:Q53738 (EMBL:X92429) NTP pyrophosphohydrolase PUR7 from S. alboniger (152 aa)%2C fasta scores%3B opt: 467 z-score: 614.5 E(): 5e-27%2C 54.8%25 identity in 135 aa overlap. Contains PS00893 mutT domain signature;gbkey=CDS;gene=SC10A5.35;product=NTP pyrophosphohydrolase;protein_id=NP_630048.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6498427	6498486	.	+	.	ID=id7803;Dbxref=GeneID:1101372;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SC10A5.35
NC_003888.3	RefSeq	gene	6499512	6500945	.	-	.	ID=gene5994;Dbxref=GeneID:1101373;Name=SC10A5.36c;gbkey=Gene;gene=SC10A5.36c;gene_biotype=protein_coding;gene_synonym=SC10A5.36c,xlnA;locus_tag=SCO5931
NC_003888.3	RefSeq	CDS	6499512	6500945	.	-	0	ID=cds5875;Parent=gene5994;Dbxref=Genbank:NP_733679.1,GeneID:1101373;Name=NP_733679.1;Note=SC10A5.36c%2C xlnA%2C xylanase A precursor%2C partial CDS%2C len >383 aa%3B overlaps and extends ORF from neighbouring cosmid SC7H1.01c%3B almost identical to XYNA_STRLI P26514 endo- 1%2C4-beta-xylanase a precursor (477 aa) (99.2%25 identity in 383 aa overlap). Conatains PS00591 Glycosyl hydrolases famil y 10 active site and Pfam match to entry glycosyl_hydro3 PF 00331%2C Glycosyl hydrolases family 10%2C score 183.41. Also si milar in part to S. coelicolor SC7H1.02%2C abfB%2C arabinofuran osidase (E(): 1.4e-35%2C 58.4%25 identity in 149 aa overlap)~SC7H1.01c%2C xlnA%2C xylanase A precursor%2C partial CDS%2C len >147 aa%3B almost identical to S. lividans XYNA_STRLI P26514 endo-1%2C4-beta-xylanase a precursor (ec 3.2.1.8) (XYLANASE A) (477 aa)%2C fasta scores%3B opt: 926 z-score: 1591.1 E(): 0%2C 97.9%25 identity in 146 aa overlap. Contains N-terminal signal sequence and Pfam match to entry glycosyl_hydro3 PF00331%2C Glycosyl hydrolases family 10%2C score 107.60;gbkey=CDS;gene=SC10A5.36c;product=xylanase A;protein_id=NP_733679.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6500106	6500138	.	-	.	ID=id7804;Dbxref=GeneID:1101373;Note=PS00591 Glycosyl hydrolases family 10 active site;gbkey=misc_feature;gene=SC10A5.36c
NC_003888.3	RefSeq	sequence_feature	6500346	6500663	.	-	.	ID=id7805;Dbxref=GeneID:1101373;Note=Pfam match to entry glycosyl_hydro3 PF00331%2C Glycosy l hydrolases family 10%2C score 183.41;gbkey=misc_feature;gene=SC10A5.36c
NC_003888.3	RefSeq	sequence_feature	6500505	6503089	.	-	.	ID=id7806;Note=96%25 match to EM_BA:SLXLNA M64551 Streptomyces lividans arabinofuranosidase precursor (abfB) and xylanase A precursor (xlnA) genes from: 166 to: 2759;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6500505	6501662	.	+	.	ID=id7807;Note=overlap with cosmid St10A5;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6500505	6500693	.	-	.	ID=id7808;Dbxref=GeneID:1101373;Note=Pfam match to entry glycosyl_hydro3 PF00331%2C Glycosyl hydrolases family 10%2C from 1 to 71%2C score 107.60;gbkey=misc_feature;gene=SC10A5.36c
NC_003888.3	RefSeq	sequence_feature	6500505	6500663	.	+	.	ID=id7809;Note=overlap with Cosmid St7H1 from: 1 to: 159;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6500953	6500957	.	-	.	ID=id7810;Note=possible RBS upstream of xlnA;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6501327	6501330	.	+	.	ID=id7811;Note=possible RBS upstream of abfB;gbkey=RBS
NC_003888.3	RefSeq	gene	6501336	6502763	.	+	.	ID=gene5995;Dbxref=GeneID:1101374;Name=abfB;gbkey=Gene;gene=abfB;gene_biotype=protein_coding;gene_synonym=abfB;locus_tag=SCO5932
NC_003888.3	RefSeq	CDS	6501336	6502763	.	+	0	ID=cds5876;Parent=gene5995;Dbxref=Genbank:NP_630049.1,GeneID:1101374;Name=NP_630049.1;Note=SC7H1.02%2C abfB%2C arabinofuranosidase precursor%2C len: 475 aa%3B almost identical to S. lividans TR:P96463 (EMBL:M64551) arabinofuranosidase precursor (EC 3.2.1.55)(alpha-l-arabinofuranosidase) (arabinosidase) (478 aa)%2C fasta scores%3B opt: 3129 z-score: 1807.5 E(): 0%2C 95.8%25 identity in 477 aa overlap. Contains N-terminal signal sequence;gbkey=CDS;gene=abfB;product=arabinofuranosidase;protein_id=NP_630049.1;transl_table=11
NC_003888.3	RefSeq	gene	6502747	6503922	.	-	.	ID=gene5996;Dbxref=GeneID:1101375;Name=SC7H1.03c;gbkey=Gene;gene=SC7H1.03c;gene_biotype=protein_coding;gene_synonym=SC7H1.03c;locus_tag=SCO5933
NC_003888.3	RefSeq	CDS	6502747	6503922	.	-	0	ID=cds5877;Parent=gene5996;Dbxref=Genbank:NP_630050.1,GeneID:1101375;Name=NP_630050.1;Note=SC7H1.03c%2C possible membrane protein%2C len: 391 aa%3B C-terminal part similar to TR:Q9L0E7 (EMBL:AL161803) Streptomyces coelicolor hypothetical protein SCD31.20%2C 181 aa%3B fasta scores: opt: 592 Z-score: 665.9 E(): 1.8e-29%3B 53.514%25 identity in 185 aa overlap. Contains possible hydrophobic membrane spanning regions. Contains PS00213 Lipocalin signature%2C though this may be spurious;gbkey=CDS;gene=SC7H1.03c;product=hypothetical protein;protein_id=NP_630050.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6503554	6503595	.	-	.	ID=id7812;Dbxref=GeneID:1101375;Note=PS00213 Lipocalin signature;gbkey=misc_feature;gene=SC7H1.03c
NC_003888.3	RefSeq	ribosome_entry_site	6503930	6503935	.	-	.	ID=id7813;Note=possible RBS upstream of SC7H1.03c;gbkey=RBS
NC_003888.3	RefSeq	gene	6504150	6504752	.	+	.	ID=gene5997;Dbxref=GeneID:1101376;Name=SC7H1.04;gbkey=Gene;gene=SC7H1.04;gene_biotype=protein_coding;gene_synonym=SC7H1.04;locus_tag=SCO5934
NC_003888.3	RefSeq	CDS	6504150	6504752	.	+	0	ID=cds5878;Parent=gene5997;Dbxref=Genbank:NP_630051.1,GeneID:1101376;Name=NP_630051.1;Note=SC7H1.04%2C possible sigma factor%2C len: 200 aa%3B some similarity to sigma factors (ECF subfamily) from diverse organisms e.g. Alcaligenes eutrophus CNRH_ALCEU P37978 rna polymerase sigma factor cnrh (191 aa)%2C fasta scores%3B opt: 230 z-score: 337.3 E(): 1.4e-11%2C 29.5%25 identity in 183 aa overlap;gbkey=CDS;gene=SC7H1.04;product=sigma factor;protein_id=NP_630051.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6504735	6504742	.	+	.	ID=id7814;Dbxref=GeneID:1101376;Note=possible RBS upstream of SC7H1.05;gbkey=RBS;gene=SC7H1.04
NC_003888.3	RefSeq	gene	6504749	6505642	.	+	.	ID=gene5998;Dbxref=GeneID:1101377;Name=SC7H1.05;gbkey=Gene;gene=SC7H1.05;gene_biotype=protein_coding;gene_synonym=SC7H1.05;locus_tag=SCO5935
NC_003888.3	RefSeq	CDS	6504749	6505642	.	+	0	ID=cds5879;Parent=gene5998;Dbxref=Genbank:NP_630052.1,GeneID:1101377;Name=NP_630052.1;Note=SC7H1.05%2C membrane protein%2C len: 297 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC7H1.05;product=hypothetical protein;protein_id=NP_630052.1;transl_table=11
NC_003888.3	RefSeq	gene	6505626	6505787	.	-	.	ID=gene5999;Dbxref=GeneID:1101378;Name=SC7H1.06;gbkey=Gene;gene=SC7H1.06;gene_biotype=protein_coding;gene_synonym=SC7H1.06;locus_tag=SCO5936
NC_003888.3	RefSeq	CDS	6505626	6505787	.	-	0	ID=cds5880;Parent=gene5999;Dbxref=Genbank:NP_630053.1,GeneID:1101378;Name=NP_630053.1;Note=SC7H1.06%2C unknown%2C len: 53 aa;gbkey=CDS;gene=SC7H1.06;product=hypothetical protein;protein_id=NP_630053.1;transl_table=11
NC_003888.3	RefSeq	gene	6505802	6506170	.	-	.	ID=gene6000;Dbxref=GeneID:1101379;Name=SC7H1.07c;gbkey=Gene;gene=SC7H1.07c;gene_biotype=protein_coding;gene_synonym=SC7H1.07c;locus_tag=SCO5937
NC_003888.3	RefSeq	CDS	6505802	6506170	.	-	0	ID=cds5881;Parent=gene6000;Dbxref=Genbank:NP_630054.1,GeneID:1101379;Name=NP_630054.1;Note=SC7H1.07c%2C unknown%2C len: 122 aa;gbkey=CDS;gene=SC7H1.07c;product=hypothetical protein;protein_id=NP_630054.1;transl_table=11
NC_003888.3	RefSeq	gene	6506167	6506775	.	-	.	ID=gene6001;Dbxref=GeneID:1101380;Name=SC7H1.08c;gbkey=Gene;gene=SC7H1.08c;gene_biotype=protein_coding;gene_synonym=SC7H1.08c;locus_tag=SCO5938
NC_003888.3	RefSeq	CDS	6506167	6506775	.	-	0	ID=cds5882;Parent=gene6001;Dbxref=Genbank:NP_630055.1,GeneID:1101380;Name=NP_630055.1;Note=SC7H1.08c%2C unknown%2C len: 202 aa%3B some similarity in C-terminus to Mycobacterium tuberculosis hypothetical protein TR:P71839 (EMBL:Z80226) MTCY369.30C (129 aa)%2C fasta scores%3B opt: 240 z-score: 383.0 E(): 3.8e-14%2C 41.2%25 identity in 102 aa overlap;gbkey=CDS;gene=SC7H1.08c;product=hypothetical protein;protein_id=NP_630055.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6506178	6506181	.	-	.	ID=id7815;Dbxref=GeneID:1101380;Note=possible RBS upstream of SC7H1.07c;gbkey=RBS;gene=SC7H1.08c
NC_003888.3	RefSeq	gene	6506808	6507281	.	+	.	ID=gene6002;Dbxref=GeneID:1101381;Name=SC7H1.09;gbkey=Gene;gene=SC7H1.09;gene_biotype=protein_coding;gene_synonym=SC7H1.09;locus_tag=SCO5939
NC_003888.3	RefSeq	CDS	6506808	6507281	.	+	0	ID=cds5883;Parent=gene6002;Dbxref=Genbank:NP_630056.1,GeneID:1101381;Name=NP_630056.1;Note=SC7H1.09%2C probable peptidylprolyl isomerase%2C len: 157 aa%3B similar to many eg. Streptomyces chrysomallus TR:P77949 (EMBL:U64692) cyclophilin sccypb (EC 5.2.1.8) (peptidylprolyl isomerase) (175 aa)%2C fasta scores%3B opt: 402 z-score: 552.5 E(): 1.4e-23%2C 49.6%25 identity in 123 aa overlap. Contains Pfam match to entry pro_isomerase PF00160%2C Peptidyl-prolyl cis-trans isomerases%2C score 77.82;gbkey=CDS;gene=SC7H1.09;product=peptidylprolyl isomerase;protein_id=NP_630056.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6506877	6507179	.	+	.	ID=id7816;Dbxref=GeneID:1101381;Note=Pfam match to entry pro_isomerase PF00160%2C Peptidyl-prolyl cis-trans isomerases%2C from 43 to 158%2C score 77.82;gbkey=misc_feature;gene=SC7H1.09
NC_003888.3	RefSeq	ribosome_entry_site	6507318	6507321	.	+	.	ID=id7817;Note=possible RBS upstream of SC7H1.10;gbkey=RBS
NC_003888.3	RefSeq	gene	6507329	6507988	.	+	.	ID=gene6003;Dbxref=GeneID:1101382;Name=SC7H1.10;gbkey=Gene;gene=SC7H1.10;gene_biotype=protein_coding;gene_synonym=SC7H1.10;locus_tag=SCO5940
NC_003888.3	RefSeq	CDS	6507329	6507988	.	+	0	ID=cds5884;Parent=gene6003;Dbxref=Genbank:NP_630057.1,GeneID:1101382;Name=NP_630057.1;Note=SC7H1.10%2C probable transferase%2C len: 219 aa%3B similar to eg. MENG_ECOLI P32165 s-adenosylmethionine:2-demethylmenaquinone methyltransferase (161 aa)%2C fasta scores%3B opt: 211 z-score: 265.9 E(): 1.3e-07%2C 34.1%25 identity in 126 aa overlap;gbkey=CDS;gene=SC7H1.10;product=hypothetical protein;protein_id=NP_630057.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6507973	6507977	.	+	.	ID=id7818;Dbxref=GeneID:1101382;Note=possible RBS upstream of SC7H1.11;gbkey=RBS;gene=SC7H1.10
NC_003888.3	RefSeq	gene	6507985	6509133	.	+	.	ID=gene6004;Dbxref=GeneID:1101383;Name=SC7H1.11;gbkey=Gene;gene=SC7H1.11;gene_biotype=protein_coding;gene_synonym=SC7H1.11;locus_tag=SCO5941
NC_003888.3	RefSeq	CDS	6507985	6509133	.	+	0	ID=cds5885;Parent=gene6004;Dbxref=Genbank:NP_630058.1,GeneID:1101383;Name=NP_630058.1;Note=SC7H1.11%2C probable aminotransferase%2C len: 382%3B similar to many eg. AAT_BACST Q59228 aspartate aminotransferase (ec 2.6.1.1 (393 aa)%2C fasta scores%3B opt: 683 z-score: 686.1 E(): 5.1e-31%2C 35.0%25 identity in 374 aa overlap. Contains Pfam match to entry aminotran_1 PF00155%2C Aminotransferases class-I%2C score 177.68;gbkey=CDS;gene=SC7H1.11;product=aminotransferase;protein_id=NP_630058.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6507988	6509121	.	+	.	ID=id7819;Dbxref=GeneID:1101383;Note=Pfam match to entry aminotran_1 PF00155%2C Aminotransferases class-I%2C from 1 to 433%2C score 177.68;gbkey=misc_feature;gene=SC7H1.11
NC_003888.3	RefSeq	ribosome_entry_site	6509205	6509209	.	+	.	ID=id7820;Note=possible RBS upstream of SC7H1.12;gbkey=RBS
NC_003888.3	RefSeq	gene	6509216	6509833	.	+	.	ID=gene6005;Dbxref=GeneID:1101384;Name=SC7H1.12;gbkey=Gene;gene=SC7H1.12;gene_biotype=protein_coding;gene_synonym=SC7H1.12;locus_tag=SCO5942
NC_003888.3	RefSeq	CDS	6509216	6509833	.	+	0	ID=cds5886;Parent=gene6005;Dbxref=Genbank:NP_630059.1,GeneID:1101384;Name=NP_630059.1;Note=SC7H1.12%2C unknown%2C len: 205 aa%3B very weak similarity to downstream ORF SC7H1.21 (203 aa)%2C (E(): 0.085%2C 26.9%25 identity in 208 aa overlap). Contains possible Helix-turn-helix motif at aa 41-62%2C Score 1089 (+2.90 SD);gbkey=CDS;gene=SC7H1.12;product=hypothetical protein;protein_id=NP_630059.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6510014	6510019	.	+	.	ID=id7821;Note=possible RBS upstream of SC7H1.13;gbkey=RBS
NC_003888.3	RefSeq	gene	6510025	6510810	.	+	.	ID=gene6006;Dbxref=GeneID:1101385;Name=SC7H1.13;gbkey=Gene;gene=SC7H1.13;gene_biotype=protein_coding;gene_synonym=SC7H1.13;locus_tag=SCO5943
NC_003888.3	RefSeq	CDS	6510025	6510810	.	+	0	ID=cds5887;Parent=gene6006;Dbxref=Genbank:NP_630060.1,GeneID:1101385;Name=NP_630060.1;Note=SC7H1.13%2C probable hydrolase%2C len: 261%3B weak similarity to several diverse hydrolases eg. TODF_PSEPU P23133 2-hydroxy-6-oxo-2%2C4-heptadienoate hydrolase (276 aa)%2C fasta scores%3B opt: 196 z-score: 344.3 E(): 5.5e-12%2C 30.7%25 identity in 270 aa overlap;gbkey=CDS;gene=SC7H1.13;product=hydrolase;protein_id=NP_630060.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6510796	6510799	.	+	.	ID=id7822;Dbxref=GeneID:1101385;Note=possible RBS upstream of SC7H1.14;gbkey=RBS;gene=SC7H1.13
NC_003888.3	RefSeq	gene	6510803	6511951	.	+	.	ID=gene6007;Dbxref=GeneID:1101386;Name=SC7H1.14;gbkey=Gene;gene=SC7H1.14;gene_biotype=protein_coding;gene_synonym=SC7H1.14;locus_tag=SCO5944
NC_003888.3	RefSeq	CDS	6510803	6511951	.	+	0	ID=cds5888;Parent=gene6007;Dbxref=Genbank:NP_630061.1,GeneID:1101386;Name=NP_630061.1;Note=SC7H1.14%2C unknown%2C len: 382 aa;gbkey=CDS;gene=SC7H1.14;product=hypothetical protein;protein_id=NP_630061.1;transl_table=11
NC_003888.3	RefSeq	gene	6511948	6513768	.	+	.	ID=gene6008;Dbxref=GeneID:1101387;Name=SC7H1.15;gbkey=Gene;gene=SC7H1.15;gene_biotype=protein_coding;gene_synonym=SC7H1.15;locus_tag=SCO5945
NC_003888.3	RefSeq	CDS	6511948	6513768	.	+	0	ID=cds5889;Parent=gene6008;Dbxref=Genbank:NP_630062.1,GeneID:1101387;Name=NP_630062.1;Note=SC7H1.15%2C probable transferase%2C len: 606 aa%3B similar to TR:Q54353 (EMBL:X64651) S.lincolnensis lmbA gene for lincomycin condensing protein (601 aa)%2C fasta scores%3B opt: 921 z-score: 1470.0 E(): 0%2C 45.8%25 identity in 600 aa overlap and to other gamma-glutamyl transferases;gbkey=CDS;gene=SC7H1.15;product=transferase;protein_id=NP_630062.1;transl_table=11
NC_003888.3	RefSeq	gene	6513765	6514538	.	+	.	ID=gene6009;Dbxref=GeneID:1101388;Name=SC7H1.16;gbkey=Gene;gene=SC7H1.16;gene_biotype=protein_coding;gene_synonym=SC7H1.16;locus_tag=SCO5946
NC_003888.3	RefSeq	CDS	6513765	6514538	.	+	0	ID=cds5890;Parent=gene6009;Dbxref=Genbank:NP_630063.1,GeneID:1101388;Name=NP_630063.1;Note=SC7H1.16%2C membrane protein%2C Gly-%2C Ala-rich protein%2C len: 257 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7H1.16;product=hypothetical protein;protein_id=NP_630063.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6514543	6514547	.	+	.	ID=id7823;Note=possible RBS upstream of SC7H1.17;gbkey=RBS
NC_003888.3	RefSeq	gene	6514553	6515950	.	+	.	ID=gene6010;Dbxref=GeneID:1101389;Name=SC7H1.17;gbkey=Gene;gene=SC7H1.17;gene_biotype=protein_coding;gene_synonym=SC7H1.17;locus_tag=SCO5947
NC_003888.3	RefSeq	CDS	6514553	6515950	.	+	0	ID=cds5891;Parent=gene6010;Dbxref=Genbank:NP_630064.1,GeneID:1101389;Name=NP_630064.1;Note=SC7H1.17%2C probable integral membrane protein%2C len: 465 aa%3B weakly similar to many eg. Mycobacterium tuberculosis TR:O07753 (EMBL:Z97193) MTCY180.41C (687 aa)%2C fasta scores%3B opt: 440 z-score: 332.4 E(): 2.5e-11%2C 26.6%25 identity in 413 aa overlap. Contains possible hydrophobc membrane spanning regions;gbkey=CDS;gene=SC7H1.17;product=hypothetical protein;protein_id=NP_630064.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6515934	6515939	.	+	.	ID=id7824;Dbxref=GeneID:1101389;Note=possible RBS upstream of SC7H11.18;gbkey=RBS;gene=SC7H1.17
NC_003888.3	RefSeq	gene	6515947	6517140	.	+	.	ID=gene6011;Dbxref=GeneID:1101390;Name=SC7H1.18;gbkey=Gene;gene=SC7H1.18;gene_biotype=protein_coding;gene_synonym=SC7H1.18;locus_tag=SCO5948
NC_003888.3	RefSeq	CDS	6515947	6517140	.	+	0	ID=cds5892;Parent=gene6011;Dbxref=Genbank:NP_630065.1,GeneID:1101390;Name=NP_630065.1;Note=SC7H1.18%2C possible oxidoreductase%2C len: 397 aa%3B weak similarity to TCMG_STRGA P39888 tetracenomycin polyketide synthesis hydroxylase (572 aa)%2C fasta scores%3B opt: 72 z-score: 275.1 E(): 4e-08%2C 26.0%25 identity in 369 aa overlap. Also similar to M. tuberculosis hypothetical protein Y08M_MYCTU Q11058 MTCY50.22c (372 aa)%2C fasta scores%3B opt: 949 z-score: 613.3 E(): 5.8e-27%2C 45.9%25 identity in 355 aa overlap;gbkey=CDS;gene=SC7H1.18;product=oxidoreductase;protein_id=NP_630065.1;transl_table=11
NC_003888.3	RefSeq	gene	6517425	6517973	.	+	.	ID=gene6012;Dbxref=GeneID:1101391;Name=SC7H1.19;gbkey=Gene;gene=SC7H1.19;gene_biotype=protein_coding;gene_synonym=SC7H1.19;locus_tag=SCO5949
NC_003888.3	RefSeq	CDS	6517425	6517973	.	+	0	ID=cds5893;Parent=gene6012;Dbxref=Genbank:NP_630066.1,GeneID:1101391;Name=NP_630066.1;Note=SC7H1.19%2C unknown%2C len: 182 aa;gbkey=CDS;gene=SC7H1.19;product=hypothetical protein;protein_id=NP_630066.1;transl_table=11
NC_003888.3	RefSeq	gene	6518093	6519544	.	-	.	ID=gene6013;Dbxref=GeneID:1101392;Name=SC7H1.20c;gbkey=Gene;gene=SC7H1.20c;gene_biotype=protein_coding;gene_synonym=SC7H1.20c;locus_tag=SCO5950
NC_003888.3	RefSeq	CDS	6518093	6519544	.	-	0	ID=cds5894;Parent=gene6013;Dbxref=Genbank:NP_630067.1,GeneID:1101392;Name=NP_630067.1;Note=SC7H1.20c. probable export protein%2C len: 483%3B similar to many members of the drug resistance translocase family eg. Streptomyces lipmanii PUR8_STRLP P42670 puromycin resistance protein pur8 (503 aa)%2C fasta scores%3B opt: 907 z-score: 636.6 E(): 2.9e-28%2C 38.6%25 identity in 477 aa overlap. Also weakly similar to upstream protein SC7H1.27 (533 aa) (E(): 7.9e-15%2C 28.6%25 identity in 461 aa overlap);gbkey=CDS;gene=SC7H1.20c;product=export protein;protein_id=NP_630067.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6519552	6519555	.	-	.	ID=id7825;Note=possible RBS upstream of SC7H1.20c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6519683	6519686	.	+	.	ID=id7826;Note=possible RBS upstream of SC7H1.21;gbkey=RBS
NC_003888.3	RefSeq	gene	6519692	6520303	.	+	.	ID=gene6014;Dbxref=GeneID:1101393;Name=SC7H1.21;gbkey=Gene;gene=SC7H1.21;gene_biotype=protein_coding;gene_synonym=SC7H1.21;locus_tag=SCO5951
NC_003888.3	RefSeq	CDS	6519692	6520303	.	+	0	ID=cds5895;Parent=gene6014;Dbxref=Genbank:NP_630068.1,GeneID:1101393;Name=NP_630068.1;Note=SC7H1.21%2C probable transcriptional regulator%2C len: 203 aa%3B similar to many eg. Streptomyces hygroscopicus TR:Q54288 (EMBL:X86780) regulator of antibiotic transport complexes (204 aa)%2C fasta scores%3B opt: 263 z-score: 351.4 E(): 2.2e-12%2C 33.7%25 identity in 196 aa overlap. Contains probable Helix-turn-helix motif at aa 41-61%2C Score 1399 (+3.95 SD) and Pfam match to entry tetR PF00440%2C Bacterial regulatory proteins%2C tetR family%2C score 23.60;gbkey=CDS;gene=SC7H1.21;product=transcriptional regulator;protein_id=NP_630068.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6519758	6519898	.	+	.	ID=id7827;Dbxref=GeneID:1101393;Note=Pfam match to entry tetR PF00440%2C Bacterial regulatory proteins%2C tetR family%2C from 1 to 48%2C score 23.60;gbkey=misc_feature;gene=SC7H1.21
NC_003888.3	RefSeq	ribosome_entry_site	6520537	6520540	.	+	.	ID=id7828;Note=possible RBS upstream of SC7H1.22;gbkey=RBS
NC_003888.3	RefSeq	gene	6520547	6521299	.	+	.	ID=gene6015;Dbxref=GeneID:1101394;Name=SC7H1.22;gbkey=Gene;gene=SC7H1.22;gene_biotype=protein_coding;gene_synonym=SC7H1.22;locus_tag=SCO5952
NC_003888.3	RefSeq	CDS	6520547	6521299	.	+	0	ID=cds5896;Parent=gene6015;Dbxref=Genbank:NP_630069.1,GeneID:1101394;Name=NP_630069.1;Note=SC7H1.22%2C membrane protein%2C len: 250 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7H1.22;product=hypothetical protein;protein_id=NP_630069.1;transl_table=11
NC_003888.3	RefSeq	gene	6521302	6524043	.	+	.	ID=gene6016;Dbxref=GeneID:1101395;Name=SC7H1.23;gbkey=Gene;gene=SC7H1.23;gene_biotype=protein_coding;gene_synonym=SC7H1.23;locus_tag=SCO5953
NC_003888.3	RefSeq	CDS	6521302	6524043	.	+	0	ID=cds5897;Parent=gene6016;Dbxref=Genbank:NP_630070.1,GeneID:1101395;Name=NP_630070.1;Note=SC7H1.23%2C membrane protein%2C len: 913 aa%3B weakly similar to many members of the eukaryotic beta-transducin family e.g. YA3A_SCHPO Q09715 hypothetical Trp-Asp repeats containing protein (614 aa)%2C fasta scores%3B opt: 139 z-score: 352.6 E(): 1.9e-12%2C 28.8%25 identity in 250 aa overlap. Contains possible membrane spanning domain around aa 200 and 3x Pfam match to entry G-beta PF00400%2C WD domain%2C G-beta repeats%2C scores%3B 27.34%2C 28.55 and 25.74;gbkey=CDS;gene=SC7H1.23;product=hypothetical protein;protein_id=NP_630070.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6522817	6522915	.	+	.	ID=id7829;Dbxref=GeneID:1101395;Note=Pfam match to entry G-beta PF00400%2C WD domain%2C G-beta repeats%2C from 1 to 34%2C score 27.34;gbkey=misc_feature;gene=SC7H1.23
NC_003888.3	RefSeq	sequence_feature	6522946	6523044	.	+	.	ID=id7830;Dbxref=GeneID:1101395;Note=Pfam match to entry G-beta PF00400%2C WD domain%2C G-beta repeats%2C from 1 to 34%2C score 28.55;gbkey=misc_feature;gene=SC7H1.23
NC_003888.3	RefSeq	sequence_feature	6523810	6523908	.	+	.	ID=id7831;Dbxref=GeneID:1101395;Note=Pfam match to entry G-beta PF00400%2C WD domain%2C G-beta repeats%2C from 1 to 34%2C score 25.74;gbkey=misc_feature;gene=SC7H1.23
NC_003888.3	RefSeq	ribosome_entry_site	6524134	6524137	.	+	.	ID=id7832;Note=possible RBS upstream of SC7H1.24;gbkey=RBS
NC_003888.3	RefSeq	gene	6524142	6526439	.	+	.	ID=gene6017;Dbxref=GeneID:1101396;Name=SC7H1.24;gbkey=Gene;gene=SC7H1.24;gene_biotype=protein_coding;gene_synonym=SC7H1.24;locus_tag=SCO5954
NC_003888.3	RefSeq	CDS	6524142	6526439	.	+	0	ID=cds5898;Parent=gene6017;Dbxref=Genbank:NP_630071.1,GeneID:1101396;Name=NP_630071.1;Note=SC7H1.24%2C probable chitinase (hypothetical protein)%2C len: 765 aa%3B similar to many eg. S. lividans CHIT_STRLI P36909 chitinase c precursor (ec 3.2.1.14) (619 aa)%2C fasta scores%3B opt: 292 z-score: 779.5 E(): 0%2C 35.1%25 identity in 752 aa overlap. Contains PS01095 Chitinases family 18 active site signature%2C and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC7H1.24;product=chitinase;protein_id=NP_630071.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6524861	6525068	.	+	.	ID=id7833;Dbxref=GeneID:1101396;Note=weak match to repeats from EM_BA:SL22894 U22894 Streptomyces lividans amplifiable element AUD1 (3863-4034%2C 4141-4348%2C 9515-9686%2C 9793-10000);gbkey=misc_feature;gene=SC7H1.24
NC_003888.3	RefSeq	sequence_feature	6525669	6525695	.	+	.	ID=id7834;Dbxref=GeneID:1101396;Note=PS01095 Chitinases family 18 active site signature;gbkey=misc_feature;gene=SC7H1.24
NC_003888.3	RefSeq	gene	6526506	6526940	.	-	.	ID=gene6018;Dbxref=GeneID:1101397;Name=SC7H1.25c;gbkey=Gene;gene=SC7H1.25c;gene_biotype=protein_coding;gene_synonym=SC7H1.25c;locus_tag=SCO5955
NC_003888.3	RefSeq	CDS	6526506	6526940	.	-	0	ID=cds5899;Parent=gene6018;Dbxref=Genbank:NP_630072.1,GeneID:1101397;Name=NP_630072.1;Note=SC7H1.25c%2C membrane protein%2C len: 144 aa%3B similar to Mycobacterium tuberculosis hypothetical protein O06193 (EMBL:Z95387) MTCY1A10.13 (141 aa)%2C fasta scores%3B opt: 459 z-score: 576.2 E(): 6.7e-25%2C 56.4%25 identity in 140 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7H1.25c;product=hypothetical protein;protein_id=NP_630072.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6526896	6526899	.	+	.	ID=id7835;Note=possible RBS upstream of SC7H1.26;gbkey=RBS
NC_003888.3	RefSeq	gene	6526903	6527715	.	+	.	ID=gene6019;Dbxref=GeneID:1101398;Name=SC7H1.26;gbkey=Gene;gene=SC7H1.26;gene_biotype=protein_coding;gene_synonym=SC7H1.26;locus_tag=SCO5956
NC_003888.3	RefSeq	CDS	6526903	6527715	.	+	0	ID=cds5900;Parent=gene6019;Dbxref=Genbank:NP_630073.1,GeneID:1101398;Name=NP_630073.1;Note=SC7H1.26%2C possible regulatory protein%2C len: 270 aa%3B contains probable Helix-turn-helix motif at aa 91-112%2C Score 1562 (+4.51 SD) and Pfam match to entry tetR PF00440%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SC7H1.26;product=regulatory protein;protein_id=NP_630073.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6526954	6526958	.	-	.	ID=id7836;Note=possible RBS upstream of SC7H1.25c;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	6527167	6527262	.	+	.	ID=id7837;Dbxref=GeneID:1101398;Note=Pfam match to entry tetR PF00440%2C Bacterial regulatory proteins%2C tetR family%2C from 17 to 48%2C score 25.03;gbkey=misc_feature;gene=SC7H1.26
NC_003888.3	RefSeq	ribosome_entry_site	6527861	6527864	.	+	.	ID=id7838;Note=possible RBS upstream of SC7H1.27;gbkey=RBS
NC_003888.3	RefSeq	gene	6527871	6529472	.	+	.	ID=gene6020;Dbxref=GeneID:1101399;Name=SC7H1.27;gbkey=Gene;gene=SC7H1.27;gene_biotype=protein_coding;gene_synonym=SC7H1.27;locus_tag=SCO5957
NC_003888.3	RefSeq	CDS	6527871	6529472	.	+	0	ID=cds5901;Parent=gene6020;Dbxref=Genbank:NP_630074.1,GeneID:1101399;Name=NP_630074.1;Note=SC7H1.27%2C probable transmembrane transport protein%2C len: 533 aa%3B similar to many eg. S. pristinaespiralis TR:Q54806 (EMBL:X84072) integral membrane protein (501 aa)%2C fasta scores%3B opt: 1088 z-score: 1144.1 E(): 0%2C 39.5%25 identity in 524 aa overlap. Also weakly similar to upstream ORF SC7H1.20c (E(): 4.2e-12%2C 28.6%25 identity in 461 aa overlap);gbkey=CDS;gene=SC7H1.27;product=transporter;protein_id=NP_630074.1;transl_table=11
NC_003888.3	RefSeq	gene	6529489	6530343	.	-	.	ID=gene6021;Dbxref=GeneID:1101400;Name=cbiO;gbkey=Gene;gene=cbiO;gene_biotype=protein_coding;gene_synonym=cbiO;locus_tag=SCO5958
NC_003888.3	RefSeq	CDS	6529489	6530343	.	-	0	ID=cds5902;Parent=gene6021;Dbxref=Genbank:NP_630075.1,GeneID:1101400;Name=NP_630075.1;Note=SC7H1.28c%2C cbiO%2C probable cobalt transport system ATP binding protein%2C len: 284 aa%3B similar to many eg. CBIO_SALTY Q05596 cobalt transport ATP-binding protein (271 aa)%2C fasta scores%3B opt: 567 z-score: 685.3 E(): 5.6e-31%2C 38.8%25 identity in 242 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C score 203.07;gbkey=CDS;gene=cbiO;product=cobalt transport system ATP binding protein;protein_id=NP_630075.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6529666	6530223	.	-	.	ID=id7839;Dbxref=GeneID:1101400;Note=Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C from 1 to 192%2C score 203.07;gbkey=misc_feature;gene=cbiO
NC_003888.3	RefSeq	sequence_feature	6530179	6530202	.	-	.	ID=id7840;Dbxref=GeneID:1101400;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cbiO
NC_003888.3	RefSeq	gene	6530340	6531089	.	-	.	ID=gene6022;Dbxref=GeneID:1101401;Name=cbiQ;gbkey=Gene;gene=cbiQ;gene_biotype=protein_coding;gene_synonym=cbiQ;locus_tag=SCO5959
NC_003888.3	RefSeq	CDS	6530340	6531089	.	-	0	ID=cds5903;Parent=gene6022;Dbxref=Genbank:NP_630076.1,GeneID:1101401;Name=NP_630076.1;Note=SC7H1.29c%2C cbiQ%2C probable cobalt transport integral membrane protein%2C len: 249 aa%3B similar to eg. CBIQ_SALTY Q05598 cobalt transport protein cbiq (225 aa)%2C fasta scores%3B opt: 182 z-score: 241.4 E(): 3e-06%2C 28.1%25 identity in 228 aa overlap;gbkey=CDS;gene=cbiQ;product=cobalt transport integral membrane protein;protein_id=NP_630076.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6530352	6530356	.	-	.	ID=id7841;Dbxref=GeneID:1101401;Note=possible RBS upstream of cbiO;gbkey=RBS;gene=cbiQ
NC_003888.3	RefSeq	gene	6531090	6531446	.	-	.	ID=gene6023;Dbxref=GeneID:1101402;Name=cbiN;gbkey=Gene;gene=cbiN;gene_biotype=protein_coding;gene_synonym=cbiN;locus_tag=SCO5960
NC_003888.3	RefSeq	CDS	6531090	6531446	.	-	0	ID=cds5904;Parent=gene6023;Dbxref=Genbank:NP_630077.1,GeneID:1101402;Name=NP_630077.1;Note=periplasmic cobalt binding component of the cobalt transport system;gbkey=CDS;gene=cbiN;product=cobalt transport protein CbiN;protein_id=NP_630077.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6531097	6531100	.	-	.	ID=id7842;Dbxref=GeneID:1101402;Note=possible RBS upstream of cbiQ;gbkey=RBS;gene=cbiN
NC_003888.3	RefSeq	gene	6531443	6532141	.	-	.	ID=gene6024;Dbxref=GeneID:1101403;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;gene_synonym=cbiM;locus_tag=SCO5961
NC_003888.3	RefSeq	CDS	6531443	6532141	.	-	0	ID=cds5905;Parent=gene6024;Dbxref=Genbank:NP_630078.2,GeneID:1101403;Name=NP_630078.2;Note=catalyzes the ATP-dependent transport of cobalt;gbkey=CDS;gene=cbiM;product=cobalt transport protein CbiM;protein_id=NP_630078.2;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6531451	6531455	.	-	.	ID=id7843;Dbxref=GeneID:1101403;Note=possible RBS upstream of cbiN;gbkey=RBS;gene=cbiM
NC_003888.3	RefSeq	sequence_feature	6531965	6532051	.	-	.	ID=id7844;Dbxref=GeneID:1101403;Note=PS00402 Binding-protein-dependent transport systems inner membrane component signature;gbkey=misc_feature;gene=cbiM
NC_003888.3	RefSeq	ribosome_entry_site	6532225	6532228	.	-	.	ID=id7845;Note=possible RBS upstream of cbiM;gbkey=RBS
NC_003888.3	RefSeq	gene	6532428	6533018	.	-	.	ID=gene6025;Dbxref=GeneID:1101404;Name=SC7H1.32c;gbkey=Gene;gene=SC7H1.32c;gene_biotype=protein_coding;gene_synonym=SC7H1.32c;locus_tag=SCO5962
NC_003888.3	RefSeq	CDS	6532428	6533018	.	-	0	ID=cds5906;Parent=gene6025;Dbxref=Genbank:NP_630079.1,GeneID:1101404;Name=NP_630079.1;Note=SC7H1.32c%2C probable transcriptional regulator%2C MerR family%3B len: 196 aa%3B similar to many eg. NOLA_BRASN P50330 nodulation protein nola. bradyrhizobium japonicum (237 aa)%2C fasta scores%3B opt: 282 z-score: 360.0 E(): 7.4e-13%2C 34.6%25 identity in 159 aa overlap. Contains PS00552 Bacterial regulatory proteins%2C merR family signature%2C Helix-turn-helix motif at aa 10-31%2C Score 1627 (+4.73 SD)%2C and Pfam match to entry merR PF00376%2C Bacterial regulatory proteins%2C merR family%2C score 92.85;gbkey=CDS;gene=SC7H1.32c;product=transcriptional regulator;protein_id=NP_630079.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6532794	6532988	.	-	.	ID=id7846;Dbxref=GeneID:1101404;Note=Pfam match to entry merR PF00376%2C Bacterial regulatory proteins%2C merR family%2C from 1 to 65%2C score 92.85;gbkey=misc_feature;gene=SC7H1.32c
NC_003888.3	RefSeq	sequence_feature	6532917	6532985	.	-	.	ID=id7847;Dbxref=GeneID:1101404;Note=PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=misc_feature;gene=SC7H1.32c
NC_003888.3	RefSeq	ribosome_entry_site	6533025	6533030	.	-	.	ID=id7848;Note=possible RBS upstream of SC7H1.32c;gbkey=RBS
NC_003888.3	RefSeq	gene	6533083	6533658	.	-	.	ID=gene6026;Dbxref=GeneID:1101405;Name=SC7H1.33c;gbkey=Gene;gene=SC7H1.33c;gene_biotype=protein_coding;gene_synonym=SC7H1.33c;locus_tag=SCO5963
NC_003888.3	RefSeq	CDS	6533083	6533658	.	-	0	ID=cds5907;Parent=gene6026;Dbxref=Genbank:NP_630080.1,GeneID:1101405;Name=NP_630080.1;Note=SC7H1.33c%2C possible membrane protein%2C len: 191%3B Contains PS00044 Bacterial regulatory proteins%2C lysR family signature%2C though this may be spurious;gbkey=CDS;gene=SC7H1.33c;product=hypothetical protein;protein_id=NP_630080.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6533176	6533253	.	-	.	ID=id7849;Dbxref=GeneID:1101405;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC7H1.33c
NC_003888.3	RefSeq	gene	6533655	6535013	.	-	.	ID=gene6027;Dbxref=GeneID:1101406;Name=SC7H1.34c;gbkey=Gene;gene=SC7H1.34c;gene_biotype=protein_coding;gene_synonym=SC7H1.34c;locus_tag=SCO5964
NC_003888.3	RefSeq	CDS	6533655	6535013	.	-	0	ID=cds5908;Parent=gene6027;Dbxref=Genbank:NP_630081.1,GeneID:1101406;Name=NP_630081.1;Note=SC7H1.34c%2C probable membrane protein%2C len: 452 aa%3B contains PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7H1.34c;product=hypothetical protein;protein_id=NP_630081.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6533666	6533669	.	-	.	ID=id7850;Dbxref=GeneID:1101406;Note=possible RBS upstream of SC7H1.33c;gbkey=RBS;gene=SC7H1.34c
NC_003888.3	RefSeq	sequence_feature	6534843	6534872	.	-	.	ID=id7851;Dbxref=GeneID:1101406;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC7H1.34c
NC_003888.3	RefSeq	ribosome_entry_site	6535288	6535292	.	+	.	ID=id7852;Note=possible RBS upstream of SC7H1.35;gbkey=RBS
NC_003888.3	RefSeq	gene	6535301	6535768	.	+	.	ID=gene6028;Dbxref=GeneID:1101407;Name=SC7H1.35;gbkey=Gene;gene=SC7H1.35;gene_biotype=protein_coding;gene_synonym=SC7H1.35;locus_tag=SCO5965
NC_003888.3	RefSeq	CDS	6535301	6535768	.	+	0	ID=cds5909;Parent=gene6028;Dbxref=Genbank:NP_630082.1,GeneID:1101407;Name=NP_630082.1;Note=SC7H1.35%2C possible integral membrane protein%2C len: 155 aa%3B weakly similar to hypothetival proteins from Archaeoglobus fulgidus and Mycobacterium leprae e.g. TR:G2650576 (EMBL:AE001101) AF0081 hypothetical 17.4 kd protein from Archaeoglobus fulgidus (156 aa)%2C fasta scores%3B opt: 129 z-score: 186.3 E(): 0.0035%2C 28.7%25 identity in 101 aa overlap and similar to TR:O86494 (EMBL:AL031232) Streptomyces coelicolor integral membrane protein SC10H5.02c%2C 151 aa%3B fasta scores: opt: 431 Z-score: 491.5 E(): 9.6e-20%3B 53.509%25 identity in 114 aa overlap. Contains possible hydrophobic membrane spannig regions;gbkey=CDS;gene=SC7H1.35;product=hypothetical protein;protein_id=NP_630082.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6535847	6535911	.	+	.	ID=id7853;Note=hairpin loop with 19 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6535912	6539055	.	-	.	ID=gene6029;Dbxref=GeneID:1101408;Name=SC7H1.36c;gbkey=Gene;gene=SC7H1.36c;gene_biotype=protein_coding;gene_synonym=SC7H1.36c,StBAC16H6.01c;locus_tag=SCO5966
NC_003888.3	RefSeq	CDS	6535912	6539055	.	-	0	ID=cds5910;Parent=gene6029;Dbxref=Genbank:NP_733680.1,GeneID:1101408;Name=NP_733680.1;Note=SCBAC16H6.01c%2C possible oxidase%2C len: >1032aa: similar to many of undefined function eg. TR:Q9EZK2 (EMBL:AF289509) oxidase YdiJ-like protein from Pseudomonas putida (1006 aa) fasta scores%3B opt: 880%2C Z-score: 889.5%2C 27.930%25 identity (31.672%25 ungapped) in 1024 aa overlap and TR:Q9F2Y0 (EMBL:AL392149) oxidoreductase SCD19.22 from Streptomyces coelicolor (951 aa) fasta scores%3B opt: 622%2C Z-score: 628.7%2C 49.698%25 identity (53.813%25 ungapped) in 994 aa overlap. Contains Prosite match to PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature%3B Pfam match to entry PF02913 FAD-oxidase_C%2C FAD linked oxidases%2C C-terminal domain and Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain.~SC7H1.36c%2C unknown%2C partial CDS%2C len: >81 aa;gbkey=CDS;gene=SC7H1.36c;product=oxidase;protein_id=NP_733680.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6537100	6537135	.	-	.	ID=id7854;Dbxref=GeneID:1101408;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SC7H1.36c
NC_003888.3	RefSeq	sequence_feature	6537454	6538251	.	-	.	ID=id7855;Dbxref=GeneID:1101408;Note=Pfam match to entry PF02913 FAD-oxidase_C%2C FAD linked oxidases%2C C-terminal domain%2C score 53.70%2C E-value 4e-12;gbkey=misc_feature;gene=SC7H1.36c
NC_003888.3	RefSeq	sequence_feature	6538255	6538980	.	-	.	ID=id7856;Dbxref=GeneID:1101408;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 144.80%2C E-value 1.5e-39;gbkey=misc_feature;gene=SC7H1.36c
NC_003888.3	RefSeq	gene	6539260	6539670	.	+	.	ID=gene6030;Dbxref=GeneID:1101409;Name=SCBAC16H6.02;gbkey=Gene;gene=SCBAC16H6.02;gene_biotype=protein_coding;gene_synonym=SCBAC16H6.02;locus_tag=SCO5967
NC_003888.3	RefSeq	CDS	6539260	6539670	.	+	0	ID=cds5911;Parent=gene6030;Dbxref=Genbank:NP_630083.1,GeneID:1101409;Name=NP_630083.1;Note=SCBAC16H6.02%2C conserved hypothetical protein%2C len: 136aa: similar to many eg. TR:Q9EWX7 (EMBL:AL445403) conserved hypothetical protein 2SCI34.02 from Streptomyces coelicolor (146 aa) fasta scores%3B opt: 257%2C Z-score: 325.1%2C 41.667%25 identity (43.269%25 ungapped) in 108 aa overlap.;gbkey=CDS;gene=SCBAC16H6.02;product=hypothetical protein;protein_id=NP_630083.1;transl_table=11
NC_003888.3	RefSeq	gene	6539766	6540974	.	+	.	ID=gene6031;Dbxref=GeneID:1101410;Name=StBAC16H6.03;gbkey=Gene;gene=StBAC16H6.03;gene_biotype=protein_coding;gene_synonym=StBAC16H6.03;locus_tag=SCO5968
NC_003888.3	RefSeq	CDS	6539766	6540974	.	+	0	ID=cds5912;Parent=gene6031;Dbxref=Genbank:NP_630084.1,GeneID:1101410;Name=NP_630084.1;Note=SCBAC16H6.03%2C possible bldA-regulated nucleotide binding protein%2C len: 402aa: no significant database matches. Contains TTA-encoded leucine close to N-terminus - possible target for bldA regulation. Also contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=StBAC16H6.03;product=bldA-regulated nucleotide binding protein;protein_id=NP_630084.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6539793	6539795	.	+	.	ID=id7857;Dbxref=GeneID:1101410;Note=TTA codon encoding leucine - possible target for bldA regulation.;gbkey=misc_feature;gene=StBAC16H6.03
NC_003888.3	RefSeq	sequence_feature	6539910	6539933	.	+	.	ID=id7858;Dbxref=GeneID:1101410;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=StBAC16H6.03
NC_003888.3	RefSeq	gene	6540971	6541324	.	+	.	ID=gene6032;Dbxref=GeneID:1101411;Name=StBAC16H6.04;gbkey=Gene;gene=StBAC16H6.04;gene_biotype=protein_coding;gene_synonym=StBAC16H6.04;locus_tag=SCO5969
NC_003888.3	RefSeq	CDS	6540971	6541324	.	+	0	ID=cds5913;Parent=gene6032;Dbxref=Genbank:NP_630085.1,GeneID:1101411;Name=NP_630085.1;Note=SCBAC16H6.04%2C conserved hypothetical protein%2C len: 402aa: similar to many eg. TR:Q9K5U1 (EMBL:AP001520) BH3997 protein from Bacillus halodurans (101 aa) fasta scores%3B opt: 282%2C Z-score: 358.7%2C 40.196%25 identity (42.268%25 ungapped) in 102 aa overlap.;gbkey=CDS;gene=StBAC16H6.04;product=hypothetical protein;protein_id=NP_630085.1;transl_table=11
NC_003888.3	RefSeq	gene	6541507	6541977	.	+	.	ID=gene6033;Dbxref=GeneID:1101412;Name=StBAC16H6.05;gbkey=Gene;gene=StBAC16H6.05;gene_biotype=protein_coding;gene_synonym=StBAC16H6.05;locus_tag=SCO5970
NC_003888.3	RefSeq	CDS	6541507	6541977	.	+	0	ID=cds5914;Parent=gene6033;Dbxref=Genbank:NP_630086.1,GeneID:1101412;Name=NP_630086.1;Note=SCBAC16H6.05%2C unknown%2C len: 156 aa: no significant database matches. Contains TTA-encoded leucine close to C-terminus.;gbkey=CDS;gene=StBAC16H6.05;product=hypothetical protein;protein_id=NP_630086.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6541954	6541956	.	+	.	ID=id7859;Dbxref=GeneID:1101412;Note=TTA codon encoding leucine - possible target for bldA regulation.;gbkey=misc_feature;gene=StBAC16H6.05
NC_003888.3	RefSeq	gene	6542306	6543229	.	+	.	ID=gene6034;Dbxref=GeneID:1101413;Name=StBAC16H6.06;gbkey=Gene;gene=StBAC16H6.06;gene_biotype=protein_coding;gene_synonym=StBAC16H6.06;locus_tag=SCO5971
NC_003888.3	RefSeq	CDS	6542306	6543229	.	+	0	ID=cds5915;Parent=gene6034;Dbxref=Genbank:NP_630087.1,GeneID:1101413;Name=NP_630087.1;Note=SCBAC16H6.06%2C conserved hypothetical protein%2C len: 307 aa: similar to many e.g. TR:AAK45058 (EMBL:AE006971) hypothetical protein from Mycobacterium tuberculosis (347 aa) fasta scores%3B opt: 482%2C Z-score: 543.4%2C 32.399%25 identity (37.011%25 ungapped) in 321 aa overlap. Contains Pfam match to entry PF00296 bac_luciferase%2C Bacterial luciferase;gbkey=CDS;gene=StBAC16H6.06;product=hypothetical protein;protein_id=NP_630087.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6542306	6543223	.	+	.	ID=id7860;Dbxref=GeneID:1101413;Note=Pfam match to entry PF00296 bac_luciferase%2C Bacterial luciferase%2C score -9.40%2C E-value 1.2e-06;gbkey=misc_feature;gene=StBAC16H6.06
NC_003888.3	RefSeq	gene	6543305	6544900	.	+	.	ID=gene6035;Dbxref=GeneID:1101414;Name=StBAC16H6.07;gbkey=Gene;gene=StBAC16H6.07;gene_biotype=protein_coding;gene_synonym=StBAC16H6.07;locus_tag=SCO5972
NC_003888.3	RefSeq	CDS	6543305	6544900	.	+	0	ID=cds5916;Parent=gene6035;Dbxref=Genbank:NP_630088.1,GeneID:1101414;Name=NP_630088.1;Note=SCBAC16H6.07%2C hypothetical protein with conserved region%2C len: 307aa: 300-500 aa region similar to many eg. TR:Q9V662 (EMBL:AE003823) CG12367 protein from Drosophila melanogaster (309 aa) fasta scores%3B opt: 294%2C Z-score: 338.2%2C 34.194%25 identity (37.324%25 ungapped) in 155 aa overlap.;gbkey=CDS;gene=StBAC16H6.07;product=3' terminal RNA ribose 2'-O-methyltransferase Hen1;protein_id=NP_630088.1;transl_table=11
NC_003888.3	RefSeq	gene	6544981	6547509	.	+	.	ID=gene6036;Dbxref=GeneID:1101415;Name=StBAC16H6.08;gbkey=Gene;gene=StBAC16H6.08;gene_biotype=protein_coding;gene_synonym=StBAC16H6.08;locus_tag=SCO5973
NC_003888.3	RefSeq	CDS	6544981	6547509	.	+	0	ID=cds5917;Parent=gene6036;Dbxref=Genbank:NP_630089.1,GeneID:1101415;Name=NP_630089.1;Note=SCBAC16H6.08%2C possible phosphatase%2C len: 842 aa: similar to TR:O69213 (EMBL:AJ224354) protein serine-threonine phosphatase from Anabaena sp. (strain PCC 7120) fasta scores%3B opt: 2173%2C Z-score: 2321.6%2C 52.962%25 identity (54.808%25 ungapped) in 861 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=StBAC16H6.08;product=phosphatase;protein_id=NP_630089.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6545032	6545055	.	+	.	ID=id7861;Dbxref=GeneID:1101415;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=StBAC16H6.08
NC_003888.3	RefSeq	gene	6547561	6548856	.	-	.	ID=gene6037;Dbxref=GeneID:1101416;Name=StBAC16H6.09c;gbkey=Gene;gene=StBAC16H6.09c;gene_biotype=protein_coding;gene_synonym=StBAC16H6.09c;locus_tag=SCO5974
NC_003888.3	RefSeq	CDS	6547561	6548856	.	-	0	ID=cds5918;Parent=gene6037;Dbxref=Genbank:NP_630090.1,GeneID:1101416;Name=NP_630090.1;Note=SCBAC16H6.09c%2C possible integral membrane ion exchanger%2C len: 431 aa: similar to many eg. TR:Q9LUN4 (EMBL:AB022219) Na+/H+ exchanging protein-like from Arabidopsis thaliana (800 aa) fasta scores%3B opt: 667%2C Z-score: 684.9%2C 34.048%25 identity (35.572%25 ungapped) in 420 aa overlap. Contains Pfam match to entry PF00999 Na_H_Exchanger%2C Sodium/hydrogen exchanger family and multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=StBAC16H6.09c;product=integral membrane ion exchanger;protein_id=NP_630090.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6547597	6548838	.	-	.	ID=id7862;Dbxref=GeneID:1101416;Note=Pfam match to entry PF00999 Na_H_Exchanger%2C Sodium/hydrogen exchanger family%2C score 10.80%2C E-value 2.4e-05;gbkey=misc_feature;gene=StBAC16H6.09c
NC_003888.3	RefSeq	gene	6549048	6550304	.	+	.	ID=gene6038;Dbxref=GeneID:1101417;Name=arcA2;gbkey=Gene;gene=arcA2;gene_biotype=protein_coding;gene_synonym=arcA2,StBAC16H6.10;locus_tag=SCO5975
NC_003888.3	RefSeq	CDS	6549048	6550304	.	+	0	ID=cds5919;Parent=gene6038;Dbxref=Genbank:NP_630091.1,GeneID:1101417;Name=NP_630091.1;Note=SCBAC16H6.10%2C arcA2%2C arginine deiminase%2C len: 418 aa: similar to many e.g. SW:Q9RJN1 (ARCA_STRCO) arginine deaminase ArcA SCF55.37 from Streptomyces coelicolor (420 aa) fasta scores%3B opt: 1124%2C Z-score: 1310.8%2C 43.350%25 identity (43.781%25 ungapped) in 406 aa overlap and SW:O31017 (ARCA_RHIET) arginine deaminase from Rhizobium etli (409 aa) fasta scores%3B opt: 1153%2C Z-score: 1344.7%2C 45.854%25 identity (47.000%25 ungapped) in 410 aa overlap. Contains Pfam match to entry PF02726 Arg_deiminase%2C Arginine deiminase.;gbkey=CDS;gene=arcA2;product=arginine deiminase;protein_id=NP_630091.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6549714	6550295	.	+	.	ID=id7863;Dbxref=GeneID:1101417;Note=Pfam match to entry PF02726 Arg_deiminase%2C Arginine deiminase%2C score 312.40%2C E-value 5.4e-90;gbkey=misc_feature;gene=arcA2
NC_003888.3	RefSeq	gene	6550399	6551406	.	+	.	ID=gene6039;Dbxref=GeneID:1101418;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;gene_synonym=arcB,StBAC16H6.11;locus_tag=SCO5976
NC_003888.3	RefSeq	CDS	6550399	6551406	.	+	0	ID=cds5920;Parent=gene6039;Dbxref=Genbank:NP_630092.1,GeneID:1101418;Name=NP_630092.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;gene=arcB;product=ornithine carbamoyltransferase;protein_id=NP_630092.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6550429	6550857	.	+	.	ID=id7864;Dbxref=GeneID:1101418;Note=Pfam match to entry PF02729 OTCace_N%2C Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%2C score 250.50%2C E-value 2.2e-71;gbkey=misc_feature;gene=arcB
NC_003888.3	RefSeq	sequence_feature	6550564	6550587	.	+	.	ID=id7865;Dbxref=GeneID:1101418;Note=PS00097 Aspartate and ornithine carbamoyltransferases signature;gbkey=misc_feature;gene=arcB
NC_003888.3	RefSeq	sequence_feature	6550867	6551400	.	+	.	ID=id7866;Dbxref=GeneID:1101418;Note=Pfam match to entry PF00185 OTCace%2C Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain%2C score 289.40%2C E-value 1.3e-84;gbkey=misc_feature;gene=arcB
NC_003888.3	RefSeq	gene	6551536	6552975	.	+	.	ID=gene6040;Dbxref=GeneID:1101419;Name=StBAC16H6.12;gbkey=Gene;gene=StBAC16H6.12;gene_biotype=protein_coding;gene_synonym=StBAC16H6.12;locus_tag=SCO5977
NC_003888.3	RefSeq	CDS	6551536	6552975	.	+	0	ID=cds5921;Parent=gene6040;Dbxref=Genbank:NP_630093.1,GeneID:1101419;Name=NP_630093.1;Note=SCBAC16H6.12%2C possible amino acid permease%2C len: 479aa: similar to many eg. SW:O43246 (CTR4_HUMAN) cationic amino acid permease from Homo sapiens (636 aa) fasta scores%3B opt: 704%2C Z-score: 760.9%2C 33.679%25 identity (34.946%25 ungapped) in 386 aa overlap and TR:Q9L100 (EMBL:AL159139) amino acid permease SCL6.16c from Streptomyces coelicolor (496 aa) fasta scores%3B opt: 1575%2C Z-score: 1699.3%2C 53.377%25 identity (53.493%25 ungapped) in 459 aa overlap. Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=StBAC16H6.12;product=amino acid permease;protein_id=NP_630093.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6551608	6552909	.	+	.	ID=id7867;Dbxref=GeneID:1101419;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -58.70%2C E-value 2.1e-10;gbkey=misc_feature;gene=StBAC16H6.12
NC_003888.3	RefSeq	gene	6552935	6553420	.	-	.	ID=gene6041;Dbxref=GeneID:1101420;Name=StBAC16H6.13c;gbkey=Gene;gene=StBAC16H6.13c;gene_biotype=protein_coding;gene_synonym=StBAC16H6.13c;locus_tag=SCO5978
NC_003888.3	RefSeq	CDS	6552935	6553420	.	-	0	ID=cds5922;Parent=gene6041;Dbxref=Genbank:NP_630094.1,GeneID:1101420;Name=NP_630094.1;Note=SCBAC16H6.13c%2C conserved hypothetical protein%2C len: 161aa: similar to many others in Streptomyces coelicolor eg. TR:Q9X7Q5 (EMBL:AL049587) hypothetical protein SC5F2A.32 (161 aa) fasta scores%3B opt: 222%2C Z-score: 255.7%2C 32.515%25 identity (36.054%25 ungapped) in 163 aa overlap. Also similar to TR:O69204 (EMBL:U33059) hypothetical protein from Actinosynnema pretiosum (subsp. auranticum) (144 aa) fasta scores%3B opt: 227%2C Z-score: 261.8%2C 39.735%25 identity (45.113%25 ungapped) in 151 aa overlap. Contains Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase.;gbkey=CDS;gene=StBAC16H6.13c;product=hypothetical protein;protein_id=NP_630094.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6553124	6553258	.	-	.	ID=id7868;Dbxref=GeneID:1101420;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase%2C score 14.30%2C E-value 0.014;gbkey=misc_feature;gene=StBAC16H6.13c
NC_003888.3	RefSeq	gene	6553552	6554379	.	+	.	ID=gene6042;Dbxref=GeneID:1101421;Name=StBAC16H6.14;gbkey=Gene;gene=StBAC16H6.14;gene_biotype=protein_coding;gene_synonym=StBAC16H6.14;locus_tag=SCO5979
NC_003888.3	RefSeq	CDS	6553552	6554379	.	+	0	ID=cds5923;Parent=gene6042;Dbxref=Genbank:NP_630095.1,GeneID:1101421;Name=NP_630095.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;gene=StBAC16H6.14;product=enoyl-CoA hydratase;protein_id=NP_630095.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6553627	6554148	.	+	.	ID=id7869;Dbxref=GeneID:1101421;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 118.00%2C E-value 1.8e-31;gbkey=misc_feature;gene=StBAC16H6.14
NC_003888.3	RefSeq	sequence_feature	6553894	6553956	.	+	.	ID=id7870;Dbxref=GeneID:1101421;Note=PS00166 Enoyl-CoA hydratase/isomerase signature;gbkey=misc_feature;gene=StBAC16H6.14
NC_003888.3	RefSeq	gene	6554384	6556789	.	+	.	ID=gene6043;Dbxref=GeneID:1101422;Name=StBAC16H6.15;gbkey=Gene;gene=StBAC16H6.15;gene_biotype=protein_coding;gene_synonym=StBAC16H6.15;locus_tag=SCO5980
NC_003888.3	RefSeq	CDS	6554384	6556789	.	+	0	ID=cds5924;Parent=gene6043;Dbxref=Genbank:NP_630096.1,GeneID:1101422;Name=NP_630096.1;Note=catalyzes the conversion of salicylyl-CoA to gentisyl-CoA;gbkey=CDS;gene=StBAC16H6.15;product=salicylyl-CoA 5-hydroxylase;protein_id=NP_630096.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6554891	6555475	.	+	.	ID=id7871;Dbxref=GeneID:1101422;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 76.50%2C E-value 5.4e-19;gbkey=misc_feature;gene=StBAC16H6.15
NC_003888.3	RefSeq	sequence_feature	6555053	6555085	.	+	.	ID=id7872;Dbxref=GeneID:1101422;Note=PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature;gbkey=misc_feature;gene=StBAC16H6.15
NC_003888.3	RefSeq	sequence_feature	6555650	6556672	.	+	.	ID=id7873;Dbxref=GeneID:1101422;Note=Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family%2C score 257.90%2C E-value 1.3e-73;gbkey=misc_feature;gene=StBAC16H6.15
NC_003888.3	RefSeq	sequence_feature	6556169	6556207	.	+	.	ID=id7874;Dbxref=GeneID:1101422;Note=PS00383 Tyrosine specific protein phosphatases active site;gbkey=misc_feature;gene=StBAC16H6.15
NC_003888.3	RefSeq	gene	6556777	6557688	.	-	.	ID=gene6044;Dbxref=GeneID:1101423;Name=StBAC16H6.16c;gbkey=Gene;gene=StBAC16H6.16c;gene_biotype=protein_coding;gene_synonym=StBAC16H6.16c;locus_tag=SCO5981
NC_003888.3	RefSeq	CDS	6556777	6557688	.	-	0	ID=cds5925;Parent=gene6044;Dbxref=Genbank:NP_630097.1,GeneID:1101423;Name=NP_630097.1;Note=SCBAC16H6.16c%2C unknown%2C len: 303 aa: contains weak Pfam match to entry PF00685 Sulfotransfer%2C Sulfotransferases;gbkey=CDS;gene=StBAC16H6.16c;product=hypothetical protein;protein_id=NP_630097.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6556795	6557556	.	-	.	ID=id7875;Dbxref=GeneID:1101423;Note=Pfam match to entry PF00685 Sulfotransfer%2C Sulfotransferases%2C score -78.50%2C E-value 0.1;gbkey=misc_feature;gene=StBAC16H6.16c
NC_003888.3	RefSeq	gene	6557772	6558617	.	-	.	ID=gene6045;Dbxref=GeneID:1101424;Name=StBAC16H6.17c;gbkey=Gene;gene=StBAC16H6.17c;gene_biotype=protein_coding;gene_synonym=StBAC16H6.17c;locus_tag=SCO5982
NC_003888.3	RefSeq	CDS	6557772	6558617	.	-	0	ID=cds5926;Parent=gene6045;Dbxref=Genbank:NP_630098.1,GeneID:1101424;Name=NP_630098.1;Note=SCBAC16H6.17c%2C possible regulator%2C len: 281 aa: weakly similar to SW:P76086 (PAAX_ECOLI) phenylacetic acid degradation repressor protein from Escherichia coli (316 aa) fasta scores%3B opt: 266%2C Z-score: 305.3%2C 26.071%25 identity (28.077%25 ungapped) in 280 aa overlap.;gbkey=CDS;gene=StBAC16H6.17c;product=regulator;protein_id=NP_630098.1;transl_table=11
NC_003888.3	RefSeq	gene	6558619	6560310	.	-	.	ID=gene6046;Dbxref=GeneID:1101425;Name=StBAC16H6.18c;gbkey=Gene;gene=StBAC16H6.18c;gene_biotype=protein_coding;gene_synonym=StBAC16H6.18c;locus_tag=SCO5983
NC_003888.3	RefSeq	CDS	6558619	6560310	.	-	0	ID=cds5927;Parent=gene6046;Dbxref=Genbank:NP_630099.1,GeneID:1101425;Name=NP_630099.1;Note=SCBAC16H6.18c%2C possible fatty acid-CoA ligase%2C len: 563 aa: similar to many e.g. TR:Q53005 (EMBL:U02033) 4-hydroxybenzoate-coenzyme A ligase rom Rhodopseudomonas palustris (539 aa) fasta scores%3B opt: 758%2C Z-score: 808.8%2C 33.747%25 identity (35.667%25 ungapped) in 483 aa overlap and TR:BAB48174 (EMBL:AP002995) probable acid-CoA ligase from Rhizobium loti (541 aa) fasta scores%3B opt: 1793%2C Z-score: 1909.7%2C 51.866%25 identity (53.565%25 ungapped) in 536 aa overlap. Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and Prosite match to PS00455  AMP-binding domain signature.;gbkey=CDS;gene=StBAC16H6.18c;product=fatty acid-CoA ligase;protein_id=NP_630099.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6558901	6560058	.	-	.	ID=id7876;Dbxref=GeneID:1101425;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 314.00%2C E-value 1.8e-90;gbkey=misc_feature;gene=StBAC16H6.18c
NC_003888.3	RefSeq	sequence_feature	6559666	6559701	.	-	.	ID=id7877;Dbxref=GeneID:1101425;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=StBAC16H6.18c
NC_003888.3	RefSeq	gene	6560442	6561617	.	+	.	ID=gene6047;Dbxref=GeneID:1101426;Name=StBAC16H6.19;gbkey=Gene;gene=StBAC16H6.19;gene_biotype=protein_coding;gene_synonym=StBAC16H6.19;locus_tag=SCO5984
NC_003888.3	RefSeq	CDS	6560442	6561617	.	+	0	ID=cds5928;Parent=gene6047;Dbxref=Genbank:NP_630100.1,GeneID:1101426;Name=NP_630100.1;Note=SCBAC16H6.19%2C possible acyl-CoA dehydrogenase%2C len: 391aa: similar to many eg. SW:P16219 (ACDS_HUMAN) acyl-CoA dehydrogenase from Homo sapiens (412 aa) fasta scores%3B opt: 676%2C Z-score: 741.3%2C 35.121%25 identity (37.006%25 ungapped) in 373 aa overlap and SW:P96879 (ACDP_MYCTU) probable acyl-CoA dehydrogenase from Mycobacterium tuberculosis (389 aa) fasta scores%3B opt: 735%2C Z-score: 805.9%2C 35.676%25 identity (37.394%25 ungapped) in 370 aa overlap. Contains Pfam match to entry PF02770 Acyl-CoA_dh_M%2C Acyl-CoA dehydrogenase%2C middle domain%3B Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C C-terminal domain and Prosite match to PS00072 Acyl-CoA dehydrogenases signature 1.;gbkey=CDS;gene=StBAC16H6.19;product=acyl-CoA dehydrogenase;protein_id=NP_630100.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6560787	6561017	.	+	.	ID=id7878;Dbxref=GeneID:1101426;Note=Pfam match to entry PF02770 Acyl-CoA_dh_M%2C Acyl-CoA dehydrogenase%2C middle domain%2C score 96.60%2C E-value 4e-26;gbkey=misc_feature;gene=StBAC16H6.19
NC_003888.3	RefSeq	sequence_feature	6560787	6560825	.	+	.	ID=id7879;Dbxref=GeneID:1101426;Note=PS00072 Acyl-CoA dehydrogenases signature 1;gbkey=misc_feature;gene=StBAC16H6.19
NC_003888.3	RefSeq	sequence_feature	6561111	6561563	.	+	.	ID=id7880;Dbxref=GeneID:1101426;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C C-terminal domain%2C score 144.90%2C E-value 1.4e-39;gbkey=misc_feature;gene=StBAC16H6.19
NC_003888.3	RefSeq	gene	6561614	6562012	.	+	.	ID=gene6048;Dbxref=GeneID:1101427;Name=StBAC16H6.20;gbkey=Gene;gene=StBAC16H6.20;gene_biotype=protein_coding;gene_synonym=StBAC16H6.20;locus_tag=SCO5985
NC_003888.3	RefSeq	CDS	6561614	6562012	.	+	0	ID=cds5929;Parent=gene6048;Dbxref=Genbank:NP_630101.1,GeneID:1101427;Name=NP_630101.1;Note=SCBAC16H6.20%2C conserved hypothetical protein%2C len: 132aa: similar to many eg. TR:BAB51882 (EMBL:AP003006) MLL5429 protein from Rhizobium loti (137 aa) fasta scores%3B opt: 271%2C Z-score: 331.4%2C 34.884%25 identity (35.156%25 ungapped) in 129 aa overlap. Contains Pfam match to entry PF01042 UPF0076%2C YjgF family.;gbkey=CDS;gene=StBAC16H6.20;product=hypothetical protein;protein_id=NP_630101.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6561638	6562006	.	+	.	ID=id7881;Dbxref=GeneID:1101427;Note=Pfam match to entry PF01042 UPF0076%2C YjgF family%2C score 61.20%2C E-value 2.2e-14;gbkey=misc_feature;gene=StBAC16H6.20
NC_003888.3	RefSeq	gene	6562040	6562867	.	+	.	ID=gene6049;Dbxref=GeneID:1101428;Name=StBAC16H6.21;gbkey=Gene;gene=StBAC16H6.21;gene_biotype=protein_coding;gene_synonym=StBAC16H6.21;locus_tag=SCO5986
NC_003888.3	RefSeq	CDS	6562040	6562867	.	+	0	ID=cds5930;Parent=gene6049;Dbxref=Genbank:NP_630102.1,GeneID:1101428;Name=NP_630102.1;Note=SCBAC16H6.21%2C possible oxidoreductase%2C len: 275aa: similar to many eg. TR:O53622 (EMBL:AL021428) oxidoreductase from Mycobacterium tuberculosis (276 aa) fasta scores%3B opt: 521%2C Z-score: 601.4%2C 36.364%25 identity (38.314%25 ungapped) in 275 aa overlap and TR:Q53042 (EMBL:AF060871) haloalkane dehalogenase from Rhodococcus rhodochrous (293 aa) fasta scores%3B opt: 249%2C Z-score: 291.2%2C 28.417%25 identity (31.102%25 ungapped) in 278 aa overlap.;gbkey=CDS;gene=StBAC16H6.21;product=oxidoreductase;protein_id=NP_630102.1;transl_table=11
NC_003888.3	RefSeq	gene	6562884	6563093	.	-	.	ID=gene6050;Dbxref=GeneID:1101429;Name=StBAC16H6.21c;gbkey=Gene;gene=StBAC16H6.21c;gene_biotype=protein_coding;gene_synonym=StBAC16H6.21c;locus_tag=SCO5987
NC_003888.3	RefSeq	CDS	6562884	6563093	.	-	0	ID=cds5931;Parent=gene6050;Dbxref=Genbank:NP_630103.1,GeneID:1101429;Name=NP_630103.1;Note=SCBAC16H6.21c%2C conserved hypothetical protein%2C len: 69aa: similar to two others in Streptomyces coelicolor - TR:Q9AK87 (EMBL:AL583943) SC10A9.17 (chromosomal) (67 aa) fasta scores%3B opt: 276%2C Z-score: 372.9%2C 60.317%25 identity (63.333%25 ungapped) in 63 aa overlap and TR:Q9AD54 (EMBL:AL590463) SCP1.96 (plasmid) (79 aa) fasta scores%3B opt: 274%2C Z-score: 369.2%2C 59.322%25 identity (61.404%25 ungapped) in 59 aa overlap.;gbkey=CDS;gene=StBAC16H6.21c;product=hypothetical protein;protein_id=NP_630103.1;transl_table=11
NC_003888.3	RefSeq	gene	6563335	6563778	.	+	.	ID=gene6051;Dbxref=GeneID:1101430;Name=StBAC16H6.23;gbkey=Gene;gene=StBAC16H6.23;gene_biotype=protein_coding;gene_synonym=StBAC16H6.23;locus_tag=SCO5988
NC_003888.3	RefSeq	CDS	6563335	6563778	.	+	0	ID=cds5932;Parent=gene6051;Dbxref=Genbank:NP_630104.1,GeneID:1101430;Name=NP_630104.1;Note=SCBAC16H6.23%2C conserved hypothetical protein%2C len: 147aa: weakly similar to others eg. TR:Q9RSG5 (EMBL:AE002049) hypothetical protein from Deinococcus radiodurans (255 aa) fasta scores%3B opt: 118%2C Z-score: 140.3%2C 28.873%25 identity (32.540%25 ungapped) in 142 aa overlap.;gbkey=CDS;gene=StBAC16H6.23;product=hypothetical protein;protein_id=NP_630104.1;transl_table=11
NC_003888.3	RefSeq	gene	6563897	6564781	.	-	.	ID=gene6052;Dbxref=GeneID:1101431;Name=StBAC16H6.24c;gbkey=Gene;gene=StBAC16H6.24c;gene_biotype=protein_coding;gene_synonym=StBAC16H6.24c;locus_tag=SCO5989
NC_003888.3	RefSeq	CDS	6563897	6564781	.	-	0	ID=cds5933;Parent=gene6052;Dbxref=Genbank:NP_630105.1,GeneID:1101431;Name=NP_630105.1;Note=SCBAC16H6.24c%2C possible integral membrane protein%2C len: 294aa: similar to TR:Q9K400 (EMBL:AL359949) integral membrane protein 2SCG61.15 from Streptomyces coelicolor (322 aa) fasta scores%3B opt: 900%2C Z-score: 931.3%2C 52.597%25 identity (59.124%25 ungapped) in 308 aa overlap. Contains possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=StBAC16H6.24c;product=hypothetical protein;protein_id=NP_630105.1;transl_table=11
NC_003888.3	RefSeq	gene	6564792	6565028	.	-	.	ID=gene6053;Dbxref=GeneID:1101432;Name=StBAC16H6.25c;gbkey=Gene;gene=StBAC16H6.25c;gene_biotype=protein_coding;gene_synonym=StBAC16H6.25c;locus_tag=SCO5990
NC_003888.3	RefSeq	CDS	6564792	6565028	.	-	0	ID=cds5934;Parent=gene6053;Dbxref=Genbank:NP_630106.1,GeneID:1101432;Name=NP_630106.1;Note=SCBAC16H6.25c%2C unknown%2C len: 78 aa: no significant database matches.;gbkey=CDS;gene=StBAC16H6.25c;product=hypothetical protein;protein_id=NP_630106.1;transl_table=11
NC_003888.3	RefSeq	gene	6565263	6565649	.	+	.	ID=gene6054;Dbxref=GeneID:1101433;Name=StBAC16H6.26;gbkey=Gene;gene=StBAC16H6.26;gene_biotype=protein_coding;gene_synonym=StBAC16H6.26;locus_tag=SCO5991
NC_003888.3	RefSeq	CDS	6565263	6565649	.	+	0	ID=cds5935;Parent=gene6054;Dbxref=Genbank:NP_630107.1,GeneID:1101433;Name=NP_630107.1;Note=SCBAC16H6.26%2C possible hypothetical protein%2C len: 128aa: no significant database matches. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=StBAC16H6.26;product=hypothetical protein;protein_id=NP_630107.1;transl_table=11
NC_003888.3	RefSeq	gene	6565701	6566195	.	+	.	ID=gene6055;Dbxref=GeneID:1101434;Name=StBAC16H6.27;gbkey=Gene;gene=StBAC16H6.27;gene_biotype=protein_coding;gene_synonym=StBAC16H6.27;locus_tag=SCO5992
NC_003888.3	RefSeq	CDS	6565701	6566195	.	+	0	ID=cds5936;Parent=gene6055;Dbxref=Genbank:NP_630108.1,GeneID:1101434;Name=NP_630108.1;Note=SCBAC16H6.27%2C possible integral membrane protein%2C len: 164aa: no significant database matches. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=StBAC16H6.27;product=hypothetical protein;protein_id=NP_630108.1;transl_table=11
NC_003888.3	RefSeq	gene	6566262	6567074	.	+	.	ID=gene6056;Dbxref=GeneID:1101435;Name=StBAC16H6.28;gbkey=Gene;gene=StBAC16H6.28;gene_biotype=protein_coding;gene_synonym=StBAC16H6.28;locus_tag=SCO5993
NC_003888.3	RefSeq	CDS	6566262	6567074	.	+	0	ID=cds5937;Parent=gene6056;Dbxref=Genbank:NP_630109.1,GeneID:1101435;Name=NP_630109.1;Note=SCBAC16H6.28%2C possible membrane protein%2C len: 270aa: weakly similar to TR:BAB53967 (EMBL:AP003012) MLR7525 protein from Rhizobium loti (250 aa) fasta scores%3B opt: 340%2C Z-score: 379.4%2C 28.400%25 identity (30.603%25 ungapped) in 250 aa overlap. Contains a possible membrane-spanning hydrophobic region;gbkey=CDS;gene=StBAC16H6.28;product=hypothetical protein;protein_id=NP_630109.1;transl_table=11
NC_003888.3	RefSeq	gene	6567071	6567973	.	+	.	ID=gene6057;Dbxref=GeneID:1101436;Name=StBAC16H6.29;gbkey=Gene;gene=StBAC16H6.29;gene_biotype=protein_coding;gene_synonym=StBAC16H6.29;locus_tag=SCO5994
NC_003888.3	RefSeq	CDS	6567071	6567973	.	+	0	ID=cds5938;Parent=gene6057;Dbxref=Genbank:NP_630110.1,GeneID:1101436;Name=NP_630110.1;Note=SCBAC16H6.29%2C possible integral membrane cytochrome biogenesis protein%2C len: 300 aa%3B similar to TR:Q9R6T1 (EMBL:AF079137) CcdA from Synechococcus sp. (strain PCC 6301) (252 aa) fasta scores%3B opt: 245%2C Z-score: 273.8%2C 30.208%25 identity (33.721%25 ungapped) in 192 aa overlap. Contains Pfam match to entry PF02683 DsbD%2C Cytochrome C biogenesis protein transmembrane region and possible membrane-spanning hydrophobic regions;gbkey=CDS;gene=StBAC16H6.29;product=integral membrane cytochrome biogenesis protein;protein_id=NP_630110.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6567095	6567718	.	+	.	ID=id7882;Dbxref=GeneID:1101436;Note=Pfam match to entry PF02683 DsbD%2C Cytochrome C biogenesis protein transmembrane region%2C score 40.10%2C E-value 5.1e-08;gbkey=misc_feature;gene=StBAC16H6.29
NC_003888.3	RefSeq	gene	6568057	6568779	.	+	.	ID=gene6058;Dbxref=GeneID:1101437;Name=StBAC16H6.30;gbkey=Gene;gene=StBAC16H6.30;gene_biotype=protein_coding;gene_synonym=StBAC16H6.30;locus_tag=SCO5995
NC_003888.3	RefSeq	CDS	6568057	6568779	.	+	0	ID=cds5939;Parent=gene6058;Dbxref=Genbank:NP_630111.1,GeneID:1101437;Name=NP_630111.1;Note=SCBAC16H6.30%2C possible hypothetical protein%2C len: 240aa: similar to TR:Q9KYR3 (EMBL:AL355913) lipoprotein SC5H4.26c from Streptomyces coelicolor (187 aa) fasta scores%3B opt: 133%2C Z-score: 148.7%2C 31.783%25 identity (36.607%25 ungapped) in 129 aa overlap. Contains a possible N-terminal signal sequence. Also contains TTA leucine codon. Possible target for bldA regulation.;gbkey=CDS;gene=StBAC16H6.30;product=hypothetical protein;protein_id=NP_630111.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6568084	6568086	.	+	.	ID=id7883;Dbxref=GeneID:1101437;Note=TTA leucine codon. Possible target for bldA regulation.;gbkey=misc_feature;gene=StBAC16H6.30
NC_003888.3	RefSeq	gene	6568779	6571592	.	+	.	ID=gene6059;Dbxref=GeneID:1101438;Name=StBAC16H6.31;gbkey=Gene;gene=StBAC16H6.31;gene_biotype=protein_coding;gene_synonym=StBAC16H6.31;locus_tag=SCO5996
NC_003888.3	RefSeq	CDS	6568779	6571592	.	+	0	ID=cds5940;Parent=gene6059;Dbxref=Genbank:NP_630112.1,GeneID:1101438;Name=NP_630112.1;Note=SCBAC16H6.31%2C possible membrane protein%2C len: 937 aa: similar to TR:O54182 (EMBL:AL021411) hypothetical protein SC7H1.23 from Streptomyces coelicolor (913 aa) fasta scores%3B opt: 1128%2C Z-score: 1138.9%2C 29.418%25 identity (31.524%25 ungapped) in 928 aa overlap. C-terminal region contains 13 Pfam matches to entry PF00400 WD40%2C WD domain%2C G-beta repeat%3B 5 Prosite matches to PS00678 Trp-Asp (WD) repeats signature and a Prosite match to PS00626 Regulator of chromosome condensation (RCC1) signature 2;gbkey=CDS;gene=StBAC16H6.31;product=hypothetical protein;protein_id=NP_630112.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6569703	6569813	.	+	.	ID=id7884;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 31.20%2C E-value 2.4e-05;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6569832	6569942	.	+	.	ID=id7885;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 30.30%2C E-value 4.4e-05;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6569901	6569945	.	+	.	ID=id7886;Dbxref=GeneID:1101438;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6569961	6570077	.	+	.	ID=id7887;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 9.80%2C E-value 19;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6570096	6570197	.	+	.	ID=id7888;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 12.20%2C E-value 6.3;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6570216	6570326	.	+	.	ID=id7889;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 14.30%2C E-value 2.5;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6570354	6570461	.	+	.	ID=id7890;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 20.60%2C E-value 0.038;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6570480	6570590	.	+	.	ID=id7891;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 34.60%2C E-value 2.3e-06;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6570549	6570593	.	+	.	ID=id7892;Dbxref=GeneID:1101438;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6570612	6570713	.	+	.	ID=id7893;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 4.80%2C E-value 1.8e+02;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6570855	6570962	.	+	.	ID=id7894;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 18.40%2C E-value 0.16;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6570978	6571082	.	+	.	ID=id7895;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 10.10%2C E-value 16;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6571041	6571085	.	+	.	ID=id7896;Dbxref=GeneID:1101438;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6571101	6571211	.	+	.	ID=id7897;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 38.00%2C E-value 2.2e-07;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6571170	6571214	.	+	.	ID=id7898;Dbxref=GeneID:1101438;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6571230	6571340	.	+	.	ID=id7899;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 30.30%2C E-value 4.3e-05;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6571299	6571343	.	+	.	ID=id7900;Dbxref=GeneID:1101438;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6571302	6571334	.	+	.	ID=id7901;Dbxref=GeneID:1101438;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	sequence_feature	6571359	6571469	.	+	.	ID=id7902;Dbxref=GeneID:1101438;Note=Pfam match to entry PF00400 WD40%2C WD domain%2C G-beta repeat%2C score 15.60%2C E-value 1.2;gbkey=misc_feature;gene=StBAC16H6.31
NC_003888.3	RefSeq	gene	6572032	6572550	.	+	.	ID=gene6060;Dbxref=GeneID:1101439;Name=StBAC16H6.32;gbkey=Gene;gene=StBAC16H6.32;gene_biotype=protein_coding;gene_synonym=StBAC16H6.32;locus_tag=SCO5997
NC_003888.3	RefSeq	CDS	6572032	6572550	.	+	0	ID=cds5941;Parent=gene6060;Dbxref=Genbank:NP_630113.1,GeneID:1101439;Name=NP_630113.1;Note=SCBAC16H6.32%2C possible hypothetical protein%2C len: 172aa: similar to others from Streptomyces coelicolor eg. TR:Q9AJX2 (EMBL:AL513407) hypothetical protein SCI33.04 (244 aa) fasta scores%3B opt: 622%2C Z-score: 669.7%2C 61.111%25 identity (62.658%25 ungapped) in 162 aa overlap. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=StBAC16H6.32;product=hypothetical protein;protein_id=NP_630113.1;transl_table=11
NC_003888.3	RefSeq	gene	6573186	6574715	.	-	.	ID=gene6061;Dbxref=GeneID:1101440;Name=murA2;gbkey=Gene;gene=murA2;gene_biotype=protein_coding;gene_synonym=murA2,SCBAC1C11.01c,StBAC16H6.33c;locus_tag=SCO5998
NC_003888.3	RefSeq	CDS	6573186	6574715	.	-	0	ID=cds5942;Parent=gene6061;Dbxref=Genbank:NP_733681.1,GeneID:1101440;Name=NP_733681.1;Note=SCBAC1C11.01c%2C murA2%2C possible bifunctional protein (fragment)%2C len: >138 aa%3B N-terminal domain similar to TR:Q9X153 (EMBL:AE001787) Thermotoga maritima lacI-family transcriptional regulator%2C TM1330%2C 111 aa%3B fasta scores: opt: 139 z-score: 193.0 E(): 0.0033%3B 39.4%25 identity in 66 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and possible helix-turn-helix motif at residues 22..43 (+7.45 SD) and C-terminal domain similar to TR:Q9PJT7 (EMBL:AE002342) Chlamydia muridarum UDP-N-acetylglucosamine 1-carboxyvinyltransferase TC0740%2C 442 aa%3B fasta scores: opt: 148 z-score: 195.2 E(): 0.0025%3B 38.1%25 identity in 63 aa overlap~SCBAC16H6.33c%2C murA2%2C possible UDP-N-acetylglucosamine transferase%2C len: 437 aa: similar to many eg. SW:P33986 (MURA_ACIGB) UDP-N-acetylglucosamine 1-carboxyvinyl-transferase from Acinetobacter genomosp. 11 (419 aa) fasta scores%3B opt: 438%2C Z-score: 509.1%2C 30.233%25 identity (31.863%25 ungapped) in 430 aa overlap and TR:Q9L1U5 (EMBL:AL138851) UDP-N-acetylglucosamine transferase from Streptomyces coelicolor SCE59.08 (448 aa) fasta scores%3B opt: 484%2C Z-score: 561.7%2C 29.890%25 identity (33.252%25 ungapped) in 455 aa overlap. Contains Pfam match to entry PF00275 EPSP_syntase%2C EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase).;gbkey=CDS;gene=murA2;product=UDP-N-acetylglucosamine transferase;protein_id=NP_733681.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6573228	6574154	.	-	.	ID=id7903;Dbxref=GeneID:1101440;Note=Pfam match to entry PF00275 EPSP_syntase%2C EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)%2C score 62.10%2C E-value 5.9e-16;gbkey=misc_feature;gene=murA2
NC_003888.3	RefSeq	sequence_feature	6574515	6574679	.	-	.	ID=id7904;Dbxref=GeneID:1101440;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 64.70%2C E-value 2e-15;gbkey=misc_feature;gene=murA2
NC_003888.3	RefSeq	sequence_feature	6574966	6578165	.	+	.	ID=id7905;Note=previously sequenced DNA fragment. EMBL:AF180948 Streptomyces coelicolor aconitase (sacA) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6575293	6575298	.	+	.	ID=id7906;gbkey=RBS
NC_003888.3	RefSeq	gene	6575305	6578019	.	+	.	ID=gene6062;Dbxref=GeneID:1101441;Name=sacA;gbkey=Gene;gene=sacA;gene_biotype=protein_coding;gene_synonym=sacA,SCBAC1C11.02;locus_tag=SCO5999
NC_003888.3	RefSeq	CDS	6575305	6578019	.	+	0	ID=cds5943;Parent=gene6062;Dbxref=Genbank:NP_630114.1,GeneID:1101441;Name=NP_630114.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;gene=sacA;product=aconitate hydratase;protein_id=NP_630114.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6575515	6576507	.	+	.	ID=id7907;Dbxref=GeneID:1101441;Note=Pfam match to entry PF00330 aconitase%2C Aconitase family (aconitate hydratase)%2C score 536.20%2C E-value 2.8e-163;gbkey=misc_feature;gene=sacA
NC_003888.3	RefSeq	sequence_feature	6576592	6577020	.	+	.	ID=id7908;Dbxref=GeneID:1101441;Note=Pfam match to entry PF00330 aconitase%2C Aconitase family (aconitate hydratase)%2C score 257.20%2C E-value 5.7e-78;gbkey=misc_feature;gene=sacA
NC_003888.3	RefSeq	sequence_feature	6576613	6576663	.	+	.	ID=id7909;Dbxref=GeneID:1101441;Note=PS00450 Aconitase family signature 1;gbkey=misc_feature;gene=sacA
NC_003888.3	RefSeq	sequence_feature	6576811	6576852	.	+	.	ID=id7910;Dbxref=GeneID:1101441;Note=PS01244 Aconitase family signature 2;gbkey=misc_feature;gene=sacA
NC_003888.3	RefSeq	sequence_feature	6577402	6577935	.	+	.	ID=id7911;Dbxref=GeneID:1101441;Note=Pfam match to entry PF00694 Aconitase_C%2C Aconitase C-terminal domain%2C score 217.30%2C E-value 2.3e-61;gbkey=misc_feature;gene=sacA
NC_003888.3	RefSeq	gene	6578236	6578481	.	+	.	ID=gene6063;Dbxref=GeneID:1101442;Name=SCBAC1C11.03;gbkey=Gene;gene=SCBAC1C11.03;gene_biotype=protein_coding;gene_synonym=SCBAC1C11.03;locus_tag=SCO6000
NC_003888.3	RefSeq	CDS	6578236	6578481	.	+	0	ID=cds5944;Parent=gene6063;Dbxref=Genbank:NP_630115.1,GeneID:1101442;Name=NP_630115.1;Note=SCBAC1C11.03%2C hypothetical protein%2C len: 81 aa%3B low similarity to TR:Q9RDI8 (EMBL:AL136519) Streptomyces coelicolor hypothetical 7.0 kDa protein SCC57A.09c%2C 65 aa%3B fasta scores: opt: 135 z-score: 199.2 E(): 0.0015%3B 46.2%25 identity in 52 aa overlap;gbkey=CDS;gene=SCBAC1C11.03;product=hypothetical protein;protein_id=NP_630115.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6578459	6578464	.	+	.	ID=id7912;Dbxref=GeneID:1101442;gbkey=RBS;gene=SCBAC1C11.03
NC_003888.3	RefSeq	gene	6578520	6578807	.	+	.	ID=gene6064;Dbxref=GeneID:1101443;Name=SCBAC1C11.04;gbkey=Gene;gene=SCBAC1C11.04;gene_biotype=protein_coding;gene_synonym=SCBAC1C11.04;locus_tag=SCO6001
NC_003888.3	RefSeq	CDS	6578520	6578807	.	+	0	ID=cds5945;Parent=gene6064;Dbxref=Genbank:NP_630116.1,GeneID:1101443;Name=NP_630116.1;Note=SCBAC1C11.04%2C membrane protein%2C len: 95 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCBAC1C11.04;product=hypothetical protein;protein_id=NP_630116.1;transl_table=11
NC_003888.3	RefSeq	gene	6578743	6579171	.	-	.	ID=gene6065;Dbxref=GeneID:1101444;Name=SCBAC1C11.05c;gbkey=Gene;gene=SCBAC1C11.05c;gene_biotype=protein_coding;gene_synonym=SCBAC1C11.05c;locus_tag=SCO6002
NC_003888.3	RefSeq	CDS	6578743	6579171	.	-	0	ID=cds5946;Parent=gene6065;Dbxref=Genbank:NP_630117.1,GeneID:1101444;Name=NP_630117.1;Note=SCBAC1C11.05c%2C membrane protein%2C len: 142 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC1C11.05c;product=hypothetical protein;protein_id=NP_630117.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6579177	6579182	.	-	.	ID=id7913;gbkey=RBS
NC_003888.3	RefSeq	gene	6579213	6580073	.	-	.	ID=gene6066;Dbxref=GeneID:1101445;Name=SCBAC1C11.06c;gbkey=Gene;gene=SCBAC1C11.06c;gene_biotype=protein_coding;gene_synonym=SCBAC1C11.06c;locus_tag=SCO6003
NC_003888.3	RefSeq	CDS	6579213	6580073	.	-	0	ID=cds5947;Parent=gene6066;Dbxref=Genbank:NP_630118.1,GeneID:1101445;Name=NP_630118.1;Note=SCBAC1C11.06c%2C possible DNA-binding protein%2C len: 286 aa%3B similar to TR:CAC01466 (EMBL:AL391014) Streptomyces coelicolor  DNA-binding protein 2SCG1.17%2C 286 aa%3B fasta scores: opt: 528 z-score: 639.9 E(): 4.2e-28%3B 37.4%25 identity in 281 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and possible helix-turn-helix motif at residues 27..48 (+4.04 SD);gbkey=CDS;gene=SCBAC1C11.06c;product=DNA-binding protein;protein_id=NP_630118.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6579858	6580022	.	-	.	ID=id7914;Dbxref=GeneID:1101445;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 40.30%2C E-value 4.2e-08;gbkey=misc_feature;gene=SCBAC1C11.06c
NC_003888.3	RefSeq	ribosome_entry_site	6580079	6580084	.	-	.	ID=id7915;gbkey=RBS
NC_003888.3	RefSeq	gene	6580256	6584062	.	-	.	ID=gene6067;Dbxref=GeneID:1101446;Name=SC7B7.01c;gbkey=Gene;gene=SC7B7.01c;gene_biotype=protein_coding;gene_synonym=SC7B7.01c,SCBAC1C11.07c;locus_tag=SCO6004
NC_003888.3	RefSeq	CDS	6580256	6584062	.	-	0	ID=cds5948;Parent=gene6067;Dbxref=Genbank:NP_733682.1,GeneID:1101446;Name=NP_733682.1;Note=SC7B7.01c%2C  ATP/GTP binding protein%2C partial ORF%2C len: >626 aa%3B contains possible N-terminal signal sequence and PS00017 ATP/GTP-binding site motif A (P-loop)~SCBAC1C11.07c%2C conserved hypothetical protein (fragment)%2C len: >676 aa%3B similar to C-terminal domain of TR:Q9WXI8 (EMBL:AB025248) Bacillus sp. M-90 alpha-1%2C2-mannosidase precursor AmaN2%2C 1976 aa%3B fasta scores: opt: 1575 z-score: 1715.3 E(): 0%3B 45.7%25 identity in 705 aa overlap;gbkey=CDS;gene=SC7B7.01c;product=ATP/GTP binding protein;protein_id=NP_733682.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6582971	6582994	.	-	.	ID=id7916;Dbxref=GeneID:1101446;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7B7.01c
NC_003888.3	RefSeq	ribosome_entry_site	6584074	6584078	.	-	.	ID=id7917;Note=possible RBS upstream of SC7B7.01c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6584612	6584615	.	+	.	ID=id7918;Note=possible RBS upstream of SC7B7.02;gbkey=RBS
NC_003888.3	RefSeq	gene	6584624	6586033	.	+	.	ID=gene6068;Dbxref=GeneID:1101447;Name=SC7B7.02;gbkey=Gene;gene=SC7B7.02;gene_biotype=protein_coding;gene_synonym=SC7B7.02;locus_tag=SCO6005
NC_003888.3	RefSeq	CDS	6584624	6586033	.	+	0	ID=cds5949;Parent=gene6068;Dbxref=Genbank:NP_630119.1,GeneID:1101447;Name=NP_630119.1;Note=SC7B7.02%2C possible lipoprotein%2C len: 469%3B has similarity to signal sequence of Mycobacterium leprae hypothetical protein TR:E334742 (EMBL:Z98604) MLCB2052.27 (445 aa)%2C fasta scores%3B opt: 75 z-score: 199.2 E(): 0.00062%2C 23.3%25 identity in 335 aa overlap. Contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC7B7.02;product=lipoprotein;protein_id=NP_630119.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6584681	6584713	.	+	.	ID=id7919;Dbxref=GeneID:1101447;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC7B7.02
NC_003888.3	RefSeq	gene	6586041	6587102	.	+	.	ID=gene6069;Dbxref=GeneID:1101448;Name=SC7b7.03;gbkey=Gene;gene=SC7b7.03;gene_biotype=protein_coding;gene_synonym=SC7b7.03;locus_tag=SCO6006
NC_003888.3	RefSeq	CDS	6586041	6587102	.	+	0	ID=cds5950;Parent=gene6069;Dbxref=Genbank:NP_630120.1,GeneID:1101448;Name=NP_630120.1;Note=SC7b7.03%2C probable integral membrane transport protein%2C len: 353 aa%3B similar to many members of the MALFG subfamily of the binding-protein-dependant transport system membrane proteins eg. MSMF_STRMU Q00750 multiple sugar-binding transport system permease (290 aa)%2C fasta scores%3B opt: 393 z-score: 636.8 E(): 2.6e-28%2C 32.5%25 identity in 280 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=CDS;gene=SC7b7.03;product=transmembrane transport protein;protein_id=NP_630120.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6586689	6586775	.	+	.	ID=id7920;Dbxref=GeneID:1101448;Note=PS00402 Binding-protein-dependent transport systems inner membrane component signature;gbkey=misc_feature;gene=SC7b7.03
NC_003888.3	RefSeq	ribosome_entry_site	6587088	6587092	.	+	.	ID=id7921;Dbxref=GeneID:1101448;Note=possible RBS upstream of SC7b7.04;gbkey=RBS;gene=SC7b7.03
NC_003888.3	RefSeq	gene	6587099	6588007	.	+	.	ID=gene6070;Dbxref=GeneID:1101449;Name=SC7b7.04;gbkey=Gene;gene=SC7b7.04;gene_biotype=protein_coding;gene_synonym=SC7b7.04;locus_tag=SCO6007
NC_003888.3	RefSeq	CDS	6587099	6588007	.	+	0	ID=cds5951;Parent=gene6070;Dbxref=Genbank:NP_630121.1,GeneID:1101449;Name=NP_630121.1;Note=SC7b7.04%2C probable integral membrane transport protein%2C len: 301 aa%3B similar to many members of the MALFG subfamily of the binding-protein-dependant transport systems membrane proteins eg. TR:Q06111 (EMBL:X66092) transport system permease from Clostridium perfringens (275 aa)%2C fasta scores%3B opt: 590 z-score: 796.5 E(): 0%2C 33.6%25 identity in 265 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=CDS;gene=SC7b7.04;product=transmembrane transport protein;protein_id=NP_630121.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6587654	6587740	.	+	.	ID=id7922;Dbxref=GeneID:1101449;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=misc_feature;gene=SC7b7.04
NC_003888.3	RefSeq	stem_loop	6588035	6588084	.	+	.	ID=id7923;Note=hairpin loop with 23bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	6588228	6588231	.	+	.	ID=id7924;Note=possible RBS upstream of SC7B7.05;gbkey=RBS
NC_003888.3	RefSeq	gene	6588242	6589453	.	+	.	ID=gene6071;Dbxref=GeneID:1101450;Name=SC7B7.05;gbkey=Gene;gene=SC7B7.05;gene_biotype=protein_coding;gene_synonym=SC7B7.05;locus_tag=SCO6008
NC_003888.3	RefSeq	CDS	6588242	6589453	.	+	0	ID=cds5952;Parent=gene6071;Dbxref=Genbank:NP_630122.1,GeneID:1101450;Name=NP_630122.1;Note=SC7B7.05%2C probable transcriptional repressor protein%2C len 403 aa%3B similar to many eg. XYLR_ANATH Q44406 xylose repressor from Anaerocellum thermophilum (399 aa)%2C fasta scores%3B opt: 548 z-score: 767.3 E(): 0%2C 33.1%25 identity in 393 aa overlap. Contains PS01125 ROK family signature and helix-turn-helix motif at aa positions 29-50 (Score 2016%2C +6.05 SD);gbkey=CDS;gene=SC7B7.05;product=transcriptional repressor protein;protein_id=NP_630122.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6588884	6588967	.	+	.	ID=id7925;Dbxref=GeneID:1101450;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SC7B7.05
NC_003888.3	RefSeq	ribosome_entry_site	6589562	6589566	.	+	.	ID=id7926;Note=possible RBS upstream of SC7B7.06;gbkey=RBS
NC_003888.3	RefSeq	gene	6589575	6590690	.	+	.	ID=gene6072;Dbxref=GeneID:1101451;Name=SC7B7.06;gbkey=Gene;gene=SC7B7.06;gene_biotype=protein_coding;gene_synonym=SC7B7.06;locus_tag=SCO6009
NC_003888.3	RefSeq	CDS	6589575	6590690	.	+	0	ID=cds5953;Parent=gene6072;Dbxref=Genbank:NP_630123.1,GeneID:1101451;Name=NP_630123.1;Note=SC7B7.06%2C probable solute-binding protein of transmembrane transport system%2C len: 403 aa%3B similar to many eg. XYLF_ECOLI P37387 d-xylose-binding periplasmic protein precursor (330 aa)%2C fasta scores%3B opt: 619 z-score: 573.4 E(): 8.9e-25%2C 35.7%25 identity in 325 aa overlap. Contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC7B7.06;product=solute-binding protein;protein_id=NP_630123.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6589614	6589646	.	+	.	ID=id7927;Dbxref=GeneID:1101451;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC7B7.06
NC_003888.3	RefSeq	ribosome_entry_site	6590844	6590849	.	+	.	ID=id7928;Note=possible RBS upstream of SC7B7.07;gbkey=RBS
NC_003888.3	RefSeq	gene	6590859	6591641	.	+	.	ID=gene6073;Dbxref=GeneID:1101452;Name=SC7B7.07;gbkey=Gene;gene=SC7B7.07;gene_biotype=protein_coding;gene_synonym=SC7B7.07;locus_tag=SCO6010
NC_003888.3	RefSeq	CDS	6590859	6591641	.	+	0	ID=cds5954;Parent=gene6073;Dbxref=Genbank:NP_630124.1,GeneID:1101452;Name=NP_630124.1;Note=SC7B7.07%2C probable ABC-transport system ATP binding protein%2C len: 260 aa%3B similar to many eg. XYLG_ECOLI P37388 d-xylose transport atp-binding protein (513 aa)%2C fasta scores%3B opt: 567 z-score: 580.0 E(): 3.8e-25%2C 36.5%25 identity in 255 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Possible alternative start 9 bp upstream.;gbkey=CDS;gene=SC7B7.07;product=ABC transporter ATP-binding protein;protein_id=NP_630124.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6590973	6590996	.	+	.	ID=id7929;Dbxref=GeneID:1101452;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7B7.07
NC_003888.3	RefSeq	sequence_feature	6591288	6591332	.	+	.	ID=id7930;Dbxref=GeneID:1101452;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC7B7.07
NC_003888.3	RefSeq	gene	6591638	6592930	.	+	.	ID=gene6074;Dbxref=GeneID:1101453;Name=SC7B7.08;gbkey=Gene;gene=SC7B7.08;gene_biotype=protein_coding;gene_synonym=SC7B7.08;locus_tag=SCO6011
NC_003888.3	RefSeq	CDS	6591638	6592930	.	+	0	ID=cds5955;Parent=gene6074;Dbxref=Genbank:NP_630125.1,GeneID:1101453;Name=NP_630125.1;Note=SC7B7.08%2C probable ABC-type trans- membrane transport protein%2C len: 430 aa%3B similar to many others of the ARAH/RBSC subfamily of the binding-protein dependent transport systems eg. XYLH_ECOLI P37389 xylose transport permease xylH (393 aa)%2C fasta scores%3B opt: 695 z-score: 690.3 E(): 2.7e-31%2C 34.2%25 identity in 377 aa overlap. Possible alternative start site 33 aa downstream;gbkey=CDS;gene=SC7B7.08;product=ABC transporter;protein_id=NP_630125.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6592953	6592999	.	+	.	ID=id7931;Note=hairpin with 19/20 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6593034	6594557	.	-	.	ID=gene6075;Dbxref=GeneID:1101454;Name=SC7B7.09c;gbkey=Gene;gene=SC7B7.09c;gene_biotype=protein_coding;gene_synonym=SC7B7.09c;locus_tag=SCO6012
NC_003888.3	RefSeq	CDS	6593034	6594557	.	-	0	ID=cds5956;Parent=gene6075;Dbxref=Genbank:NP_630126.1,GeneID:1101454;Name=NP_630126.1;Note=SC7B7.09c%2C probable hydrolase (hypothetical protein)%2C len: 507 aa%3B similar to many chitinases eg. TR:Q59145 (EMBL:D31818) chitinase II precursor (EC 3.2.1.14) Aeromonas sp. (542 aa)%2C fasta scores%3B opt: 410 z-score: 512.7 E(): 2.1e-21%2C 32.1%25 identity in 498 aa overlap. Contains N-terminal signal sequence and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC7B7.09c;product=chitinase;protein_id=NP_630126.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6593778	6593801	.	-	.	ID=id7932;Dbxref=GeneID:1101454;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7B7.09c
NC_003888.3	RefSeq	ribosome_entry_site	6594914	6594920	.	+	.	ID=id7933;Note=possible RBS upstream of SC7B7.10;gbkey=RBS
NC_003888.3	RefSeq	gene	6594926	6596854	.	+	.	ID=gene6076;Dbxref=GeneID:1101455;Name=SC1C3.01;gbkey=Gene;gene=SC1C3.01;gene_biotype=protein_coding;gene_synonym=SC1C3.01,SC7B7.10;locus_tag=SCO6013
NC_003888.3	RefSeq	CDS	6594926	6596854	.	+	0	ID=cds5957;Parent=gene6076;Dbxref=Genbank:NP_733683.1,GeneID:1101455;Name=NP_733683.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=SC1C3.01;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=NP_733683.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6595010	6595069	.	+	.	ID=id7934;Dbxref=GeneID:1101455;Note=PS00801 Transketolase signature 1;gbkey=misc_feature;gene=SC1C3.01
NC_003888.3	RefSeq	sequence_feature	6595985	6596761	.	+	.	ID=id7935;Dbxref=GeneID:1101455;Note=Pfam match to entry transketolase PF00456%2C Transketolase%2C score 32.69;gbkey=misc_feature;gene=SC1C3.01
NC_003888.3	RefSeq	ribosome_entry_site	6597032	6597037	.	+	.	ID=id7936;Note=possible RBS upstream of SC1C3.02;gbkey=RBS
NC_003888.3	RefSeq	gene	6597042	6598553	.	+	.	ID=gene6077;Dbxref=GeneID:1101456;Name=SC1C3.02;gbkey=Gene;gene=SC1C3.02;gene_biotype=protein_coding;gene_synonym=SC1C3.02;locus_tag=SCO6014
NC_003888.3	RefSeq	CDS	6597042	6598553	.	+	0	ID=cds5958;Parent=gene6077;Dbxref=Genbank:NP_630127.1,GeneID:1101456;Name=NP_630127.1;Note=SC1C3.02%2C possible cationic amino acid transporter%2C len: 503 aa%3B similar to many bacterial membrane proteins e.g. M. tuberculosis TR:O05896 EMBL%3B Z95121 MTCY20B11.28c (495 aa)%2C fasta scores%3B opt: 1649 z-score: 2116.1 E(): 0%2C 52.6%25 identity in 485 aa overlap%2C and to many eukaryotic transporters e.g. CTR1_HUMAN high-affinity cationic amino acid transporter (629 aa)%2C fasta scores%3B opt: 897 z-score: 1337.3E(): 0%2C 35.0%25 identity in 432 aa overlap. Contains 2x Pfam match to entry aa_permeases PF00324%2C Amino acid permeases%2C scores 50.38 and 51.60;gbkey=CDS;gene=SC1C3.02;product=cationic amino acid transporter;protein_id=NP_630127.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6597114	6597440	.	+	.	ID=id7937;Dbxref=GeneID:1101456;Note=Pfam match to entry aa_permeases PF00324%2C Amino acid permeases%2C score 50.38;gbkey=misc_feature;gene=SC1C3.02
NC_003888.3	RefSeq	sequence_feature	6597519	6598184	.	+	.	ID=id7938;Dbxref=GeneID:1101456;Note=Pfam match to entry aa_permeases PF00324%2C Amino acid permeases%2C score 51.60;gbkey=misc_feature;gene=SC1C3.02
NC_003888.3	RefSeq	stem_loop	6598584	6598647	.	+	.	ID=id7939;Note=hairpin loop with 32 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6598656	6599033	.	-	.	ID=gene6078;Dbxref=GeneID:1101457;Name=SC1C3.03c;gbkey=Gene;gene=SC1C3.03c;gene_biotype=protein_coding;gene_synonym=SC1C3.03c;locus_tag=SCO6015
NC_003888.3	RefSeq	CDS	6598656	6599033	.	-	0	ID=cds5959;Parent=gene6078;Dbxref=Genbank:NP_630128.1,GeneID:1101457;Name=NP_630128.1;Note=SC1C3.03c%2C unknown%2C len: 125 aa%3B some similarity to a hypothetical protein from M. tuberculosis TR:E1256517 (EMBL:AL022073) MTV051.14 (135 aa)%2C fasta scores%3B opt: 223 z-score: 329.2 E(): 4.2e-11%2C 39.8%25 identity in 113 aa overlap;gbkey=CDS;gene=SC1C3.03c;product=hypothetical protein;protein_id=NP_630128.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6599142	6600019	.	+	.	ID=id7940;Note=probable insertion sequence IS1647;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	6599142	6599167	.	+	.	ID=id7941;Note=possible IR at end of insertion sequence IS1647: 22/26bp identical to the downstream inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6599193	6600001	.	+	.	ID=gene6079;Dbxref=GeneID:1101458;Name=SC1C3.04;gbkey=Gene;gene=SC1C3.04;gene_biotype=pseudogene;gene_synonym=SC1C3.04,SC1C3.05;locus_tag=SCO6016;pseudo=true
NC_003888.3	RefSeq	sequence_feature	6599193	6600001	.	+	.	ID=id7942;Dbxref=GeneID:1101458;Note=SC1C3.04%2C probable insertion element IS1647 transposase%2C len: 119 aa%3B similar to many e.g. Burkholderia cepacia YI22_BURCE insertion element IS402 hypothetical protein (147 aa)%2C fasta scores%3B opt: 283 z-score: 436.3 E(): 4.5e-17%2C 37.9%25identity in 116 aa overlap. The complete transposase is probably translated by ribosomal frameshifting into the downstream ORF~SC1C3.05%2C probable insertion element IS1647 transposase%2C len: 150 aa%3B similar to many e.g. Burkholderia cepacia YI21_BURCE insertion element is 402 hypothetical protein (211 aa)%2C fasta scores opt: 429 z-score: 674.5 E(): 2.4e-30%2C 44.8%25identity in 143 aa overlap. The complete transposase is probably translated by ribosomal frameshifting from the upstream ORF%3B insertion element IS1647 transposase;gbkey=misc_feature;gene=SC1C3.04
NC_003888.3	RefSeq	sequence_feature	6599539	6599545	.	+	.	ID=id7943;Dbxref=GeneID:1101458;Note=possible programmed ribosomal frameshift signal;gbkey=misc_feature;gene=SC1C3.04
NC_003888.3	RefSeq	repeat_region	6599994	6600019	.	-	.	ID=id7944;Note=possible IR at end of insertion sequence IS1647: 22/26bp identical to the upstream inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6600024	6601049	.	+	.	ID=gene6080;Dbxref=GeneID:1101459;Name=SC1C3.06;gbkey=Gene;gene=SC1C3.06;gene_biotype=protein_coding;gene_synonym=SC1C3.06;locus_tag=SCO6018
NC_003888.3	RefSeq	CDS	6600024	6601049	.	+	0	ID=cds5960;Parent=gene6080;Dbxref=Genbank:NP_630129.1,GeneID:1101459;Name=NP_630129.1;Note=SC1C3.06%2C unknown%2C len: 341 aa%3B similar to downsteam CDS SC1C3.07 (E(): 2.3e-19%2C 36.2%25 identity in 348 aa overlap%2C and to C-terminus of SC1C3.13 (E(): 3.7e-09%2C 32.0%25 identity in 356 aa overlap);gbkey=CDS;gene=SC1C3.06;product=hypothetical protein;protein_id=NP_630129.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6601216	6601220	.	+	.	ID=id7945;Note=possible RBS upstream of SC1C3.07;gbkey=RBS
NC_003888.3	RefSeq	gene	6601234	6602355	.	+	.	ID=gene6081;Dbxref=GeneID:1101460;Name=SC1C3.07;gbkey=Gene;gene=SC1C3.07;gene_biotype=protein_coding;gene_synonym=SC1C3.07;locus_tag=SCO6019
NC_003888.3	RefSeq	CDS	6601234	6602355	.	+	0	ID=cds5961;Parent=gene6081;Dbxref=Genbank:NP_630130.1,GeneID:1101460;Name=NP_630130.1;Note=SC1C3.07%2C unknown%2C len: 373 aa%3B similar to upstream gene SC1C3.06 (E(): 2.1e-21%2C 36.2%25 identity in 348 aa overlap) and to C-terminus of SC1C3.13 (E(): 1.8e-18%2C 31.8%25 identity in 337 aa overlap);gbkey=CDS;gene=SC1C3.07;product=hypothetical protein;protein_id=NP_630130.1;transl_table=11
NC_003888.3	RefSeq	gene	6602452	6603552	.	-	.	ID=gene6082;Dbxref=GeneID:1101461;Name=SC1C3.08c;gbkey=Gene;gene=SC1C3.08c;gene_biotype=protein_coding;gene_synonym=SC1C3.08c;locus_tag=SCO6020
NC_003888.3	RefSeq	CDS	6602452	6603552	.	-	0	ID=cds5962;Parent=gene6082;Dbxref=Genbank:NP_630131.1,GeneID:1101461;Name=NP_630131.1;Note=SC1C3.08c%2C possible transcriptional regulator%2C len: 366 aa%3B some similarity to many transcriptional regulators%2C e.g. TR:P96499 (EMBL:U56901) B. subtilis transcriptional regulator YVHJ (391 aa)%2C fasta scores%3B opt:283 z-score: 276.9 E(): 3.4e-08%2C 28.2%25 identity in 365 aaoverlap. Contains Highly basic N-terminus%2C followed by hydrophobic region (possibly transmembrane);gbkey=CDS;gene=SC1C3.08c;product=transcriptional regulator;protein_id=NP_630131.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6603563	6603566	.	-	.	ID=id7946;Note=possible RBS upstream of SC1C3.08c;gbkey=RBS
NC_003888.3	RefSeq	gene	6603996	6605621	.	+	.	ID=gene6083;Dbxref=GeneID:1101462;Name=SC1C3.09;gbkey=Gene;gene=SC1C3.09;gene_biotype=protein_coding;gene_synonym=SC1C3.09;locus_tag=SCO6021
NC_003888.3	RefSeq	CDS	6603996	6605621	.	+	0	ID=cds5963;Parent=gene6083;Dbxref=Genbank:NP_630132.1,GeneID:1101462;Name=NP_630132.1;Note=SC1C3.09%2C unknown%2C len: 541 aa%3B some similarity to hypothetical proteins e.g. M. tuberculosis TR:O06628 (EMBL:Z95618) MTCY07H7A.03 (532 aa)%2C fasta scores%3B opt: 897 z-score: 779.8 E(): 0%2C 35.4%25 identity in 525 aa overlap. Also similar to two genes linked to capsular polysaccharide biosynthesis genes in Neisseria meningitidis: TR:Q51151 (EMBL:L09188) (373 aa)%2C fasta scores%3B opt: 547 z-score: 579.0 E(): 5.1e-25%2C 29.3%25 identity in 355 aa overlap and TR:G2979674 (EMBL:AF019760) SACB (545 aa)%2C fasta scores%3B opt: opt: 594 z-score: 550.3 E(): 2e-23%2C 31.4%25 identity in 322 aa overlap. Also smilar to downstream genes SC1C3.11 (E(): 0%2C 47.7%25 identity in 509 aa overlap) and SC1C3.10 (E(): 1.6e-16%2C 28.0%25 identity in 542 aa overlap);gbkey=CDS;gene=SC1C3.09;product=hypothetical protein;protein_id=NP_630132.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6605625	6605628	.	+	.	ID=id7947;Note=possible RBS upstream of SC1C3.10;gbkey=RBS
NC_003888.3	RefSeq	gene	6605637	6607259	.	+	.	ID=gene6084;Dbxref=GeneID:1101463;Name=SC1C3.10;gbkey=Gene;gene=SC1C3.10;gene_biotype=protein_coding;gene_synonym=SC1C3.10;locus_tag=SCO6022
NC_003888.3	RefSeq	CDS	6605637	6607259	.	+	0	ID=cds5964;Parent=gene6084;Dbxref=Genbank:NP_630133.1,GeneID:1101463;Name=NP_630133.1;Note=SC1C3.10%2C unknown%2C len: 540 aa%3B some similarity to hypothetical proteins e.g. M. tuberculosis TR:O06628 (EMBL:Z95618) MTCY07H7A.03 (532 aa)%2C fasta scores%3B opt: 151 z-score: 278.3 E(): 2.8e-08%2C 25.9%25 identity in 529 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature%2C though this may be spurious. Also similar to flanking genes SC1C3.11 (E(): 2.5e-20%2C 29.0%25 identity in 583 aa overlap) and SC1C3.09 (E(): 1.1e-14%2C 28.0%25 identity in 542 aa overlap);gbkey=CDS;gene=SC1C3.10;product=hypothetical protein;protein_id=NP_630133.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6607110	6607196	.	+	.	ID=id7948;Dbxref=GeneID:1101463;Note=PS00402 Binding-protein-dependent transport systemsinner membrane comp signature;gbkey=misc_feature;gene=SC1C3.10
NC_003888.3	RefSeq	gene	6607256	6609016	.	+	.	ID=gene6085;Dbxref=GeneID:1101464;Name=SC1C3.11;gbkey=Gene;gene=SC1C3.11;gene_biotype=protein_coding;gene_synonym=SC1C3.11;locus_tag=SCO6023
NC_003888.3	RefSeq	CDS	6607256	6609016	.	+	0	ID=cds5965;Parent=gene6085;Dbxref=Genbank:NP_630134.1,GeneID:1101464;Name=NP_630134.1;Note=SC1C3.11%2C unknown%2C len: 586 aa%3B some similarity to hypothetical proteins e.g. M. tuberculosis TR:O06628 (EMBL:Z95618) MTCY07H7A.03 (532 aa)%2C fasta scores%3B opt: 885 z-score: 918.8 E(): 0%2C 36.0%25 identity in 500 aa overlap. Also similar to two genes linked to capsular polysaccharide biosynthesis genes in Neisseria meningitidis: TR:Q51151 (EMBL:L09188) (373 aa)%2C fasta scores%3B opt: 561 z-score: 537.2 E(): 1.1e-22%2C 29.8%25 identity in 326 aa overlap and TR:G2979674 (EMBL:AF019760) SACB (545 aa)%2C fasta scores%3B opt: 678 z-score: 482.7 E(): 1.2e-19%2C 32.5%25 identity in 323 aa overlap. Also similar to upstream genes SC1C3.09 (E(): 0%2C 47.9%25 identity in 511 aa overlap) and SC1C3.10 (E(): 1.3e-23%2C 29.3%25 identity in 584 aa overlap);gbkey=CDS;gene=SC1C3.11;product=hypothetical protein;protein_id=NP_630134.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6608996	6609001	.	+	.	ID=id7949;Dbxref=GeneID:1101464;Note=possible RBS upstream of SC1C3.12;gbkey=RBS;gene=SC1C3.11
NC_003888.3	RefSeq	gene	6609013	6611106	.	+	.	ID=gene6086;Dbxref=GeneID:1101465;Name=SC1C3.12;gbkey=Gene;gene=SC1C3.12;gene_biotype=protein_coding;gene_synonym=SC1C3.12;locus_tag=SCO6024
NC_003888.3	RefSeq	CDS	6609013	6611106	.	+	0	ID=cds5966;Parent=gene6086;Dbxref=Genbank:NP_630135.1,GeneID:1101465;Name=NP_630135.1;Note=SC1C3.12%2C possible transferase%2C len: 697 aa%3B weakly similar to many polysaccharide biosynthesis proteins and to transferases e.g. Rhizobium leguminosarum TR:G2944086 (EMBL:AF050103) mannosyl transferase (352 aa)%2C fasta scores%3B opt: 204 z-score: 193.1 E(): 0.0016%2C 28.0%25 identityin 239 aa overlap;gbkey=CDS;gene=SC1C3.12;product=transferase;protein_id=NP_630135.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6611129	6611133	.	+	.	ID=id7950;Note=possible RBS upstream of SC1C3.13;gbkey=RBS
NC_003888.3	RefSeq	gene	6611138	6613105	.	+	.	ID=gene6087;Dbxref=GeneID:1101466;Name=SC1C3.13;gbkey=Gene;gene=SC1C3.13;gene_biotype=protein_coding;gene_synonym=SC1C3.13;locus_tag=SCO6025
NC_003888.3	RefSeq	CDS	6611138	6613105	.	+	0	ID=cds5967;Parent=gene6087;Dbxref=Genbank:NP_630136.1,GeneID:1101466;Name=NP_630136.1;Note=SC1C3.13%2C unknown%2C len: 655 aa%3B C-terminus is similar to upstream genes TR:O69849 (EMBL:AL023702) SC1C3.07 (opt: 399 Z-score: 441.0 E(): 6.2e-17%3B 31.751%25 identity in 337 aa overlap) and TR:O69848 (EMBL:AL023702) SC1C3.06 (opt: 428 Z-score: 473.3 E(): 9.9e-19%3B 32.022%25 identity in 356 aa overlap);gbkey=CDS;gene=SC1C3.13;product=hypothetical protein;protein_id=NP_630136.1;transl_table=11
NC_003888.3	RefSeq	gene	6613171	6615300	.	-	.	ID=gene6088;Dbxref=GeneID:1101467;Name=SC1C3.14c;gbkey=Gene;gene=SC1C3.14c;gene_biotype=protein_coding;gene_synonym=SC1C3.14c;locus_tag=SCO6026
NC_003888.3	RefSeq	CDS	6613171	6615300	.	-	0	ID=cds5968;Parent=gene6088;Dbxref=Genbank:NP_630137.1,GeneID:1101467;Name=NP_630137.1;Note=SC1C3.14c%2C probable fatty acid oxidation complex alpha-subunit%2C similar to many e.g. FADB_ECOLI (729 aa)%2C fasta scores%3B opt: 782 z-score: 863.1 E(): 0%2C 29.8%25 identity in671 aa overlap. Contains Pfam match to entry ECH PF00378%2C Enoyl-CoA hydratase/isomerase%2C score 49.78;gbkey=CDS;gene=SC1C3.14c;product=fatty acid oxidation complex alpha-subunit;protein_id=NP_630137.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6614644	6614922	.	-	.	ID=id7951;Dbxref=GeneID:1101467;Note=Pfam match to entry ECH PF00378%2C Enoyl-CoA hydratase/isomerase%2C score 49.78;gbkey=misc_feature;gene=SC1C3.14c
NC_003888.3	RefSeq	gene	6615297	6616514	.	-	.	ID=gene6089;Dbxref=GeneID:1101468;Name=SC1C3.15c;gbkey=Gene;gene=SC1C3.15c;gene_biotype=protein_coding;gene_synonym=SC1C3.15c;locus_tag=SCO6027
NC_003888.3	RefSeq	CDS	6615297	6616514	.	-	0	ID=cds5969;Parent=gene6089;Dbxref=Genbank:NP_630138.1,GeneID:1101468;Name=NP_630138.1;Note=SC1C3.15c%2C probable acetyl-coA acetyltransferase (thiolase)%2C len: 405 aa%3B similar to many e.g. E. coli TR:E242886 (EMBL:X97452 acetyl-coA acetyltransferase paaJ (401 aa)%2C fasta scores%3B opt: 718 z-score: 1313.7 E(): 0%2C 42.6%25 identity in 408 aa overlap. Contains Pfam match to entry thiolase PF00108%2C Thiolases%2C score 410.31;gbkey=CDS;gene=SC1C3.15c;product=acetyl-CoA acetyltransferase;protein_id=NP_630138.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6615306	6615310	.	-	.	ID=id7952;Dbxref=GeneID:1101468;Note=possible RBS upstream of SC1C3.14c;gbkey=RBS;gene=SC1C3.15c
NC_003888.3	RefSeq	sequence_feature	6615318	6616502	.	-	.	ID=id7953;Dbxref=GeneID:1101468;Note=Pfam match to entry thiolase PF00108%2C Thiolases%2C score 410.31;gbkey=misc_feature;gene=SC1C3.15c
NC_003888.3	RefSeq	ribosome_entry_site	6616522	6616526	.	-	.	ID=id7954;Note=possible RBS upstream of SC1C3.15c;gbkey=RBS
NC_003888.3	RefSeq	gene	6616708	6617892	.	-	.	ID=gene6090;Dbxref=GeneID:1101469;Name=SC1C3.16c;gbkey=Gene;gene=SC1C3.16c;gene_biotype=protein_coding;gene_synonym=SC1C3.16c;locus_tag=SCO6028
NC_003888.3	RefSeq	CDS	6616708	6617892	.	-	0	ID=cds5970;Parent=gene6090;Dbxref=Genbank:NP_630139.1,GeneID:1101469;Name=NP_630139.1;Note=SC1C3.16c%2C possible ribonuclease%2C len: 394 aa%3B similar to hypothetical proteins e.g. M. tuberculosis TR:O07183 (EMBL:Z96072) MTCY05A6.02 (438 aa)%2C fasta scores%3B opt: 1338 z-score: 1167.9 E(): 0%2C 51.9%25 identity in 405 aa overlap;gbkey=CDS;gene=SC1C3.16c;product=ribonuclease;protein_id=NP_630139.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6618019	6618056	.	+	.	ID=id7955;Note=hairpin loop with 19 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6618177	6618839	.	-	.	ID=gene6091;Dbxref=GeneID:1101470;Name=SC1C3.17c;gbkey=Gene;gene=SC1C3.17c;gene_biotype=protein_coding;gene_synonym=SC1C3.17c;locus_tag=SCO6029
NC_003888.3	RefSeq	CDS	6618177	6618839	.	-	0	ID=cds5971;Parent=gene6091;Dbxref=Genbank:NP_630140.1,GeneID:1101470;Name=NP_630140.1;Note=SC1C3.17c%2C probable two-component regulator%2C len: 220 aa%3B similar to many e.g. DEGU_BACSU transcriptional regulatory protein degU (229 aa)%2C fasta scores%3B opt: 168 z-score: 264.1 E(): 1.8e-07%2C 27.4%25 identity in 223 aa overlap. PS00622 Bacterial regulatory proteins%2C luxR family signature. Contains Pfam match to entry GerE PF00196%2C Bacterial regulatory proteins%2C luxR family%2C score 83.75 and to entry response_reg PF00072%2C Response regulator receiver domain%2C score 36.16;gbkey=CDS;gene=SC1C3.17c;product=two-component regulator;protein_id=NP_630140.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6618183	6618374	.	-	.	ID=id7956;Dbxref=GeneID:1101470;Note=Pfam match to entry GerE PF00196%2C Bacterial regulatory proteins%2C luxR family%2C score 83.75;gbkey=misc_feature;gene=SC1C3.17c
NC_003888.3	RefSeq	sequence_feature	6618240	6618323	.	-	.	ID=id7957;Dbxref=GeneID:1101470;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC1C3.17c
NC_003888.3	RefSeq	sequence_feature	6618453	6618785	.	-	.	ID=id7958;Dbxref=GeneID:1101470;Note=Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 36.16;gbkey=misc_feature;gene=SC1C3.17c
NC_003888.3	RefSeq	ribosome_entry_site	6618844	6618849	.	-	.	ID=id7959;Note=possible RBS upstream of SC1C3.17c;gbkey=RBS
NC_003888.3	RefSeq	gene	6619133	6619849	.	-	.	ID=gene6092;Dbxref=GeneID:1101471;Name=SC1C3.18c;gbkey=Gene;gene=SC1C3.18c;gene_biotype=protein_coding;gene_synonym=SC1C3.18c;locus_tag=SCO6030
NC_003888.3	RefSeq	CDS	6619133	6619849	.	-	0	ID=cds5972;Parent=gene6092;Dbxref=Genbank:NP_630141.1,GeneID:1101471;Name=NP_630141.1;Note=SC1C3.18c%2C unknown%2C len: 238 aa%3B similar to M. tuberculosis hypothetical protein TR:E1237486 (EMBL:AL021186) MTV010.04 (244 aa)%2C fasta scores%3B opt: 516 z-score: 539.2 E(): 8.4e-23%2C 41.7%25 identity in 223 aa overlap;gbkey=CDS;gene=SC1C3.18c;product=hypothetical protein;protein_id=NP_630141.1;transl_table=11
NC_003888.3	RefSeq	gene	6620001	6621068	.	+	.	ID=gene6093;Dbxref=GeneID:1101472;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=SCO6031
NC_003888.3	RefSeq	CDS	6620001	6621068	.	+	0	ID=cds5973;Parent=gene6093;Dbxref=Genbank:NP_630142.1,GeneID:1101472;Name=NP_630142.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=NP_630142.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6620097	6620126	.	+	.	ID=id7960;Dbxref=GeneID:1101472;Note=PS00906 Uroporphyrinogen decarboxylase signature 1;gbkey=misc_feature;gene=hemE
NC_003888.3	RefSeq	sequence_feature	6620451	6620498	.	+	.	ID=id7961;Dbxref=GeneID:1101472;Note=PS00907 Uroporphyrinogen decarboxylase signature 2;gbkey=misc_feature;gene=hemE
NC_003888.3	RefSeq	gene	6621097	6622617	.	-	.	ID=gene6094;Dbxref=GeneID:1101473;Name=SC1C3.20c;gbkey=Gene;gene=SC1C3.20c;gene_biotype=protein_coding;gene_synonym=SC1C3.20c;locus_tag=SCO6032
NC_003888.3	RefSeq	CDS	6621097	6622617	.	-	0	ID=cds5974;Parent=gene6094;Dbxref=Genbank:NP_630143.1,GeneID:1101473;Name=NP_630143.1;Note=SC1C3.20c%2C possible hydrolase%2C len: 506 aa%3B weakly similar to many e.g. HEXA_ALTSO beta-hexosaminidase a precursor (598 aa)%2C fasta scores%3B opt: 463 z-score: 613.4 E(): 6.2e-27%2C 29.7%25 identity in 526 aa overlap;gbkey=CDS;gene=SC1C3.20c;product=hydrolase;protein_id=NP_630143.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6622626	6622629	.	-	.	ID=id7962;Note=possible RBS upstream of SC1C3.20c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6623023	6623026	.	+	.	ID=id7963;Note=possible RBS upstream of SC1C3.21;gbkey=RBS
NC_003888.3	RefSeq	gene	6623033	6624127	.	+	.	ID=gene6095;Dbxref=GeneID:1101474;Name=SC1C3.21;gbkey=Gene;gene=SC1C3.21;gene_biotype=protein_coding;gene_synonym=SC1C3.21;locus_tag=SCO6033
NC_003888.3	RefSeq	CDS	6623033	6624127	.	+	0	ID=cds5975;Parent=gene6095;Dbxref=Genbank:NP_630144.1,GeneID:1101474;Name=NP_630144.1;Note=SC1C3.21%2C unknown%2C len: 364 aa;gbkey=CDS;gene=SC1C3.21;product=hypothetical protein;protein_id=NP_630144.1;transl_table=11
NC_003888.3	RefSeq	gene	6624109	6625437	.	+	.	ID=gene6096;Dbxref=GeneID:1101475;Name=SC1C3.22;gbkey=Gene;gene=SC1C3.22;gene_biotype=protein_coding;gene_synonym=SC1C3.22;locus_tag=SCO6034
NC_003888.3	RefSeq	CDS	6624109	6625437	.	+	0	ID=cds5976;Parent=gene6096;Dbxref=Genbank:NP_630145.1,GeneID:1101475;Name=NP_630145.1;Note=SC1C3.22%2C unknown%2C len: 442 aa%3B contains TTA Leu codon: possible target for action of bldA;gbkey=CDS;gene=SC1C3.22;product=hypothetical protein;protein_id=NP_630145.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6624274	6624276	.	+	.	ID=id7964;Dbxref=GeneID:1101475;Note=TTA Leu codon: possible target for action of bldA;gbkey=misc_feature;gene=SC1C3.22
NC_003888.3	RefSeq	ribosome_entry_site	6625420	6625423	.	+	.	ID=id7965;Dbxref=GeneID:1101475;Note=possible RBS upstream of SC1C3.23;gbkey=RBS;gene=SC1C3.22
NC_003888.3	RefSeq	gene	6625434	6626642	.	+	.	ID=gene6097;Dbxref=GeneID:1101476;Name=SC1C3.23;gbkey=Gene;gene=SC1C3.23;gene_biotype=protein_coding;gene_synonym=SC1C3.23;locus_tag=SCO6035
NC_003888.3	RefSeq	CDS	6625434	6626642	.	+	0	ID=cds5977;Parent=gene6097;Dbxref=Genbank:NP_630146.1,GeneID:1101476;Name=NP_630146.1;Note=SC1C3.23%2C possible lysine/ornithine decarboxylase%2C len: 402 aa%3B simlar to Selenomonas ruminantium TR:D1025847 (EMBL:AB011029) lysine/ornithine decarboxylase (EC 4.1.1.17) Ldc (393 aa)%2C fasta scores%3B opt: 407 z-score: 521.2 E():8.4e-22%2C 32.8%25 identity in 387 aa overlap%2C and to many eukaryotic ornithine decarboxylases e.g. DCOR_CHICK ornithine decarboxylase (EC 4.1.1.17) (Odc) (450 aa)%2C fasta scores%3B opt: 407 z-score: 413.4 E(): 8.6e-16%2C 28.8%25 identity in 386 aa overlap. Contains PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site and PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2 and Pfam match to entry Orn_DAP_Arg_deC PF00278%2C Pyridoxal-dependent decarboxylases acting on ornithine%2C lysine%2C arginine and related substrates%2C score 188.77;gbkey=CDS;gene=SC1C3.23;product=lysine/ornithine decarboxylase;protein_id=NP_630146.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6625503	6626585	.	+	.	ID=id7966;Dbxref=GeneID:1101476;Note=Pfam match to entry Orn_DAP_Arg_deC PF00278%2C Pyridoxal-dependent decarboxylases acting on ornithine%2C lysine%2C arginine and related substrates%2C score 188.77;gbkey=misc_feature;gene=SC1C3.23
NC_003888.3	RefSeq	sequence_feature	6625581	6625637	.	+	.	ID=id7967;Dbxref=GeneID:1101476;Note=PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site;gbkey=misc_feature;gene=SC1C3.23
NC_003888.3	RefSeq	sequence_feature	6626052	6626102	.	+	.	ID=id7968;Dbxref=GeneID:1101476;Note=PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2;gbkey=misc_feature;gene=SC1C3.23
NC_003888.3	RefSeq	ribosome_entry_site	6626622	6626625	.	+	.	ID=id7969;Dbxref=GeneID:1101476;Note=possible RBS upstream of SC1C3.24;gbkey=RBS;gene=SC1C3.23
NC_003888.3	RefSeq	gene	6626635	6627204	.	+	.	ID=gene6098;Dbxref=GeneID:1101477;Name=SC1C3.24;gbkey=Gene;gene=SC1C3.24;gene_biotype=protein_coding;gene_synonym=SC1C3.24;locus_tag=SCO6036
NC_003888.3	RefSeq	CDS	6626635	6627204	.	+	0	ID=cds5978;Parent=gene6098;Dbxref=Genbank:NP_630147.1,GeneID:1101477;Name=NP_630147.1;Note=SC1C3.24%2C unknown%2C len: 189 aa;gbkey=CDS;gene=SC1C3.24;product=hypothetical protein;protein_id=NP_630147.1;transl_table=11
NC_003888.3	RefSeq	gene	6627211	6628443	.	+	.	ID=gene6099;Dbxref=GeneID:1101478;Name=SC1C3.25;gbkey=Gene;gene=SC1C3.25;gene_biotype=protein_coding;gene_synonym=SC1C3.25;locus_tag=SCO6037
NC_003888.3	RefSeq	CDS	6627211	6628443	.	+	0	ID=cds5979;Parent=gene6099;Dbxref=Genbank:NP_630148.1,GeneID:1101478;Name=NP_630148.1;Note=SC1C3.25%2C possible transmembrane transport protein%2C len: 410 aa%3B similar to e.g. Rhizobium meliloti MOSC_RHIMEmembrane protein mosC (407 aa)%2C fasta scores%3B opt: 290 z-score: 488.8 E(): 5.4e-20%2C 29.1%25 identity in 392 aa overlap;gbkey=CDS;gene=SC1C3.25;product=transmembrane transport protein;protein_id=NP_630148.1;transl_table=11
NC_003888.3	RefSeq	gene	6628480	6629631	.	-	.	ID=gene6100;Dbxref=GeneID:1101479;Name=SC1C3.26c;gbkey=Gene;gene=SC1C3.26c;gene_biotype=protein_coding;gene_synonym=SC1C3.26c;locus_tag=SCO6038
NC_003888.3	RefSeq	CDS	6628480	6629631	.	-	0	ID=cds5980;Parent=gene6100;Dbxref=Genbank:NP_630149.1,GeneID:1101479;Name=NP_630149.1;Note=SC1C3.26c%2C probable integral membrane protein%2C len:383 aa%3B start uncertain%2C similar to hypothetical proteins e.g. Aquifex aeolicus TR:G2983747 (EMBL:AE000734) AQ_1327 (227 aa)%2C fasta scores%3B opt: 472 z-score: 416.5 E(): 5.7e-16%2C 37.5%25 identity in 261 aa overlap. Contains PS00141 Eukaryotic and viral aspartyl proteases active site;gbkey=CDS;gene=SC1C3.26c;product=hypothetical protein;protein_id=NP_630149.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6628795	6628830	.	-	.	ID=id7970;Dbxref=GeneID:1101479;Note=PS00141 Eukaryotic and viral aspartyl proteases active site;gbkey=misc_feature;gene=SC1C3.26c
NC_003888.3	RefSeq	gene	6629805	6631202	.	-	.	ID=gene6101;Dbxref=GeneID:1101480;Name=SC1C3.27c;gbkey=Gene;gene=SC1C3.27c;gene_biotype=protein_coding;gene_synonym=SC1C3.27c;locus_tag=SCO6039
NC_003888.3	RefSeq	CDS	6629805	6631202	.	-	0	ID=cds5981;Parent=gene6101;Dbxref=Genbank:NP_630150.1,GeneID:1101480;Name=NP_630150.1;Note=SC1C3.27c%2C probable flavoprotein oxidoreductase%2C len: 465 aa%3B similar to many e.g. NAPE_ENTFA NADH peroxidase (EC 1.11.1.1) (447 aa)%2C fasta scores%3B opt: 642 z-score: 669.2 E(): 4.8e-30%2C 29.6%25 identity in 453 aa overlap;gbkey=CDS;gene=SC1C3.27c;product=flavoprotein oxidoreductase;protein_id=NP_630150.1;transl_table=11
NC_003888.3	RefSeq	gene	6631230	6632213	.	-	.	ID=gene6102;Dbxref=GeneID:1101481;Name=SC1C3.28c;gbkey=Gene;gene=SC1C3.28c;gene_biotype=protein_coding;gene_synonym=SC1C3.28c;locus_tag=SCO6040
NC_003888.3	RefSeq	CDS	6631230	6632213	.	-	0	ID=cds5982;Parent=gene6102;Dbxref=Genbank:NP_630151.1,GeneID:1101481;Name=NP_630151.1;Note=SC1C3.28c%2C probable lipoprotein%2C len: 327 aa%3B contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=SC1C3.28c;product=lipoprotein;protein_id=NP_630151.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6632100	6632132	.	-	.	ID=id7971;Dbxref=GeneID:1101481;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC1C3.28c
NC_003888.3	RefSeq	ribosome_entry_site	6632218	6632222	.	-	.	ID=id7972;Note=possible RBS upstream of SC1C3.28c;gbkey=RBS
NC_003888.3	RefSeq	gene	6632494	6633978	.	+	.	ID=gene6103;Dbxref=GeneID:1101482;Name=SC1B5.01;gbkey=Gene;gene=SC1B5.01;gene_biotype=protein_coding;gene_synonym=SC1B5.01,SC1C3.29;locus_tag=SCO6041
NC_003888.3	RefSeq	CDS	6632494	6633978	.	+	0	ID=cds5983;Parent=gene6103;Dbxref=Genbank:NP_733684.1,GeneID:1101482;Name=NP_733684.1;Note=SC1B5.01%2C possible hemY%2C protoporphyrinogen oxidase%2C partial CDS%2C len: > 468 aa%3B similar to many e.g. HEMG_BACSU P32397 bacillus subtilis. protoporphyrinogen oxidase (470 aa)%2C fasta scores%3B opt: 741 z-score: 711.8 E(): 2e-32%2C 32.9%25 identity in 453 aa overlap~SC1C3.29%2C possible hemY%2C protoporphyrinogen oxidase%2C partial CDS%2C len: > 61 aa%3B overlaps and ecxtends CDS from overlapping cosmid%2C SC1B5.01;gbkey=CDS;gene=SC1B5.01;product=protoporphyrinogen oxidase;protein_id=NP_733684.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6633970	6633973	.	+	.	ID=id7973;Dbxref=GeneID:1101482;Note=possible RBS upstream of SC1B5.02;gbkey=RBS;gene=SC1B5.01
NC_003888.3	RefSeq	gene	6633983	6634714	.	+	.	ID=gene6104;Dbxref=GeneID:1101483;Name=SC1B5.02;gbkey=Gene;gene=SC1B5.02;gene_biotype=protein_coding;gene_synonym=SC1B5.02;locus_tag=SCO6042
NC_003888.3	RefSeq	CDS	6633983	6634714	.	+	0	ID=cds5984;Parent=gene6104;Dbxref=Genbank:NP_630152.1,GeneID:1101483;Name=NP_630152.1;Note=SC1B5.02%2C unknown%2C len: 243 aa%3B similar to hypothetical protein downstream of M. tuberculosis HemY%3B TR:P71973 (EMBL:Z80225) MTCY441.45C (296 aa)%2C fasta scores%3B opt: 917 z-score: 1481.6 E(): 0%2C 59.1%25 identity in 237 aa overlap;gbkey=CDS;gene=SC1B5.02;product=hypothetical protein;protein_id=NP_630152.1;transl_table=11
NC_003888.3	RefSeq	gene	6634715	6636346	.	-	.	ID=gene6105;Dbxref=GeneID:1101484;Name=SC1B5.03c;gbkey=Gene;gene=SC1B5.03c;gene_biotype=protein_coding;gene_synonym=SC1B5.03c;locus_tag=SCO6043
NC_003888.3	RefSeq	CDS	6634715	6636346	.	-	0	ID=cds5985;Parent=gene6105;Dbxref=Genbank:NP_630153.1,GeneID:1101484;Name=NP_630153.1;Note=SC1B5.03c%2C probable  protease%2C len: 543 aa%3Bsimilar to e.g. Streptomyces lividans TR:Q54410 (EMBL:L27466) tripeptidylaminopeptidase (537 aa)%2C fasta scores%3B opt: 1839 z-score: 1633.9 E(): 0%2C 51.9%25 identity in 538 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC1B5.03c;product=protease;protein_id=NP_630153.1;transl_table=11
NC_003888.3	RefSeq	gene	6636431	6637228	.	-	.	ID=gene6106;Dbxref=GeneID:1101485;Name=SC1B5.04c;gbkey=Gene;gene=SC1B5.04c;gene_biotype=protein_coding;gene_synonym=SC1B5.04c;locus_tag=SCO6044
NC_003888.3	RefSeq	CDS	6636431	6637228	.	-	0	ID=cds5986;Parent=gene6106;Dbxref=Genbank:NP_630154.1,GeneID:1101485;Name=NP_630154.1;Note=SC1B5.04c%2C possible integral membrane protein%2C len: 265 aa;gbkey=CDS;gene=SC1B5.04c;product=hypothetical protein;protein_id=NP_630154.1;transl_table=11
NC_003888.3	RefSeq	gene	6637343	6638659	.	-	.	ID=gene6107;Dbxref=GeneID:1101486;Name=SC1B5.05c;gbkey=Gene;gene=SC1B5.05c;gene_biotype=protein_coding;gene_synonym=SC1B5.05c;locus_tag=SCO6045
NC_003888.3	RefSeq	CDS	6637343	6638659	.	-	0	ID=cds5987;Parent=gene6107;Dbxref=Genbank:NP_630155.1,GeneID:1101486;Name=NP_630155.1;Note=SC1B5.05c%2C unknown%2C len: 438 aa%3B slight similarity to hypothetical protein from Haemophilus influenzae YG00_HAEIN P44268 (317 aa)%2C fasta scores%3B opt: 252 z-score: 283.4 E(): 1.5e-08%2C 26.8%25 identity in 298 aa overlap;gbkey=CDS;gene=SC1B5.05c;product=hypothetical protein;protein_id=NP_630155.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6638668	6638672	.	-	.	ID=id7974;Note=possible RBS upstream of SC1B5.05c;gbkey=RBS
NC_003888.3	RefSeq	gene	6638803	6639552	.	-	.	ID=gene6108;Dbxref=GeneID:1101487;Name=SC1B5.06c;gbkey=Gene;gene=SC1B5.06c;gene_biotype=protein_coding;gene_synonym=SC1B5.06c;locus_tag=SCO6046
NC_003888.3	RefSeq	CDS	6638803	6639552	.	-	0	ID=cds5988;Parent=gene6108;Dbxref=Genbank:NP_630156.1,GeneID:1101487;Name=NP_630156.1;Note=SC1B5.06c%2C unknown%2C len: 249 aa;gbkey=CDS;gene=SC1B5.06c;product=hypothetical protein;protein_id=NP_630156.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6639582	6639585	.	+	.	ID=id7975;Note=possible RBS upstream of SC1B5.07;gbkey=RBS
NC_003888.3	RefSeq	gene	6639597	6640451	.	+	.	ID=gene6109;Dbxref=GeneID:1101488;Name=SC1B5.07;gbkey=Gene;gene=SC1B5.07;gene_biotype=protein_coding;gene_synonym=SC1B5.07;locus_tag=SCO6047
NC_003888.3	RefSeq	CDS	6639597	6640451	.	+	0	ID=cds5989;Parent=gene6109;Dbxref=Genbank:NP_630157.1,GeneID:1101488;Name=NP_630157.1;Note=SC1B5.07%2C probable ABC-transporter ATP-binding protein%2C len: 284 aa%3B similar to many e.g. NOSF_PSEST P19844 pseudomonas stutzeri copper transport atp-binding protein nosF (308 aa)%2C fasta scores%3B opt: 327 z-score: 381.3 E(): 5.2e-14%2C 30.5%25 identity in 292 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C score 126.83;gbkey=CDS;gene=SC1B5.07;product=ABC transporter ATP-binding protein;protein_id=NP_630157.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6639690	6640199	.	+	.	ID=id7976;Dbxref=GeneID:1101488;Note=Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C score 126.83;gbkey=misc_feature;gene=SC1B5.07
NC_003888.3	RefSeq	sequence_feature	6639711	6639734	.	+	.	ID=id7977;Dbxref=GeneID:1101488;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1B5.07
NC_003888.3	RefSeq	ribosome_entry_site	6640438	6640442	.	+	.	ID=id7978;Dbxref=GeneID:1101488;Note=possible RBS upstream of SC1B5.08;gbkey=RBS;gene=SC1B5.07
NC_003888.3	RefSeq	gene	6640448	6641122	.	+	.	ID=gene6110;Dbxref=GeneID:1101489;Name=SC1B5.08;gbkey=Gene;gene=SC1B5.08;gene_biotype=protein_coding;gene_synonym=SC1B5.08;locus_tag=SCO6048
NC_003888.3	RefSeq	CDS	6640448	6641122	.	+	0	ID=cds5990;Parent=gene6110;Dbxref=Genbank:NP_630158.1,GeneID:1101489;Name=NP_630158.1;Note=SC1B5.08%2C probable integral membrane protein%2C len: 224 aa%3B contains six possible transmembrane domains.;gbkey=CDS;gene=SC1B5.08;product=hypothetical protein;protein_id=NP_630158.1;transl_table=11
NC_003888.3	RefSeq	gene	6641114	6641344	.	-	.	ID=gene6111;Dbxref=GeneID:1101490;Name=SC1B5.09c;gbkey=Gene;gene=SC1B5.09c;gene_biotype=protein_coding;gene_synonym=SC1B5.09c;locus_tag=SCO6049
NC_003888.3	RefSeq	CDS	6641114	6641344	.	-	0	ID=cds5991;Parent=gene6111;Dbxref=Genbank:NP_630159.1,GeneID:1101490;Name=NP_630159.1;Note=SC1B5.09c%2C unknown%2C len: 76 aa;gbkey=CDS;gene=SC1B5.09c;product=hypothetical protein;protein_id=NP_630159.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6641347	6641350	.	-	.	ID=id7979;Note=possible RBS upstream of SC1B5.09c;gbkey=RBS
NC_003888.3	RefSeq	gene	6641362	6642231	.	-	.	ID=gene6112;Dbxref=GeneID:1101491;Name=SC1B5.10c;gbkey=Gene;gene=SC1B5.10c;gene_biotype=protein_coding;gene_synonym=SC1B5.10c;locus_tag=SCO6050
NC_003888.3	RefSeq	CDS	6641362	6642231	.	-	0	ID=cds5992;Parent=gene6112;Dbxref=Genbank:NP_630160.1,GeneID:1101491;Name=NP_630160.1;Note=SC1B5.10c%2C probable lipoprotein%2C len: 289 aa%3B contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC1B5.10c;product=lipoprotein;protein_id=NP_630160.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6642169	6642201	.	-	.	ID=id7980;Dbxref=GeneID:1101491;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC1B5.10c
NC_003888.3	RefSeq	gene	6642322	6643863	.	-	.	ID=gene6113;Dbxref=GeneID:1101492;Name=SC1B5.11c;gbkey=Gene;gene=SC1B5.11c;gene_biotype=protein_coding;gene_synonym=SC1B5.11c;locus_tag=SCO6051
NC_003888.3	RefSeq	CDS	6642322	6643863	.	-	0	ID=cds5993;Parent=gene6113;Dbxref=Genbank:NP_630161.1,GeneID:1101492;Name=NP_630161.1;Note=SC1B5.11c%2C probable iron-sulfur binding oxidoreductase%2C len: 513 aa%3B similar to e.g. ORDL_ECOLI P37906 escherichia coli. probable oxidoreductase (426 aa)%2C fasta scores%3B opt: 303 z-score: 334.4 E(): 2.1e-11%2C 25.4%25 identity in 389 aa overlap. Contains PS00199 and PS00200 Rieske iron-sulfur protein signatures 1 and 2%2C and Pfam match to entry Rieske PF00355%2C Rieske iron-sulfur protein%2C score 49.39;gbkey=CDS;gene=SC1B5.11c;product=iron-sulfur binding oxidoreductase;protein_id=NP_630161.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6642340	6642462	.	-	.	ID=id7981;Dbxref=GeneID:1101492;Note=Pfam match to entry Rieske PF00355%2C Rieske iron-sulfur protein%2C score 49.39;gbkey=misc_feature;gene=SC1B5.11c
NC_003888.3	RefSeq	sequence_feature	6642391	6642408	.	-	.	ID=id7982;Dbxref=GeneID:1101492;Note=PS00200 Rieske iron-sulfur protein signature 2;gbkey=misc_feature;gene=SC1B5.11c
NC_003888.3	RefSeq	sequence_feature	6642442	6642462	.	-	.	ID=id7983;Dbxref=GeneID:1101492;Note=PS00199 Rieske iron-sulfur protein signature 1;gbkey=misc_feature;gene=SC1B5.11c
NC_003888.3	RefSeq	gene	6643915	6645312	.	-	.	ID=gene6114;Dbxref=GeneID:1101493;Name=SC1B5.12c;gbkey=Gene;gene=SC1B5.12c;gene_biotype=protein_coding;gene_synonym=SC1B5.12c;locus_tag=SCO6052
NC_003888.3	RefSeq	CDS	6643915	6645312	.	-	0	ID=cds5994;Parent=gene6114;Dbxref=Genbank:NP_630162.1,GeneID:1101493;Name=NP_630162.1;Note=SC1B5.12c%2C membrane protein%2C len: 495 aa%3B similar to TR:Q9X9W6 (EMBL:AL096743) Streptomyces coelicolor hypothetical protein SCI7.24c%2C 490 aa%3B fasta scores: opt: 1059 Z-score: 1198.3 E(): 4.1e-59%3B 48.081%25 identity in 495 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC1B5.12c;product=hypothetical protein;protein_id=NP_630162.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6645323	6645326	.	-	.	ID=id7984;Note=possible RBS upstream of SC1B5.12c;gbkey=RBS
NC_003888.3	RefSeq	gene	6645402	6646190	.	-	.	ID=gene6115;Dbxref=GeneID:1101494;Name=SC1B5.13c;gbkey=Gene;gene=SC1B5.13c;gene_biotype=protein_coding;gene_synonym=SC1B5.13c;locus_tag=SCO6053
NC_003888.3	RefSeq	CDS	6645402	6646190	.	-	0	ID=cds5995;Parent=gene6115;Dbxref=Genbank:NP_630163.1,GeneID:1101494;Name=NP_630163.1;Note=SC1B5.13c%2C membrane protein%2C len: 262 aa%3B highly similar to many members of the band 7/mec2 family of membrane proteins e.g. BAN7_MOUSE P54116 mus musculus (mouse). erythrocyte band7 protein (stomatin) (284 aa)%2C fasta scores%3B opt: 709 z-score: 1075.9 E(): 0%2C 47.1%25 identity in 223 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC1B5.13c;product=hypothetical protein;protein_id=NP_630163.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6646195	6646201	.	-	.	ID=id7985;Note=possible RBS upstream of SC1B5.13c;gbkey=RBS
NC_003888.3	RefSeq	gene	6646291	6647781	.	-	.	ID=gene6116;Dbxref=GeneID:1101495;Name=SC1B5.14c;gbkey=Gene;gene=SC1B5.14c;gene_biotype=protein_coding;gene_synonym=SC1B5.14c,SC9B1.01c;locus_tag=SCO6054
NC_003888.3	RefSeq	CDS	6646291	6647781	.	-	0	ID=cds5996;Parent=gene6116;Dbxref=Genbank:NP_733685.1,GeneID:1101495;Name=NP_733685.1;Note=SC9B1.01c%2C partial CDS%2C possible integral membrane protein%2C len: >149aa%3B similar to many eg. TR:CAB38499 (EMBL:AL035636) integral membrane protein from Streptomyces coelicolor (830 aa) fasta scores%3B opt: 385%2C z-score: 428.6%2C E(): 1.5e-16%2C (44.7%25 identity in 141 aa overlap). Contains several possible membrane spanning hydrophobic regions.~SC1B5.14c%2C probable transmembrane transport protein%2C partial CDS%2C len: >381 aa%3B similar to hypothetical membrane proteins from many organisms e.g. Mycobacterium tuberculosis TR:P96878 (EMBL:Z92771) MTCY71.13 (764 aa)%2C fasta scores%3B opt: 745 z-score: 768.6 E(): 0%2C 35.9%25 identity in 376 aa overlap and to eukaryotic sulfate transpoters TR:O04001 (EMBL:X96761) Sporobolus stapfianus sulphate transporter (660 aa)%2C opt: 191 z-score: 224.0 E(): 3e-05%2C 22.4%25 identity in 308 aa overlap;gbkey=CDS;gene=SC1B5.14c;product=transmembrane transport protein;protein_id=NP_733685.1;transl_table=11
NC_003888.3	RefSeq	gene	6647790	6648371	.	-	.	ID=gene6117;Dbxref=GeneID:1101496;Name=SC9B1.02c;gbkey=Gene;gene=SC9B1.02c;gene_biotype=protein_coding;gene_synonym=SC9B1.02c;locus_tag=SCO6055
NC_003888.3	RefSeq	CDS	6647790	6648371	.	-	0	ID=cds5997;Parent=gene6117;Dbxref=Genbank:NP_630164.1,GeneID:1101496;Name=NP_630164.1;Note=SC9B1.02c%2C probable carbonic anhydrase%2C len: 193aa%3B similar to many eg. SW:CYNT_ECOLI carbonic anhydrase from Escherichia coli (219 aa) fasta scores%3B opt: 512%2C z-score: 618.8%2C E(): 3.8e-27%2C (43.6%25 identity in 188 aa overlap). Contains two Pfam matches to entry PF00484 Pro_CA%2C Prokaryotic-type carbonic anhydrases and Prosite matches to PS00705 Prokaryotic-type carbonic anhydrases signature 2 and PS00704 Prokaryotic-type carbonic anhydrases signature 1.;gbkey=CDS;gene=SC9B1.02c;product=carbonic anhydrase;protein_id=NP_630164.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6647838	6647942	.	-	.	ID=id7986;Dbxref=GeneID:1101496;Note=Pfam match to entry PF00484 Pro_CA%2C Prokaryotic-type carbonic anhydrases%2C score 31.50%2C E-value 4.7e-08.;gbkey=misc_feature;gene=SC9B1.02c
NC_003888.3	RefSeq	sequence_feature	6648000	6648353	.	-	.	ID=id7987;Dbxref=GeneID:1101496;Note=Pfam match to entry PF00484 Pro_CA%2C Prokaryotic-type carbonic anhydrases%2C score 145.30%2C E-value 4.5e-41.;gbkey=misc_feature;gene=SC9B1.02c
NC_003888.3	RefSeq	sequence_feature	6648078	6648140	.	-	.	ID=id7988;Dbxref=GeneID:1101496;Note=PS00705 Prokaryotic-type carbonic anhydrases signature 2.;gbkey=misc_feature;gene=SC9B1.02c
NC_003888.3	RefSeq	sequence_feature	6648249	6648272	.	-	.	ID=id7989;Dbxref=GeneID:1101496;Note=PS00704 Prokaryotic-type carbonic anhydrases signature 1.;gbkey=misc_feature;gene=SC9B1.02c
NC_003888.3	RefSeq	gene	6648450	6648851	.	-	.	ID=gene6118;Dbxref=GeneID:1101497;Name=SC9B1.03c;gbkey=Gene;gene=SC9B1.03c;gene_biotype=protein_coding;gene_synonym=SC9B1.03c;locus_tag=SCO6056
NC_003888.3	RefSeq	CDS	6648450	6648851	.	-	0	ID=cds5998;Parent=gene6118;Dbxref=Genbank:NP_630165.1,GeneID:1101497;Name=NP_630165.1;Note=SC9B1.03c%2C possible hypothetical protein%2C len: 133aa%3B contains possible N-terminal signal sequence.;gbkey=CDS;gene=SC9B1.03c;product=hypothetical protein;protein_id=NP_630165.1;transl_table=11
NC_003888.3	RefSeq	gene	6649041	6650093	.	-	.	ID=gene6119;Dbxref=GeneID:1101498;Name=SC9B1.04c;gbkey=Gene;gene=SC9B1.04c;gene_biotype=protein_coding;gene_synonym=SC9B1.04c;locus_tag=SCO6057
NC_003888.3	RefSeq	CDS	6649041	6650093	.	-	0	ID=cds5999;Parent=gene6119;Dbxref=Genbank:NP_630166.1,GeneID:1101498;Name=NP_630166.1;Note=SC9B1.04c%2C possible ATP/GTP-binding integral membrane protein%2C len: 350aa%3B similar to hypotheticals eg. TR:P71967 (EMBL:Z80225) from Mycobacterium tuberculosis (369 aa) fasta scores%3B opt: 1129%2C z-score: 1182.3%2C E(): 0%2C (57.8%25 identity in 325 aa overlap). Contains possible membrane spanning hydrophobic regions. Also contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC9B1.04c;product=ATP/GTP-binding integral membrane protein;protein_id=NP_630166.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6649800	6649823	.	-	.	ID=id7990;Dbxref=GeneID:1101498;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC9B1.04c
NC_003888.3	RefSeq	repeat_region	6650197	6650566	.	+	.	ID=id7991;Note=High GC content.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6650674	6651471	.	+	.	ID=gene6120;Dbxref=GeneID:1101499;Name=SC9B1.05;gbkey=Gene;gene=SC9B1.05;gene_biotype=protein_coding;gene_synonym=SC9B1.05;locus_tag=SCO6058
NC_003888.3	RefSeq	CDS	6650674	6651471	.	+	0	ID=cds6000;Parent=gene6120;Dbxref=Genbank:NP_630167.1,GeneID:1101499;Name=NP_630167.1;Note=SC9B1.05%2C possible hydrolase%2C len: 265aa%3B similar to hypotheticals eg. TR:P71968 (EMBL:Z80225) from Mycobacterium tuberculosis (258 aa) fasta scores%3B opt: 536%2C z-score: 585.9%2C E(): 2.6e-25%2C (44.3%25 identity in 235 aa overlap). Also similar to several proposed ribofavin deaminases eg. SW:RIBG_BACAM ribofavin-specific deaminase from Bacillus subtilis (371 aa) fasta scores%3B opt: 157%2C z-score: 177.0%2C E(): 0.015%2C (28.3%25 identity in 180 aa overlap).;gbkey=CDS;gene=SC9B1.05;product=hypothetical protein;protein_id=NP_630167.1;transl_table=11
NC_003888.3	RefSeq	gene	6651616	6652161	.	+	.	ID=gene6121;Dbxref=GeneID:1101500;Name=SC9B1.06;gbkey=Gene;gene=SC9B1.06;gene_biotype=protein_coding;gene_synonym=SC9B1.06;locus_tag=SCO6059
NC_003888.3	RefSeq	CDS	6651616	6652161	.	+	0	ID=cds6001;Parent=gene6121;Dbxref=Genbank:NP_630168.1,GeneID:1101500;Name=NP_630168.1;Note=SC9B1.06%2C unknown%2C len: 181 aa;gbkey=CDS;gene=SC9B1.06;product=hypothetical protein;protein_id=NP_630168.1;transl_table=11
NC_003888.3	RefSeq	gene	6652235	6653623	.	+	.	ID=gene6122;Dbxref=GeneID:1101501;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;gene_synonym=murC,SC9B1.07;locus_tag=SCO6060
NC_003888.3	RefSeq	CDS	6652235	6653623	.	+	0	ID=cds6002;Parent=gene6122;Dbxref=Genbank:NP_630169.1,GeneID:1101501;Name=NP_630169.1;Note=SC9B1.07%2C murC%2C possible UDP-N-acetylmuramoyl-L-alanine ligase%2C len: 485 aa%3B similar to many e.g. SW:MURC_ECOLI UDP-N-acetylmuramoyl-L-alanine ligase from Escherichia coli (491 aa) fasta scores%3B opt: 750%2C z-score: 785.9%2C E(): 0%2C (40.4%25 identity in 463 aa overlap).;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramoyl-L-alanine ligase;protein_id=NP_630169.1;transl_table=11
NC_003888.3	RefSeq	gene	6653637	6654044	.	+	.	ID=gene6123;Dbxref=GeneID:1101502;Name=SC9B1.08;gbkey=Gene;gene=SC9B1.08;gene_biotype=protein_coding;gene_synonym=SC9B1.08;locus_tag=SCO6061
NC_003888.3	RefSeq	CDS	6653637	6654044	.	+	0	ID=cds6003;Parent=gene6123;Dbxref=Genbank:NP_630170.1,GeneID:1101502;Name=NP_630170.1;Note=SC9B1.08%2C possible oxidoreductase%2C len: 135aa%3B highly conserved in prokaryotes and eukaryotes eg. TR:P71971 (EMBL:Z80225) from Mycobacterium tuberculosis (136 aa) fasta scores%3B opt: 653%2C z-score: 835.9%2C E(): 0%2C (71.1%25 identity in 128 aa overlap) and TR:CAB40164 (EMBL:AL049558) from Schizosaccharomyces pombe (138 aa) fasta scores%3B opt: 475%2C z-score: 612.0%2C E(): 9e-27%2C (48.1%25 identity in 135 aa overlap). Also similar to SW:PMSR_STRPN Peptide methionine sulfoxide reductase from Streptococcus pneumoniae (312 aa) fasta scores%3B opt: 331%2C z-score: 426.0%2C E(): 2.1e-16%2C (46.2%25 identity in 132 aa overlap).;gbkey=CDS;gene=SC9B1.08;product=oxidoreductase;protein_id=NP_630170.1;transl_table=11
NC_003888.3	RefSeq	gene	6654298	6655458	.	+	.	ID=gene6124;Dbxref=GeneID:1101503;Name=SC9B1.09;gbkey=Gene;gene=SC9B1.09;gene_biotype=protein_coding;gene_synonym=SC9B1.09;locus_tag=SCO6062
NC_003888.3	RefSeq	CDS	6654298	6655458	.	+	0	ID=cds6004;Parent=gene6124;Dbxref=Genbank:NP_630171.1,GeneID:1101503;Name=NP_630171.1;Note=SC9B1.09%2C ABC transporter ATP-binding subunit%2C len: 386aa%3B similar to many eg. TR:O69724 (EMBL:AL022121) ABC transporter ATP-binding subunit from Mycobacterium tuberculosis (376 aa) fasta scores%3B opt: 1147%2C z-score: 1185.4%2C E(): 0%2C (51.2%25 identity in 371 aa overlap) and SW:PROV_BACSU glycine/betaine/L-proline transport ATP-binding protein (404 aa) fasta scores%3B opt: 849%2C z-score: 879.1%2C E(): 0%2C (39.8%25 identity in 359 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature.;gbkey=CDS;gene=SC9B1.09;product=ABC transporter ATP-binding protein;protein_id=NP_630171.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6654370	6654924	.	+	.	ID=id7992;Dbxref=GeneID:1101503;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 229.30%2C E-value 5.7e-65.;gbkey=misc_feature;gene=SC9B1.09
NC_003888.3	RefSeq	sequence_feature	6654391	6654414	.	+	.	ID=id7993;Dbxref=GeneID:1101503;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC9B1.09
NC_003888.3	RefSeq	sequence_feature	6654694	6654738	.	+	.	ID=id7994;Dbxref=GeneID:1101503;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC9B1.09
NC_003888.3	RefSeq	gene	6655455	6656168	.	+	.	ID=gene6125;Dbxref=GeneID:1101504;Name=SC9B1.10;gbkey=Gene;gene=SC9B1.10;gene_biotype=protein_coding;gene_synonym=SC9B1.10;locus_tag=SCO6063
NC_003888.3	RefSeq	CDS	6655455	6656168	.	+	0	ID=cds6005;Parent=gene6125;Dbxref=Genbank:NP_630172.1,GeneID:1101504;Name=NP_630172.1;Note=SC9B1.10%2C probable ABC transport permease%2C len: 237aa%3B similar to many eg. TR:O69723 (EMBL:AL022121) transport system permease from Mycobacterium tuberculosis (229 aa) fasta scores%3B opt: 436%2C z-score: 523.9%2C E(): 7.4e-22%2C (36.4%25 identity in 214 aa overlap) and SW:PROZ_BACSU glycine/betaine/L-proline transport permease from Bacillus subtilis (223 aa) fasta scores%3B opt: 291%2C z-score: 353.3%2C E(): 2.3e-12%2C (29.1%25 identity in 199 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=CDS;gene=SC9B1.10;product=ABC transporter permease;protein_id=NP_630172.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6655761	6655976	.	+	.	ID=id7995;Dbxref=GeneID:1101504;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 35.30%2C E-value 1.4e-06.;gbkey=misc_feature;gene=SC9B1.10
NC_003888.3	RefSeq	gene	6656165	6656830	.	+	.	ID=gene6126;Dbxref=GeneID:1101505;Name=SC9B1.11;gbkey=Gene;gene=SC9B1.11;gene_biotype=protein_coding;gene_synonym=SC9B1.11;locus_tag=SCO6064
NC_003888.3	RefSeq	CDS	6656165	6656830	.	+	0	ID=cds6006;Parent=gene6126;Dbxref=Genbank:NP_630173.1,GeneID:1101505;Name=NP_630173.1;gbkey=CDS;gene=SC9B1.11;product=ABC transporter permease;protein_id=NP_630173.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6656495	6656707	.	+	.	ID=id7996;Dbxref=GeneID:1101505;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 50.70%2C E-value 3.3e-11.;gbkey=misc_feature;gene=SC9B1.11
NC_003888.3	RefSeq	gene	6656904	6657866	.	+	.	ID=gene6127;Dbxref=GeneID:1101506;Name=SC9B1.12;gbkey=Gene;gene=SC9B1.12;gene_biotype=protein_coding;gene_synonym=SC9B1.12;locus_tag=SCO6065
NC_003888.3	RefSeq	CDS	6656904	6657866	.	+	0	ID=cds6007;Parent=gene6127;Dbxref=Genbank:NP_630174.1,GeneID:1101506;Name=NP_630174.1;Note=SC9B1.12%2C probable  substrate-binding protein%2C len: 320aa%3B similar to many eg. TR:O69725 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (315 aa) fasta scores%3B opt: 574%2C z-score: 637.7%2C E(): 3.4e-28%2C (35.8%25 identity in 313 aa overlap) and SW:PROX_BACSU glycine/betaine/L-proline binding protein from Bacillus subtilis (313 aa) fasta scores%3B opt: 136%2C z-score: 157.8%2C E(): 0.18%2C (25.7%25 identity in 311 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SC9B1.12;product=substrate-binding protein;protein_id=NP_630174.1;transl_table=11
NC_003888.3	RefSeq	gene	6657898	6658443	.	-	.	ID=gene6128;Dbxref=GeneID:1101507;Name=cvnD6;gbkey=Gene;gene=cvnD6;gene_biotype=protein_coding;gene_synonym=cvnD6,SC9B1.13c;locus_tag=SCO6066
NC_003888.3	RefSeq	CDS	6657898	6658443	.	-	0	ID=cds6008;Parent=gene6128;Dbxref=Genbank:NP_630175.1,GeneID:1101507;Name=NP_630175.1;Note=SC9B1.13c%2C cvnD6%2C possible ATP/GTP-binding protein%2C len: 181aa%3B similar to others egs. TR:O50391 (EMBL:AL009198) hypothetical protein from Mycobacterium tuberculosis (193 aa) fasta scores%3B opt: 689%2C z-score: 849.1%2C E(): 0%2C (61.4%25 identity in 166 aa overlap) and two  ATP/GTP-binding proteins from Streptomyces coelicolor: TR:O86519 (EMBL:AL031124) (174 aa) fasta scores%3B opt: 665%2C z-score: 820.6%2C E(): 0%2C (55.0%25 identity in 171 aa overlap) and TR:CAA19989 (EMBL:AL031124) (174 aa) fasta scores%3B opt: 662%2C z-score: 817.0%2C E(): 0%2C (55.6%25 identity in 171 aa overlap). Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=cvnD6;product=ATP/GTP-binding protein;protein_id=NP_630175.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6658402	6658425	.	-	.	ID=id7997;Dbxref=GeneID:1101507;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cvnD6
NC_003888.3	RefSeq	gene	6658496	6658855	.	-	.	ID=gene6129;Dbxref=GeneID:1101508;Name=cvnC6;gbkey=Gene;gene=cvnC6;gene_biotype=protein_coding;gene_synonym=cvnC6,SC9B1.14c;locus_tag=SCO6067
NC_003888.3	RefSeq	CDS	6658496	6658855	.	-	0	ID=cds6009;Parent=gene6129;Dbxref=Genbank:NP_630176.1,GeneID:1101508;Name=NP_630176.1;Note=SC9B1.14c%2C cvnC6%2C unknown%2C len: 119 aa%3B similar to other hypothetical proteins egs. two from Streptomyces coelicolor: TR:O86520 (EMBL:AL031124) (190 aa) fasta scores%3B opt: 242%2C z-score: 321.0%2C E(): 1.5e-10%2C (39.8%25 identity in 118 aa overlap) and TR:O86523 (EMBL:AL031124) (132 aa) fasta scores%3B opt: 228%2C z-score: 305.7%2C E(): 1e-09%2C (39.3%25 identity in 112 aa overlap)%2C and TR:O50392 (EMBL:AL009198) from Mycobacterium tuberculosis (122 aa) fasta scores%3B opt: 188%2C z-score: 255.2%2C E(): 6.8e-07%2C (37.5%25 identity in 120 aa overlap).;gbkey=CDS;gene=cvnC6;product=hypothetical protein;protein_id=NP_630176.1;transl_table=11
NC_003888.3	RefSeq	gene	6658857	6659276	.	-	.	ID=gene6130;Dbxref=GeneID:1101509;Name=cvnB6;gbkey=Gene;gene=cvnB6;gene_biotype=protein_coding;gene_synonym=cvnB6,SC9B1.15c;locus_tag=SCO6068
NC_003888.3	RefSeq	CDS	6658857	6659276	.	-	0	ID=cds6010;Parent=gene6130;Dbxref=Genbank:NP_630177.1,GeneID:1101509;Name=NP_630177.1;Note=SC9B1.15c%2C cvnB6%2C unknown%2C len: 119 aa%3B similar to other hypothetical proteins egs. two from Streptomyces coelicolor: TR:O86521 (EMBL:AL031124) (140 aa) fasta scores%3B opt: 331%2C z-score: 424.2%2C E(): 2.6e-16%2C (41.5%25 identity in 130 aa overlap) and TR:O86524 (EMBL:AL031124) (137 aa) fasta scores%3B opt: 325%2C z-score: 416.9%2C E(): 6.7e-16%2C (44.3%25 identity in 122 aa overlap)%2C and TR:O50393 (EMBL:AL009198) from Mycobacterium tuberculosis (130 aa) fasta scores%3B opt: 282%2C z-score: 364.1%2C E(): 5.8e-13%2C (39.1%25 identity in 115 aa overlap).;gbkey=CDS;gene=cvnB6;product=hypothetical protein;protein_id=NP_630177.1;transl_table=11
NC_003888.3	RefSeq	gene	6659273	6661906	.	-	.	ID=gene6131;Dbxref=GeneID:1101510;Name=cvnA6;gbkey=Gene;gene=cvnA6;gene_biotype=protein_coding;gene_synonym=cvnA6,SC9B1.16c;locus_tag=SCO6069
NC_003888.3	RefSeq	CDS	6659273	6661906	.	-	0	ID=cds6011;Parent=gene6131;Dbxref=Genbank:NP_630178.1,GeneID:1101510;Name=NP_630178.1;Note=SC9B1.16c%2C cvnA6%2C possible large hypothetical protein%2C len: 877aa%3B similar to two neighbouring hypothetical proteins from Streptomyces coelicolor TR:O86525 (EMBL:AL031124) (1329 aa) fasta scores%3B opt: 1056%2C z-score: 919.5%2C E(): 0%2C (30.4%25 identity in 891 aa overlap) TR:O86522 (EMBL:AL031124) (1111 aa) fasta scores%3B opt: 804%2C z-score: 701.8%2C E(): 9e-32%2C (28.4%25 identity in 849 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=cvnA6;product=large hypothetical protein;protein_id=NP_630178.1;transl_table=11
NC_003888.3	RefSeq	gene	6661975	6662988	.	-	.	ID=gene6132;Dbxref=GeneID:1101511;Name=SC9B1.17c;gbkey=Gene;gene=SC9B1.17c;gene_biotype=protein_coding;gene_synonym=SC9B1.17c;locus_tag=SCO6070
NC_003888.3	RefSeq	CDS	6661975	6662988	.	-	0	ID=cds6012;Parent=gene6132;Dbxref=Genbank:NP_630179.1,GeneID:1101511;Name=NP_630179.1;Note=SC9B1.17c%2C possible  solute binding protein%2C len: 337aa%3B similarity to many eg. SW:RBSB_BACSU D-ribose binding protein from Bacillus subtilis (305 aa) fasta scores%3B opt: 251%2C z-score: 270.5%2C E(): 9.6e-08%2C (26.4%25 identity in 288 aa overlap). Contains possible N-terminal signal sequence and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC9B1.17c;product=solute binding protein;protein_id=NP_630179.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6662899	6662931	.	-	.	ID=id7998;Dbxref=GeneID:1101511;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SC9B1.17c
NC_003888.3	RefSeq	gene	6663344	6663991	.	+	.	ID=gene6133;Dbxref=GeneID:1101512;Name=cprB;gbkey=Gene;gene=cprB;gene_biotype=protein_coding;gene_synonym=cprB,SC9B1.18;locus_tag=SCO6071
NC_003888.3	RefSeq	CDS	6663344	6663991	.	+	0	ID=cds6013;Parent=gene6133;Dbxref=Genbank:NP_630180.1,GeneID:1101512;Name=NP_630180.1;Note=SC9B1.18%2C cprB%2C A-factor receptor homolog%2C len: 215 aa%3B previously sequenced therefore identical to TR:O66122 (EMBL:AB000385) CprB%2C A-factor receptor homolog from Streptomyces coelicolor. Also similar to many others from Actinomycetes e.g. TR:Q54189 (EMBL:D49782) A-factor receptor from Streptomyces griseus (276 aa) fasta scores%3B opt: 315%2C z-score: 392.1%2C E(): 1.6e-14%2C (36.5%25 identity in 219 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=CDS;gene=cprB;product=A-factor receptor-like protein;protein_id=NP_630180.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6663383	6663523	.	+	.	ID=id7999;Dbxref=GeneID:1101512;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 65.00%2C E-value 2.8e-16.;gbkey=misc_feature;gene=cprB
NC_003888.3	RefSeq	gene	6664069	6666069	.	+	.	ID=gene6134;Dbxref=GeneID:1101513;Name=SC9B1.19;gbkey=Gene;gene=SC9B1.19;gene_biotype=protein_coding;gene_synonym=SC9B1.19;locus_tag=SCO6072
NC_003888.3	RefSeq	CDS	6664069	6666069	.	+	0	ID=cds6014;Parent=gene6134;Dbxref=Genbank:NP_630181.1,GeneID:1101513;Name=NP_630181.1;Note=SC9B1.19%2C unknown%2C len: 666aa%3B similar to many hypothetical proteins from eukaryotes eg. TR:O45417 (EMBL:Z92832) from Caenorhabditis elegans (450 aa) fasta scores%3B opt: 395%2C z-score: 410.1%2C E(): 1.6e-15%2C (28.0%25 identity in 447 aa overlap).;gbkey=CDS;gene=SC9B1.19;product=hypothetical protein;protein_id=NP_630181.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6664165	6664737	.	+	.	ID=id8000;Dbxref=GeneID:1101513;Note=Complex repeat region which appears to translate into two pairs of repeated domains (17071-17163 and 17161-17403) in SC9B1.19. Each of these domains appears to contains smaller degenerate repeats.;gbkey=repeat_region;gene=SC9B1.19
NC_003888.3	RefSeq	gene	6666219	6668399	.	+	.	ID=gene6135;Dbxref=GeneID:1101514;Name=SC9B1.20;gbkey=Gene;gene=SC9B1.20;gene_biotype=protein_coding;gene_synonym=SC9B1.20;locus_tag=SCO6073
NC_003888.3	RefSeq	CDS	6666219	6668399	.	+	0	ID=cds6015;Parent=gene6135;Dbxref=Genbank:NP_630182.1,GeneID:1101514;Name=NP_630182.1;Note=SC9B1.20%2C possible cyclase%2C len: 726 aa%3B C-terminal region similar to SW:PTLS_STRSQ pentalenene synthase from Streptomyces UC5319 (336 aa) fasta scores%3B opt: 382%2C z-score: 446.4%2C E(): 1.5e-17%2C (28.9%25 identity in 339 aa overlap).;gbkey=CDS;gene=SC9B1.20;product=cyclase;protein_id=NP_630182.1;transl_table=11
NC_003888.3	RefSeq	gene	6668513	6669124	.	+	.	ID=gene6136;Dbxref=GeneID:1101515;Name=SC9B1.21;gbkey=Gene;gene=SC9B1.21;gene_biotype=protein_coding;gene_synonym=SC9B1.21;locus_tag=SCO6074
NC_003888.3	RefSeq	CDS	6668513	6669124	.	+	0	ID=cds6016;Parent=gene6136;Dbxref=Genbank:NP_630183.1,GeneID:1101515;Name=NP_630183.1;Note=SC9B1.21%2C possible integral membrane protein%2C len: 203aa%3B some similarity to eukaryotic hypothetical proteins eg. TR:Q22260 (EMBL:Z70756) (290 aa) fasta scores%3B opt: 185%2C z-score: 170.7%2C E(): 0.035%2C (34.4%25 identity in 157 aa overlap). Also similar to TR:CAA22418 (EMBL:AL034447) transmembrane protein from Streptomyces coelicolor (396 aa) fasta scores%3B opt: 186%2C z-score: 169.8%2C E(): 0.039%2C (33.1%25 identity in 166 aa overlap).;gbkey=CDS;gene=SC9B1.21;product=hypothetical protein;protein_id=NP_630183.1;transl_table=11
NC_003888.3	RefSeq	gene	6669117	6669938	.	-	.	ID=gene6137;Dbxref=GeneID:1101516;Name=SC9B1.22c;gbkey=Gene;gene=SC9B1.22c;gene_biotype=protein_coding;gene_synonym=SC9B1.22c;locus_tag=SCO6075
NC_003888.3	RefSeq	CDS	6669117	6669938	.	-	0	ID=cds6017;Parent=gene6137;Dbxref=Genbank:NP_630184.1,GeneID:1101516;Name=NP_630184.1;Note=SC9B1.22c%2C unknown%2C len: 273aa%3B similar to many hypothetical proteins eg. TR:O06629 (EMBL:Z95618) from Mycobacterium tuberculosis (318 aa) fasta scores%3B opt: 353%2C z-score: 408.1%2C E(): 2.1e-15%2C (32.5%25 identity in 252 aa overlap).;gbkey=CDS;gene=SC9B1.22c;product=hypothetical protein;protein_id=NP_630184.1;transl_table=11
NC_003888.3	RefSeq	gene	6670057	6671187	.	+	.	ID=gene6138;Dbxref=GeneID:1101517;Name=SC9B1.23;gbkey=Gene;gene=SC9B1.23;gene_biotype=protein_coding;gene_synonym=SC9B1.23;locus_tag=SCO6076
NC_003888.3	RefSeq	CDS	6670057	6671187	.	+	0	ID=cds6018;Parent=gene6138;Dbxref=Genbank:NP_630185.1,GeneID:1101517;Name=NP_630185.1;Note=SC9B1.23%2C probable dipeptidase%2C len: 376aa%3B similar to many eg. SW:PEPQ_LACDL proline dipeptidase from Lactobacillus delbrueckii subsp. lactis DSM7290 (368 aa) fasta scores%3B opt: 681%2C z-score: 740.0%2C E(): 0%2C (34.6%25 identity in 353 aa overlap).;gbkey=CDS;gene=SC9B1.23;product=dipeptidase;protein_id=NP_630185.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6670501	6671184	.	+	.	ID=id8001;Dbxref=GeneID:1101517;Note=Pfam match to entry PF00557 pep_M24%2C metallopeptidase family M24%2C score 192.90%2C E-value 5.2e-54.;gbkey=misc_feature;gene=SC9B1.23
NC_003888.3	RefSeq	gene	6671184	6672188	.	+	.	ID=gene6139;Dbxref=GeneID:1101518;Name=SC9B1.24;gbkey=Gene;gene=SC9B1.24;gene_biotype=protein_coding;gene_synonym=SC9B1.24,SCBAC1A6.01;locus_tag=SCO6077
NC_003888.3	RefSeq	CDS	6671184	6672188	.	+	0	ID=cds6019;Parent=gene6139;Dbxref=Genbank:NP_733686.1,GeneID:1101518;Name=NP_733686.1;Note=SCBAC1A6.01%2C unknown (fragment)%2C len: >60 aa~SC9B1.24%2C partial CDS%2C possible transferase%2C len: >317aa%3B similarity to many antibiotic resistance phosphotransferases eg. TR:Q47396 (EMBL:D16251) macrolide 2'-phosphotransferase I from Escherichia coli (301 aa) fasta scores%3B opt: 197%2C z-score: 224.6%2C E(): 3.4e-05%2C (26.9%25 identity in 201 aa overlap) and SW:VPH_STRVI viomycin phosphotransferase from Streptomyces vinaceus (287 aa) fasta scores%3B opt: 194%2C z-score: 221.6%2C E(): 5e-05%2C (28.8%25 identity in 257 aa overlap).;gbkey=CDS;gene=SC9B1.24;product=transferase;protein_id=NP_733686.1;transl_table=11
NC_003888.3	RefSeq	gene	6672199	6673944	.	-	.	ID=gene6140;Dbxref=GeneID:1101519;Name=SCBAC1A6.02c;gbkey=Gene;gene=SCBAC1A6.02c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.02c;locus_tag=SCO6078
NC_003888.3	RefSeq	CDS	6672199	6673944	.	-	0	ID=cds6020;Parent=gene6140;Dbxref=Genbank:NP_630186.1,GeneID:1101519;Name=NP_630186.1;Note=SCBAC1A6.02c%2C probable alpha amylase%2C len: 581 aa%3B highly similar to TR:Q44316 (EMBL:D63343) Arthrobacter sp. maltooligosyl trehalose trehalohydrolase TreZ%2C 598 aa%3B fasta scores: opt: 2063 z-score: 2298.1 E(): 0%3B 53.3%25 identity in 583 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase;gbkey=CDS;gene=SCBAC1A6.02c;product=alpha amylase;protein_id=NP_630186.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6672277	6673662	.	-	.	ID=id8002;Dbxref=GeneID:1101519;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score -23.30%2C E-value 2.5e-05;gbkey=misc_feature;gene=SCBAC1A6.02c
NC_003888.3	RefSeq	gene	6674122	6674673	.	+	.	ID=gene6141;Dbxref=GeneID:1101520;Name=SCBAC1A6.03;gbkey=Gene;gene=SCBAC1A6.03;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.03;locus_tag=SCO6079
NC_003888.3	RefSeq	CDS	6674122	6674673	.	+	0	ID=cds6021;Parent=gene6141;Dbxref=Genbank:NP_630187.1,GeneID:1101520;Name=NP_630187.1;Note=SCBAC1A6.03%2C conserved hypothetical protein%2C len: 183 aa%3B similar to TR:Q9RP36 (EMBL:AF173844) Mycobacterium smegmatis signal transduction protein GarA%2C 158 aa%3B fasta scores: opt: 185 z-score: 231.8 E(): 2.5e-05%3B 36.4%25 identity in 143 aa overlap. Contains Pfam match to entry PF00498 FHA%2C FHA domain;gbkey=CDS;gene=SCBAC1A6.03;product=hypothetical protein;protein_id=NP_630187.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6674449	6674643	.	+	.	ID=id8003;Dbxref=GeneID:1101520;Note=Pfam match to entry PF00498 FHA%2C FHA domain%2C score 74.90%2C E-value 1.7e-18;gbkey=misc_feature;gene=SCBAC1A6.03
NC_003888.3	RefSeq	gene	6675067	6676224	.	+	.	ID=gene6142;Dbxref=GeneID:1101521;Name=SCBAC1A6.04;gbkey=Gene;gene=SCBAC1A6.04;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.04;locus_tag=SCO6080
NC_003888.3	RefSeq	CDS	6675067	6676224	.	+	0	ID=cds6022;Parent=gene6142;Dbxref=Genbank:NP_630188.1,GeneID:1101521;Name=NP_630188.1;Note=SCBAC1A6.04%2C possible dehydrogenase%2C len: 385 aa%3B similar to TR:Q53924 (EMBL:X62373) Streptomyces coelicolor hydroxylacyl-CoA dehydrogenase ORFB%2C 394 aa%3B fasta scores: opt: 835 z-score: 981.3 E(): 0%3B 42.0%25 identity in 381 aa overlap;gbkey=CDS;gene=SCBAC1A6.04;product=dehydrogenase;protein_id=NP_630188.1;transl_table=11
NC_003888.3	RefSeq	gene	6676232	6678649	.	-	.	ID=gene6143;Dbxref=GeneID:1101522;Name=SCBAC1A6.05c;gbkey=Gene;gene=SCBAC1A6.05c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.05c;locus_tag=SCO6081
NC_003888.3	RefSeq	CDS	6676232	6678649	.	-	0	ID=cds6023;Parent=gene6143;Dbxref=Genbank:NP_630189.1,GeneID:1101522;Name=NP_630189.1;Note=SCBAC1A6.05c%2C probable alpha amylase%2C len: 805 aa%3B similar to TR:Q53237 (EMBL:D78001) Rhizobium sp. maltooligosyl trehalose synthase TreY%2C 772 aa%3B fasta scores: opt: 1007 z-score: 1085.4 E(): 0%3B 42.8%25 identity in 797 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase;gbkey=CDS;gene=SCBAC1A6.05c;product=alpha amylase;protein_id=NP_630189.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6677201	6678598	.	-	.	ID=id8004;Dbxref=GeneID:1101522;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score -74.90%2C E-value 0.0036;gbkey=misc_feature;gene=SCBAC1A6.05c
NC_003888.3	RefSeq	gene	6678718	6680826	.	-	.	ID=gene6144;Dbxref=GeneID:1101523;Name=glgX3;gbkey=Gene;gene=glgX3;gene_biotype=protein_coding;gene_synonym=glgX3,SCBAC1A6.06c;locus_tag=SCO6082
NC_003888.3	RefSeq	CDS	6678718	6680826	.	-	0	ID=cds6024;Parent=gene6144;Dbxref=Genbank:NP_630190.1,GeneID:1101523;Name=NP_630190.1;Note=SCBAC1A6.06c%2C glgX3%2C glycogen debranching enzyme%2C len: 702 aa%3B similar to SW:GLGX_ECOLI (EMBL:J01616) Escherichia coli glycogen operon protein GlgX or GlyX (EC 3.2.1.*)%2C 657 aa%3B fasta scores: opt: 1883 z-score: 2219.2 E(): 0%3B 45.5%25 identity in 664 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase;gbkey=CDS;gene=glgX3;product=glycogen debranching protein;protein_id=NP_630190.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6679006	6680364	.	-	.	ID=id8005;Dbxref=GeneID:1101523;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score -7.80%2C E-value 5.6e-06;gbkey=misc_feature;gene=glgX3
NC_003888.3	RefSeq	gene	6681383	6682630	.	+	.	ID=gene6145;Dbxref=GeneID:1101524;Name=SCBAC1A6.07;gbkey=Gene;gene=SCBAC1A6.07;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.07;locus_tag=SCO6083
NC_003888.3	RefSeq	CDS	6681383	6682630	.	+	0	ID=cds6025;Parent=gene6145;Dbxref=Genbank:NP_630191.1,GeneID:1101524;Name=NP_630191.1;Note=SCBAC1A6.07%2C unknown%2C len: 415 aa;gbkey=CDS;gene=SCBAC1A6.07;product=hypothetical protein;protein_id=NP_630191.1;transl_table=11
NC_003888.3	RefSeq	gene	6682745	6683479	.	+	.	ID=gene6146;Dbxref=GeneID:1101525;Name=SCBAC1A6.08;gbkey=Gene;gene=SCBAC1A6.08;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.08;locus_tag=SCO6084
NC_003888.3	RefSeq	CDS	6682745	6683479	.	+	0	ID=cds6026;Parent=gene6146;Dbxref=Genbank:NP_630192.1,GeneID:1101525;Name=NP_630192.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;gene=SCBAC1A6.08;product=DNA polymerase III subunit epsilon;protein_id=NP_630192.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6682766	6683305	.	+	.	ID=id8006;Dbxref=GeneID:1101525;Note=Pfam match to entry PF00929 Exonuclease%2C Exonuclease%2C score 73.50%2C E-value 4.3e-18;gbkey=misc_feature;gene=SCBAC1A6.08
NC_003888.3	RefSeq	gene	6683518	6684384	.	-	.	ID=gene6147;Dbxref=GeneID:1101526;Name=SCBAC1A6.09c;gbkey=Gene;gene=SCBAC1A6.09c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.09c;locus_tag=SCO6085
NC_003888.3	RefSeq	CDS	6683518	6684384	.	-	0	ID=cds6027;Parent=gene6147;Dbxref=Genbank:NP_630193.1,GeneID:1101526;Name=NP_630193.1;Note=SCBAC1A6.09c%2C hypothetical protein%2C len: 288 aa%3B similar to TR:Q9KZD8 (EMBL:AL353870) Streptomyces coelicolor hypothetical 32.2 kDa protein SC6F7.04%2C 293 aa%3B fasta scores: opt: 459 z-score: 531.9 E(): 4.7e-22%3B 36.5%25 identity in 293 aa overlap;gbkey=CDS;gene=SCBAC1A6.09c;product=hypothetical protein;protein_id=NP_630193.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6684394	6684398	.	-	.	ID=id8007;gbkey=RBS
NC_003888.3	RefSeq	gene	6684546	6685493	.	+	.	ID=gene6148;Dbxref=GeneID:1101527;Name=SCBAC1A6.10;gbkey=Gene;gene=SCBAC1A6.10;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.10;locus_tag=SCO6086
NC_003888.3	RefSeq	CDS	6684546	6685493	.	+	0	ID=cds6028;Parent=gene6148;Dbxref=Genbank:NP_630194.1,GeneID:1101527;Name=NP_630194.1;Note=SCBAC1A6.10%2C probable transport system integral membrane protein%2C len: 315 aa%3B similar to TR:P73352 (EMBL:D90905) Synechocystis sp. lactose transport system permease LacF%2C 298 aa%3B fasta scores: opt: 630 z-score: 734.0 E(): 0%3B 38.6%25 identity in 298 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC1A6.10;product=transport system integral membrane protein;protein_id=NP_630194.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6685134	6685367	.	+	.	ID=id8008;Dbxref=GeneID:1101527;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 72.80%2C E-value 7.3e-18;gbkey=misc_feature;gene=SCBAC1A6.10
NC_003888.3	RefSeq	gene	6685490	6686323	.	+	.	ID=gene6149;Dbxref=GeneID:1101528;Name=SCBAC1A6.11;gbkey=Gene;gene=SCBAC1A6.11;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.11;locus_tag=SCO6087
NC_003888.3	RefSeq	CDS	6685490	6686323	.	+	0	ID=cds6029;Parent=gene6149;Dbxref=Genbank:NP_630195.1,GeneID:1101528;Name=NP_630195.1;Note=SCBAC1A6.11%2C probable transport system integral membrane protein%2C len: 277 aa%3B similar to TR:Q9L1V0 (EMBL:AL138851) Streptomyces coelicolor sugar transporter inner membrane protein SCE59.03c%2C 281 aa%3B fasta scores: opt: 661 z-score: 794.5 E(): 0%3B 42.2%25 identity in 268 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC1A6.11;product=transport system integral membrane protein;protein_id=NP_630195.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6685967	6686191	.	+	.	ID=id8009;Dbxref=GeneID:1101528;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 61.90%2C E-value 1.4e-14;gbkey=misc_feature;gene=SCBAC1A6.11
NC_003888.3	RefSeq	gene	6686323	6687615	.	+	.	ID=gene6150;Dbxref=GeneID:1101529;Name=SCBAC1A6.12;gbkey=Gene;gene=SCBAC1A6.12;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.12;locus_tag=SCO6088
NC_003888.3	RefSeq	CDS	6686323	6687615	.	+	0	ID=cds6030;Parent=gene6150;Dbxref=Genbank:NP_630196.1,GeneID:1101529;Name=NP_630196.1;Note=SCBAC1A6.12%2C possible solute-binding transport protein%2C len: 430 aa%3B similar to TR:Q9PAP7 (EMBL:AE004053) Xylella fastidiosa ABC transporter sugar-binding protein XF2448%2C 430 aa%3B fasta scores: opt: 351 z-score: 392.9 E(): 2.6e-14%3B 26.2%25 identity in 428 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and properly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC1A6.12;product=solute-binding transport protein;protein_id=NP_630196.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6686356	6686388	.	+	.	ID=id8010;Dbxref=GeneID:1101529;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCBAC1A6.12
NC_003888.3	RefSeq	sequence_feature	6686731	6687579	.	+	.	ID=id8011;Dbxref=GeneID:1101529;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 140.00%2C E-value 2.7e-38;gbkey=misc_feature;gene=SCBAC1A6.12
NC_003888.3	RefSeq	ribosome_entry_site	6687912	6687916	.	+	.	ID=id8012;gbkey=RBS
NC_003888.3	RefSeq	gene	6687926	6688708	.	+	.	ID=gene6151;Dbxref=GeneID:1101530;Name=SCBAC1A6.13;gbkey=Gene;gene=SCBAC1A6.13;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.13;locus_tag=SCO6089
NC_003888.3	RefSeq	CDS	6687926	6688708	.	+	0	ID=cds6031;Parent=gene6151;Dbxref=Genbank:NP_630197.1,GeneID:1101530;Name=NP_630197.1;Note=SCBAC1A6.13%2C antibiotic resistance rRNA adenine methyltransferase%2C len: 260 aa%3B identical to TR:Q54386 (EMBL:M74717) Streptomyces lividans lincomycin resistance methylase Lrm%2C 260 aa and similar to many other macrolide antibiotic resistance proteins%2C e.g. SW:ERMS_STRFR (EMBL:M19269) Streptomyces fradiae rRNA adenine N-6-methyltransferase (EC 2.1.1.48) ErmSF%2C 319 aa%3B fasta scores: opt: 1003 z-score: 1217.4 E(): 0%3B 64.2%25 identity in 257 aa overlap. Contains Pfam match to entry PF00398 RrnaAD%2C Ribosomal RNA adenine dimethylase and match to Prosite entry PS01131 Ribosomal RNA adenine dimethylases signature;gbkey=CDS;gene=SCBAC1A6.13;product=antibiotic resistance rRNA adenine methyltransferase;protein_id=NP_630197.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6687962	6688693	.	+	.	ID=id8013;Dbxref=GeneID:1101530;Note=Pfam match to entry PF00398 RrnaAD%2C Ribosomal RNA adenine dimethylases%2C score 348.10%2C E-value 1.4e-107;gbkey=misc_feature;gene=SCBAC1A6.13
NC_003888.3	RefSeq	sequence_feature	6688040	6688123	.	+	.	ID=id8014;Dbxref=GeneID:1101530;Note=PS01131 Ribosomal RNA adenine dimethylases signature;gbkey=misc_feature;gene=SCBAC1A6.13
NC_003888.3	RefSeq	ribosome_entry_site	6688692	6688696	.	+	.	ID=id8015;Dbxref=GeneID:1101530;gbkey=RBS;gene=SCBAC1A6.13
NC_003888.3	RefSeq	gene	6688705	6689961	.	+	.	ID=gene6152;Dbxref=GeneID:1101531;Name=SCBAC1A6.14;gbkey=Gene;gene=SCBAC1A6.14;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.14;locus_tag=SCO6090
NC_003888.3	RefSeq	CDS	6688705	6689961	.	+	0	ID=cds6032;Parent=gene6152;Dbxref=Genbank:NP_630198.1,GeneID:1101531;Name=NP_630198.1;Note=SCBAC1A6.14%2C antibiotic resistance macrolide glycosyltransferase%2C len: 418 aa%3B identical to SW:MGT_STRLI (EMBL:M74717) Streptomyces lividans macrolide glycosyltransferase (EC 2.4.1.*) Mgt%2C 418 aa. Contains Pfam match to entry PF00201 UDPGT%2C UDP-glucoronosyl and UDP-glucosyl transferases and match to Prosite entry PS00375 UDP-glycosyltransferases signature;gbkey=CDS;gene=SCBAC1A6.14;product=antibiotic resistance macrolide glycosyltransferase;protein_id=NP_630198.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6689428	6689853	.	+	.	ID=id8016;Dbxref=GeneID:1101531;Note=Pfam match to entry PF00201 UDPGT%2C UDP-glucoronosyl and UDP-glucosyl transferases%2C score 25.70%2C E-value 2.1e-06;gbkey=misc_feature;gene=SCBAC1A6.14
NC_003888.3	RefSeq	sequence_feature	6689617	6689742	.	+	.	ID=id8017;Dbxref=GeneID:1101531;Note=PS00375 UDP-glycosyltransferases signature;gbkey=misc_feature;gene=SCBAC1A6.14
NC_003888.3	RefSeq	stem_loop	6689975	6690019	.	+	.	ID=id8018;Note=possible stem loop. Score 56: 20/21 (95%25) matches%2C 0 gap;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6690041	6692311	.	-	.	ID=gene6153;Dbxref=GeneID:1101532;Name=SCBAC1A6.15c;gbkey=Gene;gene=SCBAC1A6.15c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.15c;locus_tag=SCO6091
NC_003888.3	RefSeq	CDS	6690041	6692311	.	-	0	ID=cds6033;Parent=gene6153;Dbxref=Genbank:NP_630199.1,GeneID:1101532;Name=NP_630199.1;Note=SCBAC1A6.15c%2C probable integral membrane protein%2C len: 756 aa%3B similar to SW:MMLB_MYCTU (EMBL:AL021928) Mycobacterium tuberculosis membrane protein MmpL11 or MTV033.10c%2C 966 aa%3B fasta scores: opt: 1132 z-score: 1196.3 E(): 0%3B 32.6%25 identity in 723 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC1A6.15c;product=hypothetical protein;protein_id=NP_630199.1;transl_table=11
NC_003888.3	RefSeq	gene	6692660	6693208	.	+	.	ID=gene6154;Dbxref=GeneID:1101533;Name=SCBAC1A6.16;gbkey=Gene;gene=SCBAC1A6.16;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.16;locus_tag=SCO6092
NC_003888.3	RefSeq	CDS	6692660	6693208	.	+	0	ID=cds6034;Parent=gene6154;Dbxref=Genbank:NP_630200.1,GeneID:1101533;Name=NP_630200.1;Note=SCBAC1A6.16%2C conserved hypothetical protein%2C len: 182 aa%3B similar to TR:O06552 (EMBL:Z95584) Mycobacterium tuberculosis hypothetical 23.0 kDa protein MTCI65.21c%2C 213 aa%3B fasta scores: opt: 229 z-score: 293.1 E(): 9.5e-09%3B 31.8%25 identity in 179 aa overlap;gbkey=CDS;gene=SCBAC1A6.16;product=hypothetical protein;protein_id=NP_630200.1;transl_table=11
NC_003888.3	RefSeq	gene	6693222	6693968	.	-	.	ID=gene6155;Dbxref=GeneID:1101534;Name=SCBAC1A6.17c;gbkey=Gene;gene=SCBAC1A6.17c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.17c;locus_tag=SCO6093
NC_003888.3	RefSeq	CDS	6693222	6693968	.	-	0	ID=cds6035;Parent=gene6155;Dbxref=Genbank:NP_630201.1,GeneID:1101534;Name=NP_630201.1;Note=SCBAC1A6.17c%2C possible hypothetical protein%2C len: 248 aa%3B similar to TR:Q9L2E8 (EMBL:AL137187) Streptomyces coelicolor  hypothetical protein SC7A8.10c%2C 274 aa%3B fasta scores: opt: 552 z-score: 639.4 E(): 4.9e-28%3B 45.7%25 identity in 234 aa overlap. Contains possible cleavable N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC1A6.17c;product=hypothetical protein;protein_id=NP_630201.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6693975	6693978	.	-	.	ID=id8019;gbkey=RBS
NC_003888.3	RefSeq	gene	6693977	6694888	.	-	.	ID=gene6156;Dbxref=GeneID:1101535;Name=SCBAC1A6.18c;gbkey=Gene;gene=SCBAC1A6.18c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.18c;locus_tag=SCO6094
NC_003888.3	RefSeq	CDS	6693977	6694888	.	-	0	ID=cds6036;Parent=gene6156;Dbxref=Genbank:NP_630202.1,GeneID:1101535;Name=NP_630202.1;Note=SCBAC1A6.18c%2C probable transport system integral membrane protein%2C len: 258 aa%3B similar to SW:SSUC_BACSU (EMBL:Z93102) Bacillus subtilis aliphatic sulfonates transport permease SsuC%2C 276 aa%3B fasta scores: opt: 378 z-score: 422.1 E(): 6.2e-16%3B 28.5%25 identity in 263 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC1A6.18c;product=transport system integral membrane protein;protein_id=NP_630202.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6694121	6694336	.	-	.	ID=id8020;Dbxref=GeneID:1101535;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 36.00%2C E-value 8.8e-07;gbkey=misc_feature;gene=SCBAC1A6.18c
NC_003888.3	RefSeq	sequence_feature	6694247	6694333	.	-	.	ID=id8021;Dbxref=GeneID:1101535;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCBAC1A6.18c
NC_003888.3	RefSeq	gene	6694875	6695669	.	-	.	ID=gene6157;Dbxref=GeneID:1101536;Name=SCBAC1A6.19c;gbkey=Gene;gene=SCBAC1A6.19c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.19c;locus_tag=SCO6095
NC_003888.3	RefSeq	CDS	6694875	6695669	.	-	0	ID=cds6037;Parent=gene6157;Dbxref=Genbank:NP_630203.1,GeneID:1101536;Name=NP_630203.1;Note=SCBAC1A6.19c%2C probable ABC transporter ATP-binding protein%2C len: 264 aa%3B similar to SW:SSUB_BACSU (EMBL:Z93102) Bacillus subtilis aliphatic sulfonates transport ATP-binding protein SsuB%2C 274 aa%3B fasta scores: opt: 628 z-score: 728.2 E(): 0%3B 46.1%25 identity in 217 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCBAC1A6.19c;product=ABC transporter ATP-binding protein;protein_id=NP_630203.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6694899	6694902	.	-	.	ID=id8022;Dbxref=GeneID:1101536;gbkey=RBS;gene=SCBAC1A6.19c
NC_003888.3	RefSeq	sequence_feature	6695010	6695522	.	-	.	ID=id8023;Dbxref=GeneID:1101536;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 200.40%2C E-value 2.7e-56;gbkey=misc_feature;gene=SCBAC1A6.19c
NC_003888.3	RefSeq	sequence_feature	6695196	6695240	.	-	.	ID=id8024;Dbxref=GeneID:1101536;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCBAC1A6.19c
NC_003888.3	RefSeq	sequence_feature	6695478	6695501	.	-	.	ID=id8025;Dbxref=GeneID:1101536;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC1A6.19c
NC_003888.3	RefSeq	ribosome_entry_site	6695675	6695685	.	-	.	ID=id8026;gbkey=RBS
NC_003888.3	RefSeq	gene	6695702	6696805	.	-	.	ID=gene6158;Dbxref=GeneID:1101537;Name=SCBAC1A6.20c;gbkey=Gene;gene=SCBAC1A6.20c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.20c;locus_tag=SCO6096
NC_003888.3	RefSeq	CDS	6695702	6696805	.	-	0	ID=cds6038;Parent=gene6158;Dbxref=Genbank:NP_630204.1,GeneID:1101537;Name=NP_630204.1;Note=SCBAC1A6.20c%2C probable lipoprotein%2C len: 367 aa%3B similar to SW:SSUA_BACSU (EMBL:L16808) Bacillus subtilis aliphatic sulfonates binding protein precursor SsuA%2C 332 aa%3B fasta scores: opt: 280 z-score: 316.7 E(): 4.6e-10%3B 28.2%25 identity in 358 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC1A6.20c;product=lipoprotein;protein_id=NP_630204.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6696731	6696763	.	-	.	ID=id8027;Dbxref=GeneID:1101537;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCBAC1A6.20c
NC_003888.3	RefSeq	ribosome_entry_site	6696816	6696819	.	-	.	ID=id8028;gbkey=RBS
NC_003888.3	RefSeq	gene	6697066	6698421	.	-	.	ID=gene6159;Dbxref=GeneID:1101538;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;gene_synonym=cysN,SCBAC1A6.21c;locus_tag=SCO6097
NC_003888.3	RefSeq	CDS	6697066	6698421	.	-	0	ID=cds6039;Parent=gene6159;Dbxref=Genbank:NP_630205.1,GeneID:1101538;Name=NP_630205.1;Note=SCBAC1A6.21c%2C cysN%2C sulfate adenylyltransferase subunit 1%2C len: 451 aa%3B similar to N-terminal domain of SW:CYSN_PSEAE (EMBL:AF035608) Pseudomonas aeruginosa CysN/CysC bifunctional enzyme%2C 633 aa%3B fasta scores: opt: 1232 z-score: 1300.1 E(): 0%3B 47.5%25 identity in 438 aa overlap and to SW:CYSN_ECOLI (EMBL:M74586) Escherichia coli sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) CysN%2C 475 aa%3B fasta scores: opt: 1192 z-score: 1259.9 E(): 0%3B 46.6%25 identity in 438 aa overlap. Contains Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00301 GTP-binding elongation factors signature;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=NP_630205.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6697360	6698367	.	-	.	ID=id8029;Dbxref=GeneID:1101538;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu family%2C score 247.30%2C E-value 2.1e-70;gbkey=misc_feature;gene=cysN
NC_003888.3	RefSeq	sequence_feature	6698152	6698199	.	-	.	ID=id8030;Dbxref=GeneID:1101538;Note=PS00301 GTP-binding elongation factors signature;gbkey=misc_feature;gene=cysN
NC_003888.3	RefSeq	sequence_feature	6698317	6698340	.	-	.	ID=id8031;Dbxref=GeneID:1101538;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cysN
NC_003888.3	RefSeq	gene	6698424	6699362	.	-	.	ID=gene6160;Dbxref=GeneID:1101539;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;gene_synonym=cysD,SCBAC1A6.22c;locus_tag=SCO6098
NC_003888.3	RefSeq	CDS	6698424	6699362	.	-	0	ID=cds6040;Parent=gene6160;Dbxref=Genbank:NP_630206.1,GeneID:1101539;Name=NP_630206.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;gene=cysD;product=sulfate adenylyltransferase subunit 2;protein_id=NP_630206.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6698595	6699236	.	-	.	ID=id8032;Dbxref=GeneID:1101539;Note=Pfam match to entry PF01507 PAPS_reduct%2C Phosphoadenosine phosphosulfate reductase family%2C score 187.10%2C E-value 2.8e-52;gbkey=misc_feature;gene=cysD
NC_003888.3	RefSeq	gene	6699359	6699895	.	-	.	ID=gene6161;Dbxref=GeneID:1101540;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;gene_synonym=cysC,SCBAC1A6.23c;locus_tag=SCO6099
NC_003888.3	RefSeq	CDS	6699359	6699895	.	-	0	ID=cds6041;Parent=gene6161;Dbxref=Genbank:NP_630207.1,GeneID:1101540;Name=NP_630207.1;Note=SCBAC1A6.23c%2C cysC%2C adenylylsulfate kinase%2C len: 178 aa%3B highly similar to C-terminal region of SW:MET3_EMENI (EMBL:X82541) Emericella nidulans sulfate adenylyltransferase (EC 2.7.7.4) Sc%2C 574 aa%3B fasta scores: opt: 481 z-score: 561.7 E(): 1.1e-23%3B 46.0%25 identity in 174 aa overlap and to N-terminal region of SW:PPS1_HUMAN (EMBL:Y10387) Homo sapiens bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthethase 1 [includes: sulfate adenylyltransferase (EC 2.7.7.4)%3B adenylylsulfate kinase (EC 2.7.1.25)] PapSS1 where the kinase activity is situated%2C 624 aa%3B fasta scores: opt: 476 z-score: 555.3 E(): 2.5e-23%3B 44.3%25 identity in 174 aa overlap. Contains Pfam match to entry PF01583 APS_kinase%2C Adenylylsulfate kinase and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=cysC;product=adenylyl-sulfate kinase;protein_id=NP_630207.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6699413	6699889	.	-	.	ID=id8033;Dbxref=GeneID:1101540;Note=Pfam match to entry PF01583 APS_kinase%2C Adenylylsulfate kinase%2C score 278.60%2C E-value 7.8e-80;gbkey=misc_feature;gene=cysC
NC_003888.3	RefSeq	sequence_feature	6699842	6699865	.	-	.	ID=id8034;Dbxref=GeneID:1101540;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cysC
NC_003888.3	RefSeq	ribosome_entry_site	6699902	6699905	.	-	.	ID=id8035;gbkey=RBS
NC_003888.3	RefSeq	repeat_region	6699917	6699995	.	-	.	ID=id8036;Note=5x degenerate repeat: (A/G)CCAGG(C/G)CACCA(C/G);gbkey=repeat_region
NC_003888.3	RefSeq	gene	6700005	6700715	.	-	.	ID=gene6162;Dbxref=GeneID:1101541;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;gene_synonym=cysH,SCBAC1A6.24c;locus_tag=SCO6100
NC_003888.3	RefSeq	CDS	6700005	6700715	.	-	0	ID=cds6042;Parent=gene6162;Dbxref=Genbank:NP_630208.1,GeneID:1101541;Name=NP_630208.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;gene=cysH;product=phosphoadenosine phosphosulfate reductase;protein_id=NP_630208.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6700011	6700586	.	-	.	ID=id8037;Dbxref=GeneID:1101541;Note=Pfam match to entry PF01507 PAPS_reduct%2C Phosphoadenosine phosphosulfate reductase family%2C score 221.00%2C E-value 1.7e-62;gbkey=misc_feature;gene=cysH
NC_003888.3	RefSeq	gene	6700712	6700891	.	-	.	ID=gene6163;Dbxref=GeneID:1101542;Name=SCBAC1A6.25c;gbkey=Gene;gene=SCBAC1A6.25c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.25c;locus_tag=SCO6101
NC_003888.3	RefSeq	CDS	6700712	6700891	.	-	0	ID=cds6043;Parent=gene6163;Dbxref=Genbank:NP_630209.1,GeneID:1101542;Name=NP_630209.1;Note=SCBAC1A6.25c%2C unknown%2C len: 59 aa;gbkey=CDS;gene=SCBAC1A6.25c;product=hypothetical protein;protein_id=NP_630209.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6700725	6700729	.	-	.	ID=id8038;Dbxref=GeneID:1101542;gbkey=RBS;gene=SCBAC1A6.25c
NC_003888.3	RefSeq	gene	6700888	6702585	.	-	.	ID=gene6164;Dbxref=GeneID:1101543;Name=SCBAC1A6.26c;gbkey=Gene;gene=SCBAC1A6.26c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.26c;locus_tag=SCO6102
NC_003888.3	RefSeq	CDS	6700888	6702585	.	-	0	ID=cds6044;Parent=gene6164;Dbxref=Genbank:NP_630210.1,GeneID:1101543;Name=NP_630210.1;Note=SCBAC1A6.26c%2C probable nitrite/sulphite reductase%2C len: 565 aa%3B similar to SW:NIR_SYNP7 (EMBL:D12723) Synechococcus sp. ferredoxin--nitrite reductase (EC 1.7.7.1) NirA%2C 512 aa%3B fasta scores: opt: 935 z-score: 1113.1 E(): 0%3B 35.6%25 identity in 525 aa overlap. Contains Pfam match to entry PF01077 NIR_SIR%2C Nitrite and sulphite reductase 4Fe-4S domain;gbkey=CDS;gene=SCBAC1A6.26c;product=nitrite/sulfite reductase;protein_id=NP_630210.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6700899	6700904	.	-	.	ID=id8039;Dbxref=GeneID:1101543;gbkey=RBS;gene=SCBAC1A6.26c
NC_003888.3	RefSeq	sequence_feature	6701110	6701310	.	-	.	ID=id8040;Dbxref=GeneID:1101543;Note=Pfam match to entry PF01077 NIR_SIR%2C Nitrite and sulphite reductase 4Fe-4S domain%2C score 82.80%2C E-value 6.8e-21;gbkey=misc_feature;gene=SCBAC1A6.26c
NC_003888.3	RefSeq	gene	6702969	6703541	.	-	.	ID=gene6165;Dbxref=GeneID:1101544;Name=SCBAC1A6.27c;gbkey=Gene;gene=SCBAC1A6.27c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.27c;locus_tag=SCO6103
NC_003888.3	RefSeq	CDS	6702969	6703541	.	-	0	ID=cds6045;Parent=gene6165;Dbxref=Genbank:NP_630211.1,GeneID:1101544;Name=NP_630211.1;Note=SCBAC1A6.27c%2C possible acetyltransferase%2C len: 190 aa. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SCBAC1A6.27c;product=acetyltransferase;protein_id=NP_630211.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6703044	6703310	.	-	.	ID=id8041;Dbxref=GeneID:1101544;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 49.40%2C E-value 7.8e-11;gbkey=misc_feature;gene=SCBAC1A6.27c
NC_003888.3	RefSeq	gene	6703618	6704931	.	-	.	ID=gene6166;Dbxref=GeneID:1101545;Name=SCBAC1A6.28c;gbkey=Gene;gene=SCBAC1A6.28c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.28c;locus_tag=SCO6104
NC_003888.3	RefSeq	CDS	6703618	6704931	.	-	0	ID=cds6046;Parent=gene6166;Dbxref=Genbank:NP_630212.1,GeneID:1101545;Name=NP_630212.1;Note=SCBAC1A6.28c%2C possible hypothetical protein%2C len: 437 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC1A6.28c;product=hypothetical protein;protein_id=NP_630212.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6704935	6704940	.	-	.	ID=id8042;gbkey=RBS
NC_003888.3	RefSeq	gene	6705148	6706437	.	-	.	ID=gene6167;Dbxref=GeneID:1101546;Name=SCBAC1A6.29c;gbkey=Gene;gene=SCBAC1A6.29c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.29c;locus_tag=SCO6105
NC_003888.3	RefSeq	CDS	6705148	6706437	.	-	0	ID=cds6047;Parent=gene6167;Dbxref=Genbank:NP_630213.1,GeneID:1101546;Name=NP_630213.1;Note=SCBAC1A6.29c%2C possible regulatory protein%2C len: 429 aa%3B N-terminal region similar to N-terminal region of TR:Q9RJZ7 (EMBL:AL133210) Streptomyces coelicolor transcriptional regulator SCF37.04%2C 419 aa%3B fasta scores: opt: 520 z-score: 594.4 E(): 1.6e-25%3B 40.8%25 identity in 240 aa overlap;gbkey=CDS;gene=SCBAC1A6.29c;product=regulatory protein;protein_id=NP_630213.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6705471	6705629	.	-	.	ID=id8043;Dbxref=GeneID:1101546;Note=high G+C content region (81.76%25);gbkey=misc_feature;gene=SCBAC1A6.29c
NC_003888.3	RefSeq	ribosome_entry_site	6706441	6706445	.	-	.	ID=id8044;gbkey=RBS
NC_003888.3	RefSeq	gene	6706680	6708353	.	-	.	ID=gene6168;Dbxref=GeneID:1101547;Name=SCBAC1A6.30c;gbkey=Gene;gene=SCBAC1A6.30c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.30c;locus_tag=SCO6106
NC_003888.3	RefSeq	CDS	6706680	6708353	.	-	0	ID=cds6048;Parent=gene6168;Dbxref=Genbank:NP_630214.1,GeneID:1101547;Name=NP_630214.1;Note=SCBAC1A6.30c%2C possible acyl-CoA dehydrogenase%2C len: 557 aa%3B similar to SW:AIDB_ECOLI (EMBL:L20915) Escherichia coli AidB protein%2C 541 aa%3B fasta scores: opt: 916 z-score: 1055.7 E(): 0%3B 45.5%25 identity in 539 aa overlap and to TR:CAC13064 (EMBL:AL445503) Streptomyces coelicolor  oxidoreductase 2SCG38.05%2C 567 aa%3B fasta scores: opt: 1480 z-score: 1414.3 E(): 0%3B 61.8%25 identity in 555 aa overlap. Contains Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and match to Prosite entry PS00072 Acyl-CoA dehydrogenases signature 1 and PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=CDS;gene=SCBAC1A6.30c;product=acyl-CoA dehydrogenase;protein_id=NP_630214.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6707007	6707993	.	-	.	ID=id8045;Dbxref=GeneID:1101547;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 173.30%2C E-value 5e-50;gbkey=misc_feature;gene=SCBAC1A6.30c
NC_003888.3	RefSeq	sequence_feature	6707067	6707126	.	-	.	ID=id8046;Dbxref=GeneID:1101547;Note=PS00073 Acyl-CoA dehydrogenases signature 2;gbkey=misc_feature;gene=SCBAC1A6.30c
NC_003888.3	RefSeq	sequence_feature	6707772	6707810	.	-	.	ID=id8047;Dbxref=GeneID:1101547;Note=PS00072 Acyl-CoA dehydrogenases signature 1;gbkey=misc_feature;gene=SCBAC1A6.30c
NC_003888.3	RefSeq	gene	6708580	6709614	.	+	.	ID=gene6169;Dbxref=GeneID:1101548;Name=SCBAC1A6.31;gbkey=Gene;gene=SCBAC1A6.31;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.31;locus_tag=SCO6107
NC_003888.3	RefSeq	CDS	6708580	6709614	.	+	0	ID=cds6049;Parent=gene6169;Dbxref=Genbank:NP_630215.1,GeneID:1101548;Name=NP_630215.1;Note=SCBAC1A6.31%2C possible integral membrane protein%2C len: 344 aa%3B similar to TR:O07208 (EMBL:Z96072) Mycobacterium tuberculosis hypothetical 35.0 kDa protein MTCY05A6.28%2C 324 aa%3B fasta scores: opt: 593 z-score: 664.2 E(): 2e-29%3B 36.2%25 identity in 268 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC1A6.31;product=hypothetical protein;protein_id=NP_630215.1;transl_table=11
NC_003888.3	RefSeq	gene	6709909	6711471	.	+	.	ID=gene6170;Dbxref=GeneID:1101549;Name=fusH;gbkey=Gene;gene=fusH;gene_biotype=protein_coding;gene_synonym=fusH,SCBAC1A6.32;locus_tag=SCO6108
NC_003888.3	RefSeq	CDS	6709909	6711471	.	+	0	ID=cds6050;Parent=gene6170;Dbxref=Genbank:NP_630216.1,GeneID:1101549;Name=NP_630216.1;Note=SCBAC1A6.32%2C fusH%2C esterase%2C len: 520 aa%3B identical to TR:Q54344 (EMBL:Z50108) Streptomyces lividans  esterase FusH%2C 520 aa. Contains Pfam match to entry PF00089 trypsin%2C Trypsin and a 3x degenerate repeat at C-terminal region: DLGRLYFADVDGDRKADMIVHT(S/G)DGN(I/V)EVRFNHGTYWDQGTHWSGGWGRF. Also contains possible hydrophobic membrane spanning region at N-terminal domain;gbkey=CDS;gene=fusH;product=esterase;protein_id=NP_630216.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6710047	6710670	.	+	.	ID=id8048;Dbxref=GeneID:1101549;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 111.90%2C E-value 1.1e-34;gbkey=misc_feature;gene=fusH
NC_003888.3	RefSeq	repeat_region	6710845	6711318	.	+	.	ID=id8049;Dbxref=GeneID:1101549;Note=3x repeat unit translated in SCBAC1A6.32;gbkey=repeat_region;gene=fusH
NC_003888.3	RefSeq	ribosome_entry_site	6711497	6711500	.	+	.	ID=id8050;gbkey=RBS
NC_003888.3	RefSeq	gene	6711507	6713030	.	+	.	ID=gene6171;Dbxref=GeneID:1101550;Name=SCBAC1A6.33;gbkey=Gene;gene=SCBAC1A6.33;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.33;locus_tag=SCO6109
NC_003888.3	RefSeq	CDS	6711507	6713030	.	+	0	ID=cds6051;Parent=gene6171;Dbxref=Genbank:NP_630217.1,GeneID:1101550;Name=NP_630217.1;Note=SCBAC1A6.33%2C probable  hydrolase%2C len: 507 aa%3B similar to TR:Q54345 (EMBL:Z50108) Streptomyces lividans esterase precursor FusH%2C 509 aa%3B fasta scores: opt: 629 z-score: 651.1 E(): 1.1e-28%3B 33.2%25 identity in 515 aa overlap and to TR:CAC32668 (EMBL:AL589148) Streptomyces coelicolor  esterase SCP1.199c%2C 505 aa%3B fasta scores: opt: 2894 z-score: 2571.4 E(): 0%3B 83.0%25 identity in 506 aa overlap. Contains Pfam match to entry PF00089 trypsin%2C Trypsin and possible N-terminal region signal peptide sequence. Also contains 2x degenerate repeat: NADGRxDxxAVxDDGSL(8x)GxL(3x)RxLWxDNTWxPM(3x)GGDFxxDGxGDxA AV(3x)GTLxLYTGTxTGxLNK;gbkey=CDS;gene=SCBAC1A6.33;product=hydrolase;protein_id=NP_630217.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6711597	6712238	.	+	.	ID=id8051;Dbxref=GeneID:1101550;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 67.70%2C E-value 1.2e-20;gbkey=misc_feature;gene=SCBAC1A6.33
NC_003888.3	RefSeq	repeat_region	6712305	6713003	.	+	.	ID=id8052;Dbxref=GeneID:1101550;Note=2x degenerate repeat unit translated in SCBAC1A6.33;gbkey=repeat_region;gene=SCBAC1A6.33
NC_003888.3	RefSeq	gene	6713089	6714015	.	-	.	ID=gene6172;Dbxref=GeneID:1101551;Name=SCBAC1A6.34c;gbkey=Gene;gene=SCBAC1A6.34c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.34c;locus_tag=SCO6110
NC_003888.3	RefSeq	CDS	6713089	6714015	.	-	0	ID=cds6052;Parent=gene6172;Dbxref=Genbank:NP_630218.1,GeneID:1101551;Name=NP_630218.1;Note=SCBAC1A6.34c%2C probable sugar kinase%2C len: 308 aa%3B similar to SW:GLK_STRCO (EMBL:X65932) Streptomyces coelicolor glucokinase (EC 2.7.1.2) Glk or SC6E10.20c%2C 317 aa%3B fasta scores: opt: 391 z-score: 407.0 E(): 4.3e-15%3B 34.4%25 identity in 314 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family and match to Prosite entry PS01125 ROK family signature;gbkey=CDS;gene=SCBAC1A6.34c;product=sugar kinase;protein_id=NP_630218.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6713434	6713985	.	-	.	ID=id8053;Dbxref=GeneID:1101551;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 134.30%2C E-value 7.6e-39;gbkey=misc_feature;gene=SCBAC1A6.34c
NC_003888.3	RefSeq	sequence_feature	6713512	6713595	.	-	.	ID=id8054;Dbxref=GeneID:1101551;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SCBAC1A6.34c
NC_003888.3	RefSeq	gene	6714012	6715769	.	-	.	ID=gene6173;Dbxref=GeneID:1101552;Name=SCBAC1A6.35c;gbkey=Gene;gene=SCBAC1A6.35c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.35c;locus_tag=SCO6111
NC_003888.3	RefSeq	CDS	6714012	6715769	.	-	0	ID=cds6053;Parent=gene6173;Dbxref=Genbank:NP_630219.1,GeneID:1101552;Name=NP_630219.1;Note=SCBAC1A6.35c%2C probable oligopeptide ABC transporter ATP-binding protein%2C len: 585 aa%3B similar to SW:YLIA_ECOLI (EMBL:AE000185) Escherichia coli hypothetical ABC transporter ATP-binding protein YliA%2C 629 aa%3B fasta scores: opt: 1480 z-score: 1352.7 E(): 0%3B 44.5%25 identity in 580 aa overlap and N- and C-terminal regions both similar to SW:OPPD_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport ATP-binding protein OppD%2C 358 aa%3B fasta scores: opt: 864 z-score: 796.4 E(): 0%3B 49.6%25 identity in 274 aa overlap. Contains 2x Pfam matches to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries 2x PS00017 ATP/GTP-binding site motif A (P-loop) and 2x PS00211 ABC transporters family signature;gbkey=CDS;gene=SCBAC1A6.35c;product=oligopeptide ABC transporter ATP-binding protein;protein_id=NP_630219.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6714021	6714025	.	-	.	ID=id8055;Dbxref=GeneID:1101552;gbkey=RBS;gene=SCBAC1A6.35c
NC_003888.3	RefSeq	sequence_feature	6714180	6714755	.	-	.	ID=id8056;Dbxref=GeneID:1101552;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 202.00%2C E-value 8.9e-57;gbkey=misc_feature;gene=SCBAC1A6.35c
NC_003888.3	RefSeq	sequence_feature	6714366	6714410	.	-	.	ID=id8057;Dbxref=GeneID:1101552;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCBAC1A6.35c
NC_003888.3	RefSeq	sequence_feature	6714711	6714734	.	-	.	ID=id8058;Dbxref=GeneID:1101552;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC1A6.35c
NC_003888.3	RefSeq	sequence_feature	6715044	6715634	.	-	.	ID=id8059;Dbxref=GeneID:1101552;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 210.80%2C E-value 2.1e-59;gbkey=misc_feature;gene=SCBAC1A6.35c
NC_003888.3	RefSeq	sequence_feature	6715230	6715274	.	-	.	ID=id8060;Dbxref=GeneID:1101552;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCBAC1A6.35c
NC_003888.3	RefSeq	sequence_feature	6715590	6715613	.	-	.	ID=id8061;Dbxref=GeneID:1101552;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC1A6.35c
NC_003888.3	RefSeq	gene	6715766	6716659	.	-	.	ID=gene6174;Dbxref=GeneID:1101553;Name=SCBAC1A6.36c;gbkey=Gene;gene=SCBAC1A6.36c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.36c;locus_tag=SCO6112
NC_003888.3	RefSeq	CDS	6715766	6716659	.	-	0	ID=cds6054;Parent=gene6174;Dbxref=Genbank:NP_630220.1,GeneID:1101553;Name=NP_630220.1;Note=SCBAC1A6.36c%2C probable oligopeptide ABC transporter integral membrane protein%2C len: 297 aa%3B similar to SW:APPC_BACSU (EMBL:U20909) Bacillus subtilis oligopeptide transport system permease AppC%2C 303 aa%3B fasta scores: opt: 725 z-score: 842.9 E(): 0%3B 39.4%25 identity in 287 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC1A6.36c;product=oligopeptide ABC transporter integral membrane protein;protein_id=NP_630220.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6715778	6715781	.	-	.	ID=id8062;Dbxref=GeneID:1101553;gbkey=RBS;gene=SCBAC1A6.36c
NC_003888.3	RefSeq	sequence_feature	6715892	6716122	.	-	.	ID=id8063;Dbxref=GeneID:1101553;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 24.10%2C E-value 0.0032;gbkey=misc_feature;gene=SCBAC1A6.36c
NC_003888.3	RefSeq	gene	6716656	6717615	.	-	.	ID=gene6175;Dbxref=GeneID:1101554;Name=SCBAC1A6.37c;gbkey=Gene;gene=SCBAC1A6.37c;gene_biotype=protein_coding;gene_synonym=SCBAC1A6.37c,SCBAC33E8.01c;locus_tag=SCO6113
NC_003888.3	RefSeq	CDS	6716656	6717615	.	-	0	ID=cds6055;Parent=gene6175;Dbxref=Genbank:NP_733687.1,GeneID:1101554;Name=NP_733687.1;Note=SCBAC33E8.01c%2C possible peptide ABC transporter integral membrane protein (fragment)%2C len: >47 aa. Similar to the N-terminal part of TR:Q9KGM9 (EMBL:AP001507) Bacillus halodurans oligopeptide ABC transporter (permease) BH0029%2C 314 aa%3B fasta scores: opt: 136 Z-score: 200.4 bits: 42.5 E(): 0.0014%3B 47.826%25 identity in 46 aa overlap~SCBAC1A6.37c%2C probable oligopeptide ABC transporter integral membrane protein (fragment)%2C len: >312 aa%3B similar to SW:APPB_BACSU (EMBL:U20909) Bacillus subtilis oligopeptide transport system permease AppB%2C 317 aa%3B fasta scores: opt: 763 z-score: 895.6 E(): 0%3B 37.0%25 identity in 311 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC1A6.37c;product=peptide ABC transporter integral membrane protein;protein_id=NP_733687.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6716782	6716997	.	-	.	ID=id8064;Dbxref=GeneID:1101554;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 34.60%2C E-value 2.3e-06;gbkey=misc_feature;gene=SCBAC1A6.37c
NC_003888.3	RefSeq	sequence_feature	6716908	6716994	.	-	.	ID=id8065;Dbxref=GeneID:1101554;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCBAC1A6.37c
NC_003888.3	RefSeq	gene	6717677	6719485	.	-	.	ID=gene6176;Dbxref=GeneID:1101555;Name=SC9B2.01c;gbkey=Gene;gene=SC9B2.01c;gene_biotype=protein_coding;gene_synonym=SC9B2.01c,SCBAC33E8.02c;locus_tag=SCO6114
NC_003888.3	RefSeq	CDS	6717677	6719485	.	-	0	ID=cds6056;Parent=gene6176;Dbxref=Genbank:NP_733688.1,GeneID:1101555;Name=NP_733688.1;Note=SC9B2.01c%2C partial CDS%2C possible  peptide binding /transport protein%2C len: 223aa%3B similar to many eg. SW:OPPA_BACSU oligopeptide-binding protein OppA from Bacillus subtilis (545 aa) fasta scores%3B opt: 117%2C z-score: 142.4%2C E(): 1.2%2C (25.9%25 identity in 139 aa overlap). Contains probable N-terminal signal sequence.~SCBAC33E8.02c%2C possible peptide-binding transport protein (fragment)%2C len: >411 aa. Similar to C-terminal region of TR:Q9K6T2 (EMBL:AP001519) Bacillus halodurans dipeptide ABC transporter (dipeptide-binding protein) BH3644%2C 557 aa%3B fasta scores: opt: 199 Z-score: 227.0 bits: 51.4 E(): 4.8e-05%3B 23.179%25 identity in 302 aa overlap. Contains 2x Pfam matches to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5;gbkey=CDS;gene=SC9B2.01c;product=peptide-binding transport protein;protein_id=NP_733688.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6717839	6717913	.	-	.	ID=id8066;Dbxref=GeneID:1101555;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 5.90%2C E-value 0.72;gbkey=misc_feature;gene=SC9B2.01c
NC_003888.3	RefSeq	sequence_feature	6718247	6718762	.	-	.	ID=id8067;Dbxref=GeneID:1101555;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 19.30%2C E-value 0.00014;gbkey=misc_feature;gene=SC9B2.01c
NC_003888.3	RefSeq	gene	6719695	6720918	.	+	.	ID=gene6177;Dbxref=GeneID:1101556;Name=SC9B2.02;gbkey=Gene;gene=SC9B2.02;gene_biotype=protein_coding;gene_synonym=SC9B2.02;locus_tag=SCO6115
NC_003888.3	RefSeq	CDS	6719695	6720918	.	+	0	ID=cds6057;Parent=gene6177;Dbxref=Genbank:NP_630221.1,GeneID:1101556;Name=NP_630221.1;Note=SC9B2.02%2C possible ROK family transcriptional regulator%2C len: 407 aa%3B similar to many e.g. SW:XYLR_BACSU xylose repressor XylR from Bacillus subtilis (384 aa) fasta scores%3B opt: 470%2C z-score: 522.8%2C E(): 7.9e-22%2C (28.4%25 identity in 370 aa overlap). Contains Pfam match to entry PF00480 ROK%2C ROK family. Also contains a probable helix-turn-helix (+3.71 SD) at residues 32 to 53.;gbkey=CDS;gene=SC9B2.02;product=transcriptional regulator;protein_id=NP_630221.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6719956	6720510	.	+	.	ID=id8068;Dbxref=GeneID:1101556;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 115.30%2C E-value 3.3e-33;gbkey=misc_feature;gene=SC9B2.02
NC_003888.3	RefSeq	gene	6720968	6722509	.	+	.	ID=gene6178;Dbxref=GeneID:1101557;Name=SC9B2.03;gbkey=Gene;gene=SC9B2.03;gene_biotype=protein_coding;gene_synonym=SC9B2.03;locus_tag=SCO6116
NC_003888.3	RefSeq	CDS	6720968	6722509	.	+	0	ID=cds6058;Parent=gene6178;Dbxref=Genbank:NP_630222.1,GeneID:1101557;Name=NP_630222.1;Note=SC9B2.03%2C conserved hypothetical protein%2C len: 513 aa%3B similar to TR:CAC49227 (EMBL:AL603645) Rhizobium meliloti conserved hypothetical protein SMB21161%2C 477 aa%3B fasta scores: opt: 1078 Z-score: 1182.9 E(): 2.9e-58%3B 40.678%25 identity in 472 aa overlap;gbkey=CDS;gene=SC9B2.03;product=hypothetical protein;protein_id=NP_630222.1;transl_table=11
NC_003888.3	RefSeq	gene	6722506	6723300	.	+	.	ID=gene6179;Dbxref=GeneID:1101558;Name=SC9B2.04;gbkey=Gene;gene=SC9B2.04;gene_biotype=protein_coding;gene_synonym=SC9B2.04;locus_tag=SCO6117
NC_003888.3	RefSeq	CDS	6722506	6723300	.	+	0	ID=cds6059;Parent=gene6179;Dbxref=Genbank:NP_630223.1,GeneID:1101558;Name=NP_630223.1;Note=SC9B2.04%2C unknown%2C len: 264aa%3B similar to CUTC_ECOLI copper homeostasis protein of undefined function%2C CutC%2C from Escherichia coli (248 aa) fasta scores%3B opt: 446%2C z-score: 453.8%2C E(): 5.5e-18%2C (37.6%25 identity in 242 aa overlap) and YOJ7_CAEEL hypothetical protein from Caenorhabditis elegans (250 aa) fasta scores%3B opt: 394%2C z-score: 402.4%2C E(): 4e-15%2C (39.3%25 identity in 191 aa overlap). Contains possible N-terminal region signal sequence peptide.;gbkey=CDS;gene=SC9B2.04;product=hypothetical protein;protein_id=NP_630223.1;transl_table=11
NC_003888.3	RefSeq	gene	6723322	6724296	.	+	.	ID=gene6180;Dbxref=GeneID:1101559;Name=SC9B2.05;gbkey=Gene;gene=SC9B2.05;gene_biotype=protein_coding;gene_synonym=SC9B2.05;locus_tag=SCO6118
NC_003888.3	RefSeq	CDS	6723322	6724296	.	+	0	ID=cds6060;Parent=gene6180;Dbxref=Genbank:NP_630224.1,GeneID:1101559;Name=NP_630224.1;Note=SC9B2.05%2C possible AraC family transcriptional regulator%2C len: 324aa%3B similar to many eg. TR:O31249 (EMBL:AJ002316) AlkR%2C transcriptional regulator of alkane utilization in Acinetobacter sp. strain ADP1 (306 aa) fasta scores%3B opt: 390%2C z-score: 436.9%2C E(): 4.8e-17%2C (28.3%25 identity in 314 aa overlap). Contains PS00041 Bacterial regulatory proteins%2C araC family signature and Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family. Also contains a probable helix-turn-helix (+3.45 SD) at residues 238 to 259.;gbkey=CDS;gene=SC9B2.05;product=AraC family transcription regulator;protein_id=NP_630224.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6724027	6724287	.	+	.	ID=id8069;Dbxref=GeneID:1101559;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 84.70%2C E-value 1.9e-21;gbkey=misc_feature;gene=SC9B2.05
NC_003888.3	RefSeq	sequence_feature	6724138	6724266	.	+	.	ID=id8070;Dbxref=GeneID:1101559;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=SC9B2.05
NC_003888.3	RefSeq	gene	6724307	6724990	.	+	.	ID=gene6181;Dbxref=GeneID:1101560;Name=SC9B2.06;gbkey=Gene;gene=SC9B2.06;gene_biotype=protein_coding;gene_synonym=SC9B2.06;locus_tag=SCO6119
NC_003888.3	RefSeq	CDS	6724307	6724990	.	+	0	ID=cds6061;Parent=gene6181;Dbxref=Genbank:NP_630225.1,GeneID:1101560;Name=NP_630225.1;Note=SC9B2.06%2C possible AraC family transcriptional regulator%2C len: 227aa%3B similar to many eg. SW:YMCR_STRLA proposed transcriptional regulator from Streptomyces lavendulae (281 aa) fasta scores%3B opt: 860%2C z-score: 947.3%2C E(): 0%2C (60.2%25 identity in 231 aa overlap) and C-terminal similarity to SW:RHAS_ECOLI RhaS%2C L-rhamnose operon regulatory protein from Escherichia coli (278 aa) fasta scores%3B opt: 119%2C z-score: 140.2%2C E(): 1.6%2C (28.4%25 identity in 81 aa overlap). Contains PS00041 Bacterial regulatory proteins%2C araC family signature and Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family.;gbkey=CDS;gene=SC9B2.06;product=AraC family transcription regulator;protein_id=NP_630225.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6724733	6724987	.	+	.	ID=id8071;Dbxref=GeneID:1101560;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 12.00%2C E-value 0.001;gbkey=misc_feature;gene=SC9B2.06
NC_003888.3	RefSeq	sequence_feature	6724835	6724969	.	+	.	ID=id8072;Dbxref=GeneID:1101560;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=SC9B2.06
NC_003888.3	RefSeq	gene	6725136	6725624	.	+	.	ID=gene6182;Dbxref=GeneID:1101561;Name=SC9B2.07;gbkey=Gene;gene=SC9B2.07;gene_biotype=protein_coding;gene_synonym=SC9B2.07;locus_tag=SCO6120
NC_003888.3	RefSeq	CDS	6725136	6725624	.	+	0	ID=cds6062;Parent=gene6182;Dbxref=Genbank:NP_630226.1,GeneID:1101561;Name=NP_630226.1;Note=SC9B2.07%2C unknown%2C len: 162 aa%3B similar to TR:E1319700 (EMBL:AL031541) unknown ORF in IS117 from Streptomyces coelicolor (175 aa) fasta scores%3B opt: 267%2C z-score: 323.9%2C E(): 9.4e-11%2C (32.7%25 identity in 162 aa overlap). Also similar to SW:YM2_STRCO hypothetical protein in the mini-circle%2C a transposable element of Streptomyces coelicolor A3(2) (122 aa) fasta scores%3B opt: 217%2C z-score: 268.1%2C E(): 1.2e-07%2C (34.2%25 identity in 120 aa overlap).;gbkey=CDS;gene=SC9B2.07;product=hypothetical protein;protein_id=NP_630226.1;transl_table=11
NC_003888.3	RefSeq	gene	6725692	6726270	.	-	.	ID=gene6183;Dbxref=GeneID:1101562;Name=SC9B2.08c;gbkey=Gene;gene=SC9B2.08c;gene_biotype=protein_coding;gene_synonym=SC9B2.08c;locus_tag=SCO6121
NC_003888.3	RefSeq	CDS	6725692	6726270	.	-	0	ID=cds6063;Parent=gene6183;Dbxref=Genbank:NP_630227.1,GeneID:1101562;Name=NP_630227.1;Note=SC9B2.08c%2C possible transcriptional regulator%2C len: 192 aa%3B similar to many e.g. TR:O34892 (EMBL:AF027868) proposed transcriptional regulator from Bacillus subtilis (191 aa) fasta scores%3B opt: 168%2C z-score: 207.7%2C E(): 0.00028%2C (30.2%25 identity in 96 aa overlap) and SW:TER3_ECOLI tetracycline repressor protein class C from Escherichia coli (219 aa) fasta scores%3B opt: 149%2C z-score: 184.7%2C E(): 0.0053%2C (45.5%25 identity in 55 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Also contains a probable helix-turn-helix (+4.23 SD) at residues 35..56;gbkey=CDS;gene=SC9B2.08c;product=transcriptional regulator;protein_id=NP_630227.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6726079	6726219	.	-	.	ID=id8073;Dbxref=GeneID:1101562;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 28.50%2C E-value 3.8e-06;gbkey=misc_feature;gene=SC9B2.08c
NC_003888.3	RefSeq	gene	6726363	6726809	.	+	.	ID=gene6184;Dbxref=GeneID:1101563;Name=SC9B2.09;gbkey=Gene;gene=SC9B2.09;gene_biotype=protein_coding;gene_synonym=SC9B2.09;locus_tag=SCO6122
NC_003888.3	RefSeq	CDS	6726363	6726809	.	+	0	ID=cds6064;Parent=gene6184;Dbxref=Genbank:NP_630228.1,GeneID:1101563;Name=NP_630228.1;Note=SC9B2.09%2C possible membrane protein%2C len: 192aa%3B similar to TR:O32455 (EMBL:D87924) the 5th gene in the polyketide synthase genes for pradimicin biosynthesis from Actinomadura hibisca (153 aa) fasta scores%3B opt: 129%2C z-score: 175.5%2C E(): 0.017%2C (31.1%25 identity in 122 aa overlap) and to TR:Q9RDS5 (EMBL:AL136500) Streptomyces coelicolor  membrane protein SC1G2.04c%2C 148 aa%3B fasta scores: opt: 727 Z-score: 852.7 E(): 7.3e-40%3B 75.510%25 identity in 147 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9B2.09;product=hypothetical protein;protein_id=NP_630228.1;transl_table=11
NC_003888.3	RefSeq	gene	6726883	6727275	.	-	.	ID=gene6185;Dbxref=GeneID:1101564;Name=SC9B2.10c;gbkey=Gene;gene=SC9B2.10c;gene_biotype=protein_coding;gene_synonym=SC9B2.10c;locus_tag=SCO6123
NC_003888.3	RefSeq	CDS	6726883	6727275	.	-	0	ID=cds6065;Parent=gene6185;Dbxref=Genbank:NP_630229.1,GeneID:1101564;Name=NP_630229.1;Note=SC9B2.10c%2C possible quinone binding protein%2C len: 130aa%3B similar to TR:O05205 (EMBL:U92563) mitomycin-binding protein from Streptomyces lavendulae (130 aa) fasta scores%3B opt: 453%2C z-score: 551.3%2C E(): 2.1e-23%2C (49.6%25 identity in 129 aa overlap).;gbkey=CDS;gene=SC9B2.10c;product=quinone binding protein;protein_id=NP_630229.1;transl_table=11
NC_003888.3	RefSeq	gene	6727703	6728032	.	+	.	ID=gene6186;Dbxref=GeneID:1101565;Name=SC9B2.11;gbkey=Gene;gene=SC9B2.11;gene_biotype=protein_coding;gene_synonym=SC9B2.11;locus_tag=SCO6124
NC_003888.3	RefSeq	CDS	6727703	6728032	.	+	0	ID=cds6066;Parent=gene6186;Dbxref=Genbank:NP_630230.1,GeneID:1101565;Name=NP_630230.1;Note=SC9B2.11%2C unknown%2C len: 109 aa%3B has a short region of similarity to C-terminal region of SW:TRPD_MYCTU probable anthranilate phosphoribosyltransferase (370 aa) fasta scores%3B opt: 111%2C z-score: 142.1%2C E(): 1.3%2C (38.5%25 identity in 65 aa overlap).;gbkey=CDS;gene=SC9B2.11;product=hypothetical protein;protein_id=NP_630230.1;transl_table=11
NC_003888.3	RefSeq	gene	6728081	6728752	.	+	.	ID=gene6187;Dbxref=GeneID:1101566;Name=SC9B2.12;gbkey=Gene;gene=SC9B2.12;gene_biotype=protein_coding;gene_synonym=SC9B2.12;locus_tag=SCO6125
NC_003888.3	RefSeq	CDS	6728081	6728752	.	+	0	ID=cds6067;Parent=gene6187;Dbxref=Genbank:NP_630231.1,GeneID:1101566;Name=NP_630231.1;Note=SC9B2.12%2C possible membrane lipoprotein%2C len: 219aa%3B Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC9B2.12;product=membrane lipoprotein;protein_id=NP_630231.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6728111	6728143	.	+	.	ID=id8074;Dbxref=GeneID:1101566;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SC9B2.12
NC_003888.3	RefSeq	gene	6728774	6729088	.	-	.	ID=gene6188;Dbxref=GeneID:1101567;Name=SC9B2.13c;gbkey=Gene;gene=SC9B2.13c;gene_biotype=protein_coding;gene_synonym=SC9B2.13c;locus_tag=SCO6126
NC_003888.3	RefSeq	CDS	6728774	6729088	.	-	0	ID=cds6068;Parent=gene6188;Dbxref=Genbank:NP_630232.1,GeneID:1101567;Name=NP_630232.1;Note=SC9B2.13c%2C unknown%2C len: 104 aa;gbkey=CDS;gene=SC9B2.13c;product=hypothetical protein;protein_id=NP_630232.1;transl_table=11
NC_003888.3	RefSeq	gene	6729231	6730739	.	+	.	ID=gene6189;Dbxref=GeneID:1101568;Name=SC9B2.14;gbkey=Gene;gene=SC9B2.14;gene_biotype=protein_coding;gene_synonym=SC9B2.14;locus_tag=SCO6127
NC_003888.3	RefSeq	CDS	6729231	6730739	.	+	0	ID=cds6069;Parent=gene6189;Dbxref=Genbank:NP_630233.1,GeneID:1101568;Name=NP_630233.1;Note=SC9B2.14%2C probable carboxylesterase%2C len: 502aa%3B similar to many both prokaryotic and eukaryotic eg. SW:PCD_ARTOX phenylcarbamate hydrolase%2C Pcd%2C from Arthrobacter oxidans (493 aa) fasta scores%3B opt: 924%2C z-score: 897.3%2C E(): 0%2C (37.2%25 identity in 503 aa overlap). Contains PS00122 Carboxylesterases type-B serine active site and 2x Pfam match to entry PF00135 COesterase%2C Carboxylesterases.;gbkey=CDS;gene=SC9B2.14;product=carboxylesterase;protein_id=NP_630233.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6729252	6730166	.	+	.	ID=id8075;Dbxref=GeneID:1101568;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterases%2C score 264.30%2C E-value 5.3e-77;gbkey=misc_feature;gene=SC9B2.14
NC_003888.3	RefSeq	sequence_feature	6729762	6729809	.	+	.	ID=id8076;Dbxref=GeneID:1101568;Note=PS00122 Carboxylesterases type-B serine active site.;gbkey=misc_feature;gene=SC9B2.14
NC_003888.3	RefSeq	sequence_feature	6730314	6730586	.	+	.	ID=id8077;Dbxref=GeneID:1101568;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterases%2C score 22.00%2C E-value 7.9e-06;gbkey=misc_feature;gene=SC9B2.14
NC_003888.3	RefSeq	gene	6730693	6730926	.	-	.	ID=gene6190;Dbxref=GeneID:1101569;Name=SC9B2.15c;gbkey=Gene;gene=SC9B2.15c;gene_biotype=protein_coding;gene_synonym=SC9B2.15c;locus_tag=SCO6128
NC_003888.3	RefSeq	CDS	6730693	6730926	.	-	0	ID=cds6070;Parent=gene6190;Dbxref=Genbank:NP_630234.1,GeneID:1101569;Name=NP_630234.1;Note=SC9B2.15c%2C unknown%2C len: 77 aa%3B similar to three proteins of unknown function from Streptomyces coelicolor egs. TR:O86600 (EMBL:AL031514) (81 aa) fasta scores%3B opt: 283%2C z-score: 412.5%2C E(): 1.1e-15%2C (54.7%25 identity in 75 aa overlap) and TR:Q53896 (EMBL:X60316) ORFD from the AbaA locus (75 aa) fasta scores%3B opt: 117%2C z-score: 182.4%2C E(): 0.0071%2C (46.2%25 identity in 52 aa overlap). Contains a 2x20 residue degenerate direct repeat%2C WFKSSYSG*EGGNC*EVA*E.;gbkey=CDS;gene=SC9B2.15c;product=hypothetical protein;protein_id=NP_630234.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6730786	6730904	.	+	.	ID=id8078;Note=2x20 residue degenerate direct repeat%2C WFKSSYSG*EGGNC*EVA*E.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	6730923	6731834	.	-	.	ID=gene6191;Dbxref=GeneID:1101570;Name=SC9B2.16c;gbkey=Gene;gene=SC9B2.16c;gene_biotype=protein_coding;gene_synonym=SC9B2.16c;locus_tag=SCO6129
NC_003888.3	RefSeq	CDS	6730923	6731834	.	-	0	ID=cds6071;Parent=gene6191;Dbxref=Genbank:NP_630235.1,GeneID:1101570;Name=NP_630235.1;Note=SC9B2.16c%2C possible DNA-binding protein%2C len: 303aa%3B similar to proteins of unknown function egs. TR:O86676 (EMBL:AL031371) hypothetical 30.7 kD protein from Streptomyces coelicolor (277 aa) fasta scores%3B opt: 552%2C z-score: 663.3%2C E(): 1.2e-29%2C (37.7%25 identity in 257 aa overlap) and SW:ENTD_SALTY EntD%2C a protein from Salmonella typhimurium with undefined involvement in enterobactin biosynthesis (232 aa) fasta scores%3B opt: 102%2C z-score: 129.9%2C E(): 6%2C (26.7%25 identity in 191 aa overlap). Contains a probable helix-turn-helix (+3.37 SD) at residues 60 to 81;gbkey=CDS;gene=SC9B2.16c;product=DNA-binding protein;protein_id=NP_630235.1;transl_table=11
NC_003888.3	RefSeq	gene	6731917	6732270	.	+	.	ID=gene6192;Dbxref=GeneID:1101571;Name=SC9B2.17;gbkey=Gene;gene=SC9B2.17;gene_biotype=protein_coding;gene_synonym=SC9B2.17;locus_tag=SCO6130
NC_003888.3	RefSeq	CDS	6731917	6732270	.	+	0	ID=cds6072;Parent=gene6192;Dbxref=Genbank:NP_630236.1,GeneID:1101571;Name=NP_630236.1;Note=SC9B2.17%2C unknown%2C len: 117 aa%3B similar to many proteins of undefined function some of which are proposed to be regulatory proteins (by similarity) eg. TR:Q53897 (EMBL:X60316) ORFA of the AbaA locus from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 255%2C z-score: 325.2%2C E(): 7.9e-11%2C (40.9%25 identity in 110 aa overlap) and TR:E1359165 (EMBL:AL034446) regulatory protein from Streptomyces coelicolor (135 aa) fasta scores%3B opt: 234%2C z-score: 301.8%2C E(): 1.6e-09%2C (43.0%25 identity in 121 aa overlap).;gbkey=CDS;gene=SC9B2.17;product=hypothetical protein;protein_id=NP_630236.1;transl_table=11
NC_003888.3	RefSeq	gene	6732336	6733691	.	-	.	ID=gene6193;Dbxref=GeneID:1101572;Name=SC9B2.18c;gbkey=Gene;gene=SC9B2.18c;gene_biotype=protein_coding;gene_synonym=SC9B2.18c;locus_tag=SCO6131
NC_003888.3	RefSeq	CDS	6732336	6733691	.	-	0	ID=cds6073;Parent=gene6193;Dbxref=Genbank:NP_630237.1,GeneID:1101572;Name=NP_630237.1;Note=SC9B2.18c%2C probable carboxypeptidase%2C len: 451aa%3B similar to SW:DAC_ACTSP D-alanyl-D-alanine carboxypeptidase precursor from Actinomadura sp. (strain R39) (538 aa) fasta scores%3B opt: 399%2C z-score: 430.8%2C E(): 1e-16%2C (30.9%25 identity in 512 aa overlap) and PBP4_ECOLI penicillin-binding protein 4 precursor (PBP-4) (D-alanyl-D-alanine carboxypeptidase) from Escherichia coli (477 aa) fasta scores%3B opt: 383%2C z-score: 414.4%2C E(): 8.6e-16%2C (29.4%25 identity in 445 aa overlap). Contains probable hydrophobic membrane spanning region;gbkey=CDS;gene=SC9B2.18c;product=carboxypeptidase;protein_id=NP_630237.1;transl_table=11
NC_003888.3	RefSeq	gene	6733884	6734480	.	-	.	ID=gene6194;Dbxref=GeneID:1101573;Name=SC9B2.19c;gbkey=Gene;gene=SC9B2.19c;gene_biotype=protein_coding;gene_synonym=SC9B2.19c;locus_tag=SCO6132
NC_003888.3	RefSeq	CDS	6733884	6734480	.	-	0	ID=cds6074;Parent=gene6194;Dbxref=Genbank:NP_630238.1,GeneID:1101573;Name=NP_630238.1;Note=SC9B2.19c%2C possible integral membrane protein%2C len: 198 aa%3B contains several possible membrane spanning regions.;gbkey=CDS;gene=SC9B2.19c;product=hypothetical protein;protein_id=NP_630238.1;transl_table=11
NC_003888.3	RefSeq	gene	6734477	6735859	.	-	.	ID=gene6195;Dbxref=GeneID:1101574;Name=SC9B2.20c;gbkey=Gene;gene=SC9B2.20c;gene_biotype=protein_coding;gene_synonym=SC9B2.20c;locus_tag=SCO6133
NC_003888.3	RefSeq	CDS	6734477	6735859	.	-	0	ID=cds6075;Parent=gene6195;Dbxref=Genbank:NP_630239.1,GeneID:1101574;Name=NP_630239.1;Note=SC9B2.20c%2C membrane protein%2C len: 460 aa%3B similar to many eg. TR:O53313 (EMBL:AL021646) hypothetical protein from Mycobacterium tuberculosis (423 aa) fasta scores%3B opt: 666%2C z-score: 620.8%2C E(): 2.7e-27%2C (33.6%25 identity in 417 aa overlap). Contains possible membrane spanning hydrophobic region;gbkey=CDS;gene=SC9B2.20c;product=hypothetical protein;protein_id=NP_630239.1;transl_table=11
NC_003888.3	RefSeq	gene	6735856	6736854	.	-	.	ID=gene6196;Dbxref=GeneID:1101575;Name=SC9B2.21c;gbkey=Gene;gene=SC9B2.21c;gene_biotype=protein_coding;gene_synonym=SC9B2.21c;locus_tag=SCO6134
NC_003888.3	RefSeq	CDS	6735856	6736854	.	-	0	ID=cds6076;Parent=gene6196;Dbxref=Genbank:NP_630240.1,GeneID:1101575;Name=NP_630240.1;Note=SC9B2.21c%2C possible regulatory protein%2C len: 332aa%3B similar to many proposed regulators and hypotheticals eg. TR:O53314 (EMBL:AL021646) regulatory protein from Mycobacterium tuberculosis (320 aa) fasta scores%3B opt: 1227%2C z-score: 1374.2%2C E(): 0%2C (60.3%25 identity in 302 aa overlap).;gbkey=CDS;gene=SC9B2.21c;product=regulatory protein;protein_id=NP_630240.1;transl_table=11
NC_003888.3	RefSeq	gene	6736851	6737525	.	-	.	ID=gene6197;Dbxref=GeneID:1101576;Name=SC9B2.22c;gbkey=Gene;gene=SC9B2.22c;gene_biotype=protein_coding;gene_synonym=SC9B2.22c;locus_tag=SCO6135
NC_003888.3	RefSeq	CDS	6736851	6737525	.	-	0	ID=cds6077;Parent=gene6197;Dbxref=Genbank:NP_630241.1,GeneID:1101576;Name=NP_630241.1;Note=SC9B2.22c%2C membrane protein%2C len: 224 aa%3B similar to SW:Y00U_MYCTU hypothetical protein from Mycobacterium tuberculosis (250 aa) fasta scores%3B opt: 125%2C z-score: 145.6%2C E(): 0.8%2C (26.4%25 identity in 208 aa overlap). Contains 4x5 residue perfect direct repeat%2C QTSVA%2C in the N-terminal region. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9B2.22c;product=hypothetical protein;protein_id=NP_630241.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6737433	6737492	.	-	.	ID=id8079;Dbxref=GeneID:1101576;Note=4x5 residue perfect direct repeat%2C QTSVA.;gbkey=repeat_region;gene=SC9B2.22c
NC_003888.3	RefSeq	gene	6737522	6738541	.	-	.	ID=gene6198;Dbxref=GeneID:1101577;Name=SC9B2.23c;gbkey=Gene;gene=SC9B2.23c;gene_biotype=protein_coding;gene_synonym=SC9B2.23c;locus_tag=SCO6136
NC_003888.3	RefSeq	CDS	6737522	6738541	.	-	0	ID=cds6078;Parent=gene6198;Dbxref=Genbank:NP_630242.1,GeneID:1101577;Name=NP_630242.1;Note=SC9B2.23c%2C possible transmembrane protein%2C unknown function%2C len: 339aa%3B similar to TR:O53316 (EMBL:AL021646)  transmembrane protein from Mycobacterium tuberculosis (319 aa) fasta scores%3B opt: 247%2C z-score: 240.4%2C E(): 4.2e-06%2C (28.2%25 identity in 326 aa overlap). Contains 3 possible membrane spanning regions.;gbkey=CDS;gene=SC9B2.23c;product=transmembrane protein;protein_id=NP_630242.1;transl_table=11
NC_003888.3	RefSeq	gene	6738552	6739466	.	-	.	ID=gene6199;Dbxref=GeneID:1101578;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;gene_synonym=SC1A9.01c,SC9B2.24c;locus_tag=SCO6137
NC_003888.3	RefSeq	CDS	6738552	6739466	.	-	0	ID=cds6079;Parent=gene6199;Dbxref=Genbank:NP_733689.1,GeneID:1101578;Name=NP_733689.1;Note=converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines;gbkey=CDS;gene=mmuM;product=homocysteine methyltransferase;protein_id=NP_733689.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6738816	6738915	.	+	.	ID=id8080;Note=Overlap with Streptomyces coelicolor cosmid 1A9 (EMBL:AL034446).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6739546	6740469	.	+	.	ID=gene6200;Dbxref=GeneID:1101579;Name=SC1A9.02;gbkey=Gene;gene=SC1A9.02;gene_biotype=protein_coding;gene_synonym=SC1A9.02;locus_tag=SCO6138
NC_003888.3	RefSeq	CDS	6739546	6740469	.	+	0	ID=cds6080;Parent=gene6200;Dbxref=Genbank:NP_630243.1,GeneID:1101579;Name=NP_630243.1;Note=SC1A9.02%2C possible transmembrane protein%2C len: 307aa%3B Contains several possible membrane spanning domains.;gbkey=CDS;gene=SC1A9.02;product=transmembrane protein;protein_id=NP_630243.1;transl_table=11
NC_003888.3	RefSeq	gene	6740466	6741632	.	+	.	ID=gene6201;Dbxref=GeneID:1101580;Name=SC1A9.03;gbkey=Gene;gene=SC1A9.03;gene_biotype=protein_coding;gene_synonym=SC1A9.03;locus_tag=SCO6139
NC_003888.3	RefSeq	CDS	6740466	6741632	.	+	0	ID=cds6081;Parent=gene6201;Dbxref=Genbank:NP_630244.1,GeneID:1101580;Name=NP_630244.1;Note=SC1A9.03%2C probable two component sensor kinase%2C len: 388aa%3B similar to a family of sensor kinases egs. TR:Q53893 (EMBL:U51332) AbsA1 from Streptomyces coelicolor (571 aa)%2C fasta scores%3B opt: 389%2C z-score: 278.9%2C E(): 2.9e-08%2C (33.1%25 identity in 405 aa overlap) and UHPB_ECOLI (EMBL:M17102) sensor kinase from Escherichia coli (500 aa)%2C fasta scores%3B opt:221%2C z-score: 248.0%2C E(): 1.5e-06%2C (25.9%25 identity in 398 aa overlap). Contains several possible membrane spanning domains.;gbkey=CDS;gene=SC1A9.03;product=sensor kinase;protein_id=NP_630244.1;transl_table=11
NC_003888.3	RefSeq	gene	6741629	6742288	.	+	.	ID=gene6202;Dbxref=GeneID:1101581;Name=SC1A9.04;gbkey=Gene;gene=SC1A9.04;gene_biotype=protein_coding;gene_synonym=SC1A9.04;locus_tag=SCO6140
NC_003888.3	RefSeq	CDS	6741629	6742288	.	+	0	ID=cds6082;Parent=gene6202;Dbxref=Genbank:NP_630245.1,GeneID:1101581;Name=NP_630245.1;Note=SC1A9.04%2C probable luxR family two-component system response regulator%2C len: 219 aa%3B similar to a family of regulators egs. TR:O69816 (EMBL:AL023496) probable two-component regulator from Streptomyces coelicolor (224 aa) fasta scores%3B opt:714%2C z-score:1103.5%2C E():0%2C (54.8%25 identity in 219 aa overlap) and NARL_ECOLI (EMBL:X13360) nitrate /nitrite response regulator from Escherichia coli (216 aa) fasta scores%3B opt: 465%2C z-score: 656.5%2C E(): 2.7e-29%2C (37.6%25 identity in 213 aa overlap). Contains Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 111.10%2C E-value 2.1e-29%2C Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 79.50%2C E-value 7e-20%2C PS00622 Bacterial regulatory proteins%2C luxR family signature and an helix-turn-helix motif from: 1 to: 219%2C Score 983 (+2.53 SD).;gbkey=CDS;gene=SC1A9.04;product=two-component system response regulator;protein_id=NP_630245.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6741641	6741988	.	+	.	ID=id8081;Dbxref=GeneID:1101581;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 111.10%2C E-value 2.1e-29;gbkey=misc_feature;gene=SC1A9.04
NC_003888.3	RefSeq	sequence_feature	6742091	6742285	.	+	.	ID=id8082;Dbxref=GeneID:1101581;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 79.50%2C E-value 7e-20;gbkey=misc_feature;gene=SC1A9.04
NC_003888.3	RefSeq	sequence_feature	6742142	6742225	.	+	.	ID=id8083;Dbxref=GeneID:1101581;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=SC1A9.04
NC_003888.3	RefSeq	gene	6742307	6742909	.	-	.	ID=gene6203;Dbxref=GeneID:1101582;Name=SC1A9.05c;gbkey=Gene;gene=SC1A9.05c;gene_biotype=protein_coding;gene_synonym=SC1A9.05c;locus_tag=SCO6141
NC_003888.3	RefSeq	CDS	6742307	6742909	.	-	0	ID=cds6083;Parent=gene6203;Dbxref=Genbank:NP_630246.1,GeneID:1101582;Name=NP_630246.1;Note=SC1A9.05c%2C possible transmembrane protein%2C len: 200 aa%3B contains possible membrane spanning hydrophobic regions;gbkey=CDS;gene=SC1A9.05c;product=transmembrane protein;protein_id=NP_630246.1;transl_table=11
NC_003888.3	RefSeq	gene	6742955	6743446	.	+	.	ID=gene6204;Dbxref=GeneID:1101583;Name=SC1A9.06;gbkey=Gene;gene=SC1A9.06;gene_biotype=protein_coding;gene_synonym=SC1A9.06;locus_tag=SCO6142
NC_003888.3	RefSeq	CDS	6742955	6743446	.	+	0	ID=cds6084;Parent=gene6204;Dbxref=Genbank:NP_630247.1,GeneID:1101583;Name=NP_630247.1;Note=SC1A9.06%2C unknown%2C len: 163 aa;gbkey=CDS;gene=SC1A9.06;product=hypothetical protein;protein_id=NP_630247.1;transl_table=11
NC_003888.3	RefSeq	gene	6743443	6744198	.	+	.	ID=gene6205;Dbxref=GeneID:1101584;Name=SC1A9.07;gbkey=Gene;gene=SC1A9.07;gene_biotype=protein_coding;gene_synonym=SC1A9.07;locus_tag=SCO6143
NC_003888.3	RefSeq	CDS	6743443	6744198	.	+	0	ID=cds6085;Parent=gene6205;Dbxref=Genbank:NP_630248.1,GeneID:1101584;Name=NP_630248.1;Note=SC1A9.07%2C hypothetical protein%2C len: 251 aa%3B similar to TR:O33986 (EMBL:U82823) hypothetical protein from Saccharopolyspora erythraea (266 aa)%2C fasta scores%3B opt: 740%2C z-score: 869.0%2C E(): 0%2C (53.4%25 identity in 251 aa overlap);gbkey=CDS;gene=SC1A9.07;product=hypothetical protein;protein_id=NP_630248.1;transl_table=11
NC_003888.3	RefSeq	gene	6744201	6744770	.	-	.	ID=gene6206;Dbxref=GeneID:1101585;Name=SC1A9.08c;gbkey=Gene;gene=SC1A9.08c;gene_biotype=protein_coding;gene_synonym=SC1A9.08c;locus_tag=SCO6144
NC_003888.3	RefSeq	CDS	6744201	6744770	.	-	0	ID=cds6086;Parent=gene6206;Dbxref=Genbank:NP_630249.1,GeneID:1101585;Name=NP_630249.1;Note=SC1A9.08c%2C possible transcriptional regulator%2C len: 189 aa%3B similar to TR:O34892 (EMBL:AF027868) proposed transcriptional regulator from Bacillus subtilis (191 aa) fasta scores%3B opt: 302%2C z-score: 488.2%2C E(): 6.6e-20%2C (31.8%25 identity in 173 aa overlap). Contains an helix-turn-helix motif from: 1 to: 189%2C Score 1074 (+2.84 SD).;gbkey=CDS;gene=SC1A9.08c;product=transcriptional regulator;protein_id=NP_630249.1;transl_table=11
NC_003888.3	RefSeq	gene	6744922	6746640	.	+	.	ID=gene6207;Dbxref=GeneID:1101586;Name=SC1A9.09;gbkey=Gene;gene=SC1A9.09;gene_biotype=protein_coding;gene_synonym=SC1A9.09;locus_tag=SCO6145
NC_003888.3	RefSeq	CDS	6744922	6746640	.	+	0	ID=cds6087;Parent=gene6207;Dbxref=Genbank:NP_630250.1,GeneID:1101586;Name=NP_630250.1;Note=SC1A9.09%2C unknown%2C len: 572 aa%3B Contains His rich extreme N-terminal.;gbkey=CDS;gene=SC1A9.09;product=hypothetical protein;protein_id=NP_630250.1;transl_table=11
NC_003888.3	RefSeq	gene	6746637	6747161	.	+	.	ID=gene6208;Dbxref=GeneID:1101587;Name=SC1A9.10;gbkey=Gene;gene=SC1A9.10;gene_biotype=protein_coding;gene_synonym=SC1A9.10;locus_tag=SCO6146
NC_003888.3	RefSeq	CDS	6746637	6747161	.	+	0	ID=cds6088;Parent=gene6208;Dbxref=Genbank:NP_630251.1,GeneID:1101587;Name=NP_630251.1;Note=SC1A9.10%2C unknown%2C len: 174 aa;gbkey=CDS;gene=SC1A9.10;product=hypothetical protein;protein_id=NP_630251.1;transl_table=11
NC_003888.3	RefSeq	gene	6747192	6748448	.	-	.	ID=gene6209;Dbxref=GeneID:1101588;Name=aldo;gbkey=Gene;gene=aldo;gene_biotype=protein_coding;gene_synonym=SC1A9.11c;locus_tag=SCO6147
NC_003888.3	RefSeq	CDS	6747192	6748448	.	-	0	ID=cds6089;Parent=gene6209;Dbxref=Genbank:NP_630252.1,GeneID:1101588;Name=NP_630252.1;Note=Catalyses the selective oxidation of primary alcohols into the corresponding aldehydes. The enzyme preferably acts on alditols   (e.g. xylitol%2C sorbitol%2C mannitol%2C threitol). The enzyme follows a ternary compelx mechanism. For xylitol the product is solely D-xylose. The enzyme contains a covalently linked FAD cofactor per enzyme molecule (the FAD cofactor is linked to His46). The enzyme is monomeric and belongs to the 'vanillyl-alcohol oxidase' family of flavoprotein (VAO-family).;gbkey=CDS;gene=aldo;product=alditol oxidase;protein_id=NP_630252.1;transl_table=11
NC_003888.3	RefSeq	gene	6748555	6749883	.	+	.	ID=gene6210;Dbxref=GeneID:1101589;Name=SC1A9.12;gbkey=Gene;gene=SC1A9.12;gene_biotype=protein_coding;gene_synonym=SC1A9.12;locus_tag=SCO6148
NC_003888.3	RefSeq	CDS	6748555	6749883	.	+	0	ID=cds6090;Parent=gene6210;Dbxref=Genbank:NP_630253.1,GeneID:1101589;Name=NP_630253.1;Note=SC1A9.12%2C unknown%2C len: 442 aa;gbkey=CDS;gene=SC1A9.12;product=hypothetical protein;protein_id=NP_630253.1;transl_table=11
NC_003888.3	RefSeq	gene	6750131	6751231	.	+	.	ID=gene6211;Dbxref=GeneID:1101590;Name=SC1A9.13;gbkey=Gene;gene=SC1A9.13;gene_biotype=protein_coding;gene_synonym=SC1A9.13;locus_tag=SCO6149
NC_003888.3	RefSeq	CDS	6750131	6751231	.	+	0	ID=cds6091;Parent=gene6211;Dbxref=Genbank:NP_630254.1,GeneID:1101590;Name=NP_630254.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;gene=SC1A9.13;product=ribosome-associated GTPase;protein_id=NP_630254.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6750752	6750775	.	+	.	ID=id8084;Dbxref=GeneID:1101590;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1A9.13
NC_003888.3	RefSeq	gene	6751304	6752737	.	+	.	ID=gene6212;Dbxref=GeneID:1101591;Name=SC1A9.14;gbkey=Gene;gene=SC1A9.14;gene_biotype=protein_coding;gene_synonym=SC1A9.14;locus_tag=SCO6150
NC_003888.3	RefSeq	CDS	6751304	6752737	.	+	0	ID=cds6092;Parent=gene6212;Dbxref=Genbank:NP_630255.1,GeneID:1101591;Name=NP_630255.1;Note=SC1A9.14%2C possible ADA-like regulatory protein%2C len: 477 aa%3B similar to ADA_MYCTU (EMBL:Z73902) ADA regulatory protein from Mycobacterium tuberculosis (496 aa) fasta scores%3B opt: 1135%2C z-score: 1376.3%2C E(): 0%2C (51.6%25 identity in 486 aa overlap). Also note N-terminal region similar to N-terminal region of ADA_ECOLI (EMBL:M10211) ADA regulatory protein from Escherichia coli (354 aa) fasta scores%3B opt: 302%2C z-score: 255.8%2C E(): 5.7e-07%2C (34.5%25 identity in 171 aa overlap) and C-terminal region similar to 3MG2_ECOLI AlkA%2C 3-methyladenine DNA glycosylase II involved in DNA repair (282 aa) fasta scores%3B opt: 171%2C z-score: 232.9%2C E(): 1.1e-05%2C (30.0%25 identity in 290 aa overlap). Contains Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 72.90%2C E-value 6.7e-18 and PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=CDS;gene=SC1A9.14;product=ADA-like regulatory protein;protein_id=NP_630255.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6751634	6751894	.	+	.	ID=id8085;Dbxref=GeneID:1101591;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 72.90%2C E-value 6.7e-18;gbkey=misc_feature;gene=SC1A9.14
NC_003888.3	RefSeq	sequence_feature	6751745	6751873	.	+	.	ID=id8086;Dbxref=GeneID:1101591;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=SC1A9.14
NC_003888.3	RefSeq	gene	6752734	6753294	.	+	.	ID=gene6213;Dbxref=GeneID:1101592;Name=SC1A9.15;gbkey=Gene;gene=SC1A9.15;gene_biotype=protein_coding;gene_synonym=SC1A9.15;locus_tag=SCO6151
NC_003888.3	RefSeq	CDS	6752734	6753294	.	+	0	ID=cds6093;Parent=gene6213;Dbxref=Genbank:NP_630256.1,GeneID:1101592;Name=NP_630256.1;Note=SC1A9.15%2C ogt%2C methylated-DNA-protein-cysteine methyltransferase len: 186 aa%3B similar to many eg. DAT1_BACSU (EMBL:X15659) methylated-DNA-protein-cysteine methyltransferase from Bacillus subtilis (165 aa) fasta scores%3B opt:357%2C z-score: 478.2%2C E(): 2.3e-19%2C (41.4%25 identity in 157 aa overlap). Contains Pfam match to entry PF01035 Methyltrans%2C 6-O-methylguanine DNA methyltransferase%2C score 170.70%2C E-value 2.5e-47.;gbkey=CDS;gene=SC1A9.15;product=methylated-DNA-protein-cysteine methyltransferase;protein_id=NP_630256.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6752926	6753261	.	+	.	ID=id8087;Dbxref=GeneID:1101592;Note=Pfam match to entry PF01035 Methyltrans%2C 6-O-methylguanine DNA methyltransferase%2C score 170.70%2C E-value 2.5e-47;gbkey=misc_feature;gene=SC1A9.15
NC_003888.3	RefSeq	gene	6753257	6753739	.	-	.	ID=gene6214;Dbxref=GeneID:1101593;Name=SC1A9.16c;gbkey=Gene;gene=SC1A9.16c;gene_biotype=protein_coding;gene_synonym=SC1A9.16c;locus_tag=SCO6152
NC_003888.3	RefSeq	CDS	6753257	6753739	.	-	0	ID=cds6094;Parent=gene6214;Dbxref=Genbank:NP_630257.1,GeneID:1101593;Name=NP_630257.1;Note=SC1A9.16c%2C small hydrophobic protein (membrane protein)%2C len: 160 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC1A9.16c;product=small hydrophobic protein membrane protein;protein_id=NP_630257.1;transl_table=11
NC_003888.3	RefSeq	gene	6753801	6754784	.	-	.	ID=gene6215;Dbxref=GeneID:1101594;Name=SC1A9.17c;gbkey=Gene;gene=SC1A9.17c;gene_biotype=protein_coding;gene_synonym=SC1A9.17c;locus_tag=SCO6153
NC_003888.3	RefSeq	CDS	6753801	6754784	.	-	0	ID=cds6095;Parent=gene6215;Dbxref=Genbank:NP_630258.1,GeneID:1101594;Name=NP_630258.1;Note=SC1A9.17c%2C possible regulatory protein%2C len: 424 aa%3B similar to TR:Q56084 (EMBL:D63904) ESA36 protein of undefined function from Streptomyces thermoviolaceus (334 aa) fasta scores%3B opt: 313%2C z-score: 401.9%2C E(): 4.1e-15%2C (30.0%25 identity in 337 aa overlap). Also similar to SW:BRPA_STRHY bialaphos biosynthetic pathway regulatory protein from Streptomyces hygroscopicus (256 aa)%2C fasta scores%3B opt: 234%2C z-score: 233.8%2C E(): 9.5e-06%2C (30.1%25 identity in 163 aa overlap). Contains helix-turn-helix motif from: 1 to: 424%2C Score 1064 (+2.81 SD). Possible coiled-coil from 171 to 200 (30 residues) Max score: 1.447 (probability 0.87);gbkey=CDS;gene=SC1A9.17c;product=regulatory protein;protein_id=NP_630258.1;transl_table=11
NC_003888.3	RefSeq	gene	6755707	6756879	.	+	.	ID=gene6216;Dbxref=GeneID:1101595;Name=SC1A9.18;gbkey=Gene;gene=SC1A9.18;gene_biotype=protein_coding;gene_synonym=SC1A9.18;locus_tag=SCO6154
NC_003888.3	RefSeq	CDS	6755707	6756879	.	+	0	ID=cds6096;Parent=gene6216;Dbxref=Genbank:NP_630259.1,GeneID:1101595;Name=NP_630259.1;Note=SC1A9.18%2C unknown%2C len: 390 aa;gbkey=CDS;gene=SC1A9.18;product=hypothetical protein;protein_id=NP_630259.1;transl_table=11
NC_003888.3	RefSeq	gene	6756908	6758650	.	+	.	ID=gene6217;Dbxref=GeneID:1101596;Name=SC1A9.19;gbkey=Gene;gene=SC1A9.19;gene_biotype=protein_coding;gene_synonym=SC1A9.19;locus_tag=SCO6155
NC_003888.3	RefSeq	CDS	6756908	6758650	.	+	0	ID=cds6097;Parent=gene6217;Dbxref=Genbank:NP_630260.1,GeneID:1101596;Name=NP_630260.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;gene=SC1A9.19;product=pyruvate dehydrogenase;protein_id=NP_630260.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6756947	6758494	.	+	.	ID=id8088;Dbxref=GeneID:1101596;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes%2C score 499.70%2C E-value 2.4e-154;gbkey=misc_feature;gene=SC1A9.19
NC_003888.3	RefSeq	gene	6758794	6759201	.	+	.	ID=gene6218;Dbxref=GeneID:1101597;Name=SC1A9.20;gbkey=Gene;gene=SC1A9.20;gene_biotype=protein_coding;gene_synonym=SC1A9.20;locus_tag=SCO6156
NC_003888.3	RefSeq	CDS	6758794	6759201	.	+	0	ID=cds6098;Parent=gene6218;Dbxref=Genbank:NP_630261.1,GeneID:1101597;Name=NP_630261.1;Note=SC1A9.20%2C possible regulatory protein%2C len: 135aa%3B similar to TR:O69204 (EMBL:U33059) hypothetical protein from Amycolatopsis mediterranei S699 (144 aa) fasta scores%3B opt:225%2C z-score:335.1. E(): 2.2e-11%2C (41.7%25 identity in 115 aa overlap). Also similar to TR:Q53897 (EMBL:X60316) AbaA regulatory locus for antibiotic production in Streptomyces coelicolor (192 aa)%2C fasta scores%3B opt: 155%2C z-score: 284.6%2C E(): 1.4e-08%2C (33.3%25 identity in 120 aa overlap);gbkey=CDS;gene=SC1A9.20;product=regulatory protein;protein_id=NP_630261.1;transl_table=11
NC_003888.3	RefSeq	gene	6759259	6760323	.	-	.	ID=gene6219;Dbxref=GeneID:1101598;Name=SC1A9.21c;gbkey=Gene;gene=SC1A9.21c;gene_biotype=protein_coding;gene_synonym=SC1A9.21c;locus_tag=SCO6157
NC_003888.3	RefSeq	CDS	6759259	6760323	.	-	0	ID=cds6099;Parent=gene6219;Dbxref=Genbank:NP_630262.1,GeneID:1101598;Name=NP_630262.1;Note=SC1A9.21c%2C possible transmembrane protein%2C len: 354 aa%3B contains possible membrane spanning hydrophobic domains in the N-terminal region and possible coiled-coil from 221 to 250 (30 residues) Max score: 1.449 (probability 0.87);gbkey=CDS;gene=SC1A9.21c;product=transmembrane protein;protein_id=NP_630262.1;transl_table=11
NC_003888.3	RefSeq	gene	6760581	6761426	.	-	.	ID=gene6220;Dbxref=GeneID:1101599;Name=SC1A9.22c;gbkey=Gene;gene=SC1A9.22c;gene_biotype=protein_coding;gene_synonym=SC1A9.22c;locus_tag=SCO6158
NC_003888.3	RefSeq	CDS	6760581	6761426	.	-	0	ID=cds6100;Parent=gene6220;Dbxref=Genbank:NP_630263.1,GeneID:1101599;Name=NP_630263.1;Note=SC1A9.22c%2C unknown%2C len: 281 aa;gbkey=CDS;gene=SC1A9.22c;product=hypothetical protein;protein_id=NP_630263.1;transl_table=11
NC_003888.3	RefSeq	gene	6761595	6762416	.	+	.	ID=gene6221;Dbxref=GeneID:1101600;Name=SC1A9.23;gbkey=Gene;gene=SC1A9.23;gene_biotype=protein_coding;gene_synonym=SC1A9.23;locus_tag=SCO6159
NC_003888.3	RefSeq	CDS	6761595	6762416	.	+	0	ID=cds6101;Parent=gene6221;Dbxref=Genbank:NP_630264.1,GeneID:1101600;Name=NP_630264.1;Note=SC1A9.23%2C possible gntR family transcriptional regulator%2C len: 273 aa%3B similar to TR:O69996 (EMBL:AL022374) WhiH%2C sporulation transcription factor from Streptomyces coelicolor (295 aa) fasta scores%3B opt: 139%2C z-score: 267.9%2C E(): 1.2e-07%2C (29.8%25 identity in 292 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 30.50%2C E-value 7.1e-08.;gbkey=CDS;gene=SC1A9.23;product=GntR family transcriptional regulator;protein_id=NP_630264.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6761823	6761999	.	+	.	ID=id8089;Dbxref=GeneID:1101600;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 30.50%2C E-value 7.1e-08;gbkey=misc_feature;gene=SC1A9.23
NC_003888.3	RefSeq	gene	6762662	6765049	.	-	.	ID=gene6222;Dbxref=GeneID:1101601;Name=SC1A9.24c;gbkey=Gene;gene=SC1A9.24c;gene_biotype=protein_coding;gene_synonym=SC1A9.24c;locus_tag=SCO6160
NC_003888.3	RefSeq	CDS	6762662	6765049	.	-	0	ID=cds6102;Parent=gene6222;Dbxref=Genbank:NP_630265.1,GeneID:1101601;Name=NP_630265.1;Note=part of the preprotein secretory system%3B forms a complex with protein YajC%3B SecDFyajC stimulates the proton motive force-driven protein translocation%2C seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane%3B in some organisms%2C such as Bacillus subtilis%2C SecD is fused to SecF;gbkey=CDS;gene=SC1A9.24c;product=bifunctional preprotein translocase subunit SecD/SecF;protein_id=NP_630265.1;transl_table=11
NC_003888.3	RefSeq	gene	6765129	6765518	.	-	.	ID=gene6223;Dbxref=GeneID:1101602;Name=SC1A9.25c;gbkey=Gene;gene=SC1A9.25c;gene_biotype=protein_coding;gene_synonym=SC1A9.25c;locus_tag=SCO6161
NC_003888.3	RefSeq	CDS	6765129	6765518	.	-	0	ID=cds6103;Parent=gene6223;Dbxref=Genbank:NP_630266.1,GeneID:1101602;Name=NP_630266.1;Note=SC1A9.25c%2C probable hypothetical protein%2C len: 129 aa%3B Contains a strong N-terminal signal sequence;gbkey=CDS;gene=SC1A9.25c;product=hypothetical protein;protein_id=NP_630266.1;transl_table=11
NC_003888.3	RefSeq	gene	6765623	6766405	.	-	.	ID=gene6224;Dbxref=GeneID:1101603;Name=SC1A9.26c;gbkey=Gene;gene=SC1A9.26c;gene_biotype=protein_coding;gene_synonym=SC1A9.26c;locus_tag=SCO6162
NC_003888.3	RefSeq	CDS	6765623	6766405	.	-	0	ID=cds6104;Parent=gene6224;Dbxref=Genbank:NP_630267.1,GeneID:1101603;Name=NP_630267.1;Note=SC1A9.26c%2C probable luxR family two-component system response regulator%2C len: 260aa%3B similar to a family of response regulators eg. TR:O69961 (EMBL:AL022268) probable two-component transcriptional regulator from Streptomyces coelicolor (219 aa) fasta scores%3B opt:1079%2C z-score: 1434.4%2C E():0%2C (77.5%25 identity in 218 aa overlap) and DEGU_BACBR (EMBL:L15444) transcriptional activator protein DegU from Bacillus brevis (236 aa) fasta scores%3B opt:378%2C z-score: 682.5%2C E(): 9.7e-31%2C (36.6%25 identity in 227 aa overlap). Contains PS00622 Bacterial regulatory proteins%2C luxR family signature%2C Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 99.70%2C E-value 5.6e-26%2C Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 132.90%2C E-value 5.6e-36 and an helix-turn-helix motif from: 1 to: 260%2C Score 1221 (+3.35 SD).;gbkey=CDS;gene=SC1A9.26c;product=two-component system response regulator;protein_id=NP_630267.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6765689	6765772	.	-	.	ID=id8090;Dbxref=GeneID:1101603;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=SC1A9.26c
NC_003888.3	RefSeq	sequence_feature	6765767	6766108	.	-	.	ID=id8091;Dbxref=GeneID:1101603;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 132.90%2C E-value 5.6e-36;gbkey=misc_feature;gene=SC1A9.26c
NC_003888.3	RefSeq	sequence_feature	6766208	6766405	.	-	.	ID=id8092;Dbxref=GeneID:1101603;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 99.70%2C E-value 5.6e-26;gbkey=misc_feature;gene=SC1A9.26c
NC_003888.3	RefSeq	gene	6766414	6767325	.	-	.	ID=gene6225;Dbxref=GeneID:1101604;Name=SC1A9.27c;gbkey=Gene;gene=SC1A9.27c;gene_biotype=protein_coding;gene_synonym=SC1A9.27c;locus_tag=SCO6163
NC_003888.3	RefSeq	CDS	6766414	6767325	.	-	0	ID=cds6105;Parent=gene6225;Dbxref=Genbank:NP_630268.1,GeneID:1101604;Name=NP_630268.1;Note=SC1A9.27c%2C probable sensor kinase%2C len: 303aa%3B similar to a family of sensor kinases eg. TR:O69960 (EMBL:AL022268) probable two-component sensor protein from Streptomyces coelicolor (358 aa) fasta scores%3B opt:1037%2C z-score: 1477.8%2C E():0%2C (59.2%25 identity in 299 aa overlap) and TR:Q52558 (EMBL:U02041) two-component sensor regulating virulence genes of Pseudomonas solanacearum (502 aa) fasta scores%3B opt: 388%2C z-score: 475.5%2C E():3.3e-19%2C (31.5%25 identity in 270 aa overlap). Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC1A9.27c;product=sensor kinase;protein_id=NP_630268.1;transl_table=11
NC_003888.3	RefSeq	gene	6767705	6768031	.	+	.	ID=gene6226;Dbxref=GeneID:1101605;Name=SC1A9.28c;gbkey=Gene;gene=SC1A9.28c;gene_biotype=protein_coding;gene_synonym=SC1A9.28c;locus_tag=SCO6164
NC_003888.3	RefSeq	CDS	6767705	6768031	.	+	0	ID=cds6106;Parent=gene6226;Dbxref=Genbank:NP_630269.1,GeneID:1101605;Name=NP_630269.1;Note=SC1A9.28c%2C unknown%2C len: 192aa%3B some similarity to TR:O66611 (EMBL:AE000680) protein from Aquifex aeolicus (145 aa) fasta scores%3B opt: 188%2C z-score: 294.0%2C E():4.4e-09%2C (36.6%25 identity in 93 aa overlap);gbkey=CDS;gene=SC1A9.28c;product=hypothetical protein;protein_id=NP_630269.1;transl_table=11
NC_003888.3	RefSeq	gene	6768101	6768478	.	+	.	ID=gene6227;Dbxref=GeneID:1101606;Name=SC1A9.29c;gbkey=Gene;gene=SC1A9.29c;gene_biotype=protein_coding;gene_synonym=SC1A9.29c,SC6C5.01;locus_tag=SCO6165
NC_003888.3	RefSeq	CDS	6768101	6768478	.	+	0	ID=cds6107;Parent=gene6227;Dbxref=Genbank:NP_733690.1,GeneID:1101606;Name=NP_733690.1;Note=SC6C5.01%2C partial CDS%2C unknown%2C len: 121aa%3B similar to TR:O83134 (EMBL:AE001194) dnaK suppressor from Treponema pallidum (120 aa) fasta scores%3B opt: 162%2C z-score: 252.5%2C E(): 8.9e-07%2C (40.7%25 identity in 59 aa overlap).~SC1A9.29c%2C partial CDS%2C unknown%2C len: 38aa;gbkey=CDS;gene=SC1A9.29c;product=hypothetical protein;protein_id=NP_733690.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6768112	6768226	.	+	.	ID=id8093;Dbxref=GeneID:1101606;Note=Overlap with Streptomyces coelicolor cosmid 1A9.;gbkey=misc_feature;gene=SC1A9.29c
NC_003888.3	RefSeq	gene	6768481	6769299	.	+	.	ID=gene6228;Dbxref=GeneID:1101607;Name=SC6C5.02;gbkey=Gene;gene=SC6C5.02;gene_biotype=protein_coding;gene_synonym=SC6C5.02;locus_tag=SCO6166
NC_003888.3	RefSeq	CDS	6768481	6769299	.	+	0	ID=cds6108;Parent=gene6228;Dbxref=Genbank:NP_630270.1,GeneID:1101607;Name=NP_630270.1;Note=SC6C5.02%2C unknown%2C len: 272aa;gbkey=CDS;gene=SC6C5.02;product=hypothetical protein;protein_id=NP_630270.1;transl_table=11
NC_003888.3	RefSeq	gene	6769408	6770778	.	+	.	ID=gene6229;Dbxref=GeneID:1101608;Name=SC6C5.03;gbkey=Gene;gene=SC6C5.03;gene_biotype=protein_coding;gene_synonym=SC6C5.03;locus_tag=SCO6167
NC_003888.3	RefSeq	CDS	6769408	6770778	.	+	0	ID=cds6109;Parent=gene6229;Dbxref=Genbank:NP_630271.1,GeneID:1101608;Name=NP_630271.1;Note=SC6C5.03%2C proline rich protein (membrane protein)%2C len: 456 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC6C5.03;product=proline rich protein membrane protein;protein_id=NP_630271.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6770061	6770101	.	+	.	ID=id8094;Dbxref=GeneID:1101608;Note=7 x 5bp degenerate repeat%2C GA(C/T)CC.;gbkey=repeat_region;gene=SC6C5.03
NC_003888.3	RefSeq	gene	6770801	6771589	.	-	.	ID=gene6230;Dbxref=GeneID:1101609;Name=SC6C5.04c;gbkey=Gene;gene=SC6C5.04c;gene_biotype=protein_coding;gene_synonym=SC6C5.04c;locus_tag=SCO6168
NC_003888.3	RefSeq	CDS	6770801	6771589	.	-	0	ID=cds6110;Parent=gene6230;Dbxref=Genbank:NP_630272.1,GeneID:1101609;Name=NP_630272.1;Note=SC6C5.04c%2C unknown%2C len: 262aa;gbkey=CDS;gene=SC6C5.04c;product=hypothetical protein;protein_id=NP_630272.1;transl_table=11
NC_003888.3	RefSeq	gene	6771761	6773470	.	-	.	ID=gene6231;Dbxref=GeneID:1101610;Name=SC6C5.05c;gbkey=Gene;gene=SC6C5.05c;gene_biotype=protein_coding;gene_synonym=SC6C5.05c;locus_tag=SCO6169
NC_003888.3	RefSeq	CDS	6771761	6773470	.	-	0	ID=cds6111;Parent=gene6231;Dbxref=Genbank:NP_630273.1,GeneID:1101610;Name=NP_630273.1;Note=SC6C5.05c%2C possible regulatory protein%2C len: 569aa%3B C-terminal similarity to TR:Q00509 (EMBL:X63451) SrmR protein from Streptomyces ambofaciens (604 aa) fasta scores%3B opt: 203%2C z-score: 206.9%2C E(): 0.00031%2C (30.0%25 identity in 207 aa overlap). Contains helix-turn-helix motif from 523 to 544 (+2.73 SD).;gbkey=CDS;gene=SC6C5.05c;product=regulatory protein;protein_id=NP_630273.1;transl_table=11
NC_003888.3	RefSeq	gene	6773787	6774677	.	+	.	ID=gene6232;Dbxref=GeneID:1101611;Name=SC6C5.06;gbkey=Gene;gene=SC6C5.06;gene_biotype=protein_coding;gene_synonym=SC6C5.06;locus_tag=SCO6170
NC_003888.3	RefSeq	CDS	6773787	6774677	.	+	0	ID=cds6112;Parent=gene6232;Dbxref=Genbank:NP_630274.1,GeneID:1101611;Name=NP_630274.1;Note=SC6C5.06%2C probable oxidoreductase subunit%2C len: 296aa%3B similar to many%2C both prokaryotic and eukaryotic egs. TR:Q59127 (EMBL:X75338) nicotine dehydrogenase from Arthrobacter nicotinovorans (283 aa) fasta scores%3B opt: 308%2C z-score: 490.8%2C E(): 4.8e-20%2C (29.9%25 identity in 281 aa overlap) and SW:XDH_DROPS xanthine dehydrogenase from Drosophila pseudoobscura (1342 aa) fasta scores%3B opt: 146%2C z-score: 404.4%2C E(): 3.1e-15%2C (31.3%25 identity in 240 aa overlap). Contains Pfam match to entry PF00941 dehydrog_molyb%2C Molybdopterin binding domain in dehydrogenase%2C score 41.00%2C E-value 1.2e-12.;gbkey=CDS;gene=SC6C5.06;product=oxidoreductase subunit;protein_id=NP_630274.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6773787	6774623	.	+	.	ID=id8095;Dbxref=GeneID:1101611;Note=Pfam match to entry PF00941 dehydrog_molyb%2C Molybdopterin binding domain in dehydrogenase%2C score 41.00%2C E-value 1.2e-12;gbkey=misc_feature;gene=SC6C5.06
NC_003888.3	RefSeq	gene	6774677	6775267	.	+	.	ID=gene6233;Dbxref=GeneID:1101612;Name=SC6C5.07;gbkey=Gene;gene=SC6C5.07;gene_biotype=protein_coding;gene_synonym=SC6C5.07;locus_tag=SCO6171
NC_003888.3	RefSeq	CDS	6774677	6775267	.	+	0	ID=cds6113;Parent=gene6233;Dbxref=Genbank:NP_630275.1,GeneID:1101612;Name=NP_630275.1;Note=SC6C5.07%2C probable iron-sulphur binding oxidoreductase subunit%2C len: 196aa%3B similar to many eg. TR:P95635 (EMBL:U65440) 4-hydroxybenzoyl-CoA reductase from Rhodopseudomonas palustris (163 aa) fasta scores%3B opt: 288%2C z-score: 720.8%2C E(): 7.4e-33%2C (42.2%25 identity in 187 aa overlap) and TR:P72223 (EMBL:X98131) quinoline 2-oxidoreductase from Pseudomonas putida (168 aa) fasta scores%3B opt: 264%2C z-score: 703.7%2C E(): 6.6e-32%2C (40.4%25 identity in 198 aa overlap). Contains PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;gbkey=CDS;gene=SC6C5.07;product=oxidoreductase;protein_id=NP_630275.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6774794	6774820	.	+	.	ID=id8096;Dbxref=GeneID:1101612;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=SC6C5.07
NC_003888.3	RefSeq	gene	6775270	6777756	.	+	.	ID=gene6234;Dbxref=GeneID:1101613;Name=SC6C5.08;gbkey=Gene;gene=SC6C5.08;gene_biotype=protein_coding;gene_synonym=SC6C5.08;locus_tag=SCO6172
NC_003888.3	RefSeq	CDS	6775270	6777756	.	+	0	ID=cds6114;Parent=gene6234;Dbxref=Genbank:NP_630276.1,GeneID:1101613;Name=NP_630276.1;Note=SC6C5.08%2C probable oxidoreductase subunit%2C len: 828aa%3B similar to many eg. TR:O32144 (EMBL:Z99120) Yurc protein from Bacillus subtilis (745 aa) fasta scores%3B opt: 626%2C z-score: 1140.2%2C E(): 0%2C (33.1%25 identity in 773 aa overlap) and SW:MOP_DESGI aldehyde oxidoreductase Desulfovibrio gigas (907 aa) fasta scores%3B opt: 538%2C z-score: 893.1%2C E(): 0%2C (29.5%25 identity in 791 aa overlap). Contains Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score 497.50%2C E-value 1e-145.;gbkey=CDS;gene=SC6C5.08;product=oxidoreductase;protein_id=NP_630276.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6775369	6777474	.	+	.	ID=id8097;Dbxref=GeneID:1101613;Note=Pfam match to entry PF01315 Ald_Xan_dh_C%2C Aldehyde oxidase and xanthine dehydrogenase%2C C terminus%2C score 497.50%2C E-value 1e-145;gbkey=misc_feature;gene=SC6C5.08
NC_003888.3	RefSeq	gene	6777908	6779365	.	+	.	ID=gene6235;Dbxref=GeneID:1101614;Name=SC6C5.09;gbkey=Gene;gene=SC6C5.09;gene_biotype=protein_coding;gene_synonym=SC6C5.09;locus_tag=SCO6173
NC_003888.3	RefSeq	CDS	6777908	6779365	.	+	0	ID=cds6115;Parent=gene6235;Dbxref=Genbank:NP_630277.1,GeneID:1101614;Name=NP_630277.1;Note=SC6C5.09%2C probable permease%2C len: 485aa%3B similar to many eg. SW:Y326_METJA hypothetical protein from Methanococcus jannaschii (436 aa) fasta scores%3B opt: 517%2C z-score: 1019.3%2C E(): 0%2C (37.2%25 identity in 454 aa overlap). Contains Pfam match to entry PF00860 xan_ur_permease%2C Xanthine /uracil permeases family%2C score 43.50%2C E-value 4.9e-09.;gbkey=CDS;gene=SC6C5.09;product=permease SC6C509;protein_id=NP_630277.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6778031	6779227	.	+	.	ID=id8098;Dbxref=GeneID:1101614;Note=Pfam match to entry PF00860 xan_ur_permease%2C Xanthine /uracil permeases family%2C score 43.50%2C E-value 4.9e-09;gbkey=misc_feature;gene=SC6C5.09
NC_003888.3	RefSeq	gene	6779417	6780604	.	+	.	ID=gene6236;Dbxref=GeneID:1101615;Name=SC6C5.10;gbkey=Gene;gene=SC6C5.10;gene_biotype=protein_coding;gene_synonym=SC6C5.10;locus_tag=SCO6174
NC_003888.3	RefSeq	CDS	6779417	6780604	.	+	0	ID=cds6116;Parent=gene6236;Dbxref=Genbank:NP_630278.1,GeneID:1101615;Name=NP_630278.1;Note=SC6C5.10%2C conserved hypothetical protein%2C len: 395 aa%3B similar to many eg. TR:O53711 (EMBL:AL021931) hypothetical protein from Mycobacterium tuberculosis (380 aa) fasta scores%3B opt: 1247%2C z-score: 1422.8%2C E(): 0%2C (56.7%25 identity in 372 aa overlap).;gbkey=CDS;gene=SC6C5.10;product=hypothetical protein;protein_id=NP_630278.1;transl_table=11
NC_003888.3	RefSeq	gene	6780609	6781592	.	+	.	ID=gene6237;Dbxref=GeneID:1101616;Name=SC6C5.11;gbkey=Gene;gene=SC6C5.11;gene_biotype=protein_coding;gene_synonym=SC6C5.11;locus_tag=SCO6175
NC_003888.3	RefSeq	CDS	6780609	6781592	.	+	0	ID=cds6117;Parent=gene6237;Dbxref=Genbank:NP_630279.1,GeneID:1101616;Name=NP_630279.1;Note=SC6C5.11%2C hypothetical protein%2C len: 327 aa%3B similar to TR:Q9LAB8 (EMBL:AF144381) Burkholderia gladioli esterase EstC%2C 298 aa%3B fasta scores: opt: 532 Z-score: 590.8 E(): 2.8e-25%3B 38.014%25 identity in 292 aa overlap;gbkey=CDS;gene=SC6C5.11;product=hypothetical protein;protein_id=NP_630279.1;transl_table=11
NC_003888.3	RefSeq	gene	6781601	6782431	.	-	.	ID=gene6238;Dbxref=GeneID:1101617;Name=SC6C5.12c;gbkey=Gene;gene=SC6C5.12c;gene_biotype=protein_coding;gene_synonym=SC6C5.12c;locus_tag=SCO6176
NC_003888.3	RefSeq	CDS	6781601	6782431	.	-	0	ID=cds6118;Parent=gene6238;Dbxref=Genbank:NP_630280.1,GeneID:1101617;Name=NP_630280.1;Note=SC6C5.12c%2C hypothetical protein%2C len: 327 aa%3B similar to TR:Q9S1Z5 (EMBL:AL109747) Streptomyces coelicolor hypothetical protein SCJ21.12c%2C 279 aa%3B fasta scores: opt: 474 Z-score: 525.2 E(): 1.3e-21%3B 41.007%25 identity in 278 aa overlap;gbkey=CDS;gene=SC6C5.12c;product=hypothetical protein;protein_id=NP_630280.1;transl_table=11
NC_003888.3	RefSeq	gene	6782568	6783008	.	-	.	ID=gene6239;Dbxref=GeneID:1101618;Name=SC6C5.13c;gbkey=Gene;gene=SC6C5.13c;gene_biotype=protein_coding;gene_synonym=SC6C5.13c;locus_tag=SCO6177
NC_003888.3	RefSeq	CDS	6782568	6783008	.	-	0	ID=cds6119;Parent=gene6239;Dbxref=Genbank:NP_630281.1,GeneID:1101618;Name=NP_630281.1;Note=SC6C5.13c%2C unknown%2C len: 327aa;gbkey=CDS;gene=SC6C5.13c;product=hypothetical protein;protein_id=NP_630281.1;transl_table=11
NC_003888.3	RefSeq	gene	6783029	6783811	.	-	.	ID=gene6240;Dbxref=GeneID:1101619;Name=SC6C5.14c;gbkey=Gene;gene=SC6C5.14c;gene_biotype=protein_coding;gene_synonym=SC6C5.14c;locus_tag=SCO6178
NC_003888.3	RefSeq	CDS	6783029	6783811	.	-	0	ID=cds6120;Parent=gene6240;Dbxref=Genbank:NP_630282.1,GeneID:1101619;Name=NP_630282.1;Note=SC6C5.14c%2C possible deacetylase (hypothetical protein)%2C len: 260 aa%3B similar to many e.g. SW:NODB_RHILT NodB%2C chitooligosaccharide deacetylase%2C nodulation protein B%2C from Rhizobium leguminosarum (215 aa) fasta scores%3B opt: 321%2C z-score: 420.9%2C E(): 3.7e-16%2C (35.0%25 identity in 197 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC6C5.14c;product=deacetylase;protein_id=NP_630282.1;transl_table=11
NC_003888.3	RefSeq	gene	6783983	6784975	.	+	.	ID=gene6241;Dbxref=GeneID:1101620;Name=SC6C5.15;gbkey=Gene;gene=SC6C5.15;gene_biotype=protein_coding;gene_synonym=SC6C5.15;locus_tag=SCO6179
NC_003888.3	RefSeq	CDS	6783983	6784975	.	+	0	ID=cds6121;Parent=gene6241;Dbxref=Genbank:NP_630283.1,GeneID:1101620;Name=NP_630283.1;Note=SC6C5.15%2C probable nucleotide-sugar dehydratase%2C len: 330 aa%3B similar to many e.g. TR:Q54144 (EMBL:U08223) dTDP-glucose dehydratase from Streptomyces fradiae (333 aa) fasta scores%3B opt: 581%2C z-score: 563.5%2C E(): 4.3e-24%2C (38.4%25 identity in 318 aa overlap).;gbkey=CDS;gene=SC6C5.15;product=nucleotide-sugar dehydratase;protein_id=NP_630283.1;transl_table=11
NC_003888.3	RefSeq	gene	6785096	6786736	.	+	.	ID=gene6242;Dbxref=GeneID:1101621;Name=SC2G5.01;gbkey=Gene;gene=SC2G5.01;gene_biotype=protein_coding;gene_synonym=SC2G5.01,SC6C5.16;locus_tag=SCO6180
NC_003888.3	RefSeq	CDS	6785096	6786736	.	+	0	ID=cds6122;Parent=gene6242;Dbxref=Genbank:NP_733691.1,GeneID:1101621;Name=NP_733691.1;Note=SC2G5.01%2C partial CDS%2C possible transferase%2C len:>187aa%3B constitutes the C-terminal end of SC6C5.16 (EMBL:AL034 492) from Streptomyces coelicolor. Similar to the C-terminal region of many egs. SW:CMCH_NOCLA3'-hydroxymethylcephem- O-carbamoyltransferase%2C a protein involved in cephamycin synthesis in Nocardia lactamdurans(520 aa) fasta scores%3B opt : 373%2C z-score: 451.4%2C E():7.4e-18%2C (40.1%25 identity in 167 aa overlap).~SC6C5.16%2C partial CDS%2C unknown%2C len: 392aa%3B similar to many eg. SW:NOLO_RHISN nodulation associated protein NolNO from Rhizobium sp. (strain NGR234) (680 aa) fasta scores%3B opt: 696%2C z-score: 849.5%2C E(): 0%2C (36.7%25 identity in 403 aa overlap).;gbkey=CDS;gene=SC2G5.01;product=transferase;protein_id=NP_733691.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6786172	6786271	.	+	.	ID=id8099;Dbxref=GeneID:1101621;Note=Overlap with AL034492 Streptomyces coelicolor cosmid 6C5.;gbkey=misc_feature;gene=SC2G5.01
NC_003888.3	RefSeq	gene	6786733	6787767	.	+	.	ID=gene6243;Dbxref=GeneID:1101622;Name=SC2G5.02;gbkey=Gene;gene=SC2G5.02;gene_biotype=protein_coding;gene_synonym=SC2G5.02;locus_tag=SCO6181
NC_003888.3	RefSeq	CDS	6786733	6787767	.	+	0	ID=cds6123;Parent=gene6243;Dbxref=Genbank:NP_630284.1,GeneID:1101622;Name=NP_630284.1;Note=SC2G5.02%2C possible transferase%2C len: 344aa%3B similar to many eg. SW:EXOO_RHIME succinoglycan biosynthesis protein%2C ExoO%2C from Rhizobium meliloti (334 aa) fasta scores%3B opt:177%2C z-score: 202.6%2C E(): 0.00053%2C (29.5%25 identity in 278aa overlap). Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 32.70%2CE-value 8.3e-06.;gbkey=CDS;gene=SC2G5.02;product=transferase;protein_id=NP_630284.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6786775	6787308	.	+	.	ID=id8100;Dbxref=GeneID:1101622;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyltransferases%2C score 32.70%2C E-value 8.3e-06;gbkey=misc_feature;gene=SC2G5.02
NC_003888.3	RefSeq	gene	6787764	6788621	.	+	.	ID=gene6244;Dbxref=GeneID:1101623;Name=SC2G5.03;gbkey=Gene;gene=SC2G5.03;gene_biotype=protein_coding;gene_synonym=SC2G5.03;locus_tag=SCO6182
NC_003888.3	RefSeq	CDS	6787764	6788621	.	+	0	ID=cds6124;Parent=gene6244;Dbxref=Genbank:NP_630285.1,GeneID:1101623;Name=NP_630285.1;Note=SC2G5.03%2C possible dehydratase%2C len: 285aa%3B N-terminal region similar to SW:HIS7_SALTY%2C HisB%2C imidazoleglycerol-phosphate dehydratase (354 aa) from Salmonella typhimurium fasta scores%3B opt: 207%2C z-score:191.1%2C E(): 0.0023%2C (29.4 %25identity in 143 aa overlap). Also similar TR:Q54364 (EMBL:X79146) located within thelincomycin-production gene cluster of Streptomyces lincolnensis 78-11 (190 aa) fasta scores opt: 345%2C z-score:312.0%2C E(): 4.3e-10%2C (40.5%25 identity in 185 aa overlap).;gbkey=CDS;gene=SC2G5.03;product=dehydratase;protein_id=NP_630285.1;transl_table=11
NC_003888.3	RefSeq	gene	6788618	6789625	.	+	.	ID=gene6245;Dbxref=GeneID:1101624;Name=SC2G5.04;gbkey=Gene;gene=SC2G5.04;gene_biotype=protein_coding;gene_synonym=SC2G5.04;locus_tag=SCO6183
NC_003888.3	RefSeq	CDS	6788618	6789625	.	+	0	ID=cds6125;Parent=gene6245;Dbxref=Genbank:NP_630286.1,GeneID:1101624;Name=NP_630286.1;Note=SC2G5.04%2C possible transferase%2C len: 335aa%3B similar to many eg. TR:O05195 (EMBL:U70982) heptosyl transferase I from Pseudomonas aeruginosa (355 aa) a protein known to be involved in the synthesis of lipopolysaccharide%2C fasta scores%3B opt: 240%2C z-score: 250.8%2C E(): 1.1e-06%2C (29.3%25 identity in 324aa overlap). Contains Pfam match to entry PF01075 Heptosyltranf%2C Heptosyl transferase%2C score 35.10%2CE-value7.1e-09.;gbkey=CDS;gene=SC2G5.04;product=transferase;protein_id=NP_630286.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6788831	6789541	.	+	.	ID=id8101;Dbxref=GeneID:1101624;Note=Pfam match to entry PF01075 Heptosyltranf%2C Heptosyltransferase%2C score 35.10%2C E-value 7.1e-09;gbkey=misc_feature;gene=SC2G5.04
NC_003888.3	RefSeq	gene	6789622	6790572	.	+	.	ID=gene6246;Dbxref=GeneID:1101625;Name=SC2G5.05;gbkey=Gene;gene=SC2G5.05;gene_biotype=protein_coding;gene_synonym=SC2G5.05;locus_tag=SCO6184
NC_003888.3	RefSeq	CDS	6789622	6790572	.	+	0	ID=cds6126;Parent=gene6246;Dbxref=Genbank:NP_630287.1,GeneID:1101625;Name=NP_630287.1;Note=SC2G5.05%2C possible transferase%2C len: 312aa%2C C-terminal region similar to C-terminal from many eg. TR:Q47594 (EMBL:D43637) mannosyl transferase B from Escherichia coli fasta scores%3B opt: 149%2C z-score: 178.9%2C E(): 0.011%2C (32.0%25 identity in 150 aa overlap).;gbkey=CDS;gene=SC2G5.05;product=transferase;protein_id=NP_630287.1;transl_table=11
NC_003888.3	RefSeq	gene	6790569	6791789	.	+	.	ID=gene6247;Dbxref=GeneID:1101626;Name=SC2G5.06;gbkey=Gene;gene=SC2G5.06;gene_biotype=protein_coding;gene_synonym=SC2G5.06;locus_tag=SCO6185
NC_003888.3	RefSeq	CDS	6790569	6791789	.	+	0	ID=cds6127;Parent=gene6247;Dbxref=Genbank:NP_630288.1,GeneID:1101626;Name=NP_630288.1;Note=SC2G5.06%2C possible transferase%2C len: 402aa%3B similar to many egs. SW:YV12_MYCTU hypothetical protein from Mycobacterium tuberculosis (480 aa) fasta scores%3B opt: 652%2C z-score: 737.4%2C E(): 0%2C (34.6%25 identity in 408 aa overlap) and TR:O84909 (EMBL:AF010182) glycosyl transferase%2C WbpY from Pseudomonas aeruginosa (371 aa) fasta scores%3B opt: 298%2C z-score: 340.5%2C E(): 1.1e-11%2C (29.4%25 identity in 326 aa overlap). Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 111.00%2C E-value 1.2e-30.;gbkey=CDS;gene=SC2G5.06;product=transferase;protein_id=NP_630288.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6791214	6791687	.	+	.	ID=id8102;Dbxref=GeneID:1101626;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyltransferases group 1%2C score 111.00%2C E-value 1.2e-30;gbkey=misc_feature;gene=SC2G5.06
NC_003888.3	RefSeq	gene	6791786	6792481	.	+	.	ID=gene6248;Dbxref=GeneID:1101627;Name=SC2G5.07;gbkey=Gene;gene=SC2G5.07;gene_biotype=protein_coding;gene_synonym=SC2G5.07;locus_tag=SCO6186
NC_003888.3	RefSeq	CDS	6791786	6792481	.	+	0	ID=cds6128;Parent=gene6248;Dbxref=Genbank:NP_630289.1,GeneID:1101627;Name=NP_630289.1;Note=SC2G5.07%2C probable phosphoheptose isomerase%2C len: 229aa%3B similar to TR:O25528 (EMBL:AE000596) phosphoheptose isomerase from Helicobacter pylori (192 aa) fasta scores%3B opt: 431%2C z-score: 495.6%2C E(): 2.6e-20%2C (46.9%25 identity in 147 aa overlap) and SW:LPCA_ECOLI phosphoheptose isomerase from Escherichia coli (192 aa) fasta scores%3B opt: 408%2C z-score: 469.8%2C E(): 7e-19%2C (41.6%25 identity in 161 aa overlap). Contains Pfam match to entry PF01380 SIS (Sugar ISomerase)%2C SIS domain%2C score 52.70%2C E-value 7.9e-12.;gbkey=CDS;gene=SC2G5.07;product=phosphoheptose isomerase;protein_id=NP_630289.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6791891	6792355	.	+	.	ID=id8103;Dbxref=GeneID:1101627;Note=Pfam match to entry PF01380 SIS (Sugar ISomerase)%2CSIS domain%2C score 52.70%2C E-value 7.9e-12;gbkey=misc_feature;gene=SC2G5.07
NC_003888.3	RefSeq	gene	6792478	6793869	.	+	.	ID=gene6249;Dbxref=GeneID:1101628;Name=SC2G5.08;gbkey=Gene;gene=SC2G5.08;gene_biotype=protein_coding;gene_synonym=SC2G5.08;locus_tag=SCO6187
NC_003888.3	RefSeq	CDS	6792478	6793869	.	+	0	ID=cds6129;Parent=gene6249;Dbxref=Genbank:NP_630290.1,GeneID:1101628;Name=NP_630290.1;Note=SC2G5.08%2C possible bifunctional synthase/transferase%2C len: 495aa%3B N-terminal region similar to many eg. TR:Q48046 (EMBL:U17642) ADP-heptose synthase from Haemophilus influenzae (342 aa) fasta scores%3B opt: 301%2C z-score: 304.7%2CE() : 1.1e-09%2C (29.3%25 identity in 311 aa overlap). C-terminal region simlar to TR:O28854 (EMBL:AE001006) glycerol-3-phosphate cytidyl transferase from Archaeoglobus fulgidus (137 aa) fasta scores%3B opt: 220%2C z-score: 230.3%2CE(): 1.5e-05%2C (42.2 %25 identity in 90 aa overlap).;gbkey=CDS;gene=SC2G5.08;product=bifunctional synthase/transferase;protein_id=NP_630290.1;transl_table=11
NC_003888.3	RefSeq	gene	6793866	6795566	.	+	.	ID=gene6250;Dbxref=GeneID:1101629;Name=SC2G5.09;gbkey=Gene;gene=SC2G5.09;gene_biotype=protein_coding;gene_synonym=SC2G5.09;locus_tag=SCO6188
NC_003888.3	RefSeq	CDS	6793866	6795566	.	+	0	ID=cds6130;Parent=gene6250;Dbxref=Genbank:NP_630291.1,GeneID:1101629;Name=NP_630291.1;Note=SC2G5.09%2C possible transferase%2C len: 566aa%3B C-terminal region similar to SW:RFAC_SALTY lipopolysaccharide heptosyltransferase-1 (317aa) blast scores%3B Sum P(2)%3D 1.3e-09%2C Identities%3D 46 /150 (30%25)%2C Positives %3D 70 /150 (46%25).;gbkey=CDS;gene=SC2G5.09;product=transferase;protein_id=NP_630291.1;transl_table=11
NC_003888.3	RefSeq	gene	6795563	6796516	.	+	.	ID=gene6251;Dbxref=GeneID:1101630;Name=SC2G5.10;gbkey=Gene;gene=SC2G5.10;gene_biotype=protein_coding;gene_synonym=SC2G5.10;locus_tag=SCO6189
NC_003888.3	RefSeq	CDS	6795563	6796516	.	+	0	ID=cds6131;Parent=gene6251;Dbxref=Genbank:NP_630292.1,GeneID:1101630;Name=NP_630292.1;Note=SC2G5.10%2C possible transferase%2C len: 317aa%3B similar to many eg. SW:EXOU_RHIME succinoglycan biosynthesis protein%2C ExoU from Rhizobium meliloti (342 aa) fasta scores%3B opt:203%2C z-score: 234.7%2C E(): 8.7e-06%2C (30.3%25 identity in 274aa overlap). Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferases%2C score 37.70%2C E-value 2.6e-07. NB this CDS is an imperfect duplicate of the neighbouring downstream CDS SC2G5.11 fasta scores%3B opt: 772%2C z-score: 700.7%2C E():3.3e-34%2C (47.5%25 identity in 280 aa overlap).;gbkey=CDS;gene=SC2G5.10;product=transferase;protein_id=NP_630292.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6795641	6796114	.	+	.	ID=id8104;Dbxref=GeneID:1101630;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyltransferases%2C score 37.70%2C E-value 2.6e-07;gbkey=misc_feature;gene=SC2G5.10
NC_003888.3	RefSeq	gene	6796513	6797409	.	+	.	ID=gene6252;Dbxref=GeneID:1101631;Name=SC2G5.11;gbkey=Gene;gene=SC2G5.11;gene_biotype=protein_coding;gene_synonym=SC2G5.11;locus_tag=SCO6190
NC_003888.3	RefSeq	CDS	6796513	6797409	.	+	0	ID=cds6132;Parent=gene6252;Dbxref=Genbank:NP_630293.1,GeneID:1101631;Name=NP_630293.1;Note=SC2G5.11%2C possible transferase%2C len: 298aa%3B similar to many eg. TR:P74820 (EMBL:U51197) glycosyl transferase from Sphingomonas S88 (288 aa) fasta scores%3B opt: 167%2C z-score: 204.0%2C E(): 0.00045%2C (27.5%25 identity in 262 aa overlap). Contains Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferases%2C score 51.10%2C E-value 2.4e-11. NB this CDS is an imperfect duplicate of the neighbouring upstream CDS SC2G5.10 fasta scores%3B opt: 772%2C z-score: 804.0%2C E(): 0%2C (47.5%25 identity in 280 aa overlap).;gbkey=CDS;gene=SC2G5.11;product=transferase;protein_id=NP_630293.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6796531	6797001	.	+	.	ID=id8105;Dbxref=GeneID:1101631;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyltransferases%2C score 51.10%2C E-value 2.4e-11;gbkey=misc_feature;gene=SC2G5.11
NC_003888.3	RefSeq	gene	6797459	6798373	.	-	.	ID=gene6253;Dbxref=GeneID:1101632;Name=SC2G5.12c;gbkey=Gene;gene=SC2G5.12c;gene_biotype=protein_coding;gene_synonym=SC2G5.12c;locus_tag=SCO6191
NC_003888.3	RefSeq	CDS	6797459	6798373	.	-	0	ID=cds6133;Parent=gene6253;Dbxref=Genbank:NP_630294.1,GeneID:1101632;Name=NP_630294.1;Note=SC2G5.12c%2C unknown%2C len: 304aa;gbkey=CDS;gene=SC2G5.12c;product=hypothetical protein;protein_id=NP_630294.1;transl_table=11
NC_003888.3	RefSeq	gene	6798812	6799918	.	+	.	ID=gene6254;Dbxref=GeneID:1101633;Name=SC2G5.13;gbkey=Gene;gene=SC2G5.13;gene_biotype=protein_coding;gene_synonym=SC2G5.13;locus_tag=SCO6192
NC_003888.3	RefSeq	CDS	6798812	6799918	.	+	0	ID=cds6134;Parent=gene6254;Dbxref=Genbank:NP_630295.1,GeneID:1101633;Name=NP_630295.1;Note=SC2G5.13%2C hypothetical protein%2C len: 304 aa%3B similar to TR:Q9KZ00 (EMBL:AL355753) Streptomyces coelicolor hypothetical protein SC8G12.05%2C 366 aa%3B fasta scores: opt: 688 Z-score: 744.6 E(): 7.7e-34%3B 44.110%25 identity in 365 aa overlap;gbkey=CDS;gene=SC2G5.13;product=hypothetical protein;protein_id=NP_630295.1;transl_table=11
NC_003888.3	RefSeq	gene	6800241	6803072	.	-	.	ID=gene6255;Dbxref=GeneID:1101634;Name=SC2G5.14c;gbkey=Gene;gene=SC2G5.14c;gene_biotype=protein_coding;gene_synonym=SC2G5.14c;locus_tag=SCO6193
NC_003888.3	RefSeq	CDS	6800241	6803072	.	-	0	ID=cds6135;Parent=gene6255;Dbxref=Genbank:NP_630296.1,GeneID:1101634;Name=NP_630296.1;Note=SC2G5.14c%2C possible transcriptional regulator%2C len: 943 aa%3B similar to TR:O05478 (EMBL:M86351) LipA transcriptional activator from Streptomyces sp. M11 (934aa) fasta scores%3B opt: 387%2C z-score: 377.7%2C E(): 9.5e-14%2C(31.1%25 identity in 875 aa overlap). Contains PS00622 Bacterial regulatory proteins%2C luxR family signature and PS00017 ATP /GTP-binding site motif A (P-loop). Also contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score53.30%2C E-value 5.3e-12.;gbkey=CDS;gene=SC2G5.14c;product=transcriptional regulator;protein_id=NP_630296.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6800301	6800384	.	-	.	ID=id8106;Dbxref=GeneID:1101634;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=SC2G5.14c
NC_003888.3	RefSeq	sequence_feature	6802881	6803072	.	-	.	ID=id8107;Dbxref=GeneID:1101634;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 53.30%2C E-value 5.3e-12;gbkey=misc_feature;gene=SC2G5.14c
NC_003888.3	RefSeq	sequence_feature	6802932	6802955	.	-	.	ID=id8108;Dbxref=GeneID:1101634;Note=PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC2G5.14c
NC_003888.3	RefSeq	gene	6803232	6804071	.	-	.	ID=gene6256;Dbxref=GeneID:1101635;Name=SC2G5.15c;gbkey=Gene;gene=SC2G5.15c;gene_biotype=protein_coding;gene_synonym=SC2G5.15c;locus_tag=SCO6194
NC_003888.3	RefSeq	CDS	6803232	6804071	.	-	0	ID=cds6136;Parent=gene6256;Dbxref=Genbank:NP_630297.1,GeneID:1101635;Name=NP_630297.1;Note=SC2G5.15c%2C possible response regulator%2C len:279aa%3B similar to many eg. TR:P72471 (EMBL:U63847) response regulator homolog from Streptomyces lividans (225aa) fasta scores%3B opt: 184%2C z-score: 203.6%2C E():0.00047%2C (32.7%25 identity in 208 aa overlap). Also C-terminal region similar to TR:P72402 (EMBL:Y07902) transcriptional regulator%2C RedZ (217 aa) fasta scores%3B opt:179%2C z-score:198.6%2C E():0.00089%2C (47.6 %25 identity in 63 aa overlap). Contains Pfam match to en try PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 58.30%2C E-value 1.7e-13. Contains possible helix-turn-helix at 234-255aa Score 1690 (+4.94 SD).;gbkey=CDS;gene=SC2G5.15c;product=response regulator;protein_id=NP_630297.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6803877	6804071	.	-	.	ID=id8109;Dbxref=GeneID:1101635;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 58.30%2C E-value1.7e-13;gbkey=misc_feature;gene=SC2G5.15c
NC_003888.3	RefSeq	gene	6804196	6805872	.	+	.	ID=gene6257;Dbxref=GeneID:1101636;Name=SC2G5.16;gbkey=Gene;gene=SC2G5.16;gene_biotype=protein_coding;gene_synonym=SC2G5.16;locus_tag=SCO6195
NC_003888.3	RefSeq	CDS	6804196	6805872	.	+	0	ID=cds6137;Parent=gene6257;Dbxref=Genbank:NP_630298.1,GeneID:1101636;Name=NP_630298.1;Note=SC2G5.16%2C probable acetyl-coenzyme A synthetase%2C len:558 aa%3B similar to many e.g. SW:ACSA_BACSU from Bacillus subtilis (572 aa) fasta scores%3B opt: 798%2C z-score: 878.3%2CE():0%2C (31.8%25 identity in 537 aa overlap). Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 116.90%2C E-value 3.8e-31. Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 116.90%2C E-value 3.8e-31;gbkey=CDS;gene=SC2G5.16;product=acetyl-coenzyme A synthetase;protein_id=NP_630298.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6804400	6805614	.	+	.	ID=id8110;Dbxref=GeneID:1101636;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 116.90%2C E-value 3.8e-31;gbkey=misc_feature;gene=SC2G5.16
NC_003888.3	RefSeq	gene	6805869	6807494	.	+	.	ID=gene6258;Dbxref=GeneID:1101637;Name=SC2G5.17;gbkey=Gene;gene=SC2G5.17;gene_biotype=protein_coding;gene_synonym=SC2G5.17;locus_tag=SCO6196
NC_003888.3	RefSeq	CDS	6805869	6807494	.	+	0	ID=cds6138;Parent=gene6258;Dbxref=Genbank:NP_630299.1,GeneID:1101637;Name=NP_630299.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;gene=SC2G5.17;product=AMP-binding domain-containing protein;protein_id=NP_630299.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6806019	6807269	.	+	.	ID=id8111;Dbxref=GeneID:1101637;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 148.80%2C E-value 9.6e-41;gbkey=misc_feature;gene=SC2G5.17
NC_003888.3	RefSeq	sequence_feature	6806439	6806474	.	+	.	ID=id8112;Dbxref=GeneID:1101637;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=SC2G5.17
NC_003888.3	RefSeq	gene	6807680	6808222	.	-	.	ID=gene6259;Dbxref=GeneID:1101638;Name=SC2G5.18c;gbkey=Gene;gene=SC2G5.18c;gene_biotype=protein_coding;gene_synonym=SC2G5.18c;locus_tag=SCO6197
NC_003888.3	RefSeq	CDS	6807680	6808222	.	-	0	ID=cds6139;Parent=gene6259;Dbxref=Genbank:NP_630300.1,GeneID:1101638;Name=NP_630300.1;Note=SC2G5.18c%2C possible hypothetical protein%2C len: 180 aa%3B similar to TR:O87846 (EMBL:AL031013) hypothetical protein from Streptomyces coelicolor (168 aa) fasta scores%3B opt:476%2C z-score: 556.4%2C E(): 1e-23%2C (45.3%25 identity in 170 aa overlap). Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC2G5.18c;product=hypothetical protein;protein_id=NP_630300.1;transl_table=11
NC_003888.3	RefSeq	gene	6808799	6812269	.	+	.	ID=gene6260;Dbxref=GeneID:1101639;Name=SC2G5.19;gbkey=Gene;gene=SC2G5.19;gene_biotype=protein_coding;gene_synonym=SC2G5.19;locus_tag=SCO6198
NC_003888.3	RefSeq	CDS	6808799	6812269	.	+	0	ID=cds6140;Parent=gene6260;Dbxref=Genbank:NP_630301.1,GeneID:1101639;Name=NP_630301.1;Note=SC2G5.19%2C possible hypothetical protein%2C len: 1156aa%3B alanine rich%2C similar to TR:O87848 (EMBL:AL031013) hypothetical protein from Streptomyces coelicolor (1147 aa) fasta scores%3B opt: 2516%2C z-score: 2119.1%2C E(): 0%2C (44.6%25 identity in 1122 aa overlap). Contains possible N-terminal signal sequence.;gbkey=CDS;gene=SC2G5.19;product=hypothetical protein;protein_id=NP_630301.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6812308	6812347	.	+	.	ID=id8113;Note=perfect inverted repeat with 4 base loop;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6812417	6814648	.	+	.	ID=gene6261;Dbxref=GeneID:1101640;Name=SC2G5.20;gbkey=Gene;gene=SC2G5.20;gene_biotype=protein_coding;gene_synonym=SC2G5.20;locus_tag=SCO6199
NC_003888.3	RefSeq	CDS	6812417	6814648	.	+	0	ID=cds6141;Parent=gene6261;Dbxref=Genbank:NP_630302.1,GeneID:1101640;Name=NP_630302.1;Note=SC2G5.20%2C possible  esterase%2C len: 743aa%3B similar to TR:Q54345 (EMBL:Z50108) esterase%2C FusH (509 aa) from Streptomyces lividans fasta scores%3B opt: 619%2C z-score: 601.5%2C E(): 3.2e-26%2C(40.9%25 identity in 389 aa overlap). Note that the CDS contains Pfam match to entry PF00089 trypsin%2CTrypsin%2C score 1.40%2C E-value 5.6e-05. Also contains possible N-terminal signal sequence.;gbkey=CDS;gene=SC2G5.20;product=esterase;protein_id=NP_630302.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6812546	6813181	.	+	.	ID=id8114;Dbxref=GeneID:1101640;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score1.40%2C E-value 5.6e-05;gbkey=misc_feature;gene=SC2G5.20
NC_003888.3	RefSeq	gene	6814657	6815349	.	-	.	ID=gene6262;Dbxref=GeneID:1101641;Name=SC2G5.21c;gbkey=Gene;gene=SC2G5.21c;gene_biotype=protein_coding;gene_synonym=SC2G5.21c;locus_tag=SCO6200
NC_003888.3	RefSeq	CDS	6814657	6815349	.	-	0	ID=cds6142;Parent=gene6262;Dbxref=Genbank:NP_630303.1,GeneID:1101641;Name=NP_630303.1;Note=SC2G5.21c%2C unknown%2C len: 230aa;gbkey=CDS;gene=SC2G5.21c;product=hypothetical protein;protein_id=NP_630303.1;transl_table=11
NC_003888.3	RefSeq	gene	6815497	6817281	.	+	.	ID=gene6263;Dbxref=GeneID:1101642;Name=SC2G5.22;gbkey=Gene;gene=SC2G5.22;gene_biotype=protein_coding;gene_synonym=SC2G5.22;locus_tag=SCO6201
NC_003888.3	RefSeq	CDS	6815497	6817281	.	+	0	ID=cds6143;Parent=gene6263;Dbxref=Genbank:NP_630304.1,GeneID:1101642;Name=NP_630304.1;Note=catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate;gbkey=CDS;gene=SC2G5.22;product=glyoxylate carboligase;protein_id=NP_630304.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6815536	6817155	.	+	.	ID=id8115;Dbxref=GeneID:1101642;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiaminepyrophosphate enzymes%2C score 427.80%2C E-value 4.7e-132;gbkey=misc_feature;gene=SC2G5.22
NC_003888.3	RefSeq	gene	6817450	6818094	.	-	.	ID=gene6264;Dbxref=GeneID:1101643;Name=SC2G5.23c;gbkey=Gene;gene=SC2G5.23c;gene_biotype=protein_coding;gene_synonym=SC2G5.23c;locus_tag=SCO6202
NC_003888.3	RefSeq	CDS	6817450	6818094	.	-	0	ID=cds6144;Parent=gene6264;Dbxref=Genbank:NP_630305.1,GeneID:1101643;Name=NP_630305.1;Note=SC2G5.23c%2C unknown%2C len: 214aa;gbkey=CDS;gene=SC2G5.23c;product=hypothetical protein;protein_id=NP_630305.1;transl_table=11
NC_003888.3	RefSeq	gene	6818162	6818500	.	-	.	ID=gene6265;Dbxref=GeneID:1101644;Name=SC2G5.24c;gbkey=Gene;gene=SC2G5.24c;gene_biotype=protein_coding;gene_synonym=SC2G5.24c;locus_tag=SCO6203
NC_003888.3	RefSeq	CDS	6818162	6818500	.	-	0	ID=cds6145;Parent=gene6265;Dbxref=Genbank:NP_630306.1,GeneID:1101644;Name=NP_630306.1;Note=SC2G5.24c%2C unknown%2C len: 112aa;gbkey=CDS;gene=SC2G5.24c;product=hypothetical protein;protein_id=NP_630306.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6818468	6818515	.	+	.	ID=id8116;Note=perfect inverted repeat with 6 base loop;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6818863	6820326	.	-	.	ID=gene6266;Dbxref=GeneID:1101645;Name=SC2G5.25c;gbkey=Gene;gene=SC2G5.25c;gene_biotype=protein_coding;gene_synonym=SC2G5.25c;locus_tag=SCO6204
NC_003888.3	RefSeq	CDS	6818863	6820326	.	-	0	ID=cds6146;Parent=gene6266;Dbxref=Genbank:NP_630307.1,GeneID:1101645;Name=NP_630307.1;Note=SC2G5.25c%2C probable catalase%2C len: 487 aa%3B similar to many%2C most similar to SW:BCA_STRVL bromoperoxidase-catalase from Streptomyces violaceus (483 aa) fasta scores%3B opt: 2334%2Cz-score: 2595.9%2C E(): 0%2C (69.4%25 identity in 487 aaoverlap).Contains PS00437 and PS00438 Catalase proximal heme-ligand signatures. Also contains Pfam match to entry PF00199 catalase%2C Catalase%2C score 1008.70%2C E-value 1.3e-299.;gbkey=CDS;gene=SC2G5.25c;product=catalase;protein_id=NP_630307.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6818881	6820308	.	-	.	ID=id8117;Dbxref=GeneID:1101645;Note=Pfam match to entry PF00199 catalase%2C Catalase%2C score 1008.70%2C E-value 1.3e-299;gbkey=misc_feature;gene=SC2G5.25c
NC_003888.3	RefSeq	sequence_feature	6819304	6819330	.	-	.	ID=id8118;Dbxref=GeneID:1101645;Note=PS00437 Catalase proximal heme-ligand signature.;gbkey=misc_feature;gene=SC2G5.25c
NC_003888.3	RefSeq	sequence_feature	6820150	6820200	.	-	.	ID=id8119;Dbxref=GeneID:1101645;Note=PS00438 Catalase proximal active site signature.;gbkey=misc_feature;gene=SC2G5.25c
NC_003888.3	RefSeq	gene	6820531	6821421	.	-	.	ID=gene6267;Dbxref=GeneID:1101646;Name=SC2G5.26c;gbkey=Gene;gene=SC2G5.26c;gene_biotype=protein_coding;gene_synonym=SC2G5.26c;locus_tag=SCO6205
NC_003888.3	RefSeq	CDS	6820531	6821421	.	-	0	ID=cds6147;Parent=gene6267;Dbxref=Genbank:NP_630308.1,GeneID:1101646;Name=NP_630308.1;Note=SC2G5.26c%2C probable dehydrogenase%2C len: 296aa%3B similar to many eg. TR:D1035162 (EMBL:AB015439) D-threonine dehydrogenase (292 aa) fasta scores%3B opt: 628%2C z-score:702.7%2C E(): 7.4e-32%2C (37.6%25 identity in 290 aa overlap).;gbkey=CDS;gene=SC2G5.26c;product=2-hydroxy-3-oxopropionate reductase;protein_id=NP_630308.1;transl_table=11
NC_003888.3	RefSeq	gene	6821469	6822308	.	-	.	ID=gene6268;Dbxref=GeneID:1101647;Name=SC2G5.27c;gbkey=Gene;gene=SC2G5.27c;gene_biotype=protein_coding;gene_synonym=SC2G5.27c;locus_tag=SCO6206
NC_003888.3	RefSeq	CDS	6821469	6822308	.	-	0	ID=cds6148;Parent=gene6268;Dbxref=Genbank:NP_630309.1,GeneID:1101647;Name=NP_630309.1;Note=SC2G5.27c%2C possible oxidoreductase%2C len: 279 aa%3B similar to many%2C mostly hypotheticals including TR:O50580 (EMBL :AB000361) D-tagatose 3-epimerase from Pseudomonas cichorii (290 aa) fasta scores%3B opt: 164%2C z-score:193.0%2CE(): 0.0018 %2C(26.8%25 identity in 142 aa overlap). Most similar to SW:GIP_ECOLI glyoxylate-induced protein from Escherichia coli (258 aa) fasta scores%3B opt: 411%2C z-score:473.6%2C E(): 4.3e-19%2C (35.0%25 identity in 266 aa overlap). As with the Escherichia coli homologue%2C this CDS is located close to the CDS for gcl (SC2G5.22).;gbkey=CDS;gene=SC2G5.27c;product=oxidoreductase;protein_id=NP_630309.1;transl_table=11
NC_003888.3	RefSeq	gene	6822463	6822717	.	+	.	ID=gene6269;Dbxref=GeneID:1101648;Name=SC2G5.28;gbkey=Gene;gene=SC2G5.28;gene_biotype=protein_coding;gene_synonym=SC2G5.28;locus_tag=SCO6207
NC_003888.3	RefSeq	CDS	6822463	6822717	.	+	0	ID=cds6149;Parent=gene6269;Dbxref=Genbank:NP_630310.1,GeneID:1101648;Name=NP_630310.1;Note=SC2G5.28%2C unknown%2C len: 84aa;gbkey=CDS;gene=SC2G5.28;product=hypothetical protein;protein_id=NP_630310.1;transl_table=11
NC_003888.3	RefSeq	gene	6822714	6823082	.	+	.	ID=gene6270;Dbxref=GeneID:1101649;Name=SC2G5.29;gbkey=Gene;gene=SC2G5.29;gene_biotype=protein_coding;gene_synonym=SC2G5.29;locus_tag=SCO6208
NC_003888.3	RefSeq	CDS	6822714	6823082	.	+	0	ID=cds6150;Parent=gene6270;Dbxref=Genbank:NP_630311.1,GeneID:1101649;Name=NP_630311.1;Note=SC2G5.29%2C possible DNA-binding protein%2C len: 122 aa%2C contains probable helix-turn-helix at 97-118aa Score 1428(+4.05 SD).;gbkey=CDS;gene=SC2G5.29;product=DNA-binding protein;protein_id=NP_630311.1;transl_table=11
NC_003888.3	RefSeq	gene	6823172	6823747	.	+	.	ID=gene6271;Dbxref=GeneID:1101650;Name=SC2G5.30;gbkey=Gene;gene=SC2G5.30;gene_biotype=protein_coding;gene_synonym=SC2G5.30;locus_tag=SCO6209
NC_003888.3	RefSeq	CDS	6823172	6823747	.	+	0	ID=cds6151;Parent=gene6271;Dbxref=Genbank:NP_630312.1,GeneID:1101650;Name=NP_630312.1;Note=SC2G5.30%2C unknown%2C len: 191 aa%3B limited similarity to TR:O32141 (EMBL:Z99120) hypothetical protein from Bacillus subtilis (494 aa) fasta scores%3B opt: 204%2C z-score: 241.2%2CE(): 3.8e-06%2C (27.8%25 identity in 162 aa overlap).;gbkey=CDS;gene=SC2G5.30;product=OHCU decarboxylase;protein_id=NP_630312.1;transl_table=11
NC_003888.3	RefSeq	gene	6823744	6824145	.	+	.	ID=gene6272;Dbxref=GeneID:1101651;Name=SC2G5.31;gbkey=Gene;gene=SC2G5.31;gene_biotype=protein_coding;gene_synonym=SC2G5.31;locus_tag=SCO6210
NC_003888.3	RefSeq	CDS	6823744	6824145	.	+	0	ID=cds6152;Parent=gene6272;Dbxref=Genbank:NP_630313.1,GeneID:1101651;Name=NP_630313.1;Note=SC2G5.31%2C unknown%2C len: 133 aa%3B probably member of a family of transthyretin-like proteins%2C similar to many eg. SW:YEDX_ECOLI hypothetical transthyretin-like protein fromEscherichia coli (137 aa) fasta scores%3B opt: 149%2C z-score:198.9%2C E(): 0.00086%2C (40.9%25 identity in 127 aa overlap).;gbkey=CDS;gene=SC2G5.31;product=hypothetical protein;protein_id=NP_630313.1;transl_table=11
NC_003888.3	RefSeq	gene	6824153	6825088	.	+	.	ID=gene6273;Dbxref=GeneID:1101652;Name=SC2G5.32;gbkey=Gene;gene=SC2G5.32;gene_biotype=protein_coding;gene_synonym=SC2G5.32,SC9G1.01;locus_tag=SCO6211
NC_003888.3	RefSeq	CDS	6824153	6825088	.	+	0	ID=cds6153;Parent=gene6273;Dbxref=Genbank:NP_733692.1,GeneID:1101652;Name=NP_733692.1;Note=SC9G1.01%2C possible uricase (partial CDS)%2C len: >204 aa%3B similar to SW:URIC_ASPFL (EMBL:X61766) Aspergillus flavus uricase (EC 1.7.3.3) (urate oxidase)%2C Uaz or Uox%2C 301 aa%3B fasta scores: opt: 49 z-score: 553.3 E(): 1.9e-23%3B 41.2%25 identity in 177 aa overlap. Contains Pfam match to entry PF01014 Uricase%2C Uricase~SC2G5.32%2C partial CDS%2C possible oxidoreductase%2C len: 141 aa%3B similar to the N-terminal region of many urate oxidases%2C a eukaryotic peroxisomal enzyme%2C e.g. SW:URIC_PAPHA urate oxidases from Papio hamadryas (Hamadryas baboon) (303 aa) fasta scores%3B opt: 282%2Cz-score: 368.8%2C E(): 3e-13%2C (36.6%25 identity in 131 aaoverlap).;gbkey=CDS;gene=SC2G5.32;product=uricase;protein_id=NP_733692.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6824474	6825055	.	+	.	ID=id8120;Dbxref=GeneID:1101652;Note=Pfam match to entry PF01014 Uricase%2C Uricase%2C score 33.20%2C E-value 1.9e-11;gbkey=misc_feature;gene=SC2G5.32
NC_003888.3	RefSeq	ribosome_entry_site	6825141	6825145	.	+	.	ID=id8121;gbkey=RBS
NC_003888.3	RefSeq	gene	6825153	6826568	.	+	.	ID=gene6274;Dbxref=GeneID:1101653;Name=SC9G1.02;gbkey=Gene;gene=SC9G1.02;gene_biotype=protein_coding;gene_synonym=SC9G1.02;locus_tag=SCO6212
NC_003888.3	RefSeq	CDS	6825153	6826568	.	+	0	ID=cds6154;Parent=gene6274;Dbxref=Genbank:NP_630314.1,GeneID:1101653;Name=NP_630314.1;Note=SC9G1.02%2C possible permease%2C len: 471 aa%3B similar to SW:PBUX_BACSU (EMBL:X83878) Bacillus subtilis xanthine permease PubX%2C 438 aa%3B fasta scores: opt: 1060 z-score: 1156.8 E(): 0%3B 39.2%25 identity in 413 aa overlap to SW:URAA_ECOLI (EMBL:X73586) Escherichia coli uracil permease (uracil transporter) UraA%2C 429 aa%3B fasta scores: opt: 505 z-score: 554.2 E(): 1.7e-23%3B 28.9%25 identity in 422 aa overlap and to Streptomyces coelicolor St9G1.04%2C 462 aa%3B fasta scores: opt: 1668 z-score: 1511.0 E(): 0%3B 57.0%25 identity in 435 aa overlap. Contains match to Pfam entry Pfam match to entry PF00860 xan_ur_permease%2C Xanthine/uracil permeases family and match to Prosite entry PS01116 Xanthine/uracil permeases family signature;gbkey=CDS;gene=SC9G1.02;product=permease;protein_id=NP_630314.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6825264	6826424	.	+	.	ID=id8122;Dbxref=GeneID:1101653;Note=Pfam match to entry PF00860 xan_ur_permease%2C Xanthine/uracil permeases family%2C score 332.10%2C E-value 6.1e-96;gbkey=misc_feature;gene=SC9G1.02
NC_003888.3	RefSeq	sequence_feature	6826260	6826322	.	+	.	ID=id8123;Dbxref=GeneID:1101653;Note=PS01116 Xanthine/uracil permeases family signature;gbkey=misc_feature;gene=SC9G1.02
NC_003888.3	RefSeq	gene	6826642	6828039	.	+	.	ID=gene6275;Dbxref=GeneID:1101654;Name=SC9G1.03;gbkey=Gene;gene=SC9G1.03;gene_biotype=protein_coding;gene_synonym=SC9G1.03;locus_tag=SCO6213
NC_003888.3	RefSeq	CDS	6826642	6828039	.	+	0	ID=cds6155;Parent=gene6275;Dbxref=Genbank:NP_630315.1,GeneID:1101654;Name=NP_630315.1;Note=catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.;gbkey=CDS;gene=SC9G1.03;product=8-oxoguanine deaminase;protein_id=NP_630315.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6827008	6827931	.	+	.	ID=id8124;Dbxref=GeneID:1101654;Note=Pfam match to entry PF01685 ATZ_TRZ%2C %2C score 272.80%2C E-value 4.6e-78;gbkey=misc_feature;gene=SC9G1.03
NC_003888.3	RefSeq	ribosome_entry_site	6828281	6828285	.	+	.	ID=id8125;gbkey=RBS
NC_003888.3	RefSeq	gene	6828295	6829683	.	+	.	ID=gene6276;Dbxref=GeneID:1101655;Name=SC9G1.04;gbkey=Gene;gene=SC9G1.04;gene_biotype=protein_coding;gene_synonym=SC9G1.04;locus_tag=SCO6214
NC_003888.3	RefSeq	CDS	6828295	6829683	.	+	0	ID=cds6156;Parent=gene6276;Dbxref=Genbank:NP_630316.1,GeneID:1101655;Name=NP_630316.1;Note=SC9G1.04%2C probable permease%2C len: 462 aa%3B similar to SW:PBUX_BACSU (EMBL:X83878) Bacillus subtilis xanthine permease PubX%2C 438 aa%3B fasta scores: opt: 1088 z-score: 1244.0 E(): 0%3B 41.5%25 identity in 417 aa overlap and to Streptomyces coelicolor St9G1.02%2C 471 aa%3B fasta scores: opt: 1668 z-score: 1651.2 E(): 0%3B 57.0%25 identity in 435 aa overlap. Contains match to Pfam entry Pfam match to entry PF00860 xan_ur_permease%2C Xanthine/uracil permeases family and match to Prosite entry PS01116 Xanthine/uracil permeases family signature;gbkey=CDS;gene=SC9G1.04;product=permease;protein_id=NP_630316.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6828331	6829491	.	+	.	ID=id8126;Dbxref=GeneID:1101655;Note=Pfam match to entry PF00860 xan_ur_permease%2C Xanthine/uracil permeases family%2C score 359.70%2C E-value 3.1e-104;gbkey=misc_feature;gene=SC9G1.04
NC_003888.3	RefSeq	sequence_feature	6829327	6829389	.	+	.	ID=id8127;Dbxref=GeneID:1101655;Note=PS01116 Xanthine/uracil permeases family signature;gbkey=misc_feature;gene=SC9G1.04
NC_003888.3	RefSeq	stem_loop	6829690	6829815	.	+	.	ID=id8128;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6830017	6830142	.	+	.	ID=gene6277;Dbxref=GeneID:1101656;Name=SC9G1.05;gbkey=Gene;gene=SC9G1.05;gene_biotype=protein_coding;gene_synonym=SC9G1.05;locus_tag=SCO6215
NC_003888.3	RefSeq	CDS	6830017	6830142	.	+	0	ID=cds6157;Parent=gene6277;Dbxref=Genbank:NP_630317.1,GeneID:1101656;Name=NP_630317.1;Note=SC9G1.05%2C unknown%2C len: 41 aa;gbkey=CDS;gene=SC9G1.05;product=hypothetical protein;protein_id=NP_630317.1;transl_table=11
NC_003888.3	RefSeq	gene	6830158	6830580	.	-	.	ID=gene6278;Dbxref=GeneID:1101657;Name=SC9G1.06c;gbkey=Gene;gene=SC9G1.06c;gene_biotype=protein_coding;gene_synonym=SC9G1.06c;locus_tag=SCO6216
NC_003888.3	RefSeq	CDS	6830158	6830580	.	-	0	ID=cds6158;Parent=gene6278;Dbxref=Genbank:NP_630318.1,GeneID:1101657;Name=NP_630318.1;Note=SC9G1.06c%2C hypothetical protein%2C len: 140 aa%3B similar to SW:YBAW_ECOLI (EMBL%3BAE000150) Escherichia coli hypothetical 15.1 KD protein%2C 132 aa%3B fasta scores: opt: 165 z-score: 225.5 E(): 3.5e-05%3B 26.0%25 identity in 127 aa overlap;gbkey=CDS;gene=SC9G1.06c;product=hypothetical protein;protein_id=NP_630318.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6830589	6830592	.	-	.	ID=id8129;gbkey=RBS
NC_003888.3	RefSeq	gene	6830637	6831287	.	-	.	ID=gene6279;Dbxref=GeneID:1101658;Name=SC9G1.07c;gbkey=Gene;gene=SC9G1.07c;gene_biotype=protein_coding;gene_synonym=SC9G1.07c;locus_tag=SCO6217
NC_003888.3	RefSeq	CDS	6830637	6831287	.	-	0	ID=cds6159;Parent=gene6279;Dbxref=Genbank:NP_630319.1,GeneID:1101658;Name=NP_630319.1;Note=SC9G1.07c%2C unknown%2C len: 216 aa%3B similar to TR:CAB42748 (EMBL:AL049841) Streptomyces coelicolor hypothetical 40.6 KD protein SCE9.02c%2C 391 aa%3B fasta scores: opt: 158 z-score: 169.6 E(): 0.045%3B 28.8%25 identity in 198 aa overlap;gbkey=CDS;gene=SC9G1.07c;product=hypothetical protein;protein_id=NP_630319.1;transl_table=11
NC_003888.3	RefSeq	gene	6831346	6831945	.	-	.	ID=gene6280;Dbxref=GeneID:1101659;Name=SC9G1.08c;gbkey=Gene;gene=SC9G1.08c;gene_biotype=protein_coding;gene_synonym=SC9G1.08c;locus_tag=SCO6218
NC_003888.3	RefSeq	CDS	6831346	6831945	.	-	0	ID=cds6160;Parent=gene6280;Dbxref=Genbank:NP_630320.1,GeneID:1101659;Name=NP_630320.1;Note=SC9G1.08c%2C possible phosphatase%2C len: 199 aa%3B similar to SW:COBC_SALTY (EMBL:U12808) Salmonella typhimurium alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.-) CobC%2C 234 aa%3B fasta scores: opt: 239 z-score: 291.8 E(): 7e-09%3B 31.8%25 identity in 201 aa overlap. Contains match to Pfam entry PF00300 PGAM%2C Phosphoglycerate mutase family;gbkey=CDS;gene=SC9G1.08c;product=phosphatase;protein_id=NP_630320.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6831637	6831654	.	-	.	ID=id8130;Dbxref=GeneID:1101659;Note=PS00193 Cytochrome b/b6 Qo site signature;gbkey=misc_feature;gene=SC9G1.08c
NC_003888.3	RefSeq	sequence_feature	6831643	6831933	.	-	.	ID=id8131;Dbxref=GeneID:1101659;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 77.10%2C E-value 1.6e-19;gbkey=misc_feature;gene=SC9G1.08c
NC_003888.3	RefSeq	ribosome_entry_site	6831949	6831953	.	-	.	ID=id8132;gbkey=RBS
NC_003888.3	RefSeq	gene	6832135	6835920	.	+	.	ID=gene6281;Dbxref=GeneID:1101660;Name=SC2H4.01;gbkey=Gene;gene=SC2H4.01;gene_biotype=protein_coding;gene_synonym=SC2H4.01,SC9G1.09;locus_tag=SCO6219
NC_003888.3	RefSeq	CDS	6832135	6835920	.	+	0	ID=cds6161;Parent=gene6281;Dbxref=Genbank:NP_733693.1,GeneID:1101660;Name=NP_733693.1;Note=SC2H4.01%2C probable ATP/GTP binding protein%2C partial CDS%2C len: >606 aa%3B contains PS00017 ATP /GTP-binding site motif A (P-loop)~SC9G1.09%2C possible Ser/Thr protein kinase (partial CDS)%2C len: >688 aa%3B low similarity to TR:O54228 (EMBL:AJ223176) Streptomyces granaticolor ser/thr protein kinase (EC 2.7.1.37) (phosphorylase B kinase kinase) (glycogen synthase A kinase) (hydroxyalkyl-protein kinase) (serine(threonine) protein kinase)%2C Pkg4%2C 761 aa%3B fasta scores: opt: 142 z-score: 146.7 E(): 0.84%3B 25.6%25 identity in 406 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC2H4.01;product=Ser/Thr protein kinase;protein_id=NP_733693.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6834286	6834309	.	+	.	ID=id8133;Dbxref=GeneID:1101660;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC2H4.01
NC_003888.3	RefSeq	ribosome_entry_site	6836047	6836051	.	+	.	ID=id8134;Note=possible RBS upstream of SC2H4.02;gbkey=RBS
NC_003888.3	RefSeq	gene	6836057	6842608	.	+	.	ID=gene6282;Dbxref=GeneID:1101661;Name=SC2H4.02;gbkey=Gene;gene=SC2H4.02;gene_biotype=protein_coding;gene_synonym=SC2H4.02;locus_tag=SCO6220
NC_003888.3	RefSeq	CDS	6836057	6842608	.	+	0	ID=cds6162;Parent=gene6282;Dbxref=Genbank:NP_630321.1,GeneID:1101661;Name=NP_630321.1;Note=SC2H4.02%2C unknown%2C len: 2183%3B very limited similarity to proteins of the RHS family e.g. WAPA_BACSU wall-associated protein precursor (2334 aa)%2C fasta scores%3B opt: 141 z-score: 296.8 E(): 2.7e-09%2C 23.4%25 identity in 1237 aa overlap%2C and RHSA_ECOLI RHSA protein precursor (1377 aa)%2C fasta scores%3B opt: 135 z-score: 222.4 E(): 3.8e-05%2C 23.0%25 identity in 1016 aa overlap. Contains possible membrane anchor around aa 1900. Alternative start at aa 27 would give N-terminal signal sequence;gbkey=CDS;gene=SC2H4.02;product=hypothetical protein;protein_id=NP_630321.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6842634	6842669	.	+	.	ID=id8135;Note=hairpin loop with 17/17 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6842700	6843161	.	+	.	ID=gene6283;Dbxref=GeneID:1101662;Name=SC2H4.03;gbkey=Gene;gene=SC2H4.03;gene_biotype=protein_coding;gene_synonym=SC2H4.03;locus_tag=SCO6221
NC_003888.3	RefSeq	CDS	6842700	6843161	.	+	0	ID=cds6163;Parent=gene6283;Dbxref=Genbank:NP_630322.1,GeneID:1101662;Name=NP_630322.1;Note=SC2H4.03%2C possible lipoprotein%2C len: 153 aa%3B contains possible N-terminal signal sequence with appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC2H4.03;product=lipoprotein;protein_id=NP_630322.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6842745	6842777	.	+	.	ID=id8136;Dbxref=GeneID:1101662;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC2H4.03
NC_003888.3	RefSeq	gene	6843172	6844380	.	-	.	ID=gene6284;Dbxref=GeneID:1101663;Name=SC2H4.04c;gbkey=Gene;gene=SC2H4.04c;gene_biotype=protein_coding;gene_synonym=SC2H4.04c;locus_tag=SCO6222
NC_003888.3	RefSeq	CDS	6843172	6844380	.	-	0	ID=cds6164;Parent=gene6284;Dbxref=Genbank:NP_630323.1,GeneID:1101663;Name=NP_630323.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;gene=SC2H4.04c;product=aminotransferase AlaT;protein_id=NP_630323.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6843184	6844365	.	-	.	ID=id8137;Dbxref=GeneID:1101663;Note=Pfam match to entry PF00155 aminotran_1%2C Aminotransferases class-I%2C score 136.00%2C E-value 6.9e-37;gbkey=misc_feature;gene=SC2H4.04c
NC_003888.3	RefSeq	ribosome_entry_site	6844392	6844396	.	-	.	ID=id8138;Note=possible RBS upstream of SC2H4.04c;gbkey=RBS
NC_003888.3	RefSeq	gene	6844468	6845118	.	+	.	ID=gene6285;Dbxref=GeneID:1101664;Name=SC2H4.05;gbkey=Gene;gene=SC2H4.05;gene_biotype=protein_coding;gene_synonym=SC2H4.05;locus_tag=SCO6223
NC_003888.3	RefSeq	CDS	6844468	6845118	.	+	0	ID=cds6165;Parent=gene6285;Dbxref=Genbank:NP_630324.1,GeneID:1101664;Name=NP_630324.1;Note=SC2H4.05%2C unknown%2C len: 216 aa%3B similar to hypothetical proteins from many organisms e.g. TR:P71983 (EMBL:Z81360) Mycobacterium tuberculosis MTCY04C12.10C (236 aa)%2C fasta scores%3B opt: 276 z-score: 307.9 E(): 6.6e-10%2C 46.0%25 identity in 100 aa overlap;gbkey=CDS;gene=SC2H4.05;product=hypothetical protein;protein_id=NP_630324.1;transl_table=11
NC_003888.3	RefSeq	gene	6845172	6845987	.	-	.	ID=gene6286;Dbxref=GeneID:1101665;Name=SC2H4.06c;gbkey=Gene;gene=SC2H4.06c;gene_biotype=protein_coding;gene_synonym=SC2H4.06c;locus_tag=SCO6224
NC_003888.3	RefSeq	CDS	6845172	6845987	.	-	0	ID=cds6166;Parent=gene6286;Dbxref=Genbank:NP_630325.1,GeneID:1101665;Name=NP_630325.1;Note=SC2H4.06c%2C probable hypothetical protein%2C len: 271 aa%3B contains N-terminal signal sequence;gbkey=CDS;gene=SC2H4.06c;product=hypothetical protein;protein_id=NP_630325.1;transl_table=11
NC_003888.3	RefSeq	gene	6845987	6847252	.	-	.	ID=gene6287;Dbxref=GeneID:1101666;Name=SC2H4.07c;gbkey=Gene;gene=SC2H4.07c;gene_biotype=protein_coding;gene_synonym=SC2H4.07c;locus_tag=SCO6225
NC_003888.3	RefSeq	CDS	6845987	6847252	.	-	0	ID=cds6167;Parent=gene6287;Dbxref=Genbank:NP_630326.1,GeneID:1101666;Name=NP_630326.1;Note=SC2H4.07c%2C probable hypothetical protein%2C len: 421 aa%3B similar in C-terminus to B. subtilis TR:P70960 (EMBL:Z81356%3B) hypothetical protein ywmC precursor (227 aa)%2C fasta scores%3B opt: 319 z-score: 219.2 E(): 5.8e-05%2C 29.6%25 identity in 216 aa overlap;gbkey=CDS;gene=SC2H4.07c;product=hypothetical protein;protein_id=NP_630326.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6845996	6846000	.	-	.	ID=id8139;Dbxref=GeneID:1101666;Note=possible RBS upstream of SC2H4.06c;gbkey=RBS;gene=SC2H4.07c
NC_003888.3	RefSeq	ribosome_entry_site	6847260	6847263	.	-	.	ID=id8140;Note=possible RBS upstream of SC2H4.07c;gbkey=RBS
NC_003888.3	RefSeq	gene	6847315	6848841	.	-	.	ID=gene6288;Dbxref=GeneID:1101667;Name=SC2H4.08c;gbkey=Gene;gene=SC2H4.08c;gene_biotype=protein_coding;gene_synonym=SC2H4.08c;locus_tag=SCO6226
NC_003888.3	RefSeq	CDS	6847315	6848841	.	-	0	ID=cds6168;Parent=gene6288;Dbxref=Genbank:NP_630327.1,GeneID:1101667;Name=NP_630327.1;Note=SC2H4.08c%2C unknown%2C len: 508 aa%3B some similarity to Rhizobium sp. NGR234 plasmid pNGR234a hypothetical protein Y4XN_RHISN (628 aa)%2C fasta scores%3B opt: 116 z-score: 207.6 E(): 0.00026%2C 26.4%25 identity in 641 aa overlap. Also some similarity to divergent CDS SC2H4.09 (E(): 0.00044%2C 29.1%25 identity in 553 aa overlap);gbkey=CDS;gene=SC2H4.08c;product=hypothetical protein;protein_id=NP_630327.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6848849	6848853	.	-	.	ID=id8141;Note=possible RBS upstream of SC2H4.08c;gbkey=RBS
NC_003888.3	RefSeq	gene	6848969	6850522	.	+	.	ID=gene6289;Dbxref=GeneID:1101668;Name=SC2H4.09;gbkey=Gene;gene=SC2H4.09;gene_biotype=protein_coding;gene_synonym=SC2H4.09;locus_tag=SCO6227
NC_003888.3	RefSeq	CDS	6848969	6850522	.	+	0	ID=cds6169;Parent=gene6289;Dbxref=Genbank:NP_630328.1,GeneID:1101668;Name=NP_630328.1;Note=SC2H4.09%2C unknown%2C len: 517 aa%3B some similarity to Rhizobium sp. NGR234 plasmid pNGR234a hypothetical protein Y4XN_RHISN (628 aa)%2C fasta scores%3B opt: 148 z-score: 254.8 E(): 6e-07%2C 25.9%25 identity in 495 aa overlap. Also weak similarity to S. coelicolor SC4H2.21 (E(): 1.8e-06%2C 33.2%25 identity in 581 aa overlap) and to divergent CDS SC2H4.08c (E(): 0.0012%2C 29.1%25 identity in 553 aa overlap);gbkey=CDS;gene=SC2H4.09;product=hypothetical protein;protein_id=NP_630328.1;transl_table=11
NC_003888.3	RefSeq	gene	6850590	6851204	.	+	.	ID=gene6290;Dbxref=GeneID:1101669;Name=SC2H4.10;gbkey=Gene;gene=SC2H4.10;gene_biotype=protein_coding;gene_synonym=SC2H4.10;locus_tag=SCO6228
NC_003888.3	RefSeq	CDS	6850590	6851204	.	+	0	ID=cds6170;Parent=gene6290;Dbxref=Genbank:NP_630329.1,GeneID:1101669;Name=NP_630329.1;Note=SC2H4.10%2C unknown%2C len: 204 aa;gbkey=CDS;gene=SC2H4.10;product=hypothetical protein;protein_id=NP_630329.1;transl_table=11
NC_003888.3	RefSeq	gene	6851212	6852093	.	-	.	ID=gene6291;Dbxref=GeneID:1101670;Name=SC2H4.11c;gbkey=Gene;gene=SC2H4.11c;gene_biotype=protein_coding;gene_synonym=SC2H4.11c;locus_tag=SCO6229
NC_003888.3	RefSeq	CDS	6851212	6852093	.	-	0	ID=cds6171;Parent=gene6291;Dbxref=Genbank:NP_630330.1,GeneID:1101670;Name=NP_630330.1;Note=SC2H4.11c%2C probable sugar transport system permease%2C len: 293 aa%3B similar to many e.g. MALD_STRPN maltodextrin transport system permease (277 aa)%2C fasta scores%3B opt: 394 z-score: 585.4 E(): 2.3e-25%2C 29.1%25 identity in 268 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.30%2C E-value 1.6e-13;gbkey=CDS;gene=SC2H4.11c;product=sugar transport system permease;protein_id=NP_630330.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6851332	6851562	.	-	.	ID=id8142;Dbxref=GeneID:1101670;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.30%2C E-value 1.6e-13;gbkey=misc_feature;gene=SC2H4.11c
NC_003888.3	RefSeq	sequence_feature	6851473	6851559	.	-	.	ID=id8143;Dbxref=GeneID:1101670;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=misc_feature;gene=SC2H4.11c
NC_003888.3	RefSeq	gene	6852090	6853064	.	-	.	ID=gene6292;Dbxref=GeneID:1101671;Name=SC2H4.12c;gbkey=Gene;gene=SC2H4.12c;gene_biotype=protein_coding;gene_synonym=SC2H4.12c;locus_tag=SCO6230
NC_003888.3	RefSeq	CDS	6852090	6853064	.	-	0	ID=cds6172;Parent=gene6292;Dbxref=Genbank:NP_630331.1,GeneID:1101671;Name=NP_630331.1;Note=SC2H4.12c%2C probable sugar transport system permease%2C len: 324 aa%3B similar to many e.g. AMYD_THETU potential starch degradation products transport system permease (292 aa)%2C fasta scores%3B opt: 479 z-score: 571.8 E(): 1.3e-24%2C 28.8%25 identity in 281 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.80%2C E-value 1.2e-13;gbkey=CDS;gene=SC2H4.12c;product=sugar transport system permease;protein_id=NP_630331.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6852101	6852107	.	-	.	ID=id8144;Dbxref=GeneID:1101671;Note=posxsible RBS upstream of SC2H4.11c;gbkey=RBS;gene=SC2H4.12c
NC_003888.3	RefSeq	sequence_feature	6852213	6852434	.	-	.	ID=id8145;Dbxref=GeneID:1101671;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.80%2C E-value 1.2e-13;gbkey=misc_feature;gene=SC2H4.12c
NC_003888.3	RefSeq	gene	6853107	6854429	.	-	.	ID=gene6293;Dbxref=GeneID:1101672;Name=SC2H4.13c;gbkey=Gene;gene=SC2H4.13c;gene_biotype=protein_coding;gene_synonym=SC2H4.13c;locus_tag=SCO6231
NC_003888.3	RefSeq	CDS	6853107	6854429	.	-	0	ID=cds6173;Parent=gene6293;Dbxref=Genbank:NP_630332.1,GeneID:1101672;Name=NP_630332.1;Note=SC2H4.13c%2C probable sugar transport system sugar-binding lipoprotein%2C len: 440 aa%3B some similarity to several%2C e.g. TR:Q46443 (EMBL:M57692) Thermoanaerobacterium thermosulfurigenes maltose-binding protein precursor (446 aa)%2C fasta scores%3B opt: 239 z-score: 192.4 E(): 0.0018%2C 23.5%25 identity in 366 aa overlap. Contains N-terminal signal sequence with appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site sugar transport system sugar-binding lipoprotein;gbkey=CDS;gene=SC2H4.13c;product=sugar transport system sugar-binding lipoprotein;protein_id=NP_630332.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6854367	6854399	.	-	.	ID=id8146;Dbxref=GeneID:1101672;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC2H4.13c
NC_003888.3	RefSeq	ribosome_entry_site	6854438	6854443	.	-	.	ID=id8147;Note=possible RBS upstream of SC2H4.13c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6854689	6854694	.	+	.	ID=id8148;Note=possible RBS upstream of SC2H4.14;gbkey=RBS
NC_003888.3	RefSeq	gene	6854701	6857163	.	+	.	ID=gene6294;Dbxref=GeneID:1101673;Name=SC2H4.14;gbkey=Gene;gene=SC2H4.14;gene_biotype=protein_coding;gene_synonym=SC2H4.14;locus_tag=SCO6232
NC_003888.3	RefSeq	CDS	6854701	6857163	.	+	0	ID=cds6174;Parent=gene6294;Dbxref=Genbank:NP_630333.1,GeneID:1101673;Name=NP_630333.1;Note=SC2H4.14%2C probable beta-mannosidase%2C len: 820 aa%3B similar to several eukaryotic beta-mannosidases%2C e.g. MANB_HUMAN beta-mannosidase precursor (EC 3.2.1.25) (879 aa)%2C fasta scores%3B opt: 679 z-score: 909.3 E(): 0%2C 31.4%25 identity in 684 aa overlap;gbkey=CDS;gene=SC2H4.14;product=beta-mannosidase;protein_id=NP_630333.1;transl_table=11
NC_003888.3	RefSeq	gene	6857160	6858188	.	+	.	ID=gene6295;Dbxref=GeneID:1101674;Name=SC2H4.15;gbkey=Gene;gene=SC2H4.15;gene_biotype=protein_coding;gene_synonym=SC2H4.15;locus_tag=SCO6233
NC_003888.3	RefSeq	CDS	6857160	6858188	.	+	0	ID=cds6175;Parent=gene6295;Dbxref=Genbank:NP_630334.1,GeneID:1101674;Name=NP_630334.1;Note=SC2H4.15%2C probable transcriptional regulator%2C len: 342 aa%3B similar to many members of the lacI family e.g. CCPA_BACME glucose-resistance amylase regulator (Bacillus megaterium) (332 aa)%2C fasta scores%3B opt: 448 z-score: 548.6 E(): 2.6e-23%2C 29.8%25 identity in 336 aa overlap. Contains helix-turn-helix motif from aa 9-30 (Score 1778%2C +5.24 SD) and Pfam matches to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 30.40%2C E-value 4.7e-07 and to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family%2C score 44.00%2C E-value 3.4e-09;gbkey=CDS;gene=SC2H4.15;product=transcriptional regulator;protein_id=NP_630334.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6857175	6857258	.	+	.	ID=id8149;Dbxref=GeneID:1101674;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 30.40%2C E-value 4.7e-07;gbkey=misc_feature;gene=SC2H4.15
NC_003888.3	RefSeq	sequence_feature	6857349	6858077	.	+	.	ID=id8150;Dbxref=GeneID:1101674;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 44.00%2C E-value 3.4e-09;gbkey=misc_feature;gene=SC2H4.15
NC_003888.3	RefSeq	sequence_feature	6858227	6859957	.	+	.	ID=id8151;Note=92.1%25 match to SLBMANASE M92297 Streptomyces lividans b-mannanase (manA) gene%2C partial cds%2C from 14 to 1708;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6858430	6858435	.	+	.	ID=id8152;Note=possible RBS upstream of manA;gbkey=RBS
NC_003888.3	RefSeq	gene	6858440	6859594	.	+	.	ID=gene6296;Dbxref=GeneID:1101675;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;gene_synonym=manA;locus_tag=SCO6234
NC_003888.3	RefSeq	CDS	6858440	6859594	.	+	0	ID=cds6176;Parent=gene6296;Dbxref=Genbank:NP_630335.1,GeneID:1101675;Name=NP_630335.1;Note=SC2H4.16%2C manA%2C probable  beta-mannosidase%2C len: 384 aa%3B 94.5%25 identical to MANA_STRLI mannan endo-1%2C4-beta-mannosidase precursor (363 aa). Contains PS00659 Glycosyl hydrolases family 5 signature and Pfam match to entry PF00150 cellulase%2C Cellulase (glycosyl hydrolase family 5)%2C score 104.70%2C E-value 1.8e-27;gbkey=CDS;gene=manA;product=beta-mannosidase;protein_id=NP_630335.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6858572	6859345	.	+	.	ID=id8153;Dbxref=GeneID:1101675;Note=Pfam match to entry PF00150 cellulase%2C Cellulase (glycosyl hydrolase family 5)%2C score 104.70%2C E-value 1.8e-27;gbkey=misc_feature;gene=manA
NC_003888.3	RefSeq	sequence_feature	6858911	6858940	.	+	.	ID=id8154;Dbxref=GeneID:1101675;Note=PS00659 Glycosyl hydrolases family 5 signature;gbkey=misc_feature;gene=manA
NC_003888.3	RefSeq	gene	6859658	6859903	.	-	.	ID=gene6297;Dbxref=GeneID:1101676;Name=SC2H4.17c;gbkey=Gene;gene=SC2H4.17c;gene_biotype=protein_coding;gene_synonym=SC2H4.17c;locus_tag=SCO6235
NC_003888.3	RefSeq	CDS	6859658	6859903	.	-	0	ID=cds6177;Parent=gene6297;Dbxref=Genbank:NP_630336.1,GeneID:1101676;Name=NP_630336.1;Note=SC2H4.17c%2C unknown%2C len: 81 aa%3B similar to S. coelicolor TR:Q53896 (EMBL:X60316) abaA orfD (75 aa)%2C fasta scores%3B opt: 121 z-score: 174.5 E(): 0.018%2C 37.7%25 identity in 53 aa overlap. Also similar to SC4G2.04 (E(): 4.6e-12%2C 54.5%25 identity in 55 aa overlap);gbkey=CDS;gene=SC2H4.17c;product=hypothetical protein;protein_id=NP_630336.1;transl_table=11
NC_003888.3	RefSeq	gene	6859900	6860775	.	-	.	ID=gene6298;Dbxref=GeneID:1101677;Name=SC2H4.18c;gbkey=Gene;gene=SC2H4.18c;gene_biotype=protein_coding;gene_synonym=SC2H4.18c,SCAH10.01c;locus_tag=SCO6236
NC_003888.3	RefSeq	CDS	6859900	6860775	.	-	0	ID=cds6178;Parent=gene6298;Dbxref=Genbank:NP_733694.1,GeneID:1101677;Name=NP_733694.1;Note=SCAH10.01c%2C possible DNA-binding protein%2C len: >270 aa%3B similar to TR:Q9Z543 (EMBL:AL035212) Streptomyces coelicolor binding protein%2C SC9B2.16c%2C len: 303 aa%3B fasta scores: opt: 466 z-score: 574.2 E(): 1.3e-24%3B 34.1%25 identity in 252 aa overlap. Contains a possible helix-turn-helix motif between residues 612..677 (+3.39 SD)~SC2H4.18c%2C unknown%2C partial CDS%2C len: >55 aa%3B some similarity to the C-terminus of S. coelicolor hypothetical protein SC4G2.03%2C fasta scores%3B (E(): 0.018%2C 32.7%25 identity in 52 aa overlap);gbkey=CDS;gene=SC2H4.18c;product=DNA-binding protein;protein_id=NP_733694.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6859908	6859912	.	-	.	ID=id8155;Dbxref=GeneID:1101677;Note=possible RBS upstream of SC2H4.18c;gbkey=RBS;gene=SC2H4.18c
NC_003888.3	RefSeq	gene	6860882	6861364	.	+	.	ID=gene6299;Dbxref=GeneID:1101678;Name=SCAH10.02;gbkey=Gene;gene=SCAH10.02;gene_biotype=protein_coding;gene_synonym=SCAH10.02;locus_tag=SCO6237
NC_003888.3	RefSeq	CDS	6860882	6861364	.	+	0	ID=cds6179;Parent=gene6299;Dbxref=Genbank:NP_630337.1,GeneID:1101678;Name=NP_630337.1;Note=SCAH10.02%2C possible regulatory protein%2C len: 160 aa%3B similar to TR:Q53897 (EMBL:X60316) Streptomyces coelicolor A3(2) ORFA in AbaA gene%2C len: 192 aa%3B fasta scores: opt: 245 z-score: 318.1 E(): 2.4e-10%3B 36.5%25 identity in 148 aa overlap and to TR:O86675 (EMBL:SC4G2) Streptomyces coelicolor SC4G2.02c%2C 196 aa%3B fasta scores: opt: 436 z-score: 440.2 E(): 3.4e-19%3B 51.4%25 identity in 138 aa overlap;gbkey=CDS;gene=SCAH10.02;product=regulatory protein;protein_id=NP_630337.1;transl_table=11
NC_003888.3	RefSeq	gene	6861417	6862082	.	+	.	ID=gene6300;Dbxref=GeneID:1101679;Name=SCAH10.03;gbkey=Gene;gene=SCAH10.03;gene_biotype=protein_coding;gene_synonym=SCAH10.03;locus_tag=SCO6238
NC_003888.3	RefSeq	CDS	6861417	6862082	.	+	0	ID=cds6180;Parent=gene6300;Dbxref=Genbank:NP_630338.1,GeneID:1101679;Name=NP_630338.1;Note=SCAH10.03%2C hypothetical protein%2C len: 221 aa%3B similar to various hypothetical proteins%2C e.g. TR:O53480 (EMBL:AL021899) Mycobacterium tuberculosis hypothetical 23.2 kD protein%2C 213 aa%3B fasta scores: opt: 381 z-score: 468.2 E(): 1e-18%3B 38.3%25 identity in 201 aa overlap;gbkey=CDS;gene=SCAH10.03;product=hypothetical protein;protein_id=NP_630338.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6862178	6864221	.	+	.	ID=id8156;Note=region of very low C+G content (62.91%25);gbkey=misc_feature
NC_003888.3	RefSeq	gene	6862307	6863275	.	-	.	ID=gene6301;Dbxref=GeneID:1101680;Name=SCAH10.04c;gbkey=Gene;gene=SCAH10.04c;gene_biotype=protein_coding;gene_synonym=SCAH10.04c;locus_tag=SCO6239
NC_003888.3	RefSeq	CDS	6862307	6863275	.	-	0	ID=cds6181;Parent=gene6301;Dbxref=Genbank:NP_630339.1,GeneID:1101680;Name=NP_630339.1;Note=SCAH10.04c%2C possible sigma factor%2C len: 322 aa%3B similar to TR:CAB42013 (EMBL:AL049754) Streptomyces coelicolor sigma factor%2C SCH10.04c%2C 294 aa%3B fasta scores: opt: 379 z-score: 438.7 E(): 4.6e-17%3B 34.7%25 identity in 291 aa overlap and to (EMBL:AL132707) Streptomyces coelicolor SCF51.13c%2C 298 aa%3B fasta scores: opt: 833 z-score: 802.7 E(): 0%3B 44.9%25 identity in 305 aa overlap;gbkey=CDS;gene=SCAH10.04c;product=sigma factor;protein_id=NP_630339.1;transl_table=11
NC_003888.3	RefSeq	gene	6863358	6864092	.	-	.	ID=gene6302;Dbxref=GeneID:1101681;Name=SCAH10.05c;gbkey=Gene;gene=SCAH10.05c;gene_biotype=protein_coding;gene_synonym=SCAH10.05c;locus_tag=SCO6240
NC_003888.3	RefSeq	CDS	6863358	6864092	.	-	0	ID=cds6182;Parent=gene6302;Dbxref=Genbank:NP_630340.1,GeneID:1101681;Name=NP_630340.1;Note=SCAH10.05c%2C hypothetical protein%2C len: 244 aa%3B similar to various hypothetical proteins%2C e.g. TR:CAB52958 (EMBL:AL109950) Streptomyces coelicolor hypothetical 25.2 KD protein SCJ4.24c%2C len: 242 aa%3B fasta scores: opt: 504 z-score: 580.0 E(): 6.2e-25%3B 36.9%25 identity in 241 aa overlap;gbkey=CDS;gene=SCAH10.05c;product=hypothetical protein;protein_id=NP_630340.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6864101	6864104	.	-	.	ID=id8157;gbkey=RBS
NC_003888.3	RefSeq	gene	6864326	6864658	.	+	.	ID=gene6303;Dbxref=GeneID:1101682;Name=SCAH10.06;gbkey=Gene;gene=SCAH10.06;gene_biotype=protein_coding;gene_synonym=SCAH10.06;locus_tag=SCO6241
NC_003888.3	RefSeq	CDS	6864326	6864658	.	+	0	ID=cds6183;Parent=gene6303;Dbxref=Genbank:NP_630341.1,GeneID:1101682;Name=NP_630341.1;Note=SCAH10.06%2C unknown%2C len: 110 aa;gbkey=CDS;gene=SCAH10.06;product=hypothetical protein;protein_id=NP_630341.1;transl_table=11
NC_003888.3	RefSeq	gene	6864755	6865669	.	+	.	ID=gene6304;Dbxref=GeneID:1101683;Name=SCAH10.07;gbkey=Gene;gene=SCAH10.07;gene_biotype=protein_coding;gene_synonym=SCAH10.07;locus_tag=SCO6242
NC_003888.3	RefSeq	CDS	6864755	6865669	.	+	0	ID=cds6184;Parent=gene6304;Dbxref=Genbank:NP_630342.1,GeneID:1101683;Name=NP_630342.1;Note=SCAH10.07%2C hypothetical protein%2C len: 304 aa%3B similar to TR:Q9RCK7 (EMBL:AJ242827) Streptomyces tendae hypothetical protein (fragment) 266 aa%3B fasta scores: opt: 739 Z-score: 852.1 E(): 7.9e-40%3B 54.435%25 identity in 248 aa overlap;gbkey=CDS;gene=SCAH10.07;product=hypothetical protein;protein_id=NP_630342.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6865677	6865715	.	+	.	ID=id8158;Note=5717 CCGCGCCCCCGGTGCCG 5733-5755 GGCGCGGGGGCCACGGC 5739;gbkey=stem_loop
NC_003888.3	RefSeq	gene	6865736	6867358	.	-	.	ID=gene6305;Dbxref=GeneID:1101684;Name=aceB1;gbkey=Gene;gene=aceB1;gene_biotype=protein_coding;gene_synonym=aceB1,SCAH10.08c;locus_tag=SCO6243
NC_003888.3	RefSeq	CDS	6865736	6867358	.	-	0	ID=cds6185;Parent=gene6305;Dbxref=Genbank:NP_630343.1,GeneID:1101684;Name=NP_630343.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;gene=aceB1;product=malate synthase;protein_id=NP_630343.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6865742	6867322	.	-	.	ID=id8159;Dbxref=GeneID:1101684;Note=Pfam match to entry PF01274 Malate_synthase%2C Malate synthase%2C score 947.60%2C E-value 3.3e-281;gbkey=misc_feature;gene=aceB1
NC_003888.3	RefSeq	sequence_feature	6866507	6866554	.	-	.	ID=id8160;Dbxref=GeneID:1101684;Note=PS00510 Malate synthase signature;gbkey=misc_feature;gene=aceB1
NC_003888.3	RefSeq	gene	6867543	6868166	.	-	.	ID=gene6306;Dbxref=GeneID:1101685;Name=SCAH10.09c;gbkey=Gene;gene=SCAH10.09c;gene_biotype=protein_coding;gene_synonym=SCAH10.09c;locus_tag=SCO6244
NC_003888.3	RefSeq	CDS	6867543	6868166	.	-	0	ID=cds6186;Parent=gene6306;Dbxref=Genbank:NP_630344.1,GeneID:1101685;Name=NP_630344.1;Note=SCAH10.09c%2C hypothetical protein%2C len: 207 aa%3B highly similar to TR:P72363 (EMBL:U63518) Streptomyces arenae ORFuMS%2C len: 201 aa%3B fasta scores: opt: 498 z-score: 585.3 E(): 3.2e-25%3B 48.8%25 identity in 209 aa overlap;gbkey=CDS;gene=SCAH10.09c;product=hypothetical protein;protein_id=NP_630344.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6868169	6868173	.	-	.	ID=id8161;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6868313	6868316	.	+	.	ID=id8162;gbkey=RBS
NC_003888.3	RefSeq	gene	6868320	6868634	.	+	.	ID=gene6307;Dbxref=GeneID:1101686;Name=SCAH10.10;gbkey=Gene;gene=SCAH10.10;gene_biotype=protein_coding;gene_synonym=SCAH10.10;locus_tag=SCO6245
NC_003888.3	RefSeq	CDS	6868320	6868634	.	+	0	ID=cds6187;Parent=gene6307;Dbxref=Genbank:NP_630345.1,GeneID:1101686;Name=NP_630345.1;Note=SCAH10.10%2C unknown%2C len: 104 aa;gbkey=CDS;gene=SCAH10.10;product=hypothetical protein;protein_id=NP_630345.1;transl_table=11
NC_003888.3	RefSeq	gene	6868657	6869469	.	-	.	ID=gene6308;Dbxref=GeneID:1101687;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;gene_synonym=iclR,SCAH10.11c;locus_tag=SCO6246
NC_003888.3	RefSeq	CDS	6868657	6869469	.	-	0	ID=cds6188;Parent=gene6308;Dbxref=Genbank:NP_630346.1,GeneID:1101687;Name=NP_630346.1;Note=SCAH10.11c%2C iclR%2C transcriptional regulator for glyoxylate bypass%2C len: 270 aa%3B highly similar to SW:ICLR_ECOLI (EMBL:M31761) Escherichia coli acetate operon repressor IclR%2C 274 aa%3B fasta scores: opt: 538 Z-score: 603.9 E(): 5.5e-26%3B 40.234%25 identity in 256 aa overlap and to SW:GYLR_STRCO (EMBL:X14188) Streptomyces coelicolor glycerol operon regulatory protein%2C 254 aa%3B fasta scores: opt: 333 z-score: 389.8 E(): 2.4e-14%3B 32.8%25 identity in 250 aa overlap. Contains match to Pfam entry PF01614 IclR%2C Bacterial transcriptional regulator and a possible helix-turn-helix motif at residues 39..60 (+2.51 SD);gbkey=CDS;gene=iclR;product=transcriptional regulator for glyoxylate bypass;protein_id=NP_630346.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6868699	6869244	.	-	.	ID=id8163;Dbxref=GeneID:1101687;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 192.80%2C E-value 5.3e-54;gbkey=misc_feature;gene=iclR
NC_003888.3	RefSeq	gene	6869725	6871062	.	+	.	ID=gene6309;Dbxref=GeneID:1101688;Name=SCAH10.12;gbkey=Gene;gene=SCAH10.12;gene_biotype=protein_coding;gene_synonym=SCAH10.12;locus_tag=SCO6247
NC_003888.3	RefSeq	CDS	6869725	6871062	.	+	0	ID=cds6189;Parent=gene6309;Dbxref=Genbank:NP_630347.1,GeneID:1101688;Name=NP_630347.1;Note=SCAH10.12%2C possible allantoinase%2C len: 445 aa%3B similar SW:ALLA_YEAST (EMBL:M69294) Saccharomyces cerevisiae%2C allantoinase 460 aa%3B fasta scores: opt: 1232 z-score: 1441.5 E():0 %3B 48.3%25 identity in 408 aa overlap and to SW:ALLA_BACSU (EMBL:Z99120) Bacillus subtilis  allantoinase (EC 3.5.2.5) YunH%2C 446 aa%3B fasta scores: opt: 973 z-score: 1139.0 E(): 0%3B 36.5%25 identity in 444 aa overlap. Contains match to Pfam entry PF00744 Dihydrooratase%2C Dihydroorotase-like;gbkey=CDS;gene=SCAH10.12;product=allantoinase;protein_id=NP_630347.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6869860	6871008	.	+	.	ID=id8164;Dbxref=GeneID:1101688;Note=Pfam match to entry PF00744 Dihydrooratase%2C Dihydroorotase-like%2C score 316.20%2C E-value 4e-91;gbkey=misc_feature;gene=SCAH10.12
NC_003888.3	RefSeq	gene	6871127	6872257	.	+	.	ID=gene6310;Dbxref=GeneID:1101689;Name=SCAH10.13;gbkey=Gene;gene=SCAH10.13;gene_biotype=protein_coding;gene_synonym=SCAH10.13;locus_tag=SCO6248
NC_003888.3	RefSeq	CDS	6871127	6872257	.	+	0	ID=cds6190;Parent=gene6310;Dbxref=Genbank:NP_630348.1,GeneID:1101689;Name=NP_630348.1;Note=catalyzes the formation of S-ureidoglycolate and urea from allantoate;gbkey=CDS;gene=SCAH10.13;product=allantoicase;protein_id=NP_630348.1;transl_table=11
NC_003888.3	RefSeq	gene	6872329	6873105	.	-	.	ID=gene6311;Dbxref=GeneID:1101690;Name=SCAH10.14c;gbkey=Gene;gene=SCAH10.14c;gene_biotype=protein_coding;gene_synonym=SCAH10.14c;locus_tag=SCO6249
NC_003888.3	RefSeq	CDS	6872329	6873105	.	-	0	ID=cds6191;Parent=gene6311;Dbxref=Genbank:NP_630349.1,GeneID:1101690;Name=NP_630349.1;Note=SCAH10.14c%2C probable 3-oxoacyl-[acyl-carrier-protein] reductase%2C len: 258 aa%3B similar to TR:CAB42951 (EMBL:AL049863) Streptomyces coelicolor dehydrogenase/reductase%2C SC5H1.26%2C 245 aa%3B fasta scores: opt: 560 z-score: 573.5 E(): 1.4e-24%3B 45.1%25 identity in 246 aa overlap and to SW:FABG_BACSU (EMBL:U59433) Bacillus subtilis%2C 3-oxoacyl-[acyl-carrier-protein] reductase%2C FabG 246 aa%3B fasta scores: opt: 471 z-score: 484.6 E(): 1.3e-19%3B 36.0%25 identity in 247 aa overlap;gbkey=CDS;gene=SCAH10.14c;product=3-oxoacyl-ACP reductase;protein_id=NP_630349.1;transl_table=11
NC_003888.3	RefSeq	gene	6873167	6873760	.	+	.	ID=gene6312;Dbxref=GeneID:1101691;Name=SCAH10.15;gbkey=Gene;gene=SCAH10.15;gene_biotype=protein_coding;gene_synonym=SCAH10.15;locus_tag=SCO6250
NC_003888.3	RefSeq	CDS	6873167	6873760	.	+	0	ID=cds6192;Parent=gene6312;Dbxref=Genbank:NP_630350.1,GeneID:1101691;Name=NP_630350.1;Note=SCAH10.15%2C probable transport protein%2C len: 197 aa%3B similar to C-terminus of TR:CAB55652 (EMBL:AL117385) Streptomyces coelicolor transmembrane efflux protein SC5G9.04c 489 aa%3B fasta scores: opt: 230 z-score: 254.1 E(): 8.8e-07%3B 33.5%25 identity in 185 aa overlap and to C-terminus of SW:PUR8_STRLP (EMBL:X76855) Streptomyces lipmanii (Streptomyces alboniger) puromycin resistance protein%2C Pur8%2C 503 aa%3B fasta scores: opt: 237 z-score: 261.4 E(): 3.5e-07%3B 30.2%25 identity in 162 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCAH10.15;product=transporter;protein_id=NP_630350.1;transl_table=11
NC_003888.3	RefSeq	gene	6873849	6874406	.	+	.	ID=gene6313;Dbxref=GeneID:1101692;Name=SCAH10.16;gbkey=Gene;gene=SCAH10.16;gene_biotype=protein_coding;gene_synonym=SCAH10.16;locus_tag=SCO6251
NC_003888.3	RefSeq	CDS	6873849	6874406	.	+	0	ID=cds6193;Parent=gene6313;Dbxref=Genbank:NP_630351.1,GeneID:1101692;Name=NP_630351.1;Note=SCAH10.16%2C possible reductase%2C len: 185 aa%3B similar to TR:Q9ZGD0 (EMBL:AF080235) Streptomyces cyanogenus reductase homologue LanO%2C len: 193 aa%3B fasta scores: opt: 398 z-score: 505.3 E(): 9e-21%3B 41.0%25 identity in 188 aa overlap;gbkey=CDS;gene=SCAH10.16;product=reductase;protein_id=NP_630351.1;transl_table=11
NC_003888.3	RefSeq	gene	6874704	6874904	.	-	.	ID=gene6314;Dbxref=GeneID:1101693;Name=SCAH10.17c;gbkey=Gene;gene=SCAH10.17c;gene_biotype=protein_coding;gene_synonym=SCAH10.17c;locus_tag=SCO6252
NC_003888.3	RefSeq	CDS	6874704	6874904	.	-	0	ID=cds6194;Parent=gene6314;Dbxref=Genbank:NP_630352.1,GeneID:1101693;Name=NP_630352.1;Note=SCAH10.17c%2C membrane protein%2C len: 66 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCAH10.17c;product=hypothetical protein;protein_id=NP_630352.1;transl_table=11
NC_003888.3	RefSeq	gene	6875083	6876336	.	+	.	ID=gene6315;Dbxref=GeneID:1101694;Name=SCAH10.18;gbkey=Gene;gene=SCAH10.18;gene_biotype=protein_coding;gene_synonym=SCAH10.18;locus_tag=SCO6253
NC_003888.3	RefSeq	CDS	6875083	6876336	.	+	0	ID=cds6195;Parent=gene6315;Dbxref=Genbank:NP_630353.1,GeneID:1101694;Name=NP_630353.1;Note=SCAH10.18%2C possible two-component sensor kinase%2C len: 417 aa%3B similar to TR:O86631 EMBL%3B AL031155 Streptomyces coelicolor  two-component sensor SC3A7.30%2C 429 aa%3B fasta scores: opt: 588 z-score: 615.4 E(): 6.6e-27%3B 35.0%25 identity in 412 aa overlap and C-terminus to C-terminus of TR:Q53893 (EMBL:U51332) Streptomyces coelicolor AbsA1%2C 571 aa%3B fasta scores: opt: 477 z-score: 492.4 E(): 4.7e-20%3B 40.1%25 identity in 262 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCAH10.18;product=two-component sensor kinase;protein_id=NP_630353.1;transl_table=11
NC_003888.3	RefSeq	gene	6876381	6877070	.	+	.	ID=gene6316;Dbxref=GeneID:1101695;Name=SCAH10.19;gbkey=Gene;gene=SCAH10.19;gene_biotype=protein_coding;gene_synonym=SCAH10.19;locus_tag=SCO6254
NC_003888.3	RefSeq	CDS	6876381	6877070	.	+	0	ID=cds6196;Parent=gene6316;Dbxref=Genbank:NP_630354.1,GeneID:1101695;Name=NP_630354.1;Note=SCAH10.19%2C possible two-component system response regulator%2C 229 aa%3B similar to TR:Q53894 (EMBL:U51332) Streptomyces coelicolor AbsA2%2C 222 aa%3B fasta scores: opt: 573 z-score: 662.7 E(): 1.5e-29%3B 45.7%25 identity in 221 aa overlap%2C to SW:NARL_ECOLI (EMBL:X13360) Escherichia coli nitrate/nitrite response regulator protein 216 aa%3B fasta scores: opt: 457 z-score: 531.1 E(): 3.3e-22%3B 36.1%25 identity in 208 aa overlap and to TR:CAB40929 (EMBL:SCE126) Streptomyces coelicolor SCE126.07c%2C 224 aa%3B fasta scores: opt: 664 z-score: 584.6 E(): 3.1e-27%3B 48.4%25 identity in 219 aa overlap. Contains two matches to Pfam entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family;gbkey=CDS;gene=SCAH10.19;product=two-component system response regulator;protein_id=NP_630354.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6876390	6876731	.	+	.	ID=id8165;Dbxref=GeneID:1101695;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 132.70%2C E-value 6.7e-36;gbkey=misc_feature;gene=SCAH10.19
NC_003888.3	RefSeq	sequence_feature	6876852	6877049	.	+	.	ID=id8166;Dbxref=GeneID:1101695;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 50.60%2C E-value 3.4e-11;gbkey=misc_feature;gene=SCAH10.19
NC_003888.3	RefSeq	gene	6877162	6878175	.	-	.	ID=gene6317;Dbxref=GeneID:1101696;Name=SCAH10.20c;gbkey=Gene;gene=SCAH10.20c;gene_biotype=protein_coding;gene_synonym=SCAH10.20c;locus_tag=SCO6255
NC_003888.3	RefSeq	CDS	6877162	6878175	.	-	0	ID=cds6197;Parent=gene6317;Dbxref=Genbank:NP_630355.1,GeneID:1101696;Name=NP_630355.1;Note=SCAH10.20%2C possible dehydrogenase%2C len: 337 aa%3B similar to SW:STRI_STRGR (EMBL:Y00459) Stretomyces griseus streptomycin resistance protein StrI%2C 348 aa%3B fasta scores: opt: 582 z-score: 670.0 E(): 6.1e-30%3B 39.5%25 identity in 344 aa overlap and to SW:MI2D_BACSU (EMBL%3BM76431) Bacillus subtilis myo-inositol dehydrogenase (EC 1.1.1.18) Idh or IolG OR e83G%2C 330 aa%3B fasta scores: opt: 534 z-score: 615.6 E(): 6.5e-27%3B 28.8%25 identity in 351 aa overlap. Contains match to Pfam entry PF01408 GFO_IDH_MocA%2C oxidoreductase family;gbkey=CDS;gene=SCAH10.20c;product=dehydrogenase;protein_id=NP_630355.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6877456	6878019	.	-	.	ID=id8167;Dbxref=GeneID:1101696;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 30.70%2C E-value 1.3e-06;gbkey=misc_feature;gene=SCAH10.20c
NC_003888.3	RefSeq	gene	6878304	6879041	.	+	.	ID=gene6318;Dbxref=GeneID:1101697;Name=SCAH10.21;gbkey=Gene;gene=SCAH10.21;gene_biotype=protein_coding;gene_synonym=SCAH10.21;locus_tag=SCO6256
NC_003888.3	RefSeq	CDS	6878304	6879041	.	+	0	ID=cds6198;Parent=gene6318;Dbxref=Genbank:NP_630356.1,GeneID:1101697;Name=NP_630356.1;Note=SCAH10.21%2C possible transcriptional regulator%2C len: 245 aa%3B similar to SW:YURK_BACSU (EMBL:Z99120) Bacillus subtilis hypothetical transcriptional regulator in hom-MrgA intergenic region YurK%2C 242 aa%3B fasta scores: opt: 333 z-score: 402.6 E(): 4.7e-15%3B 26.8%25 identity in 235 aa overlap and to SW:FARR_ECOLI (EMBL:X15790) Escherichia coli%2C response regulator FarR%2C 240 aa%3B fasta scores: opt: 270 z-score: 328.3 E(): 6.5e-11%3B 26.1%25 identity in 226 aa overlap. Contains match to Pfam entry PF00392 gntR%2C bacterial regulatory proteins%2C gntR family and a possible helix-turn-helix motif at residues 18458..18523;gbkey=CDS;gene=SCAH10.21;product=transcriptional regulator;protein_id=NP_630356.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6878358	6878537	.	+	.	ID=id8168;Dbxref=GeneID:1101697;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 63.50%2C E-value 4.6e-18;gbkey=misc_feature;gene=SCAH10.21
NC_003888.3	RefSeq	gene	6879297	6880301	.	+	.	ID=gene6319;Dbxref=GeneID:1101698;Name=SCAH10.22;gbkey=Gene;gene=SCAH10.22;gene_biotype=protein_coding;gene_synonym=SCAH10.22;locus_tag=SCO6257
NC_003888.3	RefSeq	CDS	6879297	6880301	.	+	0	ID=cds6199;Parent=gene6319;Dbxref=Genbank:NP_630357.1,GeneID:1101698;Name=NP_630357.1;Note=SCAH10.22%2C probable ABC transport system sugar binding lipoprotein%2C len: 334 aa%3B similar to TR:CAB41563 (EMBL:AL049727) Streptomyces coelicolor  solute binding protein%2C 337 aa%3B fasta scores: opt: 1003 z-score: 1130.9 E():0%3B 49.8%25 identity in 325 aa overlap%2C to SW:RBSB_BACSU (EMBL:Z92953) Bacillus subtilis D-ribose-binding protein precursor RbsB%2C 305 aa%3B fasta scores: opt: 206 z-score: 238.7 E(): 6.3e-06%3B 23.0%25 identity in 235 aa overlap and to TR:CAB41563 (EMBL:SC9B1) Streptomyces coelicolor SC9B1.17c%2C 337 aa%3B fasta scores: opt: 1003 z-score: 1045.2 E(): 0%3B 49.8%25 identity in 325 aa overlap. Contains match to Pfam entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and a match situated in the correct position to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCAH10.22;product=ABC transporter sugar binding lipoprotein;protein_id=NP_630357.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6879333	6879365	.	+	.	ID=id8169;Dbxref=GeneID:1101698;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCAH10.22
NC_003888.3	RefSeq	sequence_feature	6879441	6880166	.	+	.	ID=id8170;Dbxref=GeneID:1101698;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 13.80%2C E-value 2.1e-06;gbkey=misc_feature;gene=SCAH10.22
NC_003888.3	RefSeq	gene	6880298	6881338	.	+	.	ID=gene6320;Dbxref=GeneID:1101699;Name=SCAH10.23;gbkey=Gene;gene=SCAH10.23;gene_biotype=protein_coding;gene_synonym=SCAH10.23;locus_tag=SCO6258
NC_003888.3	RefSeq	CDS	6880298	6881338	.	+	0	ID=cds6200;Parent=gene6320;Dbxref=Genbank:NP_630358.1,GeneID:1101699;Name=NP_630358.1;Note=SCAH10.23%2C probable ABC transport system sugar permease%2C len: 346 aa%3B similar to TR:O68120 (EMBL:AF010496) Rhodobacter capsulatus ribose transport system permease RbsC%3B fasta scores: opt: 445 z-score: 508.0 E(): 6.4e-21%3B 30.5%25 identity in 351 aa overlap and to SW:RBSC_ECOLI (EMBL:L10328) Escherichia coli ribose transport system permease RbsC%2C len: 321 aa%3B fasta scores: opt: 286 z-score: 329.9 E(): 5.3e-11%3B 30.1%25 identity in 329 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCAH10.23;product=sugar ABC transporter permease;protein_id=NP_630358.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6881324	6881327	.	+	.	ID=id8171;Dbxref=GeneID:1101699;gbkey=RBS;gene=SCAH10.23
NC_003888.3	RefSeq	gene	6881335	6882126	.	+	.	ID=gene6321;Dbxref=GeneID:1101700;Name=SCAH10.24;gbkey=Gene;gene=SCAH10.24;gene_biotype=protein_coding;gene_synonym=SCAH10.24;locus_tag=SCO6259
NC_003888.3	RefSeq	CDS	6881335	6882126	.	+	0	ID=cds6201;Parent=gene6321;Dbxref=Genbank:NP_630359.1,GeneID:1101700;Name=NP_630359.1;Note=SCAH10.24%2C probable ABC sugar transport ATP binding protein%2C len: 263 aa%3B similar to TR:O68121 (EMBL:AF010496) Rhodobacter capsulatus ribose transport ATP-binding protein%2C 305 aa%3B fasta scores: opt: 612 z-score: 706.1 E(): 5.9e-32%3B 45.6%25 identity in 217 aa overlap%2C to SW:RBSA_ECOLI (EMBL:M13169) Escherichia coli%2C ribose transport ATP-binding protein RbsA%2C 501 aa%3B fasta scores: opt: 509 z-score: 585.6 E(): 3e-25%3B 31.5%25 identity in 254 aa overlap and to TR:CAA15787 (EMBL:SC7B7) Streptomyces coelicolor St7B7.07%2C 260 aa%3B fasta scores: opt: 592 z-score: 521.2 E(): 1e-23%3B 43.1%25 identity in 246 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and Prosite PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SCAH10.24;product=sugar ABC transporter ATP-binding protein;protein_id=NP_630359.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6881440	6882015	.	+	.	ID=id8172;Dbxref=GeneID:1101700;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 168.70%2C E-value 9.6e-47;gbkey=misc_feature;gene=SCAH10.24
NC_003888.3	RefSeq	sequence_feature	6881461	6881484	.	+	.	ID=id8173;Dbxref=GeneID:1101700;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCAH10.24
NC_003888.3	RefSeq	sequence_feature	6881788	6881832	.	+	.	ID=id8174;Dbxref=GeneID:1101700;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCAH10.24
NC_003888.3	RefSeq	gene	6882242	6883390	.	+	.	ID=gene6322;Dbxref=GeneID:1101701;Name=SCAH10.25;gbkey=Gene;gene=SCAH10.25;gene_biotype=protein_coding;gene_synonym=SCAH10.25;locus_tag=SCO6260
NC_003888.3	RefSeq	CDS	6882242	6883390	.	+	0	ID=cds6202;Parent=gene6322;Dbxref=Genbank:NP_630360.1,GeneID:1101701;Name=NP_630360.1;Note=SCAH10.25%2C possible sugar kinase%2C len: 382 aa%3B similar to SW:GLK_STRCO (EMBL:X65932) Streptomyces coelicolor glucokinase (EC 2.7.1.2) (glucose kinase) Glk%2C 317 aa%3B fasta scores: opt: 1022 z-score: 1142.9 E(): 0%3B 46.6%25 identity in 311 aa overlap and to TR:CAB51974 EMBL:SC6E10 Streptomyces coelicolor SC6E10.20c%2C 317 aa%3B fasta scores: opt: 1022 z-score: 1035.4 E(): 0%3B 46.6%25 identity in 311 aa overlap. Contains a match to Pfam entry PF00480 ROK%2C ROK family and Prosite entry PS01125 ROK family signature;gbkey=CDS;gene=SCAH10.25;product=sugar kinase;protein_id=NP_630360.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6882359	6882904	.	+	.	ID=id8175;Dbxref=GeneID:1101701;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 215.50%2C E-value 5.4e-63;gbkey=misc_feature;gene=SCAH10.25
NC_003888.3	RefSeq	sequence_feature	6882740	6882823	.	+	.	ID=id8176;Dbxref=GeneID:1101701;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SCAH10.25
NC_003888.3	RefSeq	ribosome_entry_site	6883444	6883447	.	+	.	ID=id8177;gbkey=RBS
NC_003888.3	RefSeq	gene	6883459	6883968	.	+	.	ID=gene6323;Dbxref=GeneID:1101702;Name=SCAH10.26;gbkey=Gene;gene=SCAH10.26;gene_biotype=protein_coding;gene_synonym=SCAH10.26;locus_tag=SCO6261
NC_003888.3	RefSeq	CDS	6883459	6883968	.	+	0	ID=cds6203;Parent=gene6323;Dbxref=Genbank:NP_630361.1,GeneID:1101702;Name=NP_630361.1;Note=SCAH10.26%2C probable hypothetical protein%2C len: 169 aa%3B similar to TR:Q9F1W0 (EMBL:AB040071) Streptomyces griseus hypothetical protein%2C 198 aa%3B fasta scores: opt: 647 Z-score: 783.2 E(): 5.5e-36%3B 55.030%25 identity in 169 aa overlap. Contains possible N-terminal region signal sequence;gbkey=CDS;gene=SCAH10.26;product=hypothetical protein;protein_id=NP_630361.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6884122	6884126	.	+	.	ID=id8178;gbkey=RBS
NC_003888.3	RefSeq	gene	6884138	6887071	.	+	.	ID=gene6324;Dbxref=GeneID:1101703;Name=SCAH10.27;gbkey=Gene;gene=SCAH10.27;gene_biotype=protein_coding;gene_synonym=SCAH10.27;locus_tag=SCO6262
NC_003888.3	RefSeq	CDS	6884138	6887071	.	+	0	ID=cds6204;Parent=gene6324;Dbxref=Genbank:NP_630362.1,GeneID:1101703;Name=NP_630362.1;Note=SCAH10.27%2C possible helicase%2C len: 977 aa%3B similar to TR:O53499 (EMBL:AL021924) Mycobacterium tuberculosis helicase%2C 1013 aa%3B fasta scores: opt: 1308 z-score: 1370.7 E(): 0%3B 39.7%25 identity in 939 aa overlap. Contains two matches to Pfam entries PF00176 SNF2_N%2C SNF2 and others N-terminal domain and PF00271 helicase_C%2C Helicases conserved C-terminal domain;gbkey=CDS;gene=SCAH10.27;product=helicase;protein_id=NP_630362.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6885680	6886498	.	+	.	ID=id8179;Dbxref=GeneID:1101703;Note=Pfam match to entry PF00176 SNF2_N%2C SNF2 and others N-terminal domain%2C score 219.00%2C E-value 6.9e-62;gbkey=misc_feature;gene=SCAH10.27
NC_003888.3	RefSeq	sequence_feature	6886640	6886888	.	+	.	ID=id8180;Dbxref=GeneID:1101703;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 82.50%2C E-value 8.4e-21;gbkey=misc_feature;gene=SCAH10.27
NC_003888.3	RefSeq	ribosome_entry_site	6887058	6887062	.	+	.	ID=id8181;Dbxref=GeneID:1101703;gbkey=RBS;gene=SCAH10.27
NC_003888.3	RefSeq	gene	6887068	6889461	.	+	.	ID=gene6325;Dbxref=GeneID:1101704;Name=SCAH10.28;gbkey=Gene;gene=SCAH10.28;gene_biotype=protein_coding;gene_synonym=SCAH10.28;locus_tag=SCO6263
NC_003888.3	RefSeq	CDS	6887068	6889461	.	+	0	ID=cds6205;Parent=gene6325;Dbxref=Genbank:NP_630363.1,GeneID:1101704;Name=NP_630363.1;Note=SCAH10.28%2C conserved hypothetical protein%2C len: 797 aa%3B C-terminus identical to previously sequenced TR: O86854 (EMBL:AJ007731) Streptomyces coelicolor hypothetical 59.8 KD protein orfZ%2C 566 aa%3B fasta scores: opt: 3713 z-score: 2921.3 E(): 0%3B 96.6%25 identity in 559 aa overlap. Regions similar to others eg. TR:AAK46444 (EMBL:AE007065).;gbkey=CDS;gene=SCAH10.28;product=hypothetical protein;protein_id=NP_630363.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6887839	6894206	.	-	.	ID=id8182;Note=previously sequenced fragment TR:O007731 (EMBL:AJ007731) 99%25 identical;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6889624	6890412	.	+	.	ID=gene6326;Dbxref=GeneID:1101705;Name=SCAH10.29;gbkey=Gene;gene=SCAH10.29;gene_biotype=protein_coding;gene_synonym=SCAH10.29;locus_tag=SCO6264
NC_003888.3	RefSeq	CDS	6889624	6890412	.	+	0	ID=cds6206;Parent=gene6326;Dbxref=Genbank:NP_630364.1,GeneID:1101705;Name=NP_630364.1;Note=SCAH10.29%2C reductase orfX%2C len: 262 aa%3B identical to previously sequenced TR:O86853 (EMBL:AJ007731) Streptomyces coelicolor 3-ketoacyl-ACP/CoA reductase%2C 244 aa and to SW:VER1_ASPPA (EMBL:M91369) Aspergillus parasiticus versicolor reductase (EC 1.1.-.-)(ver-1) 262 aa%3B fasta scores opt: 571 z-score: 634.6 E(): 5.7e-28%3B 40.9%25 identity in 259 aa overlap. Contains match to Pfam entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SCAH10.29;product=reductase;protein_id=NP_630364.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6889666	6890235	.	+	.	ID=id8183;Dbxref=GeneID:1101705;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 194.60%2C E-value 1.6e-54;gbkey=misc_feature;gene=SCAH10.29
NC_003888.3	RefSeq	sequence_feature	6890086	6890172	.	+	.	ID=id8184;Dbxref=GeneID:1101705;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SCAH10.29
NC_003888.3	RefSeq	sequence_feature	6890299	6890391	.	+	.	ID=id8185;Dbxref=GeneID:1101705;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 45.40%2C E-value 1.3e-09;gbkey=misc_feature;gene=SCAH10.29
NC_003888.3	RefSeq	gene	6890528	6891175	.	-	.	ID=gene6327;Dbxref=GeneID:1101706;Name=SCAH10.30c;gbkey=Gene;gene=SCAH10.30c;gene_biotype=protein_coding;gene_synonym=SCAH10.30c,scbR;locus_tag=SCO6265
NC_003888.3	RefSeq	CDS	6890528	6891175	.	-	0	ID=cds6207;Parent=gene6327;Dbxref=Genbank:NP_630365.1,GeneID:1101706;Name=NP_630365.1;Note=SCAH10.30c%2C scbR%2C gamma-butyrolactone binding protein%2C len: 215 aa%3B identical to previously sequenced TR:O86852 (EMBL:AJ007731) Streptomyces coelicolor gamma-butyrolactone binding protein%2C 215 aa and to TR:O24741 (EMBL:AB001683) Streptomyces sp. FarA%2C 221 aa%3B fasta scores: opt: 771 z-score: 937.4 E(): 0%3B 57.2%25 identity in 208 aa overlap. Contains match to Pfam entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and to Prosite entry PS01081 Bacterial regulatory proteins%2C tetR family signature. Contains also a possible helix-turn-helix motif at residues 30..51 (+3.66 SD);gbkey=CDS;gene=SCAH10.30c;product=gamma-butyrolactone binding protein;protein_id=NP_630365.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6890996	6891136	.	-	.	ID=id8186;Dbxref=GeneID:1101706;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 55.50%2C E-value 1.1e-13;gbkey=misc_feature;gene=SCAH10.30c
NC_003888.3	RefSeq	sequence_feature	6891008	6891100	.	-	.	ID=id8187;Dbxref=GeneID:1101706;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature;gbkey=misc_feature;gene=SCAH10.30c
NC_003888.3	RefSeq	ribosome_entry_site	6891181	6891185	.	-	.	ID=id8188;gbkey=RBS
NC_003888.3	RefSeq	gene	6891293	6892237	.	+	.	ID=gene6328;Dbxref=GeneID:1101707;Name=SCAH10.31;gbkey=Gene;gene=SCAH10.31;gene_biotype=protein_coding;gene_synonym=SCAH10.31,scbA;locus_tag=SCO6266
NC_003888.3	RefSeq	CDS	6891293	6892237	.	+	0	ID=cds6208;Parent=gene6328;Dbxref=Genbank:NP_630366.1,GeneID:1101707;Name=NP_630366.1;Note=SCAH10.31%2C scbA%2C len: 314 aa%3B identical to previously sequenced TR:O86851 (EMBL:AJ007731) Streptomyces coelicolor ScbA protein%2C 314 aa and to SW:AFSA_STRGR (EMBL:M24250) Streptomyces griseus possible A-factor biosynthesis enzyme AfsA%2C 301 aa%3B fasta scores: opt: 1345 z-score: 1570.4 E(): 0%3B 66.1%25 identity in 292 aa overlap;gbkey=CDS;gene=SCAH10.31;product=ScbA protein;protein_id=NP_630366.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	6892243	6892283	.	+	.	ID=id8189;Note=32283 GGCCCCGGGGCGCGAAC 32299-32307 CCGGGGCCCCGCGCTTG 32323;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	6892341	6892345	.	+	.	ID=id8190;gbkey=RBS
NC_003888.3	RefSeq	gene	6892353	6893207	.	+	.	ID=gene6329;Dbxref=GeneID:1101708;Name=SCAH10.32;gbkey=Gene;gene=SCAH10.32;gene_biotype=protein_coding;gene_synonym=SCAH10.32;locus_tag=SCO6267
NC_003888.3	RefSeq	CDS	6892353	6893207	.	+	0	ID=cds6209;Parent=gene6329;Dbxref=Genbank:NP_630367.1,GeneID:1101708;Name=NP_630367.1;Note=SCAH10.32%2C hypothetical protein orfA%2C len: 284 aa%3B identical to previously sequenced TR:O86850 (EMBL:AJ007731) Streptomyces coelicolor hypothetical 31.0 kD protein%2C 284 aa and to various hypothetical proteins%2C e.g. TR:O68920 (EMBL:AF058302) Streptomyces roseofulvus FrnS%2C 305 aa%3B fasta scores: opt: 591 z-score: 680.7 E(): 1.5e-30%3B 41.5%25 identity in 282 aa overlap;gbkey=CDS;gene=SCAH10.32;product=hypothetical protein;protein_id=NP_630367.1;transl_table=11
NC_003888.3	RefSeq	gene	6893258	6894022	.	-	.	ID=gene6330;Dbxref=GeneID:1101709;Name=SCAH10.33c;gbkey=Gene;gene=SCAH10.33c;gene_biotype=protein_coding;gene_synonym=SCAH10.33c;locus_tag=SCO6268
NC_003888.3	RefSeq	CDS	6893258	6894022	.	-	0	ID=cds6210;Parent=gene6330;Dbxref=Genbank:NP_630368.1,GeneID:1101709;Name=NP_630368.1;Note=SCAH10.33c%2C possible histidine kinase orfB%2C len: 254 aa%3B identical to previously sequenced TR:O86849 (EMBL:AJ007731) Streptomyces coelicolor histidine kinase ORFB%2C 310 aa and to SW:UHPB_SALTY (EMBL:M89480) Salmonella typhimurium sensor protein UhpB%2C 500 aa%3B fasta scores: opt: 219 z-score: 254.8 E(): 8e-07%3B 33.3%25 identity in 204 aa overlap. Contains a match to Prosite entry PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=CDS;gene=SCAH10.33c;product=histidine kinase;protein_id=NP_630368.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6894028	6894031	.	-	.	ID=id8191;gbkey=RBS
NC_003888.3	RefSeq	gene	6894148	6895200	.	-	.	ID=gene6331;Dbxref=GeneID:1101710;Name=SCAH10.34c;gbkey=Gene;gene=SCAH10.34c;gene_biotype=protein_coding;gene_synonym=SCAH10.34c;locus_tag=SCO6269
NC_003888.3	RefSeq	CDS	6894148	6895200	.	-	0	ID=cds6211;Parent=gene6331;Dbxref=Genbank:NP_630369.1,GeneID:1101710;Name=NP_630369.1;Note=catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin;gbkey=CDS;gene=SCAH10.34c;product=2-oxoglutarate ferredoxin oxidoreductase subunit beta;protein_id=NP_630369.1;transl_table=11
NC_003888.3	RefSeq	gene	6895193	6897085	.	-	.	ID=gene6332;Dbxref=GeneID:1101711;Name=SCAH10.35c;gbkey=Gene;gene=SCAH10.35c;gene_biotype=protein_coding;gene_synonym=SCAH10.35c;locus_tag=SCO6270
NC_003888.3	RefSeq	CDS	6895193	6897085	.	-	0	ID=cds6212;Parent=gene6332;Dbxref=Genbank:NP_630370.1,GeneID:1101711;Name=NP_630370.1;Note=SCAH10.35c%2C possible oxidoreductase alpha-subunit%2C len: 630 aa%3B similar to TR:O53182 (EMBL:AL021246) Mycobacterium tuberculosis oxidoreductase alpha-subunit%2C 653 aa%3B fasta scores: opt: 2008 z-score: 2153.9 E(): 0%3B 66.4%25 identity in 614 aa overlap;gbkey=CDS;gene=SCAH10.35c;product=oxidoreductase alpha-subunit;protein_id=NP_630370.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6895207	6895211	.	-	.	ID=id8192;Dbxref=GeneID:1101711;gbkey=RBS;gene=SCAH10.35c
NC_003888.3	RefSeq	gene	6897089	6898861	.	-	.	ID=gene6333;Dbxref=GeneID:1101712;Name=accA1;gbkey=Gene;gene=accA1;gene_biotype=protein_coding;gene_synonym=accA1,SC2C4.01c,SCAH10.36c;locus_tag=SCO6271
NC_003888.3	RefSeq	CDS	6897089	6898861	.	-	0	ID=cds6213;Parent=gene6333;Dbxref=Genbank:NP_733754.1,GeneID:1101712;Name=NP_733754.1;Note=SCAH10.36c%2C accA1%2C probable acyl-CoA carboxylase complex (partial)%2C len: >137 aa%3B identical to previously sequenced TR:AAD28553 (EMBL:AF113603) Streptomyces coelicolor acyl-CoA carboxylase complex A subunit%2C AccA1%2C 590 aa%2C to TR:AAD37851 (EMBL:AF126429) Streptomyces venezuelae JadJ%2C 584 aa%3B fasta scores: opt: 674 z-score: 748.1 E(): 0%3B 79.7%25 identity in 138 aa overlap and to TR:Q54119 (EMBL:X92557) Saccharopolyspora erythraea (Streptomyces erythraeus) biotin carboxylase and biotin carboxyl carrier protein BcpA2%2C 591 aa%3B fasta scores: opt: 455 z-score: 508.1 E(): 6.3e-21%3B 55.6%25 identity in 133 aa overlap~SC2C4.01c%2C accA1%2C acyl-CoA carboxylase complex A subunit (fragment)%2C len: >491 aa%3B identical to N-terminal region of previously sequenced TR:Q9X4K6 (EMBL:AF113603) Streptomyces coelicolor acyl-CoA carboxylase complex A subunit AccA1%2C 590 aa and also identical to N-terminal region of TR:Q9X4K6 (EMBL:AF113604) Streptomyces coelicolor acyl-CoA carboxylase complex A subunit AccA2%2C 590 aa. Contains Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase) and match to Prosite entry PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=CDS;gene=accA1;product=acyl-CoA carboxylase complex A subunit;protein_id=NP_733754.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6897386	6898861	.	-	.	ID=id8193;Dbxref=GeneID:1101712;Note=previously sequenced DNA fragment. EMBL:AF113603 Streptomyces coelicolor acyl-CoA carboxylase complex A subunit (accA1) gene%2C complete cds.;gbkey=misc_feature;gene=accA1
NC_003888.3	RefSeq	sequence_feature	6897758	6898855	.	-	.	ID=id8194;Dbxref=GeneID:1101712;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 585.30%2C E-value 3.8e-172;gbkey=misc_feature;gene=accA1
NC_003888.3	RefSeq	sequence_feature	6897986	6898009	.	-	.	ID=id8195;Dbxref=GeneID:1101712;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=accA1
NC_003888.3	RefSeq	ribosome_entry_site	6898869	6898873	.	-	.	ID=id8196;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6899158	6899162	.	+	.	ID=id8197;gbkey=RBS
NC_003888.3	RefSeq	gene	6899170	6900822	.	+	.	ID=gene6334;Dbxref=GeneID:1101713;Name=SC2C4.02;gbkey=Gene;gene=SC2C4.02;gene_biotype=protein_coding;gene_synonym=SC2C4.02;locus_tag=SCO6272
NC_003888.3	RefSeq	CDS	6899170	6900822	.	+	0	ID=cds6214;Parent=gene6334;Dbxref=Genbank:NP_630371.1,GeneID:1101713;Name=NP_630371.1;Note=SC2C4.02%2C possible  FAD-binding protein%2C len: 550 aa%3B similar to TR:Q9ZAR8 (EMBL:U80222) Streptomyces peucetius ceasius DnrW%2C 485 aa%3B fasta scores: opt: 1323 z-score: 1315.4 E(): 0%3B 45.3%25 identity in 470 aa overlap. Contains Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC2C4.02;product=FAD-binding protein;protein_id=NP_630371.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6899332	6899919	.	+	.	ID=id8198;Dbxref=GeneID:1101713;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 6.50%2C E-value 1.1e-06;gbkey=misc_feature;gene=SC2C4.02
NC_003888.3	RefSeq	gene	6900898	6907356	.	-	.	ID=gene6335;Dbxref=GeneID:1101714;Name=SC2C4.03c;gbkey=Gene;gene=SC2C4.03c;gene_biotype=protein_coding;gene_synonym=SC2C4.03c;locus_tag=SCO6273
NC_003888.3	RefSeq	CDS	6900898	6907356	.	-	0	ID=cds6215;Parent=gene6335;Dbxref=Genbank:NP_630372.1,GeneID:1101714;Name=NP_630372.1;Note=SC2C4.03c%2C probable type I polyketide synthase%2C len: 2152 aa%3B N-terminal domain almost identical to TR:Q9L8J0 (EMBL:AF202898) Streptomyces coelicolor A3(2) type I polyketide synthase (fragment)%2C 720 aa%3B fasta scores: opt: 4356 z-score: 4494.6 E(): 0%3B 93.8%25 identity in 721 aa overlap and C-terminal domain similar to SW:HETM_ANASP (EMBL:L22883) Anabaena sp. polyketide synthase HetM%2C 506 aa%3B blastp scores: Score%3D 761 (267.9 bits)%2C Expect%3D 2.2e-74%2C Sum P(2)%3D 2.2e-74%3B Identities%3D 184/491 (37%25)%2C Positives%3D 278/491 (56%25). Also highly similar%2C in this same cosmid%2C to the N-terminal region of SC2C4.04c and to SC2C4.05c. Contains Pfam matches to entries PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C PF00698 Acyl_transf%2C Acyl transferase domain and PF00550 pp-binding%2C Phosphopantetheine attachment site and matches to Prosite entries PS00606 Beta-ketoacyl synthases active site%2C PS00340 Growth factor and cytokines receptors family signature 2 and PS00012 Phosphopantetheine attachment site;gbkey=CDS;gene=SC2C4.03c;product=type I polyketide synthase;protein_id=NP_630372.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6902116	6902319	.	-	.	ID=id8199;Dbxref=GeneID:1101714;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 68.50%2C E-value 2.5e-17;gbkey=misc_feature;gene=SC2C4.03c
NC_003888.3	RefSeq	sequence_feature	6902194	6902241	.	-	.	ID=id8200;Dbxref=GeneID:1101714;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC2C4.03c
NC_003888.3	RefSeq	sequence_feature	6902632	6902652	.	-	.	ID=id8201;Dbxref=GeneID:1101714;Note=PS00340 Growth factor and cytokines receptors family signature 2;gbkey=misc_feature;gene=SC2C4.03c
NC_003888.3	RefSeq	sequence_feature	6904726	6905670	.	-	.	ID=id8202;Dbxref=GeneID:1101714;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 248.50%2C E-value 9.5e-71;gbkey=misc_feature;gene=SC2C4.03c
NC_003888.3	RefSeq	sequence_feature	6905980	6907251	.	-	.	ID=id8203;Dbxref=GeneID:1101714;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 801.60%2C E-value 2.8e-237;gbkey=misc_feature;gene=SC2C4.03c
NC_003888.3	RefSeq	sequence_feature	6906724	6906774	.	-	.	ID=id8204;Dbxref=GeneID:1101714;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=SC2C4.03c
NC_003888.3	RefSeq	gene	6907413	6918143	.	-	.	ID=gene6336;Dbxref=GeneID:1101715;Name=SC2C4.04c;gbkey=Gene;gene=SC2C4.04c;gene_biotype=protein_coding;gene_synonym=SC2C4.04c;locus_tag=SCO6274
NC_003888.3	RefSeq	CDS	6907413	6918143	.	-	0	ID=cds6216;Parent=gene6336;Dbxref=Genbank:NP_630373.1,GeneID:1101715;Name=NP_630373.1;Note=SC2C4.04c%2C probable type I polyketide synthase%2C len: 3576 aa%3B similar to TR:Q9ZGI4 (EMBL:AF079138) Streptomyces venezuelae type I polyketide synthase PikAII%2C 3739 aa%3B fasta scores: opt: 3355 z-score: 3346.1 E(): 0%3B 39.7%25 identity in 4066 aa overlap. Also highly similar%2C in this same cosmid%2C to SC2C4.03c and to SC2C4.05c.. Contains Pfam matches to entries 2x PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C 2x PF00698 Acyl_transf%2C Acyl transferase domain%2C 2x PF00550 pp-binding%2C Phosphopantetheine attachment site and matches to Prosite entries 2x PS00606 Beta-ketoacyl synthases active site%2C 2x PS00216 Sugar transport proteins signature 1%2C 2x PS00012 Phosphopantetheine attachment site and PS00173 Xylose isomerase signature 2. Also contains a possible coiled-coil region at the N-terminal domain at approx aa 1..25. Protein containing duplicate subunits such that the N-terminal region is equivalent to the C-terminal region;gbkey=CDS;gene=SC2C4.04c;product=type I polyketide synthase;protein_id=NP_630373.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6907680	6907883	.	-	.	ID=id8205;Dbxref=GeneID:1101715;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 54.80%2C E-value 1.6e-13;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6907758	6907805	.	-	.	ID=id8206;Dbxref=GeneID:1101715;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6909774	6909824	.	-	.	ID=id8207;Dbxref=GeneID:1101715;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6910212	6911156	.	-	.	ID=id8208;Dbxref=GeneID:1101715;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 248.50%2C E-value 9.5e-71;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6911484	6912761	.	-	.	ID=id8209;Dbxref=GeneID:1101715;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 843.10%2C E-value 9.2e-250;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6912228	6912278	.	-	.	ID=id8210;Dbxref=GeneID:1101715;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6912543	6912572	.	-	.	ID=id8211;Dbxref=GeneID:1101715;Note=PS00173 Xylose isomerase signature 2;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6912837	6913040	.	-	.	ID=id8212;Dbxref=GeneID:1101715;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 67.90%2C E-value 3.8e-17;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6912915	6912962	.	-	.	ID=id8213;Dbxref=GeneID:1101715;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6915021	6915071	.	-	.	ID=id8214;Dbxref=GeneID:1101715;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6915465	6916418	.	-	.	ID=id8215;Dbxref=GeneID:1101715;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 224.40%2C E-value 1.6e-63;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6916761	6918038	.	-	.	ID=id8216;Dbxref=GeneID:1101715;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 820.10%2C E-value 8e-243;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	sequence_feature	6917505	6917555	.	-	.	ID=id8217;Dbxref=GeneID:1101715;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=SC2C4.04c
NC_003888.3	RefSeq	ribosome_entry_site	6918154	6918157	.	-	.	ID=id8218;gbkey=RBS
NC_003888.3	RefSeq	gene	6918286	6931959	.	-	.	ID=gene6337;Dbxref=GeneID:1101716;Name=SC1G7.01c;gbkey=Gene;gene=SC1G7.01c;gene_biotype=protein_coding;gene_synonym=SC1G7.01c,SC2C4.05c;locus_tag=SCO6275
NC_003888.3	RefSeq	CDS	6918286	6931959	.	-	0	ID=cds6217;Parent=gene6337;Dbxref=Genbank:NP_733695.1,GeneID:1101716;Name=NP_733695.1;Note=SC1G7.01c%2C probable type I polyketide synthase (fragment)%2C len: >3488 aa%3B similar to the N-terminal region of TR:Q9L4W3 (EMBL:AF263912) Streptomyces noursei nystatin polyketide synthase NysC%2C 11096 aa%3B fasta scores: opt: 7454 Z-score: 6765.5 bits: 1268.6 E(): 0%3B 45.788%25 identity in 4285 aa overlap%2C to TR:O33956 (EMBL:U78289) Streptomyces fradiae tylactone synthase modules 4 %26 5 TylG%2C 3729 aa%3B fasta scores: opt: 3409 Z-score: 3092.3 bits: 587.4 E(): 1.2e-164%3B 44.860%25 identity in 2568 aa overlap and to TR:CAC22145 (EMBL:AL512902) Streptomyces coelicolor SC2C4.04c%2C 3577 aa%3B fasta scores: opt: 4872 Z-score: 3412.6 bits: 646.6 E(): 2.3e-184%3B 58.281%25 identity in 2560 aa overlap. Contains Pfam matches to entries 3x PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C 3x PF02801 ketoacyl-synt_C%2C Beta-ketoacyl synthase%2C 3x PF00698 Acyl_transf%2C Acyl transferase domain%2C PF00550 pp-binding%2C Phosphopantetheine attachment site%2C PF00550 pp-binding%2C Phosphopantetheine attachment site and matches to Prosite entries PS00012 Phosphopantetheine attachment site and PS00606 Beta-ketoacyl synthases active site~SC2C4.05c%2C probable type I polyketide synthase (fragment)%2C len: >1107 aa%3B similar to C-terminal region of TR:O33955 (EMBL:U78289) Streptomyces fradiae tylactone synthase module 3 TylG%2C 1864 aa%3B fasta scores: opt: 2105 z-score: 2202.2 E(): 0%3B 46.0%25 identity in 1161 aa overlap. Also highly similar%2C in this same cosmid%2C to SC2C4.03c and SC2C4.04c. Contains Pfam matches to entries PF00698 Acyl_transf%2C Acyl transferase domain and PF00550 pp-binding%2C Phosphopantetheine attachment site and matches to Prosite entries PS00216 Sugar transport proteins signature 1 and PS00012 Phosphopantetheine attachment site;gbkey=CDS;gene=SC1G7.01c;product=type I polyketide synthase;protein_id=NP_733695.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6918538	6918741	.	-	.	ID=id8219;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 68.80%2C E-value 2.1e-17;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6918616	6918663	.	-	.	ID=id8220;Dbxref=GeneID:1101716;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6920710	6920760	.	-	.	ID=id8221;Dbxref=GeneID:1101716;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6921142	6921609	.	-	.	ID=id8222;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score -119.50%2C E-value 0.0089;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6921496	6922110	.	-	.	ID=id8223;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 5.10%2C E-value 2.8e-10;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6922420	6922929	.	-	.	ID=id8224;Dbxref=GeneID:1101716;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2C Beta-ketoacyl synthase%2C score 346.10%2C E-value 3.8e-100;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6922951	6923706	.	-	.	ID=id8225;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 469.40%2C E-value 3e-137;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6923164	6923214	.	-	.	ID=id8226;Dbxref=GeneID:1101716;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6923776	6923979	.	-	.	ID=id8227;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 66.20%2C E-value 1.1e-16;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6923854	6923901	.	-	.	ID=id8228;Dbxref=GeneID:1101716;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6926353	6927321	.	-	.	ID=id8229;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 307.60%2C E-value 1.4e-88;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6927634	6928143	.	-	.	ID=id8230;Dbxref=GeneID:1101716;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2C Beta-ketoacyl synthase%2C score 328.60%2C E-value 7.1e-95;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6928165	6928917	.	-	.	ID=id8231;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 458.60%2C E-value 5.1e-134;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6928987	6929190	.	-	.	ID=id8232;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 55.10%2C E-value 1.3e-13;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6929401	6930324	.	-	.	ID=id8233;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 280.60%2C E-value 2e-80;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6930631	6931146	.	-	.	ID=id8234;Dbxref=GeneID:1101716;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2C Beta-ketoacyl synthase%2C score 274.60%2C E-value 1.3e-78;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	sequence_feature	6931168	6931908	.	-	.	ID=id8235;Dbxref=GeneID:1101716;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 353.40%2C E-value 2.5e-102;gbkey=misc_feature;gene=SC1G7.01c
NC_003888.3	RefSeq	ribosome_entry_site	6932268	6932273	.	+	.	ID=id8236;gbkey=RBS
NC_003888.3	RefSeq	gene	6932285	6933607	.	+	.	ID=gene6338;Dbxref=GeneID:1101717;Name=SC1G7.02;gbkey=Gene;gene=SC1G7.02;gene_biotype=protein_coding;gene_synonym=SC1G7.02;locus_tag=SCO6276
NC_003888.3	RefSeq	CDS	6932285	6933607	.	+	0	ID=cds6218;Parent=gene6338;Dbxref=Genbank:NP_630374.1,GeneID:1101717;Name=NP_630374.1;Note=SC1G7.02%2C possible hypothetical protein%2C len: 440 aa%3B similar to TR:Q9L0A8 (EMBL:AL163003) Streptomyces coelicolor hypothetical protein SCC24.09%2C 468 aa%3B fasta scores: opt: 777 Z-score: 867.4 bits: 169.7 E(): 1e-40%3B 36.303%25 identity in 449 aa overlap. Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SC1G7.02;product=hypothetical protein;protein_id=NP_630374.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6932786	6933400	.	+	.	ID=id8237;Dbxref=GeneID:1101717;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 4.10%2C E-value 3.3e-05;gbkey=misc_feature;gene=SC1G7.02
NC_003888.3	RefSeq	ribosome_entry_site	6933593	6933596	.	+	.	ID=id8238;Dbxref=GeneID:1101717;gbkey=RBS;gene=SC1G7.02
NC_003888.3	RefSeq	gene	6933604	6934464	.	+	.	ID=gene6339;Dbxref=GeneID:1101718;Name=SC1G7.03;gbkey=Gene;gene=SC1G7.03;gene_biotype=protein_coding;gene_synonym=SC1G7.03;locus_tag=SCO6277
NC_003888.3	RefSeq	CDS	6933604	6934464	.	+	0	ID=cds6219;Parent=gene6339;Dbxref=Genbank:NP_630375.1,GeneID:1101718;Name=NP_630375.1;Note=SC1G7.03%2C possible epoxide hydrolase%2C len: 286 aa%3B similar to TR:Q42566 (EMBL:D16628) Arabidopsis thaliana epoxide hydrolase (EC 3.3.2.3) Seh or F18A8.11%2C 321 aa%3B fasta scores: opt: 351 Z-score: 406.4 bits: 83.3 E(): 4.8e-15%3B 29.560%25 identity in 318 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SC1G7.03;product=epoxide hydrolase;protein_id=NP_630375.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6933754	6934440	.	+	.	ID=id8239;Dbxref=GeneID:1101718;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 74.20%2C E-value 2.7e-18;gbkey=misc_feature;gene=SC1G7.03
NC_003888.3	RefSeq	ribosome_entry_site	6934497	6934500	.	+	.	ID=id8240;gbkey=RBS
NC_003888.3	RefSeq	gene	6934507	6936138	.	+	.	ID=gene6340;Dbxref=GeneID:1101719;Name=SC1G7.04;gbkey=Gene;gene=SC1G7.04;gene_biotype=protein_coding;gene_synonym=SC1G7.04;locus_tag=SCO6278
NC_003888.3	RefSeq	CDS	6934507	6936138	.	+	0	ID=cds6220;Parent=gene6340;Dbxref=Genbank:NP_630376.1,GeneID:1101719;Name=NP_630376.1;Note=SC1G7.04%2C possible integral membrane transport protein%2C len: 543 aa%3B similar to TR:Q9RMF9 (EMBL:AF201913) Streptomyces globisporus transmembrane membrane efflux protein SgcB%2C 521 aa%3B fasta scores: opt: 1451 Z-score: 1413.5 bits: 271.2 E(): 3.8e-71%3B 46.243%25 identity in 519 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC1G7.04;product=integral membrane transport protein;protein_id=NP_630376.1;transl_table=11
NC_003888.3	RefSeq	gene	6936149	6937705	.	+	.	ID=gene6341;Dbxref=GeneID:1101720;Name=SC1G7.05;gbkey=Gene;gene=SC1G7.05;gene_biotype=protein_coding;gene_synonym=SC1G7.05;locus_tag=SCO6279
NC_003888.3	RefSeq	CDS	6936149	6937705	.	+	0	ID=cds6221;Parent=gene6341;Dbxref=Genbank:NP_630377.1,GeneID:1101720;Name=NP_630377.1;Note=SC1G7.05%2C probable diaminobutyrate-pyruvate aminotransferase%2C len: 518 aa%3B similar to SW:RHSA_RHIME (EMBL:AF110737) Rhizobium meliloti diaminobutyrate-pyruvate aminotransferase (EC 2.6.1.76) RhsA%2C 470 aa%3B fasta scores: opt: 423 Z-score: 464.1 bits: 95.4 E(): 2.9e-18%3B 30.704%25 identity in 469 aa overlap. Contains 2x Pfam matches to entry PF00202 aminotran_3%2C Aminotransferase class-III pyridoxal-phosphate;gbkey=CDS;gene=SC1G7.05;product=diaminobutyrate-pyruvate aminotransferase;protein_id=NP_630377.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6936248	6936544	.	+	.	ID=id8241;Dbxref=GeneID:1101720;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferase class-III pyridoxal-phosphate%2C score 62.50%2C E-value 3.7e-21;gbkey=misc_feature;gene=SC1G7.05
NC_003888.3	RefSeq	sequence_feature	6936728	6937456	.	+	.	ID=id8242;Dbxref=GeneID:1101720;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferase class-III pyridoxal-phosphate%2C score 117.50%2C E-value 2.6e-40;gbkey=misc_feature;gene=SC1G7.05
NC_003888.3	RefSeq	ribosome_entry_site	6938006	6938009	.	+	.	ID=id8243;gbkey=RBS
NC_003888.3	RefSeq	gene	6938012	6939643	.	+	.	ID=gene6342;Dbxref=GeneID:1101721;Name=SC1G7.06;gbkey=Gene;gene=SC1G7.06;gene_biotype=protein_coding;gene_synonym=SC1G7.06;locus_tag=SCO6280
NC_003888.3	RefSeq	CDS	6938012	6939643	.	+	0	ID=cds6222;Parent=gene6342;Dbxref=Genbank:NP_630378.1,GeneID:1101721;Name=NP_630378.1;Note=SC1G7.06%2C possible regulatory protein%2C len: 543 aa%3B similar to TR:Q54494 (EMBL:AJ224512) Streptomyces nogalater nogalamycin biosynthesis activator SnoA%2C 665 aa%3B fasta scores: opt: 542 Z-score: 521.9 bits: 106.6 E(): 1.8e-21%3B 32.919%25 identity in 483 aa overlap;gbkey=CDS;gene=SC1G7.06;product=regulatory protein;protein_id=NP_630378.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6939893	6939899	.	+	.	ID=id8244;gbkey=RBS
NC_003888.3	RefSeq	gene	6939907	6941544	.	+	.	ID=gene6343;Dbxref=GeneID:1101722;Name=SC1G7.07;gbkey=Gene;gene=SC1G7.07;gene_biotype=protein_coding;gene_synonym=SC1G7.07;locus_tag=SCO6281
NC_003888.3	RefSeq	CDS	6939907	6941544	.	+	0	ID=cds6223;Parent=gene6343;Dbxref=Genbank:NP_630379.1,GeneID:1101722;Name=NP_630379.1;Note=SC1G7.07%2C probable FAD-binding protein%2C len: 545 aa%3B similar to TR:AAG23271 (EMBL:AY007564) Saccharopolyspora spinosa  oxidoreductase SpnJ%2C 539 aa%3B fasta scores: opt: 1599 Z-score: 1759.4 bits: 335.3 E(): 2.1e-90%3B 45.785%25 identity in 522 aa overlap and to TR:Q9EX55 (EMBL:AL512902) Streptomyces coelicolor  FAD-binding protein SC2C4.02%2C 550 aa%3B fasta scores: opt: 2105 Z-score: 2315.4 bits: 438.2 E(): 2.2e-121%3B 56.884%25 identity in 552 aa overlap. Contains Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain;gbkey=CDS;gene=SC1G7.07;product=FAD-binding protein;protein_id=NP_630379.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6940018	6940632	.	+	.	ID=id8245;Dbxref=GeneID:1101722;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score -7.80%2C E-value 2.8e-05;gbkey=misc_feature;gene=SC1G7.07
NC_003888.3	RefSeq	gene	6941746	6942543	.	-	.	ID=gene6344;Dbxref=GeneID:1101723;Name=SC1G7.08c;gbkey=Gene;gene=SC1G7.08c;gene_biotype=protein_coding;gene_synonym=SC1G7.08c;locus_tag=SCO6282
NC_003888.3	RefSeq	CDS	6941746	6942543	.	-	0	ID=cds6224;Parent=gene6344;Dbxref=Genbank:NP_630380.1,GeneID:1101723;Name=NP_630380.1;Note=SC1G7.08c%2C probable 3-oxoacyl-[acyl-carrier protein] reductase%2C len: 265 aa%3B similar to SW:FABG_BACSU (EMBL:U59433) Bacillus subtilis 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) FabG%2C 246 aa%3B fasta scores: opt: 531 Z-score: 586.7 bits: 116.1 E(): 4.3e-25%3B 41.036%25 identity in 251 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SC1G7.08c;product=3-oxoacyl-ACP reductase;protein_id=NP_630380.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6941773	6941865	.	-	.	ID=id8246;Dbxref=GeneID:1101723;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 49.30%2C E-value 2.4e-12;gbkey=misc_feature;gene=SC1G7.08c
NC_003888.3	RefSeq	sequence_feature	6941926	6942498	.	-	.	ID=id8247;Dbxref=GeneID:1101723;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 201.90%2C E-value 9.8e-57;gbkey=misc_feature;gene=SC1G7.08c
NC_003888.3	RefSeq	sequence_feature	6941989	6942075	.	-	.	ID=id8248;Dbxref=GeneID:1101723;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC1G7.08c
NC_003888.3	RefSeq	gene	6942661	6943506	.	+	.	ID=gene6345;Dbxref=GeneID:1101724;Name=SC1G7.09;gbkey=Gene;gene=SC1G7.09;gene_biotype=protein_coding;gene_synonym=SC1G7.09;locus_tag=SCO6283
NC_003888.3	RefSeq	CDS	6942661	6943506	.	+	0	ID=cds6225;Parent=gene6345;Dbxref=Genbank:NP_630381.1,GeneID:1101724;Name=NP_630381.1;Note=SC1G7.09%2C conserved hypothetical protein%2C len: 281 aa%3B similar to TR:Q9RDJ2 (EMBL:AL136519) Streptomyces coelicolor hypothetical 29.0 kDa protein SCC57A.04c%2C 279 aa%3B fasta scores: opt: 648 Z-score: 723.6 bits: 141.7 E(): 1e-32%3B 44.912%25 identity in 285 aa overlap and to TR:O68920 (EMBL:AF058302) Streptomyces roseofulvus hypothetical protein FrnS%2C 305 aa%3B fasta scores: opt: 330 Z-score: 372.5 bits: 76.9 E(): 3.7e-13%3B 34.708%25 identity in 291 aa overlap;gbkey=CDS;gene=SC1G7.09;product=hypothetical protein;protein_id=NP_630381.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6943661	6943667	.	+	.	ID=id8249;gbkey=RBS
NC_003888.3	RefSeq	gene	6943673	6945265	.	+	.	ID=gene6346;Dbxref=GeneID:1101725;Name=SC1G7.10;gbkey=Gene;gene=SC1G7.10;gene_biotype=protein_coding;gene_synonym=SC1G7.10;locus_tag=SCO6284
NC_003888.3	RefSeq	CDS	6943673	6945265	.	+	0	ID=cds6226;Parent=gene6346;Dbxref=Genbank:NP_630382.1,GeneID:1101725;Name=NP_630382.1;Note=SC1G7.10%2C probable decarboxylase%2C len: 530 aa%3B similar to TR:AAK06793 (EMBL:AF324838) Streptomyces antibioticus simocyclinone biosynthesis decarboxylase involved in polyketide formation SimA12%2C 528 aa%3B fasta scores: opt: 2751 Z-score: 3055.0 bits: 574.9 E(): 1.4e-162%3B 75.803%25 identity in 529 aa overlap and to TR:O86517 (EMBL:AL031124) Streptomyces coelicolor carboyl transferase SC1C2.16%2C 527 aa%3B fasta scores: opt: 2715 Z-score: 3015.0 bits: 567.6 E(): 2.4e-160%3B 75.094%25 identity in 530 aa overlap. Contains Pfam match to entry PF01039 Carboxyl_trans%2C Carboxyl transferase domain;gbkey=CDS;gene=SC1G7.10;product=decarboxylase;protein_id=NP_630382.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6943754	6945256	.	+	.	ID=id8250;Dbxref=GeneID:1101725;Note=Pfam match to entry PF01039 Carboxyl_trans%2C Carboxyl transferase domain%2C score 926.10%2C E-value 1e-274;gbkey=misc_feature;gene=SC1G7.10
NC_003888.3	RefSeq	ribosome_entry_site	6945270	6945275	.	+	.	ID=id8251;gbkey=RBS
NC_003888.3	RefSeq	gene	6945280	6945543	.	+	.	ID=gene6347;Dbxref=GeneID:1101726;Name=SC1G7.11;gbkey=Gene;gene=SC1G7.11;gene_biotype=protein_coding;gene_synonym=SC1G7.11;locus_tag=SCO6285
NC_003888.3	RefSeq	CDS	6945280	6945543	.	+	0	ID=cds6227;Parent=gene6347;Dbxref=Genbank:NP_630383.1,GeneID:1101726;Name=NP_630383.1;Note=SC1G7.11%2C unknown%2C len: 87 aa. High content in alanine%2C arginine and serine amino acid residues;gbkey=CDS;gene=SC1G7.11;product=hypothetical protein;protein_id=NP_630383.1;transl_table=11
NC_003888.3	RefSeq	gene	6945705	6946379	.	-	.	ID=gene6348;Dbxref=GeneID:1101727;Name=SC1G7.12c;gbkey=Gene;gene=SC1G7.12c;gene_biotype=protein_coding;gene_synonym=SC1G7.12c;locus_tag=SCO6286
NC_003888.3	RefSeq	CDS	6945705	6946379	.	-	0	ID=cds6228;Parent=gene6348;Dbxref=Genbank:NP_630384.1,GeneID:1101727;Name=NP_630384.1;Note=SC1G7.12c%2C possible regulatory protein%2C len: 24 aa%3B similar to TR:O24739 (EMBL:AB001609) Streptomyces virginiae butyrolactone autoregulator receptor protein BarB%2C 216 aa%3B fasta scores: opt: 565 Z-score: 645.4 bits: 126.6 E(): 2.3e-28%3B 48.980%25 identity in 196 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins;gbkey=CDS;gene=SC1G7.12c;product=regulatory protein;protein_id=NP_630384.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6945871	6947688	.	+	.	ID=id8252;Note=previously sequenced DNA fragment. EMBL:AF109727 Streptomyces coelicolor A3(2) thioesterase II (scoT) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	6946200	6946340	.	-	.	ID=id8253;Dbxref=GeneID:1101727;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 54.10%2C E-value 2.1e-12;gbkey=misc_feature;gene=SC1G7.12c
NC_003888.3	RefSeq	gene	6946617	6947423	.	+	.	ID=gene6349;Dbxref=GeneID:1101728;Name=SC1G7.13;gbkey=Gene;gene=SC1G7.13;gene_biotype=protein_coding;gene_synonym=SC1G7.13,scoT;locus_tag=SCO6287
NC_003888.3	RefSeq	CDS	6946617	6947423	.	+	0	ID=cds6229;Parent=gene6349;Dbxref=Genbank:NP_630385.1,GeneID:1101728;Name=NP_630385.1;Note=SC1G7.13%2C scoT thioesterase II%2C len: 268 aa%3B identical to previously sequenced TR:AAF43096 (EMBL:AF109727) Streptomyces coelicolor A3(2) thioesterase II ScoT%2C 268 aa. Contains Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain;gbkey=CDS;gene=SC1G7.13;product=thioesterase II;protein_id=NP_630385.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6946665	6947342	.	+	.	ID=id8254;Dbxref=GeneID:1101728;Note=Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain%2C score 212.70%2C E-value 5.5e-60;gbkey=misc_feature;gene=SC1G7.13
NC_003888.3	RefSeq	sequence_feature	6947568	6947688	.	+	.	ID=id8255;Note=previously sequenced DNA fragment. EMBL: AF109727 Streptomyces coelicolor A3(2) thioesterase II (scoT) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6947584	6948414	.	+	.	ID=gene6350;Dbxref=GeneID:1101729;Name=SC1G7.14;gbkey=Gene;gene=SC1G7.14;gene_biotype=protein_coding;gene_synonym=SC1G7.14,SCBAC8D1.01;locus_tag=SCO6288
NC_003888.3	RefSeq	CDS	6947584	6948414	.	+	0	ID=cds6230;Parent=gene6350;Dbxref=Genbank:NP_630386.1,GeneID:1101729;Name=NP_630386.1;Note=SCBAC8D1.01%2C probable regulatory protein%2C len: 276 aa%3B similar to SW:AC24_STRCO (EMBL:M64683) Streptomyces coelicolor probable actinorhodin operon activatory protein actII-4%2C 255 aa%3B fasta scores: opt: 707 Z-score: 815.0 bits: 158.5 E(): 8.3e-38%3B 45.306%25 identity in 245 aa overlap~SC1G7.14%2C possible regulatory protein (fragment)%2C len: >35 aa%3B similar to TR:Q54494 (EMBL:AJ224512) Streptomyces nogalater activator SnoA%2C 665 aa%3B fasta scores: opt: 86 Z-score: 144.4 bits: 32.8 E(): 1.9%3B 45.455%25 identity in 33 aa overlap;gbkey=CDS;gene=SC1G7.14;product=regulatory protein;protein_id=NP_630386.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6948578	6948583	.	+	.	ID=id8256;gbkey=RBS
NC_003888.3	RefSeq	gene	6948589	6949758	.	+	.	ID=gene6351;Dbxref=GeneID:1101730;Name=SCBAC8D1.02;gbkey=Gene;gene=SCBAC8D1.02;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.02;locus_tag=SCO6289
NC_003888.3	RefSeq	CDS	6948589	6949758	.	+	0	ID=cds6231;Parent=gene6351;Dbxref=Genbank:NP_630387.1,GeneID:1101730;Name=NP_630387.1;Note=SCBAC8D1.02%2C probable  oxidoreductase%2C len: 389 aa%3B similar to TR:Q9S2N6 (EMBL:AL109661) Streptomyces coelicolor  oxidoreductase (fragment) SC6E10.01%2C 375 aa%3B fasta scores: opt: 440 Z-score: 452.7 bits: 92.5 E(): 1.3e-17%3B 31.980%25 identity in 394 aa overlap. Contains Pfam match to entry PF01266 DAO%2C D-amino acid oxidase and matches to Prosite entries PS00013 Prokaryotic membrane lipoprotein lipid attachment site and PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=CDS;gene=SCBAC8D1.02;product=oxidoreductase;protein_id=NP_630387.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6948595	6949689	.	+	.	ID=id8257;Dbxref=GeneID:1101730;Note=Pfam match to entry PF01266 DAO%2C D-amino acid oxidase%2C score -38.20%2C E-value 1.4e-05;gbkey=misc_feature;gene=SCBAC8D1.02
NC_003888.3	RefSeq	sequence_feature	6948607	6948639	.	+	.	ID=id8258;Dbxref=GeneID:1101730;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCBAC8D1.02
NC_003888.3	RefSeq	sequence_feature	6949603	6949647	.	+	.	ID=id8259;Dbxref=GeneID:1101730;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=SCBAC8D1.02
NC_003888.3	RefSeq	ribosome_entry_site	6949741	6949747	.	+	.	ID=id8260;Dbxref=GeneID:1101730;gbkey=RBS;gene=SCBAC8D1.02
NC_003888.3	RefSeq	gene	6949755	6950009	.	+	.	ID=gene6352;Dbxref=GeneID:1101731;Name=SCBAC8D1.03;gbkey=Gene;gene=SCBAC8D1.03;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.03;locus_tag=SCO6290
NC_003888.3	RefSeq	CDS	6949755	6950009	.	+	0	ID=cds6232;Parent=gene6352;Dbxref=Genbank:NP_630388.1,GeneID:1101731;Name=NP_630388.1;Note=SCBAC8D1.03%2C hypothetical protein%2C len: 84 aa%3B highly similar to N-terminal part of SW:SOXA_RHIME (EMBL:AF055582) Rhizobium meliloti sarcosine oxidase alpha subunit (EC 1.5.3.1) SoxA%2C 987 aa%3B fasta scores: opt: 132 Z-score: 169.8 bits: 39.3 E(): 0.072l%3B 42.373%25 identity in 59 aa overlap. Contains Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains;gbkey=CDS;gene=SCBAC8D1.03;product=hypothetical protein;protein_id=NP_630388.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6949758	6949970	.	+	.	ID=id8261;Dbxref=GeneID:1101731;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 8.40%2C E-value 1;gbkey=misc_feature;gene=SCBAC8D1.03
NC_003888.3	RefSeq	gene	6950002	6951537	.	+	.	ID=gene6353;Dbxref=GeneID:1101732;Name=SCBAC8D1.04;gbkey=Gene;gene=SCBAC8D1.04;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.04;locus_tag=SCO6291
NC_003888.3	RefSeq	CDS	6950002	6951537	.	+	0	ID=cds6233;Parent=gene6353;Dbxref=Genbank:NP_630389.1,GeneID:1101732;Name=NP_630389.1;Note=SCBAC8D1.04%2C probable  oxidase%2C len: 511 aa%3B similar to SW:OOXA_RHIME (EMBL:U66830) Rhizobium meliloti opine oxidase subunit A (EC 1.*.*.*) OxaA%2C 526 aa%3B fasta scores: opt: 519 Z-score: 515.9 bits: 105.1 E(): 3.8e-21%3B 31.638%25 identity in 531 aa overlap. Contains 3x degenerate repeat: ASPVSA;gbkey=CDS;gene=SCBAC8D1.04;product=oxidase;protein_id=NP_630389.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	6951433	6951486	.	+	.	ID=id8262;Dbxref=GeneID:1101732;Note=3x degenerate repeat translated in SCBAC8D1.03;gbkey=repeat_region;gene=SCBAC8D1.04
NC_003888.3	RefSeq	ribosome_entry_site	6951523	6951528	.	+	.	ID=id8263;Dbxref=GeneID:1101732;gbkey=RBS;gene=SCBAC8D1.04
NC_003888.3	RefSeq	gene	6951534	6952430	.	+	.	ID=gene6354;Dbxref=GeneID:1101733;Name=SCBAC8D1.05;gbkey=Gene;gene=SCBAC8D1.05;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.05;locus_tag=SCO6292
NC_003888.3	RefSeq	CDS	6951534	6952430	.	+	0	ID=cds6234;Parent=gene6354;Dbxref=Genbank:NP_630390.1,GeneID:1101733;Name=NP_630390.1;Note=SCBAC8D1.05%2C probable dihydropicolinate synthase%2C len: 298 aa%3B similar to SW:DAPA_RHIME (EMBL:AJ222715) Rhizobium meliloti dihydropicolinate synthase (EC 4.2.1.52) DapA%2C 300 aa%3B fasta scores: opt: 410 Z-score: 478.8 bits: 96.6 E(): 4.4e-19%3B 31.034%25 identity in 290 aa overlap. Contains Pfam match to entry PF00701 DHDPS%2C Dihydrodipicolinate synthetase family;gbkey=CDS;gene=SCBAC8D1.05;product=dihydropicolinate synthase;protein_id=NP_630390.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6951552	6952412	.	+	.	ID=id8264;Dbxref=GeneID:1101733;Note=Pfam match to entry PF00701 DHDPS%2C Dihydrodipicolinate synthetase family%2C score 85.90%2C E-value 8e-22;gbkey=misc_feature;gene=SCBAC8D1.05
NC_003888.3	RefSeq	gene	6952433	6953434	.	+	.	ID=gene6355;Dbxref=GeneID:1101734;Name=SCBAC8D1.06;gbkey=Gene;gene=SCBAC8D1.06;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.06;locus_tag=SCO6293
NC_003888.3	RefSeq	CDS	6952433	6953434	.	+	0	ID=cds6235;Parent=gene6355;Dbxref=Genbank:NP_630391.1,GeneID:1101734;Name=NP_630391.1;Note=SCBAC8D1.06%2C conserved hypothetical protein%2C len: 333 aa%3B similar to TR:Q9I489 (EMBL:AE004555) Pseudomonas aeruginosa hypothetical protein PA1255%2C 344 aa%3B fasta scores: opt: 872 Z-score: 981.3 bits: 190.0 E(): 4.5e-47%3B 41.964%25 identity in 336 aa overlap and to TR:Q98F20 (EMBL:AP003003) Rhizobium loti proline racemase MLL3979%2C 333 aa%3B fasta scores: opt: 985 Z-score: 1108.1 E(): 4.4e-54%3B 46.951%25 identity in 328 aa overlap;gbkey=CDS;gene=SCBAC8D1.06;product=hypothetical protein;protein_id=NP_630391.1;transl_table=11
NC_003888.3	RefSeq	gene	6953679	6954470	.	-	.	ID=gene6356;Dbxref=GeneID:1101735;Name=SCBAC8D1.07c;gbkey=Gene;gene=SCBAC8D1.07c;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.07c;locus_tag=SCO6294
NC_003888.3	RefSeq	CDS	6953679	6954470	.	-	0	ID=cds6236;Parent=gene6356;Dbxref=Genbank:NP_630392.1,GeneID:1101735;Name=NP_630392.1;Note=SCBAC8D1.07c%2C possible gntR-family regulatory protein%2C len: 263 aa%3B similar to TR:Q9ZBS9 (EMBL:AL034446) Streptomyces coelicolor gntR-family transcriptional regulator SC1A9.23%2C 273 aa%3B fasta scores: opt: 575 Z-score: 630.3 bits: 124.3 E(): 1.6e-27%3B 47.945%25 identity in 219 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family;gbkey=CDS;gene=SCBAC8D1.07c;product=GntR family transcriptional regulator;protein_id=NP_630392.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6954126	6954302	.	-	.	ID=id8265;Dbxref=GeneID:1101735;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 43.40%2C E-value 7.6e-12;gbkey=misc_feature;gene=SCBAC8D1.07c
NC_003888.3	RefSeq	ribosome_entry_site	6954476	6954479	.	-	.	ID=id8266;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6954605	6954610	.	+	.	ID=id8267;gbkey=RBS
NC_003888.3	RefSeq	gene	6954616	6956604	.	+	.	ID=gene6357;Dbxref=GeneID:1101736;Name=SCBAC8D1.08;gbkey=Gene;gene=SCBAC8D1.08;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.08;locus_tag=SCO6295
NC_003888.3	RefSeq	CDS	6954616	6956604	.	+	0	ID=cds6237;Parent=gene6357;Dbxref=Genbank:NP_630393.1,GeneID:1101736;Name=NP_630393.1;Note=SCBAC8D1.08%2C possible ABC transporter ATP-binding protein%2C len: 662 aa%3B similar to TR:Q9KKV4 (EMBL:AE004426) Vibrio cholerae ABC transporter ATP-binding protein VCA0996%2C 619 aa%3B fasta scores: opt: 1081 Z-score: 1044.0 bits: 203.4 E(): 1.4e-50%3B 35.859%25 identity in 594 aa overlap. Contains Pfam matches to entries PF00664 ABC_membrane%2C ABC transporter transmembrane region and PF00005 ABC_tran%2C ABC transporter and matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop)%2C PS00211 ABC transporters family signature and PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2. Also contains 2x degenerate repeat: VDGDGRDDGDGR(D/R)D and possible hydrophobic membrane spanning regions at N-terminal domain;gbkey=CDS;gene=SCBAC8D1.08;product=ABC transporter ATP-binding protein;protein_id=NP_630393.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6954715	6955566	.	+	.	ID=id8268;Dbxref=GeneID:1101736;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 7.10%2C E-value 0.0025;gbkey=misc_feature;gene=SCBAC8D1.08
NC_003888.3	RefSeq	sequence_feature	6955750	6956304	.	+	.	ID=id8269;Dbxref=GeneID:1101736;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 190.70%2C E-value 2.4e-53;gbkey=misc_feature;gene=SCBAC8D1.08
NC_003888.3	RefSeq	sequence_feature	6955771	6955794	.	+	.	ID=id8270;Dbxref=GeneID:1101736;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC8D1.08
NC_003888.3	RefSeq	sequence_feature	6956083	6956127	.	+	.	ID=id8271;Dbxref=GeneID:1101736;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SCBAC8D1.08
NC_003888.3	RefSeq	repeat_region	6956416	6956508	.	+	.	ID=id8272;Dbxref=GeneID:1101736;Note=2x degenerate repeat unit translated in SCBAC8D1.08;gbkey=repeat_region;gene=SCBAC8D1.08
NC_003888.3	RefSeq	gene	6956543	6957022	.	-	.	ID=gene6358;Dbxref=GeneID:1101737;Name=SCBAC8D1.09c;gbkey=Gene;gene=SCBAC8D1.09c;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.09c;locus_tag=SCO6296
NC_003888.3	RefSeq	CDS	6956543	6957022	.	-	0	ID=cds6238;Parent=gene6358;Dbxref=Genbank:NP_630394.1,GeneID:1101737;Name=NP_630394.1;Note=SCBAC8D1.09c%2C conserved hypothetical protein%2C len: 159 aa%3B similar to TR:Q9HTH9 (EMBL:AE004951) Pseudomonas aeruginosa hypothetical protein PA5385%2C 159 aa%3B fasta scores: opt: 363 Z-score: 448.1 bits: 89.1 E(): 2.3e-17%3B 40.764%25 identity in 157 aa overlap;gbkey=CDS;gene=SCBAC8D1.09c;product=hypothetical protein;protein_id=NP_630394.1;transl_table=11
NC_003888.3	RefSeq	gene	6957019	6957975	.	-	.	ID=gene6359;Dbxref=GeneID:1101738;Name=SCBAC8D1.10c;gbkey=Gene;gene=SCBAC8D1.10c;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.10c;locus_tag=SCO6297
NC_003888.3	RefSeq	CDS	6957019	6957975	.	-	0	ID=cds6239;Parent=gene6359;Dbxref=Genbank:NP_630395.1,GeneID:1101738;Name=NP_630395.1;Note=SCBAC8D1.10c%2C probable 3-hydroxyacyl-CoA dehydrogenase%2C len: 318 aa%3B similar to TR:Q9HTH8 (EMBL:AE004951) Pseudomonas aeruginosa probable 3-hydroxyacyl-CoA dehydrogenase PA5386%2C 321 aa%3B fasta scores: opt: 1055 Z-score: 1152.5 bits: 221.5 E(): 1.3e-56%3B 54.072%25 identity in 307 aa overlap. Contains Pfam matches to entries PF02737 3HCDH_N%2C 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain and Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain;gbkey=CDS;gene=SCBAC8D1.10c;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=NP_630395.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6957030	6957035	.	-	.	ID=id8273;Dbxref=GeneID:1101738;gbkey=RBS;gene=SCBAC8D1.10c
NC_003888.3	RefSeq	sequence_feature	6957148	6957414	.	-	.	ID=id8274;Dbxref=GeneID:1101738;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain%2C score -5.90%2C E-value 0.026;gbkey=misc_feature;gene=SCBAC8D1.10c
NC_003888.3	RefSeq	sequence_feature	6957421	6957966	.	-	.	ID=id8275;Dbxref=GeneID:1101738;Note=Pfam match to entry PF02737 3HCDH_N%2C 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain%2C score 71.00%2C E-value 2.5e-17;gbkey=misc_feature;gene=SCBAC8D1.10c
NC_003888.3	RefSeq	gene	6957972	6958898	.	-	.	ID=gene6360;Dbxref=GeneID:1101739;Name=SCBAC8D1.11c;gbkey=Gene;gene=SCBAC8D1.11c;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.11c;locus_tag=SCO6298
NC_003888.3	RefSeq	CDS	6957972	6958898	.	-	0	ID=cds6240;Parent=gene6360;Dbxref=Genbank:NP_630396.1,GeneID:1101739;Name=NP_630396.1;Note=SCBAC8D1.11c%2C conserved hypothetical protein%2C len: 308 aa%3B similar to TR:Q9HTH7 (EMBL:AE004951) Pseudomonas aeruginosa hypothetical protein PA5387%2C 294 aa%3B fasta scores: opt: 1301 Z-score: 1431.2 bits: 272.9 E(): 3.9e-72%3B 64.746%25 identity in 295 aa overlap;gbkey=CDS;gene=SCBAC8D1.11c;product=hypothetical protein;protein_id=NP_630396.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6957984	6957989	.	-	.	ID=id8276;Dbxref=GeneID:1101739;gbkey=RBS;gene=SCBAC8D1.11c
NC_003888.3	RefSeq	ribosome_entry_site	6958906	6958910	.	-	.	ID=id8277;gbkey=RBS
NC_003888.3	RefSeq	gene	6958987	6959844	.	-	.	ID=gene6361;Dbxref=GeneID:1101740;Name=SCBAC8D1.12;gbkey=Gene;gene=SCBAC8D1.12;gene_biotype=protein_coding;gene_synonym=SCBAC8D1.12,SCIF3.01c;locus_tag=SCO6299
NC_003888.3	RefSeq	CDS	6958987	6959844	.	-	0	ID=cds6241;Parent=gene6361;Dbxref=Genbank:NP_733696.1,GeneID:1101740;Name=NP_733696.1;Note=SCIF3.01c%2C probable tetR-family transcriptional regulator%2C len: >248 aa%3B similar to TR:Q9XDV7 (EMBL:AB023642) Streptomyces griseus DNA-binding protein ORF2%2C 289 aa%3B fasta scores: opt: 847 z-score: 994.6 E(): 0%3B 65.3%25 identity in 245 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 28..49 (+3.30 SD)~SCBAC8D1.12c%2C possible DNA-binding protein (fragment)%2C len: >72 aa%3B similar to TR:Q9XDV7 (EMBL:AB023642) Streptomyces griseus DNA-binding protein ORF2%2C 289 aa%3B fasta scores: opt: 247 Z-score: 319.9 bits: 65.1 E(): 3.1e-10%3B 60.274%25 identity in 73 aa overlap;gbkey=CDS;gene=SCBAC8D1.12;product=TetR family transcriptional regulator;protein_id=NP_733696.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6959416	6959556	.	-	.	ID=id8278;Dbxref=GeneID:1101740;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 58.10%2C E-value 1.8e-13;gbkey=misc_feature;gene=SCBAC8D1.12
NC_003888.3	RefSeq	gene	6959963	6961810	.	-	.	ID=gene6362;Dbxref=GeneID:1101741;Name=SCIF3.02c;gbkey=Gene;gene=SCIF3.02c;gene_biotype=protein_coding;gene_synonym=SCIF3.02c;locus_tag=SCO6300
NC_003888.3	RefSeq	CDS	6959963	6961810	.	-	0	ID=cds6242;Parent=gene6362;Dbxref=Genbank:NP_630397.1,GeneID:1101741;Name=NP_630397.1;Note=SCIF3.02c%2C probable  hydrolase%2C len: 615 aa%3B similar to SW:HEXA_ALTSO (EMBL:D17399) Alteromonas sp. beta-hexosaminidase A precursor (EC 3.2.1.52) Cht60%2C 598 aa%3B fasta scores: opt: 565 z-score: 617.5 E(): 7.4e-27%3B 33.8%25 identity in 550 aa overlap and to TR:Q9RDG9 (EMBL:AL136519) Streptomyces coelicolor beta-N-acetylglucosaminidase NagA%2C 615 aa%3B fasta scores: opt: 2497 z-score: 2289.5 E(): 0%3B 65.6%25 identity in 605 aa overlap. Contains Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain and PF01915 Glyco_hydro_3_C%2C Glycosyl hydrolase family 3 C terminal domain and match to Prosite entry PS00775 Glycosyl hydrolases family 3 active site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCIF3.02c;product=hydrolase;protein_id=NP_630397.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6960122	6960568	.	-	.	ID=id8279;Dbxref=GeneID:1101741;Note=Pfam match to entry PF01915 Glyco_hydro_3_C%2C Glycosyl hydrolase family 3 C terminal domain%2C score 40.90%2C E-value 2.9e-08;gbkey=misc_feature;gene=SCIF3.02c
NC_003888.3	RefSeq	sequence_feature	6960680	6961690	.	-	.	ID=id8280;Dbxref=GeneID:1101741;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain%2C score 321.40%2C E-value 1e-92;gbkey=misc_feature;gene=SCIF3.02c
NC_003888.3	RefSeq	sequence_feature	6960815	6960868	.	-	.	ID=id8281;Dbxref=GeneID:1101741;Note=PS00775 Glycosyl hydrolases family 3 active site;gbkey=misc_feature;gene=SCIF3.02c
NC_003888.3	RefSeq	ribosome_entry_site	6961820	6961825	.	-	.	ID=id8282;gbkey=RBS
NC_003888.3	RefSeq	gene	6961931	6962080	.	-	.	ID=gene6363;Dbxref=GeneID:1101742;Name=SCIF3.03c;gbkey=Gene;gene=SCIF3.03c;gene_biotype=protein_coding;gene_synonym=SCIF3.03c;locus_tag=SCO6301
NC_003888.3	RefSeq	CDS	6961931	6962080	.	-	0	ID=cds6243;Parent=gene6363;Dbxref=Genbank:NP_630398.1,GeneID:1101742;Name=NP_630398.1;Note=SCIF3.03c%2C similar to part of TR:Q9K447 (EMBL:AL359216) Streptomyces coelicolor hypothetical 20.1 kDa protein%2C 181 aa%3B fasta scores: opt: 235 z-score: 338.0 E(): 2.7e-11%3B 72.3%25 identity in 47 aa overlap. Downstream of the cosmid there are two other CDS similar to contiguous parts of the same hypothetical protein;end_range=6962080,.;gbkey=CDS;gene=SCIF3.03c;partial=true;product=hypothetical protein;protein_id=NP_630398.1;transl_table=11
NC_003888.3	RefSeq	gene	6962111	6962281	.	+	.	ID=gene6364;Dbxref=GeneID:1101743;Name=SCIF3.04;gbkey=Gene;gene=SCIF3.04;gene_biotype=protein_coding;gene_synonym=SCIF3.04;locus_tag=SCO6302
NC_003888.3	RefSeq	CDS	6962111	6962281	.	+	0	ID=cds6244;Parent=gene6364;Dbxref=Genbank:NP_630399.1,GeneID:1101743;Name=NP_630399.1;Note=SCIF3.04%2C unknown%2C len: 56 aa;gbkey=CDS;gene=SCIF3.04;product=hypothetical protein;protein_id=NP_630399.1;transl_table=11
NC_003888.3	RefSeq	gene	6962349	6963320	.	-	.	ID=gene6365;Dbxref=GeneID:1101744;Name=SCIF3.05c;gbkey=Gene;gene=SCIF3.05c;gene_biotype=protein_coding;gene_synonym=SCIF3.05c;locus_tag=SCO6303
NC_003888.3	RefSeq	CDS	6962349	6963320	.	-	0	ID=cds6245;Parent=gene6365;Dbxref=Genbank:NP_630400.1,GeneID:1101744;Name=NP_630400.1;Note=SCIF3.05c%2C conserved hypothetical protein%2C len: 323 aa%3B similar to TR:Q9X4X0 (EMBL:AF119621) Pseudomonas abietaniphila hypothetical protein which C-terminus is similar to isomerase/decarboxylase%2C DitH%2C 336 aa%3B fasta scores: opt: 481 z-score: 532.1 E(): 4.2e-22%3B 38.4%25 identity in 310 aa overlap. Contains Pfam match to entry PF01557 FAA_hydrolase%2C Fumarylacetoacetate (FAA) hydrolase family;gbkey=CDS;gene=SCIF3.05c;product=hydroxylase;protein_id=NP_630400.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6962511	6963035	.	-	.	ID=id8283;Dbxref=GeneID:1101744;Note=Pfam match to entry PF01557 FAA_hydrolase%2C Fumarylacetoacetate (FAA) hydrolase family%2C score 124.80%2C E-value 1.6e-33;gbkey=misc_feature;gene=SCIF3.05c
NC_003888.3	RefSeq	ribosome_entry_site	6963328	6963333	.	-	.	ID=id8284;gbkey=RBS
NC_003888.3	RefSeq	gene	6963368	6964300	.	-	.	ID=gene6366;Dbxref=GeneID:1101745;Name=SCIF3.06c;gbkey=Gene;gene=SCIF3.06c;gene_biotype=protein_coding;gene_synonym=SCIF3.06c;locus_tag=SCO6304
NC_003888.3	RefSeq	CDS	6963368	6964300	.	-	0	ID=cds6246;Parent=gene6366;Dbxref=Genbank:NP_630401.1,GeneID:1101745;Name=NP_630401.1;Note=SCIF3.06c%2C probable oxidoreductase%2C len: 310 aa%3B similar to SW:MPC2_ALCEU (EMBL:X52415) Alcaligenes eutrophus metapyrocatechase 2 (EC 1.13.11.2) McpII%2C 320 aa%3B fasta scores: opt: 301 z-score: 359.5 E(): 1.7e-12%3B 28.1%25 identity in 299 aa overlap. Contains Pfam match to entry PF01013 Extradiol_dioxy%2C Extradiol ring-cleavage dioxygenase;gbkey=CDS;gene=SCIF3.06c;product=oxidoreductase;protein_id=NP_630401.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6963416	6964297	.	-	.	ID=id8285;Dbxref=GeneID:1101745;Note=Pfam match to entry PF01013 Extradiol_dioxy%2C Extradiol ring-cleavage dioxygenase%2C score 56.50%2C E-value 5.7e-13;gbkey=misc_feature;gene=SCIF3.06c
NC_003888.3	RefSeq	gene	6964306	6965349	.	-	.	ID=gene6367;Dbxref=GeneID:1101746;Name=SCIF3.07c;gbkey=Gene;gene=SCIF3.07c;gene_biotype=protein_coding;gene_synonym=SCIF3.07c;locus_tag=SCO6305
NC_003888.3	RefSeq	CDS	6964306	6965349	.	-	0	ID=cds6247;Parent=gene6367;Dbxref=Genbank:NP_630402.1,GeneID:1101746;Name=NP_630402.1;Note=SCIF3.07c%2C conserved hypothetical protein%2C len: 347 aa%3B similar to TR:Q55861 (EMBL:D64004) Synechocystis sp. hypothetical 38.3 kDa protein SLR0619%2C 348 aa%3B fasta scores: opt: 416 z-score: 477.8 E(): 4.4e-19%3B 30.8%25 identity in 312 aa overlap;gbkey=CDS;gene=SCIF3.07c;product=hypothetical protein;protein_id=NP_630402.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6964310	6964314	.	-	.	ID=id8286;Dbxref=GeneID:1101746;gbkey=RBS;gene=SCIF3.07c
NC_003888.3	RefSeq	gene	6965355	6966485	.	-	.	ID=gene6368;Dbxref=GeneID:1101747;Name=SCIF3.08c;gbkey=Gene;gene=SCIF3.08c;gene_biotype=protein_coding;gene_synonym=SCIF3.08c;locus_tag=SCO6306
NC_003888.3	RefSeq	CDS	6965355	6966485	.	-	0	ID=cds6248;Parent=gene6368;Dbxref=Genbank:NP_630403.1,GeneID:1101747;Name=NP_630403.1;Note=SCIF3.08c%2C possible oxidoreductase%2C len: 376 aa%3B similar to TR:AAG05975 (EMBL:AE004687) Pseudomonas aeruginosa probable FAD-dependent monooxygenase PA2587%2C 382 aa%3B fasta scores: opt: 443 z-score: 500.7 E(): 2.4e-20%3B 31.4%25 identity in 354 aa overlap. Contains Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain and PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SCIF3.08c;product=hypothetical protein;protein_id=NP_630403.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6965448	6966032	.	-	.	ID=id8287;Dbxref=GeneID:1101747;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 85.70%2C E-value 9.4e-22;gbkey=misc_feature;gene=SCIF3.08c
NC_003888.3	RefSeq	sequence_feature	6966051	6966467	.	-	.	ID=id8288;Dbxref=GeneID:1101747;Note=Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain%2C score 5.20%2C E-value 0.00016;gbkey=misc_feature;gene=SCIF3.08c
NC_003888.3	RefSeq	ribosome_entry_site	6966492	6966495	.	-	.	ID=id8289;gbkey=RBS
NC_003888.3	RefSeq	gene	6966512	6967474	.	-	.	ID=gene6369;Dbxref=GeneID:1101748;Name=SCIF3.09c;gbkey=Gene;gene=SCIF3.09c;gene_biotype=protein_coding;gene_synonym=SCIF3.09c;locus_tag=SCO6307
NC_003888.3	RefSeq	CDS	6966512	6967474	.	-	0	ID=cds6249;Parent=gene6369;Dbxref=Genbank:NP_630404.1,GeneID:1101748;Name=NP_630404.1;Note=SCIF3.09c%2C cyclase%2C len: 320 aa%3B similar to TRNEW:AAK64254 (EMBL:AF373840) hypothetical polyketide cyclase from nicotine degradation cluster of Arthrobacter nicotinovorans Plasmid pA01 (310 aa) fasta scores%3B opt: 394%2C Z-score: 442.9%2C E(): 4.9e-17%2C 31.000%25 identity (32.517%25 ungapped) in 300 aa overlap.;gbkey=CDS;gene=SCIF3.09c;product=cyclase;protein_id=NP_630404.1;transl_table=11
NC_003888.3	RefSeq	gene	6967471	6968472	.	-	.	ID=gene6370;Dbxref=GeneID:1101749;Name=SCIF3.10c;gbkey=Gene;gene=SCIF3.10c;gene_biotype=protein_coding;gene_synonym=SCIF3.10c;locus_tag=SCO6308
NC_003888.3	RefSeq	CDS	6967471	6968472	.	-	0	ID=cds6250;Parent=gene6370;Dbxref=Genbank:NP_630405.1,GeneID:1101749;Name=NP_630405.1;Note=SCIF3.10c%2C possible hydrolase%2C len: 333 aa%3B similar to TR:Q9RJW4 (EMBL:AL117387) Streptomyces coelicolor  2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase SCF41.05%2C 292 aa%3B fasta scores: opt: 496 z-score: 573.9 E(): 2e-24%3B 36.3%25 identity in 311 aa overlap. Contains Pfam match to entry PF01557 FAA_hydrolase%2C Fumarylacetoacetate (FAA) hydrolase family;gbkey=CDS;gene=SCIF3.10c;product=hydrolase;protein_id=NP_630405.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6967482	6967486	.	-	.	ID=id8290;Dbxref=GeneID:1101749;gbkey=RBS;gene=SCIF3.10c
NC_003888.3	RefSeq	sequence_feature	6967561	6968076	.	-	.	ID=id8291;Dbxref=GeneID:1101749;Note=Pfam match to entry PF01557 FAA_hydrolase%2C Fumarylacetoacetate (FAA) hydrolase family%2C score 178.40%2C E-value 1.2e-49;gbkey=misc_feature;gene=SCIF3.10c
NC_003888.3	RefSeq	ribosome_entry_site	6968475	6968481	.	-	.	ID=id8292;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6968587	6968591	.	+	.	ID=id8293;gbkey=RBS
NC_003888.3	RefSeq	gene	6968600	6969571	.	+	.	ID=gene6371;Dbxref=GeneID:1101750;Name=SCIF3.11;gbkey=Gene;gene=SCIF3.11;gene_biotype=protein_coding;gene_synonym=SCIF3.11;locus_tag=SCO6309
NC_003888.3	RefSeq	CDS	6968600	6969571	.	+	0	ID=cds6251;Parent=gene6371;Dbxref=Genbank:NP_630406.1,GeneID:1101750;Name=NP_630406.1;Note=SCIF3.11%2C probable lysR-family transcriptional regulator%2C len: 323 aa%3B similar to SW:NOD2_RHITR (EMBL:L01272) Rhizobium tropici nodulation protein D2 NodD2%2C 314 aa%3B fasta scores: opt: 534 z-score: 620.6 E(): 5e-27%3B 34.7%25 identity in 314 aa overlap and to TR:CAC05670 (EMBL:Y19177) Streptomyces antibioticus transcriptional regulator%2C 308 aa%3B fasta scores: opt: 1769 z-score: 2038.8 E(): 0%3B 87.3%25 identity in 308 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and PF01046 NodD_C_term%2C NodD transcription activator carboxyl terminal region and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Also contains possible helix-turn-helix motif at residues 21..42 (+3.27 SD);gbkey=CDS;gene=SCIF3.11;product=LysR family transcriptional regulator;protein_id=NP_630406.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6968621	6969013	.	+	.	ID=id8294;Dbxref=GeneID:1101750;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 68.40%2C E-value 1.6e-16;gbkey=misc_feature;gene=SCIF3.11
NC_003888.3	RefSeq	sequence_feature	6968663	6968755	.	+	.	ID=id8295;Dbxref=GeneID:1101750;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SCIF3.11
NC_003888.3	RefSeq	sequence_feature	6969059	6969493	.	+	.	ID=id8296;Dbxref=GeneID:1101750;Note=Pfam match to entry PF01046 NodD_C_term%2C NodD transcription activator carboxyl terminal region%2C score 61.20%2C E-value 5.2e-17;gbkey=misc_feature;gene=SCIF3.11
NC_003888.3	RefSeq	gene	6970033	6971376	.	+	.	ID=gene6372;Dbxref=GeneID:1101751;Name=SCIF3.12;gbkey=Gene;gene=SCIF3.12;gene_biotype=protein_coding;gene_synonym=SCIF3.12;locus_tag=SCO6310
NC_003888.3	RefSeq	CDS	6970033	6971376	.	+	0	ID=cds6252;Parent=gene6372;Dbxref=Genbank:NP_630407.1,GeneID:1101751;Name=NP_630407.1;Note=SCIF3.12%2C probable cytochrome P450%2C len: 447 aa%3B similar to SW:CPXG_STRSQ (EMBL:M31939) Streptomyces sp. cytochrome P450 105C1 (EC 1.14.-.-) ChoP%2C 381 aa%3B fasta scores: opt: 301 z-score: 318.8 E(): 3.2e-10%3B 28.8%25 identity in 386 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450;gbkey=CDS;gene=SCIF3.12;product=cytochrome P450;protein_id=NP_630407.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6970897	6971253	.	+	.	ID=id8297;Dbxref=GeneID:1101751;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 13.10%2C E-value 0.0066;gbkey=misc_feature;gene=SCIF3.12
NC_003888.3	RefSeq	ribosome_entry_site	6971546	6971551	.	+	.	ID=id8298;gbkey=RBS
NC_003888.3	RefSeq	gene	6971557	6971979	.	+	.	ID=gene6373;Dbxref=GeneID:1101752;Name=SCIF3.13;gbkey=Gene;gene=SCIF3.13;gene_biotype=protein_coding;gene_synonym=SCIF3.13;locus_tag=SCO6311
NC_003888.3	RefSeq	CDS	6971557	6971979	.	+	0	ID=cds6253;Parent=gene6373;Dbxref=Genbank:NP_630408.1,GeneID:1101752;Name=NP_630408.1;Note=SCIF3.13%2C possible integral membrane protein%2C len: 140 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCIF3.13;product=hypothetical protein;protein_id=NP_630408.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6971971	6972769	.	-	.	ID=id8299;Note=previously sequenced DNA fragment. EMBL:AB000384 Streptomyces coelicolor gene for CprA%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	6972028	6972675	.	-	.	ID=gene6374;Dbxref=GeneID:1101753;Name=cprA;gbkey=Gene;gene=cprA;gene_biotype=protein_coding;gene_synonym=cprA,SCIF3.14c;locus_tag=SCO6312
NC_003888.3	RefSeq	CDS	6972028	6972675	.	-	0	ID=cds6254;Parent=gene6374;Dbxref=Genbank:NP_630409.1,GeneID:1101753;Name=NP_630409.1;Note=SCIF3.14c%2C cprA%2C transcriptional regulator%2C len: 215 aa%3B identical to previously sequenced TR:O66121 (EMBL:AB000384) Streptomyces coelicolor CprS%2C 215 aa. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 30..51 (+3.61 SD);gbkey=CDS;gene=cprA;product=transcriptional regulator;protein_id=NP_630409.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6972496	6972636	.	-	.	ID=id8300;Dbxref=GeneID:1101753;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 74.10%2C E-value 2.8e-18;gbkey=misc_feature;gene=cprA
NC_003888.3	RefSeq	ribosome_entry_site	6972686	6972689	.	-	.	ID=id8301;gbkey=RBS
NC_003888.3	RefSeq	gene	6972975	6974066	.	-	.	ID=gene6375;Dbxref=GeneID:1101754;Name=SCIF3.15c;gbkey=Gene;gene=SCIF3.15c;gene_biotype=protein_coding;gene_synonym=SCIF3.15c;locus_tag=SCO6313
NC_003888.3	RefSeq	CDS	6972975	6974066	.	-	0	ID=cds6255;Parent=gene6375;Dbxref=Genbank:NP_630410.1,GeneID:1101754;Name=NP_630410.1;Note=SCIF3.15c%2C possible integral membrane protein%2C len: 363 aa%3B highly similar to TR:Q9KY24 (EMBL:AL356892) Streptomyces coelicolor integral membrane protein SCC8A.24c%2C 380 aa%3B fasta scores: opt: 2130 z-score: 2459.4 E(): 0%3B 95.5%25 identity in 352 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCIF3.15c;product=hypothetical protein;protein_id=NP_630410.1;transl_table=11
NC_003888.3	RefSeq	gene	6974063	6974673	.	-	.	ID=gene6376;Dbxref=GeneID:1101755;Name=SCIF3.16c;gbkey=Gene;gene=SCIF3.16c;gene_biotype=pseudogene;gene_synonym=SCIF3.16c;locus_tag=SCO6314;pseudo=true
NC_003888.3	RefSeq	sequence_feature	6974063	6974673	.	-	.	ID=id8302;Dbxref=GeneID:1101755;Note=SCIF3.16c. Similar to TR:Q9XAJ6 (EMBL:AL079348) Streptomyces coelicolor regulator SC66T3.17%2C 360 aa%3B fasta scores: opt: 193 z-score: 193.6 E(): 0.003%3B 40.7%25 identity in 108 aa overlap;gbkey=misc_feature;gene=SCIF3.16c
NC_003888.3	RefSeq	gene	6974828	6975044	.	-	.	ID=gene6377;Dbxref=GeneID:1101756;Name=SCIF3.17c;gbkey=Gene;gene=SCIF3.17c;gene_biotype=pseudogene;gene_synonym=SCIF3.17c;locus_tag=SCO6315;pseudo=true
NC_003888.3	RefSeq	sequence_feature	6974828	6975044	.	-	.	ID=id8303;Dbxref=GeneID:1101756;Note=SCIF3.17c. Similar to TR:Q9K448 (EMBL:AL359216) Streptomyces coelicolor membrane protein SC1D2.02c%2C 131 aa%3B fasta scores: opt: 154 z-score: 219.3 E(): 0.00011%3B 67.6%25 identity in 37 aa overlap;gbkey=misc_feature;gene=SCIF3.17c
NC_003888.3	RefSeq	gene	6975046	6975153	.	-	.	ID=gene6378;Dbxref=GeneID:1101757;Name=SCIF3.18;gbkey=Gene;gene=SCIF3.18;gene_biotype=protein_coding;gene_synonym=SCIF3.18;locus_tag=SCO6316
NC_003888.3	RefSeq	CDS	6975046	6975153	.	-	0	ID=cds6256;Parent=gene6378;Dbxref=Genbank:NP_630411.1,GeneID:1101757;Name=NP_630411.1;Note=SCIF3.18. Similar to part of TR:Q9K447 (EMBL:AL359216) Streptomyces coelicolor hypothetical 20.1 kDa protein%2C 181 aa%3B fasta scores: opt: 192 z-score: 325.7 E(): 1.3e-10%3B 83.3%25 identity in 36 aa overlap. Upstream CDS similar to a contiguous part of the same hypothetical protein%2C but reading in the opposite orientation;end_range=6975153,.;gbkey=CDS;gene=SCIF3.18;partial=true;product=hypothetical protein;protein_id=NP_630411.1;start_range=.,6975046;transl_table=11
NC_003888.3	RefSeq	gene	6975194	6975283	.	+	.	ID=gene6379;Dbxref=GeneID:1101758;Name=SCIF3.19;gbkey=Gene;gene=SCIF3.19;gene_biotype=protein_coding;gene_synonym=SCIF3.19;locus_tag=SCO6317
NC_003888.3	RefSeq	CDS	6975194	6975283	.	+	0	ID=cds6257;Parent=gene6379;Dbxref=Genbank:NP_630412.1,GeneID:1101758;Name=NP_630412.1;Note=SCIF3.19. Similar to part of TR:Q9K447 (EMBL:AL359216) Streptomyces coelicolor hypothetical 20.1 kDa protein%2C 181 aa%3B fasta scores: opt: 169 z-score: 305.5 E(): 1.8e-09%3B 83.3%25 identity in 30 aa overlap. Upstream CDS similar to a contiguous part of the same hypothetical protein%2C but reading in the opposite orientation;end_range=6975283,.;gbkey=CDS;gene=SCIF3.19;partial=true;product=hypothetical protein;protein_id=NP_630412.1;start_range=.,6975194;transl_table=11
NC_003888.3	RefSeq	gene	6975868	6976440	.	-	.	ID=gene6380;Dbxref=GeneID:1101759;Name=SCIF3.20c;gbkey=Gene;gene=SCIF3.20c;gene_biotype=protein_coding;gene_synonym=SCIF3.20c;locus_tag=SCO6318
NC_003888.3	RefSeq	CDS	6975868	6976440	.	-	0	ID=cds6258;Parent=gene6380;Dbxref=Genbank:NP_630413.1,GeneID:1101759;Name=NP_630413.1;Note=SCIF3.20c%2C conserved hypothetical protein%2C len: 190 aa%3B similar to SW:TERD_ALCSP (EMBL:M20238) Alcaligenes sp. tellurium resistance protein TerD%2C 192 aa%3B fasta scores: opt: 204 z-score: 247.1 E(): 3.2e-06%3B 28.3%25 identity in 173 aa overlap and to TR:CAA18342 (EMBL:AL022268) Streptomyces coelicolor hypothetical protein SC4H2.27c%2C 202 aa%3B fasta scores: opt: 685 z-score: 748.3 E(): 0%3B 56.1%25 identity in 180 aa overlap. Contains Pfam match to entry PF02342 TerD;gbkey=CDS;gene=SCIF3.20c;product=hypothetical protein;protein_id=NP_630413.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6975886	6976263	.	-	.	ID=id8304;Dbxref=GeneID:1101759;Note=Pfam match to entry PF02342 TerD%2C %2C score 31.80%2C E-value 1.6e-05;gbkey=misc_feature;gene=SCIF3.20c
NC_003888.3	RefSeq	ribosome_entry_site	6976837	6976840	.	+	.	ID=id8305;gbkey=RBS
NC_003888.3	RefSeq	gene	6976852	6977634	.	+	.	ID=gene6381;Dbxref=GeneID:1101760;Name=SCIF3.21;gbkey=Gene;gene=SCIF3.21;gene_biotype=protein_coding;gene_synonym=SCIF3.21;locus_tag=SCO6319
NC_003888.3	RefSeq	CDS	6976852	6977634	.	+	0	ID=cds6259;Parent=gene6381;Dbxref=Genbank:NP_630414.1,GeneID:1101760;Name=NP_630414.1;Note=SCIF3.21%2C possible lipoprotein%2C len: 260 aa%3B similar to TR:Q9XAG2 (EMBL:AL079356) Streptomyces coelicolor possible membrane protein SC6G9.20%2C 303 aa%3B fasta scores: opt: 984 z-score: 1092.9 E(): 0%3B 58.5%25 identity in 287 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCIF3.21;product=lipoprotein;protein_id=NP_630414.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6976918	6976950	.	+	.	ID=id8306;Dbxref=GeneID:1101760;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCIF3.21
NC_003888.3	RefSeq	gene	6977697	6979466	.	-	.	ID=gene6382;Dbxref=GeneID:1101761;Name=SCIF3.22c;gbkey=Gene;gene=SCIF3.22c;gene_biotype=protein_coding;gene_synonym=SCIF3.22c;locus_tag=SCO6320
NC_003888.3	RefSeq	CDS	6977697	6979466	.	-	0	ID=cds6260;Parent=gene6382;Dbxref=Genbank:NP_630415.1,GeneID:1101761;Name=NP_630415.1;Note=SCIF3.22c%2C possible transport integral membrane protein%2C len: 589 aa%3B similar to TR:O28857 (EMBL:AE001006) Archaeoglobus fulgidus chloride channel%2C AF1415%2C 589 aa%3B fasta scores: opt: 941 z-score: 956.9 E(): 0%3B 34.4%25 identity in 576 aa overlap. Contains Pfam match to entry PF00654 voltage_CLC%2C Voltage gated chloride channels and 2x PF00571 CBS%2C CBS domain. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCIF3.22c;product=transport integral membrane protein;protein_id=NP_630415.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6977736	6977900	.	-	.	ID=id8307;Dbxref=GeneID:1101761;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 6.80%2C E-value 6.7;gbkey=misc_feature;gene=SCIF3.22c
NC_003888.3	RefSeq	sequence_feature	6977931	6978092	.	-	.	ID=id8308;Dbxref=GeneID:1101761;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 31.00%2C E-value 2.8e-05;gbkey=misc_feature;gene=SCIF3.22c
NC_003888.3	RefSeq	sequence_feature	6978186	6979235	.	-	.	ID=id8309;Dbxref=GeneID:1101761;Note=Pfam match to entry PF00654 voltage_CLC%2C Voltage gated chloride channels%2C score 242.60%2C E-value 5.3e-71;gbkey=misc_feature;gene=SCIF3.22c
NC_003888.3	RefSeq	ribosome_entry_site	6979478	6979481	.	-	.	ID=id8310;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6980424	6980429	.	+	.	ID=id8311;gbkey=RBS
NC_003888.3	RefSeq	gene	6980436	6981524	.	+	.	ID=gene6383;Dbxref=GeneID:1101762;Name=SCIF3.23;gbkey=Gene;gene=SCIF3.23;gene_biotype=protein_coding;gene_synonym=SCIF3.23;locus_tag=SCO6321
NC_003888.3	RefSeq	CDS	6980436	6981524	.	+	0	ID=cds6261;Parent=gene6383;Dbxref=Genbank:NP_630416.1,GeneID:1101762;Name=NP_630416.1;Note=SCIF3.23%2C possible integral membrane protein%2C len: 362 aa%3B highly similar to TR:Q9KZX9 (EMBL:AL353815) Streptomyces coelicolor integral membrane protein SCD6.25%2C 362 aa%3B fasta scores: opt: 1695 z-score: 1862.4 E(): 0%3B 73.8%25 identity in 362 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCIF3.23;product=hypothetical protein;protein_id=NP_630416.1;transl_table=11
NC_003888.3	RefSeq	gene	6982205	6982623	.	+	.	ID=gene6384;Dbxref=GeneID:1101763;Name=SCIF3.24;gbkey=Gene;gene=SCIF3.24;gene_biotype=pseudogene;gene_synonym=SCIF3.24;locus_tag=SCO6322;pseudo=true
NC_003888.3	RefSeq	sequence_feature	6982205	6982623	.	+	.	ID=id8312;Dbxref=GeneID:1101763;Note=SCIF3.24%2C similar to TR:Q9L147 (EMBL:AL158061) Streptomyces coelicolor pyruvate dehydrogenase (pyruvate oxidase) SC6D11.08%2C 600 aa%3B fasta scores: opt: 139 z-score: 217.3 E(): 0.00014%3B 56.1%25 identity in 41 aa overlap;gbkey=misc_feature;gene=SCIF3.24
NC_003888.3	RefSeq	gene	6983231	6983887	.	-	.	ID=gene6385;Dbxref=GeneID:1101764;Name=SCIF3.25c;gbkey=Gene;gene=SCIF3.25c;gene_biotype=protein_coding;gene_synonym=SCIF3.25c;locus_tag=SCO6323
NC_003888.3	RefSeq	CDS	6983231	6983887	.	-	0	ID=cds6262;Parent=gene6385;Dbxref=Genbank:NP_630417.1,GeneID:1101764;Name=NP_630417.1;Note=SCIF3.25c%2C probable tetR-family regulatory protein%2C len: 218 aa%3B similar to TR:O66121 (EMBL:AB000384) Streptomyces coelicolor regulatory protein CprS%2C 215 aa%3B fasta scores: opt: 370 z-score: 471.3 E(): 1e-18%3B 36.1%25 identity in 191 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SCIF3.25c;product=TetR family transcriptional regulator;protein_id=NP_630417.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6983714	6983854	.	-	.	ID=id8313;Dbxref=GeneID:1101764;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 62.80%2C E-value 7.4e-15;gbkey=misc_feature;gene=SCIF3.25c
NC_003888.3	RefSeq	ribosome_entry_site	6984264	6984268	.	+	.	ID=id8314;gbkey=RBS
NC_003888.3	RefSeq	gene	6984273	6984983	.	+	.	ID=gene6386;Dbxref=GeneID:1101765;Name=SCIF3.26;gbkey=Gene;gene=SCIF3.26;gene_biotype=protein_coding;gene_synonym=SCIF3.26;locus_tag=SCO6324
NC_003888.3	RefSeq	CDS	6984273	6984983	.	+	0	ID=cds6263;Parent=gene6386;Dbxref=Genbank:NP_630418.1,GeneID:1101765;Name=NP_630418.1;Note=SCIF3.26%2C possible hydrolase%2C len: 236 aa%3B similar to TR:CAC13072 (EMBL:AL445503) Streptomyces coelicolor hydrolase 2SCG38.13%2C 238 aa%3B fasta scores: opt: 320 z-score: 385.7 E(): 6e-14%3B 34.3%25 identity in 210 aa overlap. Contains Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase abd a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SCIF3.26;product=hydrolase;protein_id=NP_630418.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6984309	6984869	.	+	.	ID=id8315;Dbxref=GeneID:1101765;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 105.20%2C E-value 1.3e-27;gbkey=misc_feature;gene=SCIF3.26
NC_003888.3	RefSeq	sequence_feature	6984906	6984908	.	+	.	ID=id8316;Dbxref=GeneID:1101765;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SCIF3.26
NC_003888.3	RefSeq	gene	6985856	6986764	.	-	.	ID=gene6387;Dbxref=GeneID:1101766;Name=SC10H5.01c;gbkey=Gene;gene=SC10H5.01c;gene_biotype=protein_coding;gene_synonym=SC10H5.01c,SCIF3.27c;locus_tag=SCO6325
NC_003888.3	RefSeq	CDS	6985856	6986764	.	-	0	ID=cds6264;Parent=gene6387;Dbxref=Genbank:NP_733697.1,GeneID:1101766;Name=NP_733697.1;Note=SC10H5.01c%2C unknown%2C partial CDS%2C len >109 aa%3B possible integral membrane protein~SCIF3.27c%2C possible membrane protein (fragment)%2C len: >221 aa%3B similar to TR:Q9ZC02 (EMBL:AL033505) Streptomyces coelicolor hypothetical 52.3 kDa protein SC1E6.20c%2C 501 aa%3B fasta scores: opt: 245 z-score: 288.4 E(): 1.6e-08%3B 36.3%25 identity in 212 aa overlap;gbkey=CDS;gene=SC10H5.01c;product=hypothetical protein;protein_id=NP_733697.1;transl_table=11
NC_003888.3	RefSeq	gene	6986787	6987242	.	-	.	ID=gene6388;Dbxref=GeneID:1101767;Name=SC10H5.02c;gbkey=Gene;gene=SC10H5.02c;gene_biotype=protein_coding;gene_synonym=SC10H5.02c;locus_tag=SCO6326
NC_003888.3	RefSeq	CDS	6986787	6987242	.	-	0	ID=cds6265;Parent=gene6388;Dbxref=Genbank:NP_630419.1,GeneID:1101767;Name=NP_630419.1;Note=SC10H5.02c%2C probable integral membrane protein%2C len: 151 aa%3B similar to S. coelicolor hypothetical protein TR:O54194 (EMBL:AL021411) SC7H1.35 (155 aa)%2C fasta scores%3B opt: 431 z-score: 749.8 E(): 0%2C 53.5%25 identity in 114 aa overlap;gbkey=CDS;gene=SC10H5.02c;product=hypothetical protein;protein_id=NP_630419.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6987249	6987252	.	-	.	ID=id8317;Note=possible RBS upstream of SC10H5.02c;gbkey=RBS
NC_003888.3	RefSeq	gene	6987274	6987738	.	-	.	ID=gene6389;Dbxref=GeneID:1101768;Name=SC10H5.03c;gbkey=Gene;gene=SC10H5.03c;gene_biotype=protein_coding;gene_synonym=SC10H5.03c;locus_tag=SCO6327
NC_003888.3	RefSeq	CDS	6987274	6987738	.	-	0	ID=cds6266;Parent=gene6389;Dbxref=Genbank:NP_630420.1,GeneID:1101768;Name=NP_630420.1;Note=SC10H5.03c%2C probable integral membrane protein%2C len: 154 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10H5.03c;product=hypothetical protein;protein_id=NP_630420.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6987745	6987749	.	-	.	ID=id8318;Note=possible RBS upstream of SC10H5.03c;gbkey=RBS
NC_003888.3	RefSeq	gene	6987864	6988172	.	-	.	ID=gene6390;Dbxref=GeneID:1101769;Name=SC10H5.04c;gbkey=Gene;gene=SC10H5.04c;gene_biotype=protein_coding;gene_synonym=SC10H5.04c;locus_tag=SCO6328
NC_003888.3	RefSeq	CDS	6987864	6988172	.	-	0	ID=cds6267;Parent=gene6390;Dbxref=Genbank:NP_630421.1,GeneID:1101769;Name=NP_630421.1;Note=SC10H5.04c%2C membrane protein%2C len: 103 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10H5.04c;product=hypothetical protein;protein_id=NP_630421.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6988175	6988178	.	-	.	ID=id8319;Note=possible RBS upstream of SC10H5.05c;gbkey=RBS
NC_003888.3	RefSeq	gene	6988370	6988459	.	+	.	ID=gene6391;Dbxref=GeneID:1101770;Name=SC10H5.05;gbkey=Gene;gene=SC10H5.05;gene_biotype=protein_coding;gene_synonym=SC10H5.05;locus_tag=SCO6329
NC_003888.3	RefSeq	CDS	6988370	6988459	.	+	0	ID=cds6268;Parent=gene6391;Dbxref=Genbank:NP_630422.1,GeneID:1101770;Name=NP_630422.1;Note=SC10H5.05%2C questionable ORF%2C len: 29 aa;gbkey=CDS;gene=SC10H5.05;product=hypothetical protein;protein_id=NP_630422.1;transl_table=11
NC_003888.3	RefSeq	gene	6988456	6989079	.	+	.	ID=gene6392;Dbxref=GeneID:1101771;Name=SC10H5.06;gbkey=Gene;gene=SC10H5.06;gene_biotype=protein_coding;gene_synonym=SC10H5.06;locus_tag=SCO6330
NC_003888.3	RefSeq	CDS	6988456	6989079	.	+	0	ID=cds6269;Parent=gene6392;Dbxref=Genbank:NP_630423.1,GeneID:1101771;Name=NP_630423.1;Note=SC10H5.06%2C probable membrane protein%2C len: 207 aa%3B similar to S. coelicolor TR:O54192 SC7H1.33c (191 aa)%2C fasta scores%3B opt: 312 z-score: 355.2 E(): 1.6e-12%2C 36.8%25 identity in 182 aa overlap;gbkey=CDS;gene=SC10H5.06;product=hypothetical protein;protein_id=NP_630423.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6989064	6989068	.	+	.	ID=id8320;Dbxref=GeneID:1101771;Note=possible RBS upstream of SC10H5.07;gbkey=RBS;gene=SC10H5.06
NC_003888.3	RefSeq	gene	6989076	6990485	.	+	.	ID=gene6393;Dbxref=GeneID:1101772;Name=SC10H5.07;gbkey=Gene;gene=SC10H5.07;gene_biotype=protein_coding;gene_synonym=SC10H5.07;locus_tag=SCO6331
NC_003888.3	RefSeq	CDS	6989076	6990485	.	+	0	ID=cds6270;Parent=gene6393;Dbxref=Genbank:NP_630424.1,GeneID:1101772;Name=NP_630424.1;Note=SC10H5.07%2C hypothetical protein%2C len: 469 aa%3B similar to TR:Q9XA23 (EMBL:AL079308) Streptomyces coelicolor hypothetical protein SCH69.11c%2C 509 aa%3B fasta scores: opt: 648 Z-score: 735.0 E(): 2.6e-33%3B 41.614%25 identityin 471 aa overlap;gbkey=CDS;gene=SC10H5.07;product=hypothetical protein;protein_id=NP_630424.1;transl_table=11
NC_003888.3	RefSeq	gene	6990537	6990734	.	-	.	ID=gene6394;Dbxref=GeneID:1101773;Name=SC10H5.08c;gbkey=Gene;gene=SC10H5.08c;gene_biotype=protein_coding;gene_synonym=SC10H5.08c;locus_tag=SCO6332
NC_003888.3	RefSeq	CDS	6990537	6990734	.	-	0	ID=cds6271;Parent=gene6394;Dbxref=Genbank:NP_630425.1,GeneID:1101773;Name=NP_630425.1;Note=SC10H5.08c%2C unknown%2C len: 65 aa;gbkey=CDS;gene=SC10H5.08c;product=hypothetical protein;protein_id=NP_630425.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6990751	6990756	.	-	.	ID=id8321;Note=possible RBS upstream of SC10H5.08c;gbkey=RBS
NC_003888.3	RefSeq	gene	6990876	6991409	.	-	.	ID=gene6395;Dbxref=GeneID:1101774;Name=SC10H5.09c;gbkey=Gene;gene=SC10H5.09c;gene_biotype=protein_coding;gene_synonym=SC10H5.09c,SC3A7.01c;locus_tag=SCO6333
NC_003888.3	RefSeq	CDS	6990876	6991409	.	-	0	ID=cds6272;Parent=gene6395;Dbxref=Genbank:NP_733698.1,GeneID:1101774;Name=NP_733698.1;Note=SC3A7.01c%2C unknown%2C partial CDS%2C len: >68 aa~SC10H5.09c%2C probable integral membrane protein%2C partial CDS len: >143 aa%3B some similarity in C-terminus to S. coelicolor hypothetical protein TR:O54106 (EMBL:AL021529) SC10A5.15 (114 aa)%2C fasta scores%3B opt: 145 z-score: 233.8 E(): 9.2e-06%2C 33.3%25 identity in 81 aa overlap. Overlaps and extends SC3A7.01c;gbkey=CDS;gene=SC10H5.09c;product=hypothetical protein;protein_id=NP_733698.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6991206	6991307	.	+	.	ID=id8322;Note=overlap with cosmid 3A7 from 1 to 102;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	6991415	6991421	.	-	.	ID=id8323;Note=possible RBS upstream of SC3A7.01c;gbkey=RBS
NC_003888.3	RefSeq	gene	6991755	6994433	.	-	.	ID=gene6396;Dbxref=GeneID:1101775;Name=SC3A7.02c;gbkey=Gene;gene=SC3A7.02c;gene_biotype=protein_coding;gene_synonym=SC3A7.02c;locus_tag=SCO6334
NC_003888.3	RefSeq	CDS	6991755	6994433	.	-	0	ID=cds6273;Parent=gene6396;Dbxref=Genbank:NP_630426.1,GeneID:1101775;Name=NP_630426.1;Note=SC3A7.02c%2C probable transcritional regulator%2C len: 892 aa%3B similar to e.g. MALT_ECOLI MalT regulatory protein (901 aa)%2C fasta scores%3B opt: 540 z-score: 495.9 E(): 2.3e-20%2C 26.2%25 identity in 936 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop)%2C helix-turn-helix motif from aa 848 to 869 (Score 1229%2C +3.37 SD) and Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 50.40%2C E-value 3.8e-11;gbkey=CDS;gene=SC3A7.02c;product=transcriptional regulator;protein_id=NP_630426.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6991758	6991949	.	-	.	ID=id8324;Dbxref=GeneID:1101775;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 50.40%2C E-value 3.8e-11;gbkey=misc_feature;gene=SC3A7.02c
NC_003888.3	RefSeq	sequence_feature	6994233	6994256	.	-	.	ID=id8325;Dbxref=GeneID:1101775;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3A7.02c
NC_003888.3	RefSeq	ribosome_entry_site	6994437	6994440	.	-	.	ID=id8326;Note=possible RBS upstream of SC3A7.02c;gbkey=RBS
NC_003888.3	RefSeq	gene	6994439	6995353	.	-	.	ID=gene6397;Dbxref=GeneID:1101776;Name=SC3A7.03c;gbkey=Gene;gene=SC3A7.03c;gene_biotype=protein_coding;gene_synonym=SC3A7.03c;locus_tag=SCO6335
NC_003888.3	RefSeq	CDS	6994439	6995353	.	-	0	ID=cds6274;Parent=gene6397;Dbxref=Genbank:NP_630427.1,GeneID:1101776;Name=NP_630427.1;Note=SC3A7.03c%2C questionable ORF%2C len: 304 aa%3B this ORF is not predicted as coding by positional base preference;gbkey=CDS;gene=SC3A7.03c;product=hypothetical protein;protein_id=NP_630427.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6995379	6995383	.	+	.	ID=id8327;Note=possible RBS upstream of SC3A7.04;gbkey=RBS
NC_003888.3	RefSeq	gene	6995390	6996544	.	+	.	ID=gene6398;Dbxref=GeneID:1101777;Name=SC3A7.04;gbkey=Gene;gene=SC3A7.04;gene_biotype=protein_coding;gene_synonym=SC3A7.04;locus_tag=SCO6336
NC_003888.3	RefSeq	CDS	6995390	6996544	.	+	0	ID=cds6275;Parent=gene6398;Dbxref=Genbank:NP_630428.1,GeneID:1101777;Name=NP_630428.1;Note=SC3A7.04%2C questionable ORF%2C len: 384 aa%3B this ORF is not predicted as coding by positional base preference;gbkey=CDS;gene=SC3A7.04;product=hypothetical protein;protein_id=NP_630428.1;transl_table=11
NC_003888.3	RefSeq	gene	6996448	6997380	.	-	.	ID=gene6399;Dbxref=GeneID:1101778;Name=SC3A7.05c;gbkey=Gene;gene=SC3A7.05c;gene_biotype=protein_coding;gene_synonym=SC3A7.05c;locus_tag=SCO6337
NC_003888.3	RefSeq	CDS	6996448	6997380	.	-	0	ID=cds6276;Parent=gene6399;Dbxref=Genbank:NP_630429.1,GeneID:1101778;Name=NP_630429.1;Note=SC3A7.05c%2C probable transposase%2C len: 310 aa%3B similar to transposase ORF's from many IS3 type insertion sequences e.g. Corynebacterium glutamicum TR:Q46069 (EMBL:X69104) IS3 related insertion element ORF2 (298 aa)%2C fasta scores%3B opt: 610 z-score: 720.3 E(): 7.2e-33%2C 49.3%25 identity in 211 aa overlap;gbkey=CDS;gene=SC3A7.05c;product=transposase;protein_id=NP_630429.1;transl_table=11
NC_003888.3	RefSeq	gene	6997411	6997698	.	-	.	ID=gene6400;Dbxref=GeneID:1101779;Name=SC3A7.06c;gbkey=Gene;gene=SC3A7.06c;gene_biotype=protein_coding;gene_synonym=SC3A7.06c;locus_tag=SCO6338
NC_003888.3	RefSeq	CDS	6997411	6997698	.	-	0	ID=cds6277;Parent=gene6400;Dbxref=Genbank:NP_630430.1,GeneID:1101779;Name=NP_630430.1;Note=SC3A7.06c%2C probable transposase%2C len: 95 aa%3B similar to transposase ORF's from many IS3 type insertion sequences e.g. Corynebacterium glutamicum TR:Q46069 (EMBL:X69104) IS3 related insertion element ORF1 (97 aa)%2C fasta scores%3B opt: 244 z-score: 383.2 E(): 4.3e-14%2C 46.2%25 identity in 93 aa overlap. Contains probable coiled-coil from 55 to 93 and helix-turn-helix motif from aa 25-46 (Score 1789%2C +5.28 SD);gbkey=CDS;gene=SC3A7.06c;product=transposase;protein_id=NP_630430.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	6997705	6997709	.	-	.	ID=id8328;Note=possible RBS upstream of SC3A7.06c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	6998006	6998009	.	+	.	ID=id8329;Note=possible RBS upstream of SC3A7.07;gbkey=RBS
NC_003888.3	RefSeq	gene	6998012	6999361	.	+	.	ID=gene6401;Dbxref=GeneID:1101780;Name=SC3A7.07;gbkey=Gene;gene=SC3A7.07;gene_biotype=protein_coding;gene_synonym=SC3A7.07;locus_tag=SCO6339
NC_003888.3	RefSeq	CDS	6998012	6999361	.	+	0	ID=cds6278;Parent=gene6401;Dbxref=Genbank:NP_630431.1,GeneID:1101780;Name=NP_630431.1;Note=SC3A7.07%2C probable 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase%2C len: 449 aa%3B Similar in N- and C- termini to Rhodococcus opacus TR:G2935027 (EMBL:EMBL%3B AF003947) 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (400 aa)%2C fasta scores%3B opt: 551 z-score: 916.0 E(): 0%2C 35.2%25 identity in 435 aa overlap. N-terminus (to 250aa) is similar to e.g. Acinetobacter calcoaceticus TR:Q59093 (EMBL:L05770) beta-ketoadipate enol-lactone hydrolase (266 aa)%2C fasta scores%3B opt: 445 z-score: 470.5 E(): 5.9e-19%2C 30.3%25 identity in 244 aa overlap. C-terminus (from 330 aa) is similar to e.g. DC4C_ACICA 4-carboxymuconolactone decarboxylase (134 aa)%2C fasta scores%3B opt: 409 z-score: 435.1 E(): 5.5e-17%2C 47.2%25 identity in 123 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha /beta hydrolase fold%2C score 62.50%2C E-value 8.9e-15;gbkey=CDS;gene=SC3A7.07;product=3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase;protein_id=NP_630431.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	6998147	6998776	.	+	.	ID=id8330;Dbxref=GeneID:1101780;Note=Pfam match to entry PF00561 abhydrolase%2C alpha /beta hydrolase fold%2C score 62.50%2C E-value 8.9e-15;gbkey=misc_feature;gene=SC3A7.07
NC_003888.3	RefSeq	ribosome_entry_site	6999394	6999397	.	+	.	ID=id8331;Note=possible RBS upstreamn of SC3A7.08;gbkey=RBS
NC_003888.3	RefSeq	gene	6999405	7000040	.	+	.	ID=gene6402;Dbxref=GeneID:1101781;Name=SC3A7.08;gbkey=Gene;gene=SC3A7.08;gene_biotype=protein_coding;gene_synonym=SC3A7.08;locus_tag=SCO6340
NC_003888.3	RefSeq	CDS	6999405	7000040	.	+	0	ID=cds6279;Parent=gene6402;Dbxref=Genbank:NP_630432.1,GeneID:1101781;Name=NP_630432.1;Note=SC3A7.08%2C unknown%2C len: 211 aa%3B similar to hypothetical proteins e.g. S. coelicolor TR:O54167 (EMBL:AL021411) SC7H1.08C (202 aa)%2C fasta scores%3B opt: 243 z-score: 810.6 E(): 0%2C 43.8%25 identity in 210 aa overlap;gbkey=CDS;gene=SC3A7.08;product=hypothetical protein;protein_id=NP_630432.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7000083	7000086	.	+	.	ID=id8332;Note=possible RBS upstream of SC3A7.09;gbkey=RBS
NC_003888.3	RefSeq	gene	7000095	7000874	.	+	.	ID=gene6403;Dbxref=GeneID:1101782;Name=SC3A7.09;gbkey=Gene;gene=SC3A7.09;gene_biotype=protein_coding;gene_synonym=SC3A7.09;locus_tag=SCO6341
NC_003888.3	RefSeq	CDS	7000095	7000874	.	+	0	ID=cds6280;Parent=gene6403;Dbxref=Genbank:NP_630433.1,GeneID:1101782;Name=NP_630433.1;Note=SC3A7.09%2C probable exonuclease%2C len: 259 aa%3B similar to exonuclease III from many organisms e.g. EX3_ECOLI exodeoxyribonuclease III (EC 3.1.11.2) (268 aa)%2C fasta scores%3B opt: 302 z-score: 443.2 E(): 2e-17%2C 33.5%25 identity in 266 aa overlap;gbkey=CDS;gene=SC3A7.09;product=exonuclease;protein_id=NP_630433.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7000963	7000967	.	+	.	ID=id8333;Note=possible RBS upstream of SC3A7.10;gbkey=RBS
NC_003888.3	RefSeq	gene	7000969	7001376	.	+	.	ID=gene6404;Dbxref=GeneID:1101783;Name=SC3A7.10;gbkey=Gene;gene=SC3A7.10;gene_biotype=protein_coding;gene_synonym=SC3A7.10;locus_tag=SCO6342
NC_003888.3	RefSeq	CDS	7000969	7001376	.	+	0	ID=cds6281;Parent=gene6404;Dbxref=Genbank:NP_630434.1,GeneID:1101783;Name=NP_630434.1;Note=SC3A7.10%2C unknown%2C len: 135 aa;gbkey=CDS;gene=SC3A7.10;product=hypothetical protein;protein_id=NP_630434.1;transl_table=11
NC_003888.3	RefSeq	gene	7001411	7001539	.	+	.	ID=gene6405;Dbxref=GeneID:1101784;Name=SC3A7.11;gbkey=Gene;gene=SC3A7.11;gene_biotype=protein_coding;gene_synonym=SC3A7.11;locus_tag=SCO6343
NC_003888.3	RefSeq	CDS	7001411	7001539	.	+	0	ID=cds6282;Parent=gene6405;Dbxref=Genbank:NP_630435.1,GeneID:1101784;Name=NP_630435.1;Note=SC3A7.11%2C questionable ORF%2C len: 42 aa;gbkey=CDS;gene=SC3A7.11;product=hypothetical protein;protein_id=NP_630435.1;transl_table=11
NC_003888.3	RefSeq	gene	7001616	7003223	.	-	.	ID=gene6406;Dbxref=GeneID:1101785;Name=SC3A7.12;gbkey=Gene;gene=SC3A7.12;gene_biotype=protein_coding;gene_synonym=SC3A7.12;locus_tag=SCO6344
NC_003888.3	RefSeq	CDS	7001616	7003223	.	-	0	ID=cds6283;Parent=gene6406;Dbxref=Genbank:NP_630436.1,GeneID:1101785;Name=NP_630436.1;Note=SC3A7.12%2C probable  amidase%2C len: 535 aa%3B similar to many (except N-terminal signal peptide sequence of this CDS) e.g. SW:GATA_STRCO (EMBL:AL035569) Streptomyces coelicolor glutamyl-tRNA(Gln) amidotransferase subunit A GatA or SC8D9.11%2C 497 aa%3B fasta scores: opt: 631 Z-score: 664.3 E(): 2.4e-29%3B 33.932%25 identity in 501 aa overlap. Contains N-terminal signal sequence;gbkey=CDS;gene=SC3A7.12;product=amidase;protein_id=NP_630436.1;transl_table=11
NC_003888.3	RefSeq	gene	7003454	7004212	.	+	.	ID=gene6407;Dbxref=GeneID:1101786;Name=SC3A7.13;gbkey=Gene;gene=SC3A7.13;gene_biotype=protein_coding;gene_synonym=SC3A7.13;locus_tag=SCO6345
NC_003888.3	RefSeq	CDS	7003454	7004212	.	+	0	ID=cds6284;Parent=gene6407;Dbxref=Genbank:NP_630437.1,GeneID:1101786;Name=NP_630437.1;Note=SC3A7.13%2C possible  chitinase%2C len: 252 aa%3B Contains two regions separated by a Gly-Asp rich region from aa 171 to 197. The N-terminal region is similar to several chitin binding proteins and chitinases e.g. TR:Q54501 (EMBL:X78535) chitin binding protein precursor from Streptomyces olivaceoviridis (201 aa)%2C fasta scores%3B opt: 153 z-score: 311.6 E(): 4.2e-10%2C39.4%25 identity in 198 aa overlap%2C the short C-terminal region is similar to parts of many chitinases e.g. CHIA_ALTSO chitinase a precursor (820 aa)%2C fasta scores%3B opt: 152 z-score: 215.9 E(): 9e-05%2C 48.6%25 identity in 37 aa overlap. Contains N-terminal signal sequence.;gbkey=CDS;gene=SC3A7.13;product=chitinase;protein_id=NP_630437.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7003964	7004044	.	+	.	ID=id8334;Dbxref=GeneID:1101786;Note=3bp repeats corresponding to GD-rich region in SC3A7.13;gbkey=repeat_region;gene=SC3A7.13
NC_003888.3	RefSeq	gene	7004372	7004848	.	+	.	ID=gene6408;Dbxref=GeneID:1101787;Name=SC3A7.14;gbkey=Gene;gene=SC3A7.14;gene_biotype=protein_coding;gene_synonym=SC3A7.14;locus_tag=SCO6346
NC_003888.3	RefSeq	CDS	7004372	7004848	.	+	0	ID=cds6285;Parent=gene6408;Dbxref=Genbank:NP_630438.1,GeneID:1101787;Name=NP_630438.1;Note=SC3A7.14%2C unknown%2C len: 158 aa;gbkey=CDS;gene=SC3A7.14;product=hypothetical protein;protein_id=NP_630438.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7004941	7004947	.	+	.	ID=id8335;Note=possible RBS upstream of SC3A7.15;gbkey=RBS
NC_003888.3	RefSeq	gene	7004952	7006739	.	+	.	ID=gene6409;Dbxref=GeneID:1101788;Name=SC3A7.15;gbkey=Gene;gene=SC3A7.15;gene_biotype=protein_coding;gene_synonym=SC3A7.15;locus_tag=SCO6347
NC_003888.3	RefSeq	CDS	7004952	7006739	.	+	0	ID=cds6286;Parent=gene6409;Dbxref=Genbank:NP_630439.1,GeneID:1101788;Name=NP_630439.1;Note=SC3A7.15%2C probable beta-galactosidase%2C len: 595%3B similar to many e.g. TR:O31341 (EMBL:D88750) beta-galactosidase (EC 3.2.1.23) (lactase) from Bacillus circulans (586 aa)%2C fasta scores%3B opt: 1648 z-score: 1500.8 E(): 0%2C 43.0%25 identity in 584 aa overlap.%2C Contains PS01182 Glycosyl hydrolases family 35 active site;gbkey=CDS;gene=SC3A7.15;product=beta-galactosidase;protein_id=NP_630439.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7005396	7005434	.	+	.	ID=id8336;Dbxref=GeneID:1101788;Note=PS01182 Glycosyl hydrolases family 35 active site;gbkey=misc_feature;gene=SC3A7.15
NC_003888.3	RefSeq	stem_loop	7006757	7006801	.	+	.	ID=id8337;Note=hairpin loop with 18 /19 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7006807	7010892	.	-	.	ID=gene6410;Dbxref=GeneID:1101789;Name=SC3A7.16c;gbkey=Gene;gene=SC3A7.16c;gene_biotype=protein_coding;gene_synonym=SC3A7.16c;locus_tag=SCO6348
NC_003888.3	RefSeq	CDS	7006807	7010892	.	-	0	ID=cds6287;Parent=gene6410;Dbxref=Genbank:NP_630440.1,GeneID:1101789;Name=NP_630440.1;Note=SC3A7.16c%2C membrane protein%2C len: 1361 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3A7.16c;product=hypothetical protein;protein_id=NP_630440.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7011076	7011079	.	+	.	ID=id8338;Note=possible RBS upstream of SC3A7.17;gbkey=RBS
NC_003888.3	RefSeq	gene	7011086	7012171	.	+	.	ID=gene6411;Dbxref=GeneID:1101790;Name=SC3A7.17;gbkey=Gene;gene=SC3A7.17;gene_biotype=protein_coding;gene_synonym=SC3A7.17;locus_tag=SCO6349
NC_003888.3	RefSeq	CDS	7011086	7012171	.	+	0	ID=cds6288;Parent=gene6411;Dbxref=Genbank:NP_630441.1,GeneID:1101790;Name=NP_630441.1;Note=SC3A7.17%2C probable transcriptional regulator%2C len: 361 aa%3B similar to many of the lacI family e.g. LACI_ECOLI lactose operon repressor (360 aa)%2C fasta scores%3B opt: 518 z-score: 705.7 E(): 4.6e-32%2C 33.6%25 identity in 339 aa overlap. Contains helix-turn-helix motif from aa 27-48 (Score 1760%2C +5.18 SD)%2C and Pfam matches to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 35.20%2C E-value 1.9e-08 and to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family%2C score 78.80%2C E-value 1.1e-19;gbkey=CDS;gene=SC3A7.17;product=transcriptional regulator;protein_id=NP_630441.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7011155	7011238	.	+	.	ID=id8339;Dbxref=GeneID:1101790;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 35.20%2C E-value 1.9e-08;gbkey=misc_feature;gene=SC3A7.17
NC_003888.3	RefSeq	sequence_feature	7011329	7012045	.	+	.	ID=id8340;Dbxref=GeneID:1101790;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 78.80%2C E-value 1.1e-19;gbkey=misc_feature;gene=SC3A7.17
NC_003888.3	RefSeq	gene	7012204	7012788	.	-	.	ID=gene6412;Dbxref=GeneID:1101791;Name=SC3A7.18c;gbkey=Gene;gene=SC3A7.18c;gene_biotype=protein_coding;gene_synonym=SC3A7.18c;locus_tag=SCO6350
NC_003888.3	RefSeq	CDS	7012204	7012788	.	-	0	ID=cds6289;Parent=gene6412;Dbxref=Genbank:NP_630442.1,GeneID:1101791;Name=NP_630442.1;Note=SC3A7.18c%2C unknown%2C len: 194 aa;gbkey=CDS;gene=SC3A7.18c;product=hypothetical protein;protein_id=NP_630442.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7012856	7012862	.	+	.	ID=id8341;Note=possible RBS upstream of SC3A7.19;gbkey=RBS
NC_003888.3	RefSeq	gene	7012868	7013566	.	+	.	ID=gene6413;Dbxref=GeneID:1101792;Name=SC3A7.19;gbkey=Gene;gene=SC3A7.19;gene_biotype=protein_coding;gene_synonym=SC3A7.19;locus_tag=SCO6351
NC_003888.3	RefSeq	CDS	7012868	7013566	.	+	0	ID=cds6290;Parent=gene6413;Dbxref=Genbank:NP_630443.1,GeneID:1101792;Name=NP_630443.1;Note=SC3A7.19%2C unknown%2C len: 232 aa;gbkey=CDS;gene=SC3A7.19;product=hypothetical protein;protein_id=NP_630443.1;transl_table=11
NC_003888.3	RefSeq	gene	7013618	7014034	.	-	.	ID=gene6414;Dbxref=GeneID:1101793;Name=SC3A7.20c;gbkey=Gene;gene=SC3A7.20c;gene_biotype=protein_coding;gene_synonym=SC3A7.20c;locus_tag=SCO6352
NC_003888.3	RefSeq	CDS	7013618	7014034	.	-	0	ID=cds6291;Parent=gene6414;Dbxref=Genbank:NP_630444.1,GeneID:1101793;Name=NP_630444.1;Note=SC3A7.20c%2C unknown%2C len: 138 aa;gbkey=CDS;gene=SC3A7.20c;product=hypothetical protein;protein_id=NP_630444.1;transl_table=11
NC_003888.3	RefSeq	gene	7014907	7016286	.	-	.	ID=gene6415;Dbxref=GeneID:1101794;Name=SC3A7.21c;gbkey=Gene;gene=SC3A7.21c;gene_biotype=protein_coding;gene_synonym=SC3A7.21c;locus_tag=SCO6353
NC_003888.3	RefSeq	CDS	7014907	7016286	.	-	0	ID=cds6292;Parent=gene6415;Dbxref=Genbank:NP_630445.1,GeneID:1101794;Name=NP_630445.1;Note=SC3A7.21c%2C probable two-component sensor%2C len: 459 aa%3B similar to many e.g. COPS_PSESM sensor protein copS (EC 2.7.3.-) (487 aa)%2C fasta scores%3B opt: 310 z-score: 293.0 E(): 4.6e-09%2C 24.2%25 identity in 467 aa overlap. Contains a possible transmembrane domain near the N-terminus and Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 113.70%2C E-value 3.5e-30;gbkey=CDS;gene=SC3A7.21c;product=two-component sensor;protein_id=NP_630445.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7014916	7015515	.	-	.	ID=id8342;Dbxref=GeneID:1101794;Note=Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 113.70%2C E-value 3.5e-30;gbkey=misc_feature;gene=SC3A7.21c
NC_003888.3	RefSeq	gene	7016283	7016897	.	-	.	ID=gene6416;Dbxref=GeneID:1101795;Name=SC3A7.22c;gbkey=Gene;gene=SC3A7.22c;gene_biotype=protein_coding;gene_synonym=SC3A7.22c;locus_tag=SCO6354
NC_003888.3	RefSeq	CDS	7016283	7016897	.	-	0	ID=cds6293;Parent=gene6416;Dbxref=Genbank:NP_630446.1,GeneID:1101795;Name=NP_630446.1;Note=SC3A7.22c%2C probable two-component regulator%2C len: 204 aa%3B similar to many e.g. CUTR_STRLI transcriptional regulatory protein CutR (217 aa)%2C fasta scores%3B opt: 386 z-score: 526.1 E(): 4.7e-22%2C 38.1%25 identity in 202 aa overlap. Contains Pfam matches to entry PF00486 trans_reg_C%2C Transcriptional regulatory proteins%2C C terminal%2C score 69.70%2C E-value 1.8e-19 and to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 45.60%2C E-value 1.1e-09;gbkey=CDS;gene=SC3A7.22c;product=two-component regulator;protein_id=NP_630446.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7016298	7016513	.	-	.	ID=id8343;Dbxref=GeneID:1101795;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory proteins%2C C terminal%2C score 69.70%2C E-value 1.8e-19;gbkey=misc_feature;gene=SC3A7.22c
NC_003888.3	RefSeq	sequence_feature	7016607	7016897	.	-	.	ID=id8344;Dbxref=GeneID:1101795;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 45.60%2C E-value 1.1e-09;gbkey=misc_feature;gene=SC3A7.22c
NC_003888.3	RefSeq	gene	7016899	7017717	.	-	.	ID=gene6417;Dbxref=GeneID:1101796;Name=SC3A7.23c;gbkey=Gene;gene=SC3A7.23c;gene_biotype=protein_coding;gene_synonym=SC3A7.23c;locus_tag=SCO6355
NC_003888.3	RefSeq	CDS	7016899	7017717	.	-	0	ID=cds6294;Parent=gene6417;Dbxref=Genbank:NP_630447.1,GeneID:1101796;Name=NP_630447.1;Note=SC3A7.23c%2C probable integral membrane protein%2C len: 272 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3A7.23c;product=hypothetical protein;protein_id=NP_630447.1;transl_table=11
NC_003888.3	RefSeq	gene	7017714	7018319	.	-	.	ID=gene6418;Dbxref=GeneID:1101797;Name=SC3A7.24c;gbkey=Gene;gene=SC3A7.24c;gene_biotype=protein_coding;gene_synonym=SC3A7.24c;locus_tag=SCO6356
NC_003888.3	RefSeq	CDS	7017714	7018319	.	-	0	ID=cds6295;Parent=gene6418;Dbxref=Genbank:NP_630448.1,GeneID:1101797;Name=NP_630448.1;Note=SC3A7.24c%2C probable integral membrane protein%2C len: 201 aa%3B some similarity to e.g. BCRC_BACLI bacitracin transport permease bcrC (203 aa)%2C fasta scores%3B opt: 203 z-score: 285.3 E(): 1.2e-08%2C 29.3%25 identity in 147 aa overlap;gbkey=CDS;gene=SC3A7.24c;product=hypothetical protein;protein_id=NP_630448.1;transl_table=11
NC_003888.3	RefSeq	gene	7018316	7019002	.	-	.	ID=gene6419;Dbxref=GeneID:1101798;Name=SC3A7.25c;gbkey=Gene;gene=SC3A7.25c;gene_biotype=protein_coding;gene_synonym=SC3A7.25c;locus_tag=SCO6357
NC_003888.3	RefSeq	CDS	7018316	7019002	.	-	0	ID=cds6296;Parent=gene6419;Dbxref=Genbank:NP_630449.1,GeneID:1101798;Name=NP_630449.1;Note=SC3A7.25c%2C membrane protein%2C len: 228 aa%3B similar to many hypothetical proteins beloning to the DedA family e.g. DEDA_ECOLI DedA protein (DSG-1 protein) (219 aa)%2C fasta scores%3B opt: 354 z-score: 391.7 E(): 1.4e-14%2C 34.2%25 identity in 199 aa overlap. Contains Pfam match to entry PF00597 DedA%2C DedA family%2C score 75.40%2C E-value 1.2e-18. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3A7.25c;product=hypothetical protein;protein_id=NP_630449.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7018403	7018903	.	-	.	ID=id8345;Dbxref=GeneID:1101798;Note=Pfam match to entry PF00597 DedA%2C DedA family%2C score 75.40%2C E-value 1.2e-18;gbkey=misc_feature;gene=SC3A7.25c
NC_003888.3	RefSeq	gene	7019120	7019509	.	+	.	ID=gene6420;Dbxref=GeneID:1101799;Name=SC3A7.26;gbkey=Gene;gene=SC3A7.26;gene_biotype=protein_coding;gene_synonym=SC3A7.26;locus_tag=SCO6358
NC_003888.3	RefSeq	CDS	7019120	7019509	.	+	0	ID=cds6297;Parent=gene6420;Dbxref=Genbank:NP_630450.1,GeneID:1101799;Name=NP_630450.1;Note=SC3A7.26%2C unknown%2C len: 129 aa%3B similar to hypothetical proteins from M. tuberculosis and M. leprae e.g. M. tuberculosis TR:O32909 (EMBL:Z83859) MTCY359.27 (142 aa)%2C fasta scores%3B opt: 201 z-score: 269.6 E(): 9.1e-08%2C 39.3%25 identity in 112 aa overlap;gbkey=CDS;gene=SC3A7.26;product=hypothetical protein;protein_id=NP_630450.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7019417	7019420	.	+	.	ID=id8346;Dbxref=GeneID:1101799;Note=end of true overlap wth cosmid 10H5;gbkey=misc_feature;gene=SC3A7.26
NC_003888.3	RefSeq	gene	7019506	7020435	.	+	.	ID=gene6421;Dbxref=GeneID:1101800;Name=SC3A7.27;gbkey=Gene;gene=SC3A7.27;gene_biotype=protein_coding;gene_synonym=SC3A7.27;locus_tag=SCO6359
NC_003888.3	RefSeq	CDS	7019506	7020435	.	+	0	ID=cds6298;Parent=gene6421;Dbxref=Genbank:NP_630451.1,GeneID:1101800;Name=NP_630451.1;Note=SC3A7.27%2C possible integral membrane protein%2C len: 309 aa%3B similar to hypothetical proteins from M. tuberculosis and M. leprae e.g. M. tuberculosis TR:P95164 (EMBL:Z83859) MTCY359.28 (322 aa)%2C fasta scores%3B opt: 196 z-score: 298.4 E(): 2.3e-09%2C 33.7%25 identity in 267 aa overlap;gbkey=CDS;gene=SC3A7.27;product=hypothetical protein;protein_id=NP_630451.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7020923	7020926	.	+	.	ID=id8347;Note=possible RBS upstream of SC3A7.28;gbkey=RBS
NC_003888.3	RefSeq	gene	7020934	7021872	.	+	.	ID=gene6422;Dbxref=GeneID:1101801;Name=SC3A7.28;gbkey=Gene;gene=SC3A7.28;gene_biotype=protein_coding;gene_synonym=SC3A7.28;locus_tag=SCO6360
NC_003888.3	RefSeq	CDS	7020934	7021872	.	+	0	ID=cds6299;Parent=gene6422;Dbxref=Genbank:NP_630452.1,GeneID:1101801;Name=NP_630452.1;Note=SC3A7.28%2C probable ABC transporter ATP-binding protein%2C similar to many%2C e.g. BCRA_BACLI bacitracin transport ATP-binding protein bcrA (306 aa)%2C fasta scores%3B opt: 540 z-score: 640.6 E(): 2e-28%2C 34.9%25 identity in 298 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop) and Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 137.30%2C E-value 2.7e-37;gbkey=CDS;gene=SC3A7.28;product=ABC transporter ATP-binding protein;protein_id=NP_630452.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7021012	7021542	.	+	.	ID=id8348;Dbxref=GeneID:1101801;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 137.30%2C E-value 2.7e-37;gbkey=misc_feature;gene=SC3A7.28
NC_003888.3	RefSeq	sequence_feature	7021033	7021056	.	+	.	ID=id8349;Dbxref=GeneID:1101801;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3A7.28
NC_003888.3	RefSeq	ribosome_entry_site	7021859	7021863	.	+	.	ID=id8350;Dbxref=GeneID:1101801;Note=possible RBS upstream of SC3A7.29;gbkey=RBS;gene=SC3A7.28
NC_003888.3	RefSeq	gene	7021869	7022708	.	+	.	ID=gene6423;Dbxref=GeneID:1101802;Name=SC3A7.29;gbkey=Gene;gene=SC3A7.29;gene_biotype=protein_coding;gene_synonym=SC3A7.29;locus_tag=SCO6361
NC_003888.3	RefSeq	CDS	7021869	7022708	.	+	0	ID=cds6300;Parent=gene6423;Dbxref=Genbank:NP_630453.1,GeneID:1101802;Name=NP_630453.1;Note=SC3A7.29%2C probable integral membrane protein%2C len: 279 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3A7.29;product=hypothetical protein;protein_id=NP_630453.1;transl_table=11
NC_003888.3	RefSeq	gene	7022727	7024016	.	+	.	ID=gene6424;Dbxref=GeneID:1101803;Name=SC3A7.30;gbkey=Gene;gene=SC3A7.30;gene_biotype=protein_coding;gene_synonym=SC3A7.30;locus_tag=SCO6362
NC_003888.3	RefSeq	CDS	7022727	7024016	.	+	0	ID=cds6301;Parent=gene6424;Dbxref=Genbank:NP_630454.1,GeneID:1101803;Name=NP_630454.1;Note=SC3A7.30%2C probable two-component sensor%2C len: 429 aa%3B similar to many e.g. UHPB_SALTY sensor protein UhpB (500 aa)%2C fasta scores%3B opt: 238 z-score: 263.3 E(): 2.1e-07%2C 30.7%25 identity in 358 aa overlap. Contains six probable hydrophobic transmembrane domains in N-terminus;gbkey=CDS;gene=SC3A7.30;product=two-component sensor;protein_id=NP_630454.1;transl_table=11
NC_003888.3	RefSeq	gene	7024013	7024681	.	+	.	ID=gene6425;Dbxref=GeneID:1101804;Name=SC3A7.31;gbkey=Gene;gene=SC3A7.31;gene_biotype=protein_coding;gene_synonym=SC3A7.31;locus_tag=SCO6363
NC_003888.3	RefSeq	CDS	7024013	7024681	.	+	0	ID=cds6302;Parent=gene6425;Dbxref=Genbank:NP_630455.1,GeneID:1101804;Name=NP_630455.1;Note=SC3A7.31%2C probable two-component regulator%2C len: 222 aa%3B similar to many e.g. DEGU_BACBR transcriptional regulatory protein DegU (236 aa)%2C fasta scores%3B opt: 437 z-score: 645.6 E(): 1e-28%2C 35.4%25 identity in 223 aa overlap. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature%2C helix-turn-helix motif at aa 173-194 (Score 1074%2C +2.84 SD) and Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 125.90%2C E-value 7.6e-34 and to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 70.00%2C E-value 5.1e-17;gbkey=CDS;gene=SC3A7.31;product=two-component regulator;protein_id=NP_630455.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7024016	7024357	.	+	.	ID=id8351;Dbxref=GeneID:1101804;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 125.90%2C E-value 7.6e-34;gbkey=misc_feature;gene=SC3A7.31
NC_003888.3	RefSeq	sequence_feature	7024472	7024669	.	+	.	ID=id8352;Dbxref=GeneID:1101804;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 70.00%2C E-value 5.1e-17;gbkey=misc_feature;gene=SC3A7.31
NC_003888.3	RefSeq	sequence_feature	7024523	7024606	.	+	.	ID=id8353;Dbxref=GeneID:1101804;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC3A7.31
NC_003888.3	RefSeq	gene	7024745	7025536	.	-	.	ID=gene6426;Dbxref=GeneID:1101805;Name=SC3A7.32c;gbkey=Gene;gene=SC3A7.32c;gene_biotype=protein_coding;gene_synonym=SC3A7.32c;locus_tag=SCO6364
NC_003888.3	RefSeq	CDS	7024745	7025536	.	-	0	ID=cds6303;Parent=gene6426;Dbxref=Genbank:NP_630456.1,GeneID:1101805;Name=NP_630456.1;Note=SC3A7.32c%2C probable two-component regulator%2C len: 263 aa%3B similar to many e.g. PHOP_BACSU alkaline phosphatase synthesis transcriptional regulator (240 aa)%2C fasta scores%3B opt: 452 z-score: 542.7 E(): 5.6e-23%2C 34.2%25 identity in 237 aa overlap. Contains Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 107.60%2C E-value 2.4e-28 and to entry PF00486 trans_reg_C%2C Transcriptional regulatory proteins%2C C terminal%2C score 58.80%2C E-value 3.3e-16;gbkey=CDS;gene=SC3A7.32c;product=two-component regulator;protein_id=NP_630456.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7024763	7024999	.	-	.	ID=id8354;Dbxref=GeneID:1101805;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory proteins%2C C terminal%2C score 58.80%2C E-value 3.3e-16;gbkey=misc_feature;gene=SC3A7.32c
NC_003888.3	RefSeq	sequence_feature	7025105	7025440	.	-	.	ID=id8355;Dbxref=GeneID:1101805;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 107.60%2C E-value 2.4e-28;gbkey=misc_feature;gene=SC3A7.32c
NC_003888.3	RefSeq	gene	7025526	7028168	.	-	.	ID=gene6427;Dbxref=GeneID:1101806;Name=SC3A7.33c;gbkey=Gene;gene=SC3A7.33c;gene_biotype=protein_coding;gene_synonym=SC3A7.33c,SC4A2.01c;locus_tag=SCO6365
NC_003888.3	RefSeq	CDS	7025526	7028168	.	-	0	ID=cds6304;Parent=gene6427;Dbxref=Genbank:NP_733699.1,GeneID:1101806;Name=NP_733699.1;Note=SC4A2.01c%2C probable integral membrane protein%2C partial CDS%2C len: > 653 aa%3B overlaps and extends SC3A7.33c~SC3A7.33c%2C unknown%2C partial CDS%2C len: >259 aa;gbkey=CDS;gene=SC3A7.33c;product=hypothetical protein;protein_id=NP_733699.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7025543	7025547	.	-	.	ID=id8356;Dbxref=GeneID:1101806;Note=possible RBS upstream of SC3A7.32c;gbkey=RBS;gene=SC3A7.33c
NC_003888.3	RefSeq	gene	7028165	7028854	.	-	.	ID=gene6428;Dbxref=GeneID:1101807;Name=SC4A2.02c;gbkey=Gene;gene=SC4A2.02c;gene_biotype=protein_coding;gene_synonym=SC4A2.02c;locus_tag=SCO6366
NC_003888.3	RefSeq	CDS	7028165	7028854	.	-	0	ID=cds6305;Parent=gene6428;Dbxref=Genbank:NP_630457.1,GeneID:1101807;Name=NP_630457.1;Note=SC4A2.02c%2C probable ABC transporter ATP-binding protein%2C len: 229 aa%3B similar to many e.g. CYSA_SYNP7 sulfate transport atp-binding protein cysA (344 aa)%2C fasta scores%3B opt: 422 z-score: 523.3 E(): 6.7e-22%2C 44.9%25 identity in 176 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop)%2C PS00211 ABC transporters family signature and fam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 160.00%2C E-value 3.9e-44;gbkey=CDS;gene=SC4A2.02c;product=ABC transporter ATP-binding protein;protein_id=NP_630457.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7028175	7028178	.	-	.	ID=id8357;Dbxref=GeneID:1101807;Note=possible RBS upstream of SC4A2.01c;gbkey=RBS;gene=SC4A2.02c
NC_003888.3	RefSeq	sequence_feature	7028234	7028746	.	-	.	ID=id8358;Dbxref=GeneID:1101807;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 160.00%2C E-value 3.9e-44;gbkey=misc_feature;gene=SC4A2.02c
NC_003888.3	RefSeq	sequence_feature	7028405	7028449	.	-	.	ID=id8359;Dbxref=GeneID:1101807;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC4A2.02c
NC_003888.3	RefSeq	sequence_feature	7028702	7028725	.	-	.	ID=id8360;Dbxref=GeneID:1101807;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4A2.02c
NC_003888.3	RefSeq	gene	7028841	7029578	.	-	.	ID=gene6429;Dbxref=GeneID:1101808;Name=SC4A2.03c;gbkey=Gene;gene=SC4A2.03c;gene_biotype=protein_coding;gene_synonym=SC4A2.03c;locus_tag=SCO6367
NC_003888.3	RefSeq	CDS	7028841	7029578	.	-	0	ID=cds6306;Parent=gene6429;Dbxref=Genbank:NP_630458.1,GeneID:1101808;Name=NP_630458.1;Note=SC4A2.03c%2C probable ABC transporter ATP-binding protein%2C len: 245 aa%3B similar to many e.g. YF08_METJA hypothetical ABC transporter ATP-binding protein (224 aa)%2C fasta scores%3B opt: 522 z-score: 604.9 E(): 1.9e-26%2C 40.6%25 identity in 219 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop)%2C PS00211 ABC transporters family signature and Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 175.60%2C E-value 8.3e-49;gbkey=CDS;gene=SC4A2.03c;product=ABC transporter ATP-binding protein;protein_id=NP_630458.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7028862	7028865	.	-	.	ID=id8361;Dbxref=GeneID:1101808;Note=possible RBS upstream of SC4A2.02c;gbkey=RBS;gene=SC4A2.03c
NC_003888.3	RefSeq	sequence_feature	7028904	7029452	.	-	.	ID=id8362;Dbxref=GeneID:1101808;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 175.60%2C E-value 8.3e-49;gbkey=misc_feature;gene=SC4A2.03c
NC_003888.3	RefSeq	sequence_feature	7029084	7029128	.	-	.	ID=id8363;Dbxref=GeneID:1101808;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC4A2.03c
NC_003888.3	RefSeq	sequence_feature	7029408	7029431	.	-	.	ID=id8364;Dbxref=GeneID:1101808;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4A2.03c
NC_003888.3	RefSeq	gene	7029575	7030195	.	-	.	ID=gene6430;Dbxref=GeneID:1101809;Name=SC4A2.04c;gbkey=Gene;gene=SC4A2.04c;gene_biotype=protein_coding;gene_synonym=SC4A2.04c;locus_tag=SCO6368
NC_003888.3	RefSeq	CDS	7029575	7030195	.	-	0	ID=cds6307;Parent=gene6430;Dbxref=Genbank:NP_630459.1,GeneID:1101809;Name=NP_630459.1;Note=SC4A2.04c%2C probable lipoprotein%2C len: 206 aa%3B similar to TR:Q98E07 (EMBL:AP003004) Rhizobium loti (Mesorhizobium loti)  lipoprotein MLR4460%2C 201 aa%3B fasta scores: opt: 472 Z-score: 495.8 E(): 5.6e-20%3B 40.933%25 identity in 193 aa overlap. Contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC4A2.04c;product=lipoprotein;protein_id=NP_630459.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7030127	7030159	.	-	.	ID=id8365;Dbxref=GeneID:1101809;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4A2.04c
NC_003888.3	RefSeq	ribosome_entry_site	7030204	7030208	.	-	.	ID=id8366;Note=possible RBS upstream of SC4A2.04c;gbkey=RBS
NC_003888.3	RefSeq	gene	7030354	7031664	.	+	.	ID=gene6431;Dbxref=GeneID:1101810;Name=SC4A2.05;gbkey=Gene;gene=SC4A2.05;gene_biotype=protein_coding;gene_synonym=SC4A2.05;locus_tag=SCO6369
NC_003888.3	RefSeq	CDS	7030354	7031664	.	+	0	ID=cds6308;Parent=gene6431;Dbxref=Genbank:NP_630460.1,GeneID:1101810;Name=NP_630460.1;Note=SC4A2.05%2C probable two-component sensor%2C len: 436 aa%3B similar to many e.g. CUTS_STRLI CtS protein (414 aa)%2C fasta scores%3B opt: 226 z-score: 309.1 E(): 5.8e-10%2C 32.9%25 identity in 316 aa overlap. Contains two probable transmembrane domains in the N-terminal half and Pfam matches to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 42.70%2C E-value 8.2e-09 and to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 38.00%2C E-value 1.7e-07;gbkey=CDS;gene=SC4A2.05;product=two-component sensor;protein_id=NP_630460.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7030792	7031001	.	+	.	ID=id8367;Dbxref=GeneID:1101810;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 42.70%2C E-value 8.2e-09;gbkey=misc_feature;gene=SC4A2.05
NC_003888.3	RefSeq	sequence_feature	7031041	7031634	.	+	.	ID=id8368;Dbxref=GeneID:1101810;Note=Pfam match to entry PF00512 signal%2C Signal carboxyl-terminal domain%2C score 38.00%2C E-value 1.7e-07;gbkey=misc_feature;gene=SC4A2.05
NC_003888.3	RefSeq	gene	7031672	7032706	.	-	.	ID=gene6432;Dbxref=GeneID:1101811;Name=SC4A2.06c;gbkey=Gene;gene=SC4A2.06c;gene_biotype=protein_coding;gene_synonym=SC4A2.06c;locus_tag=SCO6370
NC_003888.3	RefSeq	CDS	7031672	7032706	.	-	0	ID=cds6309;Parent=gene6432;Dbxref=Genbank:NP_630461.1,GeneID:1101811;Name=NP_630461.1;Note=SC4A2.06c%2C probable integral membrane protein%2C len: 344 aa%3B slight similarity to e.g. TR:O34524 (EMBL:AF027868) B. subtilis  transporter yocS (321 aa)%2C fasta scores%3B opt: 141 z-score: 232.8 E(): 1e-05%2C 23.1%25 identity in 324 aa overlap;gbkey=CDS;gene=SC4A2.06c;product=hypothetical protein;protein_id=NP_630461.1;transl_table=11
NC_003888.3	RefSeq	gene	7032798	7033637	.	+	.	ID=gene6433;Dbxref=GeneID:1101812;Name=SC4A2.07;gbkey=Gene;gene=SC4A2.07;gene_biotype=protein_coding;gene_synonym=SC4A2.07;locus_tag=SCO6371
NC_003888.3	RefSeq	CDS	7032798	7033637	.	+	0	ID=cds6310;Parent=gene6433;Dbxref=Genbank:NP_630462.1,GeneID:1101812;Name=NP_630462.1;Note=SC4A2.07%2C probable integral membrane protein%2C len: 279 aa%3B similar to TR:Q98E10 (EMBL:AP003004) Rhizobium loti (Mesorhizobium loti) integral membrane protein MLR4456 309 aa%3B fasta scores: opt: 899 Z-score: 1025.7 E(): 1.7e-49%3B 56.126%25 identity in 253 aa overlap;gbkey=CDS;gene=SC4A2.07;product=hypothetical protein;protein_id=NP_630462.1;transl_table=11
NC_003888.3	RefSeq	gene	7033729	7033962	.	+	.	ID=gene6434;Dbxref=GeneID:1101813;Name=SC4A2.08;gbkey=Gene;gene=SC4A2.08;gene_biotype=protein_coding;gene_synonym=SC4A2.08;locus_tag=SCO6372
NC_003888.3	RefSeq	CDS	7033729	7033962	.	+	0	ID=cds6311;Parent=gene6434;Dbxref=Genbank:NP_630463.1,GeneID:1101813;Name=NP_630463.1;Note=SC4A2.08%2C questionable ORF%2C len: 77 aa;gbkey=CDS;gene=SC4A2.08;product=hypothetical protein;protein_id=NP_630463.1;transl_table=11
NC_003888.3	RefSeq	gene	7034266	7035663	.	-	.	ID=gene6435;Dbxref=GeneID:1101814;Name=SC4A2.09;gbkey=Gene;gene=SC4A2.09;gene_biotype=protein_coding;gene_synonym=SC4A2.09;locus_tag=SCO6373
NC_003888.3	RefSeq	CDS	7034266	7035663	.	-	0	ID=cds6312;Parent=gene6435;Dbxref=Genbank:NP_630464.1,GeneID:1101814;Name=NP_630464.1;Note=SC4A2.09%2C probable integral membrane protein%2C len: 465 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4A2.09;product=hypothetical protein;protein_id=NP_630464.1;transl_table=11
NC_003888.3	RefSeq	gene	7035788	7037224	.	-	.	ID=gene6436;Dbxref=GeneID:1101815;Name=SC4A2.10c;gbkey=Gene;gene=SC4A2.10c;gene_biotype=protein_coding;gene_synonym=SC4A2.10c;locus_tag=SCO6374
NC_003888.3	RefSeq	CDS	7035788	7037224	.	-	0	ID=cds6313;Parent=gene6436;Dbxref=Genbank:NP_630465.1,GeneID:1101815;Name=NP_630465.1;Note=SC4A2.10c%2C probable sugar transferase%2C len: 478%3B similar to many bacterial hypothetical proteins and to TR:O21943 (EMBL:AF021347) bactoprenol glucosyl transferase from bacteriophage SFII (309 aa)%2C fasta scores%3B opt: 809 z-score: 925.5 E(): 0%2C 40.9%25 identity in 303 aa overlap. Contains a C-terminal extension with four additional transmembrane domains not present in similar proteins and Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 46.50%2C E-value 6.1e-10;gbkey=CDS;gene=SC4A2.10c;product=sugar transferase;protein_id=NP_630465.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7036715	7037206	.	-	.	ID=id8369;Dbxref=GeneID:1101815;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases%2C score 46.50%2C E-value 6.1e-10;gbkey=misc_feature;gene=SC4A2.10c
NC_003888.3	RefSeq	ribosome_entry_site	7037231	7037235	.	-	.	ID=id8370;Note=possible RBS upstream of SC4A2.10c;gbkey=RBS
NC_003888.3	RefSeq	gene	7037737	7038399	.	-	.	ID=gene6437;Dbxref=GeneID:1101816;Name=SC4A2.11c;gbkey=Gene;gene=SC4A2.11c;gene_biotype=protein_coding;gene_synonym=SC4A2.11c;locus_tag=SCO6375
NC_003888.3	RefSeq	CDS	7037737	7038399	.	-	0	ID=cds6314;Parent=gene6437;Dbxref=Genbank:NP_630466.1,GeneID:1101816;Name=NP_630466.1;Note=SC4A2.11c%2C probable hypothetical protein%2C len: 220 aa%3B similar to a set of Mycobacterial  antigens e.g. MP83_MYCTU cell surface lipoprotein Mpt83 precursor (239 aa)%2C fasta scores%3B opt: 376 z-score: 505.8 E(): 6.4e-21%2C 35.6%25 identity in 222 aa overlap;gbkey=CDS;gene=SC4A2.11c;product=hypothetical protein;protein_id=NP_630466.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7038406	7038409	.	-	.	ID=id8371;Note=possible RBS upstream of SC4A2.11c;gbkey=RBS
NC_003888.3	RefSeq	gene	7038757	7039656	.	+	.	ID=gene6438;Dbxref=GeneID:1101817;Name=SC4A2.12;gbkey=Gene;gene=SC4A2.12;gene_biotype=protein_coding;gene_synonym=SC4A2.12;locus_tag=SCO6376
NC_003888.3	RefSeq	CDS	7038757	7039656	.	+	0	ID=cds6315;Parent=gene6438;Dbxref=Genbank:NP_630467.1,GeneID:1101817;Name=NP_630467.1;Note=SC4A2.12%2C probable integral membrane protein%2C len: 299 aa;gbkey=CDS;gene=SC4A2.12;product=hypothetical protein;protein_id=NP_630467.1;transl_table=11
NC_003888.3	RefSeq	gene	7039699	7041054	.	-	.	ID=gene6439;Dbxref=GeneID:1101818;Name=SC4A2.13c;gbkey=Gene;gene=SC4A2.13c;gene_biotype=protein_coding;gene_synonym=SC4A2.13c;locus_tag=SCO6377
NC_003888.3	RefSeq	CDS	7039699	7041054	.	-	0	ID=cds6316;Parent=gene6439;Dbxref=Genbank:NP_630468.1,GeneID:1101818;Name=NP_630468.1;Note=SC4A2.13c%2C probable lipoprotein%2C len: 451 aa%3B contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC4A2.13c;product=lipoprotein;protein_id=NP_630468.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7040962	7040994	.	-	.	ID=id8372;Dbxref=GeneID:1101818;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4A2.13c
NC_003888.3	RefSeq	gene	7041611	7041910	.	-	.	ID=gene6440;Dbxref=GeneID:1101819;Name=SC4A2.14c;gbkey=Gene;gene=SC4A2.14c;gene_biotype=protein_coding;gene_synonym=SC4A2.14c;locus_tag=SCO6378
NC_003888.3	RefSeq	CDS	7041611	7041910	.	-	0	ID=cds6317;Parent=gene6440;Dbxref=Genbank:NP_630469.1,GeneID:1101819;Name=NP_630469.1;Note=SC4A2.14c%2C small hydrophobic protein%2C len: 99 aa%3B contains segment of similarity to BCRC_BACLI bacitracin transport permease BcrC (203 aa)%2C fasta scores%3B opt: 123 z-score: 260.1 E(): 3.1e-07%2C 60.6%25 identity in 33 aa overlap. Similar in parts to downstream ORF SC3A7.24c (57.0%25 identity in 114 aa overlap). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4A2.14c;product=hypothetical protein;protein_id=NP_630469.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7041615	7042751	.	+	.	ID=id8373;Note=approx 75%25 match to St3A7 from 26600 to 27793;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7042054	7042737	.	-	.	ID=gene6441;Dbxref=GeneID:1101820;Name=SC4A2.15c;gbkey=Gene;gene=SC4A2.15c;gene_biotype=protein_coding;gene_synonym=SC4A2.15c;locus_tag=SCO6379
NC_003888.3	RefSeq	CDS	7042054	7042737	.	-	0	ID=cds6318;Parent=gene6441;Dbxref=Genbank:NP_630470.1,GeneID:1101820;Name=NP_630470.1;Note=SC4A2.15c%2C membrane protein%2C len: 227 aa%3B similar to many members of the DedA family of hypothetical proteins e.g. DEDA_ECOLI DedA protein (DSG-1 protein) (219 aa)%2C fasta scores%3B opt: 375 z-score: 421.2 E(): 3.3e-16%2C 36.4%25 identity in 209 aa overlap. Highly similar to downstream ORF SC3A7.25c (78.9%25 identity in 213 aa overlap). Contains Pfam match to entry PF00597 DedA%2C DedA family%2C score 62.50%2C E-value 9e-15. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4A2.15c;product=hypothetical protein;protein_id=NP_630470.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7042156	7042656	.	-	.	ID=id8374;Dbxref=GeneID:1101820;Note=Pfam match to entry PF00597 DedA%2C DedA family%2C score 62.50%2C E-value 9e-15;gbkey=misc_feature;gene=SC4A2.15c
NC_003888.3	RefSeq	gene	7043084	7043440	.	-	.	ID=gene6442;Dbxref=GeneID:1101821;Name=SC4A2.16c;gbkey=Gene;gene=SC4A2.16c;gene_biotype=protein_coding;gene_synonym=SC4A2.16c;locus_tag=SCO6380
NC_003888.3	RefSeq	CDS	7043084	7043440	.	-	0	ID=cds6319;Parent=gene6442;Dbxref=Genbank:NP_630471.1,GeneID:1101821;Name=NP_630471.1;Note=SC4A2.16c%2C unknown%2C len: 118 aa;gbkey=CDS;gene=SC4A2.16c;product=hypothetical protein;protein_id=NP_630471.1;transl_table=11
NC_003888.3	RefSeq	gene	7043724	7045067	.	-	.	ID=gene6443;Dbxref=GeneID:1101822;Name=SC4A2.17c;gbkey=Gene;gene=SC4A2.17c;gene_biotype=protein_coding;gene_synonym=SC4A2.17c;locus_tag=SCO6381
NC_003888.3	RefSeq	CDS	7043724	7045067	.	-	0	ID=cds6320;Parent=gene6443;Dbxref=Genbank:NP_630472.1,GeneID:1101822;Name=NP_630472.1;Note=SC4A2.17c%2C probable lipoprotein%2C len: 447 aa%3B contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC4A2.17c;product=lipoprotein;protein_id=NP_630472.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7044999	7045031	.	-	.	ID=id8375;Dbxref=GeneID:1101822;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4A2.17c
NC_003888.3	RefSeq	ribosome_entry_site	7045076	7045080	.	-	.	ID=id8376;Note=possible RBS upstream of SC4A2.17c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7046613	7046616	.	+	.	ID=id8377;Note=possible RBS upstream of SC3C8.01;gbkey=RBS
NC_003888.3	RefSeq	gene	7046618	7047526	.	+	.	ID=gene6444;Dbxref=GeneID:1101823;Name=SC3C8.01;gbkey=Gene;gene=SC3C8.01;gene_biotype=protein_coding;gene_synonym=SC3C8.01;locus_tag=SCO6382
NC_003888.3	RefSeq	CDS	7046618	7047526	.	+	0	ID=cds6321;Parent=gene6444;Dbxref=Genbank:NP_630473.1,GeneID:1101823;Name=NP_630473.1;Note=SC3C8.01%2C possible hypothetical protein%2C len: 302 aa%3B some similarity to M. tuberculosis lipoprotein YX36_MYCTU MTCY274.36 (343 aa)%2C fasta scores%3B opt: 201 z-score:255.1 E(): 5.7e-07%2C 24.9%25 identity in 257 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC3C8.01;product=hypothetical protein;protein_id=NP_630473.1;transl_table=11
NC_003888.3	RefSeq	gene	7048443	7049126	.	-	.	ID=gene6445;Dbxref=GeneID:1101824;Name=SC3C8.02c;gbkey=Gene;gene=SC3C8.02c;gene_biotype=protein_coding;gene_synonym=SC3C8.02c;locus_tag=SCO6383
NC_003888.3	RefSeq	CDS	7048443	7049126	.	-	0	ID=cds6322;Parent=gene6445;Dbxref=Genbank:NP_630474.1,GeneID:1101824;Name=NP_630474.1;Note=SC3C8.02c%2C probable integral membrane protein%2C len: 227 aa;gbkey=CDS;gene=SC3C8.02c;product=hypothetical protein;protein_id=NP_630474.1;transl_table=11
NC_003888.3	RefSeq	gene	7049382	7051151	.	-	.	ID=gene6446;Dbxref=GeneID:1101825;Name=SC3C8.03c;gbkey=Gene;gene=SC3C8.03c;gene_biotype=protein_coding;gene_synonym=SC3C8.03c;locus_tag=SCO6384
NC_003888.3	RefSeq	CDS	7049382	7051151	.	-	0	ID=cds6323;Parent=gene6446;Dbxref=Genbank:NP_630475.1,GeneID:1101825;Name=NP_630475.1;Note=SC3C8.03c%2C probable integral membrane lysyl-tRNA synthetase%2C len: 589 aa%3B similar to SW:P94974 (SYK2_MYCTU) probable lysyl-tRNA synthetase MTCY06H11.04C (1172 aa)%2C fasta scores%3B opt: 1426%2C z-score: 1642.9%2C E(): 0%2C 44.6%25 identity in 585 aa overlap. Contains TTA leucine codon%3B possible target for action of bldA;gbkey=CDS;gene=SC3C8.03c;product=integral membrane lysyl-tRNA synthetase;protein_id=NP_630475.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7050405	7050407	.	-	.	ID=id8378;Dbxref=GeneID:1101825;Note=TTA leucine codon%3B possible target for action of bldA;gbkey=misc_feature;gene=SC3C8.03c
NC_003888.3	RefSeq	gene	7051526	7053460	.	-	.	ID=gene6447;Dbxref=GeneID:1101826;Name=SC3C8.04c;gbkey=Gene;gene=SC3C8.04c;gene_biotype=protein_coding;gene_synonym=SC3C8.04c;locus_tag=SCO6385
NC_003888.3	RefSeq	CDS	7051526	7053460	.	-	0	ID=cds6324;Parent=gene6447;Dbxref=Genbank:NP_630476.1,GeneID:1101826;Name=NP_630476.1;Note=SC3C8.04c%2C probable integral membrane protein%2C len: 644 aa%3B similar to hypothetical proteins e.g. M. tuberculosis TR:O07192 (EMBL:Z96072) MTCY05A6.11C (647 aa)%2C fassta scores%3B opt: 916 z-score: 1168.8 E(): 0%2C 35.3%25 identity in 666 aa overlap. Also similar to S.coelicolor SC10A5.05 (E():0%2C 34.8%25 identity in 669 aa overlap);gbkey=CDS;gene=SC3C8.04c;product=hypothetical protein;protein_id=NP_630476.1;transl_table=11
NC_003888.3	RefSeq	gene	7053632	7054015	.	+	.	ID=gene6448;Dbxref=GeneID:1101827;Name=SC3C8.05;gbkey=Gene;gene=SC3C8.05;gene_biotype=protein_coding;gene_synonym=SC3C8.05;locus_tag=SCO6386
NC_003888.3	RefSeq	CDS	7053632	7054015	.	+	0	ID=cds6325;Parent=gene6448;Dbxref=Genbank:NP_630477.1,GeneID:1101827;Name=NP_630477.1;Note=SC3C8.05%2C unknown%2C questionable ORF%2C len: 127 aa%3B contains TTA leucine codon%3B possible target for action of bldA;gbkey=CDS;gene=SC3C8.05;product=hypothetical protein;protein_id=NP_630477.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7053650	7053652	.	+	.	ID=id8379;Dbxref=GeneID:1101827;Note=TTA leucine codon%3B possible target for action of bldA;gbkey=misc_feature;gene=SC3C8.05
NC_003888.3	RefSeq	gene	7054118	7054684	.	+	.	ID=gene6449;Dbxref=GeneID:1101828;Name=SC3C8.06;gbkey=Gene;gene=SC3C8.06;gene_biotype=protein_coding;gene_synonym=SC3C8.06;locus_tag=SCO6387
NC_003888.3	RefSeq	CDS	7054118	7054684	.	+	0	ID=cds6326;Parent=gene6449;Dbxref=Genbank:NP_630478.1,GeneID:1101828;Name=NP_630478.1;Note=SC3C8.06%2C questionable ORF%2C len: 188 aa%3B similar to the C-terminal regions of various transposases%2C e.g. TR:Q9FBV8 (EMBL:AL391338) Streptomyces coelicolor transposase SC8E7.24c%2C 549 aa%3B fasta scores: opt: 493 Z-score: 531.0 E(): 6e-22%3B 46.552%25 identity in 174 aa overlap. Contains TTA leucine codon%2C possible target for action of bldA;gbkey=CDS;gene=SC3C8.06;product=hypothetical protein;protein_id=NP_630478.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7054250	7054252	.	+	.	ID=id8380;Dbxref=GeneID:1101828;Note=TTA leucine codon%3B possible target for action of bldA;gbkey=misc_feature;gene=SC3C8.06
NC_003888.3	RefSeq	gene	7054965	7055324	.	-	.	ID=gene6450;Dbxref=GeneID:1101829;Name=SC3C8.07c;gbkey=Gene;gene=SC3C8.07c;gene_biotype=protein_coding;gene_synonym=SC3C8.07c;locus_tag=SCO6388
NC_003888.3	RefSeq	CDS	7054965	7055324	.	-	0	ID=cds6327;Parent=gene6450;Dbxref=Genbank:NP_630479.1,GeneID:1101829;Name=NP_630479.1;Note=SC3C8.07c%2C unknown%2C len: 119 aa;gbkey=CDS;gene=SC3C8.07c;product=hypothetical protein;protein_id=NP_630479.1;transl_table=11
NC_003888.3	RefSeq	gene	7055321	7055713	.	-	.	ID=gene6451;Dbxref=GeneID:1101830;Name=SC3C8.08c;gbkey=Gene;gene=SC3C8.08c;gene_biotype=protein_coding;gene_synonym=SC3C8.08c;locus_tag=SCO6389
NC_003888.3	RefSeq	CDS	7055321	7055713	.	-	0	ID=cds6328;Parent=gene6451;Dbxref=Genbank:NP_630480.1,GeneID:1101830;Name=NP_630480.1;Note=SC3C8.08c%2C unknown%2C len: 130 aa;gbkey=CDS;gene=SC3C8.08c;product=hypothetical protein;protein_id=NP_630480.1;transl_table=11
NC_003888.3	RefSeq	gene	7056189	7057292	.	+	.	ID=gene6452;Dbxref=GeneID:1101831;Name=SC3C8.09;gbkey=Gene;gene=SC3C8.09;gene_biotype=protein_coding;gene_synonym=SC3C8.09;locus_tag=SCO6390
NC_003888.3	RefSeq	CDS	7056189	7057292	.	+	0	ID=cds6329;Parent=gene6452;Dbxref=Genbank:NP_630481.1,GeneID:1101831;Name=NP_630481.1;Note=SC3C8.09%2C probable integral membrane protein%2C len: 367 aa%3B similar to a hypothetical protein from M. tuberculosis Y07S_MYCTU MTCY02B10.28c (653 aa)%2C fatsta scores%3B opt: 144 z-score: 314.2 E(): 2.9e-10%2C 30.6%25 identity in 281 aa overlap. Also similar to S. coelicolor SC7H1.03c (E(): 3e-18%2C 35.2%25 identity in 355 aa overlap);gbkey=CDS;gene=SC3C8.09;product=hypothetical protein;protein_id=NP_630481.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7057546	7059096	.	+	.	ID=id8381;Note=IS110%3B identical to SCIS110 Y00434 Streptomyces coelicolor insertion sequence IS110 from 1 to 1551;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7057809	7059026	.	+	.	ID=gene6453;Dbxref=GeneID:1101832;Name=SC3C8.10;gbkey=Gene;gene=SC3C8.10;gene_biotype=protein_coding;gene_synonym=SC3C8.10;locus_tag=SCO6391
NC_003888.3	RefSeq	CDS	7057809	7059026	.	+	0	ID=cds6330;Parent=gene6453;Dbxref=Genbank:NP_630482.1,GeneID:1101832;Name=NP_630482.1;Note=SC3C8.10%2C probable IS110 transposase/integrase%2C len: 405 aa%3B identical to YIS1_STRCO insertion element IS110 hypothetical protein (405 aa). Similar to many e.g. YI11_STRCL S.clavuligerus IS116 encoded  integrase/transposase (399 aa)%2C fasta scores%3B opt: 680 z-score: 854.2 E(): 0%2C 34.4%25 identity in 390 aa overlap. Also some similarity toPIV_MORBO pilin gene inverting protein (PIVML) (322 aa)%2C fasta scores%3B opt: 302 z-score: 369.5 E(): 2.4e-13%2C 29.5%25 identity in 237 aa overlap;gbkey=CDS;gene=SC3C8.10;product=IS110 transposase/integrase;protein_id=NP_630482.1;transl_table=11
NC_003888.3	RefSeq	gene	7059104	7060243	.	-	.	ID=gene6454;Dbxref=GeneID:1101833;Name=SC3C8.11c;gbkey=Gene;gene=SC3C8.11c;gene_biotype=protein_coding;gene_synonym=SC3C8.11c;locus_tag=SCO6392
NC_003888.3	RefSeq	CDS	7059104	7060243	.	-	0	ID=cds6331;Parent=gene6454;Dbxref=Genbank:NP_630483.1,GeneID:1101833;Name=NP_630483.1;Note=SC3C8.11c%2C probable transposase%2C len: 379 aa%3B similar to many e.g. YIS1_STRCO insertion element IS110 hypothetical protein (405 aa)%2C fasta scores%3B opt: 239 z-score: 294.4 E(): 3.7e-09%2C 27.5%25 identity in 356 aa overlap. Contains probable coiled-coil from aa 214 to 249;gbkey=CDS;gene=SC3C8.11c;product=transposase;protein_id=NP_630483.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7059106	7060244	.	-	.	ID=id8382;Note=possible IS element similar to IS100%3B boundaries uncertain;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	7060374	7062603	.	+	.	ID=id8383;Note=possible IS element belonging to IS21/IS1162 family%3B boundaries uncertain;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7060375	7061838	.	+	.	ID=gene6455;Dbxref=GeneID:1101834;Name=SC3C8.12;gbkey=Gene;gene=SC3C8.12;gene_biotype=protein_coding;gene_synonym=SC3C8.12;locus_tag=SCO6393
NC_003888.3	RefSeq	CDS	7060375	7061838	.	+	0	ID=cds6332;Parent=gene6455;Dbxref=Genbank:NP_630484.1,GeneID:1101834;Name=NP_630484.1;Note=SC3C8.12%2C probable transposase IS21/IS1162 family%2C len: 487 aa%3B similar to many e.g. TRA6_BACST transposase for insertion sequence element IS5376 (400 aa)%2C fasta scores%3B opt: 377 z-score: 617.9 E(): 3.6e-27%2C 29.9%25 identity in 351 aa overlap. Contains probable helix-turn-helix motif at aa 39 to 60 (Score 2208%2C +6.71 SD));gbkey=CDS;gene=SC3C8.12;product=transposase;protein_id=NP_630484.1;transl_table=11
NC_003888.3	RefSeq	gene	7061835	7062605	.	+	.	ID=gene6456;Dbxref=GeneID:1101835;Name=SC3C8.13;gbkey=Gene;gene=SC3C8.13;gene_biotype=protein_coding;gene_synonym=SC3C8.13;locus_tag=SCO6394
NC_003888.3	RefSeq	CDS	7061835	7062605	.	+	0	ID=cds6333;Parent=gene6456;Dbxref=Genbank:NP_630485.1,GeneID:1101835;Name=NP_630485.1;Note=SC3C8.13%2C probable IS element ATP binding protein (IS21/IS1162 family)%2C len: 256 aa%3B similar to e.g. ISTB_BACST insertion sequence IS5376 ATP-binding protein (251 aa)%2C fasta scores%3B opt: 741 z-score: 1114.9 E(): 0%2C 44.4%25 identity in 248 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC3C8.13;product=IS element ATP binding protein;protein_id=NP_630485.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7062159	7062182	.	+	.	ID=id8384;Dbxref=GeneID:1101835;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3C8.13
NC_003888.3	RefSeq	repeat_region	7062818	7063562	.	+	.	ID=id8385;Note=5' half of IS element similar to IS110 upstream%3B this element has been interrupted by the insertion of IS1648 in the centre. Left hand boundary uncertain;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7063063	7065221	.	+	.	ID=gene6457;Dbxref=GeneID:1101836;Name=SC3C8.14;gbkey=Gene;gene=SC3C8.14;gene_biotype=pseudogene;gene_synonym=SC3C8.14,SC3C8.17;locus_tag=SCO6395;pseudo=true
NC_003888.3	RefSeq	sequence_feature	7063063	7065221	.	+	.	ID=id8386;Dbxref=GeneID:1101836;Note=SC3C8.14%2C probable IS element transposase%2C partial CDS%2C len: 175 aa%3B highly similar to YIS1_STRCO insertion element IS110 hypothetical 43.6 K protein (405 aa)%2C fasta scores%3B opt: 798 z-score: 1438.7 E(): 0%2C 70.8%25 identity in 171 aa overlap. This IS element has been interrupted by insertion of a second IS element in the centre~SC3C8.17%2C probable IS element transposase%2C partial CDS%2C len: 230 aa%3B highly similar to YIS1_STRCO insertion element IS110 hypothetical 43.6 K protein (405 aa)%2C fasta scores%3B opt: 1025 z-score: 1634.1 E(): 0%2C 69.6%25 identity in 230 aa overlap. This IS element has been interrupted by insertion of a second IS element in the centre%3BIS element transposase;gbkey=misc_feature;gene=SC3C8.14
NC_003888.3	RefSeq	repeat_region	7063558	7064526	.	+	.	ID=id8387;Dbxref=GeneID:1101836;Note=IS1648. This IS element has inserted into another IS element similar to IS100;gbkey=repeat_region;gene=SC3C8.14
NC_003888.3	RefSeq	repeat_region	7063558	7063585	.	+	.	ID=id8388;Dbxref=GeneID:1101836;Note=24/28 bp inverted repeat at end of IS1648;gbkey=repeat_region;gene=SC3C8.14
NC_003888.3	RefSeq	gene	7063621	7064501	.	+	.	ID=gene6458;Dbxref=GeneID:1101837;Name=SC3C8.15;gbkey=Gene;gene=SC3C8.15;gene_biotype=pseudogene;gene_synonym=SC3C8.15,SC3C8.16;locus_tag=SCO6396;pseudo=true
NC_003888.3	RefSeq	sequence_feature	7063621	7064501	.	+	.	ID=id8389;Dbxref=GeneID:1101837;Note=SC3C8.15%2C probable transposase for IS1648%2C len: 141 aa%3B similar to many e.g. YI22_BURCE insertion element IS402 hypothetical 16.2 K protein (147 aa)%2C fasta scores%3B opt: 259 z-score: 252.5 E(): 8e-07%2C 36.6%25 identity in 142 aa overlap. Note that this CDS is probably expressed by frameshifting into the downstream ORF~SC3C8.16%2C probable transposase for IS1648%2C len: 152 aa%3B similar to many e.g. YI21_BURCE insertion element IS402 hypothetical 24 KD protein (211 aa)%2C fasta scores%3B opt: 164z-score: 315.3 E(): 2.5e-10%2C 36.0%25 identity in 136 aa overlap. Note that this CDS is probably expressed by frameshifting from the upstream ORF%3BIS1648 transposase;gbkey=misc_feature;gene=SC3C8.15
NC_003888.3	RefSeq	repeat_region	7064499	7064526	.	-	.	ID=id8390;Note=24/28 bp inverted repeat at end of IS1648;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	7064517	7065195	.	+	.	ID=id8391;Dbxref=GeneID:1101836;Note=3' half of IS element similar to IS110 upstream%3B this element hasbeen interrupted by the insertion of IS1648 in the centre in the centre. Right hand boundary uncertain;gbkey=repeat_region;gene=SC3C8.14
NC_003888.3	RefSeq	gene	7065214	7065729	.	-	.	ID=gene6459;Dbxref=GeneID:1101838;Name=SC3C8.18c;gbkey=Gene;gene=SC3C8.18c;gene_biotype=protein_coding;gene_synonym=SC3C8.18c;locus_tag=SCO6399
NC_003888.3	RefSeq	CDS	7065214	7065729	.	-	0	ID=cds6334;Parent=gene6459;Dbxref=Genbank:NP_630486.1,GeneID:1101838;Name=NP_630486.1;Note=SC3C8.18c%2C unknown%2C len: 171 aa;gbkey=CDS;gene=SC3C8.18c;product=hypothetical protein;protein_id=NP_630486.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7065733	7065738	.	-	.	ID=id8392;Note=possible RBS upstream of SC3C8.18c;gbkey=RBS
NC_003888.3	RefSeq	repeat_region	7065745	7068285	.	-	.	ID=id8393;Note=IS117%3B identical to SCMINCIR X15942 Streptomyces coelicolor mini-circle DNA from 1 to 2527;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7066309	7067553	.	+	.	ID=gene6460;Dbxref=GeneID:1101839;Name=SC3C8.19;gbkey=Gene;gene=SC3C8.19;gene_biotype=protein_coding;gene_synonym=SC3C8.19;locus_tag=SCO6400
NC_003888.3	RefSeq	CDS	7066309	7067553	.	+	0	ID=cds6335;Parent=gene6460;Dbxref=Genbank:NP_630487.1,GeneID:1101839;Name=NP_630487.1;Note=SC3C8.19%2C probable transposase for IS117%2C len: 414 aa%3B identical to YM3_STRCO mini-circle hypothetical 45.7 kd protein (414 aa) and similar to many others e.g. YI11_STRCL insertion element IS116 hypothetical 44.8 kD protein (399 aa)%2C fasta scores%3B opt: 324 z-score: 416.9 E(): 5.6e-16%2C 27.4%25 identity in 413 aa overlap;gbkey=CDS;gene=SC3C8.19;product=IS117 transposase;protein_id=NP_630487.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7066564	7066569	.	+	.	ID=id8394;Dbxref=GeneID:1101839;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature;gene=SC3C8.19
NC_003888.3	RefSeq	sequence_feature	7066564	7066569	.	-	.	ID=id8395;Note=Cleavage site for AseI restriction endonuclease AT*TAAT.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7067605	7068132	.	-	.	ID=gene6461;Dbxref=GeneID:1101840;Name=SC3C8.21c;gbkey=Gene;gene=SC3C8.21c;gene_biotype=protein_coding;gene_synonym=SC3C8.21c;locus_tag=SCO6401
NC_003888.3	RefSeq	CDS	7067605	7068132	.	-	0	ID=cds6336;Parent=gene6461;Dbxref=Genbank:NP_630488.1,GeneID:1101840;Name=NP_630488.1;Note=SC3C8.21c%2C unknown ORF in IS117%2C len: 175 aa%3B identical to%2C but longer than%2C YM2_STRCO mini-circle hypothetical 13.3 KD protein (122 aa). Note alternative ORF on opposite strand. Contains TTA Leu codon%3B possible site for action of bldA;gbkey=CDS;gene=SC3C8.21c;product=hypothetical protein;protein_id=NP_630488.1;transl_table=11
NC_003888.3	RefSeq	gene	7067650	7068003	.	+	.	ID=gene6462;Dbxref=GeneID:1101841;Name=SC3C8.20;gbkey=Gene;gene=SC3C8.20;gene_biotype=protein_coding;gene_synonym=SC3C8.20;locus_tag=SCO6402
NC_003888.3	RefSeq	CDS	7067650	7068003	.	+	0	ID=cds6337;Parent=gene6462;Dbxref=Genbank:NP_630489.1,GeneID:1101841;Name=NP_630489.1;Note=SC3C8.20%2C unknown ORF in IS117%2C len: 117 aa%3B identical to YM1_STRCO mini-circle hypothetical 12.9 KD protein (117 aa). Note alternative ORF on opposite strand;gbkey=CDS;gene=SC3C8.20;product=hypothetical protein;protein_id=NP_630489.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7068001	7068003	.	-	.	ID=id8396;Dbxref=GeneID:1101840;Note=TTA Leu codon%3B possible site for action of bldA;gbkey=misc_feature;gene=SC3C8.21c
NC_003888.3	RefSeq	gene	7068218	7068598	.	-	.	ID=gene6463;Dbxref=GeneID:1101842;Name=SC3C8.22c;gbkey=Gene;gene=SC3C8.22c;gene_biotype=protein_coding;gene_synonym=SC3C8.22c;locus_tag=SCO6403
NC_003888.3	RefSeq	CDS	7068218	7068598	.	-	0	ID=cds6338;Parent=gene6463;Dbxref=Genbank:NP_630490.1,GeneID:1101842;Name=NP_630490.1;Note=SC3C8.22c%2C unknown%2C len: 126 aa;gbkey=CDS;gene=SC3C8.22c;product=hypothetical protein;protein_id=NP_630490.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7069244	7069250	.	+	.	ID=id8397;Note=possible RBS upstream of SC3C8.23;gbkey=RBS
NC_003888.3	RefSeq	gene	7069255	7069434	.	+	.	ID=gene6464;Dbxref=GeneID:1101843;Name=SC3C8.23;gbkey=Gene;gene=SC3C8.23;gene_biotype=protein_coding;gene_synonym=SC3C8.23;locus_tag=SCO6404
NC_003888.3	RefSeq	CDS	7069255	7069434	.	+	0	ID=cds6339;Parent=gene6464;Dbxref=Genbank:NP_630491.1,GeneID:1101843;Name=NP_630491.1;Note=SC3C8.23%2C unknown%2C len: 59 aa;gbkey=CDS;gene=SC3C8.23;product=hypothetical protein;protein_id=NP_630491.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7069497	7069500	.	+	.	ID=id8398;Note=possible RBS upstream of SC3C8.24;gbkey=RBS
NC_003888.3	RefSeq	gene	7069508	7071526	.	+	.	ID=gene6465;Dbxref=GeneID:1101844;Name=SC3C8.24;gbkey=Gene;gene=SC3C8.24;gene_biotype=protein_coding;gene_synonym=SC3C8.24;locus_tag=SCO6405
NC_003888.3	RefSeq	CDS	7069508	7071526	.	+	0	ID=cds6340;Parent=gene6465;Dbxref=Genbank:NP_630492.1,GeneID:1101844;Name=NP_630492.1;Note=SC3C8.24%2C possible DNA recombinase%2C len: 672 aa%3B some similarity to CISA_BACSU DNA recombinase (500 aa)%2C fasta scores%3B opt: 139 z-score: 221.6 E(): 4.2e-05%2C 25.8%25 identity in 383 aa overlap%2C with stronger similarity around the conserved active site. Contains PS00397 Site-specific recombinases active site%2C Pfam match to entry recombinase PF00239%2C Site-specific recombinases%2C score 52.67 and probable coiled-coil from aa 391 to 428. Also similar to S. coelicolor prophage gene SC2E1.37 (E(): 0%2C 41.1%25 identity in 689 aa overlap);gbkey=CDS;gene=SC3C8.24;product=DNA recombinase;protein_id=NP_630492.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7069577	7070035	.	+	.	ID=id8399;Dbxref=GeneID:1101844;Note=Pfam match to entry recombinase PF00239%2C Site-specific recombinases%2C score 52.67;gbkey=misc_feature;gene=SC3C8.24
NC_003888.3	RefSeq	sequence_feature	7069583	7069609	.	+	.	ID=id8400;Dbxref=GeneID:1101844;Note=PS00397 Site-specific recombinases active site;gbkey=misc_feature;gene=SC3C8.24
NC_003888.3	RefSeq	gene	7071396	7071791	.	-	.	ID=gene6466;Dbxref=GeneID:1101845;Name=SC3C8.25c;gbkey=Gene;gene=SC3C8.25c;gene_biotype=protein_coding;gene_synonym=SC3C8.25c;locus_tag=SCO6406
NC_003888.3	RefSeq	CDS	7071396	7071791	.	-	0	ID=cds6341;Parent=gene6466;Dbxref=Genbank:NP_630493.1,GeneID:1101845;Name=NP_630493.1;Note=SC3C8.25c%2C possible hypothetical protein%2C len: 131 aa%3B contains possible N-terminal signal sequence;gbkey=CDS;gene=SC3C8.25c;product=hypothetical protein;protein_id=NP_630493.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7071934	7071939	.	+	.	ID=id8401;Note=possible RBS upstream of SC3C8.26;gbkey=RBS
NC_003888.3	RefSeq	gene	7071944	7073755	.	+	.	ID=gene6467;Dbxref=GeneID:1101846;Name=SC3C8.26;gbkey=Gene;gene=SC3C8.26;gene_biotype=protein_coding;gene_synonym=SC3C8.26;locus_tag=SCO6407
NC_003888.3	RefSeq	CDS	7071944	7073755	.	+	0	ID=cds6342;Parent=gene6467;Dbxref=Genbank:NP_630494.1,GeneID:1101846;Name=NP_630494.1;Note=SC3C8.26%2C possible gamma-glutamyltranspeptidase ( hypothetical protein)%2C len: 603 aa%3B similar to many e.g. GGT_BACSU gamma-glutamyltranspeptidase precursor (EC 2.3.2.2) (587 aa)%2C fasta scores%3B opt: 705 z-score: 863.9 E(): 0%2C 36.9%25 identity in 591 aa overlap%2C and to PAC1_PSESV cephalosporin acylase I (EC 3.5.1.-) (557 aa)%2C fasta scores%3B opt: 377 z-score: 819.8 E(): 0%2C 34.1%25 identity in 569 aa overlap. Contains probable N-terminal signal sequence;gbkey=CDS;gene=SC3C8.26;product=gamma-glutamyltranspeptidase;protein_id=NP_630494.1;transl_table=11
NC_003888.3	RefSeq	gene	7073756	7076284	.	-	.	ID=gene6468;Dbxref=GeneID:1101847;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;gene_synonym=clpA;locus_tag=SCO6408
NC_003888.3	RefSeq	CDS	7073756	7076284	.	-	0	ID=cds6343;Parent=gene6468;Dbxref=Genbank:NP_630495.1,GeneID:1101847;Name=NP_630495.1;Note=SC3C8.27c%2C clpA%2C probable clp protease ATP binding subunit%2C len: 842 aa%3B highly similar to many e.g. CLPB_ECOLI clpB protein (857 aa)%2C fasta scores%3B opt: 975 z-score: 1914.6 E(): 0%2C 46.8%25 identity in 857 aa overlap anCLAB_LYCES ATP-dependent clp protease atp-binding subunit (923 aa)%2C fasta scores%3B opt: 2335 z-score: 2174.3 E(): 0%2C 50.3%25 identity in 758 aa overlap. Contains 2x PS00017 ATP/GTP-binding site motif A (P-loop)%2C PS00870 and PS00871 Chaperonins clpA/B signatures 1 and 2%2C Pfam match to entry clpA_B PF00495%2C Chaperonins clpA/B%2C score 1127.99 and probable coiled-coil from aa 432 to 488;gbkey=CDS;gene=clpA;product=Clp protease ATP binding subunit;protein_id=NP_630495.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7073816	7075717	.	-	.	ID=id8402;Dbxref=GeneID:1101847;Note=Pfam match to entry clpA_B PF00495%2C Chaperonins clpA/B%2C score 1127.99;gbkey=misc_feature;gene=clpA
NC_003888.3	RefSeq	sequence_feature	7074434	7074490	.	-	.	ID=id8403;Dbxref=GeneID:1101847;Note=PS00871 Chaperonins clpA/B signature 2;gbkey=misc_feature;gene=clpA
NC_003888.3	RefSeq	sequence_feature	7074545	7074568	.	-	.	ID=id8404;Dbxref=GeneID:1101847;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=clpA
NC_003888.3	RefSeq	sequence_feature	7075274	7075312	.	-	.	ID=id8405;Dbxref=GeneID:1101847;Note=PS00870 Chaperonins clpA/B signature 1;gbkey=misc_feature;gene=clpA
NC_003888.3	RefSeq	sequence_feature	7075559	7075582	.	-	.	ID=id8406;Dbxref=GeneID:1101847;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=clpA
NC_003888.3	RefSeq	ribosome_entry_site	7076294	7076299	.	-	.	ID=id8407;Note=possible RBS upstream of clpA;gbkey=RBS
NC_003888.3	RefSeq	gene	7076437	7077213	.	-	.	ID=gene6469;Dbxref=GeneID:1101848;Name=map2;gbkey=Gene;gene=map2;gene_biotype=protein_coding;gene_synonym=map2;locus_tag=SCO6409
NC_003888.3	RefSeq	CDS	7076437	7077213	.	-	0	ID=cds6344;Parent=gene6469;Dbxref=Genbank:NP_630496.1,GeneID:1101848;Name=NP_630496.1;Note=SC3C8.28c%2C map2%2C probable methionine aminopeptidase%2C len: 258 aa%3B highly similar to many e.g. AMPM_BACSU methionine aminopeptidase (EC 3.4.11.18) (248 aa)%2C fasta scores%3B opt: 655 z-score: 833.0 E(): 0%2C 41.1%25 identity in 253 aa overlap. Also similar to S. coelicolor map TR:O54208 (EMBL:X83011) (SC6G4.02)%3B 46.8%25 identity in 267 aa overlap;gbkey=CDS;gene=map2;product=methionine aminopeptidase;protein_id=NP_630496.1;transl_table=11
NC_003888.3	RefSeq	gene	7077312	7077563	.	+	.	ID=gene6470;Dbxref=GeneID:1101849;Name=SC3C8.29;gbkey=Gene;gene=SC3C8.29;gene_biotype=protein_coding;gene_synonym=SC3C8.29;locus_tag=SCO6410
NC_003888.3	RefSeq	CDS	7077312	7077563	.	+	0	ID=cds6345;Parent=gene6470;Dbxref=Genbank:NP_630497.1,GeneID:1101849;Name=NP_630497.1;Note=SC3C8.29%2C possible DNA-binding protein%2C len: 83 aa%3B contains probable helix-turn-helix motif at aa 29 to 50 (Score 1589%2C +4.60 SD));gbkey=CDS;gene=SC3C8.29;product=DNA-binding protein;protein_id=NP_630497.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7077734	7077739	.	+	.	ID=id8408;Note=possible RBS upstream of SC3C8.30;gbkey=RBS
NC_003888.3	RefSeq	gene	7077746	7078588	.	+	.	ID=gene6471;Dbxref=GeneID:1101850;Name=SC3C8.30;gbkey=Gene;gene=SC3C8.30;gene_biotype=protein_coding;gene_synonym=SC3C8.30;locus_tag=SCO6411
NC_003888.3	RefSeq	CDS	7077746	7078588	.	+	0	ID=cds6346;Parent=gene6471;Dbxref=Genbank:NP_630498.1,GeneID:1101850;Name=NP_630498.1;Note=SC3C8.30%2C probable hydrolase%2C len: 280 aa%3B similar to e.g. BUP_RAT beta-ureidopropionase (EC 3.5.1.6) (beta-alanine synthase) (393 aa)%2C fasta scores%3B opt: 529 z-score: 700.2 E(): 9.2e-32%2C 37.2%25 identity in 296 aa overlap. Also highly similar to TR:E1292351 (EMBL:AL023496)  hydrolase SC1A6.03%2C fasta scores%3B E(): 0%2C 72.1%25 identity in 280 aa overlap;gbkey=CDS;gene=SC3C8.30;product=hydrolase;protein_id=NP_630498.1;transl_table=11
NC_003888.3	RefSeq	gene	7078585	7079868	.	+	.	ID=gene6472;Dbxref=GeneID:1101851;Name=SC1A6.01;gbkey=Gene;gene=SC1A6.01;gene_biotype=protein_coding;gene_synonym=SC1A6.01,SC3C8.31;locus_tag=SCO6412
NC_003888.3	RefSeq	CDS	7078585	7079868	.	+	0	ID=cds6347;Parent=gene6472;Dbxref=Genbank:NP_733700.1,GeneID:1101851;Name=NP_733700.1;Note=SC1A6.01%2C probable aminotransferase%2C partial CDS%2C len: 190 aa%3B similar to many members of the class-III family of pyridoxal-phosphate-dependent aminotransferases e.g. ARGD_ANASP P54752 anabaena sp. acetylornithine aminotransferase (427 aa)%2C fasta scores%3B opt: 315 z-score: 402.3 E(): 2.8e-15%2C 36.0%25 identity in 189 aa overlap. Contains Pfam matchto entry aminotran_3 PF00202%2C Aminotransferases class-III pyridoxal-phosphate%2C score 147.18~SC3C8.31%2C probable aminotransferase%2C partial CDS%2C len: > 270 aa%3B similar to many members of the class-III pyridoxal-phosphate-dependent aminotransferase family%2C e.g. ARGD_CORGL acetylornithine aminotransferase (389 aa)%2C fasta scores%3B opt: 202 z-score: 588.9 E(): 1.5e-25%2C 36.9%25 identity in 271 aa overlap. Contains Pfam match to entry aminotran_3 PF00202%2C Aminotransferases class-III pyridoxal-phosphate%2C score 171.39. Continues as SC1A6.01;gbkey=CDS;gene=SC1A6.01;product=aminotransferase;protein_id=NP_733700.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7078678	7079394	.	+	.	ID=id8409;Dbxref=GeneID:1101851;Note=Pfam match to entry aminotran_3 PF00202%2C Aminotransferases class-III pyridoxal-phosphate%2C score 171.39;gbkey=misc_feature;gene=SC1A6.01
NC_003888.3	RefSeq	sequence_feature	7079296	7079802	.	+	.	ID=id8410;Dbxref=GeneID:1101851;Note=Pfam match to entry aminotran_3 PF00202%2C Aminotransferases class-III pyridoxal-phosphate%2C score 147.18;gbkey=misc_feature;gene=SC1A6.01
NC_003888.3	RefSeq	ribosome_entry_site	7079895	7079899	.	+	.	ID=id8411;Note=possible RBS upstream of SC1A6.02;gbkey=RBS
NC_003888.3	RefSeq	gene	7079908	7081521	.	+	.	ID=gene6473;Dbxref=GeneID:1101852;Name=SC1A6.02;gbkey=Gene;gene=SC1A6.02;gene_biotype=protein_coding;gene_synonym=SC1A6.02;locus_tag=SCO6413
NC_003888.3	RefSeq	CDS	7079908	7081521	.	+	0	ID=cds6348;Parent=gene6473;Dbxref=Genbank:NP_630499.1,GeneID:1101852;Name=NP_630499.1;Note=SC1A6.02%2C possible DNA-binding protein%2C len: 537 aa%3B some similarity to a regulator of polyketide gene expression from Streptomyces ambofaciens%3B TR:Q00509 (EMBL:X63451) srmR (604 aa)%2C fasta scores%3B opt: 160 z-score: 215.6 E(): 7e-05%2C 26.8%25 identity in 400 aa overlap. Contains probable helix-turn-helix motifat aa 486-507 (Score 1520%2C +4.36 SD);gbkey=CDS;gene=SC1A6.02;product=DNA-binding protein;protein_id=NP_630499.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7081646	7081650	.	+	.	ID=id8412;Note=possible RBS upstream of SC1A6.03;gbkey=RBS
NC_003888.3	RefSeq	gene	7081657	7082499	.	+	.	ID=gene6474;Dbxref=GeneID:1101853;Name=SC1A6.03;gbkey=Gene;gene=SC1A6.03;gene_biotype=protein_coding;gene_synonym=SC1A6.03;locus_tag=SCO6414
NC_003888.3	RefSeq	CDS	7081657	7082499	.	+	0	ID=cds6349;Parent=gene6474;Dbxref=Genbank:NP_630500.1,GeneID:1101853;Name=NP_630500.1;Note=SC1A6.03%2C possible hydrolase%2C len: 280%3B similar to e.g. BUP_RAT Q03248 rattus norvegicus (rat). beta-ureidopropionase (393 aa)%2C fasta scores%3B opt: 530 z-score: 759.6 E(): 0%2C 36.6%25 identity in 279 aa overlap;gbkey=CDS;gene=SC1A6.03;product=hypothetical protein;protein_id=NP_630500.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7082519	7082524	.	+	.	ID=id8413;Note=possible RBS upstream of SC1A6.04;gbkey=RBS
NC_003888.3	RefSeq	gene	7082535	7083938	.	+	.	ID=gene6475;Dbxref=GeneID:1101854;Name=SC1A6.04;gbkey=Gene;gene=SC1A6.04;gene_biotype=protein_coding;gene_synonym=SC1A6.04;locus_tag=SCO6415
NC_003888.3	RefSeq	CDS	7082535	7083938	.	+	0	ID=cds6350;Parent=gene6475;Dbxref=Genbank:NP_630501.1,GeneID:1101854;Name=NP_630501.1;Note=catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position;gbkey=CDS;gene=SC1A6.04;product=phenylhydantoinase;protein_id=NP_630501.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7083937	7083941	.	+	.	ID=id8414;Note=possible RBS upstream of SC1A6.05;gbkey=RBS
NC_003888.3	RefSeq	gene	7083950	7084972	.	+	.	ID=gene6476;Dbxref=GeneID:1101855;Name=SC1A6.05;gbkey=Gene;gene=SC1A6.05;gene_biotype=protein_coding;gene_synonym=SC1A6.05;locus_tag=SCO6416
NC_003888.3	RefSeq	CDS	7083950	7084972	.	+	0	ID=cds6351;Parent=gene6476;Dbxref=Genbank:NP_630502.1,GeneID:1101855;Name=NP_630502.1;Note=SC1A6.05%2C unknown%2C len: 340 aa%3B some similarity to e.g. TR:Q49598 (EMBL:U31567) Methanopyrus kandleri N5%2CN10-methylenetetrahydromethanopterin reductase (349 aa)%2C fasta scores%3B opt: 207 z-score: 425.6 E(): 1.4e-16%2C 25.7%25 identityin 358 aa overlap;gbkey=CDS;gene=SC1A6.05;product=oxidoreductase;protein_id=NP_630502.1;transl_table=11
NC_003888.3	RefSeq	gene	7085067	7086635	.	+	.	ID=gene6477;Dbxref=GeneID:1101856;Name=SC1A6.06;gbkey=Gene;gene=SC1A6.06;gene_biotype=protein_coding;gene_synonym=SC1A6.06;locus_tag=SCO6417
NC_003888.3	RefSeq	CDS	7085067	7086635	.	+	0	ID=cds6352;Parent=gene6477;Dbxref=Genbank:NP_630503.1,GeneID:1101856;Name=NP_630503.1;Note=SC1A6.06%2C possible integral membrane transporter%2C len: 522 aa%3B some similarity to e.g. FUR4_YEAST P05316 saccharomyces cerevisiae uracil permease (633 aa)%2C fasta sores%3B opt:478 z-score: 454.0 E(): 3.6e-18%2C 28.2%25 identity in 485 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane component signature;gbkey=CDS;gene=SC1A6.06;product=integral membrane transporter;protein_id=NP_630503.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7086144	7086230	.	+	.	ID=id8415;Dbxref=GeneID:1101856;Note=PS00402 Binding-protein-dependent transport systems inner membrane component signature;gbkey=misc_feature;gene=SC1A6.06
NC_003888.3	RefSeq	gene	7086736	7088364	.	-	.	ID=gene6478;Dbxref=GeneID:1101857;Name=SC1A6.07c;gbkey=Gene;gene=SC1A6.07c;gene_biotype=protein_coding;gene_synonym=SC1A6.07c;locus_tag=SCO6418
NC_003888.3	RefSeq	CDS	7086736	7088364	.	-	0	ID=cds6353;Parent=gene6478;Dbxref=Genbank:NP_630504.1,GeneID:1101857;Name=NP_630504.1;Note=SC1A6.07c%2C unknown%2C len: 813;gbkey=CDS;gene=SC1A6.07c;product=hypothetical protein;protein_id=NP_630504.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7088375	7088379	.	-	.	ID=id8416;Note=possible RBS upstream of SC1A6.07c;gbkey=RBS
NC_003888.3	RefSeq	gene	7088518	7089174	.	-	.	ID=gene6479;Dbxref=GeneID:1101858;Name=SC1A6.08c;gbkey=Gene;gene=SC1A6.08c;gene_biotype=protein_coding;gene_synonym=SC1A6.08c;locus_tag=SCO6419
NC_003888.3	RefSeq	CDS	7088518	7089174	.	-	0	ID=cds6354;Parent=gene6479;Dbxref=Genbank:NP_630505.1,GeneID:1101858;Name=NP_630505.1;Note=SC1A6.08c%2C unknown%2C len: 218 aa;gbkey=CDS;gene=SC1A6.08c;product=hypothetical protein;protein_id=NP_630505.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7089181	7089185	.	-	.	ID=id8417;Note=possible RBS upstream of SC1A6.08c;gbkey=RBS
NC_003888.3	RefSeq	gene	7089432	7090445	.	-	.	ID=gene6480;Dbxref=GeneID:1101859;Name=SC1A6.09c;gbkey=Gene;gene=SC1A6.09c;gene_biotype=protein_coding;gene_synonym=SC1A6.09c;locus_tag=SCO6420
NC_003888.3	RefSeq	CDS	7089432	7090445	.	-	0	ID=cds6355;Parent=gene6480;Dbxref=Genbank:NP_630506.1,GeneID:1101859;Name=NP_630506.1;Note=SC1A6.09c%2C unknown%2C len: 337 aa%3B similar to M. tuberculosis hypothetical protein TR:O06218 (EMBL:O06218) MTCY270.09 (344 aa)%2C fasta scores%3B opt: 632 z-score: 560.4 E(): 4.3e-24%2C 38.1%25 identity in 341 aa overlap. Contains possible helix-turn-helix motif at aa 23-44 (Score 987%2C +2.55 SD);gbkey=CDS;gene=SC1A6.09c;product=DNA-binding protein;protein_id=NP_630506.1;transl_table=11
NC_003888.3	RefSeq	gene	7090613	7091761	.	+	.	ID=gene6481;Dbxref=GeneID:1101860;Name=SC1A6.10;gbkey=Gene;gene=SC1A6.10;gene_biotype=protein_coding;gene_synonym=SC1A6.10;locus_tag=SCO6421
NC_003888.3	RefSeq	CDS	7090613	7091761	.	+	0	ID=cds6356;Parent=gene6481;Dbxref=Genbank:NP_630507.1,GeneID:1101860;Name=NP_630507.1;Note=SC1A6.10%2C probable two-component system sensor kinase%2C len: 382 aa%3B N-terminus (~~1-150 aa) contains six potential transmembrane domains%2C C-terminus is similar to e.g. SW:UHPB_ECOLI (P09835) Escherichia coli sensor protein UhpB (500 aa)%2C fasta scores%3B opt: 151 z-score: 290.1 E(): 4.9e-09%2C 28.3%25 identity in 314 aa overlap and to many Streptomyces coelicolor two-component system sensor kinases%2C e.g. TR:Q9S2S0 (EMBL:AL09687) two-component system sensor kinase SC5F7.35c%2C 416 aa%3B fasta scores: opt: 525 Z-score: 546.5 E(): 8.3e-23%3B 40.489%25 identity in 368 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC1A6.10;product=two-component system sensor kinase;protein_id=NP_630507.1;transl_table=11
NC_003888.3	RefSeq	gene	7091758	7092432	.	+	.	ID=gene6482;Dbxref=GeneID:1101861;Name=SC1A6.11;gbkey=Gene;gene=SC1A6.11;gene_biotype=protein_coding;gene_synonym=SC1A6.11;locus_tag=SCO6422
NC_003888.3	RefSeq	CDS	7091758	7092432	.	+	0	ID=cds6357;Parent=gene6482;Dbxref=Genbank:NP_630508.1,GeneID:1101861;Name=NP_630508.1;Note=SC1A6.11%2C probable two-component system regulatory protein%2C len: 224 aa%3B similar to members of the luxR/uhpA family e.g. DEGU_BACSU P13800 transcriptional regulatory protein DegU (229 aa)%2C fasta scores%3B opt: 330 z-score: 706.1 E(): 3.3e-32%2C 36.7%25 identity in 226 aa overlap. Contains Pfam matches to entry response_reg PF00072%2C Response regulator receiver domain%2C score 149.95%2C and to entry GerE PF00196%2C Bacterial regulatory proteins%2C luxR family%2C score 89.64;gbkey=CDS;gene=SC1A6.11;product=two-component system regulatory protein;protein_id=NP_630508.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7091770	7092117	.	+	.	ID=id8418;Dbxref=GeneID:1101861;Note=Pfam match to entry response_reg PF00072%2C Response regulator receiver domain%2C score 149.95;gbkey=misc_feature;gene=SC1A6.11
NC_003888.3	RefSeq	sequence_feature	7092220	7092411	.	+	.	ID=id8419;Dbxref=GeneID:1101861;Note=Pfam match to entry GerE PF00196%2C Bacterial regulatory proteins%2C luxR family%2C score 89.64;gbkey=misc_feature;gene=SC1A6.11
NC_003888.3	RefSeq	gene	7092451	7093617	.	-	.	ID=gene6483;Dbxref=GeneID:1101862;Name=SC1A6.12c;gbkey=Gene;gene=SC1A6.12c;gene_biotype=protein_coding;gene_synonym=SC1A6.12c;locus_tag=SCO6423
NC_003888.3	RefSeq	CDS	7092451	7093617	.	-	0	ID=cds6358;Parent=gene6483;Dbxref=Genbank:NP_630509.1,GeneID:1101862;Name=NP_630509.1;Note=SC1A6.12c%2C lipoate-protein ligase%2C len: 388 aa%3B some similarity inC-terM to LPLA_ECOLI P32099 Escherichia coli  lipoate-protein ligase A (337 aa)%2C fasta scores%3B opt: 162 z-score: 223.4E(): 2.5e-05%2C 27.8%25 identity in 252 aa overlap;gbkey=CDS;gene=SC1A6.12c;product=lipoate-protein ligase;protein_id=NP_630509.1;transl_table=11
NC_003888.3	RefSeq	gene	7093614	7094609	.	-	.	ID=gene6484;Dbxref=GeneID:1101863;Name=SC1A6.13c;gbkey=Gene;gene=SC1A6.13c;gene_biotype=protein_coding;gene_synonym=SC1A6.13c;locus_tag=SCO6424
NC_003888.3	RefSeq	CDS	7093614	7094609	.	-	0	ID=cds6359;Parent=gene6484;Dbxref=Genbank:NP_630510.1,GeneID:1101863;Name=NP_630510.1;Note=SC1A6.13c%2C probable two-component system sensor protein%2C len: 331 aa%3B contains two potential transmembrane domains in the C-terminus%3B similar to e.g. DEGS_BACSU P13799 sensor protein DegS (EC 2.7.3.-) Bacillus subtilis (385 aa)%2C fasta scores: opt: 316 z-score: 369.3 E(): 1.9e-13%2C 30.7%25 identity in 212 aa overlap and to TR:Q52558 (EMBL:U02041) Burkholderia solanacearum VrsA%2C 502 aa%3B fasta scores: opt: 398 Z-score: 416.9 E(): 1.4e-15%3B 31.724%25 identity in 290 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC1A6.13c;product=two-component system sensor protein;protein_id=NP_630510.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7094636	7094662	.	+	.	ID=id8420;Note=27bp direct repeat 1;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	7094663	7094689	.	+	.	ID=id8421;Note=27bp direct repeat 2;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	7094690	7094716	.	+	.	ID=id8422;Note=27bp direct repeat 3;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7094757	7095527	.	+	.	ID=gene6485;Dbxref=GeneID:1101864;Name=SC1A6.14;gbkey=Gene;gene=SC1A6.14;gene_biotype=protein_coding;gene_synonym=SC1A6.14;locus_tag=SCO6425
NC_003888.3	RefSeq	CDS	7094757	7095527	.	+	0	ID=cds6360;Parent=gene6485;Dbxref=Genbank:NP_630511.1,GeneID:1101864;Name=NP_630511.1;Note=SC1A6.14%2C probable transcriptional regulator%2C len: 256 aa%3B weak similarity to e.g. RHAR_ECOLI P09378 Escherichia coli L-rhamnose operon transcriptional regulator RhaR (312 aa)%2C opt: 160 z-score: 207.2 E(): 0.0002%2C 29.5%25 identity in 105 aa overlap. Contains PS00041 Bacterial regulatory proteins%2C araC family signature%2C Pfam match to entry HTH_2 PF00165%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 65.61%2C and probable helix-turn-helix motif at aa 174-195 (Score 1532%2C +4.40 SD);gbkey=CDS;gene=SC1A6.14;product=hypothetical protein;protein_id=NP_630511.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7095270	7095524	.	+	.	ID=id8423;Dbxref=GeneID:1101864;Note=Pfam match to entry HTH_2 PF00165%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 65.61;gbkey=misc_feature;gene=SC1A6.14
NC_003888.3	RefSeq	sequence_feature	7095381	7095506	.	+	.	ID=id8424;Dbxref=GeneID:1101864;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SC1A6.14
NC_003888.3	RefSeq	gene	7095676	7096188	.	+	.	ID=gene6486;Dbxref=GeneID:1101865;Name=SC1A6.15;gbkey=Gene;gene=SC1A6.15;gene_biotype=protein_coding;gene_synonym=SC1A6.15;locus_tag=SCO6426
NC_003888.3	RefSeq	CDS	7095676	7096188	.	+	0	ID=cds6361;Parent=gene6486;Dbxref=Genbank:NP_630512.1,GeneID:1101865;Name=NP_630512.1;Note=SC1A6.15%2C unknown%2C len: 170 aa%3B similar to the C-terminus of several ABC transporter ATP binding proteins involved in iron transport%2C e.g. FEPC_ECOLI P23878 Escherichia coli ferric enterobactin transport ATP binding protein (271 aa)%2C fasta scores%3B opt: 237 z-score: 425.9 E(): 1.3e-16%2C 38.7%25 identity in 106 aa overlap;gbkey=CDS;gene=SC1A6.15;product=hypothetical protein;protein_id=NP_630512.1;transl_table=11
NC_003888.3	RefSeq	gene	7096185	7097480	.	+	.	ID=gene6487;Dbxref=GeneID:1101866;Name=SC1A6.16;gbkey=Gene;gene=SC1A6.16;gene_biotype=protein_coding;gene_synonym=SC1A6.16;locus_tag=SCO6427
NC_003888.3	RefSeq	CDS	7096185	7097480	.	+	0	ID=cds6362;Parent=gene6487;Dbxref=Genbank:NP_630513.1,GeneID:1101866;Name=NP_630513.1;Note=SC1A6.16%2C probable integral membrane transport protein%2C len: 431 aa%3B weak similarity to e.g. Mycobacterium smegmatis TR:O31137 (EMBL:O31137) tetracycline-resistance determinant tetV (419 aa)%2C fasta scores%3B opt: 389 z-score: 243.8 E(): 1.9e-06%2C 27.0%25 identity in 404 aa overlap;gbkey=CDS;gene=SC1A6.16;product=integral membrane transport protein;protein_id=NP_630513.1;transl_table=11
NC_003888.3	RefSeq	gene	7097567	7104511	.	-	.	ID=gene6488;Dbxref=GeneID:1101867;Name=SC1A6.17c;gbkey=Gene;gene=SC1A6.17c;gene_biotype=protein_coding;gene_synonym=SC1A6.17c;locus_tag=SCO6428
NC_003888.3	RefSeq	CDS	7097567	7104511	.	-	0	ID=cds6363;Parent=gene6488;Dbxref=Genbank:NP_630514.1,GeneID:1101867;Name=NP_630514.1;Note=SC1A6.17c%2C possible hypothetical protein%2C len: 2314 aa%3B has short segment of similarity to acid phosphatases e.g. PHOC_MORMO P28581 morganella morganii acid phosphatase (249aa)%2C fasta scores%3B opt: 251 z-score: 206.3 E(): 0.00023%2C 32.1%25 identity in 162 aa overlap and to TR:CAC37553 (EMBL:AL590983) Streptomyces coelicolor conserved hypothetical protein (fragment) SCBAC1C11.07c%2C 676 aa%3B fasta scores: opt: 490 Z-score: 458.2E(): 6.9e-18%3B 26.124%25 identity in 712 aa overlap. Contains possible N-terminalsignal sequence and PS01157 Class A bacterial acid phosphatases signature;gbkey=CDS;gene=SC1A6.17c;product=hypothetical protein;protein_id=NP_630514.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7098599	7098622	.	-	.	ID=id8425;Dbxref=GeneID:1101867;Note=PS01157 Class A bacterial acid phosphatases signature;gbkey=misc_feature;gene=SC1A6.17c
NC_003888.3	RefSeq	ribosome_entry_site	7104525	7104528	.	-	.	ID=id8426;Note=possible RBS upstream of Sc1A6.17c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7104897	7104900	.	+	.	ID=id8427;Note=possible RBS upstream of SC1A6.18;gbkey=RBS
NC_003888.3	RefSeq	gene	7104902	7106290	.	+	.	ID=gene6489;Dbxref=GeneID:1101868;Name=SC1A6.18;gbkey=Gene;gene=SC1A6.18;gene_biotype=protein_coding;gene_synonym=SC1A6.18;locus_tag=SCO6429
NC_003888.3	RefSeq	CDS	7104902	7106290	.	+	0	ID=cds6364;Parent=gene6489;Dbxref=Genbank:NP_630515.1,GeneID:1101868;Name=NP_630515.1;Note=SC1A6.18%2C unknown%2C len: 462 aa%3B some similarity to a hypothetical proteins from Streptomyces hygroscopicus TR:Q54310 (EMBL:X86780) ORFE from gene cluster for polyketide immunosuppressant rapamycin (465 aa)%2C fatsa scores%3B opt: 306 z-score: 225.9 E(): 1.8e-05%2C 28.3%25 identity in 441 aa overlap;gbkey=CDS;gene=SC1A6.18;product=hypothetical protein;protein_id=NP_630515.1;transl_table=11
NC_003888.3	RefSeq	gene	7106284	7108176	.	+	.	ID=gene6490;Dbxref=GeneID:1101869;Name=SC1A6.19;gbkey=Gene;gene=SC1A6.19;gene_biotype=protein_coding;gene_synonym=SC1A6.19;locus_tag=SCO6430
NC_003888.3	RefSeq	CDS	7106284	7108176	.	+	0	ID=cds6365;Parent=gene6490;Dbxref=Genbank:NP_630516.1,GeneID:1101869;Name=NP_630516.1;Note=SC1A6.19%2C possible integral membrane protein%2C len: 630 aa%3B N-terminus (start to aa ~~400) is hydrophobic%2C C-terminus is proline-rich;gbkey=CDS;gene=SC1A6.19;product=hypothetical protein;protein_id=NP_630516.1;transl_table=11
NC_003888.3	RefSeq	gene	7108264	7111779	.	+	.	ID=gene6491;Dbxref=GeneID:1101870;Name=SC1A6.20;gbkey=Gene;gene=SC1A6.20;gene_biotype=protein_coding;gene_synonym=SC1A6.20;locus_tag=SCO6431
NC_003888.3	RefSeq	CDS	7108264	7111779	.	+	0	ID=cds6366;Parent=gene6491;Dbxref=Genbank:NP_630517.1,GeneID:1101870;Name=NP_630517.1;Note=SC1A6.20%2C probable peptide synthase%2C len: 1171 aa%3B similar to many e.g. TR:Q44103 (EMBL:X97860) Amycolatopsis mediterranei aps gene for peptide synthetase (1324 aa)%2C fasta scores%3B opt: 379 z-score: 1175.7 E(): 0%2C 32.3%25 identity in 993 aa overlap. Contains PS00455  AMP-binding domain signature%2C PS00012 Phosphopantetheine attachment site and Pfam match to entry AMP-binding PF00501%2C AMP-binding enzymes%2C score 421.02;gbkey=CDS;gene=SC1A6.20;product=peptide synthase;protein_id=NP_630517.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7108348	7109535	.	+	.	ID=id8428;Dbxref=GeneID:1101870;Note=Pfam match to entry AMP-binding PF00501%2C AMP-binding enzymes%2C score 421.02;gbkey=misc_feature;gene=SC1A6.20
NC_003888.3	RefSeq	sequence_feature	7108705	7108740	.	+	.	ID=id8429;Dbxref=GeneID:1101870;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC1A6.20
NC_003888.3	RefSeq	sequence_feature	7111609	7111656	.	+	.	ID=id8430;Dbxref=GeneID:1101870;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC1A6.20
NC_003888.3	RefSeq	ribosome_entry_site	7111850	7111854	.	+	.	ID=id8431;Note=possible RBS upstream of SC1A6.21;gbkey=RBS
NC_003888.3	RefSeq	gene	7111866	7116089	.	+	.	ID=gene6492;Dbxref=GeneID:1101871;Name=SC1A6.21;gbkey=Gene;gene=SC1A6.21;gene_biotype=protein_coding;gene_synonym=SC1A6.21;locus_tag=SCO6432
NC_003888.3	RefSeq	CDS	7111866	7116089	.	+	0	ID=cds6367;Parent=gene6492;Dbxref=Genbank:NP_630518.1,GeneID:1101871;Name=NP_630518.1;Note=SC1A6.21%2C probable peptide synthase%2C len: 1407 aa%3B similar to many e.g. TR:Q54959 (EMBL:X98690) Streptomyces pristinaespiralis Pristinamycin I synthase 2 (2591 aa)%2C fasta scores%3B opt: 743 z-score: 754.8 E(): 0%2C 33.1%25 identity in1298 aa overlap. Contains PS00455  AMP-binding domain signature%2C PS00012 Phosphopantetheine attachment site%2C PS00120 Lipases%2C serine active site and Pfam match to entry AMP-binding PF00501%2C AMP-binding enzymes%2C score 430.73;gbkey=CDS;gene=SC1A6.21;product=peptide synthase;protein_id=NP_630518.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7113579	7114796	.	+	.	ID=id8432;Dbxref=GeneID:1101871;Note=Pfam match to entry AMP-binding PF00501%2C AMP-binding enzymes%2C score 430.73;gbkey=misc_feature;gene=SC1A6.21
NC_003888.3	RefSeq	sequence_feature	7113936	7113971	.	+	.	ID=id8433;Dbxref=GeneID:1101871;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC1A6.21
NC_003888.3	RefSeq	sequence_feature	7115175	7115222	.	+	.	ID=id8434;Dbxref=GeneID:1101871;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC1A6.21
NC_003888.3	RefSeq	sequence_feature	7115532	7115561	.	+	.	ID=id8435;Dbxref=GeneID:1101871;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=SC1A6.21
NC_003888.3	RefSeq	ribosome_entry_site	7116075	7116078	.	+	.	ID=id8436;Dbxref=GeneID:1101871;Note=possible RBS upstream of SC1A6.22;gbkey=RBS;gene=SC1A6.21
NC_003888.3	RefSeq	gene	7116086	7116493	.	+	.	ID=gene6493;Dbxref=GeneID:1101872;Name=SC1A6.22;gbkey=Gene;gene=SC1A6.22;gene_biotype=protein_coding;gene_synonym=SC1A6.22;locus_tag=SCO6433
NC_003888.3	RefSeq	CDS	7116086	7116493	.	+	0	ID=cds6368;Parent=gene6493;Dbxref=Genbank:NP_630519.1,GeneID:1101872;Name=NP_630519.1;Note=SC1A6.22%2C unknown%2C len: 135 aa;gbkey=CDS;gene=SC1A6.22;product=hypothetical protein;protein_id=NP_630519.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7116503	7116506	.	+	.	ID=id8437;Note=possible RBS upstream of SC1A6.23;gbkey=RBS
NC_003888.3	RefSeq	gene	7116513	7117874	.	+	.	ID=gene6494;Dbxref=GeneID:1101873;Name=SC1A6.23;gbkey=Gene;gene=SC1A6.23;gene_biotype=protein_coding;gene_synonym=SC1A6.23,SC9B5.01;locus_tag=SCO6434
NC_003888.3	RefSeq	CDS	7116513	7117874	.	+	0	ID=cds6369;Parent=gene6494;Dbxref=Genbank:NP_733701.1,GeneID:1101873;Name=NP_733701.1;Note=SC9B5.01%2C partial CDS%2C probable oxidoreductase%2C len: 353aa%3B overlaps with and forms the C-terminus of TR:O69828 on overlapping cosmid 1A6%2C similar to several eg. SW:PVDA_BURCE L-ornithine 5-monooxygenase from Burkholderia cepacia (444 aa) fasta scores%3B opt: 641%2C z-score: 580.6%2C E(): 4.7e-25%2C(40.5%25 identity in 316 aa overlap).~SC1A6.23%2C probable oxidoreductase%2C partial CDS%2C len: 133 aa%3B overlaps and forms the N-terminus of SC9B5.01 on overlapping cosmid 9B5%2C highly similar to an E. coli plasmid gene involved in siderophore biosynthesis IUCD_ECOLI P11295 Escherichia coli plasmid COLV-K30%2C lysine N-hydroxlyase (426 aa)%2Cfasta scores%3B opt: 298 z-score: 548.9 E(): 1.9e-23%2C 43.5%25 identity in 108 aa overlap;gbkey=CDS;gene=SC1A6.23;product=oxidoreductase;protein_id=NP_733701.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7116813	7116914	.	+	.	ID=id8438;Dbxref=GeneID:1101873;Note=Overlap with Streptomyces coelicolor cosmid 1A6 (EMBL:AL023496).;gbkey=misc_feature;gene=SC1A6.23
NC_003888.3	RefSeq	gene	7117871	7118257	.	+	.	ID=gene6495;Dbxref=GeneID:1101874;Name=SC9B5.02;gbkey=Gene;gene=SC9B5.02;gene_biotype=protein_coding;gene_synonym=SC9B5.02;locus_tag=SCO6435
NC_003888.3	RefSeq	CDS	7117871	7118257	.	+	0	ID=cds6370;Parent=gene6495;Dbxref=Genbank:NP_630520.1,GeneID:1101874;Name=NP_630520.1;Note=SC9B5.02%2C unknown%2C len: 128 aa%3B similar to SW:WH16_STRCO 16.7kD protein in whiE locus of Streptomyces coelicolor (157 aa) fasta scores%3B opt: 199%2C z-score: 252.3%2C E(): 9.3e-07%2C (31.2%25 identity in 125 aa overlap).;gbkey=CDS;gene=SC9B5.02;product=hypothetical protein;protein_id=NP_630520.1;transl_table=11
NC_003888.3	RefSeq	gene	7118254	7119774	.	+	.	ID=gene6496;Dbxref=GeneID:1101875;Name=SC9B5.03;gbkey=Gene;gene=SC9B5.03;gene_biotype=protein_coding;gene_synonym=SC9B5.03;locus_tag=SCO6436
NC_003888.3	RefSeq	CDS	7118254	7119774	.	+	0	ID=cds6371;Parent=gene6496;Dbxref=Genbank:NP_630521.1,GeneID:1101875;Name=NP_630521.1;Note=SC9B5.03%2C probable tRNA synthetase%2C len: 506 aa%3B similar to many eg. SW:SYM_METTH methionyl-tRNA synthetase from Methanobacterium thermoautotrophicum (651 aa) fasta scores%3B opt: 610%2C z-score: 560.9%2C E(): 5.9e-24%2C (28.9%25 identity in 402 aa overlap). Contains PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=CDS;gene=SC9B5.03;product=tRNA synthetase;protein_id=NP_630521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7118296	7118331	.	+	.	ID=id8439;Dbxref=GeneID:1101875;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=SC9B5.03
NC_003888.3	RefSeq	gene	7119848	7121122	.	+	.	ID=gene6497;Dbxref=GeneID:1101876;Name=SC9B5.04;gbkey=Gene;gene=SC9B5.04;gene_biotype=protein_coding;gene_synonym=SC9B5.04;locus_tag=SCO6437
NC_003888.3	RefSeq	CDS	7119848	7121122	.	+	0	ID=cds6372;Parent=gene6497;Dbxref=Genbank:NP_630522.1,GeneID:1101876;Name=NP_630522.1;Note=SC9B5.04%2C unknown%2C len: 424 aa%3B similar to two hypothetical proteins SW:Y4RH_RHISN from Rhizobium sp. fasta scores%3B opt: 213%2C z-score: 366.1%2C E(): 4.2e-13%2C (26.3%25 identity in 335 aa overlap) and SW:YWFE_BACSU from Bacillus subtilis (472 aa) fasta scores%3B opt: 217%2C z-score: 289.2%2C E(): 8.1e-09%2C (29.4%25 identity in 364 aa overlap). Also weakly similar to carbomylphosphate synthetases eg. TR:O50302 (EMBL:AJ001805) carbomylphosphate synthetase large subunit from Bacillus subtilis (1064 aa) fasta scores%3B opt: 150%2C z-score: 196.8%2C E(): 0.0011%2C (25.8%25 identity in 295 aa overlap).;gbkey=CDS;gene=SC9B5.04;product=hypothetical protein;protein_id=NP_630522.1;transl_table=11
NC_003888.3	RefSeq	gene	7121125	7122447	.	+	.	ID=gene6498;Dbxref=GeneID:1101877;Name=SC9B5.05;gbkey=Gene;gene=SC9B5.05;gene_biotype=protein_coding;gene_synonym=SC9B5.05;locus_tag=SCO6438
NC_003888.3	RefSeq	CDS	7121125	7122447	.	+	0	ID=cds6373;Parent=gene6498;Dbxref=Genbank:NP_630523.1,GeneID:1101877;Name=NP_630523.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;gene=SC9B5.05;product=diaminopimelate decarboxylase;protein_id=NP_630523.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7121227	7122309	.	+	.	ID=id8440;Dbxref=GeneID:1101877;Note=Pfam match to entry PF00278 Orn_DAP_Arg_deC%2C Pyridoxal-dependent decarboxylase.;gbkey=misc_feature;gene=SC9B5.05
NC_003888.3	RefSeq	sequence_feature	7121296	7121352	.	+	.	ID=id8441;Dbxref=GeneID:1101877;Note=PS00878 Orn /DAP /Arg decarboxylases family 2 pyridoxal-P attachment site.;gbkey=misc_feature;gene=SC9B5.05
NC_003888.3	RefSeq	sequence_feature	7121791	7121832	.	+	.	ID=id8442;Dbxref=GeneID:1101877;Note=PS00879 Orn /DAP /Arg decarboxylases family 2 signature 2.;gbkey=misc_feature;gene=SC9B5.05
NC_003888.3	RefSeq	gene	7122416	7122904	.	-	.	ID=gene6499;Dbxref=GeneID:1101878;Name=SC9B5.06c;gbkey=Gene;gene=SC9B5.06c;gene_biotype=protein_coding;gene_synonym=SC9B5.06c;locus_tag=SCO6439
NC_003888.3	RefSeq	CDS	7122416	7122904	.	-	0	ID=cds6374;Parent=gene6499;Dbxref=Genbank:NP_630524.1,GeneID:1101878;Name=NP_630524.1;Note=SC9B5.06c%2C possible DNA-binding protein%2C len: 162 aa%3B similar in parts to many eukaryotic Y-box binding proteins (cold shock proteins) eg. SW:YB1_CHICK Y-box binding protein from Gallus gallus (chicken) (321 aa) fasta scores%3B opt: 165%2C z-score: 278.2%2C E(): 3.3e-08%2C (34.9%25 identity in 106 aa overlap) and TR:O53883 (EMBL:AL022004) proposed cold shock protein B from Mycobacterium tuberculosis (135 aa) fasta scores%3B opt: 174%2C z-score: 248.0%2C E(): 1.6e-06%2C (34.4%25 identity in 96 aa overlap). Contains Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain.;gbkey=CDS;gene=SC9B5.06c;product=DNA-binding protein;protein_id=NP_630524.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7122653	7122802	.	-	.	ID=id8443;Dbxref=GeneID:1101878;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain.;gbkey=misc_feature;gene=SC9B5.06c
NC_003888.3	RefSeq	gene	7123131	7123883	.	+	.	ID=gene6500;Dbxref=GeneID:1101879;Name=SC9B5.07;gbkey=Gene;gene=SC9B5.07;gene_biotype=protein_coding;gene_synonym=SC9B5.07;locus_tag=SCO6440
NC_003888.3	RefSeq	CDS	7123131	7123883	.	+	0	ID=cds6375;Parent=gene6500;Dbxref=Genbank:NP_630525.1,GeneID:1101879;Name=NP_630525.1;Note=SC9B5.07%2C conserved hypothetical protein%2C len: 250aa%3B similar to 3 eg. SW:YA99_METJA hypothetical protein MJ1099 from Methanococcus jannaschii (235 aa) fasta scores%3Bopt: 848%2C z-score: 1229.1%2C E(): 0%2C (57.9%25 identity in 233 aa overlap).;gbkey=CDS;gene=SC9B5.07;product=hypothetical protein;protein_id=NP_630525.1;transl_table=11
NC_003888.3	RefSeq	gene	7123886	7125292	.	+	.	ID=gene6501;Dbxref=GeneID:1101880;Name=SC9B5.08;gbkey=Gene;gene=SC9B5.08;gene_biotype=protein_coding;gene_synonym=SC9B5.08;locus_tag=SCO6441
NC_003888.3	RefSeq	CDS	7123886	7125292	.	+	0	ID=cds6376;Parent=gene6501;Dbxref=Genbank:NP_630526.1,GeneID:1101880;Name=NP_630526.1;Note=SC9B5.08%2C probable aldehyde dehydrogenase%2C len: 468aa%3B similar to many eg. TR:O86742 (EMBL:AL031035) from Streptomyces coelicolor (479 aa) fasta scores%3B opt: 917%2C z-score: 901.0%2C E(): 0%2C (36.9%25 identity in 450 aa overlap) and SW:FEAB_ECOLI phenylacetaldehyde dehydrogenase from Escherichia coli (499 aa) fasta scores%3B opt: 799%2C z-score: 841.1%2C E(): 0%2C (38.7%25 identity in 465 aa overlap). Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase%2C PS00070 Aldehyde dehydrogenases cysteine active site and PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=CDS;gene=SC9B5.08;product=aldehyde dehydrogenase;protein_id=NP_630526.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7123919	7125274	.	+	.	ID=id8444;Dbxref=GeneID:1101880;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase.;gbkey=misc_feature;gene=SC9B5.08
NC_003888.3	RefSeq	sequence_feature	7124597	7124620	.	+	.	ID=id8445;Dbxref=GeneID:1101880;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;gene=SC9B5.08
NC_003888.3	RefSeq	sequence_feature	7124681	7124716	.	+	.	ID=id8446;Dbxref=GeneID:1101880;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;gbkey=misc_feature;gene=SC9B5.08
NC_003888.3	RefSeq	gene	7125293	7126396	.	+	.	ID=gene6502;Dbxref=GeneID:1101881;Name=SC9B5.09;gbkey=Gene;gene=SC9B5.09;gene_biotype=protein_coding;gene_synonym=SC9B5.09;locus_tag=SCO6442
NC_003888.3	RefSeq	CDS	7125293	7126396	.	+	0	ID=cds6377;Parent=gene6502;Dbxref=Genbank:NP_630527.1,GeneID:1101881;Name=NP_630527.1;Note=SC9B5.09%2C probable alcohol dehydrogenase%2C len: 367aa%3B similar to many eg. SW:XYLB_PSEPU aryl-alcohol dehydrogenase from Pseudomonas putida (366 aa) fasta scores%3B opt: 928%2C z-score: 888.5%2C E(): 0%2C (42.6%25 identity in 366 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=CDS;gene=SC9B5.09;product=alcohol dehydrogenase;protein_id=NP_630527.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7125305	7126375	.	+	.	ID=id8447;Dbxref=GeneID:1101881;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=misc_feature;gene=SC9B5.09
NC_003888.3	RefSeq	gene	7126477	7127388	.	+	.	ID=gene6503;Dbxref=GeneID:1101882;Name=SC9B5.10;gbkey=Gene;gene=SC9B5.10;gene_biotype=protein_coding;gene_synonym=SC9B5.10;locus_tag=SCO6443
NC_003888.3	RefSeq	CDS	7126477	7127388	.	+	0	ID=cds6378;Parent=gene6503;Dbxref=Genbank:NP_630528.1,GeneID:1101882;Name=NP_630528.1;Note=SC9B5.10%2C conserved hypothetical protein%2C len: 303aa%3B similar to many hypothetical proteins e.g. TR:O86359 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (314 aa) fasta scores%3B opt: 464%2C z-score: 847.2%2C E(): 0%2C (36.7%25 identity in 313 aa overlap). Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC9B5.10;product=hypothetical protein;protein_id=NP_630528.1;transl_table=11
NC_003888.3	RefSeq	gene	7127464	7129407	.	+	.	ID=gene6504;Dbxref=GeneID:1101883;Name=SC9B5.11;gbkey=Gene;gene=SC9B5.11;gene_biotype=protein_coding;gene_synonym=SC9B5.11;locus_tag=SCO6444
NC_003888.3	RefSeq	CDS	7127464	7129407	.	+	0	ID=cds6379;Parent=gene6504;Dbxref=Genbank:NP_630529.1,GeneID:1101883;Name=NP_630529.1;Note=SC9B5.11%2C probable gamma-glutamyl transferase%2C len: 647 aa%3B similar to many gamma-glutamyl transferases eg. TR:Q54353 (EMBL:X79146) LmbA%2C gamma-glutamyl transferase involved in lincomycin production in Streptomyces lincolnensis 78-11 (601 aa) fasta scores%3B opt: 871%2C z-score: 1756.8%2C E(): 0%2C (48.1%25 identity in 619 aa overlap). Also similar to TR:O54174 (EMBL:AL021411) probable transferase (606aa) from Streptomyces coelicolor fasta scores: opt: 953%2C z-score: 1203.1%2C E(): 0%2C (53.7%25 identity in 635 aa overlap). Contains Pfam match to entry PF01019 G_glu_transpept%2C Gamma-glutamyltranspeptidase;gbkey=CDS;gene=SC9B5.11;product=gamma-glutamyl transferase;protein_id=NP_630529.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7127626	7129395	.	+	.	ID=id8448;Dbxref=GeneID:1101883;Note=Pfam match to entry PF01019 G_glu_transpept%2C Gamma-glutamyltranspeptidase.;gbkey=misc_feature;gene=SC9B5.11
NC_003888.3	RefSeq	gene	7129505	7130350	.	+	.	ID=gene6505;Dbxref=GeneID:1101884;Name=SC9B5.12;gbkey=Gene;gene=SC9B5.12;gene_biotype=protein_coding;gene_synonym=SC9B5.12;locus_tag=SCO6445
NC_003888.3	RefSeq	CDS	7129505	7130350	.	+	0	ID=cds6380;Parent=gene6505;Dbxref=Genbank:NP_630530.1,GeneID:1101884;Name=NP_630530.1;Note=SC9B5.12%2C probable inositol monophosphatase%2C len: 281aa%3B similar to many eg. SW:MYO3_LYCES myo-inositol-1(or 4)-monophosphatase 3 from Lycopersicon esculentum (tomato) (268 aa) fasta scores%3B opt: 286%2C z-score: 396.1%2C E(): 9e-15%2C (30.9%25 identity in 275 aa overlap). Contains PS00629 Inositol monophosphatase family signature 1 and PS00630 Inositol monophosphatase family signature 2. Contains 2x Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family.;gbkey=CDS;gene=SC9B5.12;product=inositol monophosphatase;protein_id=NP_630530.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7129733	7129981	.	+	.	ID=id8449;Dbxref=GeneID:1101884;Note=Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family.;gbkey=misc_feature;gene=SC9B5.12
NC_003888.3	RefSeq	sequence_feature	7129802	7129843	.	+	.	ID=id8450;Dbxref=GeneID:1101884;Note=PS00629 Inositol monophosphatase family signature 1.;gbkey=misc_feature;gene=SC9B5.12
NC_003888.3	RefSeq	sequence_feature	7130099	7130239	.	+	.	ID=id8451;Dbxref=GeneID:1101884;Note=Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family.;gbkey=misc_feature;gene=SC9B5.12
NC_003888.3	RefSeq	sequence_feature	7130183	7130227	.	+	.	ID=id8452;Dbxref=GeneID:1101884;Note=PS00630 Inositol monophosphatase family signature 2.;gbkey=misc_feature;gene=SC9B5.12
NC_003888.3	RefSeq	gene	7130387	7131346	.	+	.	ID=gene6506;Dbxref=GeneID:1101885;Name=SC9B5.13;gbkey=Gene;gene=SC9B5.13;gene_biotype=protein_coding;gene_synonym=SC9B5.13;locus_tag=SCO6446
NC_003888.3	RefSeq	CDS	7130387	7131346	.	+	0	ID=cds6381;Parent=gene6506;Dbxref=Genbank:NP_630531.1,GeneID:1101885;Name=NP_630531.1;Note=SC9B5.13%2C unknown%2C len: 319aa.;gbkey=CDS;gene=SC9B5.13;product=hypothetical protein;protein_id=NP_630531.1;transl_table=11
NC_003888.3	RefSeq	gene	7131401	7132141	.	-	.	ID=gene6507;Dbxref=GeneID:1101886;Name=SC9B5.14c;gbkey=Gene;gene=SC9B5.14c;gene_biotype=protein_coding;gene_synonym=SC9B5.14c;locus_tag=SCO6447
NC_003888.3	RefSeq	CDS	7131401	7132141	.	-	0	ID=cds6382;Parent=gene6507;Dbxref=Genbank:NP_630532.1,GeneID:1101886;Name=NP_630532.1;Note=SC9B5.14c%2C possible NAD(P)H oxidoreductase%2C len: 246aa%3B similar to many (prokaryotic and eukaryotic) eg. SW:DHQV_HUMAN NAD(P)H dehydrogenase from Homo sapiens (human) (231 aa) fasta scores%3B opt: 182%2C z-score: 338.0%2C E(): 1.6e-11%2C (30.9%25 identity in 181 aa overlap).;gbkey=CDS;gene=SC9B5.14c;product=NAD(P)H oxidoreductase;protein_id=NP_630532.1;transl_table=11
NC_003888.3	RefSeq	gene	7132189	7133130	.	+	.	ID=gene6508;Dbxref=GeneID:1101887;Name=SC9B5.15;gbkey=Gene;gene=SC9B5.15;gene_biotype=protein_coding;gene_synonym=SC9B5.15;locus_tag=SCO6448
NC_003888.3	RefSeq	CDS	7132189	7133130	.	+	0	ID=cds6383;Parent=gene6508;Dbxref=Genbank:NP_630533.1,GeneID:1101887;Name=NP_630533.1;Note=SC9B5.15%2C AraC-like transcriptional regulator%2C len: 313aa%3B similar to many members of the AraC family of transcriptional regulators eg. SW:MMSR_PSEAE mmsAB operon regulatory protein (307 aa) fasta scores%3B opt: 171%2C z-score: 257.7%2C E(): 4.6e-07%2C (34.6%25 identity in 78 aa overlap). Contains PS00041 Bacterial regulatory proteins%2C araC family signature and Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family.;gbkey=CDS;gene=SC9B5.15;product=AraC-like transcriptional regulator;protein_id=NP_630533.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7132861	7133121	.	+	.	ID=id8453;Dbxref=GeneID:1101887;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family.;gbkey=misc_feature;gene=SC9B5.15
NC_003888.3	RefSeq	sequence_feature	7132972	7133100	.	+	.	ID=id8454;Dbxref=GeneID:1101887;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=SC9B5.15
NC_003888.3	RefSeq	gene	7133229	7134647	.	+	.	ID=gene6509;Dbxref=GeneID:1101888;Name=SC9B5.16;gbkey=Gene;gene=SC9B5.16;gene_biotype=protein_coding;gene_synonym=SC9B5.16;locus_tag=SCO6449
NC_003888.3	RefSeq	CDS	7133229	7134647	.	+	0	ID=cds6384;Parent=gene6509;Dbxref=Genbank:NP_630534.1,GeneID:1101888;Name=NP_630534.1;Note=SC9B5.16%2C possible dehydrogenase%2C len: 472 aa%3B similar to many%2C almost identical to SW:P49_STRLI P49 protein from Streptomyces lividans (469 aa) fasta scores%3B opt: 3162%2C z-score: 3290.5%2C E(): 0%2C (99.1%25 identity in 469 aa overlap). Also similar to SW:CRTI_RHOCA phytoene dehydrogenase from Rhodobacter capsulatus (524 aa) fasta scores%3B opt: 169%2C z-score: 305.6%2C E(): 9.8e-10%2C (25.0%25 identity in 509 aa overlap). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9B5.16;product=dehydrogenase;protein_id=NP_630534.1;transl_table=11
NC_003888.3	RefSeq	gene	7134644	7135153	.	+	.	ID=gene6510;Dbxref=GeneID:1101889;Name=SC9B5.17;gbkey=Gene;gene=SC9B5.17;gene_biotype=protein_coding;gene_synonym=SC9B5.17;locus_tag=SCO6450
NC_003888.3	RefSeq	CDS	7134644	7135153	.	+	0	ID=cds6385;Parent=gene6510;Dbxref=Genbank:NP_630535.1,GeneID:1101889;Name=NP_630535.1;Note=SC9B5.17%2C conserved hypothetical protein%2C len: 169 aa%3B similar to several hypothetical proteins eg. TR:Q44020 (EMBL:L36817) hypothetical protein from Alcaligenes eutrophus (173 aa) fasta scores%3B opt: 482%2C z-score: 757.7%2C E(): 0%2C (50.6%25 identity in 174 aa overlap). Also similar to TR:O75377 (EMBL:AF044286) histone macro 2A1.1 from Homo sapiens (369 aa) fasta scores%3B opt: 256%2C z-score: 321.4%2C E(): 1.3e-10%2C (29.4%25 identity in 170 aa overlap);gbkey=CDS;gene=SC9B5.17;product=hypothetical protein;protein_id=NP_630535.1;transl_table=11
NC_003888.3	RefSeq	gene	7135277	7136905	.	+	.	ID=gene6511;Dbxref=GeneID:1101890;Name=SC9B5.18;gbkey=Gene;gene=SC9B5.18;gene_biotype=protein_coding;gene_synonym=SC9B5.18;locus_tag=SCO6451
NC_003888.3	RefSeq	CDS	7135277	7136905	.	+	0	ID=cds6386;Parent=gene6511;Dbxref=Genbank:NP_630536.1,GeneID:1101890;Name=NP_630536.1;Note=SC9B5.18%2C probable substrate binding protein%2C len: 467aa%3B First of a five gene operon probably involved in peptide uptake. Very similar to SW:XP55_STRLI protein precursor of XP55%2C a major hypothetical protein from Streptomyces lividans (542 aa) fasta scores: opt: 3353%2C z-score: 2613.8%2C E(): 0%2C (95.9%25 identity in 532 aa overlap). Also similar to many substrate binding /transport proteins eg. SW:APPA_BACSU AppA oligopeptide-binding protein precursor from Bacillus subtilis (543 aa) fasta scores: opt: 717%2C z-score: 518.2%2C E(): 1.4e-21%2C (28.7%25 identity in 550 aa overlap). Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site and PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature. Also contains Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5.;gbkey=CDS;gene=SC9B5.18;product=substrate binding protein;protein_id=NP_630536.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7135316	7136839	.	+	.	ID=id8455;Dbxref=GeneID:1101890;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5.;gbkey=misc_feature;gene=SC9B5.18
NC_003888.3	RefSeq	sequence_feature	7135346	7135378	.	+	.	ID=id8456;Dbxref=GeneID:1101890;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SC9B5.18
NC_003888.3	RefSeq	sequence_feature	7135562	7135630	.	+	.	ID=id8457;Dbxref=GeneID:1101890;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;gbkey=misc_feature;gene=SC9B5.18
NC_003888.3	RefSeq	gene	7136902	7137906	.	+	.	ID=gene6512;Dbxref=GeneID:1101891;Name=SC9B5.19;gbkey=Gene;gene=SC9B5.19;gene_biotype=protein_coding;gene_synonym=SC9B5.19;locus_tag=SCO6452
NC_003888.3	RefSeq	CDS	7136902	7137906	.	+	0	ID=cds6387;Parent=gene6512;Dbxref=Genbank:NP_630537.1,GeneID:1101891;Name=NP_630537.1;Note=SC9B5.19%2C probable transport permease%2C len: 334aa%3B second of a five gene operon probably involved in peptide uptake%2C similar to many transport permeases eg. SW:DPPB_ECOLI DppB%2C dipeptide transport system permease from Escherichia coli (339 aa) fasta scores: opt: 362%2C z-score: 742.8%2C E(): 0%2C (32.9%25 identity in 340 aa overlap).;gbkey=CDS;gene=SC9B5.19;product=transport permease;protein_id=NP_630537.1;transl_table=11
NC_003888.3	RefSeq	gene	7137903	7138841	.	+	.	ID=gene6513;Dbxref=GeneID:1101892;Name=SC9B5.20;gbkey=Gene;gene=SC9B5.20;gene_biotype=protein_coding;gene_synonym=SC9B5.20;locus_tag=SCO6453
NC_003888.3	RefSeq	CDS	7137903	7138841	.	+	0	ID=cds6388;Parent=gene6513;Dbxref=Genbank:NP_630538.1,GeneID:1101892;Name=NP_630538.1;Note=SC9B5.20%2C probable transport permease%2C len: 312aa%3B third of a five gene operon probably involved in peptide uptake%2C similar to many transport permeases eg. SW:APPC_BACSU oligopeptide transport permease%2C AppC from Bacillus subtilis (303 aa) fasta scores: opt: 643%2C z-score: 780.7%2C E(): 0%2C (36.6%25 identity in 295 aa overlap). Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=CDS;gene=SC9B5.20;product=transport permease;protein_id=NP_630538.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7138473	7138703	.	+	.	ID=id8458;Dbxref=GeneID:1101892;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=misc_feature;gene=SC9B5.20
NC_003888.3	RefSeq	gene	7138838	7139845	.	+	.	ID=gene6514;Dbxref=GeneID:1101893;Name=SC9B5.21;gbkey=Gene;gene=SC9B5.21;gene_biotype=protein_coding;gene_synonym=SC9B5.21;locus_tag=SCO6454
NC_003888.3	RefSeq	CDS	7138838	7139845	.	+	0	ID=cds6389;Parent=gene6514;Dbxref=Genbank:NP_630539.1,GeneID:1101893;Name=NP_630539.1;Note=SC9B5.21%2C probable ABC transporter ATP-binding protein%2C len: 335aa%3B fourth of a five gene operon probably involved in peptide uptake%2C similar to many eg. SW:DPPD_BACSU dipeptide transport ATP-binding protein%2C DppD%2C from Bacillus subtilis (335 aa) fasta scores: opt: 486%2C z-score: 654.6%2C E(): 3.6e-29%2C (37.6%25 identity in 348 aa overlap). Contains PS00017 ATP /GTP-binding site motif A (P-loop). Also contains Pfam match to entry PF00005 ABC_tran%2C ABC transporters.;gbkey=CDS;gene=SC9B5.21;product=ABC transporter ATP-binding protein;protein_id=NP_630539.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7138949	7139572	.	+	.	ID=id8459;Dbxref=GeneID:1101893;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters.;gbkey=misc_feature;gene=SC9B5.21
NC_003888.3	RefSeq	sequence_feature	7138970	7138993	.	+	.	ID=id8460;Dbxref=GeneID:1101893;Note=PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC9B5.21
NC_003888.3	RefSeq	gene	7139838	7140506	.	+	.	ID=gene6515;Dbxref=GeneID:1101894;Name=SC9B5.22;gbkey=Gene;gene=SC9B5.22;gene_biotype=protein_coding;gene_synonym=SC9B5.22;locus_tag=SCO6455
NC_003888.3	RefSeq	CDS	7139838	7140506	.	+	0	ID=cds6390;Parent=gene6515;Dbxref=Genbank:NP_630540.1,GeneID:1101894;Name=NP_630540.1;Note=SC9B5.22%2C probable ABC transporter ATP-binding protein%2C len: 222aa%3B fifth of a five gene operon probably involved in peptide uptake%2C similar to many eg. SW:OPPF_SALTY oligopeptide transport ATP-binding protein%2C OppF%2C from Salmonella typhimurium (334 aa) fasta scores: opt: 412%2C z-score: 569.7%2C E(): 1.9e-24%2C (35.1%25 identity in 194 aa overlap). Contains PS00017 ATP /GTP-binding site motif A (P-loop). Also contains Pfam match to entry PF00005 ABC_tran%2C ABC transporters.;gbkey=CDS;gene=SC9B5.22;product=ABC transporter ATP-binding protein;protein_id=NP_630540.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7139919	7140485	.	+	.	ID=id8461;Dbxref=GeneID:1101894;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters.;gbkey=misc_feature;gene=SC9B5.22
NC_003888.3	RefSeq	sequence_feature	7139940	7139963	.	+	.	ID=id8462;Dbxref=GeneID:1101894;Note=PS00017 ATP /GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC9B5.22
NC_003888.3	RefSeq	gene	7140529	7141923	.	-	.	ID=gene6516;Dbxref=GeneID:1101895;Name=SC9B5.23c;gbkey=Gene;gene=SC9B5.23c;gene_biotype=protein_coding;gene_synonym=SC9B5.23c;locus_tag=SCO6456
NC_003888.3	RefSeq	CDS	7140529	7141923	.	-	0	ID=cds6391;Parent=gene6516;Dbxref=Genbank:NP_630541.1,GeneID:1101895;Name=NP_630541.1;Note=SC9B5.23c%2C probable hydrolytic protein%2C len: 464aa%3B similar to many eg. SW:ABFB_STRLI alpha-l-arabinofuranosidase precursor from Streptomyces lividans (478 aa) fasta scores: opt: 323%2C z-score: 291.1%2C E(): 6.4e-09%2C (37.9%25 identity in 132 aa overlap). Contains Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9B5.23c;product=hydrolytic protein;protein_id=NP_630541.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7140532	7140927	.	-	.	ID=id8463;Dbxref=GeneID:1101895;Note=Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain.;gbkey=misc_feature;gene=SC9B5.23c
NC_003888.3	RefSeq	gene	7142206	7146129	.	+	.	ID=gene6517;Dbxref=GeneID:1101896;Name=SC9B5.24;gbkey=Gene;gene=SC9B5.24;gene_biotype=protein_coding;gene_synonym=SC9B5.24;locus_tag=SCO6457
NC_003888.3	RefSeq	CDS	7142206	7146129	.	+	0	ID=cds6392;Parent=gene6517;Dbxref=Genbank:NP_630542.1,GeneID:1101896;Name=NP_630542.1;Note=SC9B5.24%2C lacZ*%2C beta-galactosidase%2C len: 1307 aa%3B similar to many e.g. TR:O85167 (EMBL:AF047824) beta-galactosidase from Bacillus megaterium (1034 aa) fasta scores: opt: 1750%2C z-score: 2221.6%2C E(): 0%2C (37.4%25 identity in 1256 aa overlap). Note that this CDS is approx. 300 residues longer than the homologues due to an extra region around residues 600 to 900. Contains PS00719 Glycosyl hydrolases family 2 signature 1 and PS00608 Glycosyl hydrolases family 2 acid /base catalyst. Also contains Pfam match to entry PF00703 glycosyl_hydro7%2C Glycosyl hydrolases family 2.;gbkey=CDS;gene=SC9B5.24;product=beta-galactosidase;protein_id=NP_630542.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7142494	7144200	.	+	.	ID=id8464;Dbxref=GeneID:1101896;Note=Pfam match to entry PF00703 glycosyl_hydro7%2C Glycosyl hydrolases family 2.;gbkey=misc_feature;gene=SC9B5.24
NC_003888.3	RefSeq	sequence_feature	7143547	7143624	.	+	.	ID=id8465;Dbxref=GeneID:1101896;Note=PS00719 Glycosyl hydrolases family 2 signature 1.;gbkey=misc_feature;gene=SC9B5.24
NC_003888.3	RefSeq	sequence_feature	7143730	7143774	.	+	.	ID=id8466;Dbxref=GeneID:1101896;Note=PS00608 Glycosyl hydrolases family 2 acid /base catalyst.;gbkey=misc_feature;gene=SC9B5.24
NC_003888.3	RefSeq	gene	7146169	7147047	.	+	.	ID=gene6518;Dbxref=GeneID:1101897;Name=SC9B5.25;gbkey=Gene;gene=SC9B5.25;gene_biotype=protein_coding;gene_synonym=SC9B5.25;locus_tag=SCO6458
NC_003888.3	RefSeq	CDS	7146169	7147047	.	+	0	ID=cds6393;Parent=gene6518;Dbxref=Genbank:NP_630543.1,GeneID:1101897;Name=NP_630543.1;Note=SC9B5.25%2C unknown%2C len: 292aa%3B similar to TR:O32135 (EMBL:Z99120) hypothetical protein from Bacillus subtilis (284 aa) fasta scores: opt: 304%2C z-score: 523.6%2C E(): 7.2e-22%2C (32.1%25 identity in 293 aa overlap).;gbkey=CDS;gene=SC9B5.25;product=hypothetical protein;protein_id=NP_630543.1;transl_table=11
NC_003888.3	RefSeq	gene	7147028	7147390	.	-	.	ID=gene6519;Dbxref=GeneID:1101898;Name=SC9B5.26c;gbkey=Gene;gene=SC9B5.26c;gene_biotype=protein_coding;gene_synonym=SC9B5.26c;locus_tag=SCO6459
NC_003888.3	RefSeq	CDS	7147028	7147390	.	-	0	ID=cds6394;Parent=gene6519;Dbxref=Genbank:NP_630544.1,GeneID:1101898;Name=NP_630544.1;Note=SC9B5.26c%2C probable regulatory protein%2C len: 120aa%3B similar to many eg. TR:O69711 (EMBL:AL022121) regulatory protein from Mycobacterium tuberculosis (120 aa) fasta scores: opt: 480%2C z-score: 880.6%2C E(): 0%2C (63.2%25 identity in 117 aa overlap) and TR:O54057 (EMBL:AJ001934) nolR%2C negative regulator of nodulation genes in Rhizobium leguminosarum bv. viciae strain TOM (105 aa) fasta scores: opt: 156%2C z-score: 262.6%2C E(): 2.4e-07%2C (34.4%25 identity in 93 aa overlap). Contains Pfam match to entry PF01022 HTH_ARSR_family%2C Bacterial regulatory protein%2C arsR family corresponding to a probable helix-turn-helix at residues 51 to 72 (+5.18 SD).;gbkey=CDS;gene=SC9B5.26c;product=regulatory protein;protein_id=NP_630544.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7147070	7147303	.	-	.	ID=id8467;Dbxref=GeneID:1101898;Note=Pfam match to entry PF01022 HTH_ARSR_family%2C Bacterial regulatory protein%2C arsR family.;gbkey=misc_feature;gene=SC9B5.26c
NC_003888.3	RefSeq	gene	7147460	7149376	.	+	.	ID=gene6520;Dbxref=GeneID:1101899;Name=SC9B5.27;gbkey=Gene;gene=SC9B5.27;gene_biotype=protein_coding;gene_synonym=SC9B5.27;locus_tag=SCO6460
NC_003888.3	RefSeq	CDS	7147460	7149376	.	+	0	ID=cds6395;Parent=gene6520;Dbxref=Genbank:NP_630545.1,GeneID:1101899;Name=NP_630545.1;Note=SC9B5.27%2C possible cation-transporting ATPase%2C len: 638aa%3B similar to many cation-transporting ATPases eg. SW:COPA_ENTHR copper /potassium-transporting%3D from Enterococcus hirae (727 aa) fasta scores: opt: 980%2C z-score: 936.0%2C E(): 0%2C (31.9%25 identity in 630 aa overlap). Contains PS00154 E1-E2 ATPases phosphorylation site and Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPases.;gbkey=CDS;gene=SC9B5.27;product=cation-transporting ATPase;protein_id=NP_630545.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7147781	7149337	.	+	.	ID=id8468;Dbxref=GeneID:1101899;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPases.;gbkey=misc_feature;gene=SC9B5.27
NC_003888.3	RefSeq	sequence_feature	7148471	7148491	.	+	.	ID=id8469;Dbxref=GeneID:1101899;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;gene=SC9B5.27
NC_003888.3	RefSeq	gene	7149468	7150940	.	+	.	ID=gene6521;Dbxref=GeneID:1101900;Name=SC9B5.28;gbkey=Gene;gene=SC9B5.28;gene_biotype=protein_coding;gene_synonym=SC9B5.28;locus_tag=SCO6461
NC_003888.3	RefSeq	CDS	7149468	7150940	.	+	0	ID=cds6396;Parent=gene6521;Dbxref=Genbank:NP_630546.1,GeneID:1101900;Name=NP_630546.1;Note=SC9B5.28%2C possible ADA-like regulatory protein%2C len: 490 aa%3B similar to SC1A9.14 (EMBL:AL034446) possible ADA-like regulatory protein from Streptomyces coelicolor (477 aa) fasta scores: opt: 1192%2C z-score: 937.1%2C E(): 0%2C (53.3%25 identity in 501 aa overlap). Also similar to ADA_MYCTU ADA regulatory protein from Mycobacterium tuberculosis (496 aa) fasta scores%3B opt: 2185%2C z-score: 2395.4%2C E(): 0%2C (66.7%25 identity in 490 aa overlap). Also note N-terminal region similar to N-terminal region of ADA_ECOLI ADA regulatory protein from Escherichia coli (354 aa) fasta scores%3B opt: 257%2C z-score: 248.0%2C E(): 1.6e-06%2C (31.3%25 identity in 182 aa overlap) and C-terminal region similar to 3MG2_ECOLI AlkA%2C 3-methyladenine DNA glycosylase II involved in DNA repair (282 aa) fasta scores%3B opt: 450%2C z-score: 413.0%2C E(): 1e-15%2C (32.5%25 identity in 286 aa overlap). Contains PS00041 araC family signature%2C Pfam matches PF00165 HTH_2 helix-turn-helix /araC and PF01332 AlkA_DNA_repair%2C Alkylbase DNA glycosidases alkA family.;gbkey=CDS;gene=SC9B5.28;product=ADA-like regulatory protein;protein_id=NP_630546.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7149765	7150025	.	+	.	ID=id8470;Dbxref=GeneID:1101900;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family.;gbkey=misc_feature;gene=SC9B5.28
NC_003888.3	RefSeq	sequence_feature	7149876	7150004	.	+	.	ID=id8471;Dbxref=GeneID:1101900;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=SC9B5.28
NC_003888.3	RefSeq	sequence_feature	7150173	7150913	.	+	.	ID=id8472;Dbxref=GeneID:1101900;Note=Pfam match to entry PF01332 AlkA_DNA_repair%2C Alkylbase DNA glycosidases alkA family.;gbkey=misc_feature;gene=SC9B5.28
NC_003888.3	RefSeq	gene	7151007	7151501	.	+	.	ID=gene6522;Dbxref=GeneID:1101901;Name=SC9B5.29;gbkey=Gene;gene=SC9B5.29;gene_biotype=protein_coding;gene_synonym=SC9B5.29;locus_tag=SCO6462
NC_003888.3	RefSeq	CDS	7151007	7151501	.	+	0	ID=cds6397;Parent=gene6522;Dbxref=Genbank:NP_630547.1,GeneID:1101901;Name=NP_630547.1;Note=SC9B5.29%2C ogt2%2C methylated-DNA-protein-cysteine methyltransferase len: 186 aa%3B similar to many eg. SW:DAT1_BACSU methylated-DNA-protein-cysteine methyltransferase from Bacillus subtilis (165 aa) fasta scores%3B opt: 437%2C z-score: 636.5%2C E(): 3.7e-28%2C (46.2%25 identity in 156 aa overlap) and SC1A9.15 (EMBL:AL034446) ogt%2C methylated-DNA-protein-cysteine methyltransferase from Streptomyces coelicolor (186 aa) fasta scores: opt: 466%2C z-score: 648.6%2C E(): 2.6e-31%2C (52.7%25 identity in 150 aa overlap). Contains PS00374 Methylated-DNA--protein-cysteine methyltransferase active site and Pfam match to entry PF01035 Methyltrans%2C 6-O-methylguanine DNA methyltransferase.;gbkey=CDS;gene=SC9B5.29;product=methylated-DNA-protein-cysteine methyltransferase;protein_id=NP_630547.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7151151	7151483	.	+	.	ID=id8473;Dbxref=GeneID:1101901;Note=Pfam match to entry PF01035 Methyltrans%2C 6-O-methylguanine DNA methyltransferase.;gbkey=misc_feature;gene=SC9B5.29
NC_003888.3	RefSeq	sequence_feature	7151379	7151399	.	+	.	ID=id8474;Dbxref=GeneID:1101901;Note=PS00374 Methylated-DNA--protein-cysteine methyltransferase active site.;gbkey=misc_feature;gene=SC9B5.29
NC_003888.3	RefSeq	gene	7151706	7152575	.	+	.	ID=gene6523;Dbxref=GeneID:1101902;Name=SC9B5.30;gbkey=Gene;gene=SC9B5.30;gene_biotype=protein_coding;gene_synonym=SC9B5.30;locus_tag=SCO6463
NC_003888.3	RefSeq	CDS	7151706	7152575	.	+	0	ID=cds6398;Parent=gene6523;Dbxref=Genbank:NP_630548.1,GeneID:1101902;Name=NP_630548.1;Note=SC9B5.30%2C hypothetical protein%2C len: 289aa%3B similar to many eg. TR:O06216 (EMBL:Z95388) from Mycobacterium tuberculosis (288 aa) fasta scores: opt: 272%2C z-score: 302.0%2C E(): 1.6e-09%2C (30.1%25 identity in 259 aa overlap).;gbkey=CDS;gene=SC9B5.30;product=hypothetical protein;protein_id=NP_630548.1;transl_table=11
NC_003888.3	RefSeq	gene	7152607	7153332	.	-	.	ID=gene6524;Dbxref=GeneID:1101903;Name=SC1A11.01c;gbkey=Gene;gene=SC1A11.01c;gene_biotype=protein_coding;gene_synonym=SC1A11.01c,SC9B5.31c;locus_tag=SCO6464
NC_003888.3	RefSeq	CDS	7152607	7153332	.	-	0	ID=cds6399;Parent=gene6524;Dbxref=Genbank:NP_733702.1,GeneID:1101903;Name=NP_733702.1;Note=SC1A11.01c%3B partial CDS%2C possible SIR2 family transcriptional regulator%2C len: 86 aa%3B overlapping N-terminal region of SC9B5.31c%2C from Streptomyces coelicolor cosmid 9B5. Similar to hypothetical proteins and proposed SIR2 family transcriptional regulators eg. TR:O28597 (EMBL:AE000987) proposed transcriptional regulatory protein%2C SIR2 family from Archaeoglobus fulgidus (245 aa) fasta scores%3B opt: 221%2C z-score: 297.7%2C E(): 2.7e-09%2C (36.2%25 identity in 185 aa overlap).~SC9B5.31c%3B partial CDS%2C possible SIR2 family transcriptional regulator%2C len: 190aa%3B overlapping C-terminal region of SC1A11.01c%2C from Streptomyces coelicolor cosmid 1A11. Similar to hypothetical proteins and proposed SIR2 family transcriptional regulators eg. TR:O28597 (EMBL:AE000987) proposed transcriptional regulatory protein%2C SIR2 family from Archaeoglobus fulgidus (245 aa) fasta scores%3B opt: 370%2C z-score: 428.3%2C E(): 1.4e-16%2C (36.2%25 identity in 185 aa overlap).;gbkey=CDS;gene=SC1A11.01c;product=SIR2 family transcriptional regulator;protein_id=NP_733702.1;transl_table=11
NC_003888.3	RefSeq	gene	7153374	7153868	.	-	.	ID=gene6525;Dbxref=GeneID:1101904;Name=SC1A11.02c;gbkey=Gene;gene=SC1A11.02c;gene_biotype=protein_coding;gene_synonym=SC1A11.02c,SC9C7.01c;locus_tag=SCO6465
NC_003888.3	RefSeq	CDS	7153374	7153868	.	-	0	ID=cds6400;Parent=gene6525;Dbxref=Genbank:NP_733703.1,GeneID:1101904;Name=NP_733703.1;Note=SC1A11.02c%2C partial CDS%2C unknown%2C len: 134aa%3B N-terminal region similar to TR:O27370 (EMBL:AE000895) proposed mutator MutT protein from Methanobacterium thermoautotrophicum (135 aa) fasta scores%3B opt: 148%2C z-score: 219.8%2C E(): 5.9e-05%2C (43.5%25 identity in 62 aa overlap).~SC9C7.01c%2C partial CDS%2C unknown%2C len: 49aa%3B overlapping extreme N-terminal region of partial CDS%2C SC1A11.2c from Streptomyces coelicolor cosmid 1A11.;gbkey=CDS;gene=SC1A11.02c;product=hypothetical protein;protein_id=NP_733703.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7153722	7153833	.	+	.	ID=id8475;Note=Overlap with SC1A11 Streptomyces coelicolor cosmid 1A11.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7154053	7155195	.	+	.	ID=gene6526;Dbxref=GeneID:1101905;Name=SC9C7.02;gbkey=Gene;gene=SC9C7.02;gene_biotype=protein_coding;gene_synonym=SC9C7.02;locus_tag=SCO6466
NC_003888.3	RefSeq	CDS	7154053	7155195	.	+	0	ID=cds6401;Parent=gene6526;Dbxref=Genbank:NP_630549.1,GeneID:1101905;Name=NP_630549.1;Note=SC9C7.02%2C conserved hypothetical protein%2C len: 380 aa%3B similar to many e.g. SW:YXAA_BACSU hypothetical protein from Bacillus subtilis (382 aa) fasta scores%3B opt: 1045%2C z-score: 998.9%2C E(): 0%2C (46.3%25 identity in 374 aa overlap) and to SW:GRK_BACSU (EMBL:AB005554) Bacillus subtilis glycerate kinase (EC 2.7.1.31) GlxK%2C 382 aa%3B fasta scores: opt: 1045 Z-score: 991.1 E(): 1.4e-47%3B 46.257%25 identity in 374 aa overlap;gbkey=CDS;gene=SC9C7.02;product=transferase;protein_id=NP_630549.1;transl_table=11
NC_003888.3	RefSeq	gene	7155465	7156247	.	-	.	ID=gene6527;Dbxref=GeneID:1101906;Name=SC9C7.03c;gbkey=Gene;gene=SC9C7.03c;gene_biotype=protein_coding;gene_synonym=SC9C7.03c;locus_tag=SCO6467
NC_003888.3	RefSeq	CDS	7155465	7156247	.	-	0	ID=cds6402;Parent=gene6527;Dbxref=Genbank:NP_630550.1,GeneID:1101906;Name=NP_630550.1;Note=SC9C7.03c%2C probable integral membrane protein%2C possible phosphatidylserine synthase%2C len: 260 aa%3B similar to many from prokaryotes (all ) and eukaryotes eg. SW:PSS_YEAST phosphatidylserine synthase from Saccharomyces cerevisiae (275 aa) fasta scores%3B opt: 187%2C z-score: 254.6%2C E(): 6.8e-07%2C (35.9%25 identity in 170 aa overlap). Contains possible membrane spanning regions;gbkey=CDS;gene=SC9C7.03c;product=phosphatidylserine synthase;protein_id=NP_630550.1;transl_table=11
NC_003888.3	RefSeq	gene	7156306	7156962	.	-	.	ID=gene6528;Dbxref=GeneID:1101907;Name=SC9C7.04c;gbkey=Gene;gene=SC9C7.04c;gene_biotype=protein_coding;gene_synonym=SC9C7.04c;locus_tag=SCO6468
NC_003888.3	RefSeq	CDS	7156306	7156962	.	-	0	ID=cds6403;Parent=gene6528;Dbxref=Genbank:NP_630551.1,GeneID:1101907;Name=NP_630551.1;Note=catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine;gbkey=CDS;gene=SC9C7.04c;product=phosphatidylserine decarboxylase;protein_id=NP_630551.1;transl_table=11
NC_003888.3	RefSeq	gene	7157133	7158338	.	-	.	ID=gene6529;Dbxref=GeneID:1101908;Name=SC9C7.05c;gbkey=Gene;gene=SC9C7.05c;gene_biotype=protein_coding;gene_synonym=SC9C7.05c;locus_tag=SCO6469
NC_003888.3	RefSeq	CDS	7157133	7158338	.	-	0	ID=cds6404;Parent=gene6529;Dbxref=Genbank:NP_630552.1,GeneID:1101908;Name=NP_630552.1;Note=SC9C7.05c%2C possible acyl-CoA dehydrogenase%2C len: 401aa%3B similar to many from prokaryotes and eukaryotes egs. SW:ACDB_BACSU acyl-CoA dehydrogenase from Bacillus subtilis (379 aa) fasta scores%3B opt: 520%2C z-score: 1209.6%2C E(): 0%2C (38.9%25 identity in 386 aa overlap) and SW:ACDM_MOUSE acyl-CoA dehydrogenase from Mus musculus (mouse) (421 aa) fasta scores%3B opt: 484%2C z-score: 1178.1%2C E(): 0%2C (40.3%25 identity in 390 aa overlap). Contains Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase.;gbkey=CDS;gene=SC9C7.05c;product=acyl-CoA dehydrogenase;protein_id=NP_630552.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7157166	7158311	.	-	.	ID=id8476;Dbxref=GeneID:1101908;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase.;gbkey=misc_feature;gene=SC9C7.05c
NC_003888.3	RefSeq	gene	7158341	7158853	.	-	.	ID=gene6530;Dbxref=GeneID:1101909;Name=SC9C7.06c;gbkey=Gene;gene=SC9C7.06c;gene_biotype=protein_coding;gene_synonym=SC9C7.06c;locus_tag=SCO6470
NC_003888.3	RefSeq	CDS	7158341	7158853	.	-	0	ID=cds6405;Parent=gene6530;Dbxref=Genbank:NP_630553.1,GeneID:1101909;Name=NP_630553.1;Note=SC9C7.06c%2C unknown%2C len: 170 aa%3B similar to TR:O06163 (EMBL:Z95556) from Mycobacterium tuberculosis (185 aa) fasta scores%3B opt: 342%2C z-score: 497.2%2C E(): 2.1e-20%2C (38.8%25 identity in 152 aa overlap).;gbkey=CDS;gene=SC9C7.06c;product=hypothetical protein;protein_id=NP_630553.1;transl_table=11
NC_003888.3	RefSeq	gene	7158859	7159878	.	-	.	ID=gene6531;Dbxref=GeneID:1101910;Name=SC9C7.07c;gbkey=Gene;gene=SC9C7.07c;gene_biotype=protein_coding;gene_synonym=SC9C7.07c;locus_tag=SCO6471
NC_003888.3	RefSeq	CDS	7158859	7159878	.	-	0	ID=cds6406;Parent=gene6531;Dbxref=Genbank:NP_630554.1,GeneID:1101910;Name=NP_630554.1;Note=SC9C7.07c%2C probable citratelyase%2C len: 339 aa%3B similar to many e.g. SW:CILB_KLEPN citrate lyase beta chain from Klebsiella pneumoniae (289 aa) fasta scores%3B opt: 187%2C z-score: 643.3%2C E(): 1.5e-28%2C (30.5%25 identity in 298 aa overlap).;gbkey=CDS;gene=SC9C7.07c;product=citratelyase;protein_id=NP_630554.1;transl_table=11
NC_003888.3	RefSeq	gene	7159875	7161902	.	-	.	ID=gene6532;Dbxref=GeneID:1101911;Name=SC9C7.08c;gbkey=Gene;gene=SC9C7.08c;gene_biotype=protein_coding;gene_synonym=SC9C7.08c;locus_tag=SCO6472
NC_003888.3	RefSeq	CDS	7159875	7161902	.	-	0	ID=cds6407;Parent=gene6532;Dbxref=Genbank:NP_630555.1,GeneID:1101911;Name=NP_630555.1;Note=SC9C7.08c%2C meaA%2C coenzyme B12-dependent mutase%2C len: 675aa%3B similar to many%2C very similar to TR:O33614 (EMBL:AF008569) coenzyme B12-dependent mutase from Streptomyces collinus (674 aa) fasta scores%3B opt: 4085%2C z-score: 5046.6%2C E(): 0%2C (91.7%25 identity in 675 aa overlap).;gbkey=CDS;gene=SC9C7.08c;product=coenzyme B12-dependent mutase;protein_id=NP_630555.1;transl_table=11
NC_003888.3	RefSeq	gene	7161921	7163264	.	-	.	ID=gene6533;Dbxref=GeneID:1101912;Name=SC9C7.09c;gbkey=Gene;gene=SC9C7.09c;gene_biotype=protein_coding;gene_synonym=SC9C7.09c;locus_tag=SCO6473
NC_003888.3	RefSeq	CDS	7161921	7163264	.	-	0	ID=cds6408;Parent=gene6533;Dbxref=Genbank:NP_630556.1,GeneID:1101912;Name=NP_630556.1;Note=SC9C7.09c%2C ccr%2C crotonyl CoA reductase%2C len: 447aa%3B similar to many%2C very similar to EMBL:U37135 ccr%2C crotonyl CoA reductase from Streptomyces collinus (447 aa) fasta scores%3B opt: 2819%2C z-score: 3635.0%2C E(): 0%2C (92.6%25 identity in 447 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=CDS;gene=SC9C7.09c;product=crotonyl CoA reductase;protein_id=NP_630556.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7162008	7163129	.	-	.	ID=id8477;Dbxref=GeneID:1101912;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=misc_feature;gene=SC9C7.09c
NC_003888.3	RefSeq	gene	7163600	7164418	.	-	.	ID=gene6534;Dbxref=GeneID:1101913;Name=SC9C7.10c;gbkey=Gene;gene=SC9C7.10c;gene_biotype=protein_coding;gene_synonym=SC9C7.10c;locus_tag=SCO6474
NC_003888.3	RefSeq	CDS	7163600	7164418	.	-	0	ID=cds6409;Parent=gene6534;Dbxref=Genbank:NP_630557.1,GeneID:1101913;Name=NP_630557.1;Note=SC9C7.10c%2C possible transcriptional regulator%2C len: 272 aa%3B similar to many hypotheticals and SW:TCMR_STRGA TcmR%2C tetracenomycin C transcriptional repressor from Streptomyces glaucescens (226 aa) fasta scores%3B opt: 221%2C z-score: 260.3%2C E(): 3.3e-07%2C (31.7%25 identity in 221 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Also contains a probable helix-turn-helix from residue 53 to 74 (+3.47 SD).;gbkey=CDS;gene=SC9C7.10c;product=transcriptional regulator;protein_id=NP_630557.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7164188	7164313	.	-	.	ID=id8478;Dbxref=GeneID:1101913;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=misc_feature;gene=SC9C7.10c
NC_003888.3	RefSeq	gene	7164555	7166360	.	-	.	ID=gene6535;Dbxref=GeneID:1101914;Name=SC9C7.11c;gbkey=Gene;gene=SC9C7.11c;gene_biotype=protein_coding;gene_synonym=SC9C7.11c;locus_tag=SCO6475
NC_003888.3	RefSeq	CDS	7164555	7166360	.	-	0	ID=cds6410;Parent=gene6535;Dbxref=Genbank:NP_630558.1,GeneID:1101914;Name=NP_630558.1;Note=SC9C7.11c%2C probable oxidoreductase%2C len: 601aa%3B similar to many eg. TR:Q45815 (EMBL:M31799) NAD-dependent beta-hydroxybutyryl coenzyme dehydrogenase from Clostridium acetobutylicum (282 aa) fasta scores%3B opt: 801%2C z-score: 936.4%2C E(): 0%2C (41.1%25 identity in 280 aa overlap). Appears to be a fusion of two dehydrogesase as each half contains Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase.;gbkey=CDS;gene=SC9C7.11c;product=oxidoreductase;protein_id=NP_630558.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7164567	7165397	.	-	.	ID=id8479;Dbxref=GeneID:1101914;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase.;gbkey=misc_feature;gene=SC9C7.11c
NC_003888.3	RefSeq	sequence_feature	7165485	7166315	.	-	.	ID=id8480;Dbxref=GeneID:1101914;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C score 326.70%2C E-value 2.7e-94;gbkey=misc_feature;gene=SC9C7.11c
NC_003888.3	RefSeq	gene	7166743	7167336	.	+	.	ID=gene6536;Dbxref=GeneID:1101915;Name=SC9C7.12;gbkey=Gene;gene=SC9C7.12;gene_biotype=protein_coding;gene_synonym=SC9C7.12;locus_tag=SCO6476
NC_003888.3	RefSeq	CDS	7166743	7167336	.	+	0	ID=cds6411;Parent=gene6536;Dbxref=Genbank:NP_630559.1,GeneID:1101915;Name=NP_630559.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;gene=SC9C7.12;product=adenylosuccinate lyase;protein_id=NP_630559.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7166776	7166778	.	+	.	ID=id8481;Dbxref=GeneID:1101915;Note=TTA leucine codon%3B potential target for action of bldA;gbkey=misc_feature;gene=SC9C7.12
NC_003888.3	RefSeq	gene	7167374	7167913	.	-	.	ID=gene6537;Dbxref=GeneID:1101916;Name=SC9C7.13c;gbkey=Gene;gene=SC9C7.13c;gene_biotype=protein_coding;gene_synonym=SC9C7.13c;locus_tag=SCO6477
NC_003888.3	RefSeq	CDS	7167374	7167913	.	-	0	ID=cds6412;Parent=gene6537;Dbxref=Genbank:NP_630560.1,GeneID:1101916;Name=NP_630560.1;Note=SC9C7.13c%2C unknown%2C len: 179 aa%3B similar to TR:O32075 (EMBL:Z99119) hypothetical protein from Bacillus subtilis (173 aa) fasta scores%3B opt: 261%2C z-score: 298.5%2C E(): 2.4e-09%2C (32.9%25 identity in 170 aa overlap). Contains a region of weak similarity to Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SC9C7.13c;product=hypothetical protein;protein_id=NP_630560.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7167455	7167886	.	-	.	ID=id8482;Dbxref=GeneID:1101916;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=misc_feature;gene=SC9C7.13c
NC_003888.3	RefSeq	gene	7167910	7168308	.	-	.	ID=gene6538;Dbxref=GeneID:1101917;Name=SC9C7.14c;gbkey=Gene;gene=SC9C7.14c;gene_biotype=protein_coding;gene_synonym=SC9C7.14c;locus_tag=SCO6478
NC_003888.3	RefSeq	CDS	7167910	7168308	.	-	0	ID=cds6413;Parent=gene6538;Dbxref=Genbank:NP_630561.1,GeneID:1101917;Name=NP_630561.1;Note=SC9C7.14c%2C conserved hypothetical protein%2C len: 132aa%3B similar to many hypotheticals eg. TR:P75896 (EMBL:AE000202) from Escherichia coli (128 aa) fasta scores%3B opt: 249%2C z-score: 350.3%2C E(): 3.2e-12%2C (39.2%25 identity in 125 aa overlap). Contains Pfam match to entry PF01042 DUF10%2C Domain of unknown function.;gbkey=CDS;gene=SC9C7.14c;product=hypothetical protein;protein_id=NP_630561.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7167919	7168278	.	-	.	ID=id8483;Dbxref=GeneID:1101917;Note=Pfam match to entry PF01042 DUF10%2C Domain of unknown function.;gbkey=misc_feature;gene=SC9C7.14c
NC_003888.3	RefSeq	gene	7168375	7169964	.	-	.	ID=gene6539;Dbxref=GeneID:1101918;Name=SC9C7.15c;gbkey=Gene;gene=SC9C7.15c;gene_biotype=protein_coding;gene_synonym=SC9C7.15c;locus_tag=SCO6479
NC_003888.3	RefSeq	CDS	7168375	7169964	.	-	0	ID=cds6414;Parent=gene6539;Dbxref=Genbank:NP_630562.1,GeneID:1101918;Name=NP_630562.1;Note=SC9C7.15c%2C probable  peptidase%2C len: 529aa%3B similar to many eg. TR:Q54410(EMBL:L27466)  tripeptidyl aminopeptidase from Streptomyces lividans 66 (537 aa) fasta scores%3B opt: 1362%2C z-score: 1170.0%2C E(): 0%2C (43.2%25 identity in 526 aa overlap)%2C has probable N-terminal signal sequence. Contains Pfam match to entry PF00561 abhydrolase%2C alpha /beta hydrolase fold. Also similar to TR:O69831 (EMBL:AL023517) from Streptomyces coelicolor cosmid 1B5 (543 aa) fasta scores%3B opt: 1205%2C z-score: 1105.7%2C E(): 0%2C (42.3%25 identity in 541 aa overlap).;gbkey=CDS;gene=SC9C7.15c;product=peptidase;protein_id=NP_630562.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7168522	7169598	.	-	.	ID=id8484;Dbxref=GeneID:1101918;Note=Pfam match to entry PF00561 abhydrolase%2C alpha /beta hydrolase fold.;gbkey=misc_feature;gene=SC9C7.15c
NC_003888.3	RefSeq	gene	7170144	7170443	.	-	.	ID=gene6540;Dbxref=GeneID:1101919;Name=SC9C7.16c;gbkey=Gene;gene=SC9C7.16c;gene_biotype=protein_coding;gene_synonym=SC9C7.16c;locus_tag=SCO6480
NC_003888.3	RefSeq	CDS	7170144	7170443	.	-	0	ID=cds6415;Parent=gene6540;Dbxref=Genbank:NP_630563.1,GeneID:1101919;Name=NP_630563.1;Note=SC9C7.16c%2C unknown%2C len: 99 aa;gbkey=CDS;gene=SC9C7.16c;product=hypothetical protein;protein_id=NP_630563.1;transl_table=11
NC_003888.3	RefSeq	gene	7170517	7171563	.	-	.	ID=gene6541;Dbxref=GeneID:1101920;Name=SC9C7.17c;gbkey=Gene;gene=SC9C7.17c;gene_biotype=protein_coding;gene_synonym=SC9C7.17c;locus_tag=SCO6481
NC_003888.3	RefSeq	CDS	7170517	7171563	.	-	0	ID=cds6416;Parent=gene6541;Dbxref=Genbank:NP_630564.1,GeneID:1101920;Name=NP_630564.1;Note=SC9C7.17c%2C conserved hypothetical protein%2C len: 348aa%3B similar to several hypothetical proteins eg. SW:Y0BN_MYCTU from Mycobacterium tuberculosis (340 aa) fasta scores%3B opt: 998%2C z-score: 1321.8%2C E(): 0%2C (47.6%25 identity in 355 aa overlap).;gbkey=CDS;gene=SC9C7.17c;product=hypothetical protein;protein_id=NP_630564.1;transl_table=11
NC_003888.3	RefSeq	gene	7171800	7172243	.	+	.	ID=gene6542;Dbxref=GeneID:1101921;Name=SC9C7.18;gbkey=Gene;gene=SC9C7.18;gene_biotype=protein_coding;gene_synonym=SC9C7.18;locus_tag=SCO6482
NC_003888.3	RefSeq	CDS	7171800	7172243	.	+	0	ID=cds6417;Parent=gene6542;Dbxref=Genbank:NP_630565.1,GeneID:1101921;Name=NP_630565.1;Note=SC9C7.18%2C conserved hypothetical protein%2C len: 348 aa%3B similar to two hypothetical proteins e.g. TR:O69685 (EMBL:AL022121) Mycobacterium tuberculosis RV03718c or MTV025.066c%2C 147 aa%3B fasta scores%3B opt: 475%2C z-score: 768.3%2C E(): 0%2C (52.1%25 identity in 146 aa overlap);gbkey=CDS;gene=SC9C7.18;product=hypothetical protein;protein_id=NP_630565.1;transl_table=11
NC_003888.3	RefSeq	gene	7172394	7174841	.	+	.	ID=gene6543;Dbxref=GeneID:1101922;Name=SC9C7.19;gbkey=Gene;gene=SC9C7.19;gene_biotype=protein_coding;gene_synonym=SC9C7.19;locus_tag=SCO6483
NC_003888.3	RefSeq	CDS	7172394	7174841	.	+	0	ID=cds6418;Parent=gene6543;Dbxref=Genbank:NP_630566.1,GeneID:1101922;Name=NP_630566.1;Note=SC9C7.19%2C probable efflux protein%2C len: 815aa%3B similar to many%2C several of which are involved in toxin /antibiotic efflux eg. TR:O69070 (EMBL:AF061335) oxytetracycline exporter from Streptomyces rimosus (536 aa) fasta scores%3B opt: 1020%2C z-score: 879.9%2C E(): 0%2C (36.9%25 identity in 542 aa overlap).;gbkey=CDS;gene=SC9C7.19;product=efflux protein;protein_id=NP_630566.1;transl_table=11
NC_003888.3	RefSeq	gene	7174911	7177493	.	+	.	ID=gene6544;Dbxref=GeneID:1101923;Name=SC9C7.20;gbkey=Gene;gene=SC9C7.20;gene_biotype=protein_coding;gene_synonym=SC9C7.20;locus_tag=SCO6484
NC_003888.3	RefSeq	CDS	7174911	7177493	.	+	0	ID=cds6419;Parent=gene6544;Dbxref=Genbank:NP_630567.1,GeneID:1101923;Name=NP_630567.1;Note=SC9C7.20%2C conserved hypothetical protein%2C len: 860aa%3B similar to many hypothetical proteins egs. TR:O86875 (EMBL:U22894) from Streptomyces lividans (547 aa) fasta scores%3B opt: 1000%2C z-score: 738.2%2C E(): 0%2C (40.0%25 identity in 497 aa overlap) and TR:O86807 (EMBL:AL031031) from Streptomyces coelicolor (916 aa) fasta scores%3B opt: 358%2C z-score: 316.9%2C E(): 2.3e-10%2C (27.2%25 identity in 779 aa overlap). Also contains a short region of similarity to TR:Q53897 (EMBL:X60316) AbaA regulatory locus from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 108%2C z-score: 223.2%2C E(): 3.8e-05%2C (38.5%25 identity in 135 aa overlap).;gbkey=CDS;gene=SC9C7.20;product=hypothetical protein;protein_id=NP_630567.1;transl_table=11
NC_003888.3	RefSeq	gene	7177711	7178433	.	+	.	ID=gene6545;Dbxref=GeneID:1101924;Name=SC9C7.21;gbkey=Gene;gene=SC9C7.21;gene_biotype=protein_coding;gene_synonym=SC9C7.21;locus_tag=SCO6485
NC_003888.3	RefSeq	CDS	7177711	7178433	.	+	0	ID=cds6420;Parent=gene6545;Dbxref=Genbank:NP_630568.1,GeneID:1101924;Name=NP_630568.1;Note=SC9C7.21%2C unknown%2C len: 240 aa;gbkey=CDS;gene=SC9C7.21;product=hypothetical protein;protein_id=NP_630568.1;transl_table=11
NC_003888.3	RefSeq	gene	7178603	7179436	.	+	.	ID=gene6546;Dbxref=GeneID:1101925;Name=SC9C7.22;gbkey=Gene;gene=SC9C7.22;gene_biotype=protein_coding;gene_synonym=SC9C7.22;locus_tag=SCO6486
NC_003888.3	RefSeq	CDS	7178603	7179436	.	+	0	ID=cds6421;Parent=gene6546;Dbxref=Genbank:NP_630569.1,GeneID:1101925;Name=NP_630569.1;Note=SC9C7.22%2C possible transport associated protein%2C len: 277aa%3B similar to SW:DPPA_BACSU dppA%2C dipeptide transport protein (274 aa) fasta scores%3B opt: 448%2C z-score: 604.3%2C E(): 2.3e-26%2C (32.3%25 identity in 269 aa overlap).;gbkey=CDS;gene=SC9C7.22;product=transport associated protein;protein_id=NP_630569.1;transl_table=11
NC_003888.3	RefSeq	gene	7179429	7180760	.	+	.	ID=gene6547;Dbxref=GeneID:1101926;Name=SC9C7.23;gbkey=Gene;gene=SC9C7.23;gene_biotype=protein_coding;gene_synonym=SC9C7.23;locus_tag=SCO6487
NC_003888.3	RefSeq	CDS	7179429	7180760	.	+	0	ID=cds6422;Parent=gene6547;Dbxref=Genbank:NP_630570.1,GeneID:1101926;Name=NP_630570.1;Note=SC9C7.23%2C possible aminoacylase%2C len: 443aa%3B similar to many aminoacylases and hypothetical proteins egs. TR:O06234 (EMBL:Z95388) hypothetical protein from Mycobacterium tuberculosis (448 aa) fasta scores%3B opt: 1278%2C z-score: 1467.2%2C E(): 0%2C (47.2%25 identity in 449 aa overlap) and SW:ACY1_PIG aminoacylase I from Sus scrofa (pig) (406 aa) fasta scores%3B opt: 294%2C z-score: 340.6%2C E(): 1.1e-11%2C (27.3%25 identity in 421 aa overlap). Contains PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1.;gbkey=CDS;gene=SC9C7.23;product=hypothetical protein;protein_id=NP_630570.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7179681	7179710	.	+	.	ID=id8485;Dbxref=GeneID:1101926;Note=PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1.;gbkey=misc_feature;gene=SC9C7.23
NC_003888.3	RefSeq	gene	7180803	7182770	.	+	.	ID=gene6548;Dbxref=GeneID:1101927;Name=SC9C7.24;gbkey=Gene;gene=SC9C7.24;gene_biotype=protein_coding;gene_synonym=SC9C7.24;locus_tag=SCO6488
NC_003888.3	RefSeq	CDS	7180803	7182770	.	+	0	ID=cds6423;Parent=gene6548;Dbxref=Genbank:NP_630571.1,GeneID:1101927;Name=NP_630571.1;Note=SC9C7.24%2C possible acyl-peptide hydrolase%2C len: 651aa%3B similar to many acyl-peptide hydrolases and hypothetical proteins egs. TR:Q55413 (EMBL:D64003) hypothetical protein from Synechocystis sp. (strain PCC 6803) (637 aa) fasta scores%3B opt: 1306%2C z-score: 1326.5%2C E(): 0%2C (39.6%25 identity in 647 aa overlap) and TR:P70479 (EMBL:X14915) acyl-peptide hydrolase from Rattus norvegicus (rat) (729 aa) fasta scores%3B opt: 258%2C z-score: 199.2%2C E(): 0.00083%2C (28.2%25 identity in 234 aa overlap).;gbkey=CDS;gene=SC9C7.24;product=acyl-peptide hydrolase;protein_id=NP_630571.1;transl_table=11
NC_003888.3	RefSeq	gene	7182776	7183708	.	+	.	ID=gene6549;Dbxref=GeneID:1101928;Name=SC9C7.25;gbkey=Gene;gene=SC9C7.25;gene_biotype=protein_coding;gene_synonym=SC9C7.25;locus_tag=SCO6489
NC_003888.3	RefSeq	CDS	7182776	7183708	.	+	0	ID=cds6424;Parent=gene6549;Dbxref=Genbank:NP_630572.1,GeneID:1101928;Name=NP_630572.1;Note=SC9C7.25%2C conserved hypothetical protein%2C len: 310 aa%3B similar to several proteins of undefined function egs. TR:P74220 (EMBL:D90913) hypothetical protein from Synechocystis sp. (strain PCC 6803) (301 aa) fasta scores%3B opt: 642%2C z-score: 649.7%2C E(): 6.7e-29%2C (38.8%25 identity in 309 aa overlap) and TR:Q47511 (EMBL:X57583) MccF protein from Escherichia coli plasmid pMCCC7 thought to be involved in self-immunity to translation inhibitor microcin C7 (344 aa) fasta scores%3B opt: 178%2C z-score: 259.5%2C E(): 3.6e-07%2C (25.1%25 identity in 339 aa overlap);gbkey=CDS;gene=SC9C7.25;product=hypothetical protein;protein_id=NP_630572.1;transl_table=11
NC_003888.3	RefSeq	gene	7183718	7184317	.	+	.	ID=gene6550;Dbxref=GeneID:1101929;Name=SC9C7.26;gbkey=Gene;gene=SC9C7.26;gene_biotype=protein_coding;gene_synonym=SC9C7.26;locus_tag=SCO6490
NC_003888.3	RefSeq	CDS	7183718	7184317	.	+	0	ID=cds6425;Parent=gene6550;Dbxref=Genbank:NP_630573.1,GeneID:1101929;Name=NP_630573.1;Note=SC9C7.26%2C possible acetyltransferase%2C len: 199 aa%3B similar to SW:RIMJ_ECOLI ribosomal-protein-alanine acetyltransferase from Escherichia coli (194 aa) fasta scores%3B opt: 248%2C z-score: 351.1%2C E(): 2.9e-12%2C (38.7%25 identity in 111 aa overlap).;gbkey=CDS;gene=SC9C7.26;product=acetyltransferase;protein_id=NP_630573.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7183766	7184221	.	+	.	ID=id8486;Dbxref=GeneID:1101929;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 17.00%2C E-value 0.022;gbkey=misc_feature;gene=SC9C7.26
NC_003888.3	RefSeq	gene	7184289	7184681	.	-	.	ID=gene6551;Dbxref=GeneID:1101930;Name=SC9C7.27c;gbkey=Gene;gene=SC9C7.27c;gene_biotype=protein_coding;gene_synonym=SC9C7.27c;locus_tag=SCO6491
NC_003888.3	RefSeq	CDS	7184289	7184681	.	-	0	ID=cds6426;Parent=gene6551;Dbxref=Genbank:NP_630574.1,GeneID:1101930;Name=NP_630574.1;Note=SC9C7.27c%2C unknown%2C len: 130aa;gbkey=CDS;gene=SC9C7.27c;product=hypothetical protein;protein_id=NP_630574.1;transl_table=11
NC_003888.3	RefSeq	gene	7184832	7186829	.	+	.	ID=gene6552;Dbxref=GeneID:1101931;Name=SC1E6.01;gbkey=Gene;gene=SC1E6.01;gene_biotype=protein_coding;gene_synonym=SC1E6.01,SC9C7.28;locus_tag=SCO6492
NC_003888.3	RefSeq	CDS	7184832	7186829	.	+	0	ID=cds6427;Parent=gene6552;Dbxref=Genbank:NP_733704.1,GeneID:1101931;Name=NP_733704.1;Note=SC1E6.01%2C unknown%2C partial CDS%2C len: >616 aa%2C some similarity to hypothetical protein YPHG_ECOLI (1124 aa)%2C fasta scores%3B opt: 360 z-score: 279.9 E(): 2.6e-08%2C 27.1%25 identity in 310 aa overlap~SC9C7.28%2C partial CDS%2C unknown%2C len: 83 aa%3B constitutes the N-terminus of TR:E1341375 (EMBL:AL033505) hypothetical protein from Streptomyces coelicolor.;gbkey=CDS;gene=SC1E6.01;product=hypothetical protein;protein_id=NP_733704.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7184978	7185081	.	+	.	ID=id8487;Dbxref=GeneID:1101931;Note=Real overlap with SC1E6 (EMBL:AL033505) Streptomyces coelicolor cosmid 1E6.;gbkey=misc_feature;gene=SC1E6.01
NC_003888.3	RefSeq	gene	7186861	7187208	.	-	.	ID=gene6553;Dbxref=GeneID:1101932;Name=SC1E6.02c;gbkey=Gene;gene=SC1E6.02c;gene_biotype=protein_coding;gene_synonym=SC1E6.02c;locus_tag=SCO6493
NC_003888.3	RefSeq	CDS	7186861	7187208	.	-	0	ID=cds6428;Parent=gene6553;Dbxref=Genbank:NP_630575.1,GeneID:1101932;Name=NP_630575.1;Note=SC1E6.02c%2C unknown%2C len: 115 aa;gbkey=CDS;gene=SC1E6.02c;product=hypothetical protein;protein_id=NP_630575.1;transl_table=11
NC_003888.3	RefSeq	gene	7187223	7187840	.	+	.	ID=gene6554;Dbxref=GeneID:1101933;Name=SC1E6.03;gbkey=Gene;gene=SC1E6.03;gene_biotype=protein_coding;gene_synonym=SC1E6.03;locus_tag=SCO6494
NC_003888.3	RefSeq	CDS	7187223	7187840	.	+	0	ID=cds6429;Parent=gene6554;Dbxref=Genbank:NP_630576.1,GeneID:1101933;Name=NP_630576.1;Note=SC1E6.03%2C membrane protein%2C len: 205 aa%3B contains two possible transmembrane domains in centre;gbkey=CDS;gene=SC1E6.03;product=hypothetical protein;protein_id=NP_630576.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7187868	7187912	.	+	.	ID=id8488;Note=hairpin loop with 20 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7187926	7188888	.	-	.	ID=gene6555;Dbxref=GeneID:1101934;Name=SC1E6.04c;gbkey=Gene;gene=SC1E6.04c;gene_biotype=protein_coding;gene_synonym=SC1E6.04c;locus_tag=SCO6495
NC_003888.3	RefSeq	CDS	7187926	7188888	.	-	0	ID=cds6430;Parent=gene6555;Dbxref=Genbank:NP_630577.1,GeneID:1101934;Name=NP_630577.1;Note=SC1E6.04c%2C probable dehydrogenase%2C len: 320 aa%3B similar to Mycobacterial F420-dependent glucose-6-phosphate dehydrogenases e.g. M. smegmatis TR:O68447 (EMBL:AF041061) F420-dependent glucose-6-phosphate dehydrogenase (336 aa)%2C fasta scores%3B opt: 499 z-score: 362.9 E(): 6.2e-13%2C 33.2%25 identity in 331 aa overlap;gbkey=CDS;gene=SC1E6.04c;product=dehydrogenase;protein_id=NP_630577.1;transl_table=11
NC_003888.3	RefSeq	gene	7189075	7190964	.	+	.	ID=gene6556;Dbxref=GeneID:1101935;Name=SC1E6.05;gbkey=Gene;gene=SC1E6.05;gene_biotype=protein_coding;gene_synonym=SC1E6.05;locus_tag=SCO6496
NC_003888.3	RefSeq	CDS	7189075	7190964	.	+	0	ID=cds6431;Parent=gene6556;Dbxref=Genbank:NP_630578.1,GeneID:1101935;Name=NP_630578.1;Note=SC1E6.05%2C probable dehydrogenase%2C len: 629 aa%3B similar to e.g. Mycobacterium smegmatis TR:O52473 (EMBL:AF038423) NADH dehydrogenase (457 aa)%2C fasta scores%3B opt: 499 z-score: 263.3 E(): 2.2e-07%2C 31.2%25 identity in 417 aa overlap. Contains 6x degenerate repeats of the sequence KNQPGGEP(A /G)%3D (P-loop);gbkey=CDS;gene=SC1E6.05;product=dehydrogenase;protein_id=NP_630578.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7190434	7190622	.	+	.	ID=id8489;Dbxref=GeneID:1101935;Note=6x27 bp imperfect repeat;gbkey=repeat_region;gene=SC1E6.05
NC_003888.3	RefSeq	sequence_feature	7190755	7190778	.	+	.	ID=id8490;Dbxref=GeneID:1101935;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1E6.05
NC_003888.3	RefSeq	gene	7190961	7192808	.	+	.	ID=gene6557;Dbxref=GeneID:1101936;Name=tktA2;gbkey=Gene;gene=tktA2;gene_biotype=protein_coding;gene_synonym=tktA2;locus_tag=SCO6497
NC_003888.3	RefSeq	CDS	7190961	7192808	.	+	0	ID=cds6432;Parent=gene6557;Dbxref=Genbank:NP_630579.1,GeneID:1101936;Name=NP_630579.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;gene=tktA2;product=transketolase;protein_id=NP_630579.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7190991	7192763	.	+	.	ID=id8491;Dbxref=GeneID:1101936;Note=Pfam match to entry PF00456 transketolase%2C Transketolase%2C score 397.70%2C E-value 1.1e-115;gbkey=misc_feature;gene=tktA2
NC_003888.3	RefSeq	sequence_feature	7192191	7192241	.	+	.	ID=id8492;Dbxref=GeneID:1101936;Note=PS00802 Transketolase signature 2;gbkey=misc_feature;gene=tktA2
NC_003888.3	RefSeq	gene	7192805	7193764	.	+	.	ID=gene6558;Dbxref=GeneID:1101937;Name=SC1E6.07;gbkey=Gene;gene=SC1E6.07;gene_biotype=protein_coding;gene_synonym=SC1E6.07;locus_tag=SCO6498
NC_003888.3	RefSeq	CDS	7192805	7193764	.	+	0	ID=cds6433;Parent=gene6558;Dbxref=Genbank:NP_630580.1,GeneID:1101937;Name=NP_630580.1;Note=SC1E6.07%2C unknown%2C len: 319 aa%3B similar to hypothetical protein from Mycobacteria e.g. TR:O69697 (EMBL:AL022121) MTV025.078C (346 aa)%2C fasta scores%3B opt: 537 z-score: 578.0 E(): 6.5e-25%2C 34.9%25 identity in 292 aa overlap;gbkey=CDS;gene=SC1E6.07;product=hypothetical protein;protein_id=NP_630580.1;transl_table=11
NC_003888.3	RefSeq	gene	7193830	7194222	.	+	.	ID=gene6559;Dbxref=GeneID:1101938;Name=gvpO;gbkey=Gene;gene=gvpO;gene_biotype=protein_coding;gene_synonym=gvpO;locus_tag=SCO6499
NC_003888.3	RefSeq	CDS	7193830	7194222	.	+	0	ID=cds6434;Parent=gene6559;Dbxref=Genbank:NP_630581.1,GeneID:1101938;Name=NP_630581.1;Note=SC1E6.08%2C gvpO%2C probable gas vesicle synthesis protein%2C len: 130 aa%3B similar to several from Halobacteria e.g. GVO1_HALSA GVPO protein%2C plasmid (120 aa)%2C fasta scores%3B opt: 167 z-score: 285.9 E(): 1.2e-08%2C 30.2%25 identity in 106 aa overlap. Contains 9x degenerate QXS repeat near N-terminus and apparent helix-turn-helix motif at aa 53-74 (Score 1244%2C +3.42 SD);gbkey=CDS;gene=gvpO;product=gas vesicle synthesis protein;protein_id=NP_630581.1;transl_table=11
NC_003888.3	RefSeq	gene	7194294	7194728	.	+	.	ID=gene6560;Dbxref=GeneID:1101939;Name=gvpA;gbkey=Gene;gene=gvpA;gene_biotype=protein_coding;gene_synonym=gvpA;locus_tag=SCO6500
NC_003888.3	RefSeq	CDS	7194294	7194728	.	+	0	ID=cds6435;Parent=gene6560;Dbxref=Genbank:NP_630582.1,GeneID:1101939;Name=NP_630582.1;Note=similar to the gas vesicle synthesis protein GvpA in other bacteria but contains an extended C-terminal tail%3B function in the Streptomyces group is unknown but they contain several homologs of other gas vesicle synthesis proteins;gbkey=CDS;gene=gvpA;product=gas vesicle synthesis-like protein;protein_id=NP_630582.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7194339	7194455	.	+	.	ID=id8493;Dbxref=GeneID:1101939;Note=Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein%2C score 44.20%2C E-value 2.9e-09;gbkey=misc_feature;gene=gvpA
NC_003888.3	RefSeq	sequence_feature	7194342	7194386	.	+	.	ID=id8494;Dbxref=GeneID:1101939;Note=PS00234 Gas vesicles protein GVPa signature 1;gbkey=misc_feature;gene=gvpA
NC_003888.3	RefSeq	gene	7194725	7195498	.	+	.	ID=gene6561;Dbxref=GeneID:1101940;Name=gvpF;gbkey=Gene;gene=gvpF;gene_biotype=protein_coding;gene_synonym=gvpF;locus_tag=SCO6501
NC_003888.3	RefSeq	CDS	7194725	7195498	.	+	0	ID=cds6436;Parent=gene6561;Dbxref=Genbank:NP_630583.1,GeneID:1101940;Name=NP_630583.1;Note=SC1E6.10%2C gvpF%2C probable gas vesicle synthesis protein%2C len: 257 aa%3B some similarity to GVF2_HALSA GVPF protein%2C chromosomal (217 aa)%2C fasta scores%3B opt: 143 z-score: 191.0 E(): 0.0023%2C 27.1%25 identity in 247 aa overlap;gbkey=CDS;gene=gvpF;product=gas vesicle synthesis protein;protein_id=NP_630583.1;transl_table=11
NC_003888.3	RefSeq	gene	7195503	7195766	.	+	.	ID=gene6562;Dbxref=GeneID:1101941;Name=gvpG;gbkey=Gene;gene=gvpG;gene_biotype=protein_coding;gene_synonym=gvpG;locus_tag=SCO6502
NC_003888.3	RefSeq	CDS	7195503	7195766	.	+	0	ID=cds6437;Parent=gene6562;Dbxref=Genbank:NP_630584.1,GeneID:1101941;Name=NP_630584.1;Note=SC1E6.11%2C gvpG%2C probable gas vesicle synthesis protein%2C len: 87 aa%3B simlar to e.g. TR:O68673 (EMBL:AF053765) gas vesicle protein GVPG (88 aa)%2C fasta scores%3B opt: 152 z-score: 269.8 E(): 9.5e-08%2C 49.1%25 identity in 53 aa overlap. Contains probable coiled-coil from aa 37 to 76;gbkey=CDS;gene=gvpG;product=gas vesicle synthesis protein;protein_id=NP_630584.1;transl_table=11
NC_003888.3	RefSeq	gene	7195763	7196482	.	+	.	ID=gene6563;Dbxref=GeneID:1101942;Name=SC1E6.12;gbkey=Gene;gene=SC1E6.12;gene_biotype=protein_coding;gene_synonym=SC1E6.12;locus_tag=SCO6503
NC_003888.3	RefSeq	CDS	7195763	7196482	.	+	0	ID=cds6438;Parent=gene6563;Dbxref=Genbank:NP_630585.1,GeneID:1101942;Name=NP_630585.1;Note=SC1E6.12%2C unknown%2C len: 239 aa%3B contains highly acidic repetitive stretch between aa 120-180 and highly basic repetitive stretch between aa 180-239;gbkey=CDS;gene=SC1E6.12;product=hypothetical protein;protein_id=NP_630585.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7196108	7196254	.	+	.	ID=id8495;Dbxref=GeneID:1101942;Note=9bp imperfect repeats;gbkey=repeat_region;gene=SC1E6.12
NC_003888.3	RefSeq	gene	7196479	7197609	.	+	.	ID=gene6564;Dbxref=GeneID:1101943;Name=SC1E6.13;gbkey=Gene;gene=SC1E6.13;gene_biotype=protein_coding;gene_synonym=SC1E6.13;locus_tag=SCO6504
NC_003888.3	RefSeq	CDS	7196479	7197609	.	+	0	ID=cds6439;Parent=gene6564;Dbxref=Genbank:NP_630586.1,GeneID:1101943;Name=NP_630586.1;Note=SC1E6.13%2C unknown%2C len: 376 aa%3B some similarity in part to YMEL_STRLN Streptomyces lincolnensis hypothetical protein (150 aa)%2C fasta scores%3B opt: 377 z-score: 448.8 E(): 1e-17%2C 36.1%25 identity in 144 aa overlap. Contains highly acidic repetitive region from aa 290-376;gbkey=CDS;gene=SC1E6.13;product=hypothetical protein;protein_id=NP_630586.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7197352	7197591	.	+	.	ID=id8496;Dbxref=GeneID:1101943;Note=9bp imperfect repeats;gbkey=repeat_region;gene=SC1E6.13
NC_003888.3	RefSeq	gene	7197606	7197935	.	+	.	ID=gene6565;Dbxref=GeneID:1101944;Name=gvpJ;gbkey=Gene;gene=gvpJ;gene_biotype=protein_coding;gene_synonym=gvpJ;locus_tag=SCO6505
NC_003888.3	RefSeq	CDS	7197606	7197935	.	+	0	ID=cds6440;Parent=gene6565;Dbxref=Genbank:NP_630587.1,GeneID:1101944;Name=NP_630587.1;Note=SC1E6.14%2C gvpJ%2C probable gas vesicle synthesis protein%2C len: 109 aa%3B similar to e.g. TR:O68669 (EMBL:AF053765) gas vesicle protein GVPJ from Bacillus megaterium (100 aa)%2C fasta scores%3B opt: 358 z-score: 597.2 E(): 5.5e-26%2C 61.6%25 identity in 86 aa overlap. Contains PS00234 Gas vesicles protein GVPa signature 1 and Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein%2C score 60.90%2C E-value 2.8e-14;gbkey=CDS;gene=gvpJ;product=gas vesicle synthesis protein;protein_id=NP_630587.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7197657	7197773	.	+	.	ID=id8497;Dbxref=GeneID:1101944;Note=Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein%2C score 60.90%2C E-value 2.8e-14;gbkey=misc_feature;gene=gvpJ
NC_003888.3	RefSeq	sequence_feature	7197660	7197704	.	+	.	ID=id8498;Dbxref=GeneID:1101944;Note=PS00234 Gas vesicles protein GVPa signature 1;gbkey=misc_feature;gene=gvpJ
NC_003888.3	RefSeq	gene	7197932	7198711	.	+	.	ID=gene6566;Dbxref=GeneID:1101945;Name=gvpL;gbkey=Gene;gene=gvpL;gene_biotype=protein_coding;gene_synonym=gvpL;locus_tag=SCO6506
NC_003888.3	RefSeq	CDS	7197932	7198711	.	+	0	ID=cds6441;Parent=gene6566;Dbxref=Genbank:NP_630588.1,GeneID:1101945;Name=NP_630588.1;Note=SC1E6.15%2C gvpL%2C probable gas vesicle protein%2C len: 504 aa%3B simialar to e.g. GVL1_HALSA GVPL protein%2C plasmid (281 aa)%2C fasta scores%3B opt: 111 z-score: 229.0 E(): 1.8e-05%2C 24.2%25 identity in 264 aa overlap;gbkey=CDS;gene=gvpL;product=gas vesicle protein;protein_id=NP_630588.1;transl_table=11
NC_003888.3	RefSeq	gene	7198708	7198890	.	+	.	ID=gene6567;Dbxref=GeneID:1101946;Name=gvpS;gbkey=Gene;gene=gvpS;gene_biotype=protein_coding;gene_synonym=gvpS;locus_tag=SCO6507
NC_003888.3	RefSeq	CDS	7198708	7198890	.	+	0	ID=cds6442;Parent=gene6567;Dbxref=Genbank:NP_630589.1,GeneID:1101946;Name=NP_630589.1;Note=SC1E6.16%2C gvpS%2C probable gas vesicle synthesis protein%2C len: 60 aa%3B similar to parts of several gas vesicle proteins e.g. Bacillus megaterium TR:O68671 (EMBL:AF053765) gas vesicle protein GVPS (95 aa)%2C fasta scores%3B opt: 163 z-score: 303.6 E(): 1.2e-09%2C 49.1%25 identity in 57 aa overlap%2C and TR:O68669 (EMBL:AF053765) gas vesicle protein GVPJ (100 aa)%2C fasta scores%3B opt: 130 z-score: 256.8 E(): 5.1e-07%2C 45.2%25 identity in 42 aa overlap. Contains Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein%2C score 31.70%2C E-value 1.7e-05;gbkey=CDS;gene=gvpS;product=gas vesicle synthesis protein;protein_id=NP_630589.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7198735	7198851	.	+	.	ID=id8499;Dbxref=GeneID:1101946;Note=Pfam match to entry PF00741 Gas_vesicle%2C Gas vesicle protein%2C score 31.70%2C E-value 1.7e-05;gbkey=misc_feature;gene=gvpS
NC_003888.3	RefSeq	gene	7198892	7199188	.	+	.	ID=gene6568;Dbxref=GeneID:1101947;Name=gvpK;gbkey=Gene;gene=gvpK;gene_biotype=protein_coding;gene_synonym=gvpK;locus_tag=SCO6508
NC_003888.3	RefSeq	CDS	7198892	7199188	.	+	0	ID=cds6443;Parent=gene6568;Dbxref=Genbank:NP_630590.1,GeneID:1101947;Name=NP_630590.1;Note=SC1E6.17%2C gvpK%2C probable gas vesicle synthesis protein%2C len: 98 aa%3B simlar to e.g. Bacillus megaterium TR:O68670 gas vesicle protein GVPK (94 aa)%2C fasta scores%3B opt: 321 z-score: 536.7 E(): 1.3e-22%2C 50.5%25 identity in 93 aa overlap;gbkey=CDS;gene=gvpK;product=gas vesicle synthesis protein;protein_id=NP_630590.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7199170	7199207	.	+	.	ID=id8500;Note=hairpin loop with 18 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7199279	7199449	.	-	.	ID=gene6569;Dbxref=GeneID:1101948;Name=SC1E6.18c;gbkey=Gene;gene=SC1E6.18c;gene_biotype=protein_coding;gene_synonym=SC1E6.18c;locus_tag=SCO6509
NC_003888.3	RefSeq	CDS	7199279	7199449	.	-	0	ID=cds6444;Parent=gene6569;Dbxref=Genbank:NP_630591.1,GeneID:1101948;Name=NP_630591.1;Note=SC1E6.18c%2C small hydrophobic protein%2C len: 56 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC1E6.18c;product=hydrophobic protein;protein_id=NP_630591.1;transl_table=11
NC_003888.3	RefSeq	gene	7199504	7200325	.	-	.	ID=gene6570;Dbxref=GeneID:1101949;Name=SC1E6.19c;gbkey=Gene;gene=SC1E6.19c;gene_biotype=protein_coding;gene_synonym=SC1E6.19c;locus_tag=SCO6510
NC_003888.3	RefSeq	CDS	7199504	7200325	.	-	0	ID=cds6445;Parent=gene6570;Dbxref=Genbank:NP_630592.1,GeneID:1101949;Name=NP_630592.1;Note=SC1E6.19c%2C unknown%2C len: 273 aa%3B similar to hypothetical proteins e.g. M. tuberculosis TR:O53851 (EMBL:AL022004) MTV043.32 (270 aa)%2C fasta scores%3B opt: 1102 z-score: 1628.2 E(): 0%2C 58.6%25 identity in 263 aa overlap%2C and in part%2C to several methyltransferases e.g. PMTA_RHOSH phosphatidylethanolamine N-methyltransferase (203 aa)%2C fasta scores%3B opt: 198 z-score: 248.3 E(): 1.5e-06%2C 37.3%25 identity in 102 aa overlap;gbkey=CDS;gene=SC1E6.19c;product=hypothetical protein;protein_id=NP_630592.1;transl_table=11
NC_003888.3	RefSeq	gene	7200436	7201941	.	-	.	ID=gene6571;Dbxref=GeneID:1101950;Name=SC1E6.20c;gbkey=Gene;gene=SC1E6.20c;gene_biotype=protein_coding;gene_synonym=SC1E6.20c;locus_tag=SCO6511
NC_003888.3	RefSeq	CDS	7200436	7201941	.	-	0	ID=cds6446;Parent=gene6571;Dbxref=Genbank:NP_630593.1,GeneID:1101950;Name=NP_630593.1;Note=SC1E6.20c%2C unknown%2C len: 501 aa%3B similar to two hypothetical proteins from Rhodococcus erythropolis: TR:P72262 (EMBL:Z82004) ORF8 (487 aa)%2C fasta scores%3B opt: 1098 z-score: 762.9 E(): 0%2C 45.5%25 identity in 488 aa overlap%2C and TR:P72269 (EMBL:Z82005) ORF8 (487 aa)%2C fasta scores%3B opt: 1060 z-score: 717.1 E(): 1.2e-32%2C 41.7%25 identity in 487 aa overlap. Contains Pfam match to entry PF00781 DAGKc%2C Diacylglycerol kinase catalytic domain (presumed)%2C score 31.00%2C E-value 1.3e-05;gbkey=CDS;gene=SC1E6.20c;product=hypothetical protein;protein_id=NP_630593.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7200967	7201305	.	-	.	ID=id8501;Dbxref=GeneID:1101950;Note=Pfam match to entry PF00781 DAGKc%2C Diacylglycerol kinase catalytic domain (presumed)%2C score 31.00%2C E-value 1.3e-05;gbkey=misc_feature;gene=SC1E6.20c
NC_003888.3	RefSeq	gene	7202065	7203684	.	+	.	ID=gene6572;Dbxref=GeneID:1101951;Name=SC1E6.21;gbkey=Gene;gene=SC1E6.21;gene_biotype=protein_coding;gene_synonym=SC1E6.21;locus_tag=SCO6512
NC_003888.3	RefSeq	CDS	7202065	7203684	.	+	0	ID=cds6447;Parent=gene6572;Dbxref=Genbank:NP_630594.1,GeneID:1101951;Name=NP_630594.1;Note=SC1E6.21%2C probable ABC transporter ATP-binding protein%2C len: 539 aa%3B similar to many e.g. TLRC_STRFR tylosin resistance ATP-binding protein TLRC (548 aa)%2C fasta scores%3B opt: 449 z-score: 533.0 E(): 2.1e-22%2C 33.0%25 identity in 542 aa overlap. Contains 2x PS00017 ATP /GTP-binding site motif A (P-loop) and 2x Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C scores 125.80%2C E-value 8.1e-34%2C and 69.10%2C E-value 9.1e-17;gbkey=CDS;gene=SC1E6.21;product=ABC transporter ATP-binding protein;protein_id=NP_630594.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7202152	7202769	.	+	.	ID=id8502;Dbxref=GeneID:1101951;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 125.80%2C E-value 8.1e-34;gbkey=misc_feature;gene=SC1E6.21
NC_003888.3	RefSeq	sequence_feature	7202173	7202196	.	+	.	ID=id8503;Dbxref=GeneID:1101951;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1E6.21
NC_003888.3	RefSeq	sequence_feature	7203133	7203615	.	+	.	ID=id8504;Dbxref=GeneID:1101951;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 69.10%2C E-value 9.1e-17;gbkey=misc_feature;gene=SC1E6.21
NC_003888.3	RefSeq	sequence_feature	7203154	7203177	.	+	.	ID=id8505;Dbxref=GeneID:1101951;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1E6.21
NC_003888.3	RefSeq	gene	7203714	7204835	.	-	.	ID=gene6573;Dbxref=GeneID:1101952;Name=SC1E6.22c;gbkey=Gene;gene=SC1E6.22c;gene_biotype=protein_coding;gene_synonym=SC1E6.22c;locus_tag=SCO6513
NC_003888.3	RefSeq	CDS	7203714	7204835	.	-	0	ID=cds6448;Parent=gene6573;Dbxref=Genbank:NP_630595.1,GeneID:1101952;Name=NP_630595.1;Note=SC1E6.22c%2C unknown%2C len: 373 aa%3B similar to a hypothetical protein from M. tuberculosis TR:O06183 (EMBL:Z95387) MTCY1A10.03C (374 aa)%2C fasta scores%3B opt: 425 z-score: 395.8 E(): 9.2e-15%2C 30.2%25 identity in 371 aa overlap;gbkey=CDS;gene=SC1E6.22c;product=hypothetical protein;protein_id=NP_630595.1;transl_table=11
NC_003888.3	RefSeq	gene	7204898	7205176	.	+	.	ID=gene6574;Dbxref=GeneID:1101953;Name=SC1E6.23;gbkey=Gene;gene=SC1E6.23;gene_biotype=protein_coding;gene_synonym=SC1E6.23;locus_tag=SCO6514
NC_003888.3	RefSeq	CDS	7204898	7205176	.	+	0	ID=cds6449;Parent=gene6574;Dbxref=Genbank:NP_630596.1,GeneID:1101953;Name=NP_630596.1;Note=SC1E6.23%2C unknown%2C len: 92 aa;gbkey=CDS;gene=SC1E6.23;product=hypothetical protein;protein_id=NP_630596.1;transl_table=11
NC_003888.3	RefSeq	gene	7205258	7205800	.	-	.	ID=gene6575;Dbxref=GeneID:1101954;Name=pfpI;gbkey=Gene;gene=pfpI;gene_biotype=protein_coding;gene_synonym=pfpI;locus_tag=SCO6515
NC_003888.3	RefSeq	CDS	7205258	7205800	.	-	0	ID=cds6450;Parent=gene6575;Dbxref=Genbank:NP_630597.1,GeneID:1101954;Name=NP_630597.1;Note=SC1E6.24c%2C pfpI%2C probable protease%2C len: 180 aa%3B similar to e.g. PFPI_PYRFU protease I (EC 3.2.-.-) (166 aa)%2C fasta scores%3B opt: 413 z-score: 411.9 E(): 1.2e-15%2C 41.3%25 identity in 172 aa overlap;gbkey=CDS;gene=pfpI;product=protease;protein_id=NP_630597.1;transl_table=11
NC_003888.3	RefSeq	gene	7205826	7206224	.	-	.	ID=gene6576;Dbxref=GeneID:1101955;Name=SC1E6.25c;gbkey=Gene;gene=SC1E6.25c;gene_biotype=protein_coding;gene_synonym=SC1E6.25c,SC5C7.01c;locus_tag=SCO6516
NC_003888.3	RefSeq	CDS	7205826	7206224	.	-	0	ID=cds6451;Parent=gene6576;Dbxref=Genbank:NP_733705.1,GeneID:1101955;Name=NP_733705.1;Note=SC5C7.01c%2C unknown%2C partial CDS%2C len: >45 aa~SC1E6.25c%2C unknown%2C partial CDS%2C len: > 123 aa%3B continuation of SC5C7.01c;gbkey=CDS;gene=SC1E6.25c;product=hypothetical protein;protein_id=NP_733705.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7206230	7206234	.	-	.	ID=id8506;Note=possible RBS upstream of SC5C7.01c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7206424	7206427	.	+	.	ID=id8507;Note=possible RBS upstream of SC5C7.02;gbkey=RBS
NC_003888.3	RefSeq	gene	7206433	7208823	.	+	.	ID=gene6577;Dbxref=GeneID:1101956;Name=SC5C7.02;gbkey=Gene;gene=SC5C7.02;gene_biotype=protein_coding;gene_synonym=SC5C7.02;locus_tag=SCO6517
NC_003888.3	RefSeq	CDS	7206433	7208823	.	+	0	ID=cds6452;Parent=gene6577;Dbxref=Genbank:NP_630598.1,GeneID:1101956;Name=NP_630598.1;Note=SC5C7.02%2C uvrA-like protein%2C len: 796 aa%3B similar to Streptomyces peucetius TR:Q54827 (EMBL:L76359) daunorubicin resistance protein drrC (764 aa)%2C fasta scores%3B opt: 2051 z-score: 2702.2 E(): 0%2C 51.1%25 identity in 775 aa overlap%2C and to many uvrA proteins e.g. UVRA_NEIGO excinuclease ABC subunit A (950 aa)%2C fasta scores%3B opt: 412 z-score: 1697.0 E(): 0%2C 34.1%25 identity in 953 aa overlap. Contains 2x PS00017 ATP /GTP-binding%3D match to entry PF00005 ABC_tran%2C ABC transporters%2C scores 42.40%2C E-value 1.7e-10 and 71.20%2C E-value 2.2e-17;gbkey=CDS;gene=SC5C7.02;product=uvrA-like protein;protein_id=NP_630598.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7206559	7207788	.	+	.	ID=id8508;Dbxref=GeneID:1101956;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 42.40%2C E-value 1.7e-10;gbkey=misc_feature;gene=SC5C7.02
NC_003888.3	RefSeq	sequence_feature	7206580	7206603	.	+	.	ID=id8509;Dbxref=GeneID:1101956;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5C7.02
NC_003888.3	RefSeq	sequence_feature	7207981	7208715	.	+	.	ID=id8510;Dbxref=GeneID:1101956;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 71.20%2C E-value 2.2e-17;gbkey=misc_feature;gene=SC5C7.02
NC_003888.3	RefSeq	sequence_feature	7208002	7208025	.	+	.	ID=id8511;Dbxref=GeneID:1101956;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5C7.02
NC_003888.3	RefSeq	gene	7208891	7209373	.	+	.	ID=gene6578;Dbxref=GeneID:1101957;Name=SC5C7.03;gbkey=Gene;gene=SC5C7.03;gene_biotype=protein_coding;gene_synonym=SC5C7.03;locus_tag=SCO6518
NC_003888.3	RefSeq	CDS	7208891	7209373	.	+	0	ID=cds6453;Parent=gene6578;Dbxref=Genbank:NP_630599.1,GeneID:1101957;Name=NP_630599.1;Note=SC5C7.03%2C probable transcriptional regulator%2C len: 160 aa%3B similar in N-terminus to many e.g. RAMA_ENTCL transcriptional activator RamA (113 aa)%2C fasta scores%3B opt: 175 z-score: 255.3 E(): 5.7e-07%2C 32.3%25 identity in 96 aa overlap. C-terminal 50 aa are unique. Contains Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 71.40%2C E-value 1.9e-17;gbkey=CDS;gene=SC5C7.03;product=transcriptional regulator;protein_id=NP_630599.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7208960	7209220	.	+	.	ID=id8512;Dbxref=GeneID:1101957;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 71.40%2C E-value 1.9e-17;gbkey=misc_feature;gene=SC5C7.03
NC_003888.3	RefSeq	gene	7209379	7209795	.	+	.	ID=gene6579;Dbxref=GeneID:1101958;Name=SC5C7.04;gbkey=Gene;gene=SC5C7.04;gene_biotype=protein_coding;gene_synonym=SC5C7.04;locus_tag=SCO6519
NC_003888.3	RefSeq	CDS	7209379	7209795	.	+	0	ID=cds6454;Parent=gene6579;Dbxref=Genbank:NP_630600.1,GeneID:1101958;Name=NP_630600.1;Note=SC5C7.04%2C possible lyase%2C similar to e.g. LGUL_HAEIN lactoylglutathione lyase (EC 4.4.1.5) (135 aa)%2C fasta scores%3B opt: 124 z-score: 215.2 E(): 9.7e-05%2C 29.0%25 identity in 131 aa overlap;gbkey=CDS;gene=SC5C7.04;product=lyase;protein_id=NP_630600.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7210066	7210069	.	+	.	ID=id8513;Note=possible RBS upstream of SC5C7.05;gbkey=RBS
NC_003888.3	RefSeq	gene	7210082	7210882	.	+	.	ID=gene6580;Dbxref=GeneID:1101959;Name=SC5C7.05;gbkey=Gene;gene=SC5C7.05;gene_biotype=protein_coding;gene_synonym=SC5C7.05;locus_tag=SCO6520
NC_003888.3	RefSeq	CDS	7210082	7210882	.	+	0	ID=cds6455;Parent=gene6580;Dbxref=Genbank:NP_630601.1,GeneID:1101959;Name=NP_630601.1;Note=SC5C7.05%2C probable RNA polymerase sigma factor%2C len: 266 aa%3B simlar to S. coelicolor sigma factors of the SigB subfamily e.g. TR:O52313 (EMBL:AF036131) RNA polymerase secondary sigma factor SigG (263 aa)%2C fasta scores%3B opt: 1258 z-score: 1540.5 E(): 0%2C 72.9%25 identity in 251 aa overlap%2C and to RPOF_STRAU RNA polymerase sigma-F factor (297 aa)%2C fasta scores%3B opt: 713 z-score: 858.3 E(): 0%2C 42.6%25 identity in 312 aa overlap. Possible alternative start 216 bp upstream%2C not supported by FramePlot. Contains helix-turn-helix motif at aa 228-249 (Score 2104%2C +6.35 SD) and Pfam match to entry PF00140 sigma70%2C Sigma-70 factors%2C score 210.40%2C E-value 2.8e-59;gbkey=CDS;gene=SC5C7.05;product=RNA polymerase sigma factor;protein_id=NP_630601.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7210181	7210849	.	+	.	ID=id8514;Dbxref=GeneID:1101959;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factors%2C score 210.40%2C E-value 2.8e-59;gbkey=misc_feature;gene=SC5C7.05
NC_003888.3	RefSeq	ribosome_entry_site	7211008	7211013	.	+	.	ID=id8515;Note=possible RBS upstream of SC3C7.06;gbkey=RBS
NC_003888.3	RefSeq	gene	7211022	7211978	.	+	.	ID=gene6581;Dbxref=GeneID:1101960;Name=SC5C7.06;gbkey=Gene;gene=SC5C7.06;gene_biotype=protein_coding;gene_synonym=SC5C7.06;locus_tag=SCO6521
NC_003888.3	RefSeq	CDS	7211022	7211978	.	+	0	ID=cds6456;Parent=gene6581;Dbxref=Genbank:NP_630602.1,GeneID:1101960;Name=NP_630602.1;Note=SC5C7.06%2C probable hypothetical protein%2C len: 318 aa%3B contains N-terminal signal sequence;gbkey=CDS;gene=SC5C7.06;product=hypothetical protein;protein_id=NP_630602.1;transl_table=11
NC_003888.3	RefSeq	gene	7212047	7213489	.	+	.	ID=gene6582;Dbxref=GeneID:1101961;Name=SC5C7.07;gbkey=Gene;gene=SC5C7.07;gene_biotype=protein_coding;gene_synonym=SC5C7.07;locus_tag=SCO6522
NC_003888.3	RefSeq	CDS	7212047	7213489	.	+	0	ID=cds6457;Parent=gene6582;Dbxref=Genbank:NP_630603.1,GeneID:1101961;Name=NP_630603.1;Note=SC5C7.07%2C unknown%2C len: 480 aa;gbkey=CDS;gene=SC5C7.07;product=hypothetical protein;protein_id=NP_630603.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7213474	7213477	.	+	.	ID=id8516;Dbxref=GeneID:1101961;Note=possible RBS upstream of SC5C7.08;gbkey=RBS;gene=SC5C7.07
NC_003888.3	RefSeq	gene	7213486	7214526	.	+	.	ID=gene6583;Dbxref=GeneID:1101962;Name=SC5C7.08;gbkey=Gene;gene=SC5C7.08;gene_biotype=protein_coding;gene_synonym=SC5C7.08;locus_tag=SCO6523
NC_003888.3	RefSeq	CDS	7213486	7214526	.	+	0	ID=cds6458;Parent=gene6583;Dbxref=Genbank:NP_630604.1,GeneID:1101962;Name=NP_630604.1;Note=SC5C7.08%2C unknown%2C len: 346 aa%3B similar to hypothetical proteins from M. tuberculosis YZ34_MYCTU MTCY31.34 (372 aa)%2C fasta scores%3B opt: 678 z-score: 492.0 E(): 3.7e-20%2C 42.3%25 identity in 298 aa overlap%2C and to Saccharomyces cerevisiae TR:Q02883 (EMBL:U43281) LPG6P (468 aa)%2C fasta scores%3B opt: 491 z-score: 495.9 E(): 2.2e-20%2C 35.5%25 identity in 262 aa overlap;gbkey=CDS;gene=SC5C7.08;product=hypothetical protein;protein_id=NP_630604.1;transl_table=11
NC_003888.3	RefSeq	gene	7214569	7215195	.	-	.	ID=gene6584;Dbxref=GeneID:1101963;Name=SC5C7.09c;gbkey=Gene;gene=SC5C7.09c;gene_biotype=protein_coding;gene_synonym=SC5C7.09c;locus_tag=SCO6524
NC_003888.3	RefSeq	CDS	7214569	7215195	.	-	0	ID=cds6459;Parent=gene6584;Dbxref=Genbank:NP_630605.1,GeneID:1101963;Name=NP_630605.1;Note=SC5C7.09c%2C probable integral membrane protein%2C len: 208 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5C7.09c;product=hypothetical protein;protein_id=NP_630605.1;transl_table=11
NC_003888.3	RefSeq	gene	7215192	7215959	.	-	.	ID=gene6585;Dbxref=GeneID:1101964;Name=SC5C7.10c;gbkey=Gene;gene=SC5C7.10c;gene_biotype=protein_coding;gene_synonym=SC5C7.10c;locus_tag=SCO6525
NC_003888.3	RefSeq	CDS	7215192	7215959	.	-	0	ID=cds6460;Parent=gene6585;Dbxref=Genbank:NP_630606.1,GeneID:1101964;Name=NP_630606.1;Note=SC5C7.10c%2C unknown%2C len: 255 aa%3B similar to hypothetical proteins from many organisms e.g. M. tuberculosis YZ34_MYCTU MTCY31.34 (372 aa)%2C fasta scores%3B opt: 221 z-score: 293.2 E(): 4.4e-09%2C 30.7%25 identity in 251 aa overlap;gbkey=CDS;gene=SC5C7.10c;product=hypothetical protein;protein_id=NP_630606.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7215202	7215207	.	-	.	ID=id8517;Dbxref=GeneID:1101964;Note=possible RBS upstream of SC5C7.09c;gbkey=RBS;gene=SC5C7.10c
NC_003888.3	RefSeq	ribosome_entry_site	7215966	7215970	.	-	.	ID=id8518;Note=possible RBS upstream of SC5C7.10c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7216047	7216050	.	+	.	ID=id8519;Note=possible RBS upstream of SC5C7.11;gbkey=RBS
NC_003888.3	RefSeq	gene	7216060	7216461	.	+	.	ID=gene6586;Dbxref=GeneID:1101965;Name=SC5C7.11;gbkey=Gene;gene=SC5C7.11;gene_biotype=protein_coding;gene_synonym=SC5C7.11;locus_tag=SCO6526
NC_003888.3	RefSeq	CDS	7216060	7216461	.	+	0	ID=cds6461;Parent=gene6586;Dbxref=Genbank:NP_630607.1,GeneID:1101965;Name=NP_630607.1;Note=SC5C7.11%2C unknown%2C len: 133 aa;gbkey=CDS;gene=SC5C7.11;product=hypothetical protein;protein_id=NP_630607.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7216564	7216567	.	+	.	ID=id8520;Note=possible RBS upsteam of SC5C7.12;gbkey=RBS
NC_003888.3	RefSeq	gene	7216569	7218722	.	+	.	ID=gene6587;Dbxref=GeneID:1101966;Name=SC5C7.12;gbkey=Gene;gene=SC5C7.12;gene_biotype=protein_coding;gene_synonym=SC5C7.12;locus_tag=SCO6527
NC_003888.3	RefSeq	CDS	7216569	7218722	.	+	0	ID=cds6462;Parent=gene6587;Dbxref=Genbank:NP_630608.1,GeneID:1101966;Name=NP_630608.1;Note=SC5C7.12%2C probable membrane protein%2C len: 717 aa%3B contains large hydrophobic domain at N-terminus;gbkey=CDS;gene=SC5C7.12;product=hypothetical protein;protein_id=NP_630608.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7218789	7218792	.	+	.	ID=id8521;Note=possible RBS upstream of SC5C7.13;gbkey=RBS
NC_003888.3	RefSeq	gene	7218804	7220228	.	+	.	ID=gene6588;Dbxref=GeneID:1101967;Name=SC5C7.13;gbkey=Gene;gene=SC5C7.13;gene_biotype=protein_coding;gene_synonym=SC5C7.13;locus_tag=SCO6528
NC_003888.3	RefSeq	CDS	7218804	7220228	.	+	0	ID=cds6463;Parent=gene6588;Dbxref=Genbank:NP_630609.1,GeneID:1101967;Name=NP_630609.1;Note=SC5C7.13%2C probable integral membrane transport protein%2C len: 474 aa%3B similar to many e.g. ARCD_PSEAE arginine/ornithine antiporter (482 aa)%2C fasta scores%3B opt: 560 z-score: 470.6 E(): 5.8e-19%2C 28.9%25 identity in 439 aa overlap;gbkey=CDS;gene=SC5C7.13;product=integral membrane transport protein;protein_id=NP_630609.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7220297	7220301	.	+	.	ID=id8522;Note=possible RBS upstream of SC5C7.14;gbkey=RBS
NC_003888.3	RefSeq	gene	7220309	7221370	.	+	.	ID=gene6589;Dbxref=GeneID:1101968;Name=SC5C7.14;gbkey=Gene;gene=SC5C7.14;gene_biotype=protein_coding;gene_synonym=SC5C7.14;locus_tag=SCO6529
NC_003888.3	RefSeq	CDS	7220309	7221370	.	+	0	ID=cds6464;Parent=gene6589;Dbxref=Genbank:NP_630610.1,GeneID:1101968;Name=NP_630610.1;Note=SC5C7.14%2C probable ATP/GTP binding protein%2C len: 353 aa%3B similar to TR:Q9RV59 (EMBL:AE001966) Deinococcus radiodurans conserved hypothetical protein DR1171%2C 340 aa%3B fasta scores: opt: 453 Z-score: 502.2 E(): 2.4e-20%3B 33.692%25 identity in 279 aa overlap. Contains Prosite match to entry PS00017 ATP/GTP-binding;gbkey=CDS;gene=SC5C7.14;product=ATP/GTP binding protein;protein_id=NP_630610.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7220393	7220416	.	+	.	ID=id8523;Dbxref=GeneID:1101968;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5C7.14
NC_003888.3	RefSeq	ribosome_entry_site	7221355	7221359	.	+	.	ID=id8524;Dbxref=GeneID:1101968;Note=possible RBS upstream of SC5C7.15;gbkey=RBS;gene=SC5C7.14
NC_003888.3	RefSeq	gene	7221367	7223199	.	+	.	ID=gene6590;Dbxref=GeneID:1101969;Name=SC5C7.15;gbkey=Gene;gene=SC5C7.15;gene_biotype=protein_coding;gene_synonym=SC5C7.15;locus_tag=SCO6530
NC_003888.3	RefSeq	CDS	7221367	7223199	.	+	0	ID=cds6465;Parent=gene6590;Dbxref=Genbank:NP_630611.1,GeneID:1101969;Name=NP_630611.1;Note=SC5C7.15%2C unknown%2C len: 610 aa%3B contains Gln- and Lys-rich N-terminus;gbkey=CDS;gene=SC5C7.15;product=hypothetical protein;protein_id=NP_630611.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7223276	7223279	.	+	.	ID=id8525;Note=possible RBS upstream of SC5C7.16;gbkey=RBS
NC_003888.3	RefSeq	gene	7223286	7223711	.	+	.	ID=gene6591;Dbxref=GeneID:1101970;Name=SC5C7.16;gbkey=Gene;gene=SC5C7.16;gene_biotype=protein_coding;gene_synonym=SC5C7.16;locus_tag=SCO6531
NC_003888.3	RefSeq	CDS	7223286	7223711	.	+	0	ID=cds6466;Parent=gene6591;Dbxref=Genbank:NP_630612.1,GeneID:1101970;Name=NP_630612.1;Note=SC5C7.16%2C probable ATP/GTP binding protein%2C len: 141 aa%3B highly similar to OSMC_ECOLI osmotically inducible protein C (143 aa)%2C fasta scores%3B opt: 330 z-score: 398.2 E(): 6.2e-15%2C 44.5%25 identity in 137 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC5C7.16;product=ATP/GTP binding protein;protein_id=NP_630612.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7223403	7223426	.	+	.	ID=id8526;Dbxref=GeneID:1101970;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5C7.16
NC_003888.3	RefSeq	gene	7223740	7224462	.	-	.	ID=gene6592;Dbxref=GeneID:1101971;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;gene_synonym=narI;locus_tag=SCO6532
NC_003888.3	RefSeq	CDS	7223740	7224462	.	-	0	ID=cds6467;Parent=gene6592;Dbxref=Genbank:NP_630613.1,GeneID:1101971;Name=NP_630613.1;Note=SC5C7.17c%2C narI%2C probable nitrate reductase gamma chain%3B len: 240 aa%3B similar to many e.g. NARI_BACSU nitrate reductase gamma chain (EC 1.7.99.4) (223 aa)%2C fasta scores%3B opt: 664 z-score: 1084.3 E(): 0%2C 41.5%25 identity in 217 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=narI;product=nitrate reductase subunit gamma NarI;protein_id=NP_630613.1;transl_table=11
NC_003888.3	RefSeq	gene	7224459	7224953	.	-	.	ID=gene6593;Dbxref=GeneID:1101972;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;gene_synonym=narJ;locus_tag=SCO6533
NC_003888.3	RefSeq	CDS	7224459	7224953	.	-	0	ID=cds6468;Parent=gene6593;Dbxref=Genbank:NP_630614.1,GeneID:1101972;Name=NP_630614.1;Note=SC5C7.18c%2C narJ%2C probable nitrate reductase delta chain%2C len: 164 aa%3B similar to many e.g. NARJ_BACSU nitrate reductase delta chain (EC 1.7.99.4) (184 aa)%2C fasta scores%3B opt: 208 z-score: 429.0 E(): 1.2e-16%2C 30.1%25 identity in 163 aa overlap;gbkey=CDS;gene=narJ;product=nitrate reductase subunit delta NarJ;protein_id=NP_630614.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7224470	7224473	.	-	.	ID=id8527;Dbxref=GeneID:1101972;Note=possible RBS upstream of narI;gbkey=RBS;gene=narJ
NC_003888.3	RefSeq	gene	7224958	7226553	.	-	.	ID=gene6594;Dbxref=GeneID:1101973;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;gene_synonym=narH;locus_tag=SCO6534
NC_003888.3	RefSeq	CDS	7224958	7226553	.	-	0	ID=cds6469;Parent=gene6594;Dbxref=Genbank:NP_630615.1,GeneID:1101973;Name=NP_630615.1;Note=SC5C7.19c%2C narH%2C probable nitrate reductase beta chain%2C len: 531 aa%3B highly similar to many e.g. NARH_BACSU nitrate reductase beta chain (EC 1.7.99.4) (487 aa)%2C fasta scores%3B opt: 2099 z-score: 2179.2 E(): 0%2C 58.0%25 identity in 495 aa overlap. Contains PS00190 Cytochrome c family heme-binding site signature and Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains%2C score 61.10%2C E-value 1.8e-16;gbkey=CDS;gene=narH;product=nitrate reductase subunit beta NarH;protein_id=NP_630615.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7224962	7224967	.	-	.	ID=id8528;Dbxref=GeneID:1101973;Note=possible RBS upstream of narJ;gbkey=RBS;gene=narH
NC_003888.3	RefSeq	sequence_feature	7225843	7226019	.	-	.	ID=id8529;Dbxref=GeneID:1101973;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 61.10%2C E-value 1.8e-16;gbkey=misc_feature;gene=narH
NC_003888.3	RefSeq	sequence_feature	7226491	7226508	.	-	.	ID=id8530;Dbxref=GeneID:1101973;Note=PS00190 Cytochrome c family heme-binding site signature;gbkey=misc_feature;gene=narH
NC_003888.3	RefSeq	gene	7226553	7230248	.	-	.	ID=gene6595;Dbxref=GeneID:1101974;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;gene_synonym=narG;locus_tag=SCO6535
NC_003888.3	RefSeq	CDS	7226553	7230248	.	-	0	ID=cds6470;Parent=gene6595;Dbxref=Genbank:NP_630616.1,GeneID:1101974;Name=NP_630616.1;Note=SC5C7.20c%2C narG%2C probable nitrate reductase alpha chain%2C len: 1231 aa%3B highly similar to many e.g. NARG_BACSU nitrate reductase alpha chain (EC 1.7.99.4) (1228 aa)%2C fasta scores%3B opt: 4306 z-score: 3216.7 E(): 0%2C 51.5%25 identity in 1235 aa overlap. Contains PS00551 and PS00490 Prokaryotic molybdopterin oxidoreductases signatures 1 and 2 and Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 79.90%2C E-value 1e-24;gbkey=CDS;gene=narG;product=nitrate reductase subunit alpha NarG;protein_id=NP_630616.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7226563	7226569	.	-	.	ID=id8531;Dbxref=GeneID:1101974;Note=possible RBS upstream of narH;gbkey=RBS;gene=narG
NC_003888.3	RefSeq	sequence_feature	7227768	7227959	.	-	.	ID=id8532;Dbxref=GeneID:1101974;Note=Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 79.90%2C E-value 1e-24;gbkey=misc_feature;gene=narG
NC_003888.3	RefSeq	sequence_feature	7227879	7227932	.	-	.	ID=id8533;Dbxref=GeneID:1101974;Note=PS00490 Prokaryotic molybdopterin oxidoreductases signature 2;gbkey=misc_feature;gene=narG
NC_003888.3	RefSeq	sequence_feature	7228128	7228131	.	+	.	ID=id8534;Note=end of true overlap with cosmid 1E6;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7230021	7230077	.	-	.	ID=id8535;Dbxref=GeneID:1101974;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1;gbkey=misc_feature;gene=narG
NC_003888.3	RefSeq	ribosome_entry_site	7230254	7230257	.	-	.	ID=id8536;Note=possible RBS upstream of narG;gbkey=RBS
NC_003888.3	RefSeq	gene	7230397	7231212	.	-	.	ID=gene6596;Dbxref=GeneID:1101975;Name=SC5C7.21c;gbkey=Gene;gene=SC5C7.21c;gene_biotype=protein_coding;gene_synonym=SC5C7.21c;locus_tag=SCO6536
NC_003888.3	RefSeq	CDS	7230397	7231212	.	-	0	ID=cds6471;Parent=gene6596;Dbxref=Genbank:NP_630617.1,GeneID:1101975;Name=NP_630617.1;Note=SC5C7.21c%2C unknown%2C len: 271 aa%3B similar to two S. coelicolor hypothetical proteins SC1F2.04 (E(): 0%2C 51.3%25 identity in 269 aa overlap) and SC1F2.03c (E(): 4.5e-21%2C 44.7%25 identity in 275 aa overlap);gbkey=CDS;gene=SC5C7.21c;product=hypothetical protein;protein_id=NP_630617.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7231223	7231227	.	-	.	ID=id8537;Note=possible RBS upstream of SC5C7.21c;gbkey=RBS
NC_003888.3	RefSeq	gene	7231262	7232125	.	-	.	ID=gene6597;Dbxref=GeneID:1101976;Name=SC5C7.22c;gbkey=Gene;gene=SC5C7.22c;gene_biotype=protein_coding;gene_synonym=SC5C7.22c;locus_tag=SCO6537
NC_003888.3	RefSeq	CDS	7231262	7232125	.	-	0	ID=cds6472;Parent=gene6597;Dbxref=Genbank:NP_630618.1,GeneID:1101976;Name=NP_630618.1;Note=SC5C7.22c%2C unknown%2C len: 287 aa%3B similar to S. coelicolor hypothetical protein SC4G2.03 (E(): 2.2e-08%2C 29.2%25 identity in 257 aa overlap). Contains possible helix-turn-helix motif at aa 29-50 (Score 1251%2C +3.45 SD);gbkey=CDS;gene=SC5C7.22c;product=DNA-binding protein;protein_id=NP_630618.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7232132	7232136	.	-	.	ID=id8538;Note=possible RBS upstream of SC5C7.22c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7232339	7232343	.	+	.	ID=id8539;Note=possible RBS upstream of SC5C7.23;gbkey=RBS
NC_003888.3	RefSeq	gene	7232354	7232779	.	+	.	ID=gene6598;Dbxref=GeneID:1101977;Name=SC5C7.23;gbkey=Gene;gene=SC5C7.23;gene_biotype=protein_coding;gene_synonym=SC5C7.23;locus_tag=SCO6538
NC_003888.3	RefSeq	CDS	7232354	7232779	.	+	0	ID=cds6473;Parent=gene6598;Dbxref=Genbank:NP_630619.1,GeneID:1101977;Name=NP_630619.1;Note=SC5C7.23%2C probable integral membrane protein%2C len: 141 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5C7.23;product=hypothetical protein;protein_id=NP_630619.1;transl_table=11
NC_003888.3	RefSeq	gene	7232761	7233579	.	-	.	ID=gene6599;Dbxref=GeneID:1101978;Name=SC5C7.24c;gbkey=Gene;gene=SC5C7.24c;gene_biotype=protein_coding;gene_synonym=SC5C7.24c;locus_tag=SCO6539
NC_003888.3	RefSeq	CDS	7232761	7233579	.	-	0	ID=cds6474;Parent=gene6599;Dbxref=Genbank:NP_630620.1,GeneID:1101978;Name=NP_630620.1;Note=SC5C7.24c%2C hypothetical protein%2C len: 272 aa%3B similar to TR:Q985F1 (EMBL:AP003012) Rhizobium loti (Mesorhizobium loti) MLL7704 protein%2C 270 aa%3B fasta scores: opt: 786 Z-score: 877.1 E(): 3.2e-41%3B 48.638%25 identity in 257 aa overlap;gbkey=CDS;gene=SC5C7.24c;product=hypothetical protein;protein_id=NP_630620.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7233656	7233660	.	+	.	ID=id8540;Note=possible RBS upstream of SC5C7.25;gbkey=RBS
NC_003888.3	RefSeq	gene	7233669	7233974	.	+	.	ID=gene6600;Dbxref=GeneID:1101979;Name=phhB;gbkey=Gene;gene=phhB;gene_biotype=protein_coding;gene_synonym=SC5C7.25;locus_tag=SCO6540
NC_003888.3	RefSeq	CDS	7233669	7233974	.	+	0	ID=cds6475;Parent=gene6600;Dbxref=Genbank:NP_630621.1,GeneID:1101979;Name=NP_630621.1;Note=4-alpha-hydroxytetrahydrobiopterin dehydratase activity%3B catalyzes the formation of (6R)-6-(L-erythro-1%2C2-dihydroxypropyl)-7%2C8-dihydro-6H-pterin from (6R)-6-(L-erythro-1%2C2-dihydroxypropyl)-5%2C6%2C7%2C8-tetrahydro-4a-hydroxypterin%3B functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction;gbkey=CDS;gene=phhB;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=NP_630621.1;transl_table=11
NC_003888.3	RefSeq	gene	7233979	7234725	.	+	.	ID=gene6601;Dbxref=GeneID:1101980;Name=SC5C7.26;gbkey=Gene;gene=SC5C7.26;gene_biotype=protein_coding;gene_synonym=SC5C7.26;locus_tag=SCO6541
NC_003888.3	RefSeq	CDS	7233979	7234725	.	+	0	ID=cds6476;Parent=gene6601;Dbxref=Genbank:NP_630622.1,GeneID:1101980;Name=NP_630622.1;Note=SC5C7.26%2C unknown%2C len: 248 aa%3B similar to hypothetical proteins and to TR:Q54529 (EMBL:U10405) Streptomyces purpurascens RdmD gene (required for modification on 10-position of aklavinone during anthracycline antibiotic synthesis) (237 aa)%2C fasta scores%3B opt: 162 z-score: 217.3 E(): 7.4e-05%2C 36.1%25 identity in 158 aa overlap;gbkey=CDS;gene=SC5C7.26;product=hypothetical protein;protein_id=NP_630622.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7234782	7234788	.	+	.	ID=id8541;Note=possible RBS upstream of SC5C7.27;gbkey=RBS
NC_003888.3	RefSeq	gene	7234796	7236691	.	+	.	ID=gene6602;Dbxref=GeneID:1101981;Name=SC5C7.27;gbkey=Gene;gene=SC5C7.27;gene_biotype=protein_coding;gene_synonym=SC5C7.27;locus_tag=SCO6542
NC_003888.3	RefSeq	CDS	7234796	7236691	.	+	0	ID=cds6477;Parent=gene6602;Dbxref=Genbank:NP_630623.1,GeneID:1101981;Name=NP_630623.1;Note=SC5C7.27%2C possible  glycosyl hydrolase len: 631 aa%3B similar to two hypothetical proteins from B. subtilis TR:O31526 (EMBL:Z99107) yesW (620 aa)%2C fasta scores%3B opt: 2404 z-score: 2009.8 E(): 0%2C 57.7%25 identity in 620 aa overlap and TR:O31527 (EMBL:Z99107) yesX (612 aa)%2C fasta scores%3B opt: 1856 z-score: 1984.4 E(): 0%2C 54.4%25 identity in 599 aa overlap. Contains possible N-terminal signal sequence. Similar to TR:Q9AF09 (EMBL:AY026755) rhamnogalacturonan lyase from Pseudomonas cellulosa (881 aa) fasta scores%3B opt: 2392%2C Z-score: 2482.1%2C 59.091%25 identity (61.043%25 ungapped) in 594 aa overlap.;gbkey=CDS;gene=SC5C7.27;product=glycosyl hydrolase;protein_id=NP_630623.1;transl_table=11
NC_003888.3	RefSeq	gene	7236695	7236940	.	-	.	ID=gene6603;Dbxref=GeneID:1101982;Name=SC5C7.28c;gbkey=Gene;gene=SC5C7.28c;gene_biotype=protein_coding;gene_synonym=SC5C7.28c;locus_tag=SCO6543
NC_003888.3	RefSeq	CDS	7236695	7236940	.	-	0	ID=cds6478;Parent=gene6603;Dbxref=Genbank:NP_630624.1,GeneID:1101982;Name=NP_630624.1;Note=SC5C7.28c%2C unknown%2C len: 81 aa;gbkey=CDS;gene=SC5C7.28c;product=hypothetical protein;protein_id=NP_630624.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7236954	7236957	.	-	.	ID=id8542;Note=possible RBS upstream of SC5C7.28c;gbkey=RBS
NC_003888.3	RefSeq	gene	7237214	7237894	.	+	.	ID=gene6604;Dbxref=GeneID:1101983;Name=SC5C7.29;gbkey=Gene;gene=SC5C7.29;gene_biotype=protein_coding;gene_synonym=SC5C7.29;locus_tag=SCO6544
NC_003888.3	RefSeq	CDS	7237214	7237894	.	+	0	ID=cds6479;Parent=gene6604;Dbxref=Genbank:NP_630625.1,GeneID:1101983;Name=NP_630625.1;Note=SC5C7.29%2C possible membrane protein%2C len: 226 aa%3B contains possible transmembrane domain around aa 40;gbkey=CDS;gene=SC5C7.29;product=hypothetical protein;protein_id=NP_630625.1;transl_table=11
NC_003888.3	RefSeq	gene	7237887	7240559	.	-	.	ID=gene6605;Dbxref=GeneID:1101984;Name=SC5C7.30c;gbkey=Gene;gene=SC5C7.30c;gene_biotype=protein_coding;gene_synonym=SC5C7.30c;locus_tag=SCO6545
NC_003888.3	RefSeq	CDS	7237887	7240559	.	-	0	ID=cds6480;Parent=gene6605;Dbxref=Genbank:NP_630626.1,GeneID:1101984;Name=NP_630626.1;Note=SC5C7.30c%2C probable  cellulase%2C len: 890 aa%3B similar to TR:D1029971 (EMBL:AB015511) Aspergillus aculeatus avicelase III (856 aa)%2C fasta scores%3B opt: 2099 z-score: 1414.5 E(): 0%2C 44.5%25 identity in 845 aa overlap%2C and to many others e.g. GUNA_MICBI endoglucanase A precursor (EC 3.2.1.4) (456 aa)%2C fasta scores%3B opt: 416 z-score: 340.7 E(): 9.9e-12%2C 28.5%25 identity in 449 aa overlap (strongest in the cellulose-binding domain). Contains probable N-terminal signal sequence and Pfam match to entry PF00553 CBD_1%2C Cellulose binding domain%2C score 171.70%2C E-value 8.5e-49 at C-terminus;gbkey=CDS;gene=SC5C7.30c;product=cellulase;protein_id=NP_630626.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7237902	7238204	.	-	.	ID=id8543;Dbxref=GeneID:1101984;Note=Pfam match to entry PF00553 CBD_1%2C Cellulose binding domain%2C score 171.70%2C E-value 8.5e-49;gbkey=misc_feature;gene=SC5C7.30c
NC_003888.3	RefSeq	sequence_feature	7240490	7240493	.	+	.	ID=id8544;Note=end of true overlap with cosmid 4B5;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7240572	7240576	.	-	.	ID=id8545;Note=possible RBS upstream of SC5C7.30c;gbkey=RBS
NC_003888.3	RefSeq	gene	7240806	7243727	.	-	.	ID=gene6606;Dbxref=GeneID:1101985;Name=SC5C7.31c;gbkey=Gene;gene=SC5C7.31c;gene_biotype=protein_coding;gene_synonym=SC5C7.31c;locus_tag=SCO6546
NC_003888.3	RefSeq	CDS	7240806	7243727	.	-	0	ID=cds6481;Parent=gene6606;Dbxref=Genbank:NP_630627.1,GeneID:1101985;Name=NP_630627.1;Note=SC5C7.31c%2C probable  cellulase%2C len: 973 aa%3B N-terminus is similar to the cellulose binding domain of e.g. GUN4_THEFU endoglucanase E-4 precursor (880 aa)%2C fasta scores%3B opt: 341 z-score: 352.0 E(): 2.3e-12%2C 43.7%25 identity in 103 aa overlap. C-terminus is similar to many cellulases e.g. GUXB_CELFI exoglucanase B precursor (1090 aa)%2C fasta scores%3B opt: 2997 z-score: 2688.8 E(): 0%2C 61.4%25 identity in 699 aa overlap. Contains probable N-terminal signal sequence and Pfam match to entry PF00553 CBD_1%2C Cellulose binding domain%2C score 122.30%2C E-value 2.4e-34 near N-terminus;gbkey=CDS;gene=SC5C7.31c;product=cellulase;protein_id=NP_630627.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7243299	7243598	.	-	.	ID=id8546;Dbxref=GeneID:1101985;Note=Pfam match to entry PF00553 CBD_1%2C Cellulose binding domain%2C score 122.30%2C E-value 2.4e-34;gbkey=misc_feature;gene=SC5C7.31c
NC_003888.3	RefSeq	ribosome_entry_site	7243738	7243744	.	-	.	ID=id8547;Note=possiblke RBS upstream of SC5C7.31c;gbkey=RBS
NC_003888.3	RefSeq	gene	7244086	7244250	.	+	.	ID=gene6607;Dbxref=GeneID:1101986;Name=SC5C7.32;gbkey=Gene;gene=SC5C7.32;gene_biotype=protein_coding;gene_synonym=SC5C7.32;locus_tag=SCO6547
NC_003888.3	RefSeq	CDS	7244086	7244250	.	+	0	ID=cds6482;Parent=gene6607;Dbxref=Genbank:NP_630628.1,GeneID:1101986;Name=NP_630628.1;Note=SC5C7.32%2C questionable ORF%2C len: 54 aa;gbkey=CDS;gene=SC5C7.32;product=hypothetical protein;protein_id=NP_630628.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7244232	7244236	.	+	.	ID=id8548;Dbxref=GeneID:1101986;Note=possible RBS upstream of SC5C7.33;gbkey=RBS;gene=SC5C7.32
NC_003888.3	RefSeq	gene	7244247	7245986	.	+	.	ID=gene6608;Dbxref=GeneID:1101987;Name=SC5C7.33;gbkey=Gene;gene=SC5C7.33;gene_biotype=protein_coding;gene_synonym=SC5C7.33;locus_tag=SCO6548
NC_003888.3	RefSeq	CDS	7244247	7245986	.	+	0	ID=cds6483;Parent=gene6608;Dbxref=Genbank:NP_630629.1,GeneID:1101987;Name=NP_630629.1;Note=SC5C7.33%2C probable  cellulase%2C len: 579 aa%3B similar to many%2C e.g. TR:Q60029 (EMBL:U18978) beta-1%2C4-exocellulase precursor (596 aa)%2C fasta scores%3B opt: 2131 z-score: 2323.9 E(): 0%2C 62.1%25 identity in 585 aa overlap. Contains possible N-terminal signal sequence%2C PS00655 Glycosyl hydrolases family 6 signature 1 and Pfam match to entry PF00553 CBD_1%2C Cellulose binding domain%2C score 161.20%2C E-value 9.8e-46 near C-terminus;gbkey=CDS;gene=SC5C7.33;product=cellulase;protein_id=NP_630629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7244355	7244654	.	+	.	ID=id8549;Dbxref=GeneID:1101987;Note=Pfam match to entry PF00553 CBD_1%2C Cellulose binding domain%2C score 161.20%2C E-value 9.8e-46;gbkey=misc_feature;gene=SC5C7.33
NC_003888.3	RefSeq	sequence_feature	7244958	7245008	.	+	.	ID=id8550;Dbxref=GeneID:1101987;Note=PS00655 Glycosyl hydrolases family 6 signature 1;gbkey=misc_feature;gene=SC5C7.33
NC_003888.3	RefSeq	ribosome_entry_site	7246133	7246137	.	+	.	ID=id8551;Note=possible RBS upstream of SC5C7.34;gbkey=RBS
NC_003888.3	RefSeq	gene	7246146	7247090	.	+	.	ID=gene6609;Dbxref=GeneID:1101988;Name=SC5C7.34;gbkey=Gene;gene=SC5C7.34;gene_biotype=protein_coding;gene_synonym=SC5C7.34;locus_tag=SCO6549
NC_003888.3	RefSeq	CDS	7246146	7247090	.	+	0	ID=cds6484;Parent=gene6609;Dbxref=Genbank:NP_630630.1,GeneID:1101988;Name=NP_630630.1;Note=SC5C7.34%2C unknow%2C len: 314 aa%3B highly His-rich in N-terminus;gbkey=CDS;gene=SC5C7.34;product=hypothetical protein;protein_id=NP_630630.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7247165	7247170	.	+	.	ID=id8552;Note=possible RBS upstream of SC5C7.35;gbkey=RBS
NC_003888.3	RefSeq	gene	7247175	7247876	.	+	.	ID=gene6610;Dbxref=GeneID:1101989;Name=SC5C7.35;gbkey=Gene;gene=SC5C7.35;gene_biotype=protein_coding;gene_synonym=SC5C7.35;locus_tag=SCO6550
NC_003888.3	RefSeq	CDS	7247175	7247876	.	+	0	ID=cds6485;Parent=gene6610;Dbxref=Genbank:NP_630631.1,GeneID:1101989;Name=NP_630631.1;Note=SC5C7.35%2C probable oxidoreductase%2C len: 233 aa%3B similar to many e.g. TR:O54197 (EMBL:AJ000671) Streptomyces clavuligerus clavulanate-9-aldehyde reducatase (247 aa)%2C fasta scores%3B opt: 340 z-score: 414.7 E(): 7.5e-16%2C 34.0%25 identity in 238 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C Alcohol /other dehydrogenases%2C short chain type%2C score 129.10%2C E-value 8e-35;gbkey=CDS;gene=SC5C7.35;product=oxidoreductase;protein_id=NP_630631.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7247187	7247732	.	+	.	ID=id8553;Dbxref=GeneID:1101989;Note=Pfam match to entry PF00106 adh_short%2C Alcohol /other dehydrogenases%2C short chain type%2C score 129.10%2C E-value 8e-35;gbkey=misc_feature;gene=SC5C7.35
NC_003888.3	RefSeq	stem_loop	7247878	7247925	.	+	.	ID=id8554;Note=hairpin loop with 23 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	sequence_feature	7247882	7247993	.	+	.	ID=id8555;Note=Overlap with Streptomyces coelicolor cosmid 5C7 (EMBL:AL031515).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7247934	7248767	.	-	.	ID=gene6611;Dbxref=GeneID:1101990;Name=SC4B5.01c;gbkey=Gene;gene=SC4B5.01c;gene_biotype=protein_coding;gene_synonym=SC4B5.01c;locus_tag=SCO6551
NC_003888.3	RefSeq	CDS	7247934	7248767	.	-	0	ID=cds6486;Parent=gene6611;Dbxref=Genbank:NP_630632.1,GeneID:1101990;Name=NP_630632.1;Note=SC4B5.01c%2C probable oxidoreductase%2C len%3B 277aa%2C similar to many eg. TR:P06632 (EMBL:M12799) 2%2C5-diketo-D-gluconic acid (2%2C5-DKG) reductase from Corynebacterium sp. (278 aa)%2C fasta scores%3B opt: 938%2C z-score: 1372.7%2C E(): 0%2C (52.9%25 identity in 276 aa overlap). Contains PS00063 Aldo /keto reductase family active site signature%2C PS00062 Aldo /keto reductase family signature 2 and Pfam match to entry PF00248 aldo_ket_red%2C Aldo /keto reductase family%2C score 464.50%2C E-value 3.6e-136.;gbkey=CDS;gene=SC4B5.01c;product=oxidoreductase;protein_id=NP_630632.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7247967	7248740	.	-	.	ID=id8556;Dbxref=GeneID:1101990;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo /keto reductase family%2C score 464.50%2C E-value 3.6e-136;gbkey=misc_feature;gene=SC4B5.01c
NC_003888.3	RefSeq	sequence_feature	7248030	7248077	.	-	.	ID=id8557;Dbxref=GeneID:1101990;Note=PS00063 Aldo /keto reductase family active site signature.;gbkey=misc_feature;gene=SC4B5.01c
NC_003888.3	RefSeq	sequence_feature	7248339	7248392	.	-	.	ID=id8558;Dbxref=GeneID:1101990;Note=PS00062 Aldo /keto reductase family signature 2.;gbkey=misc_feature;gene=SC4B5.01c
NC_003888.3	RefSeq	gene	7248851	7250677	.	-	.	ID=gene6612;Dbxref=GeneID:1101991;Name=SC4B5.02c;gbkey=Gene;gene=SC4B5.02c;gene_biotype=protein_coding;gene_synonym=SC4B5.02c;locus_tag=SCO6552
NC_003888.3	RefSeq	CDS	7248851	7250677	.	-	0	ID=cds6487;Parent=gene6612;Dbxref=Genbank:NP_630633.1,GeneID:1101991;Name=NP_630633.1;Note=SC4B5.02c%2C probable long-chain-fatty-acid-CoA ligase%2C len: 608aa%2C similar to many eg. TR:O53521 (EMBL:AL021957)  long-chain-fatty-acid-CoA ligase from Mycobacterium tuberculosis (600 aa)%2C fasta scores%3B opt: 1177%2C z-score: 1838.1%2C E(): 0%2C (44.8%25 identity in 612 aa overlap). Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score -73.00%2C E-value 7.8e-11 and PS00455  AMP-binding domain signature.;gbkey=CDS;gene=SC4B5.02c;product=long-chain-fatty-acid-CoA ligase;protein_id=NP_630633.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7249169	7250521	.	-	.	ID=id8559;Dbxref=GeneID:1101991;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score -73.00%2C E-value 7.8e-11;gbkey=misc_feature;gene=SC4B5.02c
NC_003888.3	RefSeq	sequence_feature	7250092	7250127	.	-	.	ID=id8560;Dbxref=GeneID:1101991;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=SC4B5.02c
NC_003888.3	RefSeq	gene	7250906	7252420	.	-	.	ID=gene6613;Dbxref=GeneID:1101992;Name=SC4B5.03c;gbkey=Gene;gene=SC4B5.03c;gene_biotype=protein_coding;gene_synonym=SC4B5.03c;locus_tag=SCO6553
NC_003888.3	RefSeq	CDS	7250906	7252420	.	-	0	ID=cds6488;Parent=gene6613;Dbxref=Genbank:NP_630634.1,GeneID:1101992;Name=NP_630634.1;Note=SC4B5.03c%2C probable integral membrane efflux protein%2C len: 504aa%3B similar to a family of integral membrane transport proteins most of which appear to be concerned with export of antimicrobial compounds%2C most similar to SW:TCMA_STRGA tetracenomycin C resistance and export protein from Streptomyces glaucescens (538 aa)%2C fasta scores%3B opt: 790%2C z-score: 800.0%2C E(): 0%2C (33.8%25 identity in 497 aa overlap). Contains PS00216 Sugar transport proteins signature 1. Also contains several membrane spanning regions.;gbkey=CDS;gene=SC4B5.03c;product=integral membrane efflux protein;protein_id=NP_630634.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7252193	7252243	.	-	.	ID=id8561;Dbxref=GeneID:1101992;Note=PS00216 Sugar transport proteins signature 1.;gbkey=misc_feature;gene=SC4B5.03c
NC_003888.3	RefSeq	gene	7252536	7253519	.	+	.	ID=gene6614;Dbxref=GeneID:1101993;Name=SC4B5.04;gbkey=Gene;gene=SC4B5.04;gene_biotype=protein_coding;gene_synonym=SC4B5.04;locus_tag=SCO6554
NC_003888.3	RefSeq	CDS	7252536	7253519	.	+	0	ID=cds6489;Parent=gene6614;Dbxref=Genbank:NP_630635.1,GeneID:1101993;Name=NP_630635.1;Note=SC4B5.04%2C probable transcriptional regulatory protein%2C len: 327 aa%3B C-terminal region weakly similar to several members of the asnC family of transcriptional regulators e.g. SW:Y723_METJA  transcriptional regulatory protein from Methanococcus jannaschii (156 aa)%2C fasta scores%3B opt: 167%2C z-score: 267.8%2C E(): 1.3e-07%2C (24.1%25 identity in 141 aa overlap). Contains probable helix-turn-helix motif (score 1226%2C +3.36 SD) from residue 198 to 219.;gbkey=CDS;gene=SC4B5.04;product=transcriptional regulator;protein_id=NP_630635.1;transl_table=11
NC_003888.3	RefSeq	gene	7253501	7254379	.	-	.	ID=gene6615;Dbxref=GeneID:1101994;Name=SC4B5.05c;gbkey=Gene;gene=SC4B5.05c;gene_biotype=protein_coding;gene_synonym=SC4B5.05c;locus_tag=SCO6555
NC_003888.3	RefSeq	CDS	7253501	7254379	.	-	0	ID=cds6490;Parent=gene6615;Dbxref=Genbank:NP_630636.1,GeneID:1101994;Name=NP_630636.1;Note=SC4B5.05c%2C LysR-family transcriptional regulator%2C len: 295 aa%3B similar to several members of the LysR family of transcriptional regulators eg. TR:G3273739 (EMBL:AF057064) HexA from Erwinia carotovora subspecies atroseptica (316 aa)%2C fasta scores%3B opt: 453%2C z-score: 562.2%2C E(): 5.1e-24%2C (32.6%25 identity in 276 aa overlap). Contains PS00044 Bacterial regulatory proteins%2C lysR family signature%2C PS00287 Cysteine proteases inhibitors signature and Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix proteins%2C lysR family%2C score 143.70%2C E-value 3.3e-39. Contains strong helix-turn-helix motif (score 2054%2C +6.18 SD) at residue18 10 39.;gbkey=CDS;gene=SC4B5.05c;product=LysR family transcriptional regulator;protein_id=NP_630636.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7253948	7254370	.	-	.	ID=id8562;Dbxref=GeneID:1101994;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix proteins%2C lysR family%2C score 143.70%2C E-value 3.3e-39;gbkey=misc_feature;gene=SC4B5.05c
NC_003888.3	RefSeq	sequence_feature	7254236	7254328	.	-	.	ID=id8563;Dbxref=GeneID:1101994;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=SC4B5.05c
NC_003888.3	RefSeq	gene	7254532	7255569	.	+	.	ID=gene6616;Dbxref=GeneID:1101995;Name=SC4B5.06;gbkey=Gene;gene=SC4B5.06;gene_biotype=protein_coding;gene_synonym=SC4B5.06;locus_tag=SCO6556
NC_003888.3	RefSeq	CDS	7254532	7255569	.	+	0	ID=cds6491;Parent=gene6616;Dbxref=Genbank:NP_630637.1,GeneID:1101995;Name=NP_630637.1;Note=SC4B5.06%2C possible transmembrane protein%2C similar to SW:YFEH_ECOLI Hypothetical protein from Escherichia coli%2C (332 aa)%2C fasta scores%3B opt: 985%2C z-score: 1173.2%2C E(): 0%2C (48.9%25 identity in 323 aa overlap). Hydrophobic with several possible membrane spanning regions.;gbkey=CDS;gene=SC4B5.06;product=transmembrane protein;protein_id=NP_630637.1;transl_table=11
NC_003888.3	RefSeq	gene	7255596	7257542	.	-	.	ID=gene6617;Dbxref=GeneID:1101996;Name=SC4B5.07c;gbkey=Gene;gene=SC4B5.07c;gene_biotype=protein_coding;gene_synonym=SC4B5.07c;locus_tag=SCO6557
NC_003888.3	RefSeq	CDS	7255596	7257542	.	-	0	ID=cds6492;Parent=gene6617;Dbxref=Genbank:NP_630638.1,GeneID:1101996;Name=NP_630638.1;Note=SC4B5.07c%2C possible neuraminidase (hypothetical protein)%2C len: 648 aa%3B similar to several e.g. TR:D1001316 (EMBL:D01045) neuraminidase from Micromonospora viridifaciens (647 aa) fasta scores%3B opt: 286%2C z-score: 289.0%2C E(): 8.4e-09%2C (30.4%25 identity in 598 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4B5.07c;product=neuramidase;protein_id=NP_630638.1;transl_table=11
NC_003888.3	RefSeq	gene	7257738	7258586	.	-	.	ID=gene6618;Dbxref=GeneID:1101997;Name=SC4B5.08c;gbkey=Gene;gene=SC4B5.08c;gene_biotype=protein_coding;gene_synonym=SC4B5.08c;locus_tag=SCO6558
NC_003888.3	RefSeq	CDS	7257738	7258586	.	-	0	ID=cds6493;Parent=gene6618;Dbxref=Genbank:NP_630639.1,GeneID:1101997;Name=NP_630639.1;Note=involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth;gbkey=CDS;gene=SC4B5.08c;product=formate dehydrogenase accessory protein;protein_id=NP_630639.1;transl_table=11
NC_003888.3	RefSeq	gene	7258619	7259479	.	-	.	ID=gene6619;Dbxref=GeneID:1101998;Name=SC4B5.09c;gbkey=Gene;gene=SC4B5.09c;gene_biotype=protein_coding;gene_synonym=SC4B5.09c;locus_tag=SCO6559
NC_003888.3	RefSeq	CDS	7258619	7259479	.	-	0	ID=cds6494;Parent=gene6619;Dbxref=Genbank:NP_630640.1,GeneID:1101998;Name=NP_630640.1;Note=SC4B5.09c%2C respiratory chain oxidoreductase%2C len: 286 aa%3B similar to the N-terminal region of many proteins involved in electron transfer e.g. TR:P77908 (EMBL:U73807) FdhA formate dehydrogenase alpha subunit from Moorella thermoacetica (893 aa)%2C fasta scores%3B opt: 685%2C z-score: 791.8%2C E(): 0%2C (38.4%25 identity in 284 aa overlap). Contains PS00551 Prokaryotic molybdopterin oxidoreductases signature 1%2C PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature%2C PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature%2C Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains%2C score 40.00%2C E-value 2.4e-10 and Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score -5.70%2C E-value 0.11. Considering the corresponding homologies%2C this CDS may have previously been located directly upsteam of SC4B5.11c;gbkey=CDS;gene=SC4B5.09c;product=respiratory chain oxidoreductase;protein_id=NP_630640.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7258721	7258777	.	-	.	ID=id8564;Dbxref=GeneID:1101998;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;gbkey=misc_feature;gene=SC4B5.09c
NC_003888.3	RefSeq	sequence_feature	7258838	7259047	.	-	.	ID=id8565;Dbxref=GeneID:1101998;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains.%2C score 40.00%2C E-value 2.4e-10;gbkey=misc_feature;gene=SC4B5.09c
NC_003888.3	RefSeq	sequence_feature	7258859	7258894	.	-	.	ID=id8566;Dbxref=GeneID:1101998;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=SC4B5.09c
NC_003888.3	RefSeq	sequence_feature	7258991	7259026	.	-	.	ID=id8567;Dbxref=GeneID:1101998;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=SC4B5.09c
NC_003888.3	RefSeq	sequence_feature	7259228	7259446	.	-	.	ID=id8568;Dbxref=GeneID:1101998;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score -5.70%2C E-value 0.11;gbkey=misc_feature;gene=SC4B5.09c
NC_003888.3	RefSeq	gene	7259476	7261416	.	-	.	ID=gene6620;Dbxref=GeneID:1101999;Name=SC4B5.10c;gbkey=Gene;gene=SC4B5.10c;gene_biotype=protein_coding;gene_synonym=SC4B5.10c;locus_tag=SCO6560
NC_003888.3	RefSeq	CDS	7259476	7261416	.	-	0	ID=cds6495;Parent=gene6620;Dbxref=Genbank:NP_630641.1,GeneID:1101999;Name=NP_630641.1;Note=SC4B5.10c%2C respiratory chain oxidoreductase%2C len: 646 aa%3B C-terminal region is similar to the N-terminal region of many proteins involved in electron transfer e.g. TR:O27592 (EMBL:AE000915) NADP-reducing hydrogenase%2C subunit C from Methanobacterium thermoautotrophicum (630 aa)%2C fasta scores%3B opt: 121%2C4 z-score: 1170.7%2C E(): 0%2C (47.1%25 identity in 397 aa overlap). Contains PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2.;gbkey=CDS;gene=SC4B5.10c;product=respiratory chain oxidoreductase;protein_id=NP_630641.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7259659	7259694	.	-	.	ID=id8569;Dbxref=GeneID:1101999;Note=PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2.;gbkey=misc_feature;gene=SC4B5.10c
NC_003888.3	RefSeq	gene	7261448	7263376	.	-	.	ID=gene6621;Dbxref=GeneID:1102000;Name=SC4B5.11c;gbkey=Gene;gene=SC4B5.11c;gene_biotype=protein_coding;gene_synonym=SC4B5.11c;locus_tag=SCO6561
NC_003888.3	RefSeq	CDS	7261448	7263376	.	-	0	ID=cds6496;Parent=gene6621;Dbxref=Genbank:NP_630642.1,GeneID:1102000;Name=NP_630642.1;Note=SC4B5.11c%2C respiratory chain oxidoreductase%2C len: 642 aa%3B similar to the C-terminal region of many proteins involved in electron transfer e.g. TR:P77908 (EMBL:U73807) FdhA formate dehydrogenase alpha subunit from Moorella thermoacetica (893 aa) fasta scores%3B opt: 1532%2C z-score: 1338.5%2C E(): 0%2C (43.1%25 identity in 619 aa overlap). Contains Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 95.80%2C E-value 6.2e-30. Considering the corresponding homolgies%2C this CDS may have previously been located directly downsteam of SC4B5.09c.;gbkey=CDS;gene=SC4B5.11c;product=respiratory chain oxidoreductase;protein_id=NP_630642.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7262081	7262272	.	-	.	ID=id8570;Dbxref=GeneID:1102000;Note=Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 95.80%2C E-value 6.2e-30;gbkey=misc_feature;gene=SC4B5.11c
NC_003888.3	RefSeq	gene	7263373	7264344	.	-	.	ID=gene6622;Dbxref=GeneID:1102001;Name=SC4B5.12c;gbkey=Gene;gene=SC4B5.12c;gene_biotype=protein_coding;gene_synonym=SC4B5.12c;locus_tag=SCO6562
NC_003888.3	RefSeq	CDS	7263373	7264344	.	-	0	ID=cds6497;Parent=gene6622;Dbxref=Genbank:NP_630643.1,GeneID:1102001;Name=NP_630643.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;gene=SC4B5.12c;product=2-dehydropantoate 2-reductase;protein_id=NP_630643.1;transl_table=11
NC_003888.3	RefSeq	gene	7264548	7265888	.	+	.	ID=gene6623;Dbxref=GeneID:1102002;Name=SC4B5.13;gbkey=Gene;gene=SC4B5.13;gene_biotype=protein_coding;gene_synonym=SC4B5.13;locus_tag=SCO6563
NC_003888.3	RefSeq	CDS	7264548	7265888	.	+	0	ID=cds6498;Parent=gene6623;Dbxref=Genbank:NP_630644.1,GeneID:1102002;Name=NP_630644.1;Note=SC4B5.13%2C probable integral membrane transporter%2C len: 446aa%3B similar to several eg. TR:Q51330 (EMBL:U40075) OxlT%2C the oxalate:formate exchange protein from Oxalobacter formigenes (418 aa)%2C fasta scores%3B opt: 243%2C z-score: 382.3%2C E(): 5.3e-14%2C (26.1%25 identity in 421 aa overlap). Contains several possible membrane spanning regions. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -99.90%2C E-value 0.013.;gbkey=CDS;gene=SC4B5.13;product=integral membrane transporter;protein_id=NP_630644.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7264587	7265834	.	+	.	ID=id8571;Dbxref=GeneID:1102002;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -99.90%2C E-value 0.013;gbkey=misc_feature;gene=SC4B5.13
NC_003888.3	RefSeq	gene	7266172	7267122	.	+	.	ID=gene6624;Dbxref=GeneID:1102003;Name=fabH2;gbkey=Gene;gene=fabH2;gene_biotype=protein_coding;gene_synonym=fabH2,SC4B5.14;locus_tag=SCO6564
NC_003888.3	RefSeq	CDS	7266172	7267122	.	+	0	ID=cds6499;Parent=gene6624;Dbxref=Genbank:NP_630645.1,GeneID:1102003;Name=NP_630645.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;gene=fabH2;product=3-oxoacyl-ACP synthase III;protein_id=NP_630645.1;transl_table=11
NC_003888.3	RefSeq	gene	7267256	7267933	.	+	.	ID=gene6625;Dbxref=GeneID:1102004;Name=SC4B5.15;gbkey=Gene;gene=SC4B5.15;gene_biotype=protein_coding;gene_synonym=SC4B5.15;locus_tag=SCO6565
NC_003888.3	RefSeq	CDS	7267256	7267933	.	+	0	ID=cds6500;Parent=gene6625;Dbxref=Genbank:NP_630646.1,GeneID:1102004;Name=NP_630646.1;Note=SC4B5.15%2C probable transcriptional regulator%2C len: 225aa%3B similar to many hypothetical /transcriptional regulators e.g. TR:O50514 (EMBL:AL009204) probable transcriptional regulator from Streptomyces coelicolor (231 aa)%2C fasta scores%3B opt: 322%2C z-score: 457.0%2C E(): 3.7e-18%2C (35.2%25 identity in 199 aa overlap) and TR:P77347 (EMBL:D90785) NTA operon transcriptional regulator from Escherichia coli (221 aa)%2C fasta scores%3B opt: 233%2C z-score: 348.7%2C E(): 4e-12%2C (27.1%25 identity in 192 aa overlap). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 56.90%2C E-value 5e-16.;gbkey=CDS;gene=SC4B5.15;product=transcriptional regulator;protein_id=NP_630646.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7267325	7267501	.	+	.	ID=id8572;Dbxref=GeneID:1102004;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 56.90%2C E-value 5e-16;gbkey=misc_feature;gene=SC4B5.15
NC_003888.3	RefSeq	gene	7267996	7269378	.	+	.	ID=gene6626;Dbxref=GeneID:1102005;Name=SC3F9.01;gbkey=Gene;gene=SC3F9.01;gene_biotype=protein_coding;gene_synonym=SC3F9.01,SC4B5.16;locus_tag=SCO6566
NC_003888.3	RefSeq	CDS	7267996	7269378	.	+	0	ID=cds6501;Parent=gene6626;Dbxref=Genbank:NP_733706.1,GeneID:1102005;Name=NP_733706.1;Note=SC3F9.01%2C unknown%2C partial CDS%2C len: >403 aa%3B similar to many members of the ROK (nagC/xylR) family e.g. NAGC_ECOLI N-acetylglucosamine repressor (406 aa)%2C fasta scores%3B opt: 513 z-score: 578.8 E(): 5e-25%2C 28.6%25 identity in 388 aa overlap and GLK_STRCO glucokinase (EC 2.7.1.2) (glucose kinase) (317 aa)%2C fasta scores%3B opt: 544 z-score: 570.9 E(): 1.4e-24%2C 34.4%25 identity in 317 aa overlap. Contains PS01125 ROK family signature and Pfam match to entry ROK PF00480%2C ROK family%2C score 164.11. Also similar to S. coelicolor SC7B7.05%2C probable transcriptional repressor (E(): 9.6e-25%2C 34.3%25 identity in 385 aa overlap)~SC4B5.16%2C possible ROK family protein%2C partial CDS%2C len: 92aa%3B forms the C-terminal region of TR:O69941 (EMBL:AL023862) partial CDS%2C hypothetical ROK family protein on adjacent cosmid 3F9 from Streptomyces coelicolor (403 aa).;gbkey=CDS;gene=SC3F9.01;product=ROK family protein;protein_id=NP_733706.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7268167	7279289	.	-	.	ID=id8573;Note=real overlap with cosmid 4B5%3B unfinished;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7268167	7268273	.	+	.	ID=id8574;Dbxref=GeneID:1102005;Note=Overlap with Streptomyces coelicolor cosmid 3F9 (EMBL:AL023862).;gbkey=misc_feature;gene=SC3F9.01
NC_003888.3	RefSeq	sequence_feature	7268431	7268985	.	+	.	ID=id8575;Dbxref=GeneID:1102005;Note=Pfam match to entry ROK PF00480%2C ROK family%2C score 164.11;gbkey=misc_feature;gene=SC3F9.01
NC_003888.3	RefSeq	sequence_feature	7268821	7268904	.	+	.	ID=id8576;Dbxref=GeneID:1102005;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SC3F9.01
NC_003888.3	RefSeq	ribosome_entry_site	7269576	7269579	.	+	.	ID=id8577;Note=possible RBS upstream of SC3F9.02;gbkey=RBS
NC_003888.3	RefSeq	gene	7269589	7271106	.	+	.	ID=gene6627;Dbxref=GeneID:1102006;Name=SC3F9.02;gbkey=Gene;gene=SC3F9.02;gene_biotype=protein_coding;gene_synonym=SC3F9.02;locus_tag=SCO6567
NC_003888.3	RefSeq	CDS	7269589	7271106	.	+	0	ID=cds6502;Parent=gene6627;Dbxref=Genbank:NP_630647.1,GeneID:1102006;Name=NP_630647.1;Note=SC3F9.02%2C ABC transporter ATP binding protein%2C len:505 aa%3B similar to many sugar transport proteins e.g. ARAG_ECOLI l-arabinose transport atp-binding protein (504 aa)%2C fasta scores%3B opt: 1312 z-score: 1412.8 E(): 0%2C 42.1%25 identity in 501 aa overlap andRBSA_HAEIN ribose transport atp-binding protein rbsA (493 aa)%2C fasta scores%3B opt: 1160 z-score: 1216.7 E(): 0%2C 40.7%25 identity in 489 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop)%2C PS00211 ABC transporters family signature and Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C score 197.70;gbkey=CDS;gene=SC3F9.02;product=ABC transporter ATP-binding protein;protein_id=NP_630647.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7269685	7270251	.	+	.	ID=id8578;Dbxref=GeneID:1102006;Note=Pfam match to entry ABC_tran PF00005%2C ABC transporters%2C score 197.70;gbkey=misc_feature;gene=SC3F9.02
NC_003888.3	RefSeq	sequence_feature	7269706	7269729	.	+	.	ID=id8579;Dbxref=GeneID:1102006;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3F9.02
NC_003888.3	RefSeq	sequence_feature	7270795	7270839	.	+	.	ID=id8580;Dbxref=GeneID:1102006;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC3F9.02
NC_003888.3	RefSeq	ribosome_entry_site	7271087	7271091	.	+	.	ID=id8581;Dbxref=GeneID:1102006;Note=possible RBS upstream of SC3F9.03;gbkey=RBS;gene=SC3F9.02
NC_003888.3	RefSeq	gene	7271103	7272122	.	+	.	ID=gene6628;Dbxref=GeneID:1102007;Name=SC3F9.03;gbkey=Gene;gene=SC3F9.03;gene_biotype=protein_coding;gene_synonym=SC3F9.03;locus_tag=SCO6568
NC_003888.3	RefSeq	CDS	7271103	7272122	.	+	0	ID=cds6503;Parent=gene6628;Dbxref=Genbank:NP_630648.1,GeneID:1102007;Name=NP_630648.1;Note=SC3F9.03%2C ABC transporter integral membrane protein%2C len: 339 aa%3B similar to many involved in sugar transport e.g. RBSC_BACSU ribose transport system permease (323 aa)%2C fasta scores%3B opt: 700 z-score: 958.9 E(): 0%2C 39.5%25identity in 314 aa overlap;gbkey=CDS;gene=SC3F9.03;product=ABC transporter;protein_id=NP_630648.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7272122	7272125	.	+	.	ID=id8582;Note=possible RBS upstream of SC3F9.04;gbkey=RBS
NC_003888.3	RefSeq	gene	7272140	7273186	.	+	.	ID=gene6629;Dbxref=GeneID:1102008;Name=SC3F9.04;gbkey=Gene;gene=SC3F9.04;gene_biotype=protein_coding;gene_synonym=SC3F9.04;locus_tag=SCO6569
NC_003888.3	RefSeq	CDS	7272140	7273186	.	+	0	ID=cds6504;Parent=gene6629;Dbxref=Genbank:NP_630649.1,GeneID:1102008;Name=NP_630649.1;Note=SC3F9.04%2C probable  solute binding protein%2C len: 348 aa%3B similar to many e.g. RBSB_HAEIN D-ribose-binding periplasmic protein precursor (292 aa)%2C fasta scores%3B opt: 341 z-score: 284.7 E(): 1.2e-08%2C 29.2%25 identity in 271 aa overlap. Contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC3F9.04;product=solute binding protein;protein_id=NP_630649.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7272185	7272217	.	+	.	ID=id8583;Dbxref=GeneID:1102008;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC3F9.04
NC_003888.3	RefSeq	ribosome_entry_site	7273258	7273263	.	+	.	ID=id8584;Note=possible RBS upstream of SCF9.05;gbkey=RBS
NC_003888.3	RefSeq	gene	7273272	7274564	.	+	.	ID=gene6630;Dbxref=GeneID:1102009;Name=SC3F9.05;gbkey=Gene;gene=SC3F9.05;gene_biotype=protein_coding;gene_synonym=SC3F9.05;locus_tag=SCO6570
NC_003888.3	RefSeq	CDS	7273272	7274564	.	+	0	ID=cds6505;Parent=gene6630;Dbxref=Genbank:NP_630650.1,GeneID:1102009;Name=NP_630650.1;Note=SC3F9.05%2C possible oxidoreductase%2C len: 430 aa%3B similar to e.g. Zymomonas mobilisTR:P75002 (EMBL:Z80356) glucose-fructose oxidoreductase (433 aa)%2C fasta scores%3B opt: 310 z-score: 305.5 E(): 8.4e-10%2C 27.2%25 identity in 426 aa overlap;gbkey=CDS;gene=SC3F9.05;product=oxidoreductase;protein_id=NP_630650.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7274564	7274569	.	+	.	ID=id8585;Note=possible RBS upstream of SC3F9.06;gbkey=RBS
NC_003888.3	RefSeq	gene	7274581	7275579	.	+	.	ID=gene6631;Dbxref=GeneID:1102010;Name=SC3F9.06;gbkey=Gene;gene=SC3F9.06;gene_biotype=protein_coding;gene_synonym=SC3F9.06;locus_tag=SCO6571
NC_003888.3	RefSeq	CDS	7274581	7275579	.	+	0	ID=cds6506;Parent=gene6631;Dbxref=Genbank:NP_630651.1,GeneID:1102010;Name=NP_630651.1;Note=SC3F9.06%2C possible DNA-binding protein%2C len: 332 aa%3B similar to TR:Q9A7T9 (EMBL:AE005838) Caulobacter crescentus hypothetical protein CC1631%2C 351 aa%3B fasta scores: opt: 552 Z-score: 641.5 E(): 4.2e-28%3B 34.940%25 identity in 332 aa overlap. Contains possible helix-turn-helix motif at residues 55 to 76 (Score 1148%2C +3.10 SD);gbkey=CDS;gene=SC3F9.06;product=DNA-binding protein;protein_id=NP_630651.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7275856	7275860	.	+	.	ID=id8586;Note=possible RBS upstream of SC3F9.07;gbkey=RBS
NC_003888.3	RefSeq	gene	7275867	7279583	.	+	.	ID=gene6632;Dbxref=GeneID:1102011;Name=SC3F9.07;gbkey=Gene;gene=SC3F9.07;gene_biotype=protein_coding;gene_synonym=SC3F9.07;locus_tag=SCO6572
NC_003888.3	RefSeq	CDS	7275867	7279583	.	+	0	ID=cds6507;Parent=gene6632;Dbxref=Genbank:NP_630652.1,GeneID:1102011;Name=NP_630652.1;Note=SC3F9.07%2C possible glycosyl hydrolase (hypothetical protein)%2C len: 1238 aa%3B similar to TR:Q9K473 (EMBL:AL359215)  glycosyl hydrolase from Streptomyces coelicolor (962 aa) fasta scores%3B opt: 3614%2C Z-score: 3774.0%2C 63.899%25 identity (65.074%25 ungapped) in 831 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC3F9.07;product=glycosyl hydrolase;protein_id=NP_630652.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7279740	7279746	.	+	.	ID=id8587;Note=possible RBS upstream of SC3F9.08;gbkey=RBS
NC_003888.3	RefSeq	gene	7279753	7281006	.	+	.	ID=gene6633;Dbxref=GeneID:1102012;Name=SC3F9.08;gbkey=Gene;gene=SC3F9.08;gene_biotype=protein_coding;gene_synonym=SC3F9.08;locus_tag=SCO6573
NC_003888.3	RefSeq	CDS	7279753	7281006	.	+	0	ID=cds6508;Parent=gene6633;Dbxref=Genbank:NP_630653.1,GeneID:1102012;Name=NP_630653.1;Note=SC3F9.08%2C probable hypothetical protein%2C len: 417 aa%3B some similarity to many eukaryotic myo-inositol-1-phosphate synthases e.g. INO1_SPIPO (510 aa)%2C fasta scores%3B opt: 159 z-score: 190.1 E(): 0.0022%2C 28.1%25 identity in 423 aa overlap%2C and to Archaeoglobus fulgidus TR:O28480 (EMBL:AE000979) AF1794 (392 aa)%2C fasta scores%3B opt: 546 z-score: 713.5 E(): 1.6e-32%2C 37.0%25 identity in 397 aa overlap. Contains possible N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SC3F9.08;product=hypothetical protein;protein_id=NP_630653.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7279819	7279851	.	+	.	ID=id8588;Dbxref=GeneID:1102012;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC3F9.08
NC_003888.3	RefSeq	gene	7281003	7282094	.	+	.	ID=gene6634;Dbxref=GeneID:1102013;Name=SC3F9.09;gbkey=Gene;gene=SC3F9.09;gene_biotype=protein_coding;gene_synonym=SC3F9.09;locus_tag=SCO6574
NC_003888.3	RefSeq	CDS	7281003	7282094	.	+	0	ID=cds6509;Parent=gene6634;Dbxref=Genbank:NP_630654.1,GeneID:1102013;Name=NP_630654.1;Note=SC3F9.09%2C membrane protein%2C len: 363 aa%3B similar to TR:Q9Z4Y9 (EMBL:AL035707) Streptomyces coelicolor transferase SCE29.11c%2C 291 aa%3B fasta scores: opt: 666 Z-score: 604.6 E(): 4.8e-26%3B 51.282%25 identity in 312 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC3F9.09;product=hypothetical protein;protein_id=NP_630654.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7282078	7282081	.	+	.	ID=id8589;Dbxref=GeneID:1102013;Note=possible RBS upstream of SC3F9.10;gbkey=RBS;gene=SC3F9.09
NC_003888.3	RefSeq	gene	7282091	7283038	.	+	.	ID=gene6635;Dbxref=GeneID:1102014;Name=SC3F9.10;gbkey=Gene;gene=SC3F9.10;gene_biotype=protein_coding;gene_synonym=SC3F9.10;locus_tag=SCO6575
NC_003888.3	RefSeq	CDS	7282091	7283038	.	+	0	ID=cds6510;Parent=gene6635;Dbxref=Genbank:NP_630655.1,GeneID:1102014;Name=NP_630655.1;Note=SC3F9.10%2C unknown%2C len: 315 aa%3B some similarity to MOCC_RHIME rhizopine catabolism protein MocC (325 aa)%2C fasta scores%3B opt: 127 z-score: 216.9 E(): 7.2e-05%2C 33.5%25 identity in 167 aa overlap;gbkey=CDS;gene=SC3F9.10;product=hypothetical protein;protein_id=NP_630655.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7283041	7283044	.	+	.	ID=id8590;Note=possible RBS upstream of SC3F9.11;gbkey=RBS
NC_003888.3	RefSeq	gene	7283052	7283789	.	+	.	ID=gene6636;Dbxref=GeneID:1102015;Name=SC3F9.11;gbkey=Gene;gene=SC3F9.11;gene_biotype=protein_coding;gene_synonym=SC3F9.11;locus_tag=SCO6576
NC_003888.3	RefSeq	CDS	7283052	7283789	.	+	0	ID=cds6511;Parent=gene6636;Dbxref=Genbank:NP_630656.1,GeneID:1102015;Name=NP_630656.1;Note=SC3F9.11%2C unknown%2C len: 245 aa%3B sim ilar to another from Streptomyces coelicolor TR:Q9Z4Z1 (EMBL:AL035707) SCE29.09C (236 aa) fasta scores%3B opt: 416%2C Z-score: 467.6%2C E(): 2.1e-18%2C 45.455%25 identity (52.083%25 ungapped) in 220 aa overlap .;gbkey=CDS;gene=SC3F9.11;product=hypothetical protein;protein_id=NP_630656.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7283778	7283783	.	+	.	ID=id8591;Dbxref=GeneID:1102015;Note=possible RBS upstream of SC3F9.12;gbkey=RBS;gene=SC3F9.11
NC_003888.3	RefSeq	gene	7283789	7284637	.	+	.	ID=gene6637;Dbxref=GeneID:1102016;Name=SC3F9.12;gbkey=Gene;gene=SC3F9.12;gene_biotype=protein_coding;gene_synonym=SC3F9.12;locus_tag=SCO6577
NC_003888.3	RefSeq	CDS	7283789	7284637	.	+	0	ID=cds6512;Parent=gene6637;Dbxref=Genbank:NP_630657.1,GeneID:1102016;Name=NP_630657.1;Note=SC3F9.12%2C unknown%2C len: 282 aa%3B similar to hypothetical proteins from several organisms e.g. YD83_METJA MJ1383(256 aa)%2C fasta scores%3B opt: 347 z-score: 391.9 E(): 1.3e-14%2C 28.5%25 identity in 260 aa overlap;gbkey=CDS;gene=SC3F9.12;product=hypothetical protein;protein_id=NP_630657.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7284631	7284634	.	+	.	ID=id8592;Dbxref=GeneID:1102016;Note=possible RBS upstream of SC3F9.13;gbkey=RBS;gene=SC3F9.12
NC_003888.3	RefSeq	gene	7284641	7285816	.	+	.	ID=gene6638;Dbxref=GeneID:1102017;Name=SC3F9.13;gbkey=Gene;gene=SC3F9.13;gene_biotype=protein_coding;gene_synonym=SC3F9.13;locus_tag=SCO6578
NC_003888.3	RefSeq	CDS	7284641	7285816	.	+	0	ID=cds6513;Parent=gene6638;Dbxref=Genbank:NP_630658.1,GeneID:1102017;Name=NP_630658.1;Note=SC3F9.13%2C unknown%2C len: 391 aa%3B contains PS00730 AP endonucleases family 2 signature 2;gbkey=CDS;gene=SC3F9.13;product=hypothetical protein;protein_id=NP_630658.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7285265	7285288	.	+	.	ID=id8593;Dbxref=GeneID:1102017;Note=PS00730 AP endonucleases family 2 signature 2;gbkey=misc_feature;gene=SC3F9.13
NC_003888.3	RefSeq	ribosome_entry_site	7285802	7285806	.	+	.	ID=id8594;Dbxref=GeneID:1102017;Note=possible RBS upstream of SC3F9.14;gbkey=RBS;gene=SC3F9.13
NC_003888.3	RefSeq	gene	7285813	7287210	.	+	.	ID=gene6639;Dbxref=GeneID:1102018;Name=SC3F9.14;gbkey=Gene;gene=SC3F9.14;gene_biotype=protein_coding;gene_synonym=SC3F9.14;locus_tag=SCO6579
NC_003888.3	RefSeq	CDS	7285813	7287210	.	+	0	ID=cds6514;Parent=gene6639;Dbxref=Genbank:NP_630659.1,GeneID:1102018;Name=NP_630659.1;Note=SC3F9.14%2C unknown%2C len: 465 aa%2C similar to TR:Q9Z4Z4 (EMBL:AL035707) hypothetical protein from Streptomyces coelicolor (462 aa) fasta scores%3B opt: 2206%2C Z-score: 2466.5%2C 70.575%25 identity (70.889%25 ungapped) in 452 aa overlap.;gbkey=CDS;gene=SC3F9.14;product=hypothetical protein;protein_id=NP_630659.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7287310	7287315	.	+	.	ID=id8595;Note=possible RBS upstream of SC3F9.15;gbkey=RBS
NC_003888.3	RefSeq	gene	7287325	7288539	.	+	.	ID=gene6640;Dbxref=GeneID:1102019;Name=SC3F9.15;gbkey=Gene;gene=SC3F9.15;gene_biotype=protein_coding;gene_synonym=SC3F9.15;locus_tag=SCO6580
NC_003888.3	RefSeq	CDS	7287325	7288539	.	+	0	ID=cds6515;Parent=gene6640;Dbxref=Genbank:NP_733707.1,GeneID:1102019;Name=NP_733707.1;Note=SC8A6.01%2C unknown%2C partial CDS%2C len: >215 aa%3B overlaps and extends SC3F9.15~SC3F9.15%2C unknown%2C partial CDS len: >224 aa;gbkey=CDS;gene=SC3F9.15;product=hypothetical protein;protein_id=NP_733707.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7288546	7288600	.	+	.	ID=id8596;Note=hairpin loop with 23 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7288619	7290049	.	-	.	ID=gene6641;Dbxref=GeneID:1102020;Name=SCO6581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6581
NC_003888.3	RefSeq	CDS	7288619	7290049	.	-	0	ID=cds6516;Parent=gene6641;Dbxref=Genbank:NP_630660.1,GeneID:1102020;Name=NP_630660.1;Note=SC8A6.02c%2C probable transmembrane transport protein%2C len: 476 aa%3B some similarity to e.g. TR:Q51330 (EMBL:U4007 5) oxalate:formate antiport protein from Oxalobacter formig enes (418 aa)%2C fasta scores%3B opt: 226 z-score: 230.1 E(): 1 .4e-05%2C 24.1%25 identity in 436 aa overlap;gbkey=CDS;product=transmembrane transport protein;protein_id=NP_630660.1;transl_table=11
NC_003888.3	RefSeq	gene	7290122	7292266	.	-	.	ID=gene6642;Dbxref=GeneID:1102021;Name=SCO6582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6582
NC_003888.3	RefSeq	CDS	7290122	7292266	.	-	0	ID=cds6517;Parent=gene6642;Dbxref=Genbank:NP_630661.1,GeneID:1102021;Name=NP_630661.1;Note=SC8A6.03c%2C unknown%2C len: 714 aa%3B similar to many hypothetical proteins including several from each of the arche ons Archaeoglobus fulgidus TR:O28341 (EMBL:AE000970) conser ved hypothetical protein AF1938(673 aa)%2C fasta scores%3B opt: 960 z-score: 1289.8 E(): 0%2C 35.6%25 identity in 693 aa overl ap and Pyrococcus horikoshii D1028624 (EMBL:AB009518) hypot hetical protein PHCV016 (460 aa)%2C fasta scores%3B opt: 1280 z -score: 1246.9 E(): 0%2C 44.3%25 identity in 461 aa overlap. Co ntains PS00216 Sugar transport proteins signature 1. Also s imilar to S. coelicolor hypothetical protein SC9B10.09 (E() : 6.1e-15%2C 33.9%25 identity in 375 aa overlap);gbkey=CDS;product=hypothetical protein;protein_id=NP_630661.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7291229	7291276	.	-	.	ID=id8597;Dbxref=GeneID:1102021;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7292271	7293503	.	-	.	ID=gene6643;Dbxref=GeneID:1102022;Name=SCO6583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6583
NC_003888.3	RefSeq	CDS	7292271	7293503	.	-	0	ID=cds6518;Parent=gene6643;Dbxref=Genbank:NP_630662.1,GeneID:1102022;Name=NP_630662.1;Note=catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA;gbkey=CDS;product=formyl-coenzyme A transferase;protein_id=NP_630662.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7293512	7293516	.	-	.	ID=id8598;Note=possible RBS upstream of SC8A6.04c;gbkey=RBS
NC_003888.3	RefSeq	gene	7293515	7295197	.	-	.	ID=gene6644;Dbxref=GeneID:1102023;Name=SCO6584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6584
NC_003888.3	RefSeq	CDS	7293515	7295197	.	-	0	ID=cds6519;Parent=gene6644;Dbxref=Genbank:NP_630663.1,GeneID:1102023;Name=NP_630663.1;Note=SC8A6.05c%2C probable TPP-requiring enzyme%2C len: 560 a a%3B similar to many e.g. ILVB_MYCTU probable acetolactate synthase (EC 4.1.3.18) (547 aa)%2C fasta scores%3B opt: 733 z-sco re: 1305.6 E(): 0%2C 36.4%25 identity in 557 aa overlap. Contai ns PS00187 Thiamine pyrophosphate enzymes signature and Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes%2C score 343.90%2C E-value 5e-106;gbkey=CDS;product=TPP-requiring enzyme;protein_id=NP_630663.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7293572	7295143	.	-	.	ID=id8599;Dbxref=GeneID:1102023;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine py rophosphate enzymes%2C score 343.90%2C E-value 5e-106;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7293851	7293910	.	-	.	ID=id8600;Dbxref=GeneID:1102023;Note=PS00187 Thiamine pyrophosphate enzymes signature;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7295205	7295208	.	-	.	ID=id8601;Note=possible RBS upstream of SC8A6.05c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7295331	7295335	.	+	.	ID=id8602;Note=possible RBS upstream of sucC1;gbkey=RBS
NC_003888.3	RefSeq	gene	7295341	7296492	.	+	.	ID=gene6645;Dbxref=GeneID:1102024;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=SCO6585
NC_003888.3	RefSeq	CDS	7295341	7296492	.	+	0	ID=cds6520;Parent=gene6645;Dbxref=Genbank:NP_630664.1,GeneID:1102024;Name=NP_630664.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA synthetase subunit beta;protein_id=NP_630664.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7296037	7296384	.	+	.	ID=id8603;Dbxref=GeneID:1102024;Note=Pfam match to entry PF00549 ligase-CoA%2C CoA-ligases%2C score 119.60%2C E-value 2.9e-32;gbkey=misc_feature;gene=sucC
NC_003888.3	RefSeq	ribosome_entry_site	7296491	7296496	.	+	.	ID=id8604;Note=possible RBS upstream of sucD1;gbkey=RBS
NC_003888.3	RefSeq	gene	7296507	7297433	.	+	.	ID=gene6646;Dbxref=GeneID:1102025;Name=SCO6586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6586
NC_003888.3	RefSeq	CDS	7296507	7297433	.	+	0	ID=cds6521;Parent=gene6646;Dbxref=Genbank:NP_630665.1,GeneID:1102025;Name=NP_630665.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=NP_630665.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7296915	7297352	.	+	.	ID=id8605;Dbxref=GeneID:1102025;Note=Pfam match to entry PF00549 ligase-CoA%2C CoA-ligases%2C score 132.10%2C E-value 9.3e-36;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7296972	7297055	.	+	.	ID=id8606;Dbxref=GeneID:1102025;Note=PS01216 ATP-citrate lyase / succinyl-CoA ligases fam ily signature 1;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7297218	7297259	.	+	.	ID=id8607;Dbxref=GeneID:1102025;Note=PS00399 ATP-citrate lyase / succinyl-CoA ligases fam ily active site;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7297419	7297422	.	+	.	ID=id8608;Dbxref=GeneID:1102025;Note=possible RBS upstream of SC8A6.08;gbkey=RBS
NC_003888.3	RefSeq	gene	7297430	7298992	.	+	.	ID=gene6647;Dbxref=GeneID:1102026;Name=SCO6587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6587
NC_003888.3	RefSeq	CDS	7297430	7298992	.	+	0	ID=cds6522;Parent=gene6647;Dbxref=Genbank:NP_630666.1,GeneID:1102026;Name=NP_630666.1;Note=SC8A6.08%2C probable dehydrogenase%2C len: 520 aa%3B some similarity to many diverse dehydrogenases%2C e.g. SSDH_RAT su ccinate semialdehyde dehydrogenase (488 aa)%2C fasta scores%3B opt: 308 z-score: 301.8 E(): 1.4e-09%2C 26.0%25 identity in 439 aa overlap;gbkey=CDS;product=dehydrogenase;protein_id=NP_630666.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7298981	7299072	.	+	.	ID=id8609;Note=4x 23 bp degenerate repeats;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7299120	7300451	.	-	.	ID=gene6648;Dbxref=GeneID:1102027;Name=SCO6588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6588
NC_003888.3	RefSeq	CDS	7299120	7300451	.	-	0	ID=cds6523;Parent=gene6648;Dbxref=Genbank:NP_630667.1,GeneID:1102027;Name=NP_630667.1;Note=SC8A6.09c%2C unknown%2C len: 443 aa%3B some similarity to M. tuberculosis hypothetical protein Y029_MYCTU MTCY373.09 C (521 aa)%2C fasta scores%3B opt: 371 z-score: 502.3 E(): 9.7e -21%2C 28.3%25 identity in 446 aa overlap;gbkey=CDS;product=hypothetical protein;protein_id=NP_630667.1;transl_table=11
NC_003888.3	RefSeq	gene	7300604	7300688	.	+	.	ID=gene6649;Dbxref=GeneID:3240065;Name=SCOt62;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt62
NC_003888.3	RefSeq	tRNA	7300604	7300688	.	+	.	ID=rna82;Parent=gene6649;Dbxref=GeneID:3240065;Note=tRNA Leu%3B anticodon GAG;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	exon	7300604	7300688	.	+	.	ID=id8610;Parent=rna82;Dbxref=GeneID:3240065;Note=tRNA Leu%3B anticodon GAG;gbkey=tRNA;product=tRNA-Leu
NC_003888.3	RefSeq	gene	7301063	7303123	.	+	.	ID=gene6650;Dbxref=GeneID:1102028;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;gene_synonym=fusA;locus_tag=SCO6589
NC_003888.3	RefSeq	CDS	7301063	7303123	.	+	0	ID=cds6524;Parent=gene6650;Dbxref=Genbank:NP_630668.1,GeneID:1102028;Name=NP_630668.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=NP_630668.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7301081	7302505	.	+	.	ID=id8611;Dbxref=GeneID:1102028;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation fac tor Tu family (contains ATP/GTP binding P-loop)%2C score 521. 10%2C E-value 7.8e-153;gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	7301108	7301131	.	+	.	ID=id8612;Dbxref=GeneID:1102028;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	7301210	7301257	.	+	.	ID=id8613;Dbxref=GeneID:1102028;Note=PS00301 GTP-binding elongation factors signature;gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	sequence_feature	7302578	7303114	.	+	.	ID=id8614;Dbxref=GeneID:1102028;Note=Pfam match to entry PF00679 EFG_C%2C Elongation factor G C-terminus%2C score 214.30%2C E-value 1.8e-60;gbkey=misc_feature;gene=fusA
NC_003888.3	RefSeq	stem_loop	7303161	7303203	.	+	.	ID=id8615;Note=hairpin loop with 18/19 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	stem_loop	7303249	7303288	.	+	.	ID=id8616;Note=hairpin loop with 18 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7303361	7305568	.	-	.	ID=gene6651;Dbxref=GeneID:1102029;Name=SCO6590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6590
NC_003888.3	RefSeq	CDS	7303361	7305568	.	-	0	ID=cds6525;Parent=gene6651;Dbxref=Genbank:NP_630669.1,GeneID:1102029;Name=NP_630669.1;Note=SC8A6.11c%2C probable  esterase%2C len: 735 aa%3B similar to TR:Q54345 (EMBL:Z50108) esterase precursor from Streptomyces lividans (509 aa)%2C fasta scores%3B opt: 553 z-sc ore: 526.3 E(): 4.5e-22%2C 38.2%25 identity in 403 aa overlap a nd to other membres of the trypsin family. Contains probabl e N-terminal signal sequence and Pfam match to entry PF0008 9 trypsin%2C Trypsin%2C score 31.60%2C E-value 4.4e-07;gbkey=CDS;product=esterase;protein_id=NP_630669.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7304831	7305478	.	-	.	ID=id8617;Dbxref=GeneID:1102029;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 31.60%2C E-value 4.4e-07;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7305579	7305582	.	-	.	ID=id8618;Note=possible RBS upstream of SC8A6.11c;gbkey=RBS
NC_003888.3	RefSeq	gene	7305602	7306108	.	-	.	ID=gene6652;Dbxref=GeneID:1102030;Name=SCO6591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6591
NC_003888.3	RefSeq	CDS	7305602	7306108	.	-	0	ID=cds6526;Parent=gene6652;Dbxref=Genbank:NP_630670.1,GeneID:1102030;Name=NP_630670.1;Note=SC8A6.12c%2C possible hypothetical protein%2C len: 168 aa%3B c ontains possible N-terminal signal sequence;gbkey=CDS;product=hypothetical protein;protein_id=NP_630670.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7306114	7306117	.	-	.	ID=id8619;Note=possible RBS upstream of SC8A6.12c;gbkey=RBS
NC_003888.3	RefSeq	gene	7306230	7306619	.	-	.	ID=gene6653;Dbxref=GeneID:1102031;Name=SCO6592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6592
NC_003888.3	RefSeq	CDS	7306230	7306619	.	-	0	ID=cds6527;Parent=gene6653;Dbxref=Genbank:NP_630671.1,GeneID:1102031;Name=NP_630671.1;Note=SC8A6.13c%2C probable hypothetical protein%2C len: 129 aa%3B c ontains N-terminal signal sequence and appropriately positi oned PS00013 Prokaryotic membrane lipoprotein lipid attachm ent site;gbkey=CDS;product=hypothetical protein;protein_id=NP_630671.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7306545	7306577	.	-	.	ID=id8620;Dbxref=GeneID:1102031;Note=PS00013 Prokaryotic membrane lipoprotein lipid attac hment site;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7306616	7310059	.	-	.	ID=gene6654;Dbxref=GeneID:1102032;Name=SCO6593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6593
NC_003888.3	RefSeq	CDS	7306616	7310059	.	-	0	ID=cds6528;Parent=gene6654;Dbxref=Genbank:NP_630672.1,GeneID:1102032;Name=NP_630672.1;Note=SC8A6.14c%2C unknown%2C len: 1147 aa%3B contains two Ala-rich domains%2C PS00017 ATP/GTP-binding site motif A (P-loop) and probable coiled-coil regions from 238 to 292%2C 399 to 441%2C 445 to 488%2C 490 to 573%2C 786 to 820%2C and 829 to 871;gbkey=CDS;product=hypothetical protein;protein_id=NP_630672.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7307324	7307347	.	-	.	ID=id8621;Dbxref=GeneID:1102032;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7310066	7310069	.	-	.	ID=id8622;Note=possible RBS upstream of SC8A6.14c;gbkey=RBS
NC_003888.3	RefSeq	gene	7310408	7312216	.	-	.	ID=gene6655;Dbxref=GeneID:1102033;Name=SCO6594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6594
NC_003888.3	RefSeq	CDS	7310408	7312216	.	-	0	ID=cds6529;Parent=gene6655;Dbxref=Genbank:NP_630673.1,GeneID:1102033;Name=NP_630673.1;Note=SC8A6.15c%2C probable hypothetical protein%2C len: 602 aa%3B c ontains probable N-terminal signal sequence;gbkey=CDS;product=hypothetical protein;protein_id=NP_630673.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7312227	7312232	.	-	.	ID=id8623;Note=possible RBS upstream of SC8A6.15c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7312472	7312478	.	+	.	ID=id8624;Note=possible RBS upstream of SC8A6.16;gbkey=RBS
NC_003888.3	RefSeq	gene	7312483	7313565	.	+	.	ID=gene6656;Dbxref=GeneID:1102034;Name=SCO6595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6595
NC_003888.3	RefSeq	CDS	7312483	7313565	.	+	0	ID=cds6530;Parent=gene6656;Dbxref=Genbank:NP_630674.1,GeneID:1102034;Name=NP_630674.1;Note=SC8A6.16%2C probable hypothetical protein%2C len: 380 aa%3B co ntains N-terminal signal sequence and TTA Leu codon%2C possib le target for action of bldA;gbkey=CDS;product=hypothetical protein;protein_id=NP_630674.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7312531	7312533	.	+	.	ID=id8625;Dbxref=GeneID:1102034;Note=TTA Leu codon%2C possible target for action of bldA;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7313646	7313649	.	+	.	ID=id8626;Note=possible RBS upstream of SC8A6.17;gbkey=RBS
NC_003888.3	RefSeq	gene	7313660	7315429	.	+	.	ID=gene6657;Dbxref=GeneID:1102035;Name=SCO6596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6596
NC_003888.3	RefSeq	CDS	7313660	7315429	.	+	0	ID=cds6531;Parent=gene6657;Dbxref=Genbank:NP_630675.1,GeneID:1102035;Name=NP_630675.1;Note=SC8A6.17%2C probable hypothetical protein%2C len: 589 aa%3B co ntains N-terminal signal sequence and PS00213 Lipocalin sig nature;gbkey=CDS;product=hypothetical protein;protein_id=NP_630675.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7314602	7314640	.	+	.	ID=id8627;Dbxref=GeneID:1102035;Note=PS00213 Lipocalin signature;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7315446	7315452	.	+	.	ID=id8628;Note=possible RBS upstream of SC8A6.18;gbkey=RBS
NC_003888.3	RefSeq	gene	7315461	7318040	.	+	.	ID=gene6658;Dbxref=GeneID:1102036;Name=SCO6597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6597
NC_003888.3	RefSeq	CDS	7315461	7318040	.	+	0	ID=cds6532;Parent=gene6658;Dbxref=Genbank:NP_630676.1,GeneID:1102036;Name=NP_630676.1;Note=SC8A6.18%2C probable beta-glucosidase%2C len: 859 aa%3B si milar to many e.g. BGLS_AGRTU beta-glucosidase (EC 3.2.1.21 ) (818 aa)%2C fasta scores%3B opt: 810 z-score: 1139.9 E(): 0%2C 37.2%25 identity in 862 aa overlap;gbkey=CDS;product=beta-glucosidase;protein_id=NP_630676.1;transl_table=11
NC_003888.3	RefSeq	gene	7318137	7319177	.	+	.	ID=gene6659;Dbxref=GeneID:1102037;Name=SC8A6.19;gbkey=Gene;gene=SC8A6.19;gene_biotype=protein_coding;gene_synonym=SC8A6.19;locus_tag=SCO6598
NC_003888.3	RefSeq	CDS	7318137	7319177	.	+	0	ID=cds6533;Parent=gene6659;Dbxref=Genbank:NP_630677.1,GeneID:1102037;Name=NP_630677.1;Note=SC8A6.19%2C probable transcriptional regulator%2C len: 246 aa%3B similar to many members of the lacI family%2C e.g. CCP A_BACSU glucose-resistance amylase regulator (334 aa)%2C fast a scores%3B opt: 313 z-score: 569.6 E(): 1.7e-24%2C 31.2%25 identity in 317 aa overlap. Contains PS00356 Bacterial regulatory proteins%2C lacI family signature%2C helix-tur-helix motif at aa 7-28 (Score 2389%2C +7.32 SD) and Pfam matches to entry P F00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family%2C score 86.50%2C E-value 5.3e-22 and Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 43.00%2C E-value 1e-10;gbkey=CDS;gene=SC8A6.19;product=transcriptional regulator;protein_id=NP_630677.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7318146	7318229	.	+	.	ID=id8629;Dbxref=GeneID:1102037;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulato ry proteins%2C lacI family%2C score 43.00%2C E-value 1e-10;gbkey=misc_feature;gene=SC8A6.19
NC_003888.3	RefSeq	sequence_feature	7318158	7318214	.	+	.	ID=id8630;Dbxref=GeneID:1102037;Note=PS00356 Bacterial regulatory proteins%2C lacI family s ignature;gbkey=misc_feature;gene=SC8A6.19
NC_003888.3	RefSeq	sequence_feature	7318368	7319087	.	+	.	ID=id8631;Dbxref=GeneID:1102037;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Peripla smic binding proteins and LacI family.%2C score 86.50%2C E-valu e 5.3e-22;gbkey=misc_feature;gene=SC8A6.19
NC_003888.3	RefSeq	gene	7319193	7319846	.	-	.	ID=gene6660;Dbxref=GeneID:1102038;Name=SC8A6.20c;gbkey=Gene;gene=SC8A6.20c;gene_biotype=protein_coding;gene_synonym=SC8A6.20c;locus_tag=SCO6599
NC_003888.3	RefSeq	CDS	7319193	7319846	.	-	0	ID=cds6534;Parent=gene6660;Dbxref=Genbank:NP_630678.1,GeneID:1102038;Name=NP_630678.1;Note=SC8A6.20c%2C probable transcriptional regulator%2C len: 217 aa%3B some similarity to members of the tetR family e.g. TER4_ECOLI tetracycline repressor protein class D (217 aa)%2C fasta scores%3B opt: 158 z-score: 233.4 E(): 9.2e-06%2C 35.2%25 identity in 88 aa overlap. Contains probable helix-turn-helix motif at aa 29-50 (Score 1279%2C +3.54 SD) and Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 31.90%2C E-value 4.2e-07;gbkey=CDS;gene=SC8A6.20c;product=transcriptional regulator;protein_id=NP_630678.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7319673	7319813	.	-	.	ID=id8632;Dbxref=GeneID:1102038;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulato ry proteins%2C tetR family%2C score 31.90%2C E-value 4.2e-07;gbkey=misc_feature;gene=SC8A6.20c
NC_003888.3	RefSeq	ribosome_entry_site	7319856	7319859	.	-	.	ID=id8633;Note=possible RBS upstream of SC8A6.20c;gbkey=RBS
NC_003888.3	RefSeq	gene	7320012	7321337	.	-	.	ID=gene6661;Dbxref=GeneID:1102039;Name=SC8A6.21c;gbkey=Gene;gene=SC8A6.21c;gene_biotype=protein_coding;gene_synonym=SC8A6.21c;locus_tag=SCO6600
NC_003888.3	RefSeq	CDS	7320012	7321337	.	-	0	ID=cds6535;Parent=gene6661;Dbxref=Genbank:NP_630679.1,GeneID:1102039;Name=NP_630679.1;Note=SC8A6.21c%2C probable transcriptional regulator%2C len: 441 aa%3B some similarity to members of the ROK family e.g. XYLR_ANATH xylose repressor (399 aa)%2C fasta scores%3B opt: 365 z-score: 361.7 E(): 6.6e-13%2C 27.2%25 identity in 397 aa over lap. Contains Pfam match to entry PF00480 ROK%2C ROK family%2C score 38.10%2C E-value 3e-10;gbkey=CDS;gene=SC8A6.21c;product=transcriptional regulator;protein_id=NP_630679.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7320492	7320740	.	-	.	ID=id8634;Dbxref=GeneID:1102039;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 3 8.10%2C E-value 3e-10;gbkey=misc_feature;gene=SC8A6.21c
NC_003888.3	RefSeq	ribosome_entry_site	7321344	7321348	.	-	.	ID=id8635;Note=possible RBS upstream of SC1A6.21c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7321506	7321510	.	+	.	ID=id8636;Note=possible RBS upstream of SC8A6.22;gbkey=RBS
NC_003888.3	RefSeq	gene	7321513	7322829	.	+	.	ID=gene6662;Dbxref=GeneID:1102040;Name=SCO6601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6601
NC_003888.3	RefSeq	CDS	7321513	7322829	.	+	0	ID=cds6536;Parent=gene6662;Dbxref=Genbank:NP_630680.1,GeneID:1102040;Name=NP_630680.1;Note=SC8A6.22%2C probable  sugar binding protein%2C l en: 438 aa%3B similar to e.g. S. coelicolor TR:P72397 (EMBL:Y 07706)  maltose-binding pootein malE (423 aa)%2C fast a scores%3B opt: 425 z-score: 307.7 E(): 6.7e-10%2C 28.9%25 ident ity in 439 aa overlap. Contains N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane l ipoprotein lipid attachment site;gbkey=CDS;product=sugar binding protein;protein_id=NP_630680.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7321549	7321581	.	+	.	ID=id8637;Dbxref=GeneID:1102040;Note=PS00013 Prokaryotic membrane lipoprotein lipid attac hment site;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7322891	7323919	.	+	.	ID=gene6663;Dbxref=GeneID:1102041;Name=SCO6602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6602
NC_003888.3	RefSeq	CDS	7322891	7323919	.	+	0	ID=cds6537;Parent=gene6663;Dbxref=Genbank:NP_630681.1,GeneID:1102041;Name=NP_630681.1;Note=SC8A6.23%2C probable transmembrane sugar transport pro tein%2C len: 342 aa%3B similar to e.g. S. coelicolor TR:P72398 (EMBL:Y07706) maltose permease malF (334 aa)%2C fast a scores%3B opt: 494 z-score: 521.6 E(): 8.2e-22%2C 32.6%25 ident ity in 322 aa overlap. Contains PS00017 ATP/GTP-binding sit e motif A (P-loop)%2C PS00402 Binding-protein-dependent trans port systems inner membrane comp signature and Pfam match t o entry PF00528 BPD_transp%2C Binding-protein-dependent trans port systems inner membrane component%2C score 42.00%2C E-value 1.3e-08;gbkey=CDS;product=transmembrane sugar transport protein;protein_id=NP_630681.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7322921	7322944	.	+	.	ID=id8638;Dbxref=GeneID:1102041;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7323539	7323778	.	+	.	ID=id8639;Dbxref=GeneID:1102041;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-prot ein-dependent transport systems inner membrane component%2C s core 42.00%2C E-value 1.3e-08;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7323542	7323628	.	+	.	ID=id8640;Dbxref=GeneID:1102041;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7323927	7324766	.	+	.	ID=gene6664;Dbxref=GeneID:1102042;Name=SCO6603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCO6603
NC_003888.3	RefSeq	CDS	7323927	7324766	.	+	0	ID=cds6538;Parent=gene6664;Dbxref=Genbank:NP_630682.1,GeneID:1102042;Name=NP_630682.1;Note=SC8A6.24%2C probable transmembrane sugar transport pro tein%2C len: 279 aa%3B similar to e.g. S. coelicolor TR:P72399 (EMBL:Y07706) maltose permease malG (302 aa)%2C fast a scores%3B opt: 542 z-score: 755.1 E(): 0%2C 36.7%25 identity in 270 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature and Pfam m atch to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 75.20%2C E -value 1.3e-18;gbkey=CDS;product=transmembrane sugar transport protein;protein_id=NP_630682.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7324419	7324646	.	+	.	ID=id8641;Dbxref=GeneID:1102042;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-prot ein-dependent transport systems inner membrane component%2C s core 75.20%2C E-value 1.3e-18;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7324422	7324508	.	+	.	ID=id8642;Dbxref=GeneID:1102042;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp signature;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7324752	7324755	.	+	.	ID=id8643;Dbxref=GeneID:1102042;Note=possible RBS upstream of SC8A6.25;gbkey=RBS
NC_003888.3	RefSeq	gene	7324763	7326169	.	+	.	ID=gene6665;Dbxref=GeneID:1102043;Name=SC1F2.01;gbkey=Gene;gene=SC1F2.01;gene_biotype=protein_coding;gene_synonym=SC1F2.01;locus_tag=SCO6604
NC_003888.3	RefSeq	CDS	7324763	7326169	.	+	0	ID=cds6539;Parent=gene6665;Dbxref=Genbank:NP_733708.1,GeneID:1102043;Name=NP_733708.1;Note=SC1F2.01%2C probable beta-glucosidase%2C partial CDS%2C len >311 aa%3B similar to mnay e.g. BGLS_AGRSP beta-glucosidase (EC 3.2.1.21) (459 aa)%2C fasta scores%3B opt: 784 z-score: 986.7 E(): 0%2C 42.5%25 identity in 315 aa overlap. Overlaps and extends SC8A6.25. Contains Pfam match to entry PF00232 glycosyl_hydro1%2C Glycosyl hydrolases family 1%2C score 350.20%2C E-value 2.2e-101~SC8A6.25%2C probable beta-glucosidase%2C partial CDS%2C le n >190 aa%3B highly similar to many e.g. BGLA_BACCI beta-glucosidase (EC 3.2.1.21) (449 aa)%2C fasta scores%3B opt: 752 z-sc ore: 1084.7 E(): 0%2C 59.9%25 identity in 167 aa overlap. Conta ins PS00653 Glycosyl hydrolases family 1 N-terminal signatu re and Pfam match to entry PF00232 glycosyl_hydro1%2C Glycosy l hydrolases family 1%2C score 348.50%2C E-value 7.3e-101;gbkey=CDS;gene=SC1F2.01;product=beta-glucosidase;protein_id=NP_733708.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7324826	7325332	.	+	.	ID=id8644;Dbxref=GeneID:1102043;Note=Pfam match to entry PF00232 glycosyl_hydro1%2C Glycosy l hydrolases family 1%2C score 348.50%2C E-value 7.3e-101;gbkey=misc_feature;gene=SC1F2.01
NC_003888.3	RefSeq	sequence_feature	7324844	7324888	.	+	.	ID=id8645;Dbxref=GeneID:1102043;Note=PS00653 Glycosyl hydrolases family 1 N-terminal sign ature;gbkey=misc_feature;gene=SC1F2.01
NC_003888.3	RefSeq	sequence_feature	7325234	7326160	.	+	.	ID=id8646;Dbxref=GeneID:1102043;Note=Pfam match to entry PF00232 glycosyl_hydro1%2C Glycosyl hydrolases family 1%2C score 350.20%2C E-value 2.2e-101;gbkey=misc_feature;gene=SC1F2.01
NC_003888.3	RefSeq	gene	7326284	7326469	.	+	.	ID=gene6666;Dbxref=GeneID:1102044;Name=SCO6605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SCO6605;pseudo=true
NC_003888.3	RefSeq	sequence_feature	7326284	7326469	.	+	.	ID=id8647;Dbxref=GeneID:1102044;Note=SC1F2.02%2C probable beta-glucanase pseudogene fragment%2C len: 61 aa%3B this appears to be a gene remnant similar to part of e.g. TR:O68641 (EMBL:AF052745) beta-1%2C3-glucanase II from Oerskovia xanthineolytica (435 aa)%2C fasta scores%3B opt: 100 z-score: 207.7 E(): 0.00025%2C 38.3%25 identity in 60 aa overlap. There is no start codon;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7326508	7327410	.	-	.	ID=gene6667;Dbxref=GeneID:1102045;Name=SC1F2.03c;gbkey=Gene;gene=SC1F2.03c;gene_biotype=protein_coding;gene_synonym=SC1F2.03c;locus_tag=SCO6606
NC_003888.3	RefSeq	CDS	7326508	7327410	.	-	0	ID=cds6540;Parent=gene6667;Dbxref=Genbank:NP_630683.1,GeneID:1102045;Name=NP_630683.1;Note=SC1F2.03c%2C unknown%2C len: 300 aa%3B similar to upstream gene SC1F3.04%2C E(): 0%2C 48.8%25 identity in 260 aa overlap anbd to TR:Q9L173 (EMBL:AL158057) Streptomyces coelicolor hypothetical protein SC10G8.32c%2C 263 aa%3B fasta scores: opt: 791 Z-score: 879.8 E(): 2.3e-41%3B 49.237%25 identity in 262 aa overlap;gbkey=CDS;gene=SC1F2.03c;product=hypothetical protein;protein_id=NP_630683.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7327532	7327537	.	+	.	ID=id8648;Note=possible RBS upsteream of SC1F3.04;gbkey=RBS
NC_003888.3	RefSeq	gene	7327541	7328326	.	+	.	ID=gene6668;Dbxref=GeneID:1102046;Name=SC1F3.04;gbkey=Gene;gene=SC1F3.04;gene_biotype=protein_coding;gene_synonym=SC1F3.04;locus_tag=SCO6607
NC_003888.3	RefSeq	CDS	7327541	7328326	.	+	0	ID=cds6541;Parent=gene6668;Dbxref=Genbank:NP_630684.1,GeneID:1102046;Name=NP_630684.1;Note=SC1F3.04%2C unknown%2C len: 261 aa%3B similar to many Streptomyces coelicolor e.g. upstream gene SC1F2.03c%2CE(): 0%2C 48.8%25 identity in 260 aa overlap;gbkey=CDS;gene=SC1F3.04;product=hypothetical protein;protein_id=NP_630684.1;transl_table=11
NC_003888.3	RefSeq	gene	7328456	7330114	.	+	.	ID=gene6669;Dbxref=GeneID:1102047;Name=SC1F2.05;gbkey=Gene;gene=SC1F2.05;gene_biotype=protein_coding;gene_synonym=SC1F2.05;locus_tag=SCO6608
NC_003888.3	RefSeq	CDS	7328456	7330114	.	+	0	ID=cds6542;Parent=gene6669;Dbxref=Genbank:NP_630685.1,GeneID:1102047;Name=NP_630685.1;Note=SC1F2.05%2C probable hypothetical protein%2C len: 552 aa%3B contains N-terminal signal sequence;gbkey=CDS;gene=SC1F2.05;product=hypothetical protein;protein_id=NP_630685.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7330141	7330224	.	+	.	ID=id8649;Note=12 degenerate repeats of ACGCAC(C /A);gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	7330238	7330241	.	+	.	ID=id8650;Note=possible RBS upstream of SC1F2.06;gbkey=RBS
NC_003888.3	RefSeq	gene	7330247	7331275	.	+	.	ID=gene6670;Dbxref=GeneID:1102048;Name=SC1F2.06;gbkey=Gene;gene=SC1F2.06;gene_biotype=protein_coding;gene_synonym=SC1F2.06;locus_tag=SCO6609
NC_003888.3	RefSeq	CDS	7330247	7331275	.	+	0	ID=cds6543;Parent=gene6670;Dbxref=Genbank:NP_630686.1,GeneID:1102048;Name=NP_630686.1;Note=SC1F2.06%2C probable hypothetical protein%2C len: 342 aa%3B some similatity to  antigenic proteins 85A%2C 85B and 85C from Mycobacteria e.g. A85B_MYCLE (327 aa)%2C fasta scores%3B opt: 325 z-score: 247.2 E(): 1.6e-06%2C 28.5%25 identity in 319 aa overlap and to  antigenic protein PS1 from Cornebacterium glutamicum CSP1_CORGL (657 aa)%2C fasta scores%3B opt: 479 z-score: 421.7 E(): 3e-16%2C 28.2%25 identity in 333 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC1F2.06;product=hypothetical protein;protein_id=NP_630686.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7331416	7331419	.	+	.	ID=id8651;Note=possible RBS upstream of SC1F2.07;gbkey=RBS
NC_003888.3	RefSeq	gene	7331426	7332799	.	+	.	ID=gene6671;Dbxref=GeneID:1102049;Name=SC1F2.07;gbkey=Gene;gene=SC1F2.07;gene_biotype=protein_coding;gene_synonym=SC1F2.07;locus_tag=SCO6610
NC_003888.3	RefSeq	CDS	7331426	7332799	.	+	0	ID=cds6544;Parent=gene6671;Dbxref=Genbank:NP_630687.1,GeneID:1102049;Name=NP_630687.1;Note=SC1F2.07%2C probable hypothetical protein%2C len: 457 aa%3B contains N-terminal signal sequence. Also contains PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature and Pfam match to entry PF00099 zn-protease%2C Zinc-binding metalloprotease domain%2C score 15.20%2C E-value 0.81%3B but no apparent similarities to proteases. Also contains possible helix-turn-helix motif at aa 378-399 (Score 1335%2C +3.73 SD);gbkey=CDS;gene=SC1F2.07;product=hypothetical protein;protein_id=NP_630687.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7332161	7332205	.	+	.	ID=id8652;Dbxref=GeneID:1102049;Note=Pfam match to entry PF00099 zn-protease%2C Zinc-binding metalloprotease domain%2C score 15.20%2C E-value 0.81;gbkey=misc_feature;gene=SC1F2.07
NC_003888.3	RefSeq	sequence_feature	7332164	7332193	.	+	.	ID=id8653;Dbxref=GeneID:1102049;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC1F2.07
NC_003888.3	RefSeq	gene	7332818	7333378	.	-	.	ID=gene6672;Dbxref=GeneID:1102050;Name=SC1F2.08c;gbkey=Gene;gene=SC1F2.08c;gene_biotype=protein_coding;gene_synonym=SC1F2.08c;locus_tag=SCO6611
NC_003888.3	RefSeq	CDS	7332818	7333378	.	-	0	ID=cds6545;Parent=gene6672;Dbxref=Genbank:NP_630688.1,GeneID:1102050;Name=NP_630688.1;Note=SC1F2.08c%2C unknown%2C len: 186 aa;gbkey=CDS;gene=SC1F2.08c;product=hypothetical protein;protein_id=NP_630688.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7333385	7333390	.	-	.	ID=id8654;Note=possible RBS upstream of SC1F2.08c;gbkey=RBS
NC_003888.3	RefSeq	gene	7333403	7334332	.	-	.	ID=gene6673;Dbxref=GeneID:1102051;Name=SC1F2.09c;gbkey=Gene;gene=SC1F2.09c;gene_biotype=protein_coding;gene_synonym=SC1F2.09c;locus_tag=SCO6612
NC_003888.3	RefSeq	CDS	7333403	7334332	.	-	0	ID=cds6546;Parent=gene6673;Dbxref=Genbank:NP_630689.1,GeneID:1102051;Name=NP_630689.1;Note=SC1F2.09c%2C probable hydrolase%2C len: 309 aa%3B similar to many e.g. XYLF_PSEPU 2-hydroxymuconic semialdehyde hydrolase (281 aa)%2C fasta scores%3B opt: 236 z-score: 348.2 E(): 3.8e-12%2C 29.0%25 identity in 283 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha /beta hydrolase fold%2C score 52.80%2C E-value 7.5e-12;gbkey=CDS;gene=SC1F2.09c;product=hydrolase;protein_id=NP_630689.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7333463	7334140	.	-	.	ID=id8655;Dbxref=GeneID:1102051;Note=Pfam match to entry PF00561 abhydrolase%2C alpha /beta hydrolase fold%2C score 52.80%2C E-value 7.5e-12;gbkey=misc_feature;gene=SC1F2.09c
NC_003888.3	RefSeq	ribosome_entry_site	7334440	7334446	.	+	.	ID=id8656;Note=possible RBS upstream of SC1F2.10;gbkey=RBS
NC_003888.3	RefSeq	gene	7334456	7334863	.	+	.	ID=gene6674;Dbxref=GeneID:1102052;Name=SC1F2.10;gbkey=Gene;gene=SC1F2.10;gene_biotype=protein_coding;gene_synonym=SC1F2.10;locus_tag=SCO6613
NC_003888.3	RefSeq	CDS	7334456	7334863	.	+	0	ID=cds6547;Parent=gene6674;Dbxref=Genbank:NP_630690.1,GeneID:1102052;Name=NP_630690.1;Note=SC1F2.10%2C unknown%2C len: 135 aa%3B similar to hypothetical proteins from several organisms e.g. YTFH_ECOLI (156 aa)%2C fasta scores%3B opt: 315 z-score: 460.2 E(): 2.2e-18%2C 40.5%25 identity in 116 aa overlap;gbkey=CDS;gene=SC1F2.10;product=hypothetical protein;protein_id=NP_630690.1;transl_table=11
NC_003888.3	RefSeq	gene	7335116	7336225	.	+	.	ID=gene6675;Dbxref=GeneID:1102053;Name=SC1F2.11;gbkey=Gene;gene=SC1F2.11;gene_biotype=protein_coding;gene_synonym=SC1F2.11;locus_tag=SCO6614
NC_003888.3	RefSeq	CDS	7335116	7336225	.	+	0	ID=cds6548;Parent=gene6675;Dbxref=Genbank:NP_630691.1,GeneID:1102053;Name=NP_630691.1;Note=SC1F2.11%2C probable membrane protein%2C len: 369 aa%3B contains a possible transmembrane domain around aa 100;gbkey=CDS;gene=SC1F2.11;product=hypothetical protein;protein_id=NP_630691.1;transl_table=11
NC_003888.3	RefSeq	gene	7336237	7337439	.	+	.	ID=gene6676;Dbxref=GeneID:1102054;Name=SC1F2.12;gbkey=Gene;gene=SC1F2.12;gene_biotype=protein_coding;gene_synonym=SC1F2.12;locus_tag=SCO6615
NC_003888.3	RefSeq	CDS	7336237	7337439	.	+	0	ID=cds6549;Parent=gene6676;Dbxref=Genbank:NP_630692.1,GeneID:1102054;Name=NP_630692.1;Note=SC1F2.12. unknown%2C len: 400 aa;gbkey=CDS;gene=SC1F2.12;product=hypothetical protein;protein_id=NP_630692.1;transl_table=11
NC_003888.3	RefSeq	gene	7337453	7338883	.	-	.	ID=gene6677;Dbxref=GeneID:1102055;Name=SC1F2.13c;gbkey=Gene;gene=SC1F2.13c;gene_biotype=protein_coding;gene_synonym=SC1F2.13c;locus_tag=SCO6616
NC_003888.3	RefSeq	CDS	7337453	7338883	.	-	0	ID=cds6550;Parent=gene6677;Dbxref=Genbank:NP_630693.1,GeneID:1102055;Name=NP_630693.1;Note=SC1F2.13c%2C hypothetical protein%2C len: 476 aa%3B similar to several proteins from M. tuberculosis e.g. TR:O05897 (EMBL:Z95121) hypothetical protein MTCY20B11.29 (462 aa)%2C fasta scores%3B opt: 573 z-score: 448.5 E(): 9.7e-18%2C 32.3%25 identity in 400 aa overlap. Contains possible N-terminal signal sequence;gbkey=CDS;gene=SC1F2.13c;product=hypothetical protein;protein_id=NP_630693.1;transl_table=11
NC_003888.3	RefSeq	gene	7338876	7339205	.	-	.	ID=gene6678;Dbxref=GeneID:1102056;Name=SC1F2.14c;gbkey=Gene;gene=SC1F2.14c;gene_biotype=protein_coding;gene_synonym=SC1F2.14c;locus_tag=SCO6617
NC_003888.3	RefSeq	CDS	7338876	7339205	.	-	0	ID=cds6551;Parent=gene6678;Dbxref=Genbank:NP_630694.1,GeneID:1102056;Name=NP_630694.1;Note=SC1F2.14c%2C unknown%2C len: 109 aa;gbkey=CDS;gene=SC1F2.14c;product=hypothetical protein;protein_id=NP_630694.1;transl_table=11
NC_003888.3	RefSeq	gene	7339269	7339949	.	-	.	ID=gene6679;Dbxref=GeneID:1102057;Name=SC1F2.15c;gbkey=Gene;gene=SC1F2.15c;gene_biotype=protein_coding;gene_synonym=SC1F2.15c;locus_tag=SCO6618
NC_003888.3	RefSeq	CDS	7339269	7339949	.	-	0	ID=cds6552;Parent=gene6679;Dbxref=Genbank:NP_630695.1,GeneID:1102057;Name=NP_630695.1;Note=SC1F2.15c%2C unknown%2C len: 226 aa;gbkey=CDS;gene=SC1F2.15c;product=hypothetical protein;protein_id=NP_630695.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7339957	7339960	.	-	.	ID=id8657;Note=possible RBS upstream of SC1F2.15c;gbkey=RBS
NC_003888.3	RefSeq	gene	7339983	7340813	.	-	.	ID=gene6680;Dbxref=GeneID:1102058;Name=SC1F2.16c;gbkey=Gene;gene=SC1F2.16c;gene_biotype=protein_coding;gene_synonym=SC1F2.16c;locus_tag=SCO6619
NC_003888.3	RefSeq	CDS	7339983	7340813	.	-	0	ID=cds6553;Parent=gene6680;Dbxref=Genbank:NP_630696.1,GeneID:1102058;Name=NP_630696.1;Note=SC1F2.16c%2C probable dehydrogenase%2C len: 276 aa%3B similar to many e.g. TR:O24479 (EMBL:U89510) B-keto acyl reductase from Hordeum vulgare (barley) (325 aa)%2C fasta scores%3B opt: 316 z-score: 468.7 E(): 7.2e-19%2C 36.4%25 identity in 214 aa overlap and HETN_ANASP ketoacyl reductase hetN (287 aa)%2C fasta scores%3B opt: 343 z-score: 416.6 E(): 5.8e-16%2C 36.8%25 identity in 220 aa overlap. Contains PS00061 Short-chain dehydrogenases reductases to entry PF00106 adh_short%2C Alcohol /other dehydrogenases%2C short chain type%2C score 166.30%2C E-value 5.1e-46;gbkey=CDS;gene=SC1F2.16c;product=dehydrogenase;protein_id=NP_630696.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7340238	7340795	.	-	.	ID=id8658;Dbxref=GeneID:1102058;Note=Pfam match to entry PF00106 adh_short%2C Alcohol /other dehydrogenases%2C short chain type%2C score 166.30%2C E-value 5.1e-46;gbkey=misc_feature;gene=SC1F2.16c
NC_003888.3	RefSeq	sequence_feature	7340301	7340387	.	-	.	ID=id8659;Dbxref=GeneID:1102058;Note=PS00061 Short-chain dehydrogenases reductases;gbkey=misc_feature;gene=SC1F2.16c
NC_003888.3	RefSeq	ribosome_entry_site	7340823	7340826	.	-	.	ID=id8660;Note=possible RBS upstream of SC1F2.16c;gbkey=RBS
NC_003888.3	RefSeq	gene	7340945	7341376	.	+	.	ID=gene6681;Dbxref=GeneID:1102059;Name=SC1F2.17;gbkey=Gene;gene=SC1F2.17;gene_biotype=protein_coding;gene_synonym=SC1F2.17;locus_tag=SCO6620
NC_003888.3	RefSeq	CDS	7340945	7341376	.	+	0	ID=cds6554;Parent=gene6681;Dbxref=Genbank:NP_630697.1,GeneID:1102059;Name=NP_630697.1;Note=SC1F2.17%2C hypothetical protei%2C len: 143 aa%3B similar to hypothetical proteins e.g. M. tuberculosis TR:P71885 (EMBL:Z79702) MTCY3G12.07C (163 aa)%2C fasta scores%3B opt: 171 z-score: 244.4 E(): 2.3e-06%2C 36.0%25 identity in 114 aa overlap;gbkey=CDS;gene=SC1F2.17;product=hypothetical protein;protein_id=NP_630697.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7341409	7341453	.	+	.	ID=id8661;Note=5 x 9bp degenerate repeats;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	7341620	7341625	.	+	.	ID=id8662;Note=possible RBS upstream of SC1F2.18;gbkey=RBS
NC_003888.3	RefSeq	gene	7341633	7342907	.	+	.	ID=gene6682;Dbxref=GeneID:1102060;Name=SC1F2.18;gbkey=Gene;gene=SC1F2.18;gene_biotype=protein_coding;gene_synonym=SC1F2.18;locus_tag=SCO6621
NC_003888.3	RefSeq	CDS	7341633	7342907	.	+	0	ID=cds6555;Parent=gene6682;Dbxref=Genbank:NP_630698.1,GeneID:1102060;Name=NP_630698.1;Note=SC1F2.18%2C unknown%2C len: 424 aa%3B some similarity to C-terminus of TR:O54229 (EMBL:AJ223176) Streptomyces granaticolor Ser/Thr protein kinase (780 aa)%2C fasta scores%3B opt: 260 z-score: 221.0 E(): 4.5e-05%2C 27.8%25 identity in 439 aa overlap;gbkey=CDS;gene=SC1F2.18;product=hypothetical protein;protein_id=NP_630698.1;transl_table=11
NC_003888.3	RefSeq	gene	7343142	7345028	.	+	.	ID=gene6683;Dbxref=GeneID:1102061;Name=SC1F2.19;gbkey=Gene;gene=SC1F2.19;gene_biotype=protein_coding;gene_synonym=SC1F2.19;locus_tag=SCO6622
NC_003888.3	RefSeq	CDS	7343142	7345028	.	+	0	ID=cds6556;Parent=gene6683;Dbxref=Genbank:NP_630699.1,GeneID:1102061;Name=NP_630699.1;Note=SC1F2.19%2C probable ATP/GTP binding protein%2C len: 628 aa%3B very weak similarity in C-terminus to a yeast ATP /GTP binding protein TR:Q12179 (EMBL:Z73601) Saccharomyces cerevisiae chromosome XVI ORF YPL245W (454 aa)%2C fasta scores%3B opt: 201 z-score: 198.6 E(): 0.00081%2C 25.2%25 identity in 469 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop) and PS00152 ATP synthase alpha and beta subunits signature. Also similar to downstream gene SC1F2.20%2C E(): 0%2C 37.1%25 identity in 657 aa overlap;gbkey=CDS;gene=SC1F2.19;product=ATP/GTP binding protein;protein_id=NP_630699.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7343940	7343963	.	+	.	ID=id8663;Dbxref=GeneID:1102061;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1F2.19
NC_003888.3	RefSeq	sequence_feature	7344009	7344038	.	+	.	ID=id8664;Dbxref=GeneID:1102061;Note=PS00152 ATP synthase alpha and beta subunits signature;gbkey=misc_feature;gene=SC1F2.19
NC_003888.3	RefSeq	gene	7345061	7347256	.	+	.	ID=gene6684;Dbxref=GeneID:1102062;Name=SC1F2.20;gbkey=Gene;gene=SC1F2.20;gene_biotype=protein_coding;gene_synonym=SC1F2.20;locus_tag=SCO6623
NC_003888.3	RefSeq	CDS	7345061	7347256	.	+	0	ID=cds6557;Parent=gene6684;Dbxref=Genbank:NP_630700.1,GeneID:1102062;Name=NP_630700.1;Note=SC1F2.20%2C probable ATP/GTP binding protein%2C len: 731 aa%3B very weak similarity in C-terminus to a yeast ATP /GTP binding protein TR:Q12179 (EMBL:Z73601) Saccharomyces cerevisiae chromosome XVI ORF YPL245W (454 aa)%2C Smith-Waterman scores%3BE: 3.1e-05%2C 20.4%25 identity in 499 aa overlap. Contains two TTA Leu codons: possible targets for action of bldA%2C PS00017 ATP /GTP-binding site motif A (P-loop) and a possible N-terminal signal sequence. Also similar to upstream gene SC1F2.19%2C E(): 0%2C 37.1%25 identity in 657 aa overlap;gbkey=CDS;gene=SC1F2.20;product=ATP/GTP binding protein;protein_id=NP_630700.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7345157	7345159	.	+	.	ID=id8665;Dbxref=GeneID:1102062;Note=TTA Leu codon: possible target for action of bldA;gbkey=misc_feature;gene=SC1F2.20
NC_003888.3	RefSeq	sequence_feature	7345610	7345612	.	+	.	ID=id8666;Dbxref=GeneID:1102062;Note=TTA Leu codon: possible target for action of bldA;gbkey=misc_feature;gene=SC1F2.20
NC_003888.3	RefSeq	sequence_feature	7346000	7346023	.	+	.	ID=id8667;Dbxref=GeneID:1102062;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1F2.20
NC_003888.3	RefSeq	gene	7347312	7347440	.	-	.	ID=gene6685;Dbxref=GeneID:1102063;Name=SC1F2.21c;gbkey=Gene;gene=SC1F2.21c;gene_biotype=protein_coding;gene_synonym=SC1F2.21c;locus_tag=SCO6624
NC_003888.3	RefSeq	CDS	7347312	7347440	.	-	0	ID=cds6558;Parent=gene6685;Dbxref=Genbank:NP_630701.1,GeneID:1102063;Name=NP_630701.1;Note=SC1F2.21c%2C membrane protein%2C len: 42 aa%3B hydrophobic in C-terminus. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC1F2.21c;product=hypothetical protein;protein_id=NP_630701.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7347450	7347455	.	-	.	ID=id8668;Note=possible RBS upstream of SC1F2.21c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7347647	7347650	.	+	.	ID=id8669;Note=possible RBS upstream of SC1F2.22;gbkey=RBS
NC_003888.3	RefSeq	gene	7347655	7348320	.	+	.	ID=gene6686;Dbxref=GeneID:1102064;Name=SC1F2.22;gbkey=Gene;gene=SC1F2.22;gene_biotype=protein_coding;gene_synonym=SC1F2.22;locus_tag=SCO6625
NC_003888.3	RefSeq	CDS	7347655	7348320	.	+	0	ID=cds6559;Parent=gene6686;Dbxref=Genbank:NP_630702.1,GeneID:1102064;Name=NP_630702.1;Note=SC1F2.22%2C unknown%2C len: 221 aa;gbkey=CDS;gene=SC1F2.22;product=hypothetical protein;protein_id=NP_630702.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7348520	7348524	.	+	.	ID=id8670;Note=possible RBS upstream of SC1F2.23;gbkey=RBS
NC_003888.3	RefSeq	gene	7348537	7353210	.	+	.	ID=gene6687;Dbxref=GeneID:1102065;Name=SC1F2.23;gbkey=Gene;gene=SC1F2.23;gene_biotype=protein_coding;gene_synonym=SC1F2.23;locus_tag=SCO6626
NC_003888.3	RefSeq	CDS	7348537	7353210	.	+	0	ID=cds6560;Parent=gene6687;Dbxref=Genbank:NP_630703.1,GeneID:1102065;Name=NP_630703.1;Note=SC1F2.23%2C unknown%2C len: 1557 aa%3B some simlarity to several protein kinases e.g. ABL_MLVAB tyrosine-protein kinase transforming protein from Abelson murine leukemia virus (746 aa)%2C fasta scores%3B opt: 84 z-score: 234.0 E(): 8.6e-06%2C 24.7%25 identity in 364 aa overlap. Contains PS00107 Protein kinases ATP-binding region signature%2C Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 18.10%2C E-value 0.00062 and possible helix-turn-helix motif at aa 1027-1048 (Score 1753%2C +5.16 SD);gbkey=CDS;gene=SC1F2.23;product=protein kinase;protein_id=NP_630703.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7350124	7350318	.	+	.	ID=id8671;Dbxref=GeneID:1102065;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 18.10%2C E-value 0.00062;gbkey=misc_feature;gene=SC1F2.23
NC_003888.3	RefSeq	sequence_feature	7350142	7350228	.	+	.	ID=id8672;Dbxref=GeneID:1102065;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SC1F2.23
NC_003888.3	RefSeq	ribosome_entry_site	7353196	7353199	.	+	.	ID=id8673;Dbxref=GeneID:1102065;Note=possible RBS upstream of SC1F2.24;gbkey=RBS;gene=SC1F2.23
NC_003888.3	RefSeq	gene	7353207	7356839	.	+	.	ID=gene6688;Dbxref=GeneID:1102066;Name=SC1F2.24;gbkey=Gene;gene=SC1F2.24;gene_biotype=protein_coding;gene_synonym=SC1F2.24,SC4G2.01;locus_tag=SCO6627
NC_003888.3	RefSeq	CDS	7353207	7356839	.	+	0	ID=cds6561;Parent=gene6688;Dbxref=REBASE:ScoA3ORF6627P,Genbank:NP_733709.1,GeneID:1102066;Name=NP_733709.1;Note=SC4G2.01%2C unknown%2C partial CDS%2C len: >378 aa%3B continuation of SC1F2.24~SC1F2.24%2C unknown%2C partial CDS%2C len: >862 aa%3B contains short segment of similarity to a Helicobacter pylori gene described as TR:O26046 (EMBL:AE000649) type IIS restriction enzyme R and M protein (1279 aa)%2C fasta scores%3B opt: 92 z-score: 267.0 E(): 1.3e-07%2C 30.5%25 identity in 118 aa overlap. Also contains PS00092 N-6 Adenine-specific DNA methylases signature and probable coiled-coil from a 5-39. Note that this CDS is relatively more AT rich (approx 60%25 GC) than the genomic average (72%25);gbkey=CDS;gene=SC1F2.24;product=hypothetical protein;protein_id=NP_733709.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7354329	7354349	.	+	.	ID=id8674;Dbxref=GeneID:1102066;Note=PS00092 N-6 Adenine-specific DNA methylases signature;gbkey=misc_feature;gene=SC1F2.24
NC_003888.3	RefSeq	gene	7356766	7357356	.	-	.	ID=gene6689;Dbxref=GeneID:1102067;Name=SC4G2.02c;gbkey=Gene;gene=SC4G2.02c;gene_biotype=protein_coding;gene_synonym=SC4G2.02c;locus_tag=SCO6628
NC_003888.3	RefSeq	CDS	7356766	7357356	.	-	0	ID=cds6562;Parent=gene6689;Dbxref=Genbank:NP_630704.1,GeneID:1102067;Name=NP_630704.1;Note=SC4G2.02c%2C unknown%2C len: 196 aa%3B similar to S. coelicolor TR:Q53897 (EMBL:X60316) abaA gene ORFA (192 aa)%2C fasta scores%3B opt: 245 z-score: 250.4 E(): 1.1e-06%2C 32.9%25 identity in 164 aa overlap. Also similar to SC10A5.20 (32.7%25 identity in 147 aa overlap) and SC7C7.02c (38.7%25 identity in 150 aa overlap) and to TR:Q9RKV5 (EMBL:AL132824) Streptomyces coelicolor regulatory protein SCAH10.02%2C 160 aa%3B fasta scores: opt: 436 Z-score: 526.8 E(): 1e-21%3B 51.449%25 identity in 138 aa overlap;gbkey=CDS;gene=SC4G2.02c;product=hypothetical protein;protein_id=NP_630704.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7357507	7357511	.	+	.	ID=id8675;Note=possible RBS upsteam of SC4G2.03;gbkey=RBS
NC_003888.3	RefSeq	gene	7357519	7358352	.	+	.	ID=gene6690;Dbxref=GeneID:1102068;Name=SC4G2.03;gbkey=Gene;gene=SC4G2.03;gene_biotype=protein_coding;gene_synonym=SC4G2.03;locus_tag=SCO6629
NC_003888.3	RefSeq	CDS	7357519	7358352	.	+	0	ID=cds6563;Parent=gene6690;Dbxref=Genbank:NP_630705.1,GeneID:1102068;Name=NP_630705.1;Note=SC4G2.03%2C hypothetical protein%2C len: 277 aa%3B similar to TR:Q9F345 (EMBL:AL391751) Streptomyces coelicolor hypothetical protein SC9E12.10c%2C 287 aa%3B fasta scores: opt: 769 Z-score: 890.8 E(): 5.5e-42%3B 48.736%25 identity in 277 aa overlap;gbkey=CDS;gene=SC4G2.03;product=hypothetical protein;protein_id=NP_630705.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7358341	7358344	.	+	.	ID=id8676;Dbxref=GeneID:1102068;Note=possible RBS upstream of SC4G2.04;gbkey=RBS;gene=SC4G2.03
NC_003888.3	RefSeq	gene	7358349	7358552	.	+	.	ID=gene6691;Dbxref=GeneID:1102069;Name=SC4G2.04;gbkey=Gene;gene=SC4G2.04;gene_biotype=protein_coding;gene_synonym=SC4G2.04;locus_tag=SCO6630
NC_003888.3	RefSeq	CDS	7358349	7358552	.	+	0	ID=cds6564;Parent=gene6691;Dbxref=Genbank:NP_630706.1,GeneID:1102069;Name=NP_630706.1;Note=SC4G2.04%2C unknown%2C len: 67 aa%3B similar to S. coelicolor TR:Q53896 (EMBL:X60316) AbaA gene ORFD (75 aa)%2C fasta scores%3B opt: 120 z-score: 206.5 E(): 0.00029%2C 43.8%25 identity in 48 aa overlap;gbkey=CDS;gene=SC4G2.04;product=hypothetical protein;protein_id=NP_630706.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7358569	7358612	.	+	.	ID=id8677;Note=hairpin loop with 19 /20 bp stem;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7358814	7359689	.	+	.	ID=gene6692;Dbxref=GeneID:1102070;Name=SC4G2.05;gbkey=Gene;gene=SC4G2.05;gene_biotype=protein_coding;gene_synonym=SC4G2.05;locus_tag=SCO6631
NC_003888.3	RefSeq	CDS	7358814	7359689	.	+	0	ID=cds6565;Parent=gene6692;Dbxref=Genbank:NP_630707.1,GeneID:1102070;Name=NP_630707.1;Note=SC4G2.05%2C membrane protein%2C len: 291 aa%3B similar to TR:AAK74714 (EMBL:AE007366) Streptococcus pneumoniae conserved hypothetical protein SP0558%2C 271 aa%3B fasta scores: opt: 522 Z-score: 580.2 E(): 1.1e-24%3B 37.008%25 identity in 254 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4G2.05;product=hypothetical protein;protein_id=NP_630707.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7359850	7359854	.	+	.	ID=id8678;Note=possible RBS upstream of SC4G2.06;gbkey=RBS
NC_003888.3	RefSeq	gene	7359865	7360494	.	+	.	ID=gene6693;Dbxref=GeneID:1102071;Name=SC4G2.06;gbkey=Gene;gene=SC4G2.06;gene_biotype=protein_coding;gene_synonym=SC4G2.06;locus_tag=SCO6632
NC_003888.3	RefSeq	CDS	7359865	7360494	.	+	0	ID=cds6566;Parent=gene6693;Dbxref=Genbank:NP_630708.1,GeneID:1102071;Name=NP_630708.1;Note=SC4G2.06%2C possible membrane protein%2C len: 149 aa%3B start uncertain;gbkey=CDS;gene=SC4G2.06;product=hypothetical protein;protein_id=NP_630708.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7360487	7360490	.	+	.	ID=id8679;Dbxref=GeneID:1102071;Note=possible RBS upstream of SC4G2.07;gbkey=RBS;gene=SC4G2.06
NC_003888.3	RefSeq	gene	7360499	7362409	.	+	.	ID=gene6694;Dbxref=GeneID:1102072;Name=SC4G2.07;gbkey=Gene;gene=SC4G2.07;gene_biotype=protein_coding;gene_synonym=SC4G2.07;locus_tag=SCO6633
NC_003888.3	RefSeq	CDS	7360499	7362409	.	+	0	ID=cds6567;Parent=gene6694;Dbxref=Genbank:NP_630709.1,GeneID:1102072;Name=NP_630709.1;Note=SC4G2.07%2C possible transcriptional regulator%2C len: 636 aa%3B similar to part of AFSR_STRCO regulatory protein AfsR (993 aa)%2C fasta scores%3B opt: 512 z-score: 733.8 E(): 0%2C 35.5%25 identity in 521 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC4G2.07;product=transcriptional regulator;protein_id=NP_630709.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7360757	7360780	.	+	.	ID=id8680;Dbxref=GeneID:1102072;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4G2.07
NC_003888.3	RefSeq	sequence_feature	7362314	7371774	.	+	.	ID=id8681;Note=99.8%25 match to SCPGLYZ L37531 Streptomyces coelicolor bacteriophage (phiC31) resistance (pglY and pglZ) genes%2C from 1 to 9461;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7362446	7362450	.	+	.	ID=id8682;Note=possible RBS upstream of SC4G2.08;gbkey=RBS
NC_003888.3	RefSeq	gene	7362458	7362646	.	+	.	ID=gene6695;Dbxref=GeneID:1102073;Name=SC4G2.08;gbkey=Gene;gene=SC4G2.08;gene_biotype=protein_coding;gene_synonym=SC4G2.08;locus_tag=SCO6634
NC_003888.3	RefSeq	CDS	7362458	7362646	.	+	0	ID=cds6568;Parent=gene6695;Dbxref=Genbank:NP_630710.1,GeneID:1102073;Name=NP_630710.1;Note=SC4G2.08%2C unknown%2C len: 62 aa;gbkey=CDS;gene=SC4G2.08;product=hypothetical protein;protein_id=NP_630710.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7362926	7362929	.	+	.	ID=id8683;Note=possible RBS upstream of pglY;gbkey=RBS
NC_003888.3	RefSeq	gene	7362943	7366827	.	+	.	ID=gene6696;Dbxref=GeneID:1102074;Name=pglY;gbkey=Gene;gene=pglY;gene_biotype=protein_coding;gene_synonym=pglY,SC4G2.09;locus_tag=SCO6635
NC_003888.3	RefSeq	CDS	7362943	7366827	.	+	0	ID=cds6569;Parent=gene6696;Dbxref=Genbank:NP_630711.1,GeneID:1102074;Name=NP_630711.1;Note=SC4G2.09%2C pglY%2C len: 1294 aa%3B 99.8%25 identical to S. coelicolor TR:Q53942 (EMBL:L37531) bacteriophage (phiC31) resistance gene pglY (1294 aa). Contains PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=CDS;gene=pglY;product=bacteriophage resistance gene pglY;protein_id=NP_630711.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7363165	7363188	.	+	.	ID=id8684;Dbxref=GeneID:1102074;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=pglY
NC_003888.3	RefSeq	gene	7366824	7369748	.	+	.	ID=gene6697;Dbxref=GeneID:1102075;Name=pglZ;gbkey=Gene;gene=pglZ;gene_biotype=protein_coding;gene_synonym=pglZ,SC4G2.10;locus_tag=SCO6636
NC_003888.3	RefSeq	CDS	7366824	7369748	.	+	0	ID=cds6570;Parent=gene6697;Dbxref=Genbank:NP_630712.1,GeneID:1102075;Name=NP_630712.1;Note=SC4G2.10%2C pglZ%2C len: 974 aa%3B 98.9%25 identical to S. coelicolor TR:Q53943 (EMBL:L37531) bacteriophage (phiC31) resistance gene pglZ (974 aa).;gbkey=CDS;gene=pglZ;product=bacteriophage resistance gene pglZ;protein_id=NP_630712.1;transl_table=11
NC_003888.3	RefSeq	gene	7369817	7370869	.	-	.	ID=gene6698;Dbxref=GeneID:1102076;Name=SC4G2.11c;gbkey=Gene;gene=SC4G2.11c;gene_biotype=protein_coding;gene_synonym=SC4G2.11c;locus_tag=SCO6637
NC_003888.3	RefSeq	CDS	7369817	7370869	.	-	0	ID=cds6571;Parent=gene6698;Dbxref=Genbank:NP_630713.1,GeneID:1102076;Name=NP_630713.1;Note=SC4G2.11c%2C unknown%2C len: 350 aa%3B identical to TR:Q53944 (EMBL:L37531) ORF3 downstream of PglZ (350 aa);gbkey=CDS;gene=SC4G2.11c;product=hypothetical protein;protein_id=NP_630713.1;transl_table=11
NC_003888.3	RefSeq	gene	7370866	7372683	.	-	.	ID=gene6699;Dbxref=GeneID:1102077;Name=SC4G2.12c;gbkey=Gene;gene=SC4G2.12c;gene_biotype=protein_coding;gene_synonym=SC4G2.12c;locus_tag=SCO6638
NC_003888.3	RefSeq	CDS	7370866	7372683	.	-	0	ID=cds6572;Parent=gene6699;Dbxref=Genbank:NP_630714.1,GeneID:1102077;Name=NP_630714.1;Note=SC4G2.12c%2C unknown%2C len: 605 aa%3B identical to partial S. coelicolor sequence TR:Q53945 (EMBL:L37531) ORF4 downstream of PglZ (>302 aa) and weakly similar to Y686_METJA hypothetical protein MJ0686 (Methanococcus jannaschii) (580 aa)%2C fasta scores%3B opt: 260 z-score: 416.1 E(): 6.2e-16%2C 23.3%25 identity in 601 aa overlap. Contains TTA Leu codon%3B possible target for action of bldA;gbkey=CDS;gene=SC4G2.12c;product=hypothetical protein;protein_id=NP_630714.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7370880	7370884	.	-	.	ID=id8685;Dbxref=GeneID:1102077;Note=possible RBS upstream of SC4G2.11c;gbkey=RBS;gene=SC4G2.12c
NC_003888.3	RefSeq	sequence_feature	7372621	7372623	.	-	.	ID=id8686;Dbxref=GeneID:1102077;Note=TTA Leu codon%3B possible target for action of bldA;gbkey=misc_feature;gene=SC4G2.12c
NC_003888.3	RefSeq	ribosome_entry_site	7372688	7372691	.	-	.	ID=id8687;Note=possible RBS upstream of SC4G2.12c;gbkey=RBS
NC_003888.3	RefSeq	gene	7372859	7374208	.	+	.	ID=gene6700;Dbxref=GeneID:1102078;Name=SC4G2.13;gbkey=Gene;gene=SC4G2.13;gene_biotype=protein_coding;gene_synonym=SC4G2.13;locus_tag=SCO6639
NC_003888.3	RefSeq	CDS	7372859	7374208	.	+	0	ID=cds6573;Parent=gene6700;Dbxref=Genbank:NP_630715.1,GeneID:1102078;Name=NP_630715.1;Note=SC4G2.13%2C probable ATP/GTP binding protein%2C len: 449 aa%3B similar to TR:O26411 (EMBL:AE000816) hypothetical protein MTH311 (Methanobacterium thermoautotrophicum) (411 aa)%2C fasta scores%3B opt: 596 z-score: 528.7 E(): 3.3e-22%2C 30.5%25 identity in 393 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC4G2.13;product=ATP/GTP binding protein;protein_id=NP_630715.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7373057	7373080	.	+	.	ID=id8688;Dbxref=GeneID:1102078;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4G2.13
NC_003888.3	RefSeq	ribosome_entry_site	7374199	7374202	.	+	.	ID=id8689;Dbxref=GeneID:1102078;Note=possible RBS upstream of SC4G2.14;gbkey=RBS;gene=SC4G2.13
NC_003888.3	RefSeq	gene	7374208	7376403	.	+	.	ID=gene6701;Dbxref=GeneID:1102079;Name=SC4G2.14;gbkey=Gene;gene=SC4G2.14;gene_biotype=protein_coding;gene_synonym=SC4G2.14;locus_tag=SCO6640
NC_003888.3	RefSeq	CDS	7374208	7376403	.	+	0	ID=cds6574;Parent=gene6701;Dbxref=Genbank:NP_630716.1,GeneID:1102079;Name=NP_630716.1;Note=SC4G2.14%2C probable ATP-dependent helicase%2C len: 731 aa%3B similar to many predicted helicases e.g. C-terminuis of LHR_ECOLI probable ATP-dependent helicase LHR (1538 aa)%2C fasta scores%3B opt: 332 z-score: 570.0 E(): 1.7e-24%2C 29.3%25 identity in 638 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop). Contains Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain;gbkey=CDS;gene=SC4G2.14;product=ATP-dependent helicase;protein_id=NP_630716.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7374376	7374399	.	+	.	ID=id8690;Dbxref=GeneID:1102079;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4G2.14
NC_003888.3	RefSeq	sequence_feature	7375084	7375329	.	+	.	ID=id8691;Dbxref=GeneID:1102079;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain;gbkey=misc_feature;gene=SC4G2.14
NC_003888.3	RefSeq	gene	7376413	7377627	.	-	.	ID=gene6702;Dbxref=GeneID:1102080;Name=SC4G2.15c;gbkey=Gene;gene=SC4G2.15c;gene_biotype=protein_coding;gene_synonym=SC4G2.15c;locus_tag=SCO6641
NC_003888.3	RefSeq	CDS	7376413	7377627	.	-	0	ID=cds6575;Parent=gene6702;Dbxref=Genbank:NP_630717.1,GeneID:1102080;Name=NP_630717.1;Note=SC4G2.15c%2C unknown%2C len: 404 aa%3B N-terminus is similar to extreme C-terminus of TR:O26587 (EMBL:AE000832) DNA helicase related protein MTH487 (Methanobacterium thermoautotrophicum) (1157 aa)%2C fasta scores%3B opt: 467 z-score: 553.7 E(): 1.3e-23%2C 43.7%25 identity in 174 aa overlap;gbkey=CDS;gene=SC4G2.15c;product=hypothetical protein;protein_id=NP_630717.1;transl_table=11
NC_003888.3	RefSeq	gene	7377777	7378070	.	-	.	ID=gene6703;Dbxref=GeneID:1102081;Name=SC4G2.16c;gbkey=Gene;gene=SC4G2.16c;gene_biotype=protein_coding;gene_synonym=SC4G2.16c;locus_tag=SCO6642
NC_003888.3	RefSeq	CDS	7377777	7378070	.	-	0	ID=cds6576;Parent=gene6703;Dbxref=Genbank:NP_630718.1,GeneID:1102081;Name=NP_630718.1;Note=SC4G2.16c%2C questionable ORF%2C len: 97 aa;gbkey=CDS;gene=SC4G2.16c;product=hypothetical protein;protein_id=NP_630718.1;transl_table=11
NC_003888.3	RefSeq	gene	7378334	7378888	.	+	.	ID=gene6704;Dbxref=GeneID:1102082;Name=SC4G2.17;gbkey=Gene;gene=SC4G2.17;gene_biotype=protein_coding;gene_synonym=SC4G2.17;locus_tag=SCO6643
NC_003888.3	RefSeq	CDS	7378334	7378888	.	+	0	ID=cds6577;Parent=gene6704;Dbxref=Genbank:NP_630719.1,GeneID:1102082;Name=NP_630719.1;Note=SC4G2.17%2C unknown%2C len: 184 aa%3B some similarity to TR:O26772 (EMBL:AE000847) hypothetical protein MTH676 (Methanobacterium thermoautotrophicum) (205 aa)%2C fasta scores%3B opt: 260 z-score: 193.2 E(): 0.0016%2C 33.1%25 identity in 163 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 38.50%2C E-value 1.5e-07;gbkey=CDS;gene=SC4G2.17;product=hypothetical protein;protein_id=NP_630719.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7378355	7378801	.	+	.	ID=id8692;Dbxref=GeneID:1102082;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 38.50%2C E-value 1.5e-07;gbkey=misc_feature;gene=SC4G2.17
NC_003888.3	RefSeq	ribosome_entry_site	7378990	7378993	.	+	.	ID=id8693;Note=possible RBS upstream of SC4G2.18;gbkey=RBS
NC_003888.3	RefSeq	gene	7378997	7380508	.	+	.	ID=gene6705;Dbxref=GeneID:1102083;Name=SC4G2.18;gbkey=Gene;gene=SC4G2.18;gene_biotype=protein_coding;gene_synonym=SC4G2.18;locus_tag=SCO6644
NC_003888.3	RefSeq	CDS	7378997	7380508	.	+	0	ID=cds6578;Parent=gene6705;Dbxref=Genbank:NP_630720.1,GeneID:1102083;Name=NP_630720.1;Note=SC4G2.18%2C probable solute-binding lipoprotein%2C len: 503 aa%3B similar to many members of the bacterial extracellular solute-binding protein family 5YLIB_ECOLI binding protein YLIB precursor (512 aa)%2C fasta scores%3B opt: 364 z-score: 328.6 E(): 4.6e-11%2C 27.8%25 identity in 467 aa overlap. Contains N-terminal signal sequence with appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site and Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 36.60%2C E-value 2.2e-08;gbkey=CDS;gene=SC4G2.18;product=solute-binding lipoprotein;protein_id=NP_630720.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7379030	7379062	.	+	.	ID=id8694;Dbxref=GeneID:1102083;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4G2.18
NC_003888.3	RefSeq	sequence_feature	7379216	7379353	.	+	.	ID=id8695;Dbxref=GeneID:1102083;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 36.60%2C E-value 2.2e-08;gbkey=misc_feature;gene=SC4G2.18
NC_003888.3	RefSeq	gene	7380512	7382317	.	+	.	ID=gene6706;Dbxref=GeneID:1102084;Name=SC4G2.19;gbkey=Gene;gene=SC4G2.19;gene_biotype=protein_coding;gene_synonym=SC4G2.19;locus_tag=SCO6645
NC_003888.3	RefSeq	CDS	7380512	7382317	.	+	0	ID=cds6579;Parent=gene6706;Dbxref=Genbank:NP_630721.1,GeneID:1102084;Name=NP_630721.1;Note=SC4G2.19%2C probable transport system permease%2C len: 601 aa%3B similar to many members of the oppBC family e.g. NIKB_ECOLI nickel transport system permease (314 aa)%2C fasta scores%3B opt: 405 z-score: 322.1 E(): 1.1e-10%2C 33.4%25 identity in 290 aa overlap;gbkey=CDS;gene=SC4G2.19;product=transport system permease;protein_id=NP_630721.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7382306	7382309	.	+	.	ID=id8696;Dbxref=GeneID:1102084;Note=possible RBS upstream of SC4G2.20;gbkey=RBS;gene=SC4G2.19
NC_003888.3	RefSeq	gene	7382319	7383629	.	+	.	ID=gene6707;Dbxref=GeneID:1102085;Name=SC4G2.20;gbkey=Gene;gene=SC4G2.20;gene_biotype=protein_coding;gene_synonym=SC4G2.20;locus_tag=SCO6646
NC_003888.3	RefSeq	CDS	7382319	7383629	.	+	0	ID=cds6580;Parent=gene6707;Dbxref=Genbank:NP_630722.1,GeneID:1102085;Name=NP_630722.1;Note=SC4G2.20%2C probable transport system permease%2C len: 436 aa%3B similar to e.g. M. tuberculosis TR:O53861 (EMBL:AL022004) membrane transport protein MTV043.42 (419 aa)%2C fasta scores%3B opt: 771 z-score: 629.6 E(): 8e-28%2C 37.6%25 identity in 396 aa overlap;gbkey=CDS;gene=SC4G2.20;product=transport system permease;protein_id=NP_630722.1;transl_table=11
NC_003888.3	RefSeq	gene	7383632	7384426	.	-	.	ID=gene6708;Dbxref=GeneID:1102086;Name=SC4G2.21c;gbkey=Gene;gene=SC4G2.21c;gene_biotype=protein_coding;gene_synonym=SC4G2.21c;locus_tag=SCO6647
NC_003888.3	RefSeq	CDS	7383632	7384426	.	-	0	ID=cds6581;Parent=gene6708;Dbxref=Genbank:NP_630723.1,GeneID:1102086;Name=NP_630723.1;Note=SC4G2.21c%2C possible integral membrane protein%2C len: 264 aa%3B similar to a hypothetical protein from Rhodobacter sphaeroides TR:O54078 (EMBL:AJ002398) (227 aa)%2C fasta scores%3B opt: 493 z-score: 616.8 E(): 4.1e-27%2C 43.6%25 identity in 220 aa overlap. Also very weak similarity to PGSA_PSEFL (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase) (195 aa) E:0.0018%2C 30.8%25 identity in 146 aa overlap. Contains PS00379 CDP-alcohol phosphatidyltransferases signature;gbkey=CDS;gene=SC4G2.21c;product=hypothetical protein;protein_id=NP_630723.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7383980	7384048	.	-	.	ID=id8697;Dbxref=GeneID:1102086;Note=PS00379 CDP-alcohol phosphatidyltransferases signature;gbkey=misc_feature;gene=SC4G2.21c
NC_003888.3	RefSeq	ribosome_entry_site	7384434	7384438	.	-	.	ID=id8698;Note=possible RBS upstream of SC4G2.21c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7384523	7384528	.	+	.	ID=id8699;Note=possible RBS upstream of SC4G2.22;gbkey=RBS
NC_003888.3	RefSeq	gene	7384536	7384874	.	+	.	ID=gene6709;Dbxref=GeneID:1102087;Name=SC4G2.22;gbkey=Gene;gene=SC4G2.22;gene_biotype=protein_coding;gene_synonym=SC4G2.22;locus_tag=SCO6648
NC_003888.3	RefSeq	CDS	7384536	7384874	.	+	0	ID=cds6582;Parent=gene6709;Dbxref=Genbank:NP_630724.1,GeneID:1102087;Name=NP_630724.1;Note=SC4G2.22%2C unknown%2C len: 112 aa;gbkey=CDS;gene=SC4G2.22;product=hypothetical protein;protein_id=NP_630724.1;transl_table=11
NC_003888.3	RefSeq	gene	7384871	7385545	.	+	.	ID=gene6710;Dbxref=GeneID:1102088;Name=SC4G2.23;gbkey=Gene;gene=SC4G2.23;gene_biotype=protein_coding;gene_synonym=SC4G2.23;locus_tag=SCO6649
NC_003888.3	RefSeq	CDS	7384871	7385545	.	+	0	ID=cds6583;Parent=gene6710;Dbxref=Genbank:NP_630725.1,GeneID:1102088;Name=NP_630725.1;Note=SC4G2.23%2C unknown%2C len: 224 aa;gbkey=CDS;gene=SC4G2.23;product=hypothetical protein;protein_id=NP_630725.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7385647	7385651	.	+	.	ID=id8700;Note=possible RBS upstream of SC4G2.24;gbkey=RBS
NC_003888.3	RefSeq	gene	7385660	7386058	.	+	.	ID=gene6711;Dbxref=GeneID:1102089;Name=SC4G2.24;gbkey=Gene;gene=SC4G2.24;gene_biotype=protein_coding;gene_synonym=SC4G2.24;locus_tag=SCO6650
NC_003888.3	RefSeq	CDS	7385660	7386058	.	+	0	ID=cds6584;Parent=gene6711;Dbxref=Genbank:NP_630726.1,GeneID:1102089;Name=NP_630726.1;Note=SC4G2.24%2C unknown%2C len: 132 aa;gbkey=CDS;gene=SC4G2.24;product=hypothetical protein;protein_id=NP_630726.1;transl_table=11
NC_003888.3	RefSeq	gene	7386055	7387293	.	+	.	ID=gene6712;Dbxref=GeneID:1102090;Name=SC4G2.25;gbkey=Gene;gene=SC4G2.25;gene_biotype=protein_coding;gene_synonym=SC4G2.25,SC5A7.01;locus_tag=SCO6651
NC_003888.3	RefSeq	CDS	7386055	7387293	.	+	0	ID=cds6585;Parent=gene6712;Dbxref=Genbank:NP_733710.1,GeneID:1102090;Name=NP_733710.1;Note=SC5A7.01%2C possible glycosyl transferase%2C partial CDS%2C len: >368 aa%3B similar to several hypothetical proteins e.g. YV12_MYCTU MTCY20G9.12 (480 aa)%2C fasta sores%3B opt: 237 z-score: 252.3 E(): 8.1e-07%2C 29.9%25 identity in 278 aa overlap%2C and to WCAL_ECOLI colanic acid biosynthesis glycosyl transferase (406 aa)%2C fasta sores%3B opt: 187 z-score: 194.8 E(): 0.0013%2C 27.8%25 identity in 237 aa overlap. Contains Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 52.90%2C E-value 5.5e-14~SC4G2.25%2C possible glycosyl transferase%2C partial CDS%2C len: >78 aa%3B overlaps and extends glycosyl transferase SC5A7.01;gbkey=CDS;gene=SC4G2.25;product=glycosyl transferase;protein_id=NP_733710.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7386844	7387203	.	+	.	ID=id8701;Dbxref=GeneID:1102090;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 52.90%2C E-value 5.5e-14;gbkey=misc_feature;gene=SC4G2.25
NC_003888.3	RefSeq	ribosome_entry_site	7387279	7387284	.	+	.	ID=id8702;Dbxref=GeneID:1102090;Note=possible RBS upstream of SC5A7.02;gbkey=RBS;gene=SC4G2.25
NC_003888.3	RefSeq	gene	7387290	7388675	.	+	.	ID=gene6713;Dbxref=GeneID:1102091;Name=SC5A7.02;gbkey=Gene;gene=SC5A7.02;gene_biotype=protein_coding;gene_synonym=SC5A7.02;locus_tag=SCO6652
NC_003888.3	RefSeq	CDS	7387290	7388675	.	+	0	ID=cds6586;Parent=gene6713;Dbxref=Genbank:NP_630727.1,GeneID:1102091;Name=NP_630727.1;Note=SC5A7.02%2C unknown%2C len: 461 aa%3B contains 6 degenerate repeats of P(AT)ESAVPA;gbkey=CDS;gene=SC5A7.02;product=hypothetical protein;protein_id=NP_630727.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7387314	7387457	.	+	.	ID=id8703;Dbxref=GeneID:1102091;Note=6x 24 bp repeats;gbkey=repeat_region;gene=SC5A7.02
NC_003888.3	RefSeq	ribosome_entry_site	7388661	7388665	.	+	.	ID=id8704;Dbxref=GeneID:1102091;Note=possible RBS upstream of SC5A7.03;gbkey=RBS;gene=SC5A7.02
NC_003888.3	RefSeq	gene	7388672	7389874	.	+	.	ID=gene6714;Dbxref=GeneID:1102092;Name=SC5A7.03;gbkey=Gene;gene=SC5A7.03;gene_biotype=protein_coding;gene_synonym=SC5A7.03;locus_tag=SCO6653
NC_003888.3	RefSeq	CDS	7388672	7389874	.	+	0	ID=cds6587;Parent=gene6714;Dbxref=Genbank:NP_630728.1,GeneID:1102092;Name=NP_630728.1;Note=SC5A7.03%2C probable integral membrane protein%2C len: 400 aa. Note 63 aa overlap with convergent downstream ORF. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5A7.03;product=hypothetical protein;protein_id=NP_630728.1;transl_table=11
NC_003888.3	RefSeq	gene	7389679	7390500	.	-	.	ID=gene6715;Dbxref=GeneID:1102093;Name=SC5A7.04c;gbkey=Gene;gene=SC5A7.04c;gene_biotype=protein_coding;gene_synonym=SC5A7.04c;locus_tag=SCO6654
NC_003888.3	RefSeq	CDS	7389679	7390500	.	-	0	ID=cds6588;Parent=gene6715;Dbxref=Genbank:NP_630729.1,GeneID:1102093;Name=NP_630729.1;Note=SC5A7.04c%2C unknown%2C len: 273 aa%3B some similarity to hypothetical proteins and to Pseudomonas TR:Q52548 (EMBL:D45424) creatinine amidohydrolase (259 aa)%2C fasta sores%3B opt: 193 z-score: 273.1 E(): 5.6e-08 27.3%25 identity in 238 aa overlap. Note 63 aa overlap with convergent downstream ORF;gbkey=CDS;gene=SC5A7.04c;product=hypothetical protein;protein_id=NP_630729.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7390520	7390523	.	+	.	ID=id8705;Note=possible RBS upstream of SC5A7.05;gbkey=RBS
NC_003888.3	RefSeq	gene	7390536	7391201	.	+	.	ID=gene6716;Dbxref=GeneID:1102094;Name=ribA2;gbkey=Gene;gene=ribA2;gene_biotype=protein_coding;gene_synonym=ribA2,SC5A7.05;locus_tag=SCO6655
NC_003888.3	RefSeq	CDS	7390536	7391201	.	+	0	ID=cds6589;Parent=gene6716;Dbxref=Genbank:NP_630730.1,GeneID:1102094;Name=NP_630730.1;Note=SC5A7.05%2C ribA2%2C GTP cyclohydrolase II%2C len: 221 aa%3B highly similar to the C-terminus of many RibA genes where the GTP cyclohydrolase activity is%2C e.g. GCH2_BACSU GTP cyclohydrolase II (EC 3.5.4.25) (398 aa)%2C fasta sores%3B opt: 656 z-score: 960.9 E(): 0%2C 53.1%25 identity in 196 aa overlap and to SW:GCH2_ARATH (EMBL:D45165) Arabidopsis thaliana GTP cyclohydrolase II (EC 3.5.4.25) 245 aa%3B fasta scores: opt: 656 Z-score: 760.1 E(): 1.1e-34%3B 51.832%25 identity in 191 aa overlap;gbkey=CDS;gene=ribA2;product=GTP cyclohydrolase II;protein_id=NP_630730.1;transl_table=11
NC_003888.3	RefSeq	gene	7391232	7392461	.	-	.	ID=gene6717;Dbxref=GeneID:1102095;Name=SC5A7.06c;gbkey=Gene;gene=SC5A7.06c;gene_biotype=protein_coding;gene_synonym=SC5A7.06c;locus_tag=SCO6656
NC_003888.3	RefSeq	CDS	7391232	7392461	.	-	0	ID=cds6590;Parent=gene6717;Dbxref=Genbank:NP_630731.1,GeneID:1102095;Name=NP_630731.1;Note=SC5A7.06c%2C unknown%2C len: 409 aa%3B similar to several hypothetical protein e.g. Y07V_MYCTU MTCY02B10.31C (377 aa)%2C fasta sores%3B opt: 675 z-score: 725.7 E(): 3.5e-33%2C 40.9%25 identity in 340 aa overlap%2C and more distantly to several penicillin binding proteins e.g. PBPE_BACSU penicillin-binding protein 4* (451 aa)%2C fasta sores%3B opt: 148 z-score: 268.0 E(): 1.1e-07%2C 24.9%25 identity in 350 aa overlap;gbkey=CDS;gene=SC5A7.06c;product=hypothetical protein;protein_id=NP_630731.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7392472	7392477	.	-	.	ID=id8706;Note=possible RBS upstream of SC5A7.06c;gbkey=RBS
NC_003888.3	RefSeq	gene	7392553	7394136	.	-	.	ID=gene6718;Dbxref=GeneID:1102096;Name=SC5A7.07c;gbkey=Gene;gene=SC5A7.07c;gene_biotype=protein_coding;gene_synonym=SC5A7.07c;locus_tag=SCO6657
NC_003888.3	RefSeq	CDS	7392553	7394136	.	-	0	ID=cds6591;Parent=gene6718;Dbxref=Genbank:NP_630732.1,GeneID:1102096;Name=NP_630732.1;Note=SC5A7.07c%2C membrane protein%2C len: 527 aa%3B similar to two consecutive genes downstream of HISX_STRCO S. colelicolor histidinol dehydrogenase%3B TR:Q53931 and TR:Q53930%2C fasta scores%3B E(): 1.4e-07%2C 34.3%25 identity in 213 aa overlap and E(): 1.1e-06%2C 32.3%25 identity in 223 aa overlap. Contains possible hydrophobic membrane spanning region at C-terminal domain;gbkey=CDS;gene=SC5A7.07c;product=hypothetical protein;protein_id=NP_630732.1;transl_table=11
NC_003888.3	RefSeq	gene	7394148	7395029	.	-	.	ID=gene6719;Dbxref=GeneID:1102097;Name=SC5A7.08c;gbkey=Gene;gene=SC5A7.08c;gene_biotype=protein_coding;gene_synonym=SC5A7.08c;locus_tag=SCO6658
NC_003888.3	RefSeq	CDS	7394148	7395029	.	-	0	ID=cds6592;Parent=gene6719;Dbxref=Genbank:NP_630733.1,GeneID:1102097;Name=NP_630733.1;Note=similar to full-length Gnd%2C these proteins seems to have a truncated C-terminal 6PGD domainin%3B in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate;gbkey=CDS;gene=SC5A7.08c;product=6-phosphogluconate dehydrogenase;protein_id=NP_630733.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7394235	7394912	.	-	.	ID=id8707;Dbxref=GeneID:1102097;Note=Pfam match to entry PF00393 6PGD%2C 6-phosphogluconate dehydrogenases%2C score 169.20%2C E-value 6.9e-47;gbkey=misc_feature;gene=SC5A7.08c
NC_003888.3	RefSeq	sequence_feature	7394940	7395023	.	-	.	ID=id8708;Dbxref=GeneID:1102097;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature;gbkey=misc_feature;gene=SC5A7.08c
NC_003888.3	RefSeq	gene	7395031	7396683	.	-	.	ID=gene6720;Dbxref=GeneID:1102098;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;gene_synonym=SC5A7.09c;locus_tag=SCO6659
NC_003888.3	RefSeq	CDS	7395031	7396683	.	-	0	ID=cds6593;Parent=gene6720;Dbxref=Genbank:NP_630734.1,GeneID:1102098;Name=NP_630734.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=NP_630734.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7395041	7395045	.	-	.	ID=id8709;Dbxref=GeneID:1102098;Note=possible RBS upstream of SC5A7.08c;gbkey=RBS;gene=pgi
NC_003888.3	RefSeq	sequence_feature	7395064	7396527	.	-	.	ID=id8710;Dbxref=GeneID:1102098;Note=Pfam match to entry PF00342 PGI%2C Phosphoglucose isomerase%2C score 897.30%2C E-value 4.4e-266;gbkey=misc_feature;gene=pgi
NC_003888.3	RefSeq	sequence_feature	7395145	7395198	.	-	.	ID=id8711;Dbxref=GeneID:1102098;Note=PS00174 Phosphoglucose isomerase signature 2;gbkey=misc_feature;gene=pgi
NC_003888.3	RefSeq	gene	7396676	7397611	.	-	.	ID=gene6721;Dbxref=GeneID:1102099;Name=SC5A7.10c;gbkey=Gene;gene=SC5A7.10c;gene_biotype=protein_coding;gene_synonym=SC5A7.10c;locus_tag=SCO6660
NC_003888.3	RefSeq	CDS	7396676	7397611	.	-	0	ID=cds6594;Parent=gene6721;Dbxref=Genbank:NP_630735.1,GeneID:1102099;Name=NP_630735.1;Note=SC5A7.10c%2C unknown%2C len: 311 aa%3B similar to a hypothetical protein from M. tuberculosis TR:O06813 (EMBL:Z95844) MTCY493.08 (303 aa)%2C fasta scores%3B opt: 847 z-score: 1016.2 E(): 0%2C 47.7%25 identity in 304 aa overlap. Also some similarity to OPCA_SYNP7 oxpp cycle protein OpCA (which may be involved in functional assembly of glucose 6-phosphate dehydrogenase) (444 aa)%2C fasta scores%3B opt: 149 z-score: 218.9 E(): 5.9e-05%2C 32.4%25 identity in 142 aa overlap. Note that both of these proteins are downstream of glucose-6-phosphate dehydrogenase genes;gbkey=CDS;gene=SC5A7.10c;product=hypothetical protein;protein_id=NP_630735.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7396694	7396699	.	-	.	ID=id8712;Dbxref=GeneID:1102099;Note=possible RBS upstream of pgi;gbkey=RBS;gene=SC5A7.10c
NC_003888.3	RefSeq	gene	7397608	7399386	.	-	.	ID=gene6722;Dbxref=GeneID:1102100;Name=SC5A7.11c;gbkey=Gene;gene=SC5A7.11c;gene_biotype=protein_coding;gene_synonym=SC5A7.11c,zwf;locus_tag=SCO6661
NC_003888.3	RefSeq	CDS	7397608	7399386	.	-	0	ID=cds6595;Parent=gene6722;Dbxref=Genbank:NP_630736.1,GeneID:1102100;Name=NP_630736.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;gene=SC5A7.11c;product=glucose-6-phosphate 1-dehydrogenase;protein_id=NP_630736.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7397662	7399059	.	-	.	ID=id8713;Dbxref=GeneID:1102100;Note=Pfam match to entry PF00479 G6PD%2C Glucose-6-phosphate dehydrogenase%2C score 730.30%2C E-value 1.1e-236;gbkey=misc_feature;gene=SC5A7.11c
NC_003888.3	RefSeq	sequence_feature	7398520	7398540	.	-	.	ID=id8714;Dbxref=GeneID:1102100;Note=PS00069 Glucose-6-phosphate dehydrogenase active site;gbkey=misc_feature;gene=SC5A7.11c
NC_003888.3	RefSeq	gene	7399383	7400528	.	-	.	ID=gene6723;Dbxref=GeneID:1102101;Name=tal1;gbkey=Gene;gene=tal1;gene_biotype=protein_coding;gene_synonym=tal1;locus_tag=SCO6662
NC_003888.3	RefSeq	CDS	7399383	7400528	.	-	0	ID=cds6596;Parent=gene6723;Dbxref=Genbank:NP_630737.1,GeneID:1102101;Name=NP_630737.1;Note=catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=tal1;product=transaldolase;protein_id=NP_630737.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7399397	7399400	.	-	.	ID=id8715;Dbxref=GeneID:1102101;Note=possible RBS upstream of zwf;gbkey=RBS;gene=tal1
NC_003888.3	RefSeq	sequence_feature	7400040	7400093	.	-	.	ID=id8716;Dbxref=GeneID:1102101;Note=PS00958 Transaldolase active site;gbkey=misc_feature;gene=tal1
NC_003888.3	RefSeq	sequence_feature	7400355	7400381	.	-	.	ID=id8717;Dbxref=GeneID:1102101;Note=PS01054 Transaldolase signature 1;gbkey=misc_feature;gene=tal1
NC_003888.3	RefSeq	gene	7400592	7402688	.	-	.	ID=gene6724;Dbxref=GeneID:1102102;Name=tktB;gbkey=Gene;gene=tktB;gene_biotype=protein_coding;gene_synonym=tktB;locus_tag=SCO6663
NC_003888.3	RefSeq	CDS	7400592	7402688	.	-	0	ID=cds6597;Parent=gene6724;Dbxref=Genbank:NP_630738.1,GeneID:1102102;Name=NP_630738.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;gene=tktB;product=transketolase;protein_id=NP_630738.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7400634	7402613	.	-	.	ID=id8718;Dbxref=GeneID:1102102;Note=Pfam match to entry PF00456 transketolase%2C Transketolase%2C score 1163.10%2C E-value 0;gbkey=misc_feature;gene=tktB
NC_003888.3	RefSeq	sequence_feature	7401150	7401200	.	-	.	ID=id8719;Dbxref=GeneID:1102102;Note=PS00802 Transketolase signature 2;gbkey=misc_feature;gene=tktB
NC_003888.3	RefSeq	sequence_feature	7402170	7402173	.	-	.	ID=id8720;Dbxref=GeneID:1102102;Note=end of true overlap with cosmid 4G2;gbkey=misc_feature;gene=tktB
NC_003888.3	RefSeq	ribosome_entry_site	7402699	7402702	.	-	.	ID=id8721;Note=possible RBS upstream of tkt;gbkey=RBS
NC_003888.3	RefSeq	sequence_feature	7402704	7402707	.	+	.	ID=id8722;Note=end of true overlap with cosmid 6G3;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7402837	7402840	.	+	.	ID=id8723;Note=possible RBS upstream of SC5A7.14;gbkey=RBS
NC_003888.3	RefSeq	gene	7402846	7403751	.	+	.	ID=gene6725;Dbxref=GeneID:1102103;Name=SC5A7.14;gbkey=Gene;gene=SC5A7.14;gene_biotype=protein_coding;gene_synonym=SC5A7.14;locus_tag=SCO6664
NC_003888.3	RefSeq	CDS	7402846	7403751	.	+	0	ID=cds6598;Parent=gene6725;Dbxref=Genbank:NP_630739.1,GeneID:1102103;Name=NP_630739.1;Note=SC5A7.14%2C probable transcriptional regulator%2C len: 301 aa%3B some similarity to many members of the araC family%2C e.g. MMSR_PSEAE MmsAB operon regulatory protein (307 aa)%2C fasta scores%3B opt: 113 z-score: 251.4 E(): 9.2e-07%2C 25.4%25 identity in 303 aa overlap. Contains probable helix-turn-helix motif from aa 216-237 (Score 1252%2C +3.45 SD) and Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 63.30%2C E-value 5.3e-15;gbkey=CDS;gene=SC5A7.14;product=transcriptional regulator;protein_id=NP_630739.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7403485	7403745	.	+	.	ID=id8724;Dbxref=GeneID:1102103;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 63.30%2C E-value 5.3e-15;gbkey=misc_feature;gene=SC5A7.14
NC_003888.3	RefSeq	gene	7403831	7405231	.	-	.	ID=gene6726;Dbxref=GeneID:1102104;Name=SC5A7.15c;gbkey=Gene;gene=SC5A7.15c;gene_biotype=protein_coding;gene_synonym=SC5A7.15c;locus_tag=SCO6665
NC_003888.3	RefSeq	CDS	7403831	7405231	.	-	0	ID=cds6599;Parent=gene6726;Dbxref=Genbank:NP_630740.1,GeneID:1102104;Name=NP_630740.1;Note=SC5A7.15c%2C probable  glucosidase%2C len: 466 aa%3B similar to e.g. TR:G2981143 (EMBL:AF052745) beta-1%2C3-glucanase II from Oerskovia xanthineolytica (435 aa)%2C fasta scores%3B opt: 313 z-score: 413.3 E(): 8.7e-16%2C 37.0%25 identity in 435 aa overlapand XYND_BACPO endo-1%2C4-beta-xylanase D precursor (Bacillus polymyxa) (635 aa)%2C fasta scores%3B opt: 339 z-score: 315.2 E(): 2.6e-10%2C 27.5%25 identity in 447 aa overlap;gbkey=CDS;gene=SC5A7.15c;product=glucosidase;protein_id=NP_630740.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7405242	7405245	.	-	.	ID=id8725;Note=possible RBS upstream of SC5A7.15c;gbkey=RBS
NC_003888.3	RefSeq	gene	7405534	7407651	.	-	.	ID=gene6727;Dbxref=GeneID:1102105;Name=SC5A7.16c;gbkey=Gene;gene=SC5A7.16c;gene_biotype=protein_coding;gene_synonym=SC5A7.16c;locus_tag=SCO6666
NC_003888.3	RefSeq	CDS	7405534	7407651	.	-	0	ID=cds6600;Parent=gene6727;Dbxref=Genbank:NP_630741.1,GeneID:1102105;Name=NP_630741.1;Note=SC5A7.16c%2C probable integral membrane protein len: 705 aa%3B similar to many hypothetical membrane proteins e.g. M. tuberculosis TR:E1299723 (EMBL:AL021928) MMPL3 (944 aa)%2C fasta scores%3B opt: 482 z-score: 907.8 E(): 0%2C 33.3%25 identity in 744 aa overlap;gbkey=CDS;gene=SC5A7.16c;product=hypothetical protein;protein_id=NP_630741.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7407656	7407660	.	-	.	ID=id8726;Note=possible RBS upstream of SC5A7.16c;gbkey=RBS
NC_003888.3	RefSeq	gene	7407798	7408466	.	-	.	ID=gene6728;Dbxref=GeneID:1102106;Name=SC5A7.17c;gbkey=Gene;gene=SC5A7.17c;gene_biotype=protein_coding;gene_synonym=SC5A7.17c;locus_tag=SCO6667
NC_003888.3	RefSeq	CDS	7407798	7408466	.	-	0	ID=cds6601;Parent=gene6728;Dbxref=Genbank:NP_630742.1,GeneID:1102106;Name=NP_630742.1;Note=SC5A7.17c%2C probable two-component regulator%2C len: 222 aa%3B highly similar to many e.g. DEGU_BACSU transcriptional regulatory protein DegU (229 aa)%2C fasta scores%3B opt: 561 z-score: 630.7 E(): 7e-28%2C 44.0%25 identity in 225 aa overlap. Contains PS00622 Bacterial regulatory proteins%2C luxR family signature%2C probable helix-turn-helix motif from aa 173 to 194 (Score 1001%2C +2.60 SD) and Pfam matches to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 124.10%2C E-value 2.7e-33 and entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 86.30%2C E-value 6.1e-22;gbkey=CDS;gene=SC5A7.17c;product=two-component regulator;protein_id=NP_630742.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7407810	7408007	.	-	.	ID=id8727;Dbxref=GeneID:1102106;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 86.30%2C E-value 6.1e-22;gbkey=misc_feature;gene=SC5A7.17c
NC_003888.3	RefSeq	sequence_feature	7407873	7407956	.	-	.	ID=id8728;Dbxref=GeneID:1102106;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC5A7.17c
NC_003888.3	RefSeq	sequence_feature	7408122	7408460	.	-	.	ID=id8729;Dbxref=GeneID:1102106;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 124.10%2C E-value 2.7e-33;gbkey=misc_feature;gene=SC5A7.17c
NC_003888.3	RefSeq	gene	7408463	7409680	.	-	.	ID=gene6729;Dbxref=GeneID:1102107;Name=SC5A7.18c;gbkey=Gene;gene=SC5A7.18c;gene_biotype=protein_coding;gene_synonym=SC5A7.18c;locus_tag=SCO6668
NC_003888.3	RefSeq	CDS	7408463	7409680	.	-	0	ID=cds6602;Parent=gene6729;Dbxref=Genbank:NP_630743.1,GeneID:1102107;Name=NP_630743.1;Note=SC5A7.18c%2C probable two-component sensor%2C len: 405 aa%3B similar in C-terminus to many e.g. NARQ_ECOLI nitrate /nitrite sensor protein narQ (566 aa)%2C fasta scores%3B opt: 230 z-score: 252.5 E(): 7.9e-07%2C 30.7%25 identity in 202 aa overlap. N-terminus contains six probable trans-membrane domains. Contains probable coiled-coil from 168 to 197;gbkey=CDS;gene=SC5A7.18c;product=two-component sensor;protein_id=NP_630743.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7409686	7409690	.	-	.	ID=id8730;Note=possible RBS upstream of SC5A7.18c;gbkey=RBS
NC_003888.3	RefSeq	gene	7409712	7410506	.	-	.	ID=gene6730;Dbxref=GeneID:1102108;Name=SC5A7.19c;gbkey=Gene;gene=SC5A7.19c;gene_biotype=protein_coding;gene_synonym=SC5A7.19c;locus_tag=SCO6669
NC_003888.3	RefSeq	CDS	7409712	7410506	.	-	0	ID=cds6603;Parent=gene6730;Dbxref=Genbank:NP_630744.1,GeneID:1102108;Name=NP_630744.1;Note=SC5A7.19c%2C probable transcriptional regulator%2C len: 264 aa%3B similar to members of the iclR family e.g. GYLR_STRCO glycerol operon regulatory protein (254 aa)%2C fasta scores%3B opt: 277 z-score: 318.0 E(): 1.8e-10%2C 31.4%25 identity in 245 aa overlap. Contains probable helix-turn-helix motif from aa 28-49 (Score 1240%2C +3.41 SD);gbkey=CDS;gene=SC5A7.19c;product=transcriptional regulator;protein_id=NP_630744.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7410635	7410638	.	+	.	ID=id8731;Note=possible RBS upstream of SC5A7.20;gbkey=RBS
NC_003888.3	RefSeq	gene	7410645	7411970	.	+	.	ID=gene6731;Dbxref=GeneID:1102109;Name=SC5A7.20;gbkey=Gene;gene=SC5A7.20;gene_biotype=protein_coding;gene_synonym=SC5A7.20;locus_tag=SCO6670
NC_003888.3	RefSeq	CDS	7410645	7411970	.	+	0	ID=cds6604;Parent=gene6731;Dbxref=Genbank:NP_630745.1,GeneID:1102109;Name=NP_630745.1;Note=SC5A7.20%2C probable glucosidase%2C len: 441 aa%3B similar to e.g. CELF_ECOLI 6-phospho-beta-glucosidase (450 aa)%2C fasta scores%3B opt: 537 z-score: 628.7 E(): 8.8e-28%2C 31.8%25 identity in 456 aa overlap;gbkey=CDS;gene=SC5A7.20;product=glucosidase;protein_id=NP_630745.1;transl_table=11
NC_003888.3	RefSeq	gene	7411963	7413129	.	-	.	ID=gene6732;Dbxref=GeneID:1102110;Name=SC5A7.21c;gbkey=Gene;gene=SC5A7.21c;gene_biotype=protein_coding;gene_synonym=SC5A7.21c;locus_tag=SCO6671
NC_003888.3	RefSeq	CDS	7411963	7413129	.	-	0	ID=cds6605;Parent=gene6732;Dbxref=Genbank:NP_630746.1,GeneID:1102110;Name=NP_630746.1;Note=SC5A7.21c%2C unknown%2C len: 388 aa%3B Similar to TR:Q9RSB2 (EMBL:AE002054) conserved hypothetical protein from Deinococcus radiodurans (338 aa) fasta scores%3B opt: 415%2C Z-score: 392.3%2C E(): 3.2e-14%2C 31.333%25 identity (32.639%25 ungapped) in 300 aa overlap. Contains nine degenerate PA repeats at C-terminus;gbkey=CDS;gene=SC5A7.21c;product=hypothetical protein;protein_id=NP_630746.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7412011	7412064	.	-	.	ID=id8732;Dbxref=GeneID:1102110;Note=9 x 6 bp repeats;gbkey=repeat_region;gene=SC5A7.21c
NC_003888.3	RefSeq	ribosome_entry_site	7413135	7413141	.	-	.	ID=id8733;Note=possible RBS upstream of SC5A7.21c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7413400	7413403	.	+	.	ID=id8734;Note=possible RBS upstream of SC5A7.22;gbkey=RBS
NC_003888.3	RefSeq	gene	7413412	7414299	.	+	.	ID=gene6733;Dbxref=GeneID:1102111;Name=SC5A7.22;gbkey=Gene;gene=SC5A7.22;gene_biotype=protein_coding;gene_synonym=SC5A7.22;locus_tag=SCO6672
NC_003888.3	RefSeq	CDS	7413412	7414299	.	+	0	ID=cds6606;Parent=gene6733;Dbxref=Genbank:NP_630747.1,GeneID:1102111;Name=NP_630747.1;Note=SC5A7.22%2C unknown%2C len: 295 aa%3B similar to a hypothetical protein from M. tuberculosis TR:O33337 (EMBL:AL008967) MTV002.60C (324 aa)%2C fasta scores%3B opt: 1202 z-score: 1507.9 E(): 0%2C 57.2%25 identity in 285 aa overlap;gbkey=CDS;gene=SC5A7.22;product=hypothetical protein;protein_id=NP_630747.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7414283	7414289	.	+	.	ID=id8735;Dbxref=GeneID:1102111;Note=possible RBS upstream of SC5A7.23;gbkey=RBS;gene=SC5A7.22
NC_003888.3	RefSeq	gene	7414296	7414976	.	+	.	ID=gene6734;Dbxref=GeneID:1102112;Name=SC5A7.23;gbkey=Gene;gene=SC5A7.23;gene_biotype=protein_coding;gene_synonym=SC5A7.23;locus_tag=SCO6673
NC_003888.3	RefSeq	CDS	7414296	7414976	.	+	0	ID=cds6607;Parent=gene6734;Dbxref=Genbank:NP_630748.1,GeneID:1102112;Name=NP_630748.1;Note=SC5A7.23%2C unknown%2C len: 226 aa%3B similar to hypothetical proteins from Streptomyces and M. tuberculosis e.g. S. coelicolor TR:O24813 (EMBL:AB007189) (208 aa)%2C fasta scores%3B opt: 674 z-score: 960.0 E(): 0%2C 49.1%25 identity in 214 aa overlap;gbkey=CDS;gene=SC5A7.23;product=hypothetical protein;protein_id=NP_630748.1;transl_table=11
NC_003888.3	RefSeq	gene	7414995	7415231	.	-	.	ID=gene6735;Dbxref=GeneID:1102113;Name=SC5A7.24c;gbkey=Gene;gene=SC5A7.24c;gene_biotype=protein_coding;gene_synonym=SC5A7.24c;locus_tag=SCO6674
NC_003888.3	RefSeq	CDS	7414995	7415231	.	-	0	ID=cds6608;Parent=gene6735;Dbxref=Genbank:NP_630749.1,GeneID:1102113;Name=NP_630749.1;Note=SC5A7.24c%2C unknown%2C len: 78 aa;gbkey=CDS;gene=SC5A7.24c;product=hypothetical protein;protein_id=NP_630749.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7415241	7415244	.	-	.	ID=id8736;Note=possible RBS upstream of SC5A7.24c;gbkey=RBS
NC_003888.3	RefSeq	gene	7415327	7415983	.	-	.	ID=gene6736;Dbxref=GeneID:1102114;Name=SC5A7.25c;gbkey=Gene;gene=SC5A7.25c;gene_biotype=protein_coding;gene_synonym=SC5A7.25c;locus_tag=SCO6675
NC_003888.3	RefSeq	CDS	7415327	7415983	.	-	0	ID=cds6609;Parent=gene6736;Dbxref=Genbank:NP_630750.1,GeneID:1102114;Name=NP_630750.1;Note=SC5A7.25c%2C possible DNA-binding protein%2C len: 218 aa. Contains probable helix-turn-helix motif from aa 92-113 (Score 1665%2C +4.86 SD);gbkey=CDS;gene=SC5A7.25c;product=DNA-binding protein;protein_id=NP_630750.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7415992	7415996	.	-	.	ID=id8737;Note=possible RBS upstream of SC5A7.25c;gbkey=RBS
NC_003888.3	RefSeq	gene	7416168	7416875	.	+	.	ID=gene6737;Dbxref=GeneID:1102115;Name=SC5A7.26;gbkey=Gene;gene=SC5A7.26;gene_biotype=protein_coding;gene_synonym=SC5A7.26;locus_tag=SCO6676
NC_003888.3	RefSeq	CDS	7416168	7416875	.	+	0	ID=cds6610;Parent=gene6737;Dbxref=Genbank:NP_630751.1,GeneID:1102115;Name=NP_630751.1;Note=SC5A7.26%2C unknown%2C len: 235 aa;gbkey=CDS;gene=SC5A7.26;product=hypothetical protein;protein_id=NP_630751.1;transl_table=11
NC_003888.3	RefSeq	gene	7416767	7417309	.	-	.	ID=gene6738;Dbxref=GeneID:1102116;Name=SC5A7.27c;gbkey=Gene;gene=SC5A7.27c;gene_biotype=protein_coding;gene_synonym=SC5A7.27c;locus_tag=SCO6677
NC_003888.3	RefSeq	CDS	7416767	7417309	.	-	0	ID=cds6611;Parent=gene6738;Dbxref=Genbank:NP_630752.1,GeneID:1102116;Name=NP_630752.1;Note=SC5A7.27c%2C probable ABC transporter ATP-binding protein%2C len: 180 aa%3B similar to part of many e.g. taurine transport atp-binding protein tauB (255 aa)%2C fasta scores%3B opt: 309 z-score: 436.0 E(): 4.9e-17%2C 43.6%25 identity in 117 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 31.20%2C E-value 1.9e-09. Has large overlap with convergent downstream gene%3B database similarities do not extend into the overlap. The sequence of the cosmid has been checked%2C and is correct;gbkey=CDS;gene=SC5A7.27c;product=ABC transporter ATP-binding protein;protein_id=NP_630752.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7416899	7417300	.	-	.	ID=id8738;Dbxref=GeneID:1102116;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 31.20%2C E-value 1.9e-09;gbkey=misc_feature;gene=SC5A7.27c
NC_003888.3	RefSeq	gene	7417332	7418273	.	-	.	ID=gene6739;Dbxref=GeneID:1102117;Name=SC5A7.28c;gbkey=Gene;gene=SC5A7.28c;gene_biotype=protein_coding;gene_synonym=SC5A7.28c;locus_tag=SCO6678
NC_003888.3	RefSeq	CDS	7417332	7418273	.	-	0	ID=cds6612;Parent=gene6739;Dbxref=Genbank:NP_630753.1,GeneID:1102117;Name=NP_630753.1;Note=SC5A7.28c%2C probable iron-sulfur oxidoreductase beta subunit%2C len: 313 aa%3B similar to many e.g. POBB_PSEPS phenoxybenzoate dioxygenase beta subunit (Pseudomonas pseudoalcaligenes) (319 aa)%2C fasta scores%3B opt: 824 z-score: 993.1 E(): 0%2C 45.9%25 identity in 303 aa overlap. C-terminus is a 2Fe-2S ferredoxin domain similar to e.g. FERV_ANAVA ferredoxin%2C vegetative (Anabaena variabilis) (98 aa)%2C fasta scores%3B opt: 187 z-score: 222.4 E(): 3.8e-05%2C 38.2%25 identity in 68 aa overlap. Contains PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature and Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 35.50%2C E-value 1.2e-06;gbkey=CDS;gene=SC5A7.28c;product=iron-sulfur oxidoreductase subunit beta;protein_id=NP_630753.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7417341	7417595	.	-	.	ID=id8739;Dbxref=GeneID:1102117;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 35.50%2C E-value 1.2e-06;gbkey=misc_feature;gene=SC5A7.28c
NC_003888.3	RefSeq	sequence_feature	7417464	7417490	.	-	.	ID=id8740;Dbxref=GeneID:1102117;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SC5A7.28c
NC_003888.3	RefSeq	gene	7418270	7418440	.	-	.	ID=gene6740;Dbxref=GeneID:1102118;Name=SC5A7.29c;gbkey=Gene;gene=SC5A7.29c;gene_biotype=protein_coding;gene_synonym=SC5A7.29c;locus_tag=SCO6679
NC_003888.3	RefSeq	CDS	7418270	7418440	.	-	0	ID=cds6613;Parent=gene6740;Dbxref=Genbank:NP_630754.1,GeneID:1102118;Name=NP_630754.1;Note=SC5A7.29c%2C unknown%2C len: 56 aa;gbkey=CDS;gene=SC5A7.29c;product=hypothetical protein;protein_id=NP_630754.1;transl_table=11
NC_003888.3	RefSeq	gene	7418437	7419516	.	-	.	ID=gene6741;Dbxref=GeneID:1102119;Name=SC5A7.30c;gbkey=Gene;gene=SC5A7.30c;gene_biotype=protein_coding;gene_synonym=SC5A7.30c;locus_tag=SCO6680
NC_003888.3	RefSeq	CDS	7418437	7419516	.	-	0	ID=cds6614;Parent=gene6741;Dbxref=Genbank:NP_630755.1,GeneID:1102119;Name=NP_630755.1;Note=SC5A7.30c%2C probable oxidoreductase alpha subunit%2C len: 359 aa%3B similar to many e.g. VANA_PSES9 vanillate demethylase (monooxygenase) (329 aa)%2C fasta scores%3B opt: 636 z-score: 695.7 E(): 1.7e-31%2C 34.6%25 identity in 338 aa overlap;gbkey=CDS;gene=SC5A7.30c;product=oxidoreductase subunit alpha;protein_id=NP_630755.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7418445	7418449	.	-	.	ID=id8741;Dbxref=GeneID:1102119;Note=possible RBS upstream of SC5A7.29c;gbkey=RBS;gene=SC5A7.30c
NC_003888.3	RefSeq	ribosome_entry_site	7419523	7419526	.	-	.	ID=id8742;Note=possible RBS upstream of SC5A7.30c;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7419658	7419661	.	+	.	ID=id8743;Note=possible RBS upstream of SC5A7.31;gbkey=RBS
NC_003888.3	RefSeq	gene	7419664	7422456	.	+	.	ID=gene6742;Dbxref=GeneID:1102120;Name=SC5A7.31;gbkey=Gene;gene=SC5A7.31;gene_biotype=protein_coding;gene_synonym=SC5A7.31;locus_tag=SCO6681
NC_003888.3	RefSeq	CDS	7419664	7422456	.	+	0	ID=cds6615;Parent=gene6742;Dbxref=Genbank:NP_630756.1,GeneID:1102120;Name=NP_630756.1;Note=SC5A7.31%2C unknown%2C len 930 aa%3B some similarity to several e.g. PKN2_MYXXA serine-threonine-protein kinase Pkn2 (Myxococcus xanthus) (830 aa)%2C Smith-Waterman scores%3B E: 1.5e-06%2C 23%25 identity in 829 bp overlap. Also has short segment of similarity to the active site regions of several Serine-Threonine protein kinases e.g. PKAA_STRCO P54739 serine-threonine protein kinase pkaA (533 aa)%2C blastp scores%3B Expect%3D 3.7e-05%2C 39%25 identity in 27 aa overlap. Contains possible transmembrane anchor and six degenerate repeats of the sequence VDETTR;gbkey=CDS;gene=SC5A7.31;product=Ser/Thr protein kinase;protein_id=NP_630756.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7421140	7421247	.	+	.	ID=id8744;Dbxref=GeneID:1102120;Note=6x 18 bp repeats;gbkey=repeat_region;gene=SC5A7.31
NC_003888.3	RefSeq	sequence_feature	7421543	7426522	.	+	.	ID=id8745;Note=99.98%25 identical (1 conflict) to SC03771 U03771 Streptomyces coelicolor A3(2) aerial mycelium formation gene cluster (ramA%2C ramB%2C and ramR) genes from 1 to 4980;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7422482	7422486	.	+	.	ID=id8746;Note=possible RBS upstream of SC5A7.32;gbkey=RBS
NC_003888.3	RefSeq	gene	7422494	7422622	.	+	.	ID=gene6743;Dbxref=GeneID:1102121;Name=SC5A7.32;gbkey=Gene;gene=SC5A7.32;gene_biotype=protein_coding;gene_synonym=SC5A7.32;locus_tag=SCO6682
NC_003888.3	RefSeq	CDS	7422494	7422622	.	+	0	ID=cds6616;Parent=gene6743;Dbxref=Genbank:NP_630757.1,GeneID:1102121;Name=NP_630757.1;Note=SC5A7.32%2C unknown%2C len: 42 aa%3B similar to CDS upstream of S. griseus RamA TR:Q07642 (EMBL:D13614) (43 aa)%2C fasta scores%3B opt: 154 z-score: 293.0 E(): 4.4e-09%2C 53.7%25 identity in 41 aa overlap;gbkey=CDS;gene=SC5A7.32;product=hypothetical protein;protein_id=NP_630757.1;transl_table=11
NC_003888.3	RefSeq	gene	7422658	7424568	.	+	.	ID=gene6744;Dbxref=GeneID:1102122;Name=ramA;gbkey=Gene;gene=ramA;gene_biotype=protein_coding;gene_synonym=ramA;locus_tag=SCO6683
NC_003888.3	RefSeq	CDS	7422658	7424568	.	+	0	ID=cds6617;Parent=gene6744;Dbxref=Genbank:NP_630758.1,GeneID:1102122;Name=NP_630758.1;Note=SC5A7.33%2C ramA%2C probable ABC transporter%2C len: 636 aa%3B N-terminus contains transmembrane domain%2C C-terminus contains ATP-binding domain. Almost identical to TR:Q53818 (EMBL:U03771) potential ATP-binding membrane transport protein RamA (636 aa)(99.8%25 identity in 636 aa overlap)Y08A_MYCTU hypothetical ABC transporter ATP-binding protein MTCY50.10 (631 aa)%2C fasta scores%3B opt: 556 z-score: 414.6 E(): 7.4e-16%2C 28.1%25 identity in 626 aa overlap. Contains sixteen degenerate GA repeats at C-terminus%2C PS00017 ATP /GTP-binding match to entry PF00005 ABC_tran%2C ABC transporters%2C score 139.50%2C E-value 6e-38. Some similarity to RamB (E(): 3.7e-05%2C 32.7%25 identity in 627 aa overlap);gbkey=CDS;gene=ramA;product=ABC transporter ATP-binding protein;protein_id=NP_630758.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7423792	7424340	.	+	.	ID=id8747;Dbxref=GeneID:1102122;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 139.50%2C E-value 6e-38;gbkey=misc_feature;gene=ramA
NC_003888.3	RefSeq	sequence_feature	7423813	7423836	.	+	.	ID=id8748;Dbxref=GeneID:1102122;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ramA
NC_003888.3	RefSeq	repeat_region	7424404	7424499	.	+	.	ID=id8749;Dbxref=GeneID:1102122;Note=16 x 6 bp degenerate repeats;gbkey=repeat_region;gene=ramA
NC_003888.3	RefSeq	ribosome_entry_site	7424554	7424557	.	+	.	ID=id8750;Dbxref=GeneID:1102122;Note=possible RBS upstream of ramB;gbkey=RBS;gene=ramA
NC_003888.3	RefSeq	gene	7424565	7426391	.	+	.	ID=gene6745;Dbxref=GeneID:1102123;Name=ramB;gbkey=Gene;gene=ramB;gene_biotype=protein_coding;gene_synonym=ramB;locus_tag=SCO6684
NC_003888.3	RefSeq	CDS	7424565	7426391	.	+	0	ID=cds6618;Parent=gene6745;Dbxref=Genbank:NP_630759.1,GeneID:1102123;Name=NP_630759.1;Note=SC5A7.34%2C ramB%2C probable ABC transporter%2C len: 608 aa%3B N-terminus contains transmembrane domain%2C C-terminus contains ATP-binding domain. IdenticalTR:Q53819 (EMBL:U03771) potential ATP-binding membrane protein RamB (608 aa) and similar tyo many e.g. Y07D_MYCTU hypothetical ABC transporter ATP-binding protein MTCY02B10.13 (579 aa)%2C fasta scores%3B opt: 456 z-score: 443.0 E(): 1.9e-17%2C 31.8%25 identity in 614 aa overlap. Contains sixteen degenerate PE repeats between the N- andC-terminal domains. Also contains PS00017 ATP /GTP-binding site motif A (P-loop)%2C PS00211 ABC transporters family signature and Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 157.10%2C E-value 3e-43. Some similarity to RamA (E(): 2.7e-05%2C 33.4%25 identity in 628 aa overlap);gbkey=CDS;gene=ramB;product=ABC transporter ATP-binding protein;protein_id=NP_630759.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7425528	7425623	.	+	.	ID=id8751;Dbxref=GeneID:1102123;Note=16 x 6 bp degenerate repeats;gbkey=repeat_region;gene=ramB
NC_003888.3	RefSeq	sequence_feature	7425771	7426307	.	+	.	ID=id8752;Dbxref=GeneID:1102123;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporters%2C score 157.10%2C E-value 3e-43;gbkey=misc_feature;gene=ramB
NC_003888.3	RefSeq	sequence_feature	7425792	7425815	.	+	.	ID=id8753;Dbxref=GeneID:1102123;Note=PS00017 ATP /GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=ramB
NC_003888.3	RefSeq	sequence_feature	7426095	7426139	.	+	.	ID=id8754;Dbxref=GeneID:1102123;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=ramB
NC_003888.3	RefSeq	gene	7426396	7427004	.	-	.	ID=gene6746;Dbxref=GeneID:1102124;Name=ramR;gbkey=Gene;gene=ramR;gene_biotype=protein_coding;gene_synonym=ramR,SC6G3.01c;locus_tag=SCO6685
NC_003888.3	RefSeq	CDS	7426396	7427004	.	-	0	ID=cds6619;Parent=gene6746;Dbxref=Genbank:NP_733711.1,GeneID:1102124;Name=NP_733711.1;Note=SC5A7.35c%2C ramR%2C two-component system response regulator%2C len: >41 aa. Identical to TR:Q53820 (EMBL:U03771) potential response regulator for aerial mycelium production RamR (202 aa)%2C and similar to many e.g. Streptomyces peucetius TR:Q54821 (EMBL:L37338) daunorubicin biosynthesis regulatory protein dnrN (202 aa)%2C fasta scores%3B opt: 173 z-score: 382.4 E(): 4.6e-14%2C 65.0%25 identity in 40 aa overlap~SC6G3.01c%2C ramR%2C probable two-component system response regulator%2C partial CDS%2C len: >201 aa%3B previously sequenced as TR:Q53820 (EMBL:U03771)%2C RamR%2C potential response regulator for aerial mycelium production. Similar to many two-component system transcriptional regulators e.g. TR:Q07640 (EMBL:AB006206)%2C AfmR%2C Streptomyces griseus transcriptional regulator involved in aerial mycelium formation (210 aa)%2C fasta scores%3B opt: 466 z-score: 545.2 E(): 4.9e-23%2C 42.6%25 identity in 202 aa overlap. An alternative start codon is present at codon 4. Contains probable helix-turn-helix motif at aa 158-179 (Score 1876%2C +5.58 SD). Contains Pfam match to PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family;gbkey=CDS;gene=ramR;product=two-component system response regulator;protein_id=NP_733711.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7426400	7428171	.	+	.	ID=id8755;Note=sequence equivalent to EMBL:U03771 from 4858 to 6629;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7426400	7426522	.	+	.	ID=id8756;Note=overlap with Streptomyces coelicolor cosmid 5A7 (EMBL:AL031107) from 40215 to 40337.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7426402	7426590	.	-	.	ID=id8757;Dbxref=GeneID:1102124;Note=Match to PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family Score 52.54;gbkey=misc_feature;gene=ramR
NC_003888.3	RefSeq	gene	7427533	7428411	.	+	.	ID=gene6747;Dbxref=GeneID:1102125;Name=SC6G3.02;gbkey=Gene;gene=SC6G3.02;gene_biotype=protein_coding;gene_synonym=SC6G3.02;locus_tag=SCO6686
NC_003888.3	RefSeq	CDS	7427533	7428411	.	+	0	ID=cds6620;Parent=gene6747;Dbxref=Genbank:NP_630760.1,GeneID:1102125;Name=NP_630760.1;Note=SC6G3.02%2C hypothetical protein%2C len: 292 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Similar to TR:Q9RJY9 (EMBL:AL133210) Streptomyces coelicolor hypothetical protein SCF37.12%2C 284 aa%3B fasta scores: opt: 864 Z-score: 995.3 E(): 8.3e-48%3B 47.902%25 identity in 286 aa overlap;gbkey=CDS;gene=SC6G3.02;product=hypothetical protein;protein_id=NP_630760.1;transl_table=11
NC_003888.3	RefSeq	gene	7428452	7433488	.	+	.	ID=gene6748;Dbxref=GeneID:1102126;Name=SC6G3.03;gbkey=Gene;gene=SC6G3.03;gene_biotype=protein_coding;gene_synonym=SC6G3.03;locus_tag=SCO6687
NC_003888.3	RefSeq	CDS	7428452	7433488	.	+	0	ID=cds6621;Parent=gene6748;Dbxref=Genbank:NP_630761.1,GeneID:1102126;Name=NP_630761.1;Note=SC6G3.03%2C hypothetical protein%2C len: 1678 aa%3B unknown function%2C probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition. Contains probable helix-turn-helix motif at aa 1209-1230 (Score 1004%2C +2.61 SD). Similar to TR:Q9RJY8 (EMBL:AL133210) Streptomyces coelicolor hypothetical protein SCF37.13%2C 1726 aa%3B fasta scores: opt: 690 Z-score: 706.5 E(): 1e-31%3B 35.556%25 identity in 1800 aa overlap;gbkey=CDS;gene=SC6G3.03;product=DNA-binding protein;protein_id=NP_630761.1;transl_table=11
NC_003888.3	RefSeq	gene	7433569	7437084	.	+	.	ID=gene6749;Dbxref=GeneID:1102127;Name=SC6G3.04;gbkey=Gene;gene=SC6G3.04;gene_biotype=protein_coding;gene_synonym=SC6G3.04;locus_tag=SCO6688
NC_003888.3	RefSeq	CDS	7433569	7437084	.	+	0	ID=cds6622;Parent=gene6749;Dbxref=Genbank:NP_630762.1,GeneID:1102127;Name=NP_630762.1;Note=SC6G3.04%2C hypothetical protein%2C len: 1171 aa%3B unknown function%2C C-terminal 380 aa (approx.) similar to SW:YEHP_ECOLI (EMBL:AE000301)%2C yehP%2C Escherichia coli hypothetical protein (378 aa)%2C fasta scores%3B opt: 610 z-score: 603.7 E(): 2.7e-26%2C 34.5%25 identity in 394 aa overlap and N-terminal 750 aa (approx.) similar to SW:YEHM_ECOLI (EMBL:AE000301)%2C yehM%2C Escherichia coli hypothetical protein (759 aa) (25.4%25 identity in 796 aa overlap). The hypothetical proteins yehMP are adjacent on the E.coli chromosome. Part of this probable CDS (aa 530-830 approx.) is also similar to TR:Q54218 (EMBL:X77865) Streptomyces griseus chain length determination factor (412 aa) (31.5%25 identity in 340 aa overlap);gbkey=CDS;gene=SC6G3.04;product=hypothetical protein;protein_id=NP_630762.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7436445	7436485	.	+	.	ID=id8758;Dbxref=GeneID:1102127;Note=imperfect 41 bp inverted repeat;gbkey=repeat_region;gene=SC6G3.04
NC_003888.3	RefSeq	gene	7437081	7438847	.	+	.	ID=gene6750;Dbxref=GeneID:1102128;Name=SC6G3.05;gbkey=Gene;gene=SC6G3.05;gene_biotype=protein_coding;gene_synonym=SC6G3.05;locus_tag=SCO6689
NC_003888.3	RefSeq	CDS	7437081	7438847	.	+	0	ID=cds6623;Parent=gene6750;Dbxref=Genbank:NP_630763.1,GeneID:1102128;Name=NP_630763.1;Note=SC6G3.05%2C hypothetical protein%2C len: 588 aa%3B similar to TR:Q9RJY5 (EMBL:AL133210) Streptomyces coelicolor hypothetical protein SCF37.16%2C 667 aa%3B fasta scores: opt: 633 Z-score: 604.5 E(): 4.9e-26%3B 40.441%25 identity in 680 aa overlap. Probable CDS suggested by GC frameplot%2C positional base preference and amino acid composition;gbkey=CDS;gene=SC6G3.05;product=hypothetical protein;protein_id=NP_630763.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7437653	7437693	.	+	.	ID=id8759;Dbxref=GeneID:1102128;Note=imperfect 41 bp inverted repeat;gbkey=repeat_region;gene=SC6G3.05
NC_003888.3	RefSeq	repeat_region	7438848	7438879	.	+	.	ID=id8760;Note=imperfect 32 bp direct repeat;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	7438885	7438916	.	+	.	ID=id8761;Note=imperfect 32 bp direct repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7438926	7440206	.	-	.	ID=gene6751;Dbxref=GeneID:1102129;Name=SC6G3.06c;gbkey=Gene;gene=SC6G3.06c;gene_biotype=protein_coding;gene_synonym=SC6G3.06c;locus_tag=SCO6690
NC_003888.3	RefSeq	CDS	7438926	7440206	.	-	0	ID=cds6624;Parent=gene6751;Dbxref=Genbank:NP_630764.1,GeneID:1102129;Name=NP_630764.1;Note=SC6G3.06c%2C probable transmembrane transport protein%2C len: 426 aa%3B similar to many transporters e.g. SW:KGTP_ECOLI (EMBL:X53027)%2C kgtP%2C Escherichia coli alpha-ketoglutarate permease (432 aa)%2C fasta scores%3B opt: 1088 z-score: 1249.1 E(): 0%2C 41.1%25 identity in 419 aa overlap. Highly similar to TR:Q03095 (EMBL:M64783) Streptomyces hygroscopicus bialaphos transport protein (447 aa) (57.3%25 identity in 412 aa overlap). Similar to TR:O86563 (EMBL:AL031184) S.coelicolor probable transmembrane transport protein (472 aa) (31.7%25 identity in 436 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Contains Pfam match to PF00083 sugar_tr%2C Sugar (and other) transporter%2C PS00216 Sugar transport proteins signature 1 and PS00217 Sugar transport proteins signature 2;gbkey=CDS;gene=SC6G3.06c;product=transmembrane transport protein;protein_id=NP_630764.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7438932	7440161	.	-	.	ID=id8762;Dbxref=GeneID:1102129;Note=Match to PF00083 sugar_tr%2C Sugar (and other) transporter Score 183.52;gbkey=misc_feature;gene=SC6G3.06c
NC_003888.3	RefSeq	sequence_feature	7439274	7439327	.	-	.	ID=id8763;Dbxref=GeneID:1102129;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC6G3.06c
NC_003888.3	RefSeq	sequence_feature	7439748	7439825	.	-	.	ID=id8764;Dbxref=GeneID:1102129;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=SC6G3.06c
NC_003888.3	RefSeq	gene	7440399	7442462	.	+	.	ID=gene6752;Dbxref=GeneID:1102130;Name=SC4C6.01;gbkey=Gene;gene=SC4C6.01;gene_biotype=protein_coding;gene_synonym=SC4C6.01,SC6G3.07;locus_tag=SCO6691
NC_003888.3	RefSeq	CDS	7440399	7442462	.	+	0	ID=cds6625;Parent=gene6752;Dbxref=Genbank:NP_733712.1,GeneID:1102130;Name=NP_733712.1;Note=SC4C6.01%2C probable phospholipase C%2C partial CDS%2C len: >501 aa%3B similar to e.g. SW:PHLN_PSEAE (EMBL:M59304)%2C plcN%2C Pseudomonas aeruginosa non-hemolytic phospholipase C precursor (692 aa)%2C fasta scores%3B opt: 1073 z-score: 1149.1 E(): 0%2C 44.7%25 identity in 524 aa overlap~SC6G3.07%2C probable phospholipase C%2C partial CDS%2C len: >221 aa%3B similar to e.g. SW:PHLN_PSEAE (EMBL:M59304)%2C plcN%2C Pseudomonas aeruginosa non-hemolytic phospholipase C precursor (692 aa)%2C fasta scores%3B opt: 853 z-score: 1021.1 E(): 0%2C 51.3%25 identity in 232 aa overlap. Continues in cosmid 4C6 (EMBL:AL079355) as SC4C6.01;gbkey=CDS;gene=SC4C6.01;product=phospholipase C;protein_id=NP_733712.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7440957	7441061	.	+	.	ID=id8765;Dbxref=GeneID:1102130;Note=overlap with Streptomyces coelicolor cosmid 4C6 (EMBL:AL079355) from 1 to 105;gbkey=misc_feature;gene=SC4C6.01
NC_003888.3	RefSeq	repeat_region	7442231	7442256	.	+	.	ID=id8766;Dbxref=GeneID:1102130;Note=repeat 1%3B 26 bp imperfect inverted repeat;gbkey=repeat_region;gene=SC4C6.01
NC_003888.3	RefSeq	gene	7442516	7443469	.	-	.	ID=gene6753;Dbxref=GeneID:1102131;Name=SC4C6.02c;gbkey=Gene;gene=SC4C6.02c;gene_biotype=protein_coding;gene_synonym=SC4C6.02c;locus_tag=SCO6692
NC_003888.3	RefSeq	CDS	7442516	7443469	.	-	0	ID=cds6626;Parent=gene6753;Dbxref=Genbank:NP_630765.1,GeneID:1102131;Name=NP_630765.1;Note=SC4C6.02c%2C probable integral membrane protein%2C len: 317 aa%3B similar to TR:O86668 (EMBL:AL031182) S.coelicolor probable integral membrane protein (299 aa)%2C fasta scores%3B opt: 288 z-score: 279.1 E(): 3.2e-08%2C 32.8%25 identity in 299 aa overlap and to TR:O33234 (EMBL:Z98209) Mycobacterium tuberculosis hypothetical protein (301 aa) (28.8%25 identity in 299 aa overlap). Contains hydrophobic%2C possible membrane-spanning regions. Weakly similar to TR:O86668 (EMBL:AL031182) S.coelicolor integral membrane protein (299 aa) (32.8%25 identity in 299 aa overlap);gbkey=CDS;gene=SC4C6.02c;product=hypothetical protein;protein_id=NP_630765.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7442561	7442586	.	-	.	ID=id8767;Dbxref=GeneID:1102131;Note=repeat 1%3B 26 bp imperfect inverted repeat;gbkey=repeat_region;gene=SC4C6.02c
NC_003888.3	RefSeq	gene	7443466	7444281	.	-	.	ID=gene6754;Dbxref=GeneID:1102132;Name=SC4C6.03c;gbkey=Gene;gene=SC4C6.03c;gene_biotype=protein_coding;gene_synonym=SC4C6.03c;locus_tag=SCO6693
NC_003888.3	RefSeq	CDS	7443466	7444281	.	-	0	ID=cds6627;Parent=gene6754;Dbxref=Genbank:NP_630766.1,GeneID:1102132;Name=NP_630766.1;Note=SC4C6.03c%2C possible membrane protein%2C len: 271 aa%3B similar to TR:Q9KZ06 (EMBL:AL355752) Streptomyces coelicolor  integral membrane protein SC10B7.28%2C 287 aa%3B fasta scores: opt: 489 Z-score: 561.8 E(): 1.2e-23%3B 36.471%25 identity in 255 aa overlap. Unknown function%2C probable CDS suggested by positional base preference%2C GC frame plot and amino acid composition. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC4C6.03c;product=hypothetical protein;protein_id=NP_630766.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7444366	7444415	.	+	.	ID=id8768;Note=stem is 21/22 (95%25) matches%2C 0 gaps%3B loop is 6 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7444457	7445071	.	+	.	ID=gene6755;Dbxref=GeneID:1102133;Name=SC4C6.04;gbkey=Gene;gene=SC4C6.04;gene_biotype=protein_coding;gene_synonym=SC4C6.04;locus_tag=SCO6694
NC_003888.3	RefSeq	CDS	7444457	7445071	.	+	0	ID=cds6628;Parent=gene6755;Dbxref=Genbank:NP_630767.1,GeneID:1102133;Name=NP_630767.1;Note=SC4C6.04%2C possible transcriptional regulator%2C len: 204 aa%3B similar to many e.g. TR:P72185 (EMBL:U51164)%2C HemR%2C Propionibacterium freudenreichii repressor protein from hemYHBXRL gene cluster (involved in the biosynthetic pathway from glutamate to protoheme) (259 aa)%2C fasta scores%3B opt: 205 z-score: 251.7 E(): 1.1e-06%2C 28.5%25 identity in 200 aa overlap. Contains probable helix-turn-helix motif at aa 45-66 (Score 1187%2C +3.23 SD). Weakly similar to others from S.coelicolor e.g. TR:O69987 (EMBL:AL022268) S.coelicolor probable transcriptional regulator%2C partial CDS (>111 aa) (42.4%25 identity in 85 aa overlap) is similar to the N-terminal half;gbkey=CDS;gene=SC4C6.04;product=transcriptional regulator;protein_id=NP_630767.1;transl_table=11
NC_003888.3	RefSeq	gene	7445240	7446283	.	-	.	ID=gene6756;Dbxref=GeneID:1102134;Name=SC4C6.05c;gbkey=Gene;gene=SC4C6.05c;gene_biotype=protein_coding;gene_synonym=SC4C6.05c;locus_tag=SCO6695
NC_003888.3	RefSeq	CDS	7445240	7446283	.	-	0	ID=cds6629;Parent=gene6756;Dbxref=Genbank:NP_630768.1,GeneID:1102134;Name=NP_630768.1;Note=SC4C6.05c%2C possible membrane protein%2C len: 347 aa%3B similar to TR:O88067 (EMBL:AL031541) S.coelicolor possible membrane protein (319 aa)%2C fasta scores%3B opt: 474 z-score: 403.9 E(): 3.6e-15%2C 37.9%25 identity in 354 aa overlap. Contains 4x PPXQ repeats starting at aa 46. Contains a hydrophobic%2C possible membrane-spanning region. Similar to TR:O88067 (EMBL:AL031541) S.coelicolor possible membrane protein (319 aa) (37.9%25 identity in 354 aa overlap). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4C6.05c;product=hypothetical protein;protein_id=NP_630768.1;transl_table=11
NC_003888.3	RefSeq	gene	7446559	7449240	.	+	.	ID=gene6757;Dbxref=GeneID:1102135;Name=SC4C6.06;gbkey=Gene;gene=SC4C6.06;gene_biotype=protein_coding;gene_synonym=SC4C6.06;locus_tag=SCO6696
NC_003888.3	RefSeq	CDS	7446559	7449240	.	+	0	ID=cds6630;Parent=gene6757;Dbxref=Genbank:NP_630769.1,GeneID:1102135;Name=NP_630769.1;Note=SC4C6.06%2C possible regulatory protein%2C len: 893 aa%3B similar to many regulators e.g. TR:Q55103 (EMBL:D13457) Streptomyces sp. ORF upstream of the cholesterol oxidase-cytochrome P450 operon (642 aa) fasta scores%3B opt: 347 z-score: 383.0 E(): 5.2e-14%2C 31.7%25 identity in 599 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop). Similar to (EMBL:AL035569) SC8D9.18 possible regulatory protein (1091 aa) (28.1%25 identity in 945 aa overlap);gbkey=CDS;gene=SC4C6.06;product=regulatory protein;protein_id=NP_630769.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7446694	7446717	.	+	.	ID=id8769;Dbxref=GeneID:1102135;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4C6.06
NC_003888.3	RefSeq	repeat_region	7447397	7447427	.	+	.	ID=id8770;Dbxref=GeneID:1102135;Note=repeat 2%3B 31 bp imperfect inverted repeat;gbkey=repeat_region;gene=SC4C6.06
NC_003888.3	RefSeq	repeat_region	7448822	7448852	.	-	.	ID=id8771;Note=repeat 2%3B 31 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	7448876	7448909	.	+	.	ID=id8772;Dbxref=GeneID:1102135;Note=repeat 3%3B 33 bp imperfect inverted repeat;gbkey=repeat_region;gene=SC4C6.06
NC_003888.3	RefSeq	repeat_region	7449023	7449056	.	-	.	ID=id8773;Note=repeat 3%3B 33 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7449267	7450394	.	-	.	ID=gene6758;Dbxref=GeneID:1102136;Name=pcaL;gbkey=Gene;gene=pcaL;gene_biotype=protein_coding;gene_synonym=pcaL,SC4C6.07c;locus_tag=SCO6697
NC_003888.3	RefSeq	CDS	7449267	7450394	.	-	0	ID=cds6631;Parent=gene6758;Dbxref=Genbank:NP_630770.1,GeneID:1102136;Name=NP_630770.1;Note=SC4C6.07c%2C pcaL%2C probable 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase%2C len: 375 aa%3B similar to TR:O67982 (EMBL:AF003947)%2C pcaL%2C Rhodococcus opacus 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (400 aa)%2C fasta scores%3B opt: 401 z-score: 464.7 E(): 1.5e-18%2C 46.3%25 identity in 387 aa overlap the first approx. 260 aa is similar to SW:ELH2_ACICA (EMBL:AF009224)%2C catD%2C Acinetobacter calcoaceticus 3-oxoadipate enol-lactonase II (266 aa) (35.1%25 identity in 248 aa overlap) while the remainder is similar to SW:DC4C_ACICA (EMBL:L05770)%2C pcaC%2C 4-carboxymuconolactone decarboxylase. Highly similar to TR:O86608 (EMBL:AL031155) S.coelicolor probable 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (449 aa) (43.3%25 identity in 439 aa overlap) which contains an approx. 70 residue insertion between the two domains of homology to the Acinetobacter enzymes. An alternative start codon is present at codon 4. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=pcaL;product=3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase;protein_id=NP_630770.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7449651	7450271	.	-	.	ID=id8774;Dbxref=GeneID:1102136;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 79.40%2C E-value 7.6e-20;gbkey=misc_feature;gene=pcaL
NC_003888.3	RefSeq	gene	7450391	7451755	.	-	.	ID=gene6759;Dbxref=GeneID:1102137;Name=pcaB;gbkey=Gene;gene=pcaB;gene_biotype=protein_coding;gene_synonym=pcaB,SC4C6.08c;locus_tag=SCO6698
NC_003888.3	RefSeq	CDS	7450391	7451755	.	-	0	ID=cds6632;Parent=gene6759;Dbxref=Genbank:NP_630771.1,GeneID:1102137;Name=NP_630771.1;Note=SC4C6.08c%2C pcaB%2C probable 3-carboxy-cis%2Ccis-muconate cycloisomerase%2C len: 454 aa%3B similar to e.g. SW:PCAB_BRAJA (EMBL:Y10223)%2C pcaB%2C 3-carboxy-cis%2Ccis-muconate cycloisomerase (451 aa)%2C fasta scores%3B opt: 996 z-score: 1027.1 E(): 0%2C 43.3%25 identity in 448 aa overlap. Contains Pfam match to entry PF00206 lyase_1%2C Lyase and PS00163 Fumarate lyases signature;gbkey=CDS;gene=pcaB;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=NP_630771.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7450400	7450403	.	-	.	ID=id8775;Dbxref=GeneID:1102137;Note=possible RBS;gbkey=RBS;gene=pcaB
NC_003888.3	RefSeq	sequence_feature	7450742	7451422	.	-	.	ID=id8776;Dbxref=GeneID:1102137;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 102.40%2C E-value 8.3e-28;gbkey=misc_feature;gene=pcaB
NC_003888.3	RefSeq	sequence_feature	7450865	7450894	.	-	.	ID=id8777;Dbxref=GeneID:1102137;Note=PS00163 Fumarate lyases signature;gbkey=misc_feature;gene=pcaB
NC_003888.3	RefSeq	gene	7451752	7452357	.	-	.	ID=gene6760;Dbxref=GeneID:1102138;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;gene_synonym=pcaG,SC4C6.09c;locus_tag=SCO6699
NC_003888.3	RefSeq	CDS	7451752	7452357	.	-	0	ID=cds6633;Parent=gene6760;Dbxref=Genbank:NP_630772.1,GeneID:1102138;Name=NP_630772.1;Note=SC4C6.09c%2C pcaG%2C protocatechuate 3%2C4-dioxygenase alpha subunit%2C len: 201 aa%3B highly similar to pcaG (EMBL:AF109386) Streptomyces sp. 2065 protocatechuate 3%2C4-dioxygenase alpha subunit (201 aa)%2C fasta scores%3B opt: 1144 z-score: 1272.2 E(): 0%2C 80.1%25 identity in 201 aa overlap;gbkey=CDS;gene=pcaG;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=NP_630772.1;transl_table=11
NC_003888.3	RefSeq	gene	7452364	7453137	.	-	.	ID=gene6761;Dbxref=GeneID:1102139;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;gene_synonym=pcaH,SC4C6.10c;locus_tag=SCO6700
NC_003888.3	RefSeq	CDS	7452364	7453137	.	-	0	ID=cds6634;Parent=gene6761;Dbxref=Genbank:NP_630773.1,GeneID:1102139;Name=NP_630773.1;Note=SC4C6.10c%2C pcaH%2C protocatechuate 3%2C4-dioxygenase beta subunit%2C len: 257 aa%3B highly similar to pcaH (EMBL:AF109386) Streptomyces sp. 2065 protocatechuate 3%2C4-dioxygenase beta subunit (257 aa)%2C fasta scores%3B opt: 1686 z-score: 1951.2 E(): 0 91.1%25 identity in 257 aa overlap. Contains Pfam match to entry PF00775 Dioxygenase%2C Dioxygenase and PS00083 Intradiol ring-cleavage dioxygenases signature;gbkey=CDS;gene=pcaH;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=NP_630773.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7452421	7453092	.	-	.	ID=id8778;Dbxref=GeneID:1102139;Note=Pfam match to entry PF00775 Dioxygenase%2C Dioxygenase%2C score -66.50%2C E-value 6.9e-07;gbkey=misc_feature;gene=pcaH
NC_003888.3	RefSeq	sequence_feature	7452760	7452846	.	-	.	ID=id8779;Dbxref=GeneID:1102139;Note=PS00083 Intradiol ring-cleavage dioxygenases signature;gbkey=misc_feature;gene=pcaH
NC_003888.3	RefSeq	gene	7453156	7454358	.	-	.	ID=gene6762;Dbxref=GeneID:1102140;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;gene_synonym=pcaF,SC4C6.11c;locus_tag=SCO6701
NC_003888.3	RefSeq	CDS	7453156	7454358	.	-	0	ID=cds6635;Parent=gene6762;Dbxref=Genbank:NP_630774.1,GeneID:1102140;Name=NP_630774.1;Note=SC4C6.11c%2C pcaF%2C beta-ketoadipyl-CoA thiolase%2C len: 400 aa%3B highly similar to pcaF (EMBL:AF117893) Streptomyces sp. 2065 beta-ketoadipyl-CoA thiolase (400 aa)%2C fasta scores%3B opt: 2314 z-score: 2497.6 E(): 0%2C 87.4%25 identity in 397 aa overlap. Highly similar others from S.coelicolor e.g. (EMBL:AL049587)%2C SC5F2A.14%2C S.coelicolor probable thiolase (404 aa) (40.2%25 identity in 423 aa overlap). Contains Pfam match to entry PF00108 thiolase%2C Thiolase%2C PS00099 Thiolases active site%2C PS00098 Thiolases acyl-enzyme intermediate signature and PS00737 Thiolases signature 2;gbkey=CDS;gene=pcaF;product=beta-ketoadipyl-CoA thiolase;protein_id=NP_630774.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7453159	7454358	.	-	.	ID=id8780;Dbxref=GeneID:1102140;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2C score 533.80%2C E-value 1.2e-156;gbkey=misc_feature;gene=pcaF
NC_003888.3	RefSeq	sequence_feature	7453174	7453215	.	-	.	ID=id8781;Dbxref=GeneID:1102140;Note=PS00099 Thiolases active site;gbkey=misc_feature;gene=pcaF
NC_003888.3	RefSeq	sequence_feature	7453270	7453320	.	-	.	ID=id8782;Dbxref=GeneID:1102140;Note=PS00737 Thiolases signature 2;gbkey=misc_feature;gene=pcaF
NC_003888.3	RefSeq	sequence_feature	7454047	7454103	.	-	.	ID=id8783;Dbxref=GeneID:1102140;Note=PS00098 Thiolases acyl-enzyme intermediate signature;gbkey=misc_feature;gene=pcaF
NC_003888.3	RefSeq	gene	7454355	7455008	.	-	.	ID=gene6763;Dbxref=GeneID:1102141;Name=pcaJ;gbkey=Gene;gene=pcaJ;gene_biotype=protein_coding;gene_synonym=pcaJ,SC4C6.12c;locus_tag=SCO6702
NC_003888.3	RefSeq	CDS	7454355	7455008	.	-	0	ID=cds6636;Parent=gene6763;Dbxref=Genbank:NP_630775.1,GeneID:1102141;Name=NP_630775.1;Note=SC4C6.12c%2C pcaJ%2C probable 3-oxoadipate CoA-transferase subunit B%2C len: 217 aa%3B highly similar to many CoA transferases e.g. SW:PCAJ_PSEPU (EMBL:M88763)%2C PcaJ%2C Pseudomonas putida 3-oxoadipate CoA-transferase subunit B (212 aa)%2C fasta scores%3B opt: 684 z-score: 774.2 E(): 0%2C 52.9%25 identity in 206 aa overlap. Highly similar to SW:SCOB_MYCTU (EMBL:Z95556)%2C ScoB%2C Mycobacterium tuberculosis probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (218 aa) (73.9%25 identity in 207 aa overlap). Contains Pfam match to entry PF01144 CoA_trans%2C Coenzyme A transferase;gbkey=CDS;gene=pcaJ;product=3-oxoadipate CoA-transferase subunit B;protein_id=NP_630775.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7454366	7454370	.	-	.	ID=id8784;Dbxref=GeneID:1102141;Note=possible RBS;gbkey=RBS;gene=pcaJ
NC_003888.3	RefSeq	sequence_feature	7454400	7454999	.	-	.	ID=id8785;Dbxref=GeneID:1102141;Note=Pfam match to entry PF01144 CoA_trans%2C Coenzyme A transferase%2C score 354.50%2C E-value 1.2e-102;gbkey=misc_feature;gene=pcaJ
NC_003888.3	RefSeq	gene	7455008	7455790	.	-	.	ID=gene6764;Dbxref=GeneID:1102142;Name=pcaI;gbkey=Gene;gene=pcaI;gene_biotype=protein_coding;gene_synonym=pcaI,SC4C6.13c;locus_tag=SCO6703
NC_003888.3	RefSeq	CDS	7455008	7455790	.	-	0	ID=cds6637;Parent=gene6764;Dbxref=Genbank:NP_630776.1,GeneID:1102142;Name=NP_630776.1;Note=SC4C6.13c%2C pcaI%2C probable 3-oxoadipate CoA-transferase subunit A%2C len: 260 aa%3B highly similar to many CoA transferases e.g. SW:PCAI_PSEPU (EMBL:M88763)%2C pcaI%2C Pseudomonas putida 3-oxoadipate CoA-transferase subunit A (231 aa)%2C fasta scores%3B opt: 337 z-score: 379.8 E(): 8e-14%2C 42.6%25 identity in 242 aa overlap. Highly similar to SW:SCOA_MYCTU (EMBL:Z95556)%2C scoA%2C Mycobacterium tuberculosis probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (248 aa) (69.9%25 identity in 249 aa overlap). Contains Pfam match to entry PF01144 CoA_trans%2C Coenzyme A transferase and PS01273 CoA transferases signature 1;gbkey=CDS;gene=pcaI;product=3-oxoadipate CoA-transferase subunit A;protein_id=NP_630776.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7455086	7455784	.	-	.	ID=id8786;Dbxref=GeneID:1102142;Note=Pfam match to entry PF01144 CoA_trans%2C Coenzyme A transferase%2C score 293.60%2C E-value 2.4e-84;gbkey=misc_feature;gene=pcaI
NC_003888.3	RefSeq	repeat_region	7455452	7455484	.	+	.	ID=id8787;Note=repeat 4%3B 33 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	7455695	7455742	.	-	.	ID=id8788;Dbxref=GeneID:1102142;Note=PS01273 CoA transferases signature 1;gbkey=misc_feature;gene=pcaI
NC_003888.3	RefSeq	gene	7456000	7456464	.	+	.	ID=gene6765;Dbxref=GeneID:1102143;Name=SC4C6.14;gbkey=Gene;gene=SC4C6.14;gene_biotype=protein_coding;gene_synonym=SC4C6.14;locus_tag=SCO6704
NC_003888.3	RefSeq	CDS	7456000	7456464	.	+	0	ID=cds6638;Parent=gene6765;Dbxref=Genbank:NP_630777.1,GeneID:1102143;Name=NP_630777.1;Note=SC4C6.14%2C possible transcriptional regulator%2C len: 154 aa%3B similar to e.g. SW:MEXR_PSEAE (EMBL:U23763)%2C MexR%2C Pseudomonas aeruginosa multidrug resistance operon repressor (147 aa)%2C fasta scores%3B opt: 180 z-score: 234.3 E(): 1e-05%2C 30.7%25 identity in 114 aa overlap. C-terminal half shows highest similarity with other transcriptional regulators. C-terminal half similar to others from S. coelicolor e.g. TR:O86554 (EMBL:AL031350) S. coelicolor hypothetical protein (143 aa) (31.6%25 identity in 98 aa overlap). Could be a divergently-transcribed transcriptional regulator for the pca operon upstream of this CDS (very hypothetical). Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SC4C6.14;product=transcriptional regulator;protein_id=NP_630777.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7456096	7456407	.	+	.	ID=id8789;Dbxref=GeneID:1102143;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 72.40%2C E-value 9.5e-18;gbkey=misc_feature;gene=SC4C6.14
NC_003888.3	RefSeq	gene	7456480	7457457	.	-	.	ID=gene6766;Dbxref=GeneID:1102144;Name=SC4C6.15c;gbkey=Gene;gene=SC4C6.15c;gene_biotype=protein_coding;gene_synonym=SC4C6.15c;locus_tag=SCO6705
NC_003888.3	RefSeq	CDS	7456480	7457457	.	-	0	ID=cds6639;Parent=gene6766;Dbxref=Genbank:NP_630778.1,GeneID:1102144;Name=NP_630778.1;Note=SC4C6.15c%2C probable hypothetical protein%2C len: 325 aa%3B similar to TR:O30567 (EMBL:AF011544)%2C yecC%2C Bacillus subtilis hypothetical protein (331 aa)%2C fasta scores%3B opt: 278 z-score: 312.3 E(): 4.6e-10%2C 25.9%25 identity in 305 aa overlap. Also similar to yerB%2C which is identical to yecC. Contains a probable N-terminal signal sequence;gbkey=CDS;gene=SC4C6.15c;product=hypothetical protein;protein_id=NP_630778.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7457095	7457127	.	-	.	ID=id8790;Dbxref=GeneID:1102144;Note=repeat 4%3B 33 bp imperfect inverted repeat;gbkey=repeat_region;gene=SC4C6.15c
NC_003888.3	RefSeq	ribosome_entry_site	7457652	7457656	.	+	.	ID=id8791;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	7457668	7458858	.	+	.	ID=gene6767;Dbxref=GeneID:1102145;Name=SC4C6.16;gbkey=Gene;gene=SC4C6.16;gene_biotype=protein_coding;gene_synonym=SC4C6.16;locus_tag=SCO6706
NC_003888.3	RefSeq	CDS	7457668	7458858	.	+	0	ID=cds6640;Parent=gene6767;Dbxref=Genbank:NP_630779.1,GeneID:1102145;Name=NP_630779.1;Note=SC4C6.16%2C probable glutathione-dependent aldehyde dehydrogenase%2C len: 396 aa%3B similar to many e.g. SW:FADH_METMR (EMBL:L33464)%2C fdh%2C Methylobacter marinus glutathione-dependent formaldehyde dehydrogenase (424 aa)%2C fasta scores%3B opt: 1126 z-score: 1211.8 E(): 0%2C 44.1%25 identity in 406 aa overlap. Similar to (EMBL:AL049485)%2C SC6A5.31c%2C S.coelicolor probable zinc-binding alcohol dehydrogenase (363 aa) (31.0%25 identity in 316 aa overlap). Contains Pfam match to entry PF00107%2C adh_zinc%2C Zinc-binding dehydrogenases and PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=CDS;gene=SC4C6.16;product=glutathione-dependent aldehyde dehydrogenase;protein_id=NP_630779.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7457671	7458852	.	+	.	ID=id8792;Dbxref=GeneID:1102145;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 108.90%2C E-value 1e-28;gbkey=misc_feature;gene=SC4C6.16
NC_003888.3	RefSeq	sequence_feature	7457842	7457886	.	+	.	ID=id8793;Dbxref=GeneID:1102145;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=SC4C6.16
NC_003888.3	RefSeq	repeat_region	7458294	7458340	.	+	.	ID=id8794;Dbxref=GeneID:1102145;Note=repeat 5%3B 47 bp imperfect inverted repeat;gbkey=repeat_region;gene=SC4C6.16
NC_003888.3	RefSeq	gene	7458874	7459941	.	-	.	ID=gene6768;Dbxref=GeneID:1102146;Name=ligC;gbkey=Gene;gene=ligC;gene_biotype=protein_coding;gene_synonym=SC4C6.17c;locus_tag=SCO6707
NC_003888.3	RefSeq	CDS	7458874	7459941	.	-	0	ID=cds6641;Parent=gene6768;Dbxref=Genbank:NP_630780.1,GeneID:1102146;Name=NP_630780.1;Note=catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA%3B in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth;gbkey=CDS;gene=ligC;product=ATP-dependent DNA ligase;protein_id=NP_630780.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7459105	7459920	.	-	.	ID=id8795;Dbxref=GeneID:1102146;Note=Pfam match to entry PF01068 DNA_ligase%2C DNA ligase%2C score 95.70%2C E-value 9e-25;gbkey=misc_feature;gene=ligC
NC_003888.3	RefSeq	repeat_region	7459719	7459765	.	-	.	ID=id8796;Dbxref=GeneID:1102146;Note=repeat 5%3B 47 bp imperfect inverted repeat;gbkey=repeat_region;gene=ligC
NC_003888.3	RefSeq	sequence_feature	7459837	7459863	.	-	.	ID=id8797;Dbxref=GeneID:1102146;Note=PS00697 ATP-dependent DNA ligase AMP-binding site;gbkey=misc_feature;gene=ligC
NC_003888.3	RefSeq	ribosome_entry_site	7460145	7460148	.	+	.	ID=id8798;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	7460154	7460492	.	+	.	ID=gene6769;Dbxref=GeneID:1102147;Name=SC4C6.18;gbkey=Gene;gene=SC4C6.18;gene_biotype=protein_coding;gene_synonym=SC4C6.18;locus_tag=SCO6708
NC_003888.3	RefSeq	CDS	7460154	7460492	.	+	0	ID=cds6642;Parent=gene6769;Dbxref=Genbank:NP_630781.1,GeneID:1102147;Name=NP_630781.1;Note=SC4C6.18%2C possible membrane protein%2C len: 112 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame plot and amino acid composition. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC4C6.18;product=hypothetical protein;protein_id=NP_630781.1;transl_table=11
NC_003888.3	RefSeq	gene	7460584	7461609	.	+	.	ID=gene6770;Dbxref=GeneID:1102148;Name=SC4C6.19;gbkey=Gene;gene=SC4C6.19;gene_biotype=protein_coding;gene_synonym=SC4C6.19;locus_tag=SCO6709
NC_003888.3	RefSeq	CDS	7460584	7461609	.	+	0	ID=cds6643;Parent=gene6770;Dbxref=Genbank:NP_630782.1,GeneID:1102148;Name=NP_630782.1;Note=SC4C6.19%2C conserved hypothetical protein%2C len: 341 aa%3B similar to hypothetical proteins from Mycobacterium tuberculosis%2C Mycobacterium leprae and Bacillus subtilis e.g. TR:O69697 (EMBL:AL02212) Mycobacterium tuberculosis hypothetical protein (346 aa)%2C fasta scores%3B opt: 1313 z-score: 1504.6 E(): 0%2C 59.2%25 identity in 336 aa overlap. Similarity is confined to the N-terminal end in cases where the similar protein is longer then this one e.g. TR:O05865 (EMBL:Z95209) Mycobacterium tuberculosis hypothetical protein (759 aa) (28.3%25 identity in 336 aa overlap). Also similar to SC1E6.07 (EMBL:AL033505) S.coelicolor hypothetical protein (319 aa) (35.8%25 identity in 288 aa overlap);gbkey=CDS;gene=SC4C6.19;product=hypothetical protein;protein_id=NP_630782.1;transl_table=11
NC_003888.3	RefSeq	gene	7461626	7463815	.	-	.	ID=gene6771;Dbxref=GeneID:1102149;Name=SC4C6.20c;gbkey=Gene;gene=SC4C6.20c;gene_biotype=protein_coding;gene_synonym=SC4C6.20c;locus_tag=SCO6710
NC_003888.3	RefSeq	CDS	7461626	7463815	.	-	0	ID=cds6644;Parent=gene6771;Dbxref=Genbank:NP_630783.1,GeneID:1102149;Name=NP_630783.1;gbkey=CDS;gene=SC4C6.20c;product=glycosyl hydrolase;protein_id=NP_630783.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7462543	7463384	.	-	.	ID=id8799;Dbxref=GeneID:1102149;Note=repeat 6%3B 3x approx. 280 bp degenerate direct repeats;gbkey=repeat_region;gene=SC4C6.20c
NC_003888.3	RefSeq	sequence_feature	7463399	7463488	.	-	.	ID=id8800;Dbxref=GeneID:1102149;Note=Pfam match to entry PF00127 copper-bind%2C Copper binding proteins%2C plastocyanin/azurin family%2C score 21.50%2C E-value 9.2e-05;gbkey=misc_feature;gene=SC4C6.20c
NC_003888.3	RefSeq	gene	7463830	7466175	.	-	.	ID=gene6772;Dbxref=GeneID:1102150;Name=SC4C6.21c;gbkey=Gene;gene=SC4C6.21c;gene_biotype=protein_coding;gene_synonym=SC4C6.21c;locus_tag=SCO6711
NC_003888.3	RefSeq	CDS	7463830	7466175	.	-	0	ID=cds6645;Parent=gene6772;Dbxref=Genbank:NP_630784.1,GeneID:1102150;Name=NP_630784.1;Note=SC4C6.21c%2C hypothetical protein%2C len: 781 aa%3B unknown function%2C C-terminal half similar to N-terminal region of TR:O69947 (EMBL:AL023862) S.coelicolor hypothetical protein (1238 aa)%2C fasta scores%3B opt: 818 z-score: 850.9 E(): 0%2C 38.5%25 identity in 535 aa overlap. The downstream ORF SC4C6.20c has weak similarity to the C-terminal half of this hypothetical protein;gbkey=CDS;gene=SC4C6.21c;product=hypothetical protein;protein_id=NP_630784.1;transl_table=11
NC_003888.3	RefSeq	gene	7466508	7467539	.	+	.	ID=gene6773;Dbxref=GeneID:1102151;Name=SC4C6.22;gbkey=Gene;gene=SC4C6.22;gene_biotype=protein_coding;gene_synonym=SC4C6.22;locus_tag=SCO6712
NC_003888.3	RefSeq	CDS	7466508	7467539	.	+	0	ID=cds6646;Parent=gene6773;Dbxref=Genbank:NP_630785.1,GeneID:1102151;Name=NP_630785.1;Note=SC4C6.22%2C possible copper oxidase%2C len: 343 aa%3B weakly similar to members of the multicopper oxidase family e.g. to the N-terminus of SW:COPA_PSESM (EMBL:M19930)%2C CopA%2C Pseudomonas syringae copper resistance protein A precursor (609 aa)%2C fasta scores%3B opt: 170 z-score: 188.4 E(): 0.0036%2C 27.3%25 identity in 205 aa overlap. Also weakly similar to the blood coagulation factors which are structurally related to the multicopper oxidases. Similar to the N-terminus of TR:O53858 (EMBL:AL022004) Mycobacterium tuberculosis hypothetical protein (504 aa) (25.1%25 identity in 323 aa overlap). Contains PS00079 Multicopper oxidases signature 1 and PS00080 Multicopper oxidases signature 2 (the latter suggesting copper-binding);gbkey=CDS;gene=SC4C6.22;product=copper oxidase;protein_id=NP_630785.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7466971	7466994	.	+	.	ID=id8801;Dbxref=GeneID:1102151;Note=repeat 7%3B 23 bp imperfect inverted repeat;gbkey=repeat_region;gene=SC4C6.22
NC_003888.3	RefSeq	sequence_feature	7467351	7467413	.	+	.	ID=id8802;Dbxref=GeneID:1102151;Note=PS00079 Multicopper oxidases signature 1;gbkey=misc_feature;gene=SC4C6.22
NC_003888.3	RefSeq	sequence_feature	7467366	7467401	.	+	.	ID=id8803;Dbxref=GeneID:1102151;Note=PS00080 Multicopper oxidases signature 2;gbkey=misc_feature;gene=SC4C6.22
NC_003888.3	RefSeq	gene	7467726	7468784	.	+	.	ID=gene6774;Dbxref=GeneID:1102152;Name=SC4C6.23;gbkey=Gene;gene=SC4C6.23;gene_biotype=protein_coding;gene_synonym=SC4C6.23;locus_tag=SCO6713
NC_003888.3	RefSeq	CDS	7467726	7468784	.	+	0	ID=cds6647;Parent=gene6774;Dbxref=Genbank:NP_630786.1,GeneID:1102152;Name=NP_630786.1;Note=SC4C6.23%2C probable lacI-family transcriptional regulator%2C len: 352 aa%3B similar to many e.g. TR:O87590 (EMBL:AF086819)%2C CelR%2C Thermomonospora fusca transcriptional regulator of cellulase genes (340 aa)%2C fasta scores%3B opt: 991 z-score: 1119.2 E(): 0%2C 51.9%25 identity in 324 aa overlap. Similar to others from S. coelicolor e.g. TR:O86795 (EMBL:AL031317) S. coelicolor transcriptional regulator (355 aa) (36.3%25 identity in 342 aa overlap). Contains Pfam matches to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family and to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family. Contains probable helix-turn-helix motif at aa 9-30 (Score 2307%2C +7.04 SD);gbkey=CDS;gene=SC4C6.23;product=transcriptional regulator;protein_id=NP_630786.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7467741	7467824	.	+	.	ID=id8804;Dbxref=GeneID:1102152;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 39.70%2C E-value 9.4e-10;gbkey=misc_feature;gene=SC4C6.23
NC_003888.3	RefSeq	sequence_feature	7467915	7468652	.	+	.	ID=id8805;Dbxref=GeneID:1102152;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and LacI family.%2C score 95.60%2C E-value 9.5e-25;gbkey=misc_feature;gene=SC4C6.23
NC_003888.3	RefSeq	repeat_region	7468538	7468561	.	-	.	ID=id8806;Note=repeat 7%3B 23 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7468890	7469681	.	-	.	ID=gene6775;Dbxref=GeneID:1102153;Name=SC4C6.24c;gbkey=Gene;gene=SC4C6.24c;gene_biotype=protein_coding;gene_synonym=SC4C6.24c;locus_tag=SCO6714
NC_003888.3	RefSeq	CDS	7468890	7469681	.	-	0	ID=cds6648;Parent=gene6775;Dbxref=Genbank:NP_630787.1,GeneID:1102153;Name=NP_630787.1;Note=SC4C6.24c%2C possible hydroxylase%2C len: 263 aa%3B similar to TR:Q55078 (EMBL:U50973) Streptomyces sp. strain C5 daunomycin C-14 hydroxylase (275 aa)%2C fasta scores%3B opt: 422 z-score: 482.3 E(): 1.5e-19%2C 38.5%25 identity in 273 aa overlap. Similar to TR:O50527 (EMBL:AL009204) S.coelicolor hypothetical protein (267 aa) (37.9%25 identity in 253 aa overlap) and to (EMBL:AL049863)%2C SC5H1.09c%2C S.coelicolor possible hydroxylase (265 aa) (35.7%25 identity in 258 aa overlap). Also similar to hypothetical proteins from Mycobacterium tuberculosis and to Mycobacterium tuberculosis 27.3 kDa MAb HBT7 reactive antigen (EMBL:AJ007737) (260 aa) (36.7%25 identity in 264 aa overlap);gbkey=CDS;gene=SC4C6.24c;product=hydroxylase;protein_id=NP_630787.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7469689	7469694	.	-	.	ID=id8807;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	7469875	7470120	.	+	.	ID=gene6776;Dbxref=GeneID:1102154;Name=SC4C6.25;gbkey=Gene;gene=SC4C6.25;gene_biotype=protein_coding;gene_synonym=SC4C6.25;locus_tag=SCO6715
NC_003888.3	RefSeq	CDS	7469875	7470120	.	+	0	ID=cds6649;Parent=gene6776;Dbxref=Genbank:NP_630788.1,GeneID:1102154;Name=NP_630788.1;Note=SC4C6.25%2C probable transcriptional regulator%2C len: 81 aa%2C similar to many transcriptional regulators (some ) from Streptomyces e.g. TR:Q53963 (EMBL:X62287)%2C WhiB%2C S.coelicolor transcriptional regulator essential for sporulation (87 aa)%2C fasta scores%3B opt: 336 z-score: 452.7 E(): 5.7e-18%2C 61.1%25 identity in 72 aa overlap. Also similar to e.g. TR:O69649 (EMBL:AL02212) Mycobacterium tuberculosis regulatory protein (100 aa) (40.0%25 identity in 75 aa overlap);gbkey=CDS;gene=SC4C6.25;product=transcriptional regulator;protein_id=NP_630788.1;transl_table=11
NC_003888.3	RefSeq	gene	7470453	7470647	.	+	.	ID=gene6777;Dbxref=GeneID:1102155;Name=SC4C6.26;gbkey=Gene;gene=SC4C6.26;gene_biotype=protein_coding;gene_synonym=SC4C6.26;locus_tag=SCO6716
NC_003888.3	RefSeq	CDS	7470453	7470647	.	+	0	ID=cds6650;Parent=gene6777;Dbxref=Genbank:NP_630789.1,GeneID:1102155;Name=NP_630789.1;Note=SC4C6.26%2C hypothetical protein%2C len: 64 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame plot and amino acid composition;gbkey=CDS;gene=SC4C6.26;product=hypothetical protein;protein_id=NP_630789.1;transl_table=11
NC_003888.3	RefSeq	gene	7470692	7471678	.	-	.	ID=gene6778;Dbxref=GeneID:1102156;Name=SC4C6.27c;gbkey=Gene;gene=SC4C6.27c;gene_biotype=protein_coding;gene_synonym=SC4C6.27c;locus_tag=SCO6717
NC_003888.3	RefSeq	CDS	7470692	7471678	.	-	0	ID=cds6651;Parent=gene6778;Dbxref=Genbank:NP_630790.1,GeneID:1102156;Name=NP_630790.1;Note=SC4C6.27c%2C probable acyl-[acyl-carrier protein] desaturase%2C len: 328 aa%3B similar to many e.g. SW:STAD_LINUS (EMBL:X70962) Linum usitatissimum stearoyl-ACP desaturase (396 aa)%2C fasta scores%3B opt: 385 z-score: 461.5 E(): 2.2e-18%2C 30.2%25 identity in 311 aa overlap. The N-terminal 100 aa are divergent. Highest similarity to TR:Q50050 (EMBL:U15182)%2C aadX%2C Mycobacterium leprae protein (338 aa) (45.5%25 identity in 325 aa overlap) and TR:Q50824 (EMBL:AL022004)%2C des%2C Mycobacterium tuberculosis protein (338 aa) (46.1%25 identity in 323 aa overlap). Contains TTA (leucine) codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC4C6.27c;product=acyl-ACP desaturase;protein_id=NP_630790.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7471670	7471672	.	-	.	ID=id8808;Dbxref=GeneID:1102156;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SC4C6.27c
NC_003888.3	RefSeq	gene	7471875	7472651	.	-	.	ID=gene6779;Dbxref=GeneID:1102157;Name=ddah;gbkey=Gene;gene=ddah;gene_biotype=protein_coding;gene_synonym=ddah,SC5F2A.01c;locus_tag=SCO6718
NC_003888.3	RefSeq	CDS	7471875	7472651	.	-	0	ID=cds6652;Parent=gene6779;Dbxref=Genbank:NP_630791.1,GeneID:1102157;Name=NP_630791.1;Note=SC5F2A.01c%2C ddah%2C dimethylarginine dimethylaminohydrolase%2C len: 258 aa%3B hydrolyses asymmetrically methylated arginine with preference for dimethylated arginine over monomethylated arginine (experimental). Similar to TR:D1038106 (EMBL:AB001915) NG%2CNG-dimethylarginine dimethylaminohydrolase from Homo sapiens (285 aa) fasta scores%3B opt: 323%2C z-score: 384.7%2C E(): 4.1e-14%2C (35.7%25 identity in 272 aa overlap).;gbkey=CDS;gene=ddah;product=dimethylarginine dimethylaminohydrolase;protein_id=NP_630791.1;transl_table=11
NC_003888.3	RefSeq	gene	7472768	7475026	.	-	.	ID=gene6780;Dbxref=GeneID:1102158;Name=SC5F2A.02c;gbkey=Gene;gene=SC5F2A.02c;gene_biotype=protein_coding;gene_synonym=SC5F2A.02c;locus_tag=SCO6719
NC_003888.3	RefSeq	CDS	7472768	7475026	.	-	0	ID=cds6653;Parent=gene6780;Dbxref=Genbank:NP_630792.1,GeneID:1102158;Name=NP_630792.1;Note=SC5F2A.02c%2C UvrA-like ABC transporter%2C len: 752 aa%3B similar to many egs. TR:O86699 (EMBL:AL031515) UvrA-like protein from Streptomyces coelicolor (796 aa) fasta scores%3B opt: 2047%2C z-score: 2164.0%2C E(): 0%2C (51.9%25 identity in 776 aa overlap) and SW:UVRA_ECOLI UvrA%2C excinuclease ABC subunit A from Escherichia coli (940 aa) fasta scores%3B opt: 634%2C z-score: 669.2%2C E(): 5.8e-30%2C (33.9%25 identity in 938 aa overlap). Contains two Pfam matches to entry PF00005 ABC_tran%2C ABC transporter and two Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC5F2A.02c;product=UvrA-like ABC transporter;protein_id=NP_630792.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7472882	7473595	.	-	.	ID=id8809;Dbxref=GeneID:1102158;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 101.40%2C E-value 1.7e-26.;gbkey=misc_feature;gene=SC5F2A.02c
NC_003888.3	RefSeq	sequence_feature	7473551	7473574	.	-	.	ID=id8810;Dbxref=GeneID:1102158;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC5F2A.02c
NC_003888.3	RefSeq	sequence_feature	7473794	7474954	.	-	.	ID=id8811;Dbxref=GeneID:1102158;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 35.60%2C E-value 4e-08.;gbkey=misc_feature;gene=SC5F2A.02c
NC_003888.3	RefSeq	sequence_feature	7474910	7474933	.	-	.	ID=id8812;Dbxref=GeneID:1102158;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC5F2A.02c
NC_003888.3	RefSeq	gene	7475037	7476671	.	-	.	ID=gene6781;Dbxref=GeneID:1102159;Name=SC5F2A.03c;gbkey=Gene;gene=SC5F2A.03c;gene_biotype=protein_coding;gene_synonym=SC5F2A.03c;locus_tag=SCO6720
NC_003888.3	RefSeq	CDS	7475037	7476671	.	-	0	ID=cds6654;Parent=gene6781;Dbxref=Genbank:NP_630793.1,GeneID:1102159;Name=NP_630793.1;Note=SC5F2A.03c%2C probable ABC transporter%2C len: 544aa%3B similar to many involved in antibiotic resistance egs. TR:Q54381 (EMBL:X79146) from the lincomycin-production gene cluster of Streptomyces lincolnensis 78-11 (578 aa) fasta scores%3B opt: 1624%2C z-score: 1696.3%2C E(): 0%2C (50.3%25 identity in 541 aa overlap). Contains two Pfam matches to entry PF00005 ABC_tran%2C ABC transporter%2C two Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and Prosite match to PS00211 ABC transporters family signature. Also contains a possible coiled-coil region around 250aa.;gbkey=CDS;gene=SC5F2A.03c;product=ABC transporter;protein_id=NP_630793.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7475082	7475579	.	-	.	ID=id8813;Dbxref=GeneID:1102159;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 122.30%2C E-value 9e-33;gbkey=misc_feature;gene=SC5F2A.03c
NC_003888.3	RefSeq	sequence_feature	7475535	7475558	.	-	.	ID=id8814;Dbxref=GeneID:1102159;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC5F2A.03c
NC_003888.3	RefSeq	sequence_feature	7476024	7476575	.	-	.	ID=id8815;Dbxref=GeneID:1102159;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 143.80%2C E-value 3.1e-39;gbkey=misc_feature;gene=SC5F2A.03c
NC_003888.3	RefSeq	sequence_feature	7476195	7476239	.	-	.	ID=id8816;Dbxref=GeneID:1102159;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC5F2A.03c
NC_003888.3	RefSeq	sequence_feature	7476531	7476554	.	-	.	ID=id8817;Dbxref=GeneID:1102159;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC5F2A.03c
NC_003888.3	RefSeq	gene	7476734	7477642	.	+	.	ID=gene6782;Dbxref=GeneID:1102160;Name=SC5F2A.04;gbkey=Gene;gene=SC5F2A.04;gene_biotype=protein_coding;gene_synonym=SC5F2A.04;locus_tag=SCO6721
NC_003888.3	RefSeq	CDS	7476734	7477642	.	+	0	ID=cds6655;Parent=gene6782;Dbxref=Genbank:NP_630794.1,GeneID:1102160;Name=NP_630794.1;Note=SC5F2A.04%2C possible integral membrane protein%2C len: 302aa%3B contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC5F2A.04;product=hypothetical protein;protein_id=NP_630794.1;transl_table=11
NC_003888.3	RefSeq	gene	7477705	7478121	.	-	.	ID=gene6783;Dbxref=GeneID:1102161;Name=SC5F2A.05c;gbkey=Gene;gene=SC5F2A.05c;gene_biotype=protein_coding;gene_synonym=SC5F2A.05c;locus_tag=SCO6722
NC_003888.3	RefSeq	CDS	7477705	7478121	.	-	0	ID=cds6656;Parent=gene6783;Dbxref=Genbank:NP_630795.1,GeneID:1102161;Name=NP_630795.1;Note=SC5F2A.05c%2C possible regulator%2C len: 138aa%3B similar to TR:P95753 (EMBL:D50051) SsgA protein associated with sporulation and cell division in Streptomyces griseus (136 aa) fasta scores%3B opt: 233%2C z-score: 312.5%2C E(): 4.3e-10%2C (33.9%25 identity in 115 aa overlap).;gbkey=CDS;gene=SC5F2A.05c;product=regulator;protein_id=NP_630795.1;transl_table=11
NC_003888.3	RefSeq	gene	7478448	7479494	.	+	.	ID=gene6784;Dbxref=GeneID:1102162;Name=SC5F2A.06;gbkey=Gene;gene=SC5F2A.06;gene_biotype=protein_coding;gene_synonym=SC5F2A.06;locus_tag=SCO6723
NC_003888.3	RefSeq	CDS	7478448	7479494	.	+	0	ID=cds6657;Parent=gene6784;Dbxref=Genbank:NP_630796.1,GeneID:1102162;Name=NP_630796.1;Note=SC5F2A.06%2C possible oxidoreductase (hypothetical protein)%2C len: 348 aa%3B weakly similar to many eg. SW:MQO_ECOLI probable malate:quinone oxidoreductase from Escherichia coli (548 aa) fasta scores%3B opt: 114%2C z-score: 126.7%2C E(): 9.7%2C (30.3%25 identity in 119 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F2A.06;product=oxidoreductase;protein_id=NP_630796.1;transl_table=11
NC_003888.3	RefSeq	gene	7479567	7479896	.	+	.	ID=gene6785;Dbxref=GeneID:1102163;Name=SC5F2A.07;gbkey=Gene;gene=SC5F2A.07;gene_biotype=protein_coding;gene_synonym=SC5F2A.07;locus_tag=SCO6724
NC_003888.3	RefSeq	CDS	7479567	7479896	.	+	0	ID=cds6658;Parent=gene6785;Dbxref=Genbank:NP_630797.1,GeneID:1102163;Name=NP_630797.1;Note=SC5F2A.07%2C unknown%2C len: 109 aa;gbkey=CDS;gene=SC5F2A.07;product=hypothetical protein;protein_id=NP_630797.1;transl_table=11
NC_003888.3	RefSeq	gene	7479906	7480202	.	-	.	ID=gene6786;Dbxref=GeneID:1102164;Name=SC5F2A.08c;gbkey=Gene;gene=SC5F2A.08c;gene_biotype=protein_coding;gene_synonym=SC5F2A.08c;locus_tag=SCO6725
NC_003888.3	RefSeq	CDS	7479906	7480202	.	-	0	ID=cds6659;Parent=gene6786;Dbxref=Genbank:NP_630798.1,GeneID:1102164;Name=NP_630798.1;Note=SC5F2A.08c%2C unknown%2C len: 98 aa%3B similar to TR:P73587 (EMBL:D90907) hypothetical protein from Synechocystis sp. PCC6803 (89 aa) fasta scores%3B opt: 99%2C z-score: 148.0%2C E(): 0.62%2C (31.8%25 identity in 88 aa overlap).;gbkey=CDS;gene=SC5F2A.08c;product=hypothetical protein;protein_id=NP_630798.1;transl_table=11
NC_003888.3	RefSeq	gene	7480244	7480945	.	+	.	ID=gene6787;Dbxref=GeneID:1102165;Name=SC5F2A.09;gbkey=Gene;gene=SC5F2A.09;gene_biotype=protein_coding;gene_synonym=SC5F2A.09;locus_tag=SCO6726
NC_003888.3	RefSeq	CDS	7480244	7480945	.	+	0	ID=cds6660;Parent=gene6787;Dbxref=Genbank:NP_630799.1,GeneID:1102165;Name=NP_630799.1;Note=SC5F2A.09%2C possible endonuclease%2C len: 233aa%3B similar to SW:NFI_ECOLI endonuclease V from Escherichia coli (223 aa) fasta scores%3B opt: 468%2C z-score: 541.7%2C E(): 7.4e-23%2C (38.6%25 identity in 215 aa overlap).;gbkey=CDS;gene=SC5F2A.09;product=endonuclease;protein_id=NP_630799.1;transl_table=11
NC_003888.3	RefSeq	gene	7480933	7481103	.	-	.	ID=gene6788;Dbxref=GeneID:1102166;Name=SC5F2A.10c;gbkey=Gene;gene=SC5F2A.10c;gene_biotype=protein_coding;gene_synonym=SC5F2A.10c;locus_tag=SCO6727
NC_003888.3	RefSeq	CDS	7480933	7481103	.	-	0	ID=cds6661;Parent=gene6788;Dbxref=Genbank:NP_630800.1,GeneID:1102166;Name=NP_630800.1;Note=SC5F2A.10c%2C unknown%2C len: 56 aa;gbkey=CDS;gene=SC5F2A.10c;product=hypothetical protein;protein_id=NP_630800.1;transl_table=11
NC_003888.3	RefSeq	gene	7481296	7481442	.	+	.	ID=gene6789;Dbxref=GeneID:1102167;Name=SC5F2A.11;gbkey=Gene;gene=SC5F2A.11;gene_biotype=protein_coding;gene_synonym=SC5F2A.11;locus_tag=SCO6728
NC_003888.3	RefSeq	CDS	7481296	7481442	.	+	0	ID=cds6662;Parent=gene6789;Dbxref=Genbank:NP_630801.1,GeneID:1102167;Name=NP_630801.1;Note=SC5F2A.11%2C membrane protein%2C len: 48 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC5F2A.11;product=hypothetical protein;protein_id=NP_630801.1;transl_table=11
NC_003888.3	RefSeq	gene	7481508	7482698	.	-	.	ID=gene6790;Dbxref=GeneID:1102168;Name=SC5F2A.12c;gbkey=Gene;gene=SC5F2A.12c;gene_biotype=protein_coding;gene_synonym=SC5F2A.12c;locus_tag=SCO6729
NC_003888.3	RefSeq	CDS	7481508	7482698	.	-	0	ID=cds6663;Parent=gene6790;Dbxref=Genbank:NP_630802.1,GeneID:1102168;Name=NP_630802.1;Note=SC5F2A.12c%2C membrane protein%2C len: 396 aa%3B similar to many e.g. TR:O53176 (EMBL:AL021246) hypothetical protein from Mycobacterium tuberculosis (419 aa) fasta scores%3B opt: 528%2C z-score: 598.4%2C E(): 5.1e-26%2C (41.0%25 identity in 420 aa overlap). Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC5F2A.12c;product=hypothetical protein;protein_id=NP_630802.1;transl_table=11
NC_003888.3	RefSeq	gene	7482906	7484102	.	+	.	ID=gene6791;Dbxref=GeneID:1102169;Name=SC5F2A.13;gbkey=Gene;gene=SC5F2A.13;gene_biotype=protein_coding;gene_synonym=SC5F2A.13;locus_tag=SCO6730
NC_003888.3	RefSeq	CDS	7482906	7484102	.	+	0	ID=cds6664;Parent=gene6791;Dbxref=Genbank:NP_630803.1,GeneID:1102169;Name=NP_630803.1;Note=SC5F2A.13%2C possible racemase%2C len: 398aa%3B similar to many egs. TR:O06543 (EMBL:Z95584) hypothetical protein from Mycobacterium tuberculosis (360 aa) fasta scores%3B opt: 1338%2C z-score: 1408.4%2C E(): 0%2C (57.1%25 identity in 361 aa overlap) and TR:O09176 (EMBL:U89906) alpha-methylacyl-CoA racemase from Mus musculus (moues) (361 aa) fasta scores%3B opt: 953%2C z-score: 1005.2%2C E(): 0%2C (44.2%25 identity in 344 aa overlap). Also similar to SC6A5.34 (EMBL:AL049485) probable fatty acid co-A racemase from Streptomyces coelicolor (387 aa) fasta scores%3B opt: 1787%2C z-score: 1558.9%2C E(): 0%2C (69.9%25 identity in 382 aa overlap).;gbkey=CDS;gene=SC5F2A.13;product=racemase;protein_id=NP_630803.1;transl_table=11
NC_003888.3	RefSeq	gene	7484114	7485328	.	+	.	ID=gene6792;Dbxref=GeneID:1102170;Name=SC5F2A.14;gbkey=Gene;gene=SC5F2A.14;gene_biotype=protein_coding;gene_synonym=SC5F2A.14;locus_tag=SCO6731
NC_003888.3	RefSeq	CDS	7484114	7485328	.	+	0	ID=cds6665;Parent=gene6792;Dbxref=Genbank:NP_630804.1,GeneID:1102170;Name=NP_630804.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;gbkey=CDS;gene=SC5F2A.14;product=acetyl-CoA acetyltransferase;protein_id=NP_630804.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7484117	7485325	.	+	.	ID=id8818;Dbxref=GeneID:1102170;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2C score 408.70%2C E-value 5.3e-119;gbkey=misc_feature;gene=SC5F2A.14
NC_003888.3	RefSeq	sequence_feature	7485161	7485211	.	+	.	ID=id8819;Dbxref=GeneID:1102170;Note=PS00737 Thiolases signature 2.;gbkey=misc_feature;gene=SC5F2A.14
NC_003888.3	RefSeq	sequence_feature	7485266	7485307	.	+	.	ID=id8820;Dbxref=GeneID:1102170;Note=PS00099 Thiolases active site.;gbkey=misc_feature;gene=SC5F2A.14
NC_003888.3	RefSeq	gene	7485381	7487561	.	+	.	ID=gene6793;Dbxref=GeneID:1102171;Name=SC5F2A.15;gbkey=Gene;gene=SC5F2A.15;gene_biotype=protein_coding;gene_synonym=SC5F2A.15;locus_tag=SCO6732
NC_003888.3	RefSeq	CDS	7485381	7487561	.	+	0	ID=cds6666;Parent=gene6793;Dbxref=Genbank:NP_630805.1,GeneID:1102171;Name=NP_630805.1;Note=SC5F2A.15%2C possible fatty acid oxidative multifunctional enzyme%2C len: 726aa%3B similar to SW:FAOB_PSEFR fatty oxidation complex alpha subunit from Pseudomonas fragi (715 aa) fasta scores%3B opt: 1174%2C z-score: 1211.3%2C E(): 0%2C (33.2%25 identity in 717 aa overlap). Also similar to TR:O53872 (EMBL:AL022004) hypothetical protein from Mycobacterium tuberculosis (720 aa) fasta scores%3B opt: 3034%2C z-score: 3128.4%2C E(): 0%2C (64.3%25 identity in 717 aa overlap). Also similar to SC6A5.38 (EMBL:AL049485) possible fatty oxidation protein from Streptomyces coelicolor (733 aa) fasta scores%3B opt: 4069%2C z-score: 4004.0%2C E(): 0%2C (84.6%25 identity in 729 aa overlap). Contains Pfam matches to entries PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase and PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family and Prosite match to PS00923 Aspartate and glutamate racemases signature 1.;gbkey=CDS;gene=SC5F2A.15;product=fatty acid oxidative multifunctional enzyme;protein_id=NP_630805.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7485432	7485962	.	+	.	ID=id8821;Dbxref=GeneID:1102171;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 140.10%2C E-value 4e-38.;gbkey=misc_feature;gene=SC5F2A.15
NC_003888.3	RefSeq	sequence_feature	7486350	7487192	.	+	.	ID=id8822;Dbxref=GeneID:1102171;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C score 268.00%2C E-value 1.3e-76.;gbkey=misc_feature;gene=SC5F2A.15
NC_003888.3	RefSeq	sequence_feature	7486668	7486697	.	+	.	ID=id8823;Dbxref=GeneID:1102171;Note=PS00923 Aspartate and glutamate racemases signature 1.;gbkey=misc_feature;gene=SC5F2A.15
NC_003888.3	RefSeq	gene	7487571	7488326	.	-	.	ID=gene6794;Dbxref=GeneID:1102172;Name=SC5F2A.16c;gbkey=Gene;gene=SC5F2A.16c;gene_biotype=protein_coding;gene_synonym=SC5F2A.16c;locus_tag=SCO6733
NC_003888.3	RefSeq	CDS	7487571	7488326	.	-	0	ID=cds6667;Parent=gene6794;Dbxref=Genbank:NP_630806.1,GeneID:1102172;Name=NP_630806.1;Note=SC5F2A.16c%2C possible transcriptional regulator%2C len: 251aa%3B similar to many eg. SW:SOXR_PSEAE SoxR regulator of the superoxide response regulon (156 aa) fasta scores%3B opt: 181%2C z-score: 219.0%2C E(): 6.9e-05%2C (37.1%25 identity in 105 aa overlap). Contains probable helix-turn-helix motif (+3.41 SD) 28-49aa.;gbkey=CDS;gene=SC5F2A.16c;product=transcriptional regulator;protein_id=NP_630806.1;transl_table=11
NC_003888.3	RefSeq	gene	7488549	7490018	.	+	.	ID=gene6795;Dbxref=GeneID:1102173;Name=SC5F2A.17;gbkey=Gene;gene=SC5F2A.17;gene_biotype=protein_coding;gene_synonym=SC5F2A.17;locus_tag=SCO6734
NC_003888.3	RefSeq	CDS	7488549	7490018	.	+	0	ID=cds6668;Parent=gene6795;Dbxref=Genbank:NP_630807.1,GeneID:1102173;Name=NP_630807.1;Note=SC5F2A.17%2C probable amino acid permease%2C len: 489aa%3B similar to many especially SW:ANSP_SALTY AnsP%2C L-asparagine permease from Salmonella enterica (497 aa) fasta scores%3B opt: 1886%2C z-score: 2042.9%2C E(): 0%2C (58.6%25 identity in 476 aa overlap). Contains Pfam match to entry PF00324 aa_permeases%2C Amino acid permease and Prosite match to PS00218 Amino acid permeases signature. Also contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC5F2A.17;product=L-asparagine permease;protein_id=NP_630807.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7488636	7489967	.	+	.	ID=id8824;Dbxref=GeneID:1102173;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 516.40%2C E-value 2.1e-151.;gbkey=misc_feature;gene=SC5F2A.17
NC_003888.3	RefSeq	sequence_feature	7488735	7488827	.	+	.	ID=id8825;Dbxref=GeneID:1102173;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;gene=SC5F2A.17
NC_003888.3	RefSeq	gene	7490061	7490546	.	+	.	ID=gene6796;Dbxref=GeneID:1102174;Name=SC5F2A.18;gbkey=Gene;gene=SC5F2A.18;gene_biotype=protein_coding;gene_synonym=SC5F2A.18;locus_tag=SCO6735
NC_003888.3	RefSeq	CDS	7490061	7490546	.	+	0	ID=cds6669;Parent=gene6796;Dbxref=Genbank:NP_630808.1,GeneID:1102174;Name=NP_630808.1;Note=SC5F2A.18%2C unknown%2C len: 161 aa%3B some simlarity to SW:Y06D_BPT4 hypothetical protein from bacteriophage T4 (155 aa) fasta scores%3B opt: 135%2C z-score: 180.1%2C E(): 0.01%2C (20.9%25 identity in 158 aa overlap).;gbkey=CDS;gene=SC5F2A.18;product=hypothetical protein;protein_id=NP_630808.1;transl_table=11
NC_003888.3	RefSeq	gene	7490559	7492079	.	-	.	ID=gene6797;Dbxref=GeneID:1102175;Name=SC5F2A.19c;gbkey=Gene;gene=SC5F2A.19c;gene_biotype=protein_coding;gene_synonym=SC5F2A.19c;locus_tag=SCO6736
NC_003888.3	RefSeq	CDS	7490559	7492079	.	-	0	ID=cds6670;Parent=gene6797;Dbxref=Genbank:NP_630809.1,GeneID:1102175;Name=NP_630809.1;Note=SC5F2A.19c%2C possible metallopeptidase%2C len: 506aa%3B similar to many egs. TR:O69971 (EMBL:AL022268) proposed zinc metallopeptidase from Streptomyces coelicolor (512 aa) fasta scores%3B opt: 934%2C z-score: 1039.4%2C E(): 0%2C (36.3%25 identity in 509 aa overlap) and TR:G4063364 (EMBL:AF081952) from Thermoplasma acidophilum (780 aa) fasta scores%3B opt: 387%2C z-score: 428.8%2C E(): 1.4e-16%2C (28.2%25 identity in 447 aa overlap). Contains PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;gbkey=CDS;gene=SC5F2A.19c;product=metallopeptidase;protein_id=NP_630809.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7491084	7491113	.	-	.	ID=id8826;Dbxref=GeneID:1102175;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;gbkey=misc_feature;gene=SC5F2A.19c
NC_003888.3	RefSeq	gene	7492215	7492493	.	+	.	ID=gene6798;Dbxref=GeneID:1102176;Name=SC5F2A.20;gbkey=Gene;gene=SC5F2A.20;gene_biotype=protein_coding;gene_synonym=SC5F2A.20;locus_tag=SCO6737
NC_003888.3	RefSeq	CDS	7492215	7492493	.	+	0	ID=cds6671;Parent=gene6798;Dbxref=Genbank:NP_630810.1,GeneID:1102176;Name=NP_630810.1;Note=SC5F2A.20%2C small proline-rich protein%2C len: 92 aa;gbkey=CDS;gene=SC5F2A.20;product=hypothetical protein;protein_id=NP_630810.1;transl_table=11
NC_003888.3	RefSeq	gene	7492490	7493788	.	+	.	ID=gene6799;Dbxref=GeneID:1102177;Name=SC5F2A.21;gbkey=Gene;gene=SC5F2A.21;gene_biotype=protein_coding;gene_synonym=SC5F2A.21;locus_tag=SCO6738
NC_003888.3	RefSeq	CDS	7492490	7493788	.	+	0	ID=cds6672;Parent=gene6799;Dbxref=Genbank:NP_630811.1,GeneID:1102177;Name=NP_630811.1;Note=SC5F2A.21%2C possible carboxypeptidase (hypothetical protein)%2C len: 432 aa%3B weak similarity to many e.g. SW:CBPS_STRCP zinc carboxypeptidase from Streptomyces capreolus (434 aa) fasta scores%3B opt: 153%2C z-score: 178.1%2C E(): 0.013%2C (23.5%25 identity in 136 aa overlap). Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F2A.21;product=carboxypeptidase;protein_id=NP_630811.1;transl_table=11
NC_003888.3	RefSeq	gene	7493869	7495605	.	+	.	ID=gene6800;Dbxref=GeneID:1102178;Name=SC5F2A.22;gbkey=Gene;gene=SC5F2A.22;gene_biotype=protein_coding;gene_synonym=SC5F2A.22;locus_tag=SCO6739
NC_003888.3	RefSeq	CDS	7493869	7495605	.	+	0	ID=cds6673;Parent=gene6800;Dbxref=Genbank:NP_630812.1,GeneID:1102178;Name=NP_630812.1;Note=SC5F2A.22%2C probable BCCT family transporter%2C len: 578aa%3B similar to many eg. SW:OPUD_BACSU glycine/betaine transporter%2C OpuD from Bacillus subtilis (512 aa) fasta scores%3B opt: 1414%2C z-score: 1650.4%2C E(): 0%2C (43.9%25 identity in 492 aa overlap). Contains Prosite match to PS01303 BCCT family of transporters signature. Also contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC5F2A.22;product=BCCT family transporter;protein_id=NP_630812.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7494898	7494927	.	+	.	ID=id8827;Dbxref=GeneID:1102178;Note=PS01303 BCCT family of transporters signature.;gbkey=misc_feature;gene=SC5F2A.22
NC_003888.3	RefSeq	gene	7495638	7496600	.	-	.	ID=gene6801;Dbxref=GeneID:1102179;Name=SC5F2A.23c;gbkey=Gene;gene=SC5F2A.23c;gene_biotype=protein_coding;gene_synonym=SC5F2A.23c;locus_tag=SCO6740
NC_003888.3	RefSeq	CDS	7495638	7496600	.	-	0	ID=cds6674;Parent=gene6801;Dbxref=Genbank:NP_630813.1,GeneID:1102179;Name=NP_630813.1;Note=SC5F2A.23c%2C probable D-amino acid oxidase ()%2C len: 320 aa%3B similar to many both prokaryote and eukaryote egs. TR:O33145 (EMBL:AJ000521) D-amino acid oxidase from Mycobacterium tuberculosis (320 aa) fasta scores%3B opt: 805%2C z-score: 892.7%2C E(): 0%2C (43.4%25 identity in 316 aa overlap) and SW:OXDD_HUMAN D-aspartate oxidase from Homo sapiens (341 aa) fasta scores%3B opt: 548%2C z-score: 609.9%2C E(): 1.2e-26%2C (36.4%25 identity in 327 aa overlap). Contains Pfam match to entry PF01266 DAO%2C D-amino acid oxidase and Prosite match to PS00677 D-amino acid oxidases signature. Also contains probable N-terminal signal sequence.;gbkey=CDS;gene=SC5F2A.23c;product=D-amino acid oxidase;protein_id=NP_630813.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7495641	7496570	.	-	.	ID=id8828;Dbxref=GeneID:1102179;Note=Pfam match to entry PF01266 DAO%2C D-amino acid oxidase%2C score 160.50%2C E-value 2.8e-44.;gbkey=misc_feature;gene=SC5F2A.23c
NC_003888.3	RefSeq	sequence_feature	7495665	7495721	.	-	.	ID=id8829;Dbxref=GeneID:1102179;Note=PS00677 D-amino acid oxidases signature.;gbkey=misc_feature;gene=SC5F2A.23c
NC_003888.3	RefSeq	gene	7496667	7497704	.	+	.	ID=gene6802;Dbxref=GeneID:1102180;Name=SC5F2A.24;gbkey=Gene;gene=SC5F2A.24;gene_biotype=protein_coding;gene_synonym=SC5F2A.24;locus_tag=SCO6741
NC_003888.3	RefSeq	CDS	7496667	7497704	.	+	0	ID=cds6675;Parent=gene6802;Dbxref=Genbank:NP_630814.1,GeneID:1102180;Name=NP_630814.1;Note=SC5F2A.24%2C possible oxidoreductase%2C len: 345aa%3B similar to SW:KAS2_STRGA beta-ketoacyl synthase from Streptomyces glaucescens (409 aa) fasta scores%3B opt: 131%2C z-score: 153.7%2C E(): 0.3%2C (29.9%25 identity in 251 aa overlap).;gbkey=CDS;gene=SC5F2A.24;product=oxidoreductase;protein_id=NP_630814.1;transl_table=11
NC_003888.3	RefSeq	gene	7497718	7499361	.	+	.	ID=gene6803;Dbxref=GeneID:1102181;Name=SC5F2A.25;gbkey=Gene;gene=SC5F2A.25;gene_biotype=protein_coding;gene_synonym=SC5F2A.25;locus_tag=SCO6742
NC_003888.3	RefSeq	CDS	7497718	7499361	.	+	0	ID=cds6676;Parent=gene6803;Dbxref=Genbank:NP_630815.1,GeneID:1102181;Name=NP_630815.1;Note=SC5F2A.25%2C probable ABC transporter%2C len: 547aa%3B similar to many eg. TR:Q53912 (EMBL:X84374) Ard1%2C ABC transporter which confers resistance to the aminonucleoside antibiotic A201A in Streptomyces capreolus (558 aa) fasta scores%3B opt: 1561%2C z-score: 1661.3%2C E(): 0%2C (46.7%25 identity in 542 aa overlap). Contains two Pfam matches to entry PF00005 ABC_tran%2C ABC transporter%2C two Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and Prosite match to PS00211 ABC transporters family signature.;gbkey=CDS;gene=SC5F2A.25;product=ABC transporter ATP-binding protein;protein_id=NP_630815.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7497805	7498410	.	+	.	ID=id8830;Dbxref=GeneID:1102181;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 159.10%2C E-value 7.4e-44.;gbkey=misc_feature;gene=SC5F2A.25
NC_003888.3	RefSeq	sequence_feature	7497826	7497849	.	+	.	ID=id8831;Dbxref=GeneID:1102181;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC5F2A.25
NC_003888.3	RefSeq	sequence_feature	7498192	7498236	.	+	.	ID=id8832;Dbxref=GeneID:1102181;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC5F2A.25
NC_003888.3	RefSeq	sequence_feature	7498843	7499340	.	+	.	ID=id8833;Dbxref=GeneID:1102181;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 97.30%2C E-value 3.1e-25.;gbkey=misc_feature;gene=SC5F2A.25
NC_003888.3	RefSeq	sequence_feature	7498864	7498887	.	+	.	ID=id8834;Dbxref=GeneID:1102181;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC5F2A.25
NC_003888.3	RefSeq	gene	7499508	7501850	.	-	.	ID=gene6804;Dbxref=GeneID:1102182;Name=SC5F2A.26c;gbkey=Gene;gene=SC5F2A.26c;gene_biotype=protein_coding;gene_synonym=SC5F2A.26c;locus_tag=SCO6743
NC_003888.3	RefSeq	CDS	7499508	7501850	.	-	0	ID=cds6677;Parent=gene6804;Dbxref=Genbank:NP_630816.1,GeneID:1102182;Name=NP_630816.1;Note=SC5F2A.26c%2C possible transcriptional accessory protein%2C len: 780aa%3B similar to SW:TEX_BORPE Tex%2C transcriptional accessory protein (exact function not known) from Bordetella pertussis (791 aa) fasta scores%3B opt: 2905%2C z-score: 2938.8%2C E(): 0%2C (59.5%25 identity in 781 aa overlap). Also similar to hypothetical proteins eg. SW:YHGF_ECOLI from Escherichia coli fasta scores%3B opt: 2888%2C z-score: 2922.0%2C E(): 0%2C (61.2%25 identity in 744 aa overlap). Contains Pfam match to entry PF00575 S1%2C S1 RNA binding domain.;gbkey=CDS;gene=SC5F2A.26c;product=transcriptional accessory protein;protein_id=NP_630816.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7499685	7499906	.	-	.	ID=id8835;Dbxref=GeneID:1102182;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 83.10%2C E-value 5.6e-21.;gbkey=misc_feature;gene=SC5F2A.26c
NC_003888.3	RefSeq	gene	7501897	7502100	.	+	.	ID=gene6805;Dbxref=GeneID:1102183;Name=SC5F2A.27;gbkey=Gene;gene=SC5F2A.27;gene_biotype=protein_coding;gene_synonym=SC5F2A.27;locus_tag=SCO6744
NC_003888.3	RefSeq	CDS	7501897	7502100	.	+	0	ID=cds6678;Parent=gene6805;Dbxref=Genbank:NP_630817.1,GeneID:1102183;Name=NP_630817.1;Note=SC5F2A.27%2C unknown%2C len: 67 aa;gbkey=CDS;gene=SC5F2A.27;product=hypothetical protein;protein_id=NP_630817.1;transl_table=11
NC_003888.3	RefSeq	gene	7502204	7503082	.	-	.	ID=gene6806;Dbxref=GeneID:1102184;Name=SC5F2A.28c;gbkey=Gene;gene=SC5F2A.28c;gene_biotype=protein_coding;gene_synonym=SC5F2A.28c;locus_tag=SCO6745
NC_003888.3	RefSeq	CDS	7502204	7503082	.	-	0	ID=cds6679;Parent=gene6806;Dbxref=Genbank:NP_630818.1,GeneID:1102184;Name=NP_630818.1;Note=SC5F2A.28c%2C alanine-rich hypothetical protein%2C len: 292 aa%3B similar to TR:Q9AK27 (EMBL:AL589164) Streptomyces coelicolor hypothetical protein 2SCK8.25%2C 292 aa%3B fasta scores: opt: 716 Z-score: 806.0 E(): 2.9e-37%3B 44.891%25 identity in 274 aa overlap;gbkey=CDS;gene=SC5F2A.28c;product=hypothetical protein;protein_id=NP_630818.1;transl_table=11
NC_003888.3	RefSeq	gene	7503189	7504166	.	+	.	ID=gene6807;Dbxref=GeneID:1102185;Name=SC5F2A.29;gbkey=Gene;gene=SC5F2A.29;gene_biotype=protein_coding;gene_synonym=SC5F2A.29;locus_tag=SCO6746
NC_003888.3	RefSeq	CDS	7503189	7504166	.	+	0	ID=cds6680;Parent=gene6807;Dbxref=Genbank:NP_630819.1,GeneID:1102185;Name=NP_630819.1;Note=SC5F2A.29%2C possible transcriptional regulator%2C len: 325aa%3B similar to many eg. TR:O30507 (EMBL:AF008308) arginine regulatory protein ArgR%2C from Pseudomonas aeruginosa (328 aa) fasta scores%3B opt: 288%2C z-score: 331.0%2C E(): 4e-11%2C (24.7%25 identity in 308 aa overlap). Also similar to TR:Q43970 (EMBL:Z48959) AraC-like protein from Azorhizobium caulinodans (227 aa) fasta scores%3B opt: 605%2C z-score: 689.7%2C E(): 4.2e-31%2C (47.4%25 identity in 192 aa overlap). Contains Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family.;gbkey=CDS;gene=SC5F2A.29;product=transcriptional regulator;protein_id=NP_630819.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7503885	7504145	.	+	.	ID=id8836;Dbxref=GeneID:1102185;Note=Pfam match to entry PF00165 HTH_2%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 84.60%2C E-value 2e-21.;gbkey=misc_feature;gene=SC5F2A.29
NC_003888.3	RefSeq	gene	7504216	7504851	.	+	.	ID=gene6808;Dbxref=GeneID:1102186;Name=SC5F2A.30;gbkey=Gene;gene=SC5F2A.30;gene_biotype=protein_coding;gene_synonym=SC5F2A.30;locus_tag=SCO6747
NC_003888.3	RefSeq	CDS	7504216	7504851	.	+	0	ID=cds6681;Parent=gene6808;Dbxref=Genbank:NP_630820.1,GeneID:1102186;Name=NP_630820.1;Note=SC5F2A.30%2C unknown%2C len: 211aa%3B similar to TR:P71709 (EMBL:Z80775) hypothetical protein from Mycobacterium tuberculosis (187 aa) fasta scores%3B opt: 529%2C z-score: 638.6%2C E(): 2.9e-28%2C (49.5%25 identity in 182 aa overlap) and to TR:AAK44280 (EMBL:AE006918) Mycobacterium tuberculosis CDC1551 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis%2C MT0058%2C 212 aa%3B fasta scores: opt: 619 Z-score: 715.6 E(): 3.2e-32%3B 50.242%25 identity in 207 aa overlap;gbkey=CDS;gene=SC5F2A.30;product=hypothetical protein;protein_id=NP_630820.1;transl_table=11
NC_003888.3	RefSeq	gene	7504838	7505611	.	-	.	ID=gene6809;Dbxref=GeneID:1102187;Name=SC5F2A.31c;gbkey=Gene;gene=SC5F2A.31c;gene_biotype=protein_coding;gene_synonym=SC5F2A.31c;locus_tag=SCO6748
NC_003888.3	RefSeq	CDS	7504838	7505611	.	-	0	ID=cds6682;Parent=gene6809;Dbxref=Genbank:NP_630821.1,GeneID:1102187;Name=NP_630821.1;Note=SC5F2A.31c%2C possible enoyl coA hydratase%2C len: 257aa%3B similar to many proposed to be enoyl coA hydratase based on Pfam match eg. TR:P97087 (EMBL:Z92974) from Clostridium thermosaccharolyticum (259 aa) fasta scores%3B opt: 426%2C z-score: 496.6%2C E(): 2.4e-20%2C (31.2%25 identity in 247 aa overlap). Contains Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family.;gbkey=CDS;gene=SC5F2A.31c;product=enoyl CoA hydratase;protein_id=NP_630821.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7505060	7505554	.	-	.	ID=id8837;Dbxref=GeneID:1102187;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 103.60%2C E-value 3.8e-27.;gbkey=misc_feature;gene=SC5F2A.31c
NC_003888.3	RefSeq	gene	7505756	7506241	.	+	.	ID=gene6810;Dbxref=GeneID:1102188;Name=SC5F2A.32;gbkey=Gene;gene=SC5F2A.32;gene_biotype=protein_coding;gene_synonym=SC5F2A.32;locus_tag=SCO6749
NC_003888.3	RefSeq	CDS	7505756	7506241	.	+	0	ID=cds6683;Parent=gene6810;Dbxref=Genbank:NP_630822.1,GeneID:1102188;Name=NP_630822.1;Note=SC5F2A.32%2C unknown%2C len: 161 aa%3B similar to other hypothetical proteins egs. TR:O54111 (EMBL:AL021529) from Streptomyces coelicolor (171 aa) fasta scores%3B opt: 221%2C z-score: 281.8%2C E(): 2.2e-08%2C (35.8%25 identity in 137 aa overlap) and TR:O69204 (EMBL:U33059) Actinosynnema pretiosum auranticum (144 aa) fasta scores%3B opt: 220%2C z-score: 281.8%2C E(): 2.2e-08%2C (38.7%25 identity in 155 aa overlap).;gbkey=CDS;gene=SC5F2A.32;product=hypothetical protein;protein_id=NP_630822.1;transl_table=11
NC_003888.3	RefSeq	gene	7506308	7506901	.	-	.	ID=gene6811;Dbxref=GeneID:1102189;Name=SC5F2A.33c;gbkey=Gene;gene=SC5F2A.33c;gene_biotype=protein_coding;gene_synonym=SC5F2A.33c;locus_tag=SCO6750
NC_003888.3	RefSeq	CDS	7506308	7506901	.	-	0	ID=cds6684;Parent=gene6811;Dbxref=Genbank:NP_630823.1,GeneID:1102189;Name=NP_630823.1;Note=catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate;gbkey=CDS;gene=SC5F2A.33c;product=isopentenyl-diphosphate delta-isomerase;protein_id=NP_630823.1;transl_table=11
NC_003888.3	RefSeq	gene	7507178	7508116	.	-	.	ID=gene6812;Dbxref=GeneID:1102190;Name=SC5F2A.34c;gbkey=Gene;gene=SC5F2A.34c;gene_biotype=protein_coding;gene_synonym=SC5F2A.34c;locus_tag=SCO6751
NC_003888.3	RefSeq	CDS	7507178	7508116	.	-	0	ID=cds6685;Parent=gene6812;Dbxref=Genbank:NP_630824.1,GeneID:1102190;Name=NP_630824.1;Note=SC5F2A.34c%2C possible efflux protein%2C len: 312aa%3B similar to many eg. SW:CZCD_ALCSP cation efflux protein from Alcaligenes sp. (316 aa) fasta scores%3B opt: 834%2C z-score: 949.4%2C E(): 0%2C (47.0%25 identity in 300 aa overlap). Contains several probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC5F2A.34c;product=efflux protein;protein_id=NP_630824.1;transl_table=11
NC_003888.3	RefSeq	gene	7508594	7510411	.	+	.	ID=gene6813;Dbxref=GeneID:1102191;Name=SC5F2A.35;gbkey=Gene;gene=SC5F2A.35;gene_biotype=protein_coding;gene_synonym=SC5F2A.35,SC6A5.01;locus_tag=SCO6752
NC_003888.3	RefSeq	CDS	7508594	7510411	.	+	0	ID=cds6686;Parent=gene6813;Dbxref=Genbank:NP_733714.1,GeneID:1102191;Name=NP_733714.1;Note=SC6A5.01%2C partial CDS%2C possible integral membrane transferase%2C len: >490aa%3B similar to TR:O67379 (EMBL:AE000737) glucose-1-phosphate thymidylyltransferase from Aquifex aeolicus (428 aa) fasta scores%3B opt: 215%2C z-score: 245.5%2C E(): 2.2e-06%2C (26.2%25 identity in 210 aa overlap). Contains Prosite match to PS00379 CDP-alcohol phosphatidyltransferases signature and possible membrane spanning hydrophobic regions.~SC5F2A.35%2C partial CDS%2C possible transferase%2C len: >148aa%3B C-terminal region lies on cosmid 6A5 (EMBL:AL049485). Similar over a defined region to many proposed/hypothetical proteins eg. TR:O67379 (EMBL:AE000737) proposed glucose-1-phosphate thymidylyltransferase from Aquifex aeolicus (428 aa) fasta scores%3B opt: 215%2C z-score: 239.5%2C E(): 5e-06%2C (26.2%25 identity in 210 aa overlap). Contains Prosite match to PS00379 CDP-alcohol phosphatidyltransferases signature. Also contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC5F2A.35;product=integral membrane transferase;protein_id=NP_733714.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7508938	7509037	.	+	.	ID=id8838;Dbxref=GeneID:1102191;Note=Overlap with cosmid 6A5 (EMBL:AL049485);gbkey=misc_feature;gene=SC5F2A.35
NC_003888.3	RefSeq	sequence_feature	7509311	7509379	.	+	.	ID=id8839;Dbxref=GeneID:1102191;Note=PS00379 CDP-alcohol phosphatidyltransferases signature.;gbkey=misc_feature;gene=SC5F2A.35
NC_003888.3	RefSeq	gene	7510408	7511160	.	+	.	ID=gene6814;Dbxref=GeneID:1102192;Name=SC6A5.02;gbkey=Gene;gene=SC6A5.02;gene_biotype=protein_coding;gene_synonym=SC6A5.02;locus_tag=SCO6753
NC_003888.3	RefSeq	CDS	7510408	7511160	.	+	0	ID=cds6687;Parent=gene6814;Dbxref=Genbank:NP_630825.1,GeneID:1102192;Name=NP_630825.1;Note=SC6A5.02%2C probable nucleotide sugar-1-phosphate transferase%2C len: 250aa%3B similar to many eg. TR:O05171 (EMBL:Y11985) dNDP-glucose synthase from the avilamycin biosynthetic gene cluster of Streptomyces viridochromogenes Tu57 (355 aa) fasta scores%3B opt: 192%2C z-score: 226.4%2C E(): 2.6e-05. (26.9%25 identity in 242 aa overlap). Contains Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase.;gbkey=CDS;gene=SC6A5.02;product=nucleotide sugar-1-phosphate transferase;protein_id=NP_630825.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7510411	7511157	.	+	.	ID=id8840;Dbxref=GeneID:1102192;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase.;gbkey=misc_feature;gene=SC6A5.02
NC_003888.3	RefSeq	gene	7511187	7512209	.	+	.	ID=gene6815;Dbxref=GeneID:1102193;Name=SC6A5.03;gbkey=Gene;gene=SC6A5.03;gene_biotype=protein_coding;gene_synonym=SC6A5.03;locus_tag=SCO6754
NC_003888.3	RefSeq	CDS	7511187	7512209	.	+	0	ID=cds6688;Parent=gene6815;Dbxref=Genbank:NP_630826.1,GeneID:1102193;Name=NP_630826.1;Note=SC6A5.03%2C possible glycerol dehydrogenase%2C len: 340aa%3B similar to many eg. SW:GLDA_PSEPU glycerol dehydrogenase%2C GldA%2C from Pseudomonas putida (365 aa) fasta scores%3B opt: 261%2C z-score: 303.7%2C E(): 1.3e-09%2C (27.9%25 identity in 308 aa overlap).;gbkey=CDS;gene=SC6A5.03;product=glycerol dehydrogenase;protein_id=NP_630826.1;transl_table=11
NC_003888.3	RefSeq	gene	7512283	7512966	.	+	.	ID=gene6816;Dbxref=GeneID:1102194;Name=SC6A5.04;gbkey=Gene;gene=SC6A5.04;gene_biotype=protein_coding;gene_synonym=SC6A5.04;locus_tag=SCO6755
NC_003888.3	RefSeq	CDS	7512283	7512966	.	+	0	ID=cds6689;Parent=gene6816;Dbxref=Genbank:NP_630827.1,GeneID:1102194;Name=NP_630827.1;Note=SC6A5.04%2C possible integral membrane transferase%2C len: 227aa%3B similar to many eg. TR:O67379 (EMBL:AE000737) glucose-1-phophate thymidylyltransferase from Aquifex aeolicus (428 aa) fasta scores%3B opt: 206%2C z-score: 257.3%2C E(): 5e-07%2C (28.1%25 identity in 199 aa overlap). Contains possible membrane spanning hydrophobic region.;gbkey=CDS;gene=SC6A5.04;product=transferase;protein_id=NP_630827.1;transl_table=11
NC_003888.3	RefSeq	gene	7512975	7513847	.	+	.	ID=gene6817;Dbxref=GeneID:1102195;Name=SC6A5.05;gbkey=Gene;gene=SC6A5.05;gene_biotype=protein_coding;gene_synonym=SC6A5.05;locus_tag=SCO6756
NC_003888.3	RefSeq	CDS	7512975	7513847	.	+	0	ID=cds6690;Parent=gene6817;Dbxref=Genbank:NP_630828.1,GeneID:1102195;Name=NP_630828.1;Note=SC6A5.05%2C possible glycosyltransferase%2C len: 290aa%3B similar to many eg. TR:E1388141 (EMBL:AL035478) transferase from Streptomyces coelicolor (344 aa) fasta scores%3B opt: 202%2C z-score: 235.1%2C E(): 8.6e-06%2C (28.1%25 identity in 317 aa overlap). Contains Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases. Contains possible membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC6A5.05;product=glycosyltransferase;protein_id=NP_630828.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7512987	7513466	.	+	.	ID=id8841;Dbxref=GeneID:1102195;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferases.;gbkey=misc_feature;gene=SC6A5.05
NC_003888.3	RefSeq	gene	7513947	7514876	.	+	.	ID=gene6818;Dbxref=GeneID:1102196;Name=SC6A5.06;gbkey=Gene;gene=SC6A5.06;gene_biotype=protein_coding;gene_synonym=SC6A5.06;locus_tag=SCO6757
NC_003888.3	RefSeq	CDS	7513947	7514876	.	+	0	ID=cds6691;Parent=gene6818;Dbxref=Genbank:NP_630829.1,GeneID:1102196;Name=NP_630829.1;Note=SC6A5.06%2C probable ABC transporter membrane component%2C len: 309aa%3B similar to many eg. TR:O66230 (EMBL:AB010150) ABC transporter membrane component from Escherichia coli (264 aa) fasta scores%3B opt: 346%2C z-score: 414.3%2C E(): 8.9e-16%2C (27.3%25 identity in 267 aa overlap). Contains Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter%2C score 109.60%2C E-value 6.1e-29 and Prosite match to PS00211 ABC transporters family signature. Also contains probable membrane spanning hydrophobic regions.;gbkey=CDS;gene=SC6A5.06;product=ABC transporter membrane protein;protein_id=NP_630829.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7514082	7514867	.	+	.	ID=id8842;Dbxref=GeneID:1102196;Note=Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter%2C score 109.60%2C E-value 6.1e-29.;gbkey=misc_feature;gene=SC6A5.06
NC_003888.3	RefSeq	sequence_feature	7514793	7514837	.	+	.	ID=id8843;Dbxref=GeneID:1102196;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC6A5.06
NC_003888.3	RefSeq	gene	7514896	7515657	.	+	.	ID=gene6819;Dbxref=GeneID:1102197;Name=SC6A5.07;gbkey=Gene;gene=SC6A5.07;gene_biotype=protein_coding;gene_synonym=SC6A5.07;locus_tag=SCO6758
NC_003888.3	RefSeq	CDS	7514896	7515657	.	+	0	ID=cds6692;Parent=gene6819;Dbxref=Genbank:NP_630830.1,GeneID:1102197;Name=NP_630830.1;Note=SC6A5.07%2C probable ABC transporter ATP-binding component%2C len: 253aa%3B similar to many eg. SW:TAGH_BACSU TagH%2C ABC transporter ATP-binding component from Bacillus subtilis (527 aa) fasta scores%3B opt: 621%2C z-score: 686.7%2C E(): 6e-31%2C (48.5%25 identity in 202 aa overlap). Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 123.70%2C E-value 3.4e-33 and Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature.;gbkey=CDS;gene=SC6A5.07;product=ABC transporter ATP-binding protein;protein_id=NP_630830.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7515073	7515591	.	+	.	ID=id8844;Dbxref=GeneID:1102197;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 123.70%2C E-value 3.4e-33.;gbkey=misc_feature;gene=SC6A5.07
NC_003888.3	RefSeq	sequence_feature	7515094	7515117	.	+	.	ID=id8845;Dbxref=GeneID:1102197;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC6A5.07
NC_003888.3	RefSeq	sequence_feature	7515364	7515408	.	+	.	ID=id8846;Dbxref=GeneID:1102197;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC6A5.07
NC_003888.3	RefSeq	gene	7516017	7516928	.	+	.	ID=gene6820;Dbxref=GeneID:1102198;Name=SC6A5.08;gbkey=Gene;gene=SC6A5.08;gene_biotype=protein_coding;gene_synonym=SC6A5.08;locus_tag=SCO6759
NC_003888.3	RefSeq	CDS	7516017	7516928	.	+	0	ID=cds6693;Parent=gene6820;Dbxref=Genbank:NP_630831.1,GeneID:1102198;Name=NP_630831.1;Note=SC6A5.08%2C probable phytoene synthase%2C len: 303aa%3B similar to many eg. TR:Q50892 (EMBL:Z21955) phytoene synthase from the light-induced carotenoid biosynthesis cluster of Myxococcus xanthus (336 aa) fasta scores%3B opt: 322%2C z-score: 379.7%2C E(): 7.5e-14%2C (31.8%25 identity in 274 aa overlap). Contains Pfam match to entry PF00494 SQS_PSY%2C Squalene and phytoene synthases%2C score 34.70%2C E-value 1.2e-08.;gbkey=CDS;gene=SC6A5.08;product=phytoene synthase;protein_id=NP_630831.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7516110	7516733	.	+	.	ID=id8847;Dbxref=GeneID:1102198;Note=Pfam match to entry PF00494 SQS_PSY%2C Squalene and phytoene synthases%2C score 34.70%2C E-value 1.2e-08.;gbkey=misc_feature;gene=SC6A5.08
NC_003888.3	RefSeq	gene	7516937	7517875	.	+	.	ID=gene6821;Dbxref=GeneID:1102199;Name=SC6A5.09;gbkey=Gene;gene=SC6A5.09;gene_biotype=protein_coding;gene_synonym=SC6A5.09;locus_tag=SCO6760
NC_003888.3	RefSeq	CDS	7516937	7517875	.	+	0	ID=cds6694;Parent=gene6821;Dbxref=Genbank:NP_630832.1,GeneID:1102199;Name=NP_630832.1;Note=SC6A5.09%2C probable phytoene synthase%2C len: 312aa%3B similar to many egs. SW:CRTB_MYCTU probable phytoene synthase from Mycobacterium tuberculosis (302 aa) fasta scores%3B opt: 791%2C z-score: 925.6%2C E(): 0%2C (48.3%25 identity in 286 aa overlap) and SW:PSY_ARATH phytoene synthase precusor from Arabidopsis thaliana (mouse ear cress) (423 aa) fasta scores%3B opt: 493%2C z-score: 577.3%2C E(): 7.4e-25%2C (34.4%25 identity in 282 aa overlap). Contains Pfam match to entry PF00494 SQS_PSY%2C Squalene and phytoene synthases%2C score 168.70%2C E-value 9.4e-47 and Prosite matches to PS01044 Squalene and phytoene synthases signature 1 and PS01045 Squalene and phytoene synthases signature 2.;gbkey=CDS;gene=SC6A5.09;product=phytoene synthase;protein_id=NP_630832.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7517000	7517836	.	+	.	ID=id8848;Dbxref=GeneID:1102199;Note=Pfam match to entry PF00494 SQS_PSY%2C Squalene and phytoene synthases%2C score 168.70%2C E-value 9.4e-47.;gbkey=misc_feature;gene=SC6A5.09
NC_003888.3	RefSeq	sequence_feature	7517345	7517392	.	+	.	ID=id8849;Dbxref=GeneID:1102199;Note=PS01044 Squalene and phytoene synthases signature 1.;gbkey=misc_feature;gene=SC6A5.09
NC_003888.3	RefSeq	sequence_feature	7517450	7517527	.	+	.	ID=id8850;Dbxref=GeneID:1102199;Note=PS01045 Squalene and phytoene synthases signature 2.;gbkey=misc_feature;gene=SC6A5.09
NC_003888.3	RefSeq	gene	7517875	7518033	.	+	.	ID=gene6822;Dbxref=GeneID:1102200;Name=SC6A5.10;gbkey=Gene;gene=SC6A5.10;gene_biotype=protein_coding;gene_synonym=SC6A5.10;locus_tag=SCO6761
NC_003888.3	RefSeq	CDS	7517875	7518033	.	+	0	ID=cds6695;Parent=gene6822;Dbxref=Genbank:NP_630833.1,GeneID:1102200;Name=NP_630833.1;Note=SC6A5.10%2C unknown%2C len: 52 aa%3B designated based upon Hidden-Markov Model and probable ribosome binding site.;gbkey=CDS;gene=SC6A5.10;product=hypothetical protein;protein_id=NP_630833.1;transl_table=11
NC_003888.3	RefSeq	gene	7518030	7519466	.	+	.	ID=gene6823;Dbxref=GeneID:1102201;Name=SC6A5.11;gbkey=Gene;gene=SC6A5.11;gene_biotype=protein_coding;gene_synonym=SC6A5.11;locus_tag=SCO6762
NC_003888.3	RefSeq	CDS	7518030	7519466	.	+	0	ID=cds6696;Parent=gene6823;Dbxref=Genbank:NP_630834.1,GeneID:1102201;Name=NP_630834.1;Note=SC6A5.11%2C possible phytoene dehydrogenase%2C len: 478aa%3B similar to many from eukaryotes eg. SW:CRTI_CAPAN phytoene dehydrogenase precursor from Capsicum annuum (bell pepper) (582 aa) fasta scores%3B opt: 276%2C z-score: 302.1%2C E(): 1.6e-09%2C (24.0%25 identity in 459 aa overlap). Also similar to prokaryotes eg. TR:P72449 (EMBL:X95596) proposed dehydrogenase from a cryptic carotenoid biosynthesis cluster in Streptomyces griseus (517 aa) fasta scores%3B opt: 206%2C z-score: 226.8%2C E(): 2.5e-05%2C (29.7%25 identity in 512 aa overlap);gbkey=CDS;gene=SC6A5.11;product=phytoene dehydrogenase;protein_id=NP_630834.1;transl_table=11
NC_003888.3	RefSeq	gene	7519463	7520599	.	+	.	ID=gene6824;Dbxref=GeneID:1102202;Name=SC6A5.12;gbkey=Gene;gene=SC6A5.12;gene_biotype=protein_coding;gene_synonym=SC6A5.12;locus_tag=SCO6763
NC_003888.3	RefSeq	CDS	7519463	7520599	.	+	0	ID=cds6697;Parent=gene6824;Dbxref=Genbank:NP_630835.1,GeneID:1102202;Name=NP_630835.1;Note=SC6A5.12%2C probable polyprenyl synthatase%2C len: 378aa%3B similar to many eg. SW:GGPP_MYCTU probable geranylgeranyl pyrophosphate synthatase from Mycobacterium tuberculosis (359 aa) fasta scores%3B opt: 1103%2C z-score: 1231.0%2C E(): 0%2C (49.3%25 identity in 355 aa overlap) and SW:IDSA_METTM short chain isoprenyl diphosphate synthase from Methanobacterium thermoautotrophicum (324 aa) fasta scores%3B opt: 547%2C z-score: 614.0%2C E(): 6.7e-27%2C (38.2%25 identity in 293 aa overlap). Contains Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetases%2C score 176.70%2C E-value 3.9e-49 and Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop)%2C PS00723 Polyprenyl synthetases signature 1 and PS00606 Beta-ketoacyl synthases active site.;gbkey=CDS;gene=SC6A5.12;product=polyprenyl synthatase;protein_id=NP_630835.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7519502	7519525	.	+	.	ID=id8851;Dbxref=GeneID:1102202;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC6A5.12
NC_003888.3	RefSeq	sequence_feature	7519685	7520452	.	+	.	ID=id8852;Dbxref=GeneID:1102202;Note=Pfam match to entry PF00348 polyprenyl_synt%2C Polyprenyl synthetases%2C score 176.70%2C E-value 3.9e-49.;gbkey=misc_feature;gene=SC6A5.12
NC_003888.3	RefSeq	sequence_feature	7519835	7519879	.	+	.	ID=id8853;Dbxref=GeneID:1102202;Note=PS00723 Polyprenyl synthetases signature 1.;gbkey=misc_feature;gene=SC6A5.12
NC_003888.3	RefSeq	sequence_feature	7520105	7520155	.	+	.	ID=id8854;Dbxref=GeneID:1102202;Note=PS00606 Beta-ketoacyl synthases active site.;gbkey=misc_feature;gene=SC6A5.12
NC_003888.3	RefSeq	gene	7520716	7522758	.	+	.	ID=gene6825;Dbxref=GeneID:1102203;Name=SC6A5.13;gbkey=Gene;gene=SC6A5.13;gene_biotype=protein_coding;gene_synonym=SC6A5.13;locus_tag=SCO6764
NC_003888.3	RefSeq	CDS	7520716	7522758	.	+	0	ID=cds6698;Parent=gene6825;Dbxref=Genbank:NP_630836.1,GeneID:1102203;Name=NP_630836.1;Note=SC6A5.13%2C probable squalene-hopene cyclase%2C len: 680 aa%3B similar to many e.g. SW:SQHC_ALIAC squalene-hopene cyclase A key enzyme in triterpenoid metabolism in Bacillus acidocaldarius (630 aa) fasta scores%3B opt: 2153%2C z-score: 2386.3%2C E(): 0%2C (51.8%25 identity in 620 aa overlap). Contains two Pfam matches to entry PF00432 prenyltrans%2C Prenyltransferase and squalene oxidase repeats and a Prosite match to PS01074 Terpene synthases signature.;gbkey=CDS;gene=SC6A5.13;product=squalene-hopene cyclase;protein_id=NP_630836.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7522195	7522323	.	+	.	ID=id8855;Dbxref=GeneID:1102203;Note=Pfam match to entry PF00432 prenyltrans%2C Prenyltransferase and squalene oxidase repeats%2C score 29.90%2C E-value 5.7e-05.;gbkey=misc_feature;gene=SC6A5.13
NC_003888.3	RefSeq	sequence_feature	7522243	7522287	.	+	.	ID=id8856;Dbxref=GeneID:1102203;Note=PS01074 Terpene synthases signature.;gbkey=misc_feature;gene=SC6A5.13
NC_003888.3	RefSeq	sequence_feature	7522339	7522503	.	+	.	ID=id8857;Dbxref=GeneID:1102203;Note=Pfam match to entry PF00432 prenyltrans%2C Prenyltransferase and squalene oxidase repeats%2C score 35.30%2C E-value 1.4e-06.;gbkey=misc_feature;gene=SC6A5.13
NC_003888.3	RefSeq	gene	7522758	7523399	.	+	.	ID=gene6826;Dbxref=GeneID:1102204;Name=SC6A5.14;gbkey=Gene;gene=SC6A5.14;gene_biotype=protein_coding;gene_synonym=SC6A5.14;locus_tag=SCO6765
NC_003888.3	RefSeq	CDS	7522758	7523399	.	+	0	ID=cds6699;Parent=gene6826;Dbxref=Genbank:NP_630837.1,GeneID:1102204;Name=NP_630837.1;Note=SC6A5.14%2C possible lipoprotein%2C len: 213 aa%3B similar to SW:TYRT_STRLN proposed tyrosinase co-factor from the melanin biosynthesis in Streptomyces lincolnensis (140 aa) fasta scores%3B opt: 115%2C z-score: 142.8%2C E(): 1.2%2C (29.2%25 identity in 120 aa overlap). Contains Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC6A5.14;product=lipoprotein;protein_id=NP_630837.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7522767	7522799	.	+	.	ID=id8858;Dbxref=GeneID:1102204;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SC6A5.14
NC_003888.3	RefSeq	gene	7523406	7524428	.	+	.	ID=gene6827;Dbxref=GeneID:1102205;Name=SC6A5.15;gbkey=Gene;gene=SC6A5.15;gene_biotype=protein_coding;gene_synonym=SC6A5.15;locus_tag=SCO6766
NC_003888.3	RefSeq	CDS	7523406	7524428	.	+	0	ID=cds6700;Parent=gene6827;Dbxref=Genbank:NP_630838.1,GeneID:1102205;Name=NP_630838.1;Note=SC6A5.15%2C unknown%2C len: 340 aa%3B similar to many of undefined function e.g. TR:P95416 (EMBL:D84475) NirJ%2C from a locus for heme D1 biosynthesis in Pseudomonas aeruginosa (387 aa) fasta scores%3B opt: 222%2C z-score: 264.2%2C E(): 2.1e-07%2C (24.2%25 identity in 207 aa overlap).;gbkey=CDS;gene=SC6A5.15;product=hypothetical protein;protein_id=NP_630838.1;transl_table=11
NC_003888.3	RefSeq	gene	7524433	7525587	.	+	.	ID=gene6828;Dbxref=GeneID:1102206;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=SCO6767
NC_003888.3	RefSeq	CDS	7524433	7525587	.	+	0	ID=cds6701;Parent=gene6828;Dbxref=Genbank:NP_630839.1,GeneID:1102206;Name=NP_630839.1;Note=catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis;gbkey=CDS;gene=ispG;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=NP_630839.1;transl_table=11
NC_003888.3	RefSeq	gene	7525613	7527583	.	+	.	ID=gene6829;Dbxref=GeneID:1102207;Name=SC6A5.17;gbkey=Gene;gene=SC6A5.17;gene_biotype=protein_coding;gene_synonym=SC6A5.17;locus_tag=SCO6768
NC_003888.3	RefSeq	CDS	7525613	7527583	.	+	0	ID=cds6702;Parent=gene6829;Dbxref=Genbank:NP_630840.1,GeneID:1102207;Name=NP_630840.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=SC6A5.17;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=NP_630840.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7525697	7525756	.	+	.	ID=id8859;Dbxref=GeneID:1102207;Note=PS00801 Transketolase signature 1.;gbkey=misc_feature;gene=SC6A5.17
NC_003888.3	RefSeq	gene	7527584	7528969	.	+	.	ID=gene6830;Dbxref=GeneID:1102208;Name=SC6A5.18;gbkey=Gene;gene=SC6A5.18;gene_biotype=protein_coding;gene_synonym=SC6A5.18;locus_tag=SCO6769
NC_003888.3	RefSeq	CDS	7527584	7528969	.	+	0	ID=cds6703;Parent=gene6830;Dbxref=Genbank:NP_630841.1,GeneID:1102208;Name=NP_630841.1;Note=SC6A5.18%2C probable aminotransferase%2C len: 461 aa%3B similar to many e.g. SW:ARGD_BACSU acetylornithine aminotransferase from Bacillus subtilis (385 aa) fasta scores%3B opt: 663%2C z-score: 757.6%2C E(): 0%2C (37.8%25 identity in 341 aa overlap). Contains Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate and Prosite match to PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;gbkey=CDS;gene=SC6A5.18;product=aminotransferase;protein_id=NP_630841.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7527725	7528765	.	+	.	ID=id8860;Dbxref=GeneID:1102208;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 343.70%2C E-value 5.1e-119.;gbkey=misc_feature;gene=SC6A5.18
NC_003888.3	RefSeq	sequence_feature	7528280	7528396	.	+	.	ID=id8861;Dbxref=GeneID:1102208;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=SC6A5.18
NC_003888.3	RefSeq	gene	7529043	7529657	.	+	.	ID=gene6831;Dbxref=GeneID:1102209;Name=SC6A5.19;gbkey=Gene;gene=SC6A5.19;gene_biotype=protein_coding;gene_synonym=SC6A5.19;locus_tag=SCO6770
NC_003888.3	RefSeq	CDS	7529043	7529657	.	+	0	ID=cds6704;Parent=gene6831;Dbxref=Genbank:NP_630842.1,GeneID:1102209;Name=NP_630842.1;Note=SC6A5.19%2C probable DNA-binding protein%2C len: 204 aa%3B similar to several of undefined function eg. TR:O86784 (EMBL:AL031317) hypothetical protein from Streptomyces coelicolor (201 aa) fasta scores%3B opt: 297%2C z-score: 356.2%2C E(): 1.5e-12%2C (34.9%25 identity in 212 aa overlap). Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix.;gbkey=CDS;gene=SC6A5.19;product=DNA-binding protein;protein_id=NP_630842.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7529100	7529264	.	+	.	ID=id8862;Dbxref=GeneID:1102209;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 52.80%2C E-value 7.6e-12.;gbkey=misc_feature;gene=SC6A5.19
NC_003888.3	RefSeq	gene	7529654	7529773	.	+	.	ID=gene6832;Dbxref=GeneID:1102210;Name=SC6A5.20;gbkey=Gene;gene=SC6A5.20;gene_biotype=protein_coding;gene_synonym=SC6A5.20;locus_tag=SCO6771
NC_003888.3	RefSeq	CDS	7529654	7529773	.	+	0	ID=cds6705;Parent=gene6832;Dbxref=Genbank:NP_630843.1,GeneID:1102210;Name=NP_630843.1;Note=SC6A5.20%2C possible small hydrophobic hypothetical protein%2C len: 39 aa%3B contains possible N-terminal signal sequence.;gbkey=CDS;gene=SC6A5.20;product=small hydrophobic hypothetical protein;protein_id=NP_630843.1;transl_table=11
NC_003888.3	RefSeq	gene	7529795	7530658	.	-	.	ID=gene6833;Dbxref=GeneID:1102211;Name=SC6A5.21c;gbkey=Gene;gene=SC6A5.21c;gene_biotype=protein_coding;gene_synonym=SC6A5.21c;locus_tag=SCO6772
NC_003888.3	RefSeq	CDS	7529795	7530658	.	-	0	ID=cds6706;Parent=gene6833;Dbxref=Genbank:NP_630844.1,GeneID:1102211;Name=NP_630844.1;Note=SC6A5.21c%2C unknown%2C len: 287aa%3B similar to TR:P96830 (EMBL:Z92770) hypothetical protein from Mycobacterium tuberculosis (276 aa) fasta scores%3B opt: 189%2C z-score: 220.4%2C E(): 5.6e-05%2C (32.3%25 identity in 279 aa overlap).;gbkey=CDS;gene=SC6A5.21c;product=hypothetical protein;protein_id=NP_630844.1;transl_table=11
NC_003888.3	RefSeq	gene	7531179	7532117	.	+	.	ID=gene6834;Dbxref=GeneID:1102212;Name=SC6A5.22;gbkey=Gene;gene=SC6A5.22;gene_biotype=protein_coding;gene_synonym=SC6A5.22;locus_tag=SCO6773
NC_003888.3	RefSeq	CDS	7531179	7532117	.	+	0	ID=cds6707;Parent=gene6834;Dbxref=Genbank:NP_630845.1,GeneID:1102212;Name=NP_630845.1;Note=SC6A5.22%2C possible  peptidase%2C len: 312aa%3B TR:E1355668 (EMBL:AL034355)  peptidase from Streptomyces coelicolor (349 aa) fasta scores%3B opt: 452%2C z-score: 416.6%2C E(): 6.6e-16%2C (34.5%25 identity in 319 aa overlap) and SW:ALE1_STACP glycylglycine endopeptidase from Staphylococcus capitis (362 aa) fasta scores%3B opt: 332%2C z-score: 309.4%2C E(): 6.2e-10%2C (35.2%25 identity in 196 aa overlap). Contains probable N-terminal signal sequence.;gbkey=CDS;gene=SC6A5.22;product=peptidase;protein_id=NP_630845.1;transl_table=11
NC_003888.3	RefSeq	gene	7532361	7533146	.	+	.	ID=gene6835;Dbxref=GeneID:1102213;Name=SC6A5.23;gbkey=Gene;gene=SC6A5.23;gene_biotype=protein_coding;gene_synonym=SC6A5.23;locus_tag=SCO6774
NC_003888.3	RefSeq	CDS	7532361	7533146	.	+	0	ID=cds6708;Parent=gene6835;Dbxref=Genbank:NP_630846.1,GeneID:1102213;Name=NP_630846.1;Note=SC6A5.23%2C unknown%2C len: 261aa%3B similar to TR:O07156 (EMBL:Z96801) hypothetical protein from Mycobacterium leprae (301 aa) fasta scores%3B opt: 496%2C z-score: 562.4%2C E(): 5e-24%2C (36.4%25 identity in 253 aa overlap);gbkey=CDS;gene=SC6A5.23;product=hypothetical protein;protein_id=NP_630846.1;transl_table=11
NC_003888.3	RefSeq	gene	7533249	7533869	.	-	.	ID=gene6836;Dbxref=GeneID:1102214;Name=SC6A5.24c;gbkey=Gene;gene=SC6A5.24c;gene_biotype=protein_coding;gene_synonym=SC6A5.24c;locus_tag=SCO6775
NC_003888.3	RefSeq	CDS	7533249	7533869	.	-	0	ID=cds6709;Parent=gene6836;Dbxref=Genbank:NP_630847.1,GeneID:1102214;Name=NP_630847.1;Note=SC6A5.24c%2C probable transcriptional regulator%2C len: 206 aa%3B similar to many e.g. TR:O86510 (EMBL:AL031124) transcriptional regulator from Streptomyces coelicolor (200 aa) fasta scores%3B opt: 328%2C z-score: 399.0%2C E(): 6.4e-15%2C (34.9%25 identity in 186 aa overlap) and SW:BETI_ECOLI regulatory protein BetI from the osmoregulatory choline-glycine/betaine pathway of Escherichia coli (195 aa) fasta scores%3B opt: 158%2C z-score: 198.8%2C E(): 0.0009%2C (25.0%25 identity in 180 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and probable helix-turn-helix (+3.31 SD) 32-53 aa;gbkey=CDS;gene=SC6A5.24c;product=transcriptional regulator;protein_id=NP_630847.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7533687	7533827	.	-	.	ID=id8863;Dbxref=GeneID:1102214;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 27.70%2C E-value 6e-06.;gbkey=misc_feature;gene=SC6A5.24c
NC_003888.3	RefSeq	gene	7534102	7535214	.	+	.	ID=gene6837;Dbxref=GeneID:1102215;Name=SC6A5.25;gbkey=Gene;gene=SC6A5.25;gene_biotype=protein_coding;gene_synonym=SC6A5.25;locus_tag=SCO6776
NC_003888.3	RefSeq	CDS	7534102	7535214	.	+	0	ID=cds6710;Parent=gene6837;Dbxref=Genbank:NP_630848.1,GeneID:1102215;Name=NP_630848.1;Note=SC6A5.25%2C unknown%2C len: 370 aa%3B similar to SW:YZ34_MYCTU hypothetical protein from Mycobacterium tuberculosis (372 aa) fasta scores%3B opt: 1125%2C z-score: 1301.0%2C E(): 0%2C (51.3%25 identity in 335 aa overlap). Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC6A5.25;product=hypothetical protein;protein_id=NP_630848.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7535158	7535181	.	+	.	ID=id8864;Dbxref=GeneID:1102215;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC6A5.25
NC_003888.3	RefSeq	gene	7535353	7536285	.	-	.	ID=gene6838;Dbxref=GeneID:1102216;Name=SC6A5.26c;gbkey=Gene;gene=SC6A5.26c;gene_biotype=protein_coding;gene_synonym=SC6A5.26c;locus_tag=SCO6777
NC_003888.3	RefSeq	CDS	7535353	7536285	.	-	0	ID=cds6711;Parent=gene6838;Dbxref=Genbank:NP_630849.1,GeneID:1102216;Name=NP_630849.1;Note=SC6A5.26c%2C possible beta-lactamase%2C len: 310 aa%3B similar to SW:BLA1_XANMA L1 metallo-beta-lactamase from Xanthomonas maltophilia (290 aa) fasta scores%3B opt: 161%2C z-score: 198.8%2C E(): 0.0009%2C (25.5%25 identity in 247 aa overlap).;gbkey=CDS;gene=SC6A5.26c;product=beta-lactamase;protein_id=NP_630849.1;transl_table=11
NC_003888.3	RefSeq	gene	7536362	7537048	.	-	.	ID=gene6839;Dbxref=GeneID:1102217;Name=SC6A5.27c;gbkey=Gene;gene=SC6A5.27c;gene_biotype=protein_coding;gene_synonym=SC6A5.27c;locus_tag=SCO6778
NC_003888.3	RefSeq	CDS	7536362	7537048	.	-	0	ID=cds6712;Parent=gene6839;Dbxref=Genbank:NP_630850.1,GeneID:1102217;Name=NP_630850.1;Note=SC6A5.27c%2C probable transcriptional regulator%2C len: 228 aa%3B similar to many e.g. TR:O86514 (EMBL:AL031124) transcriptional regulator (194 aa) fasta scores%3B opt: 159%2C z-score: 206.2%2C E(): 0.00035%2C (28.5%25 identity in 151 aa overlap) and TR:Q54288 (EMBL:X86780) regulator of antibiotic transport complexes in Streptomyces hygroscopicus (204 aa) fasta scores%3B opt: 125%2C z-score: 163.8%2C E(): 0.08%2C (30.0%25 identity in 70 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and probable helix-turn-helix (+5.96 SD) 45-66aa.;gbkey=CDS;gene=SC6A5.27c;product=transcriptional regulator;protein_id=NP_630850.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7536827	7536967	.	-	.	ID=id8865;Dbxref=GeneID:1102217;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 26.70%2C E-value 1.2e-05.;gbkey=misc_feature;gene=SC6A5.27c
NC_003888.3	RefSeq	gene	7537178	7537378	.	-	.	ID=gene6840;Dbxref=GeneID:1102218;Name=SC6A5.28c;gbkey=Gene;gene=SC6A5.28c;gene_biotype=protein_coding;gene_synonym=SC6A5.28c;locus_tag=SCO6779
NC_003888.3	RefSeq	CDS	7537178	7537378	.	-	0	ID=cds6713;Parent=gene6840;Dbxref=Genbank:NP_630851.1,GeneID:1102218;Name=NP_630851.1;Note=SC6A5.28c%2C unknown%2C len: 66 aa%3B designated based upon %25GC and frameplot.;gbkey=CDS;gene=SC6A5.28c;product=hypothetical protein;protein_id=NP_630851.1;transl_table=11
NC_003888.3	RefSeq	gene	7537508	7538713	.	+	.	ID=gene6841;Dbxref=GeneID:1102219;Name=SC6A5.29;gbkey=Gene;gene=SC6A5.29;gene_biotype=protein_coding;gene_synonym=SC6A5.29;locus_tag=SCO6780
NC_003888.3	RefSeq	CDS	7537508	7538713	.	+	0	ID=cds6714;Parent=gene6841;Dbxref=Genbank:NP_630852.1,GeneID:1102219;Name=NP_630852.1;Note=SC6A5.29%2C possible hypothetical protein%2C len: 401 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC6A5.29;product=hypothetical protein;protein_id=NP_630852.1;transl_table=11
NC_003888.3	RefSeq	gene	7538739	7539953	.	-	.	ID=gene6842;Dbxref=GeneID:1102220;Name=SC6A5.30c;gbkey=Gene;gene=SC6A5.30c;gene_biotype=protein_coding;gene_synonym=SC6A5.30c;locus_tag=SCO6781
NC_003888.3	RefSeq	CDS	7538739	7539953	.	-	0	ID=cds6715;Parent=gene6842;Dbxref=Genbank:NP_630853.1,GeneID:1102220;Name=NP_630853.1;Note=SC6A5.30c%2C possible regulatory protein%2C len: 404 aa%3B varying levels of similarity to hypothetical proteins and proposed regulators e.g. TR:P95251 (EMBL:Z84498) hypothetical protein from Mycobacterium tuberculosis (406 aa) fasta scores%3B opt: 319%2C z-score: 348.9%2C E(): 3.9e-12%2C (29.6%25 identity in 372 aa overlap) and TR:O24741 (EMBL:AB001683) receptor for an extracellular regulatory factor from Streptomyces sp. strain FRI-5 (221 aa) fasta scores%3B opt: 165%2C z-score: 187.4%2C E(): 0.0039%2C (43.9%25 identity in 82 aa overlap). Contains two Pfam matches to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a Prosite match to PS01081 Bacterial regulatory proteins%2C tetR family signature. Also contains 2 probable helix-turn-helix (+4.73 SD) 246-267aa and (+4.37 SD) 53-73 aa;gbkey=CDS;gene=SC6A5.30c;product=regulatory protein;protein_id=NP_630853.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7539129	7539269	.	-	.	ID=id8866;Dbxref=GeneID:1102220;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 25.90%2C E-value 2e-05.;gbkey=misc_feature;gene=SC6A5.30c
NC_003888.3	RefSeq	sequence_feature	7539711	7539851	.	-	.	ID=id8867;Dbxref=GeneID:1102220;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 63.30%2C E-value 8.3e-16.;gbkey=misc_feature;gene=SC6A5.30c
NC_003888.3	RefSeq	sequence_feature	7539723	7539815	.	-	.	ID=id8868;Dbxref=GeneID:1102220;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;gene=SC6A5.30c
NC_003888.3	RefSeq	gene	7540064	7541155	.	-	.	ID=gene6843;Dbxref=GeneID:1102221;Name=SC6A5.31c;gbkey=Gene;gene=SC6A5.31c;gene_biotype=protein_coding;gene_synonym=SC6A5.31c;locus_tag=SCO6782
NC_003888.3	RefSeq	CDS	7540064	7541155	.	-	0	ID=cds6716;Parent=gene6843;Dbxref=Genbank:NP_630854.1,GeneID:1102221;Name=NP_630854.1;Note=SC6A5.31c%2C probable zinc-binding alcohol dehydrogenase%2C len: 363aa%3B similar to many eg. TR:Q59096 (EMBL:U61983) benzyl alcohol dehydrogenase from Acinetobacter calcoaceticus (371 aa) fasta scores%3B opt: 948%2C z-score: 937.8%2C E(): 0%2C (42.8%25 identity in 360 aa overlap). Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases and Prosite match to PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=CDS;gene=SC6A5.31c;product=zinc-binding alcohol dehydrogenase;protein_id=NP_630854.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7540073	7541140	.	-	.	ID=id8869;Dbxref=GeneID:1102221;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 287.80%2C E-value 1.4e-82.;gbkey=misc_feature;gene=SC6A5.31c
NC_003888.3	RefSeq	sequence_feature	7540931	7540975	.	-	.	ID=id8870;Dbxref=GeneID:1102221;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=misc_feature;gene=SC6A5.31c
NC_003888.3	RefSeq	gene	7541152	7541619	.	-	.	ID=gene6844;Dbxref=GeneID:1102222;Name=SC6A5.32c;gbkey=Gene;gene=SC6A5.32c;gene_biotype=protein_coding;gene_synonym=SC6A5.32c;locus_tag=SCO6783
NC_003888.3	RefSeq	CDS	7541152	7541619	.	-	0	ID=cds6717;Parent=gene6844;Dbxref=Genbank:NP_630855.1,GeneID:1102222;Name=NP_630855.1;Note=SC6A5.32c%2C unknown%2C len: 155 aa%3B similar to TR:Q55966 (EMBL:D64005) hypothetical protein from Synechocystis sp. PCC6803 (180 aa) fasta scores%3B opt: 161%2C z-score: 214.8%2C E(): 0.00012%2C (28.3%25 identity in 180 aa overlap).;gbkey=CDS;gene=SC6A5.32c;product=hypothetical protein;protein_id=NP_630855.1;transl_table=11
NC_003888.3	RefSeq	gene	7541642	7542313	.	-	.	ID=gene6845;Dbxref=GeneID:1102223;Name=SC6A5.33c;gbkey=Gene;gene=SC6A5.33c;gene_biotype=protein_coding;gene_synonym=SC6A5.33c;locus_tag=SCO6784
NC_003888.3	RefSeq	CDS	7541642	7542313	.	-	0	ID=cds6718;Parent=gene6845;Dbxref=Genbank:NP_630856.1,GeneID:1102223;Name=NP_630856.1;Note=SC6A5.33c%2C possible regulatory protein%2C len: 223 aa%3B similar to hypothetical proteins e.g. TR:P96839 (EMBL:Z92774) from Mycobacterium tuberculosis (200 aa) fasta scores%3B opt: 262%2C z-score: 321.3%2C E(): 1.4e-10%2C (29.1%25 identity in 182 aa overlap). Also short regions of similarity to regulatory proteins e.g. SW:TER8_PASMU tetracycline repressor protein from Pasteurella multocida (207 aa) fasta scores%3B opt: 152%2C z-score: 190.7%2C E(): 0.0025%2C (41.4%25 identity in 58 aa overlap). Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and probable helix-turn-helix (+2.65 SD) 44-6 5aa;gbkey=CDS;gene=SC6A5.33c;product=regulatory protein;protein_id=NP_630856.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7542095	7542235	.	-	.	ID=id8871;Dbxref=GeneID:1102223;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 58.70%2C E-value 1.5e-14.;gbkey=misc_feature;gene=SC6A5.33c
NC_003888.3	RefSeq	gene	7542559	7543722	.	+	.	ID=gene6846;Dbxref=GeneID:1102224;Name=SC6A5.34;gbkey=Gene;gene=SC6A5.34;gene_biotype=protein_coding;gene_synonym=SC6A5.34;locus_tag=SCO6785
NC_003888.3	RefSeq	CDS	7542559	7543722	.	+	0	ID=cds6719;Parent=gene6846;Dbxref=Genbank:NP_630857.1,GeneID:1102224;Name=NP_630857.1;Note=SC6A5.34%2C probable fatty acid co-A racemase%2C len: 387aa%3B similar to egs. TR:O06543 (EMBL:Z95584) hypothetical protein from Mycobacterium tuberculosis (360 aa) fasta scores%3B opt: 1304%2C z-score: 1373.1%2C E(): 0%2C (52.8%25 identity in 362 aa overlap) and TR:O09176 (EMBL:U89905) alpha-methylacyl-CoA racemase from rat liver (Rattus norvegicus) (361 aa) fasta scores%3B opt: 985%2C z-score: 1039.0%2C E(): 0%2C (44.4%25 identity in 342 aa overlap).;gbkey=CDS;gene=SC6A5.34;product=fatty acid co-A racemase;protein_id=NP_630857.1;transl_table=11
NC_003888.3	RefSeq	gene	7543722	7544747	.	+	.	ID=gene6847;Dbxref=GeneID:1102225;Name=SC6A5.35;gbkey=Gene;gene=SC6A5.35;gene_biotype=protein_coding;gene_synonym=SC6A5.35;locus_tag=SCO6786
NC_003888.3	RefSeq	CDS	7543722	7544747	.	+	0	ID=cds6720;Parent=gene6847;Dbxref=Genbank:NP_630858.1,GeneID:1102225;Name=NP_630858.1;Note=SC6A5.35%2C possible oxidoreductase%2C len: 341aa%3B similar to many hypothetical proteins eg. TR:O53565 (EMBL:AL022022) from Mycobacterium tuberculosis (347 aa) fasta scores%3B opt: 800%2C z-score: 921.0%2C E(): 0%2C (38.9%25 identity in 339 aa overlap). Also similar to TR:O68447 (EMBL:AF041061) F420-dependent glucose-6-phosphate dehydrogenase from Mycobacterium smegmatis (336 aa) fasta scores%3B opt: 198%2C z-score: 232.5%2C E(): 1.2e-05%2C (24.8%25 identity in 343 aa overlap).;gbkey=CDS;gene=SC6A5.35;product=oxidoreductase;protein_id=NP_630858.1;transl_table=11
NC_003888.3	RefSeq	gene	7544744	7545892	.	+	.	ID=gene6848;Dbxref=GeneID:1102226;Name=acdH3;gbkey=Gene;gene=acdH3;gene_biotype=protein_coding;gene_synonym=acdH3,SC6A5.36;locus_tag=SCO6787
NC_003888.3	RefSeq	CDS	7544744	7545892	.	+	0	ID=cds6721;Parent=gene6848;Dbxref=Genbank:NP_630859.1,GeneID:1102226;Name=NP_630859.1;Note=SC6A5.36%2C acdH3%2C probable acyl-CoA dehydrogenase%2C len: 382 aa%3B similar to many (prokaryote and eukaryote) egs. TR:O33229 (EMBL:Z98209) probable acyl-CoA dehydrogenase from Mycobacterium tuberculosis (386 aa) fasta scores%3B opt: 1583%2C z-score: 1842.1%2C E(): 0%2C (62.7%25 identity in 378 aa overlap) and SW:ACDL_HUMAN acyl-CoA dehydrogenase from Homo sapiens (Human) (430 aa) fasta scores%3B opt: 1265%2C z-score: 1472.3%2C E(): 0%2C (51.8%25 identity in 380 aa overlap). Contains Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and Prosite matches to PS00072 Acyl-CoA dehydrogenases signature 1 and PS00073 Acyl-CoA dehydrogenases signature 2.;gbkey=CDS;gene=acdH3;product=acyl-CoA dehydrogenase;protein_id=NP_630859.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7544765	7545877	.	+	.	ID=id8872;Dbxref=GeneID:1102226;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 479.90%2C E-value 2.1e-140.;gbkey=misc_feature;gene=acdH3
NC_003888.3	RefSeq	sequence_feature	7545122	7545160	.	+	.	ID=id8873;Dbxref=GeneID:1102226;Note=PS00072 Acyl-CoA dehydrogenases signature 1.;gbkey=misc_feature;gene=acdH3
NC_003888.3	RefSeq	sequence_feature	7545758	7545817	.	+	.	ID=id8874;Dbxref=GeneID:1102226;Note=PS00073 Acyl-CoA dehydrogenases signature 2.;gbkey=misc_feature;gene=acdH3
NC_003888.3	RefSeq	gene	7545965	7547179	.	+	.	ID=gene6849;Dbxref=GeneID:1102227;Name=SC6A5.37;gbkey=Gene;gene=SC6A5.37;gene_biotype=protein_coding;gene_synonym=SC6A5.37;locus_tag=SCO6788
NC_003888.3	RefSeq	CDS	7545965	7547179	.	+	0	ID=cds6722;Parent=gene6849;Dbxref=Genbank:NP_630860.1,GeneID:1102227;Name=NP_630860.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;gbkey=CDS;gene=SC6A5.37;product=acetyl-CoA acetyltransferase;protein_id=NP_630860.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7545968	7547176	.	+	.	ID=id8875;Dbxref=GeneID:1102227;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2C score 391.70%2C E-value 7.4e-114.;gbkey=misc_feature;gene=SC6A5.37
NC_003888.3	RefSeq	sequence_feature	7547012	7547062	.	+	.	ID=id8876;Dbxref=GeneID:1102227;Note=PS00737 Thiolases signature 2.;gbkey=misc_feature;gene=SC6A5.37
NC_003888.3	RefSeq	sequence_feature	7547117	7547158	.	+	.	ID=id8877;Dbxref=GeneID:1102227;Note=PS00099 Thiolases active site.;gbkey=misc_feature;gene=SC6A5.37
NC_003888.3	RefSeq	gene	7547223	7549424	.	+	.	ID=gene6850;Dbxref=GeneID:1102228;Name=SC6A5.38;gbkey=Gene;gene=SC6A5.38;gene_biotype=protein_coding;gene_synonym=SC6A5.38;locus_tag=SCO6789
NC_003888.3	RefSeq	CDS	7547223	7549424	.	+	0	ID=cds6723;Parent=gene6850;Dbxref=Genbank:NP_630861.1,GeneID:1102228;Name=NP_630861.1;Note=SC6A5.38%2C possible fatty oxidation protein%2C len: 733aa%3B similar to many eg. SW:FADB_ECOLI FadB%2C a multifunctional protein from the Escherichia coli fadBA operon%2C encoding the fatty acid-oxidizing multienzyme complex (729 aa) fasta scores%3B opt: 1119%2C z-score: 1146.7%2C E(): 0%2C (32.3%25 identity in 691 aa overlap). Contains Pfam matches to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family and entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase and a Prosite match to PS00923 Aspartate and glutamate racemases signature 1.;gbkey=CDS;gene=SC6A5.38;product=fatty oxidation protein;protein_id=NP_630861.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7547280	7547810	.	+	.	ID=id8878;Dbxref=GeneID:1102228;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 136.60%2C E-value 4.5e-37.;gbkey=misc_feature;gene=SC6A5.38
NC_003888.3	RefSeq	sequence_feature	7548198	7549040	.	+	.	ID=id8879;Dbxref=GeneID:1102228;Note=Pfam match to entry PF00725 3HCDH%2C 3-hydroxyacyl-CoA dehydrogenase%2C score 256.00%2C E-value 5.2e-73.;gbkey=misc_feature;gene=SC6A5.38
NC_003888.3	RefSeq	sequence_feature	7548516	7548545	.	+	.	ID=id8880;Dbxref=GeneID:1102228;Note=PS00923 Aspartate and glutamate racemases signature 1.;gbkey=misc_feature;gene=SC6A5.38
NC_003888.3	RefSeq	gene	7549461	7551299	.	+	.	ID=gene6851;Dbxref=GeneID:1102229;Name=SC6A5.39;gbkey=Gene;gene=SC6A5.39;gene_biotype=protein_coding;gene_synonym=SC6A5.39;locus_tag=SCO6790
NC_003888.3	RefSeq	CDS	7549461	7551299	.	+	0	ID=cds6724;Parent=gene6851;Dbxref=Genbank:NP_630862.1,GeneID:1102229;Name=NP_630862.1;Note=SC6A5.39%2C probable long chain fatty acid coA ligase%2C len: aa%3B similar to many eg. TR:E1359128 long chain fatty acid coA ligase from Streptomyces coelicolor (608 aa) fasta scores%3B opt: 943%2C z-score: 1037.6%2C E(): 0%2C (34.8%25 identity in 621 aa overlap) and SW:LCFX_RAT long chain fatty acid coA ligase from Rattus norvegicus (Rat) (697 aa) fasta scores%3B opt: 532%2C z-score: 584.9%2C E(): 2.8e-25%2C (28.0%25 identity in 626 aa overlap). Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and Prosite match to PS00455  AMP-binding domain signature.;gbkey=CDS;gene=SC6A5.39;product=long chain fatty acid CoA ligase;protein_id=NP_630862.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7549620	7550978	.	+	.	ID=id8881;Dbxref=GeneID:1102229;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score -101.20%2C E-value 2.6e-09.;gbkey=misc_feature;gene=SC6A5.39
NC_003888.3	RefSeq	sequence_feature	7550040	7550075	.	+	.	ID=id8882;Dbxref=GeneID:1102229;Note=PS00455  AMP-binding domain signature.;gbkey=misc_feature;gene=SC6A5.39
NC_003888.3	RefSeq	gene	7551380	7552519	.	-	.	ID=gene6852;Dbxref=GeneID:1102230;Name=SC6A5.40c;gbkey=Gene;gene=SC6A5.40c;gene_biotype=protein_coding;gene_synonym=SC6A5.40c;locus_tag=SCO6791
NC_003888.3	RefSeq	CDS	7551380	7552519	.	-	0	ID=cds6725;Parent=gene6852;Dbxref=Genbank:NP_630863.1,GeneID:1102230;Name=NP_630863.1;Note=SC6A5.40c%2C partial CDS%2C probable acyl-coA dehydrogenase%2C len: 395aa%3B similar to many eg. TR:O34421 (EMBL:Z99113) from Bacillus subtilis (380 aa) fasta scores%3B opt: 777%2C z-score: 903.0%2C E(): 0%2C (36.6%25 identity in 383 aa overlap) and SW:ACDS_HUMAN acyl-coA dehydrogenase from Homo sapiens (Human) (412 aa) fasta scores%3B opt: 643%2C z-score: 747.6%2C E(): 0%2C (32.3%25 identity in 387 aa overlap). Contains three Pfam matches to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and a Prosite match to PS00072 Acyl-CoA dehydrogenases signature 1.;gbkey=CDS;gene=SC6A5.40c;product=acyl-CoA dehydrogenase;protein_id=NP_630863.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7551395	7551877	.	-	.	ID=id8883;Dbxref=GeneID:1102230;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 193.80%2C E-value 5.2e-56.;gbkey=misc_feature;gene=SC6A5.40c
NC_003888.3	RefSeq	sequence_feature	7551932	7552378	.	-	.	ID=id8884;Dbxref=GeneID:1102230;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 99.10%2C E-value 3e-28.;gbkey=misc_feature;gene=SC6A5.40c
NC_003888.3	RefSeq	sequence_feature	7552109	7552147	.	-	.	ID=id8885;Dbxref=GeneID:1102230;Note=PS00072 Acyl-CoA dehydrogenases signature 1.;gbkey=misc_feature;gene=SC6A5.40c
NC_003888.3	RefSeq	sequence_feature	7552451	7552507	.	-	.	ID=id8886;Dbxref=GeneID:1102230;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 9.80%2C E-value 0.047.;gbkey=misc_feature;gene=SC6A5.40c
NC_003888.3	RefSeq	sequence_feature	7552473	7552569	.	+	.	ID=id8887;Note=485 (+1) 43536 43632 SC6A5;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7552580	7552586	.	+	.	ID=id8888;gbkey=RBS
NC_003888.3	RefSeq	gene	7552594	7553190	.	+	.	ID=gene6853;Dbxref=GeneID:1102231;Name=SC1A2.01;gbkey=Gene;gene=SC1A2.01;gene_biotype=protein_coding;gene_synonym=SC1A2.01;locus_tag=SCO6792
NC_003888.3	RefSeq	CDS	7552594	7553190	.	+	0	ID=cds6726;Parent=gene6853;Dbxref=Genbank:NP_630864.1,GeneID:1102231;Name=NP_630864.1;Note=SC1A2.01%2C possible TetR-family transcriptional regulator%2C len: 198 aa. Weakly similar to Escherichia coli SW:UIDR_ECOLI (EMBL:M14641) UID operon repressor (GUS operon repressor) (196 aa)%2C fasta scores opt: 164 z-score: 213.3 E(): 0.00018 24.7%25 identity in 186 aa overlap. Also similar to Streptomyces coelicolor TR:CAB61186 (EMBL:AL132973) TetR-family transcriptional regulator%2C SCF91.29 (205 aa)%2C fasta scores opt: 265 z-score: 338.0 E(): 2e-11 34.1%25 identity in 185 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 33..54 (+5.25 SD).;gbkey=CDS;gene=SC1A2.01;product=TetR family transcriptional regulator;protein_id=NP_630864.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7552642	7552782	.	+	.	ID=id8889;Dbxref=GeneID:1102231;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 43.20%2C E-value 3e-10;gbkey=misc_feature;gene=SC1A2.01
NC_003888.3	RefSeq	gene	7553214	7554719	.	-	.	ID=gene6854;Dbxref=GeneID:1102232;Name=SC1A2.02c;gbkey=Gene;gene=SC1A2.02c;gene_biotype=protein_coding;gene_synonym=SC1A2.02c;locus_tag=SCO6793
NC_003888.3	RefSeq	CDS	7553214	7554719	.	-	0	ID=cds6727;Parent=gene6854;Dbxref=Genbank:NP_630865.1,GeneID:1102232;Name=NP_630865.1;Note=SC1A2.02c%2C probable aldehyde dehydrogenase%2C len: 501 aa. Similar to many dehydrogenases e.g. Rhizobium sp. (strain NGR234) SW:GABD_RHISN(EMBL:AE000096) probable succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) (491 aa)%2C fasta scores opt: 812 z-score: 864.8 E():0 33.3%25 identity in 468 aa overlap and Streptomyces coelicolor TR:Q9ZBH2(EMBL:AL035206) aldehyde dehydrogenase%2C SC9B5.08 (468 aa)%2C fasta scores opt: 834 z-score: 888.4 E(): 0 37.1%25 identity in 463 aa overlap. Contains a Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family. Also contains Prosite hits to PS00687 Aldehyde dehydrogenases glutamic acid active site and PS00070 Aldehyde dehydrogenases cysteine active site.;gbkey=CDS;gene=SC1A2.02c;product=aldehyde dehydrogenase;protein_id=NP_630865.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7553310	7554698	.	-	.	ID=id8890;Dbxref=GeneID:1102232;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 430.50%2C E-value 1.5e-125;gbkey=misc_feature;gene=SC1A2.02c
NC_003888.3	RefSeq	sequence_feature	7553874	7553909	.	-	.	ID=id8891;Dbxref=GeneID:1102232;Note=PS00070 Aldehyde dehydrogenases cysteine active site;gbkey=misc_feature;gene=SC1A2.02c
NC_003888.3	RefSeq	sequence_feature	7553970	7553993	.	-	.	ID=id8892;Dbxref=GeneID:1102232;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SC1A2.02c
NC_003888.3	RefSeq	gene	7555369	7557321	.	+	.	ID=gene6855;Dbxref=GeneID:1102233;Name=cvnA7;gbkey=Gene;gene=cvnA7;gene_biotype=protein_coding;gene_synonym=cvnA7,SC1A2.03;locus_tag=SCO6794
NC_003888.3	RefSeq	CDS	7555369	7557321	.	+	0	ID=cds6728;Parent=gene6855;Dbxref=Genbank:NP_630866.1,GeneID:1102233;Name=NP_630866.1;Note=SC1A2.03%2C cvnA7%2C possible membrane protein%2C len: 650 aa. Weakly similar to several including Streptomyces coelicolor TR:Q9X836(EMBL:AL049727) large hypothetical protein%2C SC9B1.16C (877 aa)%2C fasta scores opt: 781 z-score: 616.3 E(): 6.4e-27 35.1%25 identity in 582 aa overlap and Streptomyces coelicolor TR:CAB61282(EMBL:AL132991)  sensor kinase%2C SCF55.12C (575 aa)%2C fasta scores opt: 426 z-score: 343.4 E(): 1e-11 28.9%25 identity in 508 aa overlap. Contains two possible membrane spanning hydrophobic domains towards the N-terminal and 4x VPAPV repeat between residues 485..504.;gbkey=CDS;gene=cvnA7;product=hypothetical protein;protein_id=NP_630866.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7557422	7557427	.	+	.	ID=id8893;gbkey=RBS
NC_003888.3	RefSeq	gene	7557438	7557872	.	+	.	ID=gene6856;Dbxref=GeneID:1102234;Name=cvnB7;gbkey=Gene;gene=cvnB7;gene_biotype=protein_coding;gene_synonym=cvnB7,SC1A2.04;locus_tag=SCO6795
NC_003888.3	RefSeq	CDS	7557438	7557872	.	+	0	ID=cds6729;Parent=gene6856;Dbxref=Genbank:NP_630867.1,GeneID:1102234;Name=NP_630867.1;Note=SC1A2.04%2C cvnB7%2C unknown%2C len: 124 aa. Highly similar to several proteins of unknown function from Streptomyces coelicolor including: TR:Q9X835(EMBL:AL049727) SC9B1.15C (139 aa)%2C fasta scores opt: 345 z-score: 434.8 E(): 8.2e-17 45.0%25 identity in 140 aa overlap and TR:CAB61281(EMBL:AL132991) SCF55.11C (152 aa)%2C fasta scores opt:309 z-score:390.4 E(): 2.4e-14 41.0%25 identity in 134 aa overlap.;gbkey=CDS;gene=cvnB7;product=hypothetical protein;protein_id=NP_630867.1;transl_table=11
NC_003888.3	RefSeq	gene	7557869	7558249	.	+	.	ID=gene6857;Dbxref=GeneID:1102235;Name=cvnC7;gbkey=Gene;gene=cvnC7;gene_biotype=protein_coding;gene_synonym=cvnC7,SC1A2.05;locus_tag=SCO6796
NC_003888.3	RefSeq	CDS	7557869	7558249	.	+	0	ID=cds6730;Parent=gene6857;Dbxref=Genbank:NP_630868.1,GeneID:1102235;Name=NP_630868.1;Note=SC1A2.05%2C cvnC7%2C unknown%2C len: 126 aa. Highly similar to several proteins of unknown function from Streptomyces coelicolor including: TR:Q9X834 (EMBL:AL049727) SC9B1.14C (119 aa)%2C fasta scores opt: 317 z-score: 414.9 E(): 1.1e-15 48.2%25 identity in 114 aa overlap and TR:CAB61280(EMBL:AL132991) SCF55.10C (113 aa)%2C fasta scores opt: 261 z-score: 344.5 E(): 8.8e-12 44.3%25 identity in 106 aa overlap.;gbkey=CDS;gene=cvnC7;product=hypothetical protein;protein_id=NP_630868.1;transl_table=11
NC_003888.3	RefSeq	gene	7558302	7558856	.	+	.	ID=gene6858;Dbxref=GeneID:1102236;Name=cvnD7;gbkey=Gene;gene=cvnD7;gene_biotype=protein_coding;gene_synonym=cvnD7,SC1A2.06;locus_tag=SCO6797
NC_003888.3	RefSeq	CDS	7558302	7558856	.	+	0	ID=cds6731;Parent=gene6858;Dbxref=Genbank:NP_630869.1,GeneID:1102236;Name=NP_630869.1;Note=SC1A2.06%2C cvnD7%2C possible ATP/GTP binding protein%2C len: 184 aa. Highly similar to many Streptomyces coelicolor ATP/GTP binding proteins including: TR:CAA19989(EMBL:AL031124) SC1C2.22C (174 aa)%2C fasta scores opt: 685 z-score: 872.1 E(): 0 60.8%25 identity in 166 aa overlap%2C TR:O86519(EMBL:AL031124) SC1C2.18C (174 aa)%2C fasta scores opt: 686 z-score: 873.4 E(): 0 59.6%25 identity in 166 aa overlap and TR:CAB61279(EMBL:AL132991) SCF55.09C (178 aa)%2Cfasta scores opt: 605 z-score: 771.3 E():0 50.8%25 identity in 177 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=cvnD7;product=ATP/GTP binding protein;protein_id=NP_630869.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7558308	7558331	.	+	.	ID=id8894;Dbxref=GeneID:1102236;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD7
NC_003888.3	RefSeq	gene	7558853	7559428	.	+	.	ID=gene6859;Dbxref=GeneID:1102237;Name=SC1A2.07;gbkey=Gene;gene=SC1A2.07;gene_biotype=protein_coding;gene_synonym=SC1A2.07;locus_tag=SCO6798
NC_003888.3	RefSeq	CDS	7558853	7559428	.	+	0	ID=cds6732;Parent=gene6859;Dbxref=Genbank:NP_630870.1,GeneID:1102237;Name=NP_630870.1;Note=SC1A2.07%2C unknown%2C len: 191 aa.;gbkey=CDS;gene=SC1A2.07;product=hypothetical protein;protein_id=NP_630870.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7559617	7559621	.	+	.	ID=id8895;gbkey=RBS
NC_003888.3	RefSeq	gene	7559630	7560658	.	+	.	ID=gene6860;Dbxref=GeneID:1102238;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=SCO6799
NC_003888.3	RefSeq	CDS	7559630	7560658	.	+	0	ID=cds6733;Parent=gene6860;Dbxref=Genbank:NP_630871.1,GeneID:1102238;Name=NP_630871.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=NP_630871.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7559633	7560646	.	+	.	ID=id8896;Dbxref=GeneID:1102238;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 301.80%2C E-value 8.3e-87;gbkey=misc_feature;gene=tdh
NC_003888.3	RefSeq	sequence_feature	7559813	7559857	.	+	.	ID=id8897;Dbxref=GeneID:1102238;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=tdh
NC_003888.3	RefSeq	ribosome_entry_site	7560685	7560689	.	+	.	ID=id8898;gbkey=RBS
NC_003888.3	RefSeq	gene	7560698	7561891	.	+	.	ID=gene6861;Dbxref=GeneID:1102239;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;gene_synonym=kbl,SC1A2.09;locus_tag=SCO6800
NC_003888.3	RefSeq	CDS	7560698	7561891	.	+	0	ID=cds6734;Parent=gene6861;Dbxref=Genbank:NP_630872.1,GeneID:1102239;Name=NP_630872.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;gene=kbl;product=2-amino-3-ketobutyrate coenzyme A ligase;protein_id=NP_630872.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7560956	7561804	.	+	.	ID=id8899;Dbxref=GeneID:1102239;Note=Pfam match to entry PF00222 aminotran_2%2C Aminotransferases class-II%2C score 349.50%2C E-value 3.5e-101;gbkey=misc_feature;gene=kbl
NC_003888.3	RefSeq	sequence_feature	7561421	7561450	.	+	.	ID=id8900;Dbxref=GeneID:1102239;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=kbl
NC_003888.3	RefSeq	gene	7561923	7562825	.	+	.	ID=gene6862;Dbxref=GeneID:1102240;Name=SC1A2.10;gbkey=Gene;gene=SC1A2.10;gene_biotype=protein_coding;gene_synonym=SC1A2.10;locus_tag=SCO6801
NC_003888.3	RefSeq	CDS	7561923	7562825	.	+	0	ID=cds6735;Parent=gene6862;Dbxref=Genbank:NP_630873.1,GeneID:1102240;Name=NP_630873.1;Note=SC1A2.10%2C possible LysR-family transcriptional regulator%2C len: 300 aa. Similar to many other regulators e.g. Streptomyces coelicolor TR:CAB62680 (EMBL:AL133422) LysR-family transcriptional regulatory protein%2C SCM1.22C (301 aa)%2C fasta scores opt: 673 z-score: 751.5 E():0 40.3%25 identity in 300 aa overlap. Contains 2x Prosite hits to PS00044 Bacterial regulatory proteins%2C lysR family signature and a Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family with the helix-turn-helix motif situated between residues 17..38 (+4.44 SD).;gbkey=CDS;gene=SC1A2.10;product=LysR family transcriptional regulator;protein_id=NP_630873.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7561932	7562360	.	+	.	ID=id8901;Dbxref=GeneID:1102240;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 142.80%2C E-value 6.1e-39;gbkey=misc_feature;gene=SC1A2.10
NC_003888.3	RefSeq	sequence_feature	7561974	7562066	.	+	.	ID=id8902;Dbxref=GeneID:1102240;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature4;gbkey=misc_feature;gene=SC1A2.10
NC_003888.3	RefSeq	sequence_feature	7562172	7562264	.	+	.	ID=id8903;Dbxref=GeneID:1102240;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC1A2.10
NC_003888.3	RefSeq	gene	7562872	7563450	.	+	.	ID=gene6863;Dbxref=GeneID:1102241;Name=SC1A2.11;gbkey=Gene;gene=SC1A2.11;gene_biotype=protein_coding;gene_synonym=SC1A2.11;locus_tag=SCO6802
NC_003888.3	RefSeq	CDS	7562872	7563450	.	+	0	ID=cds6736;Parent=gene6863;Dbxref=Genbank:NP_630874.1,GeneID:1102241;Name=NP_630874.1;Note=SC1A2.11%2C possible DNA-binding protein%2C len: 192 aa. Similar to Streptomyces coelicolor TR:Q9X7W5 (EMBL:AL049485)  DNA-binding protein%2C SC6A5.19 (204 aa)%2C fasta scores opt: 213 z-score: 254.6 E(): 9e-07 30.9%25 identity in 178 aa overlap. Contains a Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix with the helix-turn-helix motif situated between residues 28..49 (+7.43 SD);gbkey=CDS;gene=SC1A2.11;product=DNA-binding protein;protein_id=NP_630874.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7562926	7563090	.	+	.	ID=id8904;Dbxref=GeneID:1102241;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 55.70%2C E-value 1e-12;gbkey=misc_feature;gene=SC1A2.11
NC_003888.3	RefSeq	gene	7563447	7563992	.	+	.	ID=gene6864;Dbxref=GeneID:1102242;Name=SC1A2.12;gbkey=Gene;gene=SC1A2.12;gene_biotype=protein_coding;gene_synonym=SC1A2.12;locus_tag=SCO6803
NC_003888.3	RefSeq	CDS	7563447	7563992	.	+	0	ID=cds6737;Parent=gene6864;Dbxref=Genbank:NP_630875.1,GeneID:1102242;Name=NP_630875.1;Note=SC1A2.12%2C possible acetyltransferase%2C len: 181 aa%2C Similar to Pseudomonas syringae (pv. syringae) SW:TTR_PSESY(EMBL:X17150) acetyltransferase (EC 2.3.1.-) involved in resistance to tabtoxin (177 aa)%2C fasta scores opt: 469 z-score: 572.3 E(): 1.8e-24 47.0%25 identity in 168 aa overlap. Contains a Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SC1A2.12;product=acetyltransferase;protein_id=NP_630875.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7563453	7563878	.	+	.	ID=id8905;Dbxref=GeneID:1102242;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 58.80%2C E-value 1.2e-13;gbkey=misc_feature;gene=SC1A2.12
NC_003888.3	RefSeq	gene	7563999	7564382	.	+	.	ID=gene6865;Dbxref=GeneID:1102243;Name=SC1A2.13;gbkey=Gene;gene=SC1A2.13;gene_biotype=protein_coding;gene_synonym=SC1A2.13;locus_tag=SCO6804
NC_003888.3	RefSeq	CDS	7563999	7564382	.	+	0	ID=cds6738;Parent=gene6865;Dbxref=Genbank:NP_630876.1,GeneID:1102243;Name=NP_630876.1;Note=SC1A2.13%2C unknown%2C len: 127 aa.;gbkey=CDS;gene=SC1A2.13;product=hypothetical protein;protein_id=NP_630876.1;transl_table=11
NC_003888.3	RefSeq	gene	7564533	7565837	.	+	.	ID=gene6866;Dbxref=GeneID:1102244;Name=SC1A2.14;gbkey=Gene;gene=SC1A2.14;gene_biotype=protein_coding;gene_synonym=SC1A2.14;locus_tag=SCO6805
NC_003888.3	RefSeq	CDS	7564533	7565837	.	+	0	ID=cds6739;Parent=gene6866;Dbxref=Genbank:NP_630877.1,GeneID:1102244;Name=NP_630877.1;Note=SC1A2.14%2C possible integral membrane efflux protein%2C len: 434 aa. Similar to several membrane efflux proteins including: Mycobacterium smegmatis TR:O31137(EMBL:AF030344) Tetracycline-resistance determinant%2C TetV (419 aa)%2C fasta scores opt: 521 z-score: 542.1 E(): 8.7e-23 28.6%25 identity in 406 aa overlap and Streptomyces coelicolor TR:CAB51438(EMBL:AL096884) integral membrane efflux protein%2C SC4G6.15C (384 aa)%2C fasta scores opt: 403 z-score: 421.7 E(): 4.4e-16 30.1%25 identity in 389 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1A2.14;product=integral membrane efflux protein;protein_id=NP_630877.1;transl_table=11
NC_003888.3	RefSeq	gene	7565958	7566031	.	+	.	ID=gene6867;Dbxref=GeneID:3240066;Name=SCOt63;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt63
NC_003888.3	RefSeq	tRNA	7565958	7566031	.	+	.	ID=rna83;Parent=gene6867;Dbxref=GeneID:3240066;Note=tRNA Pro anticodon GGG%2C Cove score 78.36;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	exon	7565958	7566031	.	+	.	ID=id8906;Parent=rna83;Dbxref=GeneID:3240066;Note=tRNA Pro anticodon GGG%2C Cove score 78.36;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	gene	7566130	7567347	.	-	.	ID=gene6868;Dbxref=GeneID:1102245;Name=SC1A2.15C;gbkey=Gene;gene=SC1A2.15C;gene_biotype=protein_coding;gene_synonym=SC1A2.15C;locus_tag=SCO6806
NC_003888.3	RefSeq	CDS	7566130	7567347	.	-	0	ID=cds6740;Parent=gene6868;Dbxref=Genbank:NP_630878.1,GeneID:1102245;Name=NP_630878.1;Note=SC1A2.15c%2C possible phage integrase%2C len: 405 aa. Weakly similar to Corynephage 304L TR:Q9ZWV7 (EMBL:Y18058) integrase (395 aa)%2C fasta scores opt: 190 z-score: 224.2 E(): 4.4e-05 24.6%25 identity in 391 aa overlap and Streptomyces coelicolor TR:Q9Z4Y1 (EMBL:AL035707) integrase%2C SCE29.19C (384 aa)%2C fasta scores opt: 191 z-score: 225.6 E(): 3.7e-05 27.4%25 identity in 358 aa overlap. Contains a Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family.;gbkey=CDS;gene=SC1A2.15C;product=phage integrase;protein_id=NP_630878.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7566211	7566798	.	-	.	ID=id8907;Dbxref=GeneID:1102245;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 65.20%2C E-value 1.4e-15;gbkey=misc_feature;gene=SC1A2.15C
NC_003888.3	RefSeq	gene	7568251	7570044	.	-	.	ID=gene6869;Dbxref=GeneID:1102246;Name=SC1A2.16c;gbkey=Gene;gene=SC1A2.16c;gene_biotype=protein_coding;gene_synonym=SC1A2.16c;locus_tag=SCO6807
NC_003888.3	RefSeq	CDS	7568251	7570044	.	-	0	ID=cds6741;Parent=gene6869;Dbxref=Genbank:NP_630879.1,GeneID:1102246;Name=NP_630879.1;Note=SC1A2.16c%2C unknown%2C len: 597 aa.;gbkey=CDS;gene=SC1A2.16c;product=hypothetical protein;protein_id=NP_630879.1;transl_table=11
NC_003888.3	RefSeq	gene	7570606	7570968	.	-	.	ID=gene6870;Dbxref=GeneID:1102247;Name=SC1A2.17c;gbkey=Gene;gene=SC1A2.17c;gene_biotype=protein_coding;gene_synonym=SC1A2.17c;locus_tag=SCO6808
NC_003888.3	RefSeq	CDS	7570606	7570968	.	-	0	ID=cds6742;Parent=gene6870;Dbxref=Genbank:NP_630880.1,GeneID:1102247;Name=NP_630880.1;Note=SC1A2.17c%2C possible ArsR-family transcriptional regulator%2C len: 120 aa. Similar to several regulators including: Streptomyces coelicolor TR:Q9X8X8 (EMBL:AL078610) transcriptional regulator%2C SCH35.28C (122 aa)%2C fasta scores opt: 297 z-score: 392.7 E(): 1.8e-14 49.4%25 identity in 87 aa overlap and Mycobacterium tuberculosis TR:P71941 (EMBL:Z80225) transcriptional regulator (126 aa)%2C fasta scores opt: 262 z-score: 348.0 E(): 5.6e-12 38.1%25 identity in 113 aa overlap. Contains a Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family with the helix-turn-helix motif situated between residues 56..77 (+4.54 SD).;gbkey=CDS;gene=SC1A2.17c;product=transcription regulator ArsR;protein_id=NP_630880.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7570630	7570872	.	-	.	ID=id8908;Dbxref=GeneID:1102247;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 85.20%2C E-value 1.4e-21;gbkey=misc_feature;gene=SC1A2.17c
NC_003888.3	RefSeq	gene	7571107	7572336	.	-	.	ID=gene6871;Dbxref=GeneID:1102248;Name=SC1A2.18c;gbkey=Gene;gene=SC1A2.18c;gene_biotype=protein_coding;gene_synonym=SC1A2.18c;locus_tag=SCO6809
NC_003888.3	RefSeq	CDS	7571107	7572336	.	-	0	ID=cds6743;Parent=gene6871;Dbxref=Genbank:NP_630881.1,GeneID:1102248;Name=NP_630881.1;Note=SC1A2.18c%2C possible integral membrane transport protein%2C len: 409 aa. Similar to several membrane transport proteins e.g. Listeria monocytogenes TR:Q9X769 (EMBL:AJ009627) multi drug resistance transporter (397 aa)%2C fasta scores opt: 241 z-score: 264.5 E(): 2.5e-07 23.0%25 identity in 344 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a Prosite hit to PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SC1A2.18c;product=integral membrane transport protein;protein_id=NP_630881.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7571407	7571493	.	-	.	ID=id8909;Dbxref=GeneID:1102248;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC1A2.18c
NC_003888.3	RefSeq	gene	7572343	7572801	.	-	.	ID=gene6872;Dbxref=GeneID:1102249;Name=SC1A2.19c;gbkey=Gene;gene=SC1A2.19c;gene_biotype=protein_coding;gene_synonym=SC1A2.19c;locus_tag=SCO6810
NC_003888.3	RefSeq	CDS	7572343	7572801	.	-	0	ID=cds6744;Parent=gene6872;Dbxref=Genbank:NP_630882.1,GeneID:1102249;Name=NP_630882.1;Note=SC1A2.19c%2C unknown%2C len: 152 aa. Highly similar to proteins of undefined function from Mycobacterium tuberculosis SW:YQ11_MYCTU (EMBL:Z80225) (152 aa)%2C fasta scores opt: 509 z-score: 630.7 E(): 1e-27 55.0%25 identity in 149 aa overlap and Bacillus subtilis SW:YQCK_BACSU (EMBL:D32216) (146 aa)%2C fasta scores opt:349 z-score: 437.2 E():6e-17 34.9%25 identity in 152 aa overlap;gbkey=CDS;gene=SC1A2.19c;product=hypothetical protein;protein_id=NP_630882.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7572810	7572814	.	-	.	ID=id8910;gbkey=RBS
NC_003888.3	RefSeq	gene	7572869	7574263	.	-	.	ID=gene6873;Dbxref=GeneID:1102250;Name=SC1A2.20c;gbkey=Gene;gene=SC1A2.20c;gene_biotype=protein_coding;gene_synonym=SC1A2.20c;locus_tag=SCO6811
NC_003888.3	RefSeq	CDS	7572869	7574263	.	-	0	ID=cds6745;Parent=gene6873;Dbxref=Genbank:NP_630883.1,GeneID:1102250;Name=NP_630883.1;Note=SC1A2.20c%2C possible hypothetical protein%2C len: 464 aa. The N-terminus is highly similar to Streptomyces coelicolor TR:Q9X8X7 (EMBL:AL078610) hypothetical protein%2C SCH35.29 (162 aa)%2C fasta scores opt: 753 z-score: 813.4 E(): 0 71.2%25 identity in 146 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC1A2.20c;product=hypothetical protein;protein_id=NP_630883.1;transl_table=11
NC_003888.3	RefSeq	gene	7574420	7574779	.	+	.	ID=gene6874;Dbxref=GeneID:1102251;Name=SC1A2.21;gbkey=Gene;gene=SC1A2.21;gene_biotype=protein_coding;gene_synonym=SC1A2.21;locus_tag=SCO6812
NC_003888.3	RefSeq	CDS	7574420	7574779	.	+	0	ID=cds6746;Parent=gene6874;Dbxref=Genbank:NP_630884.1,GeneID:1102251;Name=NP_630884.1;Note=SC1A2.21%2C possible ArsR-family transcriptional regulator%2C len: 119 aa. Highly similar to several including: Streptomyces coelicolor TR:Q9X8X8 (EMBL:AL078610) transcriptional regulator%2C SCH35.28C (122 aa)%2C fasta scores opt: 485 z-score: 630.1 E(): 1.1e-27 69.7%25 identity in 99 aa overlap and Mycobacterium tuberculosis TR:P71941 (EMBL:Z80225)  transcriptional regulator (126 aa)%2C fasta scores opt:378 z-score: 494.4 E(): 3.9e-20 59.8%25 identity in 97 aa overlap. Also similar to the adjoining CDS SC1A2.22 (113 aa)%2C fasta scores opt: 292 z-score: 353.0 E(): 3.1e-14 51.1%25 identity in 94 aa overlap. Contains a Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=SC1A2.21;product=transcription regulator ArsR;protein_id=NP_630884.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7574534	7574773	.	+	.	ID=id8911;Dbxref=GeneID:1102251;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 93.10%2C E-value 5.6e-24;gbkey=misc_feature;gene=SC1A2.21
NC_003888.3	RefSeq	ribosome_entry_site	7574884	7574888	.	+	.	ID=id8912;gbkey=RBS
NC_003888.3	RefSeq	gene	7574897	7575238	.	+	.	ID=gene6875;Dbxref=GeneID:1102252;Name=SC1A2.22;gbkey=Gene;gene=SC1A2.22;gene_biotype=protein_coding;gene_synonym=SC1A2.22;locus_tag=SCO6813
NC_003888.3	RefSeq	CDS	7574897	7575238	.	+	0	ID=cds6747;Parent=gene6875;Dbxref=Genbank:NP_630885.1,GeneID:1102252;Name=NP_630885.1;Note=SC1A2.22%2C possible ArsR-family transcriptional regulator%2C len: 129 aa. Highly similar to several including: Streptomyces coelicolor TR:Q9X8X8 (EMBL:AL078610) transcriptional regulator%2C SCH35.28C (122 aa)%2C fasta scores opt: 271 z-score: 365.4 E(): 6e-13 50.0%25 identity in 92 aa overlap and Mycobacterium tuberculosis TR:P71941 (EMBL:Z80225)  transcriptional regulator (126 aa)%2C fasta scores opt: 214 z-score: 291.6 E(): 7.7e-09 59.4%25 identity in 64 aa overlap. Also similar to the adjoining CDS SC1A2.21 (119 aa)%2C fasta scores opt: 292 z-score: 353.0 E(): 3.1e-14 51.1%25 identity in 94 aa overlap. Contains a Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=SC1A2.22;product=transcription regulator ArsR;protein_id=NP_630885.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7574981	7575229	.	+	.	ID=id8913;Dbxref=GeneID:1102252;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 74.40%2C E-value 2.3e-18;gbkey=misc_feature;gene=SC1A2.22
NC_003888.3	RefSeq	gene	7575359	7576030	.	-	.	ID=gene6876;Dbxref=GeneID:1102253;Name=SC1A2.23c;gbkey=Gene;gene=SC1A2.23c;gene_biotype=protein_coding;gene_synonym=SC1A2.23c;locus_tag=SCO6814
NC_003888.3	RefSeq	CDS	7575359	7576030	.	-	0	ID=cds6748;Parent=gene6876;Dbxref=Genbank:NP_630886.1,GeneID:1102253;Name=NP_630886.1;Note=SC1A2.23c%2C possible ABC transporter ATP-binding component%2C len: 223 aa. Similar to many ABC transporters including: Deinococcus radiodurans TR:AAF12204 (EMBL:AE001862) phosphate ABC transporter%2C ATP-binding protein (254 aa)%2C fasta scores opt: 458 z-score: 524.0 E(): 8.7e-22 38.1%25 identity in 210 aa overlap and Escherichia coli SW:PSTB_ECOLI (EMBL:X02723) phosphate ABC transporter%2C ATP-binding protein%2C PstB(257 aa)%2C fasta scores opt: 436 z-score: 499.3 E(): 2.1e-20 38.9%25 identity in 198 aa overlap. Contains Prosite hits to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a Pfam match to entry PF00005 ABC_tran%2C ABC transporter.;gbkey=CDS;gene=SC1A2.23c;product=ABC transporter ATP-binding protein;protein_id=NP_630886.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7575392	7575961	.	-	.	ID=id8914;Dbxref=GeneID:1102253;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 185.10%2C E-value 1.1e-51;gbkey=misc_feature;gene=SC1A2.23c
NC_003888.3	RefSeq	sequence_feature	7575572	7575616	.	-	.	ID=id8915;Dbxref=GeneID:1102253;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC1A2.23c
NC_003888.3	RefSeq	sequence_feature	7575917	7575940	.	-	.	ID=id8916;Dbxref=GeneID:1102253;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1A2.23c
NC_003888.3	RefSeq	gene	7576036	7577847	.	-	.	ID=gene6877;Dbxref=GeneID:1102254;Name=SC1A2.24c;gbkey=Gene;gene=SC1A2.24c;gene_biotype=protein_coding;gene_synonym=SC1A2.24c;locus_tag=SCO6815
NC_003888.3	RefSeq	CDS	7576036	7577847	.	-	0	ID=cds6749;Parent=gene6877;Dbxref=Genbank:NP_630887.1,GeneID:1102254;Name=NP_630887.1;Note=SC1A2.24c%2C bi-domain ABC transporter permease%2C len: 603 aa. The N-terminus and C-terminus appear to be discrete domains%2C both of which are similar to many ABC transporter permeases e.g. The N-terminus is similar to Methanobacterium thermoautotrophicum TR:O27762 (EMBL:AE000929) phosphate transporter permease (291 aa)%2C fasta scores opt: 467 z-score: 511.4 E(): 4.5e-21 32.5%25 identity in 268 aa overlap. The C-terminal is similar to Escherichia coli SW:PSTA_ECOLI (EMBL:X02723) phosphate transport system permease%2C PstA (296 aa)%2C fasta scores opt: 396 z-score: 434.6 E(): 8.4e-17 30.1%25 identity in 286 aa overlap. Contains 2x Prosite hits to PS00402 Binding-protein-dependent transport systems inner membrane comp sign and 2x Pfam matches to entries PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1A2.24c;product=ABC transporter permease;protein_id=NP_630887.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7576168	7576431	.	-	.	ID=id8917;Dbxref=GeneID:1102254;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 36.40%2C E-value 6.3e-07;gbkey=misc_feature;gene=SC1A2.24c
NC_003888.3	RefSeq	sequence_feature	7576342	7576428	.	-	.	ID=id8918;Dbxref=GeneID:1102254;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC1A2.24c
NC_003888.3	RefSeq	sequence_feature	7577086	7577316	.	-	.	ID=id8919;Dbxref=GeneID:1102254;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 36.30%2C E-value 7.2e-07;gbkey=misc_feature;gene=SC1A2.24c
NC_003888.3	RefSeq	sequence_feature	7577227	7577313	.	-	.	ID=id8920;Dbxref=GeneID:1102254;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC1A2.24c
NC_003888.3	RefSeq	gene	7577851	7578723	.	-	.	ID=gene6878;Dbxref=GeneID:1102255;Name=SC1A2.25c;gbkey=Gene;gene=SC1A2.25c;gene_biotype=protein_coding;gene_synonym=SC1A2.25c;locus_tag=SCO6816
NC_003888.3	RefSeq	CDS	7577851	7578723	.	-	0	ID=cds6750;Parent=gene6878;Dbxref=Genbank:NP_630888.1,GeneID:1102255;Name=NP_630888.1;Note=SC1A2.25c%2C possible ABC transporter binding lipoprotein%2C len: 290 aa. Similar to several including: Escherichia coli SW:PSTS_ECOLI (EMBL:K01992) phosphate-binding protein precursor (346 aa)%2C fasta scores opt: 158 z-score: 176.7 E(): 0.019 25.9%25 identity in 259 aa overlap and Methanobacterium thermoautotrophicum TR:O27760 (EMBL:AE000929) phosphate-binding protein%2C PstS (271 aa)%2C fasta scores opt: 510 z-score: 554.5 E(): 1.8e-23 34.9%25 identity in 281 aa overlap. Contains an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site%2C a Pfam match to entry PF01449 PstS%2C Phosphate-binding protein and a possible N-terminal signal sequence.;gbkey=CDS;gene=SC1A2.25c;product=ABC transporter binding lipoprotein;protein_id=NP_630888.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7577866	7578633	.	-	.	ID=id8921;Dbxref=GeneID:1102255;Note=Pfam match to entry PF01449 PstS%2C Phosphate-binding protein%2C score 81.40%2C E-value 1.8e-20;gbkey=misc_feature;gene=SC1A2.25c
NC_003888.3	RefSeq	sequence_feature	7578628	7578651	.	-	.	ID=id8922;Dbxref=GeneID:1102255;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC1A2.25c
NC_003888.3	RefSeq	sequence_feature	7578652	7578684	.	-	.	ID=id8923;Dbxref=GeneID:1102255;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC1A2.25c
NC_003888.3	RefSeq	gene	7579044	7579403	.	-	.	ID=gene6879;Dbxref=GeneID:1102256;Name=SC1A2.26c;gbkey=Gene;gene=SC1A2.26c;gene_biotype=protein_coding;gene_synonym=SC1A2.26c;locus_tag=SCO6817
NC_003888.3	RefSeq	CDS	7579044	7579403	.	-	0	ID=cds6751;Parent=gene6879;Dbxref=Genbank:NP_630889.1,GeneID:1102256;Name=NP_630889.1;Note=SC1A2.26c%2C unknown%2C len: 119 aa.;gbkey=CDS;gene=SC1A2.26c;product=hypothetical protein;protein_id=NP_630889.1;transl_table=11
NC_003888.3	RefSeq	gene	7579400	7580935	.	-	.	ID=gene6880;Dbxref=GeneID:1102257;Name=SC1A2.27c.;gbkey=Gene;gene=SC1A2.27c.;gene_biotype=protein_coding;gene_synonym=SC1A2.27c.;locus_tag=SCO6818
NC_003888.3	RefSeq	CDS	7579400	7580935	.	-	0	ID=cds6752;Parent=gene6880;Dbxref=Genbank:NP_630890.1,GeneID:1102257;Name=NP_630890.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;gene=SC1A2.27c.;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=NP_630890.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7579481	7579840	.	-	.	ID=id8924;Dbxref=GeneID:1102257;Note=Pfam match to entry PF01676 Metalloenzyme%2C Metalloenzyme superfamily%2C score 69.50%2C E-value 7e-17;gbkey=misc_feature;gene=SC1A2.27c.
NC_003888.3	RefSeq	gene	7580932	7582254	.	-	.	ID=gene6881;Dbxref=GeneID:1102258;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;gene_synonym=aroA;locus_tag=SCO6819
NC_003888.3	RefSeq	CDS	7580932	7582254	.	-	0	ID=cds6753;Parent=gene6881;Dbxref=Genbank:NP_630891.1,GeneID:1102258;Name=NP_630891.1;Note=catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis;gbkey=CDS;gene=aroA;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=NP_630891.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7580968	7582215	.	-	.	ID=id8925;Dbxref=GeneID:1102258;Note=Pfam match to entry PF00275 EPSP_synthase%2C EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)%2C score 442.90%2C E-value 2.7e-129;gbkey=misc_feature;gene=aroA
NC_003888.3	RefSeq	sequence_feature	7581157	7581213	.	-	.	ID=id8926;Dbxref=GeneID:1102258;Note=PS00885 EPSP synthase signature 2.;gbkey=misc_feature;gene=aroA
NC_003888.3	RefSeq	ribosome_entry_site	7582260	7582266	.	-	.	ID=id8927;gbkey=RBS
NC_003888.3	RefSeq	gene	7582309	7584639	.	-	.	ID=gene6882;Dbxref=GeneID:1102259;Name=SC1A2.29c;gbkey=Gene;gene=SC1A2.29c;gene_biotype=protein_coding;gene_synonym=SC1A2.29c;locus_tag=SCO6820
NC_003888.3	RefSeq	CDS	7582309	7584639	.	-	0	ID=cds6754;Parent=gene6882;Dbxref=Genbank:NP_630892.1,GeneID:1102259;Name=NP_630892.1;Note=SC1A2.29c%2C possible oxidoreductase%2C len: 776 aa. Similar to a number of formate dehydrogenases e.g. Escherichia coli SW:FDHF_ECOLI(EMBL:M13563) formate dehydrogenase H (EC 1.2.1.2) (715 aa)%2C fasta scores opt: 503 z-score: 564.0 E(): 5.2e-24 29.4%25 identity in 799 aa overlap. Contains Pfam matches to entries PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases and PF01568 Molydop_binding%2C Molydopterin dinucleotide binding domain.;gbkey=CDS;gene=SC1A2.29c;product=oxidoreductase;protein_id=NP_630892.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7582330	7582689	.	-	.	ID=id8928;Dbxref=GeneID:1102259;Note=Pfam match to entry PF01568 Molydop_binding%2C Molydopterin dinucleotide binding domain%2C score 54.10%2C E-value 3e-12;gbkey=misc_feature;gene=SC1A2.29c
NC_003888.3	RefSeq	sequence_feature	7583200	7583391	.	-	.	ID=id8929;Dbxref=GeneID:1102259;Note=Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 44.40%2C E-value 2.8e-13;gbkey=misc_feature;gene=SC1A2.29c
NC_003888.3	RefSeq	gene	7584942	7585664	.	-	.	ID=gene6883;Dbxref=GeneID:1102260;Name=SC1A2.30c;gbkey=Gene;gene=SC1A2.30c;gene_biotype=protein_coding;gene_synonym=SC1A2.30c;locus_tag=SCO6821
NC_003888.3	RefSeq	CDS	7584942	7585664	.	-	0	ID=cds6755;Parent=gene6883;Dbxref=Genbank:NP_630893.1,GeneID:1102260;Name=NP_630893.1;Note=SC1A2.30c%2C possible transferase%2C len: 240 aa. Weakly similar to the C-terminal glutamine amide transferase domain of several CTP synthases e.g. Escherichia coli SW:PYRG_ECOLI(EMBL:M12843) CTP synthase (EC 6.3.4.2) (544 aa)%2C fasta scores opt: 184 z-score: 227.2 E(): 3e-05 24.4%25 identity in 225 aa overlap.;gbkey=CDS;gene=SC1A2.30c;product=hypothetical protein;protein_id=NP_630893.1;transl_table=11
NC_003888.3	RefSeq	gene	7586410	7587975	.	+	.	ID=gene6884;Dbxref=GeneID:1102261;Name=SC1A2.31;gbkey=Gene;gene=SC1A2.31;gene_biotype=protein_coding;gene_synonym=SC1A2.31;locus_tag=SCO6822
NC_003888.3	RefSeq	CDS	7586410	7587975	.	+	0	ID=cds6756;Parent=gene6884;Dbxref=Genbank:NP_630894.1,GeneID:1102261;Name=NP_630894.1;Note=SC1A2.31%2C possible integral membrane efflux protein%2C len: 521 aa. Highly similar to many members of the drug resistance translocase family including: Streptomyces virginiae TR:Q9XE01 (EMBL:AB019519) virginiamycin S resistance protein%2C VarS (518 aa)%2C fasta scores opt: 1230 z-score: 1294.4 E():0 40.7%25 identity in 523 aa overlap and Streptomyces coelicolor TR:Q9Z563 (EMBL:AL035569) integral membrane efflux protein%2C SC8D9.28C (521 aa)%2C fasta scores opt: 1072 z-score: 1128.8 E():0 37.7%25 identity in 515 aa overlap. Contains a Prosite hit to PS00216 Sugar transport proteins signature 1 and a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter. Also contains a possible N-terminal signal sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1A2.31;product=integral membrane efflux protein;protein_id=NP_630894.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7586446	7587807	.	+	.	ID=id8930;Dbxref=GeneID:1102261;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -89.50%2C E-value 0.0011;gbkey=misc_feature;gene=SC1A2.31
NC_003888.3	RefSeq	sequence_feature	7586608	7586658	.	+	.	ID=id8931;Dbxref=GeneID:1102261;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC1A2.31
NC_003888.3	RefSeq	gene	7587993	7588445	.	+	.	ID=gene6885;Dbxref=GeneID:1102262;Name=SC1A2.32;gbkey=Gene;gene=SC1A2.32;gene_biotype=protein_coding;gene_synonym=SC1A2.32;locus_tag=SCO6823
NC_003888.3	RefSeq	CDS	7587993	7588445	.	+	0	ID=cds6757;Parent=gene6885;Dbxref=Genbank:NP_630895.1,GeneID:1102262;Name=NP_630895.1;Note=SC1A2.32%2C possible ArsR-family transcriptional regulator%2C len: 150 aa. Similar to several including: Sinorhizobium sp. As4 TR:AAD51845 (EMBL:AF178758) ArsR regulatory protein (115 aa)%2C fasta scores opt: 129 z-score: 168.5 E(): 0.056 29.1%25 identity in 103 aa overlap. Contains a Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family with a helix-turn-helix motif situated between residues 68..89 (+3.74 SD).;gbkey=CDS;gene=SC1A2.32;product=transcription regulator ArsR;protein_id=NP_630895.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7588134	7588385	.	+	.	ID=id8932;Dbxref=GeneID:1102262;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 35.80%2C E-value 1e-06;gbkey=misc_feature;gene=SC1A2.32
NC_003888.3	RefSeq	stem_loop	7588470	7588521	.	+	.	ID=id8933;Note=possible stem loop with 100%25 matches over 24 bases and a loop region of 4 bases.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7588532	7589635	.	-	.	ID=gene6886;Dbxref=GeneID:1102263;Name=SC1A2.33c;gbkey=Gene;gene=SC1A2.33c;gene_biotype=protein_coding;gene_synonym=SC1A2.33c,SC4A9.01c;locus_tag=SCO6824
NC_003888.3	RefSeq	CDS	7588532	7589635	.	-	0	ID=cds6758;Parent=gene6886;Dbxref=Genbank:NP_733715.1,GeneID:1102263;Name=NP_733715.1;Note=SC4A9.01c%2C possible phosphonopyruvate decarboxylase%2C partial CDS%2C len: >32 aa. Highly similar to Streptomyces coelicolor TR:Q9XBE9(EMBL:AL078635) phosphonopyruvate decarboxylase%2C CZA382.02 (371 aa)%2C fasta scores opt:95 z-score: 160.0 E():0.17 51.7%25 identity in 29 aa overlap. Overlaps and extends into CDS SC1A2.33c on the adjoining cosmid.~SC1A2.33c%2C possible phosphonopyruvate decarboxylase%2C partial CDS%2C len: >366 aa. Highly similar to several including: Streptomyces wedmorensis TR:Q56190(EMBL:AB016934) phosphonopyruvate decarboxylase (384 aa)%2C fasta scores opt: 391 z-score: 431.7 E(): 1.2e-16 37.8%25 identity in 347 aa overlap and Streptomyces coelicolor TR:Q9XBE9(EMBL:AL078635)  phosphonopyruvate decarboxylase%2C CZA382.02 (371 aa)%2C fasta scores opt: 1134 z-score: 1240.1 E(): 0 49.2%25 identity in 366 aa overlap. Contains a Prosite hit to PS00187 Thiamine pyrophosphate enzymes signature.;gbkey=CDS;gene=SC1A2.33c;product=phosphonopyruvate decarboxylase (fragment);protein_id=NP_733715.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7588880	7588939	.	-	.	ID=id8934;Dbxref=GeneID:1102263;Note=PS00187 Thiamine pyrophosphate enzymes signature;gbkey=misc_feature;gene=SC1A2.33c
NC_003888.3	RefSeq	sequence_feature	7589538	7589633	.	+	.	ID=id8935;Note=480 (+1) 1 96 St4A9;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7589632	7590327	.	-	.	ID=gene6887;Dbxref=GeneID:1102264;Name=SC4A9.02c;gbkey=Gene;gene=SC4A9.02c;gene_biotype=protein_coding;gene_synonym=SC4A9.02c;locus_tag=SCO6825
NC_003888.3	RefSeq	CDS	7589632	7590327	.	-	0	ID=cds6759;Parent=gene6887;Dbxref=Genbank:NP_630896.1,GeneID:1102264;Name=NP_630896.1;Note=SC4A9.02c%2C possible integral membrane protein%2C len: 231 aa. Highly to several proteins of undefined function including Escherichia coli SW:DEDA_ECOLI (EMBL:M68934) DedA hypothetical protein found in the hisT-purF region (219 aa)%2C fasta scores opt: 550 z-score: 642.2 E(): 2.3e-28 43.8%25 identity in 185 aa overlap and Streptomyces coelicolor TR:Q9X8J1 (EMBL:AL049841) possible membrane protein%2C SCE9.18c (303 aa)%2C fasta scores opt: 812 z-score: 940.8 E():0 53.7%25 identity in 227 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a Pfam match to entry PF00597 DedA%2C DedA family.;gbkey=CDS;gene=SC4A9.02c;product=hypothetical protein;protein_id=NP_630896.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7589770	7590264	.	-	.	ID=id8936;Dbxref=GeneID:1102264;Note=Pfam match to entry PF00597 DedA%2C DedA family%2C score 93.90%2C E-value 3.1e-24;gbkey=misc_feature;gene=SC4A9.02c
NC_003888.3	RefSeq	gene	7590412	7591452	.	-	.	ID=gene6888;Dbxref=GeneID:1102265;Name=SC4A9.03c;gbkey=Gene;gene=SC4A9.03c;gene_biotype=protein_coding;gene_synonym=SC4A9.03c;locus_tag=SCO6826
NC_003888.3	RefSeq	CDS	7590412	7591452	.	-	0	ID=cds6760;Parent=gene6888;Dbxref=Genbank:NP_630897.1,GeneID:1102265;Name=NP_630897.1;Note=SC4A9.03c%2C unknown%2C len: 346 aa. Similar to a protein of undefined function encoded within the Streptomyces peucetius daunorubicin-doxorubicin polyketide synthase gene cluster: TR:Q54816 (EMBL:L35560) DpsC (353 aa)%2C opt: 662 z-score: 779.9 E(): 0 36.0%25 identity in 344 aa overlap. Also similar to Streptomyces sp. TR:Q55225 (EMBL:L34880) OrfC%2C a beta-keto acyl synthase III homologue (352 aa)%2C fasta scores opt: 599 z-score: 706.2 E(): 6.3e-32 33.4%25 identity in 341 aa overlap;gbkey=CDS;gene=SC4A9.03c;product=hypothetical protein;protein_id=NP_630897.1;transl_table=11
NC_003888.3	RefSeq	gene	7591479	7598555	.	-	.	ID=gene6889;Dbxref=GeneID:1102266;Name=SC4A9.04c;gbkey=Gene;gene=SC4A9.04c;gene_biotype=protein_coding;gene_synonym=SC4A9.04c;locus_tag=SCO6827
NC_003888.3	RefSeq	CDS	7591479	7598555	.	-	0	ID=cds6761;Parent=gene6889;Dbxref=Genbank:NP_630898.1,GeneID:1102266;Name=NP_630898.1;Note=SC4A9.04c%2C polyketide synthase%2C len: 2358 aa. Highly similar to many including: Stigmatella aurantiaca TR:AAF19813(EMBL:AF188287) polyketide synthase%2C MtAE%2C found within the Myxothiazol biosynthetic gene cluster (1947 aa)%2C fasta scores opt: 2671 z-score: 2436.5 E():0 35.8%25 identity in 1770 aa overlap and Mycobacterium tuberculosis SW:PPSA_MYCTU(EMBL:Z74697) phenolpthiocerol synthesis polyketide synthase gene%2C PpsA (1876 aa)%2C fasta scores opt: 2221 z-score: 2025.5 E(): 0 33.6%25 identity in 1761 aa overlap. Contains Prosite hits to PS00606 Beta-ketoacyl synthases active site and 2xPS00012 Phosphopantetheine attachment site. Also contains Pfam matches to entries PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C PF00698 Acyl_transf%2C Acyl transferase domain%2C PF00107 adh_zinc%2C Zinc-binding dehydrogenases and 2xPF00550 pp-binding%2C Phosphopantetheine attachment site. The 72 amino acids%2C 2139..2210%2C are perfectly repeated between residues 2280..2351 in the C-terminus of this protein.;gbkey=CDS;gene=SC4A9.04c;product=polyketide synthase;protein_id=NP_630898.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7591503	7591718	.	-	.	ID=id8937;Dbxref=GeneID:1102266;Note=duplicated sequence which is 99.52%25 identical to repeat region complement (2389..2601).;gbkey=repeat_region;gene=SC4A9.04c
NC_003888.3	RefSeq	sequence_feature	7591515	7591715	.	-	.	ID=id8938;Dbxref=GeneID:1102266;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 49.70%2C E-value 4.1e-12;gbkey=misc_feature;gene=SC4A9.04c
NC_003888.3	RefSeq	sequence_feature	7591593	7591640	.	-	.	ID=id8939;Dbxref=GeneID:1102266;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=SC4A9.04c
NC_003888.3	RefSeq	repeat_region	7591926	7592141	.	-	.	ID=id8940;Dbxref=GeneID:1102266;Note=duplicated sequence which is 99.52%25 identical to repeat region complement (1966..2178).;gbkey=repeat_region;gene=SC4A9.04c
NC_003888.3	RefSeq	sequence_feature	7591938	7592138	.	-	.	ID=id8941;Dbxref=GeneID:1102266;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 49.70%2C E-value 4.1e-12;gbkey=misc_feature;gene=SC4A9.04c
NC_003888.3	RefSeq	sequence_feature	7592016	7592063	.	-	.	ID=id8942;Dbxref=GeneID:1102266;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC4A9.04c
NC_003888.3	RefSeq	sequence_feature	7593210	7594154	.	-	.	ID=id8943;Dbxref=GeneID:1102266;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score -17.90%2C E-value 8.5e-09;gbkey=misc_feature;gene=SC4A9.04c
NC_003888.3	RefSeq	sequence_feature	7595958	7596920	.	-	.	ID=id8944;Dbxref=GeneID:1102266;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 395.00%2C E-value 7.3e-115;gbkey=misc_feature;gene=SC4A9.04c
NC_003888.3	RefSeq	sequence_feature	7597236	7598510	.	-	.	ID=id8945;Dbxref=GeneID:1102266;Note=Pfam match to entry PF00109 ketoacyl-synt%2C Beta-ketoacyl synthase%2C score 629.70%2C E-value 1.6e-185;gbkey=misc_feature;gene=SC4A9.04c
NC_003888.3	RefSeq	sequence_feature	7597980	7598030	.	-	.	ID=id8946;Dbxref=GeneID:1102266;Note=PS00606 Beta-ketoacyl synthases active site;gbkey=misc_feature;gene=SC4A9.04c
NC_003888.3	RefSeq	gene	7599249	7600730	.	+	.	ID=gene6890;Dbxref=GeneID:1102267;Name=SC4A9.05;gbkey=Gene;gene=SC4A9.05;gene_biotype=protein_coding;gene_synonym=SC4A9.05;locus_tag=SCO6828
NC_003888.3	RefSeq	CDS	7599249	7600730	.	+	0	ID=cds6762;Parent=gene6890;Dbxref=Genbank:NP_630899.1,GeneID:1102267;Name=NP_630899.1;Note=SC4A9.05%2C possible hypothetical protein%2C len: 493 aa. Highly similar to Streptomyces coelicolor hypothetical protein SC1A2.20c (464 aa)%2C fasta scores opt: 1389 z-score: 1246.8 E():0 51.0%25 identity in 455 aa overlap. Also weakly similar to Streptomyces coelicolor TR:CAB52349(EMBL:AL109747) flavin-containing monooxygenase (458 aa)%2C fasta scores opt: 151 z-score: 166.3 E(): 0.075 24.2%25 identity in 414 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC4A9.05;product=hypothetical protein;protein_id=NP_630899.1;transl_table=11
NC_003888.3	RefSeq	gene	7600790	7601569	.	-	.	ID=gene6891;Dbxref=GeneID:1102268;Name=SC4A9.06c;gbkey=Gene;gene=SC4A9.06c;gene_biotype=protein_coding;gene_synonym=SC4A9.06c;locus_tag=SCO6829
NC_003888.3	RefSeq	CDS	7600790	7601569	.	-	0	ID=cds6763;Parent=gene6891;Dbxref=Genbank:NP_630900.1,GeneID:1102268;Name=NP_630900.1;Note=SC4A9.06c%2C possible oxidoreductase%2C len: 259 aa. Highly similar to Streptomyces coelicolor TR:Q9X890(EMBL:AL049707)  oxidoreductase%2C SCE15.15 (260 aa)%2C fasta scores opt: 1088 z-score: 1221.9 E(): 0 66.9%25 identity in 254 aa overlap. Also similar to Streptomyces griseus subsp. griseus TR:Q9XDF5(EMBL:AF074603) ketoacyl reductase (271 aa)%2C fasta scores opt: 421 z-score: 479.1 E(): 2.8e-19 36.7%25 identity in 256 aa overlap. Contains a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature and a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SC4A9.06c;product=oxidoreductase;protein_id=NP_630900.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7600991	7601536	.	-	.	ID=id8947;Dbxref=GeneID:1102268;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 202.80%2C E-value 5.1e-57;gbkey=misc_feature;gene=SC4A9.06c
NC_003888.3	RefSeq	sequence_feature	7601054	7601140	.	-	.	ID=id8948;Dbxref=GeneID:1102268;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SC4A9.06c
NC_003888.3	RefSeq	gene	7601654	7602007	.	+	.	ID=gene6892;Dbxref=GeneID:1102269;Name=SC4A9.07;gbkey=Gene;gene=SC4A9.07;gene_biotype=protein_coding;gene_synonym=SC4A9.07;locus_tag=SCO6830
NC_003888.3	RefSeq	CDS	7601654	7602007	.	+	0	ID=cds6764;Parent=gene6892;Dbxref=Genbank:NP_630901.1,GeneID:1102269;Name=NP_630901.1;Note=SC4A9.07%2C possible ArsR-family transcriptional regulator%2C len: 117 aa. Highly similar to Streptomyces coelicolor TR:Q9X8X8 (EMBL:AL078610) transcriptional regulator SCH35.28C (122 aa)%2C fasta scores opt: 561 z-score: 746.6 E():0 78.0%25 identity in 109 aa overlap and Mycobacterium tuberculosis TR:P71941 (EMBL:Z80225) transcriptional regulator (126 aa)%2C fasta scores opt: 359 z-score: 482.6 E(): 1.8e-19 56.9%25 identity in 116 aa overlap. Also similar to several other Streptomyces coelicolor ArsR-family transcriptional regulators including: SC1A2.21 (119 aa)%2C fasta scores opt: 491 z-score: 582.6 E(): 5.2e-27 64.7%25 identity in 116 aa overlap and SC1A2.17c (120 aa)%2C fasta scores opt: 295 z-score: 356.1 E(): 2.1e-14 45.5%25 identity in 99 aa overlap. Contains a Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=SC4A9.07;product=transcription regulator ArsR;protein_id=NP_630901.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7601762	7602001	.	+	.	ID=id8949;Dbxref=GeneID:1102269;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 91.70%2C E-value 1.4e-23;gbkey=misc_feature;gene=SC4A9.07
NC_003888.3	RefSeq	gene	7602498	7602773	.	+	.	ID=gene6893;Dbxref=GeneID:1102270;Name=SC4A9.08;gbkey=Gene;gene=SC4A9.08;gene_biotype=protein_coding;gene_synonym=SC4A9.08;locus_tag=SCO6831
NC_003888.3	RefSeq	CDS	7602498	7602773	.	+	0	ID=cds6765;Parent=gene6893;Dbxref=Genbank:NP_630902.1,GeneID:1102270;Name=NP_630902.1;Note=SC4A9.08%2C unknown%2C len: 91 aa.;gbkey=CDS;gene=SC4A9.08;product=hypothetical protein;protein_id=NP_630902.1;transl_table=11
NC_003888.3	RefSeq	gene	7602829	7604424	.	+	.	ID=gene6894;Dbxref=GeneID:1102271;Name=mutA;gbkey=Gene;gene=mutA;gene_biotype=protein_coding;gene_synonym=mutA;locus_tag=SCO6832
NC_003888.3	RefSeq	CDS	7602829	7604424	.	+	0	ID=cds6766;Parent=gene6894;Dbxref=Genbank:NP_630903.1,GeneID:1102271;Name=NP_630903.1;Note=SC4A9.09%2C mutA%2C methylmalonyl-CoA mutase (EC 5.4.99.2)%2C len: 531 aa. Highly similar to many members of the methylmalonyll-CoA mutase family including: Sinorhizobium meliloti TR:O86028(EMBL:AF080073) methylmalonyll-CoA mutase (EC 5.4.99.2) (712 aa)%2C fasta scores opt: 1720 z-score: 1946.7 E(): 0 52.2%25 identity in 515 aa overlap and Pyrococcus abyssi TR:CAB49756(EMBL:AJ248285) methylmalonyl-CoA mutase%2C subunit alpha%2C N-terminus (562 aa)%2C fasta scores opt: 2180 z-score: 2469.0 E():0 62.7%25 identity in 518 aa overlap. Also highly similar to Streptomyces coelicolor TR:Q9X949(EMBL:AJ237976) isobutyryl-CoA mutase A (EC 5.4.99.13)%2C SC8F4.19 (566 aa)%2C fasta scores opt: 1515 z-score: 1556.8 E():0 50.5%25 identity in 541 aa overlap. Contains a Pfam match to entry PF01642 MM_CoA_mutase%2C Methylmalonyl-CoA mutase.;gbkey=CDS;gene=mutA;product=methylmalonyll-CoA mutase;protein_id=NP_630903.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7602970	7604421	.	+	.	ID=id8950;Dbxref=GeneID:1102271;Note=Pfam match to entry PF01642 MM_CoA_mutase%2C Methylmalonyl-CoA mutase%2C score 864.90%2C E-value 2.6e-256;gbkey=misc_feature;gene=mutA
NC_003888.3	RefSeq	ribosome_entry_site	7604455	7604459	.	+	.	ID=id8951;gbkey=RBS
NC_003888.3	RefSeq	gene	7604468	7604947	.	+	.	ID=gene6895;Dbxref=GeneID:1102272;Name=SC3D9.01;gbkey=Gene;gene=SC3D9.01;gene_biotype=protein_coding;gene_synonym=SC3D9.01;locus_tag=SCO6833
NC_003888.3	RefSeq	CDS	7604468	7604947	.	+	0	ID=cds6767;Parent=gene6895;Dbxref=Genbank:NP_630904.1,GeneID:1102272;Name=NP_630904.1;Note=SC3D9.01%2C probable isobutyryl-CoA mutase%2C small subunit (EC 5.4.99.13)%2C len: 159 aa. Highly similar to Streptomyces cinnamonensis TR:CAB59633 (EMBL:AJ246005) isobutyryl-CoA mutase%2C small subunit (EC 5.4.99.13) (136 aa)%2C fasta scores opt: 580 z-score: 685.3 E(): 9.2e-31 68.3%25 identity in 126 aa overlap and to the C-terminus of Streptomyces cinnamonensis SW:MUTB_STRCM (EMBL:L10064) methylmalonyl-CoA mutase alpha-subunit (EC 5.4.99.2) (733 aa)%2C fasta scores opt: 291 z-score: 341.2 E(): 1.4e-11 40.5%25 identity in 111 aa overlap.;gbkey=CDS;gene=SC3D9.01;product=isobutyryl-CoA mutase%2C small subunit;protein_id=NP_630904.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7605225	7607024	.	-	.	ID=id8952;Note=previously sequenced and shares 100 %25 identity with S.coelicolor (EMBL:AJ251005) arsC gene%2C trxB gene and arsR gene locus.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7605261	7606241	.	-	.	ID=gene6896;Dbxref=GeneID:1102273;Name=trxB2;gbkey=Gene;gene=trxB2;gene_biotype=protein_coding;gene_synonym=trxB2;locus_tag=SCO6834
NC_003888.3	RefSeq	CDS	7605261	7606241	.	-	0	ID=cds6768;Parent=gene6896;Dbxref=Genbank:NP_630905.1,GeneID:1102273;Name=NP_630905.1;Note=SC3D9.02c%2C trxB2%2C possible thioredoxin reductase (326 aa). Previously sequenced and consequently identical to Streptomyces coelicolor TR:CAB61258 (EMBL:AJ251005). Also highly similar to the other Streptomyces coelicolor trxB CDS: SW:TRXB_STRCO( EMBL:X92105) thioredoxin reductase (EC 1.6.4.5) SCH24.12 (321 aa)%2C fasta scores opt: 1547 z-score: 1709.6 E():0 74.2%25 identity in 310 aa overlap. Contains a Prosite hit to PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site.;gbkey=CDS;gene=trxB2;product=thioredoxin reductase;protein_id=NP_630905.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7605765	7605827	.	-	.	ID=id8953;Dbxref=GeneID:1102273;Note=PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site;gbkey=misc_feature;gene=trxB2
NC_003888.3	RefSeq	gene	7606238	7606651	.	-	.	ID=gene6897;Dbxref=GeneID:1102274;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;gene_synonym=arsC;locus_tag=SCO6835
NC_003888.3	RefSeq	CDS	7606238	7606651	.	-	0	ID=cds6769;Parent=gene6897;Dbxref=Genbank:NP_630906.1,GeneID:1102274;Name=NP_630906.1;Note=SC3D9.03c%2C arsC%2C possible arsenate reductase%2C len: 137 aa. Previously sequenced and consequently identical to Streptomyces coelicolor TR:CAB61257(EMBL:AJ251005). Also highly similar to Streptomyces coelicolor TR:Q9X8Y2(EMBL:AL078610) heavy metal reductase%2C SCH35.24C (137 aa)%2C fasta scores opt: 863 z-score: 986.3 E(): 0 92.7%25 identity in 137 aa overlap. Contains a Pfam match to entry PF01451 LMWPc%2C Low molecular weight phosphotyrosine protein phosphatase.;gbkey=CDS;gene=arsC;product=arsenate reductase;protein_id=NP_630906.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7606262	7606639	.	-	.	ID=id8954;Dbxref=GeneID:1102274;Note=Pfam match to entry PF01451 LMWPc%2C Low molecular weight phosphotyrosine protein phosphatase%2C score 144.50%2C E-value 1.8e-39;gbkey=misc_feature;gene=arsC
NC_003888.3	RefSeq	gene	7606744	7607052	.	+	.	ID=gene6898;Dbxref=GeneID:1102275;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;gene_synonym=arsR,SC3D9.04;locus_tag=SCO6836
NC_003888.3	RefSeq	CDS	7606744	7607052	.	+	0	ID=cds6770;Parent=gene6898;Dbxref=Genbank:NP_630907.1,GeneID:1102275;Name=NP_630907.1;Note=SC3D9.04%2C arsR%2C possible ArsR-family transcriptional regulator%2C len: 102 aa. Previously partially sequenced and consequently identical to Streptomyces coelicolor TR:CAB61256 (EMBL:AJ251005)  transcriptional regulator (fragment) (>93 aa). Also highly similar to Streptomyces coelicolor TR:Q9X8Y1(EMBL:AL078610) transcriptional regulator%2C SCH35.25 (102 aa)%2C fasta scores opt: 617 z-score: 838.5 E(): 0 95.1%25 identity in 102 aa overlap. Contains a Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family.;gbkey=CDS;gene=arsR;product=transcription regulator ArsR;protein_id=NP_630907.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7606771	7607004	.	+	.	ID=id8955;Dbxref=GeneID:1102275;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 52.00%2C E-value 1.3e-11;gbkey=misc_feature;gene=arsR
NC_003888.3	RefSeq	gene	7607049	7608155	.	+	.	ID=gene6899;Dbxref=GeneID:1102276;Name=SC3D9.05;gbkey=Gene;gene=SC3D9.05;gene_biotype=protein_coding;gene_synonym=SC3D9.05;locus_tag=SCO6837
NC_003888.3	RefSeq	CDS	7607049	7608155	.	+	0	ID=cds6771;Parent=gene6899;Dbxref=Genbank:NP_630908.1,GeneID:1102276;Name=NP_630908.1;Note=SC3D9.05%2C possible arsenic resistance membrane transport protein%2C len: 368 aa. Highly similar to Streptomyces coelicolor TR:Q9X8Y0(EMBL:AL078610) heavy metal resistance membrane protein%2C SCH35.26 (369 aa)%2C fasta scores opt: 2304 z-score: 2675.9 E(): 0 95.4%25 identity in 369 aa overlap and Sinorhizobium sp. As4. TR:AAD51846(EMBL:AF178758) membrane subunit of arsenic oxyanion-translocation pump%2C ArsB (351 aa)%2C fasta scores opt: 1263 z-score: 1469.8 E():0 53.8%25 identity in 344 aa overlap. Contains possible membrane spanning hydrophobic domains and a Pfam match to entry PF01758 SBF%2C Sodium Bile acid symporter family.;gbkey=CDS;gene=SC3D9.05;product=arsenic resistance membrane transport protein;protein_id=NP_630908.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7607238	7607834	.	+	.	ID=id8956;Dbxref=GeneID:1102276;Note=Pfam match to entry PF01758 SBF%2C Sodium Bile acid symporter family%2C score 252.90%2C E-value 4.3e-72;gbkey=misc_feature;gene=SC3D9.05
NC_003888.3	RefSeq	gene	7608214	7609278	.	+	.	ID=gene6900;Dbxref=GeneID:1102277;Name=SC3D9.06;gbkey=Gene;gene=SC3D9.06;gene_biotype=protein_coding;gene_synonym=SC3D9.06;locus_tag=SCO6838
NC_003888.3	RefSeq	CDS	7608214	7609278	.	+	0	ID=cds6772;Parent=gene6900;Dbxref=Genbank:NP_630909.1,GeneID:1102277;Name=NP_630909.1;Note=SC3D9.06%2C possible monooxygenase%2C len: 354 aa. Highly similar to Streptomyces coelicolor TR:Q9X8X9(EMBL:AL078610)  oxidoreductase%2C SCH35.27 (406 aa)%2C fasta scores opt: 1377 z-score: 1503.9 E():0 66.7%25 identity in 327 aa overlap. Also similar to Streptomyces coelicolor TR:CAB59668(EMBL:AL132674) monooxygenase%2C SCE87.23C (519 aa)%2C fasta scores opt: 355 z-score: 390.5 E(): 2.4e-14 28.6%25 identity in 371 aa overlap. Contains a Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like.;gbkey=CDS;gene=SC3D9.06;product=monooxygenase;protein_id=NP_630909.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7608232	7609263	.	+	.	ID=id8957;Dbxref=GeneID:1102277;Note=Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like%2C score -301.00%2C E-value 2.4e-06;gbkey=misc_feature;gene=SC3D9.06
NC_003888.3	RefSeq	gene	7609452	7610765	.	-	.	ID=gene6901;Dbxref=GeneID:1102278;Name=SC3D9.07c;gbkey=Gene;gene=SC3D9.07c;gene_biotype=protein_coding;gene_synonym=SC3D9.07c;locus_tag=SCO6839
NC_003888.3	RefSeq	CDS	7609452	7610765	.	-	0	ID=cds6773;Parent=gene6901;Dbxref=Genbank:NP_630910.1,GeneID:1102278;Name=NP_630910.1;Note=SC3D9.07c%2C unknown%2C len: 437 aa.;gbkey=CDS;gene=SC3D9.07c;product=hypothetical protein;protein_id=NP_630910.1;transl_table=11
NC_003888.3	RefSeq	gene	7610762	7612807	.	-	.	ID=gene6902;Dbxref=GeneID:1102279;Name=SC3D9.08c;gbkey=Gene;gene=SC3D9.08c;gene_biotype=protein_coding;gene_synonym=SC3D9.08c;locus_tag=SCO6840
NC_003888.3	RefSeq	CDS	7610762	7612807	.	-	0	ID=cds6774;Parent=gene6902;Dbxref=Genbank:NP_630911.1,GeneID:1102279;Name=NP_630911.1;Note=SC3D9.08c%2C unknown%2C len: 681 aa.;gbkey=CDS;gene=SC3D9.08c;product=hypothetical protein;protein_id=NP_630911.1;transl_table=11
NC_003888.3	RefSeq	gene	7613335	7614387	.	+	.	ID=gene6903;Dbxref=GeneID:1102280;Name=SC3D9.09;gbkey=Gene;gene=SC3D9.09;gene_biotype=protein_coding;gene_synonym=SC3D9.09;locus_tag=SCO6841
NC_003888.3	RefSeq	CDS	7613335	7614387	.	+	0	ID=cds6775;Parent=gene6903;Dbxref=Genbank:NP_630912.1,GeneID:1102280;Name=NP_630912.1;Note=SC3D9.09%2C unknown%2C len: 350 aa. Similar to Streptomyces coelicolor TR:Q9X865 (EMBL:AL049661) hypothetical protein SCE134.10 (320 aa)%2C fasta scores opt: 589 z-score: 714.3 E(): 2.2e-32 46.0%25 identity in 313 aa overlap;gbkey=CDS;gene=SC3D9.09;product=hypothetical protein;protein_id=NP_630912.1;transl_table=11
NC_003888.3	RefSeq	gene	7614564	7615928	.	-	.	ID=gene6904;Dbxref=GeneID:1102281;Name=SC3D9.10c;gbkey=Gene;gene=SC3D9.10c;gene_biotype=protein_coding;gene_synonym=SC3D9.10c;locus_tag=SCO6842
NC_003888.3	RefSeq	CDS	7614564	7615928	.	-	0	ID=cds6776;Parent=gene6904;Dbxref=Genbank:NP_630913.1,GeneID:1102281;Name=NP_630913.1;Note=SC3D9.10c%2C unknown%2C len: 454 aa.;gbkey=CDS;gene=SC3D9.10c;product=hypothetical protein;protein_id=NP_630913.1;transl_table=11
NC_003888.3	RefSeq	gene	7615994	7617112	.	-	.	ID=gene6905;Dbxref=GeneID:1102282;Name=SC3D9.11c;gbkey=Gene;gene=SC3D9.11c;gene_biotype=protein_coding;gene_synonym=SC3D9.11c;locus_tag=SCO6843
NC_003888.3	RefSeq	CDS	7615994	7617112	.	-	0	ID=cds6777;Parent=gene6905;Dbxref=Genbank:NP_630914.1,GeneID:1102282;Name=NP_630914.1;Note=SC3D9.11c%2C unknown%2C len: 372 aa. Weakly similar to Streptomyces coelicolor TR:Q9X8A4 (EMBL:AL049645) hypothetical protein%2C SCE2.09 (386 aa)%2C fasta scores opt: 559 z-score: 616.2 E(): 6.5e-27%3B 37.5%25 identity in 363 aa overlap;gbkey=CDS;gene=SC3D9.11c;product=hypothetical protein;protein_id=NP_630914.1;transl_table=11
NC_003888.3	RefSeq	gene	7617112	7618383	.	-	.	ID=gene6906;Dbxref=GeneID:1102283;Name=SC3D9.12c;gbkey=Gene;gene=SC3D9.12c;gene_biotype=protein_coding;gene_synonym=SC3D9.12c;locus_tag=SCO6844
NC_003888.3	RefSeq	CDS	7617112	7618383	.	-	0	ID=cds6778;Parent=gene6906;Dbxref=Genbank:NP_630915.1,GeneID:1102283;Name=NP_630915.1;Note=SC3D9.12c%2C possible DNA methylase%2C len: 423 aa. Weakly similar to Salmonella infantis SW:MTSI_SALIN(EMBL:J03391) modification methylase%2C SinI (EC 2.1.1.73) (461 aa)%2C fasta scores opt: 244 z-score: 269.9 E(): 1.3e-07 24.5%25 identity in 355 aa overlap. Contains 2xPfam matches to entries PF00145 DNA_methylase%2C C-5 cytosine-specific DNA methylase.;gbkey=CDS;gene=SC3D9.12c;product=DNA methylase;protein_id=NP_630915.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7617151	7617294	.	-	.	ID=id8958;Dbxref=GeneID:1102283;Note=Pfam match to entry PF00145 DNA_methylase%2C C-5 cytosine-specific DNA methylase%2C score 33.40%2C E-value 2.2e-08;gbkey=misc_feature;gene=SC3D9.12c
NC_003888.3	RefSeq	sequence_feature	7617832	7617912	.	-	.	ID=id8959;Dbxref=GeneID:1102283;Note=Pfam match to entry PF00145 DNA_methylase%2C C-5 cytosine-specific DNA methylase%2C score 17.60%2C E-value 0.00051;gbkey=misc_feature;gene=SC3D9.12c
NC_003888.3	RefSeq	gene	7618380	7619000	.	-	.	ID=gene6907;Dbxref=GeneID:1102284;Name=SC3D9.13c;gbkey=Gene;gene=SC3D9.13c;gene_biotype=protein_coding;gene_synonym=SC3D9.13c;locus_tag=SCO6845
NC_003888.3	RefSeq	CDS	7618380	7619000	.	-	0	ID=cds6779;Parent=gene6907;Dbxref=Genbank:NP_630916.1,GeneID:1102284;Name=NP_630916.1;Note=SC3D9.13c%2C unknown%2C len: 206 aa. Similar in parts to Agrobacterium tumefaciens (Ti plasmid pTiC58) TR:BAA87688 (EMBL:AB016260) hypothetical protein%2C TiOrf63 (312 aa)%2C fasta scores opt: 466 z-score: 575.5 E(): 1.2e-24 44.3%25 identity in 167 aa overlap.;gbkey=CDS;gene=SC3D9.13c;product=hypothetical protein;protein_id=NP_630916.1;transl_table=11
NC_003888.3	RefSeq	gene	7619557	7619880	.	-	.	ID=gene6908;Dbxref=GeneID:1102285;Name=SC3D9.14c;gbkey=Gene;gene=SC3D9.14c;gene_biotype=protein_coding;gene_synonym=SC3D9.14c;locus_tag=SCO6846
NC_003888.3	RefSeq	CDS	7619557	7619880	.	-	0	ID=cds6780;Parent=gene6908;Dbxref=Genbank:NP_630917.1,GeneID:1102285;Name=NP_630917.1;Note=SC3D9.14c%2C unknown%2C len: 107 aa.;gbkey=CDS;gene=SC3D9.14c;product=hypothetical protein;protein_id=NP_630917.1;transl_table=11
NC_003888.3	RefSeq	gene	7620290	7620910	.	-	.	ID=gene6909;Dbxref=GeneID:1102286;Name=SC3D9.15c;gbkey=Gene;gene=SC3D9.15c;gene_biotype=protein_coding;gene_synonym=SC3D9.15c;locus_tag=SCO6847
NC_003888.3	RefSeq	CDS	7620290	7620910	.	-	0	ID=cds6781;Parent=gene6909;Dbxref=Genbank:NP_630918.1,GeneID:1102286;Name=NP_630918.1;Note=SC3D9.15c%2C unknown%2C len: 206 aa. Contains a 24 amino acid direct repeat (ATYRTVSRRLSRRLASFSARAEDR) between residues 129..152 and 154..177.;gbkey=CDS;gene=SC3D9.15c;product=hypothetical protein;protein_id=NP_630918.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7620380	7620451	.	-	.	ID=id8960;Dbxref=GeneID:1102286;Note=duplicated sequence which is 100 %25 identical to repeat region complement(16040..16111).;gbkey=repeat_region;gene=SC3D9.15c
NC_003888.3	RefSeq	repeat_region	7620455	7620526	.	-	.	ID=id8961;Dbxref=GeneID:1102286;Note=duplicated sequence which is 100 %25 identical to repeat region complement(15965..16036).;gbkey=repeat_region;gene=SC3D9.15c
NC_003888.3	RefSeq	gene	7621003	7621461	.	-	.	ID=gene6910;Dbxref=GeneID:1102287;Name=SC3D9.16c;gbkey=Gene;gene=SC3D9.16c;gene_biotype=protein_coding;gene_synonym=SC3D9.16c;locus_tag=SCO6848
NC_003888.3	RefSeq	CDS	7621003	7621461	.	-	0	ID=cds6782;Parent=gene6910;Dbxref=Genbank:NP_630919.1,GeneID:1102287;Name=NP_630919.1;Note=SC3D9.16c%2C unknown%2C len: 152 aa%3B similar to TR:Q9PCL6 (EMBL:AE003998) Xylella fastidiosa hypothetical protein XF1762%2C 172 aa%3B fasta scores: opt: 501 Z-score: 598.8 E(): 1e-25%3B 55.484%25 identity in 155 aa overlap;gbkey=CDS;gene=SC3D9.16c;product=hypothetical protein;protein_id=NP_630919.1;transl_table=11
NC_003888.3	RefSeq	gene	7621458	7623185	.	-	.	ID=gene6911;Dbxref=GeneID:1102288;Name=SC3D9.17c;gbkey=Gene;gene=SC3D9.17c;gene_biotype=protein_coding;gene_synonym=SC3D9.17c,SC7F9.01c;locus_tag=SCO6849
NC_003888.3	RefSeq	CDS	7621458	7623185	.	-	0	ID=cds6783;Parent=gene6911;Dbxref=Genbank:NP_733716.1,GeneID:1102288;Name=NP_733716.1;Note=SC7F9.01c%2C possible membrane protein%2C partial CDS%2C len: > 373 aa. Highly similar to Streptomyces coelicolor TR:Q9X8A2(EMBL:AL049645) hypothetical 45.0 KD protein%2C SCE2.07 (427 aa)%2C fasta scores opt: 1024 z-score: 1198.6 E():0 68.8%25 identity in 224 aa overlap. Contains a possible membrane spanning hydrophobic domain.~SC3D9.17c%2C unknown%2C partial CDS%2C len:> 235 aa. Highly similar to Streptomyces coelicolor TR:Q9X8A2(EMBL:AL049645) hypothetical protein%2C SCE2.07 (427 aa)%2C fasta scores opt: 1120 z-score: 1326.9 E():0 71.8%25 identity in 234 aa overlap.;gbkey=CDS;gene=SC3D9.17c;product=hypothetical protein;protein_id=NP_733716.1;transl_table=11
NC_003888.3	RefSeq	gene	7623285	7624064	.	-	.	ID=gene6912;Dbxref=GeneID:1102289;Name=SC7F9.02c;gbkey=Gene;gene=SC7F9.02c;gene_biotype=protein_coding;gene_synonym=SC7F9.02c;locus_tag=SCO6850
NC_003888.3	RefSeq	CDS	7623285	7624064	.	-	0	ID=cds6784;Parent=gene6912;Dbxref=Genbank:NP_630920.1,GeneID:1102289;Name=NP_630920.1;Note=SC7F9.02c%2C unknown%2C len: 259 aa. Similar to other hypothetical proteins predicted to be encoded by CDS located on this cosmid: SC7F9.04c (273 aa)%2C fasta scores opt: 442 z-score: 398.4 E(): 9.8e-17 33.7%25 identity in 255 aa overlap and SC7F9.06c (267 aa)%2C fasta scores opt: 385 z-score: 348.6 E(): 5.8e-14 34.6%25 identity in 257 aa overlap;gbkey=CDS;gene=SC7F9.02c;product=hypothetical protein;protein_id=NP_630920.1;transl_table=11
NC_003888.3	RefSeq	gene	7624067	7624633	.	-	.	ID=gene6913;Dbxref=GeneID:1102290;Name=SC7F9.03c;gbkey=Gene;gene=SC7F9.03c;gene_biotype=protein_coding;gene_synonym=SC7F9.03c;locus_tag=SCO6851
NC_003888.3	RefSeq	CDS	7624067	7624633	.	-	0	ID=cds6785;Parent=gene6913;Dbxref=Genbank:NP_630921.1,GeneID:1102290;Name=NP_630921.1;Note=SC7F9.03c%2C unknown%2C len: 188 aa. Weakly similar to Streptomyces coelicolor TR:Q9X874 (EMBL:AL049661) hypothetical protein%2C SCE134.19 (211 aa)%2C fasta scores opt: 124 z-score: 162.0 E(): 0.13 24.0%25 identity in 150 aa overlap.;gbkey=CDS;gene=SC7F9.03c;product=hypothetical protein;protein_id=NP_630921.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7624067	7624075	.	-	.	ID=id8962;Dbxref=GeneID:1102290;gbkey=RBS;gene=SC7F9.03c
NC_003888.3	RefSeq	gene	7624664	7625485	.	-	.	ID=gene6914;Dbxref=GeneID:1102291;Name=SC7F9.04c;gbkey=Gene;gene=SC7F9.04c;gene_biotype=protein_coding;gene_synonym=SC7F9.04c;locus_tag=SCO6852
NC_003888.3	RefSeq	CDS	7624664	7625485	.	-	0	ID=cds6786;Parent=gene6914;Dbxref=Genbank:NP_630922.1,GeneID:1102291;Name=NP_630922.1;Note=SC7F9.04c%2C unknown%2C len: 273 aa. Similar to other hypothetical proteins predicted to be encoded by CDS located on this cosmid: SC7F9.02c (259 aa)%2C fasta scores opt: 442 z-score: 398.4 E(): 9.8e-17 33.7%25 identity in 255 aa overlap and SC7F9.06c (267 aa)%2C fasta scores opt: 76 z-score: 373.8 E(): 2.3e-15 30.5%25 identity in 272 aa overlap;gbkey=CDS;gene=SC7F9.04c;product=hypothetical protein;protein_id=NP_630922.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7625550	7625554	.	+	.	ID=id8963;gbkey=RBS
NC_003888.3	RefSeq	gene	7625557	7625841	.	+	.	ID=gene6915;Dbxref=GeneID:1102292;Name=SC7F9.05;gbkey=Gene;gene=SC7F9.05;gene_biotype=protein_coding;gene_synonym=SC7F9.05;locus_tag=SCO6853
NC_003888.3	RefSeq	CDS	7625557	7625841	.	+	0	ID=cds6787;Parent=gene6915;Dbxref=Genbank:NP_630923.1,GeneID:1102292;Name=NP_630923.1;Note=SC7F9.05%2C unknown%2C len: 94 aa.;gbkey=CDS;gene=SC7F9.05;product=hypothetical protein;protein_id=NP_630923.1;transl_table=11
NC_003888.3	RefSeq	gene	7625857	7626660	.	-	.	ID=gene6916;Dbxref=GeneID:1102293;Name=SC7F9.06c;gbkey=Gene;gene=SC7F9.06c;gene_biotype=protein_coding;gene_synonym=SC7F9.06c;locus_tag=SCO6854
NC_003888.3	RefSeq	CDS	7625857	7626660	.	-	0	ID=cds6788;Parent=gene6916;Dbxref=Genbank:NP_630924.1,GeneID:1102293;Name=NP_630924.1;Note=SC7F9.06c%2C unknown%2C len: 267 aa. Similar to other hypothetical proteins predicted to be encoded by CDS located on this cosmid: SC7F9.02c (259 aa)%2C fasta scores opt: 385 z-score: 396.2 E(): 1.3e-16 34.6%25 identity in 257 aa overlap and SC7F9.04c (273 aa)%2C fasta scores opt: 376 z-score: 386.8 E(): 4.3e-16 30.5%25 identity in 272 aa overlap.;gbkey=CDS;gene=SC7F9.06c;product=hypothetical protein;protein_id=NP_630924.1;transl_table=11
NC_003888.3	RefSeq	gene	7626657	7627040	.	-	.	ID=gene6917;Dbxref=GeneID:1102294;Name=SC7F9.07c;gbkey=Gene;gene=SC7F9.07c;gene_biotype=protein_coding;gene_synonym=SC7F9.07c;locus_tag=SCO6855
NC_003888.3	RefSeq	CDS	7626657	7627040	.	-	0	ID=cds6789;Parent=gene6917;Dbxref=Genbank:NP_630925.1,GeneID:1102294;Name=NP_630925.1;Note=SC7F9.07c%2C unknown%2C len: 127 aa. Weakly similar to SC7F9.08c hypothetical protein%2C also located on this cosmid (215 aa)%2C fasta scores opt:98 z-score: 114.2 E(): 0.66 28.9%25 identity in 121 aa overlap.;gbkey=CDS;gene=SC7F9.07c;product=hypothetical protein;protein_id=NP_630925.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7626666	7626670	.	-	.	ID=id8964;Dbxref=GeneID:1102294;gbkey=RBS;gene=SC7F9.07c
NC_003888.3	RefSeq	ribosome_entry_site	7627044	7627048	.	-	.	ID=id8965;gbkey=RBS
NC_003888.3	RefSeq	gene	7627477	7628124	.	-	.	ID=gene6918;Dbxref=GeneID:1102295;Name=SC7F9.08c;gbkey=Gene;gene=SC7F9.08c;gene_biotype=protein_coding;gene_synonym=SC7F9.08c;locus_tag=SCO6856
NC_003888.3	RefSeq	CDS	7627477	7628124	.	-	0	ID=cds6790;Parent=gene6918;Dbxref=Genbank:NP_630926.1,GeneID:1102295;Name=NP_630926.1;Note=SC7F9.08c%2C unknown%2C len: 215 aa. Weakly similar to Streptomyces coelicolor TR:Q9X899 (EMBL:AL049645) hypothetical 25.5 KD protein%2C SCE2.04 (241 aa)%2C fasta scores opt: 158 z-score: 178.7 E():0.015 28.0%25 identity in 150 aa overlap.;gbkey=CDS;gene=SC7F9.08c;product=hypothetical protein;protein_id=NP_630926.1;transl_table=11
NC_003888.3	RefSeq	gene	7628121	7628879	.	-	.	ID=gene6919;Dbxref=GeneID:1102296;Name=SC7F9.09c;gbkey=Gene;gene=SC7F9.09c;gene_biotype=protein_coding;gene_synonym=SC7F9.09c;locus_tag=SCO6857
NC_003888.3	RefSeq	CDS	7628121	7628879	.	-	0	ID=cds6791;Parent=gene6919;Dbxref=Genbank:NP_630927.1,GeneID:1102296;Name=NP_630927.1;Note=SC7F9.09c%2C unknown%2C len: 252 aa.;gbkey=CDS;gene=SC7F9.09c;product=hypothetical protein;protein_id=NP_630927.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7628129	7628132	.	-	.	ID=id8966;Dbxref=GeneID:1102296;gbkey=RBS;gene=SC7F9.09c
NC_003888.3	RefSeq	ribosome_entry_site	7628884	7628888	.	-	.	ID=id8967;gbkey=RBS
NC_003888.3	RefSeq	gene	7628905	7629609	.	-	.	ID=gene6920;Dbxref=GeneID:1102297;Name=SC7F9.10c;gbkey=Gene;gene=SC7F9.10c;gene_biotype=protein_coding;gene_synonym=SC7F9.10c;locus_tag=SCO6858
NC_003888.3	RefSeq	CDS	7628905	7629609	.	-	0	ID=cds6792;Parent=gene6920;Dbxref=Genbank:NP_630928.1,GeneID:1102297;Name=NP_630928.1;Note=SC7F9.10c%2C unknown%2C len: 215 aa. Weakly similar to Streptomyces coelicolor TR:Q9X899 (EMBL:AL049645) hypothetical 25.5 KD protein%2C SCE2.04 (241 aa)%2C fasta scores opt: 160 z-score: 176.7 E(): 0.02 28.3%25 identity in 205 aa overlap.;gbkey=CDS;gene=SC7F9.10c;product=hypothetical protein;protein_id=NP_630928.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7629620	7629624	.	-	.	ID=id8968;gbkey=RBS
NC_003888.3	RefSeq	gene	7629623	7630453	.	-	.	ID=gene6921;Dbxref=GeneID:1102298;Name=SC7F9.11c;gbkey=Gene;gene=SC7F9.11c;gene_biotype=protein_coding;gene_synonym=SC7F9.11c;locus_tag=SCO6859
NC_003888.3	RefSeq	CDS	7629623	7630453	.	-	0	ID=cds6793;Parent=gene6921;Dbxref=Genbank:NP_630929.1,GeneID:1102298;Name=NP_630929.1;Note=SC7F9.11c%2C unknown%2C len: 276 aa.;gbkey=CDS;gene=SC7F9.11c;product=hypothetical protein;protein_id=NP_630929.1;transl_table=11
NC_003888.3	RefSeq	gene	7630450	7630887	.	-	.	ID=gene6922;Dbxref=GeneID:1102299;Name=SC7F9.12c;gbkey=Gene;gene=SC7F9.12c;gene_biotype=protein_coding;gene_synonym=SC7F9.12c;locus_tag=SCO6860
NC_003888.3	RefSeq	CDS	7630450	7630887	.	-	0	ID=cds6794;Parent=gene6922;Dbxref=Genbank:NP_630930.1,GeneID:1102299;Name=NP_630930.1;Note=SC7F9.12c%2C unknown%2C len: 145 aa.;gbkey=CDS;gene=SC7F9.12c;product=hypothetical protein;protein_id=NP_630930.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7630460	7630463	.	-	.	ID=id8969;Dbxref=GeneID:1102299;gbkey=RBS;gene=SC7F9.12c
NC_003888.3	RefSeq	sequence_feature	7630807	7633067	.	-	.	ID=id8970;Note=previously sequenced and shares 100 %25 identity with S.coelicolor (EMBL:U19250) protein kinase-like protein (pk3) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7630893	7630897	.	-	.	ID=id8971;gbkey=RBS
NC_003888.3	RefSeq	gene	7631006	7632703	.	-	.	ID=gene6923;Dbxref=GeneID:1102300;Name=pk3;gbkey=Gene;gene=pk3;gene_biotype=protein_coding;gene_synonym=pk3,SC7F9.13c;locus_tag=SCO6861
NC_003888.3	RefSeq	CDS	7631006	7632703	.	-	0	ID=cds6795;Parent=gene6923;Dbxref=Genbank:NP_630931.1,GeneID:1102300;Name=NP_630931.1;Note=SC7F9.13c%2C pk3%2C protein kinase-like protein%2C 565 aa. Previously sequenced therefore identical to Streptomyces coelicolor TR:Q53839(EMBL:U19250). Contains Prosite hits to PS00107 Protein kinases ATP-binding region signature and PS00108 Ser/Thr protein kinases active-site signature. Also contains a Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain.;gbkey=CDS;gene=pk3;product=protein kinase-like protein;protein_id=NP_630931.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7631060	7631812	.	-	.	ID=id8972;Dbxref=GeneID:1102300;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 194.20%2C E-value 2.1e-54;gbkey=misc_feature;gene=pk3
NC_003888.3	RefSeq	sequence_feature	7631420	7631458	.	-	.	ID=id8973;Dbxref=GeneID:1102300;Note=PS00108 Ser/Thr protein kinases active-site signature.;gbkey=misc_feature;gene=pk3
NC_003888.3	RefSeq	sequence_feature	7631723	7631794	.	-	.	ID=id8974;Dbxref=GeneID:1102300;Note=PS00107 Protein kinases ATP-binding region signature.;gbkey=misc_feature;gene=pk3
NC_003888.3	RefSeq	gene	7632712	7633056	.	-	.	ID=gene6924;Dbxref=GeneID:1102301;Name=SC7F9.14c;gbkey=Gene;gene=SC7F9.14c;gene_biotype=protein_coding;gene_synonym=SC7F9.14c;locus_tag=SCO6862
NC_003888.3	RefSeq	CDS	7632712	7633056	.	-	0	ID=cds6796;Parent=gene6924;Dbxref=Genbank:NP_630932.1,GeneID:1102301;Name=NP_630932.1;Note=SC7F9.14c%2C unknown%2C len: 114 aa.;gbkey=CDS;gene=SC7F9.14c;product=hypothetical protein;protein_id=NP_630932.1;transl_table=11
NC_003888.3	RefSeq	gene	7633190	7633819	.	-	.	ID=gene6925;Dbxref=GeneID:1102302;Name=SC7F9.15c;gbkey=Gene;gene=SC7F9.15c;gene_biotype=protein_coding;gene_synonym=SC7F9.15c;locus_tag=SCO6863
NC_003888.3	RefSeq	CDS	7633190	7633819	.	-	0	ID=cds6797;Parent=gene6925;Dbxref=Genbank:NP_630933.1,GeneID:1102302;Name=NP_630933.1;Note=SC7F9.15c%2C unknown%2C len: 209 aa.;gbkey=CDS;gene=SC7F9.15c;product=hypothetical protein;protein_id=NP_630933.1;transl_table=11
NC_003888.3	RefSeq	gene	7633888	7635678	.	-	.	ID=gene6926;Dbxref=GeneID:1102303;Name=SC7F9.16c;gbkey=Gene;gene=SC7F9.16c;gene_biotype=protein_coding;gene_synonym=SC7F9.16c;locus_tag=SCO6864
NC_003888.3	RefSeq	CDS	7633888	7635678	.	-	0	ID=cds6798;Parent=gene6926;Dbxref=Genbank:NP_630934.1,GeneID:1102303;Name=NP_630934.1;Note=SC7F9.16c%2C unknown%2C len: 596 aa. Rich in the amino acid Ala.;gbkey=CDS;gene=SC7F9.16c;product=hypothetical protein;protein_id=NP_630934.1;transl_table=11
NC_003888.3	RefSeq	gene	7635675	7636883	.	-	.	ID=gene6927;Dbxref=GeneID:1102304;Name=SC7F9.17c;gbkey=Gene;gene=SC7F9.17c;gene_biotype=protein_coding;gene_synonym=SC7F9.17c;locus_tag=SCO6865
NC_003888.3	RefSeq	CDS	7635675	7636883	.	-	0	ID=cds6799;Parent=gene6927;Dbxref=Genbank:NP_630935.1,GeneID:1102304;Name=NP_630935.1;Note=SC7F9.17c%2C possible regulatory protein%2C len: 402 aa. Weakly similar to a number of transcriptional regulatory proteins e.g. Pseudomonas stutzeri SW:NIRQ_PSEST (EMBL:Z17423) denitrification regulatory protein%2C NirQ (275 aa)%2C fasta scores opt: 263 z-score: 268.0 E(): 1.6e-07 31.8%25 identity in 217 aa overlap. Contains a helix-turn-helix motif situated between residues 34..55 (+3.07 SD) and a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC7F9.17c;product=regulatory protein;protein_id=NP_630935.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7636395	7636418	.	-	.	ID=id8975;Dbxref=GeneID:1102304;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC7F9.17c
NC_003888.3	RefSeq	gene	7637267	7638457	.	-	.	ID=gene6928;Dbxref=GeneID:1102305;Name=SC7F9.18c;gbkey=Gene;gene=SC7F9.18c;gene_biotype=protein_coding;gene_synonym=SC7F9.18c;locus_tag=SCO6866
NC_003888.3	RefSeq	CDS	7637267	7638457	.	-	0	ID=cds6800;Parent=gene6928;Dbxref=Genbank:NP_630936.1,GeneID:1102305;Name=NP_630936.1;Note=SC7F9.18c%2C unknown%2C len: 396 aa. Weakly similar to Deinococcus radiodurans TR:AAF11162 (EMBL:AE002004) conserved hypothetical protein (470 aa)%2C fasta scores opt: 145 z-score: 156.5 E():0.26 25.1%25 identity in 407 aa overlap.;gbkey=CDS;gene=SC7F9.18c;product=hypothetical protein;protein_id=NP_630936.1;transl_table=11
NC_003888.3	RefSeq	gene	7638454	7638912	.	-	.	ID=gene6929;Dbxref=GeneID:1102306;Name=SC7F9.19c;gbkey=Gene;gene=SC7F9.19c;gene_biotype=protein_coding;gene_synonym=SC7F9.19c;locus_tag=SCO6867
NC_003888.3	RefSeq	CDS	7638454	7638912	.	-	0	ID=cds6801;Parent=gene6929;Dbxref=Genbank:NP_630937.1,GeneID:1102306;Name=NP_630937.1;Note=SC7F9.19c%2C unknown%2C len: 152 aa. Similar to the N-terminus of Streptomyces coelicolor TR:Q9X896 (EMBL:AL049645) hypothetical 26.6 KD protein%2C SCE2.01 (254 aa)%2C fasta scores opt: 203 z-score: 219.9 E(): 7.7e-05 42.0%25 identity in 81 aa overlap.;gbkey=CDS;gene=SC7F9.19c;product=hypothetical protein;protein_id=NP_630937.1;transl_table=11
NC_003888.3	RefSeq	gene	7638950	7640056	.	-	.	ID=gene6930;Dbxref=GeneID:1102307;Name=SC7F9.20c;gbkey=Gene;gene=SC7F9.20c;gene_biotype=protein_coding;gene_synonym=SC7F9.20c;locus_tag=SCO6868
NC_003888.3	RefSeq	CDS	7638950	7640056	.	-	0	ID=cds6802;Parent=gene6930;Dbxref=Genbank:NP_630938.1,GeneID:1102307;Name=NP_630938.1;Note=SC7F9.20c%2C unknown%2C len: 368 aa.;gbkey=CDS;gene=SC7F9.20c;product=hypothetical protein;protein_id=NP_630938.1;transl_table=11
NC_003888.3	RefSeq	gene	7640049	7640792	.	-	.	ID=gene6931;Dbxref=GeneID:1102308;Name=SC7F9.21c;gbkey=Gene;gene=SC7F9.21c;gene_biotype=protein_coding;gene_synonym=SC7F9.21c;locus_tag=SCO6869
NC_003888.3	RefSeq	CDS	7640049	7640792	.	-	0	ID=cds6803;Parent=gene6931;Dbxref=Genbank:NP_630939.1,GeneID:1102308;Name=NP_630939.1;Note=SC7F9.21c%2C unknown%2C len: 247 aa.;gbkey=CDS;gene=SC7F9.21c;product=hypothetical protein;protein_id=NP_630939.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7640065	7640068	.	-	.	ID=id8976;Dbxref=GeneID:1102308;gbkey=RBS;gene=SC7F9.21c
NC_003888.3	RefSeq	gene	7640844	7641461	.	-	.	ID=gene6932;Dbxref=GeneID:1102309;Name=SC7F9.22c;gbkey=Gene;gene=SC7F9.22c;gene_biotype=protein_coding;gene_synonym=SC7F9.22c;locus_tag=SCO6870
NC_003888.3	RefSeq	CDS	7640844	7641461	.	-	0	ID=cds6804;Parent=gene6932;Dbxref=Genbank:NP_630940.1,GeneID:1102309;Name=NP_630940.1;Note=SC7F9.22c%2C unknown%2C len: 205 aa.;gbkey=CDS;gene=SC7F9.22c;product=hypothetical protein;protein_id=NP_630940.1;transl_table=11
NC_003888.3	RefSeq	gene	7641501	7642568	.	-	.	ID=gene6933;Dbxref=GeneID:1102310;Name=SC7F9.23c;gbkey=Gene;gene=SC7F9.23c;gene_biotype=protein_coding;gene_synonym=SC7F9.23c;locus_tag=SCO6871
NC_003888.3	RefSeq	CDS	7641501	7642568	.	-	0	ID=cds6805;Parent=gene6933;Dbxref=Genbank:NP_630941.1,GeneID:1102310;Name=NP_630941.1;Note=SC7F9.23c%2C possible lipoprotein%2C len: 355 aa. Weakly similar to Streptomyces coelicolor TR:CAB61724(EMBL:AL133220) hypothetical 31.7 KD protein%2C SCC75A.24 (295 aa)%2C fasta scores opt: 316 z-score: 356.8 E(): 1.8e-12 27.3%25 identity in 297 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC7F9.23c;product=lipoprotein;protein_id=NP_630941.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7642485	7642517	.	-	.	ID=id8977;Dbxref=GeneID:1102310;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SC7F9.23c
NC_003888.3	RefSeq	gene	7642591	7643502	.	-	.	ID=gene6934;Dbxref=GeneID:1102311;Name=SC7F9.24c;gbkey=Gene;gene=SC7F9.24c;gene_biotype=protein_coding;gene_synonym=SC7F9.24c;locus_tag=SCO6872
NC_003888.3	RefSeq	CDS	7642591	7643502	.	-	0	ID=cds6806;Parent=gene6934;Dbxref=Genbank:NP_630942.1,GeneID:1102311;Name=NP_630942.1;Note=SC7F9.24c%2C unknown%2C len: 303 aa. Similar in parts to Streptomyces coelicolor TR:Q9X875(EMBL:AL049661) hypothetical 21.6 KD protein%2C SCE134.20 (203 aa)%2C fasta scores opt: 358 z-score: 349.8 E(): 4.5e-12 43.8%25 identity in 146 aa overlap.;gbkey=CDS;gene=SC7F9.24c;product=hypothetical protein;protein_id=NP_630942.1;transl_table=11
NC_003888.3	RefSeq	gene	7643492	7643734	.	-	.	ID=gene6935;Dbxref=GeneID:1102312;Name=SC7F9.25c;gbkey=Gene;gene=SC7F9.25c;gene_biotype=protein_coding;gene_synonym=SC7F9.25c;locus_tag=SCO6873
NC_003888.3	RefSeq	CDS	7643492	7643734	.	-	0	ID=cds6807;Parent=gene6935;Dbxref=Genbank:NP_630943.1,GeneID:1102312;Name=NP_630943.1;Note=SC7F9.25c%2C unknown%2C len: 80 aa.;gbkey=CDS;gene=SC7F9.25c;product=hypothetical protein;protein_id=NP_630943.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7643507	7643512	.	-	.	ID=id8978;Dbxref=GeneID:1102312;gbkey=RBS;gene=SC7F9.25c
NC_003888.3	RefSeq	gene	7643807	7644442	.	-	.	ID=gene6936;Dbxref=GeneID:1102313;Name=SC7F9.26c;gbkey=Gene;gene=SC7F9.26c;gene_biotype=protein_coding;gene_synonym=SC7F9.26c;locus_tag=SCO6874
NC_003888.3	RefSeq	CDS	7643807	7644442	.	-	0	ID=cds6808;Parent=gene6936;Dbxref=Genbank:NP_630944.1,GeneID:1102313;Name=NP_630944.1;Note=SC7F9.26c%2C unknown%2C len: 211 aa.;gbkey=CDS;gene=SC7F9.26c;product=hypothetical protein;protein_id=NP_630944.1;transl_table=11
NC_003888.3	RefSeq	gene	7644396	7644821	.	-	.	ID=gene6937;Dbxref=GeneID:1102314;Name=SC7F9.27c;gbkey=Gene;gene=SC7F9.27c;gene_biotype=protein_coding;gene_synonym=SC7F9.27c;locus_tag=SCO6875
NC_003888.3	RefSeq	CDS	7644396	7644821	.	-	0	ID=cds6809;Parent=gene6937;Dbxref=Genbank:NP_630945.1,GeneID:1102314;Name=NP_630945.1;Note=SC7F9.27c%2C unknown%2C len: 141 aa.;gbkey=CDS;gene=SC7F9.27c;product=hypothetical protein;protein_id=NP_630945.1;transl_table=11
NC_003888.3	RefSeq	gene	7644900	7645406	.	-	.	ID=gene6938;Dbxref=GeneID:1102315;Name=SC7F9.28c;gbkey=Gene;gene=SC7F9.28c;gene_biotype=protein_coding;gene_synonym=SC7F9.28c;locus_tag=SCO6876
NC_003888.3	RefSeq	CDS	7644900	7645406	.	-	0	ID=cds6810;Parent=gene6938;Dbxref=Genbank:NP_630946.1,GeneID:1102315;Name=NP_630946.1;Note=SC7F9.28c%2C unknown%2C len: 168 aa.;gbkey=CDS;gene=SC7F9.28c;product=hypothetical protein;protein_id=NP_630946.1;transl_table=11
NC_003888.3	RefSeq	gene	7645403	7646185	.	-	.	ID=gene6939;Dbxref=GeneID:1102316;Name=SC7F9.29c;gbkey=Gene;gene=SC7F9.29c;gene_biotype=protein_coding;gene_synonym=SC7F9.29c;locus_tag=SCO6877
NC_003888.3	RefSeq	CDS	7645403	7646185	.	-	0	ID=cds6811;Parent=gene6939;Dbxref=Genbank:NP_630947.1,GeneID:1102316;Name=NP_630947.1;Note=SC7F9.29c%2C unknown%2C len: 260 aa.;gbkey=CDS;gene=SC7F9.29c;product=hypothetical protein;protein_id=NP_630947.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7645418	7645423	.	-	.	ID=id8979;Dbxref=GeneID:1102316;gbkey=RBS;gene=SC7F9.29c
NC_003888.3	RefSeq	gene	7646264	7647787	.	-	.	ID=gene6940;Dbxref=GeneID:1102317;Name=SC7F9.30c;gbkey=Gene;gene=SC7F9.30c;gene_biotype=protein_coding;gene_synonym=SC7F9.30c;locus_tag=SCO6878
NC_003888.3	RefSeq	CDS	7646264	7647787	.	-	0	ID=cds6812;Parent=gene6940;Dbxref=Genbank:NP_630948.1,GeneID:1102317;Name=NP_630948.1;Note=SC7F9.30c%2C possible ATP-binding protein%2C len: 507 aa. Highly similar to Streptomyces coelicolor TR:Q9X873(EMBL:AL049661)  ATP-binding protein%2C SCE134.18 (489 aa)%2C fasta scores opt: 2405 z-score: 2548.3 E(): 0 73.5%25 identity in 490 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC7F9.30c;product=ATP-binding protein;protein_id=NP_630948.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7647323	7647346	.	-	.	ID=id8980;Dbxref=GeneID:1102317;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7F9.30c
NC_003888.3	RefSeq	gene	7647816	7648277	.	-	.	ID=gene6941;Dbxref=GeneID:1102318;Name=SC7F9.31c;gbkey=Gene;gene=SC7F9.31c;gene_biotype=protein_coding;gene_synonym=SC7F9.31c;locus_tag=SCO6879
NC_003888.3	RefSeq	CDS	7647816	7648277	.	-	0	ID=cds6813;Parent=gene6941;Dbxref=Genbank:NP_630949.1,GeneID:1102318;Name=NP_630949.1;Note=SC7F9.31c%2C hypothetical protein%2C len: 153 aa. Similar to Streptomyces coelicolor TR:Q9X872(EMBL:AL049661) hypothetical 16.3 KD protein%2C SCE134.17 (150 aa)%2C fasta scores opt:309 z-score: 375.4 E(): 1.7e-13 38.6%25 identity in 153 aa overlap.;gbkey=CDS;gene=SC7F9.31c;product=hypothetical protein;protein_id=NP_630949.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7648287	7648291	.	-	.	ID=id8981;gbkey=RBS
NC_003888.3	RefSeq	gene	7648378	7649820	.	-	.	ID=gene6942;Dbxref=GeneID:1102319;Name=SC7F9.32c;gbkey=Gene;gene=SC7F9.32c;gene_biotype=protein_coding;gene_synonym=SC7F9.32c;locus_tag=SCO6880
NC_003888.3	RefSeq	CDS	7648378	7649820	.	-	0	ID=cds6814;Parent=gene6942;Dbxref=Genbank:NP_630950.1,GeneID:1102319;Name=NP_630950.1;Note=SC7F9.32c%2C possible lipoprotein%2C len: 480 aa. Highly similar to Streptomyces coelicolor TR:Q9X871(EMBL:AL049661) integral membrane protein%2C SCE134.16 (488 aa)%2C fasta scores opt: 2046 z-score: 2266.5 E(): 0 63.3%25 identity in 479 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC7F9.32c;product=lipoprotein;protein_id=NP_630950.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7649746	7649778	.	-	.	ID=id8982;Dbxref=GeneID:1102319;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC7F9.32c
NC_003888.3	RefSeq	gene	7649943	7651331	.	-	.	ID=gene6943;Dbxref=GeneID:1102320;Name=SC7F9.33c;gbkey=Gene;gene=SC7F9.33c;gene_biotype=protein_coding;gene_synonym=SC7F9.33c;locus_tag=SCO6881
NC_003888.3	RefSeq	CDS	7649943	7651331	.	-	0	ID=cds6815;Parent=gene6943;Dbxref=Genbank:NP_630951.1,GeneID:1102320;Name=NP_630951.1;Note=SC7F9.33c%2C possible ATP-binding protein%2C len: 462 aa. Highly similar to Streptomyces coelicolor TR:Q9X870(EMBL:AL049661)  ATP-binding protein%2C SCE134.15 (469 aa)%2C fasta scores opt: 1469 z-score: 1094.9 E():0 52.2%25 identity in 490 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC7F9.33c;product=ATP-binding protein;protein_id=NP_630951.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7650594	7650617	.	-	.	ID=id8983;Dbxref=GeneID:1102320;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC7F9.33c
NC_003888.3	RefSeq	gene	7651368	7652060	.	-	.	ID=gene6944;Dbxref=GeneID:1102321;Name=SC7F9.34c;gbkey=Gene;gene=SC7F9.34c;gene_biotype=protein_coding;gene_synonym=SC7F9.34c;locus_tag=SCO6882
NC_003888.3	RefSeq	CDS	7651368	7652060	.	-	0	ID=cds6816;Parent=gene6944;Dbxref=Genbank:NP_630952.1,GeneID:1102321;Name=NP_630952.1;Note=SC7F9.34c%2C possible membrane protein%2C len: 230 aa. Highly similar to Streptomyces coelicolor TR:Q9X869(EMBL:AL049661) hypothetical protein%2C SCE134.14 (226 aa)%2C fasta scores opt: 694 z-score: 716.2 E(): 1.8e-32 51.1%25 identity in 223 aa overlap. Contains a possible membrane spanning hydrophobic domain in the N-terminus.;gbkey=CDS;gene=SC7F9.34c;product=hypothetical protein;protein_id=NP_630952.1;transl_table=11
NC_003888.3	RefSeq	gene	7652060	7652374	.	-	.	ID=gene6945;Dbxref=GeneID:1102322;Name=SC7F9.35c;gbkey=Gene;gene=SC7F9.35c;gene_biotype=protein_coding;gene_synonym=SC7F9.35c;locus_tag=SCO6883
NC_003888.3	RefSeq	CDS	7652060	7652374	.	-	0	ID=cds6817;Parent=gene6945;Dbxref=Genbank:NP_630953.1,GeneID:1102322;Name=NP_630953.1;Note=SC7F9.35c%2C possible membrane protein%2C len: 104 aa. Highly similar to Streptomyces coelicolor TR:Q9X868 (EMBL:AL049661) hypothetical 10.3 KD protein%2C SCE134.13 (102 aa)%2C fasta scores: opt: 543 z-score: 619.4 E(): 4.4e-27 80.0%25 identity in 100 aa overlap. Contains possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SC7F9.35c;product=hypothetical protein;protein_id=NP_630953.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7652388	7652393	.	-	.	ID=id8984;gbkey=RBS
NC_003888.3	RefSeq	gene	7652497	7653630	.	-	.	ID=gene6946;Dbxref=GeneID:1102323;Name=SC7F9.36c;gbkey=Gene;gene=SC7F9.36c;gene_biotype=protein_coding;gene_synonym=SC7F9.36c;locus_tag=SCO6884
NC_003888.3	RefSeq	CDS	7652497	7653630	.	-	0	ID=cds6818;Parent=gene6946;Dbxref=Genbank:NP_630954.1,GeneID:1102323;Name=NP_630954.1;Note=SC7F9.36c%2C possible hypothetical protein%2C len: 377 aa. Highly similar to Streptomyces coelicolor TR:Q9X867(EMBL:AL049661)  lipoprotein%2C SCE134.12 (381 aa)%2C fasta scores opt: 1374 z-score: 1462.4 E():0 56.0%25 identity in 384 aa overlap. Contains a Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family and a possible N-terminal signal sequence.;gbkey=CDS;gene=SC7F9.36c;product=hypothetical protein;protein_id=NP_630954.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7652503	7652850	.	-	.	ID=id8985;Dbxref=GeneID:1102323;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 92.70%2C E-value 7.3e-24;gbkey=misc_feature;gene=SC7F9.36c
NC_003888.3	RefSeq	gene	7654146	7654901	.	+	.	ID=gene6947;Dbxref=GeneID:1102324;Name=SC7F9.37;gbkey=Gene;gene=SC7F9.37;gene_biotype=protein_coding;gene_synonym=SC7F9.37;locus_tag=SCO6885
NC_003888.3	RefSeq	CDS	7654146	7654901	.	+	0	ID=cds6819;Parent=gene6947;Dbxref=Genbank:NP_630955.1,GeneID:1102324;Name=NP_630955.1;Note=SC7F9.37%2C possible DNA methylase%2C len: 251 aa. Similar to many methylases e.g. Moraxella bovis SW:MT1C_MORBO(EMBL:D13968) modification methylase MboI (EC 2.1.1.72) (273 aa)%2C fasta scores opt:208 z-score: 250.5 E(): 1.5e-06 24.5%25 identity in 253 aa overlap and Streptomyces coelicolor TR:Q9X866(EMBL:AL049661) DNA methylase%2C SCE134.11c (248 aa)%2C fasta scores opt: 976 z-score: 1145.8 E():0 57.6%25 identity in 250 aa overlap. Contains a Prosite hit to PS00092 N-6 Adenine-specific DNA methylases signature and a Pfam match to entry PF01555 N6_N4_Mtase%2C DNA methylase.;gbkey=CDS;gene=SC7F9.37;product=DNA methylase;protein_id=NP_630955.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7654218	7654238	.	+	.	ID=id8986;Dbxref=GeneID:1102324;Note=PS00092 N-6 Adenine-specific DNA methylases signature;gbkey=misc_feature;gene=SC7F9.37
NC_003888.3	RefSeq	gene	7655068	7655703	.	+	.	ID=gene6948;Dbxref=GeneID:1102325;Name=SC7F9.38;gbkey=Gene;gene=SC7F9.38;gene_biotype=protein_coding;gene_synonym=SC7F9.38;locus_tag=SCO6886
NC_003888.3	RefSeq	CDS	7655068	7655703	.	+	0	ID=cds6820;Parent=gene6948;Dbxref=Genbank:NP_630956.1,GeneID:1102325;Name=NP_630956.1;Note=SC7F9.38%2C unknown%2C len: 211 aa. Highly similar to Streptomyces coelicolor TR:Q9X8A6 (EMBL:AL049645) hypothetical 21.3 KD protein%2C SCE2.11 (199 aa)%2C fasta scores opt: 562 z-score: 585.7 E(): 3.3e-25 44.4%25 identity in 189 aa overlap;gbkey=CDS;gene=SC7F9.38;product=hypothetical protein;protein_id=NP_630956.1;transl_table=11
NC_003888.3	RefSeq	gene	7655700	7656185	.	+	.	ID=gene6949;Dbxref=GeneID:1102326;Name=SC7F9.39;gbkey=Gene;gene=SC7F9.39;gene_biotype=protein_coding;gene_synonym=SC7F9.39;locus_tag=SCO6887
NC_003888.3	RefSeq	CDS	7655700	7656185	.	+	0	ID=cds6821;Parent=gene6949;Dbxref=Genbank:NP_630957.1,GeneID:1102326;Name=NP_630957.1;Note=SC7F9.39%2C hypothetical protein%2C len: 161 aa. Highly similar to Streptomyces coelicolor TR:Q9X8A8 (EMBL:AL049645) hypothetical 17.2 KD protein%2C SCE2.13 (158 aa)%2C fasta scores opt: 252 z-score: 254.1 E(): 9.7e-07 40.0%25 identity in 145 aa overlap.;gbkey=CDS;gene=SC7F9.39;product=hypothetical protein;protein_id=NP_630957.1;transl_table=11
NC_003888.3	RefSeq	gene	7656204	7656902	.	+	.	ID=gene6950;Dbxref=GeneID:1102327;Name=SC7F9.40;gbkey=Gene;gene=SC7F9.40;gene_biotype=protein_coding;gene_synonym=SC7F9.40;locus_tag=SCO6888
NC_003888.3	RefSeq	CDS	7656204	7656902	.	+	0	ID=cds6822;Parent=gene6950;Dbxref=Genbank:NP_630958.1,GeneID:1102327;Name=NP_630958.1;Note=SC7F9.40%2C unknown%2C len: 232 aa.;gbkey=CDS;gene=SC7F9.40;product=hypothetical protein;protein_id=NP_630958.1;transl_table=11
NC_003888.3	RefSeq	gene	7656920	7657660	.	+	.	ID=gene6951;Dbxref=GeneID:1102328;Name=SC7F9.41;gbkey=Gene;gene=SC7F9.41;gene_biotype=protein_coding;gene_synonym=SC7F9.41;locus_tag=SCO6889
NC_003888.3	RefSeq	CDS	7656920	7657660	.	+	0	ID=cds6823;Parent=gene6951;Dbxref=Genbank:NP_630959.1,GeneID:1102328;Name=NP_630959.1;Note=SC7F9.41%2C unknown%2C len: 246 aa. Similar to Streptomyces coelicolor TR:Q9X8A7 (EMBL:AL049645) hypothetical 28.5 KD protein%2C SCE2.12 (259 aa)%2C fasta scores opt: 405 z-score: 450.6 E(): 1.1e-17 35.6%25 identity in 233 aa overlap.;gbkey=CDS;gene=SC7F9.41;product=hypothetical protein;protein_id=NP_630959.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7657794	7657799	.	+	.	ID=id8987;gbkey=RBS
NC_003888.3	RefSeq	gene	7657809	7658258	.	+	.	ID=gene6952;Dbxref=GeneID:1102329;Name=SC7F9.42;gbkey=Gene;gene=SC7F9.42;gene_biotype=protein_coding;gene_synonym=SC7F9.42;locus_tag=SCO6890
NC_003888.3	RefSeq	CDS	7657809	7658258	.	+	0	ID=cds6824;Parent=gene6952;Dbxref=Genbank:NP_630960.1,GeneID:1102329;Name=NP_630960.1;Note=SC7F9.42%2C possible hypothetical protein%2C len: 149 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC7F9.42;product=hypothetical protein;protein_id=NP_630960.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7658239	7658243	.	+	.	ID=id8988;Dbxref=GeneID:1102329;gbkey=RBS;gene=SC7F9.42
NC_003888.3	RefSeq	gene	7658251	7658733	.	+	.	ID=gene6953;Dbxref=GeneID:1102330;Name=SC7F9.43;gbkey=Gene;gene=SC7F9.43;gene_biotype=protein_coding;gene_synonym=SC7F9.43;locus_tag=SCO6891
NC_003888.3	RefSeq	CDS	7658251	7658733	.	+	0	ID=cds6825;Parent=gene6953;Dbxref=Genbank:NP_630961.1,GeneID:1102330;Name=NP_630961.1;Note=SC7F9.43%2C unknown%2C len: 160 aa;gbkey=CDS;gene=SC7F9.43;product=hypothetical protein;protein_id=NP_630961.1;transl_table=11
NC_003888.3	RefSeq	gene	7658730	7659212	.	+	.	ID=gene6954;Dbxref=GeneID:1102331;Name=SC7F9.44;gbkey=Gene;gene=SC7F9.44;gene_biotype=protein_coding;gene_synonym=SC7F9.44;locus_tag=SCO6892
NC_003888.3	RefSeq	CDS	7658730	7659212	.	+	0	ID=cds6826;Parent=gene6954;Dbxref=Genbank:NP_630962.1,GeneID:1102331;Name=NP_630962.1;Note=SC7F9.44%2C unknown%2C len: 160 aa.;gbkey=CDS;gene=SC7F9.44;product=hypothetical protein;protein_id=NP_630962.1;transl_table=11
NC_003888.3	RefSeq	gene	7659287	7659598	.	+	.	ID=gene6955;Dbxref=GeneID:1102332;Name=SC7F9.45;gbkey=Gene;gene=SC7F9.45;gene_biotype=protein_coding;gene_synonym=SC7F9.45;locus_tag=SCO6893
NC_003888.3	RefSeq	CDS	7659287	7659598	.	+	0	ID=cds6827;Parent=gene6955;Dbxref=Genbank:NP_630963.1,GeneID:1102332;Name=NP_630963.1;Note=SC7F9.45%2C unknown%2C len: 103 aa.;gbkey=CDS;gene=SC7F9.45;product=hypothetical protein;protein_id=NP_630963.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7659626	7659630	.	+	.	ID=id8989;gbkey=RBS
NC_003888.3	RefSeq	gene	7659639	7660481	.	+	.	ID=gene6956;Dbxref=GeneID:1102333;Name=SC7F9.46;gbkey=Gene;gene=SC7F9.46;gene_biotype=protein_coding;gene_synonym=SC7F9.46;locus_tag=SCO6894
NC_003888.3	RefSeq	CDS	7659639	7660481	.	+	0	ID=cds6828;Parent=gene6956;Dbxref=Genbank:NP_630964.1,GeneID:1102333;Name=NP_630964.1;Note=SC7F9.46%2C unknown%2C len: 280 aa. Contains a Pfam match to entry PF01638 DUF24%2C Protein of unknown function.;gbkey=CDS;gene=SC7F9.46;product=hypothetical protein;protein_id=NP_630964.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7659705	7659971	.	+	.	ID=id8990;Dbxref=GeneID:1102333;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function%2C score 5.60%2C E-value 2.6e-05;gbkey=misc_feature;gene=SC7F9.46
NC_003888.3	RefSeq	ribosome_entry_site	7660464	7660468	.	+	.	ID=id8991;Dbxref=GeneID:1102333;gbkey=RBS;gene=SC7F9.46
NC_003888.3	RefSeq	gene	7660478	7660993	.	+	.	ID=gene6957;Dbxref=GeneID:1102334;Name=SC1B2.01;gbkey=Gene;gene=SC1B2.01;gene_biotype=protein_coding;gene_synonym=SC1B2.01,SC7F9.47;locus_tag=SCO6895
NC_003888.3	RefSeq	CDS	7660478	7660993	.	+	0	ID=cds6829;Parent=gene6957;Dbxref=Genbank:NP_733717.1,GeneID:1102334;Name=NP_733717.1;Note=SC1B2.01%2C possible regulator%2C partial CDS%2C len: > 51 aa. Overlaps and extends into CDS SC7F9.47 on the adjoining cosmid which is weakly similar to Streptomyces pilosus TR:Q54804(EMBL:Z50048) iron repressor%2C DesR.~SC7F9.47%2C possible regulator%2C partial CDS%2C len: >153 aa. Weakly similar to Streptomyces pilosus TR:Q54804(EMBL:Z50048) iron repressor%2C DesR (231 aa)%2C fasta scores opt: 113 z-score: 145.9 E(): 1 29.4%25 identity in 143 aa overlap.;gbkey=CDS;gene=SC1B2.01;product=regulator (fragment);protein_id=NP_733717.1;transl_table=11
NC_003888.3	RefSeq	gene	7660990	7662225	.	+	.	ID=gene6958;Dbxref=GeneID:1102335;Name=SC1B2.02;gbkey=Gene;gene=SC1B2.02;gene_biotype=protein_coding;gene_synonym=SC1B2.02;locus_tag=SCO6896
NC_003888.3	RefSeq	CDS	7660990	7662225	.	+	0	ID=cds6830;Parent=gene6958;Dbxref=Genbank:NP_630965.1,GeneID:1102335;Name=NP_630965.1;Note=SC1B2.02%2C possible integral membrane protein%2C len: 411 aa. Weakly similar to several e.g. Escherichia coli TR:Q47390(EMBL:D16251) erythromycin resistance determinant%2C MrX (388 aa)%2C fasta scores opt: 263 z-score: 283.2 E(): 2.6e-08 26.5%25 identity in 389 aa overlap. Contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SC1B2.02;product=hypothetical protein;protein_id=NP_630965.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7662246	7662251	.	+	.	ID=id8992;gbkey=RBS
NC_003888.3	RefSeq	gene	7662258	7662569	.	+	.	ID=gene6959;Dbxref=GeneID:1102336;Name=SC1B2.03;gbkey=Gene;gene=SC1B2.03;gene_biotype=protein_coding;gene_synonym=SC1B2.03;locus_tag=SCO6897
NC_003888.3	RefSeq	CDS	7662258	7662569	.	+	0	ID=cds6831;Parent=gene6959;Dbxref=Genbank:NP_630966.1,GeneID:1102336;Name=NP_630966.1;Note=SC1B2.03%2C unknown%2C len: 103 aa.;gbkey=CDS;gene=SC1B2.03;product=hypothetical protein;protein_id=NP_630966.1;transl_table=11
NC_003888.3	RefSeq	gene	7662638	7663855	.	+	.	ID=gene6960;Dbxref=GeneID:1102337;Name=SC1B2.04;gbkey=Gene;gene=SC1B2.04;gene_biotype=protein_coding;gene_synonym=SC1B2.04;locus_tag=SCO6898
NC_003888.3	RefSeq	CDS	7662638	7663855	.	+	0	ID=cds6832;Parent=gene6960;Dbxref=Genbank:NP_630967.1,GeneID:1102337;Name=NP_630967.1;Note=SC1B2.04%2C possible carboxylase%2C len: 405 aa. Weakly similar to several e.g. Anabaena sp. (strain PCC 7120) SW:ACCC_ANASP(EMBL:L14862) biotin carboxylase (EC 6.3.4.14) (447 aa)%2C fasta scores opt: 226 z-score: 262.2 E(): 3.8e-07 28.5%25 identity in 214 aa overlap. Contains a Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase) and a Prosite hit to PS00867 Carbamoyl-phosphate synthase subdomain signature 2.;gbkey=CDS;gene=SC1B2.04;product=carboxylase;protein_id=NP_630967.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7662947	7663213	.	+	.	ID=id8993;Dbxref=GeneID:1102337;Note=Pfam match to entry PF00289 CPSase_L_chain%2C Carbamoyl-phosphate synthase (CPSase)%2C score 34.40%2C E-value 6.2e-09;gbkey=misc_feature;gene=SC1B2.04
NC_003888.3	RefSeq	sequence_feature	7663442	7663465	.	+	.	ID=id8994;Dbxref=GeneID:1102337;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2;gbkey=misc_feature;gene=SC1B2.04
NC_003888.3	RefSeq	gene	7663852	7665003	.	+	.	ID=gene6961;Dbxref=GeneID:1102338;Name=SC1B2.05;gbkey=Gene;gene=SC1B2.05;gene_biotype=protein_coding;gene_synonym=SC1B2.05;locus_tag=SCO6899
NC_003888.3	RefSeq	CDS	7663852	7665003	.	+	0	ID=cds6833;Parent=gene6961;Dbxref=Genbank:NP_630968.1,GeneID:1102338;Name=NP_630968.1;Note=SC1B2.05%2C possible membrane protein%2C len: 383 aa. Similar to several membrane transport proteins e.g. Rhizobium sp. (strain NGR234) SW:Y4WD_RHISN(EMBL:AE000103) hypothetical transport protein (377 aa)%2C fasta scores opt: 586 z-score: 584.6 E(): 4.2e-25 32.9%25 identity in 380 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1B2.05;product=hypothetical protein;protein_id=NP_630968.1;transl_table=11
NC_003888.3	RefSeq	gene	7665000	7665629	.	+	.	ID=gene6962;Dbxref=GeneID:1102339;Name=SC1B2.06;gbkey=Gene;gene=SC1B2.06;gene_biotype=protein_coding;gene_synonym=SC1B2.06;locus_tag=SCO6900
NC_003888.3	RefSeq	CDS	7665000	7665629	.	+	0	ID=cds6834;Parent=gene6962;Dbxref=Genbank:NP_630969.1,GeneID:1102339;Name=NP_630969.1;Note=SC1B2.06%2C unknown%2C len: 209 aa. Similar to Escherichia coli SW:YIHX_ECOLI (EMBL:L19201) hypothetical 22.7 kd protein (199 aa)%2C fasta scores opt: 181 z-score: 234.7 E(): 1.3e-05 28.0%25 identity in 189 aa overlap.;gbkey=CDS;gene=SC1B2.06;product=hypothetical protein;protein_id=NP_630969.1;transl_table=11
NC_003888.3	RefSeq	gene	7665653	7666519	.	+	.	ID=gene6963;Dbxref=GeneID:1102340;Name=SC1B2.07;gbkey=Gene;gene=SC1B2.07;gene_biotype=protein_coding;gene_synonym=SC1B2.07;locus_tag=SCO6901
NC_003888.3	RefSeq	CDS	7665653	7666519	.	+	0	ID=cds6835;Parent=gene6963;Dbxref=Genbank:NP_630970.1,GeneID:1102340;Name=NP_630970.1;Note=SC1B2.07%2C unknown%2C len: 288 aa. Similar to Streptomyces coelicolor TR:CAB72355(EMBL:AL138977) hypothetical 27.8 kd protein%2C SC7F9.02C (259 aa)%2C fasta scores opt: 229 z-score: 247.8 E(): 2.4e-06 31.4%25 identity in 283 aa overlap.;gbkey=CDS;gene=SC1B2.07;product=hypothetical protein;protein_id=NP_630970.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7666538	7666541	.	+	.	ID=id8995;gbkey=RBS
NC_003888.3	RefSeq	gene	7666548	7667036	.	+	.	ID=gene6964;Dbxref=GeneID:1102341;Name=SC1B2.08;gbkey=Gene;gene=SC1B2.08;gene_biotype=protein_coding;gene_synonym=SC1B2.08;locus_tag=SCO6902
NC_003888.3	RefSeq	CDS	7666548	7667036	.	+	0	ID=cds6836;Parent=gene6964;Dbxref=Genbank:NP_630971.1,GeneID:1102341;Name=NP_630971.1;Note=SC1B2.08%2C unknown%2C len: 162 aa.;gbkey=CDS;gene=SC1B2.08;product=hypothetical protein;protein_id=NP_630971.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7667070	7667074	.	+	.	ID=id8996;gbkey=RBS
NC_003888.3	RefSeq	gene	7667084	7667884	.	+	.	ID=gene6965;Dbxref=GeneID:1102342;Name=SC1B2.09;gbkey=Gene;gene=SC1B2.09;gene_biotype=protein_coding;gene_synonym=SC1B2.09;locus_tag=SCO6903
NC_003888.3	RefSeq	CDS	7667084	7667884	.	+	0	ID=cds6837;Parent=gene6965;Dbxref=Genbank:NP_630972.1,GeneID:1102342;Name=NP_630972.1;Note=SC1B2.09%2C unknown%2C len: 266 aa. Weakly similar to Streptomyces coelicolor TR:CAB72355(EMBL:AL138977) hypothetical 27.8 kd protein%2C SC7F9.02C (259 aa)%2C fasta scores opt: 149 z-score: 163.3 E(): 0.12 30.0%25 identity in 283 aa overlap.;gbkey=CDS;gene=SC1B2.09;product=hypothetical protein;protein_id=NP_630972.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7667901	7667906	.	+	.	ID=id8997;gbkey=RBS
NC_003888.3	RefSeq	gene	7667918	7668928	.	+	.	ID=gene6966;Dbxref=GeneID:1102343;Name=SC1B2.10;gbkey=Gene;gene=SC1B2.10;gene_biotype=protein_coding;gene_synonym=SC1B2.10;locus_tag=SCO6904
NC_003888.3	RefSeq	CDS	7667918	7668928	.	+	0	ID=cds6838;Parent=gene6966;Dbxref=Genbank:NP_630973.1,GeneID:1102343;Name=NP_630973.1;Note=SC1B2.10%2C possible membrane protein%2C len: 336 aa.Contains a possible membrane spanning hydrophobic domain. Rich in the amino acid Threonine;gbkey=CDS;gene=SC1B2.10;product=hypothetical protein;protein_id=NP_630973.1;transl_table=11
NC_003888.3	RefSeq	gene	7669027	7669404	.	+	.	ID=gene6967;Dbxref=GeneID:1102344;Name=SC1B2.11;gbkey=Gene;gene=SC1B2.11;gene_biotype=protein_coding;gene_synonym=SC1B2.11;locus_tag=SCO6905
NC_003888.3	RefSeq	CDS	7669027	7669404	.	+	0	ID=cds6839;Parent=gene6967;Dbxref=Genbank:NP_630974.1,GeneID:1102344;Name=NP_630974.1;Note=SC1B2.11%2C unknown%2C len: 125 aa.;gbkey=CDS;gene=SC1B2.11;product=hypothetical protein;protein_id=NP_630974.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7669443	7676822	.	+	.	ID=id8998;Note=low G+C region (62.79 %25).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7669618	7671207	.	-	.	ID=gene6968;Dbxref=GeneID:1102345;Name=SC1B2.12c;gbkey=Gene;gene=SC1B2.12c;gene_biotype=protein_coding;gene_synonym=SC1B2.12c;locus_tag=SCO6906
NC_003888.3	RefSeq	CDS	7669618	7671207	.	-	0	ID=cds6840;Parent=gene6968;Dbxref=Genbank:NP_630975.1,GeneID:1102345;Name=NP_630975.1;Note=SC1B2.12c%2C unknown%2C len: 529 aa. Contains a 4xRPPHSPGPTPPRTKD repeat towards the C-terminal. Note low G+C content of this CDS (57.23 %25);gbkey=CDS;gene=SC1B2.12c;product=hypothetical protein;protein_id=NP_630975.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7669782	7670015	.	+	.	ID=id8999;Note=repeat region with the sequence CGACCACCCCACAGTCCGGGACCGACACCACCCAGGACCAAGGAC perfectly repeated 4x and degenerately 1x (CACCGCAAAGTCCGGGACCGAGAGCACCGAGGACCGAGGAC).;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7671335	7672108	.	+	.	ID=gene6969;Dbxref=GeneID:1102346;Name=SC1B2.13;gbkey=Gene;gene=SC1B2.13;gene_biotype=protein_coding;gene_synonym=SC1B2.13;locus_tag=SCO6907
NC_003888.3	RefSeq	CDS	7671335	7672108	.	+	0	ID=cds6841;Parent=gene6969;Dbxref=Genbank:NP_630976.1,GeneID:1102346;Name=NP_630976.1;Note=SC1B2.13%2C possible DNA ligase%2C len: 257 aa. Similar in parts to Archaeoglobus fulgidus SW:DNLI_ARCFU(EMBL:AE001061) DNA ligase (EC 6.5.1.1) (556 aa)%2C fasta scores opt: 175 z-score: 199.4 E(): 0.0012 28.9%25 identity in 173 aa overlap and to Streptomyces coelicolor TR:Q9XAM3(EMBL:AL079355) DNA ligase%2C SC4C6.17C (355 aa)%2C fasta scores opt: 366 z-score: 413.9 E(): 1.4e-15 32.9%25 identity in 237 aa overlap.;gbkey=CDS;gene=SC1B2.13;product=DNA ligase;protein_id=NP_630976.1;transl_table=11
NC_003888.3	RefSeq	gene	7672687	7673991	.	-	.	ID=gene6970;Dbxref=GeneID:1102347;Name=SC1B2.14c;gbkey=Gene;gene=SC1B2.14c;gene_biotype=protein_coding;gene_synonym=SC1B2.14c;locus_tag=SCO6908
NC_003888.3	RefSeq	CDS	7672687	7673991	.	-	0	ID=cds6842;Parent=gene6970;Dbxref=Genbank:NP_630977.1,GeneID:1102347;Name=NP_630977.1;Note=SC1B2.14c%2C unknown%2C len: 434 aa.;gbkey=CDS;gene=SC1B2.14c;product=hypothetical protein;protein_id=NP_630977.1;transl_table=11
NC_003888.3	RefSeq	gene	7674795	7675178	.	+	.	ID=gene6971;Dbxref=GeneID:1102348;Name=SC1B2.15;gbkey=Gene;gene=SC1B2.15;gene_biotype=protein_coding;gene_synonym=SC1B2.15;locus_tag=SCO6909
NC_003888.3	RefSeq	CDS	7674795	7675178	.	+	0	ID=cds6843;Parent=gene6971;Dbxref=Genbank:NP_630978.1,GeneID:1102348;Name=NP_630978.1;Note=SC1B2.15%2C unknown%2C len: 127 aa.;gbkey=CDS;gene=SC1B2.15;product=hypothetical protein;protein_id=NP_630978.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7675597	7676697	.	-	.	ID=id9000;Note=insertion element.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7675597	7675608	.	-	.	ID=id9001;Note=terminal inverted repeat;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7675634	7676473	.	-	.	ID=gene6972;Dbxref=GeneID:1102349;Name=SC1B2.16c;gbkey=Gene;gene=SC1B2.16c;gene_biotype=protein_coding;gene_synonym=SC1B2.16c;locus_tag=SCO6910
NC_003888.3	RefSeq	CDS	7675634	7676473	.	-	0	ID=cds6844;Parent=gene6972;Dbxref=Genbank:NP_630979.1,GeneID:1102349;Name=NP_630979.1;Note=SC1B2.16c%2C insertion element IS468B transposase%2C len: 279 aa. Identical to several Streptomyces coelicolor transposases e.g. TR:Q9Z9H3(EMBL:AB024596) SCJ11.27C (279 aa)%2C fasta scores opt: 1839 z-score: 2192.4 E():0 99.6%25 identity in 279 aa overlap and TR:CAB38475(EMBL:AL035636) transposase SCH5.01 (fragment) (>229 aa)%2C fasta scores opt: 1502 z-score: 1793.3 E(): 0 100.0%25 identity in 229 aa overlap. Contains Pfam matches to entries PF01511 Transposase_6%2C Transposase and Pfam match to entry PF01675 Transposase_13%2C Transposase.;gbkey=CDS;gene=SC1B2.16c;product=insertion element transposase;protein_id=NP_630979.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7675700	7675948	.	-	.	ID=id9002;Dbxref=GeneID:1102349;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 83.30%2C E-value 5e-21;gbkey=misc_feature;gene=SC1B2.16c
NC_003888.3	RefSeq	sequence_feature	7676078	7676332	.	-	.	ID=id9003;Dbxref=GeneID:1102349;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 106.60%2C E-value 4.9e-28;gbkey=misc_feature;gene=SC1B2.16c
NC_003888.3	RefSeq	sequence_feature	7676687	7676697	.	-	.	ID=id9004;Note=terminal inverted repeat;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7676696	7677563	.	+	.	ID=id9005;Note=probable insertion sequence IS1647;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	7676696	7676716	.	+	.	ID=id9006;Note=terminal inverted repeat;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7676742	7677550	.	+	.	ID=gene6973;Dbxref=GeneID:1102350;Name=SC1B2.17;gbkey=Gene;gene=SC1B2.17;gene_biotype=pseudogene;gene_synonym=SC1B2.17,SC1B2.18;locus_tag=SCO6911;pseudo=true
NC_003888.3	RefSeq	sequence_feature	7676742	7677550	.	+	.	ID=id9007;Dbxref=GeneID:1102350;Note=SC1B2.17%2C probable insertion element IS1647 transposase%2C len: 119 aa. Identical Streptomyces coelicolor TR:O69846(EMBL:AL023702) insertion element IS1647 transposase%2C SC1C3.04 (119 aa)%2C fasta scores opt: 821 z-score: 1063.8 E(): 0 100.0%25 identity in 119 aa overlap. Also highly similar to many others e.g. Streptomyces coelicolor TR:CAB52913(EMBL:AL109949) transposase%2C SCJ11.28 (fragment) (116 aa)%2C fasta scores opt: 623 z-score: 810.9 E(): 0 77.4%25 identity in 115 aa overlap. The complete transposase is probably translated by ribosomal frameshifting into the downstream CDS.~SC1B2.18%2Cprobable insertion element IS1647 transposase%2C len: 150 aa. Identical Streptomyces coelicolor TR:O69847(EMBL:AL023702) insertion element IS1647 transposase%2C SC1C3.05 (150 aa)%2C fasta scores opt: 1038 z-score: 1276.4 E():0 99.3%25 identity in 150 aa overlap. Contains a Pfam match to entry PF01675 Transposase_13%2C Transposase. The complete transposase is probably translated by ribosomal frameshifting from the upstream ORF.%3Bprobable insertion element IS1647 transposase.;gbkey=misc_feature;gene=SC1B2.17
NC_003888.3	RefSeq	sequence_feature	7677087	7677094	.	+	.	ID=id9008;Dbxref=GeneID:1102350;Note=possible programmed ribosomal frameshift signal;gbkey=misc_feature;gene=SC1B2.17
NC_003888.3	RefSeq	sequence_feature	7677272	7677514	.	+	.	ID=id9009;Dbxref=GeneID:1102350;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 5.70%2C E-value 0.00085;gbkey=misc_feature;gene=SC1B2.17
NC_003888.3	RefSeq	sequence_feature	7677543	7677563	.	+	.	ID=id9010;Note=terminal inverted repeat;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	7677983	7677990	.	+	.	ID=id9011;gbkey=RBS
NC_003888.3	RefSeq	gene	7677996	7678349	.	+	.	ID=gene6974;Dbxref=GeneID:1102351;Name=SC1B2.19;gbkey=Gene;gene=SC1B2.19;gene_biotype=protein_coding;gene_synonym=SC1B2.19;locus_tag=SCO6913
NC_003888.3	RefSeq	CDS	7677996	7678349	.	+	0	ID=cds6845;Parent=gene6974;Dbxref=Genbank:NP_630980.1,GeneID:1102351;Name=NP_630980.1;Note=SC1B2.19%2C unknown%2C len: 117 aa.;gbkey=CDS;gene=SC1B2.19;product=hypothetical protein;protein_id=NP_630980.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7678443	7678448	.	+	.	ID=id9012;gbkey=RBS
NC_003888.3	RefSeq	gene	7678455	7678745	.	+	.	ID=gene6975;Dbxref=GeneID:1102352;Name=SC1B2.20;gbkey=Gene;gene=SC1B2.20;gene_biotype=protein_coding;gene_synonym=SC1B2.20;locus_tag=SCO6914
NC_003888.3	RefSeq	CDS	7678455	7678745	.	+	0	ID=cds6846;Parent=gene6975;Dbxref=Genbank:NP_630981.1,GeneID:1102352;Name=NP_630981.1;Note=SC1B2.20%2C unknown%2C len: 96 aa.;gbkey=CDS;gene=SC1B2.20;product=hypothetical protein;protein_id=NP_630981.1;transl_table=11
NC_003888.3	RefSeq	gene	7678761	7679582	.	+	.	ID=gene6976;Dbxref=GeneID:1102353;Name=SC1B2.21;gbkey=Gene;gene=SC1B2.21;gene_biotype=protein_coding;gene_synonym=SC1B2.21;locus_tag=SCO6915
NC_003888.3	RefSeq	CDS	7678761	7679582	.	+	0	ID=cds6847;Parent=gene6976;Dbxref=Genbank:NP_630982.1,GeneID:1102353;Name=NP_630982.1;Note=SC1B2.21%2C unknown%2C len: 273 aa.;gbkey=CDS;gene=SC1B2.21;product=hypothetical protein;protein_id=NP_630982.1;transl_table=11
NC_003888.3	RefSeq	gene	7679755	7680447	.	-	.	ID=gene6977;Dbxref=GeneID:1102354;Name=SC1B2.22c;gbkey=Gene;gene=SC1B2.22c;gene_biotype=protein_coding;gene_synonym=SC1B2.22c;locus_tag=SCO6916
NC_003888.3	RefSeq	CDS	7679755	7680447	.	-	0	ID=cds6848;Parent=gene6977;Dbxref=Genbank:NP_630983.1,GeneID:1102354;Name=NP_630983.1;Note=SC1B2.22c%2C hypothetical protein%2C len: 230 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC1B2.22c;product=hypothetical protein;protein_id=NP_630983.1;transl_table=11
NC_003888.3	RefSeq	gene	7680528	7681016	.	-	.	ID=gene6978;Dbxref=GeneID:1102355;Name=SC1B2.23c;gbkey=Gene;gene=SC1B2.23c;gene_biotype=protein_coding;gene_synonym=SC1B2.23c;locus_tag=SCO6917
NC_003888.3	RefSeq	CDS	7680528	7681016	.	-	0	ID=cds6849;Parent=gene6978;Dbxref=Genbank:NP_630984.1,GeneID:1102355;Name=NP_630984.1;Note=SC1B2.23c%2C unknown%2C len: 162 aa.;gbkey=CDS;gene=SC1B2.23c;product=hypothetical protein;protein_id=NP_630984.1;transl_table=11
NC_003888.3	RefSeq	gene	7681180	7682922	.	-	.	ID=gene6979;Dbxref=GeneID:1102356;Name=SC1B2.24c;gbkey=Gene;gene=SC1B2.24c;gene_biotype=protein_coding;gene_synonym=SC1B2.24c;locus_tag=SCO6918
NC_003888.3	RefSeq	CDS	7681180	7682922	.	-	0	ID=cds6850;Parent=gene6979;Dbxref=Genbank:NP_630985.1,GeneID:1102356;Name=NP_630985.1;Note=SC1B2.24c%2C unknown%2C len: 580 aa.;gbkey=CDS;gene=SC1B2.24c;product=hypothetical protein;protein_id=NP_630985.1;transl_table=11
NC_003888.3	RefSeq	gene	7682938	7683453	.	-	.	ID=gene6980;Dbxref=GeneID:1102357;Name=SC1B2.25c;gbkey=Gene;gene=SC1B2.25c;gene_biotype=protein_coding;gene_synonym=SC1B2.25c;locus_tag=SCO6919
NC_003888.3	RefSeq	CDS	7682938	7683453	.	-	0	ID=cds6851;Parent=gene6980;Dbxref=Genbank:NP_630986.1,GeneID:1102357;Name=NP_630986.1;Note=SC1B2.25c%2C unknown%2C len: 171 aa. The N-terminus of the predicted protein product of this CDS is hydrophilic.;gbkey=CDS;gene=SC1B2.25c;product=hypothetical protein;protein_id=NP_630986.1;transl_table=11
NC_003888.3	RefSeq	gene	7683546	7683878	.	-	.	ID=gene6981;Dbxref=GeneID:1102358;Name=SC1B2.26c;gbkey=Gene;gene=SC1B2.26c;gene_biotype=protein_coding;gene_synonym=SC1B2.26c;locus_tag=SCO6920
NC_003888.3	RefSeq	CDS	7683546	7683878	.	-	0	ID=cds6852;Parent=gene6981;Dbxref=Genbank:NP_630987.1,GeneID:1102358;Name=NP_630987.1;Note=SC1B2.26c%2C doubtful CDS%2C len: 110 aa.;gbkey=CDS;gene=SC1B2.26c;product=hypothetical protein;protein_id=NP_630987.1;transl_table=11
NC_003888.3	RefSeq	gene	7684057	7685787	.	-	.	ID=gene6982;Dbxref=GeneID:1102359;Name=SC1B2.27c;gbkey=Gene;gene=SC1B2.27c;gene_biotype=protein_coding;gene_synonym=SC1B2.27c;locus_tag=SCO6921
NC_003888.3	RefSeq	CDS	7684057	7685787	.	-	0	ID=cds6853;Parent=gene6982;Dbxref=Genbank:NP_630988.1,GeneID:1102359;Name=NP_630988.1;Note=SC1B2.27c%2C possible membrane protein%2C len: 576 aa. Contains a 4xPTTPQSGTDTTQDQG repeat sequence and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1B2.27c;product=hypothetical protein;protein_id=NP_630988.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7684375	7684594	.	-	.	ID=id9013;Dbxref=GeneID:1102359;Note=repeat region containing the sequence CCGACCACCCCACAGTCCGGGACCGACACCACCCAGGACCAAGGA repeated perfectly 4x and degenerately 1x: (CACCGCAAAGTCCGGGACCGAGAGCACCGAGGACCGAGGA).;gbkey=repeat_region;gene=SC1B2.27c
NC_003888.3	RefSeq	gene	7685784	7686425	.	-	.	ID=gene6983;Dbxref=GeneID:1102360;Name=SC1B2.28c;gbkey=Gene;gene=SC1B2.28c;gene_biotype=protein_coding;gene_synonym=SC1B2.28c;locus_tag=SCO6922
NC_003888.3	RefSeq	CDS	7685784	7686425	.	-	0	ID=cds6854;Parent=gene6983;Dbxref=Genbank:NP_630989.1,GeneID:1102360;Name=NP_630989.1;Note=SC1B2.28c%2C unknown%2C len: 213 aa. The N-terminus of this protein is highly similar to several proposed regulatory proteins e.g. Streptomyces coelicolor TR:Q9XAL5(EMBL:AL079355) transcriptional regulator%2C SC4C6.25 (81 aa)%2C fasta scores opt: 197 z-score: 226.2 E(): 3.9e-05 41.1%25 identity in 73 aa overlap.;gbkey=CDS;gene=SC1B2.28c;product=hypothetical protein;protein_id=NP_630989.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7686433	7686436	.	-	.	ID=id9014;gbkey=RBS
NC_003888.3	RefSeq	gene	7686586	7687302	.	-	.	ID=gene6984;Dbxref=GeneID:1102361;Name=SC1B2.29c;gbkey=Gene;gene=SC1B2.29c;gene_biotype=protein_coding;gene_synonym=SC1B2.29c;locus_tag=SCO6923
NC_003888.3	RefSeq	CDS	7686586	7687302	.	-	0	ID=cds6855;Parent=gene6984;Dbxref=Genbank:NP_630990.1,GeneID:1102361;Name=NP_630990.1;Note=SC1B2.29c%2C unknown%2C len: 238 aa.;gbkey=CDS;gene=SC1B2.29c;product=hypothetical protein;protein_id=NP_630990.1;transl_table=11
NC_003888.3	RefSeq	gene	7687305	7688201	.	-	.	ID=gene6985;Dbxref=GeneID:1102362;Name=SC1B2.30c;gbkey=Gene;gene=SC1B2.30c;gene_biotype=protein_coding;gene_synonym=SC1B2.30c;locus_tag=SCO6924
NC_003888.3	RefSeq	CDS	7687305	7688201	.	-	0	ID=cds6856;Parent=gene6985;Dbxref=Genbank:NP_630991.1,GeneID:1102362;Name=NP_630991.1;Note=SC1B2.30c%2C possible DNA-binding protein%2C len: 298 aa. Contains a helix-turn-helix motif situated between residues 66..87 (+2.59 SD).;gbkey=CDS;gene=SC1B2.30c;product=DNA-binding protein;protein_id=NP_630991.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7687310	7687314	.	-	.	ID=id9015;Dbxref=GeneID:1102362;gbkey=RBS;gene=SC1B2.30c
NC_003888.3	RefSeq	ribosome_entry_site	7688206	7688212	.	-	.	ID=id9016;gbkey=RBS
NC_003888.3	RefSeq	gene	7688836	7689048	.	-	.	ID=gene6986;Dbxref=GeneID:1102363;Name=SC1B2.31c;gbkey=Gene;gene=SC1B2.31c;gene_biotype=protein_coding;gene_synonym=SC1B2.31c;locus_tag=SCO6925
NC_003888.3	RefSeq	CDS	7688836	7689048	.	-	0	ID=cds6857;Parent=gene6986;Dbxref=Genbank:NP_630992.1,GeneID:1102363;Name=NP_630992.1;Note=SC1B2.31c%2C doubtful CDS (membrane protein)%2C len: 70 aa. Contains a TTA leucine codon%2C possible target for bldA regulation. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC1B2.31c;product=hypothetical protein;protein_id=NP_630992.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7688989	7688991	.	-	.	ID=id9017;Dbxref=GeneID:1102363;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC1B2.31c
NC_003888.3	RefSeq	gene	7689630	7690454	.	+	.	ID=gene6987;Dbxref=GeneID:1102364;Name=SC1B2.32;gbkey=Gene;gene=SC1B2.32;gene_biotype=protein_coding;gene_synonym=SC1B2.32;locus_tag=SCO6926
NC_003888.3	RefSeq	CDS	7689630	7690454	.	+	0	ID=cds6858;Parent=gene6987;Dbxref=Genbank:NP_630993.1,GeneID:1102364;Name=NP_630993.1;Note=SC1B2.32%2C unknown%2C len: 274 aa. Weakly similar to several including: Streptomyces coelicolor TR:CAB53276 (EMBL:AL109972)  DNA-binding protein%2C SCJ9A.15C (290 aa)%2C fasta scores opt: 225 z-score: 274.7 E(): 7.7e-08 29.0%25 identity in 238 aa overlap.;gbkey=CDS;gene=SC1B2.32;product=hypothetical protein;protein_id=NP_630993.1;transl_table=11
NC_003888.3	RefSeq	gene	7691781	7692905	.	-	.	ID=gene6988;Dbxref=GeneID:1102365;Name=SC1B2.33c;gbkey=Gene;gene=SC1B2.33c;gene_biotype=protein_coding;gene_synonym=SC1B2.33c;locus_tag=SCO6927
NC_003888.3	RefSeq	CDS	7691781	7692905	.	-	0	ID=cds6859;Parent=gene6988;Dbxref=Genbank:NP_630994.1,GeneID:1102365;Name=NP_630994.1;Note=SC1B2.33c%2C unknown%2C len: 374 aa.;gbkey=CDS;gene=SC1B2.33c;product=hypothetical protein;protein_id=NP_630994.1;transl_table=11
NC_003888.3	RefSeq	gene	7692907	7694997	.	-	.	ID=gene6989;Dbxref=GeneID:1102366;Name=SC1B2.34c;gbkey=Gene;gene=SC1B2.34c;gene_biotype=protein_coding;gene_synonym=SC1B2.34c;locus_tag=SCO6928
NC_003888.3	RefSeq	CDS	7692907	7694997	.	-	0	ID=cds6860;Parent=gene6989;Dbxref=Genbank:NP_630995.1,GeneID:1102366;Name=NP_630995.1;Note=SC1B2.34c%2C possible O-methyltransferase%2C len: 696 aa. Contains a central region which is similar to many protein-L-isoaspartate O-methyltransferases e.g. Escherichia coli SW:PIMT_ECOLI (EMBL:M63493) (207 aa)%2C fasta scores opt: 301 z-score: 340.3 E(): 1.7e-11 31.5%25 identity in 213 aa overlap and Streptomyces coelicolor TR:CAB71208 (EMBL:AL138538) SC6D10.13C (324 aa)%2C fasta scores opt: 442 z-score: 493.8 E(): 4.8e-20 36.9%25 identity in 306 aa overlap. Contains a Pfam match to entry PF01135 PCMT%2C Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).;gbkey=CDS;gene=SC1B2.34c;product=O-methyltransferase;protein_id=NP_630995.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7693465	7694109	.	-	.	ID=id9018;Dbxref=GeneID:1102366;Note=Pfam match to entry PF01135 PCMT%2C Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)%2C score 119.30%2C E-value 7.2e-32;gbkey=misc_feature;gene=SC1B2.34c
NC_003888.3	RefSeq	gene	7695016	7696275	.	-	.	ID=gene6990;Dbxref=GeneID:1102367;Name=SC1B2.35c;gbkey=Gene;gene=SC1B2.35c;gene_biotype=protein_coding;gene_synonym=SC1B2.35c,SC1G8.01c;locus_tag=SCO6929
NC_003888.3	RefSeq	CDS	7695016	7696275	.	-	0	ID=cds6861;Parent=gene6990;Dbxref=Genbank:NP_733718.1,GeneID:1102367;Name=NP_733718.1;Note=SC1G8.01c%2C unknown%2C partial CDS%2Clen: >270 aa. Weakly similar to Bacillus subtilis SW:SPAC_BACSU (EMBL:M86869) subtilin biosynthetic protein%2C possibly involved in export%2C SpaC (441 aa)%2C fasta scores opt: 319 z-score: 378.0 E(): 1.4e-13 29.0%25 identity in 245 aa overlap.~SC1B2.35c%2C unknown%2C partial CDS%2C len: >181 aa. Similar to Streptomyces coelicolor TR:CAB55532 (EMBL:AL117322) hypothetical 49.0 kd protein%2C SCF1.12 (466 aa)%2C fasta scores opt: 238 z-score: 283.2 E(): 2.6e-08 31.1%25 identity in 180 aa overlap.;gbkey=CDS;gene=SC1B2.35c;product=hypothetical protein;protein_id=NP_733718.1;transl_table=11
NC_003888.3	RefSeq	gene	7696262	7699360	.	-	.	ID=gene6991;Dbxref=GeneID:1102368;Name=SC1G8.02c;gbkey=Gene;gene=SC1G8.02c;gene_biotype=protein_coding;gene_synonym=SC1G8.02c;locus_tag=SCO6930
NC_003888.3	RefSeq	CDS	7696262	7699360	.	-	0	ID=cds6862;Parent=gene6991;Dbxref=Genbank:NP_630996.1,GeneID:1102368;Name=NP_630996.1;Note=SC1G8.02c%2C unknown%2C len: 1032 aa. Similar to a number of proteins involved in the posttranslational modification of the lantibiotics e.g. Bacillus subtilis SW:SPAB_BACSU (EMBL:L24075) subtilin biosynthesis protein%2C SpaB (1030 aa)%2C fasta scores opt: 516 z-score: 571.0 E(): 2.4e-24 22.1%25 identity in 988 aa overlap. Also similar to Streptomyces coelicolor TR:CAB55531 (EMBL:AL117322) hypothetical 114.5 kd protein%2C SCF1.11 (1053 aa)%2C fasta scores opt: 884 z-score: 982.0 E(): 0 30.6%25 identity in 1081 aa overlap. Contains a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC1G8.02c;product=hypothetical protein;protein_id=NP_630996.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7698437	7698439	.	-	.	ID=id9019;Dbxref=GeneID:1102368;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC1G8.02c
NC_003888.3	RefSeq	gene	7699447	7699626	.	-	.	ID=gene6992;Dbxref=GeneID:1102369;Name=SC1G8.03c;gbkey=Gene;gene=SC1G8.03c;gene_biotype=protein_coding;gene_synonym=SC1G8.03c;locus_tag=SCO6931
NC_003888.3	RefSeq	CDS	7699447	7699626	.	-	0	ID=cds6863;Parent=gene6992;Dbxref=Genbank:NP_630997.1,GeneID:1102369;Name=NP_630997.1;Note=SC1G8.03c%2C unknown%2C len: 59 aa. Highly similar to the upstream CDS SC1G8.04c (43 aa)%2C fasta scores opt: 261 z-score: 356.0 E(): 2.7e-14 97.5%25 identity in 40 aa overlap.;gbkey=CDS;gene=SC1G8.03c;product=hypothetical protein;protein_id=NP_630997.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7699447	7699564	.	-	.	ID=id9020;Dbxref=GeneID:1102369;Note=shares 99 %25 sequence identity with the duplicated region: complement(4198..4315).;gbkey=repeat_region;gene=SC1G8.03c
NC_003888.3	RefSeq	ribosome_entry_site	7699635	7699638	.	-	.	ID=id9021;gbkey=RBS
NC_003888.3	RefSeq	gene	7699664	7699795	.	-	.	ID=gene6993;Dbxref=GeneID:1102370;Name=SC1G8.04c;gbkey=Gene;gene=SC1G8.04c;gene_biotype=protein_coding;gene_synonym=SC1G8.04c;locus_tag=SCO6932
NC_003888.3	RefSeq	CDS	7699664	7699795	.	-	0	ID=cds6864;Parent=gene6993;Dbxref=Genbank:NP_630998.1,GeneID:1102370;Name=NP_630998.1;Note=SC1G8.04c%2C unknown%2C len: 43 aa. Highly similar to the downstream CDS SC1G8.03c (59 aa)%2C fasta scrores opt: 261 z-score: 356.0 E(): 2.7e-14 97.5%25 identity in 40 aa overlap.;gbkey=CDS;gene=SC1G8.04c;product=hypothetical protein;protein_id=NP_630998.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7699664	7699781	.	-	.	ID=id9022;Dbxref=GeneID:1102370;Note=shares 99 %25 sequence identity with the duplicated region: complement(3981..4098).;gbkey=repeat_region;gene=SC1G8.04c
NC_003888.3	RefSeq	ribosome_entry_site	7699805	7699809	.	-	.	ID=id9023;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7699868	7699871	.	+	.	ID=id9024;gbkey=RBS
NC_003888.3	RefSeq	gene	7699873	7700322	.	+	.	ID=gene6994;Dbxref=GeneID:1102371;Name=SC1G8.05;gbkey=Gene;gene=SC1G8.05;gene_biotype=protein_coding;gene_synonym=SC1G8.05;locus_tag=SCO6933
NC_003888.3	RefSeq	CDS	7699873	7700322	.	+	0	ID=cds6865;Parent=gene6994;Dbxref=Genbank:NP_630999.1,GeneID:1102371;Name=NP_630999.1;Note=SC1G8.05%2C unknown%2C len: 149 aa.;gbkey=CDS;gene=SC1G8.05;product=hypothetical protein;protein_id=NP_630999.1;transl_table=11
NC_003888.3	RefSeq	gene	7700261	7700728	.	-	.	ID=gene6995;Dbxref=GeneID:1102372;Name=SC1G8.06c;gbkey=Gene;gene=SC1G8.06c;gene_biotype=protein_coding;gene_synonym=SC1G8.06c;locus_tag=SCO6934
NC_003888.3	RefSeq	CDS	7700261	7700728	.	-	0	ID=cds6866;Parent=gene6995;Dbxref=Genbank:NP_631000.1,GeneID:1102372;Name=NP_631000.1;Note=SC1G8.06c%2C possible hypothetical protein%2C len: 155 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC1G8.06c;product=hypothetical protein;protein_id=NP_631000.1;transl_table=11
NC_003888.3	RefSeq	gene	7700803	7701378	.	-	.	ID=gene6996;Dbxref=GeneID:1102373;Name=SC1G8.07c;gbkey=Gene;gene=SC1G8.07c;gene_biotype=protein_coding;gene_synonym=SC1G8.07c;locus_tag=SCO6935
NC_003888.3	RefSeq	CDS	7700803	7701378	.	-	0	ID=cds6867;Parent=gene6996;Dbxref=Genbank:NP_631001.1,GeneID:1102373;Name=NP_631001.1;Note=SC1G8.07c%2C unknown%2C len: 191 aa.;gbkey=CDS;gene=SC1G8.07c;product=hypothetical protein;protein_id=NP_631001.1;transl_table=11
NC_003888.3	RefSeq	gene	7701375	7702028	.	-	.	ID=gene6997;Dbxref=GeneID:1102374;Name=SC1G8.08;gbkey=Gene;gene=SC1G8.08;gene_biotype=protein_coding;gene_synonym=SC1G8.08;locus_tag=SCO6936
NC_003888.3	RefSeq	CDS	7701375	7702028	.	-	0	ID=cds6868;Parent=gene6997;Dbxref=Genbank:NP_631002.1,GeneID:1102374;Name=NP_631002.1;Note=SC1G8.08%2C unknown%2C len: 217 aa. Weakly similar to Streptomyces coelicolor TR:CAB56672 (EMBL:AL121596) hypothetical protein%2C SCF51A.20(252 aa)%2C fasta scores opt: 111 z-score: 140.7 E(): 2.2 27.9%25 identity in 190 aa overlap.;gbkey=CDS;gene=SC1G8.08;product=hypothetical protein;protein_id=NP_631002.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7701392	7701396	.	-	.	ID=id9025;Dbxref=GeneID:1102374;gbkey=RBS;gene=SC1G8.08
NC_003888.3	RefSeq	gene	7702025	7702585	.	-	.	ID=gene6998;Dbxref=GeneID:1102375;Name=SC1G8.09c;gbkey=Gene;gene=SC1G8.09c;gene_biotype=protein_coding;gene_synonym=SC1G8.09c;locus_tag=SCO6937
NC_003888.3	RefSeq	CDS	7702025	7702585	.	-	0	ID=cds6869;Parent=gene6998;Dbxref=Genbank:NP_631003.1,GeneID:1102375;Name=NP_631003.1;Note=SC1G8.09c%2C possible DNA-binding protein%2C len: 186 aa. Contains a possible helix-turn-helix motif situated between residues 54..75 (+4.70 SD).;gbkey=CDS;gene=SC1G8.09c;product=DNA-binding protein;protein_id=NP_631003.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7702036	7702039	.	-	.	ID=id9026;Dbxref=GeneID:1102375;gbkey=RBS;gene=SC1G8.09c
NC_003888.3	RefSeq	gene	7702634	7703887	.	-	.	ID=gene6999;Dbxref=GeneID:1102376;Name=SC1G8.10c;gbkey=Gene;gene=SC1G8.10c;gene_biotype=protein_coding;gene_synonym=SC1G8.10c;locus_tag=SCO6938
NC_003888.3	RefSeq	CDS	7702634	7703887	.	-	0	ID=cds6870;Parent=gene6999;Dbxref=Genbank:NP_631004.1,GeneID:1102376;Name=NP_631004.1;Note=SC1G8.10c%2C probable acyl-CoA dehydrogenase%2C len: 417 aa. Similar to Bacillus subtilis TR:ACDB_BACSU (EMBL:U29084) acyl-CoA dehydrogenase (EC 1.3.99.-) MmgC (379 aa)%2C fasta scores opt: 651 z-score: 737.5 E(): 0 31.1%25 identity in 380 aa overlap and Streptomyces coelicolor TR:CAB87216 (EMBL:AL163641) acyl-CoA dehydrogenase%2C SCC105.10 (386 aa)%2C fasta scores opt: 575 z-score: 651.8 E(): 7.6e-29 31.7%25 identity in 382 aa overlap. Contains a Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase and contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1G8.10c;product=acyl-CoA dehydrogenase;protein_id=NP_631004.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7702721	7703842	.	-	.	ID=id9027;Dbxref=GeneID:1102376;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C score 142.40%2C E-value 6.2e-41;gbkey=misc_feature;gene=SC1G8.10c
NC_003888.3	RefSeq	gene	7703970	7704611	.	-	.	ID=gene7000;Dbxref=GeneID:1102377;Name=SC1G8.11c;gbkey=Gene;gene=SC1G8.11c;gene_biotype=protein_coding;gene_synonym=SC1G8.11c;locus_tag=SCO6939
NC_003888.3	RefSeq	CDS	7703970	7704611	.	-	0	ID=cds6871;Parent=gene7000;Dbxref=Genbank:NP_631005.1,GeneID:1102377;Name=NP_631005.1;Note=SC1G8.11c%2C unknown%2C len: 213 aa. Similar to Streptomyces coelicolor TR:CAB71245(EMBL:AL138598) hypothetical 20.6 kd protein%2C SC1A2.07 (191 aa)%2C fasta scores opt: 376 z-score: 435.5 E(): 8.6e-17 43.9%25 identity in 164 aa overlap.;gbkey=CDS;gene=SC1G8.11c;product=hypothetical protein;protein_id=NP_631005.1;transl_table=11
NC_003888.3	RefSeq	gene	7704611	7705189	.	-	.	ID=gene7001;Dbxref=GeneID:1102378;Name=cvnD8;gbkey=Gene;gene=cvnD8;gene_biotype=protein_coding;gene_synonym=cvnD8,SC1G8.12c;locus_tag=SCO6940
NC_003888.3	RefSeq	CDS	7704611	7705189	.	-	0	ID=cds6872;Parent=gene7001;Dbxref=Genbank:NP_631006.1,GeneID:1102378;Name=NP_631006.1;Note=SC1G8.12c%2C cvnD8%2C possible ATP/GTP binding protein%2C len: 192 aa. Highly similar to many Streptomyces coelicolor ATP/GTP binding proteins including: TR:CAB71244(EMBL:AL138598) SC1A2.06 (184 aa)%2C fasta scores opt: 630 z-score: 788.4 E(): 0 56.6%25 identity in 182 aa overlap and TR:Q9X833(EMBL:AL049727) SC9B1.13C (181 aa)%2C fasta scores opt: 627 z-score: 784.8 E(): 0 58.0%25 identity in 176 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=cvnD8;product=ATP/GTP binding protein;protein_id=NP_631006.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7704618	7704621	.	-	.	ID=id9028;Dbxref=GeneID:1102378;gbkey=RBS;gene=cvnD8
NC_003888.3	RefSeq	sequence_feature	7705157	7705180	.	-	.	ID=id9029;Dbxref=GeneID:1102378;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD8
NC_003888.3	RefSeq	gene	7705245	7705652	.	-	.	ID=gene7002;Dbxref=GeneID:1102379;Name=cvnC8;gbkey=Gene;gene=cvnC8;gene_biotype=protein_coding;gene_synonym=cvnC8,SC1G8.13c;locus_tag=SCO6941
NC_003888.3	RefSeq	CDS	7705245	7705652	.	-	0	ID=cds6873;Parent=gene7002;Dbxref=Genbank:NP_631007.1,GeneID:1102379;Name=NP_631007.1;Note=SC1G8.13c%2C cvnC8%2C unknown%2C len: 135 aa. Similar to many proteins of undefined function from Streptomyces coelicolor including: TR:O86520 (EMBL:AL031124) SC1C2.19C (132 aa)%2C fasta scores opt: 204 z-score: 259.5 E(): 5.4e-07 35.6%25 identity in 118 aa overlap and TR:Q9X834 (EMBL:AL049727) SC9B1.14C (119 aa)%2C fasta scores opt: 137 z-score: 181.4 E(): 0.012 42.2%25 identity in 90 aa overlap.;gbkey=CDS;gene=cvnC8;product=hypothetical protein;protein_id=NP_631007.1;transl_table=11
NC_003888.3	RefSeq	gene	7705649	7706164	.	-	.	ID=gene7003;Dbxref=GeneID:1102380;Name=cvnB8;gbkey=Gene;gene=cvnB8;gene_biotype=protein_coding;gene_synonym=cvnB8,SC1G8.14c;locus_tag=SCO6942
NC_003888.3	RefSeq	CDS	7705649	7706164	.	-	0	ID=cds6874;Parent=gene7003;Dbxref=Genbank:NP_631008.1,GeneID:1102380;Name=NP_631008.1;Note=SC1G8.14c%2C cvnB8%2C unknown%2C len: 171 aa. Similar to many proteins of undefined function from Streptomyces coelicolor including: TR:CAB61281(EMBL:AL132991) SCF55.11C (152 aa)%2C fasta scores opt: 158 z-score: 212.6 E(): 0.00022 33.1%25 identity in 160 aa overlap and TR:O86521(EMBL:AL031124) SC1C2.20C (140 aa)%2C fasta scores opt: 177 z-score: 237.3 E(): 9.4e-06 29.4%25 identity in 143 aa overlap.;gbkey=CDS;gene=cvnB8;product=hypothetical protein;protein_id=NP_631008.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7705656	7705660	.	-	.	ID=id9030;Dbxref=GeneID:1102380;gbkey=RBS;gene=cvnB8
NC_003888.3	RefSeq	ribosome_entry_site	7706173	7706176	.	-	.	ID=id9031;gbkey=RBS
NC_003888.3	RefSeq	gene	7706226	7707743	.	-	.	ID=gene7004;Dbxref=GeneID:1102381;Name=cvnA8;gbkey=Gene;gene=cvnA8;gene_biotype=protein_coding;gene_synonym=cvnA8,SC1G8.15c;locus_tag=SCO6943
NC_003888.3	RefSeq	CDS	7706226	7707743	.	-	0	ID=cds6875;Parent=gene7004;Dbxref=Genbank:NP_631009.1,GeneID:1102381;Name=NP_631009.1;Note=SC1G8.15c%2C cvnA8%2C possible sensor histidine-kinase%2C len: 505 aa. Highly similar to many proteins from Streptomyces coelicolor including: TR:CAB71241 (EMBL:AL138598) membrane protein%2C SC1A2.03 (650 aa)%2C fasta scores opt: 700 z-score: 669.8 E(): 7.6e-30 34.2%25 identity in 524 aa overlap and TR:CAB76341 (EMBL:AL158061) sensor histidine-kinase%2C SC6D11.18C (543 aa)%2C fasta scores opt: 433 z-score: 417.8 E(): 8.3e-16 28.6%25 identity in 482 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00512 signal%2C Histidine kinase. Also contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=cvnA8;product=sensor histidine-kinase;protein_id=NP_631009.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7706586	7707197	.	-	.	ID=id9032;Dbxref=GeneID:1102381;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score -32.90%2C E-value 0.0029;gbkey=misc_feature;gene=cvnA8
NC_003888.3	RefSeq	sequence_feature	7707405	7707428	.	-	.	ID=id9033;Dbxref=GeneID:1102381;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnA8
NC_003888.3	RefSeq	ribosome_entry_site	7707750	7707753	.	-	.	ID=id9034;gbkey=RBS
NC_003888.3	RefSeq	gene	7707771	7709672	.	-	.	ID=gene7005;Dbxref=GeneID:1102382;Name=SC1G8.16c;gbkey=Gene;gene=SC1G8.16c;gene_biotype=protein_coding;gene_synonym=SC1G8.16c;locus_tag=SCO6944
NC_003888.3	RefSeq	CDS	7707771	7709672	.	-	0	ID=cds6876;Parent=gene7005;Dbxref=Genbank:NP_631010.1,GeneID:1102382;Name=NP_631010.1;Note=SC1G8.16c%2C conserved hypothetical protein%2C len: 633 aa. Highly similar to several proteins of undefined function including: Streptomyces coelicolor TR:CAB52841 (EMBL:AL109848) SCI51.17 (612 aa)%2C fasta scores opt: 2658 z-score: 3108.3 E():0 64.4%25 identity in 590 aa overlap and Schizosaccharomyces pombe (Fission yeast) SW:YAY3_SCHPO (EMBL:Z69380) SPAC4H3.03C (649 aa)%2C fasta scores opt: 943 z-score: 1101.2 E():0 32.8%25 identity in 640 aa overlap.;gbkey=CDS;gene=SC1G8.16c;product=hypothetical protein;protein_id=NP_631010.1;transl_table=11
NC_003888.3	RefSeq	gene	7709876	7710085	.	-	.	ID=gene7006;Dbxref=GeneID:1102383;Name=SC1G8.17c;gbkey=Gene;gene=SC1G8.17c;gene_biotype=protein_coding;gene_synonym=SC1G8.17c;locus_tag=SCO6945
NC_003888.3	RefSeq	CDS	7709876	7710085	.	-	0	ID=cds6877;Parent=gene7006;Dbxref=Genbank:NP_631011.1,GeneID:1102383;Name=NP_631011.1;Note=SC1G8.17c%2C possible membrane protein%2C len: 69 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC1G8.17c;product=hypothetical protein;protein_id=NP_631011.1;transl_table=11
NC_003888.3	RefSeq	gene	7710167	7710406	.	+	.	ID=gene7007;Dbxref=GeneID:1102384;Name=SC1G8.18;gbkey=Gene;gene=SC1G8.18;gene_biotype=protein_coding;gene_synonym=SC1G8.18;locus_tag=SCO6946
NC_003888.3	RefSeq	CDS	7710167	7710406	.	+	0	ID=cds6878;Parent=gene7007;Dbxref=Genbank:NP_631012.1,GeneID:1102384;Name=NP_631012.1;Note=SC1G8.18%2C unknown%2C len: 79 aa.;gbkey=CDS;gene=SC1G8.18;product=hypothetical protein;protein_id=NP_631012.1;transl_table=11
NC_003888.3	RefSeq	gene	7710446	7711951	.	+	.	ID=gene7008;Dbxref=GeneID:1102385;Name=SC1G8.19;gbkey=Gene;gene=SC1G8.19;gene_biotype=protein_coding;gene_synonym=SC1G8.19;locus_tag=SCO6947
NC_003888.3	RefSeq	CDS	7710446	7711951	.	+	0	ID=cds6879;Parent=gene7008;Dbxref=Genbank:NP_631013.1,GeneID:1102385;Name=NP_631013.1;Note=SC1G8.19%2C unknown%2C len: 501 aa. Similar to several including: Streptomyces griseus SW:SP15_STRGR (EMBL:M32687) sporulation protein (529 aa)%2C fasta scores opt: 530 z-score: 614.9 E(): 8.7e-27 28.5%25 identity in 534 aa overlap and Streptomyces coelicolor TR:O88053(EMBL:AL031541) transcriptional regulator%2C SCI35.15C (446 aa)%2C fasta scores opt: 537 z-score: 624.2 E(): 2.6e-27 31.4%25 identity in 440 aa overlap;gbkey=CDS;gene=SC1G8.19;product=hypothetical protein;protein_id=NP_631013.1;transl_table=11
NC_003888.3	RefSeq	gene	7711970	7712521	.	+	.	ID=gene7009;Dbxref=GeneID:1102386;Name=SC1G8.20;gbkey=Gene;gene=SC1G8.20;gene_biotype=protein_coding;gene_synonym=SC1G8.20,SC6F7.01;locus_tag=SCO6948
NC_003888.3	RefSeq	CDS	7711970	7712521	.	+	0	ID=cds6880;Parent=gene7009;Dbxref=Genbank:NP_631014.1,GeneID:1102386;Name=NP_631014.1;Note=SC6F7.01%2C unknown%2C partial CDS%2C len:> 157 aa. Weakly similar to several including: Aeropyrum pernix TR:Q9YFC8 (EMBL:AP000059) hypothetical protein (168 aa)%2C fasta scores opt: 231 z-score: 293.6 E(): 6.5e-09 35.8%25 identity in 137 aa overlap.~SC1G8.20%2C unknown%2C len: 183 aa. Weakly similar to several including: Aeropyrum pernix TR:Q9YFC8 (EMBL:AP000059) hypothetical protein (168 aa)%2C fasta scores opt: 231 z-score: 290.8 E(): 9.8e-09 35.8%25 identity in 137 aa overlap. Overlaps and extends into CDS SC6F7.01 on the adjoining cosmid.;gbkey=CDS;gene=SC1G8.20;product=hypothetical protein;protein_id=NP_631014.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7712047	7719804	.	+	.	ID=id9035;Note=low G+C region (64.88 %25);gbkey=misc_feature
NC_003888.3	RefSeq	gene	7712805	7713266	.	-	.	ID=gene7010;Dbxref=GeneID:1102387;Name=SC6F7.02c;gbkey=Gene;gene=SC6F7.02c;gene_biotype=protein_coding;gene_synonym=SC6F7.02c;locus_tag=SCO6949
NC_003888.3	RefSeq	CDS	7712805	7713266	.	-	0	ID=cds6881;Parent=gene7010;Dbxref=Genbank:NP_631015.1,GeneID:1102387;Name=NP_631015.1;Note=SC6F7.02c%2C unknown%2C len: 153 aa. Weakly similar to several including: Streptomyces albus TR:AAD46514 (EMBL:AF145724)  regulatory protein%2C SitI (137 aa)%2C fasta scores opt:174 z-score: 238.9 E(): 7.2e-06 34.5%25 identity in 116 aa overlap.;gbkey=CDS;gene=SC6F7.02c;product=hypothetical protein;protein_id=NP_631015.1;transl_table=11
NC_003888.3	RefSeq	gene	7713425	7714828	.	+	.	ID=gene7011;Dbxref=GeneID:1102388;Name=SC6F7.03;gbkey=Gene;gene=SC6F7.03;gene_biotype=protein_coding;gene_synonym=SC6F7.03;locus_tag=SCO6950
NC_003888.3	RefSeq	CDS	7713425	7714828	.	+	0	ID=cds6882;Parent=gene7011;Dbxref=Genbank:NP_631016.1,GeneID:1102388;Name=NP_631016.1;Note=SC6F7.03%2C unknown%2C len: 467 aa. Weakly similar to several including: Streptomyces coelicolor TR:Q9X7U7(EMBL:AL049863)  regulatory protein%2C SC5H1.40C (502 aa)%2C fasta scores opt: 315 z-score: 356.4 E(): 2.1e-12 26.4%25 identity in 488 aa overlap.;gbkey=CDS;gene=SC6F7.03;product=hypothetical protein;protein_id=NP_631016.1;transl_table=11
NC_003888.3	RefSeq	gene	7714825	7715706	.	+	.	ID=gene7012;Dbxref=GeneID:1102389;Name=SC6F7.04;gbkey=Gene;gene=SC6F7.04;gene_biotype=protein_coding;gene_synonym=SC6F7.04;locus_tag=SCO6951
NC_003888.3	RefSeq	CDS	7714825	7715706	.	+	0	ID=cds6883;Parent=gene7012;Dbxref=Genbank:NP_631017.1,GeneID:1102389;Name=NP_631017.1;Note=SC6F7.04%2C unknown%2C len: 293 aa. Similar to Streptomyces coelicolor TR:Q9ZEP2(EMBL:AJ131213) hypothetical 30.7 kd protein%2C SCE94.11C (277 aa)%2C fasta scores: opt: 214 z-score: 251.4 E(): 1.5e-06 26.6%25 identity in 286 aa overlap;gbkey=CDS;gene=SC6F7.04;product=hypothetical protein;protein_id=NP_631017.1;transl_table=11
NC_003888.3	RefSeq	gene	7715801	7716844	.	-	.	ID=gene7013;Dbxref=GeneID:1102390;Name=SC6F7.05c;gbkey=Gene;gene=SC6F7.05c;gene_biotype=protein_coding;gene_synonym=SC6F7.05c;locus_tag=SCO6952
NC_003888.3	RefSeq	CDS	7715801	7716844	.	-	0	ID=cds6884;Parent=gene7013;Dbxref=Genbank:NP_631018.1,GeneID:1102390;Name=NP_631018.1;Note=SC6F7.05c%2C unknown%2C len: 347 aa. Weakly similar to several proteins of unknown function e.g. Mycobacterium tuberculosis SW:Y07U_MYCTU(EMBL:Z75555) (273 aa)%2C fasta scores opt: 173 z-score: 212.9 E(): 0.0002 26.8%25 identity in 276 aa overlap.;gbkey=CDS;gene=SC6F7.05c;product=hypothetical protein;protein_id=NP_631018.1;transl_table=11
NC_003888.3	RefSeq	gene	7717864	7719441	.	-	.	ID=gene7014;Dbxref=GeneID:1102391;Name=SC6F7.06c;gbkey=Gene;gene=SC6F7.06c;gene_biotype=protein_coding;gene_synonym=SC6F7.06c;locus_tag=SCO6953
NC_003888.3	RefSeq	CDS	7717864	7719441	.	-	0	ID=cds6885;Parent=gene7014;Dbxref=Genbank:NP_631019.1,GeneID:1102391;Name=NP_631019.1;Note=SC6F7.06c%2C unknown%2C len: 525 aa%3B low similarity to Streptomyces coelicolor SCP1 plasmid borne TR:Q9ACU9 (EMBL:AL590464) Streptomyces coelicolor hypothetical protein SCP1.204c%2C 553 aa%3B fasta scores: opt: 617 Z-score: 687.1 E(): 1.2e-30%3B 29.916%25 identity in 478 aa overlap;gbkey=CDS;gene=SC6F7.06c;product=hypothetical protein;protein_id=NP_631019.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7719659	7719700	.	+	.	ID=id9036;Note=Right hand portion of tRNA interrupted by element insertion;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	7719717	7719735	.	+	.	ID=id9037;Note=inverted repeat shares 100 %25 identity with complement(7694..7712).;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	7719740	7719758	.	-	.	ID=id9038;Note=inverted repeat shares 100 %25 identity with 7671..7689.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7719817	7722720	.	+	.	ID=gene7015;Dbxref=GeneID:1102392;Name=SC6F7.07;gbkey=Gene;gene=SC6F7.07;gene_biotype=protein_coding;gene_synonym=SC6F7.07;locus_tag=SCO6954
NC_003888.3	RefSeq	CDS	7719817	7722720	.	+	0	ID=cds6886;Parent=gene7015;Dbxref=Genbank:NP_631020.1,GeneID:1102392;Name=NP_631020.1;Note=subunit A of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;gene=SC6F7.07;product=monovalent cation/H+ antiporter subunit A;protein_id=NP_631020.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7720189	7721067	.	+	.	ID=id9039;Dbxref=GeneID:1102392;Note=Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 236.30%2C E-value 4.4e-67;gbkey=misc_feature;gene=SC6F7.07
NC_003888.3	RefSeq	ribosome_entry_site	7722702	7722706	.	+	.	ID=id9040;Dbxref=GeneID:1102392;gbkey=RBS;gene=SC6F7.07
NC_003888.3	RefSeq	gene	7722717	7723481	.	+	.	ID=gene7016;Dbxref=GeneID:1102393;Name=SC6F7.08;gbkey=Gene;gene=SC6F7.08;gene_biotype=protein_coding;gene_synonym=SC6F7.08;locus_tag=SCO6955
NC_003888.3	RefSeq	CDS	7722717	7723481	.	+	0	ID=cds6887;Parent=gene7016;Dbxref=Genbank:NP_631021.1,GeneID:1102393;Name=NP_631021.1;Note=subunit C of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;gene=SC6F7.08;product=monovalent cation/H+ antiporter subunit C;protein_id=NP_631021.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7722723	7723049	.	+	.	ID=id9041;Dbxref=GeneID:1102393;Note=Pfam match to entry PF01898 DUF67%2C Protein of unknown function%2C score 64.10%2C E-value 2.9e-15;gbkey=misc_feature;gene=SC6F7.08
NC_003888.3	RefSeq	gene	7723478	7725217	.	+	.	ID=gene7017;Dbxref=GeneID:1102394;Name=SC6F7.09;gbkey=Gene;gene=SC6F7.09;gene_biotype=protein_coding;gene_synonym=SC6F7.09;locus_tag=SCO6956
NC_003888.3	RefSeq	CDS	7723478	7725217	.	+	0	ID=cds6888;Parent=gene7017;Dbxref=Genbank:NP_631022.1,GeneID:1102394;Name=NP_631022.1;Note=subunit D of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B contains an oxidoreductase domain%3B catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;gene=SC6F7.09;product=monovalent cation/H+ antiporter subunit D;protein_id=NP_631022.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7723868	7724737	.	+	.	ID=id9042;Dbxref=GeneID:1102394;Note=Pfam match to entry PF00361 oxidored_q1%2C NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 171.50%2C E-value 1.4e-47;gbkey=misc_feature;gene=SC6F7.09
NC_003888.3	RefSeq	repeat_region	7724887	7724978	.	+	.	ID=id9043;Dbxref=GeneID:1102394;Note=repeat region containing 3x CCGGCTCCGGAGAGGCGT repeats and a partial repeat sequence CCGGCTCCGG. This translates into a 3xGSGEAS repeat within the C-terminus of CDS SC6F7.09 a possible oxidoreductase.;gbkey=repeat_region;gene=SC6F7.09
NC_003888.3	RefSeq	gene	7725214	7725813	.	+	.	ID=gene7018;Dbxref=GeneID:1102395;Name=SC6F7.10;gbkey=Gene;gene=SC6F7.10;gene_biotype=protein_coding;gene_synonym=SC6F7.10;locus_tag=SCO6957
NC_003888.3	RefSeq	CDS	7725214	7725813	.	+	0	ID=cds6889;Parent=gene7018;Dbxref=Genbank:NP_631023.1,GeneID:1102395;Name=NP_631023.1;Note=subunit E of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B in S. meliloti it is known to be involved specifically with K+ transport;gbkey=CDS;gene=SC6F7.10;product=monovalent cation/H+ antiporter subunit E;protein_id=NP_631023.1;transl_table=11
NC_003888.3	RefSeq	gene	7725810	7726127	.	+	.	ID=gene7019;Dbxref=GeneID:1102396;Name=SC6F7.11;gbkey=Gene;gene=SC6F7.11;gene_biotype=protein_coding;gene_synonym=SC6F7.11;locus_tag=SCO6958
NC_003888.3	RefSeq	CDS	7725810	7726127	.	+	0	ID=cds6890;Parent=gene7019;Dbxref=Genbank:NP_631024.1,GeneID:1102396;Name=NP_631024.1;Note=SC6F7.11%2C possible membrane protein%2C len: 105 aa. Similar to two potassium-efflux system proteins from Rhizobium meliloti: TR:Q52983(EMBL:X93358) K-efflux system protein%2C PhaF (92 aa)%2C fasta scores opt: 160 z-score: 228.2 E(): 2.8e-05 34.9%25 identity in 86 aa overlap and SW:PHF2_RHIME(EMBL:L37353) PhaF2 (123 aa)%2C fasta scores opt: 166 z-score: 234.3 E(): 1.3e-05 37.5%25 identity in 96 aa overlap. Contains N-terminal membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6F7.11;product=hypothetical protein;protein_id=NP_631024.1;transl_table=11
NC_003888.3	RefSeq	gene	7726124	7726489	.	+	.	ID=gene7020;Dbxref=GeneID:1102397;Name=SC6F7.12;gbkey=Gene;gene=SC6F7.12;gene_biotype=protein_coding;gene_synonym=SC6F7.12;locus_tag=SCO6959
NC_003888.3	RefSeq	CDS	7726124	7726489	.	+	0	ID=cds6891;Parent=gene7020;Dbxref=Genbank:NP_631025.1,GeneID:1102397;Name=NP_631025.1;Note=subunit G of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B in S. meliloti it is known to be involved specifically with K+ transport;gbkey=CDS;gene=SC6F7.12;product=monovalent cation/H+ antiporter subunit G;protein_id=NP_631025.1;transl_table=11
NC_003888.3	RefSeq	gene	7726503	7727039	.	-	.	ID=gene7021;Dbxref=GeneID:1102398;Name=SC6F7.13c;gbkey=Gene;gene=SC6F7.13c;gene_biotype=protein_coding;gene_synonym=SC6F7.13c;locus_tag=SCO6960
NC_003888.3	RefSeq	CDS	7726503	7727039	.	-	0	ID=cds6892;Parent=gene7021;Dbxref=Genbank:NP_631026.1,GeneID:1102398;Name=NP_631026.1;Note=SC6F7.13c%2C unknown%2C len: 178 aa.;gbkey=CDS;gene=SC6F7.13c;product=hypothetical protein;protein_id=NP_631026.1;transl_table=11
NC_003888.3	RefSeq	gene	7727111	7728259	.	-	.	ID=gene7022;Dbxref=GeneID:1102399;Name=SC6F7.14c;gbkey=Gene;gene=SC6F7.14c;gene_biotype=protein_coding;gene_synonym=SC6F7.14c;locus_tag=SCO6961
NC_003888.3	RefSeq	CDS	7727111	7728259	.	-	0	ID=cds6893;Parent=gene7022;Dbxref=Genbank:NP_631027.1,GeneID:1102399;Name=NP_631027.1;Note=SC6F7.14c%2C unknown%2C len: 382 aa. Similar to several proteins of undefined function e.g. Streptomyces coelicolor TR:Q9XAC4 (EMBL:AL096839) SCC22.14C (368 aa)%2C fasta scores opt: 945 z-score: 1101.8 E():0 47.7%25 identity in 369 aa overlap.;gbkey=CDS;gene=SC6F7.14c;product=hypothetical protein;protein_id=NP_631027.1;transl_table=11
NC_003888.3	RefSeq	gene	7728261	7729661	.	-	.	ID=gene7023;Dbxref=GeneID:1102400;Name=SC6F7.15c;gbkey=Gene;gene=SC6F7.15c;gene_biotype=protein_coding;gene_synonym=SC6F7.15c;locus_tag=SCO6962
NC_003888.3	RefSeq	CDS	7728261	7729661	.	-	0	ID=cds6894;Parent=gene7023;Dbxref=Genbank:NP_631028.1,GeneID:1102400;Name=NP_631028.1;Note=SC6F7.15c%2C possible glutamine synthetase (EC 6.3.1.2)%2C len: 466 aa. Similar to many glutamine synthetases e.g. Bacillus subtilis SW:GLNA_BACSU(EMBL:M22811) GlnA (443 aa)%2C fasta scores opt: 540 z-score: 593.0 E(): 1.4e-25 28.5%25 identity in 421 aa overlap. Contains a Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase;gbkey=CDS;gene=SC6F7.15c;product=glutamine synthetase;protein_id=NP_631028.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7728732	7729109	.	-	.	ID=id9044;Dbxref=GeneID:1102400;Note=Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase%2C score 52.30%2C E-value 4.2e-16;gbkey=misc_feature;gene=SC6F7.15c
NC_003888.3	RefSeq	gene	7729774	7730619	.	-	.	ID=gene7024;Dbxref=GeneID:1102401;Name=SC6F7.16c;gbkey=Gene;gene=SC6F7.16c;gene_biotype=protein_coding;gene_synonym=SC6F7.16c;locus_tag=SCO6963
NC_003888.3	RefSeq	CDS	7729774	7730619	.	-	0	ID=cds6895;Parent=gene7024;Dbxref=Genbank:NP_631029.1,GeneID:1102401;Name=NP_631029.1;Note=SC6F7.16c%2C possible lipoprotein%2C len: 281 aa. Weakly similar to Streptomyces coelicolor TR:Q54398 (EMBL:L42758) proteinase%2C SlpD or SCH5.02C (539 aa)%2C fasta scores opt: 137 z-score: 151.5 E(): 0.54 29.5%25 identity in 295 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC6F7.16c;product=lipoprotein;protein_id=NP_631029.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7730539	7730571	.	-	.	ID=id9045;Dbxref=GeneID:1102401;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6F7.16c
NC_003888.3	RefSeq	repeat_region	7730700	7730931	.	+	.	ID=id9046;Note=degenerate repeat region containing 16xCCGGG(T/A/C)(G/C) and 6xGGGC(G/C)GGA direct repeats.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7730937	7731587	.	-	.	ID=gene7025;Dbxref=GeneID:1102402;Name=SC6F7.17c;gbkey=Gene;gene=SC6F7.17c;gene_biotype=protein_coding;gene_synonym=SC6F7.17c;locus_tag=SCO6964
NC_003888.3	RefSeq	CDS	7730937	7731587	.	-	0	ID=cds6896;Parent=gene7025;Dbxref=Genbank:NP_631030.1,GeneID:1102402;Name=NP_631030.1;Note=SC6F7.17c%2C unknown%2C len: 216 aa. Similar to Mycobacterium tuberculosis TR:P95145(EMBL:Z83859) hypothetical 23.1 kd protein (211 aa)%2C fasta scores opt: 519 z-score: 613.8 E(): 9.4e-27 46.6%25 identity in 193 aa overlap;gbkey=CDS;gene=SC6F7.17c;product=hypothetical protein;protein_id=NP_631030.1;transl_table=11
NC_003888.3	RefSeq	gene	7731590	7731922	.	-	.	ID=gene7026;Dbxref=GeneID:1102403;Name=SC6F7.18c;gbkey=Gene;gene=SC6F7.18c;gene_biotype=protein_coding;gene_synonym=SC6F7.18c;locus_tag=SCO6965
NC_003888.3	RefSeq	CDS	7731590	7731922	.	-	0	ID=cds6897;Parent=gene7026;Dbxref=Genbank:NP_631031.1,GeneID:1102403;Name=NP_631031.1;Note=SC6F7.18c%2C unknown%2C len: 110 aa. Similar to Streptomyces coelicolor TR:Q9XA81(EMBL:AL096837) possible DNA-binding protein%2C SCF43A.34C (113 aa)%2C fasta scores opt: 235 z-score: 310.8 E(): 7.5e-10 40.4%25 identity in 109 aa overlap.;gbkey=CDS;gene=SC6F7.18c;product=hypothetical protein;protein_id=NP_631031.1;transl_table=11
NC_003888.3	RefSeq	gene	7732266	7733075	.	-	.	ID=gene7027;Dbxref=GeneID:1102404;Name=SC6F7.19c;gbkey=Gene;gene=SC6F7.19c;gene_biotype=protein_coding;gene_synonym=SC6F7.19c;locus_tag=SCO6966
NC_003888.3	RefSeq	CDS	7732266	7733075	.	-	0	ID=cds6898;Parent=gene7027;Dbxref=Genbank:NP_631032.1,GeneID:1102404;Name=NP_631032.1;Note=SC6F7.19c%2C possible lipase%2C len: 269 aa. Similar to many other lipases e.g. Thermotoga maritima TR:Q9X171(EMBL:AE001789) lipase%2C (259 aa)%2C fasta scores opt: 345 z-score: 396.1 E(): 1.3e-14 33.1%25 identity in 239 aa overlap. contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SC6F7.19c;product=lipase;protein_id=NP_631032.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7732287	7732913	.	-	.	ID=id9047;Dbxref=GeneID:1102404;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 56.50%2C E-value 5.7e-13;gbkey=misc_feature;gene=SC6F7.19c
NC_003888.3	RefSeq	ribosome_entry_site	7733080	7733084	.	-	.	ID=id9048;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7733243	7733247	.	+	.	ID=id9049;gbkey=RBS
NC_003888.3	RefSeq	gene	7733254	7734441	.	+	.	ID=gene7028;Dbxref=GeneID:1102405;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;gene_synonym=pcaF;locus_tag=SCO6967
NC_003888.3	RefSeq	CDS	7733254	7734441	.	+	0	ID=cds6899;Parent=gene7028;Dbxref=Genbank:NP_631033.1,GeneID:1102405;Name=NP_631033.1;Note=SC6F7.20%2C pcaF%2C beta-ketoadipyl-CoA thiolase%2C len: 395 aa. Highly similar to many including: Pseudomonas putida SW:PCAF_PSEPU(EMBL:U10895) beta-ketoadipyl CoA thiolase (EC 2.3.1.-) (400 aa)%2C fasta scores opt: 1352 z-score: 1491.2 E(): 0 53.9%25 identity in 399 aa overlap and Streptomyces coelicolor TR:Q9XAM9(EMBL:AL079355) beta-ketoadipyl-CoA thiolase%2C SC4C6.11C (400 aa)%2C fasta scores opt: 1450 z-score: 1598.9 E(): 0 56.9%25 identity in 401 aa overlap. Contains a Pfam match to entry PF00108 thiolase%2C Thiolase and Prosite hits to PS00098 Thiolases acyl-enzyme intermediate signature%2C PS00737 Thiolases signature 2 and PS00099 Thiolases active site.;gbkey=CDS;gene=pcaF;product=beta-ketoadipyl-CoA thiolase;protein_id=NP_631033.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7733254	7734438	.	+	.	ID=id9050;Dbxref=GeneID:1102405;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2C score 606.60%2C E-value 1.5e-178;gbkey=misc_feature;gene=pcaF
NC_003888.3	RefSeq	sequence_feature	7733509	7733565	.	+	.	ID=id9051;Dbxref=GeneID:1102405;Note=PS00098 Thiolases acyl-enzyme intermediate signature;gbkey=misc_feature;gene=pcaF
NC_003888.3	RefSeq	sequence_feature	7734274	7734324	.	+	.	ID=id9052;Dbxref=GeneID:1102405;Note=PS00737 Thiolases signature 2;gbkey=misc_feature;gene=pcaF
NC_003888.3	RefSeq	sequence_feature	7734379	7734420	.	+	.	ID=id9053;Dbxref=GeneID:1102405;Note=PS00099 Thiolases active site;gbkey=misc_feature;gene=pcaF
NC_003888.3	RefSeq	gene	7734509	7736044	.	+	.	ID=gene7029;Dbxref=GeneID:1102406;Name=SC6F7.21;gbkey=Gene;gene=SC6F7.21;gene_biotype=protein_coding;gene_synonym=SC6F7.21;locus_tag=SCO6968
NC_003888.3	RefSeq	CDS	7734509	7736044	.	+	0	ID=cds6900;Parent=gene7029;Dbxref=Genbank:NP_631034.1,GeneID:1102406;Name=NP_631034.1;Note=SC6F7.21%2C probable long-chain-fatty-acid-CoA ligase%2C len: 511 aa. Similar to several including: Bacillus subtilis SW:LCFA_BACSU (EMBL:Z75208) long-chain-fatty-acid-CoA ligase (EC 6.2.1.3) (560 aa)%2C fasta scores opt: 877 z-score: 981.0 E():0 35.4%25 identity in 534 aa overlap and Archaeoglobus fulgidus TR:O28502 (EMBL:AE000980) long-chain-fatty-acid-CoA ligase (569 aa)%2C fasta scores opt: 971 z-score: 1085.9 E():0 38.1%25 identity in 525 aa overlap. Contains a Prosite hit to PS00455  AMP-binding domain signature and a Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme.;gbkey=CDS;gene=SC6F7.21;product=long-chain-fatty-acid-CoA ligase;protein_id=NP_631034.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7734599	7735801	.	+	.	ID=id9054;Dbxref=GeneID:1102406;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 197.40%2C E-value 2.2e-55;gbkey=misc_feature;gene=SC6F7.21
NC_003888.3	RefSeq	sequence_feature	7734977	7735012	.	+	.	ID=id9055;Dbxref=GeneID:1102406;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC6F7.21
NC_003888.3	RefSeq	gene	7736107	7736880	.	+	.	ID=gene7030;Dbxref=GeneID:1102407;Name=SC6F7.22;gbkey=Gene;gene=SC6F7.22;gene_biotype=protein_coding;gene_synonym=SC6F7.22;locus_tag=SCO6969
NC_003888.3	RefSeq	CDS	7736107	7736880	.	+	0	ID=cds6901;Parent=gene7030;Dbxref=Genbank:NP_631035.1,GeneID:1102407;Name=NP_631035.1;Note=SC6F7.22%2C possible integral membrane protein%2C len: 257 aa. Similar to several proteins of undefined function e.g. Campylobacter jejuni TR:CAB73891(EMBL:AL139078) integral membrane protein (254 aa)%2C fasta scores opt: 176 z-score: 216.1 E(): 0.00013 24.4%25 identity in 254 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6F7.22;product=hypothetical protein;protein_id=NP_631035.1;transl_table=11
NC_003888.3	RefSeq	gene	7736807	7738951	.	-	.	ID=gene7031;Dbxref=GeneID:1102408;Name=SC6F7.23c;gbkey=Gene;gene=SC6F7.23c;gene_biotype=protein_coding;gene_synonym=SC6F7.23c;locus_tag=SCO6970
NC_003888.3	RefSeq	CDS	7736807	7738951	.	-	0	ID=cds6902;Parent=gene7031;Dbxref=Genbank:NP_631036.1,GeneID:1102408;Name=NP_631036.1;Note=SC6F7.23c. possible membrane transport protein%2C len: 714 aa. Similar to many including: Bacillus subtilis TR:P96712(EMBL:D50098) multi drug transporter Bmr3 (512 aa)%2C fasta scores opt: 1027 z-score: 1100.4 E():0 34.5%25 identity in 498 aa overlap. Also similar to several from Streptomyces coelicolor e.g. TR:Q9ZBJ1(EMBL:AL035161) efflux protein%2C SC9C7.19 (815 aa)%2C fasta scores opt: 1639 z-score: 1751.6 E():0 49.4%25 identity in 530 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6F7.23c;product=membrane transport protein;protein_id=NP_631036.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7737509	7738855	.	-	.	ID=id9056;Dbxref=GeneID:1102408;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -63.40%2C E-value 0.00014;gbkey=misc_feature;gene=SC6F7.23c
NC_003888.3	RefSeq	gene	7739022	7739795	.	-	.	ID=gene7032;Dbxref=GeneID:1102409;Name=SC6F7.24c;gbkey=Gene;gene=SC6F7.24c;gene_biotype=protein_coding;gene_synonym=SC6F7.24c;locus_tag=SCO6971
NC_003888.3	RefSeq	CDS	7739022	7739795	.	-	0	ID=cds6903;Parent=gene7032;Dbxref=Genbank:NP_631037.1,GeneID:1102409;Name=NP_631037.1;Note=catalyzes the formation of precorrin 6x from precorrin 5;gbkey=CDS;gene=SC6F7.24c;product=precorrin 6A synthase;protein_id=NP_631037.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7739079	7739780	.	-	.	ID=id9057;Dbxref=GeneID:1102409;Note=Pfam match to entry PF00590 TP_methylase%2C Tetrapyrrole (Corrin/Porphyrin) Methylases.%2C score 65.40%2C E-value 1.2e-15;gbkey=misc_feature;gene=SC6F7.24c
NC_003888.3	RefSeq	gene	7739853	7740392	.	-	.	ID=gene7033;Dbxref=GeneID:1102410;Name=SC6F7.25c.;gbkey=Gene;gene=SC6F7.25c.;gene_biotype=protein_coding;gene_synonym=SC6F7.25c.;locus_tag=SCO6972
NC_003888.3	RefSeq	CDS	7739853	7740392	.	-	0	ID=cds6904;Parent=gene7033;Dbxref=Genbank:NP_631038.1,GeneID:1102410;Name=NP_631038.1;Note=SC6F7.25c%2C unknown%2C len: 179 aa.;gbkey=CDS;gene=SC6F7.25c.;product=hypothetical protein;protein_id=NP_631038.1;transl_table=11
NC_003888.3	RefSeq	gene	7740493	7740566	.	+	.	ID=gene7034;Dbxref=GeneID:3240067;Name=SCOt64;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt64
NC_003888.3	RefSeq	tRNA	7740493	7740566	.	+	.	ID=rna84;Parent=gene7034;Dbxref=GeneID:3240067;Note=tRNA Pro anticodon GGG%2C Cove score 78.36;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	exon	7740493	7740566	.	+	.	ID=id9058;Parent=rna84;Dbxref=GeneID:3240067;Note=tRNA Pro anticodon GGG%2C Cove score 78.36;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	stem_loop	7740573	7740610	.	-	.	ID=id9059;Note=possible stem loop with 100 %25 matches over 17 bases and a loop of 4 bases;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7740635	7741057	.	-	.	ID=gene7035;Dbxref=GeneID:1102411;Name=SC6F7.26c;gbkey=Gene;gene=SC6F7.26c;gene_biotype=protein_coding;gene_synonym=SC6F7.26c;locus_tag=SCO6973
NC_003888.3	RefSeq	CDS	7740635	7741057	.	-	0	ID=cds6905;Parent=gene7035;Dbxref=Genbank:NP_631039.1,GeneID:1102411;Name=NP_631039.1;Note=SC6F7.26c%2C unknown%2C len: 140 aa. Similar%2C in parts%2C to proteins containing the principally Eukaryotic ankyrin repeat motifs e.g. Chromatium vinosum SW:ANKH_CHRVI(EMBL:L13419) ankyrin homolog precursor (323 aa)%2C fasta scores opt: 200 z-score: 247.0 E(): 2.5e-06 38.4%25 identity in 125 aa overlap. Contains 2xPfam matches to entry PF00023 ank%2C Ank repeat.;gbkey=CDS;gene=SC6F7.26c;product=hypothetical protein;protein_id=NP_631039.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7740734	7740832	.	-	.	ID=id9060;Dbxref=GeneID:1102411;Note=Pfam match to entry PF00023 ank%2C Ank repeat%2C score 24.50%2C E-value 0.0025;gbkey=misc_feature;gene=SC6F7.26c
NC_003888.3	RefSeq	sequence_feature	7740839	7740937	.	-	.	ID=id9061;Dbxref=GeneID:1102411;Note=Pfam match to entry PF00023 ank%2C Ank repeat%2C score 20.90%2C E-value 0.029;gbkey=misc_feature;gene=SC6F7.26c
NC_003888.3	RefSeq	gene	7741171	7741956	.	-	.	ID=gene7036;Dbxref=GeneID:1102412;Name=SC6F7.27c;gbkey=Gene;gene=SC6F7.27c;gene_biotype=protein_coding;gene_synonym=SC6F7.27c;locus_tag=SCO6974
NC_003888.3	RefSeq	CDS	7741171	7741956	.	-	0	ID=cds6906;Parent=gene7036;Dbxref=Genbank:NP_631040.1,GeneID:1102412;Name=NP_631040.1;Note=SC6F7.27c%2C possible GntR-family regulatory protein%2C len: 261 aa. Similar to many regulators e.g. Escherichia coli SW:FARR_ECOLI (EMBL:X15790) fatty acyl responsive regulator (P30 protein) FarR (240 aa)%2C fasta scores opt: 260 z-score: 313.4 E(): 5.1e-10 26.1%25 identity in 226 aa overlap and Streptomyces coelicolor TR:CAB60175 (EMBL:AL132824)  transcriptional regulator%2C SCAH10.21 (245 aa)%2C fasta scores opt: 1194 z-score: 1406.5 E():0 74.5%25 identity in 243 aa overlap. Contains a Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family with the helix-turn-helix motif situated between residues 55..76 (+4.16 SD).;gbkey=CDS;gene=SC6F7.27c;product=GntR family transcriptional regulator;protein_id=NP_631040.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7741675	7741854	.	-	.	ID=id9062;Dbxref=GeneID:1102412;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 54.20%2C E-value 3.4e-15;gbkey=misc_feature;gene=SC6F7.27c
NC_003888.3	RefSeq	gene	7742010	7743884	.	-	.	ID=gene7037;Dbxref=GeneID:1102413;Name=SC6F7.28c;gbkey=Gene;gene=SC6F7.28c;gene_biotype=protein_coding;gene_synonym=SC6F7.28c,SC8F11.01c;locus_tag=SCO6975
NC_003888.3	RefSeq	CDS	7742010	7743884	.	-	0	ID=cds6907;Parent=gene7037;Dbxref=Genbank:NP_733719.1,GeneID:1102413;Name=NP_733719.1;Note=SC8F11.01c%2C possible amino acid synthase%2C partial CDS%2C len: > 237 aa. Similar to several enzymes requiring TPP as a cofactor including: Spirulina platensis SW:ILVB_SPIPL(EMBL:M75907) acetolactate synthase (EC 4.1.3.18) IlvY (579 aa)%2C fasta scores opt: 166 z-score: 195.5 E(): 0.0019 27.7%25 identity in 238 aa overlap. Also highly similar%2C in parts%2C to the Bacillus subtilis SW:IOLD_BACSU(EMBL:D14399) hypothetical protein%2C IolD found within the inositol utilisation operon (580 aa)%2C fasta scores opt: 577 z-score: 669.1 E(): 7.7e-30 47.2%25 identity in 178 aa overlap. Contains a Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes.~SC6F7.28c%2C probable acetolactate synthase%2C partial CDS%2C len: > 420 aa. Similar to many acetolactate synthases including: Mycobacterium tuberculosis SW:ILVB_MYCTU(EMBL:Z78020) probable acetolactate synthase (EC 4.1.3.18) (547 aa)%2C fasta scores opt: 492 z-score: 552.0 E(): 2.6e-23 29.1%25 identity in 388 aa overlap. Also similar to Bacillus subtilis SW:IOLD_BACSU(EMBL:D14399) myo-inositol catabolic protein IolD (580 aa)%2C fasta scores opt: 408 z-score: 458.5 E(): 4.3e-18 34.8%25 identity in 443 aa overlap. Contains a Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes.;gbkey=CDS;gene=SC6F7.28c;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=NP_733719.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7742151	7743242	.	-	.	ID=id9063;Dbxref=GeneID:1102413;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes%2C score 195.90%2C E-value 2.8e-60;gbkey=misc_feature;gene=SC6F7.28c
NC_003888.3	RefSeq	sequence_feature	7743174	7743620	.	-	.	ID=id9064;Dbxref=GeneID:1102413;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes%2C score 41.10%2C E-value 3.7e-12;gbkey=misc_feature;gene=SC6F7.28c
NC_003888.3	RefSeq	sequence_feature	7743174	7743272	.	+	.	ID=id9065;Note=495 (+1) 1 99 St8F11;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7743881	7744777	.	-	.	ID=gene7038;Dbxref=GeneID:1102414;Name=SC8F11.02c;gbkey=Gene;gene=SC8F11.02c;gene_biotype=protein_coding;gene_synonym=SC8F11.02c;locus_tag=SCO6976
NC_003888.3	RefSeq	CDS	7743881	7744777	.	-	0	ID=cds6908;Parent=gene7038;Dbxref=Genbank:NP_631041.1,GeneID:1102414;Name=NP_631041.1;Note=SC8F11.02c%2C unknown%2C len: 298 aa. Similar to the Bacillus subtilis SW:IOLB_BACSU(EMBL:D14399) hypothetical protein%2C IolB%2C found within the inositol utilisation operon (271 aa)%2C fasta scores opt: 443 z-score: 516.6 E(): 2.4e-21 34.9%25 identity in 281 aa overlap;gbkey=CDS;gene=SC8F11.02c;product=5-deoxy-glucuronate isomerase;protein_id=NP_631041.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7744786	7744790	.	-	.	ID=id9066;gbkey=RBS
NC_003888.3	RefSeq	gene	7744831	7745727	.	-	.	ID=gene7039;Dbxref=GeneID:1102415;Name=SC8F11.03c;gbkey=Gene;gene=SC8F11.03c;gene_biotype=protein_coding;gene_synonym=SC8F11.03c;locus_tag=SCO6977
NC_003888.3	RefSeq	CDS	7744831	7745727	.	-	0	ID=cds6909;Parent=gene7039;Dbxref=Genbank:NP_631042.1,GeneID:1102415;Name=NP_631042.1;Note=SC8F11.03c%2C unknown%2C len: 298 aa. weakly similar to Streptomyces coelicolor TR:CAB59608 (EMBL:AL132662) histidine kinase%2C SCF11.31C (442 aa)%2C fasta scores opt: 131 z-score: 160.7 E(): 0.16 30.2%25 identity in 265 aa overlap.;gbkey=CDS;gene=SC8F11.03c;product=hypothetical protein;protein_id=NP_631042.1;transl_table=11
NC_003888.3	RefSeq	gene	7745741	7746703	.	-	.	ID=gene7040;Dbxref=GeneID:1102416;Name=SC8F11.04c;gbkey=Gene;gene=SC8F11.04c;gene_biotype=protein_coding;gene_synonym=SC8F11.04c;locus_tag=SCO6978
NC_003888.3	RefSeq	CDS	7745741	7746703	.	-	0	ID=cds6910;Parent=gene7040;Dbxref=Genbank:NP_631043.1,GeneID:1102416;Name=NP_631043.1;Note=SC8F11.04c%2C possible carbohydrate kinase%2C len: 320 aa. Similar to many fructokinases (EC 2.7.1.4) including: Klebsiella pneumoniae SW:SCRK_KLEPN (EMBL:X61004) ScrK (307 aa)%2C fasta scores opt: 378 z-score: 438.7 E(): 5.3e-17 32.8%25 identity in 311 aa overlap. Also similar to Bacillus subtilis SW:IOLC_BACSU(EMBL:D14399) hypothetical protein%2C IolC%2C found within the inositol utilisation operon (325 aa)%2C fasta scores opt: 583 z-score: 672.7 E(): 4.9e-30 30.0%25 identity in 313 aa overlap. Contains a Prosite hit to PS00583 pfkB family of carbohydrate kinases signature 1 and a Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase.;gbkey=CDS;gene=SC8F11.04c;product=5-dehydro-2-deoxygluconokinase;protein_id=NP_631043.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7745894	7746586	.	-	.	ID=id9067;Dbxref=GeneID:1102416;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 97.80%2C E-value 9.1e-30;gbkey=misc_feature;gene=SC8F11.04c
NC_003888.3	RefSeq	sequence_feature	7746512	7746586	.	-	.	ID=id9068;Dbxref=GeneID:1102416;Note=PS00583 pfkB family of carbohydrate kinases signature 1;gbkey=misc_feature;gene=SC8F11.04c
NC_003888.3	RefSeq	repeat_region	7746887	7746912	.	+	.	ID=id9069;Note=repeat region containing 2xTCGGGTCTGGCAC direct repeats.;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	7746942	7746947	.	+	.	ID=id9070;gbkey=RBS
NC_003888.3	RefSeq	gene	7746957	7747979	.	+	.	ID=gene7041;Dbxref=GeneID:1102417;Name=SC8F11.05;gbkey=Gene;gene=SC8F11.05;gene_biotype=protein_coding;gene_synonym=SC8F11.05;locus_tag=SCO6979
NC_003888.3	RefSeq	CDS	7746957	7747979	.	+	0	ID=cds6911;Parent=gene7041;Dbxref=Genbank:NP_631044.1,GeneID:1102417;Name=NP_631044.1;Note=SC8F11.05%2C probable solute-binding lipoprotein%2C len: 340 aa. Highly similar to many sugar transport proteins including Bacillus subtilis SW:RBSB_BACSU(EMBL:Z92953) D-ribose-binding protein precursor%2C RbsB (305 aa)%2C fasta scores opt: 222 z-score: 243.9 E(): 3.7e-06 23.0%25 identity in 256 aa overlap and several examples from Streptomyces coelicolor e.g. TR:Q9X837(EMBL:AL049727)  solute binding protein%2C SC9B1.17C (337 aa)%2C fasta scores opt: 1281 z-score: 1360.6 E():0 59.1%25 identity in 328 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC8F11.05;product=solute-binding lipoprotein;protein_id=NP_631044.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7747011	7747043	.	+	.	ID=id9071;Dbxref=GeneID:1102417;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC8F11.05
NC_003888.3	RefSeq	gene	7747976	7749055	.	+	.	ID=gene7042;Dbxref=GeneID:1102418;Name=SC8F11.06;gbkey=Gene;gene=SC8F11.06;gene_biotype=protein_coding;gene_synonym=SC8F11.06;locus_tag=SCO6980
NC_003888.3	RefSeq	CDS	7747976	7749055	.	+	0	ID=cds6912;Parent=gene7042;Dbxref=Genbank:NP_631045.1,GeneID:1102418;Name=NP_631045.1;Note=SC8F11.06%2C probable ABC transporter%2C membrane component%2C len: 359 aa. Similar to several including: Escherichia coli SW:MGLC_ECOLI(EMBL:M59444) galactoside transport system permease%2C MglC (336 aa)%2C fasta scores opt: 455 z-score: 517.3 E(): 2.2e-21 29.2%25 identity in 329 aa overlap and several examples from Streptomyces coelicolor e.g. TR:CAB60177(EMBL:AL132824) ABC transport system sugar permease%2C SCAH10.23 (346 aa)%2C fasta scores opt: 1426 z-score: 1605.5 E():0 62.2%25 identity in 336 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8F11.06;product=ABC transporter membrane protein;protein_id=NP_631045.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7749048	7749057	.	+	.	ID=id9072;gbkey=RBS
NC_003888.3	RefSeq	gene	7749062	7750054	.	+	.	ID=gene7043;Dbxref=GeneID:1102419;Name=SC8F11.07;gbkey=Gene;gene=SC8F11.07;gene_biotype=protein_coding;gene_synonym=SC8F11.07;locus_tag=SCO6981
NC_003888.3	RefSeq	CDS	7749062	7750054	.	+	0	ID=cds6913;Parent=gene7043;Dbxref=Genbank:NP_631046.1,GeneID:1102419;Name=NP_631046.1;gbkey=CDS;gene=SC8F11.07;product=ABC transporter ATP-binding protein;protein_id=NP_631046.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7749218	7749793	.	+	.	ID=id9073;Dbxref=GeneID:1102419;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 164.20%2C E-value 2.2e-45;gbkey=misc_feature;gene=SC8F11.07
NC_003888.3	RefSeq	sequence_feature	7749239	7749262	.	+	.	ID=id9074;Dbxref=GeneID:1102419;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8F11.07
NC_003888.3	RefSeq	sequence_feature	7749566	7749610	.	+	.	ID=id9075;Dbxref=GeneID:1102419;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC8F11.07
NC_003888.3	RefSeq	gene	7750057	7750959	.	+	.	ID=gene7044;Dbxref=GeneID:1102420;Name=SC8F11.08;gbkey=Gene;gene=SC8F11.08;gene_biotype=protein_coding;gene_synonym=SC8F11.08;locus_tag=SCO6982
NC_003888.3	RefSeq	CDS	7750057	7750959	.	+	0	ID=cds6914;Parent=gene7044;Dbxref=Genbank:NP_631047.1,GeneID:1102420;Name=NP_631047.1;Note=SC8F11.08%2C unknown%2C len:300 aa. Similar to a protein of undefined function involved in rhizopine catabolism in Rhizobium meliloti SW:MOCC_RHIME(EMBL:X78503) MocC (325 aa)%2C fasta scores opt: 390 z-score: 432.2 E(): 1.2e-16 29.8%25 identity in 289 aa overlap. Also similar to Bacillus subtilis SW:IOLE_BACSU(EMBL:D14399) IolE%2C found within the inositol utilisation operon (297 aa)%2C fasta scores opt: 313 z-score: 348.9 E(): 5.3e-12 26.3%25 identity in 293 aa overlap.;gbkey=CDS;gene=SC8F11.08;product=hypothetical protein;protein_id=NP_631047.1;transl_table=11
NC_003888.3	RefSeq	gene	7751075	7751488	.	+	.	ID=gene7045;Dbxref=GeneID:1102421;Name=SC8F11.09;gbkey=Gene;gene=SC8F11.09;gene_biotype=protein_coding;gene_synonym=SC8F11.09;locus_tag=SCO6983
NC_003888.3	RefSeq	CDS	7751075	7751488	.	+	0	ID=cds6915;Parent=gene7045;Dbxref=Genbank:NP_631048.1,GeneID:1102421;Name=NP_631048.1;Note=SC8F11.09%2C unknown%2C len: 137 aa. Weakly similar to a protein of undefined function from Mycobacterium tuberculosis SW:Y887_MYCTU(EMBL:Z73101) (152 aa)%2C fasta scores opt: 193 z-score: 239.5 E(): 6.6e-06 31.7%25 identity in 139 aa overlap.;gbkey=CDS;gene=SC8F11.09;product=hypothetical protein;protein_id=NP_631048.1;transl_table=11
NC_003888.3	RefSeq	gene	7751527	7752603	.	-	.	ID=gene7046;Dbxref=GeneID:1102422;Name=SC8F11.10c;gbkey=Gene;gene=SC8F11.10c;gene_biotype=protein_coding;gene_synonym=SC8F11.10c;locus_tag=SCO6984
NC_003888.3	RefSeq	CDS	7751527	7752603	.	-	0	ID=cds6916;Parent=gene7046;Dbxref=Genbank:NP_631049.1,GeneID:1102422;Name=NP_631049.1;Note=SC8F11.10c%2C possible oxidoreductase%2C len: 358 aa. Similar to many including: Sinorhizobium meliloti TR:O68965(EMBL:) myo-inositol dehydrogenase (EC 1.1.1.18) IdhA (330 aa)%2C fasta scores opt: 715 z-score: 789.8 E(): 0 39.6%25 identity in 338 aa overlap and Streptomyces coelicolor TR:CAB60174(EMBL:AL132824) dehydrogenase%2C SCAH10.20C (337 aa)%2C fasta scores opt: 1068 z-score: 1176.0 E(): 0 50.8%25 identity in 333 aa overlap. Note codon 25 offers an alternative translational start site. Contains a Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=SC8F11.10c;product=oxidoreductase;protein_id=NP_631049.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7751812	7752531	.	-	.	ID=id9076;Dbxref=GeneID:1102422;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 174.80%2C E-value 1.4e-48;gbkey=misc_feature;gene=SC8F11.10c
NC_003888.3	RefSeq	gene	7752600	7753763	.	-	.	ID=gene7047;Dbxref=GeneID:1102423;Name=SC8F11.11c;gbkey=Gene;gene=SC8F11.11c;gene_biotype=protein_coding;gene_synonym=SC8F11.11c;locus_tag=SCO6985
NC_003888.3	RefSeq	CDS	7752600	7753763	.	-	0	ID=cds6917;Parent=gene7047;Dbxref=Genbank:NP_631050.1,GeneID:1102423;Name=NP_631050.1;Note=SC8F11.11c%2C unknown%2C len: 387 aa.;gbkey=CDS;gene=SC8F11.11c;product=hypothetical protein;protein_id=NP_631050.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7753769	7753775	.	-	.	ID=id9077;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7753882	7753886	.	+	.	ID=id9078;gbkey=RBS
NC_003888.3	RefSeq	gene	7753893	7754939	.	+	.	ID=gene7048;Dbxref=GeneID:1102424;Name=SC8F11.12;gbkey=Gene;gene=SC8F11.12;gene_biotype=protein_coding;gene_synonym=SC8F11.12;locus_tag=SCO6986
NC_003888.3	RefSeq	CDS	7753893	7754939	.	+	0	ID=cds6918;Parent=gene7048;Dbxref=Genbank:NP_631051.1,GeneID:1102424;Name=NP_631051.1;Note=SC8F11.12%2C possible DNA-binding protein%2C len: 348 aa. Weakly similar to a hypothetical protein located on the Agrobacterium tumefaciens Ti-plasmid TR:BAA87720 (EMBL:AB016260) TiORF95 (336 aa)%2C fasta scores opt: 464 z-score: 513.2 E(): 3.7e-21 29.8%25 identity in 329 aa overlap and to TR:CAC46423 (EMBL:AL591788) Rhizobium meliloti hypothetical transcription regulator protein SMC00163%2C 340 aa%3B fasta scores: opt: 1133 Z-score: 1207.2 E(): 1.3e-59%3B 52.959%25 identity in 338 aa overlap. Contains a helix-turn-helix motif situated between residues 5..26 (+5.89 SD);gbkey=CDS;gene=SC8F11.12;product=DNA-binding protein;protein_id=NP_631051.1;transl_table=11
NC_003888.3	RefSeq	gene	7755003	7755470	.	+	.	ID=gene7049;Dbxref=GeneID:1102425;Name=SC8F11.13;gbkey=Gene;gene=SC8F11.13;gene_biotype=protein_coding;gene_synonym=SC8F11.13;locus_tag=SCO6987
NC_003888.3	RefSeq	CDS	7755003	7755470	.	+	0	ID=cds6919;Parent=gene7049;Dbxref=Genbank:NP_631052.1,GeneID:1102425;Name=NP_631052.1;Note=SC8F11.13%2C membrane protein%2C len: 85 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8F11.13;product=hypothetical protein;protein_id=NP_631052.1;transl_table=11
NC_003888.3	RefSeq	gene	7755621	7756784	.	-	.	ID=gene7050;Dbxref=GeneID:1102426;Name=SC8F11.14c;gbkey=Gene;gene=SC8F11.14c;gene_biotype=protein_coding;gene_synonym=SC8F11.14c;locus_tag=SCO6988
NC_003888.3	RefSeq	CDS	7755621	7756784	.	-	0	ID=cds6920;Parent=gene7050;Dbxref=Genbank:NP_631053.1,GeneID:1102426;Name=NP_631053.1;Note=SC8F11.14c%2C possible oxidoreductase%2C len: 387 aa. Similar to several including: Sinorhizobium meliloti TR:O68965(EMBL:) myo-inositol dehydrogenase (EC 1.1.1.18) IdhA (330 aa)%2C fasta scores opt: 287 z-score: 332.8 E(): 4.2e-11 30.1%25 identity in 356 aa overlap and Streptomyces coelicolor TR:O69945(EMBL:AL023862) oxidoreductase%2C SC3F9.05 (430 aa)%2C fasta scores opt: 721 z-score: 825.3 E():0 34.6%25 identity in 390 aa overlap. Contains a Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=SC8F11.14c;product=oxidoreductase;protein_id=NP_631053.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7755942	7756772	.	-	.	ID=id9079;Dbxref=GeneID:1102426;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 161.20%2C E-value 1.7e-44;gbkey=misc_feature;gene=SC8F11.14c
NC_003888.3	RefSeq	gene	7756901	7757431	.	-	.	ID=gene7051;Dbxref=GeneID:1102427;Name=SC8F11.15c;gbkey=Gene;gene=SC8F11.15c;gene_biotype=protein_coding;gene_synonym=SC8F11.15c;locus_tag=SCO6989
NC_003888.3	RefSeq	CDS	7756901	7757431	.	-	0	ID=cds6921;Parent=gene7051;Dbxref=Genbank:NP_631054.1,GeneID:1102427;Name=NP_631054.1;Note=SC8F11.15c%2C unknown%2C len: 176 aa.;gbkey=CDS;gene=SC8F11.15c;product=hypothetical protein;protein_id=NP_631054.1;transl_table=11
NC_003888.3	RefSeq	gene	7757496	7758473	.	-	.	ID=gene7052;Dbxref=GeneID:1102428;Name=SC8F11.16c;gbkey=Gene;gene=SC8F11.16c;gene_biotype=protein_coding;gene_synonym=SC8F11.16c;locus_tag=SCO6990
NC_003888.3	RefSeq	CDS	7757496	7758473	.	-	0	ID=cds6922;Parent=gene7052;Dbxref=Genbank:NP_631055.1,GeneID:1102428;Name=NP_631055.1;Note=SC8F11.16c%2C possible membrane transport protein%2C len: 325 aa. Similar to several Eukaryotic and Prokaryotic membrane transporters including: Homo sapiens SW:NTCI_HUMAN(EMBL:U10417) ileal sodium/bile acid co-transporter (348 aa)%2C fasta scores opt: 413 z-score: 449.9 E(): 1.3e-17 33.7%25 identity in 249 aa overlap and Aquifex aeolicus TR:O67889(EMBL:AE000774) Na(+) dependent transporter (297 aa)%2C fasta scores opt: 763 z-score: 824.8 E():0 42.9%25 identity in 289 aa overlap. Contains a Pfam match to entry PF01758 SBF%2C Sodium Bile acid symporter family. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8F11.16c;product=membrane transport protein;protein_id=NP_631055.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7757760	7758302	.	-	.	ID=id9080;Dbxref=GeneID:1102428;Note=Pfam match to entry PF01758 SBF%2C Sodium Bile acid symporter family%2C score 210.70%2C E-value 2.2e-59;gbkey=misc_feature;gene=SC8F11.16c
NC_003888.3	RefSeq	gene	7758904	7759110	.	+	.	ID=gene7053;Dbxref=GeneID:1102429;Name=SC8F11.17;gbkey=Gene;gene=SC8F11.17;gene_biotype=protein_coding;gene_synonym=SC8F11.17;locus_tag=SCO6991
NC_003888.3	RefSeq	CDS	7758904	7759110	.	+	0	ID=cds6923;Parent=gene7053;Dbxref=Genbank:NP_631056.1,GeneID:1102429;Name=NP_631056.1;Note=SC8F11.17%2C unknown%2C len: 68 aa.;gbkey=CDS;gene=SC8F11.17;product=hypothetical protein;protein_id=NP_631056.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7759219	7763134	.	+	.	ID=id9081;Note=shares 99.59%25 identity with S. coelicolor (EMBL:AF136167) regulators of secondary metabolism: AbsR1 (absR1) and AbsR2 (absR2).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7759229	7759302	.	+	.	ID=gene7054;Dbxref=GeneID:3240068;Name=SCOt65;gbkey=Gene;gene_biotype=tRNA;locus_tag=SCOt65
NC_003888.3	RefSeq	tRNA	7759229	7759302	.	+	.	ID=rna85;Parent=gene7054;Dbxref=GeneID:3240068;Note=tRNA Pro anticodon GGG%2C Cove score 78.36;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	exon	7759229	7759302	.	+	.	ID=id9082;Parent=rna85;Dbxref=GeneID:3240068;Note=tRNA Pro anticodon GGG%2C Cove score 78.36;gbkey=tRNA;product=tRNA-Pro
NC_003888.3	RefSeq	gene	7759825	7760904	.	-	.	ID=gene7055;Dbxref=GeneID:1102430;Name=absR1;gbkey=Gene;gene=absR1;gene_biotype=protein_coding;gene_synonym=absR1,SC8F11.18c;locus_tag=SCO6992
NC_003888.3	RefSeq	CDS	7759825	7760904	.	-	0	ID=cds6924;Parent=gene7055;Dbxref=Genbank:NP_631057.1,GeneID:1102430;Name=NP_631057.1;Note=SC8F11.18c%2C absR1%2C regulatory protein%2C len: 359 aa. Identical to that previously sequenced: Streptomyces coelicolor TR:AAF19103(EMBL:AF136167) activator of secondary metabolism%2C AbsR1.;gbkey=CDS;gene=absR1;product=regulatory protein;protein_id=NP_631057.1;transl_table=11
NC_003888.3	RefSeq	gene	7760983	7762803	.	+	.	ID=gene7056;Dbxref=GeneID:1102431;Name=absR2;gbkey=Gene;gene=absR2;gene_biotype=protein_coding;gene_synonym=absR2;locus_tag=SCO6993
NC_003888.3	RefSeq	CDS	7760983	7762803	.	+	0	ID=cds6925;Parent=gene7056;Dbxref=Genbank:NP_631058.1,GeneID:1102431;Name=NP_631058.1;Note=SC8F11.19%2C absR2%2C regulatory protein%2C len: 606 aa. Shares 98.8 %25 sequence identity with that previously sequenced: Streptomyces coelicolor TR:AAF19103 (EMBL:AF136167) repressor of secondary metabolism%2C AbsR2. Contains a PS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C with a helix-turn-helix motif situated between residues 559..580 (+4.00 SD);gbkey=CDS;gene=absR2;product=regulatory protein;protein_id=NP_631058.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7761124	7761147	.	+	.	ID=id9083;Dbxref=GeneID:1102431;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=absR2
NC_003888.3	RefSeq	sequence_feature	7762603	7762800	.	+	.	ID=id9084;Dbxref=GeneID:1102431;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 38.60%2C E-value 1.4e-07;gbkey=misc_feature;gene=absR2
NC_003888.3	RefSeq	gene	7762852	7766112	.	-	.	ID=gene7057;Dbxref=GeneID:1102432;Name=SC8F11.20c;gbkey=Gene;gene=SC8F11.20c;gene_biotype=protein_coding;gene_synonym=SC8F11.20c;locus_tag=SCO6994
NC_003888.3	RefSeq	CDS	7762852	7766112	.	-	0	ID=cds6926;Parent=gene7057;Dbxref=Genbank:NP_631059.1,GeneID:1102432;Name=NP_631059.1;Note=SC8F11.20c%2C unknown%2C len: 1068 aa.;gbkey=CDS;gene=SC8F11.20c;product=hypothetical protein;protein_id=NP_631059.1;transl_table=11
NC_003888.3	RefSeq	gene	7766257	7767690	.	+	.	ID=gene7058;Dbxref=GeneID:1102433;Name=SC8F11.21;gbkey=Gene;gene=SC8F11.21;gene_biotype=protein_coding;gene_synonym=SC8F11.21;locus_tag=SCO6995
NC_003888.3	RefSeq	CDS	7766257	7767690	.	+	0	ID=cds6927;Parent=gene7058;Dbxref=Genbank:NP_631060.1,GeneID:1102433;Name=NP_631060.1;Note=SC8F11.21%2C possible protease%2C len: 477 aa. Weakly similar in parts to a number or serine proteases e.g. Thermoactinomyces sp. TR:Q56365(EMBL:U31759) thermostable alkaline protease (384 aa)%2C fast scores opt: 220 z-score: 245.7 E(): 3e-06 26.2%25 identity in 263 aa overlap. Contains Prosite hits to PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site%2CPS00137 Serine proteases%2C subtilase family%2C histidine active site and PS00138 Serine proteases%2C subtilase family%2C serine active site.;gbkey=CDS;gene=SC8F11.21;product=protease;protein_id=NP_631060.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7766743	7766775	.	+	.	ID=id9085;Dbxref=GeneID:1102433;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SC8F11.21
NC_003888.3	RefSeq	sequence_feature	7766866	7766898	.	+	.	ID=id9086;Dbxref=GeneID:1102433;Note=PS00137 Serine proteases%2C subtilase family%2C histidine active site;gbkey=misc_feature;gene=SC8F11.21
NC_003888.3	RefSeq	sequence_feature	7767487	7767519	.	+	.	ID=id9087;Dbxref=GeneID:1102433;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site;gbkey=misc_feature;gene=SC8F11.21
NC_003888.3	RefSeq	gene	7767762	7768337	.	+	.	ID=gene7059;Dbxref=GeneID:1102434;Name=SC8F11.22;gbkey=Gene;gene=SC8F11.22;gene_biotype=protein_coding;gene_synonym=SC8F11.22;locus_tag=SCO6996
NC_003888.3	RefSeq	CDS	7767762	7768337	.	+	0	ID=cds6928;Parent=gene7059;Dbxref=Genbank:NP_631061.1,GeneID:1102434;Name=NP_631061.1;Note=SC8F11.22%2C possible RNA polymerase sigma factor%2C len: 191 aa. Weakly similar to Streptomyces coelicolor sigma factor TR:CAB76082 (EMBL:AL157953) RNA polymerase sigma factor%2C SCL11.20C (166 aa)%2C fasta scores opt: 206 z-score: 259.9 E(): 4.8e-07 30.4%25 identity in 161 aa overlap.;gbkey=CDS;gene=SC8F11.22;product=RNA polymerase sigma factor;protein_id=NP_631061.1;transl_table=11
NC_003888.3	RefSeq	gene	7768334	7768825	.	+	.	ID=gene7060;Dbxref=GeneID:1102435;Name=SC8F11.23;gbkey=Gene;gene=SC8F11.23;gene_biotype=protein_coding;gene_synonym=SC8F11.23;locus_tag=SCO6997
NC_003888.3	RefSeq	CDS	7768334	7768825	.	+	0	ID=cds6929;Parent=gene7060;Dbxref=Genbank:NP_631062.1,GeneID:1102435;Name=NP_631062.1;Note=SC8F11.23%2C unknown%2C len: 163 aa. The very N-terminus is Asp rich.;gbkey=CDS;gene=SC8F11.23;product=hypothetical protein;protein_id=NP_631062.1;transl_table=11
NC_003888.3	RefSeq	gene	7768860	7770083	.	-	.	ID=gene7061;Dbxref=GeneID:1102436;Name=SC8F11.24c;gbkey=Gene;gene=SC8F11.24c;gene_biotype=protein_coding;gene_synonym=SC8F11.24c;locus_tag=SCO6998
NC_003888.3	RefSeq	CDS	7768860	7770083	.	-	0	ID=cds6930;Parent=gene7061;Dbxref=Genbank:NP_631063.1,GeneID:1102436;Name=NP_631063.1;Note=SC8F11.24c%2C possible cytochrome P450%2C len: 407 aa. Similar to many possible cytochrome P450s including: Streptomyces griseolus SW:CPXF_STRGO (EMBL:M32239) cytochrome P450-SU2 (402 aa)%2C fasta scores opt: 735 z-score: 827.8 E(): 0 34.3%25 identity in 408 aa overlap. Contains 2xPfam matches to entries PF00067 p450%2C Cytochrome P450.;gbkey=CDS;gene=SC8F11.24c;product=cytochrome P450;protein_id=NP_631063.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7768908	7769318	.	-	.	ID=id9088;Dbxref=GeneID:1102436;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 76.60%2C E-value 7.2e-21;gbkey=misc_feature;gene=SC8F11.24c
NC_003888.3	RefSeq	sequence_feature	7769568	7770047	.	-	.	ID=id9089;Dbxref=GeneID:1102436;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 17.30%2C E-value 0.00042;gbkey=misc_feature;gene=SC8F11.24c
NC_003888.3	RefSeq	gene	7770163	7770960	.	-	.	ID=gene7062;Dbxref=GeneID:1102437;Name=SC8F11.25c.;gbkey=Gene;gene=SC8F11.25c.;gene_biotype=protein_coding;gene_synonym=SC8F11.25c.;locus_tag=SCO6999
NC_003888.3	RefSeq	CDS	7770163	7770960	.	-	0	ID=cds6931;Parent=gene7062;Dbxref=Genbank:NP_631064.1,GeneID:1102437;Name=NP_631064.1;Note=SC8F11.25c%2C unknown%2C len: 265 aa.;gbkey=CDS;gene=SC8F11.25c.;product=hypothetical protein;protein_id=NP_631064.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7770923	7773476	.	-	.	ID=id9090;Note=shares 99.53%25 identity with S. coelicolor (EMBL:AF127018) Streptomyces coelicolor isocitrate dehydrogenase (idh) gene%2C idh-B allele%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7771060	7773279	.	-	.	ID=gene7063;Dbxref=GeneID:1102438;Name=idh;gbkey=Gene;gene=idh;gene_biotype=protein_coding;gene_synonym=idh,SC8F11.26c;locus_tag=SCO7000
NC_003888.3	RefSeq	CDS	7771060	7773279	.	-	0	ID=cds6932;Parent=gene7063;Dbxref=Genbank:NP_631065.1,GeneID:1102438;Name=NP_631065.1;Note=SC8F11.26c%2C idh%2C isocitrate dehydrogenase%2C len: 739 aa. Shares 97.8%25 sequence identity with that previously sequenced and characterised: Streptomyces coelicolor isocitrate dehydrogenase Idh%2C 741 aa TR:Q9X5M9(EMBL:AF127018);gbkey=CDS;gene=idh;product=isocitrate dehydrogenase;protein_id=NP_631065.1;transl_table=11
NC_003888.3	RefSeq	gene	7773382	7774443	.	-	.	ID=gene7064;Dbxref=GeneID:1102439;Name=SC8F11.27c;gbkey=Gene;gene=SC8F11.27c;gene_biotype=protein_coding;gene_synonym=SC8F11.27c;locus_tag=SCO7001
NC_003888.3	RefSeq	CDS	7773382	7774443	.	-	0	ID=cds6933;Parent=gene7064;Dbxref=Genbank:NP_631066.1,GeneID:1102439;Name=NP_631066.1;Note=SC8F11.27c%2C possible integral membrane protein%2C len: 353 aa. Similar to many proteins of undefined function including: Methanococcus jannaschii SW:Y170_METJA(EMBL:U67474) (350 aa)%2C fasta scores opt: 410 z-score: 451.3 E(): 1e-17 26.3%25 identity in 335 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence. Also contains a Pfam match to entry PF00924 UPF0003%2C Uncharacterized protein family UPF0003;gbkey=CDS;gene=SC8F11.27c;product=hypothetical protein;protein_id=NP_631066.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7773469	7774239	.	-	.	ID=id9091;Dbxref=GeneID:1102439;Note=Pfam match to entry PF00924 UPF0003%2C Uncharacterized protein family UPF0003%2C score 166.50%2C E-value 4.4e-46;gbkey=misc_feature;gene=SC8F11.27c
NC_003888.3	RefSeq	gene	7774616	7776130	.	-	.	ID=gene7065;Dbxref=GeneID:1102440;Name=SC8F11.28c;gbkey=Gene;gene=SC8F11.28c;gene_biotype=protein_coding;gene_synonym=SC8F11.28c;locus_tag=SCO7002
NC_003888.3	RefSeq	CDS	7774616	7776130	.	-	0	ID=cds6934;Parent=gene7065;Dbxref=Genbank:NP_631067.1,GeneID:1102440;Name=NP_631067.1;Note=SC8F11.28c%2C probable amino acid/metabolite permease%2C len: 504 aa. Highly similar to many Eukaryotic and Prokaryotic permeases including: Saccharomyces cerevisiae SW:UGA4_YEAST(EMBL:X66472) GABA-specific permease (571 aa)%2C fasta scores opt: 583 z-score: 659.1 E(): 2.8e-29 30.8%25 identity in 510 aa overlap and Streptomyces coelicolor TR:CAB56378(EMBL:AL118515) possible amino acid/metabolite permease (fragment)%2C SCD17.01 (389 aa)%2C fasta scores opt: 1521 z-score: 1718.0 E():0 62.7%25 identity in 359 aa overlap. Contains a Prosite hit to PS00218 Amino acid permeases signature and a Pfam match to entry PF00324 aa_permeases%2C Amino acid permease. Also contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8F11.28c;product=amino acid/metabolite permease;protein_id=NP_631067.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7774694	7776007	.	-	.	ID=id9092;Dbxref=GeneID:1102440;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -121.30%2C E-value 4e-08;gbkey=misc_feature;gene=SC8F11.28c
NC_003888.3	RefSeq	sequence_feature	7775861	7775956	.	-	.	ID=id9093;Dbxref=GeneID:1102440;Note=PS00218 Amino acid permeases signature;gbkey=misc_feature;gene=SC8F11.28c
NC_003888.3	RefSeq	ribosome_entry_site	7776136	7776141	.	-	.	ID=id9094;gbkey=RBS
NC_003888.3	RefSeq	gene	7776162	7777172	.	-	.	ID=gene7066;Dbxref=GeneID:1102441;Name=SC8F11.29c;gbkey=Gene;gene=SC8F11.29c;gene_biotype=protein_coding;gene_synonym=SC8F11.29c;locus_tag=SCO7003
NC_003888.3	RefSeq	CDS	7776162	7777172	.	-	0	ID=cds6935;Parent=gene7066;Dbxref=Genbank:NP_631068.1,GeneID:1102441;Name=NP_631068.1;Note=SC8F11.29c%2C unknown%2C len: 336 aa. Similar in parts to a protein of undefined function from Streptomyces coelicolor: TR:CAB46782(EMBL:AL096811) SCI30A.05C (338 aa)%2C fasta scores opt: 249 z-score: 278.0 E(): 4.7e-08 34.8%25 identity in 319 aa overlap.;gbkey=CDS;gene=SC8F11.29c;product=hypothetical protein;protein_id=NP_631068.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7777435	7777441	.	+	.	ID=id9095;gbkey=RBS
NC_003888.3	RefSeq	gene	7777445	7778884	.	+	.	ID=gene7067;Dbxref=GeneID:1102442;Name=SC8F11.30;gbkey=Gene;gene=SC8F11.30;gene_biotype=protein_coding;gene_synonym=SC8F11.30;locus_tag=SCO7004
NC_003888.3	RefSeq	CDS	7777445	7778884	.	+	0	ID=cds6936;Parent=gene7067;Dbxref=Genbank:NP_631069.1,GeneID:1102442;Name=NP_631069.1;Note=SC8F11.30%2C probable carbohydrate kinase%2Clen: 479 aa. Highly similar to many e.g. Bacillus subtilis SW:GLPK_BACSU(EMBL:M34393) glycerol kinase (EC 2.7.1.30)%2C GlpK (496 aa)%2C fasta scores opt: 688 z-score: 766.4 E():0 35.1%25 identity in 496 aa overlap. Contains a Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases.;gbkey=CDS;gene=SC8F11.30;product=carbohydrate kinase;protein_id=NP_631069.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7777661	7778716	.	+	.	ID=id9096;Dbxref=GeneID:1102442;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C score 229.20%2C E-value 6e-65;gbkey=misc_feature;gene=SC8F11.30
NC_003888.3	RefSeq	gene	7778881	7780284	.	+	.	ID=gene7068;Dbxref=GeneID:1102443;Name=SC8F11.31;gbkey=Gene;gene=SC8F11.31;gene_biotype=protein_coding;gene_synonym=SC8F11.31;locus_tag=SCO7005
NC_003888.3	RefSeq	CDS	7778881	7780284	.	+	0	ID=cds6937;Parent=gene7068;Dbxref=Genbank:NP_631070.1,GeneID:1102443;Name=NP_631070.1;Note=SC8F11.31%2C possible oxidoreductase%2C len: 467 aa. Similar to several including: Homo sapiens TR:AAF21941(EMBL:AF111858) dimethylglycine dehydrogenase precursor (EC 1.5.99.2) (866 aa)%2C fasta scores opt: 217 z-score: 242.0 E(): 4.7e-06 24.7%25 identity in 372 aa overlap and Pyrococcus abyssi TR:CAB49193(EMBL:AJ248283) glycerol-3-phosphate dehydrogenase%2C GlpA (497 aa)%2C fasta scores opt: 787 z-score: 883.5 E(): 0 36.1%25 identity in 454 aa overlap. Contains a Pfam match to entry PF01224 FAD_Gly3P_dh%2C FAD-dependent glycerol-3-phosphate dehydrogenase. Also contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC8F11.31;product=oxidoreductase;protein_id=NP_631070.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7778911	7780275	.	+	.	ID=id9097;Dbxref=GeneID:1102443;Note=Pfam match to entry PF01224 FAD_Gly3P_dh%2C FAD-dependent glycerol-3-phosphate dehydrogenase%2C score -230.60%2C E-value 0.0015;gbkey=misc_feature;gene=SC8F11.31
NC_003888.3	RefSeq	sequence_feature	7778926	7778958	.	+	.	ID=id9098;Dbxref=GeneID:1102443;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC8F11.31
NC_003888.3	RefSeq	gene	7780281	7781531	.	+	.	ID=gene7069;Dbxref=GeneID:1102444;Name=SC8F11.32;gbkey=Gene;gene=SC8F11.32;gene_biotype=protein_coding;gene_synonym=SC8F11.32;locus_tag=SCO7006
NC_003888.3	RefSeq	CDS	7780281	7781531	.	+	0	ID=cds6938;Parent=gene7069;Dbxref=Genbank:NP_631071.1,GeneID:1102444;Name=NP_631071.1;Note=SC8F11.32%2C possible oxidoreductase%2C len: 416 aa. Similar to several e.g. Mycobacterium smegmatis SW:TRXB_MYCSM(EMBL:AF023161) thioredoxin reductase (EC 1.6.4.5) (311 aa)%2C fasta scores opt: 323 z-score: 335.5 E(): 2.9e-11 30.6%25 identity in 314 aa overlap.;gbkey=CDS;gene=SC8F11.32;product=oxidoreductase;protein_id=NP_631071.1;transl_table=11
NC_003888.3	RefSeq	gene	7781548	7782447	.	-	.	ID=gene7070;Dbxref=GeneID:1102445;Name=SC8F11.33;gbkey=Gene;gene=SC8F11.33;gene_biotype=protein_coding;gene_synonym=SC8F11.33;locus_tag=SCO7007
NC_003888.3	RefSeq	CDS	7781548	7782447	.	-	0	ID=cds6939;Parent=gene7070;Dbxref=Genbank:NP_631072.1,GeneID:1102445;Name=NP_631072.1;Note=SC8F11.33%2C possible integral membrane protein%2C len: 299 aa. Contains multiple possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence.;gbkey=CDS;gene=SC8F11.33;product=hypothetical protein;protein_id=NP_631072.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7782457	7782461	.	-	.	ID=id9099;gbkey=RBS
NC_003888.3	RefSeq	gene	7782661	7784535	.	+	.	ID=gene7071;Dbxref=GeneID:1102446;Name=SC8F11.34;gbkey=Gene;gene=SC8F11.34;gene_biotype=protein_coding;gene_synonym=SC8F11.34;locus_tag=SCO7008
NC_003888.3	RefSeq	CDS	7782661	7784535	.	+	0	ID=cds6940;Parent=gene7071;Dbxref=Genbank:NP_631073.1,GeneID:1102446;Name=NP_631073.1;gbkey=CDS;gene=SC8F11.34;product=ABC transporter ATP-binding protein;protein_id=NP_631073.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7782781	7783602	.	+	.	ID=id9100;Dbxref=GeneID:1102446;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 130.20%2C E-value 3.7e-35;gbkey=misc_feature;gene=SC8F11.34
NC_003888.3	RefSeq	sequence_feature	7783873	7784427	.	+	.	ID=id9101;Dbxref=GeneID:1102446;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 205.60%2C E-value 7.8e-58;gbkey=misc_feature;gene=SC8F11.34
NC_003888.3	RefSeq	sequence_feature	7783894	7783917	.	+	.	ID=id9102;Dbxref=GeneID:1102446;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8F11.34
NC_003888.3	RefSeq	sequence_feature	7784206	7784250	.	+	.	ID=id9103;Dbxref=GeneID:1102446;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC8F11.34
NC_003888.3	RefSeq	gene	7784586	7786367	.	-	.	ID=gene7072;Dbxref=GeneID:1102447;Name=SC8F11.35c;gbkey=Gene;gene=SC8F11.35c;gene_biotype=protein_coding;gene_synonym=SC8F11.35c;locus_tag=SCO7009
NC_003888.3	RefSeq	CDS	7784586	7786367	.	-	0	ID=cds6941;Parent=gene7072;Dbxref=Genbank:NP_631074.1,GeneID:1102447;Name=NP_631074.1;Note=SC8F11.35c%2C unknown%2C len: 593 aa. Identical%2C apart from the very C-terminus%2C to Streptomyces lividans TR:O86875(EMBL:U22894) hypothetical 57.9 kd protein%2C AglX (547 aa)%2C fasta scores opt: 3357 z-score: 3741.0 E(): 0 98.8%25 identity in 519 aa overlap. Also highly similar to several Streptomyces coelicolor hypothetical proteins e.g. TR:CAB61537(EMBL:AL133171) SCF81.26 (835 aa)%2C fasta scores opt: 1133 z-score: 1260.6 E(): 0 43.0%25 identity in 575 aa overlap.;gbkey=CDS;gene=SC8F11.35c;product=hypothetical protein;protein_id=NP_631074.1;transl_table=11
NC_003888.3	RefSeq	gene	7786480	7788084	.	-	.	ID=gene7073;Dbxref=GeneID:1102448;Name=aglA;gbkey=Gene;gene=aglA;gene_biotype=protein_coding;gene_synonym=aglA;locus_tag=SCO7010
NC_003888.3	RefSeq	CDS	7786480	7788084	.	-	0	ID=cds6942;Parent=gene7073;Dbxref=Genbank:NP_631075.1,GeneID:1102448;Name=NP_631075.1;Note=SC8F11.36c%2C aglA%2C alpha glucosidase%2C len: 534 aa. Identical to Streptomyces lividans TR:O86874(EMBL:U22894) alpha glucosidase%2C AglA (534 aa)%2C fasta scores opt: 3764 z-score: 4189.4 E(): 0 99.6%25 identity in 534 aa overlap. Also highly similar to many other glycosyl hydrolases e.g. Escherichia coli SW:TREC_ECOLI(EMBL:U06195) trehalose-6-phosphate hydrolase (EC 3.2.1.93) (551 aa)%2C fasta scores opt: 882 z-score: 982.3 E():0 36.1%25 identity in 523 aa overlap and Streptomyces coelicolor SC10B7.07 (577 aa)%2C fasta scores opt: 1026 z-score: 1004.4 E():0 55.0%25 identity in 565 aa overlap. Contains a Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase.;gbkey=CDS;gene=aglA;product=alpha glucosidase;protein_id=NP_631075.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7786504	7788036	.	-	.	ID=id9104;Dbxref=GeneID:1102448;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 225.10%2C E-value 1e-63;gbkey=misc_feature;gene=aglA
NC_003888.3	RefSeq	gene	7788229	7789104	.	-	.	ID=gene7074;Dbxref=GeneID:1102449;Name=SC8F11.37c;gbkey=Gene;gene=SC8F11.37c;gene_biotype=protein_coding;gene_synonym=SC8F11.37c;locus_tag=SCO7011
NC_003888.3	RefSeq	CDS	7788229	7789104	.	-	0	ID=cds6943;Parent=gene7074;Dbxref=Genbank:NP_631076.1,GeneID:1102449;Name=NP_631076.1;Note=SC8F11.37c%2C possible membrane transport protein%2C len: 291 aa. Identical to Streptomyces lividans TR:O86873(EMBL:U22894) integral membrane protein%2C AglG (291 aa)%2C fasta scores opt: 1890 z-score: 2239.5 E():0 100.0%25 identity in 291 aa overlap. Also similar to many sugar transport proteins e.g. Clostridium perfringens TR:Q06111(EMBL:X66092) transport system permease (275 aa)%2C fasta scores opt: 515 z-score: 616.2 E(): 6.9e-27 32.4%25 identity in 259 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8F11.37c;product=membrane transport protein;protein_id=NP_631076.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7788352	7788576	.	-	.	ID=id9105;Dbxref=GeneID:1102449;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 59.20%2C E-value 9e-14;gbkey=misc_feature;gene=SC8F11.37c
NC_003888.3	RefSeq	gene	7789123	7790082	.	-	.	ID=gene7075;Dbxref=GeneID:1102450;Name=SC1H10.01c;gbkey=Gene;gene=SC1H10.01c;gene_biotype=protein_coding;gene_synonym=SC1H10.01c,SC8F11.38c;locus_tag=SCO7012
NC_003888.3	RefSeq	CDS	7789123	7790082	.	-	0	ID=cds6944;Parent=gene7075;Dbxref=Genbank:NP_733720.1,GeneID:1102450;Name=NP_733720.1;Note=SC1H10.01c%2C possible binding protein dependent transport protein%2C partial CDS%2C len: > 288 aa. Almost identical to Streptomyces lividans TR:O86872(EMBL:U22894) integral membrane protein%2C AglF (231 aa)%2C fasta scores opt: 1469 z-score: 1755.6 E(): 0 96.9%25 identity in 224 aa overlap. Also similar to Streptomyces coelicolor TR:CAB59596(EMBL:AL132662) probable sugar transporter inner membrane protein%2C SCF11.19 (316 aa)%2C fasta scores opt: 575 z-score: 690.1 E(): 5.1e-31 38.1%25 identity in 273 aa overlap. Contains a Prosite hit to PS00402 Binding-protein-dependent transport systems inner membrane comp sign and a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Also contains multiple possible membrane spanning hydrophobic domains.~SC8F11.38c%2C possible membrane transport protein%2C partial CDS%2C len:> 71 aa. Similar to several e.g. Streptococcus mutans SW:MSMF_STRMU(EMBL:M77351) multiple sugar-binding transport system permease%2C MsmF (290 aa)%2C fasta scores opt: 167 z-score: 244.0 E(): 3.8e-06 43.1%25 identity in 65 aa overlap. Contains possible membrane spanning hydrophobic domains. Overlaps and extends into CDS SC1H10.01c on the adjoining cosmid.;gbkey=CDS;gene=SC1H10.01c;product=binding protein dependent transport protein;protein_id=NP_733720.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7789231	7789467	.	-	.	ID=id9106;Dbxref=GeneID:1102450;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 51.10%2C E-value 2.5e-11;gbkey=misc_feature;gene=SC1H10.01c
NC_003888.3	RefSeq	sequence_feature	7789378	7789464	.	-	.	ID=id9107;Dbxref=GeneID:1102450;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign;gbkey=misc_feature;gene=SC1H10.01c
NC_003888.3	RefSeq	gene	7790150	7791565	.	-	.	ID=gene7076;Dbxref=GeneID:1102451;Name=SC1H10.02c;gbkey=Gene;gene=SC1H10.02c;gene_biotype=protein_coding;gene_synonym=SC1H10.02c;locus_tag=SCO7013
NC_003888.3	RefSeq	CDS	7790150	7791565	.	-	0	ID=cds6945;Parent=gene7076;Dbxref=Genbank:NP_631077.1,GeneID:1102451;Name=NP_631077.1;Note=SC1H10.02C%2C possible sugar-binding lipoprotein%2C len: 471 aa. Identical to Streptomyces lividans TR:Q54334(EMBL:U22894) sugar binding lipoprotein precursor%2C AlgE (471 aa)%2C fasta scores opt: 3154 z-score: 3469.8 E():0 100.0%25 identity in 471 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC1H10.02c;product=sugar-binding lipoprotein;protein_id=NP_631077.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7791479	7791511	.	-	.	ID=id9108;Dbxref=GeneID:1102451;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC1H10.02c
NC_003888.3	RefSeq	gene	7791717	7792730	.	-	.	ID=gene7077;Dbxref=GeneID:1102452;Name=SC1H10.03c;gbkey=Gene;gene=SC1H10.03c;gene_biotype=protein_coding;gene_synonym=SC1H10.03c;locus_tag=SCO7014
NC_003888.3	RefSeq	CDS	7791717	7792730	.	-	0	ID=cds6946;Parent=gene7077;Dbxref=Genbank:NP_631078.1,GeneID:1102452;Name=NP_631078.1;Note=SC1H10.03c%2C probable LacI-family transcriptional regulatory protein%2C len: 337 aa. Identical to Streptomyces lividans protein encoded on the 1 kb TR:Q57276 (EMBL:X65466) right direct repeat sequence contained within the amplifiable AUD1 element (337 aa)%2C fasta scores opt: 2188 z-score: 2534.7 E():0 99.7%25 identity in 337 aa overlap. Also highly similar to Streptomyces coelicolor SW:MALR_STRCO (EMBL:Y07706) maltose operon transcriptional repressor%2C MalR or SC10B7.03c (344 aa)%2C fasta scores opt: 1114 z-score: 1293.5 E():0 53.3%25 identity in 336 aa overlap. This gene is duplicated on this cosmid and shares 94%25 identity in a 337 bp overlap with CDS SC1H10.05c. Contains Pfam hits to Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family with the helix-turn-helix motif situated between residues 3..24 (+7.33 SD).;gbkey=CDS;gene=SC1H10.03c;product=LacI family transcriptional regulator;protein_id=NP_631078.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7791719	7792731	.	-	.	ID=id9109;Note=direct repeat. This region is duplicated between complement (8155..9164) and shares 94 %25 identity%2C in 1017 nt overlap%2C with this region. This region is also identical to the Streptomyces lividans right direct repeat sequence (RDR) found within amplifiable element AUD1 (EMBL:U22894).;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	7791828	7792565	.	-	.	ID=id9110;Dbxref=GeneID:1102452;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 98.30%2C E-value 1.5e-25;gbkey=misc_feature;gene=SC1H10.03c
NC_003888.3	RefSeq	sequence_feature	7792647	7792709	.	-	.	ID=id9111;Dbxref=GeneID:1102452;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 27.60%2C E-value 3e-06;gbkey=misc_feature;gene=SC1H10.03c
NC_003888.3	RefSeq	sequence_feature	7792732	7797372	.	-	.	ID=id9112;Note=identical to the Streptomyces lividans AUD1 4.7 kb repeated region (EMBL:U22894).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7792823	7797124	.	-	.	ID=gene7078;Dbxref=GeneID:1102453;Name=SC1H10.04c;gbkey=Gene;gene=SC1H10.04c;gene_biotype=protein_coding;gene_synonym=SC1H10.04c;locus_tag=SCO7015
NC_003888.3	RefSeq	CDS	7792823	7797124	.	-	0	ID=cds6947;Parent=gene7078;Dbxref=Genbank:NP_631079.1,GeneID:1102453;Name=NP_631079.1;Note=SC1H10.04c%2C possible  glycosyl hydrolase%2C len: 1433 aa. Identical to Streptomyces lividans TR:P75020(EMBL:U22894) chitinase homolog found within the 4.7 kb amplifiable unit of the AUD1 element (1433 aa)%2C fasta scores opt: 9322 z-score: 9526.2 E():0 99.5%25 identity in 1433 aa overlap. C-terminal similar to TR:BAB62749 (EMBL:AB055506) mycodextranase from Streptomyces sp. J-13-3 fasta scores%3B opt: 865%2C Z-score: 887.6%2C 32.953%25 identity (36.861%25 ungapped) in 613 aa overlap. Also weakly similar%2C in parts%2C to Bacillus circulans SW:CHI1_BACCI(EMBL:M57601) chitinase A1 precursor (EC 3.2.1.14) (699 aa)%2C fasta scores opt: 497 z-score: 507.9 E(): 7.2e-21 47.3%25 identity in 182 aa overlap. Contains a possible N-terminal signal sequence and 2x Pfam matches to entries PF00041 fn3%2C Fibronectin type III domain.;gbkey=CDS;gene=SC1H10.04c;product=glycosyl hydrolase;protein_id=NP_631079.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7795655	7795882	.	-	.	ID=id9113;Dbxref=GeneID:1102453;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 13.80%2C E-value 0.12;gbkey=misc_feature;gene=SC1H10.04c
NC_003888.3	RefSeq	sequence_feature	7795925	7796161	.	-	.	ID=id9114;Dbxref=GeneID:1102453;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 12.20%2C E-value 0.17;gbkey=misc_feature;gene=SC1H10.04c
NC_003888.3	RefSeq	gene	7797371	7798381	.	-	.	ID=gene7079;Dbxref=GeneID:1102454;Name=SC1H10.05c;gbkey=Gene;gene=SC1H10.05c;gene_biotype=protein_coding;gene_synonym=SC1H10.05c;locus_tag=SCO7016
NC_003888.3	RefSeq	CDS	7797371	7798381	.	-	0	ID=cds6948;Parent=gene7079;Dbxref=Genbank:NP_631080.1,GeneID:1102454;Name=NP_631080.1;Note=SC1H10.05c%2C possible LacI-family transcriptional regulatory protein%2C len: 336 aa. Identical to Streptomyces lividans protein encoded on the 1 kb TR: Q57094(EMBL:U22894) left direct repeat sequence contained within the amplifiable AUD1 element (336 aa)%2C fasta scores opt: 2173 z-score: 2549.4 E():0 99.4%25 identity in 336 aa overlap. Also highly similar to Streptomyces coelicolor SW:MALR_STRCO (EMBL:Y07706) maltose operon transcriptional repressor%2C MalR or SC10B7.03c (344 aa)%2C fasta scores opt: 1137 z-score: 1336.5 E():0 53.7%25 identity in 341 aa overlap. This gene is duplicated on this cosmid and shares 94%25 identity in a 337 bp overlap with CDS SC1H10.03c. Contains Pfam hits to Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family with the helix-turn-helix motif situated between residues 3..24 (+7.33 SD).;gbkey=CDS;gene=SC1H10.05c;product=LacI family transcriptional regulator;protein_id=NP_631080.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7797373	7798382	.	-	.	ID=id9115;Note=direct repeat. This region is duplicated between complement(2501..3513) and shares 94 %25 identity%2C in 1017 nt overlap%2C with this region. This region is also identical to the Streptomyces lividans left direct repeat sequence (LDR) and middle direct repeats found within amplifiable element AUD1 (EMBL:U22894).;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	7797482	7798216	.	-	.	ID=id9116;Dbxref=GeneID:1102454;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 103.20%2C E-value 5.2e-27;gbkey=misc_feature;gene=SC1H10.05c
NC_003888.3	RefSeq	sequence_feature	7798298	7798360	.	-	.	ID=id9117;Dbxref=GeneID:1102454;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 27.60%2C E-value 3e-06;gbkey=misc_feature;gene=SC1H10.05c
NC_003888.3	RefSeq	gene	7798420	7799325	.	-	.	ID=gene7080;Dbxref=GeneID:1102455;Name=SC1H10.06c;gbkey=Gene;gene=SC1H10.06c;gene_biotype=protein_coding;gene_synonym=SC1H10.06c;locus_tag=SCO7017
NC_003888.3	RefSeq	CDS	7798420	7799325	.	-	0	ID=cds6949;Parent=gene7080;Dbxref=Genbank:NP_631081.1,GeneID:1102455;Name=NP_631081.1;Note=SC1H10.06c%2C possible membrane protein%2C len: 297 aa. Similar to several including: Streptomyces coelicolor TR:Q9XAL0 (EMBL:AL079348) membrane protein%2C SC66T3.03 (330 aa)%2C fasta scores opt: 561 z-score: 634.9 E(): 6.4e-28 50.8%25 identity in 315 aa overlap. Contains possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SC1H10.06c;product=hypothetical protein;protein_id=NP_631081.1;transl_table=11
NC_003888.3	RefSeq	gene	7800083	7801600	.	+	.	ID=gene7081;Dbxref=GeneID:1102456;Name=SC1H10.07;gbkey=Gene;gene=SC1H10.07;gene_biotype=protein_coding;gene_synonym=SC1H10.07;locus_tag=SCO7018
NC_003888.3	RefSeq	CDS	7800083	7801600	.	+	0	ID=cds6950;Parent=gene7081;Dbxref=Genbank:NP_631082.1,GeneID:1102456;Name=NP_631082.1;Note=SC1H10.07%2C unknown%2C len: 505 aa.;gbkey=CDS;gene=SC1H10.07;product=hypothetical protein;protein_id=NP_631082.1;transl_table=11
NC_003888.3	RefSeq	gene	7801756	7804737	.	-	.	ID=gene7082;Dbxref=GeneID:1102457;Name=aml;gbkey=Gene;gene=aml;gene_biotype=protein_coding;gene_synonym=aml;locus_tag=SCO7019
NC_003888.3	RefSeq	CDS	7801756	7804737	.	-	0	ID=cds6951;Parent=gene7082;Dbxref=Genbank:NP_631083.1,GeneID:1102457;Name=NP_631083.1;Note=SC1H10.08c%2C aml%2C  alpha-amylase (EC 3.2.1.1)%2C len: 993. Identical to Streptomyces lividans TR:P96992(EMBL:Z86113) alpha-amylase%2C AmlC (993 aa)%2C fasta scores opt: 6792 z-score: 6947.5 E(): 0 99.1%25 identity in 993 aa overlap. Also highly similar to the alpha-amylase domain of Paenibacillus polymyxa (Bacillus polymyxa) SW:AMYB_PAEPO(EMBL:M15817) beta/alpha-amylase precursor (1196 aa)%2C fasta scores opt: 423 z-score: 430.0 E(): 1.6e-16 28.9%25 identity in 956 aa overlap. Contains a Pfam matches to entries PF00128 alpha-amylase%2C Alpha amylase and PF00041 fn3%2C Fibronectin type III domain. Also contains a possible N-terminal signal sequence.;gbkey=CDS;gene=aml;product=alpha-amylase;protein_id=NP_631083.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7801885	7803648	.	-	.	ID=id9118;Dbxref=GeneID:1102457;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 127.00%2C E-value 3.5e-34;gbkey=misc_feature;gene=aml
NC_003888.3	RefSeq	sequence_feature	7803730	7803972	.	-	.	ID=id9119;Dbxref=GeneID:1102457;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 40.80%2C E-value 3.1e-08;gbkey=misc_feature;gene=aml
NC_003888.3	RefSeq	gene	7805118	7806638	.	+	.	ID=gene7083;Dbxref=GeneID:1102458;Name=amlB;gbkey=Gene;gene=amlB;gene_biotype=protein_coding;gene_synonym=amlB;locus_tag=SCO7020
NC_003888.3	RefSeq	CDS	7805118	7806638	.	+	0	ID=cds6952;Parent=gene7083;Dbxref=Genbank:NP_631084.1,GeneID:1102458;Name=NP_631084.1;Note=SC1H10.09%2C amlB%2C  alpha-amylase (EC 3.2.1.1)%2C len: 506 aa. Highly similar to Streptomyces lividans TR:P97179(EMBL:Z85949) alpha-amylase%2C AmlB (573 aa)%2C fasta scores opt: 3422 z-score: 3742.9 E(): 0 98.6%25 identity in 506 aa overlap and Streptomyces violaceus SW:AMY_STRVL(EMBL:U22894) alpha-amylase precursor (EC 3.2.1.1)%2C (569 aa)%2C fasta scores opt: 2682 z-score: 2933.9 E(): 0 77.1%25 identity in 502 aa overlap. Contains a Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase and a possible N-terminal signal sequence.;gbkey=CDS;gene=amlB;product=alpha-amylase;protein_id=NP_631084.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7805208	7806416	.	+	.	ID=id9120;Dbxref=GeneID:1102458;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 395.00%2C E-value 7.2e-115;gbkey=misc_feature;gene=amlB
NC_003888.3	RefSeq	gene	7807021	7808124	.	+	.	ID=gene7084;Dbxref=GeneID:1102459;Name=SC1H10.10;gbkey=Gene;gene=SC1H10.10;gene_biotype=protein_coding;gene_synonym=SC1H10.10;locus_tag=SCO7021
NC_003888.3	RefSeq	CDS	7807021	7808124	.	+	0	ID=cds6953;Parent=gene7084;Dbxref=Genbank:NP_631085.1,GeneID:1102459;Name=NP_631085.1;Note=SC1H10.10%2C possible hypothetical protein%2C len: 367 aa. Identical over available sequence to Streptomyces lividans TR: Q9ZAK1(EMBL:Y13601) hypothetical 26.8 KD protein (fragment) (250 aa)%2C fasta scores opt: 1497 z-score: 1387.0 E(): 0 96.8%25 identity in 250 aa overlap. Also highly similar to Streptomyces coelicolor TR:Q9XAE3(EMBL:AL079356) hypothetical protein%2C SC6G9.39 (391 aa)%2C fasta scores opt: 541 z-score: 507.7 E(): 7.4e-21 40.1%25 identity in 367 aa overlap. Contains a possible N-terminal signal sequence and a Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family. Also contains possible coiled-coils between residues 51..97 and 150..202.;gbkey=CDS;gene=SC1H10.10;product=hypothetical protein;protein_id=NP_631085.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7807801	7808115	.	+	.	ID=id9121;Dbxref=GeneID:1102459;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 96.60%2C E-value 4.9e-25;gbkey=misc_feature;gene=SC1H10.10
NC_003888.3	RefSeq	gene	7808129	7809061	.	+	.	ID=gene7085;Dbxref=GeneID:1102460;Name=SC1H10.11;gbkey=Gene;gene=SC1H10.11;gene_biotype=protein_coding;gene_synonym=SC1H10.11;locus_tag=SCO7022
NC_003888.3	RefSeq	CDS	7808129	7809061	.	+	0	ID=cds6954;Parent=gene7085;Dbxref=Genbank:NP_631086.1,GeneID:1102460;Name=NP_631086.1;Note=SC1H10.11%2C unknown%2C len: 310 aa.;gbkey=CDS;gene=SC1H10.11;product=hypothetical protein;protein_id=NP_631086.1;transl_table=11
NC_003888.3	RefSeq	gene	7809224	7810459	.	+	.	ID=gene7086;Dbxref=GeneID:1102461;Name=SC1H10.12;gbkey=Gene;gene=SC1H10.12;gene_biotype=protein_coding;gene_synonym=SC1H10.12;locus_tag=SCO7023
NC_003888.3	RefSeq	CDS	7809224	7810459	.	+	0	ID=cds6955;Parent=gene7086;Dbxref=Genbank:NP_631087.1,GeneID:1102461;Name=NP_631087.1;Note=SC1H10.12%2C unknown%2C len: 411 aa;gbkey=CDS;gene=SC1H10.12;product=hypothetical protein;protein_id=NP_631087.1;transl_table=11
NC_003888.3	RefSeq	gene	7810502	7811068	.	+	.	ID=gene7087;Dbxref=GeneID:1102462;Name=SC1H10.13;gbkey=Gene;gene=SC1H10.13;gene_biotype=protein_coding;gene_synonym=SC1H10.13;locus_tag=SCO7024
NC_003888.3	RefSeq	CDS	7810502	7811068	.	+	0	ID=cds6956;Parent=gene7087;Dbxref=Genbank:NP_631088.1,GeneID:1102462;Name=NP_631088.1;Note=SC1H10.13%2C possible acetyltransferase%2C len: 188 aa. Weakly similar to several acetyltransferases e.g. Streptomyces coelicolor TR:CAB59477(EMBL:AL132648) acetyltransferase%2C SCI41.07C (196 aa)%2C fasta scores opt: 186 z-score: 237.2 E(): 8.6e-0628.5%25 identity in 165 aa overlap.;gbkey=CDS;gene=SC1H10.13;product=acetyltransferase;protein_id=NP_631088.1;transl_table=11
NC_003888.3	RefSeq	gene	7811193	7812095	.	-	.	ID=gene7088;Dbxref=GeneID:1102463;Name=SC1H10.14c;gbkey=Gene;gene=SC1H10.14c;gene_biotype=protein_coding;gene_synonym=SC1H10.14c;locus_tag=SCO7025
NC_003888.3	RefSeq	CDS	7811193	7812095	.	-	0	ID=cds6957;Parent=gene7088;Dbxref=Genbank:NP_631089.1,GeneID:1102463;Name=NP_631089.1;Note=SC1H10.14c%2C probable LysR-family transcriptional regulator%2C len: 305 aa. Highly similar to the Streptomyces lividans TR:Q9ZI19 (EMBL:AF043654) LysR-type of transcriptional regulator%2C BxlS (300 aa)%2C fasta scores opt: 1743 z-score: 1937.0 E(): 0 91.0%25 identity in 300 aa overlap. Also similar to many other LysR-family transcriptional regulators e.g. Streptomyces coelicolor TR:O86805 (EMBL:AL031317)  transcriptional regulator%2C SC6G4.44 (306 aa)%2C fasta scores opt: 479 z-score: 538.0 E(): 1.5e-22 38.3%25 identity in 300 aa overlap. Contains a Prosite hit to PS00044 Bacterial regulatory proteins%2C lysR family signature and a Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family with the potential helix-turn-helix motif situated between residues 16..37 (+4.86 SD).;gbkey=CDS;gene=SC1H10.14c;product=LysR family transcriptional regulator;protein_id=NP_631089.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7811664	7812089	.	-	.	ID=id9122;Dbxref=GeneID:1102463;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 131.50%2C E-value 1.5e-35;gbkey=misc_feature;gene=SC1H10.14c
NC_003888.3	RefSeq	sequence_feature	7811955	7812047	.	-	.	ID=id9123;Dbxref=GeneID:1102463;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC1H10.14c
NC_003888.3	RefSeq	ribosome_entry_site	7812095	7812101	.	-	.	ID=id9124;gbkey=RBS
NC_003888.3	RefSeq	gene	7812182	7812625	.	+	.	ID=gene7089;Dbxref=GeneID:1102464;Name=SC1H10.15;gbkey=Gene;gene=SC1H10.15;gene_biotype=protein_coding;gene_synonym=SC1H10.15;locus_tag=SCO7026
NC_003888.3	RefSeq	CDS	7812182	7812625	.	+	0	ID=cds6958;Parent=gene7089;Dbxref=Genbank:NP_631090.1,GeneID:1102464;Name=NP_631090.1;Note=SC1H10.15%2C unknown%2C len: 147 aa. Similar to several proteins of unknown function e.g. Bacillus subtilis TR:O32183(EMBL:Z99120) hypothetical protein%2C YusQ (127 aa)%2C fasta scores opt: 227 z-score: 315.9 E(): 3.6e-10 27.9%25 identity in 122 aa overlap.;gbkey=CDS;gene=SC1H10.15;product=hypothetical protein;protein_id=NP_631090.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7812629	7812796	.	+	.	ID=id9125;Note=repeat region containing 3xCCTCGCCAGGCG(T/C)CCG(C/T)GCGGCTCCTCGTCA(T/C)GGGTCCG(T/C )G and 1xCCTCGTCAGGCGTCCGCGC repeats .;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7812783	7813802	.	-	.	ID=gene7090;Dbxref=GeneID:1102465;Name=SC1H10.16c;gbkey=Gene;gene=SC1H10.16c;gene_biotype=protein_coding;gene_synonym=SC1H10.16c;locus_tag=SCO7027
NC_003888.3	RefSeq	CDS	7812783	7813802	.	-	0	ID=cds6959;Parent=gene7090;Dbxref=Genbank:NP_631091.1,GeneID:1102465;Name=NP_631091.1;Note=SC1H10.16c%2C probable LacI-family transcriptional regulator%2C len: 339 aa. Highly similar to Streptomyces lividans TR:Q9ZI18 (EMBL:AF043654) LacI-GalR family regulatory protein%2C BxlR (338 aa)%2C fasta scores opt: 2136 z-score: 2395.5 E(): 0 96.5%25 identity in 340 aa overlap and Escherichia coli SW:CYTR_ECOLI (EMBL:X03683) transcriptional repressor%2C CytR (341 aa)%2C fasta scores opt: 553 z-score: 625.0 E(): 2.2e-27 32.7%25 identity in 330 aa overlap. Also highly similar to Streptomyces coelicolor TR:O86795(EMBL:AL031317) transcriptional regulator%2C SC6G4.32 (355 aa)%2C fasta scores opt: 1318 z-score: 1239.5 E():0 60.2%25 identity in 329 aa overlap. Contains a Prosite hit to PS00356 Bacterial regulatory proteins%2C lacI family signature and Pfam matches to entries PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family and entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family. Also contains a helix-turn-helix motif situated between residues 1..22 (+6.62 SD);gbkey=CDS;gene=SC1H10.16c;product=LacI family transcriptional regulator;protein_id=NP_631091.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7812918	7813646	.	-	.	ID=id9126;Dbxref=GeneID:1102465;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 88.40%2C E-value 1.4e-22;gbkey=misc_feature;gene=SC1H10.16c
NC_003888.3	RefSeq	sequence_feature	7813725	7813802	.	-	.	ID=id9127;Dbxref=GeneID:1102465;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 33.30%2C E-value 6.9e-08;gbkey=misc_feature;gene=SC1H10.16c
NC_003888.3	RefSeq	sequence_feature	7813740	7813796	.	-	.	ID=id9128;Dbxref=GeneID:1102465;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SC1H10.16c
NC_003888.3	RefSeq	ribosome_entry_site	7813812	7813817	.	-	.	ID=id9129;gbkey=RBS
NC_003888.3	RefSeq	repeat_region	7813949	7813959	.	+	.	ID=id9130;Note=inverted repeat sequence possibly involved in regulation.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	7813971	7815275	.	+	.	ID=gene7091;Dbxref=GeneID:1102466;Name=SC1H10.17;gbkey=Gene;gene=SC1H10.17;gene_biotype=protein_coding;gene_synonym=SC1H10.17;locus_tag=SCO7028
NC_003888.3	RefSeq	CDS	7813971	7815275	.	+	0	ID=cds6960;Parent=gene7091;Dbxref=Genbank:NP_631092.1,GeneID:1102466;Name=NP_631092.1;Note=SC1H10.17%2C possible sugar-binding lipoprotein%2C len: 434 aa. Identical to Streptomyces lividans TR:Q9Z492 (EMBL:AF043654)  sugar-binding protein%2C BxlE (434 aa)%2C fasta scores opt: 2892 z-score: 3295.8 E():0 99.5%25 identity in 434 aa overlap. Also similar to Streptococcus mutans SW:MSME_STRMU(EMBL:M77351) multiple sugar-binding protein precursor%2C MsmE (420 aa)%2C fasta scores opt: 308 z-score: 353.5 E(): 2.9e-12 24.0%25 identity in 383 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains a Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein.;gbkey=CDS;gene=SC1H10.17;product=sugar-binding lipoprotein;protein_id=NP_631092.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7814016	7814048	.	+	.	ID=id9131;Dbxref=GeneID:1102466;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC1H10.17
NC_003888.3	RefSeq	sequence_feature	7814388	7815269	.	+	.	ID=id9132;Dbxref=GeneID:1102466;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 78.20%2C E-value 1.7e-19;gbkey=misc_feature;gene=SC1H10.17
NC_003888.3	RefSeq	gene	7815286	7816242	.	+	.	ID=gene7092;Dbxref=GeneID:1102467;Name=SC1H10.18;gbkey=Gene;gene=SC1H10.18;gene_biotype=protein_coding;gene_synonym=SC1H10.18;locus_tag=SCO7029
NC_003888.3	RefSeq	CDS	7815286	7816242	.	+	0	ID=cds6961;Parent=gene7092;Dbxref=Genbank:NP_631093.1,GeneID:1102467;Name=NP_631093.1;Note=SC1H10.18%2C possible binding-protein-dependent transport protein%2C len: 318 aa. Almost identical to Streptomyces lividans TR:Q9ZI17 (EMBL:AF043654) permease%2C BxlF (317 aa)%2C fasta scores opt:2000 z-score: 2320.3 E():0 98.1%25 identity in 318 aa overlap. Also similar to Streptococcus mutans SW:MSMF_STRMU(EMBL:M77351) multiple sugar-binding transport system permease%2C MsmF (290 aa)%2C fasta scores opt: 447 z-score: 524.7 E(): 8.3e-22 29.9%25 identity in 271 aa overlap and Streptomyces coelicolor TR:CAB54176(EMBL:AL110470) binding-protein-dependent transport protein%2C SCF85.19 (300 aa)%2C fasta scores opt: 898 z-score: 1046.1 E():0 44.6%25 identity in 298 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC1H10.18;product=binding-protein-dependent transport protein;protein_id=NP_631093.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7815877	7816110	.	+	.	ID=id9133;Dbxref=GeneID:1102467;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 49.30%2C E-value 8.4e-11;gbkey=misc_feature;gene=SC1H10.18
NC_003888.3	RefSeq	ribosome_entry_site	7816227	7816231	.	+	.	ID=id9134;Dbxref=GeneID:1102467;gbkey=RBS;gene=SC1H10.18
NC_003888.3	RefSeq	gene	7816239	7817057	.	+	.	ID=gene7093;Dbxref=GeneID:1102468;Name=SC1H10.19;gbkey=Gene;gene=SC1H10.19;gene_biotype=protein_coding;gene_synonym=SC1H10.19;locus_tag=SCO7030
NC_003888.3	RefSeq	CDS	7816239	7817057	.	+	0	ID=cds6962;Parent=gene7093;Dbxref=Genbank:NP_631094.1,GeneID:1102468;Name=NP_631094.1;Note=SC1H10.19%2C possible binding-protein-dependent transport protein%2C len: 310 aa. Almost identical to Streptomyces lividans TR:Q9ZI16 (EMBL:AF043654) permease%2C BxlG (272 aa)%2C fasta scores opt: 1714 z-score: 2067.9 E():0 98.5%25 identity in 272 aa overlap. Also similar to Streptococcus mutans SW:MSMG_STRMU(EMBL:M77351) multiple sugar-binding transport system permease%2C MsmG (277 aa)%2C fasta scores opt: 441 z-score: 537.9 E(): 1.5e-22 28.0%25 identity in 254 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and multiple possible membrane spanning hydrophobic domains. Also contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC1H10.19;product=binding-protein-dependent transport protein;protein_id=NP_631094.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7816707	7816931	.	+	.	ID=id9135;Dbxref=GeneID:1102468;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 36.10%2C E-value 7.9e-07;gbkey=misc_feature;gene=SC1H10.19
NC_003888.3	RefSeq	ribosome_entry_site	7817046	7817050	.	+	.	ID=id9136;Dbxref=GeneID:1102468;gbkey=RBS;gene=SC1H10.19
NC_003888.3	RefSeq	gene	7817054	7819447	.	+	.	ID=gene7094;Dbxref=GeneID:1102469;Name=SC1H10.20;gbkey=Gene;gene=SC1H10.20;gene_biotype=protein_coding;gene_synonym=SC1H10.20;locus_tag=SCO7031
NC_003888.3	RefSeq	CDS	7817054	7819447	.	+	0	ID=cds6963;Parent=gene7094;Dbxref=Genbank:NP_631095.1,GeneID:1102469;Name=NP_631095.1;Note=SC1H10.20%2C beta-D-xylosidase%2C len: 797 aa. Highly similar to Streptomyces lividans TR:Q9ZI15 (EMBL:AF043654) beta-D-xylosidase%2C BxlA (861 aa)%2C fasta scores opt: 4473 z-score: 4774.4 E(): 0 89.2%25 identity in 789 aa overlap. Also highly similar to Streptomyces coelicolor TR:CAB55650(EMBL:AL117385) beta-xylosidase%2C SC5G9.02 (796 aa)%2C fasta scores opt: 4215 z-score: 4499.4 E(): 0 79.1%25 identity in 788 aa overlap. Contains a Pfam matches to entries PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain and Pfam match to entry PF01915 Glyco_hydro_3_C%2C Glycosyl hydrolase family 3 C terminal domain.;gbkey=CDS;gene=SC1H10.20;product=beta-D-xylosidase;protein_id=NP_631095.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7817120	7818091	.	+	.	ID=id9137;Dbxref=GeneID:1102469;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain%2C score 274.40%2C E-value 1.5e-78;gbkey=misc_feature;gene=SC1H10.20
NC_003888.3	RefSeq	sequence_feature	7818242	7818808	.	+	.	ID=id9138;Dbxref=GeneID:1102469;Note=Pfam match to entry PF01915 Glyco_hydro_3_C%2C Glycosyl hydrolase family 3 C terminal domain%2C score 133.20%2C E-value 4.7e-36;gbkey=misc_feature;gene=SC1H10.20
NC_003888.3	RefSeq	gene	7819501	7820142	.	-	.	ID=gene7095;Dbxref=GeneID:1102470;Name=SC1H10.21;gbkey=Gene;gene=SC1H10.21;gene_biotype=protein_coding;gene_synonym=SC1H10.21;locus_tag=SCO7032
NC_003888.3	RefSeq	CDS	7819501	7820142	.	-	0	ID=cds6964;Parent=gene7095;Dbxref=Genbank:NP_631096.1,GeneID:1102470;Name=NP_631096.1;Note=SC1H10.21%2C unknown%2C len: 213 aa. Similar to a protein of undefined function from Streptomyces coelicolor TR:Q9XBC6(EMBL:AL078635) hypothetical 22.9 KD protein (205 aa)%2C fasta scores opt: 950 z-score: 1149.9 E(): 0 71.6%25 identity in 201 aa overlap.;gbkey=CDS;gene=SC1H10.21;product=hypothetical protein;protein_id=NP_631096.1;transl_table=11
NC_003888.3	RefSeq	gene	7820139	7821806	.	-	.	ID=gene7096;Dbxref=GeneID:1102471;Name=SC1H10.22c;gbkey=Gene;gene=SC1H10.22c;gene_biotype=protein_coding;gene_synonym=SC1H10.22c;locus_tag=SCO7033
NC_003888.3	RefSeq	CDS	7820139	7821806	.	-	0	ID=cds6965;Parent=gene7096;Dbxref=Genbank:NP_631097.1,GeneID:1102471;Name=NP_631097.1;Note=SC1H10.22c%2C possible regulatory protein%2C len: 555 aa. Weakly similar to Streptomyces ambofaciens TR:Q00509(EMBL:X63451) polyketide synthase regulatory gene%2C SrmR (604 aa)%2C fasta scores opt: 252 z-score: 283.4 E(): 2.3e-08 27.0%25 identity in 470 aa overlap. Contains  helix-turn-helix motif situated between residues 494..515 (+5.41 SD).;gbkey=CDS;gene=SC1H10.22c;product=regulatory protein;protein_id=NP_631097.1;transl_table=11
NC_003888.3	RefSeq	gene	7821937	7823205	.	+	.	ID=gene7097;Dbxref=GeneID:1102472;Name=SC1H10.23;gbkey=Gene;gene=SC1H10.23;gene_biotype=protein_coding;gene_synonym=SC1H10.23,SC2C3.01;locus_tag=SCO7034
NC_003888.3	RefSeq	CDS	7821937	7823205	.	+	0	ID=cds6966;Parent=gene7097;Dbxref=Genbank:NP_733721.1,GeneID:1102472;Name=NP_733721.1;Note=SC2C3.01%2C probable aminotransferase%2C len: >275 aa%3B similar to SW:GABT_ECOL (EMBL:M88334) Escherichia coli 4-aminobutyrate aminotransferase (EC 2.6.1.19) GabT%2C 426 aa%3B fasta scores: opt: 634 z-score: 729.2 E(): 0%3B 40.8%25 identity in 233 aa overlap. Contains Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate and match to Prosite entry PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site~SC1H10.23%2C possible aminotransferase%2C partial CDS len: > 187 aa. Similar to Escherichia coli SW:ARGD_ECOLI (EMBL:M32796) acetylornithine aminotranferase (EC 2.6.1.11)%2C ArgD (405 aa)%2C fasta scores opt: 288 z-score:0.0 E(): 0.0 34.44%25 identity in 151 aa overlap. Also similar to many other aminotransferases e.g. Bacillus subtilis SW:GABT_BACSU(EMBL:D50453) probable 4-aminobutyrate aminotransferase (EC 2.6.1.19)%2C fasta scores opt:399 z-score: 483.6 E(): 1.7e-19 36.2%25 identity in 177 aa overlap. Contains a Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate.;gbkey=CDS;gene=SC1H10.23;product=aminotransferase;protein_id=NP_733721.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7821997	7822428	.	+	.	ID=id9139;Dbxref=GeneID:1102472;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 178.00%2C E-value 2.4e-61;gbkey=misc_feature;gene=SC1H10.23
NC_003888.3	RefSeq	sequence_feature	7822510	7823118	.	+	.	ID=id9140;Dbxref=GeneID:1102472;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 264.70%2C E-value 1.7e-91;gbkey=misc_feature;gene=SC1H10.23
NC_003888.3	RefSeq	sequence_feature	7822621	7822734	.	+	.	ID=id9141;Dbxref=GeneID:1102472;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SC1H10.23
NC_003888.3	RefSeq	ribosome_entry_site	7823261	7823268	.	+	.	ID=id9142;gbkey=RBS
NC_003888.3	RefSeq	gene	7823274	7824713	.	+	.	ID=gene7098;Dbxref=GeneID:1102473;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;gene_synonym=gabD,SC2C3.02,SC4G1.01;locus_tag=SCO7035
NC_003888.3	RefSeq	CDS	7823274	7824713	.	+	0	ID=cds6967;Parent=gene7098;Dbxref=Genbank:NP_733722.1,GeneID:1102473;Name=NP_733722.1;Note=SC2C3.02%2C gabD%2C succinate-semialdehyde dehydrogenase (fragment)%2C len: >422 aa%3B highly similar to SW:GABD_ECOLI (EMBL:M88334) Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) GabD%2C 482 aa%3B fasta scores: opt: 1329 z-score: 1466.8 E(): 0%3B 48.9%25 identity in 415 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family and match to Prosite entry PS00687 Aldehyde dehydrogenases glutamic acid active site~SC4G1.01%2C gabD%2C succinate-semialdehyde dehydrogenase (fragment)%2C len: >90 aa%3B similar to SW:GABD_ECOLI (EMBL:M88334) Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) GabD%2C 482 aa%3B fasta scores: opt: 320 z-score: 405.5 E(): 4.1e-15%3B 50.6%25 identity in 87 aa overlap;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=NP_733722.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7823310	7824536	.	+	.	ID=id9143;Dbxref=GeneID:1102473;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 416.60%2C E-value 2.3e-121;gbkey=misc_feature;gene=gabD
NC_003888.3	RefSeq	sequence_feature	7824021	7824044	.	+	.	ID=id9144;Dbxref=GeneID:1102473;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=gabD
NC_003888.3	RefSeq	sequence_feature	7824536	7826289	.	+	.	ID=id9145;Note=previously sequenced fragment. EMBL:D00799 Streptomyces coelicolor argG gene for argininosuccinate synthetase%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	7824771	7826216	.	+	.	ID=gene7099;Dbxref=GeneID:1102474;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;gene_synonym=argG,SC4G1.02;locus_tag=SCO7036
NC_003888.3	RefSeq	CDS	7824771	7826216	.	+	0	ID=cds6968;Parent=gene7099;Dbxref=Genbank:NP_631098.1,GeneID:1102474;Name=NP_631098.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;gene=argG;product=argininosuccinate synthase;protein_id=NP_631098.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7824813	7826027	.	+	.	ID=id9146;Dbxref=GeneID:1102474;Note=Pfam match to entry PF00764 Arginosuc_synth%2C Arginosuccinate synthase%2C score 737.20%2C E-value 1.6e-231;gbkey=misc_feature;gene=argG
NC_003888.3	RefSeq	sequence_feature	7824819	7824845	.	+	.	ID=id9147;Dbxref=GeneID:1102474;Note=PS00564 Argininosuccinate synthase signature 1;gbkey=misc_feature;gene=argG
NC_003888.3	RefSeq	sequence_feature	7825155	7825190	.	+	.	ID=id9148;Dbxref=GeneID:1102474;Note=PS00565 Argininosuccinate synthase signature 2;gbkey=misc_feature;gene=argG
NC_003888.3	RefSeq	stem_loop	7826252	7826291	.	+	.	ID=id9149;Note=possible stem loop. Score 57: 19/19 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	7826600	7826603	.	+	.	ID=id9150;gbkey=RBS
NC_003888.3	RefSeq	gene	7826610	7830005	.	+	.	ID=gene7100;Dbxref=GeneID:1102475;Name=SC4G1.03;gbkey=Gene;gene=SC4G1.03;gene_biotype=protein_coding;gene_synonym=SC4G1.03;locus_tag=SCO7037
NC_003888.3	RefSeq	CDS	7826610	7830005	.	+	0	ID=cds6969;Parent=gene7100;Dbxref=Genbank:NP_631099.1,GeneID:1102475;Name=NP_631099.1;Note=SC4G1.03%2C possible hypothetical protein%2C len: 1131 aa%3B similar to TR:CAB88148 (EMBL:AL352956) Streptomyces coelicolor  transmembrane protein SC1H10.04c%2C 1433 aa%3B fasta scores: opt: 1569 z-score: 1600.6 E(): 0%3B 36.4%25 identity in 1265 aa overlap. Contains possible cleavable N-terminal signal peptide sequence;gbkey=CDS;gene=SC4G1.03;product=hypothetical protein;protein_id=NP_631099.1;transl_table=11
NC_003888.3	RefSeq	gene	7830042	7832324	.	-	.	ID=gene7101;Dbxref=GeneID:1102476;Name=SC4G1.04c;gbkey=Gene;gene=SC4G1.04c;gene_biotype=protein_coding;gene_synonym=SC4G1.04c;locus_tag=SCO7038
NC_003888.3	RefSeq	CDS	7830042	7832324	.	-	0	ID=cds6970;Parent=gene7101;Dbxref=Genbank:NP_631100.1,GeneID:1102476;Name=NP_631100.1;Note=SC4G1.04c%2C possible integral membrane protein%2C len: 760 aa. Contains possible hydrophobic membrane spanning regions and cleavable N-terminal signal peptide sequence;gbkey=CDS;gene=SC4G1.04c;product=hypothetical protein;protein_id=NP_631100.1;transl_table=11
NC_003888.3	RefSeq	gene	7832321	7832713	.	-	.	ID=gene7102;Dbxref=GeneID:1102477;Name=SC4G1.05c;gbkey=Gene;gene=SC4G1.05c;gene_biotype=protein_coding;gene_synonym=SC4G1.05c;locus_tag=SCO7039
NC_003888.3	RefSeq	CDS	7832321	7832713	.	-	0	ID=cds6971;Parent=gene7102;Dbxref=Genbank:NP_631101.1,GeneID:1102477;Name=NP_631101.1;Note=SC4G1.05c%2C possible ABC transport system ATP-binding protein%2C len: 130 aa%3B similar to SW:DPPF_ECOLI (EMBL:L08399) Escherichia coli dipeptide transport ATP-binding protein DppF%2C 334 aa%3B fasta scores: opt: 177 z-score: 195.7 E(): 0.002%3B 42.9%25 identity in 70 aa overlap;gbkey=CDS;gene=SC4G1.05c;product=ABC transporter ATP-binding protein;protein_id=NP_631101.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7832713	7832757	.	-	.	ID=id9151;Note=possible stem loop. Score 57: 19/19 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7832790	7834235	.	-	.	ID=gene7103;Dbxref=GeneID:1102478;Name=gap2;gbkey=Gene;gene=gap2;gene_biotype=protein_coding;gene_synonym=gap2,SC4G1.06c;locus_tag=SCO7040
NC_003888.3	RefSeq	CDS	7832790	7834235	.	-	0	ID=cds6972;Parent=gene7103;Dbxref=Genbank:NP_631102.1,GeneID:1102478;Name=NP_631102.1;Note=catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate%3B involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium%3B NAD and NADP dependent;gbkey=CDS;gene=gap2;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=NP_631102.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7832823	7833854	.	-	.	ID=id9152;Dbxref=GeneID:1102478;Note=Pfam match to entry PF00044 gpdh%2C glyceraldehyde 3-phosphate dehydrogenases%2C score 423.30%2C E-value 6.7e-126;gbkey=misc_feature;gene=gap2
NC_003888.3	RefSeq	sequence_feature	7833354	7833377	.	-	.	ID=id9153;Dbxref=GeneID:1102478;Note=PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site;gbkey=misc_feature;gene=gap2
NC_003888.3	RefSeq	gene	7834447	7834857	.	+	.	ID=gene7104;Dbxref=GeneID:1102479;Name=SC4G1.07;gbkey=Gene;gene=SC4G1.07;gene_biotype=protein_coding;gene_synonym=SC4G1.07;locus_tag=SCO7041
NC_003888.3	RefSeq	CDS	7834447	7834857	.	+	0	ID=cds6973;Parent=gene7104;Dbxref=Genbank:NP_631103.1,GeneID:1102479;Name=NP_631103.1;Note=SC4G1.07%2C unknown%2C len: 136 aa. High content in alanine%2C leucine and aspartate amino acid residues;gbkey=CDS;gene=SC4G1.07;product=hypothetical protein;protein_id=NP_631103.1;transl_table=11
NC_003888.3	RefSeq	gene	7834891	7835298	.	-	.	ID=gene7105;Dbxref=GeneID:1102480;Name=SC4G1.08c;gbkey=Gene;gene=SC4G1.08c;gene_biotype=protein_coding;gene_synonym=SC4G1.08c;locus_tag=SCO7042
NC_003888.3	RefSeq	CDS	7834891	7835298	.	-	0	ID=cds6974;Parent=gene7105;Dbxref=Genbank:NP_631104.1,GeneID:1102480;Name=NP_631104.1;Note=SC4G1.08c%2C probable marR-family transcriptional regulator%2C len: 135 aa%3B similar to TR:Q9X8V0 (EMBL:AL049826) Streptomyces coelicolor transcriptional regulator SCH24.36c%2C 154 aa%3B fasta scores: opt: 252 z-score: 343.3 E(): 1.2e-11%3B 36.2%25 identity in 127 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and match to Prosite entry PS01117 Bacterial regulatory proteins%2C marR family signature. Also contains possible helix-turn-helix motif at residues 59..80 (+2.64 SD);gbkey=CDS;gene=SC4G1.08c;product=MarR family transcriptional regulator;protein_id=NP_631104.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7834918	7835190	.	-	.	ID=id9154;Dbxref=GeneID:1102480;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 34.50%2C E-value 2.5e-06;gbkey=misc_feature;gene=SC4G1.08c
NC_003888.3	RefSeq	sequence_feature	7834975	7835079	.	-	.	ID=id9155;Dbxref=GeneID:1102480;Note=PS01117 Bacterial regulatory proteins%2C marR family signature;gbkey=misc_feature;gene=SC4G1.08c
NC_003888.3	RefSeq	gene	7835383	7835715	.	+	.	ID=gene7106;Dbxref=GeneID:1102481;Name=SC4G1.09;gbkey=Gene;gene=SC4G1.09;gene_biotype=protein_coding;gene_synonym=SC4G1.09;locus_tag=SCO7043
NC_003888.3	RefSeq	CDS	7835383	7835715	.	+	0	ID=cds6975;Parent=gene7106;Dbxref=Genbank:NP_631105.1,GeneID:1102481;Name=NP_631105.1;Note=SC4G1.09%2C unknown%2C len: 110 aa. Highly hydrophilic;gbkey=CDS;gene=SC4G1.09;product=hypothetical protein;protein_id=NP_631105.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7835913	7835917	.	+	.	ID=id9156;gbkey=RBS
NC_003888.3	RefSeq	gene	7835928	7836392	.	+	.	ID=gene7107;Dbxref=GeneID:1102482;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;gene_synonym=SC4G1.10;locus_tag=SCO7044
NC_003888.3	RefSeq	CDS	7835928	7836392	.	+	0	ID=cds6976;Parent=gene7107;Dbxref=Genbank:NP_631106.1,GeneID:1102482;Name=NP_631106.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=NP_631106.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7836379	7836383	.	+	.	ID=id9157;Dbxref=GeneID:1102482;gbkey=RBS;gene=ccrB
NC_003888.3	RefSeq	gene	7836389	7836733	.	+	.	ID=gene7108;Dbxref=GeneID:1102483;Name=SC4G1.11;gbkey=Gene;gene=SC4G1.11;gene_biotype=protein_coding;gene_synonym=SC4G1.11;locus_tag=SCO7045
NC_003888.3	RefSeq	CDS	7836389	7836733	.	+	0	ID=cds6977;Parent=gene7108;Dbxref=Genbank:NP_631107.1,GeneID:1102483;Name=NP_631107.1;Note=SC4G1.11%2C hypothetical protein%2C len: 114 aa%3B similar to TR:O59172 (EMBL:AP000006) Pyrococcus horikoshii hypothetical 14.9 kDa protein PH1503%2C 130 aa%3B fasta scores: opt: 302 z-score: 405.0 E(): 4.3e-15%3B 41.0%25 identity in 100 aa overlap;gbkey=CDS;gene=SC4G1.11;product=hypothetical protein;protein_id=NP_631107.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7836720	7836724	.	+	.	ID=id9158;Dbxref=GeneID:1102483;gbkey=RBS;gene=SC4G1.11
NC_003888.3	RefSeq	gene	7836730	7837104	.	+	.	ID=gene7109;Dbxref=GeneID:1102484;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;gene_synonym=SC4G1.12;locus_tag=SCO7046
NC_003888.3	RefSeq	CDS	7836730	7837104	.	+	0	ID=cds6978;Parent=gene7109;Dbxref=Genbank:NP_631108.1,GeneID:1102484;Name=NP_631108.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=NP_631108.1;transl_table=11
NC_003888.3	RefSeq	gene	7837144	7837980	.	+	.	ID=gene7110;Dbxref=GeneID:1102485;Name=uppP;gbkey=Gene;gene=uppP;gene_biotype=protein_coding;gene_synonym=SC4G1.13;locus_tag=SCO7047
NC_003888.3	RefSeq	CDS	7837144	7837980	.	+	0	ID=cds6979;Parent=gene7110;Dbxref=Genbank:NP_631109.1,GeneID:1102485;Name=NP_631109.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;gene=uppP;product=UDP pyrophosphate phosphatase;protein_id=NP_631109.1;transl_table=11
NC_003888.3	RefSeq	gene	7838003	7839046	.	-	.	ID=gene7111;Dbxref=GeneID:1102486;Name=SC4G1.14c;gbkey=Gene;gene=SC4G1.14c;gene_biotype=protein_coding;gene_synonym=SC4G1.14c;locus_tag=SCO7048
NC_003888.3	RefSeq	CDS	7838003	7839046	.	-	0	ID=cds6980;Parent=gene7111;Dbxref=Genbank:NP_631110.1,GeneID:1102486;Name=NP_631110.1;Note=SC4G1.14c%2C probable delta fatty acid desaturase%2C len: 347 aa%3B similar to TR:Q9X8W4 (EMBL:AL078610) Streptomyces coelicolor  delta fatty acid desaturase SCH35.42c%2C 345 aa%3B fasta scores: opt: 1352 z-score: 1620.0 E(): 0%3B 60.1%25 identity in 343 aa overlap and to TR:Q9ZNW2 (EMBL:AJ22298) Physcomitrella patens delta 6-acyl-lipid desaturase Des6%2C 525 aa%3B fasta scores: opt: 425 z-score: 510.0 E(): 6.1e-21%3B 31.5%25 identity in 352 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4G1.14c;product=delta fatty acid desaturase;protein_id=NP_631110.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7839193	7839196	.	+	.	ID=id9159;gbkey=RBS
NC_003888.3	RefSeq	gene	7839207	7840130	.	+	.	ID=gene7112;Dbxref=GeneID:1102487;Name=SC4G1.15;gbkey=Gene;gene=SC4G1.15;gene_biotype=protein_coding;gene_synonym=SC4G1.15;locus_tag=SCO7049
NC_003888.3	RefSeq	CDS	7839207	7840130	.	+	0	ID=cds6981;Parent=gene7112;Dbxref=Genbank:NP_631111.1,GeneID:1102487;Name=NP_631111.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;gene=SC4G1.15;product=glutaminase;protein_id=NP_631111.1;transl_table=11
NC_003888.3	RefSeq	gene	7840162	7841403	.	-	.	ID=gene7113;Dbxref=GeneID:1102488;Name=SC4G1.16c;gbkey=Gene;gene=SC4G1.16c;gene_biotype=protein_coding;gene_synonym=SC4G1.16c;locus_tag=SCO7050
NC_003888.3	RefSeq	CDS	7840162	7841403	.	-	0	ID=cds6982;Parent=gene7113;Dbxref=Genbank:NP_631112.1,GeneID:1102488;Name=NP_631112.1;Note=SC4G1.16c%2C probable D-alanyl-D-alanine carboxypeptidase%2C len: 413 aa%3B similar to TR:CAB89066 (EMBL:AL353872) Streptomyces coelicolor D-alanyl-D-alanine carboxypeptidase SC5G8.15c%2C 424 aa%3B fasta scores: opt: 704 z-score: 719.2 E(): 1.4e-32%3B 47.7%25 identity in 390 aa overlap and to SW:DACF_BACSU (EMBL:M85047) Bacillus subtilis penicillin-binding protein DacF precursor%2C 389 aa%3B fasta scores: opt: 330 z-score: 341.5 E(): 1.5e-11%3B 27.1%25 identity in 262 aa overlap. Contains Pfam match to entry PF00768 Peptidase_S11%2C D-alanyl-D-alanine carboxypeptidase;gbkey=CDS;gene=SC4G1.16c;product=D-alanyl-D-alanine carboxypeptidase;protein_id=NP_631112.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7840369	7841172	.	-	.	ID=id9160;Dbxref=GeneID:1102488;Note=Pfam match to entry PF00768 Peptidase_S11%2C D-alanyl-D-alanine carboxypeptidase%2C score 145.90%2C E-value 7.2e-40;gbkey=misc_feature;gene=SC4G1.16c
NC_003888.3	RefSeq	gene	7841463	7842710	.	-	.	ID=gene7114;Dbxref=GeneID:1102489;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;gene_synonym=SC4G1.17c;locus_tag=SCO7051
NC_003888.3	RefSeq	CDS	7841463	7842710	.	-	0	ID=cds6983;Parent=gene7114;Dbxref=Genbank:NP_631113.1,GeneID:1102489;Name=NP_631113.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=NP_631113.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7841637	7842584	.	-	.	ID=id9161;Dbxref=GeneID:1102489;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C score -117.30%2C E-value 0.00076;gbkey=misc_feature;gene=rho
NC_003888.3	RefSeq	sequence_feature	7842180	7842203	.	-	.	ID=id9162;Dbxref=GeneID:1102489;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=rho
NC_003888.3	RefSeq	gene	7842905	7843300	.	-	.	ID=gene7115;Dbxref=GeneID:1102490;Name=SC4G1.18c;gbkey=Gene;gene=SC4G1.18c;gene_biotype=protein_coding;gene_synonym=SC4G1.18c;locus_tag=SCO7052
NC_003888.3	RefSeq	CDS	7842905	7843300	.	-	0	ID=cds6984;Parent=gene7115;Dbxref=Genbank:NP_631114.1,GeneID:1102490;Name=NP_631114.1;Note=SC4G1.18c%2C unknown%2C len: 131 aa;gbkey=CDS;gene=SC4G1.18c;product=hypothetical protein;protein_id=NP_631114.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7843311	7843318	.	-	.	ID=id9163;gbkey=RBS
NC_003888.3	RefSeq	gene	7843684	7844103	.	-	.	ID=gene7116;Dbxref=GeneID:1102491;Name=SC4G1.19c;gbkey=Gene;gene=SC4G1.19c;gene_biotype=protein_coding;gene_synonym=SC4G1.19c;locus_tag=SCO7053
NC_003888.3	RefSeq	CDS	7843684	7844103	.	-	0	ID=cds6985;Parent=gene7116;Dbxref=Genbank:NP_631115.1,GeneID:1102491;Name=NP_631115.1;Note=SC4G1.19c%2C hypothetical protein%2C len: 139 aa%3B similar to TR:O33283 (EMBL:AL008967) Mycobacterium tuberculosis hypothetical 16.6 kD protein%2C 149 aa%3B fasta scores: opt: 118 z-score: 161.0 E(): 0.17%3B 34.2%25 identity in 79 aa overlap;gbkey=CDS;gene=SC4G1.19c;product=hypothetical protein;protein_id=NP_631115.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7844109	7844114	.	-	.	ID=id9164;gbkey=RBS
NC_003888.3	RefSeq	gene	7844184	7844771	.	+	.	ID=gene7117;Dbxref=GeneID:1102492;Name=SC4G1.20;gbkey=Gene;gene=SC4G1.20;gene_biotype=protein_coding;gene_synonym=SC4G1.20;locus_tag=SCO7054
NC_003888.3	RefSeq	CDS	7844184	7844771	.	+	0	ID=cds6986;Parent=gene7117;Dbxref=Genbank:NP_631116.1,GeneID:1102492;Name=NP_631116.1;Note=SC4G1.20%2C conserved hypothetical protein%2C len: 195 aa%3B similar to TR:Q9X399 (EMBL:AF06544) Vibrio cholerae hypothetical 20.4 kD protein AphA%2C 179 aa%3B fasta scores: opt: 313 z-score: 386.3 E(): 4.8e-14%3B 32.4%25 identity in 185 aa overlap;gbkey=CDS;gene=SC4G1.20;product=hypothetical protein;protein_id=NP_631116.1;transl_table=11
NC_003888.3	RefSeq	gene	7844776	7845501	.	+	.	ID=gene7118;Dbxref=GeneID:1102493;Name=SC4G1.21;gbkey=Gene;gene=SC4G1.21;gene_biotype=protein_coding;gene_synonym=SC4G1.21;locus_tag=SCO7055
NC_003888.3	RefSeq	CDS	7844776	7845501	.	+	0	ID=cds6987;Parent=gene7118;Dbxref=Genbank:NP_631117.1,GeneID:1102493;Name=NP_631117.1;Note=SC4G1.21%2C possible methyltransferase%2C len: 241 aa%3B similar to TR:P72459 (EMBL:Y08763) Streptomyces griseus methyltransferase StsG%2C 253 aa%3B fasta scores: opt: 207 z-score: 238.8 E(): 7.8e-06%3B 34.1%25 identity in 138 aa overlap;gbkey=CDS;gene=SC4G1.21;product=methyltransferase;protein_id=NP_631117.1;transl_table=11
NC_003888.3	RefSeq	gene	7845511	7846272	.	-	.	ID=gene7119;Dbxref=GeneID:1102494;Name=SC4G1.22c;gbkey=Gene;gene=SC4G1.22c;gene_biotype=protein_coding;gene_synonym=SC4G1.22c;locus_tag=SCO7056
NC_003888.3	RefSeq	CDS	7845511	7846272	.	-	0	ID=cds6988;Parent=gene7119;Dbxref=Genbank:NP_631118.1,GeneID:1102494;Name=NP_631118.1;Note=SC4G1.22c%2C possible gntR-family transcriptional regulator%2C len: 253 aa%3B similar to TR:Q9RYU6 (EMBL:AE001863) Deinococcus radiodurans transcriptional regulator%2C gntR-family DRA0211%2C 279 aa%3B fasta scores: opt: 217 z-score: 236.0 E(): 1.1e-05%3B 37.6%25 identity in 141 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and match to Prosite entry PS00043 Bacterial regulatory proteins%2C gntR family signature. Also contains a possible helix-turn-helix at residues 47..68 (+4.70 SD);gbkey=CDS;gene=SC4G1.22c;product=GntR family transcriptional regulator;protein_id=NP_631118.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7846018	7846194	.	-	.	ID=id9165;Dbxref=GeneID:1102494;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 63.10%2C E-value 6.1e-18;gbkey=misc_feature;gene=SC4G1.22c
NC_003888.3	RefSeq	sequence_feature	7846063	7846137	.	-	.	ID=id9166;Dbxref=GeneID:1102494;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SC4G1.22c
NC_003888.3	RefSeq	ribosome_entry_site	7846279	7846285	.	-	.	ID=id9167;gbkey=RBS
NC_003888.3	RefSeq	gene	7846397	7847365	.	-	.	ID=gene7120;Dbxref=GeneID:1102495;Name=SC4G1.23c;gbkey=Gene;gene=SC4G1.23c;gene_biotype=protein_coding;gene_synonym=SC4G1.23c;locus_tag=SCO7057
NC_003888.3	RefSeq	CDS	7846397	7847365	.	-	0	ID=cds6989;Parent=gene7120;Dbxref=Genbank:NP_631119.1,GeneID:1102495;Name=NP_631119.1;Note=SC4G1.23c%2C possible esterase%2C len: 322 aa%3B similar to TR:O33842 (EMBL:U58632) Thermotoga neapolitana acetyl xylan esterase AxeA%2C 325 aa%3B fasta scores: opt: 1173 z-score: 1264.6 E(): 0%3B 54.2%25 identity in 321 aa overlap;gbkey=CDS;gene=SC4G1.23c;product=esterase;protein_id=NP_631119.1;transl_table=11
NC_003888.3	RefSeq	gene	7847483	7848067	.	-	.	ID=gene7121;Dbxref=GeneID:1102496;Name=SC4G1.24c;gbkey=Gene;gene=SC4G1.24c;gene_biotype=protein_coding;gene_synonym=SC4G1.24c;locus_tag=SCO7058
NC_003888.3	RefSeq	CDS	7847483	7848067	.	-	0	ID=cds6990;Parent=gene7121;Dbxref=Genbank:NP_631120.1,GeneID:1102496;Name=NP_631120.1;Note=SC4G1.24c%2C possible integral membrane protein%2C len: 194 aa%3B similar to TR:Q9RIY8 (EMBL:AL109962) Streptomyces coelicolor hypothetical 20.8 kD protein SCJ1.26%2C 193 aa%3B fasta scores: opt: 412 z-score: 478.0 E(): 3.7e-19%3B 38.8%25 identity in 183 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4G1.24c;product=hypothetical protein;protein_id=NP_631120.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7848072	7848077	.	-	.	ID=id9168;gbkey=RBS
NC_003888.3	RefSeq	gene	7848220	7848921	.	-	.	ID=gene7122;Dbxref=GeneID:1102497;Name=SC4G1.25c;gbkey=Gene;gene=SC4G1.25c;gene_biotype=protein_coding;gene_synonym=SC4G1.25c;locus_tag=SCO7059
NC_003888.3	RefSeq	CDS	7848220	7848921	.	-	0	ID=cds6991;Parent=gene7122;Dbxref=Genbank:NP_631121.1,GeneID:1102497;Name=NP_631121.1;Note=SC4G1.25c%2C possible oxidoreductase%2C len: 233 aa%3B similar to TR:Q51492 (EMBL:D84146) Pseudomonas aeruginosa reductase PahA%2C 328 aa%3B fasta scores: opt: 297 z-score: 346.1 E(): 8.3e-12%3B 32.0%25 identity in 203 aa overlap;gbkey=CDS;gene=SC4G1.25c;product=oxidoreductase;protein_id=NP_631121.1;transl_table=11
NC_003888.3	RefSeq	gene	7848995	7849600	.	-	.	ID=gene7123;Dbxref=GeneID:1102498;Name=SC4G1.26c;gbkey=Gene;gene=SC4G1.26c;gene_biotype=protein_coding;gene_synonym=SC4G1.26c;locus_tag=SCO7060
NC_003888.3	RefSeq	CDS	7848995	7849600	.	-	0	ID=cds6992;Parent=gene7123;Dbxref=Genbank:NP_631122.1,GeneID:1102498;Name=NP_631122.1;Note=SC4G1.26c%2C conserved hypothetical protein%2C len: 201 aa%3B similar to TR:Q9S2N1 (EMBL:AL109661) Streptomyces coelicolor hypothetical 24.3 kDa protein SC6E10.06c%2C 215 aa%3B fasta scores: opt: 540 z-score: 638.3 E(): 4.4e-28%3B 42.9%25 identity in 198 aa overlap;gbkey=CDS;gene=SC4G1.26c;product=hypothetical protein;protein_id=NP_631122.1;transl_table=11
NC_003888.3	RefSeq	gene	7849651	7850187	.	-	.	ID=gene7124;Dbxref=GeneID:1102499;Name=SC4G1.27c;gbkey=Gene;gene=SC4G1.27c;gene_biotype=protein_coding;gene_synonym=SC4G1.27c;locus_tag=SCO7061
NC_003888.3	RefSeq	CDS	7849651	7850187	.	-	0	ID=cds6993;Parent=gene7124;Dbxref=Genbank:NP_631123.1,GeneID:1102499;Name=NP_631123.1;Note=SC4G1.27c%2C probable marR-family transcriptional regulator%2C len: 178 aa%3B similar to SW:YXAD_BACSU (EMBL:AB005554) Bacillus subtilis hypothetical transcriptional regulator in AsnH-GntR intergenic region YxaD%2C 143 aa%3B fasta scores: opt: 242 z-score: 315.6 E(): 4.1e-10%3B 36.4%25 identity in 132 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and possible helix-turn-helix motif at residues 65..86 (+3.24 SD);gbkey=CDS;gene=SC4G1.27c;product=MarR family transcriptional regulator;protein_id=NP_631123.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7849735	7850046	.	-	.	ID=id9169;Dbxref=GeneID:1102499;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 79.00%2C E-value 9.6e-20;gbkey=misc_feature;gene=SC4G1.27c
NC_003888.3	RefSeq	ribosome_entry_site	7850192	7850197	.	-	.	ID=id9170;gbkey=RBS
NC_003888.3	RefSeq	gene	7850449	7851291	.	+	.	ID=gene7125;Dbxref=GeneID:1102500;Name=SC4G1.28;gbkey=Gene;gene=SC4G1.28;gene_biotype=protein_coding;gene_synonym=SC4G1.28;locus_tag=SCO7062
NC_003888.3	RefSeq	CDS	7850449	7851291	.	+	0	ID=cds6994;Parent=gene7125;Dbxref=Genbank:NP_631124.1,GeneID:1102500;Name=NP_631124.1;Note=SC4G1.28%2C possible methylase%2C len: 280 aa%3B similar to TR:P72542 (EMBL:U60417) Streptomyces pristinaespiralis PapM%2C 292 aa%3B fasta socres: opt: 401 z-score: 442.7 E(): 3.4e-17%3B 35.2%25 identity in 264 aa overlap and to SW:HEMK_ECOLI (EMBL:D28567) Escherichia coli HemK protein%2C 277 aa%3B fasta scores: opt: 299 z-score: 332.7 E(): 4.6e-11%3B 32.3%25 identity in 254 aa overlap;gbkey=CDS;gene=SC4G1.28;product=methylase;protein_id=NP_631124.1;transl_table=11
NC_003888.3	RefSeq	gene	7851281	7853389	.	-	.	ID=gene7126;Dbxref=GeneID:1102501;Name=SC4G1.29c;gbkey=Gene;gene=SC4G1.29c;gene_biotype=protein_coding;gene_synonym=SC4G1.29c;locus_tag=SCO7063
NC_003888.3	RefSeq	CDS	7851281	7853389	.	-	0	ID=cds6995;Parent=gene7126;Dbxref=Genbank:NP_631125.1,GeneID:1102501;Name=NP_631125.1;Note=SC4G1.29c%2C conserved hypothetical protein%2C len: 702 aa%3B similar to TR:Q9RJC6 (EMBL:AL133171) Streptomyces coelicolor hypothetical 89.7 kDa protein SCF81.26%2C 835 aa%3B fasta scores: opt: 1037 z-score: 1100.0 E(): 0%3B 40.3%25 identity in 683 aa overlap. Contains 3x Pfam matches to entry PF00989 PAS%2C PAS domain%2C Pfam match to entry PF01590 GAF%2C GAF domain;gbkey=CDS;gene=SC4G1.29c;product=hypothetical protein;protein_id=NP_631125.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7851323	7851403	.	-	.	ID=id9171;Dbxref=GeneID:1102501;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 0.30%2C E-value 1.9e+02;gbkey=misc_feature;gene=SC4G1.29c
NC_003888.3	RefSeq	sequence_feature	7852025	7852582	.	-	.	ID=id9172;Dbxref=GeneID:1102501;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 44.70%2C E-value 2.1e-09;gbkey=misc_feature;gene=SC4G1.29c
NC_003888.3	RefSeq	sequence_feature	7852775	7852966	.	-	.	ID=id9173;Dbxref=GeneID:1102501;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 16.00%2C E-value 0.0085;gbkey=misc_feature;gene=SC4G1.29c
NC_003888.3	RefSeq	sequence_feature	7853138	7853335	.	-	.	ID=id9174;Dbxref=GeneID:1102501;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 38.40%2C E-value 5.1e-09;gbkey=misc_feature;gene=SC4G1.29c
NC_003888.3	RefSeq	ribosome_entry_site	7853655	7853659	.	+	.	ID=id9175;gbkey=RBS
NC_003888.3	RefSeq	gene	7853666	7854562	.	+	.	ID=gene7127;Dbxref=GeneID:1102502;Name=SC4G1.30;gbkey=Gene;gene=SC4G1.30;gene_biotype=protein_coding;gene_synonym=SC4G1.30;locus_tag=SCO7064
NC_003888.3	RefSeq	CDS	7853666	7854562	.	+	0	ID=cds6996;Parent=gene7127;Dbxref=Genbank:NP_631126.1,GeneID:1102502;Name=NP_631126.1;Note=SC4G1.30%2C possible hypothetical protein%2C len: 298 aa. Contains possible N-terminal region signal peptide sequence%2C possibly cleavable;gbkey=CDS;gene=SC4G1.30;product=hypothetical protein;protein_id=NP_631126.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7854643	7854646	.	+	.	ID=id9176;gbkey=RBS
NC_003888.3	RefSeq	gene	7854655	7855026	.	+	.	ID=gene7128;Dbxref=GeneID:1102503;Name=SC4G1.31;gbkey=Gene;gene=SC4G1.31;gene_biotype=protein_coding;gene_synonym=SC4G1.31;locus_tag=SCO7065
NC_003888.3	RefSeq	CDS	7854655	7855026	.	+	0	ID=cds6997;Parent=gene7128;Dbxref=Genbank:NP_631127.1,GeneID:1102503;Name=NP_631127.1;Note=SC4G1.31%2C conserved hypothetical protein%2C len: 123 aa%3B similar to TR:Q9X7R3 (EMBL:AL049863) Streptomyces coelicolor hypothetical 11.4 kDa protein SC5H1.05%2C 117 aa%3B fasta scores: opt: 153 z-score: 212.5 E(): 0.00023%3B 37.1%25 identity in 116 aa overlap;gbkey=CDS;gene=SC4G1.31;product=hypothetical protein;protein_id=NP_631127.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7855055	7855094	.	+	.	ID=id9177;Note=possible stem loop. Score 60: 19/19 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	7855127	7855131	.	+	.	ID=id9178;gbkey=RBS
NC_003888.3	RefSeq	gene	7855137	7857152	.	+	.	ID=gene7129;Dbxref=GeneID:1102504;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;gene_synonym=fadH,SC4G1.32;locus_tag=SCO7066
NC_003888.3	RefSeq	CDS	7855137	7857152	.	+	0	ID=cds6998;Parent=gene7129;Dbxref=Genbank:NP_631128.1,GeneID:1102504;Name=NP_631128.1;Note=SC4G1.32%2C fadH%2C 2%2C4-dienoyl-CoA reductase [NADPH]%2C len: 671 aa%3B highly similar to SW:FADH_ECOLI (EMBL:U93405) Escherichia coli 2%2C4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) FadH%2C 671 aa%3B fasta scores: opt: 2871 z-score: 3039.3 E(): 0%3B 62.8%25 identity in 667 aa overlap. Contains Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=NP_631128.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7855152	7856132	.	+	.	ID=id9179;Dbxref=GeneID:1102504;Note=Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family%2C score 398.60%2C E-value 6e-116;gbkey=misc_feature;gene=fadH
NC_003888.3	RefSeq	ribosome_entry_site	7857211	7857214	.	+	.	ID=id9180;gbkey=RBS
NC_003888.3	RefSeq	gene	7857217	7857768	.	+	.	ID=gene7130;Dbxref=GeneID:1102505;Name=SC4G1.33;gbkey=Gene;gene=SC4G1.33;gene_biotype=protein_coding;gene_synonym=SC4G1.33;locus_tag=SCO7067
NC_003888.3	RefSeq	CDS	7857217	7857768	.	+	0	ID=cds6999;Parent=gene7130;Dbxref=Genbank:NP_631129.1,GeneID:1102505;Name=NP_631129.1;Note=SC4G1.33%2C hypothetical protein%2C len: 183 aa%3B similar to TR:Q9X399 (EMBL:AF065442) Vibrio cholerae hypothetical 20.4 kDa protein AphA%2C 179 aa%3B fasta scores: opt: 392 z-score: 485.9 E(): 1.3e-19%3B 35.4%25 identity in 178 aa overlap;gbkey=CDS;gene=SC4G1.33;product=hypothetical protein;protein_id=NP_631129.1;transl_table=11
NC_003888.3	RefSeq	gene	7857789	7858376	.	-	.	ID=gene7131;Dbxref=GeneID:1102506;Name=SC4G1.34c;gbkey=Gene;gene=SC4G1.34c;gene_biotype=protein_coding;gene_synonym=SC4G1.34c;locus_tag=SCO7068
NC_003888.3	RefSeq	CDS	7857789	7858376	.	-	0	ID=cds7000;Parent=gene7131;Dbxref=Genbank:NP_631130.1,GeneID:1102506;Name=NP_631130.1;Note=SC4G1.34c%2C possible hypothetical protein%2C len: 183 aa%3B similar to TR:CAB69767 (EMBL:AL137187) Streptomyces coelicolor  hypothetical protein SC7A8.18%2C 180 aa%3B fasta scores: opt: 171 z-score: 179.1 E(): 0.017%3B 32.8%25 identity in 192 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4G1.34c;product=hypothetical protein;protein_id=NP_631130.1;transl_table=11
NC_003888.3	RefSeq	gene	7858527	7859510	.	-	.	ID=gene7132;Dbxref=GeneID:1102507;Name=SC4G1.35c;gbkey=Gene;gene=SC4G1.35c;gene_biotype=protein_coding;gene_synonym=SC4G1.35c;locus_tag=SCO7069
NC_003888.3	RefSeq	CDS	7858527	7859510	.	-	0	ID=cds7001;Parent=gene7132;Dbxref=Genbank:NP_631131.1,GeneID:1102507;Name=NP_631131.1;Note=SC4G1.35c%2C possible  hydrolase%2C len: 327 aa%3B similar to SW:GUXB_CELFI (EMBL:L38827) Cellulomonas fimi exoglucanase B precursor (EC 3.2.1.91) CbhB%2C 1090 aa%3B fasta scores: opt: 384 z-score: 407.1 E(): 3.3e-15%3B 33.9%25 identity in 292 aa overlap and to TR:O54183 (EMBL:AL021411) Streptomyces coelicolor chitinase SC7H1.24%2C 765 aa%3B fasta scores: opt: 416 z-score: 443.1 E(): 3.2e-17%3B 40.3%25 identity in 201 aa overlap. Contains 2x Pfam matches to entry PF00041 fn3%2C Fibronectin type III domain and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4G1.35c;product=hydrolase;protein_id=NP_631131.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7858875	7859114	.	-	.	ID=id9181;Dbxref=GeneID:1102507;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 54.00%2C E-value 3.3e-12;gbkey=misc_feature;gene=SC4G1.35c
NC_003888.3	RefSeq	sequence_feature	7859163	7859393	.	-	.	ID=id9182;Dbxref=GeneID:1102507;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 59.40%2C E-value 7.9e-14;gbkey=misc_feature;gene=SC4G1.35c
NC_003888.3	RefSeq	sequence_feature	7859433	7859465	.	-	.	ID=id9183;Dbxref=GeneID:1102507;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4G1.35c
NC_003888.3	RefSeq	ribosome_entry_site	7859518	7859522	.	-	.	ID=id9184;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7859598	7859601	.	+	.	ID=id9185;gbkey=RBS
NC_003888.3	RefSeq	gene	7859605	7860771	.	+	.	ID=gene7133;Dbxref=GeneID:1102508;Name=SC4G1.36;gbkey=Gene;gene=SC4G1.36;gene_biotype=protein_coding;gene_synonym=SC4G1.36;locus_tag=SCO7070
NC_003888.3	RefSeq	CDS	7859605	7860771	.	+	0	ID=cds7002;Parent=gene7133;Dbxref=Genbank:NP_631132.1,GeneID:1102508;Name=NP_631132.1;Note=SC4G1.36%2C unknown%2C len: 388 aa. High content in alanine%2C arginine%2C glycine and proline amino acid residues. Also contains TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC4G1.36;product=hypothetical protein;protein_id=NP_631132.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7859629	7859631	.	+	.	ID=id9186;Dbxref=GeneID:1102508;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SC4G1.36
NC_003888.3	RefSeq	gene	7860829	7861221	.	-	.	ID=gene7134;Dbxref=GeneID:1102509;Name=SC4G1.37c;gbkey=Gene;gene=SC4G1.37c;gene_biotype=protein_coding;gene_synonym=SC4G1.37c;locus_tag=SCO7071
NC_003888.3	RefSeq	CDS	7860829	7861221	.	-	0	ID=cds7003;Parent=gene7134;Dbxref=Genbank:NP_631133.1,GeneID:1102509;Name=NP_631133.1;Note=SC4G1.37c%2C conserved hypothetical protein%2C len: 130 aa%3B similar to TR:Q9RZR3 (EMBL:AE001826) Deinococcus radiodurans conserved hypothetical protein DRB0052%2C 133 aa%3B fasta scores: opt: 250 z-score: 278.2 E(): 5e-08%3B 42.2%25 identity in 135 aa overlap;gbkey=CDS;gene=SC4G1.37c;product=hypothetical protein;protein_id=NP_631133.1;transl_table=11
NC_003888.3	RefSeq	gene	7861232	7861831	.	-	.	ID=gene7135;Dbxref=GeneID:1102510;Name=SC4G1.38c;gbkey=Gene;gene=SC4G1.38c;gene_biotype=protein_coding;gene_synonym=SC4G1.38c;locus_tag=SCO7072
NC_003888.3	RefSeq	CDS	7861232	7861831	.	-	0	ID=cds7004;Parent=gene7135;Dbxref=Genbank:NP_631134.1,GeneID:1102510;Name=NP_631134.1;Note=SC4G1.38c%2C hypothetical protein%2C len: 199 aa%3B similar to SW:YCGS_ECOLI (EMBL:AE000218) Escherichia coli hypothetical 22.6 kDa protein in TreA-Pth intergenic region YcgS%2C 210 aa%3B fasta scores: opt: 349 z-score: 387.3 E(): 4.2e-14%3B 44.5%25 identity in 200 aa overlap and to C-terminal region of SW:DAK1_YEAST (EMBL:Z38114) Saccharomyces cerevisiae dihydroxyacetone kinase 1 (EC 2.7.1.29) Dak1%2C 584 aa%3B fasta scores: opt: 298 z-score: 326.4 E(): 1e-10%3B 33.3%25 identity in 189 aa overlap;gbkey=CDS;gene=SC4G1.38c;product=hypothetical protein;protein_id=NP_631134.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7861837	7861840	.	-	.	ID=id9187;gbkey=RBS
NC_003888.3	RefSeq	gene	7861881	7862873	.	-	.	ID=gene7136;Dbxref=GeneID:1102511;Name=SC4G1.39c;gbkey=Gene;gene=SC4G1.39c;gene_biotype=protein_coding;gene_synonym=SC4G1.39c;locus_tag=SCO7073
NC_003888.3	RefSeq	CDS	7861881	7862873	.	-	0	ID=cds7005;Parent=gene7136;Dbxref=Genbank:NP_631135.1,GeneID:1102511;Name=NP_631135.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;gene=SC4G1.39c;product=dihydroxyacetone kinase subunit DhaK;protein_id=NP_631135.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7862880	7862883	.	-	.	ID=id9188;gbkey=RBS
NC_003888.3	RefSeq	gene	7863191	7863367	.	+	.	ID=gene7137;Dbxref=GeneID:1102512;Name=SC4G1.40;gbkey=Gene;gene=SC4G1.40;gene_biotype=protein_coding;gene_synonym=SC4G1.40;locus_tag=SCO7074
NC_003888.3	RefSeq	CDS	7863191	7863367	.	+	0	ID=cds7006;Parent=gene7137;Dbxref=Genbank:NP_631136.1,GeneID:1102512;Name=NP_631136.1;Note=SC4G1.40%2C possible membrane protein%2C len: 58 aa%3B similar to C-terminal region of TR:P96360 (EMBL:Z92539) Mycobacterium tuberculosis hypothetical 31.4 kDa protein%2C MTCY10G2.08 aa%3B fasta scores: opt: 213 z-score: 335.7 E(): 3.1e-11%3B 65.3%25 identity in 49 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4G1.40;product=hypothetical protein;protein_id=NP_631136.1;transl_table=11
NC_003888.3	RefSeq	gene	7863791	7864483	.	+	.	ID=gene7138;Dbxref=GeneID:1102513;Name=SC3A4.01;gbkey=Gene;gene=SC3A4.01;gene_biotype=protein_coding;gene_synonym=SC3A4.01;locus_tag=SCO7075
NC_003888.3	RefSeq	CDS	7863791	7864483	.	+	0	ID=cds7007;Parent=gene7138;Dbxref=Genbank:NP_631137.1,GeneID:1102513;Name=NP_631137.1;Note=SC3A4.01%2C two component response regulator protein%2C len: 230 aa. Highly similar to Pseudomonas syringae (pv. tomato) SW:COPR_PSESM (EMBL:L05176) transcriptional activator of copper resistance operon%2C CopR (227 aa) fasta scores%2C opt: 549 z-score: 653.7 E(): 5.9e-29 41.8%25 identity in 225 aa overlap and Synechococcus sp. (strain PCC 7942) (Anacystis nidulans R2)SW:SPHR_SYNP7(EMBL%3B D13172) response regulator of alkaline phosphatase%2C SphR (257 aa) fasta scores%2C opt: 554 z-score: 658.8 E(): 3.1e-29 40.8%25 identity in 233 aa overlap. Also similar to Streptomyces coelicolor SCD84.24c (248 aa)%2C fasta scores opt: 767 z-score: 776.3 E():0 51.7%25 identity in 238 aa overlap. Contains a Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and a Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal.;gbkey=CDS;gene=SC3A4.01;product=two component response regulator protein;protein_id=NP_631137.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7863791	7864135	.	+	.	ID=id9189;Dbxref=GeneID:1102513;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 135.60%2C E-value 9.1e-37;gbkey=misc_feature;gene=SC3A4.01
NC_003888.3	RefSeq	sequence_feature	7864241	7864456	.	+	.	ID=id9190;Dbxref=GeneID:1102513;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 72.10%2C E-value 3.2e-20;gbkey=misc_feature;gene=SC3A4.01
NC_003888.3	RefSeq	gene	7864480	7865931	.	+	.	ID=gene7139;Dbxref=GeneID:1102514;Name=SC3A4.02;gbkey=Gene;gene=SC3A4.02;gene_biotype=protein_coding;gene_synonym=SC3A4.02;locus_tag=SCO7076
NC_003888.3	RefSeq	CDS	7864480	7865931	.	+	0	ID=cds7008;Parent=gene7139;Dbxref=Genbank:NP_631138.1,GeneID:1102514;Name=NP_631138.1;Note=SC3A4.02%2C two-component histidine kinase%2C len: 483 aa. Similar in parts to Agrobacterium tumefaciens SW:CHVG_AGRTU(EMBL:L18860) two-component histidine kinase required for virulence (690 aa)%2C fasta scores%2C opt:399 z-score: 426.8 E(): 2.6e-16 33.1%25 identity in 357 aa overlap. Also similar to Streptomyces coelicolor SCD84.23c (481 aa)%2C fasta scores opt: 874 z-score: 748.4 E():0 39.8%25 identity in 480 aa overlap. Contains a Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins and a Pfam match to entry PF00512 signal%2C Histidine kinase. Contains probable membrane-spanning domain;gbkey=CDS;gene=SC3A4.02;product=two-component histidine kinase;protein_id=NP_631138.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7864981	7865193	.	+	.	ID=id9191;Dbxref=GeneID:1102514;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 55.80%2C E-value 9.4e-13;gbkey=misc_feature;gene=SC3A4.02
NC_003888.3	RefSeq	sequence_feature	7865233	7865868	.	+	.	ID=id9192;Dbxref=GeneID:1102514;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 167.90%2C E-value 1.6e-46;gbkey=misc_feature;gene=SC3A4.02
NC_003888.3	RefSeq	gene	7866148	7868298	.	-	.	ID=gene7140;Dbxref=GeneID:1102515;Name=SC3A4.03c;gbkey=Gene;gene=SC3A4.03c;gene_biotype=protein_coding;gene_synonym=SC3A4.03c;locus_tag=SCO7077
NC_003888.3	RefSeq	CDS	7866148	7868298	.	-	0	ID=cds7009;Parent=gene7140;Dbxref=Genbank:NP_631139.1,GeneID:1102515;Name=NP_631139.1;Note=SC3A4.03c%2C membrane protein len: 716 aa. Similar to multiple membrane proteins e.g. Streptomyces coelicolor SW:MMLA_STRCO(EMBL:M64683) membrane protein ActII-3 in the actinorhodin biosynthetic region (711 aa) fasta scores%2C opt: 1747 z-score: 1956.0 E():0 43.0%25 identity in 702 aa overlap. Contains probable membrane-spanning domains.;gbkey=CDS;gene=SC3A4.03c;product=hypothetical protein;protein_id=NP_631139.1;transl_table=11
NC_003888.3	RefSeq	gene	7868683	7869120	.	-	.	ID=gene7141;Dbxref=GeneID:1102516;Name=SC3A4.04c;gbkey=Gene;gene=SC3A4.04c;gene_biotype=protein_coding;gene_synonym=SC3A4.04c;locus_tag=SCO7078
NC_003888.3	RefSeq	CDS	7868683	7869120	.	-	0	ID=cds7010;Parent=gene7141;Dbxref=Genbank:NP_631140.1,GeneID:1102516;Name=NP_631140.1;Note=SC3A4.04c%2C possible insertion element transposase (fragment)%2C partial CDS%2C len: 145 aa. Similar to many transposases e.g. Streptomyces coelicolor TR:O69846(EMBL:AL023702) insertion element IS1647 transposase%2C SC1C3.04 (119 aa)%2C fasta scores opt: 340 z-score: 423.5 E(): 3.9e-16 44.1%25 identity in 111 aa overlap. Contains a Pfam match to entry PF01511 Transposase_6%2C Transposase.;end_range=7869120,.;gbkey=CDS;gene=SC3A4.04c;partial=true;product=insertion element transposase (fragment);protein_id=NP_631140.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7868782	7869012	.	-	.	ID=id9193;Dbxref=GeneID:1102516;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 4.50%2C E-value 0.00022;gbkey=misc_feature;gene=SC3A4.04c
NC_003888.3	RefSeq	gene	7869233	7869625	.	+	.	ID=gene7142;Dbxref=GeneID:1102517;Name=SC3A4.05;gbkey=Gene;gene=SC3A4.05;gene_biotype=pseudogene;gene_synonym=SC3A4.05;locus_tag=SCO7079;pseudo=true
NC_003888.3	RefSeq	sequence_feature	7869233	7869625	.	+	.	ID=id9194;Dbxref=PSEUDO:CAD55523.1,GeneID:1102517;Note=insertion element transposase (pseudogene).%3BSC3A4.05%2C insertion element transposase%2C pseudogene. Highly similar to Streptomyces flavopersicus TR:AAD45539(EMBL:U70376) transposase of IS1374%2C InsA (390 aa). This CDS contains at least two frameshifts with no obvious sites for ribosomal frameshifting.;gbkey=misc_feature;gene=SC3A4.05
NC_003888.3	RefSeq	gene	7869683	7870519	.	-	.	ID=gene7143;Dbxref=GeneID:1102518;Name=SC3A4.06c;gbkey=Gene;gene=SC3A4.06c;gene_biotype=protein_coding;gene_synonym=SC3A4.06c;locus_tag=SCO7080
NC_003888.3	RefSeq	CDS	7869683	7870519	.	-	0	ID=cds7011;Parent=gene7143;Dbxref=Genbank:NP_631141.1,GeneID:1102518;Name=NP_631141.1;Note=SC3A4.06c%2C possible insertion element transposase%2C len: 278 aa. Weakly similar to several transposases e.g. Fremyella diplosiphon SW:TRA2_FREDI(EMBL:X60384) probable transposase for insertion sequence element IS702 (276 aa)%2C fasta scores opt: 147 z-score: 180.3 E(): 0.014 23.3%25 identity in 240 aa overlap. Contains a helix-turn-helix motif situated between residues 50..71 (+3.28 SD). Contains a TTA/leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SC3A4.06c;product=insertion element transposase;protein_id=NP_631141.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7870058	7870060	.	-	.	ID=id9195;Dbxref=GeneID:1102518;Note=TTA/leucine codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SC3A4.06c
NC_003888.3	RefSeq	gene	7870734	7871921	.	-	.	ID=gene7144;Dbxref=GeneID:1102519;Name=SC3A4.07c;gbkey=Gene;gene=SC3A4.07c;gene_biotype=protein_coding;gene_synonym=SC3A4.07c;locus_tag=SCO7081
NC_003888.3	RefSeq	CDS	7870734	7871921	.	-	0	ID=cds7012;Parent=gene7144;Dbxref=Genbank:NP_631142.1,GeneID:1102519;Name=NP_631142.1;Note=SC3A4.07c%2C possible phospholipase%2C len: 395 aa. Similar to several including: Bacillus firmus TR:O66043(EMBL:U88888) cardiolipin synthase%2C ClS (503 aa)%2C fasta scores opt: 605 z-score: 748.2 E():0 31.8%25 identity in 377 aa overlap. Contains 2xPfam matches to entry PF00614 PLDc%2C Phospholipase D. Active site motif.;gbkey=CDS;gene=SC3A4.07c;product=phospholipase;protein_id=NP_631142.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7870917	7871000	.	-	.	ID=id9196;Dbxref=GeneID:1102519;Note=Pfam match to entry PF00614 PLDc%2C Phospholipase D. Active site motif%2C score 20.60%2C E-value 0.038;gbkey=misc_feature;gene=SC3A4.07c
NC_003888.3	RefSeq	sequence_feature	7871448	7871531	.	-	.	ID=id9197;Dbxref=GeneID:1102519;Note=Pfam match to entry PF00614 PLDc%2C Phospholipase D. Active site motif%2C score 11.80%2C E-value 3.3;gbkey=misc_feature;gene=SC3A4.07c
NC_003888.3	RefSeq	ribosome_entry_site	7871928	7871932	.	-	.	ID=id9198;gbkey=RBS
NC_003888.3	RefSeq	gene	7872043	7872507	.	-	.	ID=gene7145;Dbxref=GeneID:1102520;Name=SC3A4.08c;gbkey=Gene;gene=SC3A4.08c;gene_biotype=protein_coding;gene_synonym=SC3A4.08c;locus_tag=SCO7082
NC_003888.3	RefSeq	CDS	7872043	7872507	.	-	0	ID=cds7013;Parent=gene7145;Dbxref=Genbank:NP_631143.1,GeneID:1102520;Name=NP_631143.1;Note=SC3A4.08c%2C doubtful CDS%2C len: 154 aa.;gbkey=CDS;gene=SC3A4.08c;product=hypothetical protein;protein_id=NP_631143.1;transl_table=11
NC_003888.3	RefSeq	gene	7872697	7872801	.	-	.	ID=gene7146;Dbxref=GeneID:1102521;Name=SC3A4.09c;gbkey=Gene;gene=SC3A4.09c;gene_biotype=protein_coding;gene_synonym=SC3A4.09c;locus_tag=SCO7083
NC_003888.3	RefSeq	CDS	7872697	7872801	.	-	0	ID=cds7014;Parent=gene7146;Dbxref=Genbank:NP_631144.1,GeneID:1102521;Name=NP_631144.1;Note=SC3A4.09c%2C possible insertion element transposase (fragment)%2C partial CDS%2C len: 35 aa. Similar to Streptomyces coelicolor TR:CAB52966(EMBL:AL109950) transposase%2C SCJ4.32c (59 aa)%2C fasta scores opt:100 z-score: 199.9 E(): 0.0011 60.9%25 identity in 23 aa overlap.;end_range=7872801,.;gbkey=CDS;gene=SC3A4.09c;partial=true;product=insertion element transposase (fragment);protein_id=NP_631144.1;start_range=.,7872697;transl_table=11
NC_003888.3	RefSeq	gene	7872834	7872977	.	+	.	ID=gene7147;Dbxref=GeneID:1102522;Name=SC3A4.10;gbkey=Gene;gene=SC3A4.10;gene_biotype=protein_coding;gene_synonym=SC3A4.10;locus_tag=SCO7084
NC_003888.3	RefSeq	CDS	7872834	7872977	.	+	0	ID=cds7015;Parent=gene7147;Dbxref=Genbank:NP_631145.1,GeneID:1102522;Name=NP_631145.1;Note=SC3A4.10%2C doubtful CDS%2C len: 47 aa.;gbkey=CDS;gene=SC3A4.10;product=hypothetical protein;protein_id=NP_631145.1;transl_table=11
NC_003888.3	RefSeq	gene	7873167	7873427	.	+	.	ID=gene7148;Dbxref=GeneID:1102523;Name=SC3A4.11;gbkey=Gene;gene=SC3A4.11;gene_biotype=protein_coding;gene_synonym=SC3A4.11;locus_tag=SCO7085
NC_003888.3	RefSeq	CDS	7873167	7873427	.	+	0	ID=cds7016;Parent=gene7148;Dbxref=Genbank:NP_631146.1,GeneID:1102523;Name=NP_631146.1;Note=SC3A4.11%2C doubtful CDS%2C len: 86 aa.;gbkey=CDS;gene=SC3A4.11;product=hypothetical protein;protein_id=NP_631146.1;transl_table=11
NC_003888.3	RefSeq	gene	7873600	7873947	.	-	.	ID=gene7149;Dbxref=GeneID:1102524;Name=SC3A4.12c;gbkey=Gene;gene=SC3A4.12c;gene_biotype=protein_coding;gene_synonym=SC3A4.12c;locus_tag=SCO7086
NC_003888.3	RefSeq	CDS	7873600	7873947	.	-	0	ID=cds7017;Parent=gene7149;Dbxref=Genbank:NP_631147.1,GeneID:1102524;Name=NP_631147.1;Note=SC3A4.12c%2C possible MerR-family transcriptional regulator%2C len: 115 aa. Similar to many regulators including: Thiobacillus ferrooxidans SW:MERR_THIFE (EMBL:M57717) mercuric resistance operon regulatory protein (fragment) (122 aa)%2C fasta scores opt: 166 z-score: 229.9 E(): 2.4e-05 33.0%25 identity in 106 aa overlap. Conatins a Prosite hit to PS00552 Bacterial regulatory proteins%2C merR family signature and a Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family with a helix-turn-helix motif situated between residues 4..25 (+4.59 SD).;gbkey=CDS;gene=SC3A4.12c;product=MerR family transcriptional regulator;protein_id=NP_631147.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7873822	7873929	.	-	.	ID=id9199;Dbxref=GeneID:1102524;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 50.40%2C E-value 3.9e-11;gbkey=misc_feature;gene=SC3A4.12c
NC_003888.3	RefSeq	gene	7873970	7874908	.	-	.	ID=gene7150;Dbxref=GeneID:1102525;Name=SC3A4.13c;gbkey=Gene;gene=SC3A4.13c;gene_biotype=protein_coding;gene_synonym=SC3A4.13c;locus_tag=SCO7087
NC_003888.3	RefSeq	CDS	7873970	7874908	.	-	0	ID=cds7018;Parent=gene7150;Dbxref=Genbank:NP_631148.1,GeneID:1102525;Name=NP_631148.1;Note=SC3A4.13c%2C possible oxidoreductase%2C len: 312 aa. Similar to many including: Streptomyces coelicolor TR:CAB61562(EMBL:AL133171) aldo/keto reductase (fragment)%2C SCF81.28C (307 aa)%2C fasta scores opt: 351 z-score: 407.7 E():3e-15 30.7%25 identity in 309 aa overlap.;gbkey=CDS;gene=SC3A4.13c;product=oxidoreductase;protein_id=NP_631148.1;transl_table=11
NC_003888.3	RefSeq	gene	7875374	7876051	.	-	.	ID=gene7151;Dbxref=GeneID:1102526;Name=SC3A4.14c;gbkey=Gene;gene=SC3A4.14c;gene_biotype=protein_coding;gene_synonym=SC3A4.14c;locus_tag=SCO7088
NC_003888.3	RefSeq	CDS	7875374	7876051	.	-	0	ID=cds7019;Parent=gene7151;Dbxref=Genbank:NP_631149.1,GeneID:1102526;Name=NP_631149.1;Note=SC3A4.14c%2C two-component system response regulator%2C len: 225 aa. Similar to Escherichia coli SW:NARL_ECOLI(EMBL:X13360) nitrate/nitrite response regulator protein%2C NarL (216 aa)%2C fasta scores opt: 375 z-score:0.0 E(): 0.0 33.79%25 identity in 219 aa overlap. Also highly similar to multiple Streptomyces coelicolor two-component response regulators e.g. TR:CAB59718(EMBL:AL132707) SCF51.20C (219 aa)%2C fasta scores opt: 933 z-score: 1109.1 E():0 73.3%25 identity in 217 aa overlap. Contains a Prosite hits to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains Pfam matches to entries PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and PF00072 response_reg%2C Response regulator receiver domain with the helix-turn-helix motif situated between residues 174..195 (+3.75 SD).;gbkey=CDS;gene=SC3A4.14c;product=two-component system response regulator;protein_id=NP_631149.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7875389	7875586	.	-	.	ID=id9200;Dbxref=GeneID:1102526;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 87.90%2C E-value 2.1e-22;gbkey=misc_feature;gene=SC3A4.14c
NC_003888.3	RefSeq	sequence_feature	7875452	7875535	.	-	.	ID=id9201;Dbxref=GeneID:1102526;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC3A4.14c
NC_003888.3	RefSeq	sequence_feature	7875527	7875550	.	-	.	ID=id9202;Dbxref=GeneID:1102526;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3A4.14c
NC_003888.3	RefSeq	sequence_feature	7875698	7876045	.	-	.	ID=id9203;Dbxref=GeneID:1102526;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 109.20%2C E-value 7.8e-29;gbkey=misc_feature;gene=SC3A4.14c
NC_003888.3	RefSeq	gene	7876048	7877241	.	-	.	ID=gene7152;Dbxref=GeneID:1102527;Name=SC3A4.15c;gbkey=Gene;gene=SC3A4.15c;gene_biotype=protein_coding;gene_synonym=SC3A4.15c;locus_tag=SCO7089
NC_003888.3	RefSeq	CDS	7876048	7877241	.	-	0	ID=cds7020;Parent=gene7152;Dbxref=Genbank:NP_631150.1,GeneID:1102527;Name=NP_631150.1;Note=SC3A4.15c%2C probable two-component system sensor kinase%2C len: 397 aa. Highly similar to many including Escherichia coli SW:NARX_ECOLI (EMBL:X13360) nitrate/nitrite sensor protein NarX (598 aa)%2C fasta scores opt: 211 z-score:0.0 E(): 0.0 28.82%25 identity in 229 aa overlap and Streptomyces coelicolor TR:CAB59719 (EMBL:AL132707) two-component sensor kinase%2C SCF51.21C (397 aa)%2C fasta scores opt: 1075 z-score: 1237.2 E(): 0 48.0%25 identity in 400 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC3A4.15c;product=two-component system sensor kinase;protein_id=NP_631150.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7877249	7877252	.	-	.	ID=id9204;gbkey=RBS
NC_003888.3	RefSeq	gene	7877335	7879581	.	-	.	ID=gene7153;Dbxref=GeneID:1102528;Name=SC3A4.16c;gbkey=Gene;gene=SC3A4.16c;gene_biotype=protein_coding;gene_synonym=SC3A4.16c;locus_tag=SCO7090
NC_003888.3	RefSeq	CDS	7877335	7879581	.	-	0	ID=cds7021;Parent=gene7153;Dbxref=Genbank:NP_631151.1,GeneID:1102528;Name=NP_631151.1;Note=SC3A4.16c%2C possible integral membrane protein%2C len: 748 aa. Highly similar to several including: Streptomyces coelicolor TR:CAB59662(EMBL:AL132674) integral membrane transport protein%2C SCE87.17C (745 aa)%2C fasta scores opt: 2918 z-score: 3028.3 E():0 61.8%25 identity in 744 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC3A4.16c;product=hypothetical protein;protein_id=NP_631151.1;transl_table=11
NC_003888.3	RefSeq	gene	7879864	7880010	.	-	.	ID=gene7154;Dbxref=GeneID:1102529;Name=SC3A4.17c;gbkey=Gene;gene=SC3A4.17c;gene_biotype=protein_coding;gene_synonym=SC3A4.17c;locus_tag=SCO7091
NC_003888.3	RefSeq	CDS	7879864	7880010	.	-	0	ID=cds7022;Parent=gene7154;Dbxref=Genbank:NP_631152.1,GeneID:1102529;Name=NP_631152.1;Note=SC3A4.17c%2C doubtful CDS%2C len: 48 aa. Contains a TTA/leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SC3A4.17c;product=hypothetical protein;protein_id=NP_631152.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7879906	7879908	.	-	.	ID=id9205;Dbxref=GeneID:1102529;Note=TTA/leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC3A4.17c
NC_003888.3	RefSeq	gene	7880228	7881130	.	+	.	ID=gene7155;Dbxref=GeneID:1102530;Name=SC3A4.18;gbkey=Gene;gene=SC3A4.18;gene_biotype=protein_coding;gene_synonym=SC3A4.18;locus_tag=SCO7092
NC_003888.3	RefSeq	CDS	7880228	7881130	.	+	0	ID=cds7023;Parent=gene7155;Dbxref=Genbank:NP_631153.1,GeneID:1102530;Name=NP_631153.1;Note=SC3A4.18%2C possible hypothetical protein%2C len: 300 aa. Contains a possible N-terminal signal sequence. Contains a TTA/leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC3A4.18;product=hypothetical protein;protein_id=NP_631153.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7880303	7880305	.	+	.	ID=id9206;Dbxref=GeneID:1102530;Note=TTA/leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC3A4.18
NC_003888.3	RefSeq	gene	7881841	7884639	.	+	.	ID=gene7156;Dbxref=GeneID:1102531;Name=SC3A4.19;gbkey=Gene;gene=SC3A4.19;gene_biotype=protein_coding;gene_synonym=SC3A4.19;locus_tag=SCO7093
NC_003888.3	RefSeq	CDS	7881841	7884639	.	+	0	ID=cds7024;Parent=gene7156;Dbxref=Genbank:NP_631154.1,GeneID:1102531;Name=NP_631154.1;Note=SC3A4.19%2C possible transcriptional regulator%2C len: 932 aa. Highly similar to several including Streptomyces albus TR:Q53582(EMBL:U03114) transcriptional activator of the LipA promoter%2C LipR (890 aa)%2C fasta scores opt: 714 z-score: 762.7 E(): 0 30.3%25 identity in 922 aa overlap and Streptomyces coelicolor TR:CAB52359(EMBL:AL109747) probable transcriptional regulator%2C SCJ21.13 (919 aa)%2C fasta scores opt: 2398 z-score: 2564.6 E(): 0 48.0%25 identity in 911 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family with the  helix-turn-helix motif situated between residues 883..904 (+3.20 SD).;gbkey=CDS;gene=SC3A4.19;product=transcriptional regulator;protein_id=NP_631154.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7881982	7882005	.	+	.	ID=id9207;Dbxref=GeneID:1102531;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC3A4.19
NC_003888.3	RefSeq	sequence_feature	7884433	7884630	.	+	.	ID=id9208;Dbxref=GeneID:1102531;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 46.00%2C E-value 8.6e-10;gbkey=misc_feature;gene=SC3A4.19
NC_003888.3	RefSeq	gene	7884751	7885962	.	-	.	ID=gene7157;Dbxref=GeneID:1102532;Name=hmpA2;gbkey=Gene;gene=hmpA2;gene_biotype=protein_coding;gene_synonym=hmpA2;locus_tag=SCO7094
NC_003888.3	RefSeq	CDS	7884751	7885962	.	-	0	ID=cds7025;Parent=gene7157;Dbxref=Genbank:NP_631155.1,GeneID:1102532;Name=NP_631155.1;Note=SC3A4.20c%2C hmpA2%2C flavohemoprotein (hemoglobin-like protein)%2C len: 403 aa. Highly similar to many including: Escherichia coli SW:HMPA_ECOLI (EMBL:X58872) flavohemoprotein%2C HmpA (396 aa)%2C fasta scores: opt: 833 z-score: 947.5 E():0 37.9%25 identity in 406 aa overlap and Streptomyces coelicolor TR:CAB76347 (EMBL:AL158061) flavohemoprotein%2C HmpA1 or SC6D11.24 (398 aa)%2C fasta scores: opt: 1706 z-score: 1936.1 E(): 0 65.3%25 identity in 404 aa overlap. contains Pfam matches to entries PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain and PF00042 globin%2C Globin.;gbkey=CDS;gene=hmpA2;product=flavohemoprotein;protein_id=NP_631155.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7884826	7885164	.	-	.	ID=id9209;Dbxref=GeneID:1102532;Note=Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain%2C score 37.80%2C E-value 2.4e-07;gbkey=misc_feature;gene=hmpA2
NC_003888.3	RefSeq	sequence_feature	7885540	7885962	.	-	.	ID=id9210;Dbxref=GeneID:1102532;Note=Pfam match to entry PF00042 globin%2C Globin%2C score 63.10%2C E-value 8.1e-17;gbkey=misc_feature;gene=hmpA2
NC_003888.3	RefSeq	gene	7886126	7887082	.	-	.	ID=gene7158;Dbxref=GeneID:1102533;Name=SC3A4.21c;gbkey=Gene;gene=SC3A4.21c;gene_biotype=protein_coding;gene_synonym=SC3A4.21c;locus_tag=SCO7095
NC_003888.3	RefSeq	CDS	7886126	7887082	.	-	0	ID=cds7026;Parent=gene7158;Dbxref=Genbank:NP_631156.1,GeneID:1102533;Name=NP_631156.1;Note=SC3A4.21c%2C possible hydrolase. len: 318 aa. Similar in parts to several e.g. Moraxella sp. SW:DEH1_MORSP(EMBL:D90422) haloacetate dehalogenase H-1 (EC 3.8.1.3) (294 aa)%2C fasta scores opt: 245 z-score: 286.4 E(): 1.7e-08 37.4%25 identity in 131 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SC3A4.21c;product=hydrolase;protein_id=NP_631156.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7886165	7886866	.	-	.	ID=id9211;Dbxref=GeneID:1102533;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 55.00%2C E-value 1.7e-12;gbkey=misc_feature;gene=SC3A4.21c
NC_003888.3	RefSeq	gene	7887321	7887665	.	+	.	ID=gene7159;Dbxref=GeneID:1102534;Name=SC3A4.22;gbkey=Gene;gene=SC3A4.22;gene_biotype=protein_coding;gene_synonym=SC3A4.22;locus_tag=SCO7096
NC_003888.3	RefSeq	CDS	7887321	7887665	.	+	0	ID=cds7027;Parent=gene7159;Dbxref=Genbank:NP_631157.1,GeneID:1102534;Name=NP_631157.1;Note=SC3A4.22%2C possible membrane protein%2C len: 114 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC3A4.22;product=hypothetical protein;protein_id=NP_631157.1;transl_table=11
NC_003888.3	RefSeq	gene	7887694	7888284	.	-	.	ID=gene7160;Dbxref=GeneID:1102535;Name=SC3A4.23c;gbkey=Gene;gene=SC3A4.23c;gene_biotype=protein_coding;gene_synonym=SC3A4.23c;locus_tag=SCO7097
NC_003888.3	RefSeq	CDS	7887694	7888284	.	-	0	ID=cds7028;Parent=gene7160;Dbxref=Genbank:NP_631158.1,GeneID:1102535;Name=NP_631158.1;Note=SC3A4.23c%2C possible MarR-family regulator protein%2C len: 196 aa. Similar to several including: Erwinia chrysanthemi SW:PECS_ERWCH (EMBL:X74409) regulatory protein%2C PecS (166 aa)%2C fasta scores opt: 359 z-score: 425.8 E(): 2.9e-16 38.8%25 identity in 170 aa overlap and Streptomyces coelicolor TR:CAB71822 (EMBL:AL138662) MarR-family regulatory protein%2C SC8E4A.17 (172 aa)%2C fasta scores opt: 359 z-score: 425.8 E(): 2.9e-16 38.8%25 identity in 170 aa overlap. Contains a Pfam match to entry PF01047 MarR%2C MarR family.;gbkey=CDS;gene=SC3A4.23c;product=MarR family regulatory protein;protein_id=NP_631158.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7887721	7888041	.	-	.	ID=id9212;Dbxref=GeneID:1102535;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 68.10%2C E-value 1.8e-16;gbkey=misc_feature;gene=SC3A4.23c
NC_003888.3	RefSeq	gene	7888577	7889113	.	-	.	ID=gene7161;Dbxref=GeneID:1102536;Name=SC3A4.24c;gbkey=Gene;gene=SC3A4.24c;gene_biotype=protein_coding;gene_synonym=SC3A4.24c;locus_tag=SCO7098
NC_003888.3	RefSeq	CDS	7888577	7889113	.	-	0	ID=cds7029;Parent=gene7161;Dbxref=Genbank:NP_631159.1,GeneID:1102536;Name=NP_631159.1;Note=SC3A4.24c%2C unknown%2C len: 178 aa. Weakly similar to another hypothetical protein from Streptomyces coelicolor: TR:CAB52889(EMBL:AL109949) SCJ11.04 (195 aa)%2C fasta scores opt: 122 z-score: 143.6 E(): 1.5 29.2%25 identity in 154 aa overlap. Contains a possible coiled-coil region between residues 28..57.;gbkey=CDS;gene=SC3A4.24c;product=hypothetical protein;protein_id=NP_631159.1;transl_table=11
NC_003888.3	RefSeq	gene	7889266	7890168	.	-	.	ID=gene7162;Dbxref=GeneID:1102537;Name=SC3A4.25c;gbkey=Gene;gene=SC3A4.25c;gene_biotype=protein_coding;gene_synonym=SC3A4.25c;locus_tag=SCO7099
NC_003888.3	RefSeq	CDS	7889266	7890168	.	-	0	ID=cds7030;Parent=gene7162;Dbxref=Genbank:NP_631160.1,GeneID:1102537;Name=NP_631160.1;Note=SC3A4.25c%2C possible RNA polymerase sigma factor%2C len: 300 aa. Similar to many sigma factors from Streptomyces coelicolor e.g. TR:CAB60158 (EMBL:AL132824) SCAH10.04C (322 aa)%2C fasta scores opt: 427 z-score: 505.7 E(): 1e-20 36.5%25 identity in 307 aa overlap and TR:CAB59711 (EMBL:AL132707) SCF51.13C (298 aa)%2C fasta scores opt: 445 z-score: 527.2 E(): 6.6e-22 38.6%25 identity in 298 aa overlap.;gbkey=CDS;gene=SC3A4.25c;product=RNA polymerase sigma factor;protein_id=NP_631160.1;transl_table=11
NC_003888.3	RefSeq	gene	7890426	7891208	.	+	.	ID=gene7163;Dbxref=GeneID:1102538;Name=SC4B10.01;gbkey=Gene;gene=SC4B10.01;gene_biotype=protein_coding;gene_synonym=SC4B10.01;locus_tag=SCO7100
NC_003888.3	RefSeq	CDS	7890426	7891208	.	+	0	ID=cds7031;Parent=gene7163;Dbxref=Genbank:NP_631161.1,GeneID:1102538;Name=NP_631161.1;Note=SC4B10.01%2C probable oxidoreductase%2C len: 260 aa%3B similar to TR:Q9RK83 (EMBL:AL132662) Streptomyces coelicolor possible oxidoreductase SCF11.06%2C 277 aa%3B fasta scores: opt: 208 z-score: 258.9 E(): 5.9e-07%3B 25.5%25 identity in 243 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold;gbkey=CDS;gene=SC4B10.01;product=oxidoreductase;protein_id=NP_631161.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7890549	7891187	.	+	.	ID=id9213;Dbxref=GeneID:1102538;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 27.70%2C E-value 7.8e-05;gbkey=misc_feature;gene=SC4B10.01
NC_003888.3	RefSeq	ribosome_entry_site	7891296	7891299	.	+	.	ID=id9214;gbkey=RBS
NC_003888.3	RefSeq	gene	7891305	7892660	.	+	.	ID=gene7164;Dbxref=GeneID:1102539;Name=SC4B10.02;gbkey=Gene;gene=SC4B10.02;gene_biotype=protein_coding;gene_synonym=SC4B10.02;locus_tag=SCO7101
NC_003888.3	RefSeq	CDS	7891305	7892660	.	+	0	ID=cds7032;Parent=gene7164;Dbxref=Genbank:NP_631162.1,GeneID:1102539;Name=NP_631162.1;Note=SC4B10.02%2C probable dehydrogenase%2C len: 451 aa%3B similar to SW:DHNA_ECOLI (EMBL:V00306) Escherichia coli NADH dehydrogenase (EC 1.6.99.3) Ndh%2C 433 aa%3B fasta scores: opt: 472 z-score: 552.4 E(): 2.7e-23%3B 31.6%25 identity in 377 aa overlap;gbkey=CDS;gene=SC4B10.02;product=dehydrogenase;protein_id=NP_631162.1;transl_table=11
NC_003888.3	RefSeq	gene	7892704	7893258	.	-	.	ID=gene7165;Dbxref=GeneID:1102540;Name=SC4B10.03c;gbkey=Gene;gene=SC4B10.03c;gene_biotype=protein_coding;gene_synonym=SC4B10.03c;locus_tag=SCO7102
NC_003888.3	RefSeq	CDS	7892704	7893258	.	-	0	ID=cds7033;Parent=gene7165;Dbxref=Genbank:NP_631163.1,GeneID:1102540;Name=NP_631163.1;Note=SC4B10.03c%2C conserved hypothetical protein%2C len: 184 aa%3B similar to TR:CAB89770 (EMBL:AL354616) Streptomyces coelicolor hypothetical 19.1 kD protein SC3A4.24c%2C 178 aa%3B fasta scores: opt: 394 z-score: 403.2 E(): 5.4e-15%3B 55.5%25 identity in 182 aa overlap. Contains a coiled-coil region at approx. residues 18..45;gbkey=CDS;gene=SC4B10.03c;product=hypothetical protein;protein_id=NP_631163.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7893264	7893267	.	-	.	ID=id9215;gbkey=RBS
NC_003888.3	RefSeq	gene	7893453	7893752	.	-	.	ID=gene7166;Dbxref=GeneID:1102541;Name=SC4B10.04c;gbkey=Gene;gene=SC4B10.04c;gene_biotype=protein_coding;gene_synonym=SC4B10.04c;locus_tag=SCO7103
NC_003888.3	RefSeq	CDS	7893453	7893752	.	-	0	ID=cds7034;Parent=gene7166;Dbxref=Genbank:NP_631164.1,GeneID:1102541;Name=NP_631164.1;Note=SC4B10.04c%2C unknown%2C len: 99 aa. Highly hydrophilic. Contains a possible coiled-coil regions at approx%2C residues 41..59;gbkey=CDS;gene=SC4B10.04c;product=hypothetical protein;protein_id=NP_631164.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7894185	7894189	.	+	.	ID=id9216;gbkey=RBS
NC_003888.3	RefSeq	gene	7894195	7895073	.	+	.	ID=gene7167;Dbxref=GeneID:1102542;Name=SC4B10.05;gbkey=Gene;gene=SC4B10.05;gene_biotype=protein_coding;gene_synonym=SC4B10.05;locus_tag=SCO7104
NC_003888.3	RefSeq	CDS	7894195	7895073	.	+	0	ID=cds7035;Parent=gene7167;Dbxref=Genbank:NP_631165.1,GeneID:1102542;Name=NP_631165.1;Note=SC4B10.05%2C possible RNA polymerase sigma factor%2C len: 292 aa%3B similar to TR:CAB89771 (EMBL:AL354616) Streptomyces coelicolor  RNA polymerase sigma factor SC3A4.25c%2C 300 aa%3B fasta scores: opt: 901 z-score: 941.4 E(): 0%3B 51.7%25 identity in 290 aa overlap;gbkey=CDS;gene=SC4B10.05;product=RNA polymerase sigma factor;protein_id=NP_631165.1;transl_table=11
NC_003888.3	RefSeq	gene	7895116	7896021	.	-	.	ID=gene7168;Dbxref=GeneID:1102543;Name=SC4B10.06c;gbkey=Gene;gene=SC4B10.06c;gene_biotype=protein_coding;gene_synonym=SC4B10.06c;locus_tag=SCO7105
NC_003888.3	RefSeq	CDS	7895116	7896021	.	-	0	ID=cds7036;Parent=gene7168;Dbxref=Genbank:NP_631166.1,GeneID:1102543;Name=NP_631166.1;Note=SC4B10.06c%2C possible RNA polymerase sigma factor%2C len: 301 aa%3B similar to TR:Q9S1V5 (EMBL:AL109950) Streptomyces coelicolor  sigma factor SCJ24.18c%2C 250 aa%3B fasta scores: opt: 877 z-score: 1049.7 E(): 0%3B 54.7%25 identity in 236 aa overlap and to Streptomyces coelicolor St4B10.13c%2C 298%3B fasta scores: opt: 1112 z-score: 1131.2 E(): 0%3B 57.3%25 identity in 288 aa overlap. Also contains a possible helix-turn-helix motif at residues 133..154 (+3.38 SD);gbkey=CDS;gene=SC4B10.06c;product=RNA polymerase sigma factor;protein_id=NP_631166.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7896030	7896033	.	-	.	ID=id9217;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7896411	7896416	.	+	.	ID=id9218;gbkey=RBS
NC_003888.3	RefSeq	gene	7896424	7896690	.	+	.	ID=gene7169;Dbxref=GeneID:1102544;Name=SC4B10.07;gbkey=Gene;gene=SC4B10.07;gene_biotype=protein_coding;gene_synonym=SC4B10.07;locus_tag=SCO7106
NC_003888.3	RefSeq	CDS	7896424	7896690	.	+	0	ID=cds7037;Parent=gene7169;Dbxref=Genbank:NP_631167.1,GeneID:1102544;Name=NP_631167.1;Note=SC4B10.07%2C conserved hypothetical protein%2C len: 88 aa%3B similar to TR:Q9X952 (EMBL:AJ239087) Streptomyces coelicolor hypothetical 9.7 kDa protein WblE%2C 85 aa%3B fasta scores: opt: 382 z-score: 525.6 E(): 8.3e-22%3B 59.1%25 identity in 88 aa overlap and to TR:CAB93744 (EMBL:AL357613) Streptomyces coelicolor regulatory protein SC5F8.16c%2C 83 aa%3B fasta scores: opt: 368 z-score: 507.1 E(): 8.8e-21%3B 61.9%25 identity in 84 aa overlap;gbkey=CDS;gene=SC4B10.07;product=hypothetical protein;protein_id=NP_631167.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7896611	7896838	.	-	.	ID=id9219;Note=possible stem loop. Score 66: 46/58 (79%25) matches%2C 2 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7896813	7897409	.	-	.	ID=gene7170;Dbxref=GeneID:1102545;Name=SC4B10.08c;gbkey=Gene;gene=SC4B10.08c;gene_biotype=protein_coding;gene_synonym=SC4B10.08c;locus_tag=SCO7107
NC_003888.3	RefSeq	CDS	7896813	7897409	.	-	0	ID=cds7038;Parent=gene7170;Dbxref=Genbank:NP_631168.1,GeneID:1102545;Name=NP_631168.1;Note=SC4B10.08c%2C conserved hypothetical protein%2C len: 198 aa%3B similar to TR:O86515 (EMBL:AL031124) Streptomyces coelicolor hypothetical 20.0 kDa protein SC1C2.14c%2C 185 aa%3B fasta scores: opt: 698 z-score: 894.2 E(): 0%3B 56.9%25 identity in 174 aa overlap;gbkey=CDS;gene=SC4B10.08c;product=hypothetical protein;protein_id=NP_631168.1;transl_table=11
NC_003888.3	RefSeq	gene	7897518	7898264	.	-	.	ID=gene7171;Dbxref=GeneID:1102546;Name=SC4B10.09c;gbkey=Gene;gene=SC4B10.09c;gene_biotype=protein_coding;gene_synonym=SC4B10.09c;locus_tag=SCO7108
NC_003888.3	RefSeq	CDS	7897518	7898264	.	-	0	ID=cds7039;Parent=gene7171;Dbxref=Genbank:NP_631169.1,GeneID:1102546;Name=NP_631169.1;Note=SC4B10.09c%2C conserved hypothetical protein%2C len: 248 aa%3B similar to TR:Q9S1U9 (EMBL:AL109950) Streptomyces coelicolor hypothetical 25.2 kD protein SCJ4.24c%2C 242 aa%3B fasta scores: opt: 725 z-score: 841.0 E(): 0%3B 47.8%25 identity in 245 aa overlap%2C to TR:CAC01591 (EMBL:AL391041) Streptomyces coelicolor hypothetical protein SC8A11.19c%2C 269 aa%3B fasta scores: opt: 1213 z-score: 1236.7 E(): 0%3B 74.2%25 identity in 248 aa overlap and to TR:Q98LL5 (EMBL:AP002996) Rhizobium loti MLR0977 protein%2C 252 aa%3B fasta scores: opt: 944 Z-score: 1074.9 E(): 3.1e-52%3B 58.607%25 identity in 244 aa overlap;gbkey=CDS;gene=SC4B10.09c;product=hypothetical protein;protein_id=NP_631169.1;transl_table=11
NC_003888.3	RefSeq	gene	7898419	7900149	.	-	.	ID=gene7172;Dbxref=GeneID:1102547;Name=SC4B10.10c;gbkey=Gene;gene=SC4B10.10c;gene_biotype=protein_coding;gene_synonym=SC4B10.10c;locus_tag=SCO7109
NC_003888.3	RefSeq	CDS	7898419	7900149	.	-	0	ID=cds7040;Parent=gene7172;Dbxref=Genbank:NP_631170.1,GeneID:1102547;Name=NP_631170.1;Note=SC4B10.10c%2C possible oxidoreductase%2C len: 576 aa%3B similar to TR:O27546 (EMBL:AE000910) Methanobacterium thermoautotrophicum succinate dehydrogenase%2C flavoprotein subunit MTH1502%2C 558 aa%3B fasta scores: opt: 1262 z-score: 1392.4 E(): 0%3B 41.0%25 identity in 542 aa overlap and to TR:O53141 (EMBL:AJ000941) Methanobacterium thermoautotrophicum strain marburg%2C thiol:fumarate reductase subunit A Tfr%2C 545 aa%3B fasta scores: opt: 1184 z-score: 1306.6 E(): 0%3B 40.5%25 identity in 536 aa overlap. Contains Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain;gbkey=CDS;gene=SC4B10.10c;product=oxidoreductase;protein_id=NP_631170.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7898863	7899819	.	-	.	ID=id9220;Dbxref=GeneID:1102547;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 414.00%2C E-value 1.4e-120;gbkey=misc_feature;gene=SC4B10.10c
NC_003888.3	RefSeq	ribosome_entry_site	7900155	7900158	.	-	.	ID=id9221;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7900311	7900315	.	+	.	ID=id9222;gbkey=RBS
NC_003888.3	RefSeq	gene	7900323	7900712	.	+	.	ID=gene7173;Dbxref=GeneID:1102548;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;gene_synonym=fdxA,SC4B10.11;locus_tag=SCO7110
NC_003888.3	RefSeq	CDS	7900323	7900712	.	+	0	ID=cds7041;Parent=gene7173;Dbxref=Genbank:NP_631171.1,GeneID:1102548;Name=NP_631171.1;Note=SC4B10.11%2C fdxA%2C ferredoxin%2C len: 129 aa%3B highly similar to SW:FER_STRGR (EMBL:S08287) Streptomyces griseus ferredoxin 7Fe%2C 105 aa%3B fasta scores: opt: 510 z-score: 644.4 E(): 2e-28%3B 64.4%25 identity in 104 aa overlap. Contains Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain and match to Prosite entry PS00190 Cytochrome c family heme-binding site signature and PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=fdxA;product=ferredoxin;protein_id=NP_631171.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7900419	7900490	.	+	.	ID=id9223;Dbxref=GeneID:1102548;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 31.90%2C E-value 1.5e-05;gbkey=misc_feature;gene=fdxA
NC_003888.3	RefSeq	sequence_feature	7900440	7900475	.	+	.	ID=id9224;Dbxref=GeneID:1102548;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=fdxA
NC_003888.3	RefSeq	sequence_feature	7900440	7900457	.	+	.	ID=id9225;Dbxref=GeneID:1102548;Note=PS00190 Cytochrome c family heme-binding site signature;gbkey=misc_feature;gene=fdxA
NC_003888.3	RefSeq	gene	7900740	7901153	.	-	.	ID=gene7174;Dbxref=GeneID:1102549;Name=SC4B10.12c;gbkey=Gene;gene=SC4B10.12c;gene_biotype=protein_coding;gene_synonym=SC4B10.12c;locus_tag=SCO7111
NC_003888.3	RefSeq	CDS	7900740	7901153	.	-	0	ID=cds7042;Parent=gene7174;Dbxref=Genbank:NP_631172.1,GeneID:1102549;Name=NP_631172.1;Note=SC4B10.12c%2C probable hydroperoxide resistance protein%2C len: 137 aa%3B similar to SW:OHR_XANCH (EMBL:AF036166) Xanthomonas campestris organic hydroperoxide resistance protein Ohr%2C 142 aa%3B fasta scores: opt: 341 z-score: 437.5 E(): 6.6e-17%3B 47.1%25 identity in 138 aa overlap;gbkey=CDS;gene=SC4B10.12c;product=hydroperoxide resistance protein;protein_id=NP_631172.1;transl_table=11
NC_003888.3	RefSeq	gene	7901360	7902256	.	-	.	ID=gene7175;Dbxref=GeneID:1102550;Name=SC4B10.13c;gbkey=Gene;gene=SC4B10.13c;gene_biotype=protein_coding;gene_synonym=SC4B10.13c;locus_tag=SCO7112
NC_003888.3	RefSeq	CDS	7901360	7902256	.	-	0	ID=cds7043;Parent=gene7175;Dbxref=Genbank:NP_631173.1,GeneID:1102550;Name=NP_631173.1;Note=SC4B10.13c%2C probable ECF-family RNA polymerase sigma factor%2C len: 298 aa%3B similar to TR:Q9S1V5 (EMBL:AL109950) Streptomyces coelicolor sigma factor SCJ24.18c%2C 250 aa%3B fasta scores: opt: 1127 z-score: 1362.0 E(): 0%3B 72.8%25 identity in 243 aa overlap and to Streptomyces coelicolor SC4B10.06c%2C 301 aa%3B fasta scores: opt: 1112 z-score: 1158.1 E(): 0%3B 57.3%25 identity in 288 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=SC4B10.13c;product=ECF family RNA polymerase sigma factor;protein_id=NP_631173.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7902020	7902181	.	-	.	ID=id9226;Dbxref=GeneID:1102550;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 13.20%2C E-value 0.0037;gbkey=misc_feature;gene=SC4B10.13c
NC_003888.3	RefSeq	gene	7902488	7903123	.	+	.	ID=gene7176;Dbxref=GeneID:1102551;Name=SC4B10.14;gbkey=Gene;gene=SC4B10.14;gene_biotype=protein_coding;gene_synonym=SC4B10.14;locus_tag=SCO7113
NC_003888.3	RefSeq	CDS	7902488	7903123	.	+	0	ID=cds7044;Parent=gene7176;Dbxref=Genbank:NP_631174.1,GeneID:1102551;Name=NP_631174.1;Note=SC4B10.14%2C possible integral membrane protein%2C len: 211 aa%3B similar to TR:Q9RCU9 (EMBL:AL136149) Streptomyces coelicolor  integral membrane protein SCM2.15c%2C 219 aa%3B fasta scores: opt: 239 z-score: 284.5 E(): 2.2e-08%3B 34.5%25 identity in 220 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4B10.14;product=hypothetical protein;protein_id=NP_631174.1;transl_table=11
NC_003888.3	RefSeq	gene	7903130	7904521	.	-	.	ID=gene7177;Dbxref=GeneID:1102552;Name=SC4B10.15c;gbkey=Gene;gene=SC4B10.15c;gene_biotype=protein_coding;gene_synonym=SC4B10.15c;locus_tag=SCO7114
NC_003888.3	RefSeq	CDS	7903130	7904521	.	-	0	ID=cds7045;Parent=gene7177;Dbxref=Genbank:NP_631175.1,GeneID:1102552;Name=NP_631175.1;Note=SC4B10.15c%2C conserved hypothetical protein%2C len: 463 aa%3B similar to TR:Q9ZN74 (EMBL:AB022095) Streptomyces griseus ORF3 protein%2C 456 aa%3B fasta scores: opt: 828 z-score: 929.7 E(): 0%3B 38.5%25 identity in 470 aa overlap;gbkey=CDS;gene=SC4B10.15c;product=hypothetical protein;protein_id=NP_631175.1;transl_table=11
NC_003888.3	RefSeq	gene	7904521	7905621	.	-	.	ID=gene7178;Dbxref=GeneID:1102553;Name=SC4B10.16c;gbkey=Gene;gene=SC4B10.16c;gene_biotype=protein_coding;gene_synonym=SC4B10.16c;locus_tag=SCO7115
NC_003888.3	RefSeq	CDS	7904521	7905621	.	-	0	ID=cds7046;Parent=gene7178;Dbxref=Genbank:NP_631176.1,GeneID:1102553;Name=NP_631176.1;Note=SC4B10.16c%2C conserved hypothetical protein%2C len: 366 aa%3B similar to TR:Q9ZN75 (EMBL:AB022095) Streptomyces griseus ORF2 protein%2C 352 aa%3B fasta scores: opt: 941 z-score: 1090.4 E(): 0%3B 44.1%25 identity in 356 aa overlap. Contains match to Prosite entry PS00455  AMP-binding domain signature;gbkey=CDS;gene=SC4B10.16c;product=hypothetical protein;protein_id=NP_631176.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7904532	7904535	.	-	.	ID=id9227;Dbxref=GeneID:1102553;gbkey=RBS;gene=SC4B10.16c
NC_003888.3	RefSeq	sequence_feature	7905310	7905345	.	-	.	ID=id9228;Dbxref=GeneID:1102553;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC4B10.16c
NC_003888.3	RefSeq	ribosome_entry_site	7905628	7905632	.	-	.	ID=id9229;gbkey=RBS
NC_003888.3	RefSeq	gene	7905713	7906456	.	-	.	ID=gene7179;Dbxref=GeneID:1102554;Name=SC4B10.17c;gbkey=Gene;gene=SC4B10.17c;gene_biotype=protein_coding;gene_synonym=SC4B10.17c;locus_tag=SCO7116
NC_003888.3	RefSeq	CDS	7905713	7906456	.	-	0	ID=cds7047;Parent=gene7179;Dbxref=Genbank:NP_631177.1,GeneID:1102554;Name=NP_631177.1;Note=SC4B10.17c%2C conserved hypothetical protein%2C len: 247 aa%3B highly similar to TR:Q9RD73 (EMBL:AL136502) Streptomyces coelicolor hypothetical 27.0 kD protein SCF43.15c%2C 247 aa%3B fasta scores: opt: 1219 z-score: 1467.5 E(): 0%3B 71.6%25 identity in 250 aa overlap;gbkey=CDS;gene=SC4B10.17c;product=hypothetical protein;protein_id=NP_631177.1;transl_table=11
NC_003888.3	RefSeq	gene	7906453	7907715	.	-	.	ID=gene7180;Dbxref=GeneID:1102555;Name=SC4B10.18c;gbkey=Gene;gene=SC4B10.18c;gene_biotype=protein_coding;gene_synonym=SC4B10.18c;locus_tag=SCO7117
NC_003888.3	RefSeq	CDS	7906453	7907715	.	-	0	ID=cds7048;Parent=gene7180;Dbxref=Genbank:NP_631178.1,GeneID:1102555;Name=NP_631178.1;Note=SC4B10.18c%2C probable ferredoxin reductase%2C len: 420 aa%3B similar to TR:BAA94714 (EMBL:AB031319) Nocardioides sp. ferredoxin reductase PhdD%2C 414 aa%3B fasta scores: opt: 928 z-score: 1051.4 E(): 0%3B 40.0%25 identity in 420 aa overlap%2C to SW:THCD_RHOER (EMBL:U17130) Rhodococcus erythropolis rhodocoxin reductase (EC 1.18.1.-) ThcD%2C 426aa%3B fasta scores: opt: 853 z-score: 966.6 E(): 0%3B 39.5%25 identity in 370 aa overlap and to TR:CAB69757 (EMBL:AL137187) Streptomyces coelicolor reductase SC7A8.08c%2C 421 aa%3B fasta scores: opt: 830 z-score: 732.2 E(): 0%3B 50.8%25 identity in 415 aa overlap. Contains Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase;gbkey=CDS;gene=SC4B10.18c;product=ferredoxin reductase;protein_id=NP_631178.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7906464	7906467	.	-	.	ID=id9230;Dbxref=GeneID:1102555;gbkey=RBS;gene=SC4B10.18c
NC_003888.3	RefSeq	sequence_feature	7906876	7907697	.	-	.	ID=id9231;Dbxref=GeneID:1102555;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 280.30%2C E-value 4.9e-82;gbkey=misc_feature;gene=SC4B10.18c
NC_003888.3	RefSeq	gene	7907864	7908628	.	-	.	ID=gene7181;Dbxref=GeneID:1102556;Name=SC4B10.19c;gbkey=Gene;gene=SC4B10.19c;gene_biotype=protein_coding;gene_synonym=SC4B10.19c;locus_tag=SCO7118
NC_003888.3	RefSeq	CDS	7907864	7908628	.	-	0	ID=cds7049;Parent=gene7181;Dbxref=Genbank:NP_631179.1,GeneID:1102556;Name=NP_631179.1;Note=SC4B10.19c%2C unknown%2C len: 254 aa;gbkey=CDS;gene=SC4B10.19c;product=hypothetical protein;protein_id=NP_631179.1;transl_table=11
NC_003888.3	RefSeq	gene	7908808	7909746	.	+	.	ID=gene7182;Dbxref=GeneID:1102557;Name=SC4B10.20;gbkey=Gene;gene=SC4B10.20;gene_biotype=protein_coding;gene_synonym=SC4B10.20;locus_tag=SCO7119
NC_003888.3	RefSeq	CDS	7908808	7909746	.	+	0	ID=cds7050;Parent=gene7182;Dbxref=Genbank:NP_631180.1,GeneID:1102557;Name=NP_631180.1;Note=SC4B10.20%2C probable dehydrogenase%2C len: 312 aa%3B similar to SW:SERA_METJA (EMBL:U67544) Methanococcus jannaschii D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) SerA%2C 524 aa%3B fasta scores: opt: 407 z-score: 451.9 E(): 1e-17%3B 31.6%25 identity in 266 aa overlap and to TR:CAB37585 (EMBL:AL035569) Streptomyces coelicolor oxidoreductase SC8D9.21c%2C 313 aa%3B fasta scores: opt: 1071 z-score: 988.6 E(): 0%3B 56.0%25 identity in 307 aa overlap. Contains Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases and match to Prosite entry PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3;gbkey=CDS;gene=SC4B10.20;product=dehydrogenase;protein_id=NP_631180.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7909111	7909638	.	+	.	ID=id9232;Dbxref=GeneID:1102557;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenases%2C score 138.70%2C E-value 1.7e-56;gbkey=misc_feature;gene=SC4B10.20
NC_003888.3	RefSeq	sequence_feature	7909462	7909512	.	+	.	ID=id9233;Dbxref=GeneID:1102557;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3;gbkey=misc_feature;gene=SC4B10.20
NC_003888.3	RefSeq	gene	7910084	7911703	.	+	.	ID=gene7183;Dbxref=GeneID:1102558;Name=qrcB2;gbkey=Gene;gene=qrcB2;gene_biotype=protein_coding;gene_synonym=qrcB2,SC4B10.21;locus_tag=SCO7120
NC_003888.3	RefSeq	CDS	7910084	7911703	.	+	0	ID=cds7051;Parent=gene7183;Dbxref=Genbank:NP_631181.1,GeneID:1102558;Name=NP_631181.1;Note=SC4B10.21%2C qcrB2%2C ubiquinol-cytochrome C reductase cytochrome B subunit%2C len: 539 aa%3B similar to SW:QCRB_STRCO (EMBL:AL049497) Streptomyces coelicolor ubiquinol-cytochrome C reductase cytochrome B subunit QcrB or SC6G10.21c%2C 545 aa%3B fasta scores: opt: 2311 z-score: 2220.7 E(): 0%3B 59.4%25 identity in 537 aa overlap and to SW:QCRB_STRLI (EMBL:AF107888) Streptomyces lividans ubiquinol-cytochrome C reductase cytochrome B subunit QcrB%2C 549 aa%3B fasta scores: opt: 2148 z-score: 2064.6 E(): 0%3B 56.3%25 identity in 542 aa overlap. Contains Pfam match to entry PF00033 cytochrome_b_N%2C Cytochrome b(N-terminal)/b6/petB. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=qrcB2;product=ubiquinol-cytochrome C reductase cytochrome B subunit;protein_id=NP_631181.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7910132	7910806	.	+	.	ID=id9234;Dbxref=GeneID:1102558;Note=Pfam match to entry PF00033 cytochrome_b_N%2C Cytochrome b(N-terminal)/b6/petB%2C score 54.60%2C E-value 2.1e-12;gbkey=misc_feature;gene=qrcB2
NC_003888.3	RefSeq	gene	7911841	7912686	.	+	.	ID=gene7184;Dbxref=GeneID:1102559;Name=SC4B10.22;gbkey=Gene;gene=SC4B10.22;gene_biotype=protein_coding;gene_synonym=SC4B10.22;locus_tag=SCO7121
NC_003888.3	RefSeq	CDS	7911841	7912686	.	+	0	ID=cds7052;Parent=gene7184;Dbxref=Genbank:NP_631182.1,GeneID:1102559;Name=NP_631182.1;Note=SC4B10.22%2C possible hypothetical protein%2C len: 281 aa%3B similar to TR:Q9S1Z1 (EMBL:AL109747) Streptomyces coelicolor hypothetical 24.6 kDa protein SCJ21.16%2C 239 aa%3B fasta scores: opt: 989 z-score: 1075.6 E(): 0%3B 64.4%25 identity in 233 aa overlap and to Streptomyces coelicolor SC4B10.33%2C 239 aa%3B fasta scores: opt: 1034 z-score: 972.0 E(): 0%3B 67.0%25 identity in 233 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4B10.22;product=hypothetical protein;protein_id=NP_631182.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7912780	7912784	.	+	.	ID=id9235;gbkey=RBS
NC_003888.3	RefSeq	gene	7912792	7913283	.	+	.	ID=gene7185;Dbxref=GeneID:1102560;Name=SC4B10.23;gbkey=Gene;gene=SC4B10.23;gene_biotype=protein_coding;gene_synonym=SC4B10.23;locus_tag=SCO7122
NC_003888.3	RefSeq	CDS	7912792	7913283	.	+	0	ID=cds7053;Parent=gene7185;Dbxref=Genbank:NP_631183.1,GeneID:1102560;Name=NP_631183.1;Note=SC4B10.23%2C possible acetyltransferase%2C len: 163 aa%3B similar to TR:Q9RCV6 (EMBL:AL136149) Streptomyces coelicolor  acetyltransferase SCM2.08c%2C 168 aa%3B fasta scores: opt: 111 z-score: 148.3 E(): 0.86%3B 30.5%25 identity in 118 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC4B10.23;product=acetyltransferase;protein_id=NP_631183.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7912975	7913193	.	+	.	ID=id9236;Dbxref=GeneID:1102560;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 21.40%2C E-value 0.021;gbkey=misc_feature;gene=SC4B10.23
NC_003888.3	RefSeq	gene	7913374	7914627	.	-	.	ID=gene7186;Dbxref=GeneID:1102561;Name=SC4B10.24c;gbkey=Gene;gene=SC4B10.24c;gene_biotype=protein_coding;gene_synonym=SC4B10.24c;locus_tag=SCO7123
NC_003888.3	RefSeq	CDS	7913374	7914627	.	-	0	ID=cds7054;Parent=gene7186;Dbxref=Genbank:NP_631184.1,GeneID:1102561;Name=NP_631184.1;Note=SC4B10.24c%2C probable acyltransferase%2C len: 417 aa%3B similar to SW:ODO2_ALCEU (EMBL:X91877) Alcaligenes eutrophus dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) SucB%2C 416 aa%3B fasta scores: opt: 793 z-score: 570.6 E(): 2.6e-24%3B 39.0%25 identity in 421 aa overlap%2C to C-terminal region of TR:Q9Z6I4 (EMBL:AF047034) Streptomyces seoulensis dihydrolipoamide acetyltransferase PdhB%2C 612 aa%3B fasta scores: opt: 1251 z-score: 887.0 E(): 0%3B 61.0%25 identity in 474 aa overlap and to TR:CAB51265 (EMBL:AL096872) Streptomyces coelicolor dihydrolipoamide succinyltransferase sucB SC5F7.20%2C 590 aa%3B fasta scores: opt: 1247 z-score: 694.4 E(): 4.7e-33%3B 63.5%25 identity in 457 aa overlap. Contains Pfam matches to entries PF00364 biotin_lipoyl%2C Biotin-requiring enzymes and PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain) and match to Prosite entry PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. Also contains region with high content in alanine%2C proline and threonine amino acid residues;gbkey=CDS;gene=SC4B10.24c;product=acyltransferase;protein_id=NP_631184.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7913404	7914072	.	-	.	ID=id9237;Dbxref=GeneID:1102561;Note=Pfam match to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain)%2C score 269.10%2C E-value 5.8e-77;gbkey=misc_feature;gene=SC4B10.24c
NC_003888.3	RefSeq	sequence_feature	7914121	7914396	.	-	.	ID=id9238;Dbxref=GeneID:1102561;Note=alanine%2C proline and threonine amino acids rich region. High G+C (82.6%25);gbkey=misc_feature;gene=SC4B10.24c
NC_003888.3	RefSeq	sequence_feature	7914400	7914621	.	-	.	ID=id9239;Dbxref=GeneID:1102561;Note=Pfam match to entry PF00364 biotin_lipoyl%2C Biotin-requiring enzymes%2C score 106.50%2C E-value 5.1e-28;gbkey=misc_feature;gene=SC4B10.24c
NC_003888.3	RefSeq	sequence_feature	7914460	7914549	.	-	.	ID=id9240;Dbxref=GeneID:1102561;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site;gbkey=misc_feature;gene=SC4B10.24c
NC_003888.3	RefSeq	gene	7914737	7917424	.	-	.	ID=gene7187;Dbxref=GeneID:1102562;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;gene_synonym=aceE3,SC4B10.25c;locus_tag=SCO7124
NC_003888.3	RefSeq	CDS	7914737	7917424	.	-	0	ID=cds7055;Parent=gene7187;Dbxref=Genbank:NP_631185.1,GeneID:1102562;Name=NP_631185.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase subunit E1;protein_id=NP_631185.1;transl_table=11
NC_003888.3	RefSeq	gene	7917541	7918281	.	-	.	ID=gene7188;Dbxref=GeneID:1102563;Name=SC4B10.26c;gbkey=Gene;gene=SC4B10.26c;gene_biotype=protein_coding;gene_synonym=SC4B10.26c;locus_tag=SCO7125
NC_003888.3	RefSeq	CDS	7917541	7918281	.	-	0	ID=cds7056;Parent=gene7188;Dbxref=Genbank:NP_631186.1,GeneID:1102563;Name=NP_631186.1;Note=SC4B10.26c%2C conserved hypothetical protein%2C len: 246 aa%3B highly similar to TR:Q9S1U9 (EMBL:AL109950) Streptomyces coelicolor hypothetical 25.2 kDa protein SCJ4.24c%2C 242 aa%3B fasta scores: opt: 643 z-score: 729.3 E(): 0%3B 45.1%25 identity in 244 aa overlap and to Streptomyces coelicolor SC4B10.09c%2C 248 aa%3B fasta scores: opt: 779 z-score: 733.5 E(): 0%3B 51.6%25 identity in 244 aa overlap;gbkey=CDS;gene=SC4B10.26c;product=hypothetical protein;protein_id=NP_631186.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7918288	7918292	.	-	.	ID=id9241;gbkey=RBS
NC_003888.3	RefSeq	gene	7918561	7919013	.	+	.	ID=gene7189;Dbxref=GeneID:1102564;Name=SC4B10.27;gbkey=Gene;gene=SC4B10.27;gene_biotype=protein_coding;gene_synonym=SC4B10.27;locus_tag=SCO7126
NC_003888.3	RefSeq	CDS	7918561	7919013	.	+	0	ID=cds7057;Parent=gene7189;Dbxref=Genbank:NP_631187.1,GeneID:1102564;Name=NP_631187.1;Note=SC4B10.27%2C unknown%2C len: 150 aa;gbkey=CDS;gene=SC4B10.27;product=hypothetical protein;protein_id=NP_631187.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7919032	7919094	.	+	.	ID=id9242;Note=possible stem loop. Score 62: 22/23 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7919133	7919627	.	-	.	ID=gene7190;Dbxref=GeneID:1102565;Name=SC4B10.28c;gbkey=Gene;gene=SC4B10.28c;gene_biotype=protein_coding;gene_synonym=SC4B10.28c;locus_tag=SCO7127
NC_003888.3	RefSeq	CDS	7919133	7919627	.	-	0	ID=cds7058;Parent=gene7190;Dbxref=Genbank:NP_631188.1,GeneID:1102565;Name=NP_631188.1;Note=SC4B10.28c%2C hypothetical protein%2C len: 164 aa%3B similar to TR:Q9Z582 (EMBL:AL035569) Streptomyces coelicolor hypothetical protein SC8D9%2C 164 aa%3B fasta scores: opt:257 z-score: 326.3 E(): 1e-10%3B 34.1%25 identity in 132 aa overlap;gbkey=CDS;gene=SC4B10.28c;product=hypothetical protein;protein_id=NP_631188.1;transl_table=11
NC_003888.3	RefSeq	gene	7919673	7921208	.	-	.	ID=gene7191;Dbxref=GeneID:1102566;Name=SC4B10.29c;gbkey=Gene;gene=SC4B10.29c;gene_biotype=protein_coding;gene_synonym=SC4B10.29c;locus_tag=SCO7128
NC_003888.3	RefSeq	CDS	7919673	7921208	.	-	0	ID=cds7059;Parent=gene7191;Dbxref=Genbank:NP_631189.1,GeneID:1102566;Name=NP_631189.1;Note=SC4B10.29c%2C possible transmembrane efflux protein%2C len: 511 aa%3B similar to SW:AC22_STRCO (EMBL:M64683) Streptomyces coelicolor probable actinorhodin transporter actII-2%2C 578 aa%3B fasta scores: opt: 730 z-score: 787.0 E(): 0%3B 34.9%25 identity in 484 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4B10.29c;product=transmembrane efflux protein;protein_id=NP_631189.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7919787	7921145	.	-	.	ID=id9243;Dbxref=GeneID:1102566;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -91.40%2C E-value 0.0013;gbkey=misc_feature;gene=SC4B10.29c
NC_003888.3	RefSeq	gene	7921324	7921794	.	-	.	ID=gene7192;Dbxref=GeneID:1102567;Name=SC4B10.30c;gbkey=Gene;gene=SC4B10.30c;gene_biotype=protein_coding;gene_synonym=SC4B10.30c;locus_tag=SCO7129
NC_003888.3	RefSeq	CDS	7921324	7921794	.	-	0	ID=cds7060;Parent=gene7192;Dbxref=Genbank:NP_631190.1,GeneID:1102567;Name=NP_631190.1;Note=SC4B10.30c%2C conserved hypothetical protein%2C len: 156 aa%3B similar to TR:CAB88826 (EMBL:AL353832) Streptomyces coelicolor hypothetical 16.8 kD protein SCE6.22c%2C 157 aa%3B fasta scores: opt: 788 z-score: 985.4 E(): 0%3B 75.2%25 identity in 157 aa overlap;gbkey=CDS;gene=SC4B10.30c;product=hypothetical protein;protein_id=NP_631190.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7921802	7921806	.	-	.	ID=id9244;gbkey=RBS
NC_003888.3	RefSeq	gene	7922097	7922885	.	+	.	ID=gene7193;Dbxref=GeneID:1102568;Name=SC4B10.31;gbkey=Gene;gene=SC4B10.31;gene_biotype=protein_coding;gene_synonym=SC4B10.31;locus_tag=SCO7130
NC_003888.3	RefSeq	CDS	7922097	7922885	.	+	0	ID=cds7061;Parent=gene7193;Dbxref=Genbank:NP_631191.1,GeneID:1102568;Name=NP_631191.1;Note=SC4B10.31%2C hypothetical protein%2C len: 262 aa%3B similar to TR:O53404 (EMBL:AL021897) Mycobacterium tuberculosis hypothetical 28.9 kDa protein MTV017.09%2C 254 aa%3B fasta scores: opt: 820 z-score: 1018.9 E(): 0%3B 49.0%25 identity in 249 aa overlap;gbkey=CDS;gene=SC4B10.31;product=hypothetical protein;protein_id=NP_631191.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7922975	7922980	.	+	.	ID=id9245;gbkey=RBS
NC_003888.3	RefSeq	gene	7922986	7923936	.	+	.	ID=gene7194;Dbxref=GeneID:1102569;Name=SC4B10.32;gbkey=Gene;gene=SC4B10.32;gene_biotype=protein_coding;gene_synonym=SC4B10.32;locus_tag=SCO7131
NC_003888.3	RefSeq	CDS	7922986	7923936	.	+	0	ID=cds7062;Parent=gene7194;Dbxref=Genbank:NP_631192.1,GeneID:1102569;Name=NP_631192.1;Note=SC4B10.32%2C possible lipase%2C len: 316 aa%3B similar to TR:O52270 (EMBL:AF034088) Pseudomonas sp. lipase (EC 3.1.1.-) LipP%2C 308 aa%3B fasta scores: opt: 675 z-score: 762.7 E(): 0%3B 38.0%25 identity in 303 aa overlap;gbkey=CDS;gene=SC4B10.32;product=lipase;protein_id=NP_631192.1;transl_table=11
NC_003888.3	RefSeq	gene	7923955	7924674	.	+	.	ID=gene7195;Dbxref=GeneID:1102570;Name=SC4B10.33;gbkey=Gene;gene=SC4B10.33;gene_biotype=protein_coding;gene_synonym=SC4B10.33;locus_tag=SCO7132
NC_003888.3	RefSeq	CDS	7923955	7924674	.	+	0	ID=cds7063;Parent=gene7195;Dbxref=Genbank:NP_631193.1,GeneID:1102570;Name=NP_631193.1;Note=SC4B10.33%2C conserved hypothetical protein%2C len: 239 aa%3B highly similar to TR:Q9S1Z1 (EMBL:AL109747) Streptomyces coelicolor hypothetical 24.6 kDa protein SCJ21.16%2C 239 aa%3B fasta scores: opt: 1227 z-score: 1384.6 E(): 0%3B 79.0%25 identity in 238 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold and match to Prosite entry PS00120 Lipases%2C serine active site;gbkey=CDS;gene=SC4B10.33;product=hypothetical protein;protein_id=NP_631193.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7923967	7924659	.	+	.	ID=id9246;Dbxref=GeneID:1102570;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 25.80%2C E-value 0.00011;gbkey=misc_feature;gene=SC4B10.33
NC_003888.3	RefSeq	sequence_feature	7924141	7924170	.	+	.	ID=id9247;Dbxref=GeneID:1102570;Note=PS00120 Lipases%2C serine active site;gbkey=misc_feature;gene=SC4B10.33
NC_003888.3	RefSeq	ribosome_entry_site	7924770	7924773	.	+	.	ID=id9248;gbkey=RBS
NC_003888.3	RefSeq	gene	7924780	7925121	.	+	.	ID=gene7196;Dbxref=GeneID:1102571;Name=SC4B10.34;gbkey=Gene;gene=SC4B10.34;gene_biotype=protein_coding;gene_synonym=SC4B10.34;locus_tag=SCO7133
NC_003888.3	RefSeq	CDS	7924780	7925121	.	+	0	ID=cds7064;Parent=gene7196;Dbxref=Genbank:NP_631194.1,GeneID:1102571;Name=NP_631194.1;Note=SC4B10.34%2C possible membrane protein%2C len: 113 aa%3B similar to TR:CAB89768 (EMBL:AL354616) Streptomyces coelicolor  membrane protein SC3A4.22%2C 114 aa%3B fasta scores: opt: 276 z-score: 371.5 E(): 3.1e-13%3B 39.4%25 identity in 109 aa overlap. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC4B10.34;product=hypothetical protein;protein_id=NP_631194.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7925346	7925350	.	+	.	ID=id9249;gbkey=RBS
NC_003888.3	RefSeq	gene	7925356	7928127	.	+	.	ID=gene7197;Dbxref=GeneID:1102572;Name=SC4B10.35;gbkey=Gene;gene=SC4B10.35;gene_biotype=protein_coding;gene_synonym=SC4B10.35;locus_tag=SCO7134
NC_003888.3	RefSeq	CDS	7925356	7928127	.	+	0	ID=cds7065;Parent=gene7197;Dbxref=Genbank:NP_631195.1,GeneID:1102572;Name=NP_631195.1;Note=SC4B10.35%2C probable transcriptional regulatory protein%2C len: 923 aa%3B similar to TR:Q9S1Z4 (EMBL:AL109747) Streptomyces coelicolor probable transcriptional regulator SCJ21.13%2C 919 aa%3B fasta scores: opt: 2675 z-score: 2853.2 E(): 0%3B 50.6%25 identity in 926 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible helix-turn-helix motif at residues 876..897 (+3.18 SD);gbkey=CDS;gene=SC4B10.35;product=transcriptional regulator;protein_id=NP_631195.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7925470	7925493	.	+	.	ID=id9250;Dbxref=GeneID:1102572;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4B10.35
NC_003888.3	RefSeq	sequence_feature	7927927	7928121	.	+	.	ID=id9251;Dbxref=GeneID:1102572;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 52.30%2C E-value 1.1e-11;gbkey=misc_feature;gene=SC4B10.35
NC_003888.3	RefSeq	gene	7928148	7928555	.	-	.	ID=gene7198;Dbxref=GeneID:1102573;Name=SC4B10.36c;gbkey=Gene;gene=SC4B10.36c;gene_biotype=protein_coding;gene_synonym=SC4B10.36c;locus_tag=SCO7135
NC_003888.3	RefSeq	CDS	7928148	7928555	.	-	0	ID=cds7066;Parent=gene7198;Dbxref=Genbank:NP_631196.1,GeneID:1102573;Name=NP_631196.1;Note=SC4B10.36c%2C unknown%2C len: 135 aa;gbkey=CDS;gene=SC4B10.36c;product=hypothetical protein;protein_id=NP_631196.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7928563	7928566	.	-	.	ID=id9252;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7928732	7928735	.	+	.	ID=id9253;gbkey=RBS
NC_003888.3	RefSeq	gene	7928742	7929485	.	+	.	ID=gene7199;Dbxref=GeneID:1102574;Name=SC4B10.37;gbkey=Gene;gene=SC4B10.37;gene_biotype=protein_coding;gene_synonym=SC4B10.37;locus_tag=SCO7136
NC_003888.3	RefSeq	CDS	7928742	7929485	.	+	0	ID=cds7067;Parent=gene7199;Dbxref=Genbank:NP_631197.1,GeneID:1102574;Name=NP_631197.1;Note=SC4B10.37%2C conserved hypothetical protein%2C len: 247 aa%3B similar to TR:CAB76867 (EMBL:AL159139) Streptomyces coelicolor hypothetical 27.0 kD protein SCL6.02 %2C 255 aa%3B fasta scores: opt: 504 z-score: 571.2 E(): 2.4e-24%3B 41.3%25 identity in 247 aa overlap;gbkey=CDS;gene=SC4B10.37;product=hypothetical protein;protein_id=NP_631197.1;transl_table=11
NC_003888.3	RefSeq	gene	7929510	7932284	.	-	.	ID=gene7200;Dbxref=GeneID:1102575;Name=SC4B10.38c;gbkey=Gene;gene=SC4B10.38c;gene_biotype=protein_coding;gene_synonym=SC4B10.38c,SC8B1.01c;locus_tag=SCO7137
NC_003888.3	RefSeq	CDS	7929510	7932284	.	-	0	ID=cds7068;Parent=gene7200;Dbxref=Genbank:NP_733723.1,GeneID:1102575;Name=NP_733723.1;Note=SC8B1.01c%2C possible regulatory protein (fragment)%2C len: >708 aa%3B similar to TR:Q9S1Z4 (EMBL:AL109747) Streptomyces coelicolor probable transcriptional regulator SCJ21.13%2C 919 aa%3B fasta scores: opt: 2764 z-score: 2921.5 E(): 0%3B 63.0%25 identity in 690 aa overlap and to TR:Q9ZIW5 (EMBL:AF009336) Streptomyces coelicolor transcriptional activator of lipA gene%2C LipR%2C 941 aa%3B fasta scores: opt: 332 z-score: 350.0 E(): 5e-12%3B 29.5%25 identity in 698 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a TTA leucine codon%2C possible target for bldA regulation~SC4B10.38c%2C probable transcriptional regulator (fragment)%2C len: >249 aa%3B similar to C-terminal region of TR:Q9S1Z4 (EMBL:AL109747) Streptomyces coelicolor probable transcriptional regulator SCJ21.13%2C 919 aa%3B fasta scores: opt: 1004 z-score: 1188.9 E(): 0%3B 64.3%25 identity in 249 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and possible helix-turn-helix motif at residues 210..231 (+3.95 SD);gbkey=CDS;gene=SC4B10.38c;product=regulatory protein;protein_id=NP_733723.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7929516	7929686	.	-	.	ID=id9254;Dbxref=GeneID:1102575;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 39.80%2C E-value 6e-08;gbkey=misc_feature;gene=SC4B10.38c
NC_003888.3	RefSeq	sequence_feature	7932117	7932140	.	-	.	ID=id9255;Dbxref=GeneID:1102575;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4B10.38c
NC_003888.3	RefSeq	sequence_feature	7932276	7932278	.	-	.	ID=id9256;Dbxref=GeneID:1102575;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SC4B10.38c
NC_003888.3	RefSeq	ribosome_entry_site	7932443	7932447	.	+	.	ID=id9257;gbkey=RBS
NC_003888.3	RefSeq	gene	7932458	7932790	.	+	.	ID=gene7201;Dbxref=GeneID:1102576;Name=SC8B1.02;gbkey=Gene;gene=SC8B1.02;gene_biotype=protein_coding;gene_synonym=SC8B1.02;locus_tag=SCO7138
NC_003888.3	RefSeq	CDS	7932458	7932790	.	+	0	ID=cds7069;Parent=gene7201;Dbxref=Genbank:NP_631198.1,GeneID:1102576;Name=NP_631198.1;Note=SC8B1.02%2C conserved hypothetical protein%2C len: 110 aa%3B similar to TR:Q9S1Z3 (EMBL:AL109747) Streptomyces coelicolor hypothetical 13.6 kD protein SCJ21.14%2C 126 aa%3B fasta scores: opt: 264 z-score: 348.4 E(): 6.1e-12%3B 46.2%25 identity in 93 aa overlap;gbkey=CDS;gene=SC8B1.02;product=hypothetical protein;protein_id=NP_631198.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7932918	7932922	.	+	.	ID=id9258;gbkey=RBS
NC_003888.3	RefSeq	gene	7932929	7934395	.	+	.	ID=gene7202;Dbxref=GeneID:1102577;Name=SC8B1.03;gbkey=Gene;gene=SC8B1.03;gene_biotype=protein_coding;gene_synonym=SC8B1.03,SC9A4.01;locus_tag=SCO7139
NC_003888.3	RefSeq	CDS	7932929	7934395	.	+	0	ID=cds7070;Parent=gene7202;Dbxref=Genbank:NP_733724.1,GeneID:1102577;Name=NP_733724.1;Note=SC8B1.03%2C probable aldehyde dehydrogenase (fragment)%2C len: >469 aa%3B similar to SW:DHAB_RHIME (EMBL:U39940) Rhizobium meliloti betaine aldehyde dehydrogenase (EC 1.2.1.8) BetB%2C 487 aa%3B fasta scores: opt: 1021 z-score: 1101.5 E(): 0%3B 40.5%25 identity in 462 aa overlap and to TR:CAB46804 (EMBL:AL096811) Streptomyces coelicolor aldehyde dehydrogenase SCI30A.27c%2C 462 aa%3B fasta scores: opt: 1074 z-score: 994.9 E(): 0%3B 52.9%25 identity in 448 aa overlap. Contains Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00687 Aldehyde dehydrogenases glutamic acid active site~SC9A4.01c%2C possible dehydrogenase (fragment)%2C len: >51 aa%3B highly similar to C-terminal region of SW:DHAB_BACSU (EMBL:U47861) Bacillus subtilis betaine aldehyde dehydrogenase (EC 1.2.1.8) gbsA%2C 490 aa%3B fasta scores: opt: 179 z-score: 258.5 E(): 6.3e-07%3B 56.0%25 identity in 50 aa overlap;gbkey=CDS;gene=SC8B1.03;product=aldehyde dehydrogenase;protein_id=NP_733724.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7933001	7934332	.	+	.	ID=id9259;Dbxref=GeneID:1102577;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 479.00%2C E-value 3.8e-140;gbkey=misc_feature;gene=SC8B1.03
NC_003888.3	RefSeq	sequence_feature	7933646	7933669	.	+	.	ID=id9260;Dbxref=GeneID:1102577;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8B1.03
NC_003888.3	RefSeq	sequence_feature	7933709	7933732	.	+	.	ID=id9261;Dbxref=GeneID:1102577;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SC8B1.03
NC_003888.3	RefSeq	gene	7934492	7935322	.	+	.	ID=gene7203;Dbxref=GeneID:1102578;Name=SC9A4.02;gbkey=Gene;gene=SC9A4.02;gene_biotype=protein_coding;gene_synonym=SC9A4.02;locus_tag=SCO7140
NC_003888.3	RefSeq	CDS	7934492	7935322	.	+	0	ID=cds7071;Parent=gene7203;Dbxref=Genbank:NP_631199.1,GeneID:1102578;Name=NP_631199.1;Note=SC9A4.02%2C probable DNA-binding protein%2C len: 276 aa%3B highly similar to TR:Q9S1Q8 (EMBL:AL109972) Streptomyces coelicolor  DNA-binding protein SCJ9A.12c%2C 279 aa%3B fasta scores: opt: 1046 z-score: 1203.5 E(): 0%3B 59.1%25 identity in 274 aa overlap. Contains a possible helix-turn-helix motif at residues 36..57 (+3.89 SD);gbkey=CDS;gene=SC9A4.02;product=DNA-binding protein;protein_id=NP_631199.1;transl_table=11
NC_003888.3	RefSeq	gene	7935350	7935958	.	-	.	ID=gene7204;Dbxref=GeneID:1102579;Name=SC9A4.03c;gbkey=Gene;gene=SC9A4.03c;gene_biotype=protein_coding;gene_synonym=SC9A4.03c;locus_tag=SCO7141
NC_003888.3	RefSeq	CDS	7935350	7935958	.	-	0	ID=cds7072;Parent=gene7204;Dbxref=Genbank:NP_631200.1,GeneID:1102579;Name=NP_631200.1;Note=SC9A4.03%2C possible nitroreductase%2C len: 202 aa%3B similar to SW:NFNB_ECOLI (EMBL:D25414) Escherichia coli oxygen-insensitive NAD(P)H nitroreductase (dihydropteridine reductase) (EC 1.6.99.7) NfnB%2C 217 aa%3B fasta scores: opt: 136 z-score: 170.8 E(): 0.048%3B 28.4%25 identity in 169 aa overlap. Contains Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family;gbkey=CDS;gene=SC9A4.03c;product=hypothetical protein;protein_id=NP_631200.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7935458	7935919	.	-	.	ID=id9262;Dbxref=GeneID:1102579;Note=Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family%2C score 42.40%2C E-value 1e-08;gbkey=misc_feature;gene=SC9A4.03c
NC_003888.3	RefSeq	ribosome_entry_site	7935966	7935969	.	-	.	ID=id9263;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7936065	7936068	.	+	.	ID=id9264;gbkey=RBS
NC_003888.3	RefSeq	gene	7936071	7936472	.	+	.	ID=gene7205;Dbxref=GeneID:1102580;Name=SC9A4.04;gbkey=Gene;gene=SC9A4.04;gene_biotype=protein_coding;gene_synonym=SC9A4.04;locus_tag=SCO7142
NC_003888.3	RefSeq	CDS	7936071	7936472	.	+	0	ID=cds7073;Parent=gene7205;Dbxref=Genbank:NP_631201.1,GeneID:1102580;Name=NP_631201.1;Note=SC9A4.04%2C hypothetical protein%2C len: 133 aa%3B similar to SW:YODB_BACSU (EMBL:AF006665) Bacillus subtilis hypothetical 12.8 kDa protein in OdhA-CtpA intergenic region YodB%2C 112 aa%3B fasta scores: opt: 258 z-score: 328.5 E(): 7.9e-11%3B 44.0%25 identity in 91 aa overlap. Contains Pfam match to entry PF01638 DUF24%2C Protein of unknown function DUF24;gbkey=CDS;gene=SC9A4.04;product=hypothetical protein;protein_id=NP_631201.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7936173	7936445	.	+	.	ID=id9265;Dbxref=GeneID:1102580;Note=Pfam match to entry PF01638 DUF24%2C Protein of unknown function DUF24%2C score 97.50%2C E-value 2.7e-25;gbkey=misc_feature;gene=SC9A4.04
NC_003888.3	RefSeq	ribosome_entry_site	7936660	7936664	.	+	.	ID=id9266;gbkey=RBS
NC_003888.3	RefSeq	gene	7936673	7939486	.	+	.	ID=gene7206;Dbxref=GeneID:1102581;Name=SC9A4.05;gbkey=Gene;gene=SC9A4.05;gene_biotype=protein_coding;gene_synonym=SC9A4.05;locus_tag=SCO7143
NC_003888.3	RefSeq	CDS	7936673	7939486	.	+	0	ID=cds7074;Parent=gene7206;Dbxref=Genbank:NP_631202.1,GeneID:1102581;Name=NP_631202.1;Note=SC9A4.05%2C probable transcriptional regulator%2C len: 937 aa%3B similar to TR:CAB89765 (EMBL:AL354616) Streptomyces coelicolor  transcriptional regulator SC3A4.19%2C 932 aa%3B fasta scores: opt: 2131 z-score: 2221.3 E(): 0%3B 43.6%25 identity in 928 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains helix-turn-helix motif at residues 881..902 (+3.88 SD);gbkey=CDS;gene=SC9A4.05;product=transcriptional regulator;protein_id=NP_631202.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7936784	7936807	.	+	.	ID=id9267;Dbxref=GeneID:1102581;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC9A4.05
NC_003888.3	RefSeq	sequence_feature	7939259	7939480	.	+	.	ID=id9268;Dbxref=GeneID:1102581;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 49.10%2C E-value 9.8e-11;gbkey=misc_feature;gene=SC9A4.05
NC_003888.3	RefSeq	ribosome_entry_site	7939607	7939612	.	+	.	ID=id9269;gbkey=RBS
NC_003888.3	RefSeq	gene	7939618	7940355	.	+	.	ID=gene7207;Dbxref=GeneID:1102582;Name=SC9A4.06;gbkey=Gene;gene=SC9A4.06;gene_biotype=protein_coding;gene_synonym=SC9A4.06;locus_tag=SCO7144
NC_003888.3	RefSeq	CDS	7939618	7940355	.	+	0	ID=cds7075;Parent=gene7207;Dbxref=Genbank:NP_631203.1,GeneID:1102582;Name=NP_631203.1;Note=SC9A4.06%2C possible ECF sigma factor%2C len: 245 aa%3B similar to TR:Q9RDI5 (EMBL:AL136519) Streptomyces coelicolor sigma factor SCC57A.13c%2C 315 aa%3B fasta scores: opt: 395 z-score: 475.1 E(): 5.3e-19%3B 35.0%25 identity in 197 aa overlap and to SW:RPSH_PSEAE (EMBL:L14760) Pseudomonas aeruginosa RNA polymerase sigma-H factor AlgU%2C 193 aa%3B fasta scores: opt: 143 z-score: 180.2 E(): 0.014%3B 26.0%25 identity in 177 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily);gbkey=CDS;gene=SC9A4.06;product=ECF sigma factor;protein_id=NP_631203.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7939735	7939905	.	+	.	ID=id9270;Dbxref=GeneID:1102582;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 7.20%2C E-value 0.018;gbkey=misc_feature;gene=SC9A4.06
NC_003888.3	RefSeq	ribosome_entry_site	7940552	7940557	.	+	.	ID=id9271;gbkey=RBS
NC_003888.3	RefSeq	gene	7940566	7941048	.	+	.	ID=gene7208;Dbxref=GeneID:1102583;Name=SC9A4.07;gbkey=Gene;gene=SC9A4.07;gene_biotype=protein_coding;gene_synonym=SC9A4.07;locus_tag=SCO7145
NC_003888.3	RefSeq	CDS	7940566	7941048	.	+	0	ID=cds7076;Parent=gene7208;Dbxref=Genbank:NP_631204.1,GeneID:1102583;Name=NP_631204.1;Note=SC9A4.07%2C possible transcriptional regulator%2C len: 160 aa%3B similar to TR:Q9X8V0 (EMBL:AL049826) Streptomyces coelicolor  transcriptional regulator SCH24.36c%2C 154 aa%3B fasta scores: opt: 218 z-score: 278.5 E(): 4.8e-08%3B 36.5%25 identity in 115 aa overlap and to SW:MPRA_ECOLI (EMBL:X54151) Escherichia coli transcriptional repressor MprA%2C 176 aa%3B fasta scores: opt: 139 z-score: 182.0 E(): 0.011%3B 25.6%25 identity in 125 aa overlap. Contains Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family and possible helix-turn-helix motif at residues 57..78 (+3.58 SD);gbkey=CDS;gene=SC9A4.07;product=transcriptional regulator;protein_id=NP_631204.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7940734	7940823	.	+	.	ID=id9272;Dbxref=GeneID:1102583;Note=Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family%2C score 17.90%2C E-value 0.00028;gbkey=misc_feature;gene=SC9A4.07
NC_003888.3	RefSeq	gene	7941058	7941408	.	+	.	ID=gene7209;Dbxref=GeneID:1102584;Name=SC9A4.08;gbkey=Gene;gene=SC9A4.08;gene_biotype=protein_coding;gene_synonym=SC9A4.08;locus_tag=SCO7146
NC_003888.3	RefSeq	CDS	7941058	7941408	.	+	0	ID=cds7077;Parent=gene7209;Dbxref=Genbank:NP_631205.1,GeneID:1102584;Name=NP_631205.1;Note=SC9A4.08%2C possible regulatory protein%2C len: 116 aa%3B similar to TR:Q9X8Y1 (EMBL:AL078610) Streptomyces coelicolor  transcriptional regulator SCH35.25%2C 102 aa%3B fasta scores: opt: 144 z-score: 203.2 E(): 0.00075%3B 37.9%25 identity in 87 aa overlap. Contains Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family;gbkey=CDS;gene=SC9A4.08;product=regulatory protein;protein_id=NP_631205.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7941112	7941354	.	+	.	ID=id9273;Dbxref=GeneID:1102584;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 47.40%2C E-value 3.2e-10;gbkey=misc_feature;gene=SC9A4.08
NC_003888.3	RefSeq	ribosome_entry_site	7941638	7941643	.	+	.	ID=id9274;gbkey=RBS
NC_003888.3	RefSeq	gene	7941649	7942416	.	+	.	ID=gene7210;Dbxref=GeneID:1102585;Name=SC9A4.09;gbkey=Gene;gene=SC9A4.09;gene_biotype=protein_coding;gene_synonym=SC9A4.09;locus_tag=SCO7147
NC_003888.3	RefSeq	CDS	7941649	7942416	.	+	0	ID=cds7078;Parent=gene7210;Dbxref=Genbank:NP_631206.1,GeneID:1102585;Name=NP_631206.1;Note=SC9A4.09%2C probable ketoreductase%2C len: 255 aa%3B similar to TR:Q9RN66 (EMBL:AF187532) Streptomyces nogalater C-7 ketoreductase%2C 281 aa%3B fasta scores: opt: 616 z-score: 709.0 E(): 5e-32%3B 40.3%25 identity in 243 aa overlap and to SW:FABG_THEMA (EMBL:AE001811) Thermotoga maritima 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) FabG%2C 246 aa%3B fasta scores: opt: 448 z-score: 519.1 E(): 1.9e-21%3B 34.1%25 identity in 246 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=CDS;gene=SC9A4.09;product=ketoreductase;protein_id=NP_631206.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7941685	7942224	.	+	.	ID=id9275;Dbxref=GeneID:1102585;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 222.20%2C E-value 7.9e-63;gbkey=misc_feature;gene=SC9A4.09
NC_003888.3	RefSeq	sequence_feature	7942075	7942161	.	+	.	ID=id9276;Dbxref=GeneID:1102585;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC9A4.09
NC_003888.3	RefSeq	ribosome_entry_site	7942501	7942504	.	+	.	ID=id9277;gbkey=RBS
NC_003888.3	RefSeq	gene	7942508	7942861	.	+	.	ID=gene7211;Dbxref=GeneID:1102586;Name=SC9A4.10;gbkey=Gene;gene=SC9A4.10;gene_biotype=protein_coding;gene_synonym=SC9A4.10;locus_tag=SCO7148
NC_003888.3	RefSeq	CDS	7942508	7942861	.	+	0	ID=cds7079;Parent=gene7211;Dbxref=Genbank:NP_631207.1,GeneID:1102586;Name=NP_631207.1;Note=SC9A4.10%2C hypothetical protein%2C len: 117 aa%3B similar to C-terminal region of SW:DAC_STRSQ (EMBL:M26842) Streptomyces sp. D-alanyl-D-alanine carboxypeptidase precursor (EC 3.4.16.4) Dac%2C 406 aa%3B fasta scores: opt: 186 z-score: 224.1 E(): 5.1e-05%3B 43.1%25 identity in 102 aa overlap;gbkey=CDS;gene=SC9A4.10;product=hypothetical protein;protein_id=NP_631207.1;transl_table=11
NC_003888.3	RefSeq	gene	7942893	7943348	.	+	.	ID=gene7212;Dbxref=GeneID:1102587;Name=SC9A4.11;gbkey=Gene;gene=SC9A4.11;gene_biotype=protein_coding;gene_synonym=SC9A4.11;locus_tag=SCO7149
NC_003888.3	RefSeq	CDS	7942893	7943348	.	+	0	ID=cds7080;Parent=gene7212;Dbxref=Genbank:NP_631208.1,GeneID:1102587;Name=NP_631208.1;Note=SC9A4.11%2C possible lyase%2C len: 151 aa%3B similar to TR:Q9XA78 (EMBL:AL096837) Streptomyces coelicolor lyase SCF43A.37c%2C 152 aa%3B fasta scores: opt: 679 z-score: 811.2 E(): 0%3B 69.7%25 identity in 145 aa overlap and to SW:BHC3_RHOGO (EMBL:X75635) Rhodococcus globerulus biphenyl-2%2C3-diol 1%2C2-dioxygenase III (EC 1.13.11.39) BphC3%2C 189 aa%3B fasta scores: opt: 146 z-score: 184.1 E(): 0.0087%3B 29.3%25 identity in 123 aa overlap;gbkey=CDS;gene=SC9A4.11;product=lyase;protein_id=NP_631208.1;transl_table=11
NC_003888.3	RefSeq	gene	7943578	7944414	.	-	.	ID=gene7213;Dbxref=GeneID:1102588;Name=SC9A4.12c;gbkey=Gene;gene=SC9A4.12c;gene_biotype=protein_coding;gene_synonym=SC9A4.12c;locus_tag=SCO7150
NC_003888.3	RefSeq	CDS	7943578	7944414	.	-	0	ID=cds7081;Parent=gene7213;Dbxref=Genbank:NP_631209.1,GeneID:1102588;Name=NP_631209.1;Note=SC9A4.12c%2C possible acetyltransferase%2C len: 278 aa%3B similar to TR:Q9V2R3 (EMBL:AJ248283) Pyrococcus abyssi hypothetical 30.2 kDa protein PAB2346%2C 266 aa%3B fasta scores: opt: 149 z-score: 182.6 E(): 0.011%3B 33.3%25 identity in 90 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC9A4.12c;product=acetyltransferase;protein_id=NP_631209.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7943617	7943832	.	-	.	ID=id9278;Dbxref=GeneID:1102588;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 56.50%2C E-value 5.9e-13;gbkey=misc_feature;gene=SC9A4.12c
NC_003888.3	RefSeq	ribosome_entry_site	7944595	7944603	.	+	.	ID=id9279;gbkey=RBS
NC_003888.3	RefSeq	gene	7944613	7945416	.	+	.	ID=gene7214;Dbxref=GeneID:1102589;Name=SC9A4.13;gbkey=Gene;gene=SC9A4.13;gene_biotype=protein_coding;gene_synonym=SC9A4.13;locus_tag=SCO7151
NC_003888.3	RefSeq	CDS	7944613	7945416	.	+	0	ID=cds7082;Parent=gene7214;Dbxref=Genbank:NP_631210.1,GeneID:1102589;Name=NP_631210.1;Note=SC9A4.13%2C conserved hypothetical protein%2C len: 267 aa%3B similar to TR:Q9S1U9 (EMBL:AL109950) Streptomyces coelicolor hypothetical 25.2 kDa protein%2C 242 aa%3B fasta scores: opt: 358 z-score: 430.9 E(): 1.6e-16%3B 32.6%25 identity in 258 aa overlap;gbkey=CDS;gene=SC9A4.13;product=hypothetical protein;protein_id=NP_631210.1;transl_table=11
NC_003888.3	RefSeq	gene	7945453	7946277	.	+	.	ID=gene7215;Dbxref=GeneID:1102590;Name=SC9A4.14;gbkey=Gene;gene=SC9A4.14;gene_biotype=protein_coding;gene_synonym=SC9A4.14;locus_tag=SCO7152
NC_003888.3	RefSeq	CDS	7945453	7946277	.	+	0	ID=cds7083;Parent=gene7215;Dbxref=Genbank:NP_631211.1,GeneID:1102590;Name=NP_631211.1;Note=SC9A4.14%2C unknown%2C len: 274 aa. High content in alanine%2C arginine%2C glutamate and leucine amino acid residues;gbkey=CDS;gene=SC9A4.14;product=hypothetical protein;protein_id=NP_631211.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7946411	7946414	.	+	.	ID=id9280;gbkey=RBS
NC_003888.3	RefSeq	gene	7946421	7947839	.	+	.	ID=gene7216;Dbxref=GeneID:1102591;Name=SC9A4.15;gbkey=Gene;gene=SC9A4.15;gene_biotype=protein_coding;gene_synonym=SC9A4.15;locus_tag=SCO7153
NC_003888.3	RefSeq	CDS	7946421	7947839	.	+	0	ID=cds7084;Parent=gene7216;Dbxref=Genbank:NP_631212.1,GeneID:1102591;Name=NP_631212.1;Note=SC9A4.15%2C probable sugar transporter%2C len: 472 aa%3B identical to TR:Q9ZBQ1 (EMBL:AL034447) Streptomyces coelicolor sugar transporter SC7A1.22%2C 473 aa and highly similar to SW:GLCP_SYNY3 (EMBL:X15988) Synechocystis sp. glucose transport protein GlcP%2C 468 aa%3B fasta scores: opt: 1477 z-score: 1671.3 E(): 0%3B 50.6%25 identity in 468 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and matches to Prosite entries PS00012 Phosphopantetheine attachment site%2C PS00217 Sugar transport proteins signature 2 and PS00216 Sugar transport proteins signature 1. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9A4.15;product=sugar transporter;protein_id=NP_631212.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7946496	7947836	.	+	.	ID=id9281;Dbxref=GeneID:1102591;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 398.90%2C E-value 4.8e-116;gbkey=misc_feature;gene=SC9A4.15
NC_003888.3	RefSeq	sequence_feature	7946526	7946573	.	+	.	ID=id9282;Dbxref=GeneID:1102591;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC9A4.15
NC_003888.3	RefSeq	sequence_feature	7946784	7946861	.	+	.	ID=id9283;Dbxref=GeneID:1102591;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=SC9A4.15
NC_003888.3	RefSeq	sequence_feature	7947402	7947455	.	+	.	ID=id9284;Dbxref=GeneID:1102591;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC9A4.15
NC_003888.3	RefSeq	stem_loop	7947853	7947895	.	+	.	ID=id9285;Note=possible stem loop. Score 57: 19/19 (100%25) matches%2C 0 gap;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7947903	7948901	.	-	.	ID=gene7217;Dbxref=GeneID:1102592;Name=ilvC2;gbkey=Gene;gene=ilvC2;gene_biotype=protein_coding;gene_synonym=ilvC2,SC9A4.16c;locus_tag=SCO7154
NC_003888.3	RefSeq	CDS	7947903	7948901	.	-	0	ID=cds7085;Parent=gene7217;Dbxref=Genbank:NP_631213.1,GeneID:1102592;Name=NP_631213.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;gene=ilvC2;product=ketol-acid reductoisomerase;protein_id=NP_631213.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7947918	7948892	.	-	.	ID=id9286;Dbxref=GeneID:1102592;Note=Pfam match to entry PF01450 IlvC%2C Acetohydroxy acid isomeroreductase%2C score 770.90%2C E-value 5.1e-228;gbkey=misc_feature;gene=ilvC2
NC_003888.3	RefSeq	gene	7949234	7950301	.	+	.	ID=gene7218;Dbxref=GeneID:1102593;Name=SC9A4.17;gbkey=Gene;gene=SC9A4.17;gene_biotype=protein_coding;gene_synonym=SC9A4.17;locus_tag=SCO7155
NC_003888.3	RefSeq	CDS	7949234	7950301	.	+	0	ID=cds7086;Parent=gene7218;Dbxref=Genbank:NP_631214.1,GeneID:1102593;Name=NP_631214.1;Note=SC9A4.17%2C unknown%2C len: 355 aa;gbkey=CDS;gene=SC9A4.17;product=hypothetical protein;protein_id=NP_631214.1;transl_table=11
NC_003888.3	RefSeq	gene	7950408	7950953	.	-	.	ID=gene7219;Dbxref=GeneID:1102594;Name=SC9A4.18c;gbkey=Gene;gene=SC9A4.18c;gene_biotype=protein_coding;gene_synonym=SC9A4.18c;locus_tag=SCO7156
NC_003888.3	RefSeq	CDS	7950408	7950953	.	-	0	ID=cds7087;Parent=gene7219;Dbxref=Genbank:NP_631215.1,GeneID:1102594;Name=NP_631215.1;Note=SC9A4.18c%2C conserved hypothetical protein%2C len: 152 aa%3B similar to TR:Q9RRW9 (EMBL:AE002067) Deinococcus radiodurans conserved hypothetical protein DR2363%2C 160 aa%3B fasta scores: opt: 161 z-score: 210.3 E(): 0.0003%3B 34.0%25 identity in 147 aa overlap;gbkey=CDS;gene=SC9A4.18c;product=hypothetical protein;protein_id=NP_631215.1;transl_table=11
NC_003888.3	RefSeq	gene	7950950	7951531	.	-	.	ID=gene7220;Dbxref=GeneID:1102595;Name=SC9A4.19c;gbkey=Gene;gene=SC9A4.19c;gene_biotype=protein_coding;gene_synonym=SC9A4.19c;locus_tag=SCO7157
NC_003888.3	RefSeq	CDS	7950950	7951531	.	-	0	ID=cds7088;Parent=gene7220;Dbxref=Genbank:NP_631216.1,GeneID:1102595;Name=NP_631216.1;Note=SC9A4.19c%2C possible integral membrane protein%2C len: aa%3B similar to TR:Q9S277 (EMBL:AL096844) Streptomyces coelicolor  integral membrane protein SCI28.06c%2C 421 aa%3B fasta scores: opt: 1032 z-score: 1103.0 E(): 0%3B 77.2%25 identity in 189 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9A4.19c;product=hypothetical protein;protein_id=NP_631216.1;transl_table=11
NC_003888.3	RefSeq	gene	7951544	7953982	.	+	.	ID=gene7221;Dbxref=GeneID:1102596;Name=SC9A4.20;gbkey=Gene;gene=SC9A4.20;gene_biotype=protein_coding;gene_synonym=SC9A4.20;locus_tag=SCO7158
NC_003888.3	RefSeq	CDS	7951544	7953982	.	+	0	ID=cds7089;Parent=gene7221;Dbxref=Genbank:NP_631217.1,GeneID:1102596;Name=NP_631217.1;Note=SC9A4.20%2C conserved hypothetical protein%2C len: 812 aa%3B similar to TR:Q9RJC6 (EMBL:AL133171) Streptomyces coelicolor hypothetical 89.7 kDa protein SCF81.26%2C 835 aa%3B fasta scores: opt: 1262 z-score: 1348.6 E(): 0%3B 37.3%25 identity in 808 aa overlap. Contains 2x Pfam matches to entry PF00989 PAS%2C PAS domain%2C Pfam match to PF00785 PAC%2C PAC motif and match to Prosite entry PS00213 Lipocalin signature;gbkey=CDS;gene=SC9A4.20;product=hypothetical protein;protein_id=NP_631217.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7951607	7951738	.	+	.	ID=id9287;Dbxref=GeneID:1102596;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 4.60%2C E-value 12;gbkey=misc_feature;gene=SC9A4.20
NC_003888.3	RefSeq	sequence_feature	7951760	7951867	.	+	.	ID=id9288;Dbxref=GeneID:1102596;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 34.90%2C E-value 2.5e-08;gbkey=misc_feature;gene=SC9A4.20
NC_003888.3	RefSeq	sequence_feature	7951901	7952032	.	+	.	ID=id9289;Dbxref=GeneID:1102596;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 22.40%2C E-value 0.00014;gbkey=misc_feature;gene=SC9A4.20
NC_003888.3	RefSeq	sequence_feature	7952852	7952890	.	+	.	ID=id9290;Dbxref=GeneID:1102596;Note=PS00213 Lipocalin signature;gbkey=misc_feature;gene=SC9A4.20
NC_003888.3	RefSeq	gene	7954049	7955986	.	+	.	ID=gene7222;Dbxref=GeneID:1102597;Name=SC9A4.21;gbkey=Gene;gene=SC9A4.21;gene_biotype=protein_coding;gene_synonym=SC9A4.21;locus_tag=SCO7159
NC_003888.3	RefSeq	CDS	7954049	7955986	.	+	0	ID=cds7090;Parent=gene7222;Dbxref=Genbank:NP_631218.1,GeneID:1102597;Name=NP_631218.1;Note=SC9A4.21%2C possible integral membrane protein%2C len: 645 aa%3B similar to TR:O32225 (EMBL:Z99121) Bacillus subtilis YvaC protein%2C 631 aa%3B fasta scores: opt: 402 z-score: 435.7 E(): 8.4e-17%3B 23.8%25 identity in 627 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9A4.21;product=hypothetical protein;protein_id=NP_631218.1;transl_table=11
NC_003888.3	RefSeq	gene	7956000	7956833	.	-	.	ID=gene7223;Dbxref=GeneID:1102598;Name=SC9A4.22c;gbkey=Gene;gene=SC9A4.22c;gene_biotype=protein_coding;gene_synonym=SC9A4.22c;locus_tag=SCO7160
NC_003888.3	RefSeq	CDS	7956000	7956833	.	-	0	ID=cds7091;Parent=gene7223;Dbxref=Genbank:NP_631219.1,GeneID:1102598;Name=NP_631219.1;Note=SC9A4.22c%2C conserved hypothetical protein%2C len: 277 aa%3B similar to TR:Q9RJW0 (EMBL:AL117387) Streptomyces coelicolor hypothetical 31.6 kDa protein SCF41.09%2C 294 aa%3B fasta scores: opt: 504 z-score: 582.4 E(): 5.7e-25%3B 38.1%25 identity in 281 aa overlap;gbkey=CDS;gene=SC9A4.22c;product=hypothetical protein;protein_id=NP_631219.1;transl_table=11
NC_003888.3	RefSeq	gene	7956843	7957625	.	-	.	ID=gene7224;Dbxref=GeneID:1102599;Name=SC9A4.23c;gbkey=Gene;gene=SC9A4.23c;gene_biotype=protein_coding;gene_synonym=SC9A4.23c;locus_tag=SCO7161
NC_003888.3	RefSeq	CDS	7956843	7957625	.	-	0	ID=cds7092;Parent=gene7224;Dbxref=Genbank:NP_631220.1,GeneID:1102599;Name=NP_631220.1;Note=SC9A4.23c%2C probable 3-oxoacyl-[acyl-carrier protein] reductase%2C len: 260 aa%3B similar to SW:FABG_ECOLI (EMBL:M84991) Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) FabG%2C 244 aa%3B fasta scores: opt: 453 z-score: 474.7 E(): 5.6e-19%3B 34.4%25 identity in 247 aa overlap and to TR:Q9RJV4 (EMBL:AL117387) Streptomyces coelicolor probable oxidoreductase SCF41.15%2C 263 aa%3B fasta scores: opt: 1092 z-score: 881.9 E(): 0%3B 72.5%25 identity in 251 aa overlap. Contains Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus and match to Prosite entry PS00061 Short-chain dehydrogenases/reductases family signature. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC9A4.23c;product=3-oxoacyl-ACP reductase;protein_id=NP_631220.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7956885	7956977	.	-	.	ID=id9291;Dbxref=GeneID:1102599;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 39.30%2C E-value 1.9e-09;gbkey=misc_feature;gene=SC9A4.23c
NC_003888.3	RefSeq	sequence_feature	7957053	7957577	.	-	.	ID=id9292;Dbxref=GeneID:1102599;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 223.80%2C E-value 2.4e-63;gbkey=misc_feature;gene=SC9A4.23c
NC_003888.3	RefSeq	sequence_feature	7957116	7957202	.	-	.	ID=id9293;Dbxref=GeneID:1102599;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC9A4.23c
NC_003888.3	RefSeq	ribosome_entry_site	7957635	7957638	.	-	.	ID=id9294;gbkey=RBS
NC_003888.3	RefSeq	gene	7957724	7958647	.	-	.	ID=gene7225;Dbxref=GeneID:1102600;Name=SC9A4.24c;gbkey=Gene;gene=SC9A4.24c;gene_biotype=protein_coding;gene_synonym=SC9A4.24c;locus_tag=SCO7162
NC_003888.3	RefSeq	CDS	7957724	7958647	.	-	0	ID=cds7093;Parent=gene7225;Dbxref=Genbank:NP_631221.1,GeneID:1102600;Name=NP_631221.1;Note=SC9A4.24c%2C possible oxidoreductase%2C len: 307 aa%3B similar to TR:Q9RJW1 (EMBL:AL117387) Streptomyces coelicolor possible oxidoreductase SCF41.08%2C 334 aa%3B fasta scores: opt: 705 z-score: 808.0 E(): 0%3B 48.1%25 identity in 314 aa overlap;gbkey=CDS;gene=SC9A4.24c;product=oxidoreductase;protein_id=NP_631221.1;transl_table=11
NC_003888.3	RefSeq	gene	7958644	7959456	.	-	.	ID=gene7226;Dbxref=GeneID:1102601;Name=SC9A4.25c;gbkey=Gene;gene=SC9A4.25c;gene_biotype=protein_coding;gene_synonym=SC9A4.25c;locus_tag=SCO7163
NC_003888.3	RefSeq	CDS	7958644	7959456	.	-	0	ID=cds7094;Parent=gene7226;Dbxref=Genbank:NP_631222.1,GeneID:1102601;Name=NP_631222.1;Note=SC9A4.25c%2C possible transferase%2C len: 270 aa%3B similar to TR:CAB87566 (EMBL:AJ277295) Sphingomonas sp. acyl transferase FldZ protein%2C 224 aa%3B fasta scores: opt: 286 z-score: 338.7 E(): 2.1e-11%3B 27.4%25 identity in 223 aa overlap;gbkey=CDS;gene=SC9A4.25c;product=transferase;protein_id=NP_631222.1;transl_table=11
NC_003888.3	RefSeq	gene	7959459	7961477	.	-	.	ID=gene7227;Dbxref=GeneID:1102602;Name=SC9A4.26c;gbkey=Gene;gene=SC9A4.26c;gene_biotype=protein_coding;gene_synonym=SC9A4.26c;locus_tag=SCO7164
NC_003888.3	RefSeq	CDS	7959459	7961477	.	-	0	ID=cds7095;Parent=gene7227;Dbxref=Genbank:NP_631223.1,GeneID:1102602;Name=NP_631223.1;Note=SC9A4.26c%2C unknown%2C len: 672 aa;gbkey=CDS;gene=SC9A4.26c;product=hypothetical protein;protein_id=NP_631223.1;transl_table=11
NC_003888.3	RefSeq	gene	7961479	7962390	.	-	.	ID=gene7228;Dbxref=GeneID:1102603;Name=SC9A4.27c;gbkey=Gene;gene=SC9A4.27c;gene_biotype=protein_coding;gene_synonym=SC9A4.27c;locus_tag=SCO7165
NC_003888.3	RefSeq	CDS	7961479	7962390	.	-	0	ID=cds7096;Parent=gene7228;Dbxref=Genbank:NP_631224.1,GeneID:1102603;Name=NP_631224.1;Note=SC9A4.27c%2C probable sugar-binding integral membrane transport protein%2C len: 319 aa%3B similar to TR:Q9RJV6 (EMBL:AL117387) Streptomyces coelicolor binding-protein-dependent transport protein SCF41.13%2C 280 aa%3B fasta scores: opt: 1039 z-score: 1201.7 E(): 0%3B 57.2%25 identity in 264 aa overlap and to SW:MSMG_STRMU (EMBL:M77351) Streptococcus mutans multiple sugar-binding transport system permease MsmG%2C 277 aa%3B fasta scores: opt: 512 z-score: 596.7 E(): 9.1e-26%3B 32.4%25 identity in 275 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9A4.27c;product=sugar-binding integral membrane transport protein;protein_id=NP_631224.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7961623	7961835	.	-	.	ID=id9295;Dbxref=GeneID:1102603;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 58.30%2C E-value 1.7e-13;gbkey=misc_feature;gene=SC9A4.27c
NC_003888.3	RefSeq	sequence_feature	7961746	7961832	.	-	.	ID=id9296;Dbxref=GeneID:1102603;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC9A4.27c
NC_003888.3	RefSeq	gene	7962441	7963373	.	-	.	ID=gene7229;Dbxref=GeneID:1102604;Name=SC9A4.28c;gbkey=Gene;gene=SC9A4.28c;gene_biotype=protein_coding;gene_synonym=SC9A4.28c;locus_tag=SCO7166
NC_003888.3	RefSeq	CDS	7962441	7963373	.	-	0	ID=cds7097;Parent=gene7229;Dbxref=Genbank:NP_631225.1,GeneID:1102604;Name=NP_631225.1;Note=SC9A4.28c%2C probable sugar-transporter integral membrane protein%2C len: 310 aa%3B similar to TR:Q9RJV7 (EMBL:AL117387) Streptomyces coelicolor binding protein dependent transport protein SCF41.12%2C 303 aa%3B fasta scores: opt: 913 z-score: 1073.6 E(): 0%3B 46.9%25 identity in 309 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9A4.28c;product=sugar-transporter integral membrane protein;protein_id=NP_631225.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7962561	7962794	.	-	.	ID=id9297;Dbxref=GeneID:1102604;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 71.10%2C E-value 2.3e-17;gbkey=misc_feature;gene=SC9A4.28c
NC_003888.3	RefSeq	sequence_feature	7962705	7962791	.	-	.	ID=id9298;Dbxref=GeneID:1102604;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC9A4.28c
NC_003888.3	RefSeq	gene	7963370	7964647	.	-	.	ID=gene7230;Dbxref=GeneID:1102605;Name=SC9A4.29c;gbkey=Gene;gene=SC9A4.29c;gene_biotype=protein_coding;gene_synonym=SC9A4.29c;locus_tag=SCO7167
NC_003888.3	RefSeq	CDS	7963370	7964647	.	-	0	ID=cds7098;Parent=gene7230;Dbxref=Genbank:NP_631226.1,GeneID:1102605;Name=NP_631226.1;Note=SC9A4.29c%2C probable  sugar-binding protein%2C len: 425 aa%3B similar to TR:Q9RJV8 (EMBL:AL117387) Streptomyces coelicolor  solute-binding protein SCF41.11%2C 422 aa%3B fasta scores: opt: 946 z-score: 1081.0 E(): 0%3B 40.1%25 identity in 419 aa overlap and to SW:MSME_STRMU (EMBL:M77351) Streptococcus mutans multiple sugar-binding protein precursor MsmE%2C 420 aa%3B fasta scores: opt: 233 z-score: 268.9 E(): 1.6e-07%3B 25.3%25 identity in 297 aa overlap. Contains 2x Pfam matches to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC9A4.29c;product=sugar-binding protein;protein_id=NP_631226.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7963619	7963942	.	-	.	ID=id9299;Dbxref=GeneID:1102605;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 43.60%2C E-value 3.1e-11;gbkey=misc_feature;gene=SC9A4.29c
NC_003888.3	RefSeq	sequence_feature	7964030	7964236	.	-	.	ID=id9300;Dbxref=GeneID:1102605;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 24.90%2C E-value 5.6e-06;gbkey=misc_feature;gene=SC9A4.29c
NC_003888.3	RefSeq	sequence_feature	7964579	7964611	.	-	.	ID=id9301;Dbxref=GeneID:1102605;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC9A4.29c
NC_003888.3	RefSeq	ribosome_entry_site	7964653	7964657	.	-	.	ID=id9302;gbkey=RBS
NC_003888.3	RefSeq	gene	7964783	7965457	.	+	.	ID=gene7231;Dbxref=GeneID:1102606;Name=SC9A4.30;gbkey=Gene;gene=SC9A4.30;gene_biotype=protein_coding;gene_synonym=SC9A4.30;locus_tag=SCO7168
NC_003888.3	RefSeq	CDS	7964783	7965457	.	+	0	ID=cds7099;Parent=gene7231;Dbxref=Genbank:NP_631227.1,GeneID:1102606;Name=NP_631227.1;Note=SC9A4.30%2C probable gntR-family transcriptional regulator%2C len: 224 aa%3B similar to TR:Q9XA67 (EMBL:AL096822) Streptomyces coelicolor gntR-family transcriptional regulator SCGD3.11c%2C 216 aa%3B fasta scores: opt: 305 z-score: 351.3 E(): 4.2e-12%3B 32.7%25 identity in 196 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family. Also contains possible helix-turn-helix motif at residues 36..57 (+3.11 SD);gbkey=CDS;gene=SC9A4.30;product=GntR family transcriptional regulator;protein_id=NP_631227.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7964831	7965007	.	+	.	ID=id9303;Dbxref=GeneID:1102606;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 50.80%2C E-value 4e-14;gbkey=misc_feature;gene=SC9A4.30
NC_003888.3	RefSeq	gene	7965442	7965876	.	-	.	ID=gene7232;Dbxref=GeneID:1102607;Name=SC9A4.31c;gbkey=Gene;gene=SC9A4.31c;gene_biotype=protein_coding;gene_synonym=SC9A4.31c;locus_tag=SCO7169
NC_003888.3	RefSeq	CDS	7965442	7965876	.	-	0	ID=cds7100;Parent=gene7232;Dbxref=Genbank:NP_631228.1,GeneID:1102607;Name=NP_631228.1;Note=SC9A4.31c%2C unknown%2C len: 144 aa. Highly hydrophilic. Contains 2x conserved repeat AGSGNT and high content in G+C (78.24%25);gbkey=CDS;gene=SC9A4.31c;product=hypothetical protein;protein_id=NP_631228.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	7965703	7965738	.	-	.	ID=id9304;Dbxref=GeneID:1102607;Note=2x conserved repeat translated in SC9A4.31c;gbkey=repeat_region;gene=SC9A4.31c
NC_003888.3	RefSeq	gene	7966015	7968375	.	+	.	ID=gene7233;Dbxref=GeneID:1102608;Name=SC9A4.32;gbkey=Gene;gene=SC9A4.32;gene_biotype=protein_coding;gene_synonym=SC9A4.32;locus_tag=SCO7170
NC_003888.3	RefSeq	CDS	7966015	7968375	.	+	0	ID=cds7101;Parent=gene7233;Dbxref=Genbank:NP_631229.1,GeneID:1102608;Name=NP_631229.1;Note=SC9A4.32%2C possible  sugar hydrolase%2C len: 786 aa%3B C-terminal region similar to TR:O88021 (EMBL:AL031107) Streptomyces coelicolor  glucosidase SC5A7.15c%2C 466 aa%3B fasta scores: opt: 270 z-score: 286.2 E(): 1.8e-08%3B 27.2%25 identity in 427 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC9A4.32;product=sugar hydrolase;protein_id=NP_631229.1;transl_table=11
NC_003888.3	RefSeq	gene	7968419	7968850	.	-	.	ID=gene7234;Dbxref=GeneID:1102609;Name=SC9A4.33c;gbkey=Gene;gene=SC9A4.33c;gene_biotype=protein_coding;gene_synonym=SC9A4.33c;locus_tag=SCO7171
NC_003888.3	RefSeq	CDS	7968419	7968850	.	-	0	ID=cds7102;Parent=gene7234;Dbxref=Genbank:NP_631230.1,GeneID:1102609;Name=NP_631230.1;Note=SC9A4.33c%2C possible lyase%2C len: 143 aa%3B similar to TR:O86701 (EMBL:AL031515) Streptomyces coelicolor lyase SC5C7.04%2C 138 aa%3B fasta scores: opt: 119 z-score: 158.2 E(): 0.24%3B 30.6%25 identity in 134 aa overlap;gbkey=CDS;gene=SC9A4.33c;product=lyase;protein_id=NP_631230.1;transl_table=11
NC_003888.3	RefSeq	gene	7969170	7969406	.	+	.	ID=gene7235;Dbxref=GeneID:1102610;Name=SC9A4.34;gbkey=Gene;gene=SC9A4.34;gene_biotype=protein_coding;gene_synonym=SC9A4.34;locus_tag=SCO7172
NC_003888.3	RefSeq	CDS	7969170	7969406	.	+	0	ID=cds7103;Parent=gene7235;Dbxref=Genbank:NP_631231.1,GeneID:1102610;Name=NP_631231.1;Note=SC9A4.34%2C possible membrane protein%2C len: 78 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC9A4.34;product=hypothetical protein;protein_id=NP_631231.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7969426	7969468	.	+	.	ID=id9305;Note=possible stem loop. Score 63: 21/21 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7969712	7972438	.	+	.	ID=gene7236;Dbxref=GeneID:1102611;Name=SC8A11.01;gbkey=Gene;gene=SC8A11.01;gene_biotype=protein_coding;gene_synonym=SC8A11.01,SC9A4.35;locus_tag=SCO7173
NC_003888.3	RefSeq	CDS	7969712	7972438	.	+	0	ID=cds7104;Parent=gene7236;Dbxref=Genbank:NP_733725.1,GeneID:1102611;Name=NP_733725.1;Note=SC8A11.01%2C possible transcriptional regulator (fragment)%2C len: >750 aa%3B similar to TR:Q9S1Z4 (EMBL:AL109747) Streptomyces coelicolor probable transcriptional regulator SCJ21.13%2C 919 aa%3B fasta scores: opt: 818 z-score: 913.7 E(): 0%3B 32.6%25 identity in 775 aa overlap. Contains Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains a possible helix-turn-helix motif at residues 699..720 (+3.25 SD)~SC9A4.35%2C possible regulatory protein (fragment)%2C len: >191 aa%3B similar to N-terminal region of TR:Q9S1Z4 (EMBL:AL109747) Streptomyces coelicolor probable transcriptional regulator SCJ21.13%2C 919 aa%3B fasta scores: opt: 470 z-score: 538.6 E(): 1.6e-22%3B 44.4%25 identity in 187 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC8A11.01;product=transcriptional regulator;protein_id=NP_733725.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7969799	7969822	.	+	.	ID=id9306;Dbxref=GeneID:1102611;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8A11.01
NC_003888.3	RefSeq	sequence_feature	7972226	7972423	.	+	.	ID=id9307;Dbxref=GeneID:1102611;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 49.10%2C E-value 9.7e-11;gbkey=misc_feature;gene=SC8A11.01
NC_003888.3	RefSeq	sequence_feature	7972277	7972360	.	+	.	ID=id9308;Dbxref=GeneID:1102611;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC8A11.01
NC_003888.3	RefSeq	gene	7972368	7972637	.	-	.	ID=gene7237;Dbxref=GeneID:1102612;Name=SC8A11.02c;gbkey=Gene;gene=SC8A11.02c;gene_biotype=protein_coding;gene_synonym=SC8A11.02c;locus_tag=SCO7174
NC_003888.3	RefSeq	CDS	7972368	7972637	.	-	0	ID=cds7105;Parent=gene7237;Dbxref=Genbank:NP_631232.1,GeneID:1102612;Name=NP_631232.1;Note=SC8A11.02c%2C unknown%2C len: 89 aa;gbkey=CDS;gene=SC8A11.02c;product=hypothetical protein;protein_id=NP_631232.1;transl_table=11
NC_003888.3	RefSeq	gene	7972971	7973441	.	+	.	ID=gene7238;Dbxref=GeneID:1102613;Name=SC8A11.03;gbkey=Gene;gene=SC8A11.03;gene_biotype=protein_coding;gene_synonym=SC8A11.03;locus_tag=SCO7175
NC_003888.3	RefSeq	CDS	7972971	7973441	.	+	0	ID=cds7106;Parent=gene7238;Dbxref=Genbank:NP_631233.1,GeneID:1102613;Name=NP_631233.1;Note=SC8A11.03%2C possible regulator%2C len: 156 aa%3B similar to TR:Q9S2F7 (EMBL:AL096852) Streptomyces coelicolor regulator SCE19A.24%2C 142 aa%3B fasta scores: opt: 272 z-score: 353.0 E(): 3.4e-12%3B 36.9%25 identity in 130 aa overlap;gbkey=CDS;gene=SC8A11.03;product=regulator;protein_id=NP_631233.1;transl_table=11
NC_003888.3	RefSeq	gene	7973481	7977242	.	-	.	ID=gene7239;Dbxref=GeneID:1102614;Name=SC8A11.04c;gbkey=Gene;gene=SC8A11.04c;gene_biotype=protein_coding;gene_synonym=SC8A11.04c;locus_tag=SCO7176
NC_003888.3	RefSeq	CDS	7973481	7977242	.	-	0	ID=cds7107;Parent=gene7239;Dbxref=Genbank:NP_631234.1,GeneID:1102614;Name=NP_631234.1;Note=SC8A11.04c%2C probable  peptidase%2C len: 1253 aa%3B similar to TR:Q9RL54 (EMBL:AL121596) Streptomyces coelicolor probable  peptidase SCF51A.10%2C 1245 aa%3B fasta scores: opt: 1827 z-score: 1848.3 E(): 0%3B 37.2%25 identity in 1300 aa overlap%2C to TR:P95684 (EMBL:D83672) Streptomyces albogriseolus subtilisin-like protease%2C 1102 aa%3B fasta scores: opt: 1365 z-score: 1380.6 E(): 0%3B 33.4%25 identity in 1268 aa overlap and to Streptomyces coelicolor probable  peptidase SC8A11.16c%2C 1239 aa%3B fasta scores: opt: 1835 z-score: 1467.4 E(): 0%3B 46.9%25 identity in 1279 aa overlap. Contains Pfam matches to entries PF00082 Peptidase_S8%2C Subtilase family and PF02225 PA%2C PA domain and matches to Prosite entries PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site%2C PS00137 Serine proteases%2C subtilase family%2C histidine active site and PS00138 Serine proteases%2C subtilase family%2C serine active site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A11.04c;product=peptidase;protein_id=NP_631234.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7974558	7974797	.	-	.	ID=id9309;Dbxref=GeneID:1102614;Note=Pfam match to entry PF02225 PA%2C PA domain%2C score 19.00%2C E-value 0.058;gbkey=misc_feature;gene=SC8A11.04c
NC_003888.3	RefSeq	sequence_feature	7975704	7976600	.	-	.	ID=id9310;Dbxref=GeneID:1102614;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 199.50%2C E-value 5e-56;gbkey=misc_feature;gene=SC8A11.04c
NC_003888.3	RefSeq	sequence_feature	7975848	7975880	.	-	.	ID=id9311;Dbxref=GeneID:1102614;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site;gbkey=misc_feature;gene=SC8A11.04c
NC_003888.3	RefSeq	sequence_feature	7976376	7976408	.	-	.	ID=id9312;Dbxref=GeneID:1102614;Note=PS00137 Serine proteases%2C subtilase family%2C histidine active site;gbkey=misc_feature;gene=SC8A11.04c
NC_003888.3	RefSeq	sequence_feature	7976481	7976516	.	-	.	ID=id9313;Dbxref=GeneID:1102614;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SC8A11.04c
NC_003888.3	RefSeq	ribosome_entry_site	7977247	7977252	.	-	.	ID=id9314;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7977470	7977473	.	+	.	ID=id9315;gbkey=RBS
NC_003888.3	RefSeq	gene	7977478	7978122	.	+	.	ID=gene7240;Dbxref=GeneID:1102615;Name=SC8A11.05;gbkey=Gene;gene=SC8A11.05;gene_biotype=protein_coding;gene_synonym=SC8A11.05;locus_tag=SCO7177
NC_003888.3	RefSeq	CDS	7977478	7978122	.	+	0	ID=cds7108;Parent=gene7240;Dbxref=Genbank:NP_631235.1,GeneID:1102615;Name=NP_631235.1;Note=SC8A11.05%2C unknown%2C len: 214 aa;gbkey=CDS;gene=SC8A11.05;product=hypothetical protein;protein_id=NP_631235.1;transl_table=11
NC_003888.3	RefSeq	gene	7978110	7978478	.	+	.	ID=gene7241;Dbxref=GeneID:1102616;Name=SC8A11.06;gbkey=Gene;gene=SC8A11.06;gene_biotype=protein_coding;gene_synonym=SC8A11.06;locus_tag=SCO7178
NC_003888.3	RefSeq	CDS	7978110	7978478	.	+	0	ID=cds7109;Parent=gene7241;Dbxref=Genbank:NP_631236.1,GeneID:1102616;Name=NP_631236.1;Note=SC8A11.06%2C probable transcriptional regulatory protein%2C len: 122 aa%3B similar to SW:BRPA_STRHY (EMBL:M64783) Streptomyces hygroscopicus bialaphos biosynthetic pathway regulatory protein BrpA%2C 256 aa%3B fasta scores: opt: 165 z-score: 209.2 E(): 0.00035%3B 34.4%25 identity in 122 aa overlap. Contains possible helix-turn-helix motif at residues 77..98 (+4.46 SD);gbkey=CDS;gene=SC8A11.06;product=transcriptional regulator;protein_id=NP_631236.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7978836	7978882	.	-	.	ID=id9316;Note=possible stem loop. Score 52: 20/22 (90%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7978957	7980885	.	-	.	ID=gene7242;Dbxref=GeneID:1102617;Name=SC8A11.07c;gbkey=Gene;gene=SC8A11.07c;gene_biotype=protein_coding;gene_synonym=SC8A11.07c;locus_tag=SCO7179
NC_003888.3	RefSeq	CDS	7978957	7980885	.	-	0	ID=cds7110;Parent=gene7242;Dbxref=Genbank:NP_631237.1,GeneID:1102617;Name=NP_631237.1;Note=SC8A11.07c%2C possible  amidase%2C len: 642 aa%3B similar to TR:Q9S2M7 (EMBL:AL109661) Streptomyces coelicolor hypothetical 100.7 kDa protein SC6E10.10%2C 943 aa%3B fasta scores: opt: 1082 z-score: 1143.6 E(): 0%3B 40.2%25 identity in 684 aa overlap and to SW:CWHA_ACHLY Achromobacter lyticus N-acetylmuramoyl-L-alanine amidase A (EC 3.5.1.28) CwhA%2C 177 aa%3B fasta scores: opt: 214 z-score: 235.8 E(): 1.1e-05%3B 29.4%25 identity in 160 aa overlap. Contains Pfam match to entry PF01510 Amidase_2%2C N-acetylmuramoyl-L-alanine amidase. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A11.07c;product=amidase;protein_id=NP_631237.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7979680	7980123	.	-	.	ID=id9317;Dbxref=GeneID:1102617;Note=Pfam match to entry PF01510 Amidase_2%2C N-acetylmuramoyl-L-alanine amidase%2C score 37.50%2C E-value 3.1e-07;gbkey=misc_feature;gene=SC8A11.07c
NC_003888.3	RefSeq	ribosome_entry_site	7980893	7980898	.	-	.	ID=id9318;gbkey=RBS
NC_003888.3	RefSeq	gene	7981070	7981423	.	-	.	ID=gene7243;Dbxref=GeneID:1102618;Name=SC8A11.08c;gbkey=Gene;gene=SC8A11.08c;gene_biotype=protein_coding;gene_synonym=SC8A11.08c;locus_tag=SCO7180
NC_003888.3	RefSeq	CDS	7981070	7981423	.	-	0	ID=cds7111;Parent=gene7243;Dbxref=Genbank:NP_631238.1,GeneID:1102618;Name=NP_631238.1;Note=SC8A11.08c%2C hypothetical protein%2C len: 117 aa%3B similar to TR:AAF70105 (EMBL:AF257324) Streptomyces galilaeus polyketide oxygenase AknX%2C 122 aa%3B fasta scores: opt: 151 z-score: 213.3 E(): 0.00021%3B 34.3%25 identity in 105 aa overlap;gbkey=CDS;gene=SC8A11.08c;product=hypothetical protein;protein_id=NP_631238.1;transl_table=11
NC_003888.3	RefSeq	gene	7981617	7982402	.	+	.	ID=gene7244;Dbxref=GeneID:1102619;Name=SC8A11.09;gbkey=Gene;gene=SC8A11.09;gene_biotype=protein_coding;gene_synonym=SC8A11.09;locus_tag=SCO7181
NC_003888.3	RefSeq	CDS	7981617	7982402	.	+	0	ID=cds7112;Parent=gene7244;Dbxref=Genbank:NP_631239.1,GeneID:1102619;Name=NP_631239.1;Note=SC8A11.09%2C probable branched amino acid transport system ATP-binding protein%2C len: 261 aa%3B similar to SW:LIVG_ECOLI (EMBL:J05516) Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG%2C 255 aa%3B fasta scores: opt: 586 z-score: 615.7 E(): 7.9e-27%3B 41.6%25 identity in 250 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC8A11.09;product=ABC transporter ATP-binding protein;protein_id=NP_631239.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7981725	7982321	.	+	.	ID=id9319;Dbxref=GeneID:1102619;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 200.30%2C E-value 3e-56;gbkey=misc_feature;gene=SC8A11.09
NC_003888.3	RefSeq	sequence_feature	7981746	7981769	.	+	.	ID=id9320;Dbxref=GeneID:1102619;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8A11.09
NC_003888.3	RefSeq	ribosome_entry_site	7982392	7982396	.	+	.	ID=id9321;Dbxref=GeneID:1102619;gbkey=RBS;gene=SC8A11.09
NC_003888.3	RefSeq	gene	7982399	7983112	.	+	.	ID=gene7245;Dbxref=GeneID:1102620;Name=SC8A11.10;gbkey=Gene;gene=SC8A11.10;gene_biotype=protein_coding;gene_synonym=SC8A11.10;locus_tag=SCO7182
NC_003888.3	RefSeq	CDS	7982399	7983112	.	+	0	ID=cds7113;Parent=gene7245;Dbxref=Genbank:NP_631240.1,GeneID:1102620;Name=NP_631240.1;Note=SC8A11.10%2C probable branched amino acid transport system ATP-binding protein%2C len: 237 aa%3B similar to SW:LIVF_ECOLI (EMBL:J05516) Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF%2C 237 aa%3B fasta scores: opt: 687 z-score: 739.1 E(): 0%3B 50.7%25 identity in 223 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC8A11.10;product=ABC transporter ATP-binding protein;protein_id=NP_631240.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7982486	7983028	.	+	.	ID=id9322;Dbxref=GeneID:1102620;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 179.50%2C E-value 5.3e-50;gbkey=misc_feature;gene=SC8A11.10
NC_003888.3	RefSeq	sequence_feature	7982507	7982530	.	+	.	ID=id9323;Dbxref=GeneID:1102620;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8A11.10
NC_003888.3	RefSeq	sequence_feature	7982801	7982845	.	+	.	ID=id9324;Dbxref=GeneID:1102620;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC8A11.10
NC_003888.3	RefSeq	gene	7983160	7984032	.	+	.	ID=gene7246;Dbxref=GeneID:1102621;Name=SC8A11.11;gbkey=Gene;gene=SC8A11.11;gene_biotype=protein_coding;gene_synonym=SC8A11.11;locus_tag=SCO7183
NC_003888.3	RefSeq	CDS	7983160	7984032	.	+	0	ID=cds7114;Parent=gene7246;Dbxref=Genbank:NP_631241.1,GeneID:1102621;Name=NP_631241.1;Note=SC8A11.11%2C probable branched amino acid transport system permease%2C len: 290 aa%3B similar to SW:LIVH_ECOLI (EMBL:J05516) Escherichia coli high-affinity branched-chain amino acid transport system permease LivH%2C 308 aa%3B fasta scores: opt: 427 z-score: 471.1 E(): 9e-19%3B 34.4%25 identity in 305 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8A11.11;product=branched amino acid transport system permease;protein_id=NP_631241.1;transl_table=11
NC_003888.3	RefSeq	gene	7984035	7985084	.	+	.	ID=gene7247;Dbxref=GeneID:1102622;Name=SC8A11.12;gbkey=Gene;gene=SC8A11.12;gene_biotype=protein_coding;gene_synonym=SC8A11.12;locus_tag=SCO7184
NC_003888.3	RefSeq	CDS	7984035	7985084	.	+	0	ID=cds7115;Parent=gene7247;Dbxref=Genbank:NP_631242.1,GeneID:1102622;Name=NP_631242.1;Note=SC8A11.12%2C probable branched amino acid transport system permease%2C len: 349 aa%3B similar to SW:LIVM_ECOLI (EMBL:J05516) Escherichia coli high-affinity branched-chain amino acid transport system permease%2C LivM%2C 425 aa%3B fasta scores: opt: 254 z-score: 285.7 E(): 1.9e-08%3B 28.1%25 identity in 360 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8A11.12;product=branched amino acid transport system permease;protein_id=NP_631242.1;transl_table=11
NC_003888.3	RefSeq	gene	7985081	7986271	.	+	.	ID=gene7248;Dbxref=GeneID:1102623;Name=SC8A11.13;gbkey=Gene;gene=SC8A11.13;gene_biotype=protein_coding;gene_synonym=SC8A11.13;locus_tag=SCO7185
NC_003888.3	RefSeq	CDS	7985081	7986271	.	+	0	ID=cds7116;Parent=gene7248;Dbxref=Genbank:NP_631243.1,GeneID:1102623;Name=NP_631243.1;Note=SC8A11.13%2C probable branched amino acid binding hypothetical protein%2C len: 396 aa%3B similar to SW:LIVK_ECOLI (EMBL:M29378) Escherichia coli leucine-specific binding protein precursor LivK%2C 369 aa%3B fasta scores: opt: 233 z-score: 262.9 E(): 3.6e-07%3B 24.7%25 identity in 360 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A11.13;product=branched amino acid binding hypothetical protein;protein_id=NP_631243.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7985120	7985152	.	+	.	ID=id9325;Dbxref=GeneID:1102623;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC8A11.13
NC_003888.3	RefSeq	ribosome_entry_site	7986320	7986324	.	+	.	ID=id9326;gbkey=RBS
NC_003888.3	RefSeq	gene	7986335	7986640	.	+	.	ID=gene7249;Dbxref=GeneID:1102624;Name=SC8A11.14;gbkey=Gene;gene=SC8A11.14;gene_biotype=protein_coding;gene_synonym=SC8A11.14;locus_tag=SCO7186
NC_003888.3	RefSeq	CDS	7986335	7986640	.	+	0	ID=cds7117;Parent=gene7249;Dbxref=Genbank:NP_631244.1,GeneID:1102624;Name=NP_631244.1;Note=SC8A11.14%2C possible integral membrane protein%2C len: 101 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8A11.14;product=hypothetical protein;protein_id=NP_631244.1;transl_table=11
NC_003888.3	RefSeq	gene	7986672	7988690	.	-	.	ID=gene7250;Dbxref=GeneID:1102625;Name=SC8A11.15c;gbkey=Gene;gene=SC8A11.15c;gene_biotype=protein_coding;gene_synonym=SC8A11.15c;locus_tag=SCO7187
NC_003888.3	RefSeq	CDS	7986672	7988690	.	-	0	ID=cds7118;Parent=gene7250;Dbxref=Genbank:NP_631245.1,GeneID:1102625;Name=NP_631245.1;Note=SC8A11.15c%2C possible lipoprotein%2C len: 672 aa%3B similar to TR:Q98LR9 (EMBL:AP002996) Rhizobium loti probable hypothetical protein MLL0907%2C 622 aa%3B fasta scores: opt: 1110 Z-score: 1188.9 E(): 1.4e-58%3B 33.122%25 identity in 631 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A11.15c;product=lipoprotein;protein_id=NP_631245.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7988586	7988618	.	-	.	ID=id9327;Dbxref=GeneID:1102625;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC8A11.15c
NC_003888.3	RefSeq	gene	7988871	7992590	.	-	.	ID=gene7251;Dbxref=GeneID:1102626;Name=SC8A11.16c;gbkey=Gene;gene=SC8A11.16c;gene_biotype=protein_coding;gene_synonym=SC8A11.16c;locus_tag=SCO7188
NC_003888.3	RefSeq	CDS	7988871	7992590	.	-	0	ID=cds7119;Parent=gene7251;Dbxref=Genbank:NP_631246.1,GeneID:1102626;Name=NP_631246.1;Note=SC8A11.16c%2C possible  peptidase%2C len: 1210 aa%3B similar to TR:CAB86111 (EMBL:AL163003) Streptomyces coelicolor   peptidase SCC24.17c%2C 1220 aa%3B fasta scores: opt: 2418 z-score: 2421.7 E(): 0%3B 41.6%25 identity in 1257 aa overlap%2C to SW:SUBT_BACAM (EMBL:K02496) Bacillus amyloliquefaciens subtilisin BPM' precursor (EC 3.4.21.62) Apr%2C 382 aa%3B fasta scores: opt: 478 z-score: 483.8 E(): 1.8e-19%3B 41.4%25 identity in 290 aa overlap and to Streptomyces coelicolor possible  peptidase SC8A11.04c%2C 1253 aa%3B fasta scores: opt: 1835 z-score: 1440.0 E(): 0%3B 46.9%25 identity in 1279 aa overlap. Contains Pfam matches to entries PF00082 Peptidase_S8%2C Subtilase family and PF02225 PA%2C PA domain and matches to Prosite entries PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site%2C PS00137 Serine proteases%2C subtilase family%2C histidine active site and PS00138 Serine proteases%2C subtilase family%2C serine active site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A11.16c;product=peptidase;protein_id=NP_631246.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	7989927	7990172	.	-	.	ID=id9328;Dbxref=GeneID:1102626;Note=Pfam match to entry PF02225 PA%2C PA domain%2C score 15.10%2C E-value 0.13;gbkey=misc_feature;gene=SC8A11.16c
NC_003888.3	RefSeq	sequence_feature	7991049	7991909	.	-	.	ID=id9329;Dbxref=GeneID:1102626;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 202.30%2C E-value 7.4e-57;gbkey=misc_feature;gene=SC8A11.16c
NC_003888.3	RefSeq	sequence_feature	7991199	7991231	.	-	.	ID=id9330;Dbxref=GeneID:1102626;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site;gbkey=misc_feature;gene=SC8A11.16c
NC_003888.3	RefSeq	sequence_feature	7991712	7991744	.	-	.	ID=id9331;Dbxref=GeneID:1102626;Note=PS00137 Serine proteases%2C subtilase family%2C histidine active site;gbkey=misc_feature;gene=SC8A11.16c
NC_003888.3	RefSeq	sequence_feature	7991817	7991852	.	-	.	ID=id9332;Dbxref=GeneID:1102626;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site;gbkey=misc_feature;gene=SC8A11.16c
NC_003888.3	RefSeq	ribosome_entry_site	7992601	7992606	.	-	.	ID=id9333;gbkey=RBS
NC_003888.3	RefSeq	gene	7992891	7993154	.	-	.	ID=gene7252;Dbxref=GeneID:1102627;Name=SC8A11.17c;gbkey=Gene;gene=SC8A11.17c;gene_biotype=protein_coding;gene_synonym=SC8A11.17c;locus_tag=SCO7189
NC_003888.3	RefSeq	CDS	7992891	7993154	.	-	0	ID=cds7120;Parent=gene7252;Dbxref=Genbank:NP_631247.1,GeneID:1102627;Name=NP_631247.1;Note=SC8A11.17c%2C hypothetical protein%2C len: 87 aa%3B similar to SW:Y898_MYCTU (EMBL:Z73101) Mycobacterium tuberculosis hypothetical 9.9 kDa protein MTCY31.26c%2C 87 aa%3B fasta scores: opt: 256 z-score: 337.1 E(): 2.6e-11%3B 48.2%25 identity in 85 aa overlap. Highly hydrophilic;gbkey=CDS;gene=SC8A11.17c;product=hypothetical protein;protein_id=NP_631247.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7993159	7993162	.	-	.	ID=id9334;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	7993462	7993465	.	+	.	ID=id9335;gbkey=RBS
NC_003888.3	RefSeq	gene	7993470	7994357	.	+	.	ID=gene7253;Dbxref=GeneID:1102628;Name=SC8A11.18;gbkey=Gene;gene=SC8A11.18;gene_biotype=protein_coding;gene_synonym=SC8A11.18;locus_tag=SCO7190
NC_003888.3	RefSeq	CDS	7993470	7994357	.	+	0	ID=cds7121;Parent=gene7253;Dbxref=Genbank:NP_631248.1,GeneID:1102628;Name=NP_631248.1;Note=SC8A11.18%2C hypothetical protein%2C len: 295 aa%3B similar to TR:AAF67510 (EMBL:AF170880) Streptomyces sphaeroides NovQ%2C 271 aa%3B fasta scores: opt: 177 z-score: 217.8 E(): 0.00012%3B 24.7%25 identity in 194 aa overlap;gbkey=CDS;gene=SC8A11.18;product=hypothetical protein;protein_id=NP_631248.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	7994380	7994425	.	+	.	ID=id9336;Note=possible stem loop. Score 53: 19/20 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	stem_loop	7994481	7994564	.	-	.	ID=id9337;Note=possible stem loop. Score 63: 25/28 (89%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	7994561	7995370	.	-	.	ID=gene7254;Dbxref=GeneID:1102629;Name=SC8A11.19c;gbkey=Gene;gene=SC8A11.19c;gene_biotype=protein_coding;gene_synonym=SC8A11.19c;locus_tag=SCO7191
NC_003888.3	RefSeq	CDS	7994561	7995370	.	-	0	ID=cds7122;Parent=gene7254;Dbxref=Genbank:NP_631249.1,GeneID:1102629;Name=NP_631249.1;Note=SC8A11.19c%2C possible hypothetical protein%2C len: 269 aa%3B similar to TR:Q9S1U9 (EMBL:AL109950) Streptomyces coelicolor hypothetical 25.2 kDa protein SCJ24.24c%2C 242 aa%3B fasta scores: opt: 745 z-score: 832.0 E(): 0%3B 48.8%25 identity in 244 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8A11.19c;product=hypothetical protein;protein_id=NP_631249.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7995623	7995626	.	+	.	ID=id9338;gbkey=RBS
NC_003888.3	RefSeq	gene	7995629	7996294	.	+	.	ID=gene7255;Dbxref=GeneID:1102630;Name=SC8A11.20;gbkey=Gene;gene=SC8A11.20;gene_biotype=protein_coding;gene_synonym=SC8A11.20;locus_tag=SCO7192
NC_003888.3	RefSeq	CDS	7995629	7996294	.	+	0	ID=cds7123;Parent=gene7255;Dbxref=Genbank:NP_631250.1,GeneID:1102630;Name=NP_631250.1;Note=SC8A11.20%2C possible sigma factor%2C len: 221 aa%3B similar to TR:Q9RDI5 (EMBL:AL136519) Streptomyces coelicolor sigma factor SCC57A.13c%2C 315 aa%3B fasta scores: opt: 381 z-score: 442.9 E(): 3.4e-17%3B 39.9%25 identity in 178 aa overlap;gbkey=CDS;gene=SC8A11.20;product=sigma factor;protein_id=NP_631250.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7996496	7996500	.	+	.	ID=id9339;gbkey=RBS
NC_003888.3	RefSeq	gene	7996511	7997461	.	+	.	ID=gene7256;Dbxref=GeneID:1102631;Name=SC8A11.21;gbkey=Gene;gene=SC8A11.21;gene_biotype=protein_coding;gene_synonym=SC8A11.21;locus_tag=SCO7193
NC_003888.3	RefSeq	CDS	7996511	7997461	.	+	0	ID=cds7124;Parent=gene7256;Dbxref=Genbank:NP_631251.1,GeneID:1102631;Name=NP_631251.1;Note=SC8A11.21%2C conserved hypothetical protein%2C len: 316 aa%3B similar to TR:O07180 (EMBL:Z96797) Mycobacterium tuberculosis hypothetical 36.0 kDa protein MTCY07H7A.10%2C 355 aa%3B fasta scores: opt: 1256 z-score: 1437.6 E(): 0l%3B 60.9%25 identity in 307 aa overlap;gbkey=CDS;gene=SC8A11.21;product=hypothetical protein;protein_id=NP_631251.1;transl_table=11
NC_003888.3	RefSeq	gene	7997836	7998651	.	+	.	ID=gene7257;Dbxref=GeneID:1102632;Name=SC8A11.22;gbkey=Gene;gene=SC8A11.22;gene_biotype=protein_coding;gene_synonym=SC8A11.22;locus_tag=SCO7194
NC_003888.3	RefSeq	CDS	7997836	7998651	.	+	0	ID=cds7125;Parent=gene7257;Dbxref=Genbank:NP_631252.1,GeneID:1102632;Name=NP_631252.1;Note=SC8A11.22%2C possible polysaccharide biosynthesis protein%2C len: 271 aa%3B similar to N-terminal region of SW:SPSK_BACSU (EMBL:X73124) Bacillus subtilis spore coat polysaccharide biosynthesis protein SpsK%2C 432 aa%3B fasta scores: opt: 278 z-score: 331.5 E(): 5.3e-11%3B 28.1%25 identity in 242 aa overlap;gbkey=CDS;gene=SC8A11.22;product=polysaccharide biosynthesis protein;protein_id=NP_631252.1;transl_table=11
NC_003888.3	RefSeq	gene	7999105	7999371	.	-	.	ID=gene7258;Dbxref=GeneID:1102633;Name=SC8A11.23c;gbkey=Gene;gene=SC8A11.23c;gene_biotype=protein_coding;gene_synonym=SC8A11.23c;locus_tag=SCO7195
NC_003888.3	RefSeq	CDS	7999105	7999371	.	-	0	ID=cds7126;Parent=gene7258;Dbxref=Genbank:NP_631253.1,GeneID:1102633;Name=NP_631253.1;Note=SC8A11.23c%2C unknown%2C len: 88 aa;gbkey=CDS;gene=SC8A11.23c;product=hypothetical protein;protein_id=NP_631253.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	7999380	7999383	.	-	.	ID=id9340;gbkey=RBS
NC_003888.3	RefSeq	gene	7999751	8000617	.	-	.	ID=gene7259;Dbxref=GeneID:1102634;Name=SC8A11.24c;gbkey=Gene;gene=SC8A11.24c;gene_biotype=protein_coding;gene_synonym=SC8A11.24c;locus_tag=SCO7196
NC_003888.3	RefSeq	CDS	7999751	8000617	.	-	0	ID=cds7127;Parent=gene7259;Dbxref=Genbank:NP_631254.1,GeneID:1102634;Name=NP_631254.1;Note=SC8A11.24c%2C possible ion transport integral membrane protein%2C len: 288 aa%3B similar to SW:KCSA_STRLI (EMBL:Z37969) Streptomyces lividans voltage-gated potassium channel KcsA%2C 160 aa%3B fasta scores: opt: 302 z-score: 373.1 E(): 2.6e-13%3B 41.0%25 identity in 156 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8A11.24c;product=ion transport integral membrane protein;protein_id=NP_631254.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	8000727	8000773	.	-	.	ID=id9341;Note=possible stem loop. Score 53: 19/20 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8000799	8002337	.	-	.	ID=gene7260;Dbxref=GeneID:1102635;Name=SC8A11.25c;gbkey=Gene;gene=SC8A11.25c;gene_biotype=protein_coding;gene_synonym=SC8A11.25c;locus_tag=SCO7197
NC_003888.3	RefSeq	CDS	8000799	8002337	.	-	0	ID=cds7128;Parent=gene7260;Dbxref=Genbank:NP_631255.1,GeneID:1102635;Name=NP_631255.1;Note=SC8A11.25c%2C probable amino acid transport integral membrane protein%2C len: 512 aa%3B similar to SW:ALST_BACSU (EMBL:Z73234) Bacillus subtilis amino acid carrier protein AlsT%2C 465 aa%3B fasta scores: opt: 560 z-score: 628.4 E(): 1.6e-27%3B 35.2%25 identity in 454 aa overlap. Contains Pfam match to entry PF01235 Na_Ala_symp%2C Sodium:alanine symporter family and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8A11.25c;product=amino acid ABC transporter permease;protein_id=NP_631255.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8000847	8002142	.	-	.	ID=id9342;Dbxref=GeneID:1102635;Note=Pfam match to entry PF01235 Na_Ala_symp%2C Sodium:alanine symporter family%2C score 342.50%2C E-value 4.7e-99;gbkey=misc_feature;gene=SC8A11.25c
NC_003888.3	RefSeq	ribosome_entry_site	8002345	8002349	.	-	.	ID=id9343;gbkey=RBS
NC_003888.3	RefSeq	gene	8002667	8003086	.	-	.	ID=gene7261;Dbxref=GeneID:1102636;Name=SC1D2.01c;gbkey=Gene;gene=SC1D2.01c;gene_biotype=protein_coding;gene_synonym=SC1D2.01c,SC8A11.26;locus_tag=SCO7198
NC_003888.3	RefSeq	CDS	8002667	8003086	.	-	0	ID=cds7129;Parent=gene7261;Dbxref=Genbank:NP_733726.1,GeneID:1102636;Name=NP_733726.1;Note=SC1D2.01c%2C possible regulatory protein%2C partial CDS%2C len: >106 aa. Similar to Streptomyces coelicolor TR:Q9XAJ6(EMBL:AL079348)  regulator%2C SC66T3.17 (360 aa)%2C fasta scores opt: 257 z-score: 345.4 E(): 9.2e-12 51.0%25 identity in 96 aa overlap.~SC8A11.26%2C possible regulatory protein (fragment)%2C len: >73 aa%3B similar to N-terminal region of TR:Q9XAJ6 (EMBL:AL079348) Streptomyces coelicolor regulator SC66T3.17%2C 360 aa%3B fasta scores: opt: 162 z-score: 232.5 E(): 1.8e-05%3B 55.4%25 identity in 56 aa overlap;gbkey=CDS;gene=SC1D2.01c;product=regulatory protein;protein_id=NP_733726.1;transl_table=11
NC_003888.3	RefSeq	gene	8003169	8003564	.	-	.	ID=gene7262;Dbxref=GeneID:1102637;Name=SC1D2.02c;gbkey=Gene;gene=SC1D2.02c;gene_biotype=protein_coding;gene_synonym=SC1D2.02c;locus_tag=SCO7199
NC_003888.3	RefSeq	CDS	8003169	8003564	.	-	0	ID=cds7130;Parent=gene7262;Dbxref=Genbank:NP_631256.1,GeneID:1102637;Name=NP_631256.1;Note=SC1D2.02c%2C possible membrane protein%2C len: 131 aa. Similar to Streptomyces coelicolor TR:Q9XAF9(EMBL:AL079356) hypothetical 19.3 kd protein%2C SC6G9.23 (187 aa)%2C fasta scores opt: 224 z-score: 255.7 E(): 9.1e-07 41.1%25 identity in 141 aa overlap. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC1D2.02c;product=hypothetical protein;protein_id=NP_631256.1;transl_table=11
NC_003888.3	RefSeq	gene	8003571	8004116	.	-	.	ID=gene7263;Dbxref=GeneID:1102638;Name=SC1D2.03c;gbkey=Gene;gene=SC1D2.03c;gene_biotype=protein_coding;gene_synonym=SC1D2.03c;locus_tag=SCO7200
NC_003888.3	RefSeq	CDS	8003571	8004116	.	-	0	ID=cds7131;Parent=gene7263;Dbxref=Genbank:NP_631257.1,GeneID:1102638;Name=NP_631257.1;Note=SC1D2.03c%2C unknown%2C len: 181 aa. Weakly similar to several proteins of unknown function e.g. Streptomyces coelicolor TR:CAB88434 (EMBL:AL353815) hypothetical 15.8 kd protein%2C SCD6.05C (139 aa)%2C fasta scores opt: 147 z-score: 192.6 E(): 0.003 34.2%25 identity in 120 aa overlap.;gbkey=CDS;gene=SC1D2.03c;product=hypothetical protein;protein_id=NP_631257.1;transl_table=11
NC_003888.3	RefSeq	gene	8004272	8004748	.	+	.	ID=gene7264;Dbxref=GeneID:1102639;Name=SC1D2.04;gbkey=Gene;gene=SC1D2.04;gene_biotype=protein_coding;gene_synonym=SC1D2.04;locus_tag=SCO7201
NC_003888.3	RefSeq	CDS	8004272	8004748	.	+	0	ID=cds7132;Parent=gene7264;Dbxref=Genbank:NP_631258.1,GeneID:1102639;Name=NP_631258.1;Note=SC1D2.04%2C possible transcriptional regulator%2C len: 158 aa. Similar to several e.g. Streptomyces coelicolor TR:Q9X8J3(EMBL:AL049841) transcriptional regulator%2C SCE9.21C (148 aa)%2C fasta scores opt: 200 z-score: 250.8 E(): 1.7e-06 32.1%25 identity in 134 aa overlap. Contains a Pfam match to entry PF01047 MarR%2C MarR family and has a helix-turn-helix motif situated between residues 50..71 (+2.73 SD).;gbkey=CDS;gene=SC1D2.04;product=transcriptional regulator;protein_id=NP_631258.1;transl_table=11
NC_003888.3	RefSeq	gene	8004831	8005571	.	+	.	ID=gene7265;Dbxref=GeneID:1102640;Name=SC1D2.05;gbkey=Gene;gene=SC1D2.05;gene_biotype=protein_coding;gene_synonym=SC1D2.05,SC2H12.01;locus_tag=SCO7202
NC_003888.3	RefSeq	CDS	8004831	8005571	.	+	0	ID=cds7133;Parent=gene7265;Dbxref=Genbank:NP_733727.1,GeneID:1102640;Name=NP_733727.1;Note=SC2H12.01%2C possible membrane protein%2C partial CDS%2C len: >87 aa. Contains a possible membrane spanning hydrophobic domain.~SC1D2.05%2C possible membrane protein%2C partial CDS%2C len >191 aa. Contains possible membrane spanning hydrophobic domains. Overlaps and extends into CDS SC2H12.01 on the adjoining cosmid.;gbkey=CDS;gene=SC1D2.05;product=hypothetical protein;protein_id=NP_733727.1;transl_table=11
NC_003888.3	RefSeq	gene	8005671	8006447	.	+	.	ID=gene7266;Dbxref=GeneID:1102641;Name=SC2H12.02;gbkey=Gene;gene=SC2H12.02;gene_biotype=protein_coding;gene_synonym=SC2H12.02;locus_tag=SCO7203
NC_003888.3	RefSeq	CDS	8005671	8006447	.	+	0	ID=cds7134;Parent=gene7266;Dbxref=Genbank:NP_631259.1,GeneID:1102641;Name=NP_631259.1;Note=SC2H12.02%2C possible integral membrane protein%2C len: 258 aa. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC2H12.02;product=hypothetical protein;protein_id=NP_631259.1;transl_table=11
NC_003888.3	RefSeq	gene	8007146	8007340	.	-	.	ID=gene7267;Dbxref=GeneID:1102642;Name=SC2H12.03c;gbkey=Gene;gene=SC2H12.03c;gene_biotype=protein_coding;gene_synonym=SC2H12.03c;locus_tag=SCO7204
NC_003888.3	RefSeq	CDS	8007146	8007340	.	-	0	ID=cds7135;Parent=gene7267;Dbxref=Genbank:NP_631260.1,GeneID:1102642;Name=NP_631260.1;Note=SC2H12.03c%2C unknown%2C len: 64 aa.;gbkey=CDS;gene=SC2H12.03c;product=hypothetical protein;protein_id=NP_631260.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8007485	8007488	.	+	.	ID=id9344;gbkey=RBS
NC_003888.3	RefSeq	gene	8007497	8008357	.	+	.	ID=gene7268;Dbxref=GeneID:1102643;Name=SC2H12.04;gbkey=Gene;gene=SC2H12.04;gene_biotype=protein_coding;gene_synonym=SC2H12.04;locus_tag=SCO7205
NC_003888.3	RefSeq	CDS	8007497	8008357	.	+	0	ID=cds7136;Parent=gene7268;Dbxref=Genbank:NP_631261.1,GeneID:1102643;Name=NP_631261.1;Note=SC2H12.04%2C possible hydrolase%2C len: 286 aa. Highly similar to many including: Moraxella sp. SW:DEH1_MORSP(EMBL:D90422) haloacetate dehalogenase H-1 (EC 3.8.1.3) (294 aa)%2C fasta scores opt: 556 z-score: 678.4 E(): 2.6e-30 35.6%25 identity in 292 aa overlap and Streptomyces coelicolor: TR:Q9RD12(EMBL:AL133422) hydrolase%2C SCM1.32 (298 aa)%2C fasta scores opt: 653 z-score: 795.7 E(): 0 42.2%25 identity in 287 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SC2H12.04;product=hydrolase;protein_id=NP_631261.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8007653	8008348	.	+	.	ID=id9345;Dbxref=GeneID:1102643;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 81.50%2C E-value 1.7e-20;gbkey=misc_feature;gene=SC2H12.04
NC_003888.3	RefSeq	gene	8008499	8009599	.	+	.	ID=gene7269;Dbxref=GeneID:1102644;Name=SC2H12.05;gbkey=Gene;gene=SC2H12.05;gene_biotype=protein_coding;gene_synonym=SC2H12.05;locus_tag=SCO7206
NC_003888.3	RefSeq	CDS	8008499	8009599	.	+	0	ID=cds7137;Parent=gene7269;Dbxref=Genbank:NP_631262.1,GeneID:1102644;Name=NP_631262.1;Note=SC2H12.05%2C possible membrane protein%2C len: 366 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC2H12.05;product=hypothetical protein;protein_id=NP_631262.1;transl_table=11
NC_003888.3	RefSeq	gene	8009646	8010506	.	+	.	ID=gene7270;Dbxref=GeneID:1102645;Name=SC2H12.06;gbkey=Gene;gene=SC2H12.06;gene_biotype=protein_coding;gene_synonym=SC2H12.06;locus_tag=SCO7207
NC_003888.3	RefSeq	CDS	8009646	8010506	.	+	0	ID=cds7138;Parent=gene7270;Dbxref=Genbank:NP_631263.1,GeneID:1102645;Name=NP_631263.1;Note=SC2H12.06%2C possible membrane protein%2C len: 286 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC2H12.06;product=hypothetical protein;protein_id=NP_631263.1;transl_table=11
NC_003888.3	RefSeq	gene	8010429	8010662	.	-	.	ID=gene7271;Dbxref=GeneID:1102646;Name=SC2H12.07c;gbkey=Gene;gene=SC2H12.07c;gene_biotype=protein_coding;gene_synonym=SC2H12.07c;locus_tag=SCO7208
NC_003888.3	RefSeq	CDS	8010429	8010662	.	-	0	ID=cds7139;Parent=gene7271;Dbxref=Genbank:NP_631264.1,GeneID:1102646;Name=NP_631264.1;Note=SC2H12.07c%2C unknown%2C len: 77 aa.;gbkey=CDS;gene=SC2H12.07c;product=hypothetical protein;protein_id=NP_631264.1;transl_table=11
NC_003888.3	RefSeq	gene	8010715	8010855	.	-	.	ID=gene7272;Dbxref=GeneID:1102647;Name=SC2H12.08c;gbkey=Gene;gene=SC2H12.08c;gene_biotype=protein_coding;gene_synonym=SC2H12.08c;locus_tag=SCO7209
NC_003888.3	RefSeq	CDS	8010715	8010855	.	-	0	ID=cds7140;Parent=gene7272;Dbxref=Genbank:NP_631265.1,GeneID:1102647;Name=NP_631265.1;Note=SC2H12.08c%2C doubtful CDS%2C len: 46 aa.;gbkey=CDS;gene=SC2H12.08c;product=hypothetical protein;protein_id=NP_631265.1;transl_table=11
NC_003888.3	RefSeq	gene	8010973	8011434	.	+	.	ID=gene7273;Dbxref=GeneID:1102648;Name=SC2H12.09;gbkey=Gene;gene=SC2H12.09;gene_biotype=protein_coding;gene_synonym=SC2H12.09;locus_tag=SCO7210
NC_003888.3	RefSeq	CDS	8010973	8011434	.	+	0	ID=cds7141;Parent=gene7273;Dbxref=Genbank:NP_631266.1,GeneID:1102648;Name=NP_631266.1;Note=SC2H12.09%2C hypothetical protein%2C len: 153 aa. Highly similar to Streptomyces lincolnensis SW:YMEL_STRLN(EMBL:X95703) hypothetical 17.2 kd protein (150 aa)%2C fasta scores opt: 628 z-score: 750.6 E(): 0 56.4%25 identity in 149 aa overlap;gbkey=CDS;gene=SC2H12.09;product=hypothetical protein;protein_id=NP_631266.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	8011568	8011613	.	-	.	ID=id9346;Note=possible stem loop with a 100%25 match over 21 bases with a loop of 4 bases.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8011635	8013374	.	-	.	ID=gene7274;Dbxref=GeneID:1102649;Name=SC2H12.10c;gbkey=Gene;gene=SC2H12.10c;gene_biotype=protein_coding;gene_synonym=SC2H12.10c;locus_tag=SCO7211
NC_003888.3	RefSeq	CDS	8011635	8013374	.	-	0	ID=cds7142;Parent=gene7274;Dbxref=Genbank:NP_631267.1,GeneID:1102649;Name=NP_631267.1;Note=SC2H12.10c%2C possible  glycosyl hydrolase%2C len: 579 aa. Similar in regions to many glycosyl hydrolases including: Arthrobacter sp. SW:E13B_ARTSP(EMBL:D23668) glucan endo-1%2C3-beta-glucosidase precursor (EC 3.2.1.39) (548 aa)%2C fasta scores opt: 449 z-score: 497.8 E(): 3e-20 27.8%25 identity in 533 aa overlap. Also similar to the C-terminus of Streptomyces coelicolor TR:O69947(EMBL:AL023862) hypothetical 133.5 kd protein%2C SC3F9.07 (1238 aa)%2C fasta scores opt: 1923 z-score: 2123.6 E(): 0 66.5%25 identity in 403 aa overlap. Note%2C the last 131 aa of this CDS are identical to those in the analogous position on the adjoining CDS%2C SC2H12.11c. Contains a possible N-terminal signal sequence. Contains a Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies.;gbkey=CDS;gene=SC2H12.10c;product=glycosyl hydrolase;protein_id=NP_631267.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8011636	8012030	.	-	.	ID=id9347;Dbxref=GeneID:1102649;Note=shares 98%25 identity with the duplicated sequence: complement(8088..8482).;gbkey=repeat_region;gene=SC2H12.10c
NC_003888.3	RefSeq	sequence_feature	8011638	8012030	.	-	.	ID=id9348;Dbxref=GeneID:1102649;Note=Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies.%2C score 90.60%2C E-value 3e-23;gbkey=misc_feature;gene=SC2H12.10c
NC_003888.3	RefSeq	ribosome_entry_site	8013383	8013387	.	-	.	ID=id9349;gbkey=RBS
NC_003888.3	RefSeq	gene	8013393	8016281	.	-	.	ID=gene7275;Dbxref=GeneID:1102650;Name=SC2H12.11c;gbkey=Gene;gene=SC2H12.11c;gene_biotype=protein_coding;gene_synonym=SC2H12.11c;locus_tag=SCO7212
NC_003888.3	RefSeq	CDS	8013393	8016281	.	-	0	ID=cds7143;Parent=gene7275;Dbxref=Genbank:NP_631268.1,GeneID:1102650;Name=NP_631268.1;Note=SC2H12.11c%2C possible  glycosyl hydrolase%2C len: 962 aa. Similar to many including: Arthrobacter sp. SW:E13B_ARTSP(EMBL:D23668) glucan endo-1%2C3-beta-glucosidase precursor (EC 3.2.1.39) (548 aa)%2C fasta scores opt: 455 z-score: 456.5 E(): 5.9e-18 29.8%25 identity in 544 aa overlap. Also similar to the N-terminus of Streptomyces coelicolor TR:O69947(EMBL:AL023862) hypothetical 133.5 kd protein%2C SC3F9.07 (1238 aa)%2C fasta scores opt: 3612 z-score: 3597.9 E(): 0 63.9%25 identity in 831 aa overlap. Note%2C the last 131 aa of this CDS are identical to those in the analogous position on the adjoining CDS%2C SC2H12.10c. Contains a possible N-terminal signal sequence. Contains a Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies. Contains a TTA leucine;gbkey=CDS;gene=SC2H12.11c;product=glycosyl hydrolase;protein_id=NP_631268.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8013394	8013788	.	-	.	ID=id9350;Dbxref=GeneID:1102650;Note=shares 98%25 identity with the duplicated sequence: complement(6330..6724).;gbkey=repeat_region;gene=SC2H12.11c
NC_003888.3	RefSeq	sequence_feature	8013396	8013788	.	-	.	ID=id9351;Dbxref=GeneID:1102650;Note=Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies.%2C score 90.60%2C E-value 3e-23;gbkey=misc_feature;gene=SC2H12.11c
NC_003888.3	RefSeq	stem_loop	8016113	8016157	.	-	.	ID=id9352;Dbxref=GeneID:1102650;Note=possible stem loop with 18/19 matches and a loop of 7 bases.;gbkey=stem_loop;gene=SC2H12.11c
NC_003888.3	RefSeq	sequence_feature	8016264	8016266	.	-	.	ID=id9353;Dbxref=GeneID:1102650;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC2H12.11c
NC_003888.3	RefSeq	ribosome_entry_site	8016288	8016291	.	-	.	ID=id9354;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8017028	8017031	.	+	.	ID=id9355;gbkey=RBS
NC_003888.3	RefSeq	gene	8017040	8017786	.	+	.	ID=gene7276;Dbxref=GeneID:1102651;Name=SC2H12.12;gbkey=Gene;gene=SC2H12.12;gene_biotype=protein_coding;gene_synonym=SC2H12.12;locus_tag=SCO7213
NC_003888.3	RefSeq	CDS	8017040	8017786	.	+	0	ID=cds7144;Parent=gene7276;Dbxref=Genbank:NP_631269.1,GeneID:1102651;Name=NP_631269.1;Note=SC2H12.12%2C unknown%2C len: 248 aa. Similar to Streptomyces coelicolor TR:CAB89463(EMBL:AL354048) fatty acid synthase%2C SCE25.32C (438 aa)%2C fasta scores opt: 195 z-score: 237.4 E(): 9.5e-06 26.3%25 identity in 232 aa overlap. Also highly similar to Escherichia coli SW:YJHP_ECOLI(EMBL:U14003) hypothetical 27.4 kd protein (248 aa)%2C fasta scores opt: 1174 z-score: 1413.2 E():0 66.5%25 identity in 248 aa overlap.;gbkey=CDS;gene=SC2H12.12;product=hypothetical protein;protein_id=NP_631269.1;transl_table=11
NC_003888.3	RefSeq	gene	8017954	8019021	.	-	.	ID=gene7277;Dbxref=GeneID:1102652;Name=SC2H12.13c;gbkey=Gene;gene=SC2H12.13c;gene_biotype=protein_coding;gene_synonym=SC2H12.13c;locus_tag=SCO7214
NC_003888.3	RefSeq	CDS	8017954	8019021	.	-	0	ID=cds7145;Parent=gene7277;Dbxref=Genbank:NP_631270.1,GeneID:1102652;Name=NP_631270.1;Note=SC2H12.13c%2C possible integral membrane protein%2C len: 355 aa. Similar to several proteins of unknown function e.g. Streptomyces coelicolor TR:Q9S290(EMBL:AL096849) membrane protein%2C SCI11.29 (354 aa)%2C fasta scores opt: 1082 z-score: 1169.9 E():0 47.4%25 identity in 350 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC2H12.13c;product=hypothetical protein;protein_id=NP_631270.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8019025	8019030	.	-	.	ID=id9356;gbkey=RBS
NC_003888.3	RefSeq	gene	8019248	8019808	.	-	.	ID=gene7278;Dbxref=GeneID:1102653;Name=SC2H12.14c;gbkey=Gene;gene=SC2H12.14c;gene_biotype=protein_coding;gene_synonym=SC2H12.14c;locus_tag=SCO7215
NC_003888.3	RefSeq	CDS	8019248	8019808	.	-	0	ID=cds7146;Parent=gene7278;Dbxref=Genbank:NP_631271.1,GeneID:1102653;Name=NP_631271.1;Note=SC2H12.14c%2C hypothetical protein%2C len: 186 aa. Similar to Deinococcus radiodurans TR:Q9RRF8(EMBL:AE002082) hypothetical protein%2C GrpB (188 aa)%2C fasta scores opt: 281 z-score: 356.9 E(): 2.1e-12 35.9%25 identity in 184 aa overlap and to SW:YI88_BACHD (EMBL:AP001513) Bacillus halodurans hypothetical protein BH1888%2C 195 aa%3B fasta scores: opt: 471 Z-score: 557.2 E(): 2.1e-23%3B 41.361%25 identity in 191 aa overlap;gbkey=CDS;gene=SC2H12.14c;product=hypothetical protein;protein_id=NP_631271.1;transl_table=11
NC_003888.3	RefSeq	gene	8020184	8021290	.	+	.	ID=gene7279;Dbxref=GeneID:1102654;Name=SC2H12.15;gbkey=Gene;gene=SC2H12.15;gene_biotype=protein_coding;gene_synonym=SC2H12.15;locus_tag=SCO7216
NC_003888.3	RefSeq	CDS	8020184	8021290	.	+	0	ID=cds7147;Parent=gene7279;Dbxref=Genbank:NP_631272.1,GeneID:1102654;Name=NP_631272.1;Note=SC2H12.15%2C possible FecCD-family membrane transport protein%2C len: 368 aa. Highly similar to many including: Yersinia pestis SW:HMUU_YERPE(EMBL:U60647) hemin transport system permease HmuU (334 aa)%2C fasta scores opt: 674 z-score: 713.5 E(): 2.9e-32 40.4%25 identity in 342 aa overlap and Streptomyces coelicolor TR:Q9RKQ5(EMBL:AL133220) FecCD-family membrane transport protein%2C SCC75A.19 (363 aa)%2C fasta scores opt: 777 z-score: 820.7 E():0 42.6%25 identity in 371 aa overlap. Contains possible membrane spanning hydrophobic domains%2C a possible N-terminal signal sequence and a Pfam match to entry PF01032 FecCD_family%2C FecCD transport family.;gbkey=CDS;gene=SC2H12.15;product=FecCD-family membrane transport protein;protein_id=NP_631272.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8020334	8021263	.	+	.	ID=id9357;Dbxref=GeneID:1102654;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 324.70%2C E-value 1.1e-93;gbkey=misc_feature;gene=SC2H12.15
NC_003888.3	RefSeq	ribosome_entry_site	8021279	8021283	.	+	.	ID=id9358;Dbxref=GeneID:1102654;gbkey=RBS;gene=SC2H12.15
NC_003888.3	RefSeq	gene	8021287	8022063	.	+	.	ID=gene7280;Dbxref=GeneID:1102655;Name=SC2H12.16;gbkey=Gene;gene=SC2H12.16;gene_biotype=protein_coding;gene_synonym=SC2H12.16;locus_tag=SCO7217
NC_003888.3	RefSeq	CDS	8021287	8022063	.	+	0	ID=cds7148;Parent=gene7280;Dbxref=Genbank:NP_631273.1,GeneID:1102655;Name=NP_631273.1;gbkey=CDS;gene=SC2H12.16;product=iron ABC transporter ATP-binding protein;protein_id=NP_631273.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8021371	8021922	.	+	.	ID=id9359;Dbxref=GeneID:1102655;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 187.50%2C E-value 2.1e-52;gbkey=misc_feature;gene=SC2H12.16
NC_003888.3	RefSeq	sequence_feature	8021392	8021415	.	+	.	ID=id9360;Dbxref=GeneID:1102655;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=SC2H12.16
NC_003888.3	RefSeq	sequence_feature	8021704	8021748	.	+	.	ID=id9361;Dbxref=GeneID:1102655;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=SC2H12.16
NC_003888.3	RefSeq	ribosome_entry_site	8022116	8022120	.	+	.	ID=id9362;gbkey=RBS
NC_003888.3	RefSeq	gene	8022130	8023167	.	+	.	ID=gene7281;Dbxref=GeneID:1102656;Name=SC2H12.17;gbkey=Gene;gene=SC2H12.17;gene_biotype=protein_coding;gene_synonym=SC2H12.17;locus_tag=SCO7218
NC_003888.3	RefSeq	CDS	8022130	8023167	.	+	0	ID=cds7149;Parent=gene7281;Dbxref=Genbank:NP_631274.1,GeneID:1102656;Name=NP_631274.1;Note=SC2H12.17%2C possible iron transport lipoprotein%2C len: 345 aa. Similar to Streptomyces coelicolor TR:Q9RK12(EMBL:AL109974)  iron-siderophore binding lipoprotein%2C SCF34.13C (350 aa)%2C fasta scores opt: 221 z-score: 254.1 E(): 1.1e-06 28.7%25 identity in 352 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains a Pfam match to entry PF01497 Peripla_BP_2%2C Periplasmic binding protein;gbkey=CDS;gene=SC2H12.17;product=iron transport lipoprotein;protein_id=NP_631274.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8022172	8022204	.	+	.	ID=id9363;Dbxref=GeneID:1102656;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC2H12.17
NC_003888.3	RefSeq	sequence_feature	8022319	8023092	.	+	.	ID=id9364;Dbxref=GeneID:1102656;Note=Pfam match to entry PF01497 Peripla_BP_2%2C Periplasmic binding protein%2C score 34.10%2C E-value 2e-06;gbkey=misc_feature;gene=SC2H12.17
NC_003888.3	RefSeq	gene	8023216	8023842	.	-	.	ID=gene7282;Dbxref=GeneID:1102657;Name=SC2H12.18c;gbkey=Gene;gene=SC2H12.18c;gene_biotype=protein_coding;gene_synonym=SC2H12.18c;locus_tag=SCO7219
NC_003888.3	RefSeq	CDS	8023216	8023842	.	-	0	ID=cds7150;Parent=gene7282;Dbxref=Genbank:NP_631275.1,GeneID:1102657;Name=NP_631275.1;Note=SC2H12.18c%2C possible phosphoglycerate mutase%2C len: 208 aa. Similar to Deinococcus radiodurans TR:Q9RUJ3(EMBL:AE001985) phosphoglycerate mutase (237 aa)%2C fasta scores opt: 143 z-score: 182.9 E(): 0.01 31.5%25 identity in 222 aa overlap. Contains 2xPfam matches to entry PF00300 PGAM%2C Phosphoglycerate mutase family.;gbkey=CDS;gene=SC2H12.18c;product=phosphoglycerate mutase;protein_id=NP_631275.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8023645	8023779	.	-	.	ID=id9365;Dbxref=GeneID:1102657;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 23.70%2C E-value 2.1e-05;gbkey=misc_feature;gene=SC2H12.18c
NC_003888.3	RefSeq	sequence_feature	8023795	8023815	.	-	.	ID=id9366;Dbxref=GeneID:1102657;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 0.40%2C E-value 59;gbkey=misc_feature;gene=SC2H12.18c
NC_003888.3	RefSeq	ribosome_entry_site	8023849	8023853	.	-	.	ID=id9367;gbkey=RBS
NC_003888.3	RefSeq	gene	8023944	8025947	.	-	.	ID=gene7283;Dbxref=GeneID:1102658;Name=SC2H12.19c;gbkey=Gene;gene=SC2H12.19c;gene_biotype=protein_coding;gene_synonym=SC2H12.19c;locus_tag=SCO7220
NC_003888.3	RefSeq	CDS	8023944	8025947	.	-	0	ID=cds7151;Parent=gene7283;Dbxref=Genbank:NP_631276.1,GeneID:1102658;Name=NP_631276.1;Note=SC2H12.19c%2C unknown%2C len: 667 aa. Similar to many proteins of undefined function from Streptomyces coelicolor e.g. TR:Q9RJC6(EMBL:AL133171) SCF81.26 (835 aa)%2C opt: 1057 z-score: 1135.5 E():0 38.6%25 identity in 643 aa overlap.;gbkey=CDS;gene=SC2H12.19c;product=hypothetical protein;protein_id=NP_631276.1;transl_table=11
NC_003888.3	RefSeq	gene	8026306	8027475	.	-	.	ID=gene7284;Dbxref=GeneID:1102659;Name=SC2H12.20c;gbkey=Gene;gene=SC2H12.20c;gene_biotype=protein_coding;gene_synonym=SC2H12.20c;locus_tag=SCO7221
NC_003888.3	RefSeq	CDS	8026306	8027475	.	-	0	ID=cds7152;Parent=gene7284;Dbxref=Genbank:NP_631277.1,GeneID:1102659;Name=NP_631277.1;Note=SC2H12.20c%2C possible polyketide synthase%2C len: 389 aa. Weakly similar to several proteins from Eukaryotes and Prokaryotes involved in secondary metabolism e.g. Hydrangea macrophylla SW:CHSY_HYDMC(EMBL:AB011467) chalcone synthase (EC 2.3.1.74) a secondary plant metabolite (389 aa)%2C fasta scores opt: 294 z-score: 333.6 E(): 4.1e-11 28.4%25 identity in 282 aa overlap and Pseudomonas fluorescens TR:Q51725(EMBL:U41818) polyketide synthase PhlD (349 aa)%2C fasta scores opt: 433 z-score: 489.6 E(): 8.5e-20 26.4%25 identity in 386 aa overlap. Contains a Pfam match to entry PF00195 Chal_stil_synt%2C Chalcone and stilbene synthases.;gbkey=CDS;gene=SC2H12.20c;product=polyketide synthase;protein_id=NP_631277.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8026498	8027175	.	-	.	ID=id9368;Dbxref=GeneID:1102659;Note=Pfam match to entry PF00195 Chal_stil_synt%2C Chalcone and stilbene synthases%2C score 60.10%2C E-value 7.3e-17;gbkey=misc_feature;gene=SC2H12.20c
NC_003888.3	RefSeq	gene	8027802	8028512	.	-	.	ID=gene7285;Dbxref=GeneID:1102660;Name=SC2H12.21c;gbkey=Gene;gene=SC2H12.21c;gene_biotype=protein_coding;gene_synonym=SC2H12.21c;locus_tag=SCO7222
NC_003888.3	RefSeq	CDS	8027802	8028512	.	-	0	ID=cds7153;Parent=gene7285;Dbxref=Genbank:NP_631278.1,GeneID:1102660;Name=NP_631278.1;Note=SC2H12.21c%2C possible TetR-family transcriptional regulator%2C len: 236 aa. Similar to several including: Escherichia coli SW:TER1_ECOLI (EMBL:X61367) tetracycline repressor protein class A (216 aa)%2C fasta scores opt: 183 z-score: 217.2 E(): 0.00013 28.2%25 identity in 209 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 36..57 (+4.19 SD).;gbkey=CDS;gene=SC2H12.21c;product=TetR family transcriptional regulator;protein_id=NP_631278.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8028315	8028455	.	-	.	ID=id9369;Dbxref=GeneID:1102660;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 44.40%2C E-value 7.3e-10;gbkey=misc_feature;gene=SC2H12.21c
NC_003888.3	RefSeq	ribosome_entry_site	8028646	8028650	.	+	.	ID=id9370;gbkey=RBS
NC_003888.3	RefSeq	gene	8028659	8029780	.	+	.	ID=gene7286;Dbxref=GeneID:1102661;Name=SC2H12.22;gbkey=Gene;gene=SC2H12.22;gene_biotype=protein_coding;gene_synonym=SC2H12.22;locus_tag=SCO7223
NC_003888.3	RefSeq	CDS	8028659	8029780	.	+	0	ID=cds7154;Parent=gene7286;Dbxref=Genbank:NP_631279.1,GeneID:1102661;Name=NP_631279.1;Note=SC2H12.22%2C possible monooxygenase%2C len: 373 aa. Similar to many other monooxygenases e.g. Sphingomonas sp. TR:P96555(EMBL:AB000564) salicylate hydroxylase (395 aa)%2C fasta scores opt: 347 z-score: 390.9 E(): 2.7e-14 27.0%25 identity in 378 aa overlap and Streptomyces coelicolor TR:Q9RK22(EMBL:AL109974) monooxygenase%2C SCF34.03C (388 aa)%2C fasta scores opt: 998 z-score: 1113.7 E():0 47.2%25 identity in 343 aa overlap. Contains a Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase.;gbkey=CDS;gene=SC2H12.22;product=monooxygenase;protein_id=NP_631279.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8029097	8029708	.	+	.	ID=id9371;Dbxref=GeneID:1102661;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 74.70%2C E-value 2e-18;gbkey=misc_feature;gene=SC2H12.22
NC_003888.3	RefSeq	stem_loop	8029878	8029923	.	-	.	ID=id9372;Note=possible stem loop with 100%25 match over 19 bases with a loop region of 8 bases.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8029922	8030377	.	-	.	ID=gene7287;Dbxref=GeneID:1102662;Name=SC2H12.23c;gbkey=Gene;gene=SC2H12.23c;gene_biotype=protein_coding;gene_synonym=SC2H12.23c;locus_tag=SCO7224
NC_003888.3	RefSeq	CDS	8029922	8030377	.	-	0	ID=cds7155;Parent=gene7287;Dbxref=Genbank:NP_631280.1,GeneID:1102662;Name=NP_631280.1;Note=SC2H12.23c%2C possible integral membrane protein%2C len: 151 aa. Highly similar to several proteins of undefined function e.g. Haemophilus influenzae SW:Y886_HAEIN (EMBL:U32770) hypothetical protein (134 aa)%2C fasta scores opt: 232 z-score: 291.2 E(): 9.6e-09 35.6%25 identity in 135 aa overlap and Streptomyces coelicolor TR:CAB92826 (EMBL:AL356892) integral membrane protein%2C SCC8A.08 (153 aa)%2C fasta scores opt: 533 z-score: 650.1 E(): 9.8e-29 58.7%25 identity in 143 aa overlap. Contains possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SC2H12.23c;product=hypothetical protein;protein_id=NP_631280.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8030386	8030390	.	-	.	ID=id9373;gbkey=RBS
NC_003888.3	RefSeq	gene	8030688	8031422	.	+	.	ID=gene7288;Dbxref=GeneID:1102663;Name=SC2H12.24;gbkey=Gene;gene=SC2H12.24;gene_biotype=protein_coding;gene_synonym=SC2H12.24;locus_tag=SCO7225
NC_003888.3	RefSeq	CDS	8030688	8031422	.	+	0	ID=cds7156;Parent=gene7288;Dbxref=Genbank:NP_631281.1,GeneID:1102663;Name=NP_631281.1;Note=SC2H12.24%2C  chitinase%2C len: 244 aa. The N-terminal is highly similar to several chitin binding proteins e.g. Streptomyces reticuli TR:O87962(EMBL:Y14315) chitin binding protein (CHB2) (201 aa)%2C fasta scores opt: 181 z-score: 193.2 E(): 0.0027 38.4%25 identity in 203 aa overlap. The C-terminal is similar to many chitinases e.g. Streptomyces olivaceoviridis TR:CAB83055(EMBL:AJ276990) chitinase precursor (EC 3.2.1.14) (781 aa)%2C fasta scores opt: 322 z-score: 324.1 E(): 1.4e-10 36.5%25 identity in 167 aa overlap. Also highly similar to several Streptomyces coelicolor chitinases e.g. TR:Q9Z9M5(EMBL:AB017013) chitinase%2C ChiG (fragment) (172 aa)%2C fasta scores opt: 845 z-score: 846.9 E():0 67.4%25 identity in 172 aa overlap and TRO86614:(EMBL:AL031155) SC3A7.13 (252 aa)%2C fasta scores opt: 1060 z-score: 1056.1 E(): 0 75.8%25 identity in 252 aa overlap. Contains a G/D rich region between residues 171..187. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SC2H12.24;product=chitinase;protein_id=NP_631281.1;transl_table=11
NC_003888.3	RefSeq	gene	8031545	8031985	.	+	.	ID=gene7289;Dbxref=GeneID:1102664;Name=SC2H12.25;gbkey=Gene;gene=SC2H12.25;gene_biotype=protein_coding;gene_synonym=SC2H12.25;locus_tag=SCO7226
NC_003888.3	RefSeq	CDS	8031545	8031985	.	+	0	ID=cds7157;Parent=gene7289;Dbxref=Genbank:NP_631282.1,GeneID:1102664;Name=NP_631282.1;Note=SC2H12.25%2C possible integral membrane protein%2C len: 146 aa. Similar to several proteins of unproven function e.g. Streptomyces coelicolor TR:Q9X9Z5(EMBL:AL079332) integral membrane protein%2C SCI5.05C (143 aa)%2C fasta scores opt: 321 z-score: 398.2 E(): 1.1e-1437.4%25 identity in 139 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC2H12.25;product=hypothetical protein;protein_id=NP_631282.1;transl_table=11
NC_003888.3	RefSeq	gene	8031982	8033013	.	+	.	ID=gene7290;Dbxref=GeneID:1102665;Name=SC2H12.26;gbkey=Gene;gene=SC2H12.26;gene_biotype=protein_coding;gene_synonym=SC2H12.26;locus_tag=SCO7227
NC_003888.3	RefSeq	CDS	8031982	8033013	.	+	0	ID=cds7158;Parent=gene7290;Dbxref=Genbank:NP_631283.1,GeneID:1102665;Name=NP_631283.1;Note=SC2H12.26%2C possible hypothetical protein%2C len: 343 aa. Highly similar to many proteins of undefined function e.g. Escherichia coli SW:YBBK_ECOLI(EMBL:AE000155) (305 aa)%2C fasta scores opt: 705 z-score: 738.7 E():0 42.2%25 identity in 301 aa overlap and Streptomyces coelicolor TR:Q9X9Z6(EMBL:AL079332) SCI5.04C (319 aa)%2C fasta scores opt: 1209 z-score: 1258.9 E():0 61.9%25 identity in 281 aa overlap. Contains a possible N-terminal signal sequence. Also contains a Prosite hit to PS01270 Band 7 protein family signature and a Pfam match to entry PF01145 Band_7%2C SPFH domain / Band 7 family;gbkey=CDS;gene=SC2H12.26;product=hypothetical protein;protein_id=NP_631283.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8032021	8032587	.	+	.	ID=id9374;Dbxref=GeneID:1102665;Note=Pfam match to entry PF01145 Band_7%2C SPFH domain / Band 7 family%2C score 278.90%2C E-value 6.3e-80;gbkey=misc_feature;gene=SC2H12.26
NC_003888.3	RefSeq	sequence_feature	8032396	8032482	.	+	.	ID=id9375;Dbxref=GeneID:1102665;Note=PS01270 Band 7 protein family signature;gbkey=misc_feature;gene=SC2H12.26
NC_003888.3	RefSeq	gene	8033017	8034681	.	-	.	ID=gene7291;Dbxref=GeneID:1102666;Name=SC2H12.27c;gbkey=Gene;gene=SC2H12.27c;gene_biotype=protein_coding;gene_synonym=SC2H12.27c;locus_tag=SCO7228
NC_003888.3	RefSeq	CDS	8033017	8034681	.	-	0	ID=cds7159;Parent=gene7291;Dbxref=Genbank:NP_631284.1,GeneID:1102666;Name=NP_631284.1;Note=SC2H12.27c%2C possible polysaccharide lyase%2C len: 554 aa. Similar to regions within several pectate lyases e.g. Erwinia chrysanthemi SW:PELX_ERWCH(EMBL:M62739) exopolygalacturonate lyase precursor (EC 4.2.2.9)%2C PelX (749 aa)%2C fasta scores opt: 441 z-score: 462.5 E(): 2.7e-18 33.2%25 identity in 455 aa overlap.;gbkey=CDS;gene=SC2H12.27c;product=polysaccharide lyase;protein_id=NP_631284.1;transl_table=11
NC_003888.3	RefSeq	gene	8034753	8035697	.	-	.	ID=gene7292;Dbxref=GeneID:1102667;Name=SC2H12.28c;gbkey=Gene;gene=SC2H12.28c;gene_biotype=protein_coding;gene_synonym=SC2H12.28c;locus_tag=SCO7229
NC_003888.3	RefSeq	CDS	8034753	8035697	.	-	0	ID=cds7160;Parent=gene7292;Dbxref=Genbank:NP_631285.1,GeneID:1102667;Name=NP_631285.1;Note=SC2H12.28c%2C possible membrane protein%2C len: 314 aa. Similar to Streptomyces coelicolor TR:Q9XAG2(EMBL:AL079356) possible membrane protein%2C SC6G9.20 (303 aa)%2C fasta scores opt: 826 z-score: 786.1 E():0 47.1%25 identity in 308 aa overlap and Mycobacterium tuberculosis TR:O05859(EMBL:Z95120) hypothetical 31.0 kd protein (285 aa)%2C fasta scores opt: 341 z-score: 332.4 E(): 4.9e-11 29.7%25 identity in 296 aa overlap. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC2H12.28c;product=hypothetical protein;protein_id=NP_631285.1;transl_table=11
NC_003888.3	RefSeq	gene	8035811	8036500	.	+	.	ID=gene7293;Dbxref=GeneID:1102668;Name=SC2H12.29;gbkey=Gene;gene=SC2H12.29;gene_biotype=protein_coding;gene_synonym=SC2H12.29;locus_tag=SCO7230
NC_003888.3	RefSeq	CDS	8035811	8036500	.	+	0	ID=cds7161;Parent=gene7293;Dbxref=Genbank:NP_631286.1,GeneID:1102668;Name=NP_631286.1;Note=SC2H12.29%2C possible two-component system response regulator%2C len: 229 aa. Highly similar to many other two-component system regulators e.g. Mycobacterium bovis SW:RGX3_MYCBO (EMBL:Y13627) sensory transduction protein%2C RegX3 (227 aa)%2C fasta scores opt: 609 z-score: 727.0 E(): 0 44.7%25 identity in 226 aa overlap and Streptomyces coelicolor TR:CAB90891 (EMBL:AL355753) two-component system response regulator protein%2C SC8G12.09 (233 aa)%2C fasta scores opt: 953 z-score: 1131.9 E(): 0 63.4%25 identity in 235 aa overlap. Contains a Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and a Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal.;gbkey=CDS;gene=SC2H12.29;product=two-component system response regulator;protein_id=NP_631286.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8035814	8036146	.	+	.	ID=id9376;Dbxref=GeneID:1102668;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 147.90%2C E-value 1.7e-40;gbkey=misc_feature;gene=SC2H12.29
NC_003888.3	RefSeq	sequence_feature	8036261	8036479	.	+	.	ID=id9377;Dbxref=GeneID:1102668;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 103.70%2C E-value 1e-29;gbkey=misc_feature;gene=SC2H12.29
NC_003888.3	RefSeq	gene	8036497	8038008	.	+	.	ID=gene7294;Dbxref=GeneID:1102669;Name=SC2H12.30;gbkey=Gene;gene=SC2H12.30;gene_biotype=protein_coding;gene_synonym=SC2H12.30;locus_tag=SCO7231
NC_003888.3	RefSeq	CDS	8036497	8038008	.	+	0	ID=cds7162;Parent=gene7294;Dbxref=Genbank:NP_631287.1,GeneID:1102669;Name=NP_631287.1;Note=SC2H12.30%2C possible two-component system sensor kinase%2C len: 503 aa. Highly similar to many other sensor kinases e.g. Streptomyces coelicolor SW:AFQ2_STRCO (EMBL:D10654) sensor protein%2C AfsQ2%2C a  regulator of secondary metabolism (EC 2.7.3.-) (535 aa)%2C fasta scores opt: 1112 z-score: 1254.8 E():0 42.0%25 identity in 519 aa overlap. Contains Pfam matches to entries PF00672 DUF5%2C Domain found in bacterial signal proteins and PF00512 signal%2C Histidine kinase. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC2H12.30;product=two-component system sensor kinase;protein_id=NP_631287.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8037046	8037255	.	+	.	ID=id9378;Dbxref=GeneID:1102669;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 61.30%2C E-value 2.1e-14;gbkey=misc_feature;gene=SC2H12.30
NC_003888.3	RefSeq	sequence_feature	8037316	8037948	.	+	.	ID=id9379;Dbxref=GeneID:1102669;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 177.40%2C E-value 2.4e-49;gbkey=misc_feature;gene=SC2H12.30
NC_003888.3	RefSeq	gene	8038005	8038640	.	+	.	ID=gene7295;Dbxref=GeneID:1102670;Name=SC2H12.31;gbkey=Gene;gene=SC2H12.31;gene_biotype=protein_coding;gene_synonym=SC2H12.31;locus_tag=SCO7232
NC_003888.3	RefSeq	CDS	8038005	8038640	.	+	0	ID=cds7163;Parent=gene7295;Dbxref=Genbank:NP_631288.1,GeneID:1102670;Name=NP_631288.1;Note=SC2H12.31%2C possible hypothetical protein%2C len: 211 aa. Similar to Streptomyces coelicolor TR:CAB90893(EMBL:AL355753)  lipoprotein%2C SC8G12.11 (187 aa)%2C fasta scores opt: 176 z-score: 196.2 E(): 0.0019 32.8%25 identity in 189 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC2H12.31;product=hypothetical protein;protein_id=NP_631288.1;transl_table=11
NC_003888.3	RefSeq	gene	8038819	8041623	.	+	.	ID=gene7296;Dbxref=GeneID:1102671;Name=SC2H12.32;gbkey=Gene;gene=SC2H12.32;gene_biotype=protein_coding;gene_synonym=SC2H12.32;locus_tag=SCO7233
NC_003888.3	RefSeq	CDS	8038819	8041623	.	+	0	ID=cds7164;Parent=gene7296;Dbxref=Genbank:NP_631289.1,GeneID:1102671;Name=NP_631289.1;Note=SC2H12.32%2C possible hypothetical protein%2C len: 934 aa. Note the product of this CDS is rich in the amino acid proline. Contains a possible N-terminal signal sequence. Contains a TTA /leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SC2H12.32;product=hypothetical protein;protein_id=NP_631289.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8039119	8039121	.	+	.	ID=id9380;Dbxref=GeneID:1102671;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC2H12.32
NC_003888.3	RefSeq	gene	8041721	8043442	.	+	.	ID=gene7297;Dbxref=GeneID:1102672;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;gene_synonym=ctaD,SC2H12.33;locus_tag=SCO7234
NC_003888.3	RefSeq	CDS	8041721	8043442	.	+	0	ID=cds7165;Parent=gene7297;Dbxref=Genbank:NP_631290.1,GeneID:1102672;Name=NP_631290.1;Note=SC2H12.33%2C ctaD%2C cytochrome C oxidase polypeptide I (EC 1.9.3.1)%2C len: 573 aa. Highly similar to many e.g. Bacillus subtilis SW:COX1_BACSU(EMBL:X54140) cytochrome C oxidase polypeptide I (EC 1.9.3.1) CtaD (621 aa)%2C fasta scores opt: 1725 z-score: 1882.8 E():0 47.7%25 identity in 524 aa overlap and Streptomyces coelicolor TR:Q9X813(EMBL:AL049497)  cytochrome C oxidase subunit I (EC 1.9.3.1)%2C SC6G10.28C (578 aa)%2C fasta scores opt: 3002 z-score: 3275.1 E():0 75.6%25 identity in 541 aa overlap. Contains a Prosite hit to PS00077 Heme-copper oxidase catalytic subunit%2C copper B binding region signature and a Pfam match to entry PF00115 COX1%2C Cytochrome C and Quinol oxidase polypeptide I. Also contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=ctaD;product=cytochrome C oxidase polypeptide I;protein_id=NP_631290.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8041850	8043214	.	+	.	ID=id9381;Dbxref=GeneID:1102672;Note=Pfam match to entry PF00115 COX1%2C Cytochrome C and Quinol oxidase polypeptide I%2C score 738.20%2C E-value 3.5e-218;gbkey=misc_feature;gene=ctaD
NC_003888.3	RefSeq	sequence_feature	8042540	8042704	.	+	.	ID=id9382;Dbxref=GeneID:1102672;Note=PS00077 Heme-copper oxidase catalytic subunit%2C copper B binding region signature;gbkey=misc_feature;gene=ctaD
NC_003888.3	RefSeq	sequence_feature	8043059	8043214	.	+	.	ID=id9383;Dbxref=GeneID:1102672;Note=Pfam match to entry PF00115 COX1%2C Cytochrome C and Quinol oxidase polypeptide I%2C score 72.00%2C E-value 2.4e-19;gbkey=misc_feature;gene=ctaD
NC_003888.3	RefSeq	gene	8043439	8043849	.	+	.	ID=gene7298;Dbxref=GeneID:1102673;Name=SC2H12.34;gbkey=Gene;gene=SC2H12.34;gene_biotype=protein_coding;gene_synonym=SC2H12.34,SC7A12.02;locus_tag=SCO7235
NC_003888.3	RefSeq	CDS	8043439	8043849	.	+	0	ID=cds7166;Parent=gene7298;Dbxref=Genbank:NP_631291.1,GeneID:1102673;Name=NP_631291.1;Note=SC2H12.34%2C possible integral membrane protein%2C partial CDS%2C len: >86 aa. Highly similar to proteins of unknown function from: Mycobacterium tuberculosis SW:YL99_MYCTU(EMBL:Z70283) (139 aa)%2C fasta scores opt: 200 z-score: 283.7 E(): 2.5e-08 45.6%25 identity in 90 aa overlap and Streptomyces coelicolor TR:Q9X812(EMBL:AL049497) integral membrane protein%2C SC6G10.27C (132 aa)%2C fasta scores opt: 245 z-score: 344.5 E(): 1e-11 43.0%25 identity in 86 aa overlap. Contains possible membrane spanning hydrophobic domains. Overlaps and extends into CDS SC7A12.02 on the adjoining cosmid.~SC7A12.02%2C possible integral membrane protein%2C len: 136 aa. Highly similar to Streptomyces coelicolor TR:Q9X812(EMBL:AL049497) integral membrane protein%2C SC6G10.27C (132 aa)%2C fasta scores opt: 333 z-score: 421.2 E(): 5.4e-16 39.4%25 identity in 132 aa overlap and Mycobacterium tuberculosis TR:Y00A_MYCTU(EMBL:Z70283) hypothetical 14.9 kd protein (139 aa)%2C fasta scores opt: 284 z-score: 361.2 E(): 1.2e-12 43.4%25 identity in 129 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC2H12.34;product=hypothetical protein;protein_id=NP_631291.1;transl_table=11
NC_003888.3	RefSeq	gene	8043825	8045489	.	-	.	ID=gene7299;Dbxref=GeneID:1102674;Name=qcrB3;gbkey=Gene;gene=qcrB3;gene_biotype=protein_coding;gene_synonym=qcrB3;locus_tag=SCO7236
NC_003888.3	RefSeq	CDS	8043825	8045489	.	-	0	ID=cds7167;Parent=gene7299;Dbxref=Genbank:NP_631292.1,GeneID:1102674;Name=NP_631292.1;Note=SC7A12.03c%2C qcrB3%2C ubiquinol-cytochrome C reductase cytochrome subunit B%2C len: 554 aa. Highly similar to many including: Streptomyces lividans SW:QCRB_STRLI(EMBL:AF107888) ubiquinol-cytochrome C reductase cytochrome subunit B (549 aa)%2C fasta scores opt: 1808 z-score: 1914.0 E():0 51.9%25 identity in 528 aa overlap and Streptomyces coelicolor SW:QCRB_STRCO (EMBL:AL049497) ubiquinol-cytochrome C reductase cytochrome subunit B%2C QcrB OR SC6G10.21c (545 aa)%2C opt: 2016 z-score: 2133.7 E():0 55.0%25 identity in 522 aa overlap. Contains a Pfam match to entry PF00033 cytochrome_b_N%2C Cytochrome b(N-terminal)/b6/petB and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=qcrB3;product=ubiquinol-cytochrome C reductase cytochrome subunit B;protein_id=NP_631292.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8044767	8045435	.	-	.	ID=id9384;Dbxref=GeneID:1102674;Note=Pfam match to entry PF00033 cytochrome_b_N%2C Cytochrome b(N-terminal)/b6/petB%2C score 40.60%2C E-value 1.2e-08;gbkey=misc_feature;gene=qcrB3
NC_003888.3	RefSeq	gene	8045564	8045923	.	-	.	ID=gene7300;Dbxref=GeneID:1102675;Name=SC7A12.04c;gbkey=Gene;gene=SC7A12.04c;gene_biotype=protein_coding;gene_synonym=SC7A12.04c;locus_tag=SCO7237
NC_003888.3	RefSeq	CDS	8045564	8045923	.	-	0	ID=cds7168;Parent=gene7300;Dbxref=Genbank:NP_631293.1,GeneID:1102675;Name=NP_631293.1;Note=SC7A12.04c%2C possible hypothetical protein%2C len: 119 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC7A12.04c;product=hypothetical protein;protein_id=NP_631293.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8045765	8045769	.	-	.	ID=id9385;Dbxref=GeneID:1102675;gbkey=RBS;gene=SC7A12.04c
NC_003888.3	RefSeq	gene	8046083	8046460	.	+	.	ID=gene7301;Dbxref=GeneID:1102676;Name=SC7A12.05;gbkey=Gene;gene=SC7A12.05;gene_biotype=protein_coding;gene_synonym=SC7A12.05;locus_tag=SCO7238
NC_003888.3	RefSeq	CDS	8046083	8046460	.	+	0	ID=cds7169;Parent=gene7301;Dbxref=Genbank:NP_631294.1,GeneID:1102676;Name=NP_631294.1;Note=SC7A12.05%2C unknown%2C len: 125 aa. Similar to Streptomyces coelicolor TR:Q9X8F4(EMBL:AL049573) hypothetical 14.3 kd protein%2C SCE39.31C (136 aa)%2C fasta scores opt: 247 z-score: 310.9 E(): 7.6e-10 37.2%25 identity in 121 aa overlap.;gbkey=CDS;gene=SC7A12.05;product=hypothetical protein;protein_id=NP_631294.1;transl_table=11
NC_003888.3	RefSeq	gene	8046501	8047403	.	+	.	ID=gene7302;Dbxref=GeneID:1102677;Name=SC7A12.06;gbkey=Gene;gene=SC7A12.06;gene_biotype=protein_coding;gene_synonym=SC7A12.06;locus_tag=SCO7239
NC_003888.3	RefSeq	CDS	8046501	8047403	.	+	0	ID=cds7170;Parent=gene7302;Dbxref=Genbank:NP_631295.1,GeneID:1102677;Name=NP_631295.1;Note=SC7A12.06%2C unknown%2C len: 300 aa. Weakly similar to several proteins of undefined function e.g. Mycobacterium tuberculosis TR:P94979(EMBL:Z85982) hypothetical 39.9 kd protein (351 aa)%2C fasta scores opt: 271 z-score: 321.1 E(): 2.1e-10 26.2%25 identity in 309 aa overlap. Also similar to TR:Q9HV65 (EMBL:AE004887) Pseudomonas aeruginosa hypothetical protein PA4734%2C 293 aa%3B fasta scores: opt: 497 Z-score: 565.3 E(): 7.4e-24%3B 40.727%25 identity in 275 aa overlap;gbkey=CDS;gene=SC7A12.06;product=hypothetical protein;protein_id=NP_631295.1;transl_table=11
NC_003888.3	RefSeq	gene	8047425	8049662	.	+	.	ID=gene7303;Dbxref=GeneID:1102678;Name=SC7A12.07;gbkey=Gene;gene=SC7A12.07;gene_biotype=protein_coding;gene_synonym=SC7A12.07;locus_tag=SCO7240
NC_003888.3	RefSeq	CDS	8047425	8049662	.	+	0	ID=cds7171;Parent=gene7303;Dbxref=Genbank:NP_631296.1,GeneID:1102678;Name=NP_631296.1;Note=SC7A12.07%2C possible Ser/Thr protein kinase%2C len: 745 aa. Similar to many kinases including: Myxococcus xanthus SW:PKN2_MYXXA (EMBL:M94857) Ser/Thr protein kinase (EC 2.7.1.-) (830 aa)%2C fasta scores opt: 653 z-score: 572.5 E(): 2e-24 31.1%25 identity in 636 aa overlap and Streptomyces coelicolor TR:Q9XA57(EMBL:AL096822)  Ser/Thr protein kinase%2C SCGD3.21C (522 aa)%2C fasta scores opt: 700 z-score: 615.9 E(): 7.7e-27 37.1%25 identity in 407 aa overlap. Contains a Prosite hit to PS00107 Protein kinases ATP-binding region signature and a Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain. Note this CDS contains a degenerate repeat region between residues 376..735;gbkey=CDS;gene=SC7A12.07;product=Ser/Thr protein kinase;protein_id=NP_631296.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8047455	8048228	.	+	.	ID=id9386;Dbxref=GeneID:1102678;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 207.50%2C E-value 2e-58;gbkey=misc_feature;gene=SC7A12.07
NC_003888.3	RefSeq	sequence_feature	8047473	8047544	.	+	.	ID=id9387;Dbxref=GeneID:1102678;Note=PS00107 Protein kinases ATP-binding region signature;gbkey=misc_feature;gene=SC7A12.07
NC_003888.3	RefSeq	repeat_region	8048550	8049627	.	+	.	ID=id9388;Dbxref=GeneID:1102678;Note=region containing multiple degenerate repeats.;gbkey=repeat_region;gene=SC7A12.07
NC_003888.3	RefSeq	gene	8049672	8051294	.	+	.	ID=gene7304;Dbxref=GeneID:1102679;Name=SC7A12.08;gbkey=Gene;gene=SC7A12.08;gene_biotype=protein_coding;gene_synonym=SC7A12.08;locus_tag=SCO7241
NC_003888.3	RefSeq	CDS	8049672	8051294	.	+	0	ID=cds7172;Parent=gene7304;Dbxref=Genbank:NP_631297.1,GeneID:1102679;Name=NP_631297.1;Note=SC7A12.08%2C possible oxidoreductase%2C len: 540 aa. Similar to many including: Streptomyces griseus SW:CRTI_STRGR(EMBL:L37405) phytoene dehydrogenase (EC 1.3.-.-) (507 aa)%2C fasta scores opt: 175 z-score: 191.7 E(): 0.0033 27.0%25 identity in 529 aa overlap and Mycobacterium tuberculosis SW:Y897_MYCTU(EMBL:Z73101) hypothetical 56.2 kda protein (535 aa)%2C fasta scores opt: 1633 z-score: 1765.0 E():0 52.0%25 identity in 527 aa overlap. Contains a Pfam match to entry PF02032 Phytoene_dh%2C Phytoene dehydrogenase related enzyme.;gbkey=CDS;gene=SC7A12.08;product=oxidoreductase;protein_id=NP_631297.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8049759	8051282	.	+	.	ID=id9389;Dbxref=GeneID:1102679;Note=Pfam match to entry PF02032 Phytoene_dh%2C Phytoene dehydrogenase related enzyme%2C score -251.50%2C E-value 4.3e-05;gbkey=misc_feature;gene=SC7A12.08
NC_003888.3	RefSeq	gene	8051378	8051503	.	+	.	ID=gene7305;Dbxref=GeneID:1102680;Name=SC7A12.09;gbkey=Gene;gene=SC7A12.09;gene_biotype=protein_coding;gene_synonym=SC7A12.09;locus_tag=SCO7242
NC_003888.3	RefSeq	CDS	8051378	8051503	.	+	0	ID=cds7173;Parent=gene7305;Dbxref=Genbank:NP_631298.1,GeneID:1102680;Name=NP_631298.1;Note=SC7A12.09%2C doubtful CDS%2C len: 41 aa.;gbkey=CDS;gene=SC7A12.09;product=hypothetical protein;protein_id=NP_631298.1;transl_table=11
NC_003888.3	RefSeq	gene	8051543	8053336	.	-	.	ID=gene7306;Dbxref=GeneID:1102681;Name=SC7A12.10c;gbkey=Gene;gene=SC7A12.10c;gene_biotype=protein_coding;gene_synonym=SC7A12.10c;locus_tag=SCO7243
NC_003888.3	RefSeq	CDS	8051543	8053336	.	-	0	ID=cds7174;Parent=gene7306;Dbxref=Genbank:NP_631299.1,GeneID:1102681;Name=NP_631299.1;Note=SC7A12.10c%2C possible hypothetical protein%2C len: 597 aa. Similar to Streptomyces coelicolor TR:Q9RKP5(EMBL:AL133220) possible  esterase%2C SCC75A.29C (351 aa)%2C fasta scores opt: 955 z-score: 1080.4 E():0 53.5%25 identity in 357 aa overlap. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SC7A12.10c;product=hypothetical protein;protein_id=NP_631299.1;transl_table=11
NC_003888.3	RefSeq	gene	8053492	8055009	.	+	.	ID=gene7307;Dbxref=GeneID:1102682;Name=SC7A12.11;gbkey=Gene;gene=SC7A12.11;gene_biotype=protein_coding;gene_synonym=SC7A12.11;locus_tag=SCO7244
NC_003888.3	RefSeq	CDS	8053492	8055009	.	+	0	ID=cds7175;Parent=gene7307;Dbxref=Genbank:NP_631300.1,GeneID:1102682;Name=NP_631300.1;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;gene=SC7A12.11;product=acyl-CoA synthetase;protein_id=NP_631300.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8053609	8054796	.	+	.	ID=id9390;Dbxref=GeneID:1102682;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 142.70%2C E-value 6.4e-39;gbkey=misc_feature;gene=SC7A12.11
NC_003888.3	RefSeq	gene	8055078	8055983	.	+	.	ID=gene7308;Dbxref=GeneID:1102683;Name=SC7A12.12;gbkey=Gene;gene=SC7A12.12;gene_biotype=protein_coding;gene_synonym=SC7A12.12;locus_tag=SCO7245
NC_003888.3	RefSeq	CDS	8055078	8055983	.	+	0	ID=cds7176;Parent=gene7308;Dbxref=Genbank:NP_631301.1,GeneID:1102683;Name=NP_631301.1;Note=SC7A12.12%2C possible hydrolase%2C len: 301 aa. Similar to Lactobacillus helveticus SW:PIP_LACHE(EMBL:Z56283) proline iminopeptidase (EC 3.4.11.5) (294 aa)%2C fasta scores opt: 254 z-score: 284.0 E(): 2.4e-08 27.5%25 identity in 262 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SC7A12.12;product=hydrolase;protein_id=NP_631301.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8055216	8055905	.	+	.	ID=id9391;Dbxref=GeneID:1102683;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 79.30%2C E-value 7.7e-20;gbkey=misc_feature;gene=SC7A12.12
NC_003888.3	RefSeq	gene	8056020	8056262	.	+	.	ID=gene7309;Dbxref=GeneID:1102684;Name=SC7A12.13;gbkey=Gene;gene=SC7A12.13;gene_biotype=protein_coding;gene_synonym=SC7A12.13;locus_tag=SCO7246
NC_003888.3	RefSeq	CDS	8056020	8056262	.	+	0	ID=cds7177;Parent=gene7309;Dbxref=Genbank:NP_631302.1,GeneID:1102684;Name=NP_631302.1;Note=SC7A12.13%2C unknown%2C len: 80 aa. Highly similar to Streptomyces coelicolor TR:Q53896 (EMBL:X60316) pleiotropic antibiotic regulatory locus AbaA%2C OrfD (75 aa)%2C fasta scores opt: 195 z-score: 288.2 E(): 1.4e-08 45.8%25 identity in 72 aa overlap.;gbkey=CDS;gene=SC7A12.13;product=hypothetical protein;protein_id=NP_631302.1;transl_table=11
NC_003888.3	RefSeq	gene	8056347	8057249	.	+	.	ID=gene7310;Dbxref=GeneID:1102685;Name=SC7A12.14;gbkey=Gene;gene=SC7A12.14;gene_biotype=protein_coding;gene_synonym=SC7A12.14;locus_tag=SCO7247
NC_003888.3	RefSeq	CDS	8056347	8057249	.	+	0	ID=cds7178;Parent=gene7310;Dbxref=Genbank:NP_631303.1,GeneID:1102685;Name=NP_631303.1;Note=SC7A12.14%2C unknown%2C len: 300 aa. Similar to many proteins of undefined function including: Streptomyces coelicolor TR:Q9RIZ8 (EMBL:AL109962) conserved hypothetical protein%2C SCJ1.16C (294 aa)%2C fasta scores opt: 524 z-score: 574.4 E(): 1.6e-24 38.8%25 identity in 309 aa overlap and Mycobacterium tuberculosis TR:O06188 (EMBL:Z95387) hypothetical protein (272 aa)%2C fasta scores opt: 240 z-score: 268.6 E(): 1.7e-07 28.6%25 identity in 290 aa overlap. Contains a 2x Pfam matches to entries PF00582 Usp%2C Universal stress protein family;gbkey=CDS;gene=SC7A12.14;product=hypothetical protein;protein_id=NP_631303.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8056449	8056754	.	+	.	ID=id9392;Dbxref=GeneID:1102685;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 24.10%2C E-value 0.00038;gbkey=misc_feature;gene=SC7A12.14
NC_003888.3	RefSeq	sequence_feature	8056887	8057225	.	+	.	ID=id9393;Dbxref=GeneID:1102685;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 4.80%2C E-value 0.026;gbkey=misc_feature;gene=SC7A12.14
NC_003888.3	RefSeq	gene	8057268	8057888	.	+	.	ID=gene7311;Dbxref=GeneID:1102686;Name=SC7A12.15;gbkey=Gene;gene=SC7A12.15;gene_biotype=protein_coding;gene_synonym=SC7A12.15;locus_tag=SCO7248
NC_003888.3	RefSeq	CDS	8057268	8057888	.	+	0	ID=cds7179;Parent=gene7311;Dbxref=Genbank:NP_631304.1,GeneID:1102686;Name=NP_631304.1;Note=SC7A12.15%2C unknown%2C len: 206 aa. Weakly similar to several proteins of undefined function e.g. Streptomyces coelicolor TR:CAB72201(EMBL:AL138851) SCE59.14C (196 aa)%2C fasta scores opt: 209 z-score: 240.8 E(): 6.1e-06 33.7%25 identity in 193 aa overlap.;gbkey=CDS;gene=SC7A12.15;product=hypothetical protein;protein_id=NP_631304.1;transl_table=11
NC_003888.3	RefSeq	gene	8057947	8058444	.	+	.	ID=gene7312;Dbxref=GeneID:1102687;Name=SC7A12.16;gbkey=Gene;gene=SC7A12.16;gene_biotype=protein_coding;gene_synonym=SC7A12.16;locus_tag=SCO7249
NC_003888.3	RefSeq	CDS	8057947	8058444	.	+	0	ID=cds7180;Parent=gene7312;Dbxref=Genbank:NP_631305.1,GeneID:1102687;Name=NP_631305.1;Note=SC7A12.16%2C unknown%2C len: 165 aa.;gbkey=CDS;gene=SC7A12.16;product=hypothetical protein;protein_id=NP_631305.1;transl_table=11
NC_003888.3	RefSeq	gene	8058466	8060385	.	-	.	ID=gene7313;Dbxref=GeneID:1102688;Name=SC7A12.17c;gbkey=Gene;gene=SC7A12.17c;gene_biotype=protein_coding;gene_synonym=SC7A12.17c;locus_tag=SCO7250
NC_003888.3	RefSeq	CDS	8058466	8060385	.	-	0	ID=cds7181;Parent=gene7313;Dbxref=Genbank:NP_631306.1,GeneID:1102688;Name=NP_631306.1;Note=SC7A12.17c%2C unknown%2C len: 639 aa. Highly similar to another hypothetical protein: Streptomyces coelicolor TR:Q9S2M7(EMBL:AL109661) SC6E10.10 (943 aa)%2C fasta scores opt: 1245 z-score: 1258.0 E(): 0 42.5%25 identity in 664 aa overlap. Contains a Pfam match to entry PF01510 Amidase_2%2C N-acetylmuramoyl-L-alanine amidase.;gbkey=CDS;gene=SC7A12.17c;product=hypothetical protein;protein_id=NP_631306.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8059144	8059584	.	-	.	ID=id9394;Dbxref=GeneID:1102688;Note=Pfam match to entry PF01510 Amidase_2%2C N-acetylmuramoyl-L-alanine amidase%2C score 46.30%2C E-value 7e-10;gbkey=misc_feature;gene=SC7A12.17c
NC_003888.3	RefSeq	repeat_region	8060666	8060725	.	-	.	ID=id9395;Note=55 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8060696	8061733	.	-	.	ID=gene7314;Dbxref=GeneID:1102689;Name=SC5H1.41;gbkey=Gene;gene=SC5H1.41;gene_biotype=protein_coding;gene_synonym=SC5H1.41;locus_tag=SCO7251
NC_003888.3	RefSeq	CDS	8060696	8061733	.	-	0	ID=cds7182;Parent=gene7314;Dbxref=Genbank:NP_631307.1,GeneID:1102689;Name=NP_631307.1;Note=SC5H1.41%2C hypothetical protein%2C len: 345 aa%3B unknown function%2C similar to part of TR:Q9Z4Z7 (EMBL:AL035707) S.coelicolor  phosphotransferase SCE29.03 (300 aa)%2C fasta scores%3B opt: 433 z-score: 437.4 E(): 4.9e-17%2C 37.2%25 identity in 269 aa overlap. Contains TTA (leucine) codon%2C possible target for bldA regulation. There are imperfect inverted repeats at each end of the CDS;gbkey=CDS;gene=SC5H1.41;product=hypothetical protein;protein_id=NP_631307.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8061509	8061511	.	-	.	ID=id9396;Dbxref=GeneID:1102689;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SC5H1.41
NC_003888.3	RefSeq	repeat_region	8061774	8061833	.	-	.	ID=id9397;Note=55 bp imperfect inverted repeat;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8062135	8063643	.	+	.	ID=gene7315;Dbxref=GeneID:1102690;Name=SC5H1.40c;gbkey=Gene;gene=SC5H1.40c;gene_biotype=protein_coding;gene_synonym=SC5H1.40c;locus_tag=SCO7252
NC_003888.3	RefSeq	CDS	8062135	8063643	.	+	0	ID=cds7183;Parent=gene7315;Dbxref=Genbank:NP_631308.1,GeneID:1102690;Name=NP_631308.1;Note=SC5H1.40c%2C possible regulatory protein%2C len: 502 aa%3B similar to e.g. SW:SP15_STRGR (EMBL:M32687) Streptomyces griseus sporulation protein (529 aa)%2C fasta scores%3B opt: 394 z-score: 452.2 E(): 7.2e-18%2C 27.9%25 identity in 530 aa. Similar to SC7A1.26 (EMBL:AL034447) S.coelicolor possible transcriptional regulator (500 aa) (43.0%25 identity in 491 aa overlap);gbkey=CDS;gene=SC5H1.40c;product=regulatory protein;protein_id=NP_631308.1;transl_table=11
NC_003888.3	RefSeq	gene	8063663	8064979	.	-	.	ID=gene7316;Dbxref=GeneID:1102691;Name=SC5H1.39;gbkey=Gene;gene=SC5H1.39;gene_biotype=protein_coding;gene_synonym=SC5H1.39;locus_tag=SCO7253
NC_003888.3	RefSeq	CDS	8063663	8064979	.	-	0	ID=cds7184;Parent=gene7316;Dbxref=Genbank:NP_631309.1,GeneID:1102691;Name=NP_631309.1;Note=SC5H1.39%2C hypothetical protein%2C len: 438 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SC5H1.39;product=hypothetical protein;protein_id=NP_631309.1;transl_table=11
NC_003888.3	RefSeq	gene	8065252	8066280	.	-	.	ID=gene7317;Dbxref=GeneID:1102692;Name=SC5H1.38;gbkey=Gene;gene=SC5H1.38;gene_biotype=protein_coding;gene_synonym=SC5H1.38;locus_tag=SCO7254
NC_003888.3	RefSeq	CDS	8065252	8066280	.	-	0	ID=cds7185;Parent=gene7317;Dbxref=Genbank:NP_631310.1,GeneID:1102692;Name=NP_631310.1;Note=SC5H1.38%2C probable myo-inositol dehydrogenase%2C len: 342 aa%3B similar to many e.g. SW:MI2D_BACSU (EMBL:M76431)%2C idh%2C Bacillus subtilis myo-inositol 2-dehydrogenase (344 aa)%2C fasta scores%3B opt: 864 z-score: 958.5 E(): 0%2C 38.1%25 identity in 336 aa overlap. Also similar to SW:STRI_STRGR (EMBL:Y00459)%2C strI%2C Streptomyces griseus streptomycin biosynthesis myo-inositol oxidoreductase (348 aa) (32.7%25 identity in 343 aa overlap). Weakly similar to TR:O69945 (EMBL:AL023862) S.coelicolor possible oxidoreductase (430 aa) (29.8%25 identity in 228 aa overlap). Contains Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 153.50%2C E-value 3.6e-42;gbkey=CDS;gene=SC5H1.38;product=myo-inositol dehydrogenase;protein_id=NP_631310.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8065549	8066268	.	-	.	ID=id9398;Dbxref=GeneID:1102692;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 153.50%2C E-value 3.6e-42;gbkey=misc_feature;gene=SC5H1.38
NC_003888.3	RefSeq	ribosome_entry_site	8066291	8066295	.	-	.	ID=id9399;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8066404	8067498	.	-	.	ID=gene7318;Dbxref=GeneID:1102693;Name=SC5H1.37;gbkey=Gene;gene=SC5H1.37;gene_biotype=protein_coding;gene_synonym=SC5H1.37;locus_tag=SCO7255
NC_003888.3	RefSeq	CDS	8066404	8067498	.	-	0	ID=cds7186;Parent=gene7318;Dbxref=Genbank:NP_631311.1,GeneID:1102693;Name=NP_631311.1;Note=SC5H1.37%2C hypothetical protein%2C len: 364 aa%3B unknown function%2C similar to TR:P73120 (EMBL:D90903) Synechocystis sp. hypothetical protein (358 aa)%2C fasta scores%3B opt: 492 z-score: 559.6 E(): 7.6e-24%2C 31.6%25 identity in 364 aa overlap;gbkey=CDS;gene=SC5H1.37;product=hypothetical protein;protein_id=NP_631311.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8067513	8067516	.	-	.	ID=id9400;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8067580	8069211	.	-	.	ID=gene7319;Dbxref=GeneID:1102694;Name=SC5H1.36;gbkey=Gene;gene=SC5H1.36;gene_biotype=protein_coding;gene_synonym=SC5H1.36;locus_tag=SCO7256
NC_003888.3	RefSeq	CDS	8067580	8069211	.	-	0	ID=cds7187;Parent=gene7319;Dbxref=Genbank:NP_631312.1,GeneID:1102694;Name=NP_631312.1;Note=SC5H1.36%2C probable protease (hypothetical protein)%2C len: 543 aa%3B similar to many e.g. TR:Q54398 (EMBL:L42758)%2C SlpD%2C Streptomyces lividans protease%2C (539 aa)%2C fasta scores%3B opt: 697 z-score: 769.7 E(): 0%2C35.8%25 identity in 545 aa overlap. Similar to other S.coelicolor proteases e.g. SlpD%2C SCH5.02c (EMBL:AL03563) proteinase (539 aa) (35.8%25 identity in 545 aa overlap). Contains possible N-terminal signal sequence. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 55.00%2C E-value 1.6e-12;gbkey=CDS;gene=SC5H1.36;product=protease;protein_id=NP_631312.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8067910	8068809	.	-	.	ID=id9401;Dbxref=GeneID:1102694;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 55.00%2C E-value 1.6e-12;gbkey=misc_feature;gene=SC5H1.36
NC_003888.3	RefSeq	ribosome_entry_site	8069217	8069220	.	-	.	ID=id9402;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8069437	8069440	.	+	.	ID=id9403;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8069445	8070158	.	+	.	ID=gene7320;Dbxref=GeneID:1102695;Name=SC5H1.35c;gbkey=Gene;gene=SC5H1.35c;gene_biotype=protein_coding;gene_synonym=SC5H1.35c;locus_tag=SCO7257
NC_003888.3	RefSeq	CDS	8069445	8070158	.	+	0	ID=cds7188;Parent=gene7320;Dbxref=Genbank:NP_631313.1,GeneID:1102695;Name=NP_631313.1;Note=SC5H1.35c%2C possible hypothetical protein%2C len: 237 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis%2C amino acid composition and the presence of a possible RBS. Similar to TR:Q9AD93 (EMBL:AL590507) Streptomyces coelicolor  hypothetical protein SCI52.16c%2C 259 aa%3B fasta scores: opt: 566 Z-score: 492.9 E(): 8e-20%3B 46.154%25 identity in 260 aa overlap. Contains possible N-terminal peptide signal sequence;gbkey=CDS;gene=SC5H1.35c;product=hypothetical protein;protein_id=NP_631313.1;transl_table=11
NC_003888.3	RefSeq	gene	8070206	8070691	.	-	.	ID=gene7321;Dbxref=GeneID:1102696;Name=SC5H1.34;gbkey=Gene;gene=SC5H1.34;gene_biotype=protein_coding;gene_synonym=SC5H1.34;locus_tag=SCO7258
NC_003888.3	RefSeq	CDS	8070206	8070691	.	-	0	ID=cds7189;Parent=gene7321;Dbxref=Genbank:NP_631314.1,GeneID:1102696;Name=NP_631314.1;Note=SC5H1.34%2C conserved hypothetical protein%2C len: 161 aa%3B unknown function%2C similar to hypothetical proteins e.g. TR:O59834 (EMBL:AL023590) Schizosaccaromyces pombe hypothetical protein (162 aa)%2C fasta scores%3B opt: 224 z-score: 282.3 E(): 2.1e-08%2C 28.6%25 identity in 161 aa overlap and weakly similar to SW:FCA1_CANAL (EMBL:U55194)%2C fca1%2C Candida albicans cytosine deaminase (150 aa) (30.1%25 identity in 93 aa overlap);gbkey=CDS;gene=SC5H1.34;product=hypothetical protein;protein_id=NP_631314.1;transl_table=11
NC_003888.3	RefSeq	gene	8070834	8071793	.	+	.	ID=gene7322;Dbxref=GeneID:1102697;Name=SC5H1.33c;gbkey=Gene;gene=SC5H1.33c;gene_biotype=protein_coding;gene_synonym=SC5H1.33c;locus_tag=SCO7259
NC_003888.3	RefSeq	CDS	8070834	8071793	.	+	0	ID=cds7190;Parent=gene7322;Dbxref=Genbank:NP_631315.1,GeneID:1102697;Name=NP_631315.1;Note=SC5H1.33c%2C hypothetical protein%2C len: 319 aa%3B unknown function%2C similar to TR:O33938 (EMBL:Y11199) eryBIV%2C Saccharopolyspora erythraea deoxyhexose reductase involved in mycarose biosynthesis (322 aa)%2C fasta scores%3B opt: 174 z-score: 200.8 E(): 0.00073%2C 28.7%25 identity in 282 aa overlap;gbkey=CDS;gene=SC5H1.33c;product=hypothetical protein;protein_id=NP_631315.1;transl_table=11
NC_003888.3	RefSeq	gene	8071805	8072074	.	-	.	ID=gene7323;Dbxref=GeneID:1102698;Name=SC5H1.32;gbkey=Gene;gene=SC5H1.32;gene_biotype=protein_coding;gene_synonym=SC5H1.32;locus_tag=SCO7260
NC_003888.3	RefSeq	CDS	8071805	8072074	.	-	0	ID=cds7191;Parent=gene7323;Dbxref=Genbank:NP_631316.1,GeneID:1102698;Name=NP_631316.1;Note=SC5H1.32%2C possible membrane protein%2C len: 89 aa%3B unknown function%2C similar to e.g. SW:YEAQ_ECOLI (EMBL:AE000274)%2C yeaQ%2C Escherichia coli hypothetical protein (82 aa)%2C fasta scores%3B opt: 180 z-score: 242.2 E(): 3.6e-06%2C 35.2%25 identity in 71 aa overlap;gbkey=CDS;gene=SC5H1.32;product=hypothetical protein;protein_id=NP_631316.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8072082	8072086	.	-	.	ID=id9404;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8072211	8072654	.	-	.	ID=gene7324;Dbxref=GeneID:1102699;Name=SC5H1.31;gbkey=Gene;gene=SC5H1.31;gene_biotype=protein_coding;gene_synonym=SC5H1.31;locus_tag=SCO7261
NC_003888.3	RefSeq	CDS	8072211	8072654	.	-	0	ID=cds7192;Parent=gene7324;Dbxref=Genbank:NP_631317.1,GeneID:1102699;Name=NP_631317.1;Note=SC5H1.31%2C possible membrane protein%2C len: 147 aa%3B unknown function%2C similar to TR:O07432 (EMBL:Z97050) Mycobacterium tuberculosis hypothetical protein (143 aa)%2C fasta scores%3B opt: 326 z-score: 414.4 E(): 9.2e-16%2C 36.2%25 identity in 141 aa overlap;gbkey=CDS;gene=SC5H1.31;product=hypothetical protein;protein_id=NP_631317.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8072320	8074621	.	+	.	ID=id9405;Note=sequence corresponding to EMBL:AB017012 from 2300 to 1;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	8072662	8072666	.	-	.	ID=id9406;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8072945	8073109	.	+	.	ID=gene7325;Dbxref=GeneID:1102700;Name=SC5H1.30c;gbkey=Gene;gene=SC5H1.30c;gene_biotype=protein_coding;gene_synonym=SC5H1.30c;locus_tag=SCO7262
NC_003888.3	RefSeq	CDS	8072945	8073109	.	+	0	ID=cds7193;Parent=gene7325;Dbxref=Genbank:NP_631318.1,GeneID:1102700;Name=NP_631318.1;Note=SC5H1.30c%2C hypothetical protein%2C len: 54 aa%3B unknown function%2C possible short CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SC5H1.30c;product=hypothetical protein;protein_id=NP_631318.1;transl_table=11
NC_003888.3	RefSeq	gene	8073282	8074172	.	+	.	ID=gene7326;Dbxref=GeneID:1102701;Name=chiF;gbkey=Gene;gene=chiF;gene_biotype=protein_coding;gene_synonym=chiF,SC5H1.29c;locus_tag=SCO7263
NC_003888.3	RefSeq	CDS	8073282	8074172	.	+	0	ID=cds7194;Parent=gene7326;Dbxref=Genbank:NP_631319.1,GeneID:1102701;Name=NP_631319.1;Note=SC5H1.29c%2C chiF%2C chitinase%2C len: 296 aa%3B previously sequenced as chiF (EMBL:AB017012) and similar to many e.g. TR:O50152 (EMBL:AB009289)%2C chiC%2C Streptomyces griseus chitinase C (294 aa)%2C fasta scores%3B opt: 1308 z-score: 1506.5 E(): 0%2C 65.8%25 identity in 295 aa overlap. Contains possible N-terminal signal sequence. Contains Pfam match to entry PF00182 chitinase_1%2C Chitinases class I%2C score 247.20%2C E-value 2.2e-70;gbkey=CDS;gene=chiF;product=chitinase;protein_id=NP_631319.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8073561	8074169	.	+	.	ID=id9407;Dbxref=GeneID:1102701;Note=Pfam match to entry PF00182 chitinase_1%2C Chitinases class I%2C score 247.20%2C E-value 2.2e-70;gbkey=misc_feature;gene=chiF
NC_003888.3	RefSeq	gene	8074183	8075100	.	+	.	ID=gene7327;Dbxref=GeneID:1102702;Name=SC5H1.28c;gbkey=Gene;gene=SC5H1.28c;gene_biotype=protein_coding;gene_synonym=SC5H1.28c;locus_tag=SCO7264
NC_003888.3	RefSeq	CDS	8074183	8075100	.	+	0	ID=cds7195;Parent=gene7327;Dbxref=Genbank:NP_631320.1,GeneID:1102702;Name=NP_631320.1;Note=SC5H1.28c%2C probable oxidoreductase%2C len: 305 aa%3B similar to many e.g. SW:MORA_PSEPU (EMBL:Q02198)%2C morA%2C Pseudomonas putida morphine 6-dehydrogenase (295 aa)%2C fasta scores%3B opt: 235 z-score: 281.5 E(): 2.3e-08%2C 28.1%25 identity in 274 aa overlap;gbkey=CDS;gene=SC5H1.28c;product=oxidoreductase;protein_id=NP_631320.1;transl_table=11
NC_003888.3	RefSeq	gene	8075475	8076074	.	-	.	ID=gene7328;Dbxref=GeneID:1102703;Name=SC5H1.27;gbkey=Gene;gene=SC5H1.27;gene_biotype=protein_coding;gene_synonym=SC5H1.27;locus_tag=SCO7265
NC_003888.3	RefSeq	CDS	8075475	8076074	.	-	0	ID=cds7196;Parent=gene7328;Dbxref=Genbank:NP_631321.1,GeneID:1102703;Name=NP_631321.1;Note=SC5H1.27%2C hypothetical protein%2C len: 199 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SC5H1.27;product=hypothetical protein;protein_id=NP_631321.1;transl_table=11
NC_003888.3	RefSeq	gene	8076071	8076808	.	-	.	ID=gene7329;Dbxref=GeneID:1102704;Name=SC5H1.26;gbkey=Gene;gene=SC5H1.26;gene_biotype=protein_coding;gene_synonym=SC5H1.26;locus_tag=SCO7266
NC_003888.3	RefSeq	CDS	8076071	8076808	.	-	0	ID=cds7197;Parent=gene7329;Dbxref=Genbank:NP_631322.1,GeneID:1102704;Name=NP_631322.1;Note=SC5H1.26%2C probable 3-oxoacyl-[acyl-carrier protein] reductase%2C len: 245 aa%3B similar to many short-chain oxidoreductases e.g. SW:FABG_BACSU (EMBL:U59433)%2C FabG%2C Bacillus subtilis 3-oxoacyl-[acyl-carrier protein] reductase (246 aa)%2C fasta scores%3B opt: 521 z-score: 562.5 E(): 5.2e-24%2C 36.6%25 identity in 246 aa overlap and SW:DHG2_BACME (EMBL:D90044)%2C GdhII%2C Bacillus megaterium glucose 1-dehydrogenase II (261 aa) (35.3%25 identity in 249 aa overlap). Similar to SCE134.03c (EMBL:AL049661) possible short chain dehydrogenase (255 aa) (35.1%25 identity in 242 aa overlap). Contains Pfam matches to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 220.40%2C E-value 2.7e-62 and entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 44.40%2C E-value 2.6e-09;gbkey=CDS;gene=SC5H1.26;product=3-oxoacyl-ACP reductase;protein_id=NP_631322.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8076089	8076181	.	-	.	ID=id9408;Dbxref=GeneID:1102704;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 44.40%2C E-value 2.6e-09;gbkey=misc_feature;gene=SC5H1.26
NC_003888.3	RefSeq	sequence_feature	8076242	8076796	.	-	.	ID=id9409;Dbxref=GeneID:1102704;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 220.40%2C E-value 2.7e-62;gbkey=misc_feature;gene=SC5H1.26
NC_003888.3	RefSeq	gene	8077041	8077436	.	+	.	ID=gene7330;Dbxref=GeneID:1102705;Name=SC5H1.25c;gbkey=Gene;gene=SC5H1.25c;gene_biotype=protein_coding;gene_synonym=SC5H1.25c;locus_tag=SCO7267
NC_003888.3	RefSeq	CDS	8077041	8077436	.	+	0	ID=cds7198;Parent=gene7330;Dbxref=Genbank:NP_631323.1,GeneID:1102705;Name=NP_631323.1;Note=SC5H1.25c%2C conserved hypothetical protein%2C len: 131 aa%3B similar to e.g. SW:YFC3_SHEPU (EMBL:L04283) Shewanella putrefaciens hypothetical protein (118 aa)%2C fasta scores%3B opt: 372 z-score: 466.1 E(): 1.2e-18%2C 52.2%25 identity in 115 aa overlap. Weakly similar to some lyases e.g. SW:LGUL_SALTY (EMBL:U57364)%2C gloA%2C Salmonella typhimurium lactoylglutathione lyase (135 aa) (23.6%25 identity in 127 aa overlap). Also similar to TR:O86701 (EMBL:AL031515) S.coelicolor possible lyase (138 aa) (33.1%25 identity in 127 aa overlap);gbkey=CDS;gene=SC5H1.25c;product=hypothetical protein;protein_id=NP_631323.1;transl_table=11
NC_003888.3	RefSeq	gene	8077471	8078550	.	+	.	ID=gene7331;Dbxref=GeneID:1102706;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;gene_synonym=add,SC5H1.24c;locus_tag=SCO7268
NC_003888.3	RefSeq	CDS	8077471	8078550	.	+	0	ID=cds7199;Parent=gene7331;Dbxref=Genbank:NP_631324.1,GeneID:1102706;Name=NP_631324.1;Note=catalyzes the formation of inosine from adenosine;gbkey=CDS;gene=add;product=adenosine deaminase;protein_id=NP_631324.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8077666	8078517	.	+	.	ID=id9410;Dbxref=GeneID:1102706;Note=Pfam match to entry PF00962 A_deaminase%2C Adenosine/AMP deaminase%2C score 220.40%2C E-value 2.6e-62;gbkey=misc_feature;gene=add
NC_003888.3	RefSeq	gene	8078532	8079047	.	-	.	ID=gene7332;Dbxref=GeneID:1102707;Name=SC5H1.23;gbkey=Gene;gene=SC5H1.23;gene_biotype=protein_coding;gene_synonym=SC5H1.23;locus_tag=SCO7269
NC_003888.3	RefSeq	CDS	8078532	8079047	.	-	0	ID=cds7200;Parent=gene7332;Dbxref=Genbank:NP_631325.1,GeneID:1102707;Name=NP_631325.1;Note=SC5H1.23%2C hypothetical protein%2C len: 171 aa%3B unknown function%2C similar to TR:O53728 (EMBL:AL021932) Mycobacterium tuberculosis hypothetical protein (171 aa)%2C fasta scores%3B opt: 561 z-score: 716.6 E(): 1.4e-32%2C 49.7%25 identity in 165 aa overlap;gbkey=CDS;gene=SC5H1.23;product=hypothetical protein;protein_id=NP_631325.1;transl_table=11
NC_003888.3	RefSeq	gene	8079088	8079972	.	-	.	ID=gene7333;Dbxref=GeneID:1102708;Name=SC5H1.22;gbkey=Gene;gene=SC5H1.22;gene_biotype=protein_coding;gene_synonym=SC5H1.22;locus_tag=SCO7270
NC_003888.3	RefSeq	CDS	8079088	8079972	.	-	0	ID=cds7201;Parent=gene7333;Dbxref=Genbank:NP_631326.1,GeneID:1102708;Name=NP_631326.1;Note=SC5H1.22%2C probable transcriptional regulator%2C len: 294 aa%3B similar to many LysR family regulators e.g. SW:BUDR_KLETE (EMBL:Z48600)%2C budR%2C Klebsiella terrigena bud operon transcriptional regulator (290 aa)%2C fasta scores%3B opt: 392 z-score: 459.0 E(): 3.1e-18%2C 33.7%25 identity in 267 aa overlap. Similar to TR:O86805 (EMBL:AL031317) S.coelicolor probable transcriptional regulator (306 aa) (29.3%25 identity in 304 aa overlap). Contains probable helix-turn-helix motif at aa 17-38 (Score 1145%2C +3.09 SD). Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix proteins%2C lysR family%2C score 171.10%2C E-value 1.9e-47 and PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=CDS;gene=SC5H1.22;product=transcriptional regulator;protein_id=NP_631326.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8079538	8079966	.	-	.	ID=id9411;Dbxref=GeneID:1102708;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix proteins%2C lysR family%2C score 171.10%2C E-value 1.9e-47;gbkey=misc_feature;gene=SC5H1.22
NC_003888.3	RefSeq	sequence_feature	8079832	8079924	.	-	.	ID=id9412;Dbxref=GeneID:1102708;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC5H1.22
NC_003888.3	RefSeq	ribosome_entry_site	8080130	8080133	.	+	.	ID=id9413;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8080134	8081093	.	+	.	ID=gene7334;Dbxref=GeneID:1102709;Name=SC5H1.21c;gbkey=Gene;gene=SC5H1.21c;gene_biotype=protein_coding;gene_synonym=SC5H1.21c;locus_tag=SCO7271
NC_003888.3	RefSeq	CDS	8080134	8081093	.	+	0	ID=cds7202;Parent=gene7334;Dbxref=Genbank:NP_631327.1,GeneID:1102709;Name=NP_631327.1;Note=SC5H1.21c%2C probable ion channel subunit%2C len: 319 aa%3B similar to many eukaryotic potassium channel subunits e.g. TR:Q39151 (EMBL:L40948) Arabidopsis thaliana K+ channel protein (328 aa)%2C fasta scores%3B opt: 627 z-score: 726.8 E(): 0%2C 35.7%25 identity in 325 aa overlap. Weakly similar to SC5H1.06c%2C hypothetical protein (327 aa) (29.3%25 identity in 338 aa overlap);gbkey=CDS;gene=SC5H1.21c;product=ion channel subunit;protein_id=NP_631327.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	8081100	8081172	.	-	.	ID=id9414;Note=stem is 27/34 (79%25) matches%2C 0 gaps%3B loop is 5 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8081175	8081558	.	-	.	ID=gene7335;Dbxref=GeneID:1102710;Name=SC5H1.20;gbkey=Gene;gene=SC5H1.20;gene_biotype=protein_coding;gene_synonym=SC5H1.20;locus_tag=SCO7272
NC_003888.3	RefSeq	CDS	8081175	8081558	.	-	0	ID=cds7203;Parent=gene7335;Dbxref=Genbank:NP_631328.1,GeneID:1102710;Name=NP_631328.1;Note=SC5H1.20%2C possible isomerase%2C len: 127 aa%3B weakly similar to SW:SDIS_PSEPU (EMBL:L13127)%2C ksI%2C Pseudomonas putida steroid delta-isomerase (131 aa)%2C fasta scores%3B opt: 109 z-score: 150.4 E(): 0.47%2C 26.0%25 identity in 131 aa overlap;gbkey=CDS;gene=SC5H1.20;product=isomerase;protein_id=NP_631328.1;transl_table=11
NC_003888.3	RefSeq	gene	8081893	8082303	.	+	.	ID=gene7336;Dbxref=GeneID:1102711;Name=SC5H1.19c;gbkey=Gene;gene=SC5H1.19c;gene_biotype=protein_coding;gene_synonym=SC5H1.19c;locus_tag=SCO7273
NC_003888.3	RefSeq	CDS	8081893	8082303	.	+	0	ID=cds7204;Parent=gene7336;Dbxref=Genbank:NP_631329.1,GeneID:1102711;Name=NP_631329.1;Note=SC5H1.19c%2C hypothetical protein%2C len: 136 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains TTA (leucine) codon%2C possible target for bldA regulation;gbkey=CDS;gene=SC5H1.19c;product=hypothetical protein;protein_id=NP_631329.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8082067	8082069	.	+	.	ID=id9415;Dbxref=GeneID:1102711;Note=TTA (leucine) codon%2C possible target for bldA regulation;gbkey=misc_feature;gene=SC5H1.19c
NC_003888.3	RefSeq	gene	8082329	8083531	.	-	.	ID=gene7337;Dbxref=GeneID:1102712;Name=SC5H1.18;gbkey=Gene;gene=SC5H1.18;gene_biotype=protein_coding;gene_synonym=SC5H1.18;locus_tag=SCO7274
NC_003888.3	RefSeq	CDS	8082329	8083531	.	-	0	ID=cds7205;Parent=gene7337;Dbxref=Genbank:NP_631330.1,GeneID:1102712;Name=NP_631330.1;Note=SC5H1.18%2C possible membrane protein%2C len: 400 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains hydrophobic%2C probable membrane-spanning regions;gbkey=CDS;gene=SC5H1.18;product=hypothetical protein;protein_id=NP_631330.1;transl_table=11
NC_003888.3	RefSeq	gene	8083750	8084169	.	-	.	ID=gene7338;Dbxref=GeneID:1102713;Name=SC5H1.17;gbkey=Gene;gene=SC5H1.17;gene_biotype=protein_coding;gene_synonym=SC5H1.17;locus_tag=SCO7275
NC_003888.3	RefSeq	CDS	8083750	8084169	.	-	0	ID=cds7206;Parent=gene7338;Dbxref=Genbank:NP_631331.1,GeneID:1102713;Name=NP_631331.1;Note=SC5H1.17%2C hypothetical protein%2C len: 138 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Contains region similar to adjacent CDS SC5H1.16%2C hypothetical protein (194 aa) (34.6%25 identity in 107 aa overlap);gbkey=CDS;gene=SC5H1.17;product=hypothetical protein;protein_id=NP_631331.1;transl_table=11
NC_003888.3	RefSeq	gene	8084166	8084750	.	-	.	ID=gene7339;Dbxref=GeneID:1102714;Name=SC5H1.16;gbkey=Gene;gene=SC5H1.16;gene_biotype=protein_coding;gene_synonym=SC5H1.16;locus_tag=SCO7276
NC_003888.3	RefSeq	CDS	8084166	8084750	.	-	0	ID=cds7207;Parent=gene7339;Dbxref=Genbank:NP_631332.1,GeneID:1102714;Name=NP_631332.1;Note=SC5H1.16%2C hypothetical protein%2C len: 194 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition. Start codon position suggested by GC frame plot and possible RBS. Contains region similar to adjacent CDS%2C SC5H1.17%2C hypothetical protein (138 aa) (34.6%25 identity in 107 aa overlap);gbkey=CDS;gene=SC5H1.16;product=hypothetical protein;protein_id=NP_631332.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8084758	8084763	.	-	.	ID=id9416;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8084920	8085375	.	+	.	ID=gene7340;Dbxref=GeneID:1102715;Name=SC5H1.15c;gbkey=Gene;gene=SC5H1.15c;gene_biotype=protein_coding;gene_synonym=SC5H1.15c;locus_tag=SCO7277
NC_003888.3	RefSeq	CDS	8084920	8085375	.	+	0	ID=cds7208;Parent=gene7340;Dbxref=Genbank:NP_631333.1,GeneID:1102715;Name=NP_631333.1;Note=SC5H1.15c%2C possible regulator protein%2C len: 151 aa%3B similar to Streptomyces fradiae beta-lactamase regulator protein (EMBL:AB024056) (139 aa)%2C fasta scores%3B opt: 177 z-score: 241.8 E(): 3.8e-06%2C 35.2%25 identity in 122 aa overlap and TR:O54111 (EMBL:AL021529)%2C SC10A5.20%2C S.coelicolor hypothetical protein (171 aa) (35.4%25 identity in 99 aa overlap);gbkey=CDS;gene=SC5H1.15c;product=regulator protein;protein_id=NP_631333.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	8085346	8085391	.	-	.	ID=id9417;Note=stem is 18/19 (94%25) matches%2C 0 gaps%3B loop is 8 bp;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8085400	8086287	.	-	.	ID=gene7341;Dbxref=GeneID:1102716;Name=SC5H1.14;gbkey=Gene;gene=SC5H1.14;gene_biotype=protein_coding;gene_synonym=SC5H1.14;locus_tag=SCO7278
NC_003888.3	RefSeq	CDS	8085400	8086287	.	-	0	ID=cds7209;Parent=gene7341;Dbxref=Genbank:NP_631334.1,GeneID:1102716;Name=NP_631334.1;Note=SC5H1.14%2C probable RNA polymerase sigma factor%2C len: 295 aa%3B similar to many e.g. SW:RPOF_STRCO (EMBL:L11648)%2C SigF%2C RpoX%2C Streptomyces coelicolor RNA polymerase sigma-F factor (287 aa)%2C fasta scores%3B opt: 707 z-score: 817.4 E(): 0%2C 43.6%25 identity in 282 aa overlap. Contains probable helix-turn-helix motif at aa 258-279 (Score 2096%2C +6.33 SD). Contains Pfam match to entry PF00140 sigma70%2C Sigma-70 factors%2C score 230.40%2C E-value 2.6e-65 and PS00715 Sigma-70 factors family signature 1;gbkey=CDS;gene=SC5H1.14;product=RNA polymerase sigma factor;protein_id=NP_631334.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8085430	8086104	.	-	.	ID=id9418;Dbxref=GeneID:1102716;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factors%2C score 230.40%2C E-value 2.6e-65;gbkey=misc_feature;gene=SC5H1.14
NC_003888.3	RefSeq	sequence_feature	8085973	8086014	.	-	.	ID=id9419;Dbxref=GeneID:1102716;Note=PS00715 Sigma-70 factors family signature 1;gbkey=misc_feature;gene=SC5H1.14
NC_003888.3	RefSeq	ribosome_entry_site	8086490	8086495	.	+	.	ID=id9420;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8086495	8086968	.	+	.	ID=gene7342;Dbxref=GeneID:1102717;Name=SC5H1.13c;gbkey=Gene;gene=SC5H1.13c;gene_biotype=protein_coding;gene_synonym=SC5H1.13c;locus_tag=SCO7279
NC_003888.3	RefSeq	CDS	8086495	8086968	.	+	0	ID=cds7210;Parent=gene7342;Dbxref=Genbank:NP_631335.1,GeneID:1102717;Name=NP_631335.1;Note=SC5H1.13c%2C possible DNA-binding protein%2C len: 157 aa%3B contains region similar to TR:O33287 (EMBL:AL008967) Mycobacterium tuberculosis possible transcriptional regulator (112 aa)%2C fasta scores%3B opt: 254 z-score: 260.9 E(): 3.3e-07%2C 50.0%25 identity in 94 aa overlap and TR:O86815 (EMBL:AL031031)%2C SC7C7.10%2C S.coelicolor hypothetical protein (126 aa) (55.6%25 identity in 72 aa overlap). Possible DNA-binding function as it contains probable helix-turn-helix motif at aa 77-98 (Score 1354%2C +3.80 SD) and Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 41.30%2C E-value 2.2e-08. PQATR repeat present in proline-rich N-terminus;gbkey=CDS;gene=SC5H1.13c;product=DNA-binding protein;protein_id=NP_631335.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8086693	8086857	.	+	.	ID=id9421;Dbxref=GeneID:1102717;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 41.30%2C E-value 2.2e-08;gbkey=misc_feature;gene=SC5H1.13c
NC_003888.3	RefSeq	gene	8087020	8087622	.	-	.	ID=gene7343;Dbxref=GeneID:1102718;Name=clpP4;gbkey=Gene;gene=clpP4;gene_biotype=protein_coding;gene_synonym=clpP4,SC5H1.12;locus_tag=SCO7280
NC_003888.3	RefSeq	CDS	8087020	8087622	.	-	0	ID=cds7211;Parent=gene7343;Dbxref=Genbank:NP_631336.1,GeneID:1102718;Name=NP_631336.1;Note=SC5H1.12%2C clpP4%2C probable ATP-dependent Clp protease proteolytic subunit 2%2C len: 200 aa%3B similar to many e.g. clpP2 (EMBL:AF071885) Streptomyces coelicolor ATP-dependent Clp protease proteolytic subunit 2 (236 aa)%2C fasta scores%3B opt: 716 z-score: 853.7 E(): 0%2C 56.0%25 identity in 193 aa overlap. Also similar to adjacent CDS%2C SC5H1.11%2C probable ATP-dependent Clp protease proteolytic subunit 1 (217 aa) (39.3%25 identity in 201 aa overlap). Contains Pfam match to entry PF00574 CLP_protease%2C Clp protease%2C score 268.60%2C E-value 8.1e-77;gbkey=CDS;gene=clpP4;product=ATP-dependent Clp protease proteolytic subunit 2;protein_id=NP_631336.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8087038	8087610	.	-	.	ID=id9422;Dbxref=GeneID:1102718;Note=Pfam match to entry PF00574 CLP_protease%2C Clp protease%2C score 268.60%2C E-value 8.1e-77;gbkey=misc_feature;gene=clpP4
NC_003888.3	RefSeq	gene	8087624	8088277	.	-	.	ID=gene7344;Dbxref=GeneID:1102719;Name=clpP3;gbkey=Gene;gene=clpP3;gene_biotype=protein_coding;gene_synonym=clpP3,SC5H1.11;locus_tag=SCO7281
NC_003888.3	RefSeq	CDS	8087624	8088277	.	-	0	ID=cds7212;Parent=gene7344;Dbxref=Genbank:NP_631337.1,GeneID:1102719;Name=NP_631337.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;gene=clpP3;product=ATP-dependent Clp protease proteolytic subunit;protein_id=NP_631337.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8087672	8088265	.	-	.	ID=id9423;Dbxref=GeneID:1102719;Note=Pfam match to entry PF00574 CLP_protease%2C Clp protease%2C score 281.20%2C E-value 1.3e-80;gbkey=misc_feature;gene=clpP3
NC_003888.3	RefSeq	sequence_feature	8087873	8087914	.	-	.	ID=id9424;Dbxref=GeneID:1102719;Note=PS00382 Endopeptidase Clp histidine active site;gbkey=misc_feature;gene=clpP3
NC_003888.3	RefSeq	ribosome_entry_site	8088486	8088490	.	+	.	ID=id9425;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8088496	8088978	.	+	.	ID=gene7345;Dbxref=GeneID:1102720;Name=SC5H1.10c;gbkey=Gene;gene=SC5H1.10c;gene_biotype=protein_coding;gene_synonym=SC5H1.10c;locus_tag=SCO7282
NC_003888.3	RefSeq	CDS	8088496	8088978	.	+	0	ID=cds7213;Parent=gene7345;Dbxref=Genbank:NP_631338.1,GeneID:1102720;Name=NP_631338.1;Note=SC5H1.10c%2C hypothetical protein%2C len: 160 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis%2C amino acid composition and the presence of a possible RBS%3B similar to TR:Q98C01 (EMBL:AP003006) Rhizobium loti (Mesorhizobium loti) MLL5357 protein%2C 156 aa%3B fasta scores: opt: 617 Z-score: 752.0 E(): 2.9e-34%3B 58.170%25 identity in 153 aa overlap. Contains probable helix-turn-helix motif at aa 104-125 (Score 1006%2C +2.61 SD);gbkey=CDS;gene=SC5H1.10c;product=DNA-binding protein;protein_id=NP_631338.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8089092	8089097	.	+	.	ID=id9426;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8089106	8089903	.	+	.	ID=gene7346;Dbxref=GeneID:1102721;Name=SC5H1.09c;gbkey=Gene;gene=SC5H1.09c;gene_biotype=protein_coding;gene_synonym=SC5H1.09c;locus_tag=SCO7283
NC_003888.3	RefSeq	CDS	8089106	8089903	.	+	0	ID=cds7214;Parent=gene7346;Dbxref=Genbank:NP_631339.1,GeneID:1102721;Name=NP_631339.1;Note=SC5H1.09c%2C possible hydroxylase%2C len: 265 aa%3B similar to e.g. TR:Q55078 (EMBL:U50973)%2C doxA%2C Streptomyces sp. daunomycin C-14 hydroxylase (275 aa)%2C fasta scores%3B opt: 440 z-score: 519.4 E(): 1.3e-21%2C 37.5%25 identity in 259 aa overlap. Similar to SC9B10.20c (EMBL:AL009204) S.coelicolor hypothetical protein (267 aa) (34.1%25 identity in 249 aa overlap);gbkey=CDS;gene=SC5H1.09c;product=hydroxylase;protein_id=NP_631339.1;transl_table=11
NC_003888.3	RefSeq	gene	8089935	8090642	.	+	.	ID=gene7347;Dbxref=GeneID:1102722;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;gene_synonym=rnhA,SC5H1.08c;locus_tag=SCO7284
NC_003888.3	RefSeq	CDS	8089935	8090642	.	+	0	ID=cds7215;Parent=gene7347;Dbxref=Genbank:NP_631340.1,GeneID:1102722;Name=NP_631340.1;Note=SC5H1.08c%2C rnhA%2C probable ribonuclease H%2C len: 235 aa%3B similar to many e.g. SW:RNH_THETH (EMBL:X60507)%2C rhnA%2C Thermus aquaticus ribonuclease H (166 aa)%2C fasta scores%3B opt: 299 z-score: 312.2 E(): 4.6e-10%2C 38.0%25 identity in 166 aa overlap. Also similar to TR:Q54388 (EMBL:X95703)%2C rnhH%2C Streptomyces lincolnensis ribonuclease H (117 aa) (89.7%25 identity in 117 aa overlap). Has a C-terminal extension not present in the Thermus aquaticus enzyme. Contains Pfam match to entry PF00075 rnaseH%2C RNase H%2C score 52.60%2C E-value 8.9e-12;gbkey=CDS;gene=rnhA;product=ribonuclease H;protein_id=NP_631340.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8089950	8090384	.	+	.	ID=id9427;Dbxref=GeneID:1102722;Note=Pfam match to entry PF00075 rnaseH%2C RNase H%2C score 52.60%2C E-value 8.9e-12;gbkey=misc_feature;gene=rnhA
NC_003888.3	RefSeq	gene	8090745	8092010	.	+	.	ID=gene7348;Dbxref=GeneID:1102723;Name=SC5H1.07c;gbkey=Gene;gene=SC5H1.07c;gene_biotype=protein_coding;gene_synonym=SC5H1.07c;locus_tag=SCO7285
NC_003888.3	RefSeq	CDS	8090745	8092010	.	+	0	ID=cds7216;Parent=gene7348;Dbxref=Genbank:NP_631341.1,GeneID:1102723;Name=NP_631341.1;Note=SC5H1.07c%2C possible hydroxylase%2C len: 421 aa%3B weakly similar to many e.g. TR:P96555 (EMBL:AB000564) Sphingomonas sp. salicylate hydroxylase (395 aa)%2C fasta scores%3B opt: 188 z-score: 216.6 E(): 9.6e-05%2C 26.5%25 identity in 359 aa overlap and TR:Q53657 (EMBL:D38214)%2C Cts8%2C Streptomyces aureofaciens 6-hydroxylation enzyme of tetracycline (469 aa) (25.9%25 identity in 347 aa overlap). Weakly similar to SCE29.14c (EMBL:AL035707) S.coelicolor possible salicylate hydroxylase (420 aa) (29.3%25 identity in 372 aa overlap). Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 42.50%2C E-value 9.2e-09;gbkey=CDS;gene=SC5H1.07c;product=hydroxylase;protein_id=NP_631341.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8091129	8091728	.	+	.	ID=id9428;Dbxref=GeneID:1102723;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 42.50%2C E-value 9.2e-09;gbkey=misc_feature;gene=SC5H1.07c
NC_003888.3	RefSeq	gene	8092023	8093006	.	+	.	ID=gene7349;Dbxref=GeneID:1102724;Name=SC5H1.06c;gbkey=Gene;gene=SC5H1.06c;gene_biotype=protein_coding;gene_synonym=SC5H1.06c;locus_tag=SCO7286
NC_003888.3	RefSeq	CDS	8092023	8093006	.	+	0	ID=cds7217;Parent=gene7349;Dbxref=Genbank:NP_631342.1,GeneID:1102724;Name=NP_631342.1;Note=SC5H1.06c%2C hypothetical protein%2C len: 327 aa%3B weakly similar e.g. SW:GS69_BACSU (EMBL:Y14082)%2C YhdN%2C Bacillus subtilis general stress protein 69 (331 aa)%2C fasta scores%3B opt: 419 z-score: 477.8 E(): 2.7e-19%2C 29.3%25 identity in 328 aa overlap and TR:Q40648 (EMBL:U46758)%2C kob1%2C Oryza sativa potassium channel beta subunit protein (326 aa) (27.9%25 identity in 341 aa overlap). Weakly similar to SC5H1.21c%2C probable ion channel subunit (319 aa) (29.3%25 identity in 338 aa overlap);gbkey=CDS;gene=SC5H1.06c;product=oxidoreducatse;protein_id=NP_631342.1;transl_table=11
NC_003888.3	RefSeq	gene	8093034	8093387	.	-	.	ID=gene7350;Dbxref=GeneID:1102725;Name=SC5H1.05;gbkey=Gene;gene=SC5H1.05;gene_biotype=protein_coding;gene_synonym=SC5H1.05;locus_tag=SCO7287
NC_003888.3	RefSeq	CDS	8093034	8093387	.	-	0	ID=cds7218;Parent=gene7350;Dbxref=Genbank:NP_631343.1,GeneID:1102725;Name=NP_631343.1;Note=SC5H1.05%2C hypothetical protein%2C len: 117 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and amino acid composition;gbkey=CDS;gene=SC5H1.05;product=hypothetical protein;protein_id=NP_631343.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8093397	8093400	.	-	.	ID=id9429;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8093532	8093536	.	+	.	ID=id9430;Note=posisble RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8093542	8094045	.	+	.	ID=gene7351;Dbxref=GeneID:1102726;Name=SC5H1.04c;gbkey=Gene;gene=SC5H1.04c;gene_biotype=protein_coding;gene_synonym=SC5H1.04c;locus_tag=SCO7288
NC_003888.3	RefSeq	CDS	8093542	8094045	.	+	0	ID=cds7219;Parent=gene7351;Dbxref=Genbank:NP_631344.1,GeneID:1102726;Name=NP_631344.1;Note=SC5H1.04c%2C possible membrane protein%2C len: 167 aa%3B unknown function%2C probable CDS suggested by positional base preference%2C GC frame analysis and the presence of a possible RBS%3B similar to TR:Q9AJX8 (EMBL:AL512944) Streptomyces coelicolor integral membrane protein SC8D11.43c%2C 184 aa%3B fasta scores: opt: 505 Z-score: 606.1 E(): 4e-26%3B 48.667%25 identity in 150 aa overlap. Contains hydrophobic%2C possible membrane-spanning regions;gbkey=CDS;gene=SC5H1.04c;product=hypothetical protein;protein_id=NP_631344.1;transl_table=11
NC_003888.3	RefSeq	gene	8094134	8094562	.	-	.	ID=gene7352;Dbxref=GeneID:1102727;Name=SC5H1.03;gbkey=Gene;gene=SC5H1.03;gene_biotype=protein_coding;gene_synonym=SC5H1.03;locus_tag=SCO7289
NC_003888.3	RefSeq	CDS	8094134	8094562	.	-	0	ID=cds7220;Parent=gene7352;Dbxref=Genbank:NP_631345.1,GeneID:1102727;Name=NP_631345.1;Note=SC5H1.03%2C possible regulator%2C len: 142 aa%3B similar to TR:P95753 (EMBL:D50051)%2C ssgA%2C Streptomyces griseus gene involved in regulation of sporulation and cell division (136 aa)%2C fasta scores%3B opt: 175 z-score: 240.4 E(): 4.6e-06%2C 32.5%25 identity in 120 aa overlap. Similar to SC5F2A.05c (EMBL:AL049587) S.coelicolor possible regulator (138 aa) (33.8%25 identity in 145 aa overlap);gbkey=CDS;gene=SC5H1.03;product=regulator;protein_id=NP_631345.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8094568	8094572	.	-	.	ID=id9431;Note=possible RBS;gbkey=RBS
NC_003888.3	RefSeq	gene	8094656	8095633	.	-	.	ID=gene7353;Dbxref=GeneID:1102728;Name=SC5H1.02;gbkey=Gene;gene=SC5H1.02;gene_biotype=protein_coding;gene_synonym=SC5H1.02;locus_tag=SCO7290
NC_003888.3	RefSeq	CDS	8094656	8095633	.	-	0	ID=cds7221;Parent=gene7353;Dbxref=Genbank:NP_631346.1,GeneID:1102728;Name=NP_631346.1;Note=SC5H1.02%2C probable dehydrogenase%2C len: 325 aa%3B similar to many e.g. TR:O68447 (EMBL:AF041061)%2C fgd%2C Mycobacterium smegmatis F420-dependent glucose-6-phosphate dehydrogenase (336 aa)%2C fasta scores%3B opt: 461 z-score: 553.9 E(): 1.6e-23%2C 33.4%25 identity in 335 aa overlap. N-terminus similar to N-terminus of SCD78.18c (EMBL:AL034355) S.coelicolor hypothetical protein (320 aa) (31.7%25 identity in 183 aa overlap);gbkey=CDS;gene=SC5H1.02;product=dehydrogenase;protein_id=NP_631346.1;transl_table=11
NC_003888.3	RefSeq	gene	8095690	8097306	.	-	.	ID=gene7354;Dbxref=GeneID:1102729;Name=SC5F8.01c;gbkey=Gene;gene=SC5F8.01c;gene_biotype=protein_coding;gene_synonym=SC5F8.01c,SC5H1.01;locus_tag=SCO7291
NC_003888.3	RefSeq	CDS	8095690	8097306	.	-	0	ID=cds7222;Parent=gene7354;Dbxref=Genbank:NP_733728.1,GeneID:1102729;Name=NP_733728.1;Note=SC5H1.01%2C probable Ser/Thr protein kinase%2C partial CDS%2C len: >459 aa%3B similar to many eukaryotic-type e.g. SW:AFSK_STRCO (EMBL:D15062)%2C afsK%2C Streptomyces coelicolor eukaryotic-type protein kinase involved in secondary metabolism (799 aa)%2C fasta scores%3B opt: 261 z-score: 221.3 E(): 5.3e-05%2C 30.3%25 identity in 498 aa overlap and SW:KRCB_RAT (EMBL:D30041) Rattus norvegicus RAC-beta Ser/Thr kinase (481 aa) (31.4%25 identity in 169 aa overlap). A hydrophobic region is present%2C so it is possible that the protein spans a membrane. Contains Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 30.80%2C E-value 1.9e-07~SC5F8.01c%2C possible Ser/Thr protein kinase%2C partials CDS%2C len:> 114 aa. Similar to many proposed Streptomyces coelicolor Ser/Thr protein kinases e.g. TR:CAB82014(EMBL:AL161755) SCD63.07 (717 aa)%2C fasta scores opt: 172 z-score: 222.0 E(): 6.8e-05 33.0%25 identity in 103 aa overlap. Overlaps and extends into CDS SC5H1.01 on the adjoining cosmid.;gbkey=CDS;gene=SC5F8.01c;product=Ser/Thr protein kinase;protein_id=NP_733728.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8096539	8097021	.	-	.	ID=id9432;Dbxref=GeneID:1102729;Note=Pfam match to entry PF00069 pkinase%2C Eukaryotic protein kinase domain%2C score 30.80%2C E-value 1.9e-07;gbkey=misc_feature;gene=SC5F8.01c
NC_003888.3	RefSeq	gene	8097454	8098413	.	-	.	ID=gene7355;Dbxref=GeneID:1102730;Name=SC5F8.02c;gbkey=Gene;gene=SC5F8.02c;gene_biotype=protein_coding;gene_synonym=SC5F8.02c;locus_tag=SCO7292
NC_003888.3	RefSeq	CDS	8097454	8098413	.	-	0	ID=cds7223;Parent=gene7355;Dbxref=Genbank:NP_631347.1,GeneID:1102730;Name=NP_631347.1;Note=SC5F8.02c%2C possible threonine dehydratase%2C len: 319 aa. Similar to many including: Escherichia coli SW:THD2_ECOLI(EMBL:M21312) threonine dehydratase catabolic (EC 4.2.1.16) TdcB (329 aa)%2C fasta scores opt: 609 z-score: 676.6 E(): 3.2e-30 39.4%25 identity in 312 aa overlap. Contains a Prosite hit to Ser/Thr dehydratases pyridoxal-phosphate attachment site and a Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzyme.;gbkey=CDS;gene=SC5F8.02c;product=threonine dehydratase;protein_id=NP_631347.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8097508	8098374	.	-	.	ID=id9433;Dbxref=GeneID:1102730;Note=Pfam match to entry PF00291 S_T_dehydratase%2C Pyridoxal-phosphate dependent enzyme%2C score 210.10%2C E-value 3.3e-59;gbkey=misc_feature;gene=SC5F8.02c
NC_003888.3	RefSeq	sequence_feature	8098249	8098290	.	-	.	ID=id9434;Dbxref=GeneID:1102730;Note=PS00165 Ser/Thr dehydratases pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SC5F8.02c
NC_003888.3	RefSeq	gene	8098439	8099116	.	-	.	ID=gene7356;Dbxref=GeneID:1102731;Name=SC5F8.03c;gbkey=Gene;gene=SC5F8.03c;gene_biotype=protein_coding;gene_synonym=SC5F8.03c;locus_tag=SCO7293
NC_003888.3	RefSeq	CDS	8098439	8099116	.	-	0	ID=cds7224;Parent=gene7356;Dbxref=Genbank:NP_631348.1,GeneID:1102731;Name=NP_631348.1;Note=SC5F8.03c%2C hypothetical protein%2C len: 225 aa. Similar to several proteins of undefined function including: Deinococcus radiodurans TR:Q9RWP1 (EMBL:AE001920) conserved hypothetical protein (254 aa)%2C fasta scores opt: 467 z-score: 555.6 E(): 1.8e-23 36.6%25 identity in 205 aa overlap and Streptomyces coelicolor TR:CAB70638 (EMBL:AL137242) SC8F4.12C (239 aa)%2C fasta scores opt: 397 z-score: 474.2 E(): 6.1e-19 36.1%25 identity in 183 aa overlap;gbkey=CDS;gene=SC5F8.03c;product=hypothetical protein;protein_id=NP_631348.1;transl_table=11
NC_003888.3	RefSeq	gene	8099128	8100432	.	-	.	ID=gene7357;Dbxref=GeneID:1102732;Name=SC5F8.04c;gbkey=Gene;gene=SC5F8.04c;gene_biotype=protein_coding;gene_synonym=SC5F8.04c;locus_tag=SCO7294
NC_003888.3	RefSeq	CDS	8099128	8100432	.	-	0	ID=cds7225;Parent=gene7357;Dbxref=Genbank:NP_631349.1,GeneID:1102732;Name=NP_631349.1;Note=SC5F8.04c%2C hypothetical protein%2C len: 434 aa. Similar to Streptomyces coelicolor TR:Q9X9W9 (EMBL:AL096743) transport associated protein%2C SCI7.21 (399 aa)%2C fasta scores opt: 428 z-score: 449.2 E(): 1.5e-17 38.3%25 identity in 209 aa overlap;gbkey=CDS;gene=SC5F8.04c;product=hypothetical protein;protein_id=NP_631349.1;transl_table=11
NC_003888.3	RefSeq	gene	8100524	8103490	.	-	.	ID=gene7358;Dbxref=GeneID:1102733;Name=SC5F8.05c;gbkey=Gene;gene=SC5F8.05c;gene_biotype=protein_coding;gene_synonym=SC5F8.05c;locus_tag=SCO7295
NC_003888.3	RefSeq	CDS	8100524	8103490	.	-	0	ID=cds7226;Parent=gene7358;Dbxref=Genbank:NP_631350.1,GeneID:1102733;Name=NP_631350.1;Note=SC5F8.05c%2C possible LuxR-family regulator%2C len: 988 aa. Similar to several other regulators from Streptomyces coelicolor including: TR:Q9XAN4 (EMBL:AL079355) SC4C6.06 (893 aa)%2C fasta scores opt: 305 z-score: 328.7 E(): 7.7e-11 26.4%25 identity in 910 aa overlap and TR:Q9Z573 (EMBL:AL035569) SC8D9.18 (1091 aa)%2C fasta scores opt: 857 z-score: 926.1 E(): 0 36.5%25 identity in 1077 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop) Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family.;gbkey=CDS;gene=SC5F8.05c;product=LuxR family transcriptional regulator;protein_id=NP_631350.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8100545	8100742	.	-	.	ID=id9435;Dbxref=GeneID:1102733;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 93.60%2C E-value 4e-24;gbkey=misc_feature;gene=SC5F8.05c
NC_003888.3	RefSeq	sequence_feature	8103344	8103367	.	-	.	ID=id9436;Dbxref=GeneID:1102733;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5F8.05c
NC_003888.3	RefSeq	gene	8103557	8103910	.	-	.	ID=gene7359;Dbxref=GeneID:1102734;Name=SC5F8.06c;gbkey=Gene;gene=SC5F8.06c;gene_biotype=protein_coding;gene_synonym=SC5F8.06c;locus_tag=SCO7296
NC_003888.3	RefSeq	CDS	8103557	8103910	.	-	0	ID=cds7227;Parent=gene7359;Dbxref=Genbank:NP_631351.1,GeneID:1102734;Name=NP_631351.1;Note=SC5F8.06c%2C unknown%2C len: 117 aa. Similar in parts to Streptomyces coelicolor TR:Q9R3I9(EMBL:AJ249450) hypothetical 9.6 kd protein (86 aa)%2C fasta scores opt: 295 z-score: 318.5 E(): 2.8e-10 51.4%25 identity in 72 aa overlap.;gbkey=CDS;gene=SC5F8.06c;product=hypothetical protein;protein_id=NP_631351.1;transl_table=11
NC_003888.3	RefSeq	gene	8103907	8105400	.	-	.	ID=gene7360;Dbxref=GeneID:1102735;Name=SC5F8.07c;gbkey=Gene;gene=SC5F8.07c;gene_biotype=protein_coding;gene_synonym=SC5F8.07c;locus_tag=SCO7297
NC_003888.3	RefSeq	CDS	8103907	8105400	.	-	0	ID=cds7228;Parent=gene7360;Dbxref=Genbank:NP_631352.1,GeneID:1102735;Name=NP_631352.1;Note=SC5F8.07c%2C possible two-component sensor histidine kinase%2C len: 492 aa. The C-terminus of this protein is similar to many sensor histidine protein kinases e.g. Salmonella typhimurium SW:NTRB_SALTY (EMBL:X85104) nitrogen regulation protein NR(II) (EC 2.7.3.-) (349 aa)%2C fasta scores opt: 313 z-score: 363.5 E(): 8.9e-13 27.9%25 identity in 297 aa overlap. Contains a Pfam match to entry PF00512 signal%2C Histidine kinase. Also contains a 4xTPD repeat in the C-terminus.;gbkey=CDS;gene=SC5F8.07c;product=two-component sensor histidine kinase;protein_id=NP_631352.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8103916	8103920	.	-	.	ID=id9437;Dbxref=GeneID:1102735;gbkey=RBS;gene=SC5F8.07c
NC_003888.3	RefSeq	repeat_region	8103922	8103948	.	-	.	ID=id9438;Dbxref=GeneID:1102735;Note=repeat region containing 3xGATCCCACC translated in CDS SC5F8.07c.;gbkey=repeat_region;gene=SC5F8.07c
NC_003888.3	RefSeq	sequence_feature	8103985	8104566	.	-	.	ID=id9439;Dbxref=GeneID:1102735;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 103.20%2C E-value 5e-27;gbkey=misc_feature;gene=SC5F8.07c
NC_003888.3	RefSeq	gene	8105397	8107073	.	-	.	ID=gene7361;Dbxref=GeneID:1102736;Name=SC5F8.08c;gbkey=Gene;gene=SC5F8.08c;gene_biotype=protein_coding;gene_synonym=SC5F8.08c;locus_tag=SCO7298
NC_003888.3	RefSeq	CDS	8105397	8107073	.	-	0	ID=cds7229;Parent=gene7361;Dbxref=Genbank:NP_631353.1,GeneID:1102736;Name=NP_631353.1;Note=SC5F8.08c%2C possible thioredoxin reductase%2C len: 558 aa. The C-terminus of this protein is highly similar to many thioredoxin reductases including: Streptomyces clavuligerus SW:TRXB_STRCL(EMBL:Z21946) thioredoxin reductase (EC 1.6.4.5) (321 aa)%2C fasta scores opt: 494 z-score: 519.8 E(): 1.7e-21 32.8%25 identity in 332 aa overlap. The N-terminus is similar to the receiver domains of many response regulators e.g. Alcaligenes eutrophus SW:HOXA_ALCEU(EMBL:M64593) hydrogenase transcriptional regulatory protein%2C HoxA (482 aa) (32%25 identity over a 117 aa overlap). Contains Pfam matches to entries PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase and PF00072 response_reg%2C Response regulator receiver domain.;gbkey=CDS;gene=SC5F8.08c;product=thioredoxin reductase;protein_id=NP_631353.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8105406	8105409	.	-	.	ID=id9440;Dbxref=GeneID:1102736;gbkey=RBS;gene=SC5F8.08c
NC_003888.3	RefSeq	sequence_feature	8105598	8106371	.	-	.	ID=id9441;Dbxref=GeneID:1102736;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 89.90%2C E-value 8.8e-26;gbkey=misc_feature;gene=SC5F8.08c
NC_003888.3	RefSeq	sequence_feature	8106684	8107046	.	-	.	ID=id9442;Dbxref=GeneID:1102736;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 35.60%2C E-value 1.2e-06;gbkey=misc_feature;gene=SC5F8.08c
NC_003888.3	RefSeq	gene	8107218	8108156	.	+	.	ID=gene7362;Dbxref=GeneID:1102737;Name=SC5F8.09;gbkey=Gene;gene=SC5F8.09;gene_biotype=protein_coding;gene_synonym=SC5F8.09;locus_tag=SCO7299
NC_003888.3	RefSeq	CDS	8107218	8108156	.	+	0	ID=cds7230;Parent=gene7362;Dbxref=Genbank:NP_631354.1,GeneID:1102737;Name=NP_631354.1;Note=SC5F8.09%2C possible stress-inducible protein%2C len:312 aa. Highly similar to many proteins of undefined function e.g. Streptomyces coelicolor TR:Q9RIY4(EMBL:AL109962) hypothetical 34.7 kd protein%2C SCJ1.30C (328 aa)%2C fasta scores opt: 604 z-score: 654.8 E(): 5.3e-29 41.8%25 identity in 328 aa overlap. Contains 2xPfam match to entry PF00582 Usp%2C Universal stress protein family.;gbkey=CDS;gene=SC5F8.09;product=stress-inducible protein;protein_id=NP_631354.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8107383	8107688	.	+	.	ID=id9443;Dbxref=GeneID:1102737;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 29.20%2C E-value 9.3e-05;gbkey=misc_feature;gene=SC5F8.09
NC_003888.3	RefSeq	sequence_feature	8107821	8108144	.	+	.	ID=id9444;Dbxref=GeneID:1102737;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 66.50%2C E-value 5.8e-16;gbkey=misc_feature;gene=SC5F8.09
NC_003888.3	RefSeq	gene	8108173	8109405	.	-	.	ID=gene7363;Dbxref=GeneID:1102738;Name=SC5F8.10c;gbkey=Gene;gene=SC5F8.10c;gene_biotype=protein_coding;gene_synonym=SC5F8.10c;locus_tag=SCO7300
NC_003888.3	RefSeq	CDS	8108173	8109405	.	-	0	ID=cds7231;Parent=gene7363;Dbxref=Genbank:NP_631355.1,GeneID:1102738;Name=NP_631355.1;Note=SC5F8.10c%2C unknown%2C len: 410 aa.;gbkey=CDS;gene=SC5F8.10c;product=hypothetical protein;protein_id=NP_631355.1;transl_table=11
NC_003888.3	RefSeq	gene	8109415	8110161	.	-	.	ID=gene7364;Dbxref=GeneID:1102739;Name=SC5F8.11c;gbkey=Gene;gene=SC5F8.11c;gene_biotype=protein_coding;gene_synonym=SC5F8.11c;locus_tag=SCO7301
NC_003888.3	RefSeq	CDS	8109415	8110161	.	-	0	ID=cds7232;Parent=gene7364;Dbxref=Genbank:NP_631356.1,GeneID:1102739;Name=NP_631356.1;Note=SC5F8.11c%2C unknown%2C len: 248 aa. Highly similar to many beta-lactamases including: Mycobacterium avium TR:Q9XC16(EMBL:AF152394) beta-lactamase%2C BllP (247 aa)%2C fasta scores opt: 789 z-score: 885.8 E():0 48.1%25 identity in 241 aa overlap. Contains a Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily.;gbkey=CDS;gene=SC5F8.11c;product=hypothetical protein;protein_id=NP_631356.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8109478	8110119	.	-	.	ID=id9445;Dbxref=GeneID:1102739;Note=Pfam match to entry PF00753 lactamase_B%2C Metallo-beta-lactamase superfamily%2C score 96.00%2C E-value 7.6e-25;gbkey=misc_feature;gene=SC5F8.11c
NC_003888.3	RefSeq	ribosome_entry_site	8110165	8110168	.	-	.	ID=id9446;gbkey=RBS
NC_003888.3	RefSeq	gene	8110240	8110872	.	-	.	ID=gene7365;Dbxref=GeneID:1102740;Name=SC5F8.12c;gbkey=Gene;gene=SC5F8.12c;gene_biotype=protein_coding;gene_synonym=SC5F8.12c;locus_tag=SCO7302
NC_003888.3	RefSeq	CDS	8110240	8110872	.	-	0	ID=cds7233;Parent=gene7365;Dbxref=Genbank:NP_631357.1,GeneID:1102740;Name=NP_631357.1;Note=SC5F8.12c%2C hypothetical protein%2C len: 210 aa%3B similar to TR:AAK45279 (EMBL:AE006986) Mycobacterium tuberculosis CDC1551 hypothetical protein MT1029%2C 205 aa%3B fasta scores: opt: 784 Z-score: 926.8 E(): 5.5e-44%3B 56.796%25 identity in 206 aa overlap;gbkey=CDS;gene=SC5F8.12c;product=hypothetical protein;protein_id=NP_631357.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8110885	8110889	.	-	.	ID=id9447;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8111057	8111062	.	+	.	ID=id9448;gbkey=RBS
NC_003888.3	RefSeq	gene	8111066	8111647	.	+	.	ID=gene7366;Dbxref=GeneID:1102741;Name=SC5F8.13;gbkey=Gene;gene=SC5F8.13;gene_biotype=protein_coding;gene_synonym=SC5F8.13;locus_tag=SCO7303
NC_003888.3	RefSeq	CDS	8111066	8111647	.	+	0	ID=cds7234;Parent=gene7366;Dbxref=Genbank:NP_631358.1,GeneID:1102741;Name=NP_631358.1;Note=SC5F8.13%2C possible TetR-family regulator%2C len: 193 aa. Weakly similar to Pseudomonas putida TR:O33453(EMBL:U24215) regulator of the p-cymene and p-Cumate catabolic operons%2C CymR (203 aa)%2C fasta scores opt: 174 z-score: 221.1 E(): 7.6e-05 28.2%25 identity in 174 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=CDS;gene=SC5F8.13;product=TetR family transcriptional regulator;protein_id=NP_631358.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8111084	8111224	.	+	.	ID=id9449;Dbxref=GeneID:1102741;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 55.10%2C E-value 1.1e-12;gbkey=misc_feature;gene=SC5F8.13
NC_003888.3	RefSeq	gene	8111687	8113360	.	+	.	ID=gene7367;Dbxref=GeneID:1102742;Name=SC5F8.14;gbkey=Gene;gene=SC5F8.14;gene_biotype=protein_coding;gene_synonym=SC5F8.14;locus_tag=SCO7304
NC_003888.3	RefSeq	CDS	8111687	8113360	.	+	0	ID=cds7235;Parent=gene7367;Dbxref=Genbank:NP_631359.1,GeneID:1102742;Name=NP_631359.1;Note=proposed role in polysaccahride synthesis;gbkey=CDS;gene=SC5F8.14;product=FAD-binding dehydrogenase;protein_id=NP_631359.1;transl_table=11
NC_003888.3	RefSeq	gene	8113394	8113747	.	-	.	ID=gene7368;Dbxref=GeneID:1102743;Name=SC5F8.15c;gbkey=Gene;gene=SC5F8.15c;gene_biotype=protein_coding;gene_synonym=SC5F8.15c;locus_tag=SCO7305
NC_003888.3	RefSeq	CDS	8113394	8113747	.	-	0	ID=cds7236;Parent=gene7368;Dbxref=Genbank:NP_631360.1,GeneID:1102743;Name=NP_631360.1;Note=SC5F8.15c%2C unknown%2C len: 117 aa. Highly similar to several proteins of undefined function including: Mycobacterium tuberculosis SW:YD08_MYCTU(EMBL:Z83866) (118 aa)%2C fasta scores opt: 334 z-score: 429.2 E(): 1.9e-16 49.1%25 identity in 112 aa overlap and Escherichia coli SW:YEAO_ECOLI(EMBL:AE000274) (122 aa)%2C fasta scores opt: 296 z-score: 382.1 E(): 8.2e-14 42.7%25 identity in 110 aa overlap.;gbkey=CDS;gene=SC5F8.15c;product=hypothetical protein;protein_id=NP_631360.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8113754	8113758	.	-	.	ID=id9450;gbkey=RBS
NC_003888.3	RefSeq	gene	8113809	8114060	.	-	.	ID=gene7369;Dbxref=GeneID:1102744;Name=SC5F8.16c;gbkey=Gene;gene=SC5F8.16c;gene_biotype=protein_coding;gene_synonym=SC5F8.16c;locus_tag=SCO7306
NC_003888.3	RefSeq	CDS	8113809	8114060	.	-	0	ID=cds7237;Parent=gene7369;Dbxref=Genbank:NP_631361.1,GeneID:1102744;Name=NP_631361.1;Note=SC5F8.16c%2C regulatory protein%2C len: 83 aa. Highly similar to several e.g. Streptomyces coelicolor TR:CAB88918(EMBL:AL353862) regulatory protein%2C WhiB%2C essential for sporulation (87 aa)%2C fasta scores opt: 214 z-score: 299.5 E(): 3.3e-09 45.1%25 identity in 71 aa overlap.;gbkey=CDS;gene=SC5F8.16c;product=regulatory protein;protein_id=NP_631361.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8114066	8114071	.	-	.	ID=id9451;gbkey=RBS
NC_003888.3	RefSeq	gene	8114185	8115087	.	-	.	ID=gene7370;Dbxref=GeneID:1102745;Name=SC5F8.17c;gbkey=Gene;gene=SC5F8.17c;gene_biotype=protein_coding;gene_synonym=SC5F8.17c;locus_tag=SCO7307
NC_003888.3	RefSeq	CDS	8114185	8115087	.	-	0	ID=cds7238;Parent=gene7370;Dbxref=Genbank:NP_631362.1,GeneID:1102745;Name=NP_631362.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;gene=SC5F8.17c;product=chromosome replication initiation inhibitor protein;protein_id=NP_631362.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8114641	8115060	.	-	.	ID=id9452;Dbxref=GeneID:1102745;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 83.60%2C E-value 4e-21;gbkey=misc_feature;gene=SC5F8.17c
NC_003888.3	RefSeq	sequence_feature	8114926	8115018	.	-	.	ID=id9453;Dbxref=GeneID:1102745;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC5F8.17c
NC_003888.3	RefSeq	gene	8115165	8115779	.	+	.	ID=gene7371;Dbxref=GeneID:1102746;Name=SC5F8.18;gbkey=Gene;gene=SC5F8.18;gene_biotype=protein_coding;gene_synonym=SC5F8.18;locus_tag=SCO7308
NC_003888.3	RefSeq	CDS	8115165	8115779	.	+	0	ID=cds7239;Parent=gene7371;Dbxref=Genbank:NP_631363.1,GeneID:1102746;Name=NP_631363.1;Note=SC5F8.18%2C possible membrane transport protein%2C len: 204 aa. Highly similar to many including: Corynebacterium glutamicum SW:LYSE_CORGL(EMBL:X96471) lysine exporter protein%2C LysE (236 aa)%2C fasta scores opt: 201 z-score: 247.8 E(): 2.5e-06 34.8%25 identity in 224 aa overlap and to many hypothetical proteins e.g. Mycobacterium tuberculosis SW:YW33_MYCTU(EMBL:Z74025) (199 aa)%2C fasta scores opt: 668 z-score: 801.1 E(): 0 54.0%25 identity in 200 aa overlap. Contains a Pfam match to entry PF01810 LysE%2C LysE type translocator and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC5F8.18;product=membrane transport protein;protein_id=NP_631363.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8115369	8115692	.	+	.	ID=id9454;Dbxref=GeneID:1102746;Note=Pfam match to entry PF01810 LysE%2C LysE type translocator%2C score 78.60%2C E-value 1.3e-19;gbkey=misc_feature;gene=SC5F8.18
NC_003888.3	RefSeq	gene	8115853	8117187	.	+	.	ID=gene7372;Dbxref=GeneID:1102747;Name=SC5F8.19;gbkey=Gene;gene=SC5F8.19;gene_biotype=protein_coding;gene_synonym=SC5F8.19;locus_tag=SCO7309
NC_003888.3	RefSeq	CDS	8115853	8117187	.	+	0	ID=cds7240;Parent=gene7372;Dbxref=Genbank:NP_631364.1,GeneID:1102747;Name=NP_631364.1;Note=SC5F8.19%2C possible membrane transport protein%2C len: 444 aa. Similar to many including: Streptococcus pyogenes TR:P95827(EMBL:U70055) macrolide-efflux protein%2C MefA (405 aa)%2C fasta scores opt: 339 z-score: 368.8 E(): 4.5e-13 23.1%25 identity in 399 aa overlap and Streptomyces coelicolor TR:Q9RKR4(EMBL:AL133220) integral membrane protein%2C SCC75A.10 (431 aa)%2C fasta scores opt: 895 z-score: 962.2 E(): 0 38.2%25 identity in 408 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC5F8.19;product=membrane transport protein;protein_id=NP_631364.1;transl_table=11
NC_003888.3	RefSeq	gene	8117195	8117650	.	-	.	ID=gene7373;Dbxref=GeneID:1102748;Name=SC5F8.20c;gbkey=Gene;gene=SC5F8.20c;gene_biotype=protein_coding;gene_synonym=SC5F8.20c;locus_tag=SCO7310
NC_003888.3	RefSeq	CDS	8117195	8117650	.	-	0	ID=cds7241;Parent=gene7373;Dbxref=Genbank:NP_631365.1,GeneID:1102748;Name=NP_631365.1;Note=SC5F8.20c%2C possible regulatory protein%2C len: 151 aa. Similar in parts to Pseudomonas sp.TR:O52578 (EMBL:AF040987)  FNR-like regulator%2C NnrR (223 aa)%2C fasta scores opt: 161 z-score: 223.3 E(): 5.7e-05 25.2%25 identity in 131 aa overlap and Streptomyces coelicolor TR:Q9RIZ7 (EMBL:AL109962) possible regulator protein%2C SCJ1.17 (190 aa)%2C fasta scores opt: 500 z-score: 675.2 E(): 3.8e-30 49.7%25 identity in 151 aa overlap. Contains a Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain.;gbkey=CDS;gene=SC5F8.20c;product=regulatory protein;protein_id=NP_631365.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8117306	8117587	.	-	.	ID=id9455;Dbxref=GeneID:1102748;Note=Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain%2C score 38.00%2C E-value 2.2e-07;gbkey=misc_feature;gene=SC5F8.20c
NC_003888.3	RefSeq	gene	8118005	8119483	.	-	.	ID=gene7374;Dbxref=GeneID:1102749;Name=SC5F8.21c;gbkey=Gene;gene=SC5F8.21c;gene_biotype=protein_coding;gene_synonym=SC5F8.21c;locus_tag=SCO7311
NC_003888.3	RefSeq	CDS	8118005	8119483	.	-	0	ID=cds7242;Parent=gene7374;Dbxref=Genbank:NP_631366.1,GeneID:1102749;Name=NP_631366.1;Note=SC5F8.21c%2C probable amino acid decarboxylase%2C len: 492 aa. Similar to many e.g. Bacillus subtilis SW:DCLY_BACSU (EMBL:X58433) lysine decarboxylase (EC 4.1.1.18) (490 aa)%2C fasta scores: opt: 1108 z-score: 1197.8 E():0 35.6%25 identity in 494 aa overlap. Contains a Pfam match to entry PF01276 OKR_DC_1%2C Orn/Lys/Arg decarboxylase.;gbkey=CDS;gene=SC5F8.21c;product=amino acid decarboxylase;protein_id=NP_631366.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8118008	8119468	.	-	.	ID=id9456;Dbxref=GeneID:1102749;Note=Pfam match to entry PF01276 OKR_DC_1%2C Orn/Lys/Arg decarboxylase%2C score 205.40%2C E-value 8.5e-58;gbkey=misc_feature;gene=SC5F8.21c
NC_003888.3	RefSeq	gene	8119513	8119746	.	-	.	ID=gene7375;Dbxref=GeneID:1102750;Name=SC5F8.22c;gbkey=Gene;gene=SC5F8.22c;gene_biotype=protein_coding;gene_synonym=SC5F8.22c;locus_tag=SCO7312
NC_003888.3	RefSeq	CDS	8119513	8119746	.	-	0	ID=cds7243;Parent=gene7375;Dbxref=Genbank:NP_631367.1,GeneID:1102750;Name=NP_631367.1;Note=SC5F8.22c%2C unknown%2C len: 77 aa.;gbkey=CDS;gene=SC5F8.22c;product=hypothetical protein;protein_id=NP_631367.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8119750	8119753	.	-	.	ID=id9457;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8119891	8119894	.	+	.	ID=id9458;gbkey=RBS
NC_003888.3	RefSeq	gene	8119902	8120348	.	+	.	ID=gene7376;Dbxref=GeneID:1102751;Name=SC5F8.23;gbkey=Gene;gene=SC5F8.23;gene_biotype=protein_coding;gene_synonym=SC5F8.23;locus_tag=SCO7313
NC_003888.3	RefSeq	CDS	8119902	8120348	.	+	0	ID=cds7244;Parent=gene7376;Dbxref=Genbank:NP_631368.1,GeneID:1102751;Name=NP_631368.1;Note=SC5F8.23%2C unknown%2C len: 148 aa. Weakly similar to several regulatory proteins e.g. Streptomyces coelicolor A3(2) TR:Q9RIS7(EMBL:AJ249581) regulator of sig15 (170 aa)%2C fasta scores opt: 144 z-score: 184.4 E(): 0.0084 36.1%25 identity in 133 aa overlap and Streptomyces coelicolor TR:Q9RD41(EMBL:AL133422) SCM1.01C (147 aa)%2C fasta scores opt: 225 z-score: 281.4 E(): 3.3e-08 36.6%25 identity in 131 aa overlap.;gbkey=CDS;gene=SC5F8.23;product=hypothetical protein;protein_id=NP_631368.1;transl_table=11
NC_003888.3	RefSeq	gene	8120541	8121440	.	+	.	ID=gene7377;Dbxref=GeneID:1102752;Name=SC5F8.24;gbkey=Gene;gene=SC5F8.24;gene_biotype=protein_coding;gene_synonym=SC5F8.24;locus_tag=SCO7314
NC_003888.3	RefSeq	CDS	8120541	8121440	.	+	0	ID=cds7245;Parent=gene7377;Dbxref=Genbank:NP_631369.1,GeneID:1102752;Name=NP_631369.1;Note=SC5F8.24%2C probable RNA polymerase sigma factor%2C len: 299 aa. Highly similar to many e.g. Streptomyces coelicolor SW:RPOF_STRCO (EMBL:L11648) RNA polymerase sigma-F factor%2C SigF (287 aa)%2C fasta scores opt: 687 z-score: 772.9 E(): 0 43.6%25 identity in 275 aa overlap. Contains a Pfam match to entry PF00140 sigma70%2C Sigma-70 factor and a  helix-turn-helix motif situated between residues 242..263 (+6.95 SD).;gbkey=CDS;gene=SC5F8.24;product=RNA polymerase sigma factor;protein_id=NP_631369.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8120688	8121353	.	+	.	ID=id9459;Dbxref=GeneID:1102752;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 189.70%2C E-value 4.7e-53;gbkey=misc_feature;gene=SC5F8.24
NC_003888.3	RefSeq	gene	8121460	8121699	.	+	.	ID=gene7378;Dbxref=GeneID:1102753;Name=SC5F8.25;gbkey=Gene;gene=SC5F8.25;gene_biotype=protein_coding;gene_synonym=SC5F8.25;locus_tag=SCO7315
NC_003888.3	RefSeq	CDS	8121460	8121699	.	+	0	ID=cds7246;Parent=gene7378;Dbxref=Genbank:NP_631370.1,GeneID:1102753;Name=NP_631370.1;Note=SC5F8.25%2C unknown%2C len: 79 aa. Similar to Streptomyces coelicolor TR:O54206(EMBL:AJ001206) hypothetical protein%2C PepA (90 aa)%2C fasta scores opt: 106 z-score: 152.7 E():0.49 32.2%25 identity in 87 aa overlap.;gbkey=CDS;gene=SC5F8.25;product=hypothetical protein;protein_id=NP_631370.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8121748	8121752	.	+	.	ID=id9460;gbkey=RBS
NC_003888.3	RefSeq	gene	8121760	8122602	.	+	.	ID=gene7379;Dbxref=GeneID:1102754;Name=SC5F8.26;gbkey=Gene;gene=SC5F8.26;gene_biotype=protein_coding;gene_synonym=SC5F8.26;locus_tag=SCO7316
NC_003888.3	RefSeq	CDS	8121760	8122602	.	+	0	ID=cds7247;Parent=gene7379;Dbxref=Genbank:NP_631371.1,GeneID:1102754;Name=NP_631371.1;Note=SC5F8.26%2C possible integral membrane protein%2C len: 280 aa. Similar to Bacillus subtilis SW:YXXB_BACSU(EMBL:D45912) hypothetical 31.8 kd protein (289 aa)%2C fasta scores opt: 476 z-score: 539.7 E(): 1.4e-22 31.0%25 identity in 245 aa overlap. Contains multiple possible membrane spanning hydrophobic domains;gbkey=CDS;gene=SC5F8.26;product=hypothetical protein;protein_id=NP_631371.1;transl_table=11
NC_003888.3	RefSeq	gene	8122631	8123065	.	+	.	ID=gene7380;Dbxref=GeneID:1102755;Name=SC5F8.27;gbkey=Gene;gene=SC5F8.27;gene_biotype=protein_coding;gene_synonym=SC5F8.27;locus_tag=SCO7317
NC_003888.3	RefSeq	CDS	8122631	8123065	.	+	0	ID=cds7248;Parent=gene7380;Dbxref=Genbank:NP_631372.1,GeneID:1102755;Name=NP_631372.1;Note=SC5F8.27%2C unknown%2C len: 144 aa.;gbkey=CDS;gene=SC5F8.27;product=hypothetical protein;protein_id=NP_631372.1;transl_table=11
NC_003888.3	RefSeq	gene	8123089	8125347	.	-	.	ID=gene7381;Dbxref=GeneID:1102756;Name=SC5F8.28c;gbkey=Gene;gene=SC5F8.28c;gene_biotype=protein_coding;gene_synonym=SC5F8.28c;locus_tag=SCO7318
NC_003888.3	RefSeq	CDS	8123089	8125347	.	-	0	ID=cds7249;Parent=gene7381;Dbxref=Genbank:NP_631373.1,GeneID:1102756;Name=NP_631373.1;Note=SC5F8.28c%2C possible membrane protein%2C len: 752 aa%3B similar to TR:Q9AJZ2 (EMBL:AL512944) Streptomyces coelicolor  integral membrane protein SC8D11.27c%2C 753 aa%3B fasta scores: opt: 773 Z-score: 794.0 E(): 1.4e-36%3B 37.281%25 identity in 743 aa overlap. Contains multiple possible membrane spanning hydrophobic domains. Note the predicted product of this CDS is rich in the amino acid Leucine;gbkey=CDS;gene=SC5F8.28c;product=hypothetical protein;protein_id=NP_631373.1;transl_table=11
NC_003888.3	RefSeq	gene	8125470	8126915	.	-	.	ID=gene7382;Dbxref=GeneID:1102757;Name=SC5F8.29c;gbkey=Gene;gene=SC5F8.29c;gene_biotype=protein_coding;gene_synonym=SC5F8.29c;locus_tag=SCO7319
NC_003888.3	RefSeq	CDS	8125470	8126915	.	-	0	ID=cds7250;Parent=gene7382;Dbxref=Genbank:NP_631374.1,GeneID:1102757;Name=NP_631374.1;Note=SC5F8.29c%2C possible oxidoreductase%2C len: 481 aa. Similar to many dehydrogenases including: Escherichia coli SW:DHNA_ECOLI(EMBL:V00306) NADH dehydrogenase (EC 1.6.99.3) (433 aa)%2C fasta scores opt: 438 z-score: 509.8 E(): 6.4e-21 26.3%25 identity in 384 aa overlap and Streptomyces coelicolor TR:Q9ZC17(EMBL:AL033505) dehydrogenase%2C SC1E6.05 (629 aa)%2C fasta scores opt: 1148 z-score: 1329.8 E(): 0 44.3%25 identity in 420 aa overlap. Contains a Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase. Note codon 27 may offer an alternative translational start site.;gbkey=CDS;gene=SC5F8.29c;product=oxidoreductase;protein_id=NP_631374.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8125923	8126822	.	-	.	ID=id9461;Dbxref=GeneID:1102757;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 79.20%2C E-value 1.3e-22;gbkey=misc_feature;gene=SC5F8.29c
NC_003888.3	RefSeq	gene	8127055	8128797	.	-	.	ID=gene7383;Dbxref=GeneID:1102758;Name=SC5F8.30c;gbkey=Gene;gene=SC5F8.30c;gene_biotype=protein_coding;gene_synonym=SC5F8.30c;locus_tag=SCO7320
NC_003888.3	RefSeq	CDS	8127055	8128797	.	-	0	ID=cds7251;Parent=gene7383;Dbxref=Genbank:NP_631375.1,GeneID:1102758;Name=NP_631375.1;Note=SC5F8.30c%2C unknown%2C len: 580 aa. Similar in parts to many Streptomyces coelicolor proteins of undefined function including: TR:Q9RJE1(EMBL:AL133171) regulatory protein%2C SCF81.10C (828 aa)%2C fasta scores opt: 676 z-score: 710.0 E(): 4.5e-32 34.7%25 identity in 426 aa overlap and TR:Q9X8W1(EMBL:AL078610%3B) hypothetical 66.2 kd protein%2C SCH35.45C (634 aa)%2C fasta scores opt: 633 z-score: 666.6 E(): 1.2e-29 33.4%25 identity in 539 aa overlap.;gbkey=CDS;gene=SC5F8.30c;product=hypothetical protein;protein_id=NP_631375.1;transl_table=11
NC_003888.3	RefSeq	gene	8128794	8129858	.	-	.	ID=gene7384;Dbxref=GeneID:1102759;Name=SC5F8.31c;gbkey=Gene;gene=SC5F8.31c;gene_biotype=protein_coding;gene_synonym=SC5F8.31c;locus_tag=SCO7321
NC_003888.3	RefSeq	CDS	8128794	8129858	.	-	0	ID=cds7252;Parent=gene7384;Dbxref=Genbank:NP_631376.1,GeneID:1102759;Name=NP_631376.1;Note=SC5F8.31c%2C unknown%2C len: 354 aa. Similar to Deinococcus radiodurans TR:Q9RZT6(EMBL:AE001826) hypothetical TorS-related protein (351 aa)%2C fasta scores opt: 393 z-score: 443.7 E(): 3e-17 34.7%25 identity in 354 aa overlap.;gbkey=CDS;gene=SC5F8.31c;product=hypothetical protein;protein_id=NP_631376.1;transl_table=11
NC_003888.3	RefSeq	gene	8129858	8130298	.	-	.	ID=gene7385;Dbxref=GeneID:1102760;Name=SC4G10.01c;gbkey=Gene;gene=SC4G10.01c;gene_biotype=protein_coding;gene_synonym=SC4G10.01c,SC5F8.32c;locus_tag=SCO7322
NC_003888.3	RefSeq	CDS	8129858	8130298	.	-	0	ID=cds7253;Parent=gene7385;Dbxref=Genbank:NP_733729.1,GeneID:1102760;Name=NP_733729.1;Note=SC4G10.01c%2C possible anti-sigma factor%2C partial CDS%2C len: >57 aa. Highly similar to several including: Bacillus subtilis SW:RSBT_BACSU (EMBL:L35574) anti-sigma B factor controlling SigB the general stress sigma factor (133 aa)%2C fasta scores opt: 144 z-score: 235.0 E(): 1.3e-05 48.0%25 identity in 50 aa overlap and Deinococcus radiodurans TR:AAF12580(EMBL:AE001826) sigma-B regulator%2C RsbT (137 aa)%2C fasta scores opt: 201 z-score: 321.3 E(): 2e-10 63.2%25 identity in 57 aa overlap.~SC5F8.32c%2C possible anti-sigma factor%2C partial CDS%2C len: >129 aa. Highly similar to several anti-sigma factors including: Bacillus subtilis SW:RSBT_BACSU(EMBL:) anti-sigma B factor%2C RsbT (133 aa)%2C fasta scores opt: 452 z-score: 536.7 E(): 2e-22 57.6%25 identity in 118 aa overlap. Overlaps and extends into CDS SC4G10.01c on the adjoining cosmid.;gbkey=CDS;gene=SC4G10.01c;product=anti-sigma factor;protein_id=NP_733729.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8129864	8129868	.	-	.	ID=id9462;Dbxref=GeneID:1102760;gbkey=RBS;gene=SC4G10.01c
NC_003888.3	RefSeq	gene	8130298	8130729	.	-	.	ID=gene7386;Dbxref=GeneID:1102761;Name=SC4G10.02c;gbkey=Gene;gene=SC4G10.02c;gene_biotype=protein_coding;gene_synonym=SC4G10.02c;locus_tag=SCO7323
NC_003888.3	RefSeq	CDS	8130298	8130729	.	-	0	ID=cds7254;Parent=gene7386;Dbxref=Genbank:NP_631377.1,GeneID:1102761;Name=NP_631377.1;Note=SC4G10.02c%2C anti-sigma factor antagonist%2C len: 143 aa. Highly similar to many anti-anti sigma factors e.g. Bacillus subtilis SW:RSBS_BACSU (EMBL:L35574) anti-sigma factor antagonist%2C RsbS (121 aa)%2C fasta scores opt: 341 z-score: 417.5 E(): 8.5e-16 43.4%25 identity in 113 aa overlap. Contains a Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family.;gbkey=CDS;gene=SC4G10.02c;product=anti-sigma factor antagonist;protein_id=NP_631377.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8130307	8130311	.	-	.	ID=id9463;Dbxref=GeneID:1102761;gbkey=RBS;gene=SC4G10.02c
NC_003888.3	RefSeq	sequence_feature	8130364	8130684	.	-	.	ID=id9464;Dbxref=GeneID:1102761;Note=Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family%2C score 18.60%2C E-value 0.00021;gbkey=misc_feature;gene=SC4G10.02c
NC_003888.3	RefSeq	gene	8130726	8131625	.	-	.	ID=gene7387;Dbxref=GeneID:1102762;Name=SC4G10.03c;gbkey=Gene;gene=SC4G10.03c;gene_biotype=protein_coding;gene_synonym=SC4G10.03c;locus_tag=SCO7324
NC_003888.3	RefSeq	CDS	8130726	8131625	.	-	0	ID=cds7255;Parent=gene7387;Dbxref=Genbank:NP_631378.1,GeneID:1102762;Name=NP_631378.1;Note=SC4G10.03c%2C possible regulatory protein%2C len: 299 aa. Similar to Bacillus subtilis SW:RSBR_BACSU(EMBL:L35574) positive regulator of sigma-B activity%2C RsbR (274 aa)%2C fasta scores opt: 401 z-score: 450.7 E(): 1.2e-17 27.6%25 identity in 279 aa overlap.;gbkey=CDS;gene=SC4G10.03c;product=regulatory protein;protein_id=NP_631378.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8131634	8131638	.	-	.	ID=id9465;gbkey=RBS
NC_003888.3	RefSeq	gene	8131786	8132178	.	-	.	ID=gene7388;Dbxref=GeneID:1102763;Name=SC4G10.04c;gbkey=Gene;gene=SC4G10.04c;gene_biotype=protein_coding;gene_synonym=SC4G10.04c;locus_tag=SCO7325
NC_003888.3	RefSeq	CDS	8131786	8132178	.	-	0	ID=cds7256;Parent=gene7388;Dbxref=Genbank:NP_631379.1,GeneID:1102763;Name=NP_631379.1;Note=SC4G10.04c%2C anti-sigma factor antagonist%2C len: 130 aa. Similar to many including: Bacillus licheniformis SW:SP21_BACLI (EMBL:M25260) anti-sigma F factor antagonist (stage II sporulation protein AA) (117 aa)%2C fasta scores opt: 187 z-score: 252.1 E(): 1.4e-06 28.4%25 identity in 109 aa overlap and Streptomyces coelicolor SW:RSBV_STRCO (EMBL:AF134889) anti-sigma factor antagonist%2C BldG (113 aa)%2C fasta scores opt: 196 z-score: 263.7 E(): 3.2e-07 26.5%25 identity in 102 aa overlap. Contains a Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family.;gbkey=CDS;gene=SC4G10.04c;product=anti-sigma factor antagonist;protein_id=NP_631379.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8131837	8132154	.	-	.	ID=id9466;Dbxref=GeneID:1102763;Note=Pfam match to entry PF01740 SpoIIAA%2C SpoIIAA family%2C score 72.50%2C E-value 8.6e-18;gbkey=misc_feature;gene=SC4G10.04c
NC_003888.3	RefSeq	gene	8132296	8134770	.	-	.	ID=gene7389;Dbxref=GeneID:1102764;Name=SC4G10.05c;gbkey=Gene;gene=SC4G10.05c;gene_biotype=protein_coding;gene_synonym=SC4G10.05c;locus_tag=SCO7326
NC_003888.3	RefSeq	CDS	8132296	8134770	.	-	0	ID=cds7257;Parent=gene7389;Dbxref=Genbank:NP_631380.1,GeneID:1102764;Name=NP_631380.1;Note=SC4G10.05c%2C unknown%2C len: 824 aa. Similar to several Streptomyces coelicolor proteins of undefined function e.g. TR:CAB61192(EMBL:AL132973) SCF91.35 (884 aa)%2C fasta scores opt: 385 z-score: 407.5 E(): 3.1e-15 26.1%25 identity in 885 aa overlap;gbkey=CDS;gene=SC4G10.05c;product=hypothetical protein;protein_id=NP_631380.1;transl_table=11
NC_003888.3	RefSeq	gene	8134767	8138762	.	-	.	ID=gene7390;Dbxref=GeneID:1102765;Name=SC4G10.06c;gbkey=Gene;gene=SC4G10.06c;gene_biotype=protein_coding;gene_synonym=SC4G10.06c;locus_tag=SCO7327
NC_003888.3	RefSeq	CDS	8134767	8138762	.	-	0	ID=cds7258;Parent=gene7390;Dbxref=Genbank:NP_631381.1,GeneID:1102765;Name=NP_631381.1;Note=SC4G10.06c%2C possible two-component system sensory histidine kinase%2C len: 1331 aa. Highly similar in parts to many including: Pseudomonas syringae (pv. syringae) SW:LEMA_PSESY(EMBL:M80477) sensor protein%2C LemA (EC 2.7.3.-)%2C (907 aa)%2C fasta scores opt: 641 z-score: 627.6 E(): 1.7e-27 31.2%25 identity in 872 aa overlap and Streptomyces coelicolor TR:O86808(EMBL:AL031031) sensory histidine kinase%2C SC7C7.03 (1829 aa)%2C fasta scores opt: 2600 z-score: 2540.8 E():0 59.1%25 identity in 1346 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain%2C PF00512 signal%2C Histidine kinase and Pfam match to entry PF01590 GAF%2C GAF domain. Contains a 5x degenerate repeat region between residues 55..493 and a possible coiled-coil between residues 701..756.;gbkey=CDS;gene=SC4G10.06c;product=two-component system sensory histidine kinase;protein_id=NP_631381.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8134788	8135132	.	-	.	ID=id9467;Dbxref=GeneID:1102765;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 117.60%2C E-value 2.3e-31;gbkey=misc_feature;gene=SC4G10.06c
NC_003888.3	RefSeq	sequence_feature	8135751	8136428	.	-	.	ID=id9468;Dbxref=GeneID:1102765;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 211.30%2C E-value 1.4e-59;gbkey=misc_feature;gene=SC4G10.06c
NC_003888.3	RefSeq	sequence_feature	8136684	8137121	.	-	.	ID=id9469;Dbxref=GeneID:1102765;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 58.20%2C E-value 1.8e-13;gbkey=misc_feature;gene=SC4G10.06c
NC_003888.3	RefSeq	repeat_region	8137284	8138600	.	-	.	ID=id9470;Dbxref=GeneID:1102765;Note=repeat region containing 5x degenerate repeats.;gbkey=repeat_region;gene=SC4G10.06c
NC_003888.3	RefSeq	gene	8139033	8139467	.	-	.	ID=gene7391;Dbxref=GeneID:1102766;Name=SC4G10.07c;gbkey=Gene;gene=SC4G10.07c;gene_biotype=protein_coding;gene_synonym=SC4G10.07c;locus_tag=SCO7328
NC_003888.3	RefSeq	CDS	8139033	8139467	.	-	0	ID=cds7259;Parent=gene7391;Dbxref=Genbank:NP_631382.1,GeneID:1102766;Name=NP_631382.1;Note=SC4G10.07c%2C possible regulatory protein%2C len: 144 aa. Highly similar to Streptomyces fradiae TR:Q9Z9I5 (EMBL:AB024056) beta-lactamase regulator protein (139 aa)%2C fasta scores opt: 530 z-score: 661.7 E(): 2.2e-29 61.5%25 identity in 122 aa overlap and Streptomyces coelicolor TR:Q9X7S3 (EMBL:AL049863) regulator protein%2C SC5H1.15C (151 aa)%2C fasta scores opt: 178 z-score: 231.0 E(): 2.1e-05 30.8%25 identity in 130 aa overlap.;gbkey=CDS;gene=SC4G10.07c;product=regulatory protein;protein_id=NP_631382.1;transl_table=11
NC_003888.3	RefSeq	gene	8139603	8141513	.	-	.	ID=gene7392;Dbxref=GeneID:1102767;Name=SC4G10.08c;gbkey=Gene;gene=SC4G10.08c;gene_biotype=protein_coding;gene_synonym=SC4G10.08c;locus_tag=SCO7329
NC_003888.3	RefSeq	CDS	8139603	8141513	.	-	0	ID=cds7260;Parent=gene7392;Dbxref=Genbank:NP_631383.1,GeneID:1102767;Name=NP_631383.1;Note=SC4G10.08c%2C possible long-chain-fatty-acid-CoA ligase%2C len: 636 aa. Highly similar to many proposed long-chain-fatty-acid-CoA ligases including: Homo sapiens SW:LCFB_HUMAN(EMBL:D10040) long-chain-fatty-acid--CoA ligase 2 (EC 6.2.1.3) (698 aa)%2C fasta scores opt: 447 z-score: 498.5 E(): 2.6e-20 26.3%25 identity in 616 aa overlap and several from Streptomyces coelicolor e.g. TR:Q9ZBW6(EMBL:AL034443) SC4B5.02C (608 aa)%2C fasta scores opt: 1881 z-score: 2101.5 E(): 0 47.0%25 identity in 611 aa overlap. Contains a Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme.;gbkey=CDS;gene=SC4G10.08c;product=long-chain-fatty-acid-CoA ligase;protein_id=NP_631383.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8140002	8141366	.	-	.	ID=id9471;Dbxref=GeneID:1102767;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score -82.50%2C E-value 8.2e-11;gbkey=misc_feature;gene=SC4G10.08c
NC_003888.3	RefSeq	ribosome_entry_site	8141521	8141525	.	-	.	ID=id9472;gbkey=RBS
NC_003888.3	RefSeq	gene	8141668	8141904	.	+	.	ID=gene7393;Dbxref=GeneID:1102768;Name=SC4G10.09;gbkey=Gene;gene=SC4G10.09;gene_biotype=protein_coding;gene_synonym=SC4G10.09;locus_tag=SCO7330
NC_003888.3	RefSeq	CDS	8141668	8141904	.	+	0	ID=cds7261;Parent=gene7393;Dbxref=Genbank:NP_631384.1,GeneID:1102768;Name=NP_631384.1;Note=SC4G10.09%2C possible membrane protein%2C len: 78 aa. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC4G10.09;product=hypothetical protein;protein_id=NP_631384.1;transl_table=11
NC_003888.3	RefSeq	gene	8141930	8143021	.	-	.	ID=gene7394;Dbxref=GeneID:1102769;Name=SC4G10.10c;gbkey=Gene;gene=SC4G10.10c;gene_biotype=protein_coding;gene_synonym=SC4G10.10c;locus_tag=SCO7331
NC_003888.3	RefSeq	CDS	8141930	8143021	.	-	0	ID=cds7262;Parent=gene7394;Dbxref=Genbank:NP_631385.1,GeneID:1102769;Name=NP_631385.1;Note=ATP-dependent carboxylate-amine ligase;gbkey=CDS;gene=SC4G10.10c;product=carboxylate-amine ligase;protein_id=NP_631385.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8142629	8145790	.	-	.	ID=id9473;Note=shares 99%25 sequence identity over 3162 bases with (EMBL:X73903) S.coelicolor glgBII gene.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8143094	8145319	.	-	.	ID=gene7395;Dbxref=GeneID:1102770;Name=glgBII;gbkey=Gene;gene=glgBII;gene_biotype=protein_coding;gene_synonym=glgBII;locus_tag=SCO7332
NC_003888.3	RefSeq	CDS	8143094	8145319	.	-	0	ID=cds7263;Parent=gene7395;Dbxref=Genbank:NP_631386.1,GeneID:1102770;Name=NP_631386.1;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain;gbkey=CDS;gene=glgBII;product=1%2C4-alpha-glucan-branching protein;protein_id=NP_631386.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8143283	8144524	.	-	.	ID=id9474;Dbxref=GeneID:1102770;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score -42.30%2C E-value 2.8e-05;gbkey=misc_feature;gene=glgBII
NC_003888.3	RefSeq	sequence_feature	8145028	8154214	.	-	.	ID=id9475;Note=shares 99.86 %25 sequence identity over 9187 bases with Streptomyces coelicolor A3(2)(EMBL:AJ001206) glycogen metabolism cluster II;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8145323	8146684	.	-	.	ID=gene7396;Dbxref=GeneID:1102771;Name=pep2B;gbkey=Gene;gene=pep2B;gene_biotype=protein_coding;gene_synonym=pep2B,SC4G10.12c;locus_tag=SCO7333
NC_003888.3	RefSeq	CDS	8145323	8146684	.	-	0	ID=cds7264;Parent=gene7396;Dbxref=Genbank:NP_631387.1,GeneID:1102771;Name=NP_631387.1;gbkey=CDS;gene=pep2B;product=hypothetical protein;protein_id=NP_631387.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8145328	8145332	.	-	.	ID=id9476;Dbxref=GeneID:1102771;gbkey=RBS;gene=pep2B
NC_003888.3	RefSeq	gene	8146713	8148431	.	-	.	ID=gene7397;Dbxref=GeneID:1102772;Name=SC4G10.13c;gbkey=Gene;gene=SC4G10.13c;gene_biotype=protein_coding;gene_synonym=SC4G10.13c;locus_tag=SCO7334
NC_003888.3	RefSeq	CDS	8146713	8148431	.	-	0	ID=cds7265;Parent=gene7397;Dbxref=Genbank:NP_631388.1,GeneID:1102772;Name=NP_631388.1;gbkey=CDS;gene=SC4G10.13c;product=trehalose synthase;protein_id=NP_631388.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8146842	8146877	.	-	.	ID=id9477;Dbxref=GeneID:1102772;Note=PS01034 Glycosyl hydrolases family 16 active sites;gbkey=misc_feature;gene=SC4G10.13c
NC_003888.3	RefSeq	sequence_feature	8147001	8148350	.	-	.	ID=id9478;Dbxref=GeneID:1102772;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 274.00%2C E-value 2e-78;gbkey=misc_feature;gene=SC4G10.13c
NC_003888.3	RefSeq	gene	8148428	8150437	.	-	.	ID=gene7398;Dbxref=GeneID:1102773;Name=pep1B;gbkey=Gene;gene=pep1B;gene_biotype=protein_coding;gene_synonym=pep1B;locus_tag=SCO7335
NC_003888.3	RefSeq	CDS	8148428	8150437	.	-	0	ID=cds7266;Parent=gene7398;Dbxref=Genbank:NP_631389.1,GeneID:1102773;Name=NP_631389.1;Note=SC4G10.14c%2C pep1B%2C possible alpha-amylase%2C len: 669 aa. Previously sequenced region: Streptomyces coelicolor TR:O70012(EMBL:AJ001206) alpha amylase family protein%2C Pep1 (669 aa). Highly similar to Streptomyces coelicolor TR:CAB72419(EMBL:AL138978) alpha-amylase%2C Pep1A or SC6A11.19C (675 aa)%2C fasta scores opt: 4023 z-score: 4488.3 E(): 0 88.4%25 identity in 658 aa overlap. Contains a Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase.;gbkey=CDS;gene=pep1B;product=alpha-amylase;protein_id=NP_631389.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8148436	8148440	.	-	.	ID=id9479;Dbxref=GeneID:1102773;gbkey=RBS;gene=pep1B
NC_003888.3	RefSeq	sequence_feature	8148599	8149828	.	-	.	ID=id9480;Dbxref=GeneID:1102773;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score -82.10%2C E-value 0.0018;gbkey=misc_feature;gene=pep1B
NC_003888.3	RefSeq	ribosome_entry_site	8150439	8150446	.	-	.	ID=id9481;gbkey=RBS
NC_003888.3	RefSeq	gene	8150499	8150771	.	-	.	ID=gene7399;Dbxref=GeneID:1102774;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;gene_synonym=pepA,SC4G10.15c;locus_tag=SCO7336
NC_003888.3	RefSeq	CDS	8150499	8150771	.	-	0	ID=cds7267;Parent=gene7399;Dbxref=Genbank:NP_631390.1,GeneID:1102774;Name=NP_631390.1;Note=SC4G10.15c%2C pepA%2C unknown%2C len: 90 aa. Previously sequenced region: Streptomyces coelicolor TR:O54206(EMBL:AJ001206) hypothetical protein%2C PepA (90 aa).;gbkey=CDS;gene=pepA;product=hypothetical protein;protein_id=NP_631390.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8151051	8151055	.	+	.	ID=id9482;gbkey=RBS
NC_003888.3	RefSeq	gene	8151064	8151579	.	+	.	ID=gene7400;Dbxref=GeneID:1102775;Name=pepA2;gbkey=Gene;gene=pepA2;gene_biotype=protein_coding;gene_synonym=pepA2,SC4G10.16;locus_tag=SCO7337
NC_003888.3	RefSeq	CDS	8151064	8151579	.	+	0	ID=cds7268;Parent=gene7400;Dbxref=Genbank:NP_631391.1,GeneID:1102775;Name=NP_631391.1;Note=SC4G10.16%2C pepA2%2C unknown%2C len: 171 aa. Previously sequenced region: Streptomyces coelicolor TR:O54205(EMBL:AJ001206) hypothetical protein%2C PepA2 (171 aa).;gbkey=CDS;gene=pepA2;product=hypothetical protein;protein_id=NP_631391.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8151566	8151571	.	+	.	ID=id9483;Dbxref=GeneID:1102775;gbkey=RBS;gene=pepA2
NC_003888.3	RefSeq	gene	8151576	8153723	.	+	.	ID=gene7401;Dbxref=GeneID:1102776;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;gene_synonym=glgX;locus_tag=SCO7338
NC_003888.3	RefSeq	CDS	8151576	8153723	.	+	0	ID=cds7269;Parent=gene7401;Dbxref=Genbank:NP_631392.1,GeneID:1102776;Name=NP_631392.1;Note=SC4G10.17%2C glgX%2C possible glycogen debranching enzyme%2C len: 715 aa. Previously sequenced region: Streptomyces coelicolor TR:Q9X947(EMBL:AJ001206) (715 aa). Highly similar to Escherichia coli SW:GLGX_ECOLI(EMBL:J01616) glycogen operon protein%2C GlgX (EC 3.2.1.-) (657 aa)%2C fasta scores opt: 1948 z-score: 2333.6 E():0 47.5%25 identity in 673 aa overlap and Streptomyces coelicolor TR:CAB76010(EMBL:AL157916)  glycosyl hydrolase%2C GlgX2 or SC3D11.13c (782 aa)%2C fasta scores opt: 2622 z-score: 3141.4 E(): 0 58.5%25 identity in 725 aa overlap. Contains a Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase.;gbkey=CDS;gene=glgX;product=glycogen debranching protein;protein_id=NP_631392.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8152059	8153402	.	+	.	ID=id9484;Dbxref=GeneID:1102776;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C score 31.60%2C E-value 1.1e-08;gbkey=misc_feature;gene=glgX
NC_003888.3	RefSeq	gene	8153726	8154562	.	-	.	ID=gene7402;Dbxref=GeneID:1102777;Name=SC4G10.18c;gbkey=Gene;gene=SC4G10.18c;gene_biotype=protein_coding;gene_synonym=SC4G10.18c;locus_tag=SCO7339
NC_003888.3	RefSeq	CDS	8153726	8154562	.	-	0	ID=cds7270;Parent=gene7402;Dbxref=Genbank:NP_631393.1,GeneID:1102777;Name=NP_631393.1;Note=SC410.18c%2C unknown%2C len: 278 aa. Partially sequenced previously: Streptomyces coelicolor TR:Q9X946(EMBL:AJ001206) hypothetical 17.2 kd protein (>161 aa). Also highly similar to Streptomyces griseus TR:P95754(EMBL:D89734) SgaA protein%2C a suppressor of growth disturbance in the presence of high osmolarity and high concentrations of A-factor (264 aa)%2C fasta scores opt: 807 z-score: 948.0 E():0 52.0%25 identity in 250 aa overlap.;gbkey=CDS;gene=SC4G10.18c;product=hypothetical protein;protein_id=NP_631393.1;transl_table=11
NC_003888.3	RefSeq	gene	8154652	8155017	.	+	.	ID=gene7403;Dbxref=GeneID:1102778;Name=SC4G10.19;gbkey=Gene;gene=SC4G10.19;gene_biotype=protein_coding;gene_synonym=SC4G10.19;locus_tag=SCO7340
NC_003888.3	RefSeq	CDS	8154652	8155017	.	+	0	ID=cds7271;Parent=gene7403;Dbxref=Genbank:NP_631394.1,GeneID:1102778;Name=NP_631394.1;Note=SC410.19%2C unknown%2C len: 121 aa. Similar to Streptomyces coelicolor TR:Q9S1U3(EMBL:AL109950) hypothetical 11.6 kd protein%2C SCJ4.30 (107 aa)%2C fasta scores opt: 285 z-score: 344.7 E(): 9.8e-12 54.3%25 identity in 92 aa overlap.;gbkey=CDS;gene=SC4G10.19;product=hypothetical protein;protein_id=NP_631394.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8154704	8156713	.	-	.	ID=id9485;Note=shares 99.86%25 sequence identity over 2010 bases with Streptomyces coelicolor (EMBL:AF036131) RNA polymerase secondary sigma factor (sigG) gene%2C complete cds.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8154965	8155756	.	-	.	ID=gene7404;Dbxref=GeneID:1102779;Name=SC4G10.20c;gbkey=Gene;gene=SC4G10.20c;gene_biotype=protein_coding;gene_synonym=SC4G10.20c,sigG;locus_tag=SCO7341
NC_003888.3	RefSeq	CDS	8154965	8155756	.	-	0	ID=cds7272;Parent=gene7404;Dbxref=Genbank:NP_631395.1,GeneID:1102779;Name=NP_631395.1;Note=SC4G10.20c%2C sigG%2C possible RNA polymerase secondary sigma factor%2C len: 263 aa. Previously sequenced region: Streptomyces coelicolor TR:O52313 (EMBL:AF036131) (263 aa). Highly similar to Streptomyces coelicolor SW:RPOF_STRCO (EMBL:L11648) RNA polymerase sigma-F factor (287 aa)%2C fasta scores opt: 682 z-score: 820.1 E(): 0 49.2%25 identity in 240 aa overlap. Contains a Prosite hit to PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2 and a Pfam match to entry PF00140 sigma70%2C Sigma-70 factor. A possible helix-turn-helix motif situated between residues 227..248 (+6.87 SD).;gbkey=CDS;gene=SC4G10.20c;product=RNA polymerase secondary sigma factor;protein_id=NP_631395.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8154989	8155654	.	-	.	ID=id9486;Dbxref=GeneID:1102779;Note=Pfam match to entry PF00140 sigma70%2C Sigma-70 factor%2C score 200.50%2C E-value 2.6e-56;gbkey=misc_feature;gene=SC4G10.20c
NC_003888.3	RefSeq	sequence_feature	8155673	8155702	.	-	.	ID=id9487;Dbxref=GeneID:1102779;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2;gbkey=misc_feature;gene=SC4G10.20c
NC_003888.3	RefSeq	ribosome_entry_site	8155763	8155769	.	-	.	ID=id9488;gbkey=RBS
NC_003888.3	RefSeq	gene	8156060	8156584	.	+	.	ID=gene7405;Dbxref=GeneID:1102780;Name=SC4G10.21;gbkey=Gene;gene=SC4G10.21;gene_biotype=protein_coding;gene_synonym=SC4G10.21;locus_tag=SCO7342
NC_003888.3	RefSeq	CDS	8156060	8156584	.	+	0	ID=cds7273;Parent=gene7405;Dbxref=Genbank:NP_631396.1,GeneID:1102780;Name=NP_631396.1;Note=SC410.21%2C unknown%2C len: 174 aa. Previously sequenced region: Streptomyces coelicolor TR:O52312(EMBL:AF036131) (174 aa).;gbkey=CDS;gene=SC4G10.21;product=hypothetical protein;protein_id=NP_631396.1;transl_table=11
NC_003888.3	RefSeq	gene	8156604	8157545	.	-	.	ID=gene7406;Dbxref=GeneID:1102781;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;gene_synonym=hemC;locus_tag=SCO7343
NC_003888.3	RefSeq	CDS	8156604	8157545	.	-	0	ID=cds7274;Parent=gene7406;Dbxref=Genbank:NP_631397.1,GeneID:1102781;Name=NP_631397.1;Note=SC4G10.22c%2C hemC%2C porphobilinogen deaminase (EC 4.3.1.8). len: 313 aa. Highly similar to many e.g. Escherichia coli SW:HEM3_ECOLI(EMBL:X04242) porphobilinogen deaminase (EC 4.3.1.8) (313 aa)%2C fasta scores opt: 710 z-score: 839.8 E(): 0 42.2%25 identity in 303 aa overlap. Contains a Pfam match to entry PF01379 Porphobil_deam%2C Porphobilinogen deaminase.;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=NP_631397.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8156643	8157521	.	-	.	ID=id9489;Dbxref=GeneID:1102781;Note=Pfam match to entry PF01379 Porphobil_deam%2C Porphobilinogen deaminase%2C score 301.00%2C E-value 1.5e-86;gbkey=misc_feature;gene=hemC
NC_003888.3	RefSeq	gene	8157613	8158389	.	-	.	ID=gene7407;Dbxref=GeneID:1102782;Name=SC4G10.23c;gbkey=Gene;gene=SC4G10.23c;gene_biotype=protein_coding;gene_synonym=SC4G10.23c;locus_tag=SCO7344
NC_003888.3	RefSeq	CDS	8157613	8158389	.	-	0	ID=cds7275;Parent=gene7407;Dbxref=Genbank:NP_631398.1,GeneID:1102782;Name=NP_631398.1;Note=SC4G10.23c%2C possible hypothetical protein%2C len: 258 aa. Weakly similar to the Eukaryotic protein elicitor from Pythium aphanidermatum TR:Q9SPD4(EMBL:AF179598) 25 kda protein elicitor (234 aa)%2C fasta scores opt: 279 z-score: 316.6 E(): 3.6e-10 31.0%25 identity in 242 aa overlap. Contains a possible N-terminal signal sequence;gbkey=CDS;gene=SC4G10.23c;product=hypothetical protein;protein_id=NP_631398.1;transl_table=11
NC_003888.3	RefSeq	gene	8158531	8159511	.	-	.	ID=gene7408;Dbxref=GeneID:1102783;Name=SC4G10.24c;gbkey=Gene;gene=SC4G10.24c;gene_biotype=protein_coding;gene_synonym=SC4G10.24c;locus_tag=SCO7345
NC_003888.3	RefSeq	CDS	8158531	8159511	.	-	0	ID=cds7276;Parent=gene7408;Dbxref=Genbank:NP_631399.1,GeneID:1102783;Name=NP_631399.1;Note=SC4G10.24c%2C probable ATP-dependent DNA ligase%2C len: 326 aa. Similar in parts to many DNA ligases e.g. Pyrococcus horikoshii SW:DNLI_PYRHO(EMBL:AP000006) probable thermostable DNA ligase (EC 6.5.1.1) (559 aa)%2C fasta scores opt: 454 z-score: 506.0 E(): 1e-20 32.0%25 identity in 344 aa overlap. Contains a Prosite hit to PS00697 ATP-dependent DNA ligase AMP-binding site and a Pfam match to entry PF01068 DNA_ligase%2C DNA ligase.;gbkey=CDS;gene=SC4G10.24c;product=ATP-dependent DNA ligase;protein_id=NP_631399.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8158585	8159499	.	-	.	ID=id9490;Dbxref=GeneID:1102783;Note=Pfam match to entry PF01068 DNA_ligase%2C DNA ligase%2C score 118.70%2C E-value 1.1e-31;gbkey=misc_feature;gene=SC4G10.24c
NC_003888.3	RefSeq	sequence_feature	8159404	8159430	.	-	.	ID=id9491;Dbxref=GeneID:1102783;Note=PS00697 ATP-dependent DNA ligase AMP-binding site;gbkey=misc_feature;gene=SC4G10.24c
NC_003888.3	RefSeq	gene	8159608	8161062	.	-	.	ID=gene7409;Dbxref=GeneID:1102784;Name=SC4G10.25c;gbkey=Gene;gene=SC4G10.25c;gene_biotype=protein_coding;gene_synonym=SC4G10.25c;locus_tag=SCO7346
NC_003888.3	RefSeq	CDS	8159608	8161062	.	-	0	ID=cds7277;Parent=gene7409;Dbxref=Genbank:NP_631400.1,GeneID:1102784;Name=NP_631400.1;Note=SC4G10.25c%2C possible membrane transport protein%2C len: 484 aa. Highly similar to several including: Streptomyces glaucescens SW:TCMA_STRGA(EMBL:M80674) tetracenomycin C resistance and export protein%2C TcmA (528 aa)%2C fasta scores opt: 538 z-score: 582.2 E(): 5.8e-25 27.8%25 identity in 475 aa overlap and Streptomyces coelicolor TR:CAB88188(EMBL:AL352972) transport protein (fragment)%2C SCC30.18 (348 aa)%2C fasta scores opt: 1368 z-score: 1475.7 E():0 60.0%25 identity in 340 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter.;gbkey=CDS;gene=SC4G10.25c;product=membrane transport protein;protein_id=NP_631400.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8159677	8161026	.	-	.	ID=id9492;Dbxref=GeneID:1102784;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -76.40%2C E-value 0.00039;gbkey=misc_feature;gene=SC4G10.25c
NC_003888.3	RefSeq	gene	8161299	8161964	.	+	.	ID=gene7410;Dbxref=GeneID:1102785;Name=SC4G10.26.;gbkey=Gene;gene=SC4G10.26.;gene_biotype=protein_coding;gene_synonym=SC4G10.26.,SC9H11.01;locus_tag=SCO7347
NC_003888.3	RefSeq	CDS	8161299	8161964	.	+	0	ID=cds7278;Parent=gene7410;Dbxref=Genbank:NP_733730.1,GeneID:1102785;Name=NP_733730.1;Note=SC9H11.01%2C unknown%2C partial CDS%2C len: >201 aa.~SC410.26%2C unknown%2C partial CDS%2C len: >55 aa. Overlaps and extends into CDS SC9H11.01 on the adjoining cosmid.;gbkey=CDS;gene=SC4G10.26.;product=hypothetical protein;protein_id=NP_733730.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8162131	8162165	.	+	.	ID=id9493;Note=SC9H11 repeat unit 1 (RU1). Repeated three times on this cosmid (iterated at positions 965..999 and 1156..1190) with the consensus: GCTG(C/T)GAGGGGCGGCGCGGTGGGCCGGCCGGTCGA.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162166	8162172	.	+	.	ID=id9494;Note=SC9H11 repeat unit 2 (RU2). Repeated three times (alternate positions 1000..1006 and 1192..1198) with the consensus: AGCCCGT.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162173	8162185	.	+	.	ID=id9495;Note=SC9H11 repeat unit 3 (RU3). Repeated six times on this cosmid (iterated at positions 849..861%2C 1007..1019%2C 1040..1052%2C 1212..1224 and 1245..1257) with the consensus: CGCAC(T/G)TCGGCGT. This repeat differs only slightly from RU4.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162186	8162198	.	+	.	ID=id9496;Note=SC9H11 repeat unit 4 (RU4). Repeated four times on this cosmid (iterated at positions 1020..1032%2C 1199..1211 and 1225..1237) with the consensus: CGGACGTCGGCGT. This repeat differs only slightly from RU3.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162199	8162205	.	+	.	ID=id9497;Note=SC9H11 repeat unit 5 (RU5). Repeated three times on this cosmid (iterated at positions 1033..1039 and 1238..1244) with the consensus: TGCTCAC.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8162202	8162315	.	-	.	ID=gene7411;Dbxref=GeneID:1102786;Name=SC9H11.02c;gbkey=Gene;gene=SC9H11.02c;gene_biotype=protein_coding;gene_synonym=SC9H11.02c;locus_tag=SCO7348
NC_003888.3	RefSeq	CDS	8162202	8162315	.	-	0	ID=cds7279;Parent=gene7411;Dbxref=Genbank:NP_631401.1,GeneID:1102786;Name=NP_631401.1;Note=SC9H11.02c%2C doubtful CDS%2C len: 37 aa. Highly similar to predicted sequences encoded within repeat unit 7 on this cosmid: SC9H11.03c (37 aa)%2C fasta scores opt: 244 z-score: 268.5 E(): 2e-09 91.9%25 identity in 37 aa and the C-terminal 37 aa of SC9H11.04c (398 aa)%2C fasta scores opt: 225 z-score: 234.8 E(): 1.5e-07 91.9%25 identity in 37 aa overlap overlap.;gbkey=CDS;gene=SC9H11.02c;product=hypothetical protein;protein_id=NP_631401.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8162206	8162218	.	+	.	ID=id9498;Note=SC9H11 repeat unit 3 (RU3). Repeated six times on this cosmid (iterated at positions 816..828%2C 1007..1019%2C 1040..1052%2C 1212..1224 and 1245..1257) with the consensus: CGCAC(T/G)TCGGCGT. This repeat differs only slightly from RU4.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162219	8162227	.	+	.	ID=id9499;Note=SC9H11 repeat unit 6 (RU6). Repeated three times (iterated at positions 1053..1061 and 1258..1266) with the consensus: CG(T/C)GTG(C/T)CG.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162228	8162321	.	+	.	ID=id9500;Note=SC9H11 repeat unit 7 (RU7). Repeated three times on this cosmid (iterated at positions 1062..1155 and 1267..1359) with the consensus: TCCGTGACCCGAGGGC(G/A)GGCGGTG(C/T)CGGGGGCGGGGCCGGCTCGCGC (G/A)GGCCG(C/T)AC(T/A)GGAGCAGCCTGCCCACGGCGGGCAGCGCCACC (G/-)(C/A)(G/A)CG.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162322	8162356	.	+	.	ID=id9501;Note=SC9H11 repeat unit 1 (RU1). Repeated three times on this cosmid (iterated at positions 774..808 and 1156..1190) with the consensus: GCTG(C/T)GAGGGGCGGCGCGGTGGGCCGGCCGGTCGA.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162357	8162363	.	+	.	ID=id9502;Note=SC9H11 repeat unit 2 (RU2). Repeated three times (alternate positions 774..808 and 1192..1198) with the consensus: AGCCCGT.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162364	8162376	.	+	.	ID=id9503;Note=SC9H11 repeat unit 3 (RU3). Repeated six times on this cosmid (iterated at positions 816..828%2C 849..861%2C 1040..1052%2C 1212..1224 and 1245..1257) with the consensus: CGCAC(T/G)TCGGCGT. This repeat differs only slightly from RU4.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162377	8162389	.	+	.	ID=id9504;Note=SC9H11 repeat unit 4 (RU4). Repeated four times on this cosmid (iterated at positions 829..841%2C 1199..1211 and 1225..1237) with the consensus: CGGACGTCGGCGT. This repeat differs only slightly from RU3.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162390	8162396	.	+	.	ID=id9505;Note=SC9H11 repeat unit 5 (RU5). Repeated three times on this cosmid (iterated at positions 842..848 and 1238..1244) with the consensus: TGCTCAC.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8162393	8162506	.	-	.	ID=gene7412;Dbxref=GeneID:1102787;Name=SC9H11.03c;gbkey=Gene;gene=SC9H11.03c;gene_biotype=protein_coding;gene_synonym=SC9H11.03c;locus_tag=SCO7349
NC_003888.3	RefSeq	CDS	8162393	8162506	.	-	0	ID=cds7280;Parent=gene7412;Dbxref=Genbank:NP_631402.1,GeneID:1102787;Name=NP_631402.1;Note=SC9H11.03c%2C doubtful CDS%2C len: 37 aa. Highly similar to predicted sequences encoded within repeat unit 7 on this cosmid: SC9H11.02c (37 aa)%2C fasta scores opt: 244 z-score: 268.5 E(): 2e-09 91.9%25 identity in 37 aa and the C-terminal 37 aa of SC9H11.04c (398 aa)%2C fasta scores opt: 205 z-score: 222.0 E(): 7.9e-07 83.8%25 identity in 37 aa overlap.;gbkey=CDS;gene=SC9H11.03c;product=hypothetical protein;protein_id=NP_631402.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8162397	8162409	.	+	.	ID=id9506;Note=SC9H11 repeat unit 3 (RU3). Repeated six times on this cosmid (iterated at positions 816..828%2C 849..861%2C 1007..1019%2C 1212..1224 and 1245..1257) with the consensus: CGCAC(T/G)TCGGCGT. This repeat differs only slightly from RU4.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162410	8162418	.	+	.	ID=id9507;Note=SC9H11 repeat unit 6 (RU6). Repeated three times (iterated at positions 862..870 and 1258..1266) with the consensus: CG(T/C)GTG(C/T)CG.;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	8162419	8162512	.	+	.	ID=id9508;Note=SC9H11 repeat unit 7 (RU7). Repeated three times on this cosmid (iterated at positions 871..964 and 1267..1359) with the consensus: TCCGTGACCCGAGGGC(G/A)GGCGGTG(C/T)CGGGGGCGGGGCCGGCTCGCGC (G/A)GGCCG(C/T)AC(T/A)GGAGCAGCCTGCCCACGGCGGGCAGCGCCACC (G/-)(C/A)(G/A)CG.;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	8162513	8162547	.	+	.	ID=id9509;Note=SC9H11 repeat unit 1 (RU1). Repeated three times on this cosmid (iterated at positions 774..808 and 965..999) with the consensus: GCTG(C/T)GAGGGGCGGCGCGGTGGGCCGGCCGGTCGA.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162549	8162555	.	+	.	ID=id9510;Note=SC9H11 repeat unit 2 (RU2). Repeated three times (alternate positions 774..808 and 1000..1006) with the consensus: AGCCCGT.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162556	8162568	.	+	.	ID=id9511;Note=SC9H11 repeat unit 4 (RU4). Repeated four times on this cosmid (iterated at positions 829..841%2C 1020..1032 and 1225..1237) with the consensus: CGGACGTCGGCGT. This repeat differs only slightly from RU3.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162569	8162581	.	+	.	ID=id9512;Note=SC9H11 repeat unit 3 (RU3). Repeated six times on this cosmid (iterated at positions 816..828%2C 849..861%2C 1007..1019%2C 1040..1052 and 1245..1257) with the consensus: CGCAC(T/G)TCGGCGT. This repeat differs only slightly from RU4.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162582	8162594	.	+	.	ID=id9513;Note=SC9H11 repeat unit 4 (RU4). Repeated four times on this cosmid (iterated at positions 829..841%2C 1020..1032 and 1199..1211) with the consensus: CGGACGTCGGCGT. This repeat differs only slightly from RU3.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162595	8162601	.	+	.	ID=id9514;Note=SC9H11 repeat unit 5 (RU5). Repeated three times on this cosmid (iterated at positions 842..848 and 1033..1039 with the consensus: TGCTCAC.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8162598	8163794	.	-	.	ID=gene7413;Dbxref=GeneID:1102788;Name=SC9H11.04c;gbkey=Gene;gene=SC9H11.04c;gene_biotype=protein_coding;gene_synonym=SC9H11.04c;locus_tag=SCO7350
NC_003888.3	RefSeq	CDS	8162598	8163794	.	-	0	ID=cds7281;Parent=gene7413;Dbxref=Genbank:NP_631403.1,GeneID:1102788;Name=NP_631403.1;Note=SC9H11.04c%2C possible membrane efflux protein%2C len: 398 aa. Similar to many membrane efflux proteins including: Streptomyces lividans SW:CMLR_STRLI(EMBL:X59968) chloramphenicol resistance protein%2C CmlR (392 aa)%2C fasta scores opt: 227 z-score: 239.8 E(): 6.8e-06 27.7%25 identity in 411 aa overlap and Escherichia coli SW:FSR_ECOLI(EMBL:D73370) fosmidomycin resistance protein%2C FsR (406 aa)%2C fasta scores opt: 506 z-score: 524.2 E(): 9.8e-22 28.4%25 identity in 373 aa overlap. Contains multiple possible membrane spanning hydrophobic domains. Note that the C-terminal 37 aa of this protein are highly similar to CDS SC9H11.02c and SC9H11.03c.;gbkey=CDS;gene=SC9H11.04c;product=membrane efflux protein;protein_id=NP_631403.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8162602	8162614	.	+	.	ID=id9515;Note=SC9H11 repeat unit 3 (RU3). Repeated six times on this cosmid (iterated at positions 816..828%2C 849..861%2C 1007..1019%2C 1040..1052 and 1212..1224) with the consensus: CGCAC(T/G)TCGGCGT. This repeat differs only slightly from RU4.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162615	8162623	.	+	.	ID=id9516;Note=SC9H11 repeat unit 6 (RU6). Repeated three times (iterated at positions 862..870 and 1053..1061) with the consensus: CG(T/C)GTG(C/T)CG.;gbkey=repeat_region
NC_003888.3	RefSeq	repeat_region	8162624	8162716	.	+	.	ID=id9517;Note=SC9H11 repeat unit 7 (RU7). Repeated three times on this cosmid (iterated at positions 871..964 and 1062..1155) with the consensus: TCCGTGACCCGAGGGC(G/A)GGCGGTG(C/T)CGGGGGCGGGGCCGGCTCGCGC (G/A)GGCCG(C/T)AC(T/A)GGAGCAGCCTGCCCACGGCGGGCAGCGCCACC (G/-)(C/A)(G/A)CG.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8163849	8164718	.	+	.	ID=gene7414;Dbxref=GeneID:1102789;Name=SC9H11.05;gbkey=Gene;gene=SC9H11.05;gene_biotype=protein_coding;gene_synonym=SC9H11.05;locus_tag=SCO7351
NC_003888.3	RefSeq	CDS	8163849	8164718	.	+	0	ID=cds7282;Parent=gene7414;Dbxref=Genbank:NP_631404.1,GeneID:1102789;Name=NP_631404.1;Note=SC9H11.05%2C possible AraC-family transcriptional regulator%2C len: 289 aa. Similar to several including: Streptomyces coelicolor TR:O69819(EMBL:AL023496) transcriptional regulator%2C SC1A6.14 (256 aa)%2C fasta scores opt: 397 z-score: 464.2 E(): 2.2e-18 33.5%25 identity in 254 aa overlap and Escherichia coli SW:YEAM_ECOLI(EMBL:AE000274) hypothetical transcriptional regulator (273 aa)%2C fasta scores opt: 438 z-score: 510.8 E(): 5.4e-21 33.2%25 identity in 232 aa overlap. Contains a Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family with the helix-turn-helix motif situated between residues 194..215 (+4.88 SD). Contains a TTA /leucine codon which is a possible target for bldA regulation.;gbkey=CDS;gene=SC9H11.05;product=AraC family transcription regulator;protein_id=NP_631404.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8164353	8164355	.	+	.	ID=id9518;Dbxref=GeneID:1102789;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC9H11.05
NC_003888.3	RefSeq	sequence_feature	8164425	8164682	.	+	.	ID=id9519;Dbxref=GeneID:1102789;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 72.00%2C E-value 1.3e-17;gbkey=misc_feature;gene=SC9H11.05
NC_003888.3	RefSeq	ribosome_entry_site	8164741	8164746	.	+	.	ID=id9520;gbkey=RBS
NC_003888.3	RefSeq	gene	8164751	8165131	.	+	.	ID=gene7415;Dbxref=GeneID:1102790;Name=SC9H11.06;gbkey=Gene;gene=SC9H11.06;gene_biotype=protein_coding;gene_synonym=SC9H11.06;locus_tag=SCO7352
NC_003888.3	RefSeq	CDS	8164751	8165131	.	+	0	ID=cds7283;Parent=gene7415;Dbxref=Genbank:NP_631405.1,GeneID:1102790;Name=NP_631405.1;Note=SC9H11.06%2C possible membrane protein%2C len: 126 aa. Similar to several proteins of undefined function from Deinococcus radiodurans e.g. TR:AAF11579(EMBL:AE002039) hypothetical 13.2 kd protein (120 aa)%2C fasta scores opt: 304 z-score: 370.4 E(): 3.6e-13 48.2%25 identity in 112 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC9H11.06;product=hypothetical protein;protein_id=NP_631405.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8165118	8165121	.	+	.	ID=id9521;Dbxref=GeneID:1102790;gbkey=RBS;gene=SC9H11.06
NC_003888.3	RefSeq	gene	8165128	8165595	.	+	.	ID=gene7416;Dbxref=GeneID:1102791;Name=SC9H11.07;gbkey=Gene;gene=SC9H11.07;gene_biotype=protein_coding;gene_synonym=SC9H11.07;locus_tag=SCO7353
NC_003888.3	RefSeq	CDS	8165128	8165595	.	+	0	ID=cds7284;Parent=gene7416;Dbxref=Genbank:NP_631406.1,GeneID:1102791;Name=NP_631406.1;Note=SC9H11.07%2C unknown%2C len: 155 aa. Highly similar to many bacterioferritin comigratory proteins e.g. Mycobacterium tuberculosis TR:O53911(EMBL:AL02200) bacterioferritin comigratory protein%2C BcpB (154 aa)%2C fasta scores opt: 618 z-score: 761.9 E():0 63.8%25 identity in 149 aa overlap. Contains a Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family;gbkey=CDS;gene=SC9H11.07;product=hypothetical protein;protein_id=NP_631406.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8165146	8165568	.	+	.	ID=id9522;Dbxref=GeneID:1102791;Note=Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family%2C score 61.90%2C E-value 1.4e-14;gbkey=misc_feature;gene=SC9H11.07
NC_003888.3	RefSeq	gene	8165621	8168029	.	+	.	ID=gene7417;Dbxref=GeneID:1102792;Name=SC9H11.08;gbkey=Gene;gene=SC9H11.08;gene_biotype=protein_coding;gene_synonym=SC9H11.08;locus_tag=SCO7354
NC_003888.3	RefSeq	CDS	8165621	8168029	.	+	0	ID=cds7285;Parent=gene7417;Dbxref=Genbank:NP_631407.1,GeneID:1102792;Name=NP_631407.1;Note=SC9H11.08%2C unknown%2C len: 802 aa. Similar to many proteins of undefined function e.g. Streptomyces coelicolor TR:CAB61537(EMBL:AL133171) hypothetical 89.7 kd protein%2C SCF81.26 (835 aa)%2C fasta scores opt: 2446 z-score: 2641.1 E(): 0 53.0%25 identity in 800 aa overlap. Contains Pfam matches to 2xentry PF00989 PAS%2C PAS domain.;gbkey=CDS;gene=SC9H11.08;product=hypothetical protein;protein_id=NP_631407.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8165684	8165785	.	+	.	ID=id9523;Dbxref=GeneID:1102792;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 21.50%2C E-value 0.00025;gbkey=misc_feature;gene=SC9H11.08
NC_003888.3	RefSeq	sequence_feature	8165978	8166121	.	+	.	ID=id9524;Dbxref=GeneID:1102792;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 19.30%2C E-value 0.00098;gbkey=misc_feature;gene=SC9H11.08
NC_003888.3	RefSeq	gene	8168062	8168703	.	-	.	ID=gene7418;Dbxref=GeneID:1102793;Name=SC9H11.09c;gbkey=Gene;gene=SC9H11.09c;gene_biotype=protein_coding;gene_synonym=SC9H11.09c;locus_tag=SCO7355
NC_003888.3	RefSeq	CDS	8168062	8168703	.	-	0	ID=cds7286;Parent=gene7418;Dbxref=Genbank:NP_631408.1,GeneID:1102793;Name=NP_631408.1;Note=SC9H11.09c%2C unknown%2C len: 213 aa%3B similar to the N-terminal region of many ATP-dependent DNA ligases%2C e.g. TR:Q98J69 (EMBL:AP002998) Rhizobium loti (Mesorhizobium loti) probable ATP-dependent DNA ligase MLL2077%2C 833 aa%3B fasta scores:opt: 539 Z-score: 543.3 E(): 1.3e-22%3B 53.216%25 identity in 171 aa overlap;gbkey=CDS;gene=SC9H11.09c;product=hypothetical protein;protein_id=NP_631408.1;transl_table=11
NC_003888.3	RefSeq	gene	8168760	8169590	.	-	.	ID=gene7419;Dbxref=GeneID:1102794;Name=SC9H11.10c;gbkey=Gene;gene=SC9H11.10c;gene_biotype=protein_coding;gene_synonym=SC9H11.10c;locus_tag=SCO7356
NC_003888.3	RefSeq	CDS	8168760	8169590	.	-	0	ID=cds7287;Parent=gene7419;Dbxref=Genbank:NP_631409.1,GeneID:1102794;Name=NP_631409.1;Note=SC9H11.10c%2C oxidoreductase%2C len: 276 aa. Highly similar to many including: Corynebacterium sp. SW:2DKG_CORSP(EMBL:M21193) 2%2C5-diketo-d-gluconic acid reductase (EC 1.1.1.-) (277 aa)%2C fasta scores opt: 1006 z-score: 1188.8 E(): 0 52.9%25 identity in 274 aa overlap and Streptomyces coelicolor TR:Q9ZBW7(EMBL:AL034443%3B) oxidoreductase%2C SC4B5.01C (277 aa)%2C fasta scores opt: 1018 z-score: 1202.9 E():0 56.3%25 identity in 268 aa overlap. Contains Prosite hits to PS00063 Aldo/keto reductase family  active site signature%2C PS00062 Aldo/keto reductase family signature 2 and PS00798 Aldo/keto reductase family signature 1. Also contains a Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family.;gbkey=CDS;gene=SC9H11.10c;product=oxidoreductase;protein_id=NP_631409.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8168820	8169566	.	-	.	ID=id9525;Dbxref=GeneID:1102794;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 413.30%2C E-value 3.8e-121;gbkey=misc_feature;gene=SC9H11.10c
NC_003888.3	RefSeq	sequence_feature	8168856	8168903	.	-	.	ID=id9526;Dbxref=GeneID:1102794;Note=PS00063 Aldo/keto reductase family active site signature;gbkey=misc_feature;gene=SC9H11.10c
NC_003888.3	RefSeq	sequence_feature	8169165	8169218	.	-	.	ID=id9527;Dbxref=GeneID:1102794;Note=PS00062 Aldo/keto reductase family signature 2;gbkey=misc_feature;gene=SC9H11.10c
NC_003888.3	RefSeq	sequence_feature	8169417	8169470	.	-	.	ID=id9528;Dbxref=GeneID:1102794;Note=PS00798 Aldo/keto reductase family signature 1;gbkey=misc_feature;gene=SC9H11.10c
NC_003888.3	RefSeq	gene	8169703	8170689	.	+	.	ID=gene7420;Dbxref=GeneID:1102795;Name=SC9H11.11;gbkey=Gene;gene=SC9H11.11;gene_biotype=protein_coding;gene_synonym=SC9H11.11;locus_tag=SCO7357
NC_003888.3	RefSeq	CDS	8169703	8170689	.	+	0	ID=cds7288;Parent=gene7420;Dbxref=Genbank:NP_631410.1,GeneID:1102795;Name=NP_631410.1;Note=SC9H11.11%2C probable dioxygenase%2C len: 328 aa. Highly similar to many including: Escherichia coli SW:TAUD_ECOLI(EMBL:D85613) alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.-.-) (282 aa)%2C fasta scores opt: 462 z-score: 559.5 E(): 1.1e-23 35.0%25 identity in 294 aa overlap and Mycobacterium tuberculosis SW:YY06_MYCTU(EMBL:Z77165)  dioxygenase RV3406 (EC 1.-.-.-) (295 aa)%2C fasta scores opt: 523 z-score: 632.3 E(): 9.3e-28 41.6%25 identity in 308 aa overlap.;gbkey=CDS;gene=SC9H11.11;product=dioxygenase;protein_id=NP_631410.1;transl_table=11
NC_003888.3	RefSeq	gene	8170720	8172222	.	-	.	ID=gene7421;Dbxref=GeneID:1102796;Name=SC9H11.12c.;gbkey=Gene;gene=SC9H11.12c.;gene_biotype=protein_coding;gene_synonym=SC9H11.12c.;locus_tag=SCO7358
NC_003888.3	RefSeq	CDS	8170720	8172222	.	-	0	ID=cds7289;Parent=gene7421;Dbxref=Genbank:NP_631411.1,GeneID:1102796;Name=NP_631411.1;Note=SC9H11.12c%2C unknown%2C len: 500 aa.;gbkey=CDS;gene=SC9H11.12c.;product=hypothetical protein;protein_id=NP_631411.1;transl_table=11
NC_003888.3	RefSeq	gene	8172314	8173069	.	-	.	ID=gene7422;Dbxref=GeneID:1102797;Name=SC9H11.13c;gbkey=Gene;gene=SC9H11.13c;gene_biotype=protein_coding;gene_synonym=SC9H11.13c;locus_tag=SCO7359
NC_003888.3	RefSeq	CDS	8172314	8173069	.	-	0	ID=cds7290;Parent=gene7422;Dbxref=Genbank:NP_631412.1,GeneID:1102797;Name=NP_631412.1;Note=SC9H11.13c%2C possible hydrolase%2C len: 251 aa. Weakly similar to several members of the Dienelactone hydrolase family e.g. Pseudomonas putida SW:CLCD_PSEPU(EMBL:M16964) carboxymethylenebutenolidase (EC 3.1.1.45) (246 aa)%2C fasta scores opt: 265 z-score: 312.9 E(): 5.7e-10 27.1%25 identity in 255 aa overlap and Mycobacterium tuberculosis TR:O33307(EMBL:AL008967) hypothetical 26.2 kd protein (245 aa)%2C fasta scores opt: 630 z-score: 731.0 E(): 0 43.1%25 identity in 246 aa overlap. Contains a Pfam match to entry PF01738 DLH%2C Dienelactone hydrolase family.;gbkey=CDS;gene=SC9H11.13c;product=hydrolase;protein_id=NP_631412.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8172501	8179037	.	-	.	ID=id9529;Note=shares 99.76%25 sequence identity%2C over 6539 bases%2C with Streptomyces coelicolor EMBL:AB017438 orf1%2C orf2%2C orf3%2C orf4%2C orf5 genes%2C complete cds. A region involved in the multicopy suppression of afsR mutants.;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8173119	8173721	.	-	.	ID=gene7423;Dbxref=GeneID:1102798;Name=SC9H11.14c;gbkey=Gene;gene=SC9H11.14c;gene_biotype=protein_coding;gene_synonym=SC9H11.14c;locus_tag=SCO7360
NC_003888.3	RefSeq	CDS	8173119	8173721	.	-	0	ID=cds7291;Parent=gene7423;Dbxref=Genbank:NP_631413.1,GeneID:1102798;Name=NP_631413.1;Note=SC9H11.14c%2C unknown%2C len: 200 aa. Previously sequenced: Streptomyces coelicolor TR:BAA82702(EMBL:AB017438) Orf5 (200 aa). Also similar to many other proteins of undefined function e.g. Neisseria meningitidis TR:AAF40874(EMBL:AE002400) conserved hypothetical protein (213 aa)%2C fasta scores opt: 821 z-score: 1024.7 E(): 0 56.8%25 identity in 199 aa overlap. Contains a Prosite hit to PS01147 SUA5/yciO/yrdC family signature and a Pfam match to entry PF01300 Sua5_yciO_yrdC%2C SUA5/yciO/yrdC family. Contains a helix-turn-helix motif situated between residues.;gbkey=CDS;gene=SC9H11.14c;product=hypothetical protein;protein_id=NP_631413.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8173146	8173676	.	-	.	ID=id9530;Dbxref=GeneID:1102798;Note=Pfam match to entry PF01300 Sua5_yciO_yrdC%2C SUA5/yciO/yrdC family%2C score 162.40%2C E-value 7.4e-45;gbkey=misc_feature;gene=SC9H11.14c
NC_003888.3	RefSeq	sequence_feature	8173617	8173655	.	-	.	ID=id9531;Dbxref=GeneID:1102798;Note=PS01147 SUA5/yciO/yrdC family signature;gbkey=misc_feature;gene=SC9H11.14c
NC_003888.3	RefSeq	ribosome_entry_site	8173873	8173878	.	+	.	ID=id9532;gbkey=RBS
NC_003888.3	RefSeq	gene	8173887	8175416	.	+	.	ID=gene7424;Dbxref=GeneID:1102799;Name=SC9H11.15.;gbkey=Gene;gene=SC9H11.15.;gene_biotype=protein_coding;gene_synonym=SC9H11.15.;locus_tag=SCO7361
NC_003888.3	RefSeq	CDS	8173887	8175416	.	+	0	ID=cds7292;Parent=gene7424;Dbxref=Genbank:NP_631414.1,GeneID:1102799;Name=NP_631414.1;Note=SC9H11.15%2C possible DNA-binding protein%2C len: 509 aa. Previously sequenced: Streptomyces coelicolor TR:BAA82701 (EMBL:AB017438) Orf4 (509). Contains a helix-turn-helix motif situated between residues 439..460 (+3.90 SD).;gbkey=CDS;gene=SC9H11.15.;product=DNA-binding protein;protein_id=NP_631414.1;transl_table=11
NC_003888.3	RefSeq	gene	8175571	8176611	.	-	.	ID=gene7425;Dbxref=GeneID:1102800;Name=SC9H11.16c.;gbkey=Gene;gene=SC9H11.16c.;gene_biotype=protein_coding;gene_synonym=SC9H11.16c.;locus_tag=SCO7362
NC_003888.3	RefSeq	CDS	8175571	8176611	.	-	0	ID=cds7293;Parent=gene7425;Dbxref=Genbank:NP_631415.1,GeneID:1102800;Name=NP_631415.1;Note=SC9H11.16c%2C oxidoreductase%2C len: 346 aa. Previously sequenced: Streptomyces coelicolor TR:BAA82700EMBL:AB017438) Orf3 (346 aa). Also highly similar to Corynebacterium sp. ST-10 TR:Q9ZN85(EMBL:AB020760) phenylacetaldehyde reductase (385 aa)%2C fasta scores opt: 1382 z-score: 1438.5 E(): 0 65.2%25 identity in 316 aa overlap and many alcohol dehydrogenases e.g. from Sulfolobus solfataricus SW:ADH1_SULSO(EMBL:S51211) NAD-dependent alcohol dehydrogenase (EC 1.1.1.1) (347 aa)%2C fasta scores opt: 595 z-score: 624.4 E(): 2.5e-27 32.7%25 identity in 355 aa overlap. Contains a Prosite hit to PS00059 Zinc-containing alcohol dehydrogenases signature and a Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases.;gbkey=CDS;gene=SC9H11.16c.;product=oxidoreductase;protein_id=NP_631415.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8175583	8176596	.	-	.	ID=id9533;Dbxref=GeneID:1102800;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 222.80%2C E-value 4.9e-63;gbkey=misc_feature;gene=SC9H11.16c.
NC_003888.3	RefSeq	sequence_feature	8176387	8176431	.	-	.	ID=id9534;Dbxref=GeneID:1102800;Note=PS00059 Zinc-containing alcohol dehydrogenases signature;gbkey=misc_feature;gene=SC9H11.16c.
NC_003888.3	RefSeq	gene	8176680	8177471	.	-	.	ID=gene7426;Dbxref=GeneID:1102801;Name=SC9H11.17c.;gbkey=Gene;gene=SC9H11.17c.;gene_biotype=protein_coding;gene_synonym=SC9H11.17c.;locus_tag=SCO7363
NC_003888.3	RefSeq	CDS	8176680	8177471	.	-	0	ID=cds7294;Parent=gene7426;Dbxref=Genbank:NP_631416.1,GeneID:1102801;Name=NP_631416.1;Note=SC9H11.17c%2C possible oxidoreductase%2C len: 263 aa. Almost identical to the previously sequenced: Streptomyces coelicolor TR:BAA82699EMBL:AB017438) Orf2 (263 aa). Also highly similar to Pseudomonas paucimobilis SW:LINC_PSEPA(EMBL:D14595) 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase (EC 1.1.-.-) LinC (250 aa)%2C fasta scores opt: 580 z-score: 605.0 E(): 3.1e-26 42.5%25 identity in 252 aa overlap and Streptomyces coelicolor TR:O88068(EMBL:AL031541)  dehydrogenase%2C SCI35.33C (260 aa)%2C fasta scores opt: 584 z-score: 608.8 E(): 1.9e-2 43.8%25 identity in 251 aa overlap. Contains a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature and Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus.;gbkey=CDS;gene=SC9H11.17c.;product=oxidoreductase;protein_id=NP_631416.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8176704	8176796	.	-	.	ID=id9535;Dbxref=GeneID:1102801;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 30.80%2C E-value 5e-07;gbkey=misc_feature;gene=SC9H11.17c.
NC_003888.3	RefSeq	sequence_feature	8176854	8177414	.	-	.	ID=id9536;Dbxref=GeneID:1102801;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 230.70%2C E-value 2.1e-65;gbkey=misc_feature;gene=SC9H11.17c.
NC_003888.3	RefSeq	sequence_feature	8176917	8177003	.	-	.	ID=id9537;Dbxref=GeneID:1102801;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC9H11.17c.
NC_003888.3	RefSeq	gene	8177482	8178186	.	-	.	ID=gene7427;Dbxref=GeneID:1102802;Name=SC9H11.18c;gbkey=Gene;gene=SC9H11.18c;gene_biotype=protein_coding;gene_synonym=SC9H11.18c;locus_tag=SCO7364
NC_003888.3	RefSeq	CDS	8177482	8178186	.	-	0	ID=cds7295;Parent=gene7427;Dbxref=Genbank:NP_631417.1,GeneID:1102802;Name=NP_631417.1;Note=SC9H11.18c%2C possible TetR-family transcriptional regulator%2C len: 221 aa. Previously sequenced: Streptomyces coelicolor TR:BAA82698 (EMBL:AB017438) Orf1 (187 aa). Differs with the previously published sequence in the C-terminus%2C possibly due to a frameshift in the original sequence. Similar to several e.g. Streptomyces glaucescens SW:TCMR_STRGA (EMBL:M80674) tetracenomycin C transcriptional repressor%2C TcmR (226 aa)%2C fasta scores opt: 338 z-score: 403.7 E(): 5e-15 37.3%25 identity in 217 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 54..75 (+4.96 SD).;gbkey=CDS;gene=SC9H11.18c;product=TetR family transcriptional regulator;protein_id=NP_631417.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8177935	8178075	.	-	.	ID=id9538;Dbxref=GeneID:1102802;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 38.30%2C E-value 6.6e-09;gbkey=misc_feature;gene=SC9H11.18c
NC_003888.3	RefSeq	ribosome_entry_site	8178278	8178281	.	+	.	ID=id9539;gbkey=RBS
NC_003888.3	RefSeq	gene	8178292	8178615	.	+	.	ID=gene7428;Dbxref=GeneID:1102803;Name=SC9H11.19;gbkey=Gene;gene=SC9H11.19;gene_biotype=protein_coding;gene_synonym=SC9H11.19;locus_tag=SCO7365
NC_003888.3	RefSeq	CDS	8178292	8178615	.	+	0	ID=cds7296;Parent=gene7428;Dbxref=Genbank:NP_631418.1,GeneID:1102803;Name=NP_631418.1;Note=SC9H11.19%2C unknown%2C len: 107 aa.;gbkey=CDS;gene=SC9H11.19;product=hypothetical protein;protein_id=NP_631418.1;transl_table=11
NC_003888.3	RefSeq	gene	8178701	8179468	.	+	.	ID=gene7429;Dbxref=GeneID:1102804;Name=SC9H11.20;gbkey=Gene;gene=SC9H11.20;gene_biotype=protein_coding;gene_synonym=SC9H11.20;locus_tag=SCO7366
NC_003888.3	RefSeq	CDS	8178701	8179468	.	+	0	ID=cds7297;Parent=gene7429;Dbxref=Genbank:NP_631419.1,GeneID:1102804;Name=NP_631419.1;Note=SC9H11.20%2C unknown%2C len: 225 aa. Similar to Streptomyces coelicolor TR:O86750(EMBL:AL031035) hypothetical 28.3 kd protein%2C SC6A9.18C (266 aa)%2C fasta scores opt: 304 z-score: 354.9 E(): 2.6e-12 32.8%25 identity in 253 aa overlap.;gbkey=CDS;gene=SC9H11.20;product=hypothetical protein;protein_id=NP_631419.1;transl_table=11
NC_003888.3	RefSeq	gene	8179502	8180842	.	-	.	ID=gene7430;Dbxref=GeneID:1102805;Name=SC9H11.21c;gbkey=Gene;gene=SC9H11.21c;gene_biotype=protein_coding;gene_synonym=SC9H11.21c;locus_tag=SCO7367
NC_003888.3	RefSeq	CDS	8179502	8180842	.	-	0	ID=cds7298;Parent=gene7430;Dbxref=Genbank:NP_631420.1,GeneID:1102805;Name=NP_631420.1;Note=SC9H11.21c%2C probable membrane efflux protein%2C len: 446 aa. Similar to many proteins involved in arsenical resistance e.g. Staphylococcus xylosus SW:ARSB_STAXY(EMBL:M80565) arsenical pump membrane protein ArsB (429 aa)%2C fasta scores opt: 255 z-score: 240.6 E(): 6.1e-06 24.1%25 identity in 440 aa overlap and Mycobacterium tuberculosis TR:P96860(EMBL:Z92774) probable arsenical pump membrane protein (413 aa)%2C fasta scores opt: 730 z-score: 667.0 E(): 1.1e-29 53.7%25 identity in 445 aa overlap. Contains possible N-terminal region signal sequence peptide and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC9H11.21c;product=membrane efflux protein;protein_id=NP_631420.1;transl_table=11
NC_003888.3	RefSeq	gene	8181049	8181612	.	+	.	ID=gene7431;Dbxref=GeneID:1102806;Name=SC9H11.22;gbkey=Gene;gene=SC9H11.22;gene_biotype=protein_coding;gene_synonym=SC9H11.22;locus_tag=SCO7368
NC_003888.3	RefSeq	CDS	8181049	8181612	.	+	0	ID=cds7299;Parent=gene7431;Dbxref=Genbank:NP_631421.1,GeneID:1102806;Name=NP_631421.1;Note=SC9H11.22%2C unknown%2C len: 187 aa.;gbkey=CDS;gene=SC9H11.22;product=hypothetical protein;protein_id=NP_631421.1;transl_table=11
NC_003888.3	RefSeq	gene	8181660	8182973	.	-	.	ID=gene7432;Dbxref=GeneID:1102807;Name=SC9H11.23c;gbkey=Gene;gene=SC9H11.23c;gene_biotype=protein_coding;gene_synonym=SC9H11.23c;locus_tag=SCO7369
NC_003888.3	RefSeq	CDS	8181660	8182973	.	-	0	ID=cds7300;Parent=gene7432;Dbxref=Genbank:NP_631422.1,GeneID:1102807;Name=NP_631422.1;Note=SC9H11.23c%2C possible transmembrane transport protein%2C len: 406 aa. Similar to many membrane transport proteins e.g. Zymomonas mobilis TR:Q9XBR9(EMBL:AF157493) transporter%2C DitE (431 aa)%2C fasta scores opt: 499 z-score: 512.6 E(): 4.3e-21 26.3%25 identity in 407 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC9H11.23c;product=transmembrane transport protein;protein_id=NP_631422.1;transl_table=11
NC_003888.3	RefSeq	gene	8183344	8184384	.	+	.	ID=gene7433;Dbxref=GeneID:1102808;Name=SC9H11.24;gbkey=Gene;gene=SC9H11.24;gene_biotype=protein_coding;gene_synonym=SC9H11.24;locus_tag=SCO7370
NC_003888.3	RefSeq	CDS	8183344	8184384	.	+	0	ID=cds7301;Parent=gene7433;Dbxref=Genbank:NP_631423.1,GeneID:1102808;Name=NP_631423.1;Note=SC9H11.24%2C NAD-dependent dehydratase%2C len: 346 aa. Similar to many members of the sugar epimerase/dehydratase family including: Streptomyces griseus SW:STRE_STRGR(EMBL:X62567) DTDP-glucose 4%2C6-dehydratase (EC 4.2.1.46) (328 aa)%2C fasta scores opt: 363 z-score: 378.8 E(): 1.2e-13 31.8%25 identity in 336 aa overlap and Streptomyces coelicolor TR:Q9ZBN0 (EMBL:AL034492) nucleotide-sugar dehydratase%2C SC6C5.15 (330 aa)%2C fasta scores opt: 977 z-score: 1003.9 E(): 0 52.6%25 identity in 321 aa overlap. Contains a Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family.;gbkey=CDS;gene=SC9H11.24;product=NAD-dependent dehydratase;protein_id=NP_631423.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8183401	8184315	.	+	.	ID=id9540;Dbxref=GeneID:1102808;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 1.70%2C E-value 2.4e-12;gbkey=misc_feature;gene=SC9H11.24
NC_003888.3	RefSeq	stem_loop	8184430	8184501	.	+	.	ID=id9541;Note=possible stem loop with 94%25 matches over 36 bases.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8184508	8185071	.	-	.	ID=gene7434;Dbxref=GeneID:1102809;Name=SC9H11.25c;gbkey=Gene;gene=SC9H11.25c;gene_biotype=protein_coding;gene_synonym=SC9H11.25c;locus_tag=SCO7371
NC_003888.3	RefSeq	CDS	8184508	8185071	.	-	0	ID=cds7302;Parent=gene7434;Dbxref=Genbank:NP_631424.1,GeneID:1102809;Name=NP_631424.1;Note=SC9H11.25c%2C unknown%2C len: 187 aa. Weakly similar to proteins of unknown function from: Schizosaccharomyces pombe (Fission yeast) TR:CAB60016 (EMBL:AL132779) (203 aa)%2C fasta scores opt: 275 z-score: 313.3 E(): 5.4e-10 25.7%25 identity in 175 aa overlap and Streptomyces coelicolor TR:CAB53436(EMBL:AL109989) SCJ12.24C (157 aa)%2C fasta scores opt: 139 z-score: 166.4 E(): 0.082 27.0%25 identity in 122 aa overlap.;gbkey=CDS;gene=SC9H11.25c;product=hypothetical protein;protein_id=NP_631424.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8185076	8185082	.	-	.	ID=id9542;gbkey=RBS
NC_003888.3	RefSeq	gene	8185152	8185685	.	-	.	ID=gene7435;Dbxref=GeneID:1102810;Name=SC9H11.26c;gbkey=Gene;gene=SC9H11.26c;gene_biotype=protein_coding;gene_synonym=SC9H11.26c;locus_tag=SCO7372
NC_003888.3	RefSeq	CDS	8185152	8185685	.	-	0	ID=cds7303;Parent=gene7435;Dbxref=Genbank:NP_631425.1,GeneID:1102810;Name=NP_631425.1;Note=SC9H11.26c%2C unknown%2C len: 177 aa.;gbkey=CDS;gene=SC9H11.26c;product=hypothetical protein;protein_id=NP_631425.1;transl_table=11
NC_003888.3	RefSeq	gene	8185841	8186332	.	-	.	ID=gene7436;Dbxref=GeneID:1102811;Name=SC9H11.27c;gbkey=Gene;gene=SC9H11.27c;gene_biotype=protein_coding;gene_synonym=SC9H11.27c;locus_tag=SCO7373
NC_003888.3	RefSeq	CDS	8185841	8186332	.	-	0	ID=cds7304;Parent=gene7436;Dbxref=Genbank:NP_631426.1,GeneID:1102811;Name=NP_631426.1;Note=SC9H11.27c%2C unknown%2C len: 163 aa.;gbkey=CDS;gene=SC9H11.27c;product=hypothetical protein;protein_id=NP_631426.1;transl_table=11
NC_003888.3	RefSeq	gene	8186329	8188821	.	-	.	ID=gene7437;Dbxref=GeneID:1102812;Name=narB;gbkey=Gene;gene=narB;gene_biotype=protein_coding;gene_synonym=narB,SC10G8.01c;locus_tag=SCO7374
NC_003888.3	RefSeq	CDS	8186329	8188821	.	-	0	ID=cds7305;Parent=gene7437;Dbxref=Genbank:NP_733731.1,GeneID:1102812;Name=NP_733731.1;Note=SC10G8.01c%2C possible oxidoreductase%2C partial CDS%2C len: > 355 aa. Similar to many e.g. Paracoccus denitrificans SW:NAPA_PARDT (EMBL:Z36773) periplasmic nitrate reductase precursor (EC 1.7.99.4) (831 aa)%2C fasta scores opt: 550 z-score: 651.4 E(): 7.2e-29 33.1%25 identity in 317 aa overlap.~SC9H11.28c%2C narB%2C nitrate reductase (EC 1.7.99.4)%2C partial CDS%2C len: > 508 aa. Highly similar to many including: Synechocystis sp. (strain PCC 7942) SW:NARB_SYNP7 (EMBL:X74597) nitrate reductase (EC 1.7.99.4)%2C NarB (729 aa)%2C fasta scores opt: 583 z-score: 613.8 E(): 1e-26 36.1%25 identity in 457 aa overlap and Oscillatoria chalybea TR:Q51328 (EMBL:X89445) nitrate reductase (EC 1.7.99.4)%2C NarB (737 aa)%2C fasta scores opt: 610 z-score: 642.1 E(): 2.6e-28 35.7%25 identity in 460 aa overlap. Contains a Prosite hit to PS00490 Prokaryotic molybdopterin oxidoreductases signature 2 and Pfam matches to entries PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases and PF01568 Molydop_binding%2C Molydopterin dinucleotide binding domain.;gbkey=CDS;gene=narB;product=nitrate reductase NarB (fragment);protein_id=NP_733731.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8186506	8186868	.	-	.	ID=id9543;Dbxref=GeneID:1102812;Note=Pfam match to entry PF01568 Molydop_binding%2C Molydopterin dinucleotide binding domain%2C score 96.40%2C E-value 5.5e-25;gbkey=misc_feature;gene=narB
NC_003888.3	RefSeq	sequence_feature	8187244	8187432	.	-	.	ID=id9544;Dbxref=GeneID:1102812;Note=Pfam match to entry PF00384 molybdopterin%2C Prokaryotic molybdopterin oxidoreductases%2C score 98.90%2C E-value 2.6e-31;gbkey=misc_feature;gene=narB
NC_003888.3	RefSeq	sequence_feature	8187352	8187405	.	-	.	ID=id9545;Dbxref=GeneID:1102812;Note=PS00490 Prokaryotic molybdopterin oxidoreductases signature 2;gbkey=misc_feature;gene=narB
NC_003888.3	RefSeq	ribosome_entry_site	8188828	8188832	.	-	.	ID=id9546;gbkey=RBS
NC_003888.3	RefSeq	gene	8188898	8189692	.	+	.	ID=gene7438;Dbxref=GeneID:1102813;Name=SC10G8.02;gbkey=Gene;gene=SC10G8.02;gene_biotype=protein_coding;gene_synonym=SC10G8.02;locus_tag=SCO7375
NC_003888.3	RefSeq	CDS	8188898	8189692	.	+	0	ID=cds7306;Parent=gene7438;Dbxref=Genbank:NP_631427.1,GeneID:1102813;Name=NP_631427.1;Note=SC10G8.02%2C possible acetyltransferase%2C len: 264 aa. Similar to Deinococcus radiodurans TR:AAF12253(EMBL:AE001862)  acetyltransferase (210 aa)%2C fasta scores opt: 272 z-score: 314.3 E(): 4.3e-10 30.9%25 identity in 207 aa overlap. Contains a Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family. Contains a 7xDT repeat region in the C-terminus.;gbkey=CDS;gene=SC10G8.02;product=acetyltransferase;protein_id=NP_631427.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8188949	8189497	.	+	.	ID=id9547;Dbxref=GeneID:1102813;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 24.10%2C E-value 0.0032;gbkey=misc_feature;gene=SC10G8.02
NC_003888.3	RefSeq	repeat_region	8189557	8189671	.	+	.	ID=id9548;Dbxref=GeneID:1102813;Note=repeat region containing 12x GGA and 3x GCACGAC repeats.;gbkey=repeat_region;gene=SC10G8.02
NC_003888.3	RefSeq	gene	8189725	8190453	.	-	.	ID=gene7439;Dbxref=GeneID:1102814;Name=SC10G8.03c;gbkey=Gene;gene=SC10G8.03c;gene_biotype=protein_coding;gene_synonym=SC10G8.03c;locus_tag=SCO7376
NC_003888.3	RefSeq	CDS	8189725	8190453	.	-	0	ID=cds7307;Parent=gene7439;Dbxref=Genbank:NP_631428.1,GeneID:1102814;Name=NP_631428.1;Note=SC10G8.03c%2C unknown%2C len: 242 aa. Weakly similar to Aeropyrum pernix TR:Q9Y911 (EMBL:AP000064) hypothetical protein (205 aa)%2C fasta scores opt: 226 z-score: 263.2 E(): 3e-07 31.8%25 identity in 211 aa overlap and to TR:CAC48481 (EMBL:AL603642) Rhizobium meliloti (Sinorhizobium meliloti) conserved hypothetical protein SMB20081%2C 236 aa%3B fasta scores: opt: 577 Z-score: 646.5 E(): 2.2e-28%3B 46.256%25 identity in 227 aa overlap;gbkey=CDS;gene=SC10G8.03c;product=hypothetical protein;protein_id=NP_631428.1;transl_table=11
NC_003888.3	RefSeq	gene	8190450	8190707	.	-	.	ID=gene7440;Dbxref=GeneID:1102815;Name=SC10G8.04c;gbkey=Gene;gene=SC10G8.04c;gene_biotype=protein_coding;gene_synonym=SC10G8.04c;locus_tag=SCO7377
NC_003888.3	RefSeq	CDS	8190450	8190707	.	-	0	ID=cds7308;Parent=gene7440;Dbxref=Genbank:NP_631429.1,GeneID:1102815;Name=NP_631429.1;Note=SC10G8.04c%2C unknown%2C len: 85 aa.;gbkey=CDS;gene=SC10G8.04c;product=hypothetical protein;protein_id=NP_631429.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8190458	8190462	.	-	.	ID=id9549;Dbxref=GeneID:1102815;gbkey=RBS;gene=SC10G8.04c
NC_003888.3	RefSeq	gene	8190704	8191414	.	-	.	ID=gene7441;Dbxref=GeneID:1102816;Name=SC10G8.05c;gbkey=Gene;gene=SC10G8.05c;gene_biotype=protein_coding;gene_synonym=SC10G8.05c;locus_tag=SCO7378
NC_003888.3	RefSeq	CDS	8190704	8191414	.	-	0	ID=cds7309;Parent=gene7441;Dbxref=Genbank:NP_631430.1,GeneID:1102816;Name=NP_631430.1;Note=SC10G8.05c%2C unknown%2C len: 236 aa.;gbkey=CDS;gene=SC10G8.05c;product=hypothetical protein;protein_id=NP_631430.1;transl_table=11
NC_003888.3	RefSeq	gene	8191562	8191873	.	+	.	ID=gene7442;Dbxref=GeneID:1102817;Name=SC10G8.06;gbkey=Gene;gene=SC10G8.06;gene_biotype=protein_coding;gene_synonym=SC10G8.06;locus_tag=SCO7379
NC_003888.3	RefSeq	CDS	8191562	8191873	.	+	0	ID=cds7310;Parent=gene7442;Dbxref=Genbank:NP_631431.1,GeneID:1102817;Name=NP_631431.1;Note=SC10G8.06%2C unknown%2C len: 103 aa.;gbkey=CDS;gene=SC10G8.06;product=hypothetical protein;protein_id=NP_631431.1;transl_table=11
NC_003888.3	RefSeq	gene	8191911	8193224	.	-	.	ID=gene7443;Dbxref=GeneID:1102818;Name=SC10G8.07c;gbkey=Gene;gene=SC10G8.07c;gene_biotype=protein_coding;gene_synonym=SC10G8.07c;locus_tag=SCO7380
NC_003888.3	RefSeq	CDS	8191911	8193224	.	-	0	ID=cds7311;Parent=gene7443;Dbxref=Genbank:NP_631432.1,GeneID:1102818;Name=NP_631432.1;Note=SC10G8.07c%2C unknown%2C len: 437 aa. Similar in parts to several proteins of undefined function e.g. Streptomyces coelicolor TR:Q9ZBJ0 (EMBL:AL035161) conserved hypothetical protein%2C SC9C7.20 (860 aa)%2C fasta scores opt: 271 z-score: 309.7 E(): 7.7e-10 30.3%25 identity in 274 aa overlap;gbkey=CDS;gene=SC10G8.07c;product=hypothetical protein;protein_id=NP_631432.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8193246	8193250	.	+	.	ID=id9550;gbkey=RBS
NC_003888.3	RefSeq	gene	8193260	8193673	.	+	.	ID=gene7444;Dbxref=GeneID:1102819;Name=SC10G8.08;gbkey=Gene;gene=SC10G8.08;gene_biotype=protein_coding;gene_synonym=SC10G8.08;locus_tag=SCO7381
NC_003888.3	RefSeq	CDS	8193260	8193673	.	+	0	ID=cds7312;Parent=gene7444;Dbxref=Genbank:NP_631433.1,GeneID:1102819;Name=NP_631433.1;Note=SC10G8.08%2C unknown%2C len: 137 aa.;gbkey=CDS;gene=SC10G8.08;product=hypothetical protein;protein_id=NP_631433.1;transl_table=11
NC_003888.3	RefSeq	gene	8194036	8194350	.	-	.	ID=gene7445;Dbxref=GeneID:1102820;Name=SC10G8.09c;gbkey=Gene;gene=SC10G8.09c;gene_biotype=protein_coding;gene_synonym=SC10G8.09c;locus_tag=SCO7382
NC_003888.3	RefSeq	CDS	8194036	8194350	.	-	0	ID=cds7313;Parent=gene7445;Dbxref=Genbank:NP_631434.1,GeneID:1102820;Name=NP_631434.1;Note=SC10G8.09c%2C unknown%2C len: 104 aa. Weakly similar to a protein of unknown function from Streptomyces coelicolor TR:Q9Z548(EMBL:AL035212) hypothetical 11.6 KD protein%2C SC9B2.11 (109 aa)%2C fasta scores opt: 101 z-score: 134.7 E():4.5 35.1%25 identity in 74 aa overlap.;gbkey=CDS;gene=SC10G8.09c;product=hypothetical protein;protein_id=NP_631434.1;transl_table=11
NC_003888.3	RefSeq	gene	8194767	8195147	.	+	.	ID=gene7446;Dbxref=GeneID:1102821;Name=SC10G8.10;gbkey=Gene;gene=SC10G8.10;gene_biotype=protein_coding;gene_synonym=SC10G8.10;locus_tag=SCO7383
NC_003888.3	RefSeq	CDS	8194767	8195147	.	+	0	ID=cds7314;Parent=gene7446;Dbxref=Genbank:NP_631435.1,GeneID:1102821;Name=NP_631435.1;Note=SC10G8.10%2C doubtful CDS%2C len: 126 aa.;gbkey=CDS;gene=SC10G8.10;product=hypothetical protein;protein_id=NP_631435.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	8195162	8195200	.	+	.	ID=id9551;Note=possible stem loop with 100 %25 matches over 17 bases and a loop of 5 bases.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8195889	8197229	.	+	.	ID=gene7447;Dbxref=GeneID:1102822;Name=SC10G8.11;gbkey=Gene;gene=SC10G8.11;gene_biotype=protein_coding;gene_synonym=SC10G8.11;locus_tag=SCO7384
NC_003888.3	RefSeq	CDS	8195889	8197229	.	+	0	ID=cds7315;Parent=gene7447;Dbxref=Genbank:NP_631436.1,GeneID:1102822;Name=NP_631436.1;Note=SC10G8.11%2C possible transmembrane transport protein%2C len: 446 aa. Similar to many other transporters including: Streptomyces coelicolor TR:O69958(EMBL:AL022268) transmembrane transport protein%2C SC4H2.03C (411 aa)%2C fasta scores opt: 808 z-score: 828.6 E(): 0 37.9%25 identity in 414 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence.;gbkey=CDS;gene=SC10G8.11;product=transmembrane transport protein;protein_id=NP_631436.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8197371	8197376	.	+	.	ID=id9552;gbkey=RBS
NC_003888.3	RefSeq	gene	8197385	8197828	.	+	.	ID=gene7448;Dbxref=GeneID:1102823;Name=SC10G8.12;gbkey=Gene;gene=SC10G8.12;gene_biotype=protein_coding;gene_synonym=SC10G8.12;locus_tag=SCO7385
NC_003888.3	RefSeq	CDS	8197385	8197828	.	+	0	ID=cds7316;Parent=gene7448;Dbxref=Genbank:NP_631437.1,GeneID:1102823;Name=NP_631437.1;Note=SC10G8.12%2C possible integral membrane protein%2C len: 147 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC10G8.12;product=hypothetical protein;protein_id=NP_631437.1;transl_table=11
NC_003888.3	RefSeq	gene	8198068	8199240	.	-	.	ID=gene7449;Dbxref=GeneID:1102824;Name=SC10G8.13c;gbkey=Gene;gene=SC10G8.13c;gene_biotype=protein_coding;gene_synonym=SC10G8.13c;locus_tag=SCO7386
NC_003888.3	RefSeq	CDS	8198068	8199240	.	-	0	ID=cds7317;Parent=gene7449;Dbxref=Genbank:NP_631438.1,GeneID:1102824;Name=NP_631438.1;Note=SC10G8.13c%2C possible  serine protease%2C len: 390 aa. Similar to many serine proteases e.g. Streptomyces griseus SW:PRTC_STRGR(EMBL:L29018) serine protease C precursor (EC 3.4.21.-) (457 aa)%2C fasta scores opt: 983 z-score: 1020.1 E(): 0 44.4%25 identity in 403 aa overlap and Streptomyces sp. TR:Q55353(EMBL:X74102) alkaline serine protease II (382 aa)%2C fasta scores opt: 959 z-score: 996.4 E():0 44.7%25 identity in 403 aa overlap. Contains a Prosite hits to PS00134 Serine proteases%2C trypsin family%2C histidine active site PS00135 Serine proteases%2C trypsin family%2C serine active site and a Pfam match to entry PF00089 trypsin%2C Trypsin. Also contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC10G8.13c;product=serine protease;protein_id=NP_631438.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8198092	8198628	.	-	.	ID=id9553;Dbxref=GeneID:1102824;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 46.80%2C E-value 5.5e-14;gbkey=misc_feature;gene=SC10G8.13c
NC_003888.3	RefSeq	sequence_feature	8198194	8198229	.	-	.	ID=id9554;Dbxref=GeneID:1102824;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site;gbkey=misc_feature;gene=SC10G8.13c
NC_003888.3	RefSeq	sequence_feature	8198539	8198556	.	-	.	ID=id9555;Dbxref=GeneID:1102824;Note=PS00134 Serine proteases%2C trypsin family%2C histidine active site;gbkey=misc_feature;gene=SC10G8.13c
NC_003888.3	RefSeq	gene	8199503	8200009	.	+	.	ID=gene7450;Dbxref=GeneID:1102825;Name=SC10G8.14;gbkey=Gene;gene=SC10G8.14;gene_biotype=protein_coding;gene_synonym=SC10G8.14;locus_tag=SCO7387
NC_003888.3	RefSeq	CDS	8199503	8200009	.	+	0	ID=cds7318;Parent=gene7450;Dbxref=Genbank:NP_631439.1,GeneID:1102825;Name=NP_631439.1;Note=SC10G8.14%2C unknown%2C len: 168 aa%3B similar to another from Streptomyces coelicolor SC8D11.07 TR:Q9AK12 (EMBL:AL512944) hypothetical protein fasta scores%3B opt: 426%2C Z-score: 537.3%2C E(): 2.7e-22%2C 46.763%25 identity (46.763%25 ungapped) in 139 aa overlap.;gbkey=CDS;gene=SC10G8.14;product=hypothetical protein;protein_id=NP_631439.1;transl_table=11
NC_003888.3	RefSeq	gene	8200002	8201621	.	+	.	ID=gene7451;Dbxref=GeneID:1102826;Name=SC10G8.15;gbkey=Gene;gene=SC10G8.15;gene_biotype=protein_coding;gene_synonym=SC10G8.15;locus_tag=SCO7388
NC_003888.3	RefSeq	CDS	8200002	8201621	.	+	0	ID=cds7319;Parent=gene7451;Dbxref=Genbank:NP_631440.1,GeneID:1102826;Name=NP_631440.1;Note=SC10G8.15%2C possible dehydrogenase%2C len: 539 aa. Similar to many including: Synechocystis sp. TR:Q55808(EMBL:D64004) phytoene dehydrogenase (542 aa)%2C fasta scores opt: 605 z-score: 655.2 E(): 4.5e-29 31.7%25 identity in 543 aa overlap and Rhodobacter sphaeroides SW:CRTD_RHOSH(EMBL:X63204) methoxyneurosporene dehydrogenase%2C CrtD (495 aa)%2C fasta scores opt: 268 z-score: 292.4 E(): 7.2e-09 28.2%25 identity in 528 aa overlap.;gbkey=CDS;gene=SC10G8.15;product=dehydrogenase;protein_id=NP_631440.1;transl_table=11
NC_003888.3	RefSeq	gene	8201665	8202543	.	+	.	ID=gene7452;Dbxref=GeneID:1102827;Name=SC10G8.16;gbkey=Gene;gene=SC10G8.16;gene_biotype=protein_coding;gene_synonym=SC10G8.16;locus_tag=SCO7389
NC_003888.3	RefSeq	CDS	8201665	8202543	.	+	0	ID=cds7320;Parent=gene7452;Dbxref=Genbank:NP_631441.1,GeneID:1102827;Name=NP_631441.1;Note=SC10G8.16%2C possible oxidoreductase%2C len: 292 aa. Similar to many including: Streptomyces clavuligerus TR:O54197(EMBL:AJ000671) clavulanate-9-aldehyde reductase (247 aa)%2C fasta scores opt: 352 z-score: 389.3 E(): 2.9e-14 33.0%25 identity in 221 aa overlap and Streptomyces coelicolor TR:CAB59666(EMBL:AL132674) probable oxidoreductase%2C SCE87.21c (297 aa)%2C fasta scores opt: 931 z-score: 1011.4 E():0 52.8%25 identity in 286 aa overlap. Contains a Prosite hit PS00061 Short-chain dehydrogenases/reductases family signature and a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SC10G8.16;product=short chain dehydrogenase;protein_id=NP_631441.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8201689	8202231	.	+	.	ID=id9556;Dbxref=GeneID:1102827;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 154.50%2C E-value 1.8e-42;gbkey=misc_feature;gene=SC10G8.16
NC_003888.3	RefSeq	sequence_feature	8202082	8202168	.	+	.	ID=id9557;Dbxref=GeneID:1102827;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC10G8.16
NC_003888.3	RefSeq	gene	8202594	8203097	.	-	.	ID=gene7453;Dbxref=GeneID:1102828;Name=SC10G8.17c;gbkey=Gene;gene=SC10G8.17c;gene_biotype=pseudogene;gene_synonym=SC10G8.17c;locus_tag=SCO7390;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8202594	8203097	.	-	.	ID=id9558;Dbxref=GeneID:1102828;Note=SC10G8.17c%2C possible dehydrogenase%2C pseudogene%2C len: 168 aa. Highly similar to the C-terminus of Streptomyces griseus TR:P72449(EMBL:X95596) dehydrogenase found within the crt genes for carotenoid biosynthesis (517 aa). Also highly similar to Streptomyces coelicolor TR:CAB53156(EMBL:AL109962) dehydrogenase (fragment)%2C CrtU or SCJ1.38c (>336 aa).%3Bdehydrogenase (pseudogene).;gbkey=misc_feature;gene=SC10G8.17c
NC_003888.3	RefSeq	repeat_region	8203387	8203479	.	+	.	ID=id9559;Note=degenerate repeat region containing 6xCGGA(C/G)GG(G/C)%2C 2xCCGC and 2xACTGC repeats.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8203616	8203951	.	+	.	ID=gene7454;Dbxref=GeneID:1102829;Name=SC10G8.18;gbkey=Gene;gene=SC10G8.18;gene_biotype=pseudogene;gene_synonym=SC10G8.18,SC10G8.19;locus_tag=SCO7391;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8203616	8203951	.	+	.	ID=id9560;Dbxref=PSEUDO:CAD55400.1,GeneID:1102829;Note=phytoene dehydrogenase%3BSC10G8.18%2C possible phytoene dehydrogenase%2C pseudogene%2C len: 108 aa. This CDS appears to be a gene fragment which is highly similar to the N-terminus of many phytoene dehydrogenases e.g. Streptomyces griseus SW:CRTI_STRGR(EMBL:L37405) phytoene dehydrogenase%2C CrtE (507 aa). Also highly similar to Streptomyces coelicolor TR:CAB53153(EMBL:AL109962) phytoene dehydrogenase%2C CrtE or SCJ1.35 (523 aa).~SC10G8.19%2C possible methylesterase%2C pseudogene%2C len: 37 aa. Possible gene fragment which is highly similar to the C-terminus of Streptomyces coelicolor TR:CAB53155(EMBL:AL109962) methylesterase%2C CrtV or SCJ1.37 (336 aa).;gbkey=misc_feature;gene=SC10G8.18
NC_003888.3	RefSeq	ribosome_entry_site	8204046	8204049	.	+	.	ID=id9561;gbkey=RBS
NC_003888.3	RefSeq	gene	8204060	8204551	.	+	.	ID=gene7455;Dbxref=GeneID:1102830;Name=SC10G8.20;gbkey=Gene;gene=SC10G8.20;gene_biotype=protein_coding;gene_synonym=SC10G8.20;locus_tag=SCO7392
NC_003888.3	RefSeq	CDS	8204060	8204551	.	+	0	ID=cds7321;Parent=gene7455;Dbxref=Genbank:NP_631442.1,GeneID:1102830;Name=NP_631442.1;Note=SC10G8.20%2C unknown%2C len: 163 aa.;gbkey=CDS;gene=SC10G8.20;product=hypothetical protein;protein_id=NP_631442.1;transl_table=11
NC_003888.3	RefSeq	gene	8204557	8205306	.	-	.	ID=gene7456;Dbxref=GeneID:1102831;Name=SC10G8.21c;gbkey=Gene;gene=SC10G8.21c;gene_biotype=protein_coding;gene_synonym=SC10G8.21c;locus_tag=SCO7393
NC_003888.3	RefSeq	CDS	8204557	8205306	.	-	0	ID=cds7322;Parent=gene7456;Dbxref=Genbank:NP_631443.1,GeneID:1102831;Name=NP_631443.1;Note=SC10G8.21c%2C possible lipoprotein%2C len: 249 aa. Weakly similar to Streptomyces coelicolor SW:YRJ1_STRCO(EMBL:L24552) hypothetical protein in RplJ 5'region (Orf 1) (fragment) (>256 aa)%2C fasta scores opt: 120 z-score: 142.7 E(): 1.6 20.3%25 identity in 261 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC10G8.21c;product=lipoprotein;protein_id=NP_631443.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8205238	8205270	.	-	.	ID=id9562;Dbxref=GeneID:1102831;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SC10G8.21c
NC_003888.3	RefSeq	gene	8205523	8206461	.	+	.	ID=gene7457;Dbxref=GeneID:1102832;Name=SC10G8.22;gbkey=Gene;gene=SC10G8.22;gene_biotype=protein_coding;gene_synonym=SC10G8.22;locus_tag=SCO7394
NC_003888.3	RefSeq	CDS	8205523	8206461	.	+	0	ID=cds7323;Parent=gene7457;Dbxref=Genbank:NP_631444.1,GeneID:1102832;Name=NP_631444.1;Note=SC10G8.22%2C possible integral membrane protein%2C len: 312 aa. Similar to several proteins of undefined function e.g. Deinococcus radiodurans TR:AAF11939(EMBL:AE002070) Conserved hypothetical protein (304 aa)%2C fasta scores opt: 227 z-score: 259.6 E(): 4.8e-07 29.4%25 identity in 310 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence.;gbkey=CDS;gene=SC10G8.22;product=hypothetical protein;protein_id=NP_631444.1;transl_table=11
NC_003888.3	RefSeq	gene	8206425	8207990	.	-	.	ID=gene7458;Dbxref=GeneID:1102833;Name=SC10G8.23c;gbkey=Gene;gene=SC10G8.23c;gene_biotype=protein_coding;gene_synonym=SC10G8.23c;locus_tag=SCO7395
NC_003888.3	RefSeq	CDS	8206425	8207990	.	-	0	ID=cds7324;Parent=gene7458;Dbxref=Genbank:NP_631445.1,GeneID:1102833;Name=NP_631445.1;Note=SC10G8.23c%2C possible membrane transport protein%2C len: 521 aa. Highly similar in several transport proteins involved in osmoregulation e.g. Escherichia coli SW:PROP_ECOLI(EMBL:M83089) proline/betaine transporter (proline porter II)%2C ProP (500 aa)%2C fasta scores opt: 1557 z-score: 1688.1 E():0 47.9%25 identity in 466 aa overlap. Contains Prosite hits to PS00217 Sugar transport proteins signature 2 and PS00216 Sugar transport proteins signature 1%2C as well as a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter. Also contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC10G8.23c;product=membrane transport protein;protein_id=NP_631445.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8206509	8207789	.	-	.	ID=id9563;Dbxref=GeneID:1102833;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 204.30%2C E-value 1.9e-57;gbkey=misc_feature;gene=SC10G8.23c
NC_003888.3	RefSeq	sequence_feature	8206875	8206928	.	-	.	ID=id9564;Dbxref=GeneID:1102833;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC10G8.23c
NC_003888.3	RefSeq	sequence_feature	8207379	8207456	.	-	.	ID=id9565;Dbxref=GeneID:1102833;Note=PS00217 Sugar transport proteins signature 2;gbkey=misc_feature;gene=SC10G8.23c
NC_003888.3	RefSeq	gene	8208050	8209387	.	-	.	ID=gene7459;Dbxref=GeneID:1102834;Name=SC10G8.24c;gbkey=Gene;gene=SC10G8.24c;gene_biotype=protein_coding;gene_synonym=SC10G8.24c;locus_tag=SCO7396
NC_003888.3	RefSeq	CDS	8208050	8209387	.	-	0	ID=cds7325;Parent=gene7459;Dbxref=Genbank:NP_631446.1,GeneID:1102834;Name=NP_631446.1;Note=SC10G8.24c. possible hypothetical protein%2C len: 445 aa. Weakly similar to Mycobacterium tuberculosis TR:O06598(EMBL:Z95586) hypothetical 48.0 KD protein (446 aa)%2C fasta scores opt: 399 z-score: 416.0 E(): 9.3e-16 28.2%25 identity in 387 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC10G8.24c;product=hypothetical protein;protein_id=NP_631446.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8209393	8209399	.	-	.	ID=id9566;gbkey=RBS
NC_003888.3	RefSeq	gene	8209545	8210141	.	-	.	ID=gene7460;Dbxref=GeneID:1102835;Name=SC10G8.25c;gbkey=Gene;gene=SC10G8.25c;gene_biotype=protein_coding;gene_synonym=SC10G8.25c;locus_tag=SCO7397
NC_003888.3	RefSeq	CDS	8209545	8210141	.	-	0	ID=cds7326;Parent=gene7460;Dbxref=Genbank:NP_631447.1,GeneID:1102835;Name=NP_631447.1;Note=SC10G8.25c%2C unknown%2C len: 198 aa. Weakly similar to several e.g. Bacillus subtilis TR: O05231(EMBL:Z93933) hypothetical 23.8 KD protein (205 aa)%2C fasta scores opt: 213 z-score: 271.6 E(): 1e-07 28.2%25 identity in 181 aa overlap.;gbkey=CDS;gene=SC10G8.25c;product=hypothetical protein;protein_id=NP_631447.1;transl_table=11
NC_003888.3	RefSeq	gene	8210201	8212285	.	-	.	ID=gene7461;Dbxref=GeneID:1102836;Name=SC10G8.26c;gbkey=Gene;gene=SC10G8.26c;gene_biotype=protein_coding;gene_synonym=SC10G8.26c;locus_tag=SCO7398
NC_003888.3	RefSeq	CDS	8210201	8212285	.	-	0	ID=cds7327;Parent=gene7461;Dbxref=Genbank:NP_631448.1,GeneID:1102836;Name=NP_631448.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome;gbkey=CDS;gene=SC10G8.26c;product=iron-hydroxamate transporter permease subunit;protein_id=NP_631448.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8210213	8211103	.	-	.	ID=id9567;Dbxref=GeneID:1102836;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 279.50%2C E-value 4.3e-80;gbkey=misc_feature;gene=SC10G8.26c
NC_003888.3	RefSeq	sequence_feature	8211230	8212141	.	-	.	ID=id9568;Dbxref=GeneID:1102836;Note=Pfam match to entry PF01032 FecCD_family%2C FecCD transport family%2C score 228.80%2C E-value 8.1e-65;gbkey=misc_feature;gene=SC10G8.26c
NC_003888.3	RefSeq	gene	8212293	8213276	.	-	.	ID=gene7462;Dbxref=GeneID:1102837;Name=SC10G8.27c;gbkey=Gene;gene=SC10G8.27c;gene_biotype=protein_coding;gene_synonym=SC10G8.27c;locus_tag=SCO7399
NC_003888.3	RefSeq	CDS	8212293	8213276	.	-	0	ID=cds7328;Parent=gene7462;Dbxref=Genbank:NP_631449.1,GeneID:1102837;Name=NP_631449.1;Note=SC10G8.27c%2C possible binding-protein-dependent transport lipoprotein%2C len: 327 aa. Similar to many including: Escherichia coli SW:FHUD_ECOLI(EMBL:X05810) ferrichrome-binding periplasmic protein precursor FhuD (296 aa)%2C fasta scores opt: 231 z-score: 249.9 E(): 1.7e-06 24.8%25 identity in 270 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains a Pfam match to entry PF01497 Peripla_BP_2%2C Periplasmic binding protein.;gbkey=CDS;gene=SC10G8.27c;product=binding-protein-dependent transport lipoprotein;protein_id=NP_631449.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8212362	8213117	.	-	.	ID=id9569;Dbxref=GeneID:1102837;Note=Pfam match to entry PF01497 Peripla_BP_2%2C Periplasmic binding protein%2C score 55.60%2C E-value 1.1e-12;gbkey=misc_feature;gene=SC10G8.27c
NC_003888.3	RefSeq	sequence_feature	8213214	8213246	.	-	.	ID=id9570;Dbxref=GeneID:1102837;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=SC10G8.27c
NC_003888.3	RefSeq	gene	8213273	8214151	.	-	.	ID=gene7463;Dbxref=GeneID:1102838;Name=SC10G8.28c;gbkey=Gene;gene=SC10G8.28c;gene_biotype=protein_coding;gene_synonym=SC10G8.28c;locus_tag=SCO7400
NC_003888.3	RefSeq	CDS	8213273	8214151	.	-	0	ID=cds7329;Parent=gene7463;Dbxref=Genbank:NP_631450.1,GeneID:1102838;Name=NP_631450.1;gbkey=CDS;gene=SC10G8.28c;product=ABC transporter ATP-binding protein;protein_id=NP_631450.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8213459	8214025	.	-	.	ID=id9571;Dbxref=GeneID:1102838;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 158.50%2C E-value 1.1e-43;gbkey=misc_feature;gene=SC10G8.28c
NC_003888.3	RefSeq	sequence_feature	8213645	8213689	.	-	.	ID=id9572;Dbxref=GeneID:1102838;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC10G8.28c
NC_003888.3	RefSeq	sequence_feature	8213981	8214004	.	-	.	ID=id9573;Dbxref=GeneID:1102838;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC10G8.28c
NC_003888.3	RefSeq	gene	8214255	8214824	.	-	.	ID=gene7464;Dbxref=GeneID:1102839;Name=SC10G8.29c;gbkey=Gene;gene=SC10G8.29c;gene_biotype=protein_coding;gene_synonym=SC10G8.29c;locus_tag=SCO7401
NC_003888.3	RefSeq	CDS	8214255	8214824	.	-	0	ID=cds7330;Parent=gene7464;Dbxref=Genbank:NP_631451.1,GeneID:1102839;Name=NP_631451.1;Note=SC10G8.29c%2C unknown%2C len: 189 aa. Similar to Deinococcus radiodurans TR:AAF11944 (EMBL:AE002070) Conserved hypothetical protein (200 aa)%2C fasta scores opt: 394 z-score: 504.8 E(): 1.1e-20 42.9%25 identity in 156 aa overlap;gbkey=CDS;gene=SC10G8.29c;product=hypothetical protein;protein_id=NP_631451.1;transl_table=11
NC_003888.3	RefSeq	gene	8214910	8216082	.	-	.	ID=gene7465;Dbxref=GeneID:1102840;Name=SC10G8.30c;gbkey=Gene;gene=SC10G8.30c;gene_biotype=protein_coding;gene_synonym=SC10G8.30c;locus_tag=SCO7402
NC_003888.3	RefSeq	CDS	8214910	8216082	.	-	0	ID=cds7331;Parent=gene7465;Dbxref=Genbank:NP_631452.1,GeneID:1102840;Name=NP_631452.1;Note=SC10G8.30c%2C possible lyase%2C len: 390 aa. Weakly similar to Bacillus subtilis SW:SPL_BACSU(EMBL:L08809) spore photoproduct lyase (EC 4.1.99.-)%2C SplB (342 aa)%2C fasta scores opt: 285 z-score: 328.4 E(): 7.1e-11 26.8%25 identity in 347 aa overlap.;gbkey=CDS;gene=SC10G8.30c;product=lyase;protein_id=NP_631452.1;transl_table=11
NC_003888.3	RefSeq	gene	8216238	8216423	.	+	.	ID=gene7466;Dbxref=GeneID:1102841;Name=SC10G8.31;gbkey=Gene;gene=SC10G8.31;gene_biotype=protein_coding;gene_synonym=SC10G8.31;locus_tag=SCO7403
NC_003888.3	RefSeq	CDS	8216238	8216423	.	+	0	ID=cds7332;Parent=gene7466;Dbxref=Genbank:NP_631453.1,GeneID:1102841;Name=NP_631453.1;Note=SC10G8.31%2C membrane protein%2C len: 61 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10G8.31;product=hypothetical protein;protein_id=NP_631453.1;transl_table=11
NC_003888.3	RefSeq	gene	8216457	8217248	.	-	.	ID=gene7467;Dbxref=GeneID:1102842;Name=SC10G8.32c;gbkey=Gene;gene=SC10G8.32c;gene_biotype=protein_coding;gene_synonym=SC10G8.32c;locus_tag=SCO7404
NC_003888.3	RefSeq	CDS	8216457	8217248	.	-	0	ID=cds7333;Parent=gene7467;Dbxref=Genbank:NP_631454.1,GeneID:1102842;Name=NP_631454.1;Note=SC10G8.32c%2C unknown%2C len: 263 aa. Highly similar to a number of proteins of undefined function from Streptomyces coelicolor including: TR:O86541 (EMBL:AL031350) SC1F3.04 (261 aa)%2C fasta scores opt: 1155 z-score: 1354.8 E():0 67.9%25 identity in 262 aa overlap and TR:O86718 (EMBL:AL031515) SC5C7.21C (271 aa)%2C fasta scores opt: 894 z-score: 1050.3 E(): 0 54.0%25 identity in 272 aa overlap.;gbkey=CDS;gene=SC10G8.32c;product=hypothetical protein;protein_id=NP_631454.1;transl_table=11
NC_003888.3	RefSeq	gene	8217360	8218007	.	-	.	ID=gene7468;Dbxref=GeneID:1102843;Name=SC10G8.33c;gbkey=Gene;gene=SC10G8.33c;gene_biotype=protein_coding;gene_synonym=SC10G8.33c,SC6D11.01c;locus_tag=SCO7405
NC_003888.3	RefSeq	CDS	8217360	8218007	.	-	0	ID=cds7334;Parent=gene7468;Dbxref=Genbank:NP_733732.1,GeneID:1102843;Name=NP_733732.1;Note=SC6D11.01c%2C possible acetyltransferase%2C partial CDS%2C len: > 72 aa. Similar to the N-terminus of Escherichia coli SW:THGA_ECOLI(EMBL:J01636) galactoside O-acetyltransferase (EC 2.3.1.18) (203 aa)%2C fasta scores opt: 138 z-score: 187.9 E(): 0.0048 38.3%25 identity in 60 aa overlap. Overlaps and extends into CDS SC10G8.33c on the adjoining cosmid.~SC10G8.33c%2C possible acetyltransferase%2C partial CDS%2C len: > 175 aa. Highly similar to a number of acetyltransferases e.g. Escherichia coli SW:THGA_ECOLI(EMBL:J01636) galactoside o-acetyltransferase (EC 2.3.1.18) LacA (203 aa)%2C fasta scores opt: 592 z-score: 679.4 E(): 2e-30 48.8%25 identity in 160 aa overlap. Contains a Prosite hit to PS00101 Hexapeptide-repeat containing-transferases signature and a Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats).;gbkey=CDS;gene=SC10G8.33c;product=acetyltransferase;protein_id=NP_733732.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8217480	8217584	.	-	.	ID=id9574;Dbxref=GeneID:1102843;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 62.90%2C E-value 5e-16;gbkey=misc_feature;gene=SC10G8.33c
NC_003888.3	RefSeq	sequence_feature	8217480	8217566	.	-	.	ID=id9575;Dbxref=GeneID:1102843;Note=PS00101 Hexapeptide-repeat containing-transferases signature;gbkey=misc_feature;gene=SC10G8.33c
NC_003888.3	RefSeq	ribosome_entry_site	8218013	8218017	.	-	.	ID=id9576;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	8218036	8218086	.	-	.	ID=id9577;Note=stem loop with 100%25 matches over 19 bases and a loop region of 13 bases.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8218101	8220176	.	-	.	ID=gene7469;Dbxref=GeneID:1102844;Name=SC6D11.02c;gbkey=Gene;gene=SC6D11.02c;gene_biotype=protein_coding;gene_synonym=SC6D11.02c;locus_tag=SCO7406
NC_003888.3	RefSeq	CDS	8218101	8220176	.	-	0	ID=cds7335;Parent=gene7469;Dbxref=Genbank:NP_631455.1,GeneID:1102844;Name=NP_631455.1;Note=SC6D11.02C%2C possible hypothetical protein%2C len: 691 aa. Contains a 8xGT repeat region within the C-terminus and a possible N-terminal signal sequence.;gbkey=CDS;gene=SC6D11.02c;product=hypothetical protein;protein_id=NP_631455.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8218434	8218481	.	-	.	ID=id9578;Dbxref=GeneID:1102844;Note=repeat region containing 8xGGCACC repeats.;gbkey=repeat_region;gene=SC6D11.02c
NC_003888.3	RefSeq	gene	8220304	8222349	.	-	.	ID=gene7470;Dbxref=GeneID:1102845;Name=SC6D11.03c;gbkey=Gene;gene=SC6D11.03c;gene_biotype=protein_coding;gene_synonym=SC6D11.03c;locus_tag=SCO7407
NC_003888.3	RefSeq	CDS	8220304	8222349	.	-	0	ID=cds7336;Parent=gene7470;Dbxref=Genbank:NP_631456.1,GeneID:1102845;Name=NP_631456.1;Note=SC6D11.03c%2C probable beta-galactosidase%2C len: 681 aa. Similar to many beta-galactosidases e.g. Bacillus stearothermophilus SW:BGAL_BACST(EMBL:M13466) beta-galactosidase I (EC 3.2.1.23)%2C BgaB%2C (672 aa)%2C fasta scores opt: 1816 z-score: 2079.7 E(): 0 43.2%25 identity in 666 aa overlap.;gbkey=CDS;gene=SC6D11.03c;product=beta-galactosidase;protein_id=NP_631456.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8222355	8222359	.	-	.	ID=id9579;gbkey=RBS
NC_003888.3	RefSeq	gene	8222376	8223731	.	-	.	ID=gene7471;Dbxref=GeneID:1102846;Name=SC6D11.04c;gbkey=Gene;gene=SC6D11.04c;gene_biotype=protein_coding;gene_synonym=SC6D11.04c;locus_tag=SCO7408
NC_003888.3	RefSeq	CDS	8222376	8223731	.	-	0	ID=cds7337;Parent=gene7471;Dbxref=Genbank:NP_631457.1,GeneID:1102846;Name=NP_631457.1;Note=SC6D11.04c%2C probable solute-binding lipoprotein%2C len: 451 aa. Similar to several other transport proteins including: Agrobacterium radiobacter SW:LACE_AGRRD(EMBL:X66596) lactose-binding protein precursor%2C LacE (422 aa)%2C fasta scores opt: 347 z-score: 393.9 E(): 1.6e-14 24.0%25 identity in 425 aa overlap and Streptomyces coelicolor TR:CAB61177(EMBL:AL132973) probable solute-binding lipoprotein%2C SCF91.20 (443 aa)%2C fasta scores opt: 550 z-score: 621.9 E(): 3.2e-27 26.2%25 identity in 455 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains a Prosite hit to PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature and a Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein.;gbkey=CDS;gene=SC6D11.04c;product=solute-binding lipoprotein;protein_id=NP_631457.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8222433	8223269	.	-	.	ID=id9580;Dbxref=GeneID:1102846;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 56.40%2C E-value 6.1e-13;gbkey=misc_feature;gene=SC6D11.04c
NC_003888.3	RefSeq	sequence_feature	8223198	8223251	.	-	.	ID=id9581;Dbxref=GeneID:1102846;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature;gbkey=misc_feature;gene=SC6D11.04c
NC_003888.3	RefSeq	sequence_feature	8223645	8223677	.	-	.	ID=id9582;Dbxref=GeneID:1102846;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6D11.04c
NC_003888.3	RefSeq	gene	8223827	8224777	.	-	.	ID=gene7472;Dbxref=GeneID:1102847;Name=SC6D11.05c;gbkey=Gene;gene=SC6D11.05c;gene_biotype=protein_coding;gene_synonym=SC6D11.05c;locus_tag=SCO7409
NC_003888.3	RefSeq	CDS	8223827	8224777	.	-	0	ID=cds7338;Parent=gene7472;Dbxref=Genbank:NP_631458.1,GeneID:1102847;Name=NP_631458.1;Note=SC6D11.05c%2C possible binding-protein dependent transport protein%2C len: 316 aa. Similar to many including: Streptomyces coelicolor TR:CAB61179(EMBL:AL132973) binding protein dependent transport protein%2C SCF91.22 (287 aa)%2C fasta scores opt: 875 z-score: 1002.5 E(): 0 45.9%25 identity in 281 aa overlap. Contains possible membrane spanning hydrophobic domains and a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=CDS;gene=SC6D11.05c;product=binding-protein dependent transport protein;protein_id=NP_631458.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8223965	8224195	.	-	.	ID=id9583;Dbxref=GeneID:1102847;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 71.40%2C E-value 1.9e-17;gbkey=misc_feature;gene=SC6D11.05c
NC_003888.3	RefSeq	gene	8224785	8225711	.	-	.	ID=gene7473;Dbxref=GeneID:1102848;Name=SC6D11.06c;gbkey=Gene;gene=SC6D11.06c;gene_biotype=protein_coding;gene_synonym=SC6D11.06c;locus_tag=SCO7410
NC_003888.3	RefSeq	CDS	8224785	8225711	.	-	0	ID=cds7339;Parent=gene7473;Dbxref=Genbank:NP_631459.1,GeneID:1102848;Name=NP_631459.1;Note=SC6D11.06c%2C possible binding-protein dependent transport protein%2C len: 308 aa. Similar to many other transport proteins e.g. Streptomyces coelicolor TR:CAB61178(EMBL:AL132973) binding protein dependent transport protein%2C SCF91.21 (328 aa)%2C fasta scores opt: 622 z-score: 709.6 E(): 4.2e-32 35.9%25 identity in 315 aa overlap. Contains possible membrane spanning hydrophobic domains and a Prosite hit to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=CDS;gene=SC6D11.06c;product=binding-protein dependent transport protein;protein_id=NP_631459.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8224908	8225132	.	-	.	ID=id9584;Dbxref=GeneID:1102848;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 31.40%2C E-value 2e-05;gbkey=misc_feature;gene=SC6D11.06c
NC_003888.3	RefSeq	sequence_feature	8225043	8225129	.	-	.	ID=id9585;Dbxref=GeneID:1102848;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC6D11.06c
NC_003888.3	RefSeq	gene	8225904	8226962	.	+	.	ID=gene7474;Dbxref=GeneID:1102849;Name=SC6D11.07;gbkey=Gene;gene=SC6D11.07;gene_biotype=protein_coding;gene_synonym=SC6D11.07;locus_tag=SCO7411
NC_003888.3	RefSeq	CDS	8225904	8226962	.	+	0	ID=cds7340;Parent=gene7474;Dbxref=Genbank:NP_631460.1,GeneID:1102849;Name=NP_631460.1;Note=SC6D11.07%2C possible LacI-family transcriptional regulator%2C len: 352 aa. Similar to several including Escherichia coli SW:LACI_ECOLI (EMBL:V00294) lactose operon repressor LacI (360 aa)%2C fasta scores opt: 595 z-score: 670.0 E(): 6.7e-30 34.8%25 identity in 333 aa overlap and Streptomyces coelicolor TR:O86618 (EMBL:AL031155)  transcriptional regulator SC3A7.17 (361 aa)%2C fasta scores opt: 887 z-score: 995.3 E(): 0 46.0%25 identity in 350 aa overlap. Contains Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family. Possesses a helix-turn-helix motif situated between residues 23..44.;gbkey=CDS;gene=SC6D11.07;product=LacI family transcriptional regulator;protein_id=NP_631460.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8225964	8226047	.	+	.	ID=id9586;Dbxref=GeneID:1102849;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 32.80%2C E-value 9.5e-08;gbkey=misc_feature;gene=SC6D11.07
NC_003888.3	RefSeq	sequence_feature	8226138	8226854	.	+	.	ID=id9587;Dbxref=GeneID:1102849;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 70.10%2C E-value 4.5e-17;gbkey=misc_feature;gene=SC6D11.07
NC_003888.3	RefSeq	gene	8227072	8228874	.	+	.	ID=gene7475;Dbxref=GeneID:1102850;Name=SC6D11.08;gbkey=Gene;gene=SC6D11.08;gene_biotype=protein_coding;gene_synonym=SC6D11.08;locus_tag=SCO7412
NC_003888.3	RefSeq	CDS	8227072	8228874	.	+	0	ID=cds7341;Parent=gene7475;Dbxref=Genbank:NP_631461.1,GeneID:1102850;Name=NP_631461.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;gene=SC6D11.08;product=thiamine pyrophosphate protein;protein_id=NP_631461.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8227105	8228703	.	+	.	ID=id9588;Dbxref=GeneID:1102850;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes%2C score 340.80%2C E-value 2.4e-105;gbkey=misc_feature;gene=SC6D11.08
NC_003888.3	RefSeq	sequence_feature	8228344	8228403	.	+	.	ID=id9589;Dbxref=GeneID:1102850;Note=PS00187 Thiamine pyrophosphate enzymes signature;gbkey=misc_feature;gene=SC6D11.08
NC_003888.3	RefSeq	gene	8228871	8229902	.	+	.	ID=gene7476;Dbxref=GeneID:1102851;Name=SC6D11.09;gbkey=Gene;gene=SC6D11.09;gene_biotype=protein_coding;gene_synonym=SC6D11.09;locus_tag=SCO7413
NC_003888.3	RefSeq	CDS	8228871	8229902	.	+	0	ID=cds7342;Parent=gene7476;Dbxref=Genbank:NP_631462.1,GeneID:1102851;Name=NP_631462.1;Note=SC6D11.09%2C possible oxidoreductase%2C len: 343 aa. Highly similar to many oxidoreductases including: Mycobacterium tuberculosis TR:O53398(EMBL:AL021897) oxidoreductase (301 aa)%2C fasta scores opt: 405 z-score: 443.2 E(): 2.9e-17 36.2%25 identity in 257 aa overlap. Contains a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=CDS;gene=SC6D11.09;product=short chain dehydrogenase;protein_id=NP_631462.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8228895	8229455	.	+	.	ID=id9590;Dbxref=GeneID:1102851;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 164.00%2C E-value 2.5e-45;gbkey=misc_feature;gene=SC6D11.09
NC_003888.3	RefSeq	sequence_feature	8229300	8229386	.	+	.	ID=id9591;Dbxref=GeneID:1102851;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=SC6D11.09
NC_003888.3	RefSeq	gene	8229906	8230712	.	-	.	ID=gene7477;Dbxref=GeneID:1102852;Name=SC6D11.10;gbkey=Gene;gene=SC6D11.10;gene_biotype=protein_coding;gene_synonym=SC6D11.10;locus_tag=SCO7414
NC_003888.3	RefSeq	CDS	8229906	8230712	.	-	0	ID=cds7343;Parent=gene7477;Dbxref=Genbank:NP_631463.1,GeneID:1102852;Name=NP_631463.1;Note=SC6D11.10%2C possible integral membrane protein%2C len: 268 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6D11.10;product=hypothetical protein;protein_id=NP_631463.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8230718	8230722	.	-	.	ID=id9592;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8230854	8230858	.	+	.	ID=id9593;gbkey=RBS
NC_003888.3	RefSeq	gene	8230865	8232022	.	+	.	ID=gene7478;Dbxref=GeneID:1102853;Name=SC6D11.11;gbkey=Gene;gene=SC6D11.11;gene_biotype=protein_coding;gene_synonym=SC6D11.11;locus_tag=SCO7415
NC_003888.3	RefSeq	CDS	8230865	8232022	.	+	0	ID=cds7344;Parent=gene7478;Dbxref=Genbank:NP_631464.1,GeneID:1102853;Name=NP_631464.1;Note=SC6D11.11%2C possible racemase%2C len: 385 aa. Weakly similar to many racemases including: Pseudomonas putida SW:MANR_PSEPU(EMBL:M19043) mandelate racemase (EC 5.1.2.2) (359 aa)%2C fasta scores opt: 315 z-score: 373.7 E(): 2.1e-13 26.4%25 identity in 371 aa overlap and Streptomyces coelicolor TR:CAB55709(EMBL:AL117387) possible racemase%2C SCF41.06 (416 aa)%2C fasta scores opt: 383 z-score: 452.6 E(): 8.7e-18 31.0%25 identity in 371 aa overlap. Contains a Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family.;gbkey=CDS;gene=SC6D11.11;product=racemase;protein_id=NP_631464.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8230970	8231935	.	+	.	ID=id9594;Dbxref=GeneID:1102853;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family%2C score 73.30%2C E-value 5e-18;gbkey=misc_feature;gene=SC6D11.11
NC_003888.3	RefSeq	gene	8232052	8232456	.	-	.	ID=gene7479;Dbxref=GeneID:1102854;Name=SC6D11.12c;gbkey=Gene;gene=SC6D11.12c;gene_biotype=protein_coding;gene_synonym=SC6D11.12c;locus_tag=SCO7416
NC_003888.3	RefSeq	CDS	8232052	8232456	.	-	0	ID=cds7345;Parent=gene7479;Dbxref=Genbank:NP_631465.1,GeneID:1102854;Name=NP_631465.1;Note=SC6D11.12c%2C unknown%2C len: 134 aa.;gbkey=CDS;gene=SC6D11.12c;product=hypothetical protein;protein_id=NP_631465.1;transl_table=11
NC_003888.3	RefSeq	gene	8232555	8233778	.	-	.	ID=gene7480;Dbxref=GeneID:1102855;Name=SC6D11.13c;gbkey=Gene;gene=SC6D11.13c;gene_biotype=protein_coding;gene_synonym=SC6D11.13c;locus_tag=SCO7417
NC_003888.3	RefSeq	CDS	8232555	8233778	.	-	0	ID=cds7346;Parent=gene7480;Dbxref=Genbank:NP_631466.1,GeneID:1102855;Name=NP_631466.1;Note=SC6D11.13c%2C possible cytochrome P450-family protein%2C len: 407 aa. Similar to many members of the cytochrome P450 family including: Streptomyces griseus SW:CPXH_STRGR (EMBL:X63601) cytochrome P450-soy (412 aa)%2C fasta scores opt: 673 z-score: 761.0 E():0 35.1%25 identity in 382 aa overlap and Saccharopolyspora erythraea (Streptomyces erythraeus) SW:CPXK_SACER (EMBL:M83110) cytochrome P450 107B1 (405 aa)%2C fasta scores opt: 872 z-score: 984.9 E():0 38.4%25 identity in 409 aa overlap. Contains a Prosite hit to PS00086 Cytochrome P450 cysteine heme-iron ligand signature and a Pfam match to entry PF00067 p450%2C Cytochrome P450.;gbkey=CDS;gene=SC6D11.13c;product=cytochrome P450-family protein;protein_id=NP_631466.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8232558	8233691	.	-	.	ID=id9595;Dbxref=GeneID:1102855;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 185.40%2C E-value 8.8e-52;gbkey=misc_feature;gene=SC6D11.13c
NC_003888.3	RefSeq	sequence_feature	8232708	8232737	.	-	.	ID=id9596;Dbxref=GeneID:1102855;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SC6D11.13c
NC_003888.3	RefSeq	gene	8233775	8235016	.	-	.	ID=gene7481;Dbxref=GeneID:1102856;Name=SC6D11.14c;gbkey=Gene;gene=SC6D11.14c;gene_biotype=protein_coding;gene_synonym=SC6D11.14c;locus_tag=SCO7418
NC_003888.3	RefSeq	CDS	8233775	8235016	.	-	0	ID=cds7347;Parent=gene7481;Dbxref=Genbank:NP_631467.1,GeneID:1102856;Name=NP_631467.1;Note=SC6D11.14c%2C possible cytochrome P450-family protein%2C len: 413 aa. Similar to many members of the cytochrome P450 family including: Saccharopolyspora erythraea (Streptomyces erythraeus) SW:CPXK_SACER(EMBL:M83110) cytochrome P450 107B1 (405 aa)%2C fasta scores opt: 491 z-score: 571.3 E(): 2.1e-24 28.9%25 identity in 395 aa overlap and Streptomyces coelicolor TR:CAB61278(EMBL:AL132991) cytochrome P450%2C SCF55.08c (420 aa)%2C fasta scores opt: 1375 z-score: 1593.6 E():0 51.7%25 identity in 404 aa overlap.;gbkey=CDS;gene=SC6D11.14c;product=cytochrome P450-family protein;protein_id=NP_631467.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8233788	8233792	.	-	.	ID=id9597;Dbxref=GeneID:1102856;gbkey=RBS;gene=SC6D11.14c
NC_003888.3	RefSeq	gene	8235013	8235564	.	-	.	ID=gene7482;Dbxref=GeneID:1102857;Name=cvnD10;gbkey=Gene;gene=cvnD10;gene_biotype=protein_coding;gene_synonym=cvnD10,SC6D11.15c;locus_tag=SCO7419
NC_003888.3	RefSeq	CDS	8235013	8235564	.	-	0	ID=cds7348;Parent=gene7482;Dbxref=Genbank:NP_631468.1,GeneID:1102857;Name=NP_631468.1;Note=SC6D11.15c%2C cvnD10%2C possible ATP/GTP binding protein%2C len: 183 aa. Highly similar to many Streptomyces coelicolor ATP/GTP binding proteins e.g. TR:CAB61279 (EMBL:AL132991) SCF55.09c (178 aa)%2C fasta scores opt: 805 z-score: 986.9 E():0 73.7%25 identity in 167 aa overlap and TR:CAB59480 (EMBL:AL132648) SCI41.10c (176 aa)%2C fasta scores opt: 645 z-score: 793.2 E():0 61.3%25 identity in 168 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=cvnD10;product=ATP/GTP binding protein;protein_id=NP_631468.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8235022	8235026	.	-	.	ID=id9598;Dbxref=GeneID:1102857;gbkey=RBS;gene=cvnD10
NC_003888.3	RefSeq	sequence_feature	8235532	8235555	.	-	.	ID=id9599;Dbxref=GeneID:1102857;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD10
NC_003888.3	RefSeq	gene	8235635	8235982	.	-	.	ID=gene7483;Dbxref=GeneID:1102858;Name=cvnC10;gbkey=Gene;gene=cvnC10;gene_biotype=protein_coding;gene_synonym=cvnC10,SC6D11.16c;locus_tag=SCO7420
NC_003888.3	RefSeq	CDS	8235635	8235982	.	-	0	ID=cds7349;Parent=gene7483;Dbxref=Genbank:NP_631469.1,GeneID:1102858;Name=NP_631469.1;Note=SC6D11.16c%2C cvnC10%2C unknown%2C len: 115 aa. Highly similar to many proteins of undefined function from Streptomyces coelicolor including: TR:CAB61280 (EMBL:AL132991) SCF55.10c. (113 aa)%2C fasta scores opt: 407 z-score: 530.3 E(): 4.1e-22 63.1%25 identity in 111 aa overlap and TR:Q9X834 (EMBL:AL049727) SC9B1.14C (119 aa)%2C fasta scores opt: 249 z-score: 330.7 E(): 5.3e-11 46.2%25 identity in 117 aa overlap.;gbkey=CDS;gene=cvnC10;product=hypothetical protein;protein_id=NP_631469.1;transl_table=11
NC_003888.3	RefSeq	gene	8235979	8236386	.	-	.	ID=gene7484;Dbxref=GeneID:1102859;Name=cvnB10;gbkey=Gene;gene=cvnB10;gene_biotype=protein_coding;gene_synonym=cvnB10,SC6D11.17c;locus_tag=SCO7421
NC_003888.3	RefSeq	CDS	8235979	8236386	.	-	0	ID=cds7350;Parent=gene7484;Dbxref=Genbank:NP_631470.1,GeneID:1102859;Name=NP_631470.1;Note=SC6D11.17c%2C cvnB10%2C unknown%2C len: 135 aa. Highly similar to many proteins of undefined function from Streptomyces coelicolor including: TR:CAB61281 (EMBL:AL132991) SCF55.11c (152 aa)%2C fasta scores opt: 634 z-score: 769.3 E():0 71.9%25 identity in 128 aa overlap and TR:Q9X835(EMBL:AL049727) SC9B1.15C (139 aa)%2C fasta scores opt: 329 z-score: 407.1 E(): 3e-15 40.9%25 identity in 132 aa overlap;gbkey=CDS;gene=cvnB10;product=hypothetical protein;protein_id=NP_631470.1;transl_table=11
NC_003888.3	RefSeq	gene	8236383	8238014	.	-	.	ID=gene7485;Dbxref=GeneID:1102860;Name=cvnA10;gbkey=Gene;gene=cvnA10;gene_biotype=protein_coding;gene_synonym=cvnA10,SC6D11.18c;locus_tag=SCO7422
NC_003888.3	RefSeq	CDS	8236383	8238014	.	-	0	ID=cds7351;Parent=gene7485;Dbxref=Genbank:NP_631471.1,GeneID:1102860;Name=NP_631471.1;Note=SC6D11.18c%2C cvnA10%2C possible sensor histidine-kinase%2C len: 543 aa. Similar to several from Streptomyces coelicolor including: TR:CAB61282 (EMBL:AL132991) sensor kinase%2C SCF55.12c (575 aa)%2C fasta scores opt: 969 z-score: 843.9 E(): 0 42.9%25 identity in 501 aa overlap and TR:CAB59483 (EMBL:AL132648) integral membrane protein%2C SCI41.13c (541 aa)%2C fasta scores opt: 630 z-score: 552.6 E(): 2.3e-23 32.9%25 identity in 559 aa overlap. Contains a Pfam match to entry PF00512 signal%2C Histidine kinase and a possible hydrophobic membrane spanning regions;gbkey=CDS;gene=cvnA10;product=sensor histidine-kinase;protein_id=NP_631471.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8236944	8237531	.	-	.	ID=id9600;Dbxref=GeneID:1102860;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score -40.20%2C E-value 0.0075;gbkey=misc_feature;gene=cvnA10
NC_003888.3	RefSeq	gene	8238152	8238862	.	-	.	ID=gene7486;Dbxref=GeneID:1102861;Name=SC6D11.19c;gbkey=Gene;gene=SC6D11.19c;gene_biotype=protein_coding;gene_synonym=SC6D11.19c;locus_tag=SCO7423
NC_003888.3	RefSeq	CDS	8238152	8238862	.	-	0	ID=cds7352;Parent=gene7486;Dbxref=Genbank:NP_631472.1,GeneID:1102861;Name=NP_631472.1;Note=SC6D11.19c%2C unknown%2C len: 236 aa. Weakly similar to a protein of undefined function from Rhodococcus rhodochrous plasmid pKA22 TR:Q9XBN0(EMBL:AF165152) hypothetical 25.4 KD protein (242 aa)%2C fasta scores opt: 336 z-score: 419.4 E(): 6.1e-16 33.0%25 identity in 209 aa overlap.;gbkey=CDS;gene=SC6D11.19c;product=hypothetical protein;protein_id=NP_631472.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8238870	8238874	.	-	.	ID=id9601;gbkey=RBS
NC_003888.3	RefSeq	gene	8238961	8239428	.	+	.	ID=gene7487;Dbxref=GeneID:1102862;Name=SC6D11.20;gbkey=Gene;gene=SC6D11.20;gene_biotype=protein_coding;gene_synonym=SC6D11.20;locus_tag=SCO7424
NC_003888.3	RefSeq	CDS	8238961	8239428	.	+	0	ID=cds7353;Parent=gene7487;Dbxref=Genbank:NP_631473.1,GeneID:1102862;Name=NP_631473.1;Note=SC6D11.20%2C possible MarR-family transcriptional regulator%2C len: 155 aa. Weakly similar to Streptomyces coelicolor TR:CAB56677 (EMBL:AL121596) MarR-family protein%2C SCF51A.25 (148 aa)%2C fasta scores opt: 209 z-score: 254.7 E(): 9.1e-07 33.1%25 identity in 124 aa overlap. Contains a Pfam match to entry PF01047 MarR%2C MarR family with the  helix-turn-helix motif situated between residues 53..74 (+4.29 SD).;gbkey=CDS;gene=SC6D11.20;product=MarR family transcriptional regulator;protein_id=NP_631473.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8239066	8239377	.	+	.	ID=id9602;Dbxref=GeneID:1102862;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 79.60%2C E-value 6.3e-20;gbkey=misc_feature;gene=SC6D11.20
NC_003888.3	RefSeq	ribosome_entry_site	8239410	8239414	.	+	.	ID=id9603;Dbxref=GeneID:1102862;gbkey=RBS;gene=SC6D11.20
NC_003888.3	RefSeq	gene	8239425	8241158	.	+	.	ID=gene7488;Dbxref=GeneID:1102863;Name=SC6D11.21;gbkey=Gene;gene=SC6D11.21;gene_biotype=protein_coding;gene_synonym=SC6D11.21;locus_tag=SCO7425
NC_003888.3	RefSeq	CDS	8239425	8241158	.	+	0	ID=cds7354;Parent=gene7488;Dbxref=Genbank:NP_631474.1,GeneID:1102863;Name=NP_631474.1;Note=SC6D11.21%2C possible multidrug-efflux transporter%2C len: 577 aa. Highly similar to several including: Streptomyces virginiae TR:Q9XE01(EMBL:AB019519) virginiamycin S resistance protein%2C VarS (518 aa)%2C fasta scores opt: 322 z-score: 328.6 E(): 7e-11 25.7%25 identity in 536 aa overlap and Deinococcus radiodurans TR:AAF11851(EMBL:AE002062) multidrug-efflux transporter%2C (410 aa)%2C fasta scores opt: 937 z-score: 945.6 E(): 0 41.3%25 identity in 395 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6D11.21;product=multidrug-efflux transporter;protein_id=NP_631474.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8239485	8240624	.	+	.	ID=id9604;Dbxref=GeneID:1102863;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -98.80%2C E-value 0.0024;gbkey=misc_feature;gene=SC6D11.21
NC_003888.3	RefSeq	gene	8241248	8241685	.	-	.	ID=gene7489;Dbxref=GeneID:1102864;Name=SC6D11.22c;gbkey=Gene;gene=SC6D11.22c;gene_biotype=protein_coding;gene_synonym=SC6D11.22c;locus_tag=SCO7426
NC_003888.3	RefSeq	CDS	8241248	8241685	.	-	0	ID=cds7355;Parent=gene7489;Dbxref=Genbank:NP_631475.1,GeneID:1102864;Name=NP_631475.1;Note=SC6D11.22c%2C unknown%2C len: 145 aa.;gbkey=CDS;gene=SC6D11.22c;product=hypothetical protein;protein_id=NP_631475.1;transl_table=11
NC_003888.3	RefSeq	gene	8241835	8242281	.	+	.	ID=gene7490;Dbxref=GeneID:1102865;Name=SC6D11.23;gbkey=Gene;gene=SC6D11.23;gene_biotype=protein_coding;gene_synonym=SC6D11.23;locus_tag=SCO7427
NC_003888.3	RefSeq	CDS	8241835	8242281	.	+	0	ID=cds7356;Parent=gene7490;Dbxref=Genbank:NP_631476.1,GeneID:1102865;Name=NP_631476.1;Note=SC6D11.23%2C unknown%2C len: 148 aa. Similar to several proteins of undefined function e.g. Vibrio parahaemolyticus SW:YJEB_VIBPA(EMBL:U09005) hypothetical 15.6 KD protein (141 aa)%2C fasta scores opt: 292 z-score: 356.7 E(): 1.9e-12 39.7%25 identity in 146 aa overlap.;gbkey=CDS;gene=SC6D11.23;product=hypothetical protein;protein_id=NP_631476.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8242345	8242349	.	+	.	ID=id9605;gbkey=RBS
NC_003888.3	RefSeq	gene	8242355	8243551	.	+	.	ID=gene7491;Dbxref=GeneID:1102866;Name=hmpA1;gbkey=Gene;gene=hmpA1;gene_biotype=protein_coding;gene_synonym=hmpA1;locus_tag=SCO7428
NC_003888.3	RefSeq	CDS	8242355	8243551	.	+	0	ID=cds7357;Parent=gene7491;Dbxref=Genbank:NP_631477.1,GeneID:1102866;Name=NP_631477.1;Note=SC6D11.24%2C hmpA1%2C possible flavohemoprotein%2C len: 398 aa. Highly similar to many protein of the flavohemoprotein subfamily%2C including: Escherichia coli SW:HMPA_ECOLI(EMBL:X58872) flavohemoprotein (hemoglobin-like protein) (396 aa)%2C fasta scores: opt: 826 z-score: 935.2 E():0 39.4%25 identity in 404 aa overlap and Erwinia chrysanthemi SW:HMPA_ERWCH (EMBL:X75893) flavohemoprotein (395 aa)%2C fasta scores: opt: 761 z-score: 862.0 E():0 35.9%25 identity in 404 aa overlap. Contains Pfam matches to entries Pfam match to entry PF00042 globin%2C Globin and Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain.;gbkey=CDS;gene=hmpA1;product=flavohemoprotein;protein_id=NP_631477.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8242355	8242777	.	+	.	ID=id9606;Dbxref=GeneID:1102866;Note=Pfam match to entry PF00042 globin%2C Globin%2C score 55.10%2C E-value 1.6e-14;gbkey=misc_feature;gene=hmpA1
NC_003888.3	RefSeq	sequence_feature	8243147	8243476	.	+	.	ID=id9607;Dbxref=GeneID:1102866;Note=Pfam match to entry PF00175 oxidored_fad%2C Oxidoreductase FAD/NAD-binding domain%2C score 51.20%2C E-value 2.3e-11;gbkey=misc_feature;gene=hmpA1
NC_003888.3	RefSeq	gene	8243600	8243950	.	-	.	ID=gene7492;Dbxref=GeneID:1102867;Name=SC6D11.25c;gbkey=Gene;gene=SC6D11.25c;gene_biotype=protein_coding;gene_synonym=SC6D11.25c;locus_tag=SCO7429
NC_003888.3	RefSeq	CDS	8243600	8243950	.	-	0	ID=cds7358;Parent=gene7492;Dbxref=Genbank:NP_631478.1,GeneID:1102867;Name=NP_631478.1;Note=SC6D11.25c%2C unknown%2C len: 116 aa.;gbkey=CDS;gene=SC6D11.25c;product=hypothetical protein;protein_id=NP_631478.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8243956	8243960	.	-	.	ID=id9608;gbkey=RBS
NC_003888.3	RefSeq	gene	8244126	8244812	.	+	.	ID=gene7493;Dbxref=GeneID:1102868;Name=SC6D11.26;gbkey=Gene;gene=SC6D11.26;gene_biotype=protein_coding;gene_synonym=SC6D11.26;locus_tag=SCO7430
NC_003888.3	RefSeq	CDS	8244126	8244812	.	+	0	ID=cds7359;Parent=gene7493;Dbxref=Genbank:NP_631479.1,GeneID:1102868;Name=NP_631479.1;Note=SC6D11.26%2C unknown%2C len: 228 aa. Contains a Pfam match to entry PF01955 DUF105%2C Domain of unknown function.;gbkey=CDS;gene=SC6D11.26;product=hypothetical protein;protein_id=NP_631479.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8244168	8244806	.	+	.	ID=id9609;Dbxref=GeneID:1102868;Note=Pfam match to entry PF01955 DUF105%2C Domain of unknown function%2C score 47.10%2C E-value 4e-10;gbkey=misc_feature;gene=SC6D11.26
NC_003888.3	RefSeq	gene	8244832	8245092	.	-	.	ID=gene7494;Dbxref=GeneID:1102869;Name=SC6D11.27c;gbkey=Gene;gene=SC6D11.27c;gene_biotype=protein_coding;gene_synonym=SC6D11.27c;locus_tag=SCO7431
NC_003888.3	RefSeq	CDS	8244832	8245092	.	-	0	ID=cds7360;Parent=gene7494;Dbxref=Genbank:NP_631480.1,GeneID:1102869;Name=NP_631480.1;Note=SC6D11.27c%2C possible integral membrane protein%2C len: 86 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6D11.27c;product=hypothetical protein;protein_id=NP_631480.1;transl_table=11
NC_003888.3	RefSeq	gene	8245226	8245909	.	-	.	ID=gene7495;Dbxref=GeneID:1102870;Name=mprA2;gbkey=Gene;gene=mprA2;gene_biotype=protein_coding;gene_synonym=mprA2;locus_tag=SCO7432
NC_003888.3	RefSeq	CDS	8245226	8245909	.	-	0	ID=cds7361;Parent=gene7495;Dbxref=Genbank:NP_631481.1,GeneID:1102870;Name=NP_631481.1;Note=SC6D11.28c%2C mprA2%2C  extracellular small neutral protease (EC 3.4.24.-)%2C len: 227 aa. Identical to Streptomyces lividans SW:SNPA_STRLI(EMBL:M81703) extracellular small neutral protease precursor%2C SnpA (227 aa)%2C fasta scores opt: 1483 z-score: 1546.5 E(): 0 100.0%25 identity in 227 aa overlap. Also highly similar to Streptomyces coelicolor SW:SNPA_STRCO(EMBL:Z11929) extracellular small neutral protease precursor%2C MprA (215 aa)%2C fasta scores opt: 854 z-score: 896.8 E():0 65.6%25 identity in 218 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=mprA2;product=extracellular small neutral protease;protein_id=NP_631481.1;transl_table=11
NC_003888.3	RefSeq	gene	8246125	8247111	.	+	.	ID=gene7496;Dbxref=GeneID:1102871;Name=mprR2;gbkey=Gene;gene=mprR2;gene_biotype=protein_coding;gene_synonym=mprR2;locus_tag=SCO7433
NC_003888.3	RefSeq	CDS	8246125	8247111	.	+	0	ID=cds7362;Parent=gene7496;Dbxref=Genbank:NP_631482.1,GeneID:1102871;Name=NP_631482.1;Note=SC6D11.29%2C mprR2%2C small neutral protease regulatory protein%2C len: 328 aa. Almost identical to Streptomyces lividans SW:SNPR_STRLI (EMBL:M81703) small neutral protease regulatory protein (344 aa)%2C fasta scores opt: 2123 z-score: 2481.6 E(): 0 98.5%25 identity in 327 aa overlap. Also highly similar to Streptomyces coelicolor SW:MPRR_STRCO (EMBL:Z11929) small neutral protease regulatory protein%2C MprR (316 aa)%2C fasta scores opt: 1163 z-score: 1362.7 E():0 60.7%25 identity in 323 aa overlap. Contains a Prosite hit to PS00044 Bacterial regulatory proteins%2C lysR family signature and a Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family with the helix-turn-helix motif situated between residues 18..39 (+4.38 SD).;gbkey=CDS;gene=mprR2;product=small neutral protease regulatory protein;protein_id=NP_631482.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8246137	8246553	.	+	.	ID=id9610;Dbxref=GeneID:1102871;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 132.40%2C E-value 8.2e-36;gbkey=misc_feature;gene=mprR2
NC_003888.3	RefSeq	sequence_feature	8246179	8246271	.	+	.	ID=id9611;Dbxref=GeneID:1102871;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=mprR2
NC_003888.3	RefSeq	gene	8247219	8247980	.	+	.	ID=gene7497;Dbxref=GeneID:1102872;Name=SC6D11.30;gbkey=Gene;gene=SC6D11.30;gene_biotype=protein_coding;gene_synonym=SC6D11.30;locus_tag=SCO7434
NC_003888.3	RefSeq	CDS	8247219	8247980	.	+	0	ID=cds7363;Parent=gene7497;Dbxref=Genbank:NP_631483.1,GeneID:1102872;Name=NP_631483.1;Note=SC6D11.30%2C possible lipoprotein%2C len: 253 aa. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC6D11.30;product=lipoprotein;protein_id=NP_631483.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8247273	8247305	.	+	.	ID=id9612;Dbxref=GeneID:1102872;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC6D11.30
NC_003888.3	RefSeq	gene	8248054	8249322	.	-	.	ID=gene7498;Dbxref=GeneID:1102873;Name=SC6D11.31c;gbkey=Gene;gene=SC6D11.31c;gene_biotype=protein_coding;gene_synonym=SC6D11.31c;locus_tag=SCO7435
NC_003888.3	RefSeq	CDS	8248054	8249322	.	-	0	ID=cds7364;Parent=gene7498;Dbxref=Genbank:NP_631484.1,GeneID:1102873;Name=NP_631484.1;Note=SC6D11.31c%2C possible transmembrane transport protein%2C len: 422 aa. Similar to many transport proteins e.g. Acinetobacter sp. TR:O30513(EMBL:AF009224) benzoate transport protein%2C BenK (466 aa)%2C fasta scores opt: 423 z-score: 455.2 E(): 6.2e-18 31.1%25 identity in 421 aa overlap. Contains a Prosite hit to PS00216 Sugar transport proteins signature 1 and a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC6D11.31c;product=transmembrane transport protein;protein_id=NP_631484.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8248090	8249262	.	-	.	ID=id9613;Dbxref=GeneID:1102873;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 51.00%2C E-value 2.7e-11;gbkey=misc_feature;gene=SC6D11.31c
NC_003888.3	RefSeq	sequence_feature	8249041	8249091	.	-	.	ID=id9614;Dbxref=GeneID:1102873;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SC6D11.31c
NC_003888.3	RefSeq	gene	8249413	8250867	.	-	.	ID=gene7499;Dbxref=GeneID:1102874;Name=SC6D11.32c;gbkey=Gene;gene=SC6D11.32c;gene_biotype=protein_coding;gene_synonym=SC6D11.32c;locus_tag=SCO7436
NC_003888.3	RefSeq	CDS	8249413	8250867	.	-	0	ID=cds7365;Parent=gene7499;Dbxref=Genbank:NP_631485.1,GeneID:1102874;Name=NP_631485.1;Note=SC6D11.32c%2C probable aldehyde dehydrogenase%2C len: 484 aa. Highly similar to many dehydrogenases including: Pseudomonas putida SW:XYLC_PSEPU(EMBL:U15151) benzaldehyde dehydrogenase [NAD+] (EC 1.2.1.28) (487 aa)%2C fasta scores opt: 1519 z-score: 1634.7 E():0 47.6%25 identity in 483 aa overlap and Streptomyces coelicolor TR:Q9X8J9(EMBL:AL049841)  aldehyde dehydrogenase%2C SCE9.27C (486 aa)%2C fasta scores opt: 1215 z-score: 1308.5 E():0 43.1%25 identity in 476 aa overlap. Contains a Prosite hit to PS00687 Aldehyde dehydrogenases glutamic acid active site and a Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family.;gbkey=CDS;gene=SC6D11.32c;product=aldehyde dehydrogenase;protein_id=NP_631485.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8249437	8250819	.	-	.	ID=id9615;Dbxref=GeneID:1102874;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 475.80%2C E-value 3.5e-139;gbkey=misc_feature;gene=SC6D11.32c
NC_003888.3	RefSeq	sequence_feature	8250097	8250120	.	-	.	ID=id9616;Dbxref=GeneID:1102874;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature;gene=SC6D11.32c
NC_003888.3	RefSeq	gene	8250914	8252494	.	-	.	ID=gene7500;Dbxref=GeneID:1102875;Name=SC6D11.33c;gbkey=Gene;gene=SC6D11.33c;gene_biotype=protein_coding;gene_synonym=SC6D11.33c;locus_tag=SCO7437
NC_003888.3	RefSeq	CDS	8250914	8252494	.	-	0	ID=cds7366;Parent=gene7500;Dbxref=Genbank:NP_631486.1,GeneID:1102875;Name=NP_631486.1;Note=catalyzes the formation of benzaldehyde from benzoylformate;gbkey=CDS;gene=SC6D11.33c;product=benzoylformate decarboxylase;protein_id=NP_631486.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8250941	8252461	.	-	.	ID=id9617;Dbxref=GeneID:1102875;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzymes%2C score 270.60%2C E-value 1.7e-83;gbkey=misc_feature;gene=SC6D11.33c
NC_003888.3	RefSeq	sequence_feature	8251208	8251267	.	-	.	ID=id9618;Dbxref=GeneID:1102875;Note=PS00187 Thiamine pyrophosphate enzymes signature;gbkey=misc_feature;gene=SC6D11.33c
NC_003888.3	RefSeq	gene	8252589	8253524	.	+	.	ID=gene7501;Dbxref=GeneID:1102876;Name=SC6D11.34;gbkey=Gene;gene=SC6D11.34;gene_biotype=protein_coding;gene_synonym=SC6D11.34;locus_tag=SCO7438
NC_003888.3	RefSeq	CDS	8252589	8253524	.	+	0	ID=cds7367;Parent=gene7501;Dbxref=Genbank:NP_631487.1,GeneID:1102876;Name=NP_631487.1;Note=SC6D11.34%2C possible LysR-family transcriptional regulatory protein%2C len: 311 aa. Similar to many LysR-family regulators involved in the control of nodulation e.g. Rhizobium sp. (strain NGR234) SW:NOD1_RHISN(EMBL:AE000065) nodulation protein D I (322 aa)%2C fasta scores opt: 449 z-score: 537.5 E(): 1.6e-22 32.3%25 identity in 294 aa overlap. Contains a Prosite hit to PS00044 Bacterial regulatory proteins%2C lysR family signature and Pfam matches to PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and Pfam match to entry PF01046 NodD_C_term%2C NodD transcription activator carboxyl terminal region. The helix-turn-helix motif situated between residues 19..40 (+4.28 SD).;gbkey=CDS;gene=SC6D11.34;product=LysR family transcriptional regulator;protein_id=NP_631487.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8252604	8253035	.	+	.	ID=id9619;Dbxref=GeneID:1102876;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 128.70%2C E-value 1.1e-34;gbkey=misc_feature;gene=SC6D11.34
NC_003888.3	RefSeq	sequence_feature	8252646	8252738	.	+	.	ID=id9620;Dbxref=GeneID:1102876;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC6D11.34
NC_003888.3	RefSeq	sequence_feature	8253039	8253482	.	+	.	ID=id9621;Dbxref=GeneID:1102876;Note=Pfam match to entry PF01046 NodD_C_term%2C NodD transcription activator carboxyl terminal region%2C score 25.40%2C E-value 2e-06;gbkey=misc_feature;gene=SC6D11.34
NC_003888.3	RefSeq	gene	8253535	8254275	.	+	.	ID=gene7502;Dbxref=GeneID:1102877;Name=SC6D11.35;gbkey=Gene;gene=SC6D11.35;gene_biotype=protein_coding;gene_synonym=SC6D11.35;locus_tag=SCO7439
NC_003888.3	RefSeq	CDS	8253535	8254275	.	+	0	ID=cds7368;Parent=gene7502;Dbxref=Genbank:NP_631488.1,GeneID:1102877;Name=NP_631488.1;Note=SC6D11.35%2C unknown%2C len: 246 aa. Weakly similar to a protein of undefined function from Bacillus subtilis TR:P71089(EMBL:Z82044) (251 aa)%2C fasta scores opt: 424 z-score: 507.0 E(): 8e-21 35.4%25 identity in 209 aa overlap;gbkey=CDS;gene=SC6D11.35;product=hypothetical protein;protein_id=NP_631488.1;transl_table=11
NC_003888.3	RefSeq	gene	8254317	8255261	.	-	.	ID=gene7503;Dbxref=GeneID:1102878;Name=SC6D11.36c;gbkey=Gene;gene=SC6D11.36c;gene_biotype=protein_coding;gene_synonym=SC6D11.36c;locus_tag=SCO7440
NC_003888.3	RefSeq	CDS	8254317	8255261	.	-	0	ID=cds7369;Parent=gene7503;Dbxref=Genbank:NP_631489.1,GeneID:1102878;Name=NP_631489.1;Note=SC6D11.36c%2C possible hydrolase%2C len: 314 aa. Similar to several including Moraxella sp. SW:DEH1_MORSP (EMBL:D90422) haloacetate dehalogenase H-1 (EC 3.8.1.3) (294 aa). fasta scores opt: 356 z-score: 414.9 E(): 1.1e-15 27.9%25 identity in 297 aa overlap and Streptomyces coelicolor TR:O86546 (EMBL:AL031350) hydrolase%2C SC1F2.09C (309 aa)%2C fasta scores opt: 498 z-score: 577.2 E(): 9.9e-25 35.2%25 identity in 307 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold.;gbkey=CDS;gene=SC6D11.36c;product=hydrolase;protein_id=NP_631489.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8254338	8255033	.	-	.	ID=id9622;Dbxref=GeneID:1102878;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 61.80%2C E-value 1.5e-14;gbkey=misc_feature;gene=SC6D11.36c
NC_003888.3	RefSeq	gene	8255348	8255941	.	+	.	ID=gene7504;Dbxref=GeneID:1102879;Name=SC6D11.37;gbkey=Gene;gene=SC6D11.37;gene_biotype=protein_coding;gene_synonym=SC6D11.37;locus_tag=SCO7441
NC_003888.3	RefSeq	CDS	8255348	8255941	.	+	0	ID=cds7370;Parent=gene7504;Dbxref=Genbank:NP_631490.1,GeneID:1102879;Name=NP_631490.1;Note=SC6D11.37%2C possible transcriptional regulatory protein%2C len: 197 aa. Similar to several regulators e.g. Streptomyces lividans TR:O85695(EMBL:AF072709) transcriptional regulator (192 aa)%2C fasta scores opt: 170 z-score: 212.6 E(): 0.0002 29.7%25 identity in 192 aa overlap. Contains a possible helix-turn-helix motif situated between residues 29..50 (+3.58 SD).;gbkey=CDS;gene=SC6D11.37;product=transcriptional regulator;protein_id=NP_631490.1;transl_table=11
NC_003888.3	RefSeq	gene	8256100	8256564	.	+	.	ID=gene7505;Dbxref=GeneID:1102880;Name=SC6D11.38;gbkey=Gene;gene=SC6D11.38;gene_biotype=protein_coding;gene_synonym=SC6D11.38;locus_tag=SCO7442
NC_003888.3	RefSeq	CDS	8256100	8256564	.	+	0	ID=cds7371;Parent=gene7505;Dbxref=Genbank:NP_631491.1,GeneID:1102880;Name=NP_631491.1;Note=SC6D11.38%2C unknown%2C len: 154 aa. Rich in the amino acid Ala.;gbkey=CDS;gene=SC6D11.38;product=hypothetical protein;protein_id=NP_631491.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8256639	8256643	.	+	.	ID=id9623;gbkey=RBS
NC_003888.3	RefSeq	gene	8256653	8258293	.	+	.	ID=gene7506;Dbxref=GeneID:1102881;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;gene_synonym=pgm;locus_tag=SCO7443
NC_003888.3	RefSeq	CDS	8256653	8258293	.	+	0	ID=cds7372;Parent=gene7506;Dbxref=Genbank:NP_631492.1,GeneID:1102881;Name=NP_631492.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;gene=pgm;product=phosphoglucomutase;protein_id=NP_631492.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8256761	8258203	.	+	.	ID=id9624;Dbxref=GeneID:1102881;Note=Pfam match to entry PF00408 PGM_PMM%2C Phosphoglucomutase/phosphomannomutase%2C score 391.10%2C E-value 1.1e-113;gbkey=misc_feature;gene=pgm
NC_003888.3	RefSeq	sequence_feature	8257070	8257114	.	+	.	ID=id9625;Dbxref=GeneID:1102881;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature;gbkey=misc_feature;gene=pgm
NC_003888.3	RefSeq	gene	8258333	8259604	.	-	.	ID=gene7507;Dbxref=GeneID:1102882;Name=SC5C11.01c;gbkey=Gene;gene=SC5C11.01c;gene_biotype=protein_coding;gene_synonym=SC5C11.01c,SC6D11.40c;locus_tag=SCO7444
NC_003888.3	RefSeq	CDS	8258333	8259604	.	-	0	ID=cds7373;Parent=gene7507;Dbxref=Genbank:NP_733733.1,GeneID:1102882;Name=NP_733733.1;Note=SC5C11.01c%2C possible cytochrome P450%2C partial CDS%2C len:> 40 aa. This CDS forms the N-terminus of SC6D11.40c%2C carried on the adjoining cosmid%2C which is weakly similar to many cytochrome P450's. This similarity is lost in this portion of the predicted protein.~SC6D11.40c%2C possible cytochrome P450%2C partial CDS%2C len:> 421 aa. Weakly similar to many cytochrome P450's including: Saccharopolyspora erythraea (Streptomyces erythraeus) SW:CPXQ_SACER(EMBL:U82823) cytochrome P450 113A1 (erythromycin B/D C-12 hydroxylase) (397 aa)%2C opt: 259 z-score: 300.0 E(): 2.7e-09 30.5%25 identity in 361 aa overlap. Overlaps and extends into CDS SC5C11.01c on the adjoining cosmid. Contains a Prosite hit to PS00086 Cytochrome P450 cysteine heme-iron ligand signature and a Pfam match to entry PF00067 p450%2C Cytochrome P450.;gbkey=CDS;gene=SC5C11.01c;product=cytochrome P450 (fragment);protein_id=NP_733733.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8258450	8258749	.	-	.	ID=id9626;Dbxref=GeneID:1102882;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 29.60%2C E-value 1.4e-07;gbkey=misc_feature;gene=SC5C11.01c
NC_003888.3	RefSeq	sequence_feature	8258495	8258524	.	-	.	ID=id9627;Dbxref=GeneID:1102882;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SC5C11.01c
NC_003888.3	RefSeq	repeat_region	8259618	8259710	.	+	.	ID=id9628;Note=repeat region containing 3xATTCCGCCGAGTC(G/C)GGCGGTGCC repeat units;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	8259780	8259783	.	+	.	ID=id9629;gbkey=RBS
NC_003888.3	RefSeq	gene	8259792	8260529	.	+	.	ID=gene7508;Dbxref=GeneID:1102883;Name=SC5C11.02;gbkey=Gene;gene=SC5C11.02;gene_biotype=protein_coding;gene_synonym=SC5C11.02;locus_tag=SCO7445
NC_003888.3	RefSeq	CDS	8259792	8260529	.	+	0	ID=cds7374;Parent=gene7508;Dbxref=Genbank:NP_631493.1,GeneID:1102883;Name=NP_631493.1;Note=SC5C11.02%2C unknown%2C len: 245 aa. Weakly similar to Escherichia coli SW:YJHP_ECOLI(EMBL:U14003) hypothetical 27.4 KD protein (248 aa)%2C fasta scores opt: 301 z-score: 358.4 E(): 1.5e-12 28.2%25 identity in 248 aa overlap.;gbkey=CDS;gene=SC5C11.02;product=hypothetical protein;protein_id=NP_631493.1;transl_table=11
NC_003888.3	RefSeq	gene	8260631	8261071	.	+	.	ID=gene7509;Dbxref=GeneID:1102884;Name=SC5C11.03;gbkey=Gene;gene=SC5C11.03;gene_biotype=protein_coding;gene_synonym=SC5C11.03;locus_tag=SCO7446
NC_003888.3	RefSeq	CDS	8260631	8261071	.	+	0	ID=cds7375;Parent=gene7509;Dbxref=Genbank:NP_631494.1,GeneID:1102884;Name=NP_631494.1;Note=SC5C11.03%2C possible regulator%2C len: 146 aa. Similar to Streptomyces fradiae TR:Q9Z9I5 (EMBL:AB024056) beta-lactamase regulator protein (139 aa)%2C fasta scores opt: 215 z-score: 266.6 E(): 2e-07 36.6%25 identity in 131 aa overlap and Streptomyces coelicolor TR:Q9X7S3 (EMBL:AL049863) regulator protein%2C SC5H1.15C (151 aa)%2C fasta scores opt: 347 z-score: 419.9 E(): 5.7e-16 44.4%25 identity in 144 aa overlap.;gbkey=CDS;gene=SC5C11.03;product=regulator;protein_id=NP_631494.1;transl_table=11
NC_003888.3	RefSeq	gene	8261520	8262071	.	-	.	ID=gene7510;Dbxref=GeneID:1102885;Name=SC5C11.04c;gbkey=Gene;gene=SC5C11.04c;gene_biotype=protein_coding;gene_synonym=SC5C11.04c;locus_tag=SCO7447
NC_003888.3	RefSeq	CDS	8261520	8262071	.	-	0	ID=cds7376;Parent=gene7510;Dbxref=Genbank:NP_631495.1,GeneID:1102885;Name=NP_631495.1;Note=SC5C11.04c possible acetyltranferase%2C len: 183 aa. Similar to many including: Proteus mirabilis TR:O86434(EMBL:AJ000084) acetyl transferase (185 aa)%2C fasta scores opt: 428 z-score: 512.9 E(): 3.8e-21 43.6%25 identity in 179 aa overlap. Contains a Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SC5C11.04c;product=acetyltranferase;protein_id=NP_631495.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8261628	8262041	.	-	.	ID=id9630;Dbxref=GeneID:1102885;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 41.20%2C E-value 2.4e-08;gbkey=misc_feature;gene=SC5C11.04c
NC_003888.3	RefSeq	gene	8262207	8264150	.	+	.	ID=gene7511;Dbxref=GeneID:1102886;Name=SC5C11.05;gbkey=Gene;gene=SC5C11.05;gene_biotype=protein_coding;gene_synonym=SC5C11.05;locus_tag=SCO7448
NC_003888.3	RefSeq	CDS	8262207	8264150	.	+	0	ID=cds7377;Parent=gene7511;Dbxref=Genbank:NP_631496.1,GeneID:1102886;Name=NP_631496.1;Note=SC5C11.05%2C unknown%2C len: 647 aa. Similar to another protein of undefined function from Streptomyces coelicolor TR:Q9X8W1(EMBL:AL078610) hypothetical 66.2 KD protein%2C SCH35.45c (634 aa)%2C fasta scores opt: 1537 z-score: 1606.6 E(): 0 46.3%25 identity in 570 aa overlap. Contains a Pfam match to entry PF00989 PAS%2C PAS domain.;gbkey=CDS;gene=SC5C11.05;product=hypothetical protein;protein_id=NP_631496.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8264401	8264405	.	+	.	ID=id9631;gbkey=RBS
NC_003888.3	RefSeq	gene	8264413	8265090	.	+	.	ID=gene7512;Dbxref=GeneID:1102887;Name=SC5C11.06;gbkey=Gene;gene=SC5C11.06;gene_biotype=protein_coding;gene_synonym=SC5C11.06;locus_tag=SCO7449
NC_003888.3	RefSeq	CDS	8264413	8265090	.	+	0	ID=cds7378;Parent=gene7512;Dbxref=Genbank:NP_631497.1,GeneID:1102887;Name=NP_631497.1;Note=SC5C11.06%2C possible /membrane protein%2C len: 225 aa. Contains repeat sequences 3xGDW(N/D)HDD(S/T/A)S(Y/S)(S/G)KEHDNGSKHDEPRGG%2C 3xMHTGGG(A/G)LAV(T/N)E and 1xMHTGGGGLA. Also contains possible N-terminal region signal sequence peptide and possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC5C11.06;product=hypothetical protein;protein_id=NP_631497.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8264500	8264577	.	+	.	ID=id9632;Dbxref=GeneID:1102887;Note=imperfect direct repeat of bases 5133..5210 and 5250..5327;gbkey=repeat_region;gene=SC5C11.06
NC_003888.3	RefSeq	repeat_region	8264578	8264616	.	+	.	ID=id9633;Dbxref=GeneID:1102887;Note=imperfect direct repeat of bases 5211..5249 and 5328..5366.;gbkey=repeat_region;gene=SC5C11.06
NC_003888.3	RefSeq	repeat_region	8264617	8264694	.	+	.	ID=id9634;Dbxref=GeneID:1102887;Note=imperfect direct repeat of bases 5016..5093 and 5250..5327;gbkey=repeat_region;gene=SC5C11.06
NC_003888.3	RefSeq	repeat_region	8264695	8264733	.	+	.	ID=id9635;Dbxref=GeneID:1102887;Note=imperfect direct repeat 0f bases 5094..5132 and 5328..5366.;gbkey=repeat_region;gene=SC5C11.06
NC_003888.3	RefSeq	repeat_region	8264734	8264811	.	+	.	ID=id9636;Dbxref=GeneID:1102887;Note=imperfect direct repeat of bases 5016..5093 and 5133..5210.;gbkey=repeat_region;gene=SC5C11.06
NC_003888.3	RefSeq	repeat_region	8264812	8264850	.	+	.	ID=id9637;Dbxref=GeneID:1102887;Note=imperfect direct repeat of bases 5094..5132 and 5211..5249.;gbkey=repeat_region;gene=SC5C11.06
NC_003888.3	RefSeq	repeat_region	8264965	8264991	.	+	.	ID=id9638;Dbxref=GeneID:1102887;Note=incomplete direct repeat of bases 5094..5132%2C 5211..5249 and 5328..5366.;gbkey=repeat_region;gene=SC5C11.06
NC_003888.3	RefSeq	gene	8265291	8265896	.	+	.	ID=gene7513;Dbxref=GeneID:1102888;Name=SC5C11.07;gbkey=Gene;gene=SC5C11.07;gene_biotype=protein_coding;gene_synonym=SC5C11.07;locus_tag=SCO7450
NC_003888.3	RefSeq	CDS	8265291	8265896	.	+	0	ID=cds7379;Parent=gene7513;Dbxref=Genbank:NP_631498.1,GeneID:1102888;Name=NP_631498.1;Note=SC5C11.07%2C possible hypothetical protein%2C len: 201 aa. Similar to Streptomyces coelicolor TR:CAB63184 (EMBL:AL133469)  hypothetical protein%2C SCM10.23 (221 aa)%2C fasta scores opt: 512 z-score: 527.4 E(): 5.9e-22 41.4%25 identity in 198 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC5C11.07;product=hypothetical protein;protein_id=NP_631498.1;transl_table=11
NC_003888.3	RefSeq	gene	8266048	8267244	.	+	.	ID=gene7514;Dbxref=GeneID:1102889;Name=SC5C11.08;gbkey=Gene;gene=SC5C11.08;gene_biotype=protein_coding;gene_synonym=SC5C11.08;locus_tag=SCO7451
NC_003888.3	RefSeq	CDS	8266048	8267244	.	+	0	ID=cds7380;Parent=gene7514;Dbxref=Genbank:NP_631499.1,GeneID:1102889;Name=NP_631499.1;Note=SC5C11.08%2C unknown%2C len: 398 aa. Highly similar to several proteins of undefined function associated with polyketide biosynthesis including: Streptomyces coelicolor SW:WH42_STRCO(EMBL:X55942) 42.8 KD protein in whiE locus (WhiE ORF I) SC6G9.13 (397 aa)%2C fasta scores opt: 1392 z-score: 1637.1 E():0 56.1%25 identity in 401 aa overlap and Streptomyces cyaneus (Streptomyces curacoi) SW:CURD_STRCN(EMBL:X62518) polyketide synthase%2C CurD (367 aa)%2C fasta score opt: 1451 z-score: 1706.9 E():0 62.0%25 identity in 368 aa overlap.;gbkey=CDS;gene=SC5C11.08;product=hypothetical protein;protein_id=NP_631499.1;transl_table=11
NC_003888.3	RefSeq	gene	8267283	8268311	.	-	.	ID=gene7515;Dbxref=GeneID:1102890;Name=SC5C11.09c;gbkey=Gene;gene=SC5C11.09c;gene_biotype=protein_coding;gene_synonym=SC5C11.09c;locus_tag=SCO7452
NC_003888.3	RefSeq	CDS	8267283	8268311	.	-	0	ID=cds7381;Parent=gene7515;Dbxref=Genbank:NP_631500.1,GeneID:1102890;Name=NP_631500.1;Note=SC5C11.09c%2C possible O-methyltransferase%2C len: 342 aa. Similar to many e.g. Streptomyces glaucescens SW:TCMN_STRGA (EMBL:M80674) multi-functional cyclase-dehydratase-3-O-methyl transferase%2C TcmN%2C forming the first step in the biosynthesis of the polyketide antibiotic tetracenomycin C (494 aa)%2C fasta scores opt: 472 z-score: 554.8 E(): 1.8e-23 30.8%25 identity in 308 aa overlap and Streptomyces lavendulae TR:Q9X5T6(EMBL:AF127374) O-methyltransferase%2C MmcR%2C found within the mitomycin C biosynthetic cluster (351 aa)%2C fasta scores opt: 654 z-score: 769.9 E(): 0 37.1%25 identity in 340 aa overlap. Contains a Pfam match to entry PF00891 Methyltransf_2%2C O-methyltransferase.;gbkey=CDS;gene=SC5C11.09c;product=O-methyltransferase;protein_id=NP_631500.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8267361	8268080	.	-	.	ID=id9639;Dbxref=GeneID:1102890;Note=Pfam match to entry PF00891 Methyltransf_2%2C O-methyltransferase%2C score 136.80%2C E-value 3.8e-37;gbkey=misc_feature;gene=SC5C11.09c
NC_003888.3	RefSeq	gene	8268376	8269446	.	-	.	ID=gene7516;Dbxref=GeneID:1102891;Name=SC5C11.10c;gbkey=Gene;gene=SC5C11.10c;gene_biotype=protein_coding;gene_synonym=SC5C11.10c;locus_tag=SCO7453
NC_003888.3	RefSeq	CDS	8268376	8269446	.	-	0	ID=cds7382;Parent=gene7516;Dbxref=Genbank:NP_631501.1,GeneID:1102891;Name=NP_631501.1;Note=SC5C11.10c%2C hypothetical protein%2C len: 356 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5C11.10c;product=hypothetical protein;protein_id=NP_631501.1;transl_table=11
NC_003888.3	RefSeq	gene	8269590	8270384	.	+	.	ID=gene7517;Dbxref=GeneID:1102892;Name=SC5C11.11;gbkey=Gene;gene=SC5C11.11;gene_biotype=protein_coding;gene_synonym=SC5C11.11;locus_tag=SCO7454
NC_003888.3	RefSeq	CDS	8269590	8270384	.	+	0	ID=cds7383;Parent=gene7517;Dbxref=Genbank:NP_631502.1,GeneID:1102892;Name=NP_631502.1;Note=SC5C11.11%2C possible membrane protein%2C len: 264 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC5C11.11;product=hypothetical protein;protein_id=NP_631502.1;transl_table=11
NC_003888.3	RefSeq	gene	8270459	8270995	.	+	.	ID=gene7518;Dbxref=GeneID:1102893;Name=SC5C11.12;gbkey=Gene;gene=SC5C11.12;gene_biotype=protein_coding;gene_synonym=SC5C11.12;locus_tag=SCO7455
NC_003888.3	RefSeq	CDS	8270459	8270995	.	+	0	ID=cds7384;Parent=gene7518;Dbxref=Genbank:NP_631503.1,GeneID:1102893;Name=NP_631503.1;Note=SC5C11.12%2C possible isochorismatase (EC 3.3.2.1)%2C len: 178 aa. Similar to several including: Escherichia coli SW:ENTB_ECOLI(EMBL:M24148) isochorismatase (EC 3.3.2.1)%2C EntB%2C involved in enterobactin biosynthesis (285 aa)%2C fasta scores opt: 210 z-score: 266.3 E(): 2.1e-07 26.3%25 identity in 179 aa overlap. Contains a Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family.;gbkey=CDS;gene=SC5C11.12;product=isochorismatase;protein_id=NP_631503.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8270471	8270932	.	+	.	ID=id9640;Dbxref=GeneID:1102893;Note=Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family%2C score 99.00%2C E-value 9.2e-26;gbkey=misc_feature;gene=SC5C11.12
NC_003888.3	RefSeq	gene	8271037	8271528	.	-	.	ID=gene7519;Dbxref=GeneID:1102894;Name=SC5C11.13c;gbkey=Gene;gene=SC5C11.13c;gene_biotype=protein_coding;gene_synonym=SC5C11.13c;locus_tag=SCO7456
NC_003888.3	RefSeq	CDS	8271037	8271528	.	-	0	ID=cds7385;Parent=gene7519;Dbxref=Genbank:NP_631504.1,GeneID:1102894;Name=NP_631504.1;Note=SC5C11.13c%2C unknown%2C len: 163 aa.;gbkey=CDS;gene=SC5C11.13c;product=hypothetical protein;protein_id=NP_631504.1;transl_table=11
NC_003888.3	RefSeq	gene	8271571	8271969	.	-	.	ID=gene7520;Dbxref=GeneID:1102895;Name=SC5C11.14c;gbkey=Gene;gene=SC5C11.14c;gene_biotype=protein_coding;gene_synonym=SC5C11.14c;locus_tag=SCO7457
NC_003888.3	RefSeq	CDS	8271571	8271969	.	-	0	ID=cds7386;Parent=gene7520;Dbxref=Genbank:NP_631505.1,GeneID:1102895;Name=NP_631505.1;Note=SC5C11.14c%2C unknown%2C len: 132 aa.;gbkey=CDS;gene=SC5C11.14c;product=hypothetical protein;protein_id=NP_631505.1;transl_table=11
NC_003888.3	RefSeq	gene	8272128	8272493	.	+	.	ID=gene7521;Dbxref=GeneID:1102896;Name=SC5C11.15;gbkey=Gene;gene=SC5C11.15;gene_biotype=protein_coding;gene_synonym=SC5C11.15;locus_tag=SCO7458
NC_003888.3	RefSeq	CDS	8272128	8272493	.	+	0	ID=cds7387;Parent=gene7521;Dbxref=Genbank:NP_631506.1,GeneID:1102896;Name=NP_631506.1;Note=SC5C11.15%2C possible membrane protein%2C len: 121 aa. Similar in parts to several proteins of undefined function e.g. Mycobacterium tuberculosis TR:O53879(EMBL:AL022004) hypothetical 40.0 KD protein (407 aa)%2C fasta scores opt: 331 z-score: 403.1 E(): 4.9e-15 50.0%25 identity in 108 aa overlap. Contains a possible membrane spanning hydrophobic domain.;gbkey=CDS;gene=SC5C11.15;product=hypothetical protein;protein_id=NP_631506.1;transl_table=11
NC_003888.3	RefSeq	gene	8272690	8273529	.	-	.	ID=gene7522;Dbxref=GeneID:1102897;Name=SC5C11.16c;gbkey=Gene;gene=SC5C11.16c;gene_biotype=protein_coding;gene_synonym=SC5C11.16c;locus_tag=SCO7459
NC_003888.3	RefSeq	CDS	8272690	8273529	.	-	0	ID=cds7388;Parent=gene7522;Dbxref=Genbank:NP_631507.1,GeneID:1102897;Name=NP_631507.1;gbkey=CDS;gene=SC5C11.16c;product=ABC transporter ATP-binding protein;protein_id=NP_631507.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8272828	8273397	.	-	.	ID=id9641;Dbxref=GeneID:1102897;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 159.90%2C E-value 4.5e-44;gbkey=misc_feature;gene=SC5C11.16c
NC_003888.3	RefSeq	sequence_feature	8273017	8273061	.	-	.	ID=id9642;Dbxref=GeneID:1102897;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC5C11.16c
NC_003888.3	RefSeq	sequence_feature	8273353	8273376	.	-	.	ID=id9643;Dbxref=GeneID:1102897;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5C11.16c
NC_003888.3	RefSeq	gene	8273736	8274806	.	+	.	ID=gene7523;Dbxref=GeneID:1102898;Name=SC5C11.17;gbkey=Gene;gene=SC5C11.17;gene_biotype=protein_coding;gene_synonym=SC5C11.17;locus_tag=SCO7460
NC_003888.3	RefSeq	CDS	8273736	8274806	.	+	0	ID=cds7389;Parent=gene7523;Dbxref=Genbank:NP_631508.1,GeneID:1102898;Name=NP_631508.1;Note=SC5C11.17%2C possible lipoprotein%2C len: 356 aa. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC5C11.17;product=lipoprotein;protein_id=NP_631508.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8273805	8273837	.	+	.	ID=id9644;Dbxref=GeneID:1102898;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC5C11.17
NC_003888.3	RefSeq	stem_loop	8274782	8274825	.	-	.	ID=id9645;Note=possible stem loop.Score 50: 18/19 (94%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8274847	8275533	.	-	.	ID=gene7524;Dbxref=GeneID:1102899;Name=SCBAC14E8.01c;gbkey=Gene;gene=SCBAC14E8.01c;gene_biotype=protein_coding;gene_synonym=SCBAC14E8.01c;locus_tag=SCO7461
NC_003888.3	RefSeq	CDS	8274847	8275533	.	-	0	ID=cds7390;Parent=gene7524;Dbxref=Genbank:NP_631509.1,GeneID:1102899;Name=NP_631509.1;Note=SCBAC14E8.01c%2C probable hydrolase%2C len: 228 aa%3B similar to SW:TRYD_DROME (EMBL:U04853) Drosophila melanogaster trypsin delta precursor (EC 3.4.21.4) Try-delta%2C 253aa%3B fasta scores: opt: 220 Z-score: 237.9 bits: 51.4 E(): 1.1e-05%3B 32.271%25 identity in 251 aa overlap. Contains Pfam match to entry PF00089 trypsin%2C Trypsin;gbkey=CDS;gene=SCBAC14E8.01c;product=hydrolase;protein_id=NP_631509.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8274868	8275449	.	-	.	ID=id9646;Dbxref=GeneID:1102899;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 93.60%2C E-value 6.9e-29;gbkey=misc_feature;gene=SCBAC14E8.01c
NC_003888.3	RefSeq	gene	8275745	8276512	.	-	.	ID=gene7525;Dbxref=GeneID:1102900;Name=SCBAC14E8.02c;gbkey=Gene;gene=SCBAC14E8.02c;gene_biotype=protein_coding;gene_synonym=SCBAC14E8.02c;locus_tag=SCO7462
NC_003888.3	RefSeq	CDS	8275745	8276512	.	-	0	ID=cds7391;Parent=gene7525;Dbxref=Genbank:NP_631510.1,GeneID:1102900;Name=NP_631510.1;Note=SCBAC14E8.02c%2C possible integral membrane protein%2C len: 255 aa%3B similar to TR:Q49657 (EMBL:U00011) Mycobacterium leprae hypothetical 27.1 kDa protein U1177B precursor MLCL581.28c%2C 260 aa%3B fasta scores: opt: 670 Z-score: 780.5 bits: 152.0 E(): 6.8e-36%3B 47.059%25 identity in 255 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC14E8.02c;product=hypothetical protein;protein_id=NP_631510.1;transl_table=11
NC_003888.3	RefSeq	gene	8276830	8278032	.	+	.	ID=gene7526;Dbxref=GeneID:1102901;Name=cvnA13;gbkey=Gene;gene=cvnA13;gene_biotype=protein_coding;gene_synonym=cvnA13,SCBAC14E8.03;locus_tag=SCO7463
NC_003888.3	RefSeq	CDS	8276830	8278032	.	+	0	ID=cds7392;Parent=gene7526;Dbxref=Genbank:NP_631511.1,GeneID:1102901;Name=NP_631511.1;Note=SCBAC14E8.03%2C cvnA13%2C possible sensor histidine kinase%2C len: 400 aa%3B similar to TR:Q9L137 (EMBL:AL158061) Streptomyces coelicolor sensor histidine-kinase SC6D11.18c%2C 543 aa%3B fasta scores: pt: 500 Z-score: 444.9 bits: 91.6 E(): 3.3e-17%3B 32.591%25 identity in 359 aa overlap and to TR:Q9AJP4 (EMBL:AB044803) Streptomyces griseus ORF1%2C 543 aa%3B fasta scores: opt: 511 Z-score: 495.4 E(): 5.8e-20%3B 34.627%25 identity in 335 aa overlap. Contains Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=cvnA13;product=sensor histidine kinase;protein_id=NP_631511.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8277334	8277501	.	+	.	ID=id9647;Dbxref=GeneID:1102901;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase%2C score 19.00%2C E-value 0.00071;gbkey=misc_feature;gene=cvnA13
NC_003888.3	RefSeq	ribosome_entry_site	8278021	8278025	.	+	.	ID=id9648;Dbxref=GeneID:1102901;gbkey=RBS;gene=cvnA13
NC_003888.3	RefSeq	gene	8278029	8278430	.	+	.	ID=gene7527;Dbxref=GeneID:1102902;Name=cvnB13;gbkey=Gene;gene=cvnB13;gene_biotype=protein_coding;gene_synonym=cvnB13,SCBAC14E8.04;locus_tag=SCO7464
NC_003888.3	RefSeq	CDS	8278029	8278430	.	+	0	ID=cds7393;Parent=gene7527;Dbxref=Genbank:NP_631512.1,GeneID:1102902;Name=NP_631512.1;Note=SCBAC14E8.04%2C cvnB13%2C hypothetical protein%2C len: 133 aa%3B similar to TR:Q9L138 (EMBL:AL158061) Streptomyces coelicolor hypothetical 14.a kDa protein SC6D11.17c%2C 135 aa%3B fasta scores: opt: 321 Z-score: 425.0 bits: 84.4 E(): 4.3e-16%3B 40.476%25 identity in 126 aa overlap;gbkey=CDS;gene=cvnB13;product=hypothetical protein;protein_id=NP_631512.1;transl_table=11
NC_003888.3	RefSeq	gene	8278427	8278804	.	+	.	ID=gene7528;Dbxref=GeneID:1102903;Name=cvnC13;gbkey=Gene;gene=cvnC13;gene_biotype=protein_coding;gene_synonym=cvnC13,SCBAC14E8.05;locus_tag=SCO7465
NC_003888.3	RefSeq	CDS	8278427	8278804	.	+	0	ID=cds7394;Parent=gene7528;Dbxref=Genbank:NP_631513.1,GeneID:1102903;Name=NP_631513.1;Note=SCBAC14E8.05%2C cvnC13%2C hypothetical protein%2C len: 125 aa%3B similar to TR:Q9X834 (EMBL:AL049727) Streptomyces coelicolor hypothetical 12.8 kDa protein SC9B1.14c%2C 119 aa%3B fasta scores: opt: 288 Z-score: 370.8 bits: 74.1 E(): 4.5e-13%3B 45.082%25 identity in 122 aa overlap. Contains a TTA leucine codon%2C possible target for bldA regulation;gbkey=CDS;gene=cvnC13;product=hypothetical protein;protein_id=NP_631513.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8278466	8278468	.	+	.	ID=id9649;Dbxref=GeneID:1102903;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=cvnC13
NC_003888.3	RefSeq	gene	8278842	8279372	.	+	.	ID=gene7529;Dbxref=GeneID:1102904;Name=cvnD13;gbkey=Gene;gene=cvnD13;gene_biotype=protein_coding;gene_synonym=cvnD13,SCBAC14E8.06;locus_tag=SCO7466
NC_003888.3	RefSeq	CDS	8278842	8279372	.	+	0	ID=cds7395;Parent=gene7529;Dbxref=Genbank:NP_631514.1,GeneID:1102904;Name=NP_631514.1;Note=SCBAC14E8.06%2C cvnD13%2C possible ATP/GTP-binding protein%2C len: 176 aa%3B similar to TR:Q9XAE1 (EMBL:AL079356) Streptomyces coelicolor ATP/GTP-binding protein SC6G9.41c%2C 191 aa%3B fasta scores: opt: 615 Z-score: 755.2 bits: 146.4 E(): 1.7e-34%3B 55.172%25 identity in 174 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=cvnD13;product=ATP/GTP-binding protein;protein_id=NP_631514.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8278860	8278883	.	+	.	ID=id9650;Dbxref=GeneID:1102904;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cvnD13
NC_003888.3	RefSeq	ribosome_entry_site	8279625	8279629	.	+	.	ID=id9651;gbkey=RBS
NC_003888.3	RefSeq	gene	8279637	8280764	.	+	.	ID=gene7530;Dbxref=GeneID:1102905;Name=SCBAC14E8.07;gbkey=Gene;gene=SCBAC14E8.07;gene_biotype=protein_coding;gene_synonym=SCBAC14E8.07;locus_tag=SCO7467
NC_003888.3	RefSeq	CDS	8279637	8280764	.	+	0	ID=cds7396;Parent=gene7530;Dbxref=Genbank:NP_631515.1,GeneID:1102905;Name=NP_631515.1;Note=SCBAC14E8.07%2C unknown%2C len: 375 aa;gbkey=CDS;gene=SCBAC14E8.07;product=hypothetical protein;protein_id=NP_631515.1;transl_table=11
NC_003888.3	RefSeq	gene	8280867	8282165	.	-	.	ID=gene7531;Dbxref=GeneID:1102906;Name=SCBAC14E8.08c;gbkey=Gene;gene=SCBAC14E8.08c;gene_biotype=protein_coding;gene_synonym=SCBAC14E8.08c,SCBAC17A6.01c;locus_tag=SCO7468
NC_003888.3	RefSeq	CDS	8280867	8282165	.	-	0	ID=cds7397;Parent=gene7531;Dbxref=Genbank:NP_733734.1,GeneID:1102906;Name=NP_733734.1;Note=SCBAC17A6.01c%2C possible flavin-containing monooxygenase%2C len: >327aa: similar to many eg. TR:Q9S204 (EMBL:AL109747)  flavin-containing monooxygenase SCJ21.03 from Streptomyces coelicolor (458 aa) fasta scores%3B opt: 909%2C Z-score: 1021.7%2C 45.399%25 identity (45.679%25 ungapped) in 326 aa overlap and SW:P31513 (FMO3_HUMAN) hepatic flavin-containing monooxygenase FMO3 (defects in which cause fish-odour syndrome) (531 aa) fasta scores%3B opt: 661%2C Z-score: 743.2%2C 34.024%25 identity (35.826%25 ungapped) in 338 aa overlap. Contains Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like.~SCBAC14E8.08c%2C possible monooxigenase (fragment)%2C len: >140 aa%3B similar to C-terminal region of SW:FMO5_RABIT (EMBL:L08449) Oryctolagus cuniculus dimethylaniline monooxygenase [N-oxide forming] 5 (EC 1.14.13.8) Fmo5%2C 532 aa%3B fasta scores: opt: 259 Z-score: 319.3 bits: 66.9 E(): 3.3e-10%3B 32.353%25 identity in 136 aa overlap;gbkey=CDS;gene=SCBAC14E8.08c;product=flavin-binding monooxygenase;protein_id=NP_733734.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8281191	8282162	.	-	.	ID=id9652;Dbxref=GeneID:1102906;Note=Pfam match to entry PF00743 FMO-like%2C Flavin-binding monooxygenase-like%2C score -144.60%2C E-value 1.2e-14;gbkey=misc_feature;gene=SCBAC14E8.08c
NC_003888.3	RefSeq	gene	8282277	8283623	.	-	.	ID=gene7532;Dbxref=GeneID:1102907;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;gene_synonym=paaK,SCBAC17A6.02c;locus_tag=SCO7469
NC_003888.3	RefSeq	CDS	8282277	8283623	.	-	0	ID=cds7398;Parent=gene7532;Dbxref=Genbank:NP_631516.1,GeneID:1102907;Name=NP_631516.1;Note=SCBAC17A6.02c%2C phenylacetate-CoA ligase%2C len: 448 aa: strongly similar to many e.g. TR:Q9L9C1 (EMBL:AF176259) aerobic phenylacetate-CoA ligase from Azoarcus evansii (440 aa) fasta scores%3B opt: 1896%2C Z-score: 2065.6%2C 63.825%25 identity (64.871%25 ungapped) in 434 aa overlap. Contains 2 Pfam matches to entry PF00501 AMP-binding%2C AMP-binding enzyme.;gbkey=CDS;gene=paaK;product=phenylacetate-CoA ligase;protein_id=NP_631516.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8282508	8282603	.	-	.	ID=id9653;Dbxref=GeneID:1102907;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 21.30%2C E-value 5e-05;gbkey=misc_feature;gene=paaK
NC_003888.3	RefSeq	sequence_feature	8282712	8283152	.	-	.	ID=id9654;Dbxref=GeneID:1102907;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 42.90%2C E-value 4.2e-11;gbkey=misc_feature;gene=paaK
NC_003888.3	RefSeq	gene	8283620	8284132	.	-	.	ID=gene7533;Dbxref=GeneID:1102908;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;gene_synonym=paaI,SCBAC17A6.03c;locus_tag=SCO7470
NC_003888.3	RefSeq	CDS	8283620	8284132	.	-	0	ID=cds7399;Parent=gene7533;Dbxref=Genbank:NP_631517.1,GeneID:1102908;Name=NP_631517.1;Note=SCBAC17A6.03c%2C possible phenylacetic acid degradation protein PaaI%2C len: 170 aa: similar to many e.g. SW:P76084 (PAAI_ECOLI) phenylacetic acid degradation protein PaaI from Escherichia coli (140 aa) fasta scores%3B opt: 342%2C Z-score: 414.6%2C 45.902%25 identity (46.281%25 ungapped) in 122 aa overlap. Contains Pfam match to entry PF02584 DUF157%2C Uncharacterized protein PaaI.;gbkey=CDS;gene=paaI;product=phenylacetic acid degradation protein PaaI;protein_id=NP_631517.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8283719	8284084	.	-	.	ID=id9655;Dbxref=GeneID:1102908;Note=Pfam match to entry PF02584 DUF157%2C Uncharacterized protein PaaI%2C COG2050%2C score 102.20%2C E-value 1e-26;gbkey=misc_feature;gene=paaI
NC_003888.3	RefSeq	gene	8284297	8285283	.	+	.	ID=gene7534;Dbxref=GeneID:1102909;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.04;locus_tag=SCO7471
NC_003888.3	RefSeq	CDS	8284297	8285283	.	+	0	ID=cds7400;Parent=gene7534;Dbxref=Genbank:NP_631518.1,GeneID:1102909;Name=NP_631518.1;Note=with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA;gbkey=CDS;gene=paaA;product=phenylacetate-CoA oxygenase subunit PaaA;protein_id=NP_631518.1;transl_table=11
NC_003888.3	RefSeq	gene	8285280	8285591	.	+	.	ID=gene7535;Dbxref=GeneID:1102910;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.05;locus_tag=SCO7472
NC_003888.3	RefSeq	CDS	8285280	8285591	.	+	0	ID=cds7401;Parent=gene7535;Dbxref=Genbank:NP_631519.1,GeneID:1102910;Name=NP_631519.1;Note=with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA%3B involved in phenylacetate degradation;gbkey=CDS;gene=paaB;product=phenylacetate-CoA oxygenase subunit PaaB;protein_id=NP_631519.1;transl_table=11
NC_003888.3	RefSeq	gene	8285601	8286428	.	+	.	ID=gene7536;Dbxref=GeneID:1102911;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;gene_synonym=paaC,SCBAC17A6.06;locus_tag=SCO7473
NC_003888.3	RefSeq	CDS	8285601	8286428	.	+	0	ID=cds7402;Parent=gene7536;Dbxref=Genbank:NP_631520.1,GeneID:1102911;Name=NP_631520.1;Note=SCBAC17A6.06%2C possible phenylacetic acid degradation protein PaaC%2C len: 275 aa: similar to many e.g. SW:P76079 (PAAC_ECOLI) phenylacetic acid degradation protein PaaC from Escherichia coli (248 aa) fasta scores%3B opt: 470%2C Z-score: 547.8%2C 41.057%25 identity (44.105%25 ungapped) in 246 aa overlap.;gbkey=CDS;gene=paaC;product=phenylacetic acid degradation protein PaaC;protein_id=NP_631520.1;transl_table=11
NC_003888.3	RefSeq	gene	8286425	8286937	.	+	.	ID=gene7537;Dbxref=GeneID:1102912;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;gene_synonym=paaD,SCBAC17A6.07;locus_tag=SCO7474
NC_003888.3	RefSeq	CDS	8286425	8286937	.	+	0	ID=cds7403;Parent=gene7537;Dbxref=Genbank:NP_631521.1,GeneID:1102912;Name=NP_631521.1;Note=SCBAC17A6.07%2C possible phenylacetic acid degradation protein PaaD%2C len: 170 aa: similar to many e.g. SW:P76080 (PAAD_ECOLI) phenylacetic acid degradation protein PaaD from Escherichia coli (167 aa) fasta scores%3B opt: 474%2C Z-score: 518.6%2C 45.395%25 identity (47.586%25 ungapped) in 152 aa overlap. Contains Pfam match to entry PF01883 DUF59%2C Domain of unknown function DUF59.;gbkey=CDS;gene=paaD;product=phenylacetic acid degradation protein PaaD;protein_id=NP_631521.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8286449	8286676	.	+	.	ID=id9656;Dbxref=GeneID:1102912;Note=Pfam match to entry PF01883 DUF59%2C Domain of unknown function DUF59%2C score 58.60%2C E-value 1.3e-13;gbkey=misc_feature;gene=paaD
NC_003888.3	RefSeq	gene	8286937	8288043	.	+	.	ID=gene7538;Dbxref=GeneID:1102913;Name=SCBAC17A6.08;gbkey=Gene;gene=SCBAC17A6.08;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.08;locus_tag=SCO7475
NC_003888.3	RefSeq	CDS	8286937	8288043	.	+	0	ID=cds7404;Parent=gene7538;Dbxref=Genbank:NP_631522.1,GeneID:1102913;Name=NP_631522.1;Note=SCBAC17A6.08%2C possible phenylacetic acid degradation NADH oxidoreductase PaaE%2C len: 368 aa%3B similar to many e.g. SW:P76081 (PAAE_ECOLI) probable phenylacetic acid degradation NADH oxidoreductase PaaE from Escherichia coli (356 aa) fasta scores%3B opt: 871%2C Z-score: 943.6%2C 39.943%25 identity (40.870%25 ungapped) in 353 aa overlap. Contains Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%3B Pfam match to entry PF00175 NAD_binding%2C Oxidoreductase FAD/NAD-binding domain%3B Pfam match to entry PF00970 FAD_binding_6%2C Oxidoreductase FAD-binding domain and Prosite match to PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;gbkey=CDS;gene=SCBAC17A6.08;product=phenylacetic acid degradation NADH oxidoreductase PaaE;protein_id=NP_631522.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8287000	8287293	.	+	.	ID=id9657;Dbxref=GeneID:1102913;Note=Pfam match to entry PF00970 FAD_binding_6%2C Oxidoreductase FAD-binding domain%2C score 74.00%2C E-value 3.1e-18;gbkey=misc_feature;gene=SCBAC17A6.08
NC_003888.3	RefSeq	sequence_feature	8287309	8287659	.	+	.	ID=id9658;Dbxref=GeneID:1102913;Note=Pfam match to entry PF00175 NAD_binding%2C Oxidoreductase FAD/NAD-binding domain%2C score 64.90%2C E-value 1.7e-15;gbkey=misc_feature;gene=SCBAC17A6.08
NC_003888.3	RefSeq	sequence_feature	8287777	8288013	.	+	.	ID=id9659;Dbxref=GeneID:1102913;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domains%2C score 48.10%2C E-value 2e-10;gbkey=misc_feature;gene=SCBAC17A6.08
NC_003888.3	RefSeq	sequence_feature	8287879	8287905	.	+	.	ID=id9660;Dbxref=GeneID:1102913;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SCBAC17A6.08
NC_003888.3	RefSeq	stem_loop	8288066	8288254	.	+	.	ID=id9661;Note=Score 55: 25/27 ( 92%25) matches%2C 1 gaps. Possible transcriptional terminator.;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8288251	8289468	.	-	.	ID=gene7539;Dbxref=GeneID:1102914;Name=SCBAC17A6.09c;gbkey=Gene;gene=SCBAC17A6.09c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.09c;locus_tag=SCO7476
NC_003888.3	RefSeq	CDS	8288251	8289468	.	-	0	ID=cds7405;Parent=gene7539;Dbxref=Genbank:NP_631523.1,GeneID:1102914;Name=NP_631523.1;Note=SCBAC17A6.09c%2C possible hypothetical protein%2C len: 405aa: no significant database matches. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SCBAC17A6.09c;product=hypothetical protein;protein_id=NP_631523.1;transl_table=11
NC_003888.3	RefSeq	gene	8289725	8291218	.	+	.	ID=gene7540;Dbxref=GeneID:1102915;Name=SCBAC17A6.10;gbkey=Gene;gene=SCBAC17A6.10;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.10;locus_tag=SCO7477
NC_003888.3	RefSeq	CDS	8289725	8291218	.	+	0	ID=cds7406;Parent=gene7540;Dbxref=Genbank:NP_631524.1,GeneID:1102915;Name=NP_631524.1;Note=SCBAC17A6.10%2C possible membrane protein%2C len: 497 aa: no significant database matches. Contains a possible hydrophobic membrane spanning region and Prosite match to PS00216 Sugar transport proteins signature 1.;gbkey=CDS;gene=SCBAC17A6.10;product=hypothetical protein;protein_id=NP_631524.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8290265	8290315	.	+	.	ID=id9662;Dbxref=GeneID:1102915;Note=PS00216 Sugar transport proteins signature 1;gbkey=misc_feature;gene=SCBAC17A6.10
NC_003888.3	RefSeq	gene	8291215	8292117	.	-	.	ID=gene7541;Dbxref=GeneID:1102916;Name=SCBAC17A6.11c;gbkey=Gene;gene=SCBAC17A6.11c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.11c;locus_tag=SCO7478
NC_003888.3	RefSeq	CDS	8291215	8292117	.	-	0	ID=cds7407;Parent=gene7541;Dbxref=Genbank:NP_631525.1,GeneID:1102916;Name=NP_631525.1;Note=SCBAC17A6.11c%2C possible phosphotransferase%2C len: 300aa: similar to many some of which are antibiotic resistance determinants eg. TR:O05841 (EMBL:Z95120) hypothetical protein from Mycobacterium tuberculosis (474 aa) fasta scores%3B opt: 971%2C Z-score: 1047.4%2C 49.315%25 identity (50.000%25 ungapped) in 292 aa overlap and TR:Q53826 (EMBL:U13078) capreomycin phosphotransferase from Streptomyces capreolus (281 aa) fasta scores%3B opt: 162%2C Z-score: 183.1%2C 28.632%25 identity (30.734%25 ungapped) in 234 aa overlap. Contains Pfam match to entry PF01636 APH%2C Aminoglycoside phosphotransferase.;gbkey=CDS;gene=SCBAC17A6.11c;product=phosphotransferase;protein_id=NP_631525.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8291344	8292084	.	-	.	ID=id9663;Dbxref=GeneID:1102916;Note=Pfam match to entry PF01636 APH%2C Aminoglycoside phosphotransferase%2C score -81.40%2C E-value 0.0019;gbkey=misc_feature;gene=SCBAC17A6.11c
NC_003888.3	RefSeq	gene	8292151	8293314	.	-	.	ID=gene7542;Dbxref=GeneID:1102917;Name=SCBAC17A6.12c;gbkey=Gene;gene=SCBAC17A6.12c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.12c;locus_tag=SCO7479
NC_003888.3	RefSeq	CDS	8292151	8293314	.	-	0	ID=cds7408;Parent=gene7542;Dbxref=Genbank:NP_631526.1,GeneID:1102917;Name=NP_631526.1;Note=SCBAC17A6.12c%2C possible integral membrane protein%2C len: 387aa: similar to many eg. TR:Q9FAT6 (EMBL:AB038042) Mrx hypothetical protein associated with macrolide 2'-phosphotransferase I in Escherichia coli plasmid pTZ3509 (412 aa) fasta scores%3B opt: 316%2C Z-score: 317.3%2C 29.873%25 identity (31.978%25 ungapped) in 395 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCBAC17A6.12c;product=hypothetical protein;protein_id=NP_631526.1;transl_table=11
NC_003888.3	RefSeq	gene	8293353	8293976	.	+	.	ID=gene7543;Dbxref=GeneID:1102918;Name=SCBAC17A6.13;gbkey=Gene;gene=SCBAC17A6.13;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.13;locus_tag=SCO7480
NC_003888.3	RefSeq	CDS	8293353	8293976	.	+	0	ID=cds7409;Parent=gene7543;Dbxref=Genbank:NP_631527.1,GeneID:1102918;Name=NP_631527.1;Note=SCBAC17A6.13%2C conserved hypothetical protein%2C len: 207aa: similar to many from streptomycetes eg. TR:Q9L267 (EMBL:AL137778) hypothetical protein SCL2.32 from Streptomyces coelicolor (186 aa) fasta scores%3B opt: 221%2C Z-score: 262.6%2C 31.928%25 identity (32.515%25 ungapped) in 166 aa overlap.;gbkey=CDS;gene=SCBAC17A6.13;product=hypothetical protein;protein_id=NP_631527.1;transl_table=11
NC_003888.3	RefSeq	gene	8293977	8294552	.	-	.	ID=gene7544;Dbxref=GeneID:1102919;Name=SCBAC17A6.14c;gbkey=Gene;gene=SCBAC17A6.14c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.14c;locus_tag=SCO7481
NC_003888.3	RefSeq	CDS	8293977	8294552	.	-	0	ID=cds7410;Parent=gene7544;Dbxref=Genbank:NP_631528.1,GeneID:1102919;Name=NP_631528.1;Note=SCBAC17A6.14c%2C conserved hypothetical protein%2C len: 191aa: similar to many eg. TR:Q9F2L4 (EMBL:AL442629) hypothetical protein from Streptomyces coelicolor (151 aa) fasta scores%3B opt: 588%2C Z-score: 595.0%2C 65.185%25 identity (65.185%25 ungapped) in 135 aa overlap and TR:Q52355 (EMBL:U59239) TerB tellurite resistance protein from Serratia marcescens plasmid R478 (151 aa) fasta scores%3B opt: 240%2C Z-score: 254.3%2C 28.467%25 identity (28.467%25 ungapped) in 137 aa overlap;gbkey=CDS;gene=SCBAC17A6.14c;product=hypothetical protein;protein_id=NP_631528.1;transl_table=11
NC_003888.3	RefSeq	gene	8294744	8295145	.	+	.	ID=gene7545;Dbxref=GeneID:1102920;Name=SCBAC17A6.15;gbkey=Gene;gene=SCBAC17A6.15;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.15;locus_tag=SCO7482
NC_003888.3	RefSeq	CDS	8294744	8295145	.	+	0	ID=cds7411;Parent=gene7545;Dbxref=Genbank:NP_631529.1,GeneID:1102920;Name=NP_631529.1;Note=SCBAC17A6.15%2C possible integral membrane protein%2C len: 133aa: appears to have a motif in common with others eg. TR:Q9L4T7 (EMBL:AF265258) dolichyl-phosphate beta-glucosyltransferase from Rhodococcus sp. S9 (449 aa) fasta scores%3B opt: 215%2C Z-score: 268.3%2C 40.310%25 identity (41.935%25 ungapped) in 129 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCBAC17A6.15;product=hypothetical protein;protein_id=NP_631529.1;transl_table=11
NC_003888.3	RefSeq	gene	8295316	8295723	.	+	.	ID=gene7546;Dbxref=GeneID:1102921;Name=SCBAC17A6.16;gbkey=Gene;gene=SCBAC17A6.16;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.16;locus_tag=SCO7483
NC_003888.3	RefSeq	CDS	8295316	8295723	.	+	0	ID=cds7412;Parent=gene7546;Dbxref=Genbank:NP_631530.1,GeneID:1102921;Name=NP_631530.1;Note=SCBAC17A6.16%2C conserved hypothetical protein%2C len: 135aa: similar to many eg. TR:BAB48518 (EMBL:AP002996) hypothetical protein MLL1058 from Rhizobium loti (148 aa) fasta scores%3B opt: 285%2C Z-score: 348.9%2C 39.850%25 identity (41.732%25 ungapped) in 133 aa overlap. Contains Pfam match to entry PF01042 UPF0076%2C YjgF family.;gbkey=CDS;gene=SCBAC17A6.16;product=hypothetical protein;protein_id=NP_631530.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8295337	8295717	.	+	.	ID=id9664;Dbxref=GeneID:1102921;Note=Pfam match to entry PF01042 UPF0076%2C YjgF family%2C score 65.60%2C E-value 1e-15;gbkey=misc_feature;gene=SCBAC17A6.16
NC_003888.3	RefSeq	gene	8295730	8295966	.	-	.	ID=gene7547;Dbxref=GeneID:1102922;Name=SCBAC17A6.17c;gbkey=Gene;gene=SCBAC17A6.17c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.17c;locus_tag=SCO7484
NC_003888.3	RefSeq	CDS	8295730	8295966	.	-	0	ID=cds7413;Parent=gene7547;Dbxref=Genbank:NP_631531.1,GeneID:1102922;Name=NP_631531.1;Note=SCBAC17A6.17c%2C unknown%2C len: 78 aa: no significant database matches.;gbkey=CDS;gene=SCBAC17A6.17c;product=hypothetical protein;protein_id=NP_631531.1;transl_table=11
NC_003888.3	RefSeq	gene	8295963	8296649	.	-	.	ID=gene7548;Dbxref=GeneID:1102923;Name=SCBAC17A6.18c;gbkey=Gene;gene=SCBAC17A6.18c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.18c;locus_tag=SCO7485
NC_003888.3	RefSeq	CDS	8295963	8296649	.	-	0	ID=cds7414;Parent=gene7548;Dbxref=Genbank:NP_631532.1,GeneID:1102923;Name=NP_631532.1;Note=SCBAC17A6.18c%2C possible oxidoreductase%2C len: 228aa%3B similar to many eg. TR:Q9L2J5 (EMBL:AL137165) oxidoreductase SCF42.24 from Streptomyces coelicolor (295 aa) fasta scores%3B opt: 450%2C Z-score: 508.6%2C 43.850%25 identity (45.304%25 ungapped) in 187 aa overlap and TR:BAB49857 (EMBL:AP003000) probable oxidoreductase from Rhizobium loti (319 aa) fasta scores%3B opt: 243%2C Z-score: 278.7%2C 31.980%25 identity (35.795%25 ungapped) in 197 aa overlap. Contains Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C NAD-binding Rossmann fold.;gbkey=CDS;gene=SCBAC17A6.18c;product=oxidoreductase;protein_id=NP_631532.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8296185	8296538	.	-	.	ID=id9665;Dbxref=GeneID:1102923;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C NAD-binding Rossmann fold%2C score 69.40%2C E-value 7.6e-17;gbkey=misc_feature;gene=SCBAC17A6.18c
NC_003888.3	RefSeq	gene	8296646	8297863	.	-	.	ID=gene7549;Dbxref=GeneID:1102924;Name=SCBAC17A6.19c;gbkey=Gene;gene=SCBAC17A6.19c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.19c;locus_tag=SCO7486
NC_003888.3	RefSeq	CDS	8296646	8297863	.	-	0	ID=cds7415;Parent=gene7549;Dbxref=Genbank:NP_631533.1,GeneID:1102924;Name=NP_631533.1;Note=SCBAC17A6.19c%2C possible ROK-family transcriptional regulator%2C len: 405 aa%3B similar to many e.g. TR:P95610 (EMBL:X99622)  regulator from Rhodococcus erythropolis (397 aa) fasta scores: opt: 548%2C Z-score: 588.4%2C 36.776%25 identity (38.220%25 ungapped) in 397 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family and Prosite match to PS01125 ROK family signature.;gbkey=CDS;gene=SCBAC17A6.19c;product=transcriptional regulator;protein_id=NP_631533.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8297024	8297620	.	-	.	ID=id9666;Dbxref=GeneID:1102924;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 122.50%2C E-value 2.4e-35;gbkey=misc_feature;gene=SCBAC17A6.19c
NC_003888.3	RefSeq	sequence_feature	8297108	8297191	.	-	.	ID=id9667;Dbxref=GeneID:1102924;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SCBAC17A6.19c
NC_003888.3	RefSeq	gene	8297867	8298751	.	-	.	ID=gene7550;Dbxref=GeneID:1102925;Name=SCBAC17A6.20c;gbkey=Gene;gene=SCBAC17A6.20c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.20c;locus_tag=SCO7487
NC_003888.3	RefSeq	CDS	8297867	8298751	.	-	0	ID=cds7416;Parent=gene7550;Dbxref=Genbank:NP_631534.1,GeneID:1102925;Name=NP_631534.1;Note=SCBAC17A6.20c%2C possible integral membrane binding protein dependent transport protein%2C len: 294aa%3B similar to many eg. TR:BAB49483 (EMBL:AP002999) permease of sugar ABC transporter from Rhizobium loti (296 aa) fasta scores: opt: 608%2C Z-score: 696.1%2C 35.570%25 identity (36.934%25 ungapped) in 298 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and multiple hydrophobic possible membrane spanning regions.;gbkey=CDS;gene=SCBAC17A6.20c;product=integral membrane binding protein dependent transport protein;protein_id=NP_631534.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8297996	8298223	.	-	.	ID=id9668;Dbxref=GeneID:1102925;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 73.50%2C E-value 4.4e-18;gbkey=misc_feature;gene=SCBAC17A6.20c
NC_003888.3	RefSeq	sequence_feature	8298134	8298220	.	-	.	ID=id9669;Dbxref=GeneID:1102925;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCBAC17A6.20c
NC_003888.3	RefSeq	gene	8298748	8299779	.	-	.	ID=gene7551;Dbxref=GeneID:1102926;Name=SCBAC17A6.21c;gbkey=Gene;gene=SCBAC17A6.21c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.21c;locus_tag=SCO7488
NC_003888.3	RefSeq	CDS	8298748	8299779	.	-	0	ID=cds7417;Parent=gene7551;Dbxref=Genbank:NP_631535.1,GeneID:1102926;Name=NP_631535.1;Note=SCBAC17A6.21c%2C possible integral membrane binding protein dependent transport protein%2C len: 343aa%3B similar to many eg. SW:Q04698 (MALC_STRPN) maltodextrin transport permease from Streptococcus pneumoniae (435 aa) fasta scores: opt: 376%2C Z-score: 423.7%2C 26.959%25 identity (29.153%25 ungapped) in 319 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C Prosite match to S00402 Binding-protein-dependent transport systems inner membrane comp sign. and multiple hydrophobic possible membrane spanning regions.;gbkey=CDS;gene=SCBAC17A6.21c;product=integral membrane binding protein dependent transport protein;protein_id=NP_631535.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8298865	8299092	.	-	.	ID=id9670;Dbxref=GeneID:1102926;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 63.00%2C E-value 6.3e-15;gbkey=misc_feature;gene=SCBAC17A6.21c
NC_003888.3	RefSeq	sequence_feature	8299003	8299089	.	-	.	ID=id9671;Dbxref=GeneID:1102926;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCBAC17A6.21c
NC_003888.3	RefSeq	gene	8299813	8301216	.	-	.	ID=gene7552;Dbxref=GeneID:1102927;Name=SCBAC17A6.22c;gbkey=Gene;gene=SCBAC17A6.22c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.22c;locus_tag=SCO7489
NC_003888.3	RefSeq	CDS	8299813	8301216	.	-	0	ID=cds7418;Parent=gene7552;Dbxref=Genbank:NP_631536.1,GeneID:1102927;Name=NP_631536.1;Note=SCBAC17A6.22c%2C possible binding protein dependent transport lipoprotein%2C len: 467aa%3B weakly similar to many eg. SW:P76042 (YCJN_ECOLI) ABC transporter from Escherichia coli (430 aa) fasta scores: opt: 346%2C Z-score: 385.6%2C 26.009%25 identity (29.668%25 ungapped) in 446 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=CDS;gene=SCBAC17A6.22c;product=binding protein dependent transport lipoprotein;protein_id=NP_631536.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8299858	8301078	.	-	.	ID=id9672;Dbxref=GeneID:1102927;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 74.60%2C E-value 2e-18;gbkey=misc_feature;gene=SCBAC17A6.22c
NC_003888.3	RefSeq	sequence_feature	8301136	8301168	.	-	.	ID=id9673;Dbxref=GeneID:1102927;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SCBAC17A6.22c
NC_003888.3	RefSeq	gene	8301342	8302487	.	+	.	ID=gene7553;Dbxref=GeneID:1102928;Name=SCBAC17A6.23;gbkey=Gene;gene=SCBAC17A6.23;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.23;locus_tag=SCO7490
NC_003888.3	RefSeq	CDS	8301342	8302487	.	+	0	ID=cds7419;Parent=gene7553;Dbxref=Genbank:NP_631537.1,GeneID:1102928;Name=NP_631537.1;Note=SCBAC17A6.23%2C possible oxidoreductase%2C len: 381aa%3B similar to many eg. TR:Q9F1Z9 (EMBL:AB033991) BtrE from Bacillus circulans (349 aa) fasta scores: opt: 710%2C Z-score: 676.3%2C 38.873%25 identity (41.071%25 ungapped) in 355 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases. N-terminus rich in pro/val/ser.;gbkey=CDS;gene=SCBAC17A6.23;product=oxidoreductase;protein_id=NP_631537.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8301342	8301455	.	+	.	ID=id9674;Dbxref=GeneID:1102928;Note=High content of proline%2C valine and serine amino acid residues;gbkey=misc_feature;gene=SCBAC17A6.23
NC_003888.3	RefSeq	sequence_feature	8301474	8302484	.	+	.	ID=id9675;Dbxref=GeneID:1102928;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 94.00%2C E-value 3e-24;gbkey=misc_feature;gene=SCBAC17A6.23
NC_003888.3	RefSeq	gene	8302514	8303314	.	+	.	ID=gene7554;Dbxref=GeneID:1102929;Name=SCBAC17A6.24;gbkey=Gene;gene=SCBAC17A6.24;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.24;locus_tag=SCO7491
NC_003888.3	RefSeq	CDS	8302514	8303314	.	+	0	ID=cds7420;Parent=gene7554;Dbxref=Genbank:NP_631538.1,GeneID:1102929;Name=NP_631538.1;Note=SCBAC17A6.24%2C conserved hypothetical protein%2C len: 266aa%3B similar to many eg. SW:P76044 (YCJR_ECOLI) hypothetical protein from Escherichia coli (265 aa) fasta scores: opt: 571%2C Z-score: 667.8%2C 36.502%25 identity (37.209%25 ungapped) in 263 aa overlap;gbkey=CDS;gene=SCBAC17A6.24;product=hypothetical protein;protein_id=NP_631538.1;transl_table=11
NC_003888.3	RefSeq	gene	8303311	8304675	.	+	.	ID=gene7555;Dbxref=GeneID:1102930;Name=SCBAC17A6.25;gbkey=Gene;gene=SCBAC17A6.25;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.25;locus_tag=SCO7492
NC_003888.3	RefSeq	CDS	8303311	8304675	.	+	0	ID=cds7421;Parent=gene7555;Dbxref=Genbank:NP_631539.1,GeneID:1102930;Name=NP_631539.1;Note=SCBAC17A6.25%2C unknown%2C len: 454 aa%3B no significant database matches.;gbkey=CDS;gene=SCBAC17A6.25;product=hypothetical protein;protein_id=NP_631539.1;transl_table=11
NC_003888.3	RefSeq	gene	8304672	8306609	.	+	.	ID=gene7556;Dbxref=GeneID:1102931;Name=SCBAC17A6.26;gbkey=Gene;gene=SCBAC17A6.26;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.26;locus_tag=SCO7493
NC_003888.3	RefSeq	CDS	8304672	8306609	.	+	0	ID=cds7422;Parent=gene7556;Dbxref=Genbank:NP_631540.1,GeneID:1102931;Name=NP_631540.1;Note=SCBAC17A6.26%2C conserved hypothetical protein%2C len: 645 aa%3B similar to many e.g. TR:Q9K6N7 (EMBL:AP001519) BH3691 protein from Bacillus halodurans (702 aa) fasta scores: opt: 1188%2C Z-score: 1277.9%2C 34.802%25 identity (37.175%25 ungapped) in 658 aa overlap;gbkey=CDS;gene=SCBAC17A6.26;product=hypothetical protein;protein_id=NP_631540.1;transl_table=11
NC_003888.3	RefSeq	gene	8306615	8307055	.	-	.	ID=gene7557;Dbxref=GeneID:1102932;Name=SCBAC17A6.27c;gbkey=Gene;gene=SCBAC17A6.27c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.27c;locus_tag=SCO7494
NC_003888.3	RefSeq	CDS	8306615	8307055	.	-	0	ID=cds7423;Parent=gene7557;Dbxref=Genbank:NP_631541.1,GeneID:1102932;Name=NP_631541.1;Note=SCBAC17A6.27c%2C possible membrane protein%2C len: 146aa%3B no significant database matches. Contains possible membrane spanning regions.;gbkey=CDS;gene=SCBAC17A6.27c;product=hypothetical protein;protein_id=NP_631541.1;transl_table=11
NC_003888.3	RefSeq	gene	8307194	8308025	.	+	.	ID=gene7558;Dbxref=GeneID:1102933;Name=SCBAC17A6.28;gbkey=Gene;gene=SCBAC17A6.28;gene_biotype=pseudogene;gene_synonym=SCBAC17A6.28;locus_tag=SCO7495;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8307194	8308025	.	+	.	ID=id9676;Dbxref=PSEUDO:CAD55404.1,GeneID:1102933;Note=pseudogene%2C hypothetical protein%3BSCBAC17A6.28%2C unknown pseudogene%2C len: 279aa%3B no significant database matches. Contains two frameshifts%2C predicted using GC frameplot.;gbkey=misc_feature;gene=SCBAC17A6.28
NC_003888.3	RefSeq	gene	8308033	8308884	.	-	.	ID=gene7559;Dbxref=GeneID:1102934;Name=SCBAC17A6.29c;gbkey=Gene;gene=SCBAC17A6.29c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.29c;locus_tag=SCO7496
NC_003888.3	RefSeq	CDS	8308033	8308884	.	-	0	ID=cds7424;Parent=gene7559;Dbxref=Genbank:NP_631542.1,GeneID:1102934;Name=NP_631542.1;Note=SCBAC17A6.29c%2C conserved hypothetical integral membrane protein%2C len: aa%3B similar to many e.g. TR:Q9I5E8 (EMBL:AE004514) hypothetical protein from Pseudomonas aeruginosa (271 aa) fasta scores: opt: 560%2C Z-score: 552.2%2C 44.944%25 identity (48.387%25 ungapped) in 267 aa overlap. Contains multiple hydrophobic possible membrane spanning regions;gbkey=CDS;gene=SCBAC17A6.29c;product=hypothetical protein;protein_id=NP_631542.1;transl_table=11
NC_003888.3	RefSeq	gene	8308924	8309703	.	+	.	ID=gene7560;Dbxref=GeneID:1102935;Name=SCBAC17A6.30;gbkey=Gene;gene=SCBAC17A6.30;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.30;locus_tag=SCO7497
NC_003888.3	RefSeq	CDS	8308924	8309703	.	+	0	ID=cds7425;Parent=gene7560;Dbxref=Genbank:NP_631543.1,GeneID:1102935;Name=NP_631543.1;Note=SCBAC17A6.30%2C possible transcriptional regulator%2C len: 259 aa%3B similar to many e.g. TR:Q9I5E7 (EMBL:AE004514) probable transcriptional regulator from Pseudomonas aeruginosa (262 aa) fasta scores: opt: 796%2C Z-score: 924.9%2C 48.077%25 identity in 260 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and Prosite match to PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=CDS;gene=SCBAC17A6.30;product=transcriptional regulator;protein_id=NP_631543.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8309431	8309685	.	+	.	ID=id9677;Dbxref=GeneID:1102935;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 48.10%2C E-value 1.9e-10;gbkey=misc_feature;gene=SCBAC17A6.30
NC_003888.3	RefSeq	sequence_feature	8309542	8309664	.	+	.	ID=id9678;Dbxref=GeneID:1102935;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SCBAC17A6.30
NC_003888.3	RefSeq	stem_loop	8309707	8309898	.	+	.	ID=id9679;Note=Score 59: 25/29 ( 86%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8309894	8310544	.	-	.	ID=gene7561;Dbxref=GeneID:1102936;Name=SCBAC17A6.31c;gbkey=Gene;gene=SCBAC17A6.31c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.31c;locus_tag=SCO7498
NC_003888.3	RefSeq	CDS	8309894	8310544	.	-	0	ID=cds7426;Parent=gene7561;Dbxref=Genbank:NP_631544.1,GeneID:1102936;Name=NP_631544.1;Note=SCBAC17A6.31c%2C possible transcriptional regulator%2C len: 216 aa%3B similar to many from Streptomyces coelicolor eg. TR:O50514 (EMBL:AL009204) transcriptional regulator (231 aa) opt: 338%2C Z-score: 380.0%2C 37.321%25 identity (38.614%25 ungapped) in 209 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and Prosite match to PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=CDS;gene=SCBAC17A6.31c;product=transcriptional regulator;protein_id=NP_631544.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8310329	8310505	.	-	.	ID=id9680;Dbxref=GeneID:1102936;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 59.50%2C E-value 7.8e-17;gbkey=misc_feature;gene=SCBAC17A6.31c
NC_003888.3	RefSeq	sequence_feature	8310377	8310451	.	-	.	ID=id9681;Dbxref=GeneID:1102936;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCBAC17A6.31c
NC_003888.3	RefSeq	gene	8310669	8311394	.	-	.	ID=gene7562;Dbxref=GeneID:1102937;Name=SCBAC17A6.32c;gbkey=Gene;gene=SCBAC17A6.32c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.32c;locus_tag=SCO7499
NC_003888.3	RefSeq	CDS	8310669	8311394	.	-	0	ID=cds7427;Parent=gene7562;Dbxref=Genbank:NP_631545.1,GeneID:1102937;Name=NP_631545.1;Note=SCBAC17A6.32c%2C possible racemase%2C len: 241aa%3B similar to SW:Q00924 (HYUE_PSESN) hydantoin racemase from the native plasmid of Pseudomonas sp. strain NS671 (249 aa) fasta scores: opt: 564%2C Z-score: 617.1%2C 39.574%25 identity (39.744%25 ungapped) in 235 aa overlap;gbkey=CDS;gene=SCBAC17A6.32c;product=racemase;protein_id=NP_631545.1;transl_table=11
NC_003888.3	RefSeq	gene	8311492	8312979	.	-	.	ID=gene7563;Dbxref=GeneID:1102938;Name=SCBAC17A6.33c;gbkey=Gene;gene=SCBAC17A6.33c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.33c;locus_tag=SCO7500
NC_003888.3	RefSeq	CDS	8311492	8312979	.	-	0	ID=cds7428;Parent=gene7563;Dbxref=Genbank:NP_631546.1,GeneID:1102938;Name=NP_631546.1;Note=SCBAC17A6.33c%2C possible allantoin permease%2C len: 495aa%3B similar to many eg. SW:P75712 (ALLP_ECOLI) allantoin permease from Escherichia coli (484 aa) fasta scores: opt: 807%2C Z-score: 872.9%2C 29.622%25 identity (30.454%25 ungapped) in 476 aa overlap. Contains Pfam match to entry PF02133 Transp_cyt_pur%2C Permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin and multiple hydrophobic possible membrane spanning regions.;gbkey=CDS;gene=SCBAC17A6.33c;product=allantoin permease;protein_id=NP_631546.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8311588	8312895	.	-	.	ID=id9682;Dbxref=GeneID:1102938;Note=Pfam match to entry PF02133 Transp_cyt_pur%2C Permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin%2C score 244.00%2C E-value 3.7e-70;gbkey=misc_feature;gene=SCBAC17A6.33c
NC_003888.3	RefSeq	gene	8313196	8314671	.	+	.	ID=gene7564;Dbxref=GeneID:1102939;Name=SCBAC17A6.34;gbkey=Gene;gene=SCBAC17A6.34;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.34;locus_tag=SCO7501
NC_003888.3	RefSeq	CDS	8313196	8314671	.	+	0	ID=cds7429;Parent=gene7564;Dbxref=Genbank:NP_631547.1,GeneID:1102939;Name=NP_631547.1;Note=SCBAC17A6.34%2C possible hydrolase%2C len: 491 aa%3B similar to many e.g. TR:P82594 (EMBL:AB023626) alpha-L-arabinofuranosidase from Streptomyces chartreusis GS901 (328 aa) fasta scores: opt: 386%2C Z-score: 429.4%2C 31.333%25 identity (33.571%25 ungapped) in 300 aa overlap. Contains a possible hydrophobic membrane spanning region;gbkey=CDS;gene=SCBAC17A6.34;product=hydrolase;protein_id=NP_631547.1;transl_table=11
NC_003888.3	RefSeq	gene	8314675	8315715	.	-	.	ID=gene7565;Dbxref=GeneID:1102940;Name=SCBAC17A6.35c;gbkey=Gene;gene=SCBAC17A6.35c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.35c;locus_tag=SCO7502
NC_003888.3	RefSeq	CDS	8314675	8315715	.	-	0	ID=cds7430;Parent=gene7565;Dbxref=Genbank:NP_631548.1,GeneID:1102940;Name=NP_631548.1;Note=SCBAC17A6.35c%2C possible LacI-family transcriptional regulator%2C len: 346 aa%3B similar to many e.g. SW:P46828 (CCPA_BACME) glucose-resistance amylase regulator CcpA from Bacillus megaterium (332 aa) fasta scores: opt: 528%2C Z-score: 565.6%2C 30.769%25 identity (31.902%25 ungapped) in 338 aa overlap and TR:Q9K433 (EMBL:AL359779) LacI-family transcriptional regulator from Streptomyces coelicolor (340 aa) fasta scores: opt: 993%2C Z-score: 1055.5%2C 49.422%25 identity (51.506%25 ungapped) in 346 aa overlap. Contains Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family%3B Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and Prosite match to PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=CDS;gene=SCBAC17A6.35c;product=LacI family transcriptional regulator;protein_id=NP_631548.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8314702	8315535	.	-	.	ID=id9683;Dbxref=GeneID:1102940;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 76.20%2C E-value 6.7e-19;gbkey=misc_feature;gene=SCBAC17A6.35c
NC_003888.3	RefSeq	sequence_feature	8315629	8315712	.	-	.	ID=id9684;Dbxref=GeneID:1102940;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 30.40%2C E-value 4.8e-07;gbkey=misc_feature;gene=SCBAC17A6.35c
NC_003888.3	RefSeq	sequence_feature	8315644	8315700	.	-	.	ID=id9685;Dbxref=GeneID:1102940;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature;gbkey=misc_feature;gene=SCBAC17A6.35c
NC_003888.3	RefSeq	gene	8315906	8317243	.	+	.	ID=gene7566;Dbxref=GeneID:1102941;Name=SCBAC17A6.36;gbkey=Gene;gene=SCBAC17A6.36;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.36;locus_tag=SCO7503
NC_003888.3	RefSeq	CDS	8315906	8317243	.	+	0	ID=cds7431;Parent=gene7566;Dbxref=Genbank:NP_631549.1,GeneID:1102941;Name=NP_631549.1;Note=SCBAC17A6.36%2C extracellular solute-binding protein%2C len: 445aa%3B similar to many eg. TR:Q9L0B2 (EMBL:AL163003)  sugar transporter sugar binding protein from Streptomyces coelicolor (452 aa) fasta scores: opt: 853%2C Z-score: 952.9%2C 37.275%25 identity (38.259%25 ungapped) in 389 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and a possible N-terminal signal sequence.;gbkey=CDS;gene=SCBAC17A6.36;product=extracellular solute-binding protein;protein_id=NP_631549.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8316077	8317189	.	+	.	ID=id9686;Dbxref=GeneID:1102941;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 60.00%2C E-value 5.2e-14;gbkey=misc_feature;gene=SCBAC17A6.36
NC_003888.3	RefSeq	gene	8317256	8318206	.	+	.	ID=gene7567;Dbxref=GeneID:1102942;Name=SCBAC17A6.37;gbkey=Gene;gene=SCBAC17A6.37;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.37;locus_tag=SCO7504
NC_003888.3	RefSeq	CDS	8317256	8318206	.	+	0	ID=cds7432;Parent=gene7567;Dbxref=Genbank:NP_631550.1,GeneID:1102942;Name=NP_631550.1;Note=SCBAC17A6.37%2C possible integral membrane binding-protein-dependent transport protein%2C len: 316aa%3B similar to many eg. TR:Q9L0B3 (EMBL:AL163003) sugar transporter integral membrane protein from Streptomyces coelicolor (313 aa) fasta scores: opt: 949%2C Z-score: 1058.2%2C 48.867%25 identity (50.671%25 ungapped) in 309 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%3B Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and multiple hydrophobic possible membrane spanning regions.;gbkey=CDS;gene=SCBAC17A6.37;product=integral membrane binding-protein-dependent transport protein;protein_id=NP_631550.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8317868	8318089	.	+	.	ID=id9687;Dbxref=GeneID:1102942;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 51.00%2C E-value 2.6e-11;gbkey=misc_feature;gene=SCBAC17A6.37
NC_003888.3	RefSeq	sequence_feature	8317871	8317957	.	+	.	ID=id9688;Dbxref=GeneID:1102942;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCBAC17A6.37
NC_003888.3	RefSeq	gene	8318209	8319108	.	+	.	ID=gene7568;Dbxref=GeneID:1102943;Name=SCBAC17A6.38;gbkey=Gene;gene=SCBAC17A6.38;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.38;locus_tag=SCO7505
NC_003888.3	RefSeq	CDS	8318209	8319108	.	+	0	ID=cds7433;Parent=gene7568;Dbxref=Genbank:NP_631551.1,GeneID:1102943;Name=NP_631551.1;Note=SCBAC17A6.38%2C possible integral membrane binding-protein-dependent transport protein%2C len: 299aa%3B similar to many eg. TR:Q9L0B4 (EMBL:AL163003) sugar transporter integral membrane protein from Streptomyces coelicolor (313 aa) fasta scores: opt: 905%2C Z-score: 1049.4%2C 50.000%25 identity (51.799%25 ungapped) in 288 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%3B Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and multiple hydrophobic possible membrane spanning regions.;gbkey=CDS;gene=SCBAC17A6.38;product=integral membrane binding-protein-dependent transport protein;protein_id=NP_631551.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8318752	8318976	.	+	.	ID=id9689;Dbxref=GeneID:1102943;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 80.80%2C E-value 2.8e-20;gbkey=misc_feature;gene=SCBAC17A6.38
NC_003888.3	RefSeq	sequence_feature	8318755	8318841	.	+	.	ID=id9690;Dbxref=GeneID:1102943;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCBAC17A6.38
NC_003888.3	RefSeq	gene	8319174	8320994	.	+	.	ID=gene7569;Dbxref=GeneID:1102944;Name=SCBAC17A6.39;gbkey=Gene;gene=SCBAC17A6.39;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.39;locus_tag=SCO7506
NC_003888.3	RefSeq	CDS	8319174	8320994	.	+	0	ID=cds7434;Parent=gene7569;Dbxref=Genbank:NP_631552.1,GeneID:1102944;Name=NP_631552.1;Note=SCBAC17A6.39%2C possible hydrolase%2C len: 606 aa%3B similar to many e.g. TR:Q9AHJ8 (EMBL:AF305888) beta-glucuronidase from Lactobacillus gasseri (598 aa) fasta scores: opt: 437%2C Z-score: 491.4%2C 25.054%25 identity (27.913%25 ungapped) in 459 aa overlap. Contains Pfam match to entry PF02837 Glyco_hydro_2_N%2C Glycosyl hydrolases family 2%2C sugar binding domain%3B Pfam match to entry PF00703 Glyco_hydro_2%2C Glycosyl hydrolases family 2%2C immunoglobulin-like beta-sandwich domain and Pfam match to entry PF02836 Glyco_hydro_2_C%2C Glycosyl hydrolases family 2%2C TIM barrel domain.;gbkey=CDS;gene=SCBAC17A6.39;product=hydrolase;protein_id=NP_631552.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8319183	8319716	.	+	.	ID=id9691;Dbxref=GeneID:1102944;Note=Pfam match to entry PF02837 Glyco_hydro_2_N%2C Glycosyl hydrolases family 2%2C sugar binding domain%2C score -36.10%2C E-value 0.00046;gbkey=misc_feature;gene=SCBAC17A6.39
NC_003888.3	RefSeq	sequence_feature	8319720	8320025	.	+	.	ID=id9692;Dbxref=GeneID:1102944;Note=Pfam match to entry PF00703 Glyco_hydro_2%2C Glycosyl hydrolases family 2%2C immunoglobulin-like beta-sandwich domain%2C score 7.40%2C E-value 0.0083;gbkey=misc_feature;gene=SCBAC17A6.39
NC_003888.3	RefSeq	sequence_feature	8320029	8320973	.	+	.	ID=id9693;Dbxref=GeneID:1102944;Note=Pfam match to entry PF02836 Glyco_hydro_2_C%2C Glycosyl hydrolases family 2%2C TIM barrel domain%2C score -118.10%2C E-value 0.003;gbkey=misc_feature;gene=SCBAC17A6.39
NC_003888.3	RefSeq	gene	8321047	8321994	.	-	.	ID=gene7570;Dbxref=GeneID:1102945;Name=SCBAC17A6.40c;gbkey=Gene;gene=SCBAC17A6.40c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.40c;locus_tag=SCO7507
NC_003888.3	RefSeq	CDS	8321047	8321994	.	-	0	ID=cds7435;Parent=gene7570;Dbxref=Genbank:NP_631553.1,GeneID:1102945;Name=NP_631553.1;Note=SCBAC17A6.40c%2C possible dioxygenase%2C len: 315 aa%3B similar to many eg. SW:P37610 (TAUD_ECOLI) alpha-ketoglutarate-dependent taurine dioxygenase from Escherichia coli (282 aa) fasta scores: opt: 786%2C Z-score: 906.3%2C 44.245%25 identity (45.556%25 ungapped) in 278 aa overlap. Contains Pfam match to entry PF02668 TauD%2C Taurine catabolism dioxygenase TauD%2C TfdA family.;gbkey=CDS;gene=SCBAC17A6.40c;product=dioxygenase;protein_id=NP_631553.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8321050	8321856	.	-	.	ID=id9694;Dbxref=GeneID:1102945;Note=Pfam match to entry PF02668 TauD%2C Taurine catabolism dioxygenase TauD%2C TfdA family%2C score 234.40%2C E-value 1.6e-66;gbkey=misc_feature;gene=SCBAC17A6.40c
NC_003888.3	RefSeq	gene	8322307	8323140	.	-	.	ID=gene7571;Dbxref=GeneID:1102946;Name=SCBAC17A6.41c;gbkey=Gene;gene=SCBAC17A6.41c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.41c;locus_tag=SCO7508
NC_003888.3	RefSeq	CDS	8322307	8323140	.	-	0	ID=cds7436;Parent=gene7571;Dbxref=Genbank:NP_631554.1,GeneID:1102946;Name=NP_631554.1;Note=SCBAC17A6.41c%2C conserved hypothetical protein%2C len: 277 aa%3B similar to many e.g. TR:AAK49792 (EMBL:AF228583) hypothetical protein from Burkholderia pseudomallei (278 aa) fasta scores: opt: 1084%2C Z-score: 1298.6%2C 55.636%25 identity (56.044%25 ungapped) in 275 aa overlap;gbkey=CDS;gene=SCBAC17A6.41c;product=hypothetical protein;protein_id=NP_631554.1;transl_table=11
NC_003888.3	RefSeq	gene	8323180	8324658	.	-	.	ID=gene7572;Dbxref=GeneID:1102947;Name=SCBAC17A6.42c;gbkey=Gene;gene=SCBAC17A6.42c;gene_biotype=protein_coding;gene_synonym=SCBAC17A6.42c,SCBAC25F8.01c;locus_tag=SCO7509
NC_003888.3	RefSeq	CDS	8323180	8324658	.	-	0	ID=cds7437;Parent=gene7572;Dbxref=Genbank:NP_733735.1,GeneID:1102947;Name=NP_733735.1;Note=SCBAC25F8.01c%2C conserved hypothetical protein (fragment)%2C len: >291 aa%3B similar to TR:AAK48168 (EMBL:AE007177) Mycobacterium tuberculosis CDC1551 hypothetical 56.9 kDa protein MT3801%2C 509 aa%3B fasta scores: opt: 1078 Z-score: 1264.7 bits: 242.8 E(): 7.8e-63%3B 52.577%25 identity in 291 aa overlap and to TR:CAC32297 (EMBL:AL583943) Streptomyces coelicolor conserved hypothetical protein SC10A9.15c%2C 506 aa%3B fasta scores: opt: 1071 Z-score: 1149.0 bits: 221.3 E(): 2.8e-58%3B 54.639%25 identity in 291 aa overlap~SCBAC17A6.42c%2C conserved hypothetical protein%2C len: >234aa%3B similar to C-terminal region of TR:Q9AK89 (EMBL:AL583943) conserved hypothetical protein from Streptomyces coelicolor (505 aa) fasta scores: opt: 907%2C Z-score: 1080.6%2C 55.649%25 identity (57.826%25 ungapped) in 239 aa overlap and TR:O69666 (EMBL:AL022121) hypothetical protein from Mycobacterium tuberculosis (509 aa) fasta scores: opt: 904%2C Z-score: 1077.0%2C 57.511%25 identity (58.772%25 ungapped) in 233 aa overlap.;gbkey=CDS;gene=SCBAC17A6.42c;product=hypothetical protein;protein_id=NP_733735.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8324663	8324667	.	-	.	ID=id9695;gbkey=RBS
NC_003888.3	RefSeq	stem_loop	8324741	8324779	.	-	.	ID=id9696;Note=possible stem loop. Score 51: 17/17 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8324810	8325307	.	-	.	ID=gene7573;Dbxref=GeneID:1102948;Name=cypH;gbkey=Gene;gene=cypH;gene_biotype=protein_coding;gene_synonym=cypH,SCBAC25F8.02c;locus_tag=SCO7510
NC_003888.3	RefSeq	CDS	8324810	8325307	.	-	0	ID=cds7438;Parent=gene7573;Dbxref=Genbank:NP_631555.1,GeneID:1102948;Name=NP_631555.1;Note=SCBAC25F8.02c%2C cypH%2C peptidyl-prolyl cis-trans isomerase%2C len: 165 aa%3B highly similar to SW:CYPH_YEAST (EMBL:X17505) Saccharomyces cerevisiae peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Cpr1 or Cyp1 or Cph1 or Scc1 or YDR155C%2C 161 aa%3B fasta scores: opt: 798 Z-score: 947.8 bits: 181.7 E(): 3.5e-45%3B 70.988%25 identity in 162 aa overlap. Contains Pfam match to entry PF00160 pro_isomerase%2C Cyclophilin type peptidyl-prolyl cis-trans isomerase and matches to Prosite entries PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature and 2x PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=cypH;product=peptidyl-prolyl cis-trans isomerase;protein_id=NP_631555.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8324813	8325295	.	-	.	ID=id9697;Dbxref=GeneID:1102948;Note=Pfam match to entry PF00160 pro_isomerase%2C Cyclophilin type peptidyl-prolyl cis-trans isomerase%2C score 360.80%2C E-value 1.4e-104;gbkey=misc_feature;gene=cypH
NC_003888.3	RefSeq	sequence_feature	8324849	8324872	.	-	.	ID=id9698;Dbxref=GeneID:1102948;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cypH
NC_003888.3	RefSeq	sequence_feature	8325077	8325100	.	-	.	ID=id9699;Dbxref=GeneID:1102948;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=cypH
NC_003888.3	RefSeq	sequence_feature	8325113	8325166	.	-	.	ID=id9700;Dbxref=GeneID:1102948;Note=PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature;gbkey=misc_feature;gene=cypH
NC_003888.3	RefSeq	gene	8325357	8326355	.	-	.	ID=gene7574;Dbxref=GeneID:1102949;Name=gap2;gbkey=Gene;gene=gap2;gene_biotype=protein_coding;gene_synonym=gap2,SCBAC25F8.03c;locus_tag=SCO7511
NC_003888.3	RefSeq	CDS	8325357	8326355	.	-	0	ID=cds7439;Parent=gene7574;Dbxref=Genbank:NP_631556.1,GeneID:1102949;Name=NP_631556.1;Note=SCBAC25F8.03%2C gap2%2C glyceraldehyde 3-phosphate dehydrogenase%2C len: 332 aa%3B highly similar to SW:G3P_STRAU (EMBL:U21191) Streptomyces aureofaciens glyceraldehyde 3-phosphate dehydrogenase (EC 1.2.1.12) Gap%2C 332 aa%3B fasta scores: opt: 1898 Z-score: 2070.6 bits: 391.5 E(): 1e-107%3B 88.855%25 identity in 332 aa overlap and to TR:CAB38137 (EMBL:AL035591) Streptomyces coelicolor glyceraldehyde 3-phosphate dehydrogenase Gap or SCC54.07c%2C 337 aa%3B fasta scores: opt: 1272 Z-score: 1174.4 bits: 225.7 E(): 1.1e-59%3B 57.831%25 identity in 332 aa overlap. Contains Pfam matches to entries PF00044 gpdh%2C Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain and PF02800 gpdh_C%2C Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain and match to Prosite entry PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site;gbkey=CDS;gene=gap2;product=glyceraldehyde 3-phosphate dehydrogenase;protein_id=NP_631556.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8325420	8325899	.	-	.	ID=id9701;Dbxref=GeneID:1102949;Note=Pfam match to entry PF02800 gpdh_C%2C Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%2C score 313.50%2C E-value 2.5e-90;gbkey=misc_feature;gene=gap2
NC_003888.3	RefSeq	sequence_feature	8325885	8325908	.	-	.	ID=id9702;Dbxref=GeneID:1102949;Note=PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site;gbkey=misc_feature;gene=gap2
NC_003888.3	RefSeq	sequence_feature	8325900	8326355	.	-	.	ID=id9703;Dbxref=GeneID:1102949;Note=Pfam match to entry PF00044 gpdh%2C Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain%2C score 300.90%2C E-value 4.9e-124;gbkey=misc_feature;gene=gap2
NC_003888.3	RefSeq	gene	8326492	8327448	.	-	.	ID=gene7575;Dbxref=GeneID:1102950;Name=SCBAC25F8.04c;gbkey=Gene;gene=SCBAC25F8.04c;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.04c;locus_tag=SCO7512
NC_003888.3	RefSeq	CDS	8326492	8327448	.	-	0	ID=cds7440;Parent=gene7575;Dbxref=Genbank:NP_631557.1,GeneID:1102950;Name=NP_631557.1;Note=SCBAC25F8.04c%2C probable AraC-family transcriptional regulator%2C len: 318 aa%3B highly similar to TR:Q53603 (EMBL:U21191) Streptomyces aureofaciens transcriptional activator GapR%2C 278 aa%3B fasta scores: opt: 1641 Z-score: 1807.9 bits: 342.5 E(): 4.3e-93%3B 88.849%25 identity in 278 aa overlap. Contains Pfam matches to entries PF01965 ThiJ%2C ThiJ/PfpI family and PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and match to Prosite entry PS00041 Bacterial regulatory proteins%2C araC family signature. Also contains possible helix-turn-helix motif at residues 229..250 (+3.56 SD);gbkey=CDS;gene=SCBAC25F8.04c;product=AraC family transcription regulator;protein_id=NP_631557.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8326507	8326767	.	-	.	ID=id9704;Dbxref=GeneID:1102950;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 67.90%2C E-value 2.2e-16;gbkey=misc_feature;gene=SCBAC25F8.04c
NC_003888.3	RefSeq	sequence_feature	8326528	8326656	.	-	.	ID=id9705;Dbxref=GeneID:1102950;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SCBAC25F8.04c
NC_003888.3	RefSeq	sequence_feature	8326921	8327430	.	-	.	ID=id9706;Dbxref=GeneID:1102950;Note=Pfam match to entry PF01965 ThiJ%2C ThiJ/PfpI family%2C score 80.00%2C E-value 5e-20;gbkey=misc_feature;gene=SCBAC25F8.04c
NC_003888.3	RefSeq	gene	8327480	8328367	.	-	.	ID=gene7576;Dbxref=GeneID:1102951;Name=SCBAC25F8.05c;gbkey=Gene;gene=SCBAC25F8.05c;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.05c;locus_tag=SCO7513
NC_003888.3	RefSeq	CDS	8327480	8328367	.	-	0	ID=cds7441;Parent=gene7576;Dbxref=Genbank:NP_631558.1,GeneID:1102951;Name=NP_631558.1;Note=SCBAC25F8.05c%2C possible  hydrolase%2C len: 295 aa%3B similar to TR:Q9S2A5 (EMBL:AL096849) Streptomyces coelicolor   hydrolase SCI11.14c%2C 268 aa%3B fasta scores: opt: 215 Z-score: 250.2 bits: 54.2 E(): 2.5e-06%3B 29.304%25 identity in 273 aa overlap. Contains Pfam match to entry PF00657 Lipase_GDSL%2C Lipase/Acylhydrolase with GDSL-like motif and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC25F8.05c;product=hydrolase;protein_id=NP_631558.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8327966	8328247	.	-	.	ID=id9707;Dbxref=GeneID:1102951;Note=Pfam match to entry PF00657 Lipase_GDSL%2C Lipase/Acylhydrolase with GDSL-like motif%2C score 1.90%2C E-value 0.016;gbkey=misc_feature;gene=SCBAC25F8.05c
NC_003888.3	RefSeq	gene	8328549	8329049	.	+	.	ID=gene7577;Dbxref=GeneID:1102952;Name=SCBAC25F8.06;gbkey=Gene;gene=SCBAC25F8.06;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.06;locus_tag=SCO7514
NC_003888.3	RefSeq	CDS	8328549	8329049	.	+	0	ID=cds7442;Parent=gene7577;Dbxref=Genbank:NP_631559.1,GeneID:1102952;Name=NP_631559.1;Note=SCBAC25F8.06%2C possible integral membrane protein%2C len: 166 aa%3B similar to TR:Q9RIW7 (EMBL:AL121854) Streptomyces coelicolor  transmembrane transport protein SCJ33.11%2C 163 aa%3B fasta scores: opt: 262 Z-score: 315.0 bits: 64.6 E(): 6.2e-10%3B 35.393%25 identity in 178 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC25F8.06;product=hypothetical protein;protein_id=NP_631559.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8329337	8329341	.	+	.	ID=id9708;gbkey=RBS
NC_003888.3	RefSeq	gene	8329348	8329917	.	+	.	ID=gene7578;Dbxref=GeneID:1102953;Name=SCBAC25F8.07;gbkey=Gene;gene=SCBAC25F8.07;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.07;locus_tag=SCO7515
NC_003888.3	RefSeq	CDS	8329348	8329917	.	+	0	ID=cds7443;Parent=gene7578;Dbxref=Genbank:NP_631560.1,GeneID:1102953;Name=NP_631560.1;Note=SCBAC25F8.07%2C unknown%2C len: 189 aa;gbkey=CDS;gene=SCBAC25F8.07;product=hypothetical protein;protein_id=NP_631560.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8329956	8329960	.	+	.	ID=id9709;gbkey=RBS
NC_003888.3	RefSeq	gene	8329972	8331888	.	+	.	ID=gene7579;Dbxref=GeneID:1102954;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;gene_synonym=htpG,SCBAC25F8.08;locus_tag=SCO7516
NC_003888.3	RefSeq	CDS	8329972	8331888	.	+	0	ID=cds7444;Parent=gene7579;Dbxref=Genbank:NP_631561.1,GeneID:1102954;Name=NP_631561.1;Note=molecular chaperone;gbkey=CDS;gene=htpG;product=heat shock protein 90;protein_id=NP_631561.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8330041	8330070	.	+	.	ID=id9710;Dbxref=GeneID:1102954;Note=PS00298 Heat shock hsp90 proteins family signature;gbkey=misc_feature;gene=htpG
NC_003888.3	RefSeq	sequence_feature	8330047	8330520	.	+	.	ID=id9711;Dbxref=GeneID:1102954;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C phytochrome-like ATPase%2C score 26.00%2C E-value 8.4e-06;gbkey=misc_feature;gene=htpG
NC_003888.3	RefSeq	sequence_feature	8330539	8330616	.	+	.	ID=id9712;Dbxref=GeneID:1102954;Note=Pfam match to entry PF00183 HSP90%2C Hsp90 protein%2C score 26.40%2C E-value 1e-06;gbkey=misc_feature;gene=htpG
NC_003888.3	RefSeq	sequence_feature	8330656	8331849	.	+	.	ID=id9713;Dbxref=GeneID:1102954;Note=Pfam match to entry PF00183 HSP90%2C Hsp90 protein%2C score 503.80%2C E-value 1.3e-147;gbkey=misc_feature;gene=htpG
NC_003888.3	RefSeq	ribosome_entry_site	8332206	8332209	.	+	.	ID=id9714;gbkey=RBS
NC_003888.3	RefSeq	gene	8332218	8333516	.	+	.	ID=gene7580;Dbxref=GeneID:1102955;Name=SCBAC25F8.09;gbkey=Gene;gene=SCBAC25F8.09;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.09;locus_tag=SCO7517
NC_003888.3	RefSeq	CDS	8332218	8333516	.	+	0	ID=cds7445;Parent=gene7580;Dbxref=Genbank:NP_631562.1,GeneID:1102955;Name=NP_631562.1;Note=SCBAC25F8.09%2C possible integral membrane protein%2C len: 432 aa%3B similar to TR:Q9HTD6 (EMBL:AE004955) Pseudomonas aeruginosa hypothetical protein PA5430%2C 404 aa%3B fasta scores: opt: 1026 Z-score: 917.9 bits: 178.8 E(): 1.6e-43%3B 43.557%25 identity in 388 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC25F8.09;product=hypothetical protein;protein_id=NP_631562.1;transl_table=11
NC_003888.3	RefSeq	gene	8333583	8334140	.	-	.	ID=gene7581;Dbxref=GeneID:1102956;Name=SCBAC25F8.10c;gbkey=Gene;gene=SCBAC25F8.10c;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.10c;locus_tag=SCO7518
NC_003888.3	RefSeq	CDS	8333583	8334140	.	-	0	ID=cds7446;Parent=gene7581;Dbxref=Genbank:NP_631563.1,GeneID:1102956;Name=NP_631563.1;Note=SCBAC25F8.10c%2C possible tetR-family transcriptional regulatory protein%2C len: 185 aa%3B similar to TR:Q9F2S8 (EMBL:AL392176) Streptomyces coelicolor tetR-family transcriptional regulatory protein SCD65.04c%2C 185 aa%3B fasta scores: opt: 501 Z-score: 575.5 bits: 113.1 E(): 1.9e-24%3B 44.134%25 identity in 179 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 30..51 (+2.59 SD);gbkey=CDS;gene=SCBAC25F8.10c;product=TetR family transcriptional regulator;protein_id=NP_631563.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8333961	8334101	.	-	.	ID=id9715;Dbxref=GeneID:1102956;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 53.50%2C E-value 2.9e-12;gbkey=misc_feature;gene=SCBAC25F8.10c
NC_003888.3	RefSeq	gene	8334151	8334732	.	-	.	ID=gene7582;Dbxref=GeneID:1102957;Name=SCBAC25F8.11c;gbkey=Gene;gene=SCBAC25F8.11c;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.11c;locus_tag=SCO7519
NC_003888.3	RefSeq	CDS	8334151	8334732	.	-	0	ID=cds7447;Parent=gene7582;Dbxref=Genbank:NP_631564.1,GeneID:1102957;Name=NP_631564.1;Note=SCBAC25F8.11c%2C probable sugar acetyltransferase%2C len: 193 aa%3B similar to SW:MAA_ECOLI (EMBL:AJ223173) Escherichia coli maltose O-acetyl transferase (EC 2.3.1.79) Maa or B0459%2C 182 aa%3B fasta scores: opt: 534 Z-score: 607.5 bits: 119.1 E(): 3.2e-26%3B 43.407%25 identity in 182 aa overlap. Contains 3x Pfam matches to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats) and match to Prosite entry PS00101 Hexapeptide-repeat containing-transferases signature;gbkey=CDS;gene=SCBAC25F8.11c;product=sugar acetyltransferase;protein_id=NP_631564.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8334205	8334291	.	-	.	ID=id9716;Dbxref=GeneID:1102957;Note=PS00101 Hexapeptide-repeat containing-transferases signature;gbkey=misc_feature;gene=SCBAC25F8.11c
NC_003888.3	RefSeq	sequence_feature	8334211	8334264	.	-	.	ID=id9717;Dbxref=GeneID:1102957;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 19.40%2C E-value 0.084;gbkey=misc_feature;gene=SCBAC25F8.11c
NC_003888.3	RefSeq	sequence_feature	8334265	8334318	.	-	.	ID=id9718;Dbxref=GeneID:1102957;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 10.50%2C E-value 36;gbkey=misc_feature;gene=SCBAC25F8.11c
NC_003888.3	RefSeq	sequence_feature	8334373	8334426	.	-	.	ID=id9719;Dbxref=GeneID:1102957;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.30%2C E-value 24;gbkey=misc_feature;gene=SCBAC25F8.11c
NC_003888.3	RefSeq	ribosome_entry_site	8334741	8334744	.	-	.	ID=id9720;gbkey=RBS
NC_003888.3	RefSeq	gene	8334804	8336018	.	-	.	ID=gene7583;Dbxref=GeneID:1102958;Name=SCBAC25F8.12c;gbkey=Gene;gene=SCBAC25F8.12c;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.12c;locus_tag=SCO7520
NC_003888.3	RefSeq	CDS	8334804	8336018	.	-	0	ID=cds7448;Parent=gene7583;Dbxref=Genbank:NP_631565.1,GeneID:1102958;Name=NP_631565.1;Note=SCBAC25F8.12c%2C probable integral membrane protein%2C len: 404 aa%3B similar to SW:MOSC_RHIME (EMBL:L17071) Rhizobium meliloti membrane protein MosC%2C 407 aa%3B fasta scores: opt: 344 Z-score: 351.5 bits: 73.9 E(): 5.7e-12%3B 30.233%25 identity in 387 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SCBAC25F8.12c;product=hypothetical protein;protein_id=NP_631565.1;transl_table=11
NC_003888.3	RefSeq	gene	8336087	8337202	.	-	.	ID=gene7584;Dbxref=GeneID:1102959;Name=SCBAC25F8.13c;gbkey=Gene;gene=SCBAC25F8.13c;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.13c;locus_tag=SCO7521
NC_003888.3	RefSeq	CDS	8336087	8337202	.	-	0	ID=cds7449;Parent=gene7584;Dbxref=Genbank:NP_631566.1,GeneID:1102959;Name=NP_631566.1;Note=SCBAC25F8.13c%2C possible  peptidase%2C len: 371 aa%3B similar to TR:P94288 (EMBL:D86380) Bacillus cereus alkaline D-peptidase%2C Adp%2C 388 aa%3B fasta scores: opt: 430 Z-score: 448.6 bits: 91.7 E(): 2.2e-17%3B 34.663%25 identity in 326 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SCBAC25F8.13c;product=peptidase;protein_id=NP_631566.1;transl_table=11
NC_003888.3	RefSeq	gene	8337389	8339560	.	-	.	ID=gene7585;Dbxref=GeneID:1102960;Name=SCBAC25F8.14c;gbkey=Gene;gene=SCBAC25F8.14c;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.14c;locus_tag=SCO7522
NC_003888.3	RefSeq	CDS	8337389	8339560	.	-	0	ID=cds7450;Parent=gene7585;Dbxref=Genbank:NP_631567.1,GeneID:1102960;Name=NP_631567.1;Note=SCBAC25F8.14c%2C probable DNA ligase%2C len: 723 aa%3B similar to SW:DNLJ_ECOLI (EMBL:M30255) Escherichia coli DNA ligase (EC 6.5.1.2) LigA or Lig or DnaL or PdeC or Lop or B2411%2C 671 aa%3B fasta scores: opt: 1048 Z-score: 1091.0 bits: 212.3 E(): 3.7e-53%3B 38.394%25 identity in 685 aa overlap. Contains Pfam matches to entries PF01653 DNA_ligase_N%2C NAD-dependent DNA ligase and PF00533 BRCT%2C BRCA1 C Terminus (BRCT) domain and match to Prosite entry PS01055 NAD-dependent DNA ligase signature 1;gbkey=CDS;gene=SCBAC25F8.14c;product=DNA ligase;protein_id=NP_631567.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8337419	8337643	.	-	.	ID=id9721;Dbxref=GeneID:1102960;Note=Pfam match to entry PF00533 BRCT%2C BRCA1 C Terminus (BRCT) domain%2C score 45.80%2C E-value 1.1e-12;gbkey=misc_feature;gene=SCBAC25F8.14c
NC_003888.3	RefSeq	sequence_feature	8338499	8339449	.	-	.	ID=id9722;Dbxref=GeneID:1102960;Note=Pfam match to entry PF01653 DNA_ligase_N%2C NAD-dependent DNA ligase%2C score 228.70%2C E-value 8.4e-65;gbkey=misc_feature;gene=SCBAC25F8.14c
NC_003888.3	RefSeq	sequence_feature	8339039	8339128	.	-	.	ID=id9723;Dbxref=GeneID:1102960;Note=PS01055 NAD-dependent DNA ligase signature 1;gbkey=misc_feature;gene=SCBAC25F8.14c
NC_003888.3	RefSeq	ribosome_entry_site	8339595	8339598	.	+	.	ID=id9724;gbkey=RBS
NC_003888.3	RefSeq	gene	8339604	8342117	.	+	.	ID=gene7586;Dbxref=GeneID:1102961;Name=SCBAC25F8.15;gbkey=Gene;gene=SCBAC25F8.15;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.15;locus_tag=SCO7523
NC_003888.3	RefSeq	CDS	8339604	8342117	.	+	0	ID=cds7451;Parent=gene7586;Dbxref=Genbank:NP_631568.1,GeneID:1102961;Name=NP_631568.1;Note=SCBAC25F8.15%2C possible chaperone%2C len: 837 aa%3B highly similar to SW:CLPC_BACSU (EMBL:D26185) Bacillus subtilis negative regulator of genetic competence ClpC or MecB%2C 810 aa%3B fasta scores: opt: 2262 Z-score: 2131.8 bits: 405.4 E(): 3.9e-111%3B 50.807%25 identity in 805 aa overlap and to TR:O69936 (EMBL:AL023861) Streptomyces coelicolor Clp protease ATP binding subunit CplA or SC3C8.27c%2C 842 aa%3B fasta scores: opt: 2590 Z-score: 2440.2 bits: 462.5 E(): 2.6e-128%3B 55.952%25 identity in 840 aa overlap. Contains 2x Pfam matches to entry PF02861 Clp_N%2C Clp amino terminal domain%2C match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA) and matches to Prosite entries 2x PS00017 ATP/GTP-binding site motif A (P-loop%2C)%2C PS00870 Chaperonins clpA/B signature 1 and PS00871 Chaperonins clpA/B signature 2;gbkey=CDS;gene=SCBAC25F8.15;product=chaperone;protein_id=NP_631568.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8339760	8339912	.	+	.	ID=id9725;Dbxref=GeneID:1102961;Note=Pfam match to entry PF02861 Clp_N%2C Clp amino terminal domain%2C score 15.90%2C E-value 0.054;gbkey=misc_feature;gene=SCBAC25F8.15
NC_003888.3	RefSeq	sequence_feature	8339979	8340137	.	+	.	ID=id9726;Dbxref=GeneID:1102961;Note=Pfam match to entry PF02861 Clp_N%2C Clp amino terminal domain%2C score 31.20%2C E-value 2.3e-05;gbkey=misc_feature;gene=SCBAC25F8.15
NC_003888.3	RefSeq	sequence_feature	8340303	8340854	.	+	.	ID=id9727;Dbxref=GeneID:1102961;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 48.90%2C E-value 1.1e-10;gbkey=misc_feature;gene=SCBAC25F8.15
NC_003888.3	RefSeq	sequence_feature	8340318	8340341	.	+	.	ID=id9728;Dbxref=GeneID:1102961;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC25F8.15
NC_003888.3	RefSeq	sequence_feature	8340585	8340623	.	+	.	ID=id9729;Dbxref=GeneID:1102961;Note=PS00870 Chaperonins clpA/B signature 1;gbkey=misc_feature;gene=SCBAC25F8.15
NC_003888.3	RefSeq	sequence_feature	8341320	8341343	.	+	.	ID=id9730;Dbxref=GeneID:1102961;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SCBAC25F8.15
NC_003888.3	RefSeq	sequence_feature	8341398	8341454	.	+	.	ID=id9731;Dbxref=GeneID:1102961;Note=PS00871 Chaperonins clpA/B signature 2;gbkey=misc_feature;gene=SCBAC25F8.15
NC_003888.3	RefSeq	ribosome_entry_site	8342099	8342103	.	+	.	ID=id9732;Dbxref=GeneID:1102961;gbkey=RBS;gene=SCBAC25F8.15
NC_003888.3	RefSeq	gene	8342114	8342632	.	+	.	ID=gene7587;Dbxref=GeneID:1102962;Name=SCBAC25F8.16;gbkey=Gene;gene=SCBAC25F8.16;gene_biotype=protein_coding;gene_synonym=SCBAC25F8.16;locus_tag=SCO7524
NC_003888.3	RefSeq	CDS	8342114	8342632	.	+	0	ID=cds7452;Parent=gene7587;Dbxref=Genbank:NP_631569.1,GeneID:1102962;Name=NP_631569.1;Note=SCBAC25F8.16%2C conserved hypothetical protein%2C len: 172 aa%3B similar to SW:YMEL_STRLN (EMBL:X95703) Streptomyces lincolnensis hypothetical 17.2 kDa protein in melC2-rnhH intergenic region%2C 150 aa%3B fasta scores: opt: 420 Z-score: 503.1 bits: 99.3 E(): 2.1e-20%3B 40.268%25 identity in 149 aa overlap;gbkey=CDS;gene=SCBAC25F8.16;product=hypothetical protein;protein_id=NP_631569.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8342682	8342685	.	+	.	ID=id9733;gbkey=RBS
NC_003888.3	RefSeq	gene	8342696	8344990	.	+	.	ID=gene7588;Dbxref=GeneID:1102963;Name=SC8G12.01;gbkey=Gene;gene=SC8G12.01;gene_biotype=protein_coding;gene_synonym=SC8G12.01,SCBAC25F8.17;locus_tag=SCO7525
NC_003888.3	RefSeq	CDS	8342696	8344990	.	+	0	ID=cds7453;Parent=gene7588;Dbxref=Genbank:NP_733736.1,GeneID:1102963;Name=NP_733736.1;Note=SC8G12.01%2C possible oxidoreductase%2C partial CDS%2C len: >169 aa. Highly similar to several including: Streptomyces coelicolor TR:CAB52060(EMBL:AL109732) formate dehydrogenase%2C SC7H2.18 (759 aa)%2C fasta scores opt:670 z-score: 812.0 E(): 0 62.3%25 identity in 167 aa overlap and Mycobacterium tuberculosis TR:YX31_MYCTU(EMBL:Z74024) hypothetical 84.6 kd protein (779 aa)%2C fasta scores opt: 571 z-score: 692.2 E(): 4.3e-31 55.2%25 identity in 172 aa overlap.~SCBAC25F8.17%2C probable oxidoreductase (fragment)%2C len: >629 aa%3B similar to N-terminal reguion of TR:AAK47294 (EMBL:AE007119) Mycobacterium tuberculosis CDC1551 formate dehydrogenase%2C alpha subunit%2C MT2968%2C 779 aa%3B fasta scores: opt: 2423 Z-score: 2763.1 bits: 521.7 E(): 2.7e-146%3B 56.640%25 identity in 625 aa overlap and of TR:CAB52060 (EMBL:AL109732) Streptomyces coelicolor formate dehydrogenase SC7H2.18%2C 759 aa%3B fasta scores: opt: 2617 Z-score: 2803.0 bits: 529.1 E(): 2.1e-150%3B 62.798%25 identity in 629 aa overlap. Contains 2x Pfam matches to entry PF00384 molybdopterin%2C Molybdopterin oxidoreductases and match to Prosite entry PS00697 ATP-dependent DNA ligase AMP-binding site and PS00402 Binding-protein-dependent transport systems inner membrane comp sign;gbkey=CDS;gene=SC8G12.01;product=oxidoreductase;protein_id=NP_733736.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8343047	8343466	.	+	.	ID=id9734;Dbxref=GeneID:1102963;Note=Pfam match to entry PF00384 molybdopterin%2C Molybdopterin oxidoreductases%2C score 61.80%2C E-value 3.2e-16;gbkey=misc_feature;gene=SC8G12.01
NC_003888.3	RefSeq	sequence_feature	8343425	8343451	.	+	.	ID=id9735;Dbxref=GeneID:1102963;Note=PS00697 ATP-dependent DNA ligase AMP-binding site;gbkey=misc_feature;gene=SC8G12.01
NC_003888.3	RefSeq	sequence_feature	8343533	8343961	.	+	.	ID=id9736;Dbxref=GeneID:1102963;Note=Pfam match to entry PF00384 molybdopterin%2C Molybdopterin oxidoreductases%2C score 60.40%2C E-value 7.7e-16;gbkey=misc_feature;gene=SC8G12.01
NC_003888.3	RefSeq	sequence_feature	8344484	8344570	.	+	.	ID=id9737;Dbxref=GeneID:1102963;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SC8G12.01
NC_003888.3	RefSeq	gene	8345074	8346285	.	+	.	ID=gene7589;Dbxref=GeneID:1102964;Name=cmlR1;gbkey=Gene;gene=cmlR1;gene_biotype=protein_coding;gene_synonym=cmlR1;locus_tag=SCO7526
NC_003888.3	RefSeq	CDS	8345074	8346285	.	+	0	ID=cds7454;Parent=gene7589;Dbxref=Genbank:NP_631570.1,GeneID:1102964;Name=NP_631570.1;Note=SC8G12.02%2C cmlR1%2C chloramphenicol resistance protein%2C len: 392 aa. Highly similar to many including: Streptomyces lividans SW:CMLR_STRLI(EMBL:X59968) chloramphenicol resistance protein%2C CmlR (392 aa)%2C fasta scores opt: 940 z-score: 1039.3 E():0 40.6%25 identity in 397 aa overlap and Streptomyces violaceus TR:Q56147(EMBL:U09991) chloramphenicol resistance protein%2C CmlV (436 aa)%2C fasta scores opt: 2023 z-score: 2227.6 E():0 80.0%25 identity in 404 aa overlap. Also similar to several Streptomyces coelicolor efflux protein e.g. TR:CAB66188(EMBL:AL136500) SC1G2.16C (413 aa)%2C fasta scores opt: 1036 z-score: 1144.4 E():0 41.6%25 identity in 406 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=cmlR1;product=chloramphenicol resistance protein;protein_id=NP_631570.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8345074	8346237	.	+	.	ID=id9738;Dbxref=GeneID:1102964;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -92.60%2C E-value 0.0015;gbkey=misc_feature;gene=cmlR1
NC_003888.3	RefSeq	gene	8346301	8347332	.	-	.	ID=gene7590;Dbxref=GeneID:1102965;Name=SC8G12.03c;gbkey=Gene;gene=SC8G12.03c;gene_biotype=protein_coding;gene_synonym=SC8G12.03c;locus_tag=SCO7527
NC_003888.3	RefSeq	CDS	8346301	8347332	.	-	0	ID=cds7455;Parent=gene7590;Dbxref=Genbank:NP_631571.1,GeneID:1102965;Name=NP_631571.1;Note=SC8G12.03c%2C possible DeoR-family transcriptional regulator%2C len: 343 aa. Similar to several e.g. Streptomyces coelicolor TR:CAB81864 (EMBL:AL161691) DeoR-family transcriptional regulator%2C SCD40A.19C (339 aa)%2C fasta scores opt: 600 z-score: 674.6 E(): 4.1e-30 41.1%25 identity in 316 aa overlap. Contains a Prosite hit to PS00894 Bacterial regulatory proteins%2C deoR family signature with a helix-turn-helix motif situated between residues 31..52 (+2.89 SD).;gbkey=CDS;gene=SC8G12.03c;product=DeoR family transcriptional regulator;protein_id=NP_631571.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8347180	8347284	.	-	.	ID=id9739;Dbxref=GeneID:1102965;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature;gbkey=misc_feature;gene=SC8G12.03c
NC_003888.3	RefSeq	gene	8347357	8347857	.	+	.	ID=gene7591;Dbxref=GeneID:1102966;Name=SC8G12.04;gbkey=Gene;gene=SC8G12.04;gene_biotype=protein_coding;gene_synonym=SC8G12.04;locus_tag=SCO7528
NC_003888.3	RefSeq	CDS	8347357	8347857	.	+	0	ID=cds7456;Parent=gene7591;Dbxref=Genbank:NP_631572.1,GeneID:1102966;Name=NP_631572.1;Note=SC8G12.04%2C unknown%2C len: 166 aa%3B similar to TR:Q9KZG9 (EMBL:AL353864) hypothetical protein SC8F11.09 from Streptomyces coelicolor (137 aa) fasta scores%3B opt: 348%2C Z-score: 421.0%2C E(): 8.2e-16%2C 38.060%25 identity (38.636%25 ungapped) in 134 aa overlap.;gbkey=CDS;gene=SC8G12.04;product=hypothetical protein;protein_id=NP_631572.1;transl_table=11
NC_003888.3	RefSeq	gene	8347854	8348954	.	+	.	ID=gene7592;Dbxref=GeneID:1102967;Name=SC8G12.05;gbkey=Gene;gene=SC8G12.05;gene_biotype=protein_coding;gene_synonym=SC8G12.05;locus_tag=SCO7529
NC_003888.3	RefSeq	CDS	8347854	8348954	.	+	0	ID=cds7457;Parent=gene7592;Dbxref=Genbank:NP_631573.1,GeneID:1102967;Name=NP_631573.1;Note=SC8G12.05%2C unknown%2C len: 366 aa. Similar to a protein of unknown function from Streptomyces coelicolor TR:Q9Z5B0(EMBL:AL035478) SC2G5.13 (368 aa)%2C fasta scores opt: 688 z-score: 727.2 E():0 44.1%25 identity in 365 aa overlap.;gbkey=CDS;gene=SC8G12.05;product=hypothetical protein;protein_id=NP_631573.1;transl_table=11
NC_003888.3	RefSeq	gene	8348997	8350079	.	-	.	ID=gene7593;Dbxref=GeneID:1102968;Name=SC8G12.06c;gbkey=Gene;gene=SC8G12.06c;gene_biotype=protein_coding;gene_synonym=SC8G12.06c;locus_tag=SCO7530
NC_003888.3	RefSeq	CDS	8348997	8350079	.	-	0	ID=cds7458;Parent=gene7593;Dbxref=Genbank:NP_631574.1,GeneID:1102968;Name=NP_631574.1;Note=SC8G12.06c%2C possible regulatory protein%2C len: 360 aa. The N-terminus of this protein is similar to many regulatory proteins e.g. Deinococcus radiodurans TR:AAF11989(EMBL:AE002074) transcriptional regulator%2C MerR family (280 aa)%2C fasta scores opt: 324 z-score: 367.6 E(): 5.1e-13 37.3%25 identity in 244 aa overlap. The C-terminus of this protein is similar to many hypothetical proteins and phosphatases e.g. Mycobacterium leprae TR:Q50188(EMBL:Z70722) phosphoprotein phosphatase (509 aa)%2C fasta scores opt: 709 z-score: 790.9 E(): 0 54.6%25 identity in 238 aa overlap. Contains a Prosite hit to PS00552 Bacterial regulatory proteins%2C merR family signature and a Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family.;gbkey=CDS;gene=SC8G12.06c;product=regulatory protein;protein_id=NP_631574.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8349945	8350055	.	-	.	ID=id9740;Dbxref=GeneID:1102968;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 44.70%2C E-value 2.1e-09;gbkey=misc_feature;gene=SC8G12.06c
NC_003888.3	RefSeq	sequence_feature	8349987	8350055	.	-	.	ID=id9741;Dbxref=GeneID:1102968;Note=PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=misc_feature;gene=SC8G12.06c
NC_003888.3	RefSeq	ribosome_entry_site	8350089	8350094	.	-	.	ID=id9742;gbkey=RBS
NC_003888.3	RefSeq	gene	8350151	8351407	.	-	.	ID=gene7594;Dbxref=GeneID:1102969;Name=SC8G12.07c;gbkey=Gene;gene=SC8G12.07c;gene_biotype=protein_coding;gene_synonym=SC8G12.07c;locus_tag=SCO7531
NC_003888.3	RefSeq	CDS	8350151	8351407	.	-	0	ID=cds7459;Parent=gene7594;Dbxref=Genbank:NP_631575.1,GeneID:1102969;Name=NP_631575.1;Note=SC8G12.07c%2C integral membrane protein%2C len: 418 aa. Similar in parts to many including: Mycobacterium leprae TR:Q9ZBE3(EMBL:AL035300) acyltransferase (696 aa)%2C fasta scores opt: 294 z-score: 328.6 E(): 7.6e-11 39.5%25 identity in 443 aa overlap and Neisseria meningitidis TR:CAB85413(EMBL:AL162758) inner membrane trans-acylase (622 aa)%2C fasta scores opt: 468 z-score: 522.8 E(): 1.2e-21 31.2%25 identity in 359 aa overlap. Contains a Pfam match to entry PF01757 DUF33%2C Domain of unknown function. Also contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8G12.07c;product=acyltransferase;protein_id=NP_631575.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8350340	8351263	.	-	.	ID=id9743;Dbxref=GeneID:1102969;Note=Pfam match to entry PF01757 DUF33%2C Domain of unknown function%2C score -176.80%2C E-value 0.0013;gbkey=misc_feature;gene=SC8G12.07c
NC_003888.3	RefSeq	gene	8351511	8352350	.	-	.	ID=gene7595;Dbxref=GeneID:1102970;Name=SC8G12.08c;gbkey=Gene;gene=SC8G12.08c;gene_biotype=protein_coding;gene_synonym=SC8G12.08c;locus_tag=SCO7532
NC_003888.3	RefSeq	CDS	8351511	8352350	.	-	0	ID=cds7460;Parent=gene7595;Dbxref=Genbank:NP_631576.1,GeneID:1102970;Name=NP_631576.1;Note=SC8G12.08c%2C possible hypothetical protein%2C len: 279 aa. Weakly similar to Streptomyces coelicolor TR:O69870(EMBL:AL023702)  lipoprotein%2C SC1C3.28C (327 aa)%2C fasta scores 70 opt: 137 z-score: 153.5 E(): 0.43 26.0%25 identity in 269 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC8G12.08c;product=hypothetical protein;protein_id=NP_631576.1;transl_table=11
NC_003888.3	RefSeq	gene	8352526	8353227	.	+	.	ID=gene7596;Dbxref=GeneID:1102971;Name=SC8G12.09;gbkey=Gene;gene=SC8G12.09;gene_biotype=protein_coding;gene_synonym=SC8G12.09;locus_tag=SCO7533
NC_003888.3	RefSeq	CDS	8352526	8353227	.	+	0	ID=cds7461;Parent=gene7596;Dbxref=Genbank:NP_631577.1,GeneID:1102971;Name=NP_631577.1;Note=SC8G12.09%2C two-component system response regulator protein%2C len: 233 aa. Highly similar to many response regulators including: Amycolatopsis mediterranei TR:CAB82846(EMBL:AJ277082)  response regulator (229 aa)%2C fasta scores opt: 937 z-score: 1114.4 E(): 0 61.9%25 identity in 231 aa overlap and Streptomyces coelicolor TR:Q9ZEP4(EMBL:AJ131213) response regulator%2C SCE94.09 (234 aa)%2C fasta scores opt: 665 z-score: 793.6 E():0 45.5%25 identity in 231 aa overlap. Contains a Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain and a Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal.;gbkey=CDS;gene=SC8G12.09;product=two-component system response regulator;protein_id=NP_631577.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8352529	8352861	.	+	.	ID=id9744;Dbxref=GeneID:1102971;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 152.60%2C E-value 7.1e-42;gbkey=misc_feature;gene=SC8G12.09
NC_003888.3	RefSeq	sequence_feature	8352988	8353206	.	+	.	ID=id9745;Dbxref=GeneID:1102971;Note=Pfam match to entry PF00486 trans_reg_C%2C Transcriptional regulatory protein%2C C terminal%2C score 98.80%2C E-value 3.1e-28;gbkey=misc_feature;gene=SC8G12.09
NC_003888.3	RefSeq	gene	8353224	8354738	.	+	.	ID=gene7597;Dbxref=GeneID:1102972;Name=SC8G12.10;gbkey=Gene;gene=SC8G12.10;gene_biotype=protein_coding;gene_synonym=SC8G12.10;locus_tag=SCO7534
NC_003888.3	RefSeq	CDS	8353224	8354738	.	+	0	ID=cds7462;Parent=gene7597;Dbxref=Genbank:NP_631578.1,GeneID:1102972;Name=NP_631578.1;Note=SC8G12.10%2C possible two component system histidine kinase%2C len: 504 aa. Highly similar to several e.g. Streptomyces coelicolor SW:AFQ2_STRCO(EMBL:D10654) sensor protein AfsQ2 (EC 2.7.3.-) (535 aa)%2C fasta scores opt: 1060 z-score: 1143.7 E(): 0 41.3%25 identity in 506 aa overlap. Contains Pfam matches to entries PF00672 DUF5%2C Domain found in bacterial signal proteins and PF00512 signal%2C Histidine kinase domain%2C as well as a possible N-terminal hydrophobic membrane spanning region;gbkey=CDS;gene=SC8G12.10;product=two component system histidine kinase;protein_id=NP_631578.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8353818	8354024	.	+	.	ID=id9746;Dbxref=GeneID:1102972;Note=Pfam match to entry PF00672 DUF5%2C Domain found in bacterial signal proteins%2C score 71.70%2C E-value 1.5e-17;gbkey=misc_feature;gene=SC8G12.10
NC_003888.3	RefSeq	sequence_feature	8354085	8354708	.	+	.	ID=id9747;Dbxref=GeneID:1102972;Note=Pfam match to entry PF00512 signal%2C Histidine kinase%2C score 224.70%2C E-value 1.4e-63;gbkey=misc_feature;gene=SC8G12.10
NC_003888.3	RefSeq	gene	8354735	8355298	.	+	.	ID=gene7598;Dbxref=GeneID:1102973;Name=SC8G12.11;gbkey=Gene;gene=SC8G12.11;gene_biotype=protein_coding;gene_synonym=SC8G12.11;locus_tag=SCO7535
NC_003888.3	RefSeq	CDS	8354735	8355298	.	+	0	ID=cds7463;Parent=gene7598;Dbxref=Genbank:NP_631579.1,GeneID:1102973;Name=NP_631579.1;Note=SC8G12.11%2C possible lipoprotein%2C len: 187 aa. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC8G12.11;product=lipoprotein;protein_id=NP_631579.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8354783	8354815	.	+	.	ID=id9748;Dbxref=GeneID:1102973;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC8G12.11
NC_003888.3	RefSeq	gene	8355539	8357758	.	+	.	ID=gene7599;Dbxref=GeneID:1102974;Name=SC8G12.12;gbkey=Gene;gene=SC8G12.12;gene_biotype=protein_coding;gene_synonym=SC8G12.12;locus_tag=SCO7536
NC_003888.3	RefSeq	CDS	8355539	8357758	.	+	0	ID=cds7464;Parent=gene7599;Dbxref=Genbank:NP_631580.1,GeneID:1102974;Name=NP_631580.1;Note=SC8G12.12%2C possible integral membrane protein%2C len: 739 aa. Highly similar to many Streptomyces coelicolor membrane proteins including: TR:CAB59662(EMBL:AL132674) SCE87.17C (745 aa)%2C fasta scores opt: 1860 z-score: 1926.0 E():0 66.5%25 identity in 740 aa overlap and SW:MMLC_STRCO(EMBL:AL031107) SC5A7.16C (705 aa)%2C fasta scores opt: 596 z-score: 618.6 E(): 5.4e-27 38.7%25 identity in 744 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a possible N-terminal signal sequence.;gbkey=CDS;gene=SC8G12.12;product=hypothetical protein;protein_id=NP_631580.1;transl_table=11
NC_003888.3	RefSeq	gene	8357815	8359128	.	-	.	ID=gene7600;Dbxref=GeneID:1102975;Name=SC8G12.13c;gbkey=Gene;gene=SC8G12.13c;gene_biotype=protein_coding;gene_synonym=SC8G12.13c;locus_tag=SCO7537
NC_003888.3	RefSeq	CDS	8357815	8359128	.	-	0	ID=cds7465;Parent=gene7600;Dbxref=Genbank:NP_631581.1,GeneID:1102975;Name=NP_631581.1;Note=SC8G12.13c%2C aminotransferase%2C len: 437 aa. Highly similar to several including the bifunctional aminotransferring decarboxylase: 2%2C2-dialkylglycine decarboxylase (EC 4.1.1.64) from Burkholderia cepacia SW:DGDA_BURCE(EMBL:J05282) (432 aa)%2C fasta scores opt: 1723 z-score: 1953.5 E(): 0 63.7%25 identity in 422 aa overlap and Mycobacterium leprae SW:GABT_MYCLE(EMBL:U00011) 4-aminobutyrate aminotransferase (EC 2.6.1.19) (446 aa)%2C fasta scores opt: 697 z-score: 792.4 E(): 0 34.0%25 identity in 418 aa overlap. Contains a Prosite hit to PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site and a Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate.;gbkey=CDS;gene=SC8G12.13c;product=aminotransferase;protein_id=NP_631581.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8357893	8359032	.	-	.	ID=id9749;Dbxref=GeneID:1102975;Note=Pfam match to entry PF00202 aminotran_3%2C Aminotransferases class-III pyridoxal-phosphate%2C score 449.50%2C E-value 8.5e-156;gbkey=misc_feature;gene=SC8G12.13c
NC_003888.3	RefSeq	sequence_feature	8358298	8358411	.	-	.	ID=id9750;Dbxref=GeneID:1102975;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site;gbkey=misc_feature;gene=SC8G12.13c
NC_003888.3	RefSeq	gene	8359215	8360183	.	+	.	ID=gene7601;Dbxref=GeneID:1102976;Name=SC8G12.14;gbkey=Gene;gene=SC8G12.14;gene_biotype=protein_coding;gene_synonym=SC8G12.14;locus_tag=SCO7538
NC_003888.3	RefSeq	CDS	8359215	8360183	.	+	0	ID=cds7466;Parent=gene7601;Dbxref=Genbank:NP_631582.1,GeneID:1102976;Name=NP_631582.1;Note=SC8G12.14%2C possible LysR-family transcriptional regulator%2C len: 322 aa. Similar to many regulators e.g. Escherichia coli SW:OXYR_ECOLI(EMBL:J04553) hydrogen peroxide-inducible genes activator%2C OxyR (305 aa)%2C fasta scores opt: 323 z-score: 373.2 E(): 2.5e-13 29.4%25 identity in 296 aa overlap and Streptomyces coelicolor TR:CAB71819(EMBL:AL138662) LysR-family transcriptional regulator%2C SC8E4A.14C (300 aa)%2C fasta scores opt: 488 z-score: 563.0 E(): 6.7e-24 34.0%25 identity in 288 aa overlap. Contains a Prosite hit to PS00044 Bacterial regulatory proteins%2C lysR family signature and a Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family with the helix-turn-helix motif situated between residues 24..45 (+4.98 SD).;gbkey=CDS;gene=SC8G12.14;product=LysR family transcriptional regulator;protein_id=NP_631582.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8359287	8359379	.	+	.	ID=id9751;Dbxref=GeneID:1102976;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC8G12.14
NC_003888.3	RefSeq	sequence_feature	8359353	8359673	.	+	.	ID=id9752;Dbxref=GeneID:1102976;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 86.50%2C E-value 5.6e-22;gbkey=misc_feature;gene=SC8G12.14
NC_003888.3	RefSeq	gene	8360197	8360931	.	-	.	ID=gene7602;Dbxref=GeneID:1102977;Name=SC8G12.15c;gbkey=Gene;gene=SC8G12.15c;gene_biotype=protein_coding;gene_synonym=SC8G12.15c;locus_tag=SCO7539
NC_003888.3	RefSeq	CDS	8360197	8360931	.	-	0	ID=cds7467;Parent=gene7602;Dbxref=Genbank:NP_631583.1,GeneID:1102977;Name=NP_631583.1;Note=SC8G12.15c%2C possible TetR-family transcriptional regulator%2C len: 244 aa. Similar to many e.g. Deinococcus radiodurans TR:AAF10298 (EMBL:AE001928) transcriptional regulator%2C TetR family (215 aa)%2C fasta scores opt: 187 z-score: 223.2 E(): 5.6e-05 36.5%25 identity in 104 aa overlap. Also similar to many proteins of undefined function e.g. Mycobacterium tuberculosis SW:Y0DR_MYCTU (EMBL:Z78020) hypothetical 25.4 kd protein (234 aa)%2C fasta scores opt: 372 z-score: 432.3 E(): 1.3e-16 34.1%25 identity in 229 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 42..63 (+5.38 SD).;gbkey=CDS;gene=SC8G12.15c;product=TetR family transcriptional regulator;protein_id=NP_631583.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8360716	8360856	.	-	.	ID=id9753;Dbxref=GeneID:1102977;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 25.10%2C E-value 3.1e-05;gbkey=misc_feature;gene=SC8G12.15c
NC_003888.3	RefSeq	gene	8361080	8361751	.	-	.	ID=gene7603;Dbxref=GeneID:1102978;Name=SC8G12.16c;gbkey=Gene;gene=SC8G12.16c;gene_biotype=protein_coding;gene_synonym=SC8G12.16c;locus_tag=SCO7540
NC_003888.3	RefSeq	CDS	8361080	8361751	.	-	0	ID=cds7468;Parent=gene7603;Dbxref=Genbank:NP_631584.1,GeneID:1102978;Name=NP_631584.1;Note=SC8G12.16c%2C hypothetical protein%2C len: 223 aa. Similar to many proteins of unknown function e.g. Streptomyces coelicolor TR:CAB53137(EMBL:AL109962) conserved hypothetical protein%2C SCJ1.19C (223 aa)%2C fasta scores: opt: 425 z-score: 510.8 E(): 5.4e-21 40.5%25 identity in 220 aa overlap. Contains 2x Pfam matches to entry PF00571 CBS%2C CBS domain;gbkey=CDS;gene=SC8G12.16c;product=hypothetical protein;protein_id=NP_631584.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8361326	8361487	.	-	.	ID=id9754;Dbxref=GeneID:1102978;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 49.90%2C E-value 5.7e-11;gbkey=misc_feature;gene=SC8G12.16c
NC_003888.3	RefSeq	sequence_feature	8361569	8361730	.	-	.	ID=id9755;Dbxref=GeneID:1102978;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 51.30%2C E-value 2.1e-11;gbkey=misc_feature;gene=SC8G12.16c
NC_003888.3	RefSeq	gene	8361751	8363910	.	-	.	ID=gene7604;Dbxref=GeneID:1102979;Name=SC8G12.17c;gbkey=Gene;gene=SC8G12.17c;gene_biotype=protein_coding;gene_synonym=SC8G12.17c;locus_tag=SCO7541
NC_003888.3	RefSeq	CDS	8361751	8363910	.	-	0	ID=cds7469;Parent=gene7604;Dbxref=Genbank:NP_631585.1,GeneID:1102979;Name=NP_631585.1;Note=SC8G12.17c%2C unknown%2C len: 719 aa. Similar to many proteins of undefined function e.g. Streptomyces coelicolor TR:CAB61192(EMBL:AL132973) hypothetical 93.0 kD protein%2C SCF91.34 (884 aa)%2C fasta scores opt: 1158 z-score: 1210.0 E():0 36.1%25 identity in 841 aa overlap. Contains a Pfam match to entry PF00989 PAS%2C PAS domain;gbkey=CDS;gene=SC8G12.17c;product=hypothetical protein;protein_id=NP_631585.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8361762	8361766	.	-	.	ID=id9756;Dbxref=GeneID:1102979;gbkey=RBS;gene=SC8G12.17c
NC_003888.3	RefSeq	sequence_feature	8363209	8363403	.	-	.	ID=id9757;Dbxref=GeneID:1102979;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 20.30%2C E-value 0.00055;gbkey=misc_feature;gene=SC8G12.17c
NC_003888.3	RefSeq	gene	8364041	8365387	.	-	.	ID=gene7605;Dbxref=GeneID:1102980;Name=SC8G12.18c;gbkey=Gene;gene=SC8G12.18c;gene_biotype=protein_coding;gene_synonym=SC8G12.18c;locus_tag=SCO7542
NC_003888.3	RefSeq	CDS	8364041	8365387	.	-	0	ID=cds7470;Parent=gene7605;Dbxref=Genbank:NP_631586.1,GeneID:1102980;Name=NP_631586.1;Note=SC8G12.18c%2C possible hypothetical protein%2C len: 448 aa. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=SC8G12.18c;product=hypothetical protein;protein_id=NP_631586.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8365398	8365403	.	-	.	ID=id9758;gbkey=RBS
NC_003888.3	RefSeq	gene	8365616	8366890	.	+	.	ID=gene7606;Dbxref=GeneID:1102981;Name=SC8G12.19;gbkey=Gene;gene=SC8G12.19;gene_biotype=protein_coding;gene_synonym=SC8G12.19;locus_tag=SCO7543
NC_003888.3	RefSeq	CDS	8365616	8366890	.	+	0	ID=cds7471;Parent=gene7606;Dbxref=Genbank:NP_631587.1,GeneID:1102981;Name=NP_631587.1;Note=SC8G12.19%2C possible Crp-family transcriptional regulator%2C len: 424 aa. Similar to several including: Bacillus subtilis SW:XYLR_BACSU (EMBL:M27248) xylose repressor (384 aa)%2C fasta scores opt: 339 z-score: 347.1 E(): 7.1e-12 23.3%25 identity in 390 aa overlap and Streptomyces coelicolor TR:O50502 (EMBL:AL009199) probable transcriptional repressor protein%2C SC7B7.05 (403 aa)%2C fasta scores opt: 691 z-score: 697.8 E(): 2.1e-31 33.9%25 identity in 387 aa overlap. Contains a Prosite hit to PS01125 ROK family signature and Pfam hits to PF00480 ROK%2C ROK family and PF00325 crp%2C Bacterial regulatory proteins%2C crp family with the helix-turn-helix motif situated between residues 32..53 (+4.61 SD).;gbkey=CDS;gene=SC8G12.19;product=CRP family transcriptional regulator;protein_id=NP_631587.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8365706	8365798	.	+	.	ID=id9759;Dbxref=GeneID:1102981;Note=Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family%2C score 15.80%2C E-value 0.0014;gbkey=misc_feature;gene=SC8G12.19
NC_003888.3	RefSeq	sequence_feature	8366180	8366458	.	+	.	ID=id9760;Dbxref=GeneID:1102981;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 96.80%2C E-value 1.1e-27;gbkey=misc_feature;gene=SC8G12.19
NC_003888.3	RefSeq	sequence_feature	8366294	8366377	.	+	.	ID=id9761;Dbxref=GeneID:1102981;Note=PS01125 ROK family signature;gbkey=misc_feature;gene=SC8G12.19
NC_003888.3	RefSeq	gene	8366985	8367788	.	+	.	ID=gene7607;Dbxref=GeneID:1102982;Name=SC8G12.20;gbkey=Gene;gene=SC8G12.20;gene_biotype=protein_coding;gene_synonym=SC8G12.20;locus_tag=SCO7544
NC_003888.3	RefSeq	CDS	8366985	8367788	.	+	0	ID=cds7472;Parent=gene7607;Dbxref=Genbank:NP_631588.1,GeneID:1102982;Name=NP_631588.1;Note=SC8G12.20%2C possible ABC-transport protein%2C membrane component%2C len: 267 aa. Similar to many other transporters e.g. Escherichia coli SW:TAUC_ECOLI(EMBL:D85613) taurine transport permease%2C TauC (275 aa)%2C fasta scores opt: 547 z-score: 643.1 E(): 2.3e-28 37.5%25 identity in 248 aa overlap. Contains multiple possible membrane spanning hydrophobic domains and a Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component.;gbkey=CDS;gene=SC8G12.20;product=ABC transporter membrane protein;protein_id=NP_631588.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8367453	8367668	.	+	.	ID=id9762;Dbxref=GeneID:1102982;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 44.90%2C E-value 1.8e-09;gbkey=misc_feature;gene=SC8G12.20
NC_003888.3	RefSeq	gene	8367785	8368597	.	+	.	ID=gene7608;Dbxref=GeneID:1102983;Name=SC8G12.21;gbkey=Gene;gene=SC8G12.21;gene_biotype=protein_coding;gene_synonym=SC8G12.21;locus_tag=SCO7545
NC_003888.3	RefSeq	CDS	8367785	8368597	.	+	0	ID=cds7473;Parent=gene7608;Dbxref=Genbank:NP_631589.1,GeneID:1102983;Name=NP_631589.1;Note=SC8G12.21%2C possible ABC-transport protein%2C ATP-binding component%2C len: 270 aa. Similar to multiple ABC-transport proteins e.g. Escherichia coli SW:TAUB_ECOLI(EMBL:D85613) taurine transport ATP-binding protein%2C TauB (255 aa)%2C fasta scores opt: 665 z-score: 772.8 E(): 0 43.4%25 identity in 235 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00005 ABC_tran%2C ABC transporter.;gbkey=CDS;gene=SC8G12.21;product=ABC transporter ATP-binding protein;protein_id=NP_631589.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8367893	8368429	.	+	.	ID=id9763;Dbxref=GeneID:1102983;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 224.10%2C E-value 2e-63;gbkey=misc_feature;gene=SC8G12.21
NC_003888.3	RefSeq	sequence_feature	8367914	8367937	.	+	.	ID=id9764;Dbxref=GeneID:1102983;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC8G12.21
NC_003888.3	RefSeq	gene	8368594	8369616	.	+	.	ID=gene7609;Dbxref=GeneID:1102984;Name=SC8G12.22;gbkey=Gene;gene=SC8G12.22;gene_biotype=protein_coding;gene_synonym=SC8G12.22;locus_tag=SCO7546
NC_003888.3	RefSeq	CDS	8368594	8369616	.	+	0	ID=cds7474;Parent=gene7609;Dbxref=Genbank:NP_631590.1,GeneID:1102984;Name=NP_631590.1;Note=SC8G12.22%2C possible solute-binding lipoprotein%2C len: 340 aa. Similar to several e.g. Escherichia coli SW:TAUA_ECOLI(EMBL:D85613) taurine-binding periplasmic protein precursor%2C TauA (320 aa)%2C fasta scores opt: 235 z-score: 267.4 E(): 1.9e-07 23.3%25 identity in 287 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;gene=SC8G12.22;product=lipoprotein;protein_id=NP_631590.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8368663	8368695	.	+	.	ID=id9765;Dbxref=GeneID:1102984;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC8G12.22
NC_003888.3	RefSeq	gene	8369613	8371214	.	+	.	ID=gene7610;Dbxref=GeneID:1102985;Name=SC5F1.01;gbkey=Gene;gene=SC5F1.01;gene_biotype=protein_coding;gene_synonym=SC5F1.01,SC8G12.23;locus_tag=SCO7547
NC_003888.3	RefSeq	CDS	8369613	8371214	.	+	0	ID=cds7475;Parent=gene7610;Dbxref=Genbank:NP_733737.1,GeneID:1102985;Name=NP_733737.1;Note=SC5F1.01%2C possible sulfatase (fragment)%2C len: >136 aa%3B low similarity to SW:YIDJ_ECOLI (EMBL:L10328) Escherichia coli hypothetical 57.3 kDa protein in EmrD-GlvG intergenic region sulfatase YdjI (EC 3.1.6.-)%2C 497 aa%3B fasta scores: opt: 147 z-score: 185.4 E(): 0.0085%3B 29.6%25 identity in 115 aa overlap~SC8G12.23%2C possible sulphatase%2C partial CDS%2C len: >430 aa. Similar to many Eukaryotic sulphatases e.g. Homo sapiens (Human) SW:IDS_HUMAN(EMBL:M58342) iduronate 2-sulfatase precursor (EC 3.1.6.13) (550 aa)%2C fasta scores opt: 326 z-score: 382.2 E(): 7.9e-14 28.4%25 identity in 423 aa overlap. Also similar to Escherichia coli TR:YIDJ_ECOLI(EMBL:L10328) hypothetical 57.3 kd protein (497 aa)%2C fasta scores opt: 221 z-score:0.0 E(): 0.0 31.23%25 identity in 397 aa overlap. Contains a Prosite hit to PS00523 Sulfatases signature 1 and a Pfam match to entry PF00884 Sulfatase%2C Sulfatase.;gbkey=CDS;gene=SC5F1.01;product=sulfatase;protein_id=NP_733737.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8369730	8370902	.	+	.	ID=id9766;Dbxref=GeneID:1102985;Note=Pfam match to entry PF00884 Sulfatase%2C Sulfatase%2C score 83.90%2C E-value 3.2e-21;gbkey=misc_feature;gene=SC5F1.01
NC_003888.3	RefSeq	sequence_feature	8369868	8369906	.	+	.	ID=id9767;Dbxref=GeneID:1102985;Note=PS00523 Sulfatases signature 1;gbkey=misc_feature;gene=SC5F1.01
NC_003888.3	RefSeq	gene	8371292	8372236	.	+	.	ID=gene7611;Dbxref=GeneID:1102986;Name=SC5F1.02;gbkey=Gene;gene=SC5F1.02;gene_biotype=protein_coding;gene_synonym=SC5F1.02;locus_tag=SCO7548
NC_003888.3	RefSeq	CDS	8371292	8372236	.	+	0	ID=cds7476;Parent=gene7611;Dbxref=Genbank:NP_631591.1,GeneID:1102986;Name=NP_631591.1;Note=SC5F1.02%2C conserved hypothetical protein%2C len: 314 aa%3B similar to TR:P95060 (EMBL:Z84395) Mycobacterium tuberculosis hypothetical 32.7 kDa protein MTCY210.31%2C 299 aa%3B fasta scores: opt: 704 z-score: 772.7 E(): 0%3B 47.2%25 identity in 301 aa overlap;gbkey=CDS;gene=SC5F1.02;product=hypothetical protein;protein_id=NP_631591.1;transl_table=11
NC_003888.3	RefSeq	gene	8372211	8372555	.	-	.	ID=gene7612;Dbxref=GeneID:1102987;Name=SC5F1.03c;gbkey=Gene;gene=SC5F1.03c;gene_biotype=protein_coding;gene_synonym=SC5F1.03c;locus_tag=SCO7549
NC_003888.3	RefSeq	CDS	8372211	8372555	.	-	0	ID=cds7477;Parent=gene7612;Dbxref=Genbank:NP_631592.1,GeneID:1102987;Name=NP_631592.1;Note=SC5F1.03c%2C hypothetical protein%2C len: 114 aa%3B similar to TR:Q9KXH9 (EMBL:AL357591) Streptomyces coelicolor hypothetical 20.1 kDa protein SCC53.32c%2C 187 aa%3B fasta scores: opt: 288 z-score: 334.7 E(): 4.1e-11%3B 46.4%25 identity in 97 aa overlap;gbkey=CDS;gene=SC5F1.03c;product=hypothetical protein;protein_id=NP_631592.1;transl_table=11
NC_003888.3	RefSeq	gene	8372680	8373534	.	-	.	ID=gene7613;Dbxref=GeneID:1102988;Name=SC5F1.04c;gbkey=Gene;gene=SC5F1.04c;gene_biotype=protein_coding;gene_synonym=SC5F1.04c;locus_tag=SCO7550
NC_003888.3	RefSeq	CDS	8372680	8373534	.	-	0	ID=cds7478;Parent=gene7613;Dbxref=Genbank:NP_631593.1,GeneID:1102988;Name=NP_631593.1;Note=SC5F1.04c%2C possible  hydrolase%2C len: 284 aa%3B similar to SW:GLPQ_BACSU (EMBL:Z26522) Bacillus subtilis glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) GlpQ%2C 293 aa%3B fasta scores: opt: 354 z-score: 431.1 E(): 1.7e-16%3B 27.8%25 identity in 284 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F1.04c;product=hydrolase;protein_id=NP_631593.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8373540	8373544	.	-	.	ID=id9768;gbkey=RBS
NC_003888.3	RefSeq	gene	8373704	8373907	.	-	.	ID=gene7614;Dbxref=GeneID:1102989;Name=SC5F1.05c;gbkey=Gene;gene=SC5F1.05c;gene_biotype=protein_coding;gene_synonym=SC5F1.05c;locus_tag=SCO7551
NC_003888.3	RefSeq	CDS	8373704	8373907	.	-	0	ID=cds7479;Parent=gene7614;Dbxref=Genbank:NP_631594.1,GeneID:1102989;Name=NP_631594.1;Note=SC5F1.05c%2C hypothetical protein%2C len: 67 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F1.05c;product=hypothetical protein;protein_id=NP_631594.1;transl_table=11
NC_003888.3	RefSeq	gene	8373973	8374599	.	-	.	ID=gene7615;Dbxref=GeneID:1102990;Name=SC5F1.06c;gbkey=Gene;gene=SC5F1.06c;gene_biotype=protein_coding;gene_synonym=SC5F1.06c;locus_tag=SCO7552
NC_003888.3	RefSeq	CDS	8373973	8374599	.	-	0	ID=cds7480;Parent=gene7615;Dbxref=Genbank:NP_631595.1,GeneID:1102990;Name=NP_631595.1;Note=SC5F1.06c%2C possible tetR-family transcriptional regulator%2C len: 208 aa%3B similar to many Streptomyces coelicolor tetR-family transcriptional regulators%2C e.g. TR:Q9WX19 (EMBL:AL079345)  transcriptional regulator SCE68.13%2C 230 aa%3B fasta scores: opt: 567 z-score: 703.0 E(): 1.3e-31%3B 44.9%25 identity in 205 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Also contains possible helix-turn-helix motif at residues 38..59 (+5.63 SD);gbkey=CDS;gene=SC5F1.06c;product=TetR family transcriptional regulator;protein_id=NP_631595.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8374396	8374533	.	-	.	ID=id9769;Dbxref=GeneID:1102990;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 66.20%2C E-value 6.9e-16;gbkey=misc_feature;gene=SC5F1.06c
NC_003888.3	RefSeq	ribosome_entry_site	8374692	8374695	.	+	.	ID=id9770;gbkey=RBS
NC_003888.3	RefSeq	gene	8374699	8375652	.	+	.	ID=gene7616;Dbxref=GeneID:1102991;Name=SC5F1.07;gbkey=Gene;gene=SC5F1.07;gene_biotype=protein_coding;gene_synonym=SC5F1.07;locus_tag=SCO7553
NC_003888.3	RefSeq	CDS	8374699	8375652	.	+	0	ID=cds7481;Parent=gene7616;Dbxref=Genbank:NP_631596.1,GeneID:1102991;Name=NP_631596.1;Note=SC5F1.07%2C possible oxidoreductase%2C len: 317 aa%3B similar to SW:QOR_MOUSE (EMBL:S70056) Mus musculus quinone oxidoreductase (EC 1.6.5.5) CryZ%2C 331 aa%3B fasta scores: opt: 438 z-score: 441.4 E(): 4.7e-17%3B 32.8%25 identity in 335 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases;gbkey=CDS;gene=SC5F1.07;product=oxidoreductase;protein_id=NP_631596.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8374729	8375649	.	+	.	ID=id9771;Dbxref=GeneID:1102991;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score 183.50%2C E-value 3.5e-51;gbkey=misc_feature;gene=SC5F1.07
NC_003888.3	RefSeq	gene	8375936	8376949	.	-	.	ID=gene7617;Dbxref=GeneID:1102992;Name=SC5F1.08c;gbkey=Gene;gene=SC5F1.08c;gene_biotype=protein_coding;gene_synonym=SC5F1.08c;locus_tag=SCO7554
NC_003888.3	RefSeq	CDS	8375936	8376949	.	-	0	ID=cds7482;Parent=gene7617;Dbxref=Genbank:NP_631597.1,GeneID:1102992;Name=NP_631597.1;Note=SC5F1.08c%2C probable lacI-family transcriptional regulator%2C len: 337 aa%3B similar to TR:Q9X9R3 (EMBL:AJ009798) Streptomyces reticuli CebR protein%2C 350 aa%3B fasta scores: opt: 1152 z-score: 1278.6 E(): 0%3B 54.6%25 identity in 339 aa overlap and to SW:CELR_THEFU (EMBL:AF086819) Thermomonospora fusca transcription regulator CelR%2C 340 aa%3B fasta scores: opt: 1031 z-score: 1145.4 E(): 0%3B 52.1%25 identity in 340 aa overlap. Also similar to TR:CAC10103 (EMBL:AL442165) Streptomyces coelicolor lacI-family transcriptional regulatory protein CebR 2SCC13.02c%2C 351 aa%3B fasta scores: opt: 1082 z-score: 996.3 E(): 0%3B 52.8%25 identity in 339 aa overlap. Contains Pfam matches to entries PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family and PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family. Also contains possible helix-turn-helix motif at residues 7..28 (+4.69 SD);gbkey=CDS;gene=SC5F1.08c;product=LacI family transcriptional regulator;protein_id=NP_631597.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8376026	8376763	.	-	.	ID=id9772;Dbxref=GeneID:1102992;Note=Pfam match to entry PF00532 Peripla_BP_like%2C Periplasmic binding proteins and sugar binding domain of the LacI family.%2C score 102.40%2C E-value 8.8e-27;gbkey=misc_feature;gene=SC5F1.08c
NC_003888.3	RefSeq	sequence_feature	8376854	8376937	.	-	.	ID=id9773;Dbxref=GeneID:1102992;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 35.30%2C E-value 1.8e-08;gbkey=misc_feature;gene=SC5F1.08c
NC_003888.3	RefSeq	ribosome_entry_site	8376953	8376956	.	-	.	ID=id9774;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8377274	8377279	.	+	.	ID=id9775;gbkey=RBS
NC_003888.3	RefSeq	gene	8377286	8378596	.	+	.	ID=gene7618;Dbxref=GeneID:1102993;Name=SC5F1.09;gbkey=Gene;gene=SC5F1.09;gene_biotype=protein_coding;gene_synonym=SC5F1.09;locus_tag=SCO7555
NC_003888.3	RefSeq	CDS	8377286	8378596	.	+	0	ID=cds7483;Parent=gene7618;Dbxref=Genbank:NP_631598.1,GeneID:1102993;Name=NP_631598.1;Note=SC5F1.09%2C possible solute binding lipoprotein%2C len: 436 aa%3B similar to TR:Q9L151 (EMBL:AL158061) Streptomyces coelicolor probable solute binding lipoprotein SC6D11.04c%2C 451 aa%3B fasta scores: opt: 386 z-score: 436.1 E(): 9.3e-17%3B 27.5%25 identity in 459 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SC5F1.09;product=solute binding lipoprotein;protein_id=NP_631598.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8377334	8377366	.	+	.	ID=id9776;Dbxref=GeneID:1102993;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC5F1.09
NC_003888.3	RefSeq	sequence_feature	8377718	8378323	.	+	.	ID=id9777;Dbxref=GeneID:1102993;Note=Pfam match to entry PF01547 SBP_bacterial_1%2C Bacterial extracellular solute-binding protein%2C score 28.70%2C E-value 4.8e-07;gbkey=misc_feature;gene=SC5F1.09
NC_003888.3	RefSeq	gene	8378701	8379696	.	+	.	ID=gene7619;Dbxref=GeneID:1102994;Name=SC5F1.10;gbkey=Gene;gene=SC5F1.10;gene_biotype=protein_coding;gene_synonym=SC5F1.10;locus_tag=SCO7556
NC_003888.3	RefSeq	CDS	8378701	8379696	.	+	0	ID=cds7484;Parent=gene7619;Dbxref=Genbank:NP_631599.1,GeneID:1102994;Name=NP_631599.1;Note=SC5F1.10%2C possible sugar transport permease%2C len: 331 aa%3B similar to TR:Q9X9R6 (EMBL:AJ009797) Streptomyces reticuli CebF protein%2C 305 aa%3B fasta scores: opt: 1258 z-score: 1401.2 E(): 0%3B 57.6%25 identity in 311 aa overlap and to TR:CAC10105 (EMBL:AL442165) Streptomyces coelicolor  cellobiose transport permease 2SCC13.04%2C 337 aa%3B fasta scores: opt: 1343 z-score: 1424.3 E(): 0%3B 56.5%25 identity in 336 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5F1.10;product=sugar transport permease;protein_id=NP_631599.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8379331	8379552	.	+	.	ID=id9778;Dbxref=GeneID:1102994;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 48.30%2C E-value 1.8e-10;gbkey=misc_feature;gene=SC5F1.10
NC_003888.3	RefSeq	sequence_feature	8379334	8379420	.	+	.	ID=id9779;Dbxref=GeneID:1102994;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign;gbkey=misc_feature;gene=SC5F1.10
NC_003888.3	RefSeq	ribosome_entry_site	8379700	8379703	.	+	.	ID=id9780;gbkey=RBS
NC_003888.3	RefSeq	gene	8379709	8380632	.	+	.	ID=gene7620;Dbxref=GeneID:1102995;Name=SC5F1.11;gbkey=Gene;gene=SC5F1.11;gene_biotype=protein_coding;gene_synonym=SC5F1.11;locus_tag=SCO7557
NC_003888.3	RefSeq	CDS	8379709	8380632	.	+	0	ID=cds7485;Parent=gene7620;Dbxref=Genbank:NP_631600.1,GeneID:1102995;Name=NP_631600.1;Note=SC5F1.11%2C possible sugar transport integral membrane protein%2C len: 307 aa%3B similar to TR:Q9X9R5 (EMBL:AJ009797) Streptomyces reticuli CebG protein%2C 275 aa%3B fasta scores: opt: 1165 z-score: 1331.6 E(): 0%3B 62.8%25 identity in 274 aa overlap and to TR:CAC10106 (EMBL:AL442165) Streptomyces coelicolor cellobiose transport permease 2SCC13.05%2C 303 aa%3B fasta scores: opt: 1236 z-score: 1261.9 E(): 0%3B 61.1%25 identity in 296 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5F1.11;product=sugar transport integral membrane protein;protein_id=NP_631600.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8380282	8380503	.	+	.	ID=id9781;Dbxref=GeneID:1102995;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 50.40%2C E-value 3.9e-11;gbkey=misc_feature;gene=SC5F1.11
NC_003888.3	RefSeq	gene	8380679	8382118	.	+	.	ID=gene7621;Dbxref=GeneID:1102996;Name=SC5F1.12;gbkey=Gene;gene=SC5F1.12;gene_biotype=protein_coding;gene_synonym=SC5F1.12;locus_tag=SCO7558
NC_003888.3	RefSeq	CDS	8380679	8382118	.	+	0	ID=cds7486;Parent=gene7621;Dbxref=Genbank:NP_631601.1,GeneID:1102996;Name=NP_631601.1;Note=SC5F1.12%2C probable beta-glucosidase%2C len: 479 aa%3B similar to TR:Q59976 (EMBL:Z29625) Streptomyces sp. beta-glucosidase (EC 3.2.1.21) Bgl3%2C 479 aa%3B fasta scores: opt: 2961 z-score: 3301.3 E(): 0%3B 88.9%25 identity in 479 aa overlap and to TR:CAC10107 (EMBL:AL442165) Streptomyces coelicolor cellobiose hydrolase 2SCC13.06%2C 479 aa%3B fasta scores: opt: 2255 z-score: 2227.1 E(): 0%3B 67.4%25 identity in 470 aa overlap. Contains Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1 and match to Prosite entry PS00653 Glycosyl hydrolases family 1 N-terminal signature and PS00572 Glycosyl hydrolases family 1 active site;gbkey=CDS;gene=SC5F1.12;product=beta-glucosidase;protein_id=NP_631601.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8380718	8382115	.	+	.	ID=id9782;Dbxref=GeneID:1102996;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 708.90%2C E-value 2.4e-209;gbkey=misc_feature;gene=SC5F1.12
NC_003888.3	RefSeq	sequence_feature	8380742	8380786	.	+	.	ID=id9783;Dbxref=GeneID:1102996;Note=PS00653 Glycosyl hydrolases family 1 N-terminal signature;gbkey=misc_feature;gene=SC5F1.12
NC_003888.3	RefSeq	sequence_feature	8381813	8381839	.	+	.	ID=id9784;Dbxref=GeneID:1102996;Note=PS00572 Glycosyl hydrolases family 1 active site;gbkey=misc_feature;gene=SC5F1.12
NC_003888.3	RefSeq	stem_loop	8382171	8382213	.	+	.	ID=id9785;Note=possible stem loop. Score 53: 19/20 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8382232	8383428	.	-	.	ID=gene7622;Dbxref=GeneID:1102997;Name=SC5F1.13c;gbkey=Gene;gene=SC5F1.13c;gene_biotype=protein_coding;gene_synonym=SC5F1.13c;locus_tag=SCO7559
NC_003888.3	RefSeq	CDS	8382232	8383428	.	-	0	ID=cds7487;Parent=gene7622;Dbxref=Genbank:NP_631602.1,GeneID:1102997;Name=NP_631602.1;Note=SC5F1.13c%2C probable  sugar hydrolase%2C len: 398 aa%3B similar to SW:E13B_ARTSP (EMBL:D23668) Arthrobacter sp. glucan endo-1%2C3-beta-glucosidase precursor (EC 3.2.1.39) GlcI%2C 548 aa%3B fasta scores: opt: 1570 z-score: 1670.2 E(): 0%3B 59.7%25 identity in 387 aa overlap and to Streptomyces coelicolor probable  hydrolase SC5F1.30c%2C 397 aa%3B fasta scores: opt: 1795 z-score: 1707.3 E(): 0%3B 66.6%25 identity in 386 aa overlap. Contains possible N-terminal signal peptide sequence;gbkey=CDS;gene=SC5F1.13c;product=sugar hydrolase;protein_id=NP_631602.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8383433	8383439	.	-	.	ID=id9786;gbkey=RBS
NC_003888.3	RefSeq	gene	8383565	8384098	.	-	.	ID=gene7623;Dbxref=GeneID:1102998;Name=SC5F1.14c;gbkey=Gene;gene=SC5F1.14c;gene_biotype=protein_coding;gene_synonym=SC5F1.14c;locus_tag=SCO7560
NC_003888.3	RefSeq	CDS	8383565	8384098	.	-	0	ID=cds7488;Parent=gene7623;Dbxref=Genbank:NP_631603.1,GeneID:1102998;Name=NP_631603.1;Note=SC5F1.14c%2C possible MutT-family protein%2C len: 177 aa%3B similar to TR:AAG06157 (EMBL:AE004704) Pseudomonas aeruginosa hypothetical 14. 9 kDa protein PA2769%2C 136 aa%3B fasta scores: opt: 217 z-score: 263.8 E(): 3.6e-07%3B 39.8%25 identity in 128 aa overlap. Contains Pfam match to entry PF00293 mutT%2C Bacterial mutT protein and match to Prosite entry PS00893 mutT domain signature;gbkey=CDS;gene=SC5F1.14c;product=MutT-family protein;protein_id=NP_631603.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8383667	8384041	.	-	.	ID=id9787;Dbxref=GeneID:1102998;Note=Pfam match to entry PF00293 mutT%2C Bacterial mutT protein%2C score 73.10%2C E-value 5.7e-18;gbkey=misc_feature;gene=SC5F1.14c
NC_003888.3	RefSeq	sequence_feature	8383892	8383951	.	-	.	ID=id9788;Dbxref=GeneID:1102998;Note=PS00893 mutT domain signature;gbkey=misc_feature;gene=SC5F1.14c
NC_003888.3	RefSeq	gene	8384103	8385164	.	-	.	ID=gene7624;Dbxref=GeneID:1102999;Name=SC5F1.15c;gbkey=Gene;gene=SC5F1.15c;gene_biotype=protein_coding;gene_synonym=SC5F1.15c;locus_tag=SCO7561
NC_003888.3	RefSeq	CDS	8384103	8385164	.	-	0	ID=cds7489;Parent=gene7624;Dbxref=Genbank:NP_631604.1,GeneID:1102999;Name=NP_631604.1;Note=SC5F1.15c%2C possible esterase%2C len: 353 aa%3B similar to SW:PBP4_NOCLA (EMBL:Z13972) Nocardia lactamdurans penicillin-binding protein 4 Pbp-4%2C 381 aa%3B fasta scores: opt: 246 z-score: 283.9 E(): 2.8e-08%3B 30.6%25 identity in 301 aa overlap;gbkey=CDS;gene=SC5F1.15c;product=esterase;protein_id=NP_631604.1;transl_table=11
NC_003888.3	RefSeq	gene	8385161	8385997	.	-	.	ID=gene7625;Dbxref=GeneID:1103000;Name=SC5F1.16c;gbkey=Gene;gene=SC5F1.16c;gene_biotype=protein_coding;gene_synonym=SC5F1.16c;locus_tag=SCO7562
NC_003888.3	RefSeq	CDS	8385161	8385997	.	-	0	ID=cds7490;Parent=gene7625;Dbxref=Genbank:NP_631605.1,GeneID:1103000;Name=NP_631605.1;Note=SC5F1.16c%2C probable transcriptional regulator%2C len: 278 aa%3B similar to SW:ICLR_ECOLI (EMBL:M31761) Escherichia coli acetate operon repressor IclR%2C 274 aa%3B fasta scores: opt: 353 z-score: 395.0 E(): 1.8e-14%3B 30.0%25 identity in 243 aa overlap. Contains Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator. Also contains possible helix-turn-helix motif at residues 36..57 (+6.31 SD);gbkey=CDS;gene=SC5F1.16c;product=transcriptional regulator;protein_id=NP_631605.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8385166	8385171	.	-	.	ID=id9789;Dbxref=GeneID:1103000;gbkey=RBS;gene=SC5F1.16c
NC_003888.3	RefSeq	sequence_feature	8385224	8385781	.	-	.	ID=id9790;Dbxref=GeneID:1103000;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 139.40%2C E-value 6.5e-38;gbkey=misc_feature;gene=SC5F1.16c
NC_003888.3	RefSeq	gene	8386079	8387629	.	+	.	ID=gene7626;Dbxref=GeneID:1103001;Name=SC5F1.17;gbkey=Gene;gene=SC5F1.17;gene_biotype=protein_coding;gene_synonym=SC5F1.17;locus_tag=SCO7563
NC_003888.3	RefSeq	CDS	8386079	8387629	.	+	0	ID=cds7491;Parent=gene7626;Dbxref=Genbank:NP_631606.1,GeneID:1103001;Name=NP_631606.1;gbkey=CDS;gene=SC5F1.17;product=ABC transporter solute binding lipoprotein;protein_id=NP_631606.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8386115	8387173	.	+	.	ID=id9791;Dbxref=GeneID:1103001;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 176.20%2C E-value 5.3e-49;gbkey=misc_feature;gene=SC5F1.17
NC_003888.3	RefSeq	sequence_feature	8386139	8386171	.	+	.	ID=id9792;Dbxref=GeneID:1103001;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC5F1.17
NC_003888.3	RefSeq	sequence_feature	8387396	8387566	.	+	.	ID=id9793;Dbxref=GeneID:1103001;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 20.00%2C E-value 8.7e-05;gbkey=misc_feature;gene=SC5F1.17
NC_003888.3	RefSeq	ribosome_entry_site	8387614	8387619	.	+	.	ID=id9794;Dbxref=GeneID:1103001;gbkey=RBS;gene=SC5F1.17
NC_003888.3	RefSeq	gene	8387626	8388618	.	+	.	ID=gene7627;Dbxref=GeneID:1103002;Name=SC5F1.18;gbkey=Gene;gene=SC5F1.18;gene_biotype=protein_coding;gene_synonym=SC5F1.18;locus_tag=SCO7564
NC_003888.3	RefSeq	CDS	8387626	8388618	.	+	0	ID=cds7492;Parent=gene7627;Dbxref=Genbank:NP_631607.1,GeneID:1103002;Name=NP_631607.1;gbkey=CDS;gene=SC5F1.18;product=oligopeptide ABC transporter integral membrane protein;protein_id=NP_631607.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8388280	8388495	.	+	.	ID=id9795;Dbxref=GeneID:1103002;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 36.30%2C E-value 7e-07;gbkey=misc_feature;gene=SC5F1.18
NC_003888.3	RefSeq	sequence_feature	8388283	8388369	.	+	.	ID=id9796;Dbxref=GeneID:1103002;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign;gbkey=misc_feature;gene=SC5F1.18
NC_003888.3	RefSeq	gene	8388624	8389529	.	+	.	ID=gene7628;Dbxref=GeneID:1103003;Name=SC5F1.19;gbkey=Gene;gene=SC5F1.19;gene_biotype=protein_coding;gene_synonym=SC5F1.19;locus_tag=SCO7565
NC_003888.3	RefSeq	CDS	8388624	8389529	.	+	0	ID=cds7493;Parent=gene7628;Dbxref=Genbank:NP_631608.1,GeneID:1103003;Name=NP_631608.1;gbkey=CDS;gene=SC5F1.19;product=oligopeptide ABC transporter integral membrane protein;protein_id=NP_631608.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8388708	8388755	.	+	.	ID=id9797;Dbxref=GeneID:1103003;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=misc_feature;gene=SC5F1.19
NC_003888.3	RefSeq	sequence_feature	8389173	8389403	.	+	.	ID=id9798;Dbxref=GeneID:1103003;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 34.00%2C E-value 3.4e-06;gbkey=misc_feature;gene=SC5F1.19
NC_003888.3	RefSeq	gene	8389526	8390392	.	+	.	ID=gene7629;Dbxref=GeneID:1103004;Name=SC5F1.20;gbkey=Gene;gene=SC5F1.20;gene_biotype=protein_coding;gene_synonym=SC5F1.20;locus_tag=SCO7566
NC_003888.3	RefSeq	CDS	8389526	8390392	.	+	0	ID=cds7494;Parent=gene7629;Dbxref=Genbank:NP_631609.1,GeneID:1103004;Name=NP_631609.1;gbkey=CDS;gene=SC5F1.20;product=oligopeptide ABC transporter ATP-binding protein;protein_id=NP_631609.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8389694	8390290	.	+	.	ID=id9799;Dbxref=GeneID:1103004;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 191.30%2C E-value 1.6e-53;gbkey=misc_feature;gene=SC5F1.20
NC_003888.3	RefSeq	sequence_feature	8389715	8389738	.	+	.	ID=id9800;Dbxref=GeneID:1103004;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5F1.20
NC_003888.3	RefSeq	ribosome_entry_site	8390380	8390384	.	+	.	ID=id9801;Dbxref=GeneID:1103004;gbkey=RBS;gene=SC5F1.20
NC_003888.3	RefSeq	gene	8390389	8391339	.	+	.	ID=gene7630;Dbxref=GeneID:1103005;Name=SC5F1.21;gbkey=Gene;gene=SC5F1.21;gene_biotype=protein_coding;gene_synonym=SC5F1.21;locus_tag=SCO7567
NC_003888.3	RefSeq	CDS	8390389	8391339	.	+	0	ID=cds7495;Parent=gene7630;Dbxref=Genbank:NP_631610.1,GeneID:1103005;Name=NP_631610.1;Note=SC5F1.21%2C probable oligopeptide ABC transporter ATP-binding protein%2C len: 316 aa%3B similar to SW:OPPF_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport ATP-binding protein OppF%2C 308 aa%3B fasta scores: opt: 811 z-score: 836.7 E(): 0%3B 46.9%25 identity in 273 aa overlap. Contains Pfam match to entry PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature;gbkey=CDS;gene=SC5F1.21;product=oligopeptide ABC transporter ATP-binding protein;protein_id=NP_631610.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8390548	8391135	.	+	.	ID=id9802;Dbxref=GeneID:1103005;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 220.80%2C E-value 2e-62;gbkey=misc_feature;gene=SC5F1.21
NC_003888.3	RefSeq	sequence_feature	8390569	8390592	.	+	.	ID=id9803;Dbxref=GeneID:1103005;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC5F1.21
NC_003888.3	RefSeq	sequence_feature	8390905	8390949	.	+	.	ID=id9804;Dbxref=GeneID:1103005;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC5F1.21
NC_003888.3	RefSeq	gene	8391351	8392310	.	-	.	ID=gene7631;Dbxref=GeneID:1103006;Name=SC5F1.22c;gbkey=Gene;gene=SC5F1.22c;gene_biotype=protein_coding;gene_synonym=SC5F1.22c;locus_tag=SCO7568
NC_003888.3	RefSeq	CDS	8391351	8392310	.	-	0	ID=cds7496;Parent=gene7631;Dbxref=Genbank:NP_631611.1,GeneID:1103006;Name=NP_631611.1;Note=SC5F1.22c%2C possible regulatory protein%2C len: 319 aa%3B similar to TR:O50502 (EMBL:AL009199) Streptomyces coelicolor probable transcriptional repressor protein SC7B7.05%2C 403 aa%3B fasta scores: opt: 377 z-score: 404.3 E(): 5.5e-15%3B 29.3%25 identity in 290 aa overlap. Contains Pfam match to entry PF00480 ROK%2C ROK family;gbkey=CDS;gene=SC5F1.22c;product=regulatory protein;protein_id=NP_631611.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8391702	8392076	.	-	.	ID=id9805;Dbxref=GeneID:1103006;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 34.90%2C E-value 2.7e-09;gbkey=misc_feature;gene=SC5F1.22c
NC_003888.3	RefSeq	ribosome_entry_site	8392341	8392345	.	+	.	ID=id9806;gbkey=RBS
NC_003888.3	RefSeq	gene	8392352	8393143	.	+	.	ID=gene7632;Dbxref=GeneID:1103007;Name=SC5F1.23;gbkey=Gene;gene=SC5F1.23;gene_biotype=protein_coding;gene_synonym=SC5F1.23;locus_tag=SCO7569
NC_003888.3	RefSeq	CDS	8392352	8393143	.	+	0	ID=cds7497;Parent=gene7632;Dbxref=Genbank:NP_631612.1,GeneID:1103007;Name=NP_631612.1;Note=SC5F1.23%2C conserved hypothetical protein%2C len: 263 aa%3B similar to TR:P74740 (EMBL:D90917) Synechocystis sp. hypothetical 30.2 kDa protein SLR0596%2C 273 aa%3B fasta scores: opt: 248 z-score: 279.7 E(): 4.7e-08%3B 31.6%25 identity in 266 aa overlap;gbkey=CDS;gene=SC5F1.23;product=hypothetical protein;protein_id=NP_631612.1;transl_table=11
NC_003888.3	RefSeq	gene	8393167	8394294	.	+	.	ID=gene7633;Dbxref=GeneID:1103008;Name=SC5F1.24;gbkey=Gene;gene=SC5F1.24;gene_biotype=protein_coding;gene_synonym=SC5F1.24;locus_tag=SCO7570
NC_003888.3	RefSeq	CDS	8393167	8394294	.	+	0	ID=cds7498;Parent=gene7633;Dbxref=Genbank:NP_631613.1,GeneID:1103008;Name=NP_631613.1;Note=SC5F1.24%2C probable isomerase%2C len: 375 aa%3B similar to SW:GUDH_STRCO (EMBL:AL136503) Streptomyces coelicolor probable glucarate dehydratase (EC 4.2.1.40) GudD or SCC77.09c%2C 431 aa%3B fasta scores: opt: 553 z-score: 623.1 E(): 3.6e-27%3B 37.2%25 identity in 398 aa overlap and to SW:TFDD_ALCEU (EMBL:M35097) Alcaligenes eutrophu chloromuconate cycloisomerase (EC 5.5.1.7) TfdD%2C 370 aa%3B fasta scores: opt: 419 z-score: 474.3 E(): 7e-19%3B 29.1%25 identity in 385 aa overlap. Contains Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC5F1.24;product=isomerase;protein_id=NP_631613.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8393173	8394201	.	+	.	ID=id9807;Dbxref=GeneID:1103008;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family%2C score 127.70%2C E-value 2.1e-34;gbkey=misc_feature;gene=SC5F1.24
NC_003888.3	RefSeq	gene	8394291	8394704	.	+	.	ID=gene7634;Dbxref=GeneID:1103009;Name=SC5F1.25;gbkey=Gene;gene=SC5F1.25;gene_biotype=protein_coding;gene_synonym=SC5F1.25;locus_tag=SCO7571
NC_003888.3	RefSeq	CDS	8394291	8394704	.	+	0	ID=cds7499;Parent=gene7634;Dbxref=Genbank:NP_631614.1,GeneID:1103009;Name=NP_631614.1;Note=SC5F1.25%2C conserved hypothetical protein%2C len: 137 aa%3B similar to SW:Y854_PYRHO (EMBL:AP000003) Pyrococcus horikoshii hypothetical protein PH0854%2C 137 aa%3B fasta scores: opt: 326 z-score: 392.0 E(): 2.7e-14%3B 44.3%25 identity in 122 aa overlap. Contains Pfam match to entry PF01042 UPF0076%2C Domain of unknown function UPF0076;gbkey=CDS;gene=SC5F1.25;product=hypothetical protein;protein_id=NP_631614.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8394324	8394674	.	+	.	ID=id9808;Dbxref=GeneID:1103009;Note=Pfam match to entry PF01042 UPF0076%2C Domain of unknown function UPF0076%2C score 89.20%2C E-value 8.4e-23;gbkey=misc_feature;gene=SC5F1.25
NC_003888.3	RefSeq	ribosome_entry_site	8394783	8394787	.	+	.	ID=id9809;gbkey=RBS
NC_003888.3	RefSeq	gene	8394796	8397792	.	+	.	ID=gene7635;Dbxref=GeneID:1103010;Name=SC5F1.26;gbkey=Gene;gene=SC5F1.26;gene_biotype=protein_coding;gene_synonym=SC5F1.26;locus_tag=SCO7572
NC_003888.3	RefSeq	CDS	8394796	8397792	.	+	0	ID=cds7500;Parent=gene7635;Dbxref=Genbank:NP_631615.1,GeneID:1103010;Name=NP_631615.1;Note=SC5F1.26%2C possible oxidoreductase%2C len: 998 aa%3B similar to TR:Q9KKW5 (EMBL:AE004425) Vibrio cholerae oxidoreductase/iron-sulfur cluster-binding protein VCA0985%2C 959 aa%3B fasta scores: opt: 1999 z-score: 2189.0 E(): 0%3B 35.3%25 identity in 966 aa overlap. Contains Pfam matches to entries PF01565 FAD_binding_4%2C FAD binding domain and PF00037 fer4%2C 4Fe-4S binding domain and matches to Prosite entries PS00422 Granins signature 1 and PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=CDS;gene=SC5F1.26;product=oxidoreductase;protein_id=NP_631615.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8394907	8395653	.	+	.	ID=id9810;Dbxref=GeneID:1103010;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 146.50%2C E-value 4.7e-40;gbkey=misc_feature;gene=SC5F1.26
NC_003888.3	RefSeq	sequence_feature	8395432	8395461	.	+	.	ID=id9811;Dbxref=GeneID:1103010;Note=PS00422 Granins signature 1;gbkey=misc_feature;gene=SC5F1.26
NC_003888.3	RefSeq	sequence_feature	8396491	8396562	.	+	.	ID=id9812;Dbxref=GeneID:1103010;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 13.60%2C E-value 0.021;gbkey=misc_feature;gene=SC5F1.26
NC_003888.3	RefSeq	sequence_feature	8396512	8396547	.	+	.	ID=id9813;Dbxref=GeneID:1103010;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature;gbkey=misc_feature;gene=SC5F1.26
NC_003888.3	RefSeq	gene	8397789	8398133	.	-	.	ID=gene7636;Dbxref=GeneID:1103011;Name=SC5F1.27c;gbkey=Gene;gene=SC5F1.27c;gene_biotype=protein_coding;gene_synonym=SC5F1.27c;locus_tag=SCO7573
NC_003888.3	RefSeq	CDS	8397789	8398133	.	-	0	ID=cds7501;Parent=gene7636;Dbxref=Genbank:NP_631616.1,GeneID:1103011;Name=NP_631616.1;Note=SC5F1.27c%2C probable anti-sigma factor antagonist%2C len: 114 aa%3B similar to SW:RSBV_STRCO (EMBL:AF134889) Streptomyces coelicolor anti-sigma factor B antagonist BldG%2C 113 aa%3B fasta scores: opt: 320 z-score: 436.5 E(): 8.8e-17%3B 49.5%25 identity in 99 aa overlap. Contains Pfam match to entry PF01740 STAS%2C STAS domain;gbkey=CDS;gene=SC5F1.27c;product=anti-sigma factor antagonist;protein_id=NP_631616.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8397804	8398118	.	-	.	ID=id9814;Dbxref=GeneID:1103011;Note=Pfam match to entry PF01740 STAS%2C STAS domain%2C score 75.30%2C E-value 1.2e-18;gbkey=misc_feature;gene=SC5F1.27c
NC_003888.3	RefSeq	ribosome_entry_site	8398325	8398330	.	+	.	ID=id9815;gbkey=RBS
NC_003888.3	RefSeq	gene	8398334	8398483	.	+	.	ID=gene7637;Dbxref=GeneID:1103012;Name=SC5F1.28;gbkey=Gene;gene=SC5F1.28;gene_biotype=protein_coding;gene_synonym=SC5F1.28;locus_tag=SCO7574
NC_003888.3	RefSeq	CDS	8398334	8398483	.	+	0	ID=cds7502;Parent=gene7637;Dbxref=Genbank:NP_631617.1,GeneID:1103012;Name=NP_631617.1;Note=SC5F1.28%2C membrane protein%2C len: 49 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC5F1.28;product=hypothetical protein;protein_id=NP_631617.1;transl_table=11
NC_003888.3	RefSeq	gene	8398566	8399423	.	-	.	ID=gene7638;Dbxref=GeneID:1103013;Name=SC5F1.29c;gbkey=Gene;gene=SC5F1.29c;gene_biotype=protein_coding;gene_synonym=SC5F1.29c;locus_tag=SCO7575
NC_003888.3	RefSeq	CDS	8398566	8399423	.	-	0	ID=cds7503;Parent=gene7638;Dbxref=Genbank:NP_631618.1,GeneID:1103013;Name=NP_631618.1;Note=SC5F1.29c%2C probable  hydrolase%2C len: 285 aa%3B similar to SW:GUB_RHOMR (EMBL:U04836) Rhodothermus marinus beta-glucanase precursor (EC 3.2.1.73) BglA%2C 286 aa%3B fasta scores: opt: 626 z-score: 709.7 E(): 5.3e-32%3B 40.5%25 identity in 296 aa overlap and to N-terminal region of TR:CAC14352 (EMBL:AL445945) Streptomyces coelicolor  hydrolase 3SCF60.19%2C 422 aa%3B fasta scores: opt: 1508 z-score: 1618.5 E(): 0%3B 75.9%25 identity in 299 aa overlap. Contains Pfam match to entry PF00722 Glyco_hydro_16%2C Glycosyl hydrolases family 16 and match to Prosite entry PS01034 Glycosyl hydrolases family 16 active sites. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F1.29c;product=hydrolase;protein_id=NP_631618.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8398587	8399387	.	-	.	ID=id9816;Dbxref=GeneID:1103013;Note=Pfam match to entry PF00722 Glyco_hydro_16%2C Glycosyl hydrolases family 16%2C score -20.90%2C E-value 2.1e-06;gbkey=misc_feature;gene=SC5F1.29c
NC_003888.3	RefSeq	sequence_feature	8398905	8398940	.	-	.	ID=id9817;Dbxref=GeneID:1103013;Note=PS01034 Glycosyl hydrolases family 16 active sites;gbkey=misc_feature;gene=SC5F1.29c
NC_003888.3	RefSeq	ribosome_entry_site	8399428	8399431	.	-	.	ID=id9818;gbkey=RBS
NC_003888.3	RefSeq	gene	8399524	8400717	.	-	.	ID=gene7639;Dbxref=GeneID:1103014;Name=SC5F1.30c;gbkey=Gene;gene=SC5F1.30c;gene_biotype=protein_coding;gene_synonym=SC5F1.30c;locus_tag=SCO7576
NC_003888.3	RefSeq	CDS	8399524	8400717	.	-	0	ID=cds7504;Parent=gene7639;Dbxref=Genbank:NP_631619.1,GeneID:1103014;Name=NP_631619.1;Note=SC5F1.30c%2C probable  hydrolase%2C len: 397 aa%3B highly similar to TR:Q9Z4I2 (EMBL:AB019428) Streptomyces matensis laminaripentaose-producing beta-1%2C3-guluase (LPHase) precursor LPH%2C 401 aa%3B fasta scores: opt: 1827 z-score: 1870.8 E(): 0%3B 65.0%25 identity in 394 aa overlap and to Streptomyces coelicolor SC5F1.13c%2C 398 aa%3B fasta scores: opt: 1795 z-score: 1665.4 E(): 0%3B 66.6%25 identity in 386 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F1.30c;product=hydrolase;protein_id=NP_631619.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8400723	8400729	.	-	.	ID=id9819;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8400963	8400967	.	+	.	ID=id9820;gbkey=RBS
NC_003888.3	RefSeq	gene	8400971	8402080	.	+	.	ID=gene7640;Dbxref=GeneID:1103015;Name=SC5F1.31;gbkey=Gene;gene=SC5F1.31;gene_biotype=protein_coding;gene_synonym=SC5F1.31;locus_tag=SCO7577
NC_003888.3	RefSeq	CDS	8400971	8402080	.	+	0	ID=cds7505;Parent=gene7640;Dbxref=Genbank:NP_631620.1,GeneID:1103015;Name=NP_631620.1;Note=SC5F1.31%2C possible  hydrolase%2C len: 369 aa%3B similar to TR:P82594 (EMBL:AB023626) Streptomyces chartreusis alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)%2C 328 aa%3B fasta scores: opt: 336 z-score: 382.3 E(): 9.2e-14%3B 27.8%25 identity in 302 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F1.31;product=hydrolase;protein_id=NP_631620.1;transl_table=11
NC_003888.3	RefSeq	gene	8402124	8402741	.	-	.	ID=gene7641;Dbxref=GeneID:1103016;Name=SC5F1.32c;gbkey=Gene;gene=SC5F1.32c;gene_biotype=protein_coding;gene_synonym=SC5F1.32c;locus_tag=SCO7578
NC_003888.3	RefSeq	CDS	8402124	8402741	.	-	0	ID=cds7506;Parent=gene7641;Dbxref=Genbank:NP_631621.1,GeneID:1103016;Name=NP_631621.1;Note=SC5F1.32c%2C unknown%2C len: 205 aa;gbkey=CDS;gene=SC5F1.32c;product=hypothetical protein;protein_id=NP_631621.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8402427	8402579	.	-	.	ID=id9821;Dbxref=GeneID:1103016;Note=High content in alanine%2C arginine and proline amino acid residues. Also high G+C (83%25);gbkey=misc_feature;gene=SC5F1.32c
NC_003888.3	RefSeq	ribosome_entry_site	8402864	8402867	.	+	.	ID=id9822;gbkey=RBS
NC_003888.3	RefSeq	gene	8402873	8403748	.	+	.	ID=gene7642;Dbxref=GeneID:1103017;Name=SC5F1.33;gbkey=Gene;gene=SC5F1.33;gene_biotype=protein_coding;gene_synonym=SC5F1.33;locus_tag=SCO7579
NC_003888.3	RefSeq	CDS	8402873	8403748	.	+	0	ID=cds7507;Parent=gene7642;Dbxref=Genbank:NP_631622.1,GeneID:1103017;Name=NP_631622.1;Note=SC5F1.33%2C possible DNA-binding protein%2C len: 291 aa%3B similar to TR:Q9KZY5 (EMBL:AL353815) Streptomyces coelicolor  DNA-binding protein SCD6.19%2C 295 aa%3B fasta scores: opt: 643 z-score: 787.2 E(): 0%3B 37.0%25 identity in 281 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix. Also contains possible helix-turn-helix motif at residues 31..52 (+6.28 SD);gbkey=CDS;gene=SC5F1.33;product=DNA-binding protein;protein_id=NP_631622.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8402936	8403103	.	+	.	ID=id9823;Dbxref=GeneID:1103017;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 30.80%2C E-value 3.2e-05;gbkey=misc_feature;gene=SC5F1.33
NC_003888.3	RefSeq	gene	8403793	8404608	.	+	.	ID=gene7643;Dbxref=GeneID:1103018;Name=SC5F1.34;gbkey=Gene;gene=SC5F1.34;gene_biotype=protein_coding;gene_synonym=SC5F1.34;locus_tag=SCO7580
NC_003888.3	RefSeq	CDS	8403793	8404608	.	+	0	ID=cds7508;Parent=gene7643;Dbxref=Genbank:NP_631623.1,GeneID:1103018;Name=NP_631623.1;Note=SC5F1.34%2C hypothetical protein%2C len: 271 aa%3B similar to many Streptomyces coelicolor hypothetical proteins%2C e.g. TR:Q9WX26 (EMBL:AL079345) hypothetical 33.1 kDa protein SCE68.05c%2C 300 aa%3B fasta scores: opt: 794 z-score: 946.3 E(): 0%3B 51.6%25 identity in 248 aa overlap;gbkey=CDS;gene=SC5F1.34;product=hypothetical protein;protein_id=NP_631623.1;transl_table=11
NC_003888.3	RefSeq	gene	8404672	8406342	.	-	.	ID=gene7644;Dbxref=GeneID:1103019;Name=SC5F1.35c;gbkey=Gene;gene=SC5F1.35c;gene_biotype=protein_coding;gene_synonym=SC5F1.35c;locus_tag=SCO7581
NC_003888.3	RefSeq	CDS	8404672	8406342	.	-	0	ID=cds7509;Parent=gene7644;Dbxref=Genbank:NP_631624.1,GeneID:1103019;Name=NP_631624.1;Note=SC5F1.35c%2C hypothetical protein%2C len: 556 aa%3B low similarity to SW:Y811_METJA (EMBL:U67525) Methanococcus jannaschii hypothetical protein MJ0811%2C 439 aa%3B fasta scores: opt: 321 z-score: 347.7 E(): 7.7e-12 26.8%25 identity in 287 aa overlap;gbkey=CDS;gene=SC5F1.35c;product=hypothetical protein;protein_id=NP_631624.1;transl_table=11
NC_003888.3	RefSeq	gene	8406363	8407580	.	-	.	ID=gene7645;Dbxref=GeneID:1103020;Name=SC5F1.36c;gbkey=Gene;gene=SC5F1.36c;gene_biotype=protein_coding;gene_synonym=SC5F1.36c;locus_tag=SCO7582
NC_003888.3	RefSeq	CDS	8406363	8407580	.	-	0	ID=cds7510;Parent=gene7645;Dbxref=Genbank:NP_631625.1,GeneID:1103020;Name=NP_631625.1;Note=SC5F1.36c%2C hypothetical protein%2C len: 405 aa%3B low similarity to SW:Y812_METJA (EMBL:U67525) Methanococcus jannaschii hypothetical protein MJ0812%2C 373 aa%3B fasta scores: opt: 567 z-score: 644.6 E(): 2.2e-28%3B 33.1%25 identity in 311 aa overlap;gbkey=CDS;gene=SC5F1.36c;product=hypothetical protein;protein_id=NP_631625.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8407589	8407595	.	-	.	ID=id9824;gbkey=RBS
NC_003888.3	RefSeq	gene	8407690	8409591	.	+	.	ID=gene7646;Dbxref=GeneID:1103021;Name=SC5F1.37;gbkey=Gene;gene=SC5F1.37;gene_biotype=protein_coding;gene_synonym=SC5F1.37;locus_tag=SCO7583
NC_003888.3	RefSeq	CDS	8407690	8409591	.	+	0	ID=cds7511;Parent=gene7646;Dbxref=Genbank:NP_631626.1,GeneID:1103021;Name=NP_631626.1;Note=SC5F1.37%2C possible  hydrolase%2C len: 633 aa%3B similar to SW:GUN1_STRRE (EMBL:X65616) Streptomyces reticuli cellulase 1 precursor (EC 3.2.1.4) Cel1%2C 746 aa%3B fasta scores: opt: 270 z-score: 294.7 E(): 7e-09%3B 26.0%25 identity in 623 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC5F1.37;product=hydrolase;protein_id=NP_631626.1;transl_table=11
NC_003888.3	RefSeq	gene	8409626	8410198	.	-	.	ID=gene7647;Dbxref=GeneID:1103022;Name=SC5F1.38c;gbkey=Gene;gene=SC5F1.38c;gene_biotype=protein_coding;gene_synonym=SC5F1.38c;locus_tag=SCO7584
NC_003888.3	RefSeq	CDS	8409626	8410198	.	-	0	ID=cds7512;Parent=gene7647;Dbxref=Genbank:NP_631627.1,GeneID:1103022;Name=NP_631627.1;Note=SC5F1.38c%2C probable transcriptional regulator%2C len: 190 aa%3B low similarity to SW:TER4_ECOLI (EMBL:X01083) Escherichia coli tetracycline repressor protein class D TetR%2C 217 aa%3B fasta scores: opt: 131 z-score: 169.5 E(): 0.066%3B 33.0%25 identity in 100 aa overlap. Contains possible helix-turn-helix motif at residues 27..48 (+4.31 SD);gbkey=CDS;gene=SC5F1.38c;product=transcriptional regulator;protein_id=NP_631627.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8410205	8410209	.	-	.	ID=id9825;gbkey=RBS
NC_003888.3	RefSeq	gene	8410259	8410657	.	-	.	ID=gene7648;Dbxref=GeneID:1103023;Name=SC5F1.39c;gbkey=Gene;gene=SC5F1.39c;gene_biotype=protein_coding;gene_synonym=SC5F1.39c;locus_tag=SCO7585
NC_003888.3	RefSeq	CDS	8410259	8410657	.	-	0	ID=cds7513;Parent=gene7648;Dbxref=Genbank:NP_631628.1,GeneID:1103023;Name=NP_631628.1;Note=SC5F1.39c%2C probable merR-family transcriptional regulator%2C len: 132 aa%3B similar to SW:SOXR_PSEAE (EMBL:X95517) Pseudomonas aeruginosa SoxR protein%2C 156 aa%3B fasta scores: opt: 205 z-score: 264.7 E(): 3.3e-07%3B 36.8%25 identity in 117 aa overlap. Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and match to Prosite entry PS00552 Bacterial regulatory proteins%2C merR family signature and possible helix-turn-helix at residues 12..33 (+4.37 SD);gbkey=CDS;gene=SC5F1.39c;product=MerR family transcriptional regulator;protein_id=NP_631628.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8410511	8410615	.	-	.	ID=id9826;Dbxref=GeneID:1103023;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 52.70%2C E-value 8.1e-12;gbkey=misc_feature;gene=SC5F1.39c
NC_003888.3	RefSeq	sequence_feature	8410547	8410615	.	-	.	ID=id9827;Dbxref=GeneID:1103023;Note=PS00552 Bacterial regulatory proteins%2C merR family signature;gbkey=misc_feature;gene=SC5F1.39c
NC_003888.3	RefSeq	ribosome_entry_site	8410663	8410666	.	-	.	ID=id9828;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8410728	8410733	.	+	.	ID=id9829;gbkey=RBS
NC_003888.3	RefSeq	gene	8410741	8411814	.	+	.	ID=gene7649;Dbxref=GeneID:1103024;Name=SC5F1.40;gbkey=Gene;gene=SC5F1.40;gene_biotype=protein_coding;gene_synonym=SC5F1.40;locus_tag=SCO7586
NC_003888.3	RefSeq	CDS	8410741	8411814	.	+	0	ID=cds7514;Parent=gene7649;Dbxref=Genbank:NP_631629.1,GeneID:1103024;Name=NP_631629.1;Note=SC5F1.40%2C probable oxidoreductase%2C len: 357 aa%3B similar to SW:NEMA_ECOLI (EMBL:D86931) Escherichia coli N-ethylmaleimide reductase (EC 1.-.-.-) NemA%2C 365 aa%3B fasta scores: opt: 830 z-score: 878.8 E(): 0%3B 40.5%25 identity in 365 aa overlap. Contains Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family;gbkey=CDS;gene=SC5F1.40;product=oxidoreductase;protein_id=NP_631629.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8410747	8411736	.	+	.	ID=id9830;Dbxref=GeneID:1103024;Note=Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family%2C score 251.80%2C E-value 9.3e-72;gbkey=misc_feature;gene=SC5F1.40
NC_003888.3	RefSeq	gene	8411919	8413286	.	+	.	ID=gene7650;Dbxref=GeneID:1103025;Name=SC5F1.41;gbkey=Gene;gene=SC5F1.41;gene_biotype=protein_coding;gene_synonym=SC5F1.41;locus_tag=SCO7587
NC_003888.3	RefSeq	CDS	8411919	8413286	.	+	0	ID=cds7515;Parent=gene7650;Dbxref=Genbank:NP_631630.1,GeneID:1103025;Name=NP_631630.1;Note=SC5F1.41%2C possible integral membrane protein%2C len: 455 aa%3B similar to TR:Q9L0X9 (EMBL:AL159178) Streptomyces coelicolor  membrane protein SCH22A.03c%2C 429 aa%3B fasta scores: opt: 1974 z-score: 2163.7 E(): 0%3B 69.7%25 identity in 423 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5F1.41;product=hypothetical protein;protein_id=NP_631630.1;transl_table=11
NC_003888.3	RefSeq	gene	8413357	8414277	.	-	.	ID=gene7651;Dbxref=GeneID:1103026;Name=SC5F1.42c;gbkey=Gene;gene=SC5F1.42c;gene_biotype=protein_coding;gene_synonym=SC5F1.42c;locus_tag=SCO7588
NC_003888.3	RefSeq	CDS	8413357	8414277	.	-	0	ID=cds7516;Parent=gene7651;Dbxref=Genbank:NP_631631.1,GeneID:1103026;Name=NP_631631.1;Note=SC5F1.42c%2C possible oxidoreductase%2C len: 306 aa%3B similar to various Streptomyces coelicolor oxidoreductases/dehydrogenases%2C e.g. TR:Q9RIU1 (EMBL:AL133278) dehydratase SCM11.21c%2C 319 aa%3B fasta scores: opt: 912 z-score: 984.0 E(): 0%3B 47.4%25 identity in 312 aa overlap;gbkey=CDS;gene=SC5F1.42c;product=oxidoreductase;protein_id=NP_631631.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8414284	8414288	.	-	.	ID=id9831;gbkey=RBS
NC_003888.3	RefSeq	gene	8414425	8415273	.	-	.	ID=gene7652;Dbxref=GeneID:1103027;Name=SC5F1.43c;gbkey=Gene;gene=SC5F1.43c;gene_biotype=protein_coding;gene_synonym=SC5F1.43c,SC7H9.01c;locus_tag=SCO7589
NC_003888.3	RefSeq	CDS	8414425	8415273	.	-	0	ID=cds7517;Parent=gene7652;Dbxref=Genbank:NP_733738.1,GeneID:1103027;Name=NP_733738.1;Note=SC7H9.01c%2C unknown (fragment)%2C len: >158~SC5F1.43c%2C unknown (fragment)%2C len: >161 aa;gbkey=CDS;gene=SC5F1.43c;product=hypothetical protein;protein_id=NP_733738.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	8415381	8415416	.	-	.	ID=id9832;Note=possible stem loop. Score 51: 17/17 (100%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	gene	8415439	8416959	.	-	.	ID=gene7653;Dbxref=GeneID:1103028;Name=katA2;gbkey=Gene;gene=katA2;gene_biotype=protein_coding;gene_synonym=katA2,SC7H9.02c;locus_tag=SCO7590
NC_003888.3	RefSeq	CDS	8415439	8416959	.	-	0	ID=cds7518;Parent=gene7653;Dbxref=Genbank:NP_631632.1,GeneID:1103028;Name=NP_631632.1;Note=SC7H9.02c%2C katA2%2C catalase%2C len: 487 aa%3B similar to SW:CATA_MICLU (PIR:S27264) Micrococcus luteus catalase (EC 1.11.1.6) KatA%2C 497 aa%3B fasta scores: opt: 1791 z-score: 2040.9 E(): 0%3B 54.8%25 identity in 484 aa overlap and to SW:CATA_STRCO (EMBL:AL035478) Streptomyces coelicolor catalase KatA or SC2G5.25c%2C 487 aa%3B fasta scores: opt: 1699 z-score: 1936.3 E(): 0%3B 53.8%25 identity in 483 aa overlap. Contains Pfam match to entry PF00199 catalase%2C Catalase and matches to Prosite entries PS00438 Catalase proximal active site signature and PS00437 Catalase proximal heme-ligand signature;gbkey=CDS;gene=katA2;product=catalase;protein_id=NP_631632.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8415517	8416935	.	-	.	ID=id9833;Dbxref=GeneID:1103028;Note=Pfam match to entry PF00199 catalase%2C Catalase%2C score 925.90%2C E-value 1.1e-274;gbkey=misc_feature;gene=katA2
NC_003888.3	RefSeq	sequence_feature	8415934	8415960	.	-	.	ID=id9834;Dbxref=GeneID:1103028;Note=PS00437 Catalase proximal heme-ligand signature;gbkey=misc_feature;gene=katA2
NC_003888.3	RefSeq	sequence_feature	8416777	8416827	.	-	.	ID=id9835;Dbxref=GeneID:1103028;Note=PS00438 Catalase proximal active site signature;gbkey=misc_feature;gene=katA2
NC_003888.3	RefSeq	sequence_feature	8417015	8417430	.	+	.	ID=id9836;Note=High G+C content region (80.52%25);gbkey=misc_feature
NC_003888.3	RefSeq	gene	8417434	8418396	.	-	.	ID=gene7654;Dbxref=GeneID:1103029;Name=SC7H9.03c;gbkey=Gene;gene=SC7H9.03c;gene_biotype=protein_coding;gene_synonym=SC7H9.03c;locus_tag=SCO7591
NC_003888.3	RefSeq	CDS	8417434	8418396	.	-	0	ID=cds7519;Parent=gene7654;Dbxref=Genbank:NP_631633.1,GeneID:1103029;Name=NP_631633.1;Note=SC7H9.03c%2C probable regulatory protein%2C len: 320 aa%3B similar to SW:NAHR_PSEPU (EMBL:J04233) Pseudomonas putida transcriptional activator protein NahR%2C 300 aa%3B fasta scores: opt: 452 z-score: 510.2 E(): 7e-21%3B 32.4%25 identity in 296 aa overlap. Contains Pfam matches to entries PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and PF01046 NodD_C_term%2C NodD transcription activator carboxyl terminal region and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=CDS;gene=SC7H9.03c;product=regulatory protein;protein_id=NP_631633.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8417647	8417877	.	-	.	ID=id9837;Dbxref=GeneID:1103029;Note=Pfam match to entry PF01046 NodD_C_term%2C NodD transcription activator carboxyl terminal region%2C score 37.90%2C E-value 3.9e-10;gbkey=misc_feature;gene=SC7H9.03c
NC_003888.3	RefSeq	sequence_feature	8417932	8418360	.	-	.	ID=id9838;Dbxref=GeneID:1103029;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 61.20%2C E-value 1.7e-14;gbkey=misc_feature;gene=SC7H9.03c
NC_003888.3	RefSeq	sequence_feature	8418226	8418318	.	-	.	ID=id9839;Dbxref=GeneID:1103029;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC7H9.03c
NC_003888.3	RefSeq	ribosome_entry_site	8418500	8418504	.	+	.	ID=id9840;gbkey=RBS
NC_003888.3	RefSeq	gene	8418509	8419402	.	+	.	ID=gene7655;Dbxref=GeneID:1103030;Name=SC7H9.04;gbkey=Gene;gene=SC7H9.04;gene_biotype=protein_coding;gene_synonym=SC7H9.04;locus_tag=SCO7592
NC_003888.3	RefSeq	CDS	8418509	8419402	.	+	0	ID=cds7520;Parent=gene7655;Dbxref=Genbank:NP_631634.1,GeneID:1103030;Name=NP_631634.1;Note=SC7H9.04%2C hypothetical protein%2C len: 297 aa%3B similar to TR:Q9RCY4 (EMBL:AL133469) Streptomyces coelicolor hypothetical 31.4 kDa protein SCM10.14c%2C 299 aa%3B fasta scores: opt: 791 z-score: 890.7 E(): 0%3B 46.4%25 identity in 302 aa overlap;gbkey=CDS;gene=SC7H9.04;product=hypothetical protein;protein_id=NP_631634.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8419477	8419480	.	+	.	ID=id9841;gbkey=RBS
NC_003888.3	RefSeq	gene	8419486	8419851	.	+	.	ID=gene7656;Dbxref=GeneID:1103031;Name=SC7H9.05;gbkey=Gene;gene=SC7H9.05;gene_biotype=protein_coding;gene_synonym=SC7H9.05;locus_tag=SCO7593
NC_003888.3	RefSeq	CDS	8419486	8419851	.	+	0	ID=cds7521;Parent=gene7656;Dbxref=Genbank:NP_631635.1,GeneID:1103031;Name=NP_631635.1;Note=SC7H9.05%2C unknown%2C len: 121 aa;gbkey=CDS;gene=SC7H9.05;product=hypothetical protein;protein_id=NP_631635.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8420005	8420008	.	+	.	ID=id9842;gbkey=RBS
NC_003888.3	RefSeq	gene	8420016	8421062	.	+	.	ID=gene7657;Dbxref=GeneID:1103032;Name=SC7H9.06;gbkey=Gene;gene=SC7H9.06;gene_biotype=protein_coding;gene_synonym=SC7H9.06;locus_tag=SCO7594
NC_003888.3	RefSeq	CDS	8420016	8421062	.	+	0	ID=cds7522;Parent=gene7657;Dbxref=Genbank:NP_631636.1,GeneID:1103032;Name=NP_631636.1;Note=SC7H9.06%2C possible oxidoreductase%2C len: 348 aa%3B highly similar to TR:Q46851 (EMBL:U28377) Escherichia coli reductase ORF_0346%2C 346 aa%3B fasta scores: opt: 1411 z-score: 1623.6 E(): 0%3B 61.9%25 identity in 344 aa overlap%2C to TR:Q39151 (EMBL:L40948) Arabidopsis thaliana K+ channel protein beta subunit%2C 328 aa%3B fasta scores: opt: 639 z-score: 738.9 E(): 0%3B 38.9%25 identity in 306 aa overlap and to TR:CAB42946 (EMBL:AL049863) Streptomyces coelicolor ion channel subunit SC5H1.21%2C 319 aa%3B fasta scores: opt: 1347 z-score: 1354.1 E(): 0%3B 64.9%25 identity in 322 aa overlap. Contains 2x Pfam matches to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family;gbkey=CDS;gene=SC7H9.06;product=oxidoreductase;protein_id=NP_631636.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8420367	8420531	.	+	.	ID=id9843;Dbxref=GeneID:1103032;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 13.90%2C E-value 0.0058;gbkey=misc_feature;gene=SC7H9.06
NC_003888.3	RefSeq	sequence_feature	8420817	8420882	.	+	.	ID=id9844;Dbxref=GeneID:1103032;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 0.40%2C E-value 40;gbkey=misc_feature;gene=SC7H9.06
NC_003888.3	RefSeq	gene	8421086	8422261	.	-	.	ID=gene7658;Dbxref=GeneID:1103033;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=SCO7595
NC_003888.3	RefSeq	CDS	8421086	8422261	.	-	0	ID=cds7523;Parent=gene7658;Dbxref=Genbank:NP_631637.1,GeneID:1103033;Name=NP_631637.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=NP_631637.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8422268	8422273	.	-	.	ID=id9845;gbkey=RBS
NC_003888.3	RefSeq	gene	8422299	8423870	.	-	.	ID=gene7659;Dbxref=GeneID:1103034;Name=SC7H9.08c;gbkey=Gene;gene=SC7H9.08c;gene_biotype=protein_coding;gene_synonym=SC7H9.08c;locus_tag=SCO7596
NC_003888.3	RefSeq	CDS	8422299	8423870	.	-	0	ID=cds7524;Parent=gene7659;Dbxref=Genbank:NP_631638.1,GeneID:1103034;Name=NP_631638.1;Note=SC7H9.08c%2C probable integral membrane transport protein%2C len: 523 aa%3B similar to SW:SGLT_VIBPA (EMBL:D78137) Vibrio parahaemolyticus sodium/glucose co-transporter (Na(+)/glucose symporter) SglT%2C 543 aa%3B fasta scores: opt: 445 z-score: 513.1 E(): 4.8e-21%3B 24.4%25 identity in 471 aa overlap. Contains Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC7H9.08c;product=integral membrane transport protein;protein_id=NP_631638.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8422539	8423774	.	-	.	ID=id9846;Dbxref=GeneID:1103034;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score -5.90%2C E-value 1.3e-07;gbkey=misc_feature;gene=SC7H9.08c
NC_003888.3	RefSeq	ribosome_entry_site	8423876	8423880	.	-	.	ID=id9847;gbkey=RBS
NC_003888.3	RefSeq	gene	8423879	8424877	.	-	.	ID=gene7660;Dbxref=GeneID:1103035;Name=SC7H9.09c;gbkey=Gene;gene=SC7H9.09c;gene_biotype=protein_coding;gene_synonym=SC7H9.09c;locus_tag=SCO7597
NC_003888.3	RefSeq	CDS	8423879	8424877	.	-	0	ID=cds7525;Parent=gene7660;Dbxref=Genbank:NP_631639.1,GeneID:1103035;Name=NP_631639.1;Note=SC7H9.09c%2C hypothetical protein%2C len: 332 aa%3B similar to TR:Q9EX11 (EMBL:AL445503) Streptomyces coelicolor hypothetical 33.0 kDa protein 2SCG38.08%2C 332 aa%3B fasta scores: opt: 619 z-score: 588.5 E(): 3e-25%3B 45.3%25 identity in 329 aa overlap. High content in alanine amino acid residues;gbkey=CDS;gene=SC7H9.09c;product=hypothetical protein;protein_id=NP_631639.1;transl_table=11
NC_003888.3	RefSeq	gene	8424898	8425014	.	+	.	ID=gene7661;Dbxref=GeneID:1103036;Name=SC7H9.10;gbkey=Gene;gene=SC7H9.10;gene_biotype=protein_coding;gene_synonym=SC7H9.10;locus_tag=SCO7598
NC_003888.3	RefSeq	CDS	8424898	8425014	.	+	0	ID=cds7526;Parent=gene7661;Dbxref=Genbank:NP_631640.1,GeneID:1103036;Name=NP_631640.1;Note=SC7H9.10%2C unknown%2C len: 38 aa. Doubtful CDS%2C low content in G+C (63.15%25);gbkey=CDS;gene=SC7H9.10;product=hypothetical protein;protein_id=NP_631640.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8425061	8425068	.	+	.	ID=id9848;gbkey=RBS
NC_003888.3	RefSeq	gene	8425073	8426008	.	+	.	ID=gene7662;Dbxref=GeneID:1103037;Name=SC7H9.11;gbkey=Gene;gene=SC7H9.11;gene_biotype=protein_coding;gene_synonym=SC7H9.11;locus_tag=SCO7599
NC_003888.3	RefSeq	CDS	8425073	8426008	.	+	0	ID=cds7527;Parent=gene7662;Dbxref=Genbank:NP_631641.1,GeneID:1103037;Name=NP_631641.1;Note=SC7H9.11%2C probable transcriptional regulator%2C len: 311 aa%3B similar to SW:HEXR_ECOLI (EMBL:AE000279) Escherichia coli Hex regulon repressor HexR%2C 289 aa%3B fasta scores: opt: 428 z-score: 486.6 E(): 1.4e-19%3B 31.9%25 identity in 285 aa overlap. Contains Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family and PF01380 SIS%2C SIS domain. Also contains possible helix-turn-helix motif at residues 54..75 (+3.19 SD);gbkey=CDS;gene=SC7H9.11;product=transcriptional regulator;protein_id=NP_631641.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8425130	8425468	.	+	.	ID=id9849;Dbxref=GeneID:1103037;Note=Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family%2C score 68.50%2C E-value 1.4e-16;gbkey=misc_feature;gene=SC7H9.11
NC_003888.3	RefSeq	sequence_feature	8425514	8425921	.	+	.	ID=id9850;Dbxref=GeneID:1103037;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 108.30%2C E-value 1.5e-28;gbkey=misc_feature;gene=SC7H9.11
NC_003888.3	RefSeq	gene	8426016	8427230	.	-	.	ID=gene7663;Dbxref=GeneID:1103038;Name=SC7H9.12c;gbkey=Gene;gene=SC7H9.12c;gene_biotype=protein_coding;gene_synonym=SC7H9.12c;locus_tag=SCO7600
NC_003888.3	RefSeq	CDS	8426016	8427230	.	-	0	ID=cds7528;Parent=gene7663;Dbxref=Genbank:NP_631642.1,GeneID:1103038;Name=NP_631642.1;Note=SC7H9.12c%2C possible alanyl tRNA synthetase%2C len: 404 aa%3B similar to N-terminal region of SW:SYA_THIFE (EMBL:X95571) Thiobacillus ferrooxidans alanyl-tRNA-synthetase (EC 6.1.1.7) AlaS%2C 877 aa%3B fasta scores: opt: 728 z-score: 825.4 E(): 0%3B 37.4%25 identity in 425 aa overlap. Contains Pfam match to entry PF01411 tRNA-synt_2c%2C tRNA synthetases class II (A) and matches to Prosite entries PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2 and PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC7H9.12c;product=alanyl tRNA synthetase;protein_id=NP_631642.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8426349	8427218	.	-	.	ID=id9851;Dbxref=GeneID:1103038;Note=Pfam match to entry PF01411 tRNA-synt_2c%2C tRNA synthetases class II (A)%2C score 236.70%2C E-value 7.3e-68;gbkey=misc_feature;gene=SC7H9.12c
NC_003888.3	RefSeq	sequence_feature	8426532	8426555	.	-	.	ID=id9852;Dbxref=GeneID:1103038;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC7H9.12c
NC_003888.3	RefSeq	sequence_feature	8426547	8426576	.	-	.	ID=id9853;Dbxref=GeneID:1103038;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2;gbkey=misc_feature;gene=SC7H9.12c
NC_003888.3	RefSeq	ribosome_entry_site	8427238	8427243	.	-	.	ID=id9854;gbkey=RBS
NC_003888.3	RefSeq	gene	8427526	8428998	.	-	.	ID=gene7664;Dbxref=GeneID:1103039;Name=SC7H9.13c;gbkey=Gene;gene=SC7H9.13c;gene_biotype=protein_coding;gene_synonym=SC7H9.13c;locus_tag=SCO7601
NC_003888.3	RefSeq	CDS	8427526	8428998	.	-	0	ID=cds7529;Parent=gene7664;Dbxref=Genbank:NP_631643.1,GeneID:1103039;Name=NP_631643.1;Note=SC7H9.13c%2C probable amidase%2C len: 490 aa%3B similar to TR:Q9LCX3 (EMBL:AF202447) Thermus aquaticus Glu/Asp-tRNA amidotransferase subunit A%2C GatA%2C 471 aa%3B fasta scores: opt: 614 z-score: 609.3 E(): 2.1e-26%3B 34.7%25 identity in 470 aa overlap. Contains Pfam match to entry PF01425 Amidase%2C Amidase and match to Prosite entry PS00571 Amidases signature;gbkey=CDS;gene=SC7H9.13c;product=amidase;protein_id=NP_631643.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8427631	8428815	.	-	.	ID=id9855;Dbxref=GeneID:1103039;Note=Pfam match to entry PF01425 Amidase%2C Amidase%2C score 268.00%2C E-value 1.3e-76;gbkey=misc_feature;gene=SC7H9.13c
NC_003888.3	RefSeq	sequence_feature	8428471	8428566	.	-	.	ID=id9856;Dbxref=GeneID:1103039;Note=PS00571 Amidases signature;gbkey=misc_feature;gene=SC7H9.13c
NC_003888.3	RefSeq	ribosome_entry_site	8429004	8429010	.	-	.	ID=id9857;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8429117	8429120	.	+	.	ID=id9858;gbkey=RBS
NC_003888.3	RefSeq	gene	8429126	8429713	.	+	.	ID=gene7665;Dbxref=GeneID:1103040;Name=SC7H9.14;gbkey=Gene;gene=SC7H9.14;gene_biotype=protein_coding;gene_synonym=SC7H9.14;locus_tag=SCO7602
NC_003888.3	RefSeq	CDS	8429126	8429713	.	+	0	ID=cds7530;Parent=gene7665;Dbxref=Genbank:NP_631644.1,GeneID:1103040;Name=NP_631644.1;Note=SC7H9.14%2C probable tetR-family transcriptional regulator%2C len: 195 aa%3B similar to TR:O53323 (EMBL:AL021646) Mycobacterium tuberculosis regulatory protein MTV014.17c%2C 200 aa%3B fasta scores: opt: 319 z-score: 395.7 E(): 1.7e-14%3B 33.3%25 identity in 195 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family. Also contains possible helix-turn-helix motif at residues 36..57 (+3.70 SD);gbkey=CDS;gene=SC7H9.14;product=TetR family transcriptional regulator;protein_id=NP_631644.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8429183	8429323	.	+	.	ID=id9859;Dbxref=GeneID:1103040;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 63.50%2C E-value 4.4e-15;gbkey=misc_feature;gene=SC7H9.14
NC_003888.3	RefSeq	gene	8429821	8430771	.	-	.	ID=gene7666;Dbxref=GeneID:1103041;Name=SC2H2.01c;gbkey=Gene;gene=SC2H2.01c;gene_biotype=protein_coding;gene_synonym=SC2H2.01c,SC7H9.15c;locus_tag=SCO7603
NC_003888.3	RefSeq	CDS	8429821	8430771	.	-	0	ID=cds7531;Parent=gene7666;Dbxref=Genbank:NP_733739.1,GeneID:1103041;Name=NP_733739.1;Note=SC2H2.01c%2C probable lysR-family transcriptional regulator (fragment)%2C len: >162 aa%3B similar to N-terminal domain of SW:TFDR_ALCEU (EMBL:M98445) Alcaligenes eutrophus transcriptional regulatory protein TdfR/TdfS%2C 295 aa%3B fasta scores: opt: 240 z-score: 294.4 E(): 7.3e-09%3B 37.2%25 identity in 145 aa overlap and of TR:CAB55524 (EMBL:AL117322) Streptomyces coelicolor LysR-family transcriptional regulator SCF1.04%2C 311 aa%3B fasta scores: opt: 461 z-score: 473.3 E(): 1.1e-20%3B 51.0%25 identity in 153 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and match to Prosite entry PS00044 Bacterial regulatory proteins%2C lysR family signature. Also contains possible helix-turn-helix motif at residues 24..45 (+4.95 SD)~SC7H9.15c%2C possible regulatory protein (fragment)%2C len: >187 aa%3B similar to TR:O88132 (EMBL:AJ006517) Streptomyces lipmanii lysR-type transcriptional regulator StgR%2C 327 aa%3B fasta scores: opt: 253 z-score: 307.5 E(): 1.4e-09%3B 30.5%25 identity in 187 aa overlap;gbkey=CDS;gene=SC2H2.01c;product=LysR family transcriptional regulator;protein_id=NP_733739.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8430334	8430753	.	-	.	ID=id9860;Dbxref=GeneID:1103041;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 96.80%2C E-value 4.3e-25;gbkey=misc_feature;gene=SC2H2.01c
NC_003888.3	RefSeq	sequence_feature	8430619	8430711	.	-	.	ID=id9861;Dbxref=GeneID:1103041;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature;gbkey=misc_feature;gene=SC2H2.01c
NC_003888.3	RefSeq	gene	8430895	8431779	.	+	.	ID=gene7667;Dbxref=GeneID:1103042;Name=SC2H2.02;gbkey=Gene;gene=SC2H2.02;gene_biotype=protein_coding;gene_synonym=SC2H2.02;locus_tag=SCO7604
NC_003888.3	RefSeq	CDS	8430895	8431779	.	+	0	ID=cds7532;Parent=gene7667;Dbxref=Genbank:NP_631645.1,GeneID:1103042;Name=NP_631645.1;Note=SC2H2.02%2C hypothetical protein%2C len: 294 aa%3B similar to TR:Q9S1Z5 (EMBL:AL109747) Streptomyces coelicolor hypothetical protein SCJ21.12c%2C 279 aa%3B fasta scores: opt: 321 z-score: 379.2 E(): 1.4e-13%3B 33.1%25 identity in 278 aa overlap;gbkey=CDS;gene=SC2H2.02;product=hypothetical protein;protein_id=NP_631645.1;transl_table=11
NC_003888.3	RefSeq	gene	8431787	8433208	.	-	.	ID=gene7668;Dbxref=GeneID:1103043;Name=SC2H2.03c;gbkey=Gene;gene=SC2H2.03c;gene_biotype=protein_coding;gene_synonym=SC2H2.03c;locus_tag=SCO7605
NC_003888.3	RefSeq	CDS	8431787	8433208	.	-	0	ID=cds7533;Parent=gene7668;Dbxref=Genbank:NP_631646.1,GeneID:1103043;Name=NP_631646.1;Note=SC2H2.03c%2C possible metallopeptidase%2C len: 473 aa%3B low similarity to TR:Q9X7P2 (EMBL:AL049587) Streptomyces coelicolor  metallopeptidase SC5F2A.19c%2C 506 aa%3B fasta scores: opt: 226 z-score: 242.7 E(): 5.5e-06%3B 23.7%25 identity in 363 aa overlap. Contains Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1 and match to Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC2H2.03c;product=metallopeptidase;protein_id=NP_631646.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8432087	8432200	.	-	.	ID=id9862;Dbxref=GeneID:1103043;Note=Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1%2C score 13.60%2C E-value 0.00015;gbkey=misc_feature;gene=SC2H2.03c
NC_003888.3	RefSeq	sequence_feature	8432174	8432203	.	-	.	ID=id9863;Dbxref=GeneID:1103043;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC2H2.03c
NC_003888.3	RefSeq	gene	8433408	8434529	.	+	.	ID=gene7669;Dbxref=GeneID:1103044;Name=SC2H2.04;gbkey=Gene;gene=SC2H2.04;gene_biotype=protein_coding;gene_synonym=SC2H2.04;locus_tag=SCO7606
NC_003888.3	RefSeq	CDS	8433408	8434529	.	+	0	ID=cds7534;Parent=gene7669;Dbxref=Genbank:NP_631647.1,GeneID:1103044;Name=NP_631647.1;Note=SC2H2.04%2C possible amino acid binding protein%2C len: 373 aa%3B low similarity to TR:O68027 (EMBL:AF010496) Rhodobacter capsulatus potential Leu/Ile/Val-binding protein precursor%2C 400 aa%3B fasta scores: opt: 226 z-score: 253.4 E(): 1.4e-06%3B 25.2%25 identity in 322 aa overlap;gbkey=CDS;gene=SC2H2.04;product=amino acid binding protein;protein_id=NP_631647.1;transl_table=11
NC_003888.3	RefSeq	gene	8434553	8435734	.	-	.	ID=gene7670;Dbxref=GeneID:1103045;Name=SC2H2.05c;gbkey=Gene;gene=SC2H2.05c;gene_biotype=protein_coding;gene_synonym=SC2H2.05c;locus_tag=SCO7607
NC_003888.3	RefSeq	CDS	8434553	8435734	.	-	0	ID=cds7535;Parent=gene7670;Dbxref=Genbank:NP_631648.1,GeneID:1103045;Name=NP_631648.1;Note=SC2H2.05c%2C possible hydrolase%2C len: 393 aa%3B similar to SW:DAC_STRSQ (EMBL:M26842) Streptomyces sp. D-alanyl-D-alanine carboxypeptidase precursor (EC 3.4.16.4)%2C 372 aa%3B fasta scores: opt: 313 z-score: 344.0 E(): 1.3e-11%3B 33.8%25 identity in 364 aa overlap;gbkey=CDS;gene=SC2H2.05c;product=hydrolase;protein_id=NP_631648.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8435681	8435684	.	-	.	ID=id9864;Dbxref=GeneID:1103045;gbkey=RBS;gene=SC2H2.05c
NC_003888.3	RefSeq	gene	8435801	8436253	.	+	.	ID=gene7671;Dbxref=GeneID:1103046;Name=SC2H2.06;gbkey=Gene;gene=SC2H2.06;gene_biotype=protein_coding;gene_synonym=SC2H2.06;locus_tag=SCO7608
NC_003888.3	RefSeq	CDS	8435801	8436253	.	+	0	ID=cds7536;Parent=gene7671;Dbxref=Genbank:NP_631649.1,GeneID:1103046;Name=NP_631649.1;Note=SC2H2.06%2C hypothetical protein%2C len: 150 aa%3B similar to TR:Q9L0J1 (EMBL:AL161691) Streptomyces coelicolor hypothetical 15.7 kDa protein SCD40A.20%2C 145 aa%3B fasta scores: opt: 335 z-score: 414.8 E(): 1.4e-15%3B 45.0%25 identity in 120 aa overlap;gbkey=CDS;gene=SC2H2.06;product=hypothetical protein;protein_id=NP_631649.1;transl_table=11
NC_003888.3	RefSeq	gene	8436288	8436974	.	-	.	ID=gene7672;Dbxref=GeneID:1103047;Name=SC2H2.07c;gbkey=Gene;gene=SC2H2.07c;gene_biotype=protein_coding;gene_synonym=SC2H2.07c;locus_tag=SCO7609
NC_003888.3	RefSeq	CDS	8436288	8436974	.	-	0	ID=cds7537;Parent=gene7672;Dbxref=Genbank:NP_631650.1,GeneID:1103047;Name=NP_631650.1;Note=SC2H2.07c%2C possible esterase%2C len: 228 aa%3B low similarity to TR:Q9K3V2 (EMBL:AL359988) Streptomyces coelicolor esterase SCD10.24%2C 241 aa%3B fasta scores: opt: 169 z-score: 195.6 E(): 0.0023%3B 28.0%25 identity in 236 aa overlap;gbkey=CDS;gene=SC2H2.07c;product=esterase;protein_id=NP_631650.1;transl_table=11
NC_003888.3	RefSeq	gene	8437174	8438154	.	+	.	ID=gene7673;Dbxref=GeneID:1103048;Name=SC2H2.08;gbkey=Gene;gene=SC2H2.08;gene_biotype=protein_coding;gene_synonym=SC2H2.08;locus_tag=SCO7610
NC_003888.3	RefSeq	CDS	8437174	8438154	.	+	0	ID=cds7538;Parent=gene7673;Dbxref=Genbank:NP_631651.1,GeneID:1103048;Name=NP_631651.1;Note=SC2H2.08%2C possible transcriptional regulator%2C len: 371 aa%3B similar to many other Streptomyces coelicolor transcriptional regulators%2C e.g. TR:Q9KYU5 (EMBL:AL355832) DeoR-family transcriptional regulator SCE22.17%2C 323 aa%3B fasta scores: opt: 458 z-score: 518.3 E(): 2.4e-21%3B 32.3%25 identity in 319 aa overlap. Contains possible helix-turn-helix motif at residues 24..45 (+3.61 SD);gbkey=CDS;gene=SC2H2.08;product=transcriptional regulator;protein_id=NP_631651.1;transl_table=11
NC_003888.3	RefSeq	gene	8438157	8438870	.	+	.	ID=gene7674;Dbxref=GeneID:1103049;Name=SC2H2.09;gbkey=Gene;gene=SC2H2.09;gene_biotype=protein_coding;gene_synonym=SC2H2.09;locus_tag=SCO7611
NC_003888.3	RefSeq	CDS	8438157	8438870	.	+	0	ID=cds7539;Parent=gene7674;Dbxref=Genbank:NP_631652.1,GeneID:1103049;Name=NP_631652.1;Note=SC2H2.09%2C conserved hypothetical protein%2C len: 237 aa%3B similar to TR:O06738 (EMBL:Y09476) Bacillus subtilis YitC protein%2C 228 aa%3B fasta scores: opt: 320 z-score: 384.6 E(): 6.9e-14%3B 32.2%25 identity in 199 aa overlap;gbkey=CDS;gene=SC2H2.09;product=hypothetical protein;protein_id=NP_631652.1;transl_table=11
NC_003888.3	RefSeq	gene	8438874	8439524	.	-	.	ID=gene7675;Dbxref=GeneID:1103050;Name=SC2H2.10c;gbkey=Gene;gene=SC2H2.10c;gene_biotype=protein_coding;gene_synonym=SC2H2.10c;locus_tag=SCO7612
NC_003888.3	RefSeq	CDS	8438874	8439524	.	-	0	ID=cds7540;Parent=gene7675;Dbxref=Genbank:NP_631653.1,GeneID:1103050;Name=NP_631653.1;Note=SC2H2.10c%2C hypothetical protein%2C len: 216 aa%3B similar to TR:O86515 (EMBL:AL031124) Streptomyces coelicolor hypothetical 20.0 kDa protein SC1C2.14c%2C 185 aa%3B fasta scores: opt: 633 z-score: 752.2 E(): 0%3B 50.0%25 identity in 184 aa overlap;gbkey=CDS;gene=SC2H2.10c;product=hypothetical protein;protein_id=NP_631653.1;transl_table=11
NC_003888.3	RefSeq	gene	8439704	8442160	.	-	.	ID=gene7676;Dbxref=GeneID:1103051;Name=SC2H2.11c;gbkey=Gene;gene=SC2H2.11c;gene_biotype=protein_coding;gene_synonym=SC2H2.11c;locus_tag=SCO7613
NC_003888.3	RefSeq	CDS	8439704	8442160	.	-	0	ID=cds7541;Parent=gene7676;Dbxref=Genbank:NP_631654.1,GeneID:1103051;Name=NP_631654.1;Note=SC2H2.11c%2C possible integral membrane protein%2C len: 818 aa. Contains possible hydrophobic membrane spanning regions and 4x degenerate repeat unit: SRTGG;gbkey=CDS;gene=SC2H2.11c;product=hypothetical protein;protein_id=NP_631654.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8440361	8440420	.	-	.	ID=id9865;Dbxref=GeneID:1103051;Note=4x degenerate repeat translated in SC2H2.11c;gbkey=misc_feature;gene=SC2H2.11c
NC_003888.3	RefSeq	ribosome_entry_site	8442162	8442165	.	-	.	ID=id9866;gbkey=RBS
NC_003888.3	RefSeq	gene	8442244	8442765	.	-	.	ID=gene7677;Dbxref=GeneID:1103052;Name=SC2H2.12c;gbkey=Gene;gene=SC2H2.12c;gene_biotype=protein_coding;gene_synonym=SC2H2.12c;locus_tag=SCO7614
NC_003888.3	RefSeq	CDS	8442244	8442765	.	-	0	ID=cds7542;Parent=gene7677;Dbxref=Genbank:NP_631655.1,GeneID:1103052;Name=NP_631655.1;Note=SC2H2.12c%2C possible regulatory protein%2C len: 173 aa%3B similar to TR:Q9L1E5 (EMBL:AL157916) Streptomyces coelicolor  AbaA-like regulatory protein SC3D11.17%2C 220 aa%3B fasta scores: opt: 232 z-score: 287.6 E(): 1.8e-08%3B 41.1%25 identity in 129 aa overlap. Contains TTA leucine codon (37) possible target for bldA regulation;gbkey=CDS;gene=SC2H2.12c;product=regulatory protein;protein_id=NP_631655.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8442655	8442657	.	-	.	ID=id9867;Dbxref=GeneID:1103052;Note=TTA leucine codon. Possible target for bldA regulation;gbkey=misc_feature;gene=SC2H2.12c
NC_003888.3	RefSeq	ribosome_entry_site	8442851	8442859	.	+	.	ID=id9868;gbkey=RBS
NC_003888.3	RefSeq	gene	8442864	8443736	.	+	.	ID=gene7678;Dbxref=GeneID:1103053;Name=SC2H2.13;gbkey=Gene;gene=SC2H2.13;gene_biotype=protein_coding;gene_synonym=SC2H2.13;locus_tag=SCO7615
NC_003888.3	RefSeq	CDS	8442864	8443736	.	+	0	ID=cds7543;Parent=gene7678;Dbxref=Genbank:NP_631656.1,GeneID:1103053;Name=NP_631656.1;Note=SC2H2.13%2C possible DNA-binding protein%2C len: 290 aa%3B similar to many Streptomyces coelicolor DNA-binding proteins%2C e.g. TR:CAC01466 (EMBL:AL391014) DNA-binding protein 2SCG1.17%2C 286 aa%3B fasta scores: opt: 613 z-score: 722.6 E(): 1e-32%3B 41.8%25 identity in 261 aa overlap and TR:CAA20634 (EMBL:AL031515) hypothetical protein SC5C7.22c%2C 287 aa%3B fasta scores: opt: 917 z-score: 1027.9 E(): 0%3B 50.0%25 identity in 292 aa overlap. Contains possible helix-turn-helix motif at residues 33..54 (+4.70 SD);gbkey=CDS;gene=SC2H2.13;product=DNA-binding protein;protein_id=NP_631656.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8443722	8443727	.	+	.	ID=id9869;Dbxref=GeneID:1103053;gbkey=RBS;gene=SC2H2.13
NC_003888.3	RefSeq	gene	8443733	8444002	.	+	.	ID=gene7679;Dbxref=GeneID:1103054;Name=SC2H2.14;gbkey=Gene;gene=SC2H2.14;gene_biotype=protein_coding;gene_synonym=SC2H2.14;locus_tag=SCO7616
NC_003888.3	RefSeq	CDS	8443733	8444002	.	+	0	ID=cds7544;Parent=gene7679;Dbxref=Genbank:NP_631657.1,GeneID:1103054;Name=NP_631657.1;Note=SC2H2.14%2C possible AbaA-like protein%2C len: 89 aa%3B similar to TR:Q53896 (EMBL:X60316) Streptomyces coelicolor regulator AbaA or SCF42.13%2C 75 aa%3B fasta scores: opt: 209 z-score: 274.1 E(): 9.8e-08%3B 47.3%25 identity in 74 aa overlap;gbkey=CDS;gene=SC2H2.14;product=AbaA-like protein;protein_id=NP_631657.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8443984	8443988	.	+	.	ID=id9870;Dbxref=GeneID:1103054;gbkey=RBS;gene=SC2H2.14
NC_003888.3	RefSeq	gene	8443999	8444814	.	+	.	ID=gene7680;Dbxref=GeneID:1103055;Name=SC2H2.15;gbkey=Gene;gene=SC2H2.15;gene_biotype=protein_coding;gene_synonym=SC2H2.15;locus_tag=SCO7617
NC_003888.3	RefSeq	CDS	8443999	8444814	.	+	0	ID=cds7545;Parent=gene7680;Dbxref=Genbank:NP_631658.1,GeneID:1103055;Name=NP_631658.1;Note=SC2H2.15%2C hypothetical protein%2C len: 271 aa%3B similar to many Streptomyces coelicolor hypothetical proteins%2C e.g. TR:O86718 (EMBL:AL031515) hypothetical 29.3 kDa protein SC5C7.21c%2C 271 aa%3B fasta scores: opt: 863 z-score: 1030.6 E(): 0%3B 51.5%25 identity in 274 aa overlap;gbkey=CDS;gene=SC2H2.15;product=hypothetical protein;protein_id=NP_631658.1;transl_table=11
NC_003888.3	RefSeq	gene	8444820	8445614	.	+	.	ID=gene7681;Dbxref=GeneID:1103056;Name=SC2H2.16;gbkey=Gene;gene=SC2H2.16;gene_biotype=protein_coding;gene_synonym=SC2H2.16;locus_tag=SCO7618
NC_003888.3	RefSeq	CDS	8444820	8445614	.	+	0	ID=cds7546;Parent=gene7681;Dbxref=Genbank:NP_631659.1,GeneID:1103056;Name=NP_631659.1;Note=SC2H2.16%2C probable transcriptional regulator%2C len: 264 aa%3B similar to SW:GYLR_STRGR (EMBL:M37327) Streptomyces griseus glycerol operon regulatory protein GylR%2C 254 aa%3B fasta scores: opt: 270 z-score: 322.5 E(): 2e-10%3B 34.0%25 identity in 253 aa overlap. Contains Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator and possible helix-turn-helix motif at residues 42..63 (+3.28 SD);gbkey=CDS;gene=SC2H2.16;product=transcriptional regulator;protein_id=NP_631659.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8445054	8445596	.	+	.	ID=id9871;Dbxref=GeneID:1103056;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 53.30%2C E-value 5.3e-12;gbkey=misc_feature;gene=SC2H2.16
NC_003888.3	RefSeq	ribosome_entry_site	8445686	8445691	.	+	.	ID=id9872;gbkey=RBS
NC_003888.3	RefSeq	gene	8445701	8446105	.	+	.	ID=gene7682;Dbxref=GeneID:1103057;Name=SC2H2.17;gbkey=Gene;gene=SC2H2.17;gene_biotype=protein_coding;gene_synonym=SC2H2.17;locus_tag=SCO7619
NC_003888.3	RefSeq	CDS	8445701	8446105	.	+	0	ID=cds7547;Parent=gene7682;Dbxref=Genbank:NP_631660.1,GeneID:1103057;Name=NP_631660.1;Note=SC2H2.17%2C probable anti sigma factor antagonist%2C len: 134 aa%3B similar to SW:RSBV_STRCO (EMBL:AF134889) Streptomyces coelicolor anti-sigma B factor antagonist RsvB or BldG or SCH5.12c%2C 113 aa%3B fasta scores: opt: 263 z-score: 348.2 E(): 7.3e-12%3B 41.2%25 identity in 97 aa overlap. Contains Pfam match to entry PF01740 STAS%2C STAS domain;gbkey=CDS;gene=SC2H2.17;product=anti sigma factor antagonist;protein_id=NP_631660.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8445734	8446048	.	+	.	ID=id9873;Dbxref=GeneID:1103057;Note=Pfam match to entry PF01740 STAS%2C STAS domain%2C score 50.70%2C E-value 3.1e-11;gbkey=misc_feature;gene=SC2H2.17
NC_003888.3	RefSeq	gene	8446200	8446559	.	+	.	ID=gene7683;Dbxref=GeneID:1103058;Name=SC2H2.18;gbkey=Gene;gene=SC2H2.18;gene_biotype=protein_coding;gene_synonym=SC2H2.18;locus_tag=SCO7620
NC_003888.3	RefSeq	CDS	8446200	8446559	.	+	0	ID=cds7548;Parent=gene7683;Dbxref=Genbank:NP_631661.1,GeneID:1103058;Name=NP_631661.1;Note=SC2H2.18%2C hypothetical protein%2C len: 119 aa%3B similar to TR:Q9K4K9 (EMBL:AL357613) Streptomyces coelicolor hypothetical 13.1 kDa protein SC5F8.15c%2C 117 aa%3B fasta scores: opt: 382 z-score: 486.2 E(): 1.5e-19%3B 53.0%25 identity in 117 aa overlap;gbkey=CDS;gene=SC2H2.18;product=hypothetical protein;protein_id=NP_631661.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8446689	8446695	.	+	.	ID=id9874;gbkey=RBS
NC_003888.3	RefSeq	gene	8446701	8447144	.	+	.	ID=gene7684;Dbxref=GeneID:1103059;Name=SC2H2.19;gbkey=Gene;gene=SC2H2.19;gene_biotype=protein_coding;gene_synonym=SC2H2.19;locus_tag=SCO7621
NC_003888.3	RefSeq	CDS	8446701	8447144	.	+	0	ID=cds7549;Parent=gene7684;Dbxref=Genbank:NP_631662.1,GeneID:1103059;Name=NP_631662.1;Note=SC2H2.19%2C conserved hypothetical protein%2C len: 147 aa%3B low similarity to TR:AAG05206 (EMBL:AE004608) Pseudomonas aeruginosa hypothetical 14.4 kDa protein PA1817%2C 129 aa%3B fasta scores: opt: 142 z-score: 193.7 E(): 0.0029%3B 30.5%25 identity in 131 aa overlap;gbkey=CDS;gene=SC2H2.19;product=hypothetical protein;protein_id=NP_631662.1;transl_table=11
NC_003888.3	RefSeq	gene	8447193	8448644	.	-	.	ID=gene7685;Dbxref=GeneID:1103060;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;gene_synonym=pntB,SC2H2.20c;locus_tag=SCO7622
NC_003888.3	RefSeq	CDS	8447193	8448644	.	-	0	ID=cds7550;Parent=gene7685;Dbxref=Genbank:NP_631663.1,GeneID:1103060;Name=NP_631663.1;Note=SC2H2.20c%2C pntB%2C NAD(P) transhydrogenase beta subunit%2C len: 483 aa%3B similar to SW:PNTB_ECOLI (EMBL:X04195) Escherichia coli NAD(P) transhydrogenase subunit beta (EC 1.6.1.1) PntB%2C 462 aa%3B fasta scores: opt: 2012 z-score: 2208.6 E(): 0%3B 68.8%25 identity in 464 aa overlap. Contains Pfam match to entry PF02233 PNTB%2C NAD(P) transhydrogenase beta subunit. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=pntB;product=NAD(P) transhydrogenase subunit beta;protein_id=NP_631663.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8447253	8448635	.	-	.	ID=id9875;Dbxref=GeneID:1103060;Note=Pfam match to entry PF02233 PNTB%2C NAD(P) transhydrogenase beta subunit%2C score 926.80%2C E-value 5.8e-275;gbkey=misc_feature;gene=pntB
NC_003888.3	RefSeq	gene	8448650	8450224	.	-	.	ID=gene7686;Dbxref=GeneID:1103061;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;gene_synonym=SC2H2.21c;locus_tag=SCO7623
NC_003888.3	RefSeq	CDS	8448650	8450224	.	-	0	ID=cds7551;Parent=gene7686;Dbxref=Genbank:NP_631664.1,GeneID:1103061;Name=NP_631664.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=NP_631664.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8449046	8450188	.	-	.	ID=id9876;Dbxref=GeneID:1103061;Note=Pfam match to entry PF01262 AlaDh_PNT%2C Alanine dehydrogenase/pyridine nucleotide transhydrogenase%2C score 550.70%2C E-value 9.9e-162;gbkey=misc_feature;gene=pntA
NC_003888.3	RefSeq	gene	8450331	8451026	.	-	.	ID=gene7687;Dbxref=GeneID:1103062;Name=SC2H2.22c;gbkey=Gene;gene=SC2H2.22c;gene_biotype=protein_coding;gene_synonym=SC2H2.22c;locus_tag=SCO7624
NC_003888.3	RefSeq	CDS	8450331	8451026	.	-	0	ID=cds7552;Parent=gene7687;Dbxref=Genbank:NP_631665.1,GeneID:1103062;Name=NP_631665.1;Note=SC2H2.22c%2C possible tetR-family regulatory protein%2C len: 231 aa%3B similar to many other tetR-family transcriptional regulators%2C e.g. TR:CAC08314 (EMBL:AL392149) Streptomyces coelicolor  tetR-family transcriptional regulatory protein SCD19.13c%2C 268 aa%3B fasta scores: opt: 456 z-score: 539.8 E(): 1.6e-22%3B 38.4%25 identity in 232 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family;gbkey=CDS;gene=SC2H2.22c;product=TetR family transcriptional regulator;protein_id=NP_631665.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8450826	8450966	.	-	.	ID=id9877;Dbxref=GeneID:1103062;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 29.90%2C E-value 5.2e-06;gbkey=misc_feature;gene=SC2H2.22c
NC_003888.3	RefSeq	ribosome_entry_site	8451028	8451031	.	-	.	ID=id9878;gbkey=RBS
NC_003888.3	RefSeq	gene	8451080	8452201	.	+	.	ID=gene7688;Dbxref=GeneID:1103063;Name=SC2H2.23;gbkey=Gene;gene=SC2H2.23;gene_biotype=protein_coding;gene_synonym=SC2H2.23;locus_tag=SCO7625
NC_003888.3	RefSeq	CDS	8451080	8452201	.	+	0	ID=cds7553;Parent=gene7688;Dbxref=Genbank:NP_631666.1,GeneID:1103063;Name=NP_631666.1;Note=SC2H2.23%2C probable monooxygenase%2C len: 373 aa%3B similar to SW:TETX_BACFR (EMBL:M37699) Bacteroides fragilis tetracycline resistance protein TetX%2C 388 aa%3B fasta scores: opt: 598 z-score: 663.7 E(): 2e-29%3B 31.3%25 identity in 367 aa overlap. Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SC2H2.23;product=monooxygenase;protein_id=NP_631666.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8451512	8452123	.	+	.	ID=id9879;Dbxref=GeneID:1103063;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 54.50%2C E-value 2.3e-12;gbkey=misc_feature;gene=SC2H2.23
NC_003888.3	RefSeq	gene	8452226	8453704	.	-	.	ID=gene7689;Dbxref=GeneID:1103064;Name=SC2H2.24c;gbkey=Gene;gene=SC2H2.24c;gene_biotype=protein_coding;gene_synonym=SC2H2.24c;locus_tag=SCO7626
NC_003888.3	RefSeq	CDS	8452226	8453704	.	-	0	ID=cds7554;Parent=gene7689;Dbxref=Genbank:NP_631667.1,GeneID:1103064;Name=NP_631667.1;Note=SC2H2.24c%2C probable monooxygenase%2C len: 492 aa%3B similar to SW:MHPA_ECOLI (EMBL:D86239) Escherichia coli 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-) MhpA%2C 554 aa%3B fasta scores: opt: 521 z-score: 602.2 E(): 5.2e-26%3B 32.6%25 identity in 356 aa overlap. Contains Pfam matches to entries PF01494 FAD_binding_3%2C FAD binding domain and PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SC2H2.24c;product=monooxygenase;protein_id=NP_631667.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8452646	8453224	.	-	.	ID=id9880;Dbxref=GeneID:1103064;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 203.80%2C E-value 2.6e-57;gbkey=misc_feature;gene=SC2H2.24c
NC_003888.3	RefSeq	sequence_feature	8453237	8453641	.	-	.	ID=id9881;Dbxref=GeneID:1103064;Note=Pfam match to entry PF01494 FAD_binding_3%2C FAD binding domain%2C score 75.10%2C E-value 1.5e-18;gbkey=misc_feature;gene=SC2H2.24c
NC_003888.3	RefSeq	ribosome_entry_site	8453954	8453958	.	+	.	ID=id9882;gbkey=RBS
NC_003888.3	RefSeq	gene	8453968	8454549	.	+	.	ID=gene7690;Dbxref=GeneID:1103065;Name=SC2H2.25;gbkey=Gene;gene=SC2H2.25;gene_biotype=protein_coding;gene_synonym=SC2H2.25;locus_tag=SCO7627
NC_003888.3	RefSeq	CDS	8453968	8454549	.	+	0	ID=cds7555;Parent=gene7690;Dbxref=Genbank:NP_631668.1,GeneID:1103065;Name=NP_631668.1;Note=SC2H2.25%2C conserved hypothetical protein%2C len: 193 aa%3B similar to TR:Q9XBC6 (EMBL:AL078635) Amycolatopsis orientalis hypothetical 22.9 kDa protein CZA382.25%2C 205 aa%3B fasta scores: opt: 202 z-score: 256.0 E(): 1e-06%3B 31.7%25 identity in 189 aa overlap;gbkey=CDS;gene=SC2H2.25;product=hypothetical protein;protein_id=NP_631668.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8454694	8454698	.	+	.	ID=id9883;gbkey=RBS
NC_003888.3	RefSeq	gene	8454701	8455840	.	+	.	ID=gene7691;Dbxref=GeneID:1103066;Name=SC10F4.01;gbkey=Gene;gene=SC10F4.01;gene_biotype=protein_coding;gene_synonym=SC10F4.01,SC2H2.26;locus_tag=SCO7628
NC_003888.3	RefSeq	CDS	8454701	8455840	.	+	0	ID=cds7556;Parent=gene7691;Dbxref=Genbank:NP_733740.1,GeneID:1103066;Name=NP_733740.1;Note=SC10F4.01%2C conserved hypothetical protein (fragment)%2C len: >90 aa%3B similar to TR:O52799 (EMBL:AJ223998) Amycolatopsis orientalis hypothetical protein PCZA361.11%2C 495 aa%3B fasta scores: opt: 151 z-score: 192.7 E(): 0.0034%3B 35.4%25 identity in 79 aa overlap~SC2H2.26%2C conserved hypothetical protein (fragment)%2C len: >322 aa%3B similar to TR:O52799 (EMBL:AJ223998) Amycolatopsis orientalis hypothetical protein PCZA361.11%2C 495 aa%3B fasta scores: opt: 757 z-score: 813.7 E(): 0%3B 45.0%25 identity in 333 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10F4.01;product=hypothetical protein;protein_id=NP_733740.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8454803	8455666	.	+	.	ID=id9884;Dbxref=GeneID:1103066;Note=previously sequenced DNA fragment. EMBL:X94190 S.coelicolor spaA gene;gbkey=misc_feature;gene=SC10F4.01
NC_003888.3	RefSeq	sequence_feature	8455567	8457450	.	+	.	ID=id9885;Note=previously sequenced DNA fragment. EMBL:X94190 S.coelicolor spaA gene;gbkey=misc_feature
NC_003888.3	RefSeq	ribosome_entry_site	8455878	8455883	.	+	.	ID=id9886;gbkey=RBS
NC_003888.3	RefSeq	gene	8455893	8457134	.	+	.	ID=gene7692;Dbxref=GeneID:1103067;Name=SC10F4.02;gbkey=Gene;gene=SC10F4.02;gene_biotype=protein_coding;gene_synonym=SC10F4.02,spaA;locus_tag=SCO7629
NC_003888.3	RefSeq	CDS	8455893	8457134	.	+	0	ID=cds7557;Parent=gene7692;Dbxref=Genbank:NP_631669.1,GeneID:1103067;Name=NP_631669.1;Note=SC10F4.02%2C spaA%2C probable starvation sensing protein%2C len: 413 aa%3B identical to previously sequenced TR:P95726 (EMBL:X94190) Streptomyces coelicolor spaA gene%2C 413 aa. Contains Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family and match to Prosite entry PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1;gbkey=CDS;gene=SC10F4.02;product=starvation sensing protein;protein_id=NP_631669.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8455905	8457017	.	+	.	ID=id9887;Dbxref=GeneID:1103067;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme family%2C score 454.00%2C E-value 1.3e-132;gbkey=misc_feature;gene=SC10F4.02
NC_003888.3	RefSeq	sequence_feature	8456145	8456222	.	+	.	ID=id9888;Dbxref=GeneID:1103067;Note=PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1;gbkey=misc_feature;gene=SC10F4.02
NC_003888.3	RefSeq	gene	8457210	8457884	.	+	.	ID=gene7693;Dbxref=GeneID:1103068;Name=SC10F4.03;gbkey=Gene;gene=SC10F4.03;gene_biotype=protein_coding;gene_synonym=SC10F4.03;locus_tag=SCO7630
NC_003888.3	RefSeq	CDS	8457210	8457884	.	+	0	ID=cds7558;Parent=gene7693;Dbxref=Genbank:NP_631670.1,GeneID:1103068;Name=NP_631670.1;Note=SC10F4.03%2C probable isomerase%2C len: 224 aa%3B similar to SW:PMG2_ECOLI (EMBL:M97495) Escherichia coli probable phosphoglycerate mutase 2 (EC 5.4.2.1) GpmB%2C 215 aa%3B fasta scores: opt: 190 z-score: 225.8 E(): 4.8e-05%3B 28.5%25 identity in 214 aa overlap and to TR:Q9ZAX0 (EMBL:U73808) Amycolatopsis methanolica 2%2C3-PDG dependent phosphoglycerate mutase PGM%2C 205 aa%3B fasta scores: opt: 518 z-score: 596.0 E(): 1.2e-25%3B 45.5%25 identity in 202 aa overlap. Contains Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family and match to Prosite entry PS00175 Phosphoglycerate mutase family phosphohistidine signature;gbkey=CDS;gene=SC10F4.03;product=isomerase;protein_id=NP_631670.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8457219	8457674	.	+	.	ID=id9889;Dbxref=GeneID:1103068;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 56.90%2C E-value 1.3e-14;gbkey=misc_feature;gene=SC10F4.03
NC_003888.3	RefSeq	sequence_feature	8457222	8457251	.	+	.	ID=id9890;Dbxref=GeneID:1103068;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature;gbkey=misc_feature;gene=SC10F4.03
NC_003888.3	RefSeq	gene	8457868	8459757	.	-	.	ID=gene7694;Dbxref=GeneID:1103069;Name=SC10F4.04c;gbkey=Gene;gene=SC10F4.04c;gene_biotype=protein_coding;gene_synonym=SC10F4.04c;locus_tag=SCO7631
NC_003888.3	RefSeq	CDS	8457868	8459757	.	-	0	ID=cds7559;Parent=gene7694;Dbxref=Genbank:NP_631671.1,GeneID:1103069;Name=NP_631671.1;Note=SC10F4.04c%2C possible hypothetical protein%2C len: 629 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10F4.04c;product=hypothetical protein;protein_id=NP_631671.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8459763	8459766	.	-	.	ID=id9891;gbkey=RBS
NC_003888.3	RefSeq	gene	8460001	8460834	.	+	.	ID=gene7695;Dbxref=GeneID:1103070;Name=SC10F4.05;gbkey=Gene;gene=SC10F4.05;gene_biotype=protein_coding;gene_synonym=SC10F4.05;locus_tag=SCO7632
NC_003888.3	RefSeq	CDS	8460001	8460834	.	+	0	ID=cds7560;Parent=gene7695;Dbxref=Genbank:NP_631672.1,GeneID:1103070;Name=NP_631672.1;Note=SC10F4.05%2C conserved hypothetical protein%2C len: 277 aa%3B similar to TR:O52555 (EMBL:AF040570) Amycolatopsis mediterranei negative regulatory protein RifO%2C 255 aa%3B fasta scores: opt: 503 z-score: 563.6 E(): 7.4e-24%3B 36.4%25 identity in 272 aa overlap;gbkey=CDS;gene=SC10F4.05;product=hypothetical protein;protein_id=NP_631672.1;transl_table=11
NC_003888.3	RefSeq	gene	8460911	8461840	.	-	.	ID=gene7696;Dbxref=GeneID:1103071;Name=endoH;gbkey=Gene;gene=endoH;gene_biotype=protein_coding;gene_synonym=endoH,SC10F4.06c;locus_tag=SCO7633
NC_003888.3	RefSeq	CDS	8460911	8461840	.	-	0	ID=cds7561;Parent=gene7696;Dbxref=Genbank:NP_631673.1,GeneID:1103071;Name=NP_631673.1;Note=SC10F4.06c%2C  endo-beta-N-acetylglucosaminidase%2C len: 309 aa%3B highly similar to SW:EBAG_STRPL (EMBL:K02182) Streptomyces plicatus endo-beta-n-acetylglucosaminidase H precursor (EC 3.2.1.96)%2C 313 aa%3B fasta scores: opt: 1769 z-score: 1916.4 E(): 0%3B 86.9%25 identity in 312 aa overlap. Contains match to Prosite entry PS01095 Chitinases family 18 active site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=endoH;product=endo-beta-N-acetylglucosaminidase;protein_id=NP_631673.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8461331	8461357	.	-	.	ID=id9892;Dbxref=GeneID:1103071;Note=PS01095 Chitinases family 18 active site;gbkey=misc_feature;gene=endoH
NC_003888.3	RefSeq	ribosome_entry_site	8461849	8461852	.	-	.	ID=id9893;gbkey=RBS
NC_003888.3	RefSeq	gene	8461956	8463857	.	+	.	ID=gene7697;Dbxref=GeneID:1103072;Name=SC10F4.07;gbkey=Gene;gene=SC10F4.07;gene_biotype=protein_coding;gene_synonym=SC10F4.07;locus_tag=SCO7634
NC_003888.3	RefSeq	CDS	8461956	8463857	.	+	0	ID=cds7562;Parent=gene7697;Dbxref=Genbank:NP_631674.1,GeneID:1103072;Name=NP_631674.1;Note=SC10F4.07%2C unknown%2C len: 633 aa. High content in alanine%2C arginine%2C glycine and leucine amino acid residues;gbkey=CDS;gene=SC10F4.07;product=hypothetical protein;protein_id=NP_631674.1;transl_table=11
NC_003888.3	RefSeq	gene	8463880	8464428	.	-	.	ID=gene7698;Dbxref=GeneID:1103073;Name=SC10F4.08c;gbkey=Gene;gene=SC10F4.08c;gene_biotype=protein_coding;gene_synonym=SC10F4.08c,snp3;locus_tag=SCO7635
NC_003888.3	RefSeq	CDS	8463880	8464428	.	-	0	ID=cds7563;Parent=gene7698;Dbxref=Genbank:NP_631675.1,GeneID:1103073;Name=NP_631675.1;Note=SC10F4.08c%2C snp3%2C  extracellular small neutral protease%2C len: 182 aa%3B similar to SW:SNPA_STRLI (EMBL:M81703) Streptomyces lividans extracellular small neutral protease precursor (EC 3.4.24.-) SnpA%2C 227 aa%3B fasta scores: opt: 347 z-score: 398.6 E(): 1.1e-14%3B 40.7%25 identity in 140 aa overlap. Contains Pfam match to entry PF02031 Peptidase_M7%2C Streptomyces extracellular neutral proteinase (M7) family and match to Prosite entry PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10F4.08c;product=extracellular small neutral protease;protein_id=NP_631675.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8463931	8464332	.	-	.	ID=id9894;Dbxref=GeneID:1103073;Note=Pfam match to entry PF02031 Peptidase_M7%2C Streptomyces extracellular neutral proteinase (M7) family%2C score 108.00%2C E-value 1.8e-28;gbkey=misc_feature;gene=SC10F4.08c
NC_003888.3	RefSeq	sequence_feature	8464060	8464089	.	-	.	ID=id9895;Dbxref=GeneID:1103073;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature;gbkey=misc_feature;gene=SC10F4.08c
NC_003888.3	RefSeq	ribosome_entry_site	8464434	8464441	.	-	.	ID=id9896;gbkey=RBS
NC_003888.3	RefSeq	gene	8464588	8464878	.	+	.	ID=gene7699;Dbxref=GeneID:1103074;Name=SC10F4.09;gbkey=Gene;gene=SC10F4.09;gene_biotype=protein_coding;gene_synonym=SC10F4.09;locus_tag=SCO7636
NC_003888.3	RefSeq	CDS	8464588	8464878	.	+	0	ID=cds7564;Parent=gene7699;Dbxref=Genbank:NP_631676.1,GeneID:1103074;Name=NP_631676.1;Note=SC10F4.09%2C possible membrane protein%2C len: 96 aa. Contains possible hydrophobic membrane spanning region;gbkey=CDS;gene=SC10F4.09;product=hypothetical protein;protein_id=NP_631676.1;transl_table=11
NC_003888.3	RefSeq	gene	8464939	8466399	.	-	.	ID=gene7700;Dbxref=GeneID:1103075;Name=SC10F4.10c;gbkey=Gene;gene=SC10F4.10c;gene_biotype=protein_coding;gene_synonym=SC10F4.10c;locus_tag=SCO7637
NC_003888.3	RefSeq	CDS	8464939	8466399	.	-	0	ID=cds7565;Parent=gene7700;Dbxref=Genbank:NP_631677.1,GeneID:1103075;Name=NP_631677.1;Note=SC10F4.10c%2C  endoglucanase%2C len: 486 aa%3B highly similar to SW:GUNA_STRLI (EMBL:M82807) Streptomyces lividans endoglucanase CelA precursor (EC 3.2.1.4) CelA%2C 459 aa%3B fasta scores: opt: 2977 z-score: 3136.1 E(): 0%3B 97.4%25 identity in 461 aa overlap. Contains Pfam matches to entries PF00553 CBD_2%2C Cellulose binding domain and PF00150 cellulase%2C Cellulase (glycosyl hydrolase family 5) and matches to Prosite entries PS00561 Cellulose-binding domain%2C bacterial type and PS00659 Glycosyl hydrolases family 5 signature. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10F4.10c;product=endoglucanase;protein_id=NP_631677.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8465053	8465835	.	-	.	ID=id9897;Dbxref=GeneID:1103075;Note=Pfam match to entry PF00150 cellulase%2C Cellulase (glycosyl hydrolase family 5)%2C score 290.00%2C E-value 3e-83;gbkey=misc_feature;gene=SC10F4.10c
NC_003888.3	RefSeq	sequence_feature	8465458	8465487	.	-	.	ID=id9898;Dbxref=GeneID:1103075;Note=PS00659 Glycosyl hydrolases family 5 signature;gbkey=misc_feature;gene=SC10F4.10c
NC_003888.3	RefSeq	sequence_feature	8465932	8466228	.	-	.	ID=id9899;Dbxref=GeneID:1103075;Note=Pfam match to entry PF00553 CBD_2%2C Cellulose binding domain%2C score 182.10%2C E-value 7.6e-52;gbkey=misc_feature;gene=SC10F4.10c
NC_003888.3	RefSeq	sequence_feature	8465992	8466033	.	-	.	ID=id9900;Dbxref=GeneID:1103075;Note=PS00561 Cellulose-binding domain%2C bacterial type;gbkey=misc_feature;gene=SC10F4.10c
NC_003888.3	RefSeq	sequence_feature	8466434	8466846	.	+	.	ID=id9901;Note=high G+C content region (81.59%25);gbkey=misc_feature
NC_003888.3	RefSeq	gene	8466854	8468158	.	-	.	ID=gene7701;Dbxref=GeneID:1103076;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;gene_synonym=eno2,SC10F4.11c;locus_tag=SCO7638
NC_003888.3	RefSeq	CDS	8466854	8468158	.	-	0	ID=cds7566;Parent=gene7701;Dbxref=Genbank:NP_631678.1,GeneID:1103076;Name=NP_631678.1;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=phosphopyruvate hydratase;protein_id=NP_631678.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8466857	8468131	.	-	.	ID=id9902;Dbxref=GeneID:1103076;Note=Pfam match to entry PF00113 enolase%2C Enol-ase%2C score 739.90%2C E-value 1.1e-218;gbkey=misc_feature;gene=eno
NC_003888.3	RefSeq	sequence_feature	8467094	8467135	.	-	.	ID=id9903;Dbxref=GeneID:1103076;Note=PS00164 Enolase signature;gbkey=misc_feature;gene=eno
NC_003888.3	RefSeq	ribosome_entry_site	8468165	8468169	.	-	.	ID=id9904;gbkey=RBS
NC_003888.3	RefSeq	gene	8468385	8468807	.	+	.	ID=gene7702;Dbxref=GeneID:1103077;Name=SC10F4.12;gbkey=Gene;gene=SC10F4.12;gene_biotype=protein_coding;gene_synonym=SC10F4.12;locus_tag=SCO7639
NC_003888.3	RefSeq	CDS	8468385	8468807	.	+	0	ID=cds7567;Parent=gene7702;Dbxref=Genbank:NP_631679.1,GeneID:1103077;Name=NP_631679.1;Note=SC10F4.12%2C probable marR-family regulatory protein%2C len: 140 aa%3B similar to TR:AAG06455 (EMBL:AE004731) Pseudomonas aeruginosa probable transcriptional regulator PA3067%2C 147 aa%3B fasta scores: opt: 336 z-score: 402.2 E(): 7.3e-15%3B 43.0%25 identity in 142 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SC10F4.12;product=MarR family regulatory protein;protein_id=NP_631679.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8468472	8468786	.	+	.	ID=id9905;Dbxref=GeneID:1103077;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 46.50%2C E-value 5.7e-10;gbkey=misc_feature;gene=SC10F4.12
NC_003888.3	RefSeq	gene	8468827	8469810	.	-	.	ID=gene7703;Dbxref=GeneID:1103078;Name=SC10F4.13c;gbkey=Gene;gene=SC10F4.13c;gene_biotype=protein_coding;gene_synonym=SC10F4.13c;locus_tag=SCO7640
NC_003888.3	RefSeq	CDS	8468827	8469810	.	-	0	ID=cds7568;Parent=gene7703;Dbxref=Genbank:NP_631680.1,GeneID:1103078;Name=NP_631680.1;Note=SC10F4.13c%2C possible lysR-family transcriptional regulator%2C len: 327 aa%3B similar to many other Streptomyces coelicolor lysR-family transcriptional regulators%2C e.g. TR:Q9K3X6 (EMBL:AL359949) lysR-family transcriptional regulator 2SCG61.40c%2C 303 aa%3B fasta scores: opt: 376 z-score: 418.1 E(): 9.5e-16%3B 34.0%25 identity in 318 aa overlap. Contains Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family and possible helix-turn-helix motif at residues 16..37 (+5.92 SD);gbkey=CDS;gene=SC10F4.13c;product=LysR family transcriptional regulator;protein_id=NP_631680.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8469373	8469804	.	-	.	ID=id9906;Dbxref=GeneID:1103078;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 151.70%2C E-value 1.3e-41;gbkey=misc_feature;gene=SC10F4.13c
NC_003888.3	RefSeq	gene	8469909	8471105	.	+	.	ID=gene7704;Dbxref=GeneID:1103079;Name=SC10F4.14;gbkey=Gene;gene=SC10F4.14;gene_biotype=protein_coding;gene_synonym=SC10F4.14;locus_tag=SCO7641
NC_003888.3	RefSeq	CDS	8469909	8471105	.	+	0	ID=cds7569;Parent=gene7704;Dbxref=Genbank:NP_631681.1,GeneID:1103079;Name=NP_631681.1;Note=SC10F4.14%2C possible dehydrogenase%2C len: 398 aa%3B similar to many other Streptomyces coelicolor dehydrogenases%2C e.g. TR:Q9RD04 (EMBL:AL133422) dehydrogenase SCM1.40c%2C 296 aa%3B fasta scores: opt: 352 z-score: 383.2 E(): 8.2e-14%3B 33.5%25 identity in 260 aa overlap;gbkey=CDS;gene=SC10F4.14;product=dehydrogenase;protein_id=NP_631681.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8471155	8471159	.	+	.	ID=id9907;gbkey=RBS
NC_003888.3	RefSeq	gene	8471165	8471530	.	+	.	ID=gene7705;Dbxref=GeneID:1103080;Name=SC10F4.15;gbkey=Gene;gene=SC10F4.15;gene_biotype=protein_coding;gene_synonym=SC10F4.15;locus_tag=SCO7642
NC_003888.3	RefSeq	CDS	8471165	8471530	.	+	0	ID=cds7570;Parent=gene7705;Dbxref=Genbank:NP_631682.1,GeneID:1103080;Name=NP_631682.1;Note=SC10F4.15%2C conserved hypothetical protein%2C len: 121 aa%3B similar to TR:O31535 (EMBL:Z99107) Bacillus subtilis hypothetical protein YetH%2C 120 aa%3B fasta scores: opt: 176 z-score: 223.7 E(): 6.3e-05%3B 29.8%25 identity in 121 aa overlap;gbkey=CDS;gene=SC10F4.15;product=hypothetical protein;protein_id=NP_631682.1;transl_table=11
NC_003888.3	RefSeq	gene	8471548	8471823	.	+	.	ID=gene7706;Dbxref=GeneID:1103081;Name=SC10F4.16;gbkey=Gene;gene=SC10F4.16;gene_biotype=protein_coding;gene_synonym=SC10F4.16;locus_tag=SCO7643
NC_003888.3	RefSeq	CDS	8471548	8471823	.	+	0	ID=cds7571;Parent=gene7706;Dbxref=Genbank:NP_631683.1,GeneID:1103081;Name=NP_631683.1;Note=SC10F4.16%2C unknown%2C len: 91 aa;gbkey=CDS;gene=SC10F4.16;product=hypothetical protein;protein_id=NP_631683.1;transl_table=11
NC_003888.3	RefSeq	gene	8471876	8473099	.	-	.	ID=gene7707;Dbxref=GeneID:1103082;Name=SC10F4.17c;gbkey=Gene;gene=SC10F4.17c;gene_biotype=protein_coding;gene_synonym=SC10F4.17c;locus_tag=SCO7644
NC_003888.3	RefSeq	CDS	8471876	8473099	.	-	0	ID=cds7572;Parent=gene7707;Dbxref=Genbank:NP_631684.1,GeneID:1103082;Name=NP_631684.1;Note=SC10F4.17c%2C possible ATP binding protein%2C len: 407 aa%3B similar to TR:Q9KRL3 (EMBL:AE004240) Vibrio cholerae hypothetical protein VC1624%2C 414 aa%3B fasta scores: opt: 582 z-score: 689.7 E(): 7e-31%3B 29.8%25 identity in 413 aa overlap. Contains match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=CDS;gene=SC10F4.17c;product=ATP binding protein;protein_id=NP_631684.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8472149	8472172	.	-	.	ID=id9908;Dbxref=GeneID:1103082;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC10F4.17c
NC_003888.3	RefSeq	ribosome_entry_site	8473196	8473199	.	+	.	ID=id9909;gbkey=RBS
NC_003888.3	RefSeq	gene	8473207	8473920	.	+	.	ID=gene7708;Dbxref=GeneID:1103083;Name=SC10F4.18;gbkey=Gene;gene=SC10F4.18;gene_biotype=protein_coding;gene_synonym=SC10F4.18;locus_tag=SCO7645
NC_003888.3	RefSeq	CDS	8473207	8473920	.	+	0	ID=cds7573;Parent=gene7708;Dbxref=Genbank:NP_631685.1,GeneID:1103083;Name=NP_631685.1;Note=SC10F4.18%2C possible tetR-family transcriptional regulator%2C len: 237 aa%3B similar to TR:Q53901 (EMBL:M64683) Streptomyces coelicolor ORF1-4 (actII) ActII%2C 259 aa%3B fasta scores: opt: 213 z-score: 261.0 E(): 5.3e-07%3B 25.3%25 identity in 233 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 44..65 (+4.27 SD);gbkey=CDS;gene=SC10F4.18;product=TetR family transcriptional regulator;protein_id=NP_631685.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8473288	8473428	.	+	.	ID=id9910;Dbxref=GeneID:1103083;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 46.80%2C E-value 1.7e-10;gbkey=misc_feature;gene=SC10F4.18
NC_003888.3	RefSeq	ribosome_entry_site	8474045	8474048	.	+	.	ID=id9911;gbkey=RBS
NC_003888.3	RefSeq	gene	8474054	8474326	.	+	.	ID=gene7709;Dbxref=GeneID:1103084;Name=SC10F4.19;gbkey=Gene;gene=SC10F4.19;gene_biotype=protein_coding;gene_synonym=SC10F4.19;locus_tag=SCO7646
NC_003888.3	RefSeq	CDS	8474054	8474326	.	+	0	ID=cds7574;Parent=gene7709;Dbxref=Genbank:NP_631686.1,GeneID:1103084;Name=NP_631686.1;Note=SC10F4.19%2C possible membrane protein%2C len: 90 aa%3B similar to TR:O86580 (EMBL:AL031184) Streptomyces coelicolor small hydrophobic protein SC2A11.19%2C 97 aa%3B fasta scores: opt: 181 z-score: 235.5 E(): 1.4e-05%3B 44.0%25 identity in 91 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC10F4.19;product=hypothetical protein;protein_id=NP_631686.1;transl_table=11
NC_003888.3	RefSeq	stem_loop	8474346	8474394	.	+	.	ID=id9912;Note=possible stem loop. Score 59: 21/22 (95%25) matches%2C 0 gaps;gbkey=stem_loop
NC_003888.3	RefSeq	ribosome_entry_site	8474625	8474630	.	+	.	ID=id9913;gbkey=RBS
NC_003888.3	RefSeq	gene	8474635	8475174	.	+	.	ID=gene7710;Dbxref=GeneID:1103085;Name=SC10F4.20;gbkey=Gene;gene=SC10F4.20;gene_biotype=protein_coding;gene_synonym=SC10F4.20;locus_tag=SCO7647
NC_003888.3	RefSeq	CDS	8474635	8475174	.	+	0	ID=cds7575;Parent=gene7710;Dbxref=Genbank:NP_631687.1,GeneID:1103085;Name=NP_631687.1;Note=SC10F4.20%2C probable calcium binding protein%2C len: 179 aa%3B similar to SW:CBP_SACER (EMBL:M29700) Saccharopolyspora erythraea calerythrin (calcium-binding protein)%2C 177 aa%3B fasta scores: opt: 216 z-score: 256.4 E(): 9.6e-07%3B 25.5%25 identity in 165 aa overlap. Contains 3x Pfam matches to entry PF00036 efhand%2C EF hand and 2x matches to Prosite entry PS00018 EF-hand calcium-binding domain;gbkey=CDS;gene=SC10F4.20;product=calcium binding protein;protein_id=NP_631687.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8474662	8474748	.	+	.	ID=id9914;Dbxref=GeneID:1103085;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 17.20%2C E-value 0.39;gbkey=misc_feature;gene=SC10F4.20
NC_003888.3	RefSeq	sequence_feature	8474689	8474727	.	+	.	ID=id9915;Dbxref=GeneID:1103085;Note=PS00018 EF-hand calcium-binding domain;gbkey=misc_feature;gene=SC10F4.20
NC_003888.3	RefSeq	sequence_feature	8474812	8474898	.	+	.	ID=id9916;Dbxref=GeneID:1103085;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 16.10%2C E-value 0.86;gbkey=misc_feature;gene=SC10F4.20
NC_003888.3	RefSeq	sequence_feature	8474839	8474877	.	+	.	ID=id9917;Dbxref=GeneID:1103085;Note=PS00018 EF-hand calcium-binding domain;gbkey=misc_feature;gene=SC10F4.20
NC_003888.3	RefSeq	sequence_feature	8474926	8475012	.	+	.	ID=id9918;Dbxref=GeneID:1103085;Note=Pfam match to entry PF00036 efhand%2C EF hand%2C score 10.20%2C E-value 5.9;gbkey=misc_feature;gene=SC10F4.20
NC_003888.3	RefSeq	gene	8475216	8475881	.	-	.	ID=gene7711;Dbxref=GeneID:1103086;Name=SC10F4.21c;gbkey=Gene;gene=SC10F4.21c;gene_biotype=protein_coding;gene_synonym=SC10F4.21c;locus_tag=SCO7648
NC_003888.3	RefSeq	CDS	8475216	8475881	.	-	0	ID=cds7576;Parent=gene7711;Dbxref=Genbank:NP_631688.1,GeneID:1103086;Name=NP_631688.1;Note=SC10F4.21c%2C probable two-component system response regulator%2C len: 221 aa%3B similar to many other Streptomyces coelicolor response regulators%2C e.g. TR:Q9RKT8 (EMBL:AL132824) response regulator SCAH10.19%2C 229 aa%3B fasta scores: opt: 713 z-score: 802.2 E(): 0%3B 57.2%25 identity in 208 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains possible helix-turn-helix motif at residues 163..184 (+3.19 SD);gbkey=CDS;gene=SC10F4.21c;product=two-component system response regulator;protein_id=NP_631688.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8475252	8475449	.	-	.	ID=id9919;Dbxref=GeneID:1103086;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 70.80%2C E-value 3e-17;gbkey=misc_feature;gene=SC10F4.21c
NC_003888.3	RefSeq	sequence_feature	8475315	8475398	.	-	.	ID=id9920;Dbxref=GeneID:1103086;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC10F4.21c
NC_003888.3	RefSeq	sequence_feature	8475573	8475881	.	-	.	ID=id9921;Dbxref=GeneID:1103086;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 99.30%2C E-value 7.8e-26;gbkey=misc_feature;gene=SC10F4.21c
NC_003888.3	RefSeq	sequence_feature	8475919	8476008	.	-	.	ID=id9922;Note=15x degenerate repeat unit: (T/G)(T/C)CCG(G/A);gbkey=misc_feature
NC_003888.3	RefSeq	gene	8476050	8477246	.	-	.	ID=gene7712;Dbxref=GeneID:1103087;Name=SC10F4.22c;gbkey=Gene;gene=SC10F4.22c;gene_biotype=protein_coding;gene_synonym=SC10F4.22c;locus_tag=SCO7649
NC_003888.3	RefSeq	CDS	8476050	8477246	.	-	0	ID=cds7577;Parent=gene7712;Dbxref=Genbank:NP_631689.1,GeneID:1103087;Name=NP_631689.1;Note=SC10F4.22c%2C probable two-component system sensor kinase%2C len: 398 aa%3B similar to many other Streptomyces coelicolor sensor kinases%2C e.g. TR:Q9RKT9 (EMBL:AL132824) two-component sensor kinase SCAH10.18%2C 417 aa%3B fasta scores: opt: 780 z-score: 815.5 E(): 0%3B 44.0%25 identity in 348 aa overlap. Contains possible hydrophobic membrane spanning regions in the N-terminal domain;gbkey=CDS;gene=SC10F4.22c;product=two-component system sensor kinase;protein_id=NP_631689.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8477418	8477422	.	+	.	ID=id9923;gbkey=RBS
NC_003888.3	RefSeq	gene	8477428	8478900	.	+	.	ID=gene7713;Dbxref=GeneID:1103088;Name=SC10F4.23;gbkey=Gene;gene=SC10F4.23;gene_biotype=protein_coding;gene_synonym=SC10F4.23;locus_tag=SCO7650
NC_003888.3	RefSeq	CDS	8477428	8478900	.	+	0	ID=cds7578;Parent=gene7713;Dbxref=Genbank:NP_631690.1,GeneID:1103088;Name=NP_631690.1;Note=SC10F4.23%2C possible  hydrolase%2C len: 490 aa%3B similar to TR:Q9ZBJ5 (EMBL:AL035161) Streptomyces coelicolor   peptidase SC9C7.15c%2C 529 aa%3B fasta scores: opt: 678 z-score: 721.7 E(): 1.2e-32%3B 36.6%25 identity in 514 aa overlap. Contains Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10F4.23;product=hydrolase;protein_id=NP_631690.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8477788	8478840	.	+	.	ID=id9924;Dbxref=GeneID:1103088;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 51.10%2C E-value 2.5e-11;gbkey=misc_feature;gene=SC10F4.23
NC_003888.3	RefSeq	gene	8478902	8479516	.	-	.	ID=gene7714;Dbxref=GeneID:1103089;Name=SC10F4.24c;gbkey=Gene;gene=SC10F4.24c;gene_biotype=protein_coding;gene_synonym=SC10F4.24c;locus_tag=SCO7651
NC_003888.3	RefSeq	CDS	8478902	8479516	.	-	0	ID=cds7579;Parent=gene7714;Dbxref=Genbank:NP_631691.1,GeneID:1103089;Name=NP_631691.1;Note=SC10F4.24c%2C probable tetR-family transcriptional regulator%2C len: 204 aa%3B similar to TR:O34381 (EMBL:Z99112) Bacillus subtilis transcriptional regulator PksA%2C 205 aa%3B fasta scores: opt: 246 z-score: 297.6 E(): 4.9e-09%3B 27.5%25 identity in 182 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 38..59 (+2.87 SD);gbkey=CDS;gene=SC10F4.24c;product=TetR family transcriptional regulator;protein_id=NP_631691.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8479313	8479438	.	-	.	ID=id9925;Dbxref=GeneID:1103089;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 40.70%2C E-value 7.2e-09;gbkey=misc_feature;gene=SC10F4.24c
NC_003888.3	RefSeq	ribosome_entry_site	8479537	8479541	.	+	.	ID=id9926;gbkey=RBS
NC_003888.3	RefSeq	gene	8479547	8480098	.	+	.	ID=gene7715;Dbxref=GeneID:1103090;Name=SC10F4.25;gbkey=Gene;gene=SC10F4.25;gene_biotype=protein_coding;gene_synonym=SC10F4.25;locus_tag=SCO7652
NC_003888.3	RefSeq	CDS	8479547	8480098	.	+	0	ID=cds7580;Parent=gene7715;Dbxref=Genbank:NP_631692.1,GeneID:1103090;Name=NP_631692.1;Note=SC10F4.25%2C possible acetyltransferase%2C len: 183 aa%3B similar to TR:Q9Z576 (EMBL:AL035569) Streptomyces coelicolor  acetyltransferase SC8D9.15%2C 194 aa%3B fasta scores: opt: 640 z-score: 820.9 E(): 0%3B 51.4%25 identity in 181 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC10F4.25;product=acetyltransferase;protein_id=NP_631692.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8479763	8479996	.	+	.	ID=id9927;Dbxref=GeneID:1103090;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 56.30%2C E-value 6.5e-13;gbkey=misc_feature;gene=SC10F4.25
NC_003888.3	RefSeq	gene	8480189	8480911	.	-	.	ID=gene7716;Dbxref=GeneID:1103091;Name=SC10F4.26c;gbkey=Gene;gene=SC10F4.26c;gene_biotype=protein_coding;gene_synonym=SC10F4.26c;locus_tag=SCO7653
NC_003888.3	RefSeq	CDS	8480189	8480911	.	-	0	ID=cds7581;Parent=gene7716;Dbxref=Genbank:NP_631693.1,GeneID:1103091;Name=NP_631693.1;Note=SC10F4.26c%2C hypothetical fusion protein%2C len: 240 aa%3B N-terminal and C-terminal domains both similar to the same proteins%2C e.g. TR:Q9KZ80 (EMBL:AL354048) Streptomyces coelicolor hypothetical 15.9 kDa protein SCE25.06%2C 145 aa%3B blastp scores for N-terminal domain: Score %3D 130 (45.8 bits)%2C Expect %3D 3.2e-11%2C Sum P(2) %3D 3.2e-11%3B Identities %3D 39/92 (42%25)%2C Positives %3D 50/92 (54%25) and for C-terminal domain: Score %3D 72 (25.3 bits)%2C Expect %3D 0.22%2C Sum P(2) %3D 0.20%3B Identities %3D 29/90 (32%25)%2C Positives %3D 44/90 (48%25);gbkey=CDS;gene=SC10F4.26c;product=hypothetical protein;protein_id=NP_631693.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8480922	8480926	.	-	.	ID=id9928;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8481154	8481158	.	+	.	ID=id9929;gbkey=RBS
NC_003888.3	RefSeq	gene	8481163	8482020	.	+	.	ID=gene7717;Dbxref=GeneID:1103092;Name=SC10F4.27;gbkey=Gene;gene=SC10F4.27;gene_biotype=protein_coding;gene_synonym=SC10F4.27;locus_tag=SCO7654
NC_003888.3	RefSeq	CDS	8481163	8482020	.	+	0	ID=cds7582;Parent=gene7717;Dbxref=Genbank:NP_631694.1,GeneID:1103092;Name=NP_631694.1;Note=SC10F4.27%2C possible oxidoreductase%2C len: 285 aa%3B similar to many other dehydrogenases/oxidoreductases%2C e.g. TR:Q9PCP9 (EMBL:AE003996) Xylella fastidiosa phenylacetaldehyde dehydrogenase XF1729%2C 291 aa%3B fasta scores: opt: 626 z-score: 722.9 E(): 9.9e-33%3B 39.7%25 identity in 292 aa overlap;gbkey=CDS;gene=SC10F4.27;product=oxidoreductase;protein_id=NP_631694.1;transl_table=11
NC_003888.3	RefSeq	gene	8482077	8483009	.	+	.	ID=gene7718;Dbxref=GeneID:1103093;Name=SC10F4.28;gbkey=Gene;gene=SC10F4.28;gene_biotype=protein_coding;gene_synonym=SC10F4.28;locus_tag=SCO7655
NC_003888.3	RefSeq	CDS	8482077	8483009	.	+	0	ID=cds7583;Parent=gene7718;Dbxref=Genbank:NP_631695.1,GeneID:1103093;Name=NP_631695.1;Note=SC10F4.28%2C possible oxidoreductase%2C len: 310 aa%3B similar to many other oxidoreductases%2C e.g. SW:GS69_BACSU (EMBL:Y14082) Bacillus subtilis general stress protein 69%2C YhdN%2C 331 aa%3B fasta scores: opt: 299 z-score: 349.7 E(): 6.1e-12%3B 29.9%25 identity in 261 aa overlap. Contains 2x Pfam matches to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family;gbkey=CDS;gene=SC10F4.28;product=oxidoreductase;protein_id=NP_631695.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8482353	8482595	.	+	.	ID=id9930;Dbxref=GeneID:1103093;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 40.50%2C E-value 1.6e-10;gbkey=misc_feature;gene=SC10F4.28
NC_003888.3	RefSeq	sequence_feature	8482692	8482742	.	+	.	ID=id9931;Dbxref=GeneID:1103093;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 10.50%2C E-value 0.055;gbkey=misc_feature;gene=SC10F4.28
NC_003888.3	RefSeq	gene	8483077	8483598	.	+	.	ID=gene7719;Dbxref=GeneID:1103094;Name=SC10F4.29;gbkey=Gene;gene=SC10F4.29;gene_biotype=protein_coding;gene_synonym=SC10F4.29;locus_tag=SCO7656
NC_003888.3	RefSeq	CDS	8483077	8483598	.	+	0	ID=cds7584;Parent=gene7719;Dbxref=Genbank:NP_631696.1,GeneID:1103094;Name=NP_631696.1;Note=SC10F4.29%2C unknown%2C len: 173 aa;gbkey=CDS;gene=SC10F4.29;product=hypothetical protein;protein_id=NP_631696.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8483772	8483775	.	+	.	ID=id9932;gbkey=RBS
NC_003888.3	RefSeq	gene	8483781	8485538	.	+	.	ID=gene7720;Dbxref=GeneID:1103095;Name=SC10F4.30;gbkey=Gene;gene=SC10F4.30;gene_biotype=protein_coding;gene_synonym=SC10F4.30;locus_tag=SCO7657
NC_003888.3	RefSeq	CDS	8483781	8485538	.	+	0	ID=cds7585;Parent=gene7720;Dbxref=Genbank:NP_631697.1,GeneID:1103095;Name=NP_631697.1;Note=SC10F4.30%2C possible hypothetical protein%2C len: 585 aa. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10F4.30;product=hypothetical protein;protein_id=NP_631697.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8484509	8484832	.	+	.	ID=id9933;Dbxref=GeneID:1103095;Note=high content in G+C (80.86%25) and in alanine%2C arginine and glycine amino acid residues;gbkey=misc_feature;gene=SC10F4.30
NC_003888.3	RefSeq	gene	8485558	8485710	.	+	.	ID=gene7721;Dbxref=GeneID:1103096;Name=SC10F4.31;gbkey=Gene;gene=SC10F4.31;gene_biotype=protein_coding;gene_synonym=SC10F4.31;locus_tag=SCO7658
NC_003888.3	RefSeq	CDS	8485558	8485710	.	+	0	ID=cds7586;Parent=gene7721;Dbxref=Genbank:NP_631698.1,GeneID:1103096;Name=NP_631698.1;Note=SC10F4.31%2C unknown%2C len: 50 aa. TBparse predicted doubtful CDS;gbkey=CDS;gene=SC10F4.31;product=hypothetical protein;protein_id=NP_631698.1;transl_table=11
NC_003888.3	RefSeq	gene	8485671	8486792	.	-	.	ID=gene7722;Dbxref=GeneID:1103097;Name=SC10F4.32c;gbkey=Gene;gene=SC10F4.32c;gene_biotype=protein_coding;gene_synonym=SC10F4.32c;locus_tag=SCO7659
NC_003888.3	RefSeq	CDS	8485671	8486792	.	-	0	ID=cds7587;Parent=gene7722;Dbxref=Genbank:NP_631699.1,GeneID:1103097;Name=NP_631699.1;Note=SC10F4.32c%2C probable oxidoreductase%2C len: 373 aa%3B similar to SW:TETX_BACFR (EMBL:M37699) Bacteroides fragilis tetracycline resistance protein TetX%2C 388 aa%3B fasta scores: opt: 524 z-score: 576.3 E(): 1.4e-24%3B 30.2%25 identity in 374 aa overlap and to TR:CAB94636 (EMBL:AL359215) Streptomyces coelicolor hypothetical protein SC2H12.22%2C 373 aa%3B fasta scores: opt: 1709 z-score: 1482.3 E(): 0%3B 71.2%25 identity in 375 aa overlap. Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SC10F4.32c;product=oxidoreductase;protein_id=NP_631699.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8485740	8486354	.	-	.	ID=id9934;Dbxref=GeneID:1103097;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 65.60%2C E-value 1.1e-15;gbkey=misc_feature;gene=SC10F4.32c
NC_003888.3	RefSeq	ribosome_entry_site	8486798	8486803	.	-	.	ID=id9935;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8487114	8487117	.	+	.	ID=id9936;gbkey=RBS
NC_003888.3	RefSeq	gene	8487119	8487601	.	+	.	ID=gene7723;Dbxref=GeneID:1103098;Name=kcsA;gbkey=Gene;gene=kcsA;gene_biotype=protein_coding;gene_synonym=kcsA,SC10F4.33;locus_tag=SCO7660
NC_003888.3	RefSeq	CDS	8487119	8487601	.	+	0	ID=cds7588;Parent=gene7723;Dbxref=Genbank:NP_631700.1,GeneID:1103098;Name=NP_631700.1;Note=SC10F4.33%2C kcsA%2C voltage-gated potassium channel%2C len: 160 aa%3B identical to SW:KCSA_STRLI (EMBL:Z37969) Streptomyces lividans voltage-gated potassium channel KcsA%2C 160 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=kcsA;product=voltage-gated potassium channel;protein_id=NP_631700.1;transl_table=11
NC_003888.3	RefSeq	gene	8487642	8488280	.	+	.	ID=gene7724;Dbxref=GeneID:1103099;Name=SC10F4.34;gbkey=Gene;gene=SC10F4.34;gene_biotype=protein_coding;gene_synonym=SC10F4.34;locus_tag=SCO7661
NC_003888.3	RefSeq	CDS	8487642	8488280	.	+	0	ID=cds7589;Parent=gene7724;Dbxref=Genbank:NP_631701.1,GeneID:1103099;Name=NP_631701.1;Note=SC10F4.34%2C possible hypothetical protein%2C len: 212 aa%3B similar to TR:Q9XBC6 (EMBL:AL078635) Amycolatopsis orientalis hypothetical 22.9 kDa protein CZA382.25%2C 205 aa%3B fasta scores: opt: 324 z-score: 399.0 E(): 1.1e-14%3B 35.8%25 identity in 201 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC10F4.34;product=hypothetical protein;protein_id=NP_631701.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8488507	8488510	.	+	.	ID=id9937;gbkey=RBS
NC_003888.3	RefSeq	gene	8488518	8489696	.	+	.	ID=gene7725;Dbxref=GeneID:1103100;Name=cmlR2;gbkey=Gene;gene=cmlR2;gene_biotype=protein_coding;gene_synonym=cmlR2,SC10F4.35;locus_tag=SCO7662
NC_003888.3	RefSeq	CDS	8488518	8489696	.	+	0	ID=cds7590;Parent=gene7725;Dbxref=Genbank:NP_631702.1,GeneID:1103100;Name=NP_631702.1;Note=SC10F4.35%2C cmlR2%2C chloramphenicol resistance protein%2C len: 392 aa%3B identical to SW:CMLR_STRLI (EMBL:X59968) Streptomyces lividans chloramphenicol resistance protein CmlR%2C 392 aa and similar to TR:Q9KZ03 (EMBL:AL355753) Streptomyces coelicolor chloramphenicol resistance protein cmlR or SC8G12.02%2C 403 aa%3B fasta scores: opt: 942 z-score: 738.7 E(): 0%3B 40.6%25 identity in 397 aa overlap. Contains Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter and possible hydrophobic membrane spanning regions;gbkey=CDS;gene=cmlR2;product=chloramphenicol resistance protein;protein_id=NP_631702.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8488539	8489687	.	+	.	ID=id9938;Dbxref=GeneID:1103100;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -71.70%2C E-value 0.00027;gbkey=misc_feature;gene=cmlR2
NC_003888.3	RefSeq	gene	8489928	8490212	.	-	.	ID=gene7726;Dbxref=GeneID:1103101;Name=SC10F4.36c;gbkey=Gene;gene=SC10F4.36c;gene_biotype=protein_coding;gene_synonym=SC10F4.36c;locus_tag=SCO7663
NC_003888.3	RefSeq	CDS	8489928	8490212	.	-	0	ID=cds7591;Parent=gene7726;Dbxref=Genbank:NP_631703.1,GeneID:1103101;Name=NP_631703.1;Note=SC10F4.36c%2C conserved hypothetical protein%2C len: 94 aa%3B similar to TR:O05862 (EMBL:Z95120) Mycobacterium tuberculosis hypothetical 11.0 kDa protein MTCY07D11.22c%2C 101 aa%3B fasta scores: opt: 180 z-score: 238.5 E(): 9.5e-06%3B 34.8%25 identity in 92 aa overlap;gbkey=CDS;gene=SC10F4.36c;product=hypothetical protein;protein_id=NP_631703.1;transl_table=11
NC_003888.3	RefSeq	gene	8490209	8490745	.	-	.	ID=gene7727;Dbxref=GeneID:1103102;Name=SC10F4.37c;gbkey=Gene;gene=SC10F4.37c;gene_biotype=protein_coding;gene_synonym=SC10F4.37c;locus_tag=SCO7664
NC_003888.3	RefSeq	CDS	8490209	8490745	.	-	0	ID=cds7592;Parent=gene7727;Dbxref=Genbank:NP_631704.1,GeneID:1103102;Name=NP_631704.1;Note=SC10F4.37c%2C conserved hypothetical protein%2C len: 178 aa%3B similar to TR:Q9Y9P2 (EMBL:AP000064) Aeropyrum pernix hypothetical 20.8 kDa protein APE2246%2C 188 aa%3B fasta scores: opt: 318 z-score: 401.6 E(): 7.8e-15%3B 35.7%25 identity in 157 aa overlap;gbkey=CDS;gene=SC10F4.37c;product=hypothetical protein;protein_id=NP_631704.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8490218	8490221	.	-	.	ID=id9939;Dbxref=GeneID:1103102;gbkey=RBS;gene=SC10F4.37c
NC_003888.3	RefSeq	gene	8490754	8490963	.	-	.	ID=gene7728;Dbxref=GeneID:1103103;Name=SC10F4.38c;gbkey=Gene;gene=SC10F4.38c;gene_biotype=protein_coding;gene_synonym=SC10F4.38c;locus_tag=SCO7665
NC_003888.3	RefSeq	CDS	8490754	8490963	.	-	0	ID=cds7593;Parent=gene7728;Dbxref=Genbank:NP_631705.1,GeneID:1103103;Name=NP_631705.1;Note=SC10F4.38c%2C hypothetical protein%2C len: 69 aa%3B similar to TR:Q9XA80 (EMBL:AL096837) Streptomyces coelicolor hypothetical 9.9 kDa protein SCF43A.35c%2C 88 aa%3B fasta scores: opt: 205 z-score: 310.7 E(): 9.1e-10%3B 52.5%25 identity in 61 aa overlap;gbkey=CDS;gene=SC10F4.38c;product=hypothetical protein;protein_id=NP_631705.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8491142	8491145	.	+	.	ID=id9940;gbkey=RBS
NC_003888.3	RefSeq	gene	8491153	8492100	.	+	.	ID=gene7729;Dbxref=GeneID:1103104;Name=SC10F4.39;gbkey=Gene;gene=SC10F4.39;gene_biotype=protein_coding;gene_synonym=SC10F4.39,SC4C2.01;locus_tag=SCO7666
NC_003888.3	RefSeq	CDS	8491153	8492100	.	+	0	ID=cds7594;Parent=gene7729;Dbxref=Genbank:NP_733741.1,GeneID:1103104;Name=NP_733741.1;Note=SC4C2.01%2C possible zinc-binding oxidoreductase (fragment)%2C len: >133 aa%3B similar to TR:CAC14345 (EMBL:AL445945) Streptomyces coelicolor zinc-binding oxidoreductase 3SCF60.12%2C 313 aa%3B fasta scores: opt: 218 z-score: 267.4 E(): 2.3e-07%3B 37.8%25 identity in 127 aa overlap~SC10F4.39%2C possible zinc-binding oxidoreductase (fragment)%2C len: >218 aa%3B similar to TR:Q9L2A5 (EMBL:AL137242) Streptomyces coelicolor  zinc-binding oxidoreductase SC8F4.21%2C 339 aa%3B fasta scores: opt: 465 z-score: 527.6 E(): 7.5e-22%3B 41.7%25 identity in 211 aa overlap. Contains Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase;gbkey=CDS;gene=SC10F4.39;product=zinc-binding oxidoreductase (fragment);protein_id=NP_733741.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8491195	8491806	.	+	.	ID=id9941;Dbxref=GeneID:1103104;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenases%2C score -5.30%2C E-value 8.7e-07;gbkey=misc_feature;gene=SC10F4.39
NC_003888.3	RefSeq	gene	8492106	8492702	.	+	.	ID=gene7730;Dbxref=GeneID:1103105;Name=SC4C2.02;gbkey=Gene;gene=SC4C2.02;gene_biotype=protein_coding;gene_synonym=SC4C2.02;locus_tag=SCO7667
NC_003888.3	RefSeq	CDS	8492106	8492702	.	+	0	ID=cds7595;Parent=gene7730;Dbxref=Genbank:NP_631706.1,GeneID:1103105;Name=NP_631706.1;Note=SC4C2.02%2C hypothetical protein%2C len: 198 aa%3B similar to TR:Q9RJG7 (EMBL:AL121600) Streptomyces coelicolor hypothetical 26.8 kDa protein SCF76.07%2C 247 aa%3B fasta scores: opt: 283 z-score: 348.2 E(): 7.3e-12%3B 29.1%25 identity in 179 aa overlap. Contains Pfam match to entry PF01966 HD%2C HD domain;gbkey=CDS;gene=SC4C2.02;product=hypothetical protein;protein_id=NP_631706.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8492190	8492510	.	+	.	ID=id9942;Dbxref=GeneID:1103105;Note=Pfam match to entry PF01966 HD%2C HD domain%2C score 15.10%2C E-value 0.045;gbkey=misc_feature;gene=SC4C2.02
NC_003888.3	RefSeq	gene	8492781	8493260	.	+	.	ID=gene7731;Dbxref=GeneID:1103106;Name=SC4C2.03;gbkey=Gene;gene=SC4C2.03;gene_biotype=protein_coding;gene_synonym=SC4C2.03;locus_tag=SCO7668
NC_003888.3	RefSeq	CDS	8492781	8493260	.	+	0	ID=cds7596;Parent=gene7731;Dbxref=Genbank:NP_631707.1,GeneID:1103106;Name=NP_631707.1;Note=SC4C2.03%2C conserved hypothetical protein%2C len: 159 aa%3B similar to TR:O06195 (EMBL:Z95387) Mycobacterium tuberculosis hypothetical 24.2 kDa protein MTCYA10.15c%2C 225 aa%3B fasta scores: opt: 235 z-score: 263.9 E(): 3.6e-07%3B 43.7%25 identity in 103 aa overlap;gbkey=CDS;gene=SC4C2.03;product=hypothetical protein;protein_id=NP_631707.1;transl_table=11
NC_003888.3	RefSeq	gene	8493549	8494580	.	-	.	ID=gene7732;Dbxref=GeneID:1103107;Name=SC4C2.04c;gbkey=Gene;gene=SC4C2.04c;gene_biotype=protein_coding;gene_synonym=SC4C2.04c;locus_tag=SCO7669
NC_003888.3	RefSeq	CDS	8493549	8494580	.	-	0	ID=cds7597;Parent=gene7732;Dbxref=Genbank:NP_631708.1,GeneID:1103107;Name=NP_631708.1;Note=SC4C2.04c%2C possible oxidoreductase%2C len: 343 aa%3B similar to TR:O06538 (EMBL:Z95584) Mycobacterium tuberculosis hypothetical 36.3 kDa protein MTCI65.05c%2C 338 aa%3B fasta scores: opt: 1020 z-score: 1087.7 E(): 0%3B 50.7%25 identity in 339 aa overlap. Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase;gbkey=CDS;gene=SC4C2.04c;product=oxidoreductase;protein_id=NP_631708.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8493654	8494178	.	-	.	ID=id9943;Dbxref=GeneID:1103107;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 13.40%2C E-value 5.8e-06;gbkey=misc_feature;gene=SC4C2.04c
NC_003888.3	RefSeq	gene	8494577	8495092	.	-	.	ID=gene7733;Dbxref=GeneID:1103108;Name=SC4C2.05c;gbkey=Gene;gene=SC4C2.05c;gene_biotype=protein_coding;gene_synonym=SC4C2.05c;locus_tag=SCO7670
NC_003888.3	RefSeq	CDS	8494577	8495092	.	-	0	ID=cds7598;Parent=gene7733;Dbxref=Genbank:NP_631709.1,GeneID:1103108;Name=NP_631709.1;Note=SC4C2.05c%2C conserved hypothetical protein%2C len: 171 aa%3B similar to TR:O06539 (EMBL:Z95584) Mycobacterium tuberculosis hypothetical 19.0 kDa protein MTCI65.06c%2C 166 aa%3B fasta scores: opt: 697 z-score: 858.3 E(): 0%3B 62.4%25 identity in 165 aa overlap;gbkey=CDS;gene=SC4C2.05c;product=hypothetical protein;protein_id=NP_631709.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8495098	8495103	.	-	.	ID=id9944;gbkey=RBS
NC_003888.3	RefSeq	gene	8495102	8496340	.	-	.	ID=gene7734;Dbxref=GeneID:1103109;Name=SC4C2.06c;gbkey=Gene;gene=SC4C2.06c;gene_biotype=protein_coding;gene_synonym=SC4C2.06c;locus_tag=SCO7671
NC_003888.3	RefSeq	CDS	8495102	8496340	.	-	0	ID=cds7599;Parent=gene7734;Dbxref=Genbank:NP_631710.1,GeneID:1103109;Name=NP_631710.1;Note=SC4C2.06c%2C possible transferase%2C len: 412 aa%3B similar to SW:BCSA_BACSU (EMBL:L77246) Bacillus subtilis chalcone synthase (EC 2.3.1.74) BcsA%2C 365 aa%3B fasta scores: opt: 353 z-score: 334.4 E(): 4.3e-11%3B 31.0%25 identity in 339 aa overlap. Contains 2x Pfam matches to entry PF00195 Chal_stil_synt%2C Chalcone and stilbene synthases and match to Prosite entry PS00196 Type-1 copper (blue) proteins signature. Also contains 9x degenerate repeat: GS;gbkey=CDS;gene=SC4C2.06c;product=transferase;protein_id=NP_631710.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8495108	8495527	.	-	.	ID=id9945;Dbxref=GeneID:1103109;Note=Pfam match to entry PF00195 Chal_stil_synt%2C Chalcone and stilbene synthases%2C score 76.60%2C E-value 1.1e-21;gbkey=misc_feature;gene=SC4C2.06c
NC_003888.3	RefSeq	sequence_feature	8495558	8495611	.	-	.	ID=id9946;Dbxref=GeneID:1103109;Note=9x degenerate repeat translated in SC4C2.06c;gbkey=misc_feature;gene=SC4C2.06c
NC_003888.3	RefSeq	sequence_feature	8495654	8496010	.	-	.	ID=id9947;Dbxref=GeneID:1103109;Note=Pfam match to entry PF00195 Chal_stil_synt%2C Chalcone and stilbene synthases%2C score 70.30%2C E-value 7.7e-20;gbkey=misc_feature;gene=SC4C2.06c
NC_003888.3	RefSeq	sequence_feature	8496191	8496232	.	-	.	ID=id9948;Dbxref=GeneID:1103109;Note=PS00196 Type-1 copper (blue) proteins signature;gbkey=misc_feature;gene=SC4C2.06c
NC_003888.3	RefSeq	ribosome_entry_site	8496346	8496349	.	-	.	ID=id9949;gbkey=RBS
NC_003888.3	RefSeq	gene	8496377	8497237	.	+	.	ID=gene7735;Dbxref=GeneID:1103110;Name=SC4C2.07;gbkey=Gene;gene=SC4C2.07;gene_biotype=protein_coding;gene_synonym=SC4C2.07;locus_tag=SCO7672
NC_003888.3	RefSeq	CDS	8496377	8497237	.	+	0	ID=cds7600;Parent=gene7735;Dbxref=Genbank:NP_631711.1,GeneID:1103110;Name=NP_631711.1;Note=SC4C2.07%2C possible integral membrane protein%2C len: 286 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4C2.07;product=hypothetical protein;protein_id=NP_631711.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8496719	8496751	.	+	.	ID=id9950;Dbxref=GeneID:1103110;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2;gbkey=misc_feature;gene=SC4C2.07
NC_003888.3	RefSeq	ribosome_entry_site	8497413	8497417	.	+	.	ID=id9951;gbkey=RBS
NC_003888.3	RefSeq	gene	8497424	8497978	.	+	.	ID=gene7736;Dbxref=GeneID:1103111;Name=SC4C2.08;gbkey=Gene;gene=SC4C2.08;gene_biotype=protein_coding;gene_synonym=SC4C2.08;locus_tag=SCO7673
NC_003888.3	RefSeq	CDS	8497424	8497978	.	+	0	ID=cds7601;Parent=gene7736;Dbxref=Genbank:NP_631712.1,GeneID:1103111;Name=NP_631712.1;Note=SC4C2.08%2C possible lipoprotein%2C len: 184 aa%3B similar to TR:Q9RCY0 (EMBL:AL133469) Streptomyces coelicolor lipoprotein SCM10.18c%2C 317 aa%3B fasta scores: opt: 343 z-score: 375.0 E(): 2.4e-13%3B 36.2%25 identity in 174 aa overlap. Contains correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4C2.08;product=lipoprotein;protein_id=NP_631712.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8497460	8497492	.	+	.	ID=id9952;Dbxref=GeneID:1103111;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4C2.08
NC_003888.3	RefSeq	ribosome_entry_site	8498008	8498011	.	+	.	ID=id9953;gbkey=RBS
NC_003888.3	RefSeq	gene	8498017	8498415	.	+	.	ID=gene7737;Dbxref=GeneID:1103112;Name=SC4C2.09;gbkey=Gene;gene=SC4C2.09;gene_biotype=protein_coding;gene_synonym=SC4C2.09;locus_tag=SCO7674
NC_003888.3	RefSeq	CDS	8498017	8498415	.	+	0	ID=cds7602;Parent=gene7737;Dbxref=Genbank:NP_631713.1,GeneID:1103112;Name=NP_631713.1;Note=SC4C2.09%2C possible  metal-binding protein%2C len: 132 aa%3B similar to SW:AMCY_METEX (EMBL:M57963) Methylobacterium extorquens amicyanin-alpha precursor MauC%2C 119 aa%3B fasta scores: opt: 165 z-score: 185.2 E(): 0.0088%3B 29.8%25 identity in 121 aa overlap. Contains Pfam match to entry PF00127 copper-bind%2C Copper binding proteins%2C plastocyanin/azurin family and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site and match to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4C2.09;product=metal-binding protein;protein_id=NP_631713.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8498065	8498097	.	+	.	ID=id9954;Dbxref=GeneID:1103112;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4C2.09
NC_003888.3	RefSeq	sequence_feature	8498155	8498412	.	+	.	ID=id9955;Dbxref=GeneID:1103112;Note=Pfam match to entry PF00127 copper-bind%2C Copper binding proteins%2C plastocyanin/azurin family%2C score 31.70%2C E-value 1.2e-07;gbkey=misc_feature;gene=SC4C2.09
NC_003888.3	RefSeq	sequence_feature	8498302	8498325	.	+	.	ID=id9956;Dbxref=GeneID:1103112;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4C2.09
NC_003888.3	RefSeq	gene	8498412	8498906	.	+	.	ID=gene7738;Dbxref=GeneID:1103113;Name=SC4C2.10;gbkey=Gene;gene=SC4C2.10;gene_biotype=protein_coding;gene_synonym=SC4C2.10;locus_tag=SCO7675
NC_003888.3	RefSeq	CDS	8498412	8498906	.	+	0	ID=cds7603;Parent=gene7738;Dbxref=Genbank:NP_631714.1,GeneID:1103113;Name=NP_631714.1;Note=SC4C2.10%2C possible integral membrane protein%2C len: 164 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4C2.10;product=hypothetical protein;protein_id=NP_631714.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8499049	8499053	.	+	.	ID=id9957;gbkey=RBS
NC_003888.3	RefSeq	gene	8499061	8499282	.	+	.	ID=gene7739;Dbxref=GeneID:1103114;Name=SC4C2.11;gbkey=Gene;gene=SC4C2.11;gene_biotype=protein_coding;gene_synonym=SC4C2.11;locus_tag=SCO7676
NC_003888.3	RefSeq	CDS	8499061	8499282	.	+	0	ID=cds7604;Parent=gene7739;Dbxref=Genbank:NP_631715.1,GeneID:1103114;Name=NP_631715.1;Note=SC4C2.11%2C probable ferredoxin%2C len: 73 aa%3B similar to SW:FER2_STRGO (EMBL:M32239) Streptomyces griseolus ferredoxin 2 SubB%2C 64 aa%3B fasta scores: opt: 236 z-score: 326.6 E(): 1.2e-10%3B 55.7%25 identity in 61 aa overlap;gbkey=CDS;gene=SC4C2.11;product=ferredoxin;protein_id=NP_631715.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8499382	8499387	.	+	.	ID=id9958;gbkey=RBS
NC_003888.3	RefSeq	gene	8499392	8500978	.	+	.	ID=gene7740;Dbxref=GeneID:1103115;Name=SC4C2.12;gbkey=Gene;gene=SC4C2.12;gene_biotype=protein_coding;gene_synonym=SC4C2.12;locus_tag=SCO7677
NC_003888.3	RefSeq	CDS	8499392	8500978	.	+	0	ID=cds7605;Parent=gene7740;Dbxref=Genbank:NP_631716.1,GeneID:1103115;Name=NP_631716.1;Note=SC4C2.12%2C possible  solute-binding protein%2C len: 528 aa%3B similar to TR:P96429 (EMBL:Z79692) Sinorhizobium meliloti periplasmic binding protein ORF23%2C 537 aa%3B fasta scores: opt: 644 z-score: 679.5 E(): 2.6e-30%3B 28.8%25 identity in 525 aa overlap. Contains Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5 and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC4C2.12;product=solute-binding protein;protein_id=NP_631716.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8499452	8499484	.	+	.	ID=id9959;Dbxref=GeneID:1103115;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature;gene=SC4C2.12
NC_003888.3	RefSeq	sequence_feature	8500022	8500597	.	+	.	ID=id9960;Dbxref=GeneID:1103115;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 45.30%2C E-value 7.4e-12;gbkey=misc_feature;gene=SC4C2.12
NC_003888.3	RefSeq	gene	8500975	8501925	.	+	.	ID=gene7741;Dbxref=GeneID:1103116;Name=SC4C2.13;gbkey=Gene;gene=SC4C2.13;gene_biotype=protein_coding;gene_synonym=SC4C2.13;locus_tag=SCO7678
NC_003888.3	RefSeq	CDS	8500975	8501925	.	+	0	ID=cds7606;Parent=gene7741;Dbxref=Genbank:NP_631717.1,GeneID:1103116;Name=NP_631717.1;Note=SC4C2.13%2C possible metal transport integral membrane protein%2C len: 316 aa%3B similar to SW:NIKB_ECOLI (EMBL:X73143) Escherichia coli nickel transport system permease NikB%2C 314 aa%3B fasta scores: opt: 490 z-score: 547.6 E(): 5.8e-23%3B 30.4%25 identity in 313 aa overlap. Contains Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component. Also contains possible hydrophobic membrane spanning regions and possible N-terminal signal peptide sequence;gbkey=CDS;gene=SC4C2.13;product=metal transport integral membrane protein;protein_id=NP_631717.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8501587	8501802	.	+	.	ID=id9961;Dbxref=GeneID:1103116;Note=Pfam match to entry PF00528 BPD_transp%2C Binding-protein-dependent transport systems inner membrane component%2C score 17.40%2C E-value 0.06;gbkey=misc_feature;gene=SC4C2.13
NC_003888.3	RefSeq	ribosome_entry_site	8501907	8501911	.	+	.	ID=id9962;Dbxref=GeneID:1103116;gbkey=RBS;gene=SC4C2.13
NC_003888.3	RefSeq	gene	8501922	8502776	.	+	.	ID=gene7742;Dbxref=GeneID:1103117;Name=SC4C2.14;gbkey=Gene;gene=SC4C2.14;gene_biotype=protein_coding;gene_synonym=SC4C2.14;locus_tag=SCO7679
NC_003888.3	RefSeq	CDS	8501922	8502776	.	+	0	ID=cds7607;Parent=gene7742;Dbxref=Genbank:NP_631718.1,GeneID:1103117;Name=NP_631718.1;Note=SC4C2.14%2C possible transport system integral membrane protein%2C len: 284 aa%3B similar to SW:Y4TQ_RHISN (EMBL:Z68203) Rhizobium sp. probable peptide ABC transporter permease Y4tQ%2C 291 aa%3B fasta scores: opt: 433 z-score: 466.4 E(): 1.9e-18%3B 33.2%25 identity in 277 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4C2.14;product=transport system integral membrane protein;protein_id=NP_631718.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8502765	8502768	.	+	.	ID=id9963;Dbxref=GeneID:1103117;gbkey=RBS;gene=SC4C2.14
NC_003888.3	RefSeq	gene	8502773	8504398	.	+	.	ID=gene7743;Dbxref=GeneID:1103118;Name=SC4C2.15;gbkey=Gene;gene=SC4C2.15;gene_biotype=protein_coding;gene_synonym=SC4C2.15;locus_tag=SCO7680
NC_003888.3	RefSeq	CDS	8502773	8504398	.	+	0	ID=cds7608;Parent=gene7743;Dbxref=Genbank:NP_631719.1,GeneID:1103118;Name=NP_631719.1;Note=SC4C2.15%2C possible ABC transporter ATP-binding protein%2C len: 541 aa%3B similar to TR:AAG05449 (EMBL:AE004632) Pseudomonas aeruginosa probable ATP-binding component of ABC transporter PA2061%2C 536 aa%3B fasta scores: opt: 861 z-score: 716.8 E(): 2.2e-32%3B 37.4%25 identity in 522 aa overlap. Contains 2x Pfam matches to entry PF00005 ABC_tran%2C ABC transporter and 2x matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and 2x to PS00211 ABC transporters family signature;gbkey=CDS;gene=SC4C2.15;product=ABC transporter ATP-binding protein;protein_id=NP_631719.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8502899	8503489	.	+	.	ID=id9964;Dbxref=GeneID:1103118;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 143.80%2C E-value 3e-39;gbkey=misc_feature;gene=SC4C2.15
NC_003888.3	RefSeq	sequence_feature	8502920	8502943	.	+	.	ID=id9965;Dbxref=GeneID:1103118;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4C2.15
NC_003888.3	RefSeq	sequence_feature	8503259	8503303	.	+	.	ID=id9966;Dbxref=GeneID:1103118;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC4C2.15
NC_003888.3	RefSeq	sequence_feature	8503466	8503718	.	+	.	ID=id9967;Dbxref=GeneID:1103118;Note=High G+C content region (80.63%25). Also high content in alanine%2C glycine and proline amino acid residues;gbkey=misc_feature;gene=SC4C2.15
NC_003888.3	RefSeq	sequence_feature	8503733	8504278	.	+	.	ID=id9968;Dbxref=GeneID:1103118;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 171.90%2C E-value 1e-47;gbkey=misc_feature;gene=SC4C2.15
NC_003888.3	RefSeq	sequence_feature	8503754	8503777	.	+	.	ID=id9969;Dbxref=GeneID:1103118;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4C2.15
NC_003888.3	RefSeq	sequence_feature	8504048	8504092	.	+	.	ID=id9970;Dbxref=GeneID:1103118;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC4C2.15
NC_003888.3	RefSeq	gene	8504461	8506122	.	-	.	ID=gene7744;Dbxref=GeneID:1103119;Name=SC4C2.16c;gbkey=Gene;gene=SC4C2.16c;gene_biotype=protein_coding;gene_synonym=SC4C2.16c;locus_tag=SCO7681
NC_003888.3	RefSeq	CDS	8504461	8506122	.	-	0	ID=cds7609;Parent=gene7744;Dbxref=Genbank:NP_631720.1,GeneID:1103119;Name=NP_631720.1;Note=SC4C2.16c%2C probable AMP-binding ligase%2C len: 553 aa%3B similar to SW:DHBE_BACSU (EMBL:U26444) Bacillus subtilis 2%2C3-dihydroxybenzoate-AMP ligase (EC 6.3.2.-) DhbE%2C 539 aa%3B fasta scores: opt: 1324 z-score: 1411.8 E(): 0%3B 51.6%25 identity in 539 aa overlap. Contains Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme and match to Prosite entry PS00455  AMP-binding domain signature;gbkey=CDS;gene=SC4C2.16c;product=2%2C3-dihydroxybenzoate-AMP ligase;protein_id=NP_631720.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8504680	8505969	.	-	.	ID=id9971;Dbxref=GeneID:1103119;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 58.70%2C E-value 1.1e-18;gbkey=misc_feature;gene=SC4C2.16c
NC_003888.3	RefSeq	sequence_feature	8505466	8505501	.	-	.	ID=id9972;Dbxref=GeneID:1103119;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC4C2.16c
NC_003888.3	RefSeq	ribosome_entry_site	8506131	8506134	.	-	.	ID=id9973;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8506271	8506274	.	+	.	ID=id9974;gbkey=RBS
NC_003888.3	RefSeq	gene	8506283	8512972	.	+	.	ID=gene7745;Dbxref=GeneID:1103120;Name=SC4C2.17;gbkey=Gene;gene=SC4C2.17;gene_biotype=protein_coding;gene_synonym=SC4C2.17;locus_tag=SCO7682
NC_003888.3	RefSeq	CDS	8506283	8512972	.	+	0	ID=cds7610;Parent=gene7745;Dbxref=Genbank:NP_631721.1,GeneID:1103120;Name=NP_631721.1;Note=SC4C2.17%2C probable non-ribosomal peptide synthase%2C len: 2229 aa%3B similar to TR:AAG02364 (EMBL:AF210249) Streptomyces verticillus peptide synthetase NRPS2-1 BlmIV%2C 2626 aa%3B fasta scores: opt: 2485 z-score: 2429.3 E(): 0%3B 37.9%25 identity in 2203 aa overlap%2C to SW:HMP2_YEREN (EMBL:L18881) Yersinia enterocolitica high-molecular-weight protein 2 Irp2%2C 2035 aa%3B fasta scores: opt: 2251 z-score: 2201.3 E(): 0%3B 33.3%25 identity in 2022 aa overlap to TR:CAA18919 (EMBL:AL023496) Streptomyces coelicolor probable peptide synthase SC1A6.21%2C 1407 aa%3B fasta scores: opt: 1764 z-score: 1430.4 E(): 0%3B 40.0%25 identity in 1171 aa overlap and to Streptomyces coelicolor SC4C2.18%2C 1842 aa%3B fasta scores: opt: 1742 z-score: 1410.7 E(): 0%3B 43.0%25 identity in 997 aa overlap. Contains Pfam matches to entries 3x PF00550 pp-binding%2C Phosphopantetheine attachment site%2C 3x PF00668 DUF4%2C Domain of unknown function DUF4%2C 2x PF00501 AMP-binding%2C AMP-binding enzyme and matches to Prosite entries 2x PS00455  AMP-binding domain signature%2C PS00678 Trp-Asp (WD) repeats signature%2C 2x PS00012 Phosphopantetheine attachment site and PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=CDS;gene=SC4C2.17;product=non-ribosomal peptide synthase;protein_id=NP_631721.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8506322	8506519	.	+	.	ID=id9975;Dbxref=GeneID:1103120;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 60.10%2C E-value 5.3e-15;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8506595	8507506	.	+	.	ID=id9976;Dbxref=GeneID:1103120;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function DUF4%2C score 85.30%2C E-value 1.4e-23;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8508062	8509252	.	+	.	ID=id9977;Dbxref=GeneID:1103120;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 446.80%2C E-value 1.8e-130;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8508413	8508448	.	+	.	ID=id9978;Dbxref=GeneID:1103120;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8508533	8508577	.	+	.	ID=id9979;Dbxref=GeneID:1103120;Note=PS00678 Trp-Asp (WD) repeats signature;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8509508	8509633	.	+	.	ID=id9980;Dbxref=GeneID:1103120;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 33.30%2C E-value 1.4e-07;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8509577	8509624	.	+	.	ID=id9981;Dbxref=GeneID:1103120;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8509598	8509684	.	+	.	ID=id9982;Dbxref=GeneID:1103120;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8509775	8510152	.	+	.	ID=id9983;Dbxref=GeneID:1103120;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function DUF4%2C score 45.10%2C E-value 4.8e-12;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8510204	8510689	.	+	.	ID=id9984;Dbxref=GeneID:1103120;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function DUF4%2C score 84.30%2C E-value 2.6e-23;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8511245	8512441	.	+	.	ID=id9985;Dbxref=GeneID:1103120;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 441.70%2C E-value 6.5e-129;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8511587	8511622	.	+	.	ID=id9986;Dbxref=GeneID:1103120;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8512727	8512921	.	+	.	ID=id9987;Dbxref=GeneID:1103120;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 56.40%2C E-value 5.4e-14;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	sequence_feature	8512796	8512843	.	+	.	ID=id9988;Dbxref=GeneID:1103120;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC4C2.17
NC_003888.3	RefSeq	ribosome_entry_site	8512961	8512964	.	+	.	ID=id9989;Dbxref=GeneID:1103120;gbkey=RBS;gene=SC4C2.17
NC_003888.3	RefSeq	gene	8512969	8518497	.	+	.	ID=gene7746;Dbxref=GeneID:1103121;Name=SC4C2.18;gbkey=Gene;gene=SC4C2.18;gene_biotype=protein_coding;gene_synonym=SC4C2.18;locus_tag=SCO7683
NC_003888.3	RefSeq	CDS	8512969	8518497	.	+	0	ID=cds7611;Parent=gene7746;Dbxref=Genbank:NP_631722.1,GeneID:1103121;Name=NP_631722.1;Note=SC4C2.18%2C probable non-ribosomal peptide synthase%2C len: 1842 aa%3B similar to C-terminal domain of TR:AAG02364 (EMBL:AF210249) Streptomyces verticillus peptide synthetase NRPS2-1 BlmIV%2C 2626 aa%3B fasta scores: opt: 2514 z-score: 2613.8 E(): 0%3B 40.7%25 identity in 1287 aa overlap%2C to TR:Q9RFM7 (EMBL:AF184622) Pseudomonas aeruginosa pyochelin synthetase PchF%2C 1809 aa%3B fasta scores: opt: 2279 z-score: 2370.9 E(): 0%3B 39.7%25 identity in 1887 aa overlap%2C to TR:CAA18919 (EMBL:AL023496) Streptomyces coelicolor probable peptide synthase SC1A6.21%2C 1407 aa%3B fasta scores: opt: 1826 z-score: 1476.6 E(): 0%3B 36.7%25 identity in 1315 aa overlap and to C-terminal domain of Streptomyces coelicolor SC4C2.17%2C 2229 aa%3B fasta scores: opt: 1742 z-score: 1405.5 E(): 0%3B 43.0%25 identity in 997 aa overlap. Contains Pfam matches to entries PF00668 DUF4%2C Domain of unknown function DUF4%2C PF00501 AMP-binding%2C AMP-binding enzyme%2C PF00550 pp-binding%2C Phosphopantetheine attachment site and PF00975 Thioesterase%2C Thioesterase domain and matches to Prosite entries PS00455  AMP-binding domain signature and PS00012 Phosphopantetheine attachment site;gbkey=CDS;gene=SC4C2.18;product=non-ribosomal peptide synthase;protein_id=NP_631722.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8513164	8514105	.	+	.	ID=id9990;Dbxref=GeneID:1103121;Note=Pfam match to entry PF00668 DUF4%2C Domain of unknown function DUF4%2C score 142.00%2C E-value 7.1e-40;gbkey=misc_feature;gene=SC4C2.18
NC_003888.3	RefSeq	sequence_feature	8514658	8515866	.	+	.	ID=id9991;Dbxref=GeneID:1103121;Note=Pfam match to entry PF00501 AMP-binding%2C AMP-binding enzyme%2C score 479.90%2C E-value 2.1e-140;gbkey=misc_feature;gene=SC4C2.18
NC_003888.3	RefSeq	sequence_feature	8515015	8515050	.	+	.	ID=id9992;Dbxref=GeneID:1103121;Note=PS00455  AMP-binding domain signature;gbkey=misc_feature;gene=SC4C2.18
NC_003888.3	RefSeq	sequence_feature	8517292	8517504	.	+	.	ID=id9993;Dbxref=GeneID:1103121;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 42.50%2C E-value 3.9e-10;gbkey=misc_feature;gene=SC4C2.18
NC_003888.3	RefSeq	sequence_feature	8517361	8517408	.	+	.	ID=id9994;Dbxref=GeneID:1103121;Note=PS00012 Phosphopantetheine attachment site;gbkey=misc_feature;gene=SC4C2.18
NC_003888.3	RefSeq	sequence_feature	8517595	8518476	.	+	.	ID=id9995;Dbxref=GeneID:1103121;Note=Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain%2C score 25.90%2C E-value 0.00019;gbkey=misc_feature;gene=SC4C2.18
NC_003888.3	RefSeq	gene	8518494	8519645	.	+	.	ID=gene7747;Dbxref=GeneID:1103122;Name=SC4C2.19;gbkey=Gene;gene=SC4C2.19;gene_biotype=protein_coding;gene_synonym=SC4C2.19;locus_tag=SCO7684
NC_003888.3	RefSeq	CDS	8518494	8519645	.	+	0	ID=cds7612;Parent=gene7747;Dbxref=Genbank:NP_631723.1,GeneID:1103122;Name=NP_631723.1;Note=SC4C2.19%2C conserved hypothetical protein%2C len: 383 aa%3B similar to TR:Q46024 (EMBL:U02634) Corynebacterium diphtheriae DtxR/iron regulated protein 2 Irp2%2C 369 aa%3B fasta scores: opt: 241 z-score: 271.1 E(): 1.5e-07%3B 29.6%25 identity in 382 aa overlap;gbkey=CDS;gene=SC4C2.19;product=hypothetical protein;protein_id=NP_631723.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8519631	8519634	.	+	.	ID=id9996;Dbxref=GeneID:1103122;gbkey=RBS;gene=SC4C2.19
NC_003888.3	RefSeq	gene	8519642	8521675	.	+	.	ID=gene7748;Dbxref=GeneID:1103123;Name=SC4C2.20;gbkey=Gene;gene=SC4C2.20;gene_biotype=protein_coding;gene_synonym=SC4C2.20;locus_tag=SCO7685
NC_003888.3	RefSeq	CDS	8519642	8521675	.	+	0	ID=cds7613;Parent=gene7748;Dbxref=Genbank:NP_631724.1,GeneID:1103123;Name=NP_631724.1;Note=SC4C2.20%2C conserved hypothetical protein%2C len: 677 aa%3B similar to TR:Q9Z602 (EMBL:AF116557) Pseudomonas aeruginosa protein necessary for the formation of the siderophore pyochelin PchG%2C 349 aa%3B fasta scores: opt: 559 z-score: 589.4 E(): 2.7e-25%3B 36.6%25 identity in 350 aa overlap and to Streptomyces coelicolor hypothetical protein SC4C2.23%2C 242 aa%3B fasta scores: opt: 705 z-score: 579.4 E(): 1.3e-26%3B 50.2%25 identity in 243 aa overlap;gbkey=CDS;gene=SC4C2.20;product=hypothetical protein;protein_id=NP_631724.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8521469	8521543	.	+	.	ID=id9997;Dbxref=GeneID:1103123;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1;gbkey=misc_feature;gene=SC4C2.20
NC_003888.3	RefSeq	ribosome_entry_site	8521674	8521677	.	+	.	ID=id9998;gbkey=RBS
NC_003888.3	RefSeq	gene	8521684	8522919	.	+	.	ID=gene7749;Dbxref=GeneID:1103124;Name=SC4C2.21;gbkey=Gene;gene=SC4C2.21;gene_biotype=protein_coding;gene_synonym=SC4C2.21;locus_tag=SCO7686
NC_003888.3	RefSeq	CDS	8521684	8522919	.	+	0	ID=cds7614;Parent=gene7749;Dbxref=Genbank:NP_631725.1,GeneID:1103124;Name=NP_631725.1;Note=SC4C2.21%2C probable cytochrome P450%2C len: 411 aa%3B similar to SW:CPXE_STRGO (EMBL:M32238) Streptomyces griseolus cytochrome P450-SU1 SuaC%2C405 aa%3B fasta scores: opt: 1113 z-score: 1179.8 E(): 0%3B 45.5%25 identity in 407 aa overlap. Contains Pfam match to entry PF00067 p450%2C Cytochrome P450 and match to Prosite entry PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=CDS;gene=SC4C2.21;product=cytochrome P450;protein_id=NP_631725.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8521810	8522844	.	+	.	ID=id9999;Dbxref=GeneID:1103124;Note=Pfam match to entry PF00067 p450%2C Cytochrome P450%2C score 215.10%2C E-value 1.1e-60;gbkey=misc_feature;gene=SC4C2.21
NC_003888.3	RefSeq	sequence_feature	8522740	8522769	.	+	.	ID=id10000;Dbxref=GeneID:1103124;Note=PS00086 Cytochrome P450 cysteine heme-iron ligand signature;gbkey=misc_feature;gene=SC4C2.21
NC_003888.3	RefSeq	gene	8522916	8523749	.	+	.	ID=gene7750;Dbxref=GeneID:1103125;Name=SC4C2.22;gbkey=Gene;gene=SC4C2.22;gene_biotype=protein_coding;gene_synonym=SC4C2.22;locus_tag=SCO7687
NC_003888.3	RefSeq	CDS	8522916	8523749	.	+	0	ID=cds7615;Parent=gene7750;Dbxref=Genbank:NP_631726.1,GeneID:1103125;Name=NP_631726.1;Note=SC4C2.22%2C probable thioesterase%2C len: 277 aa%3B similar to SW:PABT_STRGR (EMBL:M93058) Streptomyces griseus probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)%2C 361 aa%3B fasta scores: opt: 638 z-score: 760.5 E(): 0%3B 40.4%25 identity in 277 aa overlap. Contains Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain;gbkey=CDS;gene=SC4C2.22;product=thioesterase;protein_id=NP_631726.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8523009	8523710	.	+	.	ID=id10001;Dbxref=GeneID:1103125;Note=Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain%2C score 210.40%2C E-value 2.8e-59;gbkey=misc_feature;gene=SC4C2.22
NC_003888.3	RefSeq	ribosome_entry_site	8523749	8523753	.	+	.	ID=id10002;gbkey=RBS
NC_003888.3	RefSeq	gene	8523760	8524488	.	+	.	ID=gene7751;Dbxref=GeneID:1103126;Name=SC4C2.23;gbkey=Gene;gene=SC4C2.23;gene_biotype=protein_coding;gene_synonym=SC4C2.23;locus_tag=SCO7688
NC_003888.3	RefSeq	CDS	8523760	8524488	.	+	0	ID=cds7616;Parent=gene7751;Dbxref=Genbank:NP_631727.1,GeneID:1103126;Name=NP_631727.1;Note=SC4C2.23%2C hypothetical protein%2C len: 242 aa%3B similar to TR:CAC04224 (EMBL:AL391515) Streptomyces coelicolor hypothetical 27.9 kDa protein SC4B10.19c%2C 254 aa%3B fasta scores: opt: 222 z-score: 264.0 E(): 3.6e-07%3B 31.8%25 identity in 214 aa overlap and to Streptomyces coelicolor hypothetical protein SC4C2.20%2C 677 aa%3B fasta scores: opt: 705 z-score: 683.1 E(): 2.2e-32%3B 49.8%25 identity in 243 aa overlap;gbkey=CDS;gene=SC4C2.23;product=hypothetical protein;protein_id=NP_631727.1;transl_table=11
NC_003888.3	RefSeq	gene	8524521	8526347	.	+	.	ID=gene7752;Dbxref=GeneID:1103127;Name=SC4C2.24;gbkey=Gene;gene=SC4C2.24;gene_biotype=protein_coding;gene_synonym=SC4C2.24;locus_tag=SCO7689
NC_003888.3	RefSeq	CDS	8524521	8526347	.	+	0	ID=cds7617;Parent=gene7752;Dbxref=Genbank:NP_631728.1,GeneID:1103127;Name=NP_631728.1;Note=SC4C2.24%2C probable ABC transporter ATP-binding protein%2C len: 551 aa%3B similar to C-terminal region of SW:YD48_MYCTU (EMBL:Z75555) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1348%2C 859 aa%3B fasta scores: opt: 1313 z-score: 1377.6 E(): 0%3B 43.8%25 identity in 548 aa overlap. Contains Pfam matches to entries PF00664 ABC_membrane%2C ABC transporter transmembrane region and PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4C2.24;product=ABC transporter ATP-binding protein;protein_id=NP_631728.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8524530	8524574	.	+	.	ID=id10003;Dbxref=GeneID:1103127;Note=3x degenerate repeat translated in SC4C2.24;gbkey=misc_feature;gene=SC4C2.24
NC_003888.3	RefSeq	sequence_feature	8524692	8525474	.	+	.	ID=id10004;Dbxref=GeneID:1103127;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 20.40%2C E-value 0.00066;gbkey=misc_feature;gene=SC4C2.24
NC_003888.3	RefSeq	sequence_feature	8525679	8526230	.	+	.	ID=id10005;Dbxref=GeneID:1103127;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 186.20%2C E-value 5.2e-52;gbkey=misc_feature;gene=SC4C2.24
NC_003888.3	RefSeq	sequence_feature	8525700	8525723	.	+	.	ID=id10006;Dbxref=GeneID:1103127;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4C2.24
NC_003888.3	RefSeq	sequence_feature	8526009	8526053	.	+	.	ID=id10007;Dbxref=GeneID:1103127;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC4C2.24
NC_003888.3	RefSeq	gene	8526344	8528107	.	+	.	ID=gene7753;Dbxref=GeneID:1103128;Name=SC4C2.25;gbkey=Gene;gene=SC4C2.25;gene_biotype=protein_coding;gene_synonym=SC4C2.25;locus_tag=SCO7690
NC_003888.3	RefSeq	CDS	8526344	8528107	.	+	0	ID=cds7618;Parent=gene7753;Dbxref=Genbank:NP_631729.1,GeneID:1103128;Name=NP_631729.1;Note=SC4C2.25%2C probable ABC transporter ATP-binding protein%2C len: 587 aa%3B similar to SW:YD49_MYCTU (EMBL:Z75555) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1349%2C 579 aa%3B fasta scores: opt: 1144 z-score: 1191.3 E(): 0%3B 36.8%25 identity in 590 aa overlap. Contains Pfam matches to entries PF00664 ABC_membrane%2C ABC transporter transmembrane region and PF00005 ABC_tran%2C ABC transporter and matches to Prosite entries PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature%2C PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC4C2.25;product=ABC transporter ATP-binding protein;protein_id=NP_631729.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8526383	8527204	.	+	.	ID=id10008;Dbxref=GeneID:1103128;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region.%2C score 52.40%2C E-value 9.9e-12;gbkey=misc_feature;gene=SC4C2.25
NC_003888.3	RefSeq	sequence_feature	8526395	8526442	.	+	.	ID=id10009;Dbxref=GeneID:1103128;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature;gbkey=misc_feature;gene=SC4C2.25
NC_003888.3	RefSeq	sequence_feature	8527436	8527990	.	+	.	ID=id10010;Dbxref=GeneID:1103128;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 174.40%2C E-value 1.9e-48;gbkey=misc_feature;gene=SC4C2.25
NC_003888.3	RefSeq	sequence_feature	8527457	8527480	.	+	.	ID=id10011;Dbxref=GeneID:1103128;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=SC4C2.25
NC_003888.3	RefSeq	sequence_feature	8527769	8527813	.	+	.	ID=id10012;Dbxref=GeneID:1103128;Note=PS00211 ABC transporters family signature;gbkey=misc_feature;gene=SC4C2.25
NC_003888.3	RefSeq	gene	8528166	8529581	.	+	.	ID=gene7754;Dbxref=GeneID:1103129;Name=SC4C2.26;gbkey=Gene;gene=SC4C2.26;gene_biotype=protein_coding;gene_synonym=SC4C2.26;locus_tag=SCO7691
NC_003888.3	RefSeq	CDS	8528166	8529581	.	+	0	ID=cds7619;Parent=gene7754;Dbxref=Genbank:NP_631730.1,GeneID:1103129;Name=NP_631730.1;Note=SC4C2.26%2C possible lyase%2C len: 471 aa%3B C-terminal region similar to C-terminal region of SW:TRPE_HALVO (EMBL:M83788) Halobacterium volcanii anthranilate synthase component I(EC 4.1.3.27) TrpE%2C 523 aa%3B fasta scores: opt: 545 z-score: 624.2 E(): 3.1e-27%3B 38.7%25 identity in 300 aa overlap. Contains Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme;gbkey=CDS;gene=SC4C2.26;product=lyase;protein_id=NP_631730.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8528973	8529563	.	+	.	ID=id10013;Dbxref=GeneID:1103129;Note=Pfam match to entry PF00425 chorismate_bind%2C chorismate binding enzyme%2C score 163.30%2C E-value 1.9e-46;gbkey=misc_feature;gene=SC4C2.26
NC_003888.3	RefSeq	gene	8529736	8530005	.	+	.	ID=gene7755;Dbxref=GeneID:1103130;Name=SC4C2.27;gbkey=Gene;gene=SC4C2.27;gene_biotype=protein_coding;gene_synonym=SC4C2.27;locus_tag=SCO7692
NC_003888.3	RefSeq	CDS	8529736	8530005	.	+	0	ID=cds7620;Parent=gene7755;Dbxref=Genbank:NP_631731.1,GeneID:1103130;Name=NP_631731.1;Note=SC4C2.27%2C unknown%2C len: 89 aa;gbkey=CDS;gene=SC4C2.27;product=hypothetical protein;protein_id=NP_631731.1;transl_table=11
NC_003888.3	RefSeq	gene	8529982	8530953	.	-	.	ID=gene7756;Dbxref=GeneID:1103131;Name=SC1A4.01c;gbkey=Gene;gene=SC1A4.01c;gene_biotype=protein_coding;gene_synonym=SC1A4.01c;locus_tag=SCO7693
NC_003888.3	RefSeq	CDS	8529982	8530953	.	-	0	ID=cds7621;Parent=gene7756;Dbxref=Genbank:NP_631732.1,GeneID:1103131;Name=NP_631732.1;Note=SC1A4.01c%2C probable oxidoreductase%2C len: 323 aa%3B similar to SW:OXIR_STRAT (EMBL:M96551) Streptomyces antibioticus probable oxidoreductase (EC 1.-.-.-)%2C 298 aa%3B fasta scores: opt: 855 z-score: 920.1 E(): 0%3B 49.8%25 identity in 305 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase;gbkey=CDS;gene=SC1A4.01c;product=oxidoreductase;protein_id=NP_631732.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8530273	8530869	.	-	.	ID=id10014;Dbxref=GeneID:1103131;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 91.70%2C E-value 1.4e-23;gbkey=misc_feature;gene=SC1A4.01c
NC_003888.3	RefSeq	gene	8531016	8531588	.	+	.	ID=gene7757;Dbxref=GeneID:1103132;Name=SC1A4.02;gbkey=Gene;gene=SC1A4.02;gene_biotype=protein_coding;gene_synonym=SC1A4.02;locus_tag=SCO7694
NC_003888.3	RefSeq	CDS	8531016	8531588	.	+	0	ID=cds7622;Parent=gene7757;Dbxref=Genbank:NP_631733.1,GeneID:1103132;Name=NP_631733.1;Note=SC1A4.02%2C probable tetR-family transcriptional regulator%2C len: 190 aa%3B similar to TR:Q9PBQ5 (EMBL:AE004024) Xylella fastidiosa transcriptional regulator (AcrR family) XF2085%2C 205 aa%3B fasta scores: opt: 170 z-score: 215.3 E(): 0.00019%3B 30.8%25 identity in 117 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and possible helix-turn-helix motif at residues 38..59 (+4.46 SD);gbkey=CDS;gene=SC1A4.02;product=TetR family transcriptional regulator;protein_id=NP_631733.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8531079	8531219	.	+	.	ID=id10015;Dbxref=GeneID:1103132;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 60.60%2C E-value 3.4e-14;gbkey=misc_feature;gene=SC1A4.02
NC_003888.3	RefSeq	gene	8531641	8532009	.	-	.	ID=gene7758;Dbxref=GeneID:1103133;Name=SC1A4.03c;gbkey=Gene;gene=SC1A4.03c;gene_biotype=protein_coding;gene_synonym=SC1A4.03c;locus_tag=SCO7695
NC_003888.3	RefSeq	CDS	8531641	8532009	.	-	0	ID=cds7623;Parent=gene7758;Dbxref=Genbank:NP_631734.1,GeneID:1103133;Name=NP_631734.1;Note=SC1A4.03c%2C hypothetical protein%2C len: 122 aa%3B similar to TR:Q9K3Q6 (EMBL:AL360034) Streptomyces coelicolor conserved hypothetical protein 2SCG4.08%2C 130 aa%3B fasta scores: opt: 140 z-score: 184.4 E(): 0.0098%3B 31.3%25 identity in 112 aa overlap;gbkey=CDS;gene=SC1A4.03c;product=hypothetical protein;protein_id=NP_631734.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8532017	8532022	.	-	.	ID=id10016;gbkey=RBS
NC_003888.3	RefSeq	gene	8532086	8532541	.	+	.	ID=gene7759;Dbxref=GeneID:1103134;Name=SC1A4.04;gbkey=Gene;gene=SC1A4.04;gene_biotype=protein_coding;gene_synonym=SC1A4.04;locus_tag=SCO7696
NC_003888.3	RefSeq	CDS	8532086	8532541	.	+	0	ID=cds7624;Parent=gene7759;Dbxref=Genbank:NP_631735.1,GeneID:1103134;Name=NP_631735.1;Note=SC1A4.04%2C possible marR-family transcriptional regulator%2C len: 151 aa%3B similar to SW:YS87_MYCTU (EMBL:Z74024) Mycobacterium tuberculosis hypothetical transcriptional regulator RV2887%2C 139 aa%3B fasta scores: opt: 354 z-score: 441.2 E(): 4.8e-17%3B 43.0%25 identity in 135 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and possible helix-turn-helix motif at residues 55..76 (+2.75 SD);gbkey=CDS;gene=SC1A4.04;product=MarR family transcriptional regulator;protein_id=NP_631735.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8532197	8532508	.	+	.	ID=id10017;Dbxref=GeneID:1103134;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 62.90%2C E-value 6.9e-15;gbkey=misc_feature;gene=SC1A4.04
NC_003888.3	RefSeq	ribosome_entry_site	8532728	8532733	.	+	.	ID=id10018;gbkey=RBS
NC_003888.3	RefSeq	gene	8532741	8534048	.	+	.	ID=gene7760;Dbxref=GeneID:1103135;Name=SC1A4.05;gbkey=Gene;gene=SC1A4.05;gene_biotype=protein_coding;gene_synonym=SC1A4.05;locus_tag=SCO7697
NC_003888.3	RefSeq	CDS	8532741	8534048	.	+	0	ID=cds7625;Parent=gene7760;Dbxref=Genbank:NP_631736.1,GeneID:1103135;Name=NP_631736.1;Note=SC1A4.05%2C probable  hydrolase%2C len: 435 aa%3B similar to SW:PHYT_BACSU (EMBL:AF015775) Bacillus subtilis 3-phytase precursor (EC 3.1.3.8) Phy%2C 382 aa%3B fasta scores: opt: 203 z-score: 223.6 E(): 6.5e-05%3B 31.0%25 identity in 387 aa overlap. Contains Pfam match to entry PF02333 Phytase. Also contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC1A4.05;product=hydrolase;protein_id=NP_631736.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8532774	8534045	.	+	.	ID=id10019;Dbxref=GeneID:1103135;Note=Pfam match to entry PF02333 Phytase%2C %2C score 75.20%2C E-value 1.3e-18;gbkey=misc_feature;gene=SC1A4.05
NC_003888.3	RefSeq	gene	8534142	8535284	.	-	.	ID=gene7761;Dbxref=GeneID:1103136;Name=SC1A4.06c;gbkey=Gene;gene=SC1A4.06c;gene_biotype=protein_coding;gene_synonym=SC1A4.06c;locus_tag=SCO7698
NC_003888.3	RefSeq	CDS	8534142	8535284	.	-	0	ID=cds7626;Parent=gene7761;Dbxref=Genbank:NP_631737.1,GeneID:1103136;Name=NP_631737.1;Note=SC1A4.06c%2C probable merR-family transcriptional regulator%2C len: 380 aa%3B N-terminal region similar to SW:TIPA_STRLI (EMBL:S64314) Streptomyces lividans transcriptional activator TipA%2C 253 aa%3B fasta scores: opt: 404 z-score: 467.3 E(): 1.7e-18%3B 40.0%25 identity in 185 aa overlap and C-terminal region similar to TR:O87011 (EMBL:U93274) Pseudomonas aeruginosa hypothetical protein YafE%2C 187 aa%3B blastp scores: Score%3D 121 (42.6 bits)%2C Expect%3D 1.6e-05%2C P%3D 1.6e-05%3B Identities%3D 51/144 (35%25)%2C Positives%3D 72/144 (50%25). Contains Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family and possible helix-turn-helix motif at residues 14..35 (+3.15 SD);gbkey=CDS;gene=SC1A4.06c;product=MerR family transcriptional regulator;protein_id=NP_631737.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8535129	8535236	.	-	.	ID=id10020;Dbxref=GeneID:1103136;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 57.30%2C E-value 3.4e-13;gbkey=misc_feature;gene=SC1A4.06c
NC_003888.3	RefSeq	ribosome_entry_site	8535515	8535520	.	+	.	ID=id10021;gbkey=RBS
NC_003888.3	RefSeq	gene	8535532	8536947	.	+	.	ID=gene7762;Dbxref=GeneID:1103137;Name=SC1A4.07;gbkey=Gene;gene=SC1A4.07;gene_biotype=protein_coding;gene_synonym=SC1A4.07;locus_tag=SCO7699
NC_003888.3	RefSeq	CDS	8535532	8536947	.	+	0	ID=cds7627;Parent=gene7762;Dbxref=Genbank:NP_631738.1,GeneID:1103137;Name=NP_631738.1;Note=SC1A4.07%2C possible nucleotide-binding protein%2C len: 471 aa%3B highly similar to TR:Q54255 (EMBL:L76204) Streptomyces griseus sporulation-specific protein p3%2C 470 aa%3B fasta scores: opt: 2382 z-score: 2757.2 E(): 0%3B 75.8%25 identity in 472 aa overlap and to TR:CAC05970 (EMBL:AL391763) Streptomyces coelicolor nucleotide binding protein 2SC7G11.11%2C 468 aa%3B fasta scores: opt: 1972 z-score: 2283.0 E(): 0%3B 63.5%25 identity in 466 aa overlap. Contains Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain;gbkey=CDS;gene=SC1A4.07;product=nucleotide-binding protein;protein_id=NP_631738.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8535865	8536149	.	+	.	ID=id10022;Dbxref=GeneID:1103137;Note=Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain%2C score 58.20%2C E-value 1.7e-13;gbkey=misc_feature;gene=SC1A4.07
NC_003888.3	RefSeq	ribosome_entry_site	8537018	8537023	.	+	.	ID=id10023;gbkey=RBS
NC_003888.3	RefSeq	gene	8537030	8538352	.	+	.	ID=gene7763;Dbxref=GeneID:1103138;Name=SC1A4.08;gbkey=Gene;gene=SC1A4.08;gene_biotype=protein_coding;gene_synonym=SC1A4.08,SCBAC12C8.01;locus_tag=SCO7700
NC_003888.3	RefSeq	CDS	8537030	8538352	.	+	0	ID=cds7628;Parent=gene7763;Dbxref=Genbank:NP_733742.1,GeneID:1103138;Name=NP_733742.1;Note=SCBAC12C8.01%2C possible cyclase%2C len: >137aa: strongly similar to C-terminus of TR:Q9F1V8 (EMBL:AB040071) cyclase from Streptomyces griseus (437 aa) fasta scores%3B opt: 788%2C Z-score: 962.7%2C 82.482%25 identity (82.482%25 ungapped) in 137 aa overlap. Previously sequenced as TR:Q9F1Y6 (EMBL:AB035202) ORF2.~SC1A4.08%2C unknown (fragment)%2C len: >367 aa. High content in alanine and proline amino acid residues;gbkey=CDS;gene=SC1A4.08;product=cyclase;protein_id=NP_733742.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8537938	8539609	.	+	.	ID=id10024;Note=Region previously sequenced as EMBL:AB035202 Streptomyces coelicolor orf3%2C orf1%2C p52%2C orf2%2C orf4%2C orf5 genes%2C partial and complete cds;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8538368	8539246	.	+	.	ID=gene7764;Dbxref=GeneID:1103139;Name=SCBAC12C8.02;gbkey=Gene;gene=SCBAC12C8.02;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.02;locus_tag=SCO7701
NC_003888.3	RefSeq	CDS	8538368	8539246	.	+	0	ID=cds7629;Parent=gene7764;Dbxref=Genbank:NP_631739.1,GeneID:1103139;Name=NP_631739.1;Note=SCBAC12C8.02%2C possible methyltransferase%2C len: 396aa: similar to many eg. TR:Q9F1V7 (EMBL:AB040071) methyltransferase from Streptomyces griseus (316 aa) fasta scores%3B opt: 1550%2C Z-score: 1809.5%2C 82.246%25 identity (82.545%25 ungapped) in 276 aa overlap. Previously sequenced as TR:Q9F1Y5 (EMBL:AB035202) ORF4.;gbkey=CDS;gene=SCBAC12C8.02;product=methyltransferase;protein_id=NP_631739.1;transl_table=11
NC_003888.3	RefSeq	gene	8539362	8540072	.	+	.	ID=gene7765;Dbxref=GeneID:1103140;Name=SCBAC12C8.03;gbkey=Gene;gene=SCBAC12C8.03;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.03;locus_tag=SCO7702
NC_003888.3	RefSeq	CDS	8539362	8540072	.	+	0	ID=cds7630;Parent=gene7765;Dbxref=Genbank:NP_631740.1,GeneID:1103140;Name=NP_631740.1;Note=SCBAC12C8.03%2C possible GntR-family transcriptional regulator%2C len: 236aa: similar to many eg. TR:Q9S276 (EMBL:AL096844)  GntR-family transcriptional regulator SCI28.07 from Streptomyces coelicolor (230 aa) fasta scores%3B opt: 532%2C Z-score: 608.3%2C 46.262%25 identity (46.698%25 ungapped) in 214 aa overlap and SW:P33233 (LLDR_ECOLI) lactate dehydrogenase operon regulator from Escherichia coli (258 aa) fasta scores%3B opt: 263%2C Z-score: 305.7%2C 29.204%25 identity (31.884%25 ungapped) in 226 aa overlap. Partially previously sequenced as TR:Q9F1Y4 (EMBL:AB035202) ORF5 (fragment). Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and Prosite match to PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=CDS;gene=SCBAC12C8.03;product=GntR family transcriptional regulator;protein_id=NP_631740.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8539410	8539589	.	+	.	ID=id10025;Dbxref=GeneID:1103140;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 68.30%2C E-value 1.5e-19;gbkey=misc_feature;gene=SCBAC12C8.03
NC_003888.3	RefSeq	sequence_feature	8539467	8539541	.	+	.	ID=id10026;Dbxref=GeneID:1103140;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature;gbkey=misc_feature;gene=SCBAC12C8.03
NC_003888.3	RefSeq	gene	8540069	8541319	.	+	.	ID=gene7766;Dbxref=GeneID:1103141;Name=SCBAC12C8.04;gbkey=Gene;gene=SCBAC12C8.04;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.04;locus_tag=SCO7703
NC_003888.3	RefSeq	CDS	8540069	8541319	.	+	0	ID=cds7631;Parent=gene7766;Dbxref=Genbank:NP_631741.1,GeneID:1103141;Name=NP_631741.1;Note=SCBAC12C8.04%2C possible integral membrane transport protein%2C len: 416aa: similar to many eg. TR:BAB35923 (EMBL:AP002558)  amino acid/amine transport protein from Escherichia coli O157:H7 (393 aa) fasta scores%3B opt: 953%2C Z-score: 1012.0%2C 41.207%25 identity (41.645%25 ungapped) in 381 aa overlap. Contains Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SCBAC12C8.04;product=integral membrane transport protein;protein_id=NP_631741.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8540603	8540689	.	+	.	ID=id10027;Dbxref=GeneID:1103141;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp sign.;gbkey=misc_feature;gene=SCBAC12C8.04
NC_003888.3	RefSeq	gene	8541365	8542072	.	+	.	ID=gene7767;Dbxref=GeneID:1103142;Name=SCBAC12C8.05;gbkey=Gene;gene=SCBAC12C8.05;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.05;locus_tag=SCO7704
NC_003888.3	RefSeq	CDS	8541365	8542072	.	+	0	ID=cds7632;Parent=gene7767;Dbxref=Genbank:NP_631742.1,GeneID:1103142;Name=NP_631742.1;Note=SCBAC12C8.05%2C possible TetR-family transcriptional regulator%2C len: 235 aa: similar to many from Streptomyces coelicolor e.g. TR:Q53901 (EMBL:M64683) ORF1-4 (ActII) (259 aa) fasta scores%3B opt: 310%2C Z-score: 362.1%2C 32.889%25 identity (35.071%25 ungapped) in 225 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and Pfam match to entry PF02909 tetR_C%2C Tetracyclin repressor%2C C-terminal all-alpha domain.;gbkey=CDS;gene=SCBAC12C8.05;product=TetR family transcriptional regulator;protein_id=NP_631742.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8541434	8541574	.	+	.	ID=id10028;Dbxref=GeneID:1103142;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 39.50%2C E-value 1.5e-08;gbkey=misc_feature;gene=SCBAC12C8.05
NC_003888.3	RefSeq	sequence_feature	8541617	8541991	.	+	.	ID=id10029;Dbxref=GeneID:1103142;Note=Pfam match to entry PF02909 tetR_C%2C Tetracyclin repressor%2C C-terminal all-alpha domain%2C score -19.50%2C E-value 0.022;gbkey=misc_feature;gene=SCBAC12C8.05
NC_003888.3	RefSeq	gene	8542150	8543340	.	+	.	ID=gene7768;Dbxref=GeneID:1103143;Name=SCBAC12C8.06;gbkey=Gene;gene=SCBAC12C8.06;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.06;locus_tag=SCO7705
NC_003888.3	RefSeq	CDS	8542150	8543340	.	+	0	ID=cds7633;Parent=gene7768;Dbxref=Genbank:NP_631743.1,GeneID:1103143;Name=NP_631743.1;Note=SCBAC12C8.06%2C possible oxidoreductase%2C len: 396aa: similar to many eg. SW:Q01911 (TETX_BACFR) tetracycline resistance oxidoreductase from Bacteroides fragilis (388 aa) fasta scores%3B opt: 612%2C Z-score: 673.8%2C 31.818%25 identity (33.427%25 ungapped) in 374 aa overlap and TR:Q9F3M8 (EMBL:AL450350) oxidoreductase SC10F4.32c from Streptomyces coelicolor (373 aa) fasta scores%3B opt: 1391%2C Z-score: 1524.2%2C 59.116%25 identity (60.795%25 ungapped) in 362 aa overlap. Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase.;gbkey=CDS;gene=SCBAC12C8.06;product=oxidoreductase;protein_id=NP_631743.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8542645	8543259	.	+	.	ID=id10030;Dbxref=GeneID:1103143;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 72.70%2C E-value 7.9e-18;gbkey=misc_feature;gene=SCBAC12C8.06
NC_003888.3	RefSeq	gene	8543383	8544237	.	-	.	ID=gene7769;Dbxref=GeneID:1103144;Name=SCBAC12C8.07c;gbkey=Gene;gene=SCBAC12C8.07c;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.07c;locus_tag=SCO7706
NC_003888.3	RefSeq	CDS	8543383	8544237	.	-	0	ID=cds7634;Parent=gene7769;Dbxref=Genbank:NP_631744.1,GeneID:1103144;Name=NP_631744.1;Note=SCBAC12C8.07c%2C DNA-binding protein%2C len: 284aa: similar to many from Streptomyces coelicolor eg. TR:Q9ADL0 (EMBL:AL451182) DNA-binding protein 2SCK31.04c (291 aa) fasta scores%3B opt: 731%2C Z-score: 816.6%2C 47.778%25 identity in 270 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix.;gbkey=CDS;gene=SCBAC12C8.07c;product=DNA-binding protein;protein_id=NP_631744.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8543995	8544153	.	-	.	ID=id10031;Dbxref=GeneID:1103144;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 23.50%2C E-value 0.0048;gbkey=misc_feature;gene=SCBAC12C8.07c
NC_003888.3	RefSeq	gene	8544375	8544659	.	+	.	ID=gene7770;Dbxref=GeneID:1103145;Name=SCBAC12C8.08;gbkey=Gene;gene=SCBAC12C8.08;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.08;locus_tag=SCO7707
NC_003888.3	RefSeq	CDS	8544375	8544659	.	+	0	ID=cds7635;Parent=gene7770;Dbxref=Genbank:NP_631745.1,GeneID:1103145;Name=NP_631745.1;Note=SCBAC12C8.08%2C conserved hypothetical protein%2C len: 94aa: similar to TR:AAK64828 (EMBL:AE007210) hypothetical protein from Rhizobium meliloti pSymA Megaplasmid (83 aa) fasta scores%3B opt: 346%2C Z-score: 453.2%2C 65.753%25 identity (65.753%25 ungapped) in 73 aa overlap.;gbkey=CDS;gene=SCBAC12C8.08;product=hypothetical protein;protein_id=NP_631745.1;transl_table=11
NC_003888.3	RefSeq	gene	8544693	8545343	.	-	.	ID=gene7771;Dbxref=GeneID:1103146;Name=SCBAC12C8.09c;gbkey=Gene;gene=SCBAC12C8.09c;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.09c;locus_tag=SCO7708
NC_003888.3	RefSeq	CDS	8544693	8545343	.	-	0	ID=cds7636;Parent=gene7771;Dbxref=Genbank:NP_631746.1,GeneID:1103146;Name=NP_631746.1;Note=SCBAC12C8.09c%2C conserved hypothetical protein%2C len: 216aa: similar to many eg. TR:O86609 (EMBL:AL031155) hypothetical protein from Streptomyces coelicolor (211 aa) fasta scores%3B opt: 764%2C Z-score: 865.8%2C 54.673%25 identity (55.981%25 ungapped) in 214 aa overlap.;gbkey=CDS;gene=SCBAC12C8.09c;product=hypothetical protein;protein_id=NP_631746.1;transl_table=11
NC_003888.3	RefSeq	gene	8545444	8545872	.	+	.	ID=gene7772;Dbxref=GeneID:1103147;Name=SCBAC12C8.10;gbkey=Gene;gene=SCBAC12C8.10;gene_biotype=protein_coding;gene_synonym=SCBAC12C8.10;locus_tag=SCO7709
NC_003888.3	RefSeq	CDS	8545444	8545872	.	+	0	ID=cds7637;Parent=gene7772;Dbxref=Genbank:NP_631747.1,GeneID:1103147;Name=NP_631747.1;Note=SCBAC12C8.10%2C possible MarR-family transcriptional regulator%2C len: 142 aa: similar to many e.g. TR:Q9F3P8 (EMBL:AL450350) MarR-family regulatory protein SC10F4.12 from Streptomyces coelicolor fasta scores%3B opt: 337%2C Z-score: 398.2%2C 46.923%25 identity in 130 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family.;gbkey=CDS;gene=SCBAC12C8.10;product=MarR family transcriptional regulator;protein_id=NP_631747.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8545522	8545836	.	+	.	ID=id10032;Dbxref=GeneID:1103147;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 32.00%2C E-value 1.4e-05;gbkey=misc_feature;gene=SCBAC12C8.10
NC_003888.3	RefSeq	gene	8545981	8546727	.	+	.	ID=gene7773;Dbxref=GeneID:1103148;Name=SC8D11.01;gbkey=Gene;gene=SC8D11.01;gene_biotype=protein_coding;gene_synonym=SC8D11.01,SCBAC12C8.11;locus_tag=SCO7710
NC_003888.3	RefSeq	CDS	8545981	8546727	.	+	0	ID=cds7638;Parent=gene7773;Dbxref=Genbank:NP_631748.1,GeneID:1103148;Name=NP_631748.1;Note=SC8D11.01%2C unknown (fragment)%2C len: >37 aa~SCBAC12C8.11%2C possible phosphotransferase%2C len: 248 aa: similar to SW:P18623 (VPH_STRVI) viomycin resistance phosphotransferase Vph from Streptomyces vinaceus (287 aa) fasta scores%3B opt: 17%2C3 Z-score: 197.2%2C 31.527%25 identity (37.870%25 ungapped) in 203 aa overlap.;gbkey=CDS;gene=SC8D11.01;product=phosphotransferase;protein_id=NP_631748.1;transl_table=11
NC_003888.3	RefSeq	gene	8546786	8548315	.	+	.	ID=gene7774;Dbxref=GeneID:1103149;Name=SC8D11.02;gbkey=Gene;gene=SC8D11.02;gene_biotype=protein_coding;gene_synonym=SC8D11.02;locus_tag=SCO7711
NC_003888.3	RefSeq	CDS	8546786	8548315	.	+	0	ID=cds7639;Parent=gene7774;Dbxref=Genbank:NP_631749.1,GeneID:1103149;Name=NP_631749.1;Note=SC8D11.02%2C possible two component system sensor kinase%2C len: 509 aa%3B similar to TR:Q53893 (EMBL:U51332) Streptomyces coelicolor AbsA1%2C 571 aa%3B fasta scores: opt: 852 z-score: 873.7 E(): 0%3B 42.1%25 identity in 489 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8D11.02;product=two component system sensor kinase;protein_id=NP_631749.1;transl_table=11
NC_003888.3	RefSeq	gene	8548323	8549003	.	+	.	ID=gene7775;Dbxref=GeneID:1103150;Name=SC8D11.03;gbkey=Gene;gene=SC8D11.03;gene_biotype=protein_coding;gene_synonym=SC8D11.03;locus_tag=SCO7712
NC_003888.3	RefSeq	CDS	8548323	8549003	.	+	0	ID=cds7640;Parent=gene7775;Dbxref=Genbank:NP_631750.1,GeneID:1103150;Name=NP_631750.1;Note=SC8D11.03%2C possible two component system response regulator%2C len: 226 aa%3B similar to TR:Q53894 (EMBL:U51332) Streptomyces coelicolor AbsA2%2C 222 aa%3B fasta scores: opt: 763 z-score: 842.6 E(): 0%3B 55.3%25 identity in 219 aa overlap. Contains Pfam matches to entries PF00072 response_reg%2C Response regulator receiver domain and PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family and match to Prosite entry PS00622 Bacterial regulatory proteins%2C luxR family signature. Also contains possible helix-turn-helix motif at residues 174..195 (+3.33 SD);gbkey=CDS;gene=SC8D11.03;product=two component system response regulator;protein_id=NP_631750.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8548326	8548667	.	+	.	ID=id10033;Dbxref=GeneID:1103150;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 124.30%2C E-value 2.3e-33;gbkey=misc_feature;gene=SC8D11.03
NC_003888.3	RefSeq	sequence_feature	8548788	8548985	.	+	.	ID=id10034;Dbxref=GeneID:1103150;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 83.40%2C E-value 4.5e-21;gbkey=misc_feature;gene=SC8D11.03
NC_003888.3	RefSeq	sequence_feature	8548839	8548922	.	+	.	ID=id10035;Dbxref=GeneID:1103150;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature;gbkey=misc_feature;gene=SC8D11.03
NC_003888.3	RefSeq	gene	8549088	8549492	.	+	.	ID=gene7776;Dbxref=GeneID:1103151;Name=SC8D11.04;gbkey=Gene;gene=SC8D11.04;gene_biotype=protein_coding;gene_synonym=SC8D11.04;locus_tag=SCO7713
NC_003888.3	RefSeq	CDS	8549088	8549492	.	+	0	ID=cds7641;Parent=gene7776;Dbxref=Genbank:NP_631751.1,GeneID:1103151;Name=NP_631751.1;Note=SC8D11.04%2C unknown%2C len: 134 aa. TBparse predicted;gbkey=CDS;gene=SC8D11.04;product=hypothetical protein;protein_id=NP_631751.1;transl_table=11
NC_003888.3	RefSeq	gene	8549883	8550365	.	+	.	ID=gene7777;Dbxref=GeneID:1103152;Name=SC8D11.05;gbkey=Gene;gene=SC8D11.05;gene_biotype=protein_coding;gene_synonym=SC8D11.05;locus_tag=SCO7714
NC_003888.3	RefSeq	CDS	8549883	8550365	.	+	0	ID=cds7642;Parent=gene7777;Dbxref=Genbank:NP_631752.1,GeneID:1103152;Name=NP_631752.1;Note=SC8D11.05%2C possible acetyltransferase%2C len: 160 aa%3B low similarity to TR:Q9ZF48 (EMBL:AJ000733) Bacillus megaterium hypothetical 18.7 kDa protein%2C 160 aa%3B fasta scores: opt: 159 z-score: 209.7 E(): 0.00038%3B 26.0%25 identity in 154 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC8D11.05;product=acetyltransferase;protein_id=NP_631752.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8550042	8550290	.	+	.	ID=id10036;Dbxref=GeneID:1103152;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 39.30%2C E-value 8.6e-08;gbkey=misc_feature;gene=SC8D11.05
NC_003888.3	RefSeq	gene	8550431	8551234	.	+	.	ID=gene7778;Dbxref=GeneID:1103153;Name=SC8D11.06;gbkey=Gene;gene=SC8D11.06;gene_biotype=protein_coding;gene_synonym=SC8D11.06;locus_tag=SCO7715
NC_003888.3	RefSeq	CDS	8550431	8551234	.	+	0	ID=cds7643;Parent=gene7778;Dbxref=Genbank:NP_631753.1,GeneID:1103153;Name=NP_631753.1;Note=SC8D11.06%2C hypothetical protein%2C len: 267 aa%3B similar to TR:Q9RK84 (EMBL:AL132662) Streptomyces coelicolor hypothetical 29.4 kDa protein SCF11.05%2C 271 aa%3B fasta scores: opt: 918 z-score: 1092.7 E(): 0%3B 55.9%25 identity in 254 aa overlap;gbkey=CDS;gene=SC8D11.06;product=hypothetical protein;protein_id=NP_631753.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8551484	8551487	.	+	.	ID=id10037;gbkey=RBS
NC_003888.3	RefSeq	gene	8551498	8551953	.	+	.	ID=gene7779;Dbxref=GeneID:1103154;Name=SC8D11.07;gbkey=Gene;gene=SC8D11.07;gene_biotype=protein_coding;gene_synonym=SC8D11.07;locus_tag=SCO7716
NC_003888.3	RefSeq	CDS	8551498	8551953	.	+	0	ID=cds7644;Parent=gene7779;Dbxref=Genbank:NP_631754.1,GeneID:1103154;Name=NP_631754.1;Note=SC8D11.07%2C hypothetical protein%2C len: 151 aa%3B similar to TR:Q9L188 (EMBL:AL158057) Streptomyces coelicolor hypothetical 18.3 kDa protein SC10G8.14%2C 168 aa%3B fasta scores: opt: 428 z-score: 542.8 E(): 1.1e-22%3B 46.8%25 identity in 139 aa overlap;gbkey=CDS;gene=SC8D11.07;product=hypothetical protein;protein_id=NP_631754.1;transl_table=11
NC_003888.3	RefSeq	gene	8552007	8552420	.	-	.	ID=gene7780;Dbxref=GeneID:1103155;Name=SC8D11.08c;gbkey=Gene;gene=SC8D11.08c;gene_biotype=protein_coding;gene_synonym=SC8D11.08c;locus_tag=SCO7717
NC_003888.3	RefSeq	CDS	8552007	8552420	.	-	0	ID=cds7645;Parent=gene7780;Dbxref=Genbank:NP_631755.1,GeneID:1103155;Name=NP_631755.1;Note=SC8D11.08c%2C possible hypothetical protein%2C len: 137 aa%3B similar to TR:Q9Z4W4 (EMBL:AL035654) Streptomyces coelicolor hypothetical 14.7 kDa protein SCE8.13c%2C 142 aa%3B fasta scores: opt: 173 z-score: 209.1 E(): 0.00041%3B 38.5%25 identity in 143 aa overlap. Contains possible N-terminal region signal peptide sequence;gbkey=CDS;gene=SC8D11.08c;product=hypothetical protein;protein_id=NP_631755.1;transl_table=11
NC_003888.3	RefSeq	gene	8552524	8553297	.	-	.	ID=gene7781;Dbxref=GeneID:1103156;Name=SC8D11.09c;gbkey=Gene;gene=SC8D11.09c;gene_biotype=protein_coding;gene_synonym=SC8D11.09c;locus_tag=SCO7718
NC_003888.3	RefSeq	CDS	8552524	8553297	.	-	0	ID=cds7646;Parent=gene7781;Dbxref=Genbank:NP_631756.1,GeneID:1103156;Name=NP_631756.1;Note=SC8D11.09c%2C unknown%2C len: 257 aa;gbkey=CDS;gene=SC8D11.09c;product=hypothetical protein;protein_id=NP_631756.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8553309	8553312	.	-	.	ID=id10038;gbkey=RBS
NC_003888.3	RefSeq	gene	8553428	8554087	.	-	.	ID=gene7782;Dbxref=GeneID:1103157;Name=SC8D11.10c;gbkey=Gene;gene=SC8D11.10c;gene_biotype=protein_coding;gene_synonym=SC8D11.10c;locus_tag=SCO7719
NC_003888.3	RefSeq	CDS	8553428	8554087	.	-	0	ID=cds7647;Parent=gene7782;Dbxref=Genbank:NP_631757.1,GeneID:1103157;Name=NP_631757.1;Note=SC8D11.10c%2C probable tetR-family transcriptional regulator%2C len: 219 aa%3B similar to SW:TCMR_STRGA (EMBL:M80674) Streptomyces glaucescens tetracenomycin C transcriptional repressor TcmR%2C 226 aa%3B fasta scores: opt: 249 z-score: 288.5 E(): 1.6e-08%3B 34.4%25 identity in 195 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and a possible helix-turn-helix motif at residues 37..58 (+5.10 SD);gbkey=CDS;gene=SC8D11.10c;product=TetR family transcriptional regulator;protein_id=NP_631757.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8553887	8554027	.	-	.	ID=id10039;Dbxref=GeneID:1103157;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 41.40%2C E-value 4.5e-09;gbkey=misc_feature;gene=SC8D11.10c
NC_003888.3	RefSeq	gene	8554142	8555248	.	+	.	ID=gene7783;Dbxref=GeneID:1103158;Name=SC8D11.11;gbkey=Gene;gene=SC8D11.11;gene_biotype=protein_coding;gene_synonym=SC8D11.11;locus_tag=SCO7720
NC_003888.3	RefSeq	CDS	8554142	8555248	.	+	0	ID=cds7648;Parent=gene7783;Dbxref=Genbank:NP_631758.1,GeneID:1103158;Name=NP_631758.1;Note=SC8D11.11%2C unknown%2C len: 368 aa;gbkey=CDS;gene=SC8D11.11;product=hypothetical protein;protein_id=NP_631758.1;transl_table=11
NC_003888.3	RefSeq	gene	8555357	8556118	.	+	.	ID=gene7784;Dbxref=GeneID:1103159;Name=SC8D11.12;gbkey=Gene;gene=SC8D11.12;gene_biotype=protein_coding;gene_synonym=SC8D11.12;locus_tag=SCO7721
NC_003888.3	RefSeq	CDS	8555357	8556118	.	+	0	ID=cds7649;Parent=gene7784;Dbxref=Genbank:NP_631759.1,GeneID:1103159;Name=NP_631759.1;Note=SC8D11.12%2C conserved hypothetical protein%2C len: 253 aa%3B similar to TR:O86750 (EMBL:AL031035) Streptomyces coelicolor hypothetical 28.3 kDa protein SC6A9.18c%2C 266 aa%3B fasta scores: opt: 418 z-score: 520.0 E(): 2e-21%3B 36.6%25 identity in 246 aa overlap;gbkey=CDS;gene=SC8D11.12;product=hypothetical protein;protein_id=NP_631759.1;transl_table=11
NC_003888.3	RefSeq	gene	8556355	8556939	.	+	.	ID=gene7785;Dbxref=GeneID:1103160;Name=SC8D11.13;gbkey=Gene;gene=SC8D11.13;gene_biotype=protein_coding;gene_synonym=SC8D11.13;locus_tag=SCO7722
NC_003888.3	RefSeq	CDS	8556355	8556939	.	+	0	ID=cds7650;Parent=gene7785;Dbxref=Genbank:NP_631760.1,GeneID:1103160;Name=NP_631760.1;Note=SC8D11.13%2C hypothetical protein%2C len: 194 aa%3B similar to TR:Q9L045 (EMBL:AL163672) Streptomyces coelicolor hypothetical 22.3 kDa protein SCE50.18c%2C 203 aa%3B fasta scores: opt: 588 z-score: 709.1 E(): 5.8e-32%3B 49.7%25 identity in 189 aa overlap;gbkey=CDS;gene=SC8D11.13;product=hypothetical protein;protein_id=NP_631760.1;transl_table=11
NC_003888.3	RefSeq	gene	8557122	8558303	.	-	.	ID=gene7786;Dbxref=GeneID:1103161;Name=SC8D11.14c;gbkey=Gene;gene=SC8D11.14c;gene_biotype=protein_coding;gene_synonym=SC8D11.14c;locus_tag=SCO7723
NC_003888.3	RefSeq	CDS	8557122	8558303	.	-	0	ID=cds7651;Parent=gene7786;Dbxref=Genbank:NP_631761.1,GeneID:1103161;Name=NP_631761.1;Note=SC8D11.14c%2C unknown%2C len: 393 aa;gbkey=CDS;gene=SC8D11.14c;product=hypothetical protein;protein_id=NP_631761.1;transl_table=11
NC_003888.3	RefSeq	gene	8558433	8559848	.	-	.	ID=gene7787;Dbxref=GeneID:1103162;Name=SC8D11.15c;gbkey=Gene;gene=SC8D11.15c;gene_biotype=protein_coding;gene_synonym=SC8D11.15c;locus_tag=SCO7724
NC_003888.3	RefSeq	CDS	8558433	8559848	.	-	0	ID=cds7652;Parent=gene7787;Dbxref=Genbank:NP_631762.1,GeneID:1103162;Name=NP_631762.1;Note=SC8D11.15c%2C hypothetical protein%2C len: 471 aa%3B similar to TR:Q9WX25 (EMBL:AL079345) Streptomyces coelicolor membrane protein SCE68.06c%2C 464 aa%3B fasta scores: opt: 428 z-score: 361.4 E(): 1.4e-12%3B 40.4%25 identity in 478 aa overlap;gbkey=CDS;gene=SC8D11.15c;product=hypothetical protein;protein_id=NP_631762.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8558993	8559566	.	-	.	ID=id10040;Dbxref=GeneID:1103162;Note=high content in alanine%2C glycine and proline amino acid residues;gbkey=misc_feature;gene=SC8D11.15c
NC_003888.3	RefSeq	gene	8559885	8560667	.	+	.	ID=gene7788;Dbxref=GeneID:1103163;Name=SC8D11.16;gbkey=Gene;gene=SC8D11.16;gene_biotype=protein_coding;gene_synonym=SC8D11.16;locus_tag=SCO7725
NC_003888.3	RefSeq	CDS	8559885	8560667	.	+	0	ID=cds7653;Parent=gene7788;Dbxref=Genbank:NP_631763.1,GeneID:1103163;Name=NP_631763.1;Note=SC8D11.16%2C unknown%2C len: 260 aa. High content in alanine amino acid residues;gbkey=CDS;gene=SC8D11.16;product=hypothetical protein;protein_id=NP_631763.1;transl_table=11
NC_003888.3	RefSeq	gene	8561544	8562200	.	+	.	ID=gene7789;Dbxref=GeneID:1103164;Name=SC8D11.17;gbkey=Gene;gene=SC8D11.17;gene_biotype=protein_coding;gene_synonym=SC8D11.17;locus_tag=SCO7726
NC_003888.3	RefSeq	CDS	8561544	8562200	.	+	0	ID=cds7654;Parent=gene7789;Dbxref=Genbank:NP_631764.1,GeneID:1103164;Name=NP_631764.1;Note=SC8D11.17%2C possible hydrolase%2C len: 218 aa%3B similar to SW:YCAC_ECOLI (EMBL:J03412) Escherichia coli 23.1 kDa protein in DmsC-PflA intergenic region YcaC%2C 208 aa%3B fasta scores: opt: 631 z-score: 780.3 E(): 0%3B 48.5%25 identity in 200 aa overlap. Contains Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family;gbkey=CDS;gene=SC8D11.17;product=hydrolase;protein_id=NP_631764.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8561598	8562005	.	+	.	ID=id10041;Dbxref=GeneID:1103164;Note=Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family%2C score 64.30%2C E-value 2.6e-15;gbkey=misc_feature;gene=SC8D11.17
NC_003888.3	RefSeq	gene	8562591	8563058	.	-	.	ID=gene7790;Dbxref=GeneID:1103165;Name=SC8D11.18c;gbkey=Gene;gene=SC8D11.18c;gene_biotype=protein_coding;gene_synonym=SC8D11.18c;locus_tag=SCO7727
NC_003888.3	RefSeq	CDS	8562591	8563058	.	-	0	ID=cds7655;Parent=gene7790;Dbxref=Genbank:NP_631765.1,GeneID:1103165;Name=NP_631765.1;Note=SC8D11.18c%2C possible marR-family regulatory protein%2C len: 155 aa%3B similar to TR:Q9X5U1 (EMBL:AF127374) Streptomyces lavendulae repressor MmcW%2C 163 aa%3B fasta scores: opt: 351 z-score: 450.9 E(): 1.4e-17%3B 36.2%25 identity in 152 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SC8D11.18c;product=MarR family regulatory protein;protein_id=NP_631765.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8562621	8562941	.	-	.	ID=id10042;Dbxref=GeneID:1103165;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 46.80%2C E-value 5e-10;gbkey=misc_feature;gene=SC8D11.18c
NC_003888.3	RefSeq	ribosome_entry_site	8563199	8563205	.	+	.	ID=id10043;gbkey=RBS
NC_003888.3	RefSeq	gene	8563210	8563518	.	+	.	ID=gene7791;Dbxref=GeneID:1103166;Name=SC8D11.19;gbkey=Gene;gene=SC8D11.19;gene_biotype=protein_coding;gene_synonym=SC8D11.19;locus_tag=SCO7728
NC_003888.3	RefSeq	CDS	8563210	8563518	.	+	0	ID=cds7656;Parent=gene7791;Dbxref=Genbank:NP_631766.1,GeneID:1103166;Name=NP_631766.1;Note=SC8D11.19%2C conserved hypothetical protein%2C len: 102 aa%3B similar to TR:Q9RTC1 (EMBL:AE002024) Deinococcus radiodurans conserved hypothetical protein DR1844%2C 93 aa%3B fasta scores: opt: 232 z-score: 318.9 E(): 3.2e-10%3B 45.8%25 identity in 83 aa overlap;gbkey=CDS;gene=SC8D11.19;product=hypothetical protein;protein_id=NP_631766.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8563611	8563618	.	+	.	ID=id10044;gbkey=RBS
NC_003888.3	RefSeq	gene	8563625	8564623	.	+	.	ID=gene7792;Dbxref=GeneID:1103167;Name=SC8D11.20;gbkey=Gene;gene=SC8D11.20;gene_biotype=protein_coding;gene_synonym=SC8D11.20;locus_tag=SCO7729
NC_003888.3	RefSeq	CDS	8563625	8564623	.	+	0	ID=cds7657;Parent=gene7792;Dbxref=Genbank:NP_631767.1,GeneID:1103167;Name=NP_631767.1;Note=SC8D11.20%2C hypothetical protein%2C len: 332 aa%3B highly similar to TR:Q9RJG6 (EMBL:AL121600) Streptomyces coelicolor hypothetical 34.3 kDa protein SCF76.08c%2C 325 aa%3B fasta scores: opt: 1541 z-score: 1742.5 E(): 0%3B 71.4%25 identity in 311 aa overlap;gbkey=CDS;gene=SC8D11.20;product=hypothetical protein;protein_id=NP_631767.1;transl_table=11
NC_003888.3	RefSeq	gene	8564658	8564996	.	+	.	ID=gene7793;Dbxref=GeneID:1103168;Name=SC8D11.21;gbkey=Gene;gene=SC8D11.21;gene_biotype=protein_coding;gene_synonym=SC8D11.21;locus_tag=SCO7730
NC_003888.3	RefSeq	CDS	8564658	8564996	.	+	0	ID=cds7658;Parent=gene7793;Dbxref=Genbank:NP_631768.1,GeneID:1103168;Name=NP_631768.1;Note=SC8D11.21%2C conserved hypothetical protein%2C len: 112 aa%3B similar to TR:Q9RTC1 (EMBL:AE002024) Deinococcus radiodurans conserved hypothetical protein DR1844%2C 93 aa%3B fasta scores: opt: 259 z-score: 352.8 E(): 4.1e-12%3B 42.4%25 identity in 85 aa overlap;gbkey=CDS;gene=SC8D11.21;product=hypothetical protein;protein_id=NP_631768.1;transl_table=11
NC_003888.3	RefSeq	gene	8565486	8566037	.	+	.	ID=gene7794;Dbxref=GeneID:1103169;Name=SC8D11.22;gbkey=Gene;gene=SC8D11.22;gene_biotype=protein_coding;gene_synonym=SC8D11.22;locus_tag=SCO7731
NC_003888.3	RefSeq	CDS	8565486	8566037	.	+	0	ID=cds7659;Parent=gene7794;Dbxref=Genbank:NP_631769.1,GeneID:1103169;Name=NP_631769.1;Note=SC8D11.22%2C unknown%2C len: 183 aa;gbkey=CDS;gene=SC8D11.22;product=hypothetical protein;protein_id=NP_631769.1;transl_table=11
NC_003888.3	RefSeq	gene	8566732	8567118	.	+	.	ID=gene7795;Dbxref=GeneID:1103170;Name=SC8D11.23;gbkey=Gene;gene=SC8D11.23;gene_biotype=protein_coding;gene_synonym=SC8D11.23;locus_tag=SCO7732
NC_003888.3	RefSeq	CDS	8566732	8567118	.	+	0	ID=cds7660;Parent=gene7795;Dbxref=Genbank:NP_631770.1,GeneID:1103170;Name=NP_631770.1;Note=SC8D11.23%2C unknown%2C len: 128 aa;gbkey=CDS;gene=SC8D11.23;product=hypothetical protein;protein_id=NP_631770.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8567119	8567123	.	+	.	ID=id10045;gbkey=RBS
NC_003888.3	RefSeq	gene	8567132	8569351	.	+	.	ID=gene7796;Dbxref=GeneID:1103171;Name=SC8D11.24;gbkey=Gene;gene=SC8D11.24;gene_biotype=protein_coding;gene_synonym=SC8D11.24;locus_tag=SCO7733
NC_003888.3	RefSeq	CDS	8567132	8569351	.	+	0	ID=cds7661;Parent=gene7796;Dbxref=Genbank:NP_631771.1,GeneID:1103171;Name=NP_631771.1;Note=SC8D11.24%2C possible transcriptional regulatory protein%2C len: 739 aa. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix. Also contains a possible helix-turn-helix motif at residues 40..61 (+4.44 SD);gbkey=CDS;gene=SC8D11.24;product=transcriptional regulator;protein_id=NP_631771.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8567228	8567389	.	+	.	ID=id10046;Dbxref=GeneID:1103171;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 33.10%2C E-value 6.5e-06;gbkey=misc_feature;gene=SC8D11.24
NC_003888.3	RefSeq	sequence_feature	8567386	8567616	.	+	.	ID=id10047;Dbxref=GeneID:1103171;Note=high G+C content region (83.11%25);gbkey=misc_feature;gene=SC8D11.24
NC_003888.3	RefSeq	ribosome_entry_site	8569350	8569354	.	+	.	ID=id10048;gbkey=RBS
NC_003888.3	RefSeq	gene	8569361	8569918	.	+	.	ID=gene7797;Dbxref=GeneID:1103172;Name=SC8D11.25;gbkey=Gene;gene=SC8D11.25;gene_biotype=protein_coding;gene_synonym=SC8D11.25;locus_tag=SCO7734
NC_003888.3	RefSeq	CDS	8569361	8569918	.	+	0	ID=cds7662;Parent=gene7797;Dbxref=Genbank:NP_631772.1,GeneID:1103172;Name=NP_631772.1;Note=SC8D11.25%2C unknown%2C len: 185 aa;gbkey=CDS;gene=SC8D11.25;product=hypothetical protein;protein_id=NP_631772.1;transl_table=11
NC_003888.3	RefSeq	gene	8569962	8570174	.	+	.	ID=gene7798;Dbxref=GeneID:1103173;Name=SC8D11.26;gbkey=Gene;gene=SC8D11.26;gene_biotype=protein_coding;gene_synonym=SC8D11.26;locus_tag=SCO7735
NC_003888.3	RefSeq	CDS	8569962	8570174	.	+	0	ID=cds7663;Parent=gene7798;Dbxref=Genbank:NP_631773.1,GeneID:1103173;Name=NP_631773.1;Note=SC8D11.26%2C unknown%2C len: 70 aa;gbkey=CDS;gene=SC8D11.26;product=hypothetical protein;protein_id=NP_631773.1;transl_table=11
NC_003888.3	RefSeq	gene	8570209	8572470	.	-	.	ID=gene7799;Dbxref=GeneID:1103174;Name=SC8D11.27c;gbkey=Gene;gene=SC8D11.27c;gene_biotype=protein_coding;gene_synonym=SC8D11.27c;locus_tag=SCO7736
NC_003888.3	RefSeq	CDS	8570209	8572470	.	-	0	ID=cds7664;Parent=gene7799;Dbxref=Genbank:NP_631774.1,GeneID:1103174;Name=NP_631774.1;Note=SC8D11.27c%2C possible integral membrane protein%2C len: 753 aa%3B similar to TR:Q9K4J6 (EMBL:AL357613) Streptomyces coelicolor hypothetical 79.6 kDa protein SC5F8.28c%2C 752 aa%3B fasta scores: opt: 773 z-score: 865.8 E(): 0%3B 37.3%25 identity in 743 aa overlap. Contains 10 possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8D11.27c;product=hypothetical protein;protein_id=NP_631774.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8572477	8572480	.	-	.	ID=id10049;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8573126	8573129	.	+	.	ID=id10050;gbkey=RBS
NC_003888.3	RefSeq	gene	8573140	8573652	.	+	.	ID=gene7800;Dbxref=GeneID:1103175;Name=SC8D11.28;gbkey=Gene;gene=SC8D11.28;gene_biotype=protein_coding;gene_synonym=SC8D11.28;locus_tag=SCO7737
NC_003888.3	RefSeq	CDS	8573140	8573652	.	+	0	ID=cds7665;Parent=gene7800;Dbxref=Genbank:NP_631775.1,GeneID:1103175;Name=NP_631775.1;Note=SC8D11.28%2C unknown%2C len: 170 aa;gbkey=CDS;gene=SC8D11.28;product=hypothetical protein;protein_id=NP_631775.1;transl_table=11
NC_003888.3	RefSeq	gene	8573919	8574302	.	-	.	ID=gene7801;Dbxref=GeneID:1103176;Name=SC8D11.29c;gbkey=Gene;gene=SC8D11.29c;gene_biotype=protein_coding;gene_synonym=SC8D11.29c;locus_tag=SCO7738
NC_003888.3	RefSeq	CDS	8573919	8574302	.	-	0	ID=cds7666;Parent=gene7801;Dbxref=Genbank:NP_631776.1,GeneID:1103176;Name=NP_631776.1;Note=SC8D11.29c%2C conserved hypothetical protein%2C len: 127 aa%3B similar to SW:Y854_PYRHO (EMBL:AP000003) Pyrococcus horikoshii hypothetical protein PH854%2C 137 aa%3B fasta scores: opt: 338 z-score: 424.9 E(): 3.9e-16%3B 45.1%25 identity in 122 aa overlap. Contains Pfam match to entry PF01042 UPF0076%2C Domain of unknown function UPF0076;gbkey=CDS;gene=SC8D11.29c;product=hypothetical protein;protein_id=NP_631776.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8573928	8574281	.	-	.	ID=id10051;Dbxref=GeneID:1103176;Note=Pfam match to entry PF01042 UPF0076%2C Domain of unknown function UPF0076%2C score 120.50%2C E-value 3.1e-32;gbkey=misc_feature;gene=SC8D11.29c
NC_003888.3	RefSeq	gene	8574364	8575071	.	-	.	ID=gene7802;Dbxref=GeneID:1103177;Name=SC8D11.30c;gbkey=Gene;gene=SC8D11.30c;gene_biotype=protein_coding;gene_synonym=SC8D11.30c;locus_tag=SCO7739
NC_003888.3	RefSeq	CDS	8574364	8575071	.	-	0	ID=cds7667;Parent=gene7802;Dbxref=Genbank:NP_631777.1,GeneID:1103177;Name=NP_631777.1;Note=SC8D11.30c%2C possible hydrolase%2C len: 235 aa%3B similar to C-terminal region of SW:PCD_ARTOX (EMBL:M94965) Arthrobacter oxidans phemedipham hydrolase (EC 3.1.1.-) Pcd%2C 493 aa%3B fasta scores: opt: 219 z-score: 259.2 E(): 6.7e-07%3B 28.1%25 identity in 199 aa overlap. Contains 2x Pfam matches to entry PF00135 COesterase%2C Carboxylesterases;gbkey=CDS;gene=SC8D11.30c;product=hydrolase;protein_id=NP_631777.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8574370	8574753	.	-	.	ID=id10052;Dbxref=GeneID:1103177;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterases%2C score 42.30%2C E-value 1.2e-11;gbkey=misc_feature;gene=SC8D11.30c
NC_003888.3	RefSeq	sequence_feature	8574907	8574966	.	-	.	ID=id10053;Dbxref=GeneID:1103177;Note=Pfam match to entry PF00135 COesterase%2C Carboxylesterases%2C score 5.50%2C E-value 0.61;gbkey=misc_feature;gene=SC8D11.30c
NC_003888.3	RefSeq	gene	8575438	8575674	.	-	.	ID=gene7803;Dbxref=GeneID:1103178;Name=SC8D11.31c;gbkey=Gene;gene=SC8D11.31c;gene_biotype=protein_coding;gene_synonym=SC8D11.31c;locus_tag=SCO7740
NC_003888.3	RefSeq	CDS	8575438	8575674	.	-	0	ID=cds7668;Parent=gene7803;Dbxref=Genbank:NP_631778.1,GeneID:1103178;Name=NP_631778.1;Note=SC8D11.31c%2C hypothetical protein%2C len: 78 aa%3B similar to N-terminal domain of SW:YIS1_STRCO (EMBL:Y00434) Streptomyces coelicolor insertion element IS110 hypothetical 43.6 kDa protein SC3C8.10%2C 405 aa%3B fasta scores: opt: 292 z-score: 354.8 E(): 4.6e-14%3B 68.8%25 identity in 64 aa overlap;gbkey=CDS;gene=SC8D11.31c;product=hypothetical protein;protein_id=NP_631778.1;transl_table=11
NC_003888.3	RefSeq	gene	8576308	8577372	.	-	.	ID=gene7804;Dbxref=GeneID:1103179;Name=SC8D11.32c;gbkey=Gene;gene=SC8D11.32c;gene_biotype=protein_coding;gene_synonym=SC8D11.32c;locus_tag=SCO7741
NC_003888.3	RefSeq	CDS	8576308	8577372	.	-	0	ID=cds7669;Parent=gene7804;Dbxref=Genbank:NP_631779.1,GeneID:1103179;Name=NP_631779.1;Note=SC8D11.32c%2C possible bifunctional protein%2C len: 354 aa%3B N-terminal region similar to TR:Q9RKU1 (EMBL:AL132824) Streptomyces coelicolor reductase SCAH10.16%2C 185 aa%3B fasta scores: opt: 387 z-score: 473.3 E(): 8e-19%3B 39.0%25 identity in 187 aa overlap and C-terminal region similar to SW:YIEF_ECOLI (EMBL:L10328) Escherichia coli hypothetical 20.4 kDa protein YieF%2C 188 aa%3B blastp scores: Score%3D 148 (52.1 bits)%2C Expect%3D 7.0e-10%2C P%3D 7.0e-10%3B Identities%3D 49/139 (35%25)%2C Positives%3D 78/139 (56%25). Contains Pfam match in C-terminal region to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family;gbkey=CDS;gene=SC8D11.32c;product=hypothetical protein;protein_id=NP_631779.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8576368	8576586	.	-	.	ID=id10054;Dbxref=GeneID:1103179;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 52.00%2C E-value 1.3e-11;gbkey=misc_feature;gene=SC8D11.32c
NC_003888.3	RefSeq	gene	8577403	8577879	.	+	.	ID=gene7805;Dbxref=GeneID:1103180;Name=SC8D11.33;gbkey=Gene;gene=SC8D11.33;gene_biotype=protein_coding;gene_synonym=SC8D11.33;locus_tag=SCO7742
NC_003888.3	RefSeq	CDS	8577403	8577879	.	+	0	ID=cds7670;Parent=gene7805;Dbxref=Genbank:NP_631780.1,GeneID:1103180;Name=NP_631780.1;Note=SC8D11.33%2C probable MarR-family transcriptional regulator%2C len: 132 aa%3B similar to TR:Q9X5U1 (EMBL:AF127374) Streptomyces lavendulae repressor MmcW%2C 163 aa%3B fasta scores: opt: 268 z-score: 334.9 E(): 4.1e-11%3B 36.9%25 identity in 141 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family. Also contains possible helix-turn-helix motif at residues 63..84 (+3.77 SD);gbkey=CDS;gene=SC8D11.33;product=MarR family transcriptional regulator;protein_id=NP_631780.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8577532	8577852	.	+	.	ID=id10055;Dbxref=GeneID:1103180;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 62.10%2C E-value 1.2e-14;gbkey=misc_feature;gene=SC8D11.33
NC_003888.3	RefSeq	gene	8578000	8578485	.	-	.	ID=gene7806;Dbxref=GeneID:1103181;Name=SC8D11.34c;gbkey=Gene;gene=SC8D11.34c;gene_biotype=protein_coding;gene_synonym=SC8D11.34c;locus_tag=SCO7743
NC_003888.3	RefSeq	CDS	8578000	8578485	.	-	0	ID=cds7671;Parent=gene7806;Dbxref=Genbank:NP_631781.1,GeneID:1103181;Name=NP_631781.1;Note=SC8D11.34c%2C unknown%2C len: 161 aa;gbkey=CDS;gene=SC8D11.34c;product=hypothetical protein;protein_id=NP_631781.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8578000	8578020	.	-	.	ID=id10056;Dbxref=GeneID:1103181;Note=inverted repeat;gbkey=misc_feature;gene=SC8D11.34c
NC_003888.3	RefSeq	gene	8578618	8578767	.	-	.	ID=gene7807;Dbxref=GeneID:1103182;Name=SC8D11.35c;gbkey=Gene;gene=SC8D11.35c;gene_biotype=pseudogene;gene_synonym=SC8D11.35c;locus_tag=SCO7744;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8578618	8578767	.	-	.	ID=id10057;Dbxref=GeneID:1103182;Note=SC8D11.35c%2C pseudogene%2C 50 aa%3B similar to C-terminal region of TR:Q9XBE1 (EMBL:AL078635) Amycolatopsis orientalis  transposase (fragment)%2C 148 aa%3B fasta scores: opt: 163 z-score: 256.4 E(): 9.6e-07%3B 52.0%25 identity in 50 aa overlap and to middle-end part of Streptomyces coelicolor SCP1.215%2C 156 aa%3B fasta scores: opt: 200 z-score: 269.5 E(): 2.6e-09%3B 56.0%25 identity in 50 aa overlap;gbkey=misc_feature;gene=SC8D11.35c
NC_003888.3	RefSeq	gene	8578763	8578870	.	-	.	ID=gene7808;Dbxref=GeneID:1103183;Name=SC8D11.36c;gbkey=Gene;gene=SC8D11.36c;gene_biotype=pseudogene;gene_synonym=SC8D11.36c;locus_tag=SCO7745;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8578763	8578870	.	-	.	ID=id10058;Dbxref=GeneID:1103183;Note=SC8D11.36c%2C pseudogene%2C 36 aa%3B similar to N-terminal region of TR:Q9XBE1 (EMBL:AL078635) Amycolatopsis orientalis  transposase (fragment)%2C 148 aa%3B fasta scores: opt: 160 z-score: 268.1 E(): 2.1e-07%3B 66.7%25 identity in 36 aa overlap and to middle part of Streptomyces coelicolor SCP1.215%2C 156 aa%3B fasta scores: opt: 172 z-score: 237.3 E(): 1.6e-07%3B 74.3%25 identity in 35 aa overlap;gbkey=misc_feature;gene=SC8D11.36c
NC_003888.3	RefSeq	gene	8579043	8579414	.	-	.	ID=gene7809;Dbxref=GeneID:1103184;Name=SC8D11.37c;gbkey=Gene;gene=SC8D11.37c;gene_biotype=protein_coding;gene_synonym=SC8D11.37c;locus_tag=SCO7746
NC_003888.3	RefSeq	CDS	8579043	8579414	.	-	0	ID=cds7672;Parent=gene7809;Dbxref=Genbank:NP_631782.1,GeneID:1103184;Name=NP_631782.1;Note=SC8D11.37c%2C possible insertion element transposase%2C len: 123 aa%3B similar to TR:Q9XBE2 (EMBL:AL078635) Amycolatopsis orientalis transposase CZA382.09%2C 142 aa%3B fasta scores: opt: 369 z-score: 493.0 E(): 6.4e-20%3B 45.4%25 identity in 119 aa overlap and to Streptomyces coelicolor SCP1.214%2C 140 aa%3B fasta scores: opt: 419 z-score: 472.1 E(): 1.3e-20%3B 50.4%25 identity in 115 aa overlap;gbkey=CDS;gene=SC8D11.37c;product=insertion element transposase;protein_id=NP_631782.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8579435	8579455	.	-	.	ID=id10059;Note=inverted repeat;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8580056	8581234	.	+	.	ID=gene7810;Dbxref=GeneID:1103185;Name=SC8D11.38;gbkey=Gene;gene=SC8D11.38;gene_biotype=protein_coding;gene_synonym=SC8D11.38;locus_tag=SCO7747
NC_003888.3	RefSeq	CDS	8580056	8581234	.	+	0	ID=cds7673;Parent=gene7810;Dbxref=Genbank:NP_631783.1,GeneID:1103185;Name=NP_631783.1;Note=SC8D11.38%2C hypothetical protein%2C len: 392 aa%3B similar to TR:Q9L195 (EMBL:AL158057) Streptomyces coelicolor hypothetical 47.1 kDa protein SC10G8.07c%2C 437 aa%3B fasta scores: opt: 419 z-score: 494.1 E(): 5.5e-20%3B 28.5%25 identity in 393 aa overlap;gbkey=CDS;gene=SC8D11.38;product=hypothetical protein;protein_id=NP_631783.1;transl_table=11
NC_003888.3	RefSeq	gene	8581406	8583109	.	+	.	ID=gene7811;Dbxref=GeneID:1103186;Name=SC8D11.39;gbkey=Gene;gene=SC8D11.39;gene_biotype=protein_coding;gene_synonym=SC8D11.39;locus_tag=SCO7748
NC_003888.3	RefSeq	CDS	8581406	8583109	.	+	0	ID=cds7674;Parent=gene7811;Dbxref=Genbank:NP_631784.1,GeneID:1103186;Name=NP_631784.1;Note=SC8D11.39%2C hypothetical protein%2C len: 567 aa%3B similar to TR:CAC14487 (EMBL:AL446003) Streptomyces coelicolor DNA-binding protein SC5E9.07%2C 531 aa%3B fasta scores: opt: 473 z-score: 523.3 E(): 1.3e-21%3B 30.3%25 identity in 433 aa overlap. Contains match to Prosite entry PS00237 G-protein coupled receptors signature and 4x degenerate repeat: HAVVP;gbkey=CDS;gene=SC8D11.39;product=hypothetical protein;protein_id=NP_631784.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8581628	8581687	.	+	.	ID=id10060;Dbxref=GeneID:1103186;Note=4x degenerate repeat translated in SC8D11.39;gbkey=misc_feature;gene=SC8D11.39
NC_003888.3	RefSeq	sequence_feature	8581856	8581906	.	+	.	ID=id10061;Dbxref=GeneID:1103186;Note=PS00237 G-protein coupled receptors signature;gbkey=misc_feature;gene=SC8D11.39
NC_003888.3	RefSeq	gene	8583106	8584200	.	+	.	ID=gene7812;Dbxref=GeneID:1103187;Name=SC8D11.40;gbkey=Gene;gene=SC8D11.40;gene_biotype=protein_coding;gene_synonym=SC8D11.40;locus_tag=SCO7749
NC_003888.3	RefSeq	CDS	8583106	8584200	.	+	0	ID=cds7675;Parent=gene7812;Dbxref=Genbank:NP_631785.1,GeneID:1103187;Name=NP_631785.1;Note=SC8D11.40%2C unknown%2C len: 364 aa;gbkey=CDS;gene=SC8D11.40;product=hypothetical protein;protein_id=NP_631785.1;transl_table=11
NC_003888.3	RefSeq	gene	8584197	8584610	.	+	.	ID=gene7813;Dbxref=GeneID:1103188;Name=SC8D11.41;gbkey=Gene;gene=SC8D11.41;gene_biotype=protein_coding;gene_synonym=SC8D11.41;locus_tag=SCO7750
NC_003888.3	RefSeq	CDS	8584197	8584610	.	+	0	ID=cds7676;Parent=gene7813;Dbxref=Genbank:NP_631786.1,GeneID:1103188;Name=NP_631786.1;Note=SC8D11.41%2C hypothetical protein%2C len: 137 aa%3B low similarity to TR:Q9RIS6 (EMBL:AJ249581) Streptomyces coelicolor anti anti sigma factor SCE25.08c%2C 125 aa%3B fasta scores: opt: 110 z-score: 148.5 E(): 0.98%3B 33.8%25 identity in 77 aa overlap;gbkey=CDS;gene=SC8D11.41;product=hypothetical protein;protein_id=NP_631786.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8584651	8584655	.	+	.	ID=id10062;gbkey=RBS
NC_003888.3	RefSeq	gene	8584661	8585167	.	+	.	ID=gene7814;Dbxref=GeneID:1103189;Name=SC8D11.42;gbkey=Gene;gene=SC8D11.42;gene_biotype=protein_coding;gene_synonym=SC8D11.42;locus_tag=SCO7751
NC_003888.3	RefSeq	CDS	8584661	8585167	.	+	0	ID=cds7677;Parent=gene7814;Dbxref=Genbank:NP_631787.1,GeneID:1103189;Name=NP_631787.1;Note=SC8D11.42%2C possible regulatory protein%2C len: 168 aa%3B similar to TR:P71672 (EMBL:Z80108) Mycobacterium tuberculosis hypothetical 17.5 kDa protein CY21B4.21 precursor%2C 160 aa%3B fasta scores: opt: 206 z-score: 269.5 E(): 1.8e-07%3B 27.8%25 identity in 144 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family;gbkey=CDS;gene=SC8D11.42;product=regulatory protein;protein_id=NP_631787.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8584790	8585101	.	+	.	ID=id10063;Dbxref=GeneID:1103189;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 63.10%2C E-value 6e-15;gbkey=misc_feature;gene=SC8D11.42
NC_003888.3	RefSeq	gene	8585463	8586017	.	-	.	ID=gene7815;Dbxref=GeneID:1103190;Name=SC8D11.43c;gbkey=Gene;gene=SC8D11.43c;gene_biotype=protein_coding;gene_synonym=SC8D11.43c;locus_tag=SCO7752
NC_003888.3	RefSeq	CDS	8585463	8586017	.	-	0	ID=cds7678;Parent=gene7815;Dbxref=Genbank:NP_631788.1,GeneID:1103190;Name=NP_631788.1;Note=SC8D11.43c%2C possible integral membrane protein%2C len: 184 aa%3B similar to TR:Q9X7R2 (EMBL:AL049863) Streptomyces coelicolor possible membrane protein SC5H1.04c%2C 167 aa%3B fasta scores: opt: 505 z-score: 631.2 E(): 1.3e-27%3B 48.7%25 identity in 150 aa overlap. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC8D11.43c;product=hypothetical protein;protein_id=NP_631788.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8586029	8586033	.	-	.	ID=id10064;gbkey=RBS
NC_003888.3	RefSeq	gene	8586108	8586500	.	-	.	ID=gene7816;Dbxref=GeneID:1103191;Name=SC5E9.01c;gbkey=Gene;gene=SC5E9.01c;gene_biotype=protein_coding;gene_synonym=SC5E9.01c,SC8D11.44c;locus_tag=SCO7753
NC_003888.3	RefSeq	CDS	8586108	8586500	.	-	0	ID=cds7679;Parent=gene7816;Dbxref=Genbank:NP_733743.1,GeneID:1103191;Name=NP_733743.1;Note=SC5E9.01c%2C unknown%2C len: 93 aa~SC8D11.44c%2C unknown (fragment)%2C len: >76 aa;gbkey=CDS;gene=SC5E9.01c;product=hypothetical protein;protein_id=NP_733743.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8586579	8586583	.	+	.	ID=id10065;gbkey=RBS
NC_003888.3	RefSeq	gene	8586592	8586975	.	+	.	ID=gene7817;Dbxref=GeneID:1103192;Name=SC5E9.02;gbkey=Gene;gene=SC5E9.02;gene_biotype=protein_coding;gene_synonym=SC5E9.02;locus_tag=SCO7754
NC_003888.3	RefSeq	CDS	8586592	8586975	.	+	0	ID=cds7680;Parent=gene7817;Dbxref=Genbank:NP_631789.1,GeneID:1103192;Name=NP_631789.1;Note=SC5E9.02%2C possible anti-sigma factor antagonist%2C len: 127aa%3B weakly similar to many eg. SW:Q9WVX8 (RSBV_STRCO) anti-sigma B factor antagonist from Streptomyces coelicolor (113 aa) fasta scores%3B opt: 118%2C z-score: 164.6%2C E(): 0.11%2C 27.7%25 identity in 94 aa overlap. Contains Pfam match to entry PF01740 STAS%2C STAS domain.;gbkey=CDS;gene=SC5E9.02;product=anti-sigma factor antagonist;protein_id=NP_631789.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8586667	8586963	.	+	.	ID=id10066;Dbxref=GeneID:1103192;Note=Pfam match to entry PF01740 STAS%2C STAS domain%2C score 38.20%2C E-value 1.9e-07;gbkey=misc_feature;gene=SC5E9.02
NC_003888.3	RefSeq	ribosome_entry_site	8587122	8587125	.	+	.	ID=id10067;gbkey=RBS
NC_003888.3	RefSeq	gene	8587133	8587375	.	+	.	ID=gene7818;Dbxref=GeneID:1103193;Name=SC5E9.03;gbkey=Gene;gene=SC5E9.03;gene_biotype=protein_coding;gene_synonym=SC5E9.03;locus_tag=SCO7755
NC_003888.3	RefSeq	CDS	8587133	8587375	.	+	0	ID=cds7681;Parent=gene7818;Dbxref=Genbank:NP_631790.1,GeneID:1103193;Name=NP_631790.1;Note=SC5E9.03%2C conserved hypothetical protein%2C len: 80aa%3B similar to others from Streptomyces coelicolor eg. TR:O54206 (EMBL:AJ001206) pepA hypothetical protein from the glycogen metabolism cluster (90 aa) fasta scores%3B opt: 116%2C z-score: 182.1%2C E(): 0.011%2C 36.3%25 identity in 80 aa overlap.;gbkey=CDS;gene=SC5E9.03;product=hypothetical protein;protein_id=NP_631790.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8587389	8587393	.	+	.	ID=id10068;gbkey=RBS
NC_003888.3	RefSeq	gene	8587396	8587620	.	+	.	ID=gene7819;Dbxref=GeneID:1103194;Name=SC5E9.04;gbkey=Gene;gene=SC5E9.04;gene_biotype=protein_coding;gene_synonym=SC5E9.04;locus_tag=SCO7756
NC_003888.3	RefSeq	CDS	8587396	8587620	.	+	0	ID=cds7682;Parent=gene7819;Dbxref=Genbank:NP_631791.1,GeneID:1103194;Name=NP_631791.1;Note=SC5E9.04%2C unknown%2C len: 74 aa;gbkey=CDS;gene=SC5E9.04;product=hypothetical protein;protein_id=NP_631791.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8588226	8589104	.	-	.	ID=id10069;Note=Insertion element IS1650;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8588247	8589100	.	-	.	ID=gene7820;Dbxref=GeneID:1103195;Name=SC5E9.05c;gbkey=Gene;gene=SC5E9.05c;gene_biotype=pseudogene;gene_synonym=SC5E9.05c,SC5E9.06c;locus_tag=SCO7757;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8588247	8589100	.	-	.	ID=id10070;Dbxref=GeneID:1103195;Note=SC5E9.05c%2C possible IS1650 transposase%2C partial CDS%2C len: 148 aa%3B similar to many%2C identical to TR:Q9XAE7 (EMBL:AL079356)  transposase from Streptomyces coelicolor (148 aa). May be translated by frameshift from upstream CDS.~SC5E9.06c%2C possible IS1650 transposase%2C partial CDS%2C len: 136 aa%3B similar to many%2C identical to TR:Q9XAE6 (EMBL:AL079356) transposase from Streptomyces coelicolor (136 aa). Translated may frameshift into downstream CDS. Contains Pfam match to entry PF01511 Transposase_6%2C Transposase.%3Btransposase;gbkey=misc_feature;gene=SC5E9.05c
NC_003888.3	RefSeq	sequence_feature	8588720	8588980	.	-	.	ID=id10071;Dbxref=GeneID:1103195;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 34.10%2C E-value 2.3e-07;gbkey=misc_feature;gene=SC5E9.05c
NC_003888.3	RefSeq	sequence_feature	8589107	8589109	.	+	.	ID=id10072;Note=tta;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8589189	8590784	.	+	.	ID=gene7821;Dbxref=GeneID:1103196;Name=SC5E9.07;gbkey=Gene;gene=SC5E9.07;gene_biotype=protein_coding;gene_synonym=SC5E9.07;locus_tag=SCO7759
NC_003888.3	RefSeq	CDS	8589189	8590784	.	+	0	ID=cds7683;Parent=gene7821;Dbxref=Genbank:NP_631792.1,GeneID:1103196;Name=NP_631792.1;Note=SC5E9.07%2C possible DNA-binding protein%2C len: 531aa%3B similar to many conserved hypothetical proteins eg. TR:Q9X8W1 (EMBL:AL078610) hypothetical protein from Streptomyces coelicolor (634 aa) fasta scores%3B opt: 1459%2C z-score: 1666.8%2C E(): 0%2C 48.8%25 identity in 531 aa overlap. Contains helix-turn-helix motif (Score 1136 (+3.06 SD)) at residue 18-39. Note possible alternative translational start sites. Also contains Pfam match to entry PF01590 GAF%2C GAF domain.;gbkey=CDS;gene=SC5E9.07;product=DNA-binding protein;protein_id=NP_631792.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8589501	8590022	.	+	.	ID=id10073;Dbxref=GeneID:1103196;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 48.80%2C E-value 1.2e-10;gbkey=misc_feature;gene=SC5E9.07
NC_003888.3	RefSeq	gene	8590974	8591087	.	-	.	ID=gene7822;Dbxref=GeneID:1103197;Name=SC5E9.08c;gbkey=Gene;gene=SC5E9.08c;gene_biotype=protein_coding;gene_synonym=SC5E9.08c;locus_tag=SCO7760
NC_003888.3	RefSeq	CDS	8590974	8591087	.	-	0	ID=cds7684;Parent=gene7822;Dbxref=Genbank:NP_631793.1,GeneID:1103197;Name=NP_631793.1;Note=SC5E9.08c%2C partial CDS%2C possible oxidoreductase fragment%2C len: 38aa%3B similar to a region from many eg. SW:Q49117 (YMEC_METEX) hypothetical oxidoreductase from Methylobacterium extorquens (153 aa) fasta scores%3B opt: 139%2C z-score: 220.3%2C E(): 8.3e-05%2C 50.0%25 identity in 38 aa overlap. Contains Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus.;end_range=8591087,.;gbkey=CDS;gene=SC5E9.08c;partial=true;product=oxidoreductase fragment;protein_id=NP_631793.1;start_range=.,8590974;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8591001	8591075	.	-	.	ID=id10074;Dbxref=GeneID:1103197;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 14.90%2C E-value 0.02;gbkey=misc_feature;gene=SC5E9.08c
NC_003888.3	RefSeq	ribosome_entry_site	8591272	8591276	.	+	.	ID=id10075;gbkey=RBS
NC_003888.3	RefSeq	gene	8591283	8591942	.	+	.	ID=gene7823;Dbxref=GeneID:1103198;Name=SC5E9.09;gbkey=Gene;gene=SC5E9.09;gene_biotype=protein_coding;gene_synonym=SC5E9.09;locus_tag=SCO7761
NC_003888.3	RefSeq	CDS	8591283	8591942	.	+	0	ID=cds7685;Parent=gene7823;Dbxref=Genbank:NP_631794.1,GeneID:1103198;Name=NP_631794.1;Note=SC5E9.09%2C unknown%2C doubtful CDS%2C len: 219aa%3B appears to lie within a region of degraded DNA.;gbkey=CDS;gene=SC5E9.09;product=hypothetical protein;protein_id=NP_631794.1;transl_table=11
NC_003888.3	RefSeq	gene	8592094	8593056	.	+	.	ID=gene7824;Dbxref=GeneID:1103199;Name=SC5E9.10;gbkey=Gene;gene=SC5E9.10;gene_biotype=protein_coding;gene_synonym=SC5E9.10;locus_tag=SCO7762
NC_003888.3	RefSeq	CDS	8592094	8593056	.	+	0	ID=cds7686;Parent=gene7824;Dbxref=Genbank:NP_631795.1,GeneID:1103199;Name=NP_631795.1;Note=SC5E9.10%2C unknown%2C doubtful CDS%2C len: 320 aa%3B appears to lie within a region of degraded DNA.;gbkey=CDS;gene=SC5E9.10;product=hypothetical protein;protein_id=NP_631795.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8593341	8593345	.	+	.	ID=id10076;gbkey=RBS
NC_003888.3	RefSeq	gene	8593351	8594052	.	+	.	ID=gene7825;Dbxref=GeneID:1103200;Name=SC5E9.11;gbkey=Gene;gene=SC5E9.11;gene_biotype=protein_coding;gene_synonym=SC5E9.11;locus_tag=SCO7763
NC_003888.3	RefSeq	CDS	8593351	8594052	.	+	0	ID=cds7687;Parent=gene7825;Dbxref=Genbank:NP_631796.1,GeneID:1103200;Name=NP_631796.1;Note=SC5E9.11%2C possible membrane protein%2C len: 233aa%3B contains a possible membrane-spanning hydrophobic region.;gbkey=CDS;gene=SC5E9.11;product=hypothetical protein;protein_id=NP_631796.1;transl_table=11
NC_003888.3	RefSeq	gene	8594110	8594421	.	+	.	ID=gene7826;Dbxref=GeneID:1103201;Name=SC5E9.12;gbkey=Gene;gene=SC5E9.12;gene_biotype=protein_coding;gene_synonym=SC5E9.12;locus_tag=SCO7764
NC_003888.3	RefSeq	CDS	8594110	8594421	.	+	0	ID=cds7688;Parent=gene7826;Dbxref=Genbank:NP_631797.1,GeneID:1103201;Name=NP_631797.1;Note=SC5E9.12%2C unknown%2C len: 103 aa;gbkey=CDS;gene=SC5E9.12;product=hypothetical protein;protein_id=NP_631797.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8594992	8594999	.	+	.	ID=id10077;gbkey=RBS
NC_003888.3	RefSeq	gene	8595004	8595444	.	+	.	ID=gene7827;Dbxref=GeneID:1103202;Name=SC5E9.13;gbkey=Gene;gene=SC5E9.13;gene_biotype=protein_coding;gene_synonym=SC5E9.13;locus_tag=SCO7765
NC_003888.3	RefSeq	CDS	8595004	8595444	.	+	0	ID=cds7689;Parent=gene7827;Dbxref=Genbank:NP_631798.1,GeneID:1103202;Name=NP_631798.1;Note=SC5E9.13%2C possible transcriptional regulator%2C len: 146 aa%3B weak similar to many e.g. SW:P27245 (MARR_ECOLI) multiple antibiotic resistance protein MarR from Escherichia coli (125 aa) fasta scores%3B opt: 138%2C z-score: 184.9%2C E(): 0.0079%2C 26.5%25 identity in 117 aa overlap. Contains Pfam match to entry PF01047 MarR%2C MarR family and helix-turn-helix motif (Score 1478 (+4.22 SD)) at residue 43-64.;gbkey=CDS;gene=SC5E9.13;product=transcriptional regulator;protein_id=NP_631798.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8595082	8595390	.	+	.	ID=id10078;Dbxref=GeneID:1103202;Note=Pfam match to entry PF01047 MarR%2C MarR family%2C score 48.60%2C E-value 1.3e-10;gbkey=misc_feature;gene=SC5E9.13
NC_003888.3	RefSeq	ribosome_entry_site	8595516	8595522	.	+	.	ID=id10079;gbkey=RBS
NC_003888.3	RefSeq	gene	8595528	8596418	.	+	.	ID=gene7828;Dbxref=GeneID:1103203;Name=SC5E9.14;gbkey=Gene;gene=SC5E9.14;gene_biotype=protein_coding;gene_synonym=SC5E9.14;locus_tag=SCO7766
NC_003888.3	RefSeq	CDS	8595528	8596418	.	+	0	ID=cds7690;Parent=gene7828;Dbxref=Genbank:NP_631799.1,GeneID:1103203;Name=NP_631799.1;Note=SC5E9.14%2C conserved hypothetical protein%2C len: 296aa%3B similar to TR:Q53906 (EMBL:X58833) hypothetical protein from the actinorhodin biosynthetic gene cluster of Streptomyces coelicolor (294 aa) fasta scores%3B opt: 546%2C z-score: 609.8%2C E(): 1.7e-26%2C 39.2%25 identity in 288 aa overlap;gbkey=CDS;gene=SC5E9.14;product=hypothetical protein;protein_id=NP_631799.1;transl_table=11
NC_003888.3	RefSeq	gene	8596583	8597410	.	-	.	ID=gene7829;Dbxref=GeneID:1103204;Name=SC5E9.15c;gbkey=Gene;gene=SC5E9.15c;gene_biotype=protein_coding;gene_synonym=SC5E9.15c;locus_tag=SCO7767
NC_003888.3	RefSeq	CDS	8596583	8597410	.	-	0	ID=cds7691;Parent=gene7829;Dbxref=Genbank:NP_631800.1,GeneID:1103204;Name=NP_631800.1;Note=SC5E9.15c%2C possible DNA-binding protein%2C len: 275 aa%3B similar to many e.g. TR:Q9RD19 (EMBL:AL133422) DNA-binding protein from Streptomyces coelicolor (279 aa) fasta scores%3B opt: 510%2C z-score: 601.1%2C E(): 5.1e-26%2C 36.4%25 identity in 275 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix and a possible helix-turn-helix motif at residues 40..61 (+3.20 SD);gbkey=CDS;gene=SC5E9.15c;product=DNA-binding protein;protein_id=NP_631800.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8597153	8597317	.	-	.	ID=id10080;Dbxref=GeneID:1103204;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 22.70%2C E-value 0.0086;gbkey=misc_feature;gene=SC5E9.15c
NC_003888.3	RefSeq	ribosome_entry_site	8597530	8597535	.	+	.	ID=id10081;gbkey=RBS
NC_003888.3	RefSeq	gene	8597540	8597980	.	+	.	ID=gene7830;Dbxref=GeneID:1103205;Name=SC5E9.16;gbkey=Gene;gene=SC5E9.16;gene_biotype=protein_coding;gene_synonym=SC5E9.16;locus_tag=SCO7768
NC_003888.3	RefSeq	CDS	8597540	8597980	.	+	0	ID=cds7692;Parent=gene7830;Dbxref=Genbank:NP_631801.1,GeneID:1103205;Name=NP_631801.1;Note=SC5E9.16%2C conserved hypothetical protein%2C len: 146aa%3B similar to SW:O31511 (YESE_BACSU) hypothetical protein from Bacillus subtilis (147 aa) fasta scores%3B opt: 317%2C z-score: 427.2%2C E(): 2.5e-16%2C 35.7%25 identity in 126 aa overlap.;gbkey=CDS;gene=SC5E9.16;product=hypothetical protein;protein_id=NP_631801.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8597969	8597975	.	+	.	ID=id10082;Dbxref=GeneID:1103205;gbkey=RBS;gene=SC5E9.16
NC_003888.3	RefSeq	gene	8597980	8598822	.	+	.	ID=gene7831;Dbxref=GeneID:1103206;Name=SC5E9.17;gbkey=Gene;gene=SC5E9.17;gene_biotype=protein_coding;gene_synonym=SC5E9.17;locus_tag=SCO7769
NC_003888.3	RefSeq	CDS	8597980	8598822	.	+	0	ID=cds7693;Parent=gene7831;Dbxref=Genbank:NP_631802.1,GeneID:1103206;Name=NP_631802.1;Note=SC5E9.17%2C conserved hypothetical protein%2C len: 280 aa%3B similar to many e.g. TR:O31512 (EMBL:Z99107) hypothetical protein from Bacillus subtilis (286 aa) fasta scores%3B opt: 651%2C z-score: 727.7%2C E(): 0%2C 38.1%25 identity in 278 aa overlap;gbkey=CDS;gene=SC5E9.17;product=hypothetical protein;protein_id=NP_631802.1;transl_table=11
NC_003888.3	RefSeq	gene	8598830	8599405	.	+	.	ID=gene7832;Dbxref=GeneID:1103207;Name=SC5E9.18;gbkey=Gene;gene=SC5E9.18;gene_biotype=protein_coding;gene_synonym=SC5E9.18;locus_tag=SCO7770
NC_003888.3	RefSeq	CDS	8598830	8599405	.	+	0	ID=cds7694;Parent=gene7832;Dbxref=Genbank:NP_631803.1,GeneID:1103207;Name=NP_631803.1;Note=SC5E9.18%2C unknown%2C len: 191 aa%3B similar to a region from several predicted ATP/GTP-binding proteins eg. TR:O86768 (EMBL:AL031035) from Streptomyces coelicolor (886 aa) fasta scores%3B opt: 448%2C z-score: 543.2%2C E(): 8.6e-23%2C 44.2%25 identity in 172 aa overlap;gbkey=CDS;gene=SC5E9.18;product=hypothetical protein;protein_id=NP_631803.1;transl_table=11
NC_003888.3	RefSeq	gene	8599443	8599944	.	-	.	ID=gene7833;Dbxref=GeneID:1103208;Name=SC5E9.19c;gbkey=Gene;gene=SC5E9.19c;gene_biotype=pseudogene;gene_synonym=SC5E9.19c;locus_tag=SCO7771;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8599443	8599944	.	-	.	ID=id10083;Dbxref=GeneID:1103208;Note=SC5E9.19c%2C pseudogene%2C conserved hypothetical protein %3B similar to TR:O86679 (EMBL:AL031371) hypothetical protein from Streptomyces coelicolor (209 aa) fasta scores%3B opt: 324%2C z-score: 383.2%2C E(): 7.1e-14%2C 50.0%25 identity in 112 aa overlap.%3Bpseudogene%2C conserved hypothetical protein;gbkey=misc_feature;gene=SC5E9.19c
NC_003888.3	RefSeq	gene	8600297	8600881	.	-	.	ID=gene7834;Dbxref=GeneID:1103209;Name=SC5E9.20c;gbkey=Gene;gene=SC5E9.20c;gene_biotype=protein_coding;gene_synonym=SC5E9.20c;locus_tag=SCO7772
NC_003888.3	RefSeq	CDS	8600297	8600881	.	-	0	ID=cds7695;Parent=gene7834;Dbxref=Genbank:NP_631804.1,GeneID:1103209;Name=NP_631804.1;Note=SC5E9.20c%2C unknown%2C len: 194 aa;gbkey=CDS;gene=SC5E9.20c;product=hypothetical protein;protein_id=NP_631804.1;transl_table=11
NC_003888.3	RefSeq	gene	8601284	8601808	.	-	.	ID=gene7835;Dbxref=GeneID:1103210;Name=SC5E9.21c;gbkey=Gene;gene=SC5E9.21c;gene_biotype=protein_coding;gene_synonym=SC5E9.21c;locus_tag=SCO7773
NC_003888.3	RefSeq	CDS	8601284	8601808	.	-	0	ID=cds7696;Parent=gene7835;Dbxref=Genbank:NP_631805.1,GeneID:1103210;Name=NP_631805.1;Note=SC5E9.21c%2C conserved hypothetical protein%2C len: 174aa%3B weakly similar to many eg. TR:Q00818 (EMBL:M95287) hypothetical protein from plasmid IncN R46 of Salmonella typhimurium (162 aa) fasta scores%3B opt: 188%2C z-score: 238.9%2C E(): 7.7e-06%2C 29.3%25 identity in 157 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;gene=SC5E9.21c;product=hypothetical protein;protein_id=NP_631805.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8601377	8601628	.	-	.	ID=id10084;Dbxref=GeneID:1103210;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 17.70%2C E-value 0.11;gbkey=misc_feature;gene=SC5E9.21c
NC_003888.3	RefSeq	gene	8602543	8603184	.	+	.	ID=gene7836;Dbxref=GeneID:1103211;Name=SC5E9.22;gbkey=Gene;gene=SC5E9.22;gene_biotype=protein_coding;gene_synonym=SC5E9.22;locus_tag=SCO7774
NC_003888.3	RefSeq	CDS	8602543	8603184	.	+	0	ID=cds7697;Parent=gene7836;Dbxref=Genbank:NP_631806.1,GeneID:1103211;Name=NP_631806.1;Note=SC5E9.22%2C possible hypothetical protein%2C len: 213aa%3B region similar to many eg. SW:P96463 (ABFB_STRLI) alpha-L-arabinofuranosidase precursor from Streptomyces lividans (475 aa) fasta scores%3B opt: 171%2C z-score: 209.1%2C E(): 0.00036%2C 32.2%25 identity in 177 aa overlap. Contains a possible N-terminal signal sequence. Similar to neighbouring CDS SC5E9.23 fasta scores%3B opt: 371%2C z-score: 401.0%2C E(): 1.1e-16%2C 42.2%25 identity in 173 aa overlap.;gbkey=CDS;gene=SC5E9.22;product=hypothetical protein;protein_id=NP_631806.1;transl_table=11
NC_003888.3	RefSeq	gene	8603181	8603747	.	+	.	ID=gene7837;Dbxref=GeneID:1103212;Name=SC5E9.23;gbkey=Gene;gene=SC5E9.23;gene_biotype=protein_coding;gene_synonym=SC5E9.23;locus_tag=SCO7775
NC_003888.3	RefSeq	CDS	8603181	8603747	.	+	0	ID=cds7698;Parent=gene7837;Dbxref=Genbank:NP_631807.1,GeneID:1103212;Name=NP_631807.1;Note=SC5E9.23%2C possible hypothetical protein%2C len: 188aa%3B similar to regions from others eg. TR:Q9X583 (EMBL:AF121864) xylanase-arabinofuranosidase bifunctional enzyme from Streptomyces chattanoogensis (819 aa) fasta scores%3B opt: 198%2C z-score: 237.6%2C E(): 9.1e-06%2C 29.4%25 identity in 177 aa overlap. Contains possible N-terminal signal sequence and Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain. Similar to neighbouring CDS SC5E9.22 fasta scores%3B opt: 371%2C z-score: 401.0%2C E(): 1.1e-16%2C 42.2%25 identity in 173 aa overlap.;gbkey=CDS;gene=SC5E9.23;product=hypothetical protein;protein_id=NP_631807.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8603298	8603735	.	+	.	ID=id10085;Dbxref=GeneID:1103212;Note=Pfam match to entry PF00652 Ricin_B_lectin%2C Similarity to lectin domain of ricin beta-chain%2C 3 copies.%2C score 37.90%2C E-value 2.3e-07;gbkey=misc_feature;gene=SC5E9.23
NC_003888.3	RefSeq	gene	8604333	8604653	.	+	.	ID=gene7838;Dbxref=GeneID:1103213;Name=SC5E9.24;gbkey=Gene;gene=SC5E9.24;gene_biotype=protein_coding;gene_synonym=SC5E9.24;locus_tag=SCO7776
NC_003888.3	RefSeq	CDS	8604333	8604653	.	+	0	ID=cds7699;Parent=gene7838;Dbxref=Genbank:NP_631808.1,GeneID:1103213;Name=NP_631808.1;Note=SC5E9.24%2C unknown%2C len: 106 aa%3B some similarity to TR:Q9Z3X0 (EMBL:AF073359) 4-oxalocrotonate isomerase from Sphingomonas sp. DJ77 (77 aa) fasta scores%3B opt: 91%2C z-score: 135.8%2C E(): 4.3%2C 32.8%25 identity in 61 aa overlap.;gbkey=CDS;gene=SC5E9.24;product=hypothetical protein;protein_id=NP_631808.1;transl_table=11
NC_003888.3	RefSeq	gene	8604711	8605640	.	-	.	ID=gene7839;Dbxref=GeneID:1103214;Name=SC5E9.25c;gbkey=Gene;gene=SC5E9.25c;gene_biotype=protein_coding;gene_synonym=SC5E9.25c;locus_tag=SCO7777
NC_003888.3	RefSeq	CDS	8604711	8605640	.	-	0	ID=cds7700;Parent=gene7839;Dbxref=Genbank:NP_631809.1,GeneID:1103214;Name=NP_631809.1;Note=SC5E9.25c%2C possible hydrolase%2C len: 309aa%3B weakly similar to many eg. TR:O69356 (EMBL:D88016) 2-hydroxy-6-oxo-6-phenylhexa-2%2C4-dienoate hydrolase from Rhodococcus erythropolis (281 aa) fasta scores%3B opt: 206%2C z-score: 247.2%2C E(): 2.7e-06%2C 26.3%25 identity in 281 aa overlap.;gbkey=CDS;gene=SC5E9.25c;product=hydrolase;protein_id=NP_631809.1;transl_table=11
NC_003888.3	RefSeq	gene	8605797	8606564	.	+	.	ID=gene7840;Dbxref=GeneID:1103215;Name=SC5E9.26;gbkey=Gene;gene=SC5E9.26;gene_biotype=protein_coding;gene_synonym=SC5E9.26;locus_tag=SCO7778
NC_003888.3	RefSeq	CDS	8605797	8606564	.	+	0	ID=cds7701;Parent=gene7840;Dbxref=Genbank:NP_631810.1,GeneID:1103215;Name=NP_631810.1;Note=SC5E9.26%2C possible transcriptional regulator%2C len: 255 aa%3B similar to many e.g. SW:P15360 (GYLR_STRCO) glycerol operon regulatory protein from Streptomyces coelicolor (254 aa) fasta scores%3B opt: 217%2C z-score: 260.0%2C E(): 5.1e-07%2C 28.1%25 identity in 249 aa overlap and TR:O88025 (EMBL:AL031107) transcriptional regulator from Streptomyces coelicolor (264 aa) fasta scores%3B opt: 462%2C z-score: 543.0%2C E(): 9e-23%2C 40.5%25 identity in 242 aa overlap. Contains Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator.;gbkey=CDS;gene=SC5E9.26;product=transcriptional regulator;protein_id=NP_631810.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8606019	8606552	.	+	.	ID=id10086;Dbxref=GeneID:1103215;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 61.80%2C E-value 1.5e-14;gbkey=misc_feature;gene=SC5E9.26
NC_003888.3	RefSeq	gene	8606671	8607405	.	-	.	ID=gene7841;Dbxref=GeneID:1103216;Name=SC5E9.27c;gbkey=Gene;gene=SC5E9.27c;gene_biotype=protein_coding;gene_synonym=SC5E9.27c;locus_tag=SCO7779
NC_003888.3	RefSeq	CDS	8606671	8607405	.	-	0	ID=cds7702;Parent=gene7841;Dbxref=Genbank:NP_631811.1,GeneID:1103216;Name=NP_631811.1;Note=SC5E9.27c%2C possible oxidoreductase%2C len: 244aa%3B similar to many eg. SW:P16544 (ACT3_STRCO) ketoacyl reductase from Streptomyces coelicolor (261 aa) fasta scores%3B opt: 236%2C z-score: 270.7%2C E(): 1.3e-07%2C 31.3%25 identity in 233 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SC5E9.27c;product=oxidoreductase;protein_id=NP_631811.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8606812	8607393	.	-	.	ID=id10087;Dbxref=GeneID:1103216;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 8.70%2C E-value 3.6e-06;gbkey=misc_feature;gene=SC5E9.27c
NC_003888.3	RefSeq	gene	8607539	8608480	.	+	.	ID=gene7842;Dbxref=GeneID:1103217;Name=SC5E9.28;gbkey=Gene;gene=SC5E9.28;gene_biotype=protein_coding;gene_synonym=SC5E9.28;locus_tag=SCO7780
NC_003888.3	RefSeq	CDS	8607539	8608480	.	+	0	ID=cds7703;Parent=gene7842;Dbxref=Genbank:NP_631812.1,GeneID:1103217;Name=NP_631812.1;Note=SC5E9.28%2C possible transcriptional regulator%2C len: 313aa%3B strongly similar to TR:Q54308 (EMBL:X86780) helix-turn-helix DNA binding protein from Streptomyces hygroscopicus (330 aa) fasta scores%3B opt: 921%2C z-score: 1007.9%2C E(): 0%2C 50.5%25 identity in 309 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family and Prosite match to PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=CDS;gene=SC5E9.28;product=transcriptional regulator;protein_id=NP_631812.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8608193	8608456	.	+	.	ID=id10088;Dbxref=GeneID:1103217;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 88.00%2C E-value 1.9e-22;gbkey=misc_feature;gene=SC5E9.28
NC_003888.3	RefSeq	sequence_feature	8608301	8608435	.	+	.	ID=id10089;Dbxref=GeneID:1103217;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature;gene=SC5E9.28
NC_003888.3	RefSeq	gene	8608584	8608864	.	+	.	ID=gene7843;Dbxref=GeneID:1103218;Name=SC5E9.29;gbkey=Gene;gene=SC5E9.29;gene_biotype=pseudogene;gene_synonym=SC5E9.29;locus_tag=SCO7781;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8608584	8608864	.	+	.	ID=id10090;Dbxref=GeneID:1103218;Note=SC5E9.29%2C pseudogene%2C transposase remnant%3B similar to TR:Q9R2U8 (EMBL:AL133236) transposase from IS469 of Streptomyces coelicolor (501 aa) fasta scores%3B opt: 260%2C z-score: 378.0%2C E(): 1.6e-13%2C 80.0%25 identity in 50 aa overlap.%3Bpseudogene%2C transposase remnant;gbkey=misc_feature;gene=SC5E9.29
NC_003888.3	RefSeq	gene	8609130	8610347	.	+	.	ID=gene7844;Dbxref=GeneID:1103219;Name=SC5E9.30;gbkey=Gene;gene=SC5E9.30;gene_biotype=protein_coding;gene_synonym=SC5E9.30;locus_tag=SCO7782
NC_003888.3	RefSeq	CDS	8609130	8610347	.	+	0	ID=cds7704;Parent=gene7844;Dbxref=Genbank:NP_631813.1,GeneID:1103219;Name=NP_631813.1;Note=SC5E9.30%2C probable IS110 transposase%2C len: 405aa%3B identical to SW:P19780 (YIS1_STRCO) insertion element IS110 hypothetical 43.6 kDa protein from Streptomyces coelicolor. Contains Pfam match to entry PF01548 Transposase_9%2C Transposase.;gbkey=CDS;gene=SC5E9.30;product=IS110 transposase;protein_id=NP_631813.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8609355	8609651	.	+	.	ID=id10091;Dbxref=GeneID:1103219;Note=Pfam match to entry PF01548 Transposase_9%2C Transposase%2C score 142.40%2C E-value 7.9e-39;gbkey=misc_feature;gene=SC5E9.30
NC_003888.3	RefSeq	gene	8610407	8610638	.	+	.	ID=gene7845;Dbxref=GeneID:1103220;Name=SC5E9.31;gbkey=Gene;gene=SC5E9.31;gene_biotype=pseudogene;gene_synonym=SC5E9.31;locus_tag=SCO7783;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8610407	8610638	.	+	.	ID=id10092;Dbxref=GeneID:1103220;Note=SC5E9.31%2C pseudogene%2C transposase remnant%3B similar to TR:Q9R2U8 (EMBL:AL133236) transposase from IS469 of Streptomyces coelicolor (501 aa) fasta scores%3B opt: 188%2C z-score: 311.3%2C E(): 8.2e-10%2C 78.9%25 identity in 38 aa overlap.%3Bpseudogene%2C transposase remnant;gbkey=misc_feature;gene=SC5E9.31
NC_003888.3	RefSeq	ribosome_entry_site	8610840	8610845	.	+	.	ID=id10093;gbkey=RBS
NC_003888.3	RefSeq	gene	8610851	8611627	.	+	.	ID=gene7846;Dbxref=GeneID:1103221;Name=SC5E9.32;gbkey=Gene;gene=SC5E9.32;gene_biotype=protein_coding;gene_synonym=SC5E9.32;locus_tag=SCO7784
NC_003888.3	RefSeq	CDS	8610851	8611627	.	+	0	ID=cds7705;Parent=gene7846;Dbxref=Genbank:NP_631814.1,GeneID:1103221;Name=NP_631814.1;Note=SC5E9.32%2C possible oxidoreductase%2C len: 258aa%3B similar to many eg. SW:P39605 (NFRA_BACSU) nitro/flavin reductase from Bacillus subtilis (249 aa) fasta scores%3B opt: 426%2C z-score: 490.0%2C E(): 8e-20%2C 32.7%25 identity in 257 aa overlap. Contains Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family.;gbkey=CDS;gene=SC5E9.32;product=oxidoreductase;protein_id=NP_631814.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8610869	8611399	.	+	.	ID=id10094;Dbxref=GeneID:1103221;Note=Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family%2C score 75.00%2C E-value 1.5e-18;gbkey=misc_feature;gene=SC5E9.32
NC_003888.3	RefSeq	gene	8611643	8612263	.	+	.	ID=gene7847;Dbxref=GeneID:1103222;Name=SC5E9.33;gbkey=Gene;gene=SC5E9.33;gene_biotype=protein_coding;gene_synonym=SC5E9.33;locus_tag=SCO7785
NC_003888.3	RefSeq	CDS	8611643	8612263	.	+	0	ID=cds7706;Parent=gene7847;Dbxref=Genbank:NP_631815.1,GeneID:1103222;Name=NP_631815.1;Note=SC5E9.33%2C possible transcriptional regulator%2C len: 206 aa%3B weakly similar to many eg. TR:Q9S250 (EMBL:AL096811)  transcriptional regulator from Streptomyces coelicolor (213 aa) fasta scores%3B opt: 159%2C z-score: 199.4%2C E(): 0.0012%2C 25.7%25 identity in 171 aa overlap. Contains helix-turn-helix motif (Score 1164 (+3.15 SD)) at residue 33-54. Note possible alternative downstream start sites.;gbkey=CDS;gene=SC5E9.33;product=transcriptional regulator;protein_id=NP_631815.1;transl_table=11
NC_003888.3	RefSeq	gene	8612498	8613085	.	-	.	ID=gene7848;Dbxref=GeneID:1103223;Name=SC5E9.34c;gbkey=Gene;gene=SC5E9.34c;gene_biotype=protein_coding;gene_synonym=SC5E9.34c;locus_tag=SCO7786
NC_003888.3	RefSeq	CDS	8612498	8613085	.	-	0	ID=cds7707;Parent=gene7848;Dbxref=Genbank:NP_631816.1,GeneID:1103223;Name=NP_631816.1;Note=SC5E9.34c%2C unknown%2C len: 195 aa%3B regions of weak similarity to transposases eg. TR:Q9RBZ3 (EMBL:AF169828) from Pseudomonas syringae (pv. glycinea) (357 aa) fasta scores%3B opt: 158%2C z-score: 201.5%2C E(): 0.00093%2C 26.7%25 identity in 135 aa overlap.;gbkey=CDS;gene=SC5E9.34c;product=hypothetical protein;protein_id=NP_631816.1;transl_table=11
NC_003888.3	RefSeq	gene	8613473	8613841	.	-	.	ID=gene7849;Dbxref=GeneID:1103224;Name=SC5E9.35c;gbkey=Gene;gene=SC5E9.35c;gene_biotype=protein_coding;gene_synonym=SC5E9.35c;locus_tag=SCO7787
NC_003888.3	RefSeq	CDS	8613473	8613841	.	-	0	ID=cds7708;Parent=gene7849;Dbxref=Genbank:NP_631817.1,GeneID:1103224;Name=NP_631817.1;Note=SC5E9.35c%2C unknown%2C len: 122 aa;gbkey=CDS;gene=SC5E9.35c;product=hypothetical protein;protein_id=NP_631817.1;transl_table=11
NC_003888.3	RefSeq	gene	8613848	8614045	.	-	.	ID=gene7850;Dbxref=GeneID:1103225;Name=SC5E9.36c;gbkey=Gene;gene=SC5E9.36c;gene_biotype=protein_coding;gene_synonym=SC5E9.36c;locus_tag=SCO7788
NC_003888.3	RefSeq	CDS	8613848	8614045	.	-	0	ID=cds7709;Parent=gene7850;Dbxref=Genbank:NP_631818.1,GeneID:1103225;Name=NP_631818.1;Note=SC5E9.36c%2C membrane protein%2C len: 65 aa. Contains possible hydrophobic membrane spanning regions;gbkey=CDS;gene=SC5E9.36c;product=hypothetical protein;protein_id=NP_631818.1;transl_table=11
NC_003888.3	RefSeq	gene	8614151	8614369	.	-	.	ID=gene7851;Dbxref=GeneID:1103226;Name=SC5E9.37c;gbkey=Gene;gene=SC5E9.37c;gene_biotype=protein_coding;gene_synonym=SC5E9.37c;locus_tag=SCO7789
NC_003888.3	RefSeq	CDS	8614151	8614369	.	-	0	ID=cds7710;Parent=gene7851;Dbxref=Genbank:NP_631819.1,GeneID:1103226;Name=NP_631819.1;Note=SC5E9.37c%2C unknown%2C len: 72 aa;gbkey=CDS;gene=SC5E9.37c;product=hypothetical protein;protein_id=NP_631819.1;transl_table=11
NC_003888.3	RefSeq	gene	8614384	8614620	.	-	.	ID=gene7852;Dbxref=GeneID:1103227;Name=SC5E9.39c;gbkey=Gene;gene=SC5E9.39c;gene_biotype=protein_coding;gene_synonym=SC5E9.39c;locus_tag=SCO7790
NC_003888.3	RefSeq	CDS	8614384	8614620	.	-	0	ID=cds7711;Parent=gene7852;Dbxref=Genbank:NP_631820.1,GeneID:1103227;Name=NP_631820.1;Note=SC5E9.39c%2C possible killer toxin-like protein%2C len: 78 aa%3B similar to SKLP (Streptomyces killer toxin-like protein) from Streptomyces sp. F-287 (Ohki et al. (2001) J. Mol. Biol. 305%2C 109-120). No TREMBL submission. Protein isolated from culture supernatent and shown to exhibit cytocidal effects on both budding and fission yeasts.;gbkey=CDS;gene=SC5E9.39c;product=oxidoreductase;protein_id=NP_631820.1;transl_table=11
NC_003888.3	RefSeq	gene	8614845	8616050	.	-	.	ID=gene7853;Dbxref=GeneID:1103228;Name=SC5E9.38c;gbkey=Gene;gene=SC5E9.38c;gene_biotype=protein_coding;gene_synonym=SC5E9.38c;locus_tag=SCO7791
NC_003888.3	RefSeq	CDS	8614845	8616050	.	-	0	ID=cds7712;Parent=gene7853;Dbxref=Genbank:NP_631821.1,GeneID:1103228;Name=NP_631821.1;Note=SC5E9.38c%2C possible  oxidoreductase%2C len: 401 aa%3B similar to many e.g. TR:O53772 (EMBL:AL021942) oxidoreductase from Mycobacterium tuberculosis (388 aa) fasta scores%3B opt: 524%2C z-score: 584.4%2C E(): 4.4e-25%2C 32.4%25 identity in 373 aa overlap. Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase.;gbkey=CDS;gene=SC5E9.38c;product=oxidoreductase;protein_id=NP_631821.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8614995	8615591	.	-	.	ID=id10095;Dbxref=GeneID:1103228;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 85.70%2C E-value 9.2e-22;gbkey=misc_feature;gene=SC5E9.38c
NC_003888.3	RefSeq	gene	8616047	8617276	.	-	.	ID=gene7854;Dbxref=GeneID:1103229;Name=SC10B8A.01c;gbkey=Gene;gene=SC10B8A.01c;gene_biotype=protein_coding;gene_synonym=SC10B8A.01c;locus_tag=SCO7791a
NC_003888.3	RefSeq	CDS	8616047	8617276	.	-	0	ID=cds7713;Parent=gene7854;Dbxref=Genbank:NP_631822.1,GeneID:1103229;Name=NP_631822.1;Note=SC10B8A.01c%2C possible  oxidoreductase%2C len: 409 aa%3B similar to TR:O53772 (EMBL:AL021942) oxidoreductase from Mycobacterium tuberculosis (388 aa) fasta scores%3B opt: 305%2C z-score: 305.8%2C E(): 1.5e-09%2C 31.6%25 identity in 358 aa overlap. Contains Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase.;gbkey=CDS;gene=SC10B8A.01c;product=oxidoreductase;protein_id=NP_631822.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8616249	8616808	.	-	.	ID=id10096;Dbxref=GeneID:1103229;Note=Pfam match to entry PF01360 Monooxygenase%2C Monooxygenase%2C score 5.00%2C E-value 2.8e-05;gbkey=misc_feature;gene=SC10B8A.01c
NC_003888.3	RefSeq	gene	8617566	8617886	.	-	.	ID=gene7855;Dbxref=GeneID:1103230;Name=SC10B8A.02c;gbkey=Gene;gene=SC10B8A.02c;gene_biotype=protein_coding;gene_synonym=SC10B8A.02c;locus_tag=SCO7792
NC_003888.3	RefSeq	CDS	8617566	8617886	.	-	0	ID=cds7714;Parent=gene7855;Dbxref=Genbank:NP_631823.1,GeneID:1103230;Name=NP_631823.1;Note=SC10B8A.02c%2C unknown%2C doubtful CDS%2C len: 106 aa;gbkey=CDS;gene=SC10B8A.02c;product=hypothetical protein;protein_id=NP_631823.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8617892	8617897	.	-	.	ID=id10097;gbkey=RBS
NC_003888.3	RefSeq	gene	8617943	8618245	.	-	.	ID=gene7856;Dbxref=GeneID:1103231;Name=SC10B8A.03c;gbkey=Gene;gene=SC10B8A.03c;gene_biotype=protein_coding;gene_synonym=SC10B8A.03c;locus_tag=SCO7793
NC_003888.3	RefSeq	CDS	8617943	8618245	.	-	0	ID=cds7715;Parent=gene7856;Dbxref=Genbank:NP_631824.1,GeneID:1103231;Name=NP_631824.1;Note=SC10B8A.03c%2C unknown%2C doubtful CDS%2C len: 100 aa;gbkey=CDS;gene=SC10B8A.03c;product=hypothetical protein;protein_id=NP_631824.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8618254	8618259	.	-	.	ID=id10098;gbkey=RBS
NC_003888.3	RefSeq	ribosome_entry_site	8618301	8618306	.	+	.	ID=id10099;gbkey=RBS
NC_003888.3	RefSeq	gene	8618313	8618951	.	+	.	ID=gene7857;Dbxref=GeneID:1103232;Name=SC10B8A.04;gbkey=Gene;gene=SC10B8A.04;gene_biotype=protein_coding;gene_synonym=SC10B8A.04;locus_tag=SCO7794
NC_003888.3	RefSeq	CDS	8618313	8618951	.	+	0	ID=cds7716;Parent=gene7857;Dbxref=Genbank:NP_631825.1,GeneID:1103232;Name=NP_631825.1;Note=SC10B8A.04%2C possible TetR-family transcriptional regulator%2C len: 212 aa%3B similar to many e.g. SW:P03039 (TER3_ECOLI) tetracycline repressor protein class C from Escherichia coli (219 aa) fasta scores%3B opt: 358%2C z-score: 432.3%2C E(): 1.3e-16%2C 36.4%25 identity in 217 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and helix-turn-helix motif at residue 26-47 (Score 1166 (+3.16 SD)).;gbkey=CDS;gene=SC10B8A.04;product=TetR family transcriptional regulator;protein_id=NP_631825.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8618340	8618480	.	+	.	ID=id10100;Dbxref=GeneID:1103232;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 60.60%2C E-value 3.4e-14;gbkey=misc_feature;gene=SC10B8A.04
NC_003888.3	RefSeq	gene	8618974	8619171	.	+	.	ID=gene7858;Dbxref=GeneID:1103233;Name=SC10B8A.05;gbkey=Gene;gene=SC10B8A.05;gene_biotype=protein_coding;gene_synonym=SC10B8A.05;locus_tag=SCO7795
NC_003888.3	RefSeq	CDS	8618974	8619171	.	+	0	ID=cds7717;Parent=gene7858;Dbxref=Genbank:NP_631826.1,GeneID:1103233;Name=NP_631826.1;Note=SC10B8A.05%2C transposase%2C partial CDS%2C len: 66aa%3B similar to TR:AAF31487 (EMBL:AF071515) transposase (fragment) from Streptomyces noursei (117 aa) fasta scores%3B opt: 339%2C z-score: 459.2%2C E(): 4.1e-18%2C 73.8%25 identity in 65 aa overlap.;end_range=8619171,.;gbkey=CDS;gene=SC10B8A.05;partial=true;product=transposase;protein_id=NP_631826.1;start_range=.,8618974;transl_table=11
NC_003888.3	RefSeq	repeat_region	8619197	8619237	.	+	.	ID=id10101;Note=Inverted and repeated at 4183..4223;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	8619397	8619400	.	+	.	ID=id10102;gbkey=RBS
NC_003888.3	RefSeq	gene	8619410	8620069	.	+	.	ID=gene7859;Dbxref=GeneID:1103234;Name=SC10B8A.06;gbkey=Gene;gene=SC10B8A.06;gene_biotype=protein_coding;gene_synonym=SC10B8A.06;locus_tag=SCO7796
NC_003888.3	RefSeq	CDS	8619410	8620069	.	+	0	ID=cds7718;Parent=gene7859;Dbxref=Genbank:NP_631827.1,GeneID:1103234;Name=NP_631827.1;Note=SC10B8A.06%2C unknown%2C len: 219 aa%3B located between inverted DNA repeat units.;gbkey=CDS;gene=SC10B8A.06;product=hypothetical protein;protein_id=NP_631827.1;transl_table=11
NC_003888.3	RefSeq	gene	8620088	8620228	.	+	.	ID=gene7860;Dbxref=GeneID:1103235;Name=SC10B8A.07;gbkey=Gene;gene=SC10B8A.07;gene_biotype=protein_coding;gene_synonym=SC10B8A.07;locus_tag=SCO7797
NC_003888.3	RefSeq	CDS	8620088	8620228	.	+	0	ID=cds7719;Parent=gene7860;Dbxref=Genbank:NP_631828.1,GeneID:1103235;Name=NP_631828.1;Note=SC10B8A.07%2C possible transposase fragment%2C partial CDS%2C len: 46aa%3B similar to c-terminus of TR:O52240 (EMBL:AF109404) transposase from Streptomyces scabies (431 aa) fasta scores%3B opt: 80%2C z-score: 133.8%2C E(): 5.5%2C 42.5%25 identity in 40 aa overlap. Located between inverted DNA repeat units.;gbkey=CDS;gene=SC10B8A.07;product=transposase;protein_id=NP_631828.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8620226	8620266	.	+	.	ID=id10103;Note=Inverted and repeated at 3154..3194;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8620339	8620857	.	-	.	ID=gene7861;Dbxref=GeneID:1103236;Name=SC10B8A.08c;gbkey=Gene;gene=SC10B8A.08c;gene_biotype=protein_coding;gene_synonym=SC10B8A.08c;locus_tag=SCO7798
NC_003888.3	RefSeq	CDS	8620339	8620857	.	-	0	ID=cds7720;Parent=gene7861;Dbxref=Genbank:NP_631829.1,GeneID:1103236;Name=NP_631829.1;Note=SC10B8A.08c%2C possible transposase%2C len: 172aa%3B similar to many eg. TR:O69928 (EMBL:AL023861) transposase from Streptomyces coelicolor (152 aa) fasta scores%3B opt: 604%2C z-score: 704.2%2C E(): 9.3e-32%2C 62.7%25 identity in 150 aa overlap. Overlaps with neighbouring CDS SC10B8A.09c transposase. Contains TTA encoded leucine residue%2C possible target for bldA regulation.;gbkey=CDS;gene=SC10B8A.08c;product=transposase;protein_id=NP_631829.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8620528	8620530	.	-	.	ID=id10104;Dbxref=GeneID:1103236;Note=Leucine codon TTA%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC10B8A.08c
NC_003888.3	RefSeq	gene	8620776	8621255	.	-	.	ID=gene7862;Dbxref=GeneID:1103237;Name=SC10B8A.09c;gbkey=Gene;gene=SC10B8A.09c;gene_biotype=protein_coding;gene_synonym=SC10B8A.09c;locus_tag=SCO7799
NC_003888.3	RefSeq	CDS	8620776	8621255	.	-	0	ID=cds7721;Parent=gene7862;Dbxref=Genbank:NP_631830.1,GeneID:1103237;Name=NP_631830.1;Note=SC10B8A.09c%2C possible transposase%2C len: 159aa%3B similar to many eg. TR:O69927 (EMBL:AL023861) transposase from Streptomyces coelicolor (152 aa) fasta scores%3B opt: 400%2C z-score: 481.0%2C E(): 2.5e-19%2C 59.6%25 identity in 104 aa overlap. Contains Pfam match to entry PF01511 Transposase_6%2C Transposase. Overlaps with neighbouring CDS SC10B8A.08c transposase.;gbkey=CDS;gene=SC10B8A.09c;product=transposase;protein_id=NP_631830.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8620932	8621165	.	-	.	ID=id10105;Dbxref=GeneID:1103237;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 4.00%2C E-value 0.00025;gbkey=misc_feature;gene=SC10B8A.09c
NC_003888.3	RefSeq	gene	8621285	8621500	.	+	.	ID=gene7863;Dbxref=GeneID:1103238;Name=SC10B8A.10;gbkey=Gene;gene=SC10B8A.10;gene_biotype=protein_coding;gene_synonym=SC10B8A.10;locus_tag=SCO7800
NC_003888.3	RefSeq	CDS	8621285	8621500	.	+	0	ID=cds7722;Parent=gene7863;Dbxref=Genbank:NP_631831.1,GeneID:1103238;Name=NP_631831.1;Note=SC10B8A.10%2C unknown%2C doubtful CDS%2C len: 71 aa;gbkey=CDS;gene=SC10B8A.10;product=hypothetical protein;protein_id=NP_631831.1;transl_table=11
NC_003888.3	RefSeq	gene	8621520	8621900	.	+	.	ID=gene7864;Dbxref=GeneID:1103239;Name=SC10B8A.11;gbkey=Gene;gene=SC10B8A.11;gene_biotype=protein_coding;gene_synonym=SC10B8A.11;locus_tag=SCO7801
NC_003888.3	RefSeq	CDS	8621520	8621900	.	+	0	ID=cds7723;Parent=gene7864;Dbxref=Genbank:NP_631832.1,GeneID:1103239;Name=NP_631832.1;Note=SC10B8A.11%2C possible membrane protein%2C len: 126aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=SC10B8A.11;product=hypothetical protein;protein_id=NP_631832.1;transl_table=11
NC_003888.3	RefSeq	gene	8622062	8623126	.	+	.	ID=gene7865;Dbxref=GeneID:1103240;Name=SC10B8A.12;gbkey=Gene;gene=SC10B8A.12;gene_biotype=pseudogene;gene_synonym=SC10B8A.12;locus_tag=SCO7802;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8622062	8623126	.	+	.	ID=id10106;Dbxref=GeneID:1103240;Note=SC10B8A.12%2C possible pseudogene%2C unknown%2C len: 355 aa;gbkey=misc_feature;gene=SC10B8A.12
NC_003888.3	RefSeq	sequence_feature	8623113	8624190	.	+	.	ID=id10107;Note=Insertion element.;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	8623113	8623149	.	+	.	ID=id10108;Note=Inverted and repeated at 8111..8147. Bounds insertion element.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8623230	8624186	.	+	.	ID=gene7866;Dbxref=GeneID:1103241;Name=SC10B8A.13;gbkey=Gene;gene=SC10B8A.13;gene_biotype=protein_coding;gene_synonym=SC10B8A.13;locus_tag=SCO7803
NC_003888.3	RefSeq	CDS	8623230	8624186	.	+	0	ID=cds7724;Parent=gene7866;Dbxref=Genbank:NP_631833.1,GeneID:1103241;Name=NP_631833.1;Note=SC10B8A.13%2C possible insertion element transposase%2C len: 318aa%3B similar to many eg. TR:O86023 (EMBL:AF079817) transposase from plasmid pCS1 of Clavibacter michiganensis subsp. sepedonicus (320 aa) fasta scores%3B opt: 965%2C z-score: 1123.9%2C E(): 0%2C 50.6%25 identity in 316 aa overlap. Also identical to others from Streptomyces coelicolor eg. SCF41.27%2C TR:Q9RJU2 (EMBL:AL117387). Contains Pfam match to entry PF00665 rve%2C Integrase core domain.;gbkey=CDS;gene=SC10B8A.13;product=insertion element transposase;protein_id=NP_631833.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8623617	8624162	.	+	.	ID=id10109;Dbxref=GeneID:1103241;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 159.10%2C E-value 7.5e-45;gbkey=misc_feature;gene=SC10B8A.13
NC_003888.3	RefSeq	repeat_region	8624154	8624190	.	+	.	ID=id10110;Note=Inverted and repeated at 7070..7106. Bounds insertion element.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8625198	8625431	.	+	.	ID=gene7867;Dbxref=GeneID:1103242;Name=SC10B8A.14;gbkey=Gene;gene=SC10B8A.14;gene_biotype=protein_coding;gene_synonym=SC10B8A.14,SC8E7.01;locus_tag=SCO7804
NC_003888.3	RefSeq	CDS	8625198	8625431	.	+	0	ID=cds7725;Parent=gene7867;Dbxref=Genbank:NP_733744.1,GeneID:1103242;Name=NP_733744.1;Note=SC8E7.01%2C possible membrane protein%2C partial CDS%2C len: >59 aa. Contains possible membrane spanning hydrophobic domains.~SC10B8A.14%2C unknown%2C len: 59aa;gbkey=CDS;gene=SC10B8A.14;product=hypothetical protein;protein_id=NP_733744.1;transl_table=11
NC_003888.3	RefSeq	gene	8625511	8625846	.	+	.	ID=gene7868;Dbxref=GeneID:1103243;Name=SC8E7.02;gbkey=Gene;gene=SC8E7.02;gene_biotype=protein_coding;gene_synonym=SC8E7.02;locus_tag=SCO7805
NC_003888.3	RefSeq	CDS	8625511	8625846	.	+	0	ID=cds7726;Parent=gene7868;Dbxref=Genbank:NP_631834.1,GeneID:1103243;Name=NP_631834.1;Note=SC8E7.02%2C doubtful CDS%2C len: 111 aa.;gbkey=CDS;gene=SC8E7.02;product=hypothetical protein;protein_id=NP_631834.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8625794	8626228	.	+	.	ID=id10111;Note=shares 74.65%25 identity in 434 nt overlap with repeated sequence 13658..14090;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8626338	8627069	.	-	.	ID=gene7869;Dbxref=GeneID:1103244;Name=SC8E7.03c;gbkey=Gene;gene=SC8E7.03c;gene_biotype=protein_coding;gene_synonym=SC8E7.03c;locus_tag=SCO7806
NC_003888.3	RefSeq	CDS	8626338	8627069	.	-	0	ID=cds7727;Parent=gene7869;Dbxref=Genbank:NP_631835.1,GeneID:1103244;Name=NP_631835.1;Note=SC8E7.03c%2C possible DNA-binding protein%2C len: 243 aa. Weakly similar to several including: Streptomyces ambofaciens protein of unknown function found within the SrmR regulatory locus TR:Q00510 (EMBL:X63451) SrmX (239 aa)%2C fasta scores opt: 167 z-score: 217.0 E(): 0.00013 30.9%25 identity in 220 aa overlap and Deinococcus radiodurans TR:Q9RTS7 (EMBL:AE002009) N-methyl-transferase-related protein (249 aa)%2C fasta scores opt: 160 z-score: 208.0 E(): 0.00041 27.1%25 identity in 214 aa overlap. Contains a helix-turn-helix motif situated between residues 60..81 (+3.06 SD).;gbkey=CDS;gene=SC8E7.03c;product=DNA-binding protein;protein_id=NP_631835.1;transl_table=11
NC_003888.3	RefSeq	gene	8627077	8627355	.	-	.	ID=gene7870;Dbxref=GeneID:1103245;Name=SC8E7.04c;gbkey=Gene;gene=SC8E7.04c;gene_biotype=protein_coding;gene_synonym=SC8E7.04c;locus_tag=SCO7807
NC_003888.3	RefSeq	CDS	8627077	8627355	.	-	0	ID=cds7728;Parent=gene7870;Dbxref=Genbank:NP_631836.1,GeneID:1103245;Name=NP_631836.1;Note=SC8E7.04c%2C unknown%2C len: 92 aa. Contains 2 TTA leucine codons%2C possible targets for bldA regulation;gbkey=CDS;gene=SC8E7.04c;product=hypothetical protein;protein_id=NP_631836.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8627080	8627082	.	-	.	ID=id10112;Dbxref=GeneID:1103245;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC8E7.04c
NC_003888.3	RefSeq	sequence_feature	8627101	8627103	.	-	.	ID=id10113;Dbxref=GeneID:1103245;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC8E7.04c
NC_003888.3	RefSeq	gene	8627358	8627651	.	-	.	ID=gene7871;Dbxref=GeneID:1103246;Name=SC8E7.05c;gbkey=Gene;gene=SC8E7.05c;gene_biotype=protein_coding;gene_synonym=SC8E7.05c;locus_tag=SCO7808
NC_003888.3	RefSeq	CDS	8627358	8627651	.	-	0	ID=cds7729;Parent=gene7871;Dbxref=Genbank:NP_631837.1,GeneID:1103246;Name=NP_631837.1;Note=SC8E7.05c%2C unknown%2C len: 97 aa. Highly similar to the N-terminal of Streptomyces coelicolor mini-circle transposase for IS11 SW:YM3_STRCO (EMBL:X15942) SC3C8.19 (414 aa)%2C fasta scores opt: 239 z-score: 303.4 E(): 2e-09 44.6%25 identity in 92 aa overlap.;gbkey=CDS;gene=SC8E7.05c;product=hypothetical protein;protein_id=NP_631837.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8627658	8627662	.	-	.	ID=id10114;gbkey=RBS
NC_003888.3	RefSeq	gene	8628356	8628988	.	-	.	ID=gene7872;Dbxref=GeneID:1103247;Name=SC8E7.06c;gbkey=Gene;gene=SC8E7.06c;gene_biotype=protein_coding;gene_synonym=SC8E7.06c;locus_tag=SCO7809
NC_003888.3	RefSeq	CDS	8628356	8628988	.	-	0	ID=cds7730;Parent=gene7872;Dbxref=Genbank:NP_631838.1,GeneID:1103247;Name=NP_631838.1;Note=SC8E7.06%2C possible TetR-family transcriptional regulator%2C len: 210 aa. Similar to several other members of the TetR-family e.g. Streptomyces glaucescens SW:TCMR_STRGA (EMBL:M80674) tetracenomycin C transcriptional repressor%2C TcmR (226 aa)%2C fasta scores opt: 187 z-score: 235.6 E(): 1.2e-05 26.4%25 identity in 197 aa overlap and Streptomyces coelicolor TR:CAB88457 (EMBL:AL353815) TetR-family transcriptional regulator%2C SCD6.28 (215 aa)%2C fasta scores opt: 239 z-score: 298.6 E(): 3.7e-09 32.0%25 identity in 178 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the  helix-turn-helix motif situated between residues 36..57 (+5.84 SD).;gbkey=CDS;gene=SC8E7.06c;product=TetR family transcriptional regulator;protein_id=NP_631838.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8628797	8628916	.	-	.	ID=id10115;Dbxref=GeneID:1103247;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 57.90%2C E-value 2e-13;gbkey=misc_feature;gene=SC8E7.06c
NC_003888.3	RefSeq	gene	8629040	8629804	.	+	.	ID=gene7873;Dbxref=GeneID:1103248;Name=SC8E7.07;gbkey=Gene;gene=SC8E7.07;gene_biotype=protein_coding;gene_synonym=SC8E7.07;locus_tag=SCO7810
NC_003888.3	RefSeq	CDS	8629040	8629804	.	+	0	ID=cds7731;Parent=gene7873;Dbxref=Genbank:NP_631839.1,GeneID:1103248;Name=NP_631839.1;Note=SC8E7.07%2C possible oxidoreductase%2C len: 254 aa. Highly similar to many reductases e.g. Streptomyces coelicolor TR:O86853(EMBL:AJ007731) 3-ketoacyl-ACP/CoA reductase (244 aa)%2C fasta scores opt:777 z-score: 840.5 E():0 51.2%25 identity in 244 aa overlap. Contains a Pfam matches to entries PF00106 adh_short%2C short chain dehydrogenase and PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus.;gbkey=CDS;gene=SC8E7.07;product=oxidoreductase;protein_id=NP_631839.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8629070	8629615	.	+	.	ID=id10116;Dbxref=GeneID:1103248;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 125.00%2C E-value 1.4e-33;gbkey=misc_feature;gene=SC8E7.07
NC_003888.3	RefSeq	sequence_feature	8629679	8629771	.	+	.	ID=id10117;Dbxref=GeneID:1103248;Note=Pfam match to entry PF00678 adh_short_C2%2C Short chain dehydrogenase/reductase C-terminus%2C score 49.90%2C E-value 1.6e-12;gbkey=misc_feature;gene=SC8E7.07
NC_003888.3	RefSeq	gene	8630050	8630430	.	-	.	ID=gene7874;Dbxref=GeneID:1103249;Name=SC8E7.08c;gbkey=Gene;gene=SC8E7.08c;gene_biotype=protein_coding;gene_synonym=SC8E7.08c;locus_tag=SCO7811
NC_003888.3	RefSeq	CDS	8630050	8630430	.	-	0	ID=cds7732;Parent=gene7874;Dbxref=Genbank:NP_631840.1,GeneID:1103249;Name=NP_631840.1;Note=SC8E7.08c%2C possible membrane protein%2C len: 126 aa. Weakly similar to several e.g. Streptomyces coelicolor TR:Q9RJS0(EMBL:AL132707) probable integral membrane protein%2C SCF51.15C (201 aa)%2C fasta scores opt: 106 z-score: 142.5 E():1.8 33.7%25 identity in 104 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8E7.08c;product=hypothetical protein;protein_id=NP_631840.1;transl_table=11
NC_003888.3	RefSeq	gene	8630427	8631386	.	-	.	ID=gene7875;Dbxref=GeneID:1103250;Name=SC8E7.09c;gbkey=Gene;gene=SC8E7.09c;gene_biotype=protein_coding;gene_synonym=SC8E7.09c;locus_tag=SCO7812
NC_003888.3	RefSeq	CDS	8630427	8631386	.	-	0	ID=cds7733;Parent=gene7875;Dbxref=Genbank:NP_631841.1,GeneID:1103250;Name=NP_631841.1;Note=SC8E7.09c%2C possible insertion element transposase%2C len: 319 aa. Highly similar to many e.g. Streptomyces coelicolor TR:Q9R319(EMBL:AL133236) IS470 transposase (275 aa)%2C fasta scores opt: 169 z-score: 203.4 E(): 0.00074 30.7%25 identity in 231 aa overlap. Contains a helix-turn-helix motif situated between residues 44..65 (+3.17 SD) and a TTA /leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SC8E7.09c;product=insertion element transposase;protein_id=NP_631841.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8630492	8630528	.	+	.	ID=id10118;Note=inverted repeat unit which is 91 %25 identical over 37 nt to complement(6262..6298).;gbkey=repeat_region
NC_003888.3	RefSeq	sequence_feature	8630892	8630894	.	-	.	ID=id10119;Dbxref=GeneID:1103250;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC8E7.09c
NC_003888.3	RefSeq	repeat_region	8631512	8631548	.	-	.	ID=id10120;Note=inverted repeat unit which is 91 %25 identical over 37 nt to 5242..5278.;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8631557	8632408	.	+	.	ID=gene7876;Dbxref=GeneID:1103251;Name=SC8E7.10;gbkey=Gene;gene=SC8E7.10;gene_biotype=protein_coding;gene_synonym=SC8E7.10;locus_tag=SCO7813
NC_003888.3	RefSeq	CDS	8631557	8632408	.	+	0	ID=cds7734;Parent=gene7876;Dbxref=Genbank:NP_631842.1,GeneID:1103251;Name=NP_631842.1;Note=SC8E7.10%2C unknown%2C len: 283 aa. Highly similar to multiple proteins of unknown function including: Mycobacterium tuberculosis TR:P96822 (EMBL:Z92770) hypothetical 34.3 kd protein (317 aa)%2C fasta scores: opt: 607 z-score: 740.2 E():0 39.1%25 identity in 284 aa overlap and Streptomyces coelicolor TR:Q9ZBH0 (EMBL:AL035206) SC9B5.10 (303 aa)%2C fasta scores: opt: 481 z-score: 587.9 E(): 2.9e-25 36.4%25 identity in 280 aa overlap;gbkey=CDS;gene=SC8E7.10;product=hypothetical protein;protein_id=NP_631842.1;transl_table=11
NC_003888.3	RefSeq	gene	8633882	8634802	.	-	.	ID=gene7877;Dbxref=GeneID:1103252;Name=SC8E7.11c;gbkey=Gene;gene=SC8E7.11c;gene_biotype=pseudogene;gene_synonym=SC8E7.11c;locus_tag=SCO7814;pseudo=true
NC_003888.3	RefSeq	sequence_feature	8633882	8634802	.	-	.	ID=id10121;Dbxref=GeneID:1103252;Note=SC8E7.11c possible oxidoreductase%2C pseudogene%2C len: 290 aa. Highly similar to several including: Thermotoga maritima SW:FABG_THEMA(EMBL:X85171) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (256 aa). This CDS lack a suitable translational start site.%3Boxidoreductase (pseudogene).;gbkey=misc_feature;gene=SC8E7.11c
NC_003888.3	RefSeq	gene	8634816	8635487	.	+	.	ID=gene7878;Dbxref=GeneID:1103253;Name=SC8E7.12;gbkey=Gene;gene=SC8E7.12;gene_biotype=protein_coding;gene_synonym=SC8E7.12;locus_tag=SCO7815
NC_003888.3	RefSeq	CDS	8634816	8635487	.	+	0	ID=cds7735;Parent=gene7878;Dbxref=Genbank:NP_631843.1,GeneID:1103253;Name=NP_631843.1;Note=SC8E7.12 possible TetR-family transcriptional regulator%2C len: 223 aa. Highly similar to many regulators e.g. Mycobacterium tuberculosis TR:O53737 (EMBL:AL021932) transcriptional regulator (236 aa)%2C fasta scores opt: 471 z-score: 574.1 E(): 1.7e-24 39.0%25 identity in 218 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with a helix-turn-helix motif situated between residues 44..65 (+4.94 SD).;gbkey=CDS;gene=SC8E7.12;product=TetR family transcriptional regulator;protein_id=NP_631843.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8634897	8635037	.	+	.	ID=id10122;Dbxref=GeneID:1103253;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 42.70%2C E-value 2.1e-09;gbkey=misc_feature;gene=SC8E7.12
NC_003888.3	RefSeq	gene	8635620	8636324	.	+	.	ID=gene7879;Dbxref=GeneID:1103254;Name=SC8E7.13;gbkey=Gene;gene=SC8E7.13;gene_biotype=protein_coding;gene_synonym=SC8E7.13;locus_tag=SCO7816
NC_003888.3	RefSeq	CDS	8635620	8636324	.	+	0	ID=cds7736;Parent=gene7879;Dbxref=Genbank:NP_631844.1,GeneID:1103254;Name=NP_631844.1;Note=SC8E7.13%2C possible membrane protein%2C len: 234 aa. Weakly similar to several e.g. Staphylococcus aureus plasmid TR:O87368(EMBL:AF051917) membrane protein (248 aa)%2C fasta scores opt: 177 z-score: 205.1 E(): 0.0006 20.7%25 identity in 237 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8E7.13;product=hypothetical protein;protein_id=NP_631844.1;transl_table=11
NC_003888.3	RefSeq	gene	8636400	8637242	.	-	.	ID=gene7880;Dbxref=GeneID:1103255;Name=SC8E7.14;gbkey=Gene;gene=SC8E7.14;gene_biotype=protein_coding;gene_synonym=SC8E7.14;locus_tag=SCO7817
NC_003888.3	RefSeq	CDS	8636400	8637242	.	-	0	ID=cds7737;Parent=gene7880;Dbxref=Genbank:NP_631845.1,GeneID:1103255;Name=NP_631845.1;Note=SC8E7.14%2C possible DNA-binding protein%2C len: 280 aa. Highly similar to many other DNA-binding proteins e.g. Streptomyces coelicolor TR:Q9S1Q8 (EMBL:AL109972) SCJ9A.12C (279 aa)%2C fasta scores opt: 946 z-score: 1117.2 E(): 0 54.1%25 identity in 268 aa overlap. Contains a helix-turn-helix motif situated between residues 131..153 (+3.68 SD);gbkey=CDS;gene=SC8E7.14;product=DNA-binding protein;protein_id=NP_631845.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8637354	8637357	.	+	.	ID=id10123;gbkey=RBS
NC_003888.3	RefSeq	gene	8637359	8638123	.	+	.	ID=gene7881;Dbxref=GeneID:1103256;Name=SC8E7.15;gbkey=Gene;gene=SC8E7.15;gene_biotype=protein_coding;gene_synonym=SC8E7.15;locus_tag=SCO7818
NC_003888.3	RefSeq	CDS	8637359	8638123	.	+	0	ID=cds7738;Parent=gene7881;Dbxref=Genbank:NP_631846.1,GeneID:1103256;Name=NP_631846.1;Note=SC8E7.15%2C possible oxidoreductase%2C len: 254 aa. Similar to several e.g. Escherichia coli SW:ENTA_ECOLI(EMBL:M24148) 2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28) (248 aa)%2C fasta scores opt: 253 z-score: 302.9 E(): 2.1e-09 32.0%25 identity in 197 aa overlap and Streptomyces coelicolor TR:Q9S1Q4(EMBL:AL109972) oxidoreductase%2C SCJ9A.16 (253 aa)%2C fasta scores opt: 622 z-score: 730.3 E(): 0 45.5%25 identity in 244 aa overlap. Contains a Prosite hit to PS00061 Short-chain dehydrogenases/reductases family signature and a Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase.;gbkey=CDS;gene=SC8E7.15;product=oxidoreductase;protein_id=NP_631846.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8637374	8637922	.	+	.	ID=id10124;Dbxref=GeneID:1103256;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 113.40%2C E-value 4.4e-30;gbkey=misc_feature;gene=SC8E7.15
NC_003888.3	RefSeq	sequence_feature	8637773	8637859	.	+	.	ID=id10125;Dbxref=GeneID:1103256;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature;gene=SC8E7.15
NC_003888.3	RefSeq	gene	8638588	8639436	.	-	.	ID=gene7882;Dbxref=GeneID:1103257;Name=SC8E7.16c;gbkey=Gene;gene=SC8E7.16c;gene_biotype=protein_coding;gene_synonym=SC8E7.16c;locus_tag=SCO7819
NC_003888.3	RefSeq	CDS	8638588	8639436	.	-	0	ID=cds7739;Parent=gene7882;Dbxref=Genbank:NP_631847.1,GeneID:1103257;Name=NP_631847.1;Note=SC8E7.16c%2C possible integral membrane protein%2C len: 282 aa. Similar to the several e.g. Myxococcus xanthus SW:GUFA_MYXXA(EMBL:X71062) integral membrane protein found within the carotenogenesis operon%2C GufA (254 aa)%2C fasta scores opt: 173 z-score: 197.7 E(): 0.001625.8%25 identity in 252 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8E7.16c;product=hypothetical protein;protein_id=NP_631847.1;transl_table=11
NC_003888.3	RefSeq	repeat_region	8638908	8639340	.	-	.	ID=id10126;Dbxref=GeneID:1103257;Note=shares 74.65%25 identity in 434 nt overlap with repeated sequence 544..978;gbkey=repeat_region;gene=SC8E7.16c
NC_003888.3	RefSeq	ribosome_entry_site	8639449	8639456	.	+	.	ID=id10127;gbkey=RBS
NC_003888.3	RefSeq	gene	8639456	8639902	.	+	.	ID=gene7883;Dbxref=GeneID:1103258;Name=SC8E7.17;gbkey=Gene;gene=SC8E7.17;gene_biotype=protein_coding;gene_synonym=SC8E7.17;locus_tag=SCO7820
NC_003888.3	RefSeq	CDS	8639456	8639902	.	+	0	ID=cds7740;Parent=gene7883;Dbxref=Genbank:NP_631848.1,GeneID:1103258;Name=NP_631848.1;Note=SC8E7.17%2C doubtful CDS%2C len: 148 aa.;gbkey=CDS;gene=SC8E7.17;product=hypothetical protein;protein_id=NP_631848.1;transl_table=11
NC_003888.3	RefSeq	gene	8640037	8640450	.	+	.	ID=gene7884;Dbxref=GeneID:1103259;Name=SC8E7.18;gbkey=Gene;gene=SC8E7.18;gene_biotype=protein_coding;gene_synonym=SC8E7.18;locus_tag=SCO7821
NC_003888.3	RefSeq	CDS	8640037	8640450	.	+	0	ID=cds7741;Parent=gene7884;Dbxref=Genbank:NP_631849.1,GeneID:1103259;Name=NP_631849.1;Note=SC8E7.18%2C possible integral membrane protein%2C len: 137 aa. Similar in parts to other Streptomyces coelicolor membrane proteins e.g. TR:O86735(EMBL:AL031035) SC3A9.03C (149 aa)%2C fasta scores opt: 148 z-score: 187.6 E(): 0.0056 35.9%25 identity in 103 aa overlap. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8E7.18;product=hypothetical protein;protein_id=NP_631849.1;transl_table=11
NC_003888.3	RefSeq	gene	8641685	8642638	.	-	.	ID=gene7885;Dbxref=GeneID:1103260;Name=SC8E7.19c;gbkey=Gene;gene=SC8E7.19c;gene_biotype=protein_coding;gene_synonym=SC8E7.19c;locus_tag=SCO7822
NC_003888.3	RefSeq	CDS	8641685	8642638	.	-	0	ID=cds7742;Parent=gene7885;Dbxref=Genbank:NP_631850.1,GeneID:1103260;Name=NP_631850.1;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;gbkey=CDS;gene=SC8E7.19c;product=prolipoprotein diacylglyceryl transferase;protein_id=NP_631850.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8641850	8642617	.	-	.	ID=id10128;Dbxref=GeneID:1103260;Note=Pfam match to entry PF01790 LGT%2C Prolipoprotein diacylglyceryl transferase%2C score 235.30%2C E-value 8.6e-67;gbkey=misc_feature;gene=SC8E7.19c
NC_003888.3	RefSeq	gene	8642714	8643124	.	-	.	ID=gene7886;Dbxref=GeneID:1103261;Name=SC8E7.20c;gbkey=Gene;gene=SC8E7.20c;gene_biotype=protein_coding;gene_synonym=SC8E7.20c;locus_tag=SCO7823
NC_003888.3	RefSeq	CDS	8642714	8643124	.	-	0	ID=cds7743;Parent=gene7886;Dbxref=Genbank:NP_631851.1,GeneID:1103261;Name=NP_631851.1;Note=SC8E7.20c%2C possible membrane protein%2C len: 136 aa. Contains possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8E7.20c;product=hypothetical protein;protein_id=NP_631851.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8643132	8643136	.	-	.	ID=id10129;gbkey=RBS
NC_003888.3	RefSeq	gene	8643240	8643812	.	-	.	ID=gene7887;Dbxref=GeneID:1103262;Name=SC8E7.21c;gbkey=Gene;gene=SC8E7.21c;gene_biotype=protein_coding;gene_synonym=SC8E7.21c;locus_tag=SCO7824
NC_003888.3	RefSeq	CDS	8643240	8643812	.	-	0	ID=cds7744;Parent=gene7887;Dbxref=Genbank:NP_631852.1,GeneID:1103262;Name=NP_631852.1;Note=SC8E7.21c%2C possible TetR-family transcriptional regulator%2C len: 190 aa. Similar to Deinococcus radiodurans TR:Q9RWE9 (EMBL:AE001928) transcriptional regulator%2C TetR family (215 aa)%2C fasta scores opt:245 z-score: 307.6 E(): 1.2e-09 33.3%25 identity in 168 aa overlap. Contains a Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family with the helix-turn-helix motif situated between residues 32..53 (+4.08 SD);gbkey=CDS;gene=SC8E7.21c;product=TetR family transcriptional regulator;protein_id=NP_631852.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8643627	8643764	.	-	.	ID=id10130;Dbxref=GeneID:1103262;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 51.60%2C E-value 9.5e-12;gbkey=misc_feature;gene=SC8E7.21c
NC_003888.3	RefSeq	gene	8643812	8644108	.	+	.	ID=gene7888;Dbxref=GeneID:1103263;Name=SC8E7.22;gbkey=Gene;gene=SC8E7.22;gene_biotype=protein_coding;gene_synonym=SC8E7.22;locus_tag=SCO7825
NC_003888.3	RefSeq	CDS	8643812	8644108	.	+	0	ID=cds7745;Parent=gene7888;Dbxref=Genbank:NP_631853.1,GeneID:1103263;Name=NP_631853.1;Note=SC8E7.22%2C doubtful CDS%2C len: 98 aa.;gbkey=CDS;gene=SC8E7.22;product=hypothetical protein;protein_id=NP_631853.1;transl_table=11
NC_003888.3	RefSeq	gene	8644811	8645791	.	-	.	ID=gene7889;Dbxref=GeneID:1103264;Name=SC8E7.23c;gbkey=Gene;gene=SC8E7.23c;gene_biotype=protein_coding;gene_synonym=SC8E7.23c;locus_tag=SCO7826
NC_003888.3	RefSeq	CDS	8644811	8645791	.	-	0	ID=cds7746;Parent=gene7889;Dbxref=Genbank:NP_631854.1,GeneID:1103264;Name=NP_631854.1;Note=SC8E7.23c%2C unknown%2C len: 326 aa.;gbkey=CDS;gene=SC8E7.23c;product=hypothetical protein;protein_id=NP_631854.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8645855	8667507	.	-	.	ID=id10131;Note=TIR-R. Right hand chromosome end terminal inveretd repeat.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	8645858	8647597	.	-	.	ID=id10132;Note=possible insertion sequence.;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	8645858	8646440	.	-	.	ID=id10133;Note=shares 100 %25 sequence identity over 586 nt with Streptomyces coelicolor cosmid SCJ4 (EMBL:AL109950) (40744 nt).;gbkey=misc_feature
NC_003888.3	RefSeq	repeat_region	8645858	8645920	.	-	.	ID=id10134;Note=possible inverted repeat bounding insertion sequence. Shares 100%25 identity over 63 bp with complement(22285..22347).;gbkey=repeat_region
NC_003888.3	RefSeq	gene	8645888	8647537	.	-	.	ID=gene7890;Dbxref=GeneID:1103265;Name=SC8E7.24c;gbkey=Gene;gene=SC8E7.24c;gene_biotype=protein_coding;gene_synonym=SC8E7.24c;locus_tag=SCO7827
NC_003888.3	RefSeq	CDS	8645888	8647537	.	-	0	ID=cds7747;Parent=gene7890;Dbxref=Genbank:NP_631855.1,GeneID:1103265;Name=NP_631855.1;Note=SC8E7.24c%2C possible transposase%2C len: 549 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to the N-terminus of Streptomyces coelicolor TR:Q9S1X3(EMBL:AL109973) transposase (fragment)%2C SCJ30.16 (>398 aa) and to the C-terminus of Streptomyces coelicolor TR:Q9S1X2(EMBL:AL109950) transposase (fragment) SCJ4.01 (>183 aa). Note CDS SCJ30.16 and SCJ4.01 constitute the same CDS spanning the join of two adjacent cosmids. Also similar%2C in parts%2C to many other transposases e.g. Bordetella parapertussis SW:TRA1_BORPA(EMBL:X66858) transposase for insertion sequence element IS1001 (406 aa)%2C fasta scores opt: 203 z-score: 234.3 E(): 1.4e-05 28.4%25 identity in 215 aa overlap. Contains a helix-turn-helix motif situated between residues 308..329 (+4.27 SD) and a TTA leucine;gbkey=CDS;gene=SC8E7.24c;product=transposase;protein_id=NP_631855.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8646340	8657650	.	-	.	ID=id10135;Note=shares 100 %25 sequence identity over 11311 nt with Streptomyces coelicolor cosmid SCJ30 (EMBL:PAL109973) (11311 nt).;gbkey=misc_feature
NC_003888.3	RefSeq	sequence_feature	8647490	8647492	.	-	.	ID=id10136;Dbxref=GeneID:1103265;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC8E7.24c
NC_003888.3	RefSeq	repeat_region	8647535	8647597	.	-	.	ID=id10137;Note=possible inverted repeat bounding insertion sequence. Shares 100%25 identity over 63 bp with complement(20608..20670).;gbkey=repeat_region
NC_003888.3	RefSeq	ribosome_entry_site	8647722	8647726	.	+	.	ID=id10138;gbkey=RBS
NC_003888.3	RefSeq	gene	8647737	8647991	.	+	.	ID=gene7891;Dbxref=GeneID:1103266;Name=SC8E7.25;gbkey=Gene;gene=SC8E7.25;gene_biotype=protein_coding;gene_synonym=SC8E7.25;locus_tag=SCO7828
NC_003888.3	RefSeq	CDS	8647737	8647991	.	+	0	ID=cds7748;Parent=gene7891;Dbxref=Genbank:NP_631856.1,GeneID:1103266;Name=NP_631856.1;Note=SC8E7.25%2C possible DNA-binding protein%2C len: 84 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1X4 (EMBL:AL109973) hypothetical 9.0 kd protein%2C SCJ30.15C (84 aa). Contains a helix-turn-helix motif situated between residues 1..22 (+2.56 SD).;gbkey=CDS;gene=SC8E7.25;product=DNA-binding protein;protein_id=NP_631856.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8648146	8648150	.	+	.	ID=id10139;gbkey=RBS
NC_003888.3	RefSeq	gene	8648157	8649023	.	+	.	ID=gene7892;Dbxref=GeneID:1103267;Name=SC8E7.26;gbkey=Gene;gene=SC8E7.26;gene_biotype=protein_coding;gene_synonym=SC8E7.26;locus_tag=SCO7829
NC_003888.3	RefSeq	CDS	8648157	8649023	.	+	0	ID=cds7749;Parent=gene7892;Dbxref=Genbank:NP_631857.1,GeneID:1103267;Name=NP_631857.1;Note=SC8E7.26%2C unknown%2C len: 288 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1X5(EMBL:AL109973) hypothetical 31.6 kd protein%2C SCJ30.14C (288 aa). Also highly similar in regions to another Streptomyces coelicolor protein of undefined function: TR:Q9S1T4(EMBL:AL109950) SCJ4.39 (240 aa)%2C fasta scores opt: 334 z-score: 398.6 E(): 1e-14 41.6%25 identity in 245 aa overlap.;gbkey=CDS;gene=SC8E7.26;product=hypothetical protein;protein_id=NP_631857.1;transl_table=11
NC_003888.3	RefSeq	gene	8649245	8649589	.	-	.	ID=gene7893;Dbxref=GeneID:1103268;Name=SC8E7.27c;gbkey=Gene;gene=SC8E7.27c;gene_biotype=protein_coding;gene_synonym=SC8E7.27c;locus_tag=SCO7830
NC_003888.3	RefSeq	CDS	8649245	8649589	.	-	0	ID=cds7750;Parent=gene7893;Dbxref=Genbank:NP_631858.1,GeneID:1103268;Name=NP_631858.1;Note=SC8E7.27c%2C unknown%2C len: 114 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1X6(EMBL:AL109973) hypothetical 12.2 kd protein%2C SCJ30.13 (114 aa).;gbkey=CDS;gene=SC8E7.27c;product=hypothetical protein;protein_id=NP_631858.1;transl_table=11
NC_003888.3	RefSeq	gene	8649590	8649793	.	-	.	ID=gene7894;Dbxref=GeneID:1103269;Name=SC8E7.28c;gbkey=Gene;gene=SC8E7.28c;gene_biotype=protein_coding;gene_synonym=SC8E7.28c;locus_tag=SCO7831
NC_003888.3	RefSeq	CDS	8649590	8649793	.	-	0	ID=cds7751;Parent=gene7894;Dbxref=Genbank:NP_631859.1,GeneID:1103269;Name=NP_631859.1;Note=SC8E7.28c%2C unknown%2C len: 67 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1X7(EMBL:AL109973) hypothetical 7.2 kd protein%2C SCJ30.12 (67 aa).;gbkey=CDS;gene=SC8E7.28c;product=hypothetical protein;protein_id=NP_631859.1;transl_table=11
NC_003888.3	RefSeq	gene	8650206	8651438	.	+	.	ID=gene7895;Dbxref=GeneID:1103270;Name=SC8E7.29;gbkey=Gene;gene=SC8E7.29;gene_biotype=protein_coding;gene_synonym=SC8E7.29;locus_tag=SCO7832
NC_003888.3	RefSeq	CDS	8650206	8651438	.	+	0	ID=cds7752;Parent=gene7895;Dbxref=Genbank:NP_631860.1,GeneID:1103270;Name=NP_631860.1;Note=SC8E7.29%2C possible Na+/H+ antiporter%2C len: 410 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1X8(EMBL:AL109973) Na+/H+ antiporter%2C SCJ30.11c (410 aa). Also highly similar to many other antiporters e.g. Haemophilus influenzae SW:NHAA_HAEIN(EMBL:U32708) Na(+)/H(+) antiporter 1 (400 aa)%2C fasta scores opt: 504 z-score: 559.3 E(): 1.1e-23 36.6%25 identity in 391 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.;gbkey=CDS;gene=SC8E7.29;product=Na+/H+ antiporter;protein_id=NP_631860.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8651902	8651906	.	+	.	ID=id10140;gbkey=RBS
NC_003888.3	RefSeq	gene	8651913	8652191	.	+	.	ID=gene7896;Dbxref=GeneID:1103271;Name=SC8E7.30;gbkey=Gene;gene=SC8E7.30;gene_biotype=protein_coding;gene_synonym=SC8E7.30;locus_tag=SCO7833
NC_003888.3	RefSeq	CDS	8651913	8652191	.	+	0	ID=cds7753;Parent=gene7896;Dbxref=Genbank:NP_631861.1,GeneID:1103271;Name=NP_631861.1;Note=SC8E7.30%2C unknown%2C len: 92 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1X9(EMBL:AL109973) hypothetical 10.0 kD protein%2C SCJ30.10C (92 aa). Also highly similar to another Streptomyces coelicolor protein of undefined function: TR:CAB88808(EMBL:AL353832) hypothetical 8.3 kd protein%2C SCE6.04 (75 aa)%2C fasta scores opt: 101 z-score: 157.4 E():0.27 32.1%25 identity in 81 aa overlap and the SCP1 plasmid borne TR:Q9ACW7 (EMBL:AL590464) conserved hypothetical protein SCP1.184%2C 92 aa%3B fasta scores: opt: 499 Z-score: 653.4 E(): 9.2e-29%3B 81.522%25 identity in 92 aa overlap. Contains a TTA leucine codon possible target for bldA regulation;gbkey=CDS;gene=SC8E7.30;product=hypothetical protein;protein_id=NP_631861.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8651919	8651921	.	+	.	ID=id10141;Dbxref=GeneID:1103271;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC8E7.30
NC_003888.3	RefSeq	gene	8652479	8652769	.	+	.	ID=gene7897;Dbxref=GeneID:1103272;Name=SC8E7.31;gbkey=Gene;gene=SC8E7.31;gene_biotype=protein_coding;gene_synonym=SC8E7.31;locus_tag=SCO7834
NC_003888.3	RefSeq	CDS	8652479	8652769	.	+	0	ID=cds7754;Parent=gene7897;Dbxref=Genbank:NP_631862.1,GeneID:1103272;Name=NP_631862.1;Note=SC8E7.31%2C unknown%2C len: 96 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1Y0(EMBL:AL109973) hypothetical 10.9 kd protein%2C SCJ30.09C (96 aa);gbkey=CDS;gene=SC8E7.31;product=hypothetical protein;protein_id=NP_631862.1;transl_table=11
NC_003888.3	RefSeq	gene	8653054	8653464	.	+	.	ID=gene7898;Dbxref=GeneID:1103273;Name=SC8E7.32;gbkey=Gene;gene=SC8E7.32;gene_biotype=protein_coding;gene_synonym=SC8E7.32;locus_tag=SCO7835
NC_003888.3	RefSeq	CDS	8653054	8653464	.	+	0	ID=cds7755;Parent=gene7898;Dbxref=Genbank:NP_631863.1,GeneID:1103273;Name=NP_631863.1;Note=SC8E7.32%2C unknown%2C len: 136 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1Y2(EMBL:AL109973) hypothetical 15.5 kd protein%2C SCJ30.07c (136 aa).;gbkey=CDS;gene=SC8E7.32;product=hypothetical protein;protein_id=NP_631863.1;transl_table=11
NC_003888.3	RefSeq	gene	8653485	8654294	.	+	.	ID=gene7899;Dbxref=GeneID:1103274;Name=SC8E7.33;gbkey=Gene;gene=SC8E7.33;gene_biotype=protein_coding;gene_synonym=SC8E7.33;locus_tag=SCO7836
NC_003888.3	RefSeq	CDS	8653485	8654294	.	+	0	ID=cds7756;Parent=gene7899;Dbxref=Genbank:NP_631864.1,GeneID:1103274;Name=NP_631864.1;Note=SC8E7.33%2C unknown%2C len: 269 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1Y3(EMBL:AL109973) hypothetical protein%2C SCJ30.06c (269 aa). Note the large overlap with the adjoining CDS.;gbkey=CDS;gene=SC8E7.33;product=hypothetical protein;protein_id=NP_631864.1;transl_table=11
NC_003888.3	RefSeq	gene	8654051	8655142	.	-	.	ID=gene7900;Dbxref=GeneID:1103275;Name=SC8E7.34c;gbkey=Gene;gene=SC8E7.34c;gene_biotype=protein_coding;gene_synonym=SC8E7.34c;locus_tag=SCO7837
NC_003888.3	RefSeq	CDS	8654051	8655142	.	-	0	ID=cds7757;Parent=gene7900;Dbxref=Genbank:NP_631865.1,GeneID:1103275;Name=NP_631865.1;Note=SC8E7.34c%2C possible membrane protein%2C len: 363 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1Y4(EMBL:AL109973) hypothetical protein%2C SCJ30.05 (363 aa). Also similar to Streptomyces coelicolor TR:Q9X886(EMBL:AL049707)  transferase%2C SCE15.11C (448 aa)%2C fasta scores opt: 411 z-score: 409.1 E(): 2.6e-15 32.8%25 identity in 274 aa overlap. Note the large overlap with the adjoining CDS. Contains possible membrane spanning hydrophobic domains and a TTA /leucine codon%2C possible target for bldA regulation.;gbkey=CDS;gene=SC8E7.34c;product=hypothetical protein;protein_id=NP_631865.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8654246	8654248	.	-	.	ID=id10142;Dbxref=GeneID:1103275;Note=TTA /leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=SC8E7.34c
NC_003888.3	RefSeq	gene	8655556	8655891	.	+	.	ID=gene7901;Dbxref=GeneID:1103276;Name=SC8E7.35;gbkey=Gene;gene=SC8E7.35;gene_biotype=protein_coding;gene_synonym=SC8E7.35;locus_tag=SCO7838
NC_003888.3	RefSeq	CDS	8655556	8655891	.	+	0	ID=cds7758;Parent=gene7901;Dbxref=Genbank:NP_631866.1,GeneID:1103276;Name=NP_631866.1;Note=SC8E7.35%2C unknown%2C len: 111 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1Y5(EMBL:AL109973) hypothetical protein%2C SCJ30.04c (111 aa).;gbkey=CDS;gene=SC8E7.35;product=hypothetical protein;protein_id=NP_631866.1;transl_table=11
NC_003888.3	RefSeq	gene	8656148	8656498	.	+	.	ID=gene7902;Dbxref=GeneID:1103277;Name=SC8E7.36;gbkey=Gene;gene=SC8E7.36;gene_biotype=protein_coding;gene_synonym=SC8E7.36;locus_tag=SCO7839
NC_003888.3	RefSeq	CDS	8656148	8656498	.	+	0	ID=cds7759;Parent=gene7902;Dbxref=Genbank:NP_631867.1,GeneID:1103277;Name=NP_631867.1;Note=SC8E7.36%2C unknown%2C len: 116 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1Y4(EMBL:AL109973) hypothetical protein%2C SCJ30.03c (116 aa).;gbkey=CDS;gene=SC8E7.36;product=hypothetical protein;protein_id=NP_631867.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8656497	8656501	.	+	.	ID=id10143;gbkey=RBS
NC_003888.3	RefSeq	gene	8656508	8656954	.	+	.	ID=gene7903;Dbxref=GeneID:1103278;Name=SC8E7.37;gbkey=Gene;gene=SC8E7.37;gene_biotype=protein_coding;gene_synonym=SC8E7.37;locus_tag=SCO7840
NC_003888.3	RefSeq	CDS	8656508	8656954	.	+	0	ID=cds7760;Parent=gene7903;Dbxref=Genbank:NP_631868.1,GeneID:1103278;Name=NP_631868.1;Note=SC8E7.37%2C unknown%2C len: 148 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1Y6 (EMBL:AL109973) hypothetical protein%2C SCJ30.02c (148 aa).;gbkey=CDS;gene=SC8E7.37;product=hypothetical protein;protein_id=NP_631868.1;transl_table=11
NC_003888.3	RefSeq	gene	8657098	8658204	.	-	.	ID=gene7904;Dbxref=GeneID:1103279;Name=SC8E7.38c;gbkey=Gene;gene=SC8E7.38c;gene_biotype=protein_coding;gene_synonym=SC8E7.38c;locus_tag=SCO7841
NC_003888.3	RefSeq	CDS	8657098	8658204	.	-	0	ID=cds7761;Parent=gene7904;Dbxref=Genbank:NP_733755.1,GeneID:1103279;Name=NP_733755.1;Note=SC8E7.38c%2C possible ATP/GTP-binding protein%2C len: 368 aa. This CDS lies within a sequence duplicated at both ends of the Streptomyces coelicolor chromosome. Identical to Streptomyces coelicolor TR:Q9S1Y8(EMBL:AL109973) hypothetical protein (fragment)%2C SCJ30.01 (183 aa). Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=SC8E7.38c;product=ATP/GTP-binding protein;protein_id=NP_733755.1;transl_table=11
NC_003888.3	RefSeq	sequence_feature	8657534	8660529	.	-	.	ID=id10144;Note=shares 100 %25 sequence identity over 2996 nt with Streptomyces coelicolor cosmid SC1C9 (2996 nt).;gbkey=misc_feature
NC_003888.3	RefSeq	gene	8658201	8660321	.	-	.	ID=gene7905;Dbxref=GeneID:1103280;Name=SC8E7.39c;gbkey=Gene;gene=SC8E7.39c;gene_biotype=protein_coding;gene_synonym=SC8E7.39c;locus_tag=SCO7842
NC_003888.3	RefSeq	CDS	8658201	8660321	.	-	0	ID=cds7762;Parent=gene7905;Dbxref=Genbank:NP_631870.1,GeneID:1103280;Name=NP_631870.1;Note=SC8E7.39c possible transposase%2C len: 706 aa. Similar to several including: Klebsiella aerogenes TR:Q48382(EMBL:X72585) probable transposase TnIA (559 aa)%2C fasta scores opt: 223 z-score: 248.4 E(): 2.3e-06 27.0%25 identity in 575 aa overlap and Streptomyces flavopersicus TR:Q9S1K8(EMBL:U70376) transposase homologue (679 aa)%2C fasta scores opt: 2570 z-score: 2862.5 E():0 57.4%25 identity in 700 aa overlap.;gbkey=CDS;gene=SC8E7.39c;product=transposase;protein_id=NP_631870.1;transl_table=11
NC_003888.3	RefSeq	gene	8660335	8661282	.	-	.	ID=gene7906;Dbxref=GeneID:1103281;Name=SC8E7.40c;gbkey=Gene;gene=SC8E7.40c;gene_biotype=protein_coding;gene_synonym=SC8E7.40c;locus_tag=SCO7843
NC_003888.3	RefSeq	CDS	8660335	8661282	.	-	0	ID=cds7763;Parent=gene7906;Dbxref=Genbank:NP_733756.1,GeneID:1103281;Name=NP_733756.1;Note=SC8E7.40c%2C unknown%2C len: 315 aa.;gbkey=CDS;gene=SC8E7.40c;product=hypothetical protein;protein_id=NP_733756.1;transl_table=11
NC_003888.3	RefSeq	gene	8661288	8663639	.	-	.	ID=gene7907;Dbxref=GeneID:1103282;Name=SC8E7.41c;gbkey=Gene;gene=SC8E7.41c;gene_biotype=protein_coding;gene_synonym=SC8E7.41c;locus_tag=SCO7844
NC_003888.3	RefSeq	CDS	8661288	8663639	.	-	0	ID=cds7764;Parent=gene7907;Dbxref=Genbank:NP_631872.1,GeneID:1103282;Name=NP_631872.1;Note=SC8E7.41c%2C possible DNA-binding protein%2C len: 783 aa. Contains a helix-turn-helix motif situated between residues 69..90 (+3.17 SD).;gbkey=CDS;gene=SC8E7.41c;product=DNA-binding protein;protein_id=NP_631872.1;transl_table=11
NC_003888.3	RefSeq	gene	8663695	8666256	.	-	.	ID=gene7908;Dbxref=GeneID:1103283;Name=SC8E7.42c;gbkey=Gene;gene=SC8E7.42c;gene_biotype=protein_coding;gene_synonym=SC8E7.42c,SCJ24.01c;locus_tag=SCO7845
NC_003888.3	RefSeq	CDS	8663695	8666256	.	-	0	ID=cds7765;Parent=gene7908;Dbxref=Genbank:NP_733757.1,GeneID:1103283;Name=NP_733757.1;Note=SCJ24.01c%2C unknown%2C partial CDS%2C len: >457 aa%3B strongly similar to TR:AAF36550 (EMBL:AF194023) helicase-like protein from Streptomyces lividans (881 aa) fasta scores%3B opt: 2191%2C z-score: 2490.1%2C E(): 0%2C 72.5%25 identity in 458 aa overlap.~SC8E7.42c%2C partial CDS%2C unknown%2C len:> 431 aa. Highly similar to Streptomyces lividans TR:AAF36550 (EMBL:AF194023) helicase-like protein found in the chromosome terminal region (881 aa)%2C fasta scores opt: 1940 z-score: 2170.3 E():0 66.9%25 identity in 438 aa overlap.;gbkey=CDS;gene=SC8E7.42c;product=hypothetical protein;protein_id=NP_733757.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8666265	8666270	.	-	.	ID=id10145;gbkey=RBS
NC_003888.3	RefSeq	gene	8666385	8667062	.	-	.	ID=gene7909;Dbxref=GeneID:1103284;Name=SCEND.02c;gbkey=Gene;gene=SCEND.02c;gene_biotype=protein_coding;gene_synonym=SCEND.02c;locus_tag=SCO7846
NC_003888.3	RefSeq	CDS	8666385	8667062	.	-	0	ID=cds7766;Parent=gene7909;Dbxref=Genbank:NP_631873.1,GeneID:1103284;Name=NP_631873.1;Note=SCEND.02c%2C unknown%2C doubtful CDS%2C len: 225 aa;gbkey=CDS;gene=SCEND.02c;product=hypothetical protein;protein_id=NP_631873.1;transl_table=11
NC_003888.3	RefSeq	ribosome_entry_site	8667068	8667073	.	-	.	ID=id10146;gbkey=RBS
##sequence-region NC_003903.1 1 356023
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=100226
NC_003903.1	RefSeq	region	1	356023	.	+	.	ID=id10147;Dbxref=taxon:100226;Name=SCP1;gbkey=Src;genome=plasmid;mol_type=genomic DNA;old-name=Streptomyces coelicolor;plasmid-name=SCP1;serovar=A3(2)
NC_003903.1	RefSeq	sequence_feature	1	75122	.	+	.	ID=id10148;Note=Terminal inverted repeat.%3B label: TIR-L;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	1	342	.	+	.	ID=id10149;Note=Previously sequenced as EMBL:S70700 [Left end of SCP1]%3B label: S70700;gbkey=misc_feature
NC_003903.1	RefSeq	gene	899	1522	.	-	.	ID=gene7910;Dbxref=GeneID:1095080;Name=SCP1.01c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.01c
NC_003903.1	RefSeq	CDS	899	1522	.	-	0	ID=cds7767;Parent=gene7910;Dbxref=Genbank:NP_639577.1,GeneID:1095080;Name=NP_639577.1;Note=unknown%2C len: 207aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639577.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	1528	1533	.	-	.	ID=id10150;gbkey=RBS
NC_003903.1	RefSeq	gene	1607	2812	.	-	.	ID=gene7911;Dbxref=GeneID:1095081;Name=SCP1.02c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.02c
NC_003903.1	RefSeq	CDS	1607	2812	.	-	0	ID=cds7768;Parent=gene7911;Dbxref=Genbank:NP_639578.1,GeneID:1095081;Name=NP_639578.1;Note=unknown%2C len: 401aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639578.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	2818	2824	.	-	.	ID=id10151;gbkey=RBS
NC_003903.1	RefSeq	gene	2903	3121	.	-	.	ID=gene7912;Dbxref=GeneID:1095082;Name=SCP1.03c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.03c
NC_003903.1	RefSeq	CDS	2903	3121	.	-	0	ID=cds7769;Parent=gene7912;Dbxref=Genbank:NP_639579.1,GeneID:1095082;Name=NP_639579.1;Note=unknown%2C len: 72aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639579.1;transl_table=11
NC_003903.1	RefSeq	gene	3109	3345	.	-	.	ID=gene7913;Dbxref=GeneID:1095083;Name=SCP1.04c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.04c
NC_003903.1	RefSeq	CDS	3109	3345	.	-	0	ID=cds7770;Parent=gene7913;Dbxref=Genbank:NP_639580.1,GeneID:1095083;Name=NP_639580.1;Note=unknown%2C len: 78aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639580.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	3126	3131	.	-	.	ID=id10152;Dbxref=GeneID:1095083;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	3354	3358	.	-	.	ID=id10153;gbkey=RBS
NC_003903.1	RefSeq	gene	3424	3819	.	-	.	ID=gene7914;Dbxref=GeneID:1095084;Name=SCP1.05c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.05c
NC_003903.1	RefSeq	CDS	3424	3819	.	-	0	ID=cds7771;Parent=gene7914;Dbxref=Genbank:NP_639581.1,GeneID:1095084;Name=NP_639581.1;Note=unknown%2C len: 131aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639581.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	3827	3831	.	-	.	ID=id10154;gbkey=RBS
NC_003903.1	RefSeq	stem_loop	3974	4234	.	+	.	ID=id10155;Note=Inverted repeat spanning a region of non-coding DNA. Score 52: 24/29 ( 82%25) matches%2C 0 gaps.;gbkey=stem_loop
NC_003903.1	RefSeq	gene	4408	4632	.	-	.	ID=gene7915;Dbxref=GeneID:1095085;Name=SCP1.06c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.06c
NC_003903.1	RefSeq	CDS	4408	4632	.	-	0	ID=cds7772;Parent=gene7915;Dbxref=Genbank:NP_639582.1,GeneID:1095085;Name=NP_639582.1;Note=unknown%2C len: 74aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639582.1;transl_table=11
NC_003903.1	RefSeq	gene	4629	4922	.	-	.	ID=gene7916;Dbxref=GeneID:1095086;Name=SCP1.07c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.07c
NC_003903.1	RefSeq	CDS	4629	4922	.	-	0	ID=cds7773;Parent=gene7916;Dbxref=Genbank:NP_639583.1,GeneID:1095086;Name=NP_639583.1;Note=unknown%2C len: 97aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639583.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	4641	4644	.	-	.	ID=id10156;Dbxref=GeneID:1095086;gbkey=RBS
NC_003903.1	RefSeq	gene	4919	5440	.	-	.	ID=gene7917;Dbxref=GeneID:1095087;Name=SCP1.08c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.08c
NC_003903.1	RefSeq	CDS	4919	5440	.	-	0	ID=cds7774;Parent=gene7917;Dbxref=Genbank:NP_639584.1,GeneID:1095087;Name=NP_639584.1;Note=unknown%2C len: 173aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639584.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	4929	4935	.	-	.	ID=id10157;Dbxref=GeneID:1095087;gbkey=RBS
NC_003903.1	RefSeq	gene	5516	6181	.	-	.	ID=gene7918;Dbxref=GeneID:1095088;Name=SCP1.09c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.09c
NC_003903.1	RefSeq	CDS	5516	6181	.	-	0	ID=cds7775;Parent=gene7918;Dbxref=Genbank:NP_639585.1,GeneID:1095088;Name=NP_639585.1;Note=unknown%2C len: 221aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639585.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	6187	6192	.	-	.	ID=id10158;gbkey=RBS
NC_003903.1	RefSeq	stem_loop	6318	6590	.	+	.	ID=id10159;Note=Inverted repeat spanning a region of non-coding DNA. Score 96: 36/39 ( 92%25) matches%2C 0 gaps.;gbkey=stem_loop
NC_003903.1	RefSeq	ribosome_entry_site	6765	6772	.	+	.	ID=id10160;gbkey=RBS
NC_003903.1	RefSeq	gene	6777	7271	.	+	.	ID=gene7919;Dbxref=GeneID:1095089;Name=SCP1.10;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.10
NC_003903.1	RefSeq	CDS	6777	7271	.	+	0	ID=cds7776;Parent=gene7919;Dbxref=Genbank:NP_639586.1,GeneID:1095089;Name=NP_639586.1;Note=unknown%2C contains TTA encoded leucine at residue 33%2C possible target for bldA regulation. len: 164aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639586.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	6873	6875	.	+	.	ID=id10161;Dbxref=GeneID:1095089;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	gene	7395	8138	.	-	.	ID=gene7920;Dbxref=GeneID:1095090;Name=SCP1.11c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.11c
NC_003903.1	RefSeq	CDS	7395	8138	.	-	0	ID=cds7777;Parent=gene7920;Dbxref=Genbank:NP_639587.1,GeneID:1095090;Name=NP_639587.1;Note=unknown%2C len: 247aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639587.1;transl_table=11
NC_003903.1	RefSeq	gene	8135	8590	.	-	.	ID=gene7921;Dbxref=GeneID:1095091;Name=SCP1.12c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.12c
NC_003903.1	RefSeq	CDS	8135	8590	.	-	0	ID=cds7778;Parent=gene7921;Dbxref=Genbank:NP_639588.1,GeneID:1095091;Name=NP_639588.1;Note=doubtful CDS%2C unknown%2C len: 151aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639588.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	8148	8153	.	-	.	ID=id10162;Dbxref=GeneID:1095091;gbkey=RBS
NC_003903.1	RefSeq	gene	8633	10249	.	-	.	ID=gene7922;Dbxref=GeneID:1095092;Name=SCP1.13c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.13c
NC_003903.1	RefSeq	CDS	8633	10249	.	-	0	ID=cds7779;Parent=gene7922;Dbxref=Genbank:NP_639589.1,GeneID:1095092;Name=NP_639589.1;Note=conserved hypothetical protein%2C len: 538aa%3B C-terminal similar to TR:Q9KXL1 (EMBL:AL357524) hypothetical protein from Streptomyces coelicolor (282 aa) fasta scores%3B opt:  682%2C z-score: 810.6%2C E(): 0%2C 51.1%25 identity in 235 aa overlap. Contains TTA encoded leucine at residue 154%2C possible target for bldA regulation.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639589.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	9788	9790	.	-	.	ID=id10163;Dbxref=GeneID:1095092;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	gene	10282	11430	.	-	.	ID=gene7923;Dbxref=GeneID:1095093;Name=SCP1.14c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.14c
NC_003903.1	RefSeq	CDS	10282	11430	.	-	0	ID=cds7780;Parent=gene7923;Dbxref=Genbank:NP_639590.1,GeneID:1095093;Name=NP_639590.1;Note=unknown%2C len: 382aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639590.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	11674	11678	.	+	.	ID=id10164;gbkey=RBS
NC_003903.1	RefSeq	gene	11690	11914	.	+	.	ID=gene7924;Dbxref=GeneID:1095094;Name=SCP1.15;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.15
NC_003903.1	RefSeq	CDS	11690	11914	.	+	0	ID=cds7781;Parent=gene7924;Dbxref=Genbank:NP_639591.1,GeneID:1095094;Name=NP_639591.1;Note=possible membrane protein%2C len: 74aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639591.1;transl_table=11
NC_003903.1	RefSeq	gene	12362	12946	.	-	.	ID=gene7925;Dbxref=GeneID:1095095;Name=SCP1.16c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.16c
NC_003903.1	RefSeq	CDS	12362	12946	.	-	0	ID=cds7782;Parent=gene7925;Dbxref=Genbank:NP_639592.1,GeneID:1095095;Name=NP_639592.1;Note=unknown%2C len: 194aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639592.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	13078	13085	.	+	.	ID=id10165;gbkey=RBS
NC_003903.1	RefSeq	gene	13089	13907	.	+	.	ID=gene7926;Dbxref=GeneID:1095096;Name=SCP1.17;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.17
NC_003903.1	RefSeq	CDS	13089	13907	.	+	0	ID=cds7783;Parent=gene7926;Dbxref=Genbank:NP_639593.1,GeneID:1095096;Name=NP_639593.1;Note=unknown%2C len: 272aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639593.1;transl_table=11
NC_003903.1	RefSeq	gene	13943	16294	.	-	.	ID=gene7927;Dbxref=GeneID:1095097;Name=SCP1.18c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.18c
NC_003903.1	RefSeq	CDS	13943	16294	.	-	0	ID=cds7784;Parent=gene7927;Dbxref=Genbank:NP_639594.1,GeneID:1095097;Name=NP_639594.1;Note=possible DNA integrase/recombinase%2C len: 783aa%3B C-terminal region weakly similar to many members of the 'phage' integrase family eg. SW:P06697 (TNPB_STAAU) transposase B (transposon Tn554) from Staphylococcus aureus (630 aa) fasta scores%3B opt:  205%2C z-score: 242.4%2C E(): 4.9e-06%2C 22.1%25 identity in 280 aa overlap. Contains Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family.;gbkey=CDS;product=DNA integrase/recombinase;protein_id=NP_639594.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	14354	14989	.	-	.	ID=id10166;Dbxref=GeneID:1095097;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 61.30%2C E-value 2.1e-14;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	16299	16303	.	-	.	ID=id10167;gbkey=RBS
NC_003903.1	RefSeq	gene	16386	17612	.	-	.	ID=gene7928;Dbxref=GeneID:1095098;Name=SCP1.19c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.19c
NC_003903.1	RefSeq	CDS	16386	17612	.	-	0	ID=cds7785;Parent=gene7928;Dbxref=Genbank:NP_639595.1,GeneID:1095098;Name=NP_639595.1;Note=possible DNA integrase/recombinase%2C len: 408aa%3B C-terminal region weakly similar to many members of the 'phage' integrase family eg. SW:P21891 (XERD_ECOLI) integrase/recombinase XerD from Escherichia coli (298 aa) fasta scores%3B opt:  195%2C z-score: 217.2%2C E(): 0.00012%2C 28.1%25 identity in 217 aa overlap. Contains Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family. Possible upstream and downstream alternative translational strat sites.;gbkey=CDS;product=DNA integrase/recombinase;protein_id=NP_639595.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	16479	17027	.	-	.	ID=id10168;Dbxref=GeneID:1095098;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 63.70%2C E-value 4e-15;gbkey=misc_feature
NC_003903.1	RefSeq	gene	17618	18400	.	-	.	ID=gene7929;Dbxref=GeneID:1095099;Name=SCP1.20c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.20c
NC_003903.1	RefSeq	CDS	17618	18400	.	-	0	ID=cds7786;Parent=gene7929;Dbxref=Genbank:NP_639596.1,GeneID:1095099;Name=NP_639596.1;Note=unknown%2C len: 260aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639596.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	18403	18407	.	-	.	ID=id10169;gbkey=RBS
NC_003903.1	RefSeq	gene	18421	19278	.	-	.	ID=gene7930;Dbxref=GeneID:1095100;Name=SCP1.21c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.21c
NC_003903.1	RefSeq	CDS	18421	19278	.	-	0	ID=cds7787;Parent=gene7930;Dbxref=Genbank:NP_639597.1,GeneID:1095100;Name=NP_639597.1;Note=unknown%2C len: 285aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639597.1;transl_table=11
NC_003903.1	RefSeq	gene	19353	19586	.	-	.	ID=gene7931;Dbxref=GeneID:1095101;Name=SCP1.22c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.22c
NC_003903.1	RefSeq	CDS	19353	19586	.	-	0	ID=cds7788;Parent=gene7931;Dbxref=Genbank:NP_639598.1,GeneID:1095101;Name=NP_639598.1;Note=unknown%2C len: 77aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639598.1;transl_table=11
NC_003903.1	RefSeq	gene	19574	19708	.	-	.	ID=gene7932;Dbxref=GeneID:1095102;Name=SCP1.23c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.23c
NC_003903.1	RefSeq	CDS	19574	19708	.	-	0	ID=cds7789;Parent=gene7932;Dbxref=Genbank:NP_639599.1,GeneID:1095102;Name=NP_639599.1;Note=unknown%2C doubtful CDS%2C len: 44aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639599.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	19590	19595	.	-	.	ID=id10170;Dbxref=GeneID:1095102;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	19712	19718	.	-	.	ID=id10171;gbkey=RBS
NC_003903.1	RefSeq	gene	19920	20165	.	+	.	ID=gene7933;Dbxref=GeneID:1095103;Name=SCP1.24;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.24
NC_003903.1	RefSeq	CDS	19920	20165	.	+	0	ID=cds7790;Parent=gene7933;Dbxref=Genbank:NP_639600.1,GeneID:1095103;Name=NP_639600.1;Note=unknown%2C doubtful CDS%2C len: 81aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639600.1;transl_table=11
NC_003903.1	RefSeq	gene	20274	21338	.	-	.	ID=gene7934;Dbxref=GeneID:1095104;Name=SCP1.25c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.25c
NC_003903.1	RefSeq	CDS	20274	21338	.	-	0	ID=cds7791;Parent=gene7934;Dbxref=Genbank:NP_639601.1,GeneID:1095104;Name=NP_639601.1;Note=unknown%2C len: 354aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639601.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	21345	21349	.	-	.	ID=id10172;gbkey=RBS
NC_003903.1	RefSeq	gene	22062	22904	.	-	.	ID=gene7935;Dbxref=GeneID:1095105;Name=SCP1.26c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.26c
NC_003903.1	RefSeq	CDS	22062	22904	.	-	0	ID=cds7792;Parent=gene7935;Dbxref=Genbank:NP_639602.1,GeneID:1095105;Name=NP_639602.1;Note=unknown%2C len: 280aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639602.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	22918	22922	.	-	.	ID=id10173;gbkey=RBS
NC_003903.1	RefSeq	stem_loop	23049	23095	.	+	.	ID=id10174;Note=Score 69: 23/23 (100%25) matches%2C 0 gaps%2C possible 23 base loop.;gbkey=stem_loop
NC_003903.1	RefSeq	gene	23099	26470	.	-	.	ID=gene7936;Dbxref=GeneID:1095106;Name=SCP1.27c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.27c
NC_003903.1	RefSeq	CDS	23099	26470	.	-	0	ID=cds7793;Parent=gene7936;Dbxref=Genbank:NP_639603.1,GeneID:1095106;Name=NP_639603.1;Note=unknown%2C len: 1123aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639603.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	26475	26479	.	-	.	ID=id10175;gbkey=RBS
NC_003903.1	RefSeq	gene	26523	26876	.	-	.	ID=gene7937;Dbxref=GeneID:1095107;Name=SCP1.28c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.28c
NC_003903.1	RefSeq	CDS	26523	26876	.	-	0	ID=cds7794;Parent=gene7937;Dbxref=Genbank:NP_639604.1,GeneID:1095107;Name=NP_639604.1;Note=unknown%2C len: 117aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639604.1;transl_table=11
NC_003903.1	RefSeq	gene	27692	28150	.	+	.	ID=gene7938;Dbxref=GeneID:1095108;Name=SCP1.29;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.29
NC_003903.1	RefSeq	CDS	27692	28150	.	+	0	ID=cds7795;Parent=gene7938;Dbxref=Genbank:NP_639605.1,GeneID:1095108;Name=NP_639605.1;Note=unknown%2C len: 152aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639605.1;transl_table=11
NC_003903.1	RefSeq	gene	28328	28891	.	-	.	ID=gene7939;Dbxref=GeneID:1095109;Name=SCP1.30;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.30
NC_003903.1	RefSeq	CDS	28328	28891	.	-	0	ID=cds7796;Parent=gene7939;Dbxref=Genbank:NP_639606.1,GeneID:1095109;Name=NP_639606.1;Note=unknown%2C len: 187aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639606.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	29043	29778	.	+	.	ID=id10176;Note=Directly%2C imperfectly repeated at 264720..265446. Inverted and perfectly repeated at complement(326246..326981).;gbkey=repeat_region
NC_003903.1	RefSeq	gene	29125	29784	.	+	.	ID=gene7940;Dbxref=GeneID:1095110;Name=SCP1.31;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.31
NC_003903.1	RefSeq	CDS	29125	29784	.	+	0	ID=cds7797;Parent=gene7940;Dbxref=Genbank:NP_639607.1,GeneID:1095110;Name=NP_639607.1;Note=possible secreted protein%2C len: 219aa%3B similar to TR:Q9KY42 (EMBL:AL356892) hypothetical protein from Streptomyces coelicolor (214 aa) fasta scores%3B opt: 499%2C z-score: 600.0%2C E(): 5.9e-26%2C 41.9%25 identity in 210 aa overlap. Also strongly similar over full length to CDS SCP1.267 (fasta scores%3B opt: 1190%2C z-score: 1349.2%2C E(): 0%2C 77.5%25 identity in 218 aa overlap) and C-terminus strongly similar to its neighbouring CDS SCP1.268 (111 aa) (fasta scores%3B opt: 401%2C z-score: 463.8%2C E(): 2.6e-21%2C 57.4%25 identity in 108 aa overlap). Contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;product=secreted protein;protein_id=NP_639607.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	29490	29757	.	+	.	ID=id10177;Dbxref=GeneID:1095110;Note=Directly and imperfectly repeated at 265494..265758. Inverted and perfectly repeated at complement(326267..325534).;gbkey=repeat_region
NC_003903.1	RefSeq	gene	29839	30219	.	-	.	ID=gene7941;Dbxref=GeneID:1095111;Name=SCP1.32c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.32c
NC_003903.1	RefSeq	CDS	29839	30219	.	-	0	ID=cds7798;Parent=gene7941;Dbxref=Genbank:NP_639608.1,GeneID:1095111;Name=NP_639608.1;Note=unknown%2C len: 126aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639608.1;transl_table=11
NC_003903.1	RefSeq	gene	30246	31271	.	-	.	ID=gene7942;Dbxref=GeneID:1095112;Name=SCP1.33c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.33c
NC_003903.1	RefSeq	CDS	30246	31271	.	-	0	ID=cds7799;Parent=gene7942;Dbxref=Genbank:NP_639609.1,GeneID:1095112;Name=NP_639609.1;Note=unknown%2C len: 341aa%3B similar to TR:Q9S292 (EMBL:AL096849) hypothetical protein from Streptomyces coelicolor (322 aa) fasta scores%3B opt:  620%2C z-score: 708.4%2C E(): 5.5e-32%2C 37.3%25 identity in 322 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639609.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	31275	31281	.	-	.	ID=id10178;gbkey=RBS
NC_003903.1	RefSeq	gene	31461	32399	.	+	.	ID=gene7943;Dbxref=GeneID:1095113;Name=SCP1.34;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.34
NC_003903.1	RefSeq	CDS	31461	32399	.	+	0	ID=cds7800;Parent=gene7943;Dbxref=Genbank:NP_639610.1,GeneID:1095113;Name=NP_639610.1;Note=possible conserved integral membrane protein%2C len: 312aa%3B similar to many from Streptomyces coelicolor eg. TR:O69922 (EMBL:AL023861)  integral membrane protein (367 aa) fasta scores%3B opt:  613%2C z-score: 713.6%2C E(): 2.8e-32%2C 44.6%25 identity in 222 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=integral membrane protein;protein_id=NP_639610.1;transl_table=11
NC_003903.1	RefSeq	gene	32556	32855	.	+	.	ID=gene7944;Dbxref=GeneID:1095114;Name=SCP1.35;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.35
NC_003903.1	RefSeq	CDS	32556	32855	.	+	0	ID=cds7801;Parent=gene7944;Dbxref=Genbank:NP_639611.1,GeneID:1095114;Name=NP_639611.1;Note=unknown%2C len: 99aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639611.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	33050	37172	.	+	.	ID=id10179;Note=Appears to be the remnant of an integrated transposon Tn4811. Region previously sequenced as EMBL:AF204735 Streptomyces coelicolor A3(2) plasmid SCP1 transposon Tn4811  NADP-dependent oxidoreductase and  regulator genes%2C complete cds%3B and unknown genes%3B label: AF204735;gbkey=misc_feature
NC_003903.1	RefSeq	gene	33166	34080	.	-	.	ID=gene7945;Dbxref=GeneID:1095115;Name=SCP1.36c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.36c
NC_003903.1	RefSeq	CDS	33166	34080	.	-	0	ID=cds7802;Parent=gene7945;Dbxref=Genbank:NP_639612.1,GeneID:1095115;Name=NP_639612.1;Note=possible AraC-family transcriptional regulator%2C len: 304aa%3B previously sequenced as TR:Q9L8G9 (EMBL:AF204735). Similar to many eg. from streptomycetes eg. SW:Q03320 (ARAL_STRAT)  AraC-like transcription regulator from Tn4811-homologous locus in Streptomyces antibioticus (303 aa) fasta scores%3B opt: 1769%2C z-score: 2065.7%2C E(): 0%2C 88.5%25 identity in 304 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C Prosite match to PS00041 Bacterial regulatory proteins%2C araC family signature and helix-turn-helix motif (Score 1345 (+3.77 SD)) at residue 216-237.;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=NP_639612.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	33178	33438	.	-	.	ID=id10180;Dbxref=GeneID:1095115;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 125.10%2C E-value 1.3e-33;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	33199	33327	.	-	.	ID=id10181;Dbxref=GeneID:1095115;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	34087	34091	.	-	.	ID=id10182;gbkey=RBS
NC_003903.1	RefSeq	gene	34167	35162	.	+	.	ID=gene7946;Dbxref=GeneID:1095116;Name=SCP1.37;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.37
NC_003903.1	RefSeq	CDS	34167	35162	.	+	0	ID=cds7803;Parent=gene7946;Dbxref=Genbank:NP_639613.1,GeneID:1095116;Name=NP_639613.1;Note=probable short-chain oxidoreductase%2C len: 331aa%3B previously sequenced as TR:Q9L8H0 (EMBL:AF204735). Also similar to many others eg. TR:Q9RR99 (EMBL:AE002088) oxidoreductase%2C short-chain dehydrogenase/reductase family from Deinococcus radiodurans (336 aa) fasta scores%3B opt: 795%2C z-score: 899.7%2C E(): 0%2C 44.7%25 identity in 320 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=CDS;product=short-chain oxidoreductase;protein_id=NP_639613.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	34284	34865	.	+	.	ID=id10183;Dbxref=GeneID:1095116;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 107.20%2C E-value 3.2e-28;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	34719	34805	.	+	.	ID=id10184;Dbxref=GeneID:1095116;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature
NC_003903.1	RefSeq	gene	35455	36417	.	-	.	ID=gene7947;Dbxref=GeneID:1095117;Name=SCP1.38c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.38c
NC_003903.1	RefSeq	CDS	35455	36417	.	-	0	ID=cds7804;Parent=gene7947;Dbxref=Genbank:NP_639614.1,GeneID:1095117;Name=NP_639614.1;Note=probable transposase%2C len: 320aa%3B previously sequenced as TR:Q9L8H1 (EMBL:AF204735). Also similar to many others eg. TR:Q9R9Q9 (EMBL:AF144039)  transposase from Rhizobium meliloti (Sinorhizobium meliloti) (277 aa) fasta scores%3B opt: 734%2C z-score: 824.2%2C E(): 0%2C 44.3%25 identity in 262 aa overlap. Also similar to SCP1.82 fasta scores%3B opt: 1219%2C z-score: 1504.5%2C E(): 0%2C 64.0%25 identity in 275 aa overlap. Contains Pfam match to entry PF01511 Transposase_6%2C Transposase and Pfam match to entry PF01675 Transposase_13%2C Transposase.;gbkey=CDS;product=transposase;protein_id=NP_639614.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	35620	37143	.	-	.	ID=id10185;Note=Inverted and (degenerately) repeated at 79749..81248. Inverted and (perfectly) repeated at 318881..320404;gbkey=repeat_region
NC_003903.1	RefSeq	sequence_feature	35653	35904	.	-	.	ID=id10186;Dbxref=GeneID:1095117;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 177.60%2C E-value 2e-49;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	36034	36288	.	-	.	ID=id10187;Dbxref=GeneID:1095117;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 183.10%2C E-value 4.4e-51;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	36422	36426	.	-	.	ID=id10188;gbkey=RBS
NC_003903.1	RefSeq	gene	36486	36905	.	-	.	ID=gene7948;Dbxref=GeneID:1095118;Name=SCP1.39c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.39c
NC_003903.1	RefSeq	CDS	36486	36905	.	-	0	ID=cds7805;Parent=gene7948;Dbxref=Genbank:NP_639615.1,GeneID:1095118;Name=NP_639615.1;Note=unknown%2C len: 139aa%3B previously sequenced as TR:Q9L8H2 (EMBL:AF204735). Strongly similar to TR:Q54403 (EMBL:Z11519) hypothetical protein from transposon Tn4811 of Streptomyces lividans (138 aa) fasta scores%3B opt:  858%2C z-score: 1093.1%2C E(): 0%2C 95.7%25 identity in 139 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639615.1;transl_table=11
NC_003903.1	RefSeq	gene	36908	37165	.	-	.	ID=gene7949;Dbxref=GeneID:1095119;Name=SCP1.40c;end_range=37165,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.40c;partial=true
NC_003903.1	RefSeq	CDS	36908	37165	.	-	0	ID=cds7806;Parent=gene7949;Dbxref=Genbank:NP_639616.1,GeneID:1095119;Name=NP_639616.1;Note=unknown%2C partial CDS%2C len: 85aa%3B appears to have been truncated by an insertion/excision event. previously sequenced as TR:Q9L8H3 (EMBL:AF204735). Also identical to the C-terminus of the larger TR:Q54402 (EMBL:Z11519) hypothetical protein from transposon Tn4811 of Streptomyces lividans (336 aa) fasta scores%3B opt:  472%2C z-score: 637.5%2C E(): 4.8e-28%2C 100.0%25 identity in 85 aa overlap.;end_range=37165,.;gbkey=CDS;partial=true;product=hypothetical protein;protein_id=NP_639616.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	37171	37860	.	+	.	ID=id10189;Note=Inverted repeat spanning region of non-coding DNA. Score 58: 22/24 ( 91%25) matches%2C 0 gaps. May be associated with the truncation of CDS SCP1.40c.;gbkey=stem_loop
NC_003903.1	RefSeq	gene	37969	39204	.	-	.	ID=gene7950;Dbxref=GeneID:1095120;Name=SCP1.41c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.41c
NC_003903.1	RefSeq	CDS	37969	39204	.	-	0	ID=cds7807;Parent=gene7950;Dbxref=Genbank:NP_639617.1,GeneID:1095120;Name=NP_639617.1;Note=unknown%2C len: 411aa%3B weakly similar to many eg. TR:Q9L195 (EMBL:AL158057) hypothetical protein from Streptomyces coelicolor (437 aa) fasta scores%3B opt: 476%2C z-score: 570.6%2C E(): 2.6e-24%2C 32.7%25 identity in 327 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639617.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	38650	40716	.	-	.	ID=id10190;Note=Previously sequenced as EMBL:AB042603 [nt complement(39385..40716) forms the right junction between the integrated SCP1 and the chromosome in Streptomyces coelicolor strain A634]%3B label: AB042603;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	39211	39218	.	-	.	ID=id10191;gbkey=RBS
NC_003903.1	RefSeq	gene	40107	40754	.	-	.	ID=gene7951;Dbxref=GeneID:1095121;Name=SCP1.42c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.42c
NC_003903.1	RefSeq	CDS	40107	40754	.	-	0	ID=cds7808;Parent=gene7951;Dbxref=Genbank:NP_639618.1,GeneID:1095121;Name=NP_639618.1;Note=possible TetR-family regulator%2C len: 215aa%3B similar to many eg. TR:Q9L2D0 (EMBL:AL137187)  TetR-family transcriptional regulator from Streptomyces coelicolor (194 aa) fasta scores%3B opt: 317%2C z-score: 374.6%2C E(): 2.1e-13%2C 34.5%25 identity in 206 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=CDS;product=TetR family regulatory protein;protein_id=NP_639618.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	40557	40697	.	-	.	ID=id10192;Dbxref=GeneID:1095121;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.40%2C E-value 4e-10;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	40763	40768	.	-	.	ID=id10193;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	40923	40927	.	+	.	ID=id10194;gbkey=RBS
NC_003903.1	RefSeq	gene	40935	41750	.	+	.	ID=gene7952;Dbxref=GeneID:1095122;Name=SCP1.43;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.43
NC_003903.1	RefSeq	CDS	40935	41750	.	+	0	ID=cds7809;Parent=gene7952;Dbxref=Genbank:NP_639619.1,GeneID:1095122;Name=NP_639619.1;Note=possible short-chain oxidoreductase%2C len: 271aa%3B similar to many proposed oxidoreductase eg. SW:P37959 (YUSZ_BACSU) hypothetical oxidoreductase from Bacillus subtilis (280 aa) fasta scores%3B opt: 441%2C z-score: 502.6%2C E(): 1.6e-20%2C 33.6%25 identity in 274 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=CDS;product=short chain dehydrogenase;protein_id=NP_639619.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	40950	41480	.	+	.	ID=id10195;Dbxref=GeneID:1095122;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 210.30%2C E-value 3e-59;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	41481	41504	.	+	.	ID=id10196;Dbxref=GeneID:1095122;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	42345	42350	.	+	.	ID=id10197;gbkey=RBS
NC_003903.1	RefSeq	gene	42353	43369	.	+	.	ID=gene7953;Dbxref=GeneID:1095123;Name=SCP1.44;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.44
NC_003903.1	RefSeq	CDS	42353	43369	.	+	0	ID=cds7810;Parent=gene7953;Dbxref=Genbank:NP_639620.1,GeneID:1095123;Name=NP_639620.1;Note=possible oxidoreductase%2C len: 338aa%3B similar to many eg. TR:Q9RJW9 (EMBL:AL133210)  reductase (fragment) from Streptomyces coelicolor (311 aa) fasta scores%3B opt: 795%2C z-score: 852.7%2C E(): 0%2C 44.0%25 identity in 293 aa overlap and SW:O82864 (AHPF_PSEPU) alkyl hydroperoxide reductase subunit from Pseudomonas putida (520 aa) fasta scores%3B opt: 301%2C z-score: 325.3%2C E(): 1.2e-10%2C 25.6%25 identity in 301 aa overlap.;gbkey=CDS;product=oxidoreductase;protein_id=NP_639620.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	43453	43459	.	+	.	ID=id10198;gbkey=RBS
NC_003903.1	RefSeq	gene	43464	45101	.	+	.	ID=gene7954;Dbxref=GeneID:1095124;Name=SCP1.45;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.45
NC_003903.1	RefSeq	CDS	43464	45101	.	+	0	ID=cds7811;Parent=gene7954;Dbxref=Genbank:NP_639621.1,GeneID:1095124;Name=NP_639621.1;Note=possible integral membrane efflux protein%2C len: 545aa%3B similar to many eg. TR:Q9XE01 (EMBL:AB019519) VarS virginiamycin S resistance protein from Streptomyces virginiae (518 aa) fasta scores%3B opt: 1001%2C z-score: 1036.6%2C E(): 0%2C 36.8%25 identity in 522 aa overlap and TR:O54186 (EMBL:AL021411)  transport protein from Streptomyces coelicolor (533 aa) fasta scores%3B opt: 2830%2C z-score: 2920.7%2C E(): 0%2C 79.5%25 identity in 533 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=integral membrane efflux protein;protein_id=NP_639621.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	45248	45324	.	+	.	ID=id10199;Note=Inverted repeat. Score 67: 29/34 ( 85%25) matches%2C 0 gaps%2C 9 base loop.;gbkey=stem_loop
NC_003903.1	RefSeq	gene	45946	47966	.	-	.	ID=gene7955;Dbxref=GeneID:1095125;Name=SCP1.46c;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SCP1.46c;pseudo=true
NC_003903.1	RefSeq	sequence_feature	45946	47966	.	-	.	ID=id10200;Dbxref=GeneID:1095125;Note=pseudogene%2C unknown%2C len: 673aa%3B similar in regions to two hypothetical proteins found on plasmids - TR:O85873 (EMBL:AF079317) from plasmid pNL1 of Sphingomonas aromaticivorans (741 aa) fasta scores%3B opt: 310%2C z-score: 360.6%2C E(): 1.3e-12%2C 32.1%25 identity in 234 aa overlap and TR:Q9R6H6 (EMBL:AB016260) from plasmid pTi-SAKURA of Agrobacterium tumefaciens (716 aa) fasta scores%3B opt:  293%2C z-score: 341.1%2C E(): 1.6e-11%2C 32.9%25 identity in 222 aa overlap.;gbkey=misc_feature
NC_003903.1	RefSeq	gene	49731	50141	.	+	.	ID=gene7956;Dbxref=GeneID:1095126;Name=SCP1.47;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.47
NC_003903.1	RefSeq	CDS	49731	50141	.	+	0	ID=cds7812;Parent=gene7956;Dbxref=Genbank:NP_639622.1,GeneID:1095126;Name=NP_639622.1;Note=unknown%2C len: 136aa%3B similar to TR:Q9KY36 (EMBL:AL356892) hypothetical protein from Streptomyces coelicolor (111 aa) fasta scores%3B opt:  212%2C z-score: 263.6%2C E(): 3.3e-07%2C 37.0%25 identity in 108 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639622.1;transl_table=11
NC_003903.1	RefSeq	gene	50418	51074	.	-	.	ID=gene7957;Dbxref=GeneID:1095127;Name=SCP1.48c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.48c
NC_003903.1	RefSeq	CDS	50418	51074	.	-	0	ID=cds7813;Parent=gene7957;Dbxref=Genbank:NP_639623.1,GeneID:1095127;Name=NP_639623.1;Note=unknown%2C len: 218aa%3B N-terminal region weakly similar to many eg. SW:P71311 (YAIS_ECOLI) hypothetical protein from Escherichia coli (185 aa) fasta scores%3B opt:  221%2C z-score: 290.7%2C E():  1e-08%2C 28.7%25 identity in 164 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639623.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	51080	51086	.	-	.	ID=id10201;gbkey=RBS
NC_003903.1	RefSeq	gene	51118	52008	.	-	.	ID=gene7958;Dbxref=GeneID:1095128;Name=SCP1.49c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.49c
NC_003903.1	RefSeq	CDS	51118	52008	.	-	0	ID=cds7814;Parent=gene7958;Dbxref=Genbank:NP_639624.1,GeneID:1095128;Name=NP_639624.1;Note=unknown%2C len: 296aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639624.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	52021	52024	.	-	.	ID=id10202;gbkey=RBS
NC_003903.1	RefSeq	gene	52099	53301	.	-	.	ID=gene7959;Dbxref=GeneID:1095129;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=SCP1.50c
NC_003903.1	RefSeq	CDS	52099	53301	.	-	0	ID=cds7815;Parent=gene7959;Dbxref=Genbank:NP_639625.1,GeneID:1095129;Name=NP_639625.1;Note=spore associated protein%2C SapD%2C len: 296aa;gbkey=CDS;gene=sapD;product=spore associated protein%2C sapd;protein_id=NP_639625.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	53308	53314	.	-	.	ID=id10203;gbkey=RBS
NC_003903.1	RefSeq	gene	53318	53842	.	-	.	ID=gene7960;Dbxref=GeneID:1095130;Name=sapE;gbkey=Gene;gene=sapE;gene_biotype=protein_coding;locus_tag=SCP1.51c
NC_003903.1	RefSeq	CDS	53318	53842	.	-	0	ID=cds7816;Parent=gene7960;Dbxref=Genbank:NP_639626.1,GeneID:1095130;Name=NP_639626.1;Note=spore associated protein%2C SapE%2C len: 174aa%3B similar to many of undefined function eg. TR:Q9ZC37 (EMBL:AL031866) hypothetical protein from Yersinia pestis (180 aa) fasta scores%3B opt:  490%2C z-score: 646.6%2C E(): 1.5e-28%2C 47.8%25 identity in 157 aa overlap. Contains Pfam match to entry PF01575 MaoC_dehydratas%2C MaoC like domain.;gbkey=CDS;gene=sapE;product=spore associated protein%2C sape;protein_id=NP_639626.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	53405	53770	.	-	.	ID=id10204;Dbxref=GeneID:1095130;Note=Pfam match to entry PF01575 MaoC_dehydratas%2C MaoC like domain%2C score 31.50%2C E-value 1.3e-05;gbkey=misc_feature;gene=sapE
NC_003903.1	RefSeq	gene	53839	54702	.	-	.	ID=gene7961;Dbxref=GeneID:1095131;Name=SCP1.52c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.52c
NC_003903.1	RefSeq	CDS	53839	54702	.	-	0	ID=cds7817;Parent=gene7961;Dbxref=Genbank:NP_639627.1,GeneID:1095131;Name=NP_639627.1;Note=possible lysase%2C len: 287aa%3B similar to many eg. SW:P17725 (CILB_KLEPN) citrate lyase beta chain (EC 4.1.3.6) (289 aa) fasta scores%3B opt: 392%2C z-score: 446.6%2C E(): 2.1e-17%2C 31.5%25 identity in 286 aa overlap.;gbkey=CDS;product=lysase;protein_id=NP_639627.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	53850	53854	.	-	.	ID=id10205;Dbxref=GeneID:1095131;gbkey=RBS
NC_003903.1	RefSeq	gene	54699	55715	.	-	.	ID=gene7962;Dbxref=GeneID:1095132;Name=SCP1.53c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.53c
NC_003903.1	RefSeq	CDS	54699	55715	.	-	0	ID=cds7818;Parent=gene7962;Dbxref=Genbank:NP_639628.1,GeneID:1095132;Name=NP_639628.1;Note=catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid%3B involved in the degradation of phenylpropionate;gbkey=CDS;product=4-hydroxy-2-oxovalerate aldolase;protein_id=NP_639628.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	54710	54713	.	-	.	ID=id10206;Dbxref=GeneID:1095132;gbkey=RBS
NC_003903.1	RefSeq	sequence_feature	54885	55682	.	-	.	ID=id10207;Dbxref=GeneID:1095132;Note=Pfam match to entry PF00682 HMGL-like%2C HMGL-like%2C score 175.10%2C E-value 1.2e-48;gbkey=misc_feature
NC_003903.1	RefSeq	gene	55712	56593	.	-	.	ID=gene7963;Dbxref=GeneID:1095133;Name=SCP1.54c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.54c
NC_003903.1	RefSeq	CDS	55712	56593	.	-	0	ID=cds7819;Parent=gene7963;Dbxref=Genbank:NP_639629.1,GeneID:1095133;Name=NP_639629.1;Note=catalyzes the formation of acetyl-CoA from acetalaldehyde;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=NP_639629.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	55723	55728	.	-	.	ID=id10208;Dbxref=GeneID:1095133;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	56599	56602	.	-	.	ID=id10209;gbkey=RBS
NC_003903.1	RefSeq	gene	56620	57444	.	-	.	ID=gene7964;Dbxref=GeneID:1095134;Name=SCP1.55c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.55c
NC_003903.1	RefSeq	CDS	56620	57444	.	-	0	ID=cds7820;Parent=gene7964;Dbxref=Genbank:NP_639630.1,GeneID:1095134;Name=NP_639630.1;Note=probable hydratase%2C len: 274aa%3B similar to many eg. SW:P77608 (MHPD_ECOLI) 2-keto-4-pentenoate hydratase (EC 4.2.1.-) from Escherichia coli (269 aa) fasta scores%3B opt: 420%2C z-score: 525.4%2C E(): 8.5e-22%2C 34.3%25 identity in 245 aa overlap. Contains Pfam match to entry PF01689 Hyratase_decarb%2C Hydratase/decarboxylase.;gbkey=CDS;product=hydratase;protein_id=NP_639630.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	56731	57384	.	-	.	ID=id10210;Dbxref=GeneID:1095134;Note=Pfam match to entry PF01689 Hyratase_decarb%2C Hydratase/decarboxylase%2C score 127.90%2C E-value 1.9e-34;gbkey=misc_feature
NC_003903.1	RefSeq	gene	57441	57893	.	-	.	ID=gene7965;Dbxref=GeneID:1095135;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=SCP1.56c
NC_003903.1	RefSeq	CDS	57441	57893	.	-	0	ID=cds7821;Parent=gene7965;Dbxref=Genbank:NP_639631.1,GeneID:1095135;Name=NP_639631.1;Note=spore associated protein%2C SapC%2C len: 150aa%3B similar to TR:Q9KYK7 (EMBL:AL356593)  secreted protein from Streptomyces coelicolor (155 aa) fasta scores%3B opt: 346%2C z-score: 450.7%2C E(): 1.2e-17%2C 40.5%25 identity in 131 aa overlap. Contains a possible N-terminal signal sequence.;gbkey=CDS;gene=sapC;product=spore associated protein%2C sapc;protein_id=NP_639631.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	57450	57453	.	-	.	ID=id10211;Dbxref=GeneID:1095135;gbkey=RBS;gene=sapC
NC_003903.1	RefSeq	ribosome_entry_site	57900	57904	.	-	.	ID=id10212;gbkey=RBS
NC_003903.1	RefSeq	gene	57923	58462	.	-	.	ID=gene7966;Dbxref=GeneID:1095136;Name=SCP1.57c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.57c
NC_003903.1	RefSeq	CDS	57923	58462	.	-	0	ID=cds7822;Parent=gene7966;Dbxref=Genbank:NP_639632.1,GeneID:1095136;Name=NP_639632.1;Note=unknown%2C len: 179aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639632.1;transl_table=11
NC_003903.1	RefSeq	gene	58459	58902	.	-	.	ID=gene7967;Dbxref=GeneID:1095137;Name=SCP1.58c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.58c
NC_003903.1	RefSeq	CDS	58459	58902	.	-	0	ID=cds7823;Parent=gene7967;Dbxref=Genbank:NP_639633.1,GeneID:1095137;Name=NP_639633.1;Note=possible regulatory protein%2C len: 147aa%3B similar to others from Streptomyces coelicolor eg. TR:Q53897 (EMBL:X60316) AbaA pleiotropic regulatory protein from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 112%2C z-score: 149.1%2C E():  0.77%2C 31.7%25 identity in 120 aa overlap. Contains TTA encoded leucine at residue 11%2C possible target for bldA regulation.;gbkey=CDS;product=regulatory protein;protein_id=NP_639633.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	58467	58471	.	-	.	ID=id10213;Dbxref=GeneID:1095137;gbkey=RBS
NC_003903.1	RefSeq	sequence_feature	58870	58872	.	-	.	ID=id10214;Dbxref=GeneID:1095137;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	58912	58915	.	-	.	ID=id10215;gbkey=RBS
NC_003903.1	RefSeq	gene	58920	59396	.	-	.	ID=gene7968;Dbxref=GeneID:1095138;Name=SCP1.59c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.59c
NC_003903.1	RefSeq	CDS	58920	59396	.	-	0	ID=cds7824;Parent=gene7968;Dbxref=Genbank:NP_639634.1,GeneID:1095138;Name=NP_639634.1;Note=unknown%2C len: 145aa%3B similar to regions of others of undefined function eg. TR:Q9ZBJ0 (EMBL:AL035161) conserved hypothetical protein from Streptomyces coelicolor (860 aa) fasta scores%3B opt: 272%2C z-score: 347.5%2C E(): 6.9e-12%2C 39.4%25 identity in 127 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639634.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	59403	59406	.	-	.	ID=id10216;gbkey=RBS
NC_003903.1	RefSeq	promoter	59464	59465	.	-	.	ID=id10217;Note=transcriptional start site (pers.comm. Joe McCormick);gbkey=promoter
NC_003903.1	RefSeq	gene	59650	60522	.	+	.	ID=gene7969;Dbxref=GeneID:1095139;Name=SCP1.60;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.60
NC_003903.1	RefSeq	CDS	59650	60522	.	+	0	ID=cds7825;Parent=gene7969;Dbxref=Genbank:NP_639635.1,GeneID:1095139;Name=NP_639635.1;Note=possible conserved DNA-binding protein%2C len: 290aa%3B similar to many from streptomycetes eg. TR:Q9RHR7 (EMBL:AB025200) ORF312 protein from plasmid pNO33 of Streptomyces albulus (285 aa) fasta scores%3B opt: 857%2C z-score: 1027.5%2C E(): 0%2C and TR:Q9KZY5 (EMBL:AL353815)  DNA-binding protein from Streptomyces coelicolor (295 aa) fasta scores%3B opt: 706%2C z-score: 847.4%2C E(): 0%2C 40.8%25 identity in 282 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix.;gbkey=CDS;product=DNA-binding protein;protein_id=NP_639635.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	59695	59865	.	+	.	ID=id10218;Dbxref=GeneID:1095139;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 20.70%2C E-value 0.034;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	60506	60511	.	+	.	ID=id10219;Dbxref=GeneID:1095139;gbkey=RBS
NC_003903.1	RefSeq	gene	60519	60743	.	+	.	ID=gene7970;Dbxref=GeneID:1095140;Name=SCP1.61;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.61
NC_003903.1	RefSeq	CDS	60519	60743	.	+	0	ID=cds7826;Parent=gene7970;Dbxref=Genbank:NP_639636.1,GeneID:1095140;Name=NP_639636.1;Note=possible regulatory protein%2C len: 74aa%3B similar to many eg. TR:Q53896 (EMBL:X60316) AbaA pleiotropic regulatory protein from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 149%2C z-score: 226.2%2C E(): 3.9e-05%2C 40.4%25 identity in 57 aa overlap and TR:Q9RHR6 (EMBL:AB025200) ORF76 protein from plasmid pNO33 of Streptomyces albulus (76 aa) fasta scores%3B opt: 309%2C z-score: 448.7%2C E(): 1.6e-17%2C 60.3%25 identity in 73 aa overlap.;gbkey=CDS;product=regulatory protein;protein_id=NP_639636.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	61135	61140	.	+	.	ID=id10220;gbkey=RBS
NC_003903.1	RefSeq	gene	61144	61557	.	+	.	ID=gene7971;Dbxref=GeneID:1095141;Name=SCP1.62;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.62
NC_003903.1	RefSeq	CDS	61144	61557	.	+	0	ID=cds7827;Parent=gene7971;Dbxref=Genbank:NP_639637.1,GeneID:1095141;Name=NP_639637.1;Note=unknown%2C len: 137aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639637.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	61637	61640	.	+	.	ID=id10221;gbkey=RBS
NC_003903.1	RefSeq	gene	61655	63463	.	+	.	ID=gene7972;Dbxref=GeneID:1095142;Name=SCP1.63;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.63
NC_003903.1	RefSeq	CDS	61655	63463	.	+	0	ID=cds7828;Parent=gene7972;Dbxref=Genbank:NP_639638.1,GeneID:1095142;Name=NP_639638.1;Note=possible ATP/GTP-binding protein%2C len: 602aa%3B weakly similar to others from plasmids eg. TR:Q9XAX4 (EMBL:U88088) hypothetical protein from plasmid pRA2 of Pseudomonas alcaligenes (522 aa) fasta scores%3B opt: 263%2C z-score: 287.6%2C E(): 1.5e-08%2C 22.9%25 identity in 498 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639638.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	61760	61783	.	+	.	ID=id10222;Dbxref=GeneID:1095142;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	gene	63427	63702	.	-	.	ID=gene7973;Dbxref=GeneID:1095143;Name=SCP1.64c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.64c
NC_003903.1	RefSeq	CDS	63427	63702	.	-	0	ID=cds7829;Parent=gene7973;Dbxref=Genbank:NP_639639.1,GeneID:1095143;Name=NP_639639.1;Note=unknown%2C len: 91aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639639.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	63708	63712	.	-	.	ID=id10223;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	63888	63892	.	+	.	ID=id10224;gbkey=RBS
NC_003903.1	RefSeq	gene	63899	66577	.	+	.	ID=gene7974;Dbxref=GeneID:1095144;Name=SCP1.65;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.65
NC_003903.1	RefSeq	CDS	63899	66577	.	+	0	ID=cds7830;Parent=gene7974;Dbxref=Genbank:NP_639640.1,GeneID:1095144;Name=NP_639640.1;Note=possible ATP/GTP-binding protein%2C len: 892aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639640.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	64094	64117	.	+	.	ID=id10225;Dbxref=GeneID:1095144;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	gene	66588	66956	.	-	.	ID=gene7975;Dbxref=GeneID:1095145;Name=SCP1.66c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.66c
NC_003903.1	RefSeq	CDS	66588	66956	.	-	0	ID=cds7831;Parent=gene7975;Dbxref=Genbank:NP_639641.1,GeneID:1095145;Name=NP_639641.1;Note=unknown%2C len: 122aa%3B weakly similar to TR:Q9KXJ3 (EMBL:AL357591) hypothetical protein from Streptomyces coelicolor (128 aa) fasta scores%3B opt: 102%2C z-score: 146.2%2C E(): 1.1%2C 26.7%25 identity in 120 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639641.1;transl_table=11
NC_003903.1	RefSeq	gene	66959	67213	.	-	.	ID=gene7976;Dbxref=GeneID:1095146;Name=SCP1.67c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.67c
NC_003903.1	RefSeq	CDS	66959	67213	.	-	0	ID=cds7832;Parent=gene7976;Dbxref=Genbank:NP_639642.1,GeneID:1095146;Name=NP_639642.1;Note=unknown%2C len: 84aa%3B similar to SCP1.225 hypothetical protein (previously sequenced as TR:Q9JN71 (EMBL:AJ276673)) from this plasmid  fasta scores: E(): 1.1%2C 40.7%25 id in 81 aa.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639642.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	67215	67219	.	-	.	ID=id10226;gbkey=RBS
NC_003903.1	RefSeq	gene	67553	68452	.	+	.	ID=gene7977;Dbxref=GeneID:1095147;Name=SCP1.68;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.68
NC_003903.1	RefSeq	CDS	67553	68452	.	+	0	ID=cds7833;Parent=gene7977;Dbxref=Genbank:NP_639643.1,GeneID:1095147;Name=NP_639643.1;Note=possible conserved secreted protein%2C len: 299aa%3B similar to many eg. TR:Q9XAF8 (EMBL:AL079356) hypothetical protein from Streptomyces coelicolor (365 aa) fasta scores%3B opt:  999%2C z-score: 1101.9%2C E(): 0%2C 52.8%25 identity in 303 aa overlap. Contains a possible cleavable N-terminal signal sequence;gbkey=CDS;product=hypothetical protein;protein_id=NP_639643.1;transl_table=11
NC_003903.1	RefSeq	gene	68525	68872	.	-	.	ID=gene7978;Dbxref=GeneID:1095148;Name=SCP1.69c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.69c
NC_003903.1	RefSeq	CDS	68525	68872	.	-	0	ID=cds7834;Parent=gene7978;Dbxref=Genbank:NP_639644.1,GeneID:1095148;Name=NP_639644.1;Note=unknown%2C len: 115aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639644.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	68876	68881	.	-	.	ID=id10227;gbkey=RBS
NC_003903.1	RefSeq	gene	69221	69385	.	-	.	ID=gene7979;Dbxref=GeneID:1095149;Name=SCP1.70c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.70c
NC_003903.1	RefSeq	CDS	69221	69385	.	-	0	ID=cds7835;Parent=gene7979;Dbxref=Genbank:NP_639645.1,GeneID:1095149;Name=NP_639645.1;Note=doubtful CDS%2C unknown%2C len: 54aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639645.1;transl_table=11
NC_003903.1	RefSeq	gene	69453	69704	.	-	.	ID=gene7980;Dbxref=GeneID:1095150;Name=SCP1.71c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.71c
NC_003903.1	RefSeq	CDS	69453	69704	.	-	0	ID=cds7836;Parent=gene7980;Dbxref=Genbank:NP_639646.1,GeneID:1095150;Name=NP_639646.1;Note=unknown%2C len: 115aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639646.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	69711	69715	.	-	.	ID=id10228;gbkey=RBS
NC_003903.1	RefSeq	gene	69714	70379	.	-	.	ID=gene7981;Dbxref=GeneID:1095151;Name=SCP1.72c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.72c
NC_003903.1	RefSeq	CDS	69714	70379	.	-	0	ID=cds7837;Parent=gene7981;Dbxref=Genbank:NP_639647.1,GeneID:1095151;Name=NP_639647.1;Note=unknown%2C len: 115aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639647.1;transl_table=11
NC_003903.1	RefSeq	gene	70445	72058	.	-	.	ID=gene7982;Dbxref=GeneID:1095152;Name=SCP1.73c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.73c
NC_003903.1	RefSeq	CDS	70445	72058	.	-	0	ID=cds7838;Parent=gene7982;Dbxref=Genbank:NP_639648.1,GeneID:1095152;Name=NP_639648.1;Note=unknown%2C len: 537aa%3B weakly similar to TR:Q9L0Y7 (EMBL:AL159139) hypothetical protein from Streptomyces coelicolor (475 aa) fasta scores%3B opt: 141%2C z-score: 161.2%2C E():  0.16%2C 26.0%25 identity in 407 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639648.1;transl_table=11
NC_003903.1	RefSeq	gene	72284	73369	.	+	.	ID=gene7983;Dbxref=GeneID:1095153;Name=SCP1.74;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.74
NC_003903.1	RefSeq	CDS	72284	73369	.	+	0	ID=cds7839;Parent=gene7983;Dbxref=Genbank:NP_639649.1,GeneID:1095153;Name=NP_639649.1;Note=unknown%2C len: 361aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639649.1;transl_table=11
NC_003903.1	RefSeq	gene	73777	74073	.	-	.	ID=gene7984;Dbxref=GeneID:1095154;Name=SCP1.75c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.75c
NC_003903.1	RefSeq	CDS	73777	74073	.	-	0	ID=cds7840;Parent=gene7984;Dbxref=Genbank:NP_639650.1,GeneID:1095154;Name=NP_639650.1;Note=unknown%2C len: 98aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639650.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	74084	74087	.	-	.	ID=id10229;gbkey=RBS
NC_003903.1	RefSeq	sequence_feature	74805	75187	.	+	.	ID=id10230;Note=Previously sequenced as EMBL:S70702 [Region containing the inside end of the left terminal inverted repeat (TIR-L) of SCP1)]%3B label: S70702;gbkey=misc_feature
NC_003903.1	RefSeq	gene	74846	75391	.	-	.	ID=gene7985;Dbxref=GeneID:1095155;Name=SCP1.76c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.76c
NC_003903.1	RefSeq	CDS	74846	75391	.	-	0	ID=cds7841;Parent=gene7985;Dbxref=Genbank:NP_639651.1,GeneID:1095155;Name=NP_639651.1;Note=unknown%2C len: 181aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639651.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	75404	75407	.	-	.	ID=id10231;gbkey=RBS
NC_003903.1	RefSeq	gene	75615	76277	.	-	.	ID=gene7986;Dbxref=GeneID:1095156;Name=SCP1.77c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.77c
NC_003903.1	RefSeq	CDS	75615	76277	.	-	0	ID=cds7842;Parent=gene7986;Dbxref=Genbank:NP_639652.1,GeneID:1095156;Name=NP_639652.1;Note=possible membrane protein%2C len: 220aa%3B note possible downstream alternative translational start sites. Contains possible membrane-spanning hydrophobic region in the N-terminal.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639652.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	76290	76293	.	-	.	ID=id10232;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	76323	76328	.	+	.	ID=id10233;gbkey=RBS
NC_003903.1	RefSeq	gene	76340	77068	.	+	.	ID=gene7987;Dbxref=GeneID:1095157;Name=SCP1.78;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.78
NC_003903.1	RefSeq	CDS	76340	77068	.	+	0	ID=cds7843;Parent=gene7987;Dbxref=Genbank:NP_639653.1,GeneID:1095157;Name=NP_639653.1;Note=unknown%2C len: 242aa%3B contains Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639653.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	76676	76960	.	+	.	ID=id10234;Dbxref=GeneID:1095157;Note=Pfam match to entry PF00583 Acetyltransf%2C Acetyltransferase (GNAT) family%2C score 34.20%2C E-value 2.9e-06;gbkey=misc_feature
NC_003903.1	RefSeq	gene	77911	82391	.	-	.	ID=gene7988;Dbxref=GeneID:1095158;Name=SCP1.79c;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SCP1.79c;pseudo=true
NC_003903.1	RefSeq	sequence_feature	77911	82391	.	-	.	ID=id10235;Dbxref=GeneID:1095158;Note=pseudogene%2C function unknown%2C no significant database similarities%2C coordinates based on Frameplot%2C may have been interrupted by insertion of transposon Tn5714%2C len: 173aa%3Bhypothetical protein (pseudogene);gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	78427	78429	.	+	.	ID=id10236;Note=3 base direct repeat bordering transposon Tn5714;gbkey=repeat_region
NC_003903.1	RefSeq	sequence_feature	78430	81941	.	+	.	ID=id10237;Note=Tn5714 (pers. comm. Joe McCormick). Related to Tn4811 found in Streptomyces lividans and (remnants) in the TIRs of this plasmid.;gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	78430	78440	.	+	.	ID=id10238;Note=Inverted and repeated imperfectly at 81931..81941;gbkey=repeat_region
NC_003903.1	RefSeq	ribosome_entry_site	78984	78988	.	+	.	ID=id10239;gbkey=RBS
NC_003903.1	RefSeq	gene	78993	79994	.	+	.	ID=gene7989;Dbxref=GeneID:1095159;Name=SCP1.80;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.80
NC_003903.1	RefSeq	CDS	78993	79994	.	+	0	ID=cds7844;Parent=gene7989;Dbxref=Genbank:NP_639654.1,GeneID:1095159;Name=NP_639654.1;Note=unknown%2C len: 333aa%3B full length similarity with TR:Q54402 (EMBL:Z11519) hypothetical protein from transposable element%2C Tn4811 of Streptomyces lividans 66 (336 aa) fasta scores%3B opt: 1080%2C z-score: 1214.2%2C E(): 0%2C 49.0%25 identity in 335 aa overlap. C-terminal similar to SCP1.40c/SCP1.314 (previously sequenced as TR:Q9L8H3 (EMBL:AF204735)) (87 aa) fasta scores%3B opt: 311%2C z-score: 364.2%2C E(): 8e-13%2C 50.0%25 identity in 82 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639654.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	79749	81248	.	+	.	ID=id10240;Note=Inverted and (degenerately) repeated at complement(35620..37143). Directly (degenerately) repeated at 318881..320402.;gbkey=repeat_region
NC_003903.1	RefSeq	gene	79999	80421	.	+	.	ID=gene7990;Dbxref=GeneID:1095160;Name=SCP1.81;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.81
NC_003903.1	RefSeq	CDS	79999	80421	.	+	0	ID=cds7845;Parent=gene7990;Dbxref=Genbank:NP_639655.1,GeneID:1095160;Name=NP_639655.1;Note=unknown%2C len: 140aa%3B similar to TR:Q54403 (EMBL:Z11519) hypothetical protein from transposable element%2C Tn4811 of Streptomyces lividans 66 (138 aa) fasta scores%3B opt: 350%2C z-score: 452.4%2C E(): 9.8e-18%2C 43.0%25 identity in 135 aa overlap. Also similar to SCP1.39c/SCP1.315 (previously sequenced as TR:Q9L8H2 (EMBL:AF204735)) (139 aa) fasta scores%3B opt: 348%2C z-score: 449.9%2C E(): 1.4e-17%2C 43.4%25 identity in 136 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639655.1;transl_table=11
NC_003903.1	RefSeq	gene	80439	81284	.	+	.	ID=gene7991;Dbxref=GeneID:1095161;Name=SCP1.82;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.82
NC_003903.1	RefSeq	CDS	80439	81284	.	+	0	ID=cds7846;Parent=gene7991;Dbxref=Genbank:NP_639656.1,GeneID:1095161;Name=NP_639656.1;Note=probable transposon Tn5714 transposase%2C len: 281aa%3B similar to many eg. TR:Q54404 (EMBL:Z11519) from transposable element%2C Tn4811 of Streptomyces lividans 66 (320 aa) fasta scores%3B opt: 1224%2C z-score: 1510.7%2C E(): 0%2C 64.4%25 identity in 275 aa overlap and TR:Q44580 (EMBL:M98778) transposase from IS1031 element of Acetobacter xylinum. Also similar to SCP1.38c/SCP1.316 in the TIRs (previously sequenced as TR:Q9L8H1 (EMBL:AF204735)) (320 aa) fasta scores%3B opt: 1219%2C z-score: 1504.5%2C E(): 0%2C 64.0%25 identity in 275 aa overlap. Contains Pfam match to entry PF01675 Transposase_13%2C Transposase and Pfam match to entry PF01511 Transposase_6%2C Transposase.;gbkey=CDS;product=transposon Tn5714 transposase;protein_id=NP_639656.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	80580	80834	.	+	.	ID=id10241;Dbxref=GeneID:1095161;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 130.50%2C E-value 3.2e-35;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	80964	81215	.	+	.	ID=id10242;Dbxref=GeneID:1095161;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 130.80%2C E-value 2.5e-35;gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	81931	81941	.	+	.	ID=id10243;Note=Inverted and repeated imperfectly at 78430..78440;gbkey=repeat_region
NC_003903.1	RefSeq	repeat_region	81942	81944	.	+	.	ID=id10244;Note=3 base direct repeat bordering transposon Tn5714;gbkey=repeat_region
NC_003903.1	RefSeq	gene	82970	83170	.	+	.	ID=gene7992;Dbxref=GeneID:1095162;Name=SCP1.85;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.85
NC_003903.1	RefSeq	CDS	82970	83170	.	+	0	ID=cds7847;Parent=gene7992;Dbxref=Genbank:NP_639657.1,GeneID:1095162;Name=NP_639657.1;Note=possible membrane protein%2C len: 439aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639657.1;transl_table=11
NC_003903.1	RefSeq	gene	83371	84711	.	-	.	ID=gene7993;Dbxref=GeneID:1095163;Name=SCP1.85c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.85c
NC_003903.1	RefSeq	CDS	83371	84711	.	-	0	ID=cds7848;Parent=gene7993;Dbxref=Genbank:NP_639658.1,GeneID:1095163;Name=NP_639658.1;Note=possible secreted protein%2C len: 439aa%3B contains possible cleavable N-terminal signal sequence.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639658.1;transl_table=11
NC_003903.1	RefSeq	gene	85408	85683	.	+	.	ID=gene7994;Dbxref=GeneID:1095164;Name=SCP1.86;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.86
NC_003903.1	RefSeq	CDS	85408	85683	.	+	0	ID=cds7849;Parent=gene7994;Dbxref=Genbank:NP_639659.1,GeneID:1095164;Name=NP_639659.1;Note=unknown%2C len: 91aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639659.1;transl_table=11
NC_003903.1	RefSeq	gene	85719	86630	.	-	.	ID=gene7995;Dbxref=GeneID:1095165;Name=SCP1.87c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.87c
NC_003903.1	RefSeq	CDS	85719	86630	.	-	0	ID=cds7850;Parent=gene7995;Dbxref=Genbank:NP_639660.1,GeneID:1095165;Name=NP_639660.1;Note=possible oxidoreductase%2C len: 303aa%3B weakly similar to many eg. TR:O54079 (EMBL:AJ223781) thioredoxin reductase (EC 1.6.4.5) from Staphylococcus aureus (311 aa) fasta scores%3B opt: 250%2C z-score: 285.3%2C E(): 2e-08%2C 27.3%25 identity in 311 aa overlap.;gbkey=CDS;product=oxidoreductase;protein_id=NP_639660.1;transl_table=11
NC_003903.1	RefSeq	gene	86627	87208	.	-	.	ID=gene7996;Dbxref=GeneID:1095166;Name=SCP1.88c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.88c
NC_003903.1	RefSeq	CDS	86627	87208	.	-	0	ID=cds7851;Parent=gene7996;Dbxref=Genbank:NP_639661.1,GeneID:1095166;Name=NP_639661.1;Note=possible hydrolase%2C len: 193aa%3B weakly similar to many eg. TR:Q9X8G0 (EMBL:AL049819)  hydrolase from Streptomyces coelicolor (193 aa) fasta scores%3B opt: 177%2C z-score: 224.6%2C E(): 4.8e-05%2C 30.7%25 identity in 153 aa overlap and SW:O07900 (VIBB_VIBCH) vibriobactin-specific isochorismatase (EC 3.3.2.1) (293 aa) fasta scores%3B opt: 163%2C z-score: 205.0%2C E(): 0.0006%2C 23.9%25 identity in 180 aa overlap. Contains Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family.;gbkey=CDS;product=hydrolase;protein_id=NP_639661.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	86638	86643	.	-	.	ID=id10245;Dbxref=GeneID:1095166;gbkey=RBS
NC_003903.1	RefSeq	sequence_feature	86726	87172	.	-	.	ID=id10246;Dbxref=GeneID:1095166;Note=Pfam match to entry PF00857 Isochorismatase%2C Isochorismatase family%2C score 31.50%2C E-value 4.9e-08;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	87196	87202	.	-	.	ID=id10247;Dbxref=GeneID:1095166;gbkey=RBS
NC_003903.1	RefSeq	gene	87214	88383	.	-	.	ID=gene7997;Dbxref=GeneID:1095167;Name=SCP1.89c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.89c
NC_003903.1	RefSeq	CDS	87214	88383	.	-	0	ID=cds7852;Parent=gene7997;Dbxref=Genbank:NP_639662.1,GeneID:1095167;Name=NP_639662.1;Note=unknown%2C len: 389aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639662.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	88389	88396	.	-	.	ID=id10248;gbkey=RBS
NC_003903.1	RefSeq	gene	88591	89277	.	-	.	ID=gene7998;Dbxref=GeneID:1095168;Name=SCP1.90c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.90c
NC_003903.1	RefSeq	CDS	88591	89277	.	-	0	ID=cds7853;Parent=gene7998;Dbxref=Genbank:NP_639663.1,GeneID:1095168;Name=NP_639663.1;Note=possible ATP/GTP-binding protein%2C len: 228aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639663.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	89080	89103	.	-	.	ID=id10249;Dbxref=GeneID:1095168;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	gene	89274	90032	.	-	.	ID=gene7999;Dbxref=GeneID:1095169;Name=SCP1.91c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.91c
NC_003903.1	RefSeq	CDS	89274	90032	.	-	0	ID=cds7854;Parent=gene7999;Dbxref=Genbank:NP_639664.1,GeneID:1095169;Name=NP_639664.1;Note=possible GntR-family transcriptional regulator%2C len: 252aa%3B similar to many from extrachromosomal genetic elements eg. TR:Q9RIQ2 (EMBL:AJ243257) KorA protein from plasmid pSNA1 of Streptomyces natalensis (245 aa) fasta scores%3B opt: 477%2C z-score: 554.9%2C E(): 1.9e-23%2C 37.9%25 identity in 243 aa overlap and SW:P22405 (KORA_STRLI) KorA protein from plasmid pIJ101 of Streptomyces lividans (241 aa) fasta scores%3B opt: 393%2C z-score: 459.0%2C E(): 4.3e-18%2C 34.9%25 identity in 235 aa overlap. Contains Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family and helix-turn-helix motif (Score 984 (+2.54 SD)) at residue 36-57.;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=NP_639664.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	89283	89287	.	-	.	ID=id10250;Dbxref=GeneID:1095169;gbkey=RBS
NC_003903.1	RefSeq	sequence_feature	89808	89987	.	-	.	ID=id10251;Dbxref=GeneID:1095169;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 44.30%2C E-value 3.9e-12;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	90042	90048	.	-	.	ID=id10252;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	90408	90414	.	+	.	ID=id10253;gbkey=RBS
NC_003903.1	RefSeq	gene	90418	91026	.	+	.	ID=gene8000;Dbxref=GeneID:1095170;Name=SCP1.92;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.92
NC_003903.1	RefSeq	CDS	90418	91026	.	+	0	ID=cds7855;Parent=gene8000;Dbxref=Genbank:NP_639665.1,GeneID:1095170;Name=NP_639665.1;Note=unknown%2C len: 202aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639665.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	91039	91096	.	+	.	ID=id10254;Note=Score 71: 25/26 ( 96%25) matches%2C 0 gaps%2C 7 base loop;gbkey=stem_loop
NC_003903.1	RefSeq	gene	91528	91956	.	+	.	ID=gene8001;Dbxref=GeneID:1095171;Name=SCP1.93;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.93
NC_003903.1	RefSeq	CDS	91528	91956	.	+	0	ID=cds7856;Parent=gene8001;Dbxref=Genbank:NP_639666.1,GeneID:1095171;Name=NP_639666.1;Note=doubtful CDS%2C unknown%2C len: 142aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639666.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	92136	92139	.	+	.	ID=id10255;gbkey=RBS
NC_003903.1	RefSeq	gene	92149	92322	.	+	.	ID=gene8002;Dbxref=GeneID:1095172;Name=SCP1.94;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.94
NC_003903.1	RefSeq	CDS	92149	92322	.	+	0	ID=cds7857;Parent=gene8002;Dbxref=Genbank:NP_639667.1,GeneID:1095172;Name=NP_639667.1;Note=unknown%2C len: 57aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639667.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	92473	92477	.	+	.	ID=id10256;gbkey=RBS
NC_003903.1	RefSeq	gene	92483	92791	.	+	.	ID=gene8003;Dbxref=GeneID:1095173;Name=SCP1.95;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.95
NC_003903.1	RefSeq	CDS	92483	92791	.	+	0	ID=cds7858;Parent=gene8003;Dbxref=Genbank:NP_639668.1,GeneID:1095173;Name=NP_639668.1;Note=possible regulatory protein%2C len: 102aa%3B similar to many from actinomycets eg. TR:Q53963 (EMBL:X62287) WhiB regulatory protein from Streptomyces coelicolor (87 aa) fasta scores%3B opt: 225%2C z-score: 313.5%2C E(): 5.4e-10%2C 41.1%25 identity in 90 aa overlap and TR:Q50710 (EMBL:Z77165)  regulatory protein from Mycobacterium tuberculosis (102 aa) fasta scores%3B opt: 244%2C z-score: 337.4%2C E(): 2.5e-11%2C 50.0%25 identity in 78 aa overlap.;gbkey=CDS;product=regulatory protein;protein_id=NP_639668.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	92925	92928	.	+	.	ID=id10257;gbkey=RBS
NC_003903.1	RefSeq	gene	92934	93173	.	+	.	ID=gene8004;Dbxref=GeneID:1095174;Name=SCP1.96;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.96
NC_003903.1	RefSeq	CDS	92934	93173	.	+	0	ID=cds7859;Parent=gene8004;Dbxref=Genbank:NP_639669.1,GeneID:1095174;Name=NP_639669.1;Note=unknown%2C len: 79aa%3B weakly similar to TR:Q54341 (EMBL:M18244) hypothetical protein from Streptomyces limosus (Streptomyces albidoflavus) (57 aa) fasta scores%3B opt: 82%2C z-score: 132.4%2C E(): 6.6%2C 41.7%25 identity in 48 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639669.1;transl_table=11
NC_003903.1	RefSeq	gene	93231	93647	.	+	.	ID=gene8005;Dbxref=GeneID:1095175;Name=SCP1.97;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.97
NC_003903.1	RefSeq	CDS	93231	93647	.	+	0	ID=cds7860;Parent=gene8005;Dbxref=Genbank:NP_639670.1,GeneID:1095175;Name=NP_639670.1;Note=unknown%2C len: 138aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639670.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	93696	93702	.	+	.	ID=id10258;gbkey=RBS
NC_003903.1	RefSeq	gene	93707	95878	.	+	.	ID=gene8006;Dbxref=GeneID:1095176;Name=SCP1.98;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.98
NC_003903.1	RefSeq	CDS	93707	95878	.	+	0	ID=cds7861;Parent=gene8006;Dbxref=Genbank:NP_639671.1,GeneID:1095176;Name=NP_639671.1;Note=possible large ala-rich protein%2C len: 723aa%3B N-terminal half contains multiple possible coiled-coil regions.;gbkey=CDS;product=large alanine-rich protein;protein_id=NP_639671.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	95989	95995	.	+	.	ID=id10259;gbkey=RBS
NC_003903.1	RefSeq	gene	96001	96492	.	+	.	ID=gene8007;Dbxref=GeneID:1095177;Name=SCP1.99;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.99
NC_003903.1	RefSeq	CDS	96001	96492	.	+	0	ID=cds7862;Parent=gene8007;Dbxref=Genbank:NP_639672.1,GeneID:1095177;Name=NP_639672.1;Note=unknown%2C len: 163aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639672.1;transl_table=11
NC_003903.1	RefSeq	gene	96676	99111	.	+	.	ID=gene8008;Dbxref=GeneID:1095178;Name=SCP1.100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.100
NC_003903.1	RefSeq	CDS	96676	99111	.	+	0	ID=cds7863;Parent=gene8008;Dbxref=Genbank:NP_639673.1,GeneID:1095178;Name=NP_639673.1;Note=possible ATP/GTP-binding Gly/Ala-rich protein%2C len: 811aa%3B contains possible coiled-coil region at 428-444 residues. Also contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding gly/ala-rich protein;protein_id=NP_639673.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	97675	97698	.	+	.	ID=id10260;Dbxref=GeneID:1095178;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	99113	99120	.	+	.	ID=id10261;gbkey=RBS
NC_003903.1	RefSeq	gene	99127	99540	.	+	.	ID=gene8009;Dbxref=GeneID:1095179;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=SCP1.101
NC_003903.1	RefSeq	CDS	99127	99540	.	+	0	ID=cds7864;Parent=gene8009;Dbxref=Genbank:NP_639674.1,GeneID:1095179;Name=NP_639674.1;Note=possible plasmid transfer protein%2C len: 137aa%3B similar to TR:Q06257 (EMBL:X72857) TraB protein from plasmid SCP2 of Streptomyces coelicolor (137 aa) fasta scores%3B opt: 142%2C z-score: 180.4%2C E(): 0.014%2C 29.4%25 identity in 136 aa overlap. Contains possible coiled-coil region at 26-39 residues.;gbkey=CDS;gene=traB;product=plasmid transfer protein;protein_id=NP_639674.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	99610	99614	.	+	.	ID=id10262;gbkey=RBS
NC_003903.1	RefSeq	gene	99624	101732	.	+	.	ID=gene8010;Dbxref=GeneID:1095180;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=SCP1.102
NC_003903.1	RefSeq	CDS	99624	101732	.	+	0	ID=cds7865;Parent=gene8010;Dbxref=Genbank:NP_639675.1,GeneID:1095180;Name=NP_639675.1;Note=possible plasmid transfer protein%2C (ATP/GTP-binding)%2C len: 702aa%3B regions of similarity to proteins from other streptomycete plasmids. N-terminal similar to TR:Q07193 (EMBL:Z19593) SpdA protein from plasmid pSAM2 of Streptomyces ambofaciens (224 aa) blastp scores: Identities %3D 32/84 (38%25)%2C Positives %3D 38/84 (45%25). C-terminal region similar to TR:Q06256 (EMBL:X72857) TraA protein from plasmid SCP2 of Streptomyces coelicolor (442 aa) blastp scores: Identities %3D 73/285 (25%25)%2C Positives %3D 130/285 (45%25). Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=traA;product=plasmid transfer protein%2C (atp/GTP-binding);protein_id=NP_639675.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	100752	100775	.	+	.	ID=id10263;Dbxref=GeneID:1095180;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=traA
NC_003903.1	RefSeq	ribosome_entry_site	102053	102057	.	+	.	ID=id10264;gbkey=RBS
NC_003903.1	RefSeq	gene	102063	102596	.	+	.	ID=gene8011;Dbxref=GeneID:1095181;Name=SCP1.103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.103
NC_003903.1	RefSeq	CDS	102063	102596	.	+	0	ID=cds7866;Parent=gene8011;Dbxref=Genbank:NP_639676.1,GeneID:1095181;Name=NP_639676.1;Note=unknown%2C len: 177aa%3B weakly similar to TR:Q9L158 (EMBL:AL158060) hypothetical protein from Streptomyces coelicolor (132 aa) fasta scores%3B opt: 125%2C z-score: 165.0%2C E(): 0.1%2C 33.3%25 identity in 129 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639676.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	102849	102852	.	+	.	ID=id10265;gbkey=RBS
NC_003903.1	RefSeq	gene	102859	103323	.	+	.	ID=gene8012;Dbxref=GeneID:1095182;Name=SCP1.104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.104
NC_003903.1	RefSeq	CDS	102859	103323	.	+	0	ID=cds7867;Parent=gene8012;Dbxref=Genbank:NP_639677.1,GeneID:1095182;Name=NP_639677.1;Note=unknown%2C len: 154aa%3B weakly similar to SW:P71686 (YE17_MYCTU) fasta scores%3B opt: 113%2C z-score: 145.5%2C E(): 1.2%2C 33.6%25 identity in 107 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639677.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	103332	103335	.	+	.	ID=id10266;gbkey=RBS
NC_003903.1	RefSeq	gene	103344	103805	.	+	.	ID=gene8013;Dbxref=GeneID:1095183;Name=SCP1.105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.105
NC_003903.1	RefSeq	CDS	103344	103805	.	+	0	ID=cds7868;Parent=gene8013;Dbxref=Genbank:NP_639678.1,GeneID:1095183;Name=NP_639678.1;Note=possible integral membrane plasmid transfer protein%2C len: 153aa%3B similar to TR:Q57241 (EMBL:U23762) SpbB3 protein (involved in intramycelial plasmid spread) from plasmid pJV1 of Streptomyces phaeochromogenes (147 aa) fasta scores%3B opt: 317%2C z-score: 394.0%2C E(): 1.8e-14%2C 46.5%25 identity in 142 aa overlap.;gbkey=CDS;product=integral membrane plasmid transfer protein;protein_id=NP_639678.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	103835	103839	.	+	.	ID=id10267;gbkey=RBS
NC_003903.1	RefSeq	gene	103846	104439	.	+	.	ID=gene8014;Dbxref=GeneID:1095184;Name=SCP1.106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.106
NC_003903.1	RefSeq	CDS	103846	104439	.	+	0	ID=cds7869;Parent=gene8014;Dbxref=Genbank:NP_639679.1,GeneID:1095184;Name=NP_639679.1;Note=unknown%2C len: 197aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639679.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	104442	104518	.	+	.	ID=id10268;Note=Score 61: 31/36 ( 86%25) matches%2C 1 gaps%2C 4 base loop;gbkey=stem_loop
NC_003903.1	RefSeq	ribosome_entry_site	104540	104547	.	+	.	ID=id10269;gbkey=RBS
NC_003903.1	RefSeq	gene	104552	104935	.	+	.	ID=gene8015;Dbxref=GeneID:1095185;Name=SCP1.107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.107
NC_003903.1	RefSeq	CDS	104552	104935	.	+	0	ID=cds7870;Parent=gene8015;Dbxref=Genbank:NP_639680.1,GeneID:1095185;Name=NP_639680.1;Note=unknown%2C len: 127aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639680.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	105193	105196	.	+	.	ID=id10270;gbkey=RBS
NC_003903.1	RefSeq	gene	105204	105809	.	+	.	ID=gene8016;Dbxref=GeneID:1095186;Name=SCP1.108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.108
NC_003903.1	RefSeq	CDS	105204	105809	.	+	0	ID=cds7871;Parent=gene8016;Dbxref=Genbank:NP_639681.1,GeneID:1095186;Name=NP_639681.1;Note=unknown%2C len: 201aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639681.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	105795	105800	.	+	.	ID=id10271;Dbxref=GeneID:1095186;gbkey=RBS
NC_003903.1	RefSeq	gene	105806	105997	.	+	.	ID=gene8017;Dbxref=GeneID:1095187;Name=SCP1.109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.109
NC_003903.1	RefSeq	CDS	105806	105997	.	+	0	ID=cds7872;Parent=gene8017;Dbxref=Genbank:NP_639682.1,GeneID:1095187;Name=NP_639682.1;Note=unknown%2C len: 63aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639682.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	105983	105986	.	+	.	ID=id10272;Dbxref=GeneID:1095187;gbkey=RBS
NC_003903.1	RefSeq	gene	105994	106995	.	+	.	ID=gene8018;Dbxref=GeneID:1095188;Name=SCP1.110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.110
NC_003903.1	RefSeq	CDS	105994	106995	.	+	0	ID=cds7873;Parent=gene8018;Dbxref=Genbank:NP_639683.1,GeneID:1095188;Name=NP_639683.1;Note=possible ATP/GTP-binding protein%2C len: 333aa%3B N-terminal similar to that of TR:O69213 (EMBL:AJ224354) protein serine-threonine phosphatase from Anabaena sp. (strain PCC 7120) (858 aa) fasta scores%3B opt: 334%2C z-score: 391.4%2C E(): 2.5e-14%2C 42.0%25 identity in 150 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639683.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	106069	106092	.	+	.	ID=id10273;Dbxref=GeneID:1095188;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	106981	106985	.	+	.	ID=id10274;Dbxref=GeneID:1095188;gbkey=RBS
NC_003903.1	RefSeq	gene	106992	107186	.	+	.	ID=gene8019;Dbxref=GeneID:1095189;Name=SCP1.111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.111
NC_003903.1	RefSeq	CDS	106992	107186	.	+	0	ID=cds7874;Parent=gene8019;Dbxref=Genbank:NP_639684.1,GeneID:1095189;Name=NP_639684.1;Note=doubtful CDS%2C unknown%2C len: 64aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639684.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	107214	107218	.	+	.	ID=id10275;gbkey=RBS
NC_003903.1	RefSeq	gene	107224	107994	.	+	.	ID=gene8020;Dbxref=GeneID:1095190;Name=SCP1.112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.112
NC_003903.1	RefSeq	CDS	107224	107994	.	+	0	ID=cds7875;Parent=gene8020;Dbxref=Genbank:NP_639685.1,GeneID:1095190;Name=NP_639685.1;Note=unknown%2C len: 256aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639685.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	108067	108070	.	+	.	ID=id10276;gbkey=RBS
NC_003903.1	RefSeq	gene	108078	108845	.	+	.	ID=gene8021;Dbxref=GeneID:1095191;Name=SCP1.113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.113
NC_003903.1	RefSeq	CDS	108078	108845	.	+	0	ID=cds7876;Parent=gene8021;Dbxref=Genbank:NP_639686.1,GeneID:1095191;Name=NP_639686.1;Note=unknown%2C len: 255aa%3B contains a region conserved in other proteins eg. SW:P36892 (YREP_STRAM) hypothetical 19.3 kDa protein in RepSA 5'region (ORF183) from plasmid pSAM2 of Streptomyces ambofaciens%2C possibly involved in control of plasmid replication (183 aa) fasta scores%3B opt: 458%2C z-score: 523.4%2C E(): 1.1e-21%2C 47.7%25 identity in 174 aa overlap. Contains Pfam match to entry PF00990 DUF9%2C Domain of unknown function DUF9.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639686.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	108273	108755	.	+	.	ID=id10277;Dbxref=GeneID:1095191;Note=Pfam match to entry PF00990 DUF9%2C Domain of unknown function DUF9%2C score 132.00%2C E-value 1e-35;gbkey=misc_feature
NC_003903.1	RefSeq	gene	108842	109300	.	+	.	ID=gene8022;Dbxref=GeneID:1095192;Name=SCP1.114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.114
NC_003903.1	RefSeq	CDS	108842	109300	.	+	0	ID=cds7877;Parent=gene8022;Dbxref=Genbank:NP_639687.1,GeneID:1095192;Name=NP_639687.1;Note=unknown%2C len: 152aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639687.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	109285	109288	.	+	.	ID=id10278;Dbxref=GeneID:1095192;gbkey=RBS
NC_003903.1	RefSeq	gene	109297	109824	.	+	.	ID=gene8023;Dbxref=GeneID:1095193;Name=SCP1.115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.115
NC_003903.1	RefSeq	CDS	109297	109824	.	+	0	ID=cds7878;Parent=gene8023;Dbxref=Genbank:NP_639688.1,GeneID:1095193;Name=NP_639688.1;Note=unknown%2C len: 175aa%3B weak similarity with TR:Q9Z6E9 (EMBL:AF073300) WhiB%2C  regulatory protein from Mycobacterium smegmatis (96 aa) fasta scores%3B opt: 118%2C z-score: 151.2%2C E():  0.59%2C 28.9%25 identity in 97 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639688.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	109999	110003	.	+	.	ID=id10279;gbkey=RBS
NC_003903.1	RefSeq	gene	110011	111153	.	+	.	ID=gene8024;Dbxref=GeneID:1095194;Name=SCP1.116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.116
NC_003903.1	RefSeq	CDS	110011	111153	.	+	0	ID=cds7879;Parent=gene8024;Dbxref=Genbank:NP_639689.1,GeneID:1095194;Name=NP_639689.1;Note=possible ECF-family sigma factor%2C len: 380aa%3B region similar to many eg. TR:Q9RIT1 (EMBL:AJ010584) ECF sigma factor from Streptomyces coelicolor (264 aa) fasta scores%3B opt: 485%2C z-score: 519.3%2C E(): 1.9e-21%2C 39.0%25 identity in 223 aa overlap and SW:P35165 (SIGX_BACSU) RNA polymerase sigma factor SigX from Bacillus subtilis (194 aa) fasta scores%3B opt: 215%2C z-score: 237.7%2C E(): 9e-06%2C 29.0%25 identity in 162 aa overlap. Contains Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily). Contains a TTA encoded leucine at residue 31%2C possible target for bldA regulation.;gbkey=CDS;product=ecf family sigma factor;protein_id=NP_639689.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	110101	110103	.	+	.	ID=id10280;Dbxref=GeneID:1095194;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	110233	110403	.	+	.	ID=id10281;Dbxref=GeneID:1095194;Note=Pfam match to entry PF00776 Sigma70_ECF%2C Sigma-70 factor (ECF subfamily)%2C score 34.70%2C E-value 2.1e-06;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	111136	111141	.	+	.	ID=id10282;Dbxref=GeneID:1095194;gbkey=RBS
NC_003903.1	RefSeq	gene	111150	111905	.	+	.	ID=gene8025;Dbxref=GeneID:1095195;Name=SCP1.117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.117
NC_003903.1	RefSeq	CDS	111150	111905	.	+	0	ID=cds7880;Parent=gene8025;Dbxref=Genbank:NP_639690.1,GeneID:1095195;Name=NP_639690.1;Note=unknown%2C len: 251aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639690.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	111585	113744	.	+	.	ID=id10283;Note=Region previously sequenced as EMBL:AF235031 Streptomyces coelicolor A3(2)  DNA-polymerase III%2C beta chain gene%2C complete cds. Note discrepencies.%3B label: AF235031;gbkey=misc_feature
NC_003903.1	RefSeq	gene	112041	112220	.	+	.	ID=gene8026;Dbxref=GeneID:1095196;Name=SCP1.118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.118
NC_003903.1	RefSeq	CDS	112041	112220	.	+	0	ID=cds7881;Parent=gene8026;Dbxref=Genbank:NP_639691.1,GeneID:1095196;Name=NP_639691.1;Note=doubtful CDS%2C unknown%2C len: 59aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639691.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	112296	112301	.	+	.	ID=id10284;gbkey=RBS
NC_003903.1	RefSeq	gene	112312	113430	.	+	.	ID=gene8027;Dbxref=GeneID:1095197;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=SCP1.119
NC_003903.1	RefSeq	CDS	112312	113430	.	+	0	ID=cds7882;Parent=gene8027;Dbxref=Genbank:NP_639692.1,GeneID:1095197;Name=NP_639692.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;gene=dnaN;product=DNA polymerase III subunit beta;protein_id=NP_639692.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	112312	113409	.	+	.	ID=id10285;Dbxref=GeneID:1095197;Note=Pfam match to entry PF00712 DNA_pol3_beta%2C DNA polymerase III beta subunit%2C score 317.80%2C E-value 1.2e-91;gbkey=misc_feature;gene=dnaN
NC_003903.1	RefSeq	ribosome_entry_site	113435	113439	.	+	.	ID=id10286;gbkey=RBS
NC_003903.1	RefSeq	gene	113446	113625	.	+	.	ID=gene8028;Dbxref=GeneID:1095198;Name=SCP1.120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.120
NC_003903.1	RefSeq	CDS	113446	113625	.	+	0	ID=cds7883;Parent=gene8028;Dbxref=Genbank:NP_639693.1,GeneID:1095198;Name=NP_639693.1;Note=unknown%2C len: 59aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639693.1;transl_table=11
NC_003903.1	RefSeq	gene	113740	114735	.	+	.	ID=gene8029;Dbxref=GeneID:1095199;Name=SCP1.121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.121
NC_003903.1	RefSeq	CDS	113740	114735	.	+	0	ID=cds7884;Parent=gene8029;Dbxref=Genbank:NP_639694.1,GeneID:1095199;Name=NP_639694.1;Note=unknown%2C len: 178aa%3B Contains a TTA encoded leucine at residue 76%2C possible target for bldA regulation.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639694.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	113965	113967	.	+	.	ID=id10287;Dbxref=GeneID:1095199;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	114785	114789	.	+	.	ID=id10288;gbkey=RBS
NC_003903.1	RefSeq	gene	114800	115540	.	+	.	ID=gene8030;Dbxref=GeneID:1095200;Name=SCP1.122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.122
NC_003903.1	RefSeq	CDS	114800	115540	.	+	0	ID=cds7885;Parent=gene8030;Dbxref=Genbank:NP_639695.1,GeneID:1095200;Name=NP_639695.1;Note=unknown%2C len: 246aa%3B regions similar to other proteins of undefined function eg. SW:P71690 (YE21_MYCTU) hypothetical protein from Mycobacterium tuberculosis (301 aa) fasta scores%3B opt: 194%2C z-score: 231.0%2C E(): 2.1e-05%2C 36.4%25 identity in 132 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639695.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	115617	115620	.	+	.	ID=id10289;gbkey=RBS
NC_003903.1	RefSeq	gene	115634	115759	.	+	.	ID=gene8031;Dbxref=GeneID:1095201;Name=SCP1.123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.123
NC_003903.1	RefSeq	CDS	115634	115759	.	+	0	ID=cds7886;Parent=gene8031;Dbxref=Genbank:NP_639696.1,GeneID:1095201;Name=NP_639696.1;Note=doubtful CDS%2C unknown%2C len: 41aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639696.1;transl_table=11
NC_003903.1	RefSeq	gene	115803	116042	.	-	.	ID=gene8032;Dbxref=GeneID:1095202;Name=SCP1.124c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.124c
NC_003903.1	RefSeq	CDS	115803	116042	.	-	0	ID=cds7887;Parent=gene8032;Dbxref=Genbank:NP_639697.1,GeneID:1095202;Name=NP_639697.1;Note=unknown%2C len: 79aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639697.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	116048	116055	.	-	.	ID=id10290;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	116450	116456	.	+	.	ID=id10291;gbkey=RBS
NC_003903.1	RefSeq	gene	116467	118641	.	+	.	ID=gene8033;Dbxref=GeneID:1095203;Name=SCP1.125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.125
NC_003903.1	RefSeq	CDS	116467	118641	.	+	0	ID=cds7888;Parent=gene8033;Dbxref=Genbank:NP_639698.1,GeneID:1095203;Name=NP_639698.1;Note=unknown%2C len: 724aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639698.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	118644	118647	.	+	.	ID=id10292;gbkey=RBS
NC_003903.1	RefSeq	gene	118650	118886	.	+	.	ID=gene8034;Dbxref=GeneID:1095204;Name=SCP1.126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.126
NC_003903.1	RefSeq	CDS	118650	118886	.	+	0	ID=cds7889;Parent=gene8034;Dbxref=Genbank:NP_639699.1,GeneID:1095204;Name=NP_639699.1;Note=unknown%2C len: 78aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639699.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	118870	118874	.	+	.	ID=id10293;Dbxref=GeneID:1095204;gbkey=RBS
NC_003903.1	RefSeq	gene	118883	119662	.	+	.	ID=gene8035;Dbxref=GeneID:1095205;Name=SCP1.127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.127
NC_003903.1	RefSeq	CDS	118883	119662	.	+	0	ID=cds7890;Parent=gene8035;Dbxref=Genbank:NP_639700.1,GeneID:1095205;Name=NP_639700.1;Note=unknown%2C len: 259aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639700.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	120060	120064	.	+	.	ID=id10294;gbkey=RBS
NC_003903.1	RefSeq	gene	120071	120868	.	+	.	ID=gene8036;Dbxref=GeneID:1095206;Name=SCP1.128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.128
NC_003903.1	RefSeq	CDS	120071	120868	.	+	0	ID=cds7891;Parent=gene8036;Dbxref=Genbank:NP_639701.1,GeneID:1095206;Name=NP_639701.1;Note=unknown%2C len: 265aa%3B Contains a TTA encoded leucine at residue 43%2C possible target for bldA regulation.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639701.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	120197	120199	.	+	.	ID=id10295;Dbxref=GeneID:1095206;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	120856	120860	.	+	.	ID=id10296;Dbxref=GeneID:1095206;gbkey=RBS
NC_003903.1	RefSeq	gene	120868	121305	.	+	.	ID=gene8037;Dbxref=GeneID:1095207;Name=SCP1.129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.129
NC_003903.1	RefSeq	CDS	120868	121305	.	+	0	ID=cds7892;Parent=gene8037;Dbxref=Genbank:NP_639702.1,GeneID:1095207;Name=NP_639702.1;Note=unknown%2C len: 145aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639702.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	121284	121287	.	+	.	ID=id10297;Dbxref=GeneID:1095207;gbkey=RBS
NC_003903.1	RefSeq	gene	121302	121631	.	+	.	ID=gene8038;Dbxref=GeneID:1095208;Name=SCP1.130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.130
NC_003903.1	RefSeq	CDS	121302	121631	.	+	0	ID=cds7893;Parent=gene8038;Dbxref=Genbank:NP_639703.1,GeneID:1095208;Name=NP_639703.1;Note=unknown%2C len: 109aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639703.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	121857	121860	.	+	.	ID=id10298;gbkey=RBS
NC_003903.1	RefSeq	gene	121863	122663	.	+	.	ID=gene8039;Dbxref=GeneID:1095209;Name=SCP1.131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.131
NC_003903.1	RefSeq	CDS	121863	122663	.	+	0	ID=cds7894;Parent=gene8039;Dbxref=Genbank:NP_639704.1,GeneID:1095209;Name=NP_639704.1;Note=unknown%2C len: 266aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639704.1;transl_table=11
NC_003903.1	RefSeq	gene	122807	123343	.	-	.	ID=gene8040;Dbxref=GeneID:1095210;Name=SCP1.132c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.132c
NC_003903.1	RefSeq	CDS	122807	123343	.	-	0	ID=cds7895;Parent=gene8040;Dbxref=Genbank:NP_639705.1,GeneID:1095210;Name=NP_639705.1;Note=unknown%2C len: 178aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639705.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	123349	123354	.	-	.	ID=id10299;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	123663	123668	.	+	.	ID=id10300;gbkey=RBS
NC_003903.1	RefSeq	gene	123685	123936	.	+	.	ID=gene8041;Dbxref=GeneID:1095211;Name=SCP1.133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.133
NC_003903.1	RefSeq	CDS	123685	123936	.	+	0	ID=cds7896;Parent=gene8041;Dbxref=Genbank:NP_639706.1,GeneID:1095211;Name=NP_639706.1;Note=doubtful CDS%2C unknown%2C len: 83aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639706.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	123908	123914	.	+	.	ID=id10301;Dbxref=GeneID:1095211;gbkey=RBS
NC_003903.1	RefSeq	gene	123923	124249	.	+	.	ID=gene8042;Dbxref=GeneID:1095212;Name=SCP1.134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.134
NC_003903.1	RefSeq	CDS	123923	124249	.	+	0	ID=cds7897;Parent=gene8042;Dbxref=Genbank:NP_639707.1,GeneID:1095212;Name=NP_639707.1;Note=unknown%2C len: 108aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639707.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	124236	124241	.	+	.	ID=id10302;Dbxref=GeneID:1095212;gbkey=RBS
NC_003903.1	RefSeq	gene	124246	125187	.	+	.	ID=gene8043;Dbxref=GeneID:1095213;Name=SCP1.135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.135
NC_003903.1	RefSeq	CDS	124246	125187	.	+	0	ID=cds7898;Parent=gene8043;Dbxref=Genbank:NP_639708.1,GeneID:1095213;Name=NP_639708.1;Note=unknown%2C len: 313aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639708.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	125252	125255	.	+	.	ID=id10303;gbkey=RBS
NC_003903.1	RefSeq	gene	125272	127911	.	+	.	ID=gene8044;Dbxref=GeneID:1095214;Name=SCP1.136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.136
NC_003903.1	RefSeq	CDS	125272	127911	.	+	0	ID=cds7899;Parent=gene8044;Dbxref=Genbank:NP_639709.1,GeneID:1095214;Name=NP_639709.1;Note=possible helicase%2C len: 879aa%3B similar to other large proteins eg. TR:Q9L8V8 (EMBL:AF194023) helicase-like protein (881 aa) fasta scores%3B opt: 377%2C z-score: 397.0%2C E(): 1.2e-14%2C 37.2%25 identity in 916 aa overlap. Contains Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain. Note that this protein is inverted and repeated at complement(215655..217487) CDS SCP1.216Ac fasta scores%3B opt: 3788%2C z-score: 3530.0%2C E(): 0%2C 93.0%25 identity in 599 aa overlap. SCP1.216Ac is truncated at the N-terminus suggesting that either SCP1.216Ac is deleted or SCP1.136 has an incorrectly designated translational start site.%3B label: helicase?;gbkey=CDS;product=helicase;protein_id=NP_639709.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	126134	128146	.	+	.	ID=id10304;Note=Inverted and repeated at 215434..217438;gbkey=repeat_region
NC_003903.1	RefSeq	sequence_feature	126376	126636	.	+	.	ID=id10305;Dbxref=GeneID:1095214;Note=Pfam match to entry PF00271 helicase_C%2C Helicases conserved C-terminal domain%2C score 15.70%2C E-value 0.0041;gbkey=misc_feature
NC_003903.1	RefSeq	gene	128413	128709	.	-	.	ID=gene8045;Dbxref=GeneID:1095215;Name=SCP1.137c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.137c
NC_003903.1	RefSeq	CDS	128413	128709	.	-	0	ID=cds7900;Parent=gene8045;Dbxref=Genbank:NP_639710.1,GeneID:1095215;Name=NP_639710.1;Note=doubtful CDS%2C unknown%2C len: 98aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639710.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	128527	128589	.	+	.	ID=id10306;Note=Directly repeated at 219632..219694. Both copies are close to possible plasmid partition genes - relevance unknown.;gbkey=repeat_region
NC_003903.1	RefSeq	ribosome_entry_site	128818	128822	.	+	.	ID=id10307;gbkey=RBS
NC_003903.1	RefSeq	gene	128828	130090	.	+	.	ID=gene8046;Dbxref=GeneID:1095216;Name=parA1;gbkey=Gene;gene=parA1;gene_biotype=protein_coding;locus_tag=SCP1.138
NC_003903.1	RefSeq	CDS	128828	130090	.	+	0	ID=cds7901;Parent=gene8046;Dbxref=Genbank:NP_639711.1,GeneID:1095216;Name=NP_639711.1;Note=parA1%2C possible plasmid partitioning protein%2C len: 420aa%3B similar to many eg. TR:Q9RFM1 (EMBL:AF187159) ParA partitioning protein from Streptomyces coelicolor (357 aa) fasta scores%3B opt: 185%2C z-score: 214.7%2C E(): 0.00017%2C 29.0%25 identity in 314 aa overlap. Contains Pfam match to entry PF00991 ParA%2C ParA family ATPase. This CDS is directly duplicated at 221485..222648 (ParA2%2C SCP1.221) fasta scores%3B opt: 980%2C z-score: 1089.9%2C E(): 0%2C 55.2%25 identity in 424 aa overlap.;gbkey=CDS;gene=parA1;product=plasmid partitioning protein%2C para1;protein_id=NP_639711.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	128840	130040	.	+	.	ID=id10308;Dbxref=GeneID:1095216;Note=Direct%2C degenerate%2C frameshifted%2C repeated at 221504..222592;gbkey=repeat_region;gene=parA1
NC_003903.1	RefSeq	sequence_feature	129566	129922	.	+	.	ID=id10309;Dbxref=GeneID:1095216;Note=Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 36.00%2C E-value 8.9e-07;gbkey=misc_feature;gene=parA1
NC_003903.1	RefSeq	ribosome_entry_site	130076	130083	.	+	.	ID=id10310;Dbxref=GeneID:1095216;gbkey=RBS;gene=parA1
NC_003903.1	RefSeq	gene	130087	131214	.	+	.	ID=gene8047;Dbxref=GeneID:1095217;Name=parB1;gbkey=Gene;gene=parB1;gene_biotype=protein_coding;locus_tag=SCP1.139
NC_003903.1	RefSeq	CDS	130087	131214	.	+	0	ID=cds7902;Parent=gene8047;Dbxref=Genbank:NP_639712.1,GeneID:1095217;Name=NP_639712.1;Note=parB1%2C plasmid probable partitioning protein%2C len: 375aa%3B weakly similar to many ParB-like proteins eg. TR:Q9RFM2 (EMBL:AF187159) ParB partitioning protein from Streptomyces coelicolor (368 aa) fasta scores%3B opt: 176%2C z-score: 188.6%2C E(): 0.0049%2C 32.3%25 identity in 192 aa overlap. Contains Pfam match to entry PF02195 ParBc%2C ParB-like nuclease domain. This CDS is directly duplicated at 130087..131214 (ParB2%2C SCP1.222) fasta scores%3B opt: 566%2C z-score: 524.0 E(): 1.2e-24%2C 33.6%25 identity in 384 aa overlap.;gbkey=CDS;gene=parB1;product=plasmid partitioning protein%2C parb1;protein_id=NP_639712.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	130207	130527	.	+	.	ID=id10311;Dbxref=GeneID:1095217;Note=Pfam match to entry PF02195 ParBc%2C ParB-like nuclease domain%2C score 47.00%2C E-value 4.3e-10;gbkey=misc_feature;gene=parB1
NC_003903.1	RefSeq	ribosome_entry_site	131460	131466	.	+	.	ID=id10312;gbkey=RBS
NC_003903.1	RefSeq	gene	131476	133197	.	+	.	ID=gene8048;Dbxref=GeneID:1095218;Name=SCP1.140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.140
NC_003903.1	RefSeq	CDS	131476	133197	.	+	0	ID=cds7903;Parent=gene8048;Dbxref=Genbank:NP_639713.1,GeneID:1095218;Name=NP_639713.1;Note=possible membrane protein%2C len: 573aa%3B N-terminal half contains possible membrane-spanning hydrophobic regions and is strongly similar to the N-terminal region of of TR:Q9X894 (EMBL:AL049707)  integral membrane protein from Streptomyces coelicolor (433 aa) fasta scores%3B opt: 1482%2C z-score: 1388.5%2C E(): 0%2C 62.4%25 identity in 420 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639713.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	133864	133869	.	+	.	ID=id10313;gbkey=RBS
NC_003903.1	RefSeq	gene	133878	134771	.	+	.	ID=gene8049;Dbxref=GeneID:1095219;Name=SCP1.141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.141
NC_003903.1	RefSeq	CDS	133878	134771	.	+	0	ID=cds7904;Parent=gene8049;Dbxref=Genbank:NP_639714.1,GeneID:1095219;Name=NP_639714.1;Note=unknown%2C len: 297aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639714.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	134799	134804	.	+	.	ID=id10314;gbkey=RBS
NC_003903.1	RefSeq	gene	134811	135074	.	+	.	ID=gene8050;Dbxref=GeneID:1095220;Name=SCP1.142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.142
NC_003903.1	RefSeq	CDS	134811	135074	.	+	0	ID=cds7905;Parent=gene8050;Dbxref=Genbank:NP_639715.1,GeneID:1095220;Name=NP_639715.1;Note=unknown%2C len: 87aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639715.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	135059	135063	.	+	.	ID=id10315;Dbxref=GeneID:1095220;gbkey=RBS
NC_003903.1	RefSeq	gene	135071	136180	.	+	.	ID=gene8051;Dbxref=GeneID:1095221;Name=SCP1.143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.143
NC_003903.1	RefSeq	CDS	135071	136180	.	+	0	ID=cds7906;Parent=gene8051;Dbxref=Genbank:NP_639716.1,GeneID:1095221;Name=NP_639716.1;Note=possible membrane protein%2C len: 369aa%3B contains one possible membrane-spanning hydrophobic region.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639716.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	136172	136177	.	+	.	ID=id10316;Dbxref=GeneID:1095221;gbkey=RBS
NC_003903.1	RefSeq	gene	136187	136474	.	+	.	ID=gene8052;Dbxref=GeneID:1095222;Name=SCP1.144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.144
NC_003903.1	RefSeq	CDS	136187	136474	.	+	0	ID=cds7907;Parent=gene8052;Dbxref=Genbank:NP_639717.1,GeneID:1095222;Name=NP_639717.1;Note=possible membrane protein%2C len: 95aa%3B contains two possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639717.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	136461	136466	.	+	.	ID=id10317;Dbxref=GeneID:1095222;gbkey=RBS
NC_003903.1	RefSeq	gene	136471	137070	.	+	.	ID=gene8053;Dbxref=GeneID:1095223;Name=SCP1.145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.145
NC_003903.1	RefSeq	CDS	136471	137070	.	+	0	ID=cds7908;Parent=gene8053;Dbxref=Genbank:NP_639718.1,GeneID:1095223;Name=NP_639718.1;Note=possible membrane protein%2C len: 199aa%3B contains two possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639718.1;transl_table=11
NC_003903.1	RefSeq	gene	137070	139616	.	+	.	ID=gene8054;Dbxref=GeneID:1095224;Name=SCP1.146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.146
NC_003903.1	RefSeq	CDS	137070	139616	.	+	0	ID=cds7909;Parent=gene8054;Dbxref=Genbank:NP_639719.1,GeneID:1095224;Name=NP_639719.1;Note=possible ATP/GTP-binding protein%2C len: 848aa%3B weak but full length similarity with TR:Q9L4H0 (EMBL:AJ243106) conjugative protein from integrative element ICESt1 of Streptococcus thermophilus (834 aa) fasta scores%3B opt: 190%2C z-score: 212.3%2C E(): 0.00023%2C 18.6%25 identity in 870 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639719.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	138474	138497	.	+	.	ID=id10318;Dbxref=GeneID:1095224;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	gene	139613	141931	.	+	.	ID=gene8055;Dbxref=GeneID:1095225;Name=SCP1.147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.147
NC_003903.1	RefSeq	CDS	139613	141931	.	+	0	ID=cds7910;Parent=gene8055;Dbxref=Genbank:NP_639720.1,GeneID:1095225;Name=NP_639720.1;Note=possible integral membrane protein%2C len: 772aa%3B contains multiple possible membrane-spanning hydrophobic regions. Note possible alternative downstream translational start sites. Proline-rich C-terminal region.;gbkey=CDS;product=integral membrane protein;protein_id=NP_639720.1;transl_table=11
NC_003903.1	RefSeq	gene	141924	143078	.	+	.	ID=gene8056;Dbxref=GeneID:1095226;Name=SCP1.148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.148
NC_003903.1	RefSeq	CDS	141924	143078	.	+	0	ID=cds7911;Parent=gene8056;Dbxref=Genbank:NP_639721.1,GeneID:1095226;Name=NP_639721.1;Note=possible secreted protein%2C len: 384aa%3B similar to many especially TR:Q9L1N1 (EMBL:AL138977)  secreted protein from Streptomyces coelicolor (377 aa) fasta scores%3B opt: 1234%2C z-score: 1291.1%2C E(): 0%2C 52.2%25 identity in 385 aa overlap. Contains a possible cleavable N-terminal signal sequence. Also contains Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family.;gbkey=CDS;product=secreted protein;protein_id=NP_639721.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	142716	143072	.	+	.	ID=id10319;Dbxref=GeneID:1095226;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 81.40%2C E-value 1.9e-20;gbkey=misc_feature
NC_003903.1	RefSeq	gene	143167	144276	.	-	.	ID=gene8057;Dbxref=GeneID:1095227;Name=SCP1.149c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.149c
NC_003903.1	RefSeq	CDS	143167	144276	.	-	0	ID=cds7912;Parent=gene8057;Dbxref=Genbank:NP_639722.1,GeneID:1095227;Name=NP_639722.1;Note=unknown%2C len: 369aa%3B similar to SCP1.181c (pseudogene) fasta scores%3B opt: 331%2C z-score: 405.0%2C E(): 4.9e-18%2C 44.2%25 identity in 120 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639722.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	144283	144287	.	-	.	ID=id10320;gbkey=RBS
NC_003903.1	RefSeq	gene	144552	145661	.	-	.	ID=gene8058;Dbxref=GeneID:1095228;Name=SCP1.150c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.150c
NC_003903.1	RefSeq	CDS	144552	145661	.	-	0	ID=cds7913;Parent=gene8058;Dbxref=Genbank:NP_639723.1,GeneID:1095228;Name=NP_639723.1;Note=unknown%2C len: 369aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639723.1;transl_table=11
NC_003903.1	RefSeq	gene	145658	146182	.	-	.	ID=gene8059;Dbxref=GeneID:1095229;Name=SCP1.151c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.151c
NC_003903.1	RefSeq	CDS	145658	146182	.	-	0	ID=cds7914;Parent=gene8059;Dbxref=Genbank:NP_639724.1,GeneID:1095229;Name=NP_639724.1;Note=possible sigma factor%2C len: 174aa%3B weakly similar to many eg. TR:Q9X8Z1 (EMBL:AL078610)  ECF sigma factor from Streptomyces coelicolor (184 aa) fasta scores%3B .opt: 187%2C z-score: 235.0%2C E(): 1.3e-05%2C 28.0%25 identity in 164 aa overlap and TR:O05767 (EMBL:U87307) SigE%2C extracytoplasmic function alternative sigma factor from Mycobacterium smegmatis (204 aa) fasta scores%3B opt: 160%2C z-score: 202.2%2C E(): 0.00085%2C 27.8%25 identity in 187 aa overlap.;gbkey=CDS;product=sigma factor;protein_id=NP_639724.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	145669	145674	.	-	.	ID=id10321;Dbxref=GeneID:1095229;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	146184	146190	.	-	.	ID=id10322;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	146385	146390	.	+	.	ID=id10323;gbkey=RBS
NC_003903.1	RefSeq	gene	146399	146851	.	+	.	ID=gene8060;Dbxref=GeneID:1095230;Name=SCP1.152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.152
NC_003903.1	RefSeq	CDS	146399	146851	.	+	0	ID=cds7915;Parent=gene8060;Dbxref=Genbank:NP_639725.1,GeneID:1095230;Name=NP_639725.1;Note=unknown%2C len: 150aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639725.1;transl_table=11
NC_003903.1	RefSeq	gene	147330	147803	.	+	.	ID=gene8061;Dbxref=GeneID:1095231;Name=SCP1.153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.153
NC_003903.1	RefSeq	CDS	147330	147803	.	+	0	ID=cds7916;Parent=gene8061;Dbxref=Genbank:NP_639726.1,GeneID:1095231;Name=NP_639726.1;Note=possible secreted protein%2C len: 157aa%3B contains a possible N-terminal signal sequence.;gbkey=CDS;product=secreted protein;protein_id=NP_639726.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	147790	147793	.	+	.	ID=id10324;Dbxref=GeneID:1095231;gbkey=RBS
NC_003903.1	RefSeq	gene	147800	149980	.	+	.	ID=gene8062;Dbxref=GeneID:1095232;Name=SCP1.154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.154
NC_003903.1	RefSeq	CDS	147800	149980	.	+	0	ID=cds7917;Parent=gene8062;Dbxref=Genbank:NP_639727.1,GeneID:1095232;Name=NP_639727.1;Note=possible ATP/GTP-binding protein%2C len: 726aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639727.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	148688	148711	.	+	.	ID=id10325;Dbxref=GeneID:1095232;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	149982	149987	.	+	.	ID=id10326;gbkey=RBS
NC_003903.1	RefSeq	gene	149995	150951	.	+	.	ID=gene8063;Dbxref=GeneID:1095233;Name=SCP1.155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.155
NC_003903.1	RefSeq	CDS	149995	150951	.	+	0	ID=cds7918;Parent=gene8063;Dbxref=Genbank:NP_639728.1,GeneID:1095233;Name=NP_639728.1;Note=unknown%2C len: 318aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639728.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	150934	150939	.	+	.	ID=id10327;Dbxref=GeneID:1095233;gbkey=RBS
NC_003903.1	RefSeq	gene	150948	151241	.	+	.	ID=gene8064;Dbxref=GeneID:1095234;Name=SCP1.156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.156
NC_003903.1	RefSeq	CDS	150948	151241	.	+	0	ID=cds7919;Parent=gene8064;Dbxref=Genbank:NP_639729.1,GeneID:1095234;Name=NP_639729.1;Note=unknown%2C len: 97aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639729.1;transl_table=11
NC_003903.1	RefSeq	gene	151267	151653	.	+	.	ID=gene8065;Dbxref=GeneID:1095235;Name=SCP1.157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.157
NC_003903.1	RefSeq	CDS	151267	151653	.	+	0	ID=cds7920;Parent=gene8065;Dbxref=Genbank:NP_639730.1,GeneID:1095235;Name=NP_639730.1;Note=unknown%2C len: 128aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639730.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	152363	152367	.	+	.	ID=id10328;gbkey=RBS
NC_003903.1	RefSeq	gene	152373	153824	.	+	.	ID=gene8066;Dbxref=GeneID:1095236;Name=SCP1.158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.158
NC_003903.1	RefSeq	CDS	152373	153824	.	+	0	ID=cds7921;Parent=gene8066;Dbxref=Genbank:NP_639731.1,GeneID:1095236;Name=NP_639731.1;Note=unknown%2C len: 483aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639731.1;transl_table=11
NC_003903.1	RefSeq	gene	153834	154043	.	-	.	ID=gene8067;Dbxref=GeneID:1095237;Name=SCP1.159c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.159c
NC_003903.1	RefSeq	CDS	153834	154043	.	-	0	ID=cds7922;Parent=gene8067;Dbxref=Genbank:NP_639732.1,GeneID:1095237;Name=NP_639732.1;Note=possible oxidoreductase subunit%2C len: 90aa%3B similar to the extreme C-terminus of many glycerol-3-phosphate dehydrogenases eg. SW:P37606 (GPDA_ECOLI) glycerol-3-phosphate dehydrogenase from Escherichia coli (339 aa) fasta scores%3B opt: 176%2C z-score: 239.8 E(): 6.9e-06%2C 39.5%25 identity in 76 aa overlap and TR:Q9ZBS0 (EMBL:AL034447) glycerol-3-phosphate dehydrogenase from Streptomyces coelicolor (336 aa) fasta scores%3B opt: 252%2C z-score: 338.2%2C E(): 2.3e-11%2C 53.1%25 identity in 81 aa overlap. Also similar to neighbouring CDS SCP1.162c fasta scores%3B opt: 238%2C z-score: 294.0%2C E(): 7.6e-12%2C 50.7%25 identity in 75 aa overlap.;gbkey=CDS;product=oxidoreductase subunit;protein_id=NP_639732.1;transl_table=11
NC_003903.1	RefSeq	gene	154161	155738	.	-	.	ID=gene8068;Dbxref=GeneID:1095238;Name=SCP1.160c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.160c
NC_003903.1	RefSeq	CDS	154161	155738	.	-	0	ID=cds7923;Parent=gene8068;Dbxref=Genbank:NP_639733.1,GeneID:1095238;Name=NP_639733.1;Note=possible oxidoreductase%2C len: 525aa%3B similar to many eg. TR:Q9RDL3 (EMBL:AL136518)  oxidoreductase from Streptomyces coelicolor (524 aa) fasta scores%3B opt: 308%2C1 z-score: 3329.1%2C E(): 0%2C 88.9%25 identity in 523 aa overlap and SW:P56913 (NUF2_RHIME) NADH dehydrogenase I chain F 2 (EC 1.6.5.3) from Rhizobium meliloti (Sinorhizobium meliloti) (421 aa) fasta scores%3B opt: 367%2C z-score: 400.3%2C E(): 7.9e-15%2C 28.4%25 identity in 395 aa overlap.;gbkey=CDS;product=oxidoreductase;protein_id=NP_639733.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	155752	155756	.	-	.	ID=id10329;gbkey=RBS
NC_003903.1	RefSeq	gene	156182	156988	.	-	.	ID=gene8069;Dbxref=GeneID:1095239;Name=SCP1.161c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.161c
NC_003903.1	RefSeq	CDS	156182	156988	.	-	0	ID=cds7924;Parent=gene8069;Dbxref=Genbank:NP_639734.1,GeneID:1095239;Name=NP_639734.1;Note=possible regulatory protein%2C len: 268aa%3B regions similar to many regulatory proteins eg. N-terminus similar to TR:Q9S2B9 (EMBL:AL079353)  regulatory protein from Streptomyces coelicolor (112 aa) blastp scores%3B Identities %3D 50/89 (56%25)%2C Positives %3D 60/89 (67%25) and C-terminal region similar to SW:P38133 (RPOE_STRCO) SigE%2C RNA polymerase sigma-E factor from Streptomyces coelicolor (176 aa) blastp scores%3B Identities %3D 36/131 (27%25)%2C Positives %3D 62/131 (47%25). Contains TTA encoded leucine at residue 70%2C possible target for bldA regulation.;gbkey=CDS;product=regulatory protein;protein_id=NP_639734.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	156779	156781	.	-	.	ID=id10330;Dbxref=GeneID:1095239;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	156995	157000	.	-	.	ID=id10331;gbkey=RBS
NC_003903.1	RefSeq	gene	157452	157649	.	-	.	ID=gene8070;Dbxref=GeneID:1095240;Name=SCP1.162c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.162c
NC_003903.1	RefSeq	CDS	157452	157649	.	-	0	ID=cds7925;Parent=gene8070;Dbxref=Genbank:NP_639735.1,GeneID:1095240;Name=NP_639735.1;Note=possible oxidoreductase subunit%2C len: 65aa%3B similar to the extreme C-terminus of many glycerol-3-phosphate dehydrogenases eg. TR:Q9ZBS0 (EMBL:AL034447) glycerol-3-phosphate dehydrogenase from Streptomyces coelicolor (336 aa) fasta scores%3B opt: 302%2C z-score: 432.6%2C E(): 1.3e-16%2C 76.9%25 identity in 65 aa overlap. Also similar to neighbouring CDS SCP1.162c fasta scores%3B opt: 238%2C z-score: 294.0%2C E(): 7.6e-12%2C 50.7%25 identity in 75 aa overlap.;gbkey=CDS;product=oxidoreductase subunit;protein_id=NP_639735.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	157651	157654	.	-	.	ID=id10332;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	157986	157991	.	+	.	ID=id10333;gbkey=RBS
NC_003903.1	RefSeq	gene	157992	159116	.	+	.	ID=gene8071;Dbxref=GeneID:1095241;Name=SCP1.163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.163
NC_003903.1	RefSeq	CDS	157992	159116	.	+	0	ID=cds7926;Parent=gene8071;Dbxref=Genbank:NP_639736.1,GeneID:1095241;Name=NP_639736.1;Note=probable transposase%2C len: 374aa%3B similar to many eg. TR:Q9KXL3 (EMBL:AL357524)  transposase from Streptomyces coelicolor (281 aa) fasta scores%3B opt: 1663%2C z-score: 1992.2%2C E(): 0%2C 85.4%25 identity in 280 aa overlap and TR:Q44454 (EMBL:Z18270) transposase from IS870 of Agrobacterium tumefaciens (366 aa) fasta scores%3B opt: 248%2C z-score: 300.2%2C E(): 3e-09%2C 24.1%25 identity in 340 aa overlap. Contains Pfam match to entry PF00665 rve%2C Integrase core domain. Contains a TTA encoded leucine at residue 139%2C possible target for bldA regulation. Overlaps region covered by an inverted repeat (158060..158081 and 159583..159604).;gbkey=CDS;product=transposase;protein_id=NP_639736.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	158060	158081	.	+	.	ID=id10334;Dbxref=GeneID:1095241;Note=Inverted and repeated at 159583..159604 - may be related to function of CDS SCP1.163%2C probable transposase.;gbkey=repeat_region
NC_003903.1	RefSeq	repeat_region	158169	159038	.	+	.	ID=id10335;Dbxref=GeneID:1095241;Note=Inverted and repeated at 220554..221364%2C frameshifted.;gbkey=repeat_region
NC_003903.1	RefSeq	sequence_feature	158406	158408	.	+	.	ID=id10336;Dbxref=GeneID:1095241;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	158514	158903	.	+	.	ID=id10337;Dbxref=GeneID:1095241;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 17.20%2C E-value 0.0008;gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	159583	159604	.	+	.	ID=id10338;Note=Inverted and repeated at 158060..158081 - may be related to function of CDS SCP1.163%2C probable transposase.;gbkey=repeat_region
NC_003903.1	RefSeq	gene	159899	160291	.	-	.	ID=gene8072;Dbxref=GeneID:1095242;Name=SCP1.164c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.164c
NC_003903.1	RefSeq	CDS	159899	160291	.	-	0	ID=cds7927;Parent=gene8072;Dbxref=Genbank:NP_639737.1,GeneID:1095242;Name=NP_639737.1;Note=unknown%2C len: 130aa%3B similar to TR:O68053 (EMBL:AF010496) hypothetical protein from Rhodobacter capsulatus (139 aa) fasta scores%3B opt: 223%2C z-score: 291.8%2C E(): 8.7e-09%2C 38.9%25 identity in 126 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639737.1;transl_table=11
NC_003903.1	RefSeq	gene	160942	161544	.	+	.	ID=gene8073;Dbxref=GeneID:1095243;Name=SCP1.165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.165
NC_003903.1	RefSeq	CDS	160942	161544	.	+	0	ID=cds7928;Parent=gene8073;Dbxref=Genbank:NP_639738.1,GeneID:1095243;Name=NP_639738.1;Note=possible secreted protein/lipoprotein%2C len: 200aa%3B contains a possible cleavable N-terminal signal sequence and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=CDS;product=secreted protein/lipoprotein;protein_id=NP_639738.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	161011	161043	.	+	.	ID=id10339;Dbxref=GeneID:1095243;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site;gbkey=misc_feature
NC_003903.1	RefSeq	gene	161538	162440	.	+	.	ID=gene8074;Dbxref=GeneID:1095244;Name=SCP1.166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.166
NC_003903.1	RefSeq	CDS	161538	162440	.	+	0	ID=cds7929;Parent=gene8074;Dbxref=Genbank:NP_639739.1,GeneID:1095244;Name=NP_639739.1;Note=possible ATP/GTP-binding protein%2C len: 300aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639739.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	161712	161735	.	+	.	ID=id10340;Dbxref=GeneID:1095244;Note=PS00017 ATP/GTP-binding site motif A (P-loop)%2C [AG].{4}GK[ST]%2C info count %3D 13.8;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	162452	167780	.	+	.	ID=id10341;Note=Similar to a region from Streptomyces coelicolor cosmid D35 (EMBL:AL160312).%3B label: D35;gbkey=misc_feature
NC_003903.1	RefSeq	gene	162487	163170	.	+	.	ID=gene8075;Dbxref=GeneID:1095245;Name=SCP1.167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.167
NC_003903.1	RefSeq	CDS	162487	163170	.	+	0	ID=cds7930;Parent=gene8075;Dbxref=Genbank:NP_639740.1,GeneID:1095245;Name=NP_639740.1;Note=possible membrane protein%2C len: 227aa%3B weakly similar to TR:Q9L0S0 (EMBL:AL160312) hypothetical protein from Streptomyces coelicolor (239 aa) fasta scores%3B opt: 202%2C z-score: 221.4%2C E(): 7.3e-05%2C 27.2%25 identity in 235 aa overlap. Note possible alternative downstream start codons.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639740.1;transl_table=11
NC_003903.1	RefSeq	gene	163174	164052	.	+	.	ID=gene8076;Dbxref=GeneID:1095246;Name=SCP1.168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.168
NC_003903.1	RefSeq	CDS	163174	164052	.	+	0	ID=cds7931;Parent=gene8076;Dbxref=Genbank:NP_639741.1,GeneID:1095246;Name=NP_639741.1;Note=unknown%2C len: 292aa%3B similar to TR:Q9L0R9 (EMBL:AL160312) hypothetical protein from Streptomyces coelicolor (293 aa) fasta scores%3B opt: 262%2C z-score: 304.0%2C E(): 1.8e-09%2C 30.3%25 identity in 300 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639741.1;transl_table=11
NC_003903.1	RefSeq	gene	164045	165658	.	+	.	ID=gene8077;Dbxref=GeneID:1095247;Name=SCP1.169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.169
NC_003903.1	RefSeq	CDS	164045	165658	.	+	0	ID=cds7932;Parent=gene8077;Dbxref=Genbank:NP_639742.1,GeneID:1095247;Name=NP_639742.1;Note=possible ATP/GTP-binding protein%2C len: 537aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639742.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	164894	164917	.	+	.	ID=id10342;Dbxref=GeneID:1095247;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	165692	165697	.	+	.	ID=id10343;gbkey=RBS
NC_003903.1	RefSeq	gene	165702	166694	.	+	.	ID=gene8078;Dbxref=GeneID:1095248;Name=SCP1.170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.170
NC_003903.1	RefSeq	CDS	165702	166694	.	+	0	ID=cds7933;Parent=gene8078;Dbxref=Genbank:NP_639743.1,GeneID:1095248;Name=NP_639743.1;Note=possible integral membrane protein%2C len: 330aa%3B similar to TR:Q9L0R7 (EMBL:AL160312)  integral membrane protein from Streptomyces coelicolor (345 aa) fasta scores%3B opt: 385%2C z-score: 452.0%2C E(): 1e-17%2C 29.8%25 identity in 292 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=integral membrane protein;protein_id=NP_639743.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	166677	166683	.	+	.	ID=id10344;Dbxref=GeneID:1095248;gbkey=RBS
NC_003903.1	RefSeq	gene	166691	167584	.	+	.	ID=gene8079;Dbxref=GeneID:1095249;Name=SCP1.171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.171
NC_003903.1	RefSeq	CDS	166691	167584	.	+	0	ID=cds7934;Parent=gene8079;Dbxref=Genbank:NP_639745.1,GeneID:1095249;Name=NP_639745.1;Note=possible integral membrane protein%2C len: 297aa%3B similar to TR:Q9L0R6 (EMBL:AL160312)  integral membrane protein from Streptomyces coelicolor (302 aa) fasta scores%3B opt: 379%2C z-score: 425.8%2C E(): 3e-16%2C 30.3%25 identity in 297 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=integral membrane protein;protein_id=NP_639745.1;transl_table=11
NC_003903.1	RefSeq	gene	167601	167792	.	+	.	ID=gene8080;Dbxref=GeneID:1095250;Name=SCP1.172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.172
NC_003903.1	RefSeq	CDS	167601	167792	.	+	0	ID=cds7935;Parent=gene8080;Dbxref=Genbank:NP_639747.1,GeneID:1095250;Name=NP_639747.1;Note=possible integral membrane protein%2C len: 63aa%3B weak similarity to TR:Q9L0R5 (EMBL:AL160312)  integral membrane protein from Streptomyces coelicolor (117 aa) fasta scores%3B opt: 78%2C z-score: 131.4%2C E(): 7.5%2C 40.7%25 identity in 27 aa overlap. Contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=integral membrane protein;protein_id=NP_639747.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	167812	167816	.	+	.	ID=id10345;gbkey=RBS
NC_003903.1	RefSeq	gene	167825	168244	.	+	.	ID=gene8081;Dbxref=GeneID:1095251;Name=SCP1.173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.173
NC_003903.1	RefSeq	CDS	167825	168244	.	+	0	ID=cds7936;Parent=gene8081;Dbxref=Genbank:NP_639749.1,GeneID:1095251;Name=NP_639749.1;Note=possible membrane protein%2C len: 139aa%3B contains a possible membrane-spanning hydrophobic region.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639749.1;transl_table=11
NC_003903.1	RefSeq	gene	168241	168684	.	+	.	ID=gene8082;Dbxref=GeneID:1095252;Name=SCP1.174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.174
NC_003903.1	RefSeq	CDS	168241	168684	.	+	0	ID=cds7937;Parent=gene8082;Dbxref=Genbank:NP_639751.1,GeneID:1095252;Name=NP_639751.1;Note=possible membrane protein%2C len: 147aa%3B similar to TR:Q9KY94 (EMBL:AL356813)  septum site-determining protein from Streptomyces coelicolor (131 aa) fasta scores%3B opt: 129%2C z-score: 161.9%2C E(): 0.15%2C 33.3%25 identity in 141 aa overlap. Contains a possible membrane-spanning hydrophobic region.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639751.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	168671	168675	.	+	.	ID=id10346;Dbxref=GeneID:1095252;gbkey=RBS
NC_003903.1	RefSeq	gene	168681	169124	.	+	.	ID=gene8083;Dbxref=GeneID:1095253;Name=SCP1.175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.175
NC_003903.1	RefSeq	CDS	168681	169124	.	+	0	ID=cds7938;Parent=gene8083;Dbxref=Genbank:NP_639753.1,GeneID:1095253;Name=NP_639753.1;Note=possible membrane protein%2C len: 147aa%3B contains a possible membrane-spanning hydrophobic region.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639753.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	169116	169120	.	+	.	ID=id10347;Dbxref=GeneID:1095253;gbkey=RBS
NC_003903.1	RefSeq	gene	169131	172742	.	+	.	ID=gene8084;Dbxref=GeneID:1095254;Name=SCP1.176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.176
NC_003903.1	RefSeq	CDS	169131	172742	.	+	0	ID=cds7939;Parent=gene8084;Dbxref=Genbank:NP_639754.1,GeneID:1095254;Name=NP_639754.1;Note=possible large membrane protein%2C len: 1203aa%3B N-terminal region contains three possible membrane-spanning hydrophobic regions. Remainder similar to TR:Q9XAP0 (EMBL:AL078618) hypothetical protein from Streptomyces coelicolor (726 aa) fasta scores%3B opt: 457%2C z-score: 394.3%2C E(): 1.7e-14%2C 26.8%25 identity in 898 aa overlap.;gbkey=CDS;product=large membrane protein;protein_id=NP_639754.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	173057	173063	.	+	.	ID=id10348;gbkey=RBS
NC_003903.1	RefSeq	gene	173067	173675	.	+	.	ID=gene8085;Dbxref=GeneID:1095255;Name=SCP1.177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.177
NC_003903.1	RefSeq	CDS	173067	173675	.	+	0	ID=cds7940;Parent=gene8085;Dbxref=Genbank:NP_639756.1,GeneID:1095255;Name=NP_639756.1;Note=possible membrane protein%2C len: 202aa%3B contains three possible membrane-spanning hydrophobic regions. This gene lies in a region of unusually low GC content.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639756.1;transl_table=11
NC_003903.1	RefSeq	gene	173797	174033	.	+	.	ID=gene8086;Dbxref=GeneID:1095256;Name=SCP1.178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.178
NC_003903.1	RefSeq	CDS	173797	174033	.	+	0	ID=cds7941;Parent=gene8086;Dbxref=Genbank:NP_639758.1,GeneID:1095256;Name=NP_639758.1;Note=unknown%2C len: 78aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639758.1;transl_table=11
NC_003903.1	RefSeq	gene	174030	174191	.	+	.	ID=gene8087;Dbxref=GeneID:1095257;Name=SCP1.179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.179
NC_003903.1	RefSeq	CDS	174030	174191	.	+	0	ID=cds7942;Parent=gene8087;Dbxref=Genbank:NP_639760.1,GeneID:1095257;Name=NP_639760.1;Note=unknown%2C len: 53aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639760.1;transl_table=11
NC_003903.1	RefSeq	gene	174205	174516	.	+	.	ID=gene8088;Dbxref=GeneID:1095258;Name=SCP1.180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.180
NC_003903.1	RefSeq	CDS	174205	174516	.	+	0	ID=cds7943;Parent=gene8088;Dbxref=Genbank:NP_639761.1,GeneID:1095258;Name=NP_639761.1;Note=unknown%2C len: 103aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639761.1;transl_table=11
NC_003903.1	RefSeq	gene	174623	175622	.	-	.	ID=gene8089;Dbxref=GeneID:1095259;Name=SCP1.181c;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SCP1.181c;pseudo=true
NC_003903.1	RefSeq	sequence_feature	174623	175622	.	-	.	ID=id10349;Dbxref=GeneID:1095259;Note=possible pseudogene%2C function unknown%2C len: 1000nt%3B similar to SCP1.149c (369 aa) fasta scores%3B opt: 331%2C z-score: 405.0%2C E(): 4.9e-18%2C 44.2%25 identity in 120 aa overlap. Lies in a region of low G+C DNA.;gbkey=misc_feature
NC_003903.1	RefSeq	gene	175779	176534	.	+	.	ID=gene8090;Dbxref=GeneID:1095260;Name=SCP1.182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.182
NC_003903.1	RefSeq	CDS	175779	176534	.	+	0	ID=cds7944;Parent=gene8090;Dbxref=Genbank:NP_639763.1,GeneID:1095260;Name=NP_639763.1;Note=unknown%2C len: 251aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639763.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	176588	176592	.	+	.	ID=id10350;gbkey=RBS
NC_003903.1	RefSeq	gene	176599	177141	.	+	.	ID=gene8091;Dbxref=GeneID:1095261;Name=SCP1.183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.183
NC_003903.1	RefSeq	CDS	176599	177141	.	+	0	ID=cds7945;Parent=gene8091;Dbxref=Genbank:NP_639765.1,GeneID:1095261;Name=NP_639765.1;Note=unknown%2C len: 180aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639765.1;transl_table=11
NC_003903.1	RefSeq	gene	177213	177917	.	-	.	ID=gene8092;Dbxref=GeneID:1095262;Name=SCP1.183c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.183c
NC_003903.1	RefSeq	CDS	177213	177917	.	-	0	ID=cds7946;Parent=gene8092;Dbxref=Genbank:NP_639767.1,GeneID:1095262;Name=NP_639767.1;Note=unknown%2C len: 234aa%3B weakly similar to TR:O07246 (EMBL:Z96800) hypothetical protein from Mycobacterium tuberculosis (220 aa) fasta scores%3B opt: 129%2C z-score: 156.4%2C E(): 0.3%2C 29.2%25 identity in 161 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639767.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	177924	177927	.	-	.	ID=id10351;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	178150	178153	.	+	.	ID=id10352;gbkey=RBS
NC_003903.1	RefSeq	gene	178160	178438	.	+	.	ID=gene8093;Dbxref=GeneID:1095263;Name=SCP1.184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.184
NC_003903.1	RefSeq	CDS	178160	178438	.	+	0	ID=cds7947;Parent=gene8093;Dbxref=Genbank:NP_639768.1,GeneID:1095263;Name=NP_639768.1;Note=conserved hypothetical protein%2C len: 92aa%3B strongly similar to SCJ30.10c (TR:Q9S1X9 EMBL:AL109973) hypothetical protein from the chromosome end(s) of Streptomyces coelicolor (92 aa) fasta scores%3B opt: 499%2C z-score: 682.6%2C E(): 1.5e-30%2C 81.5%25 identity in 92 aa overlap. Also similar to SCE6.04 (TR:Q9KZT4 EMBL:AL353832) hypothetical protein from Streptomyces coelicolor (75 aa) fasta scores%3B opt: 107%2C z-score: 161.9%2C E(): 0.15%2C 30.9%25 identity in 81 aa overlap. Contains a TTA encoded leucine at residue 3%2C possible target for bldA regulation.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639768.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	178166	178168	.	+	.	ID=id10353;Dbxref=GeneID:1095263;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	178382	178388	.	+	.	ID=id10354;Dbxref=GeneID:1095263;gbkey=RBS
NC_003903.1	RefSeq	gene	178395	178949	.	+	.	ID=gene8094;Dbxref=GeneID:1095264;Name=SCP1.185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.185
NC_003903.1	RefSeq	CDS	178395	178949	.	+	0	ID=cds7948;Parent=gene8094;Dbxref=Genbank:NP_639770.1,GeneID:1095264;Name=NP_639770.1;Note=conserved hypothetical protein%2C len: 184aa%3B similar to other hypothetical proteins from Streptomyces coelicolor eg. SCE6.05 (TR:Q9KZT3 EMBL:AL353832) (159 aa) fasta scores%3B opt: 518%2C z-score: 663.1%2C E(): 1.8e-29%2C 48.8%25 identity in 164 aa overlap and SCJ30.09C (TR:Q9S1Y0 EMBL:AL109973) (96 aa) fasta scores%3B opt: 438%2C z-score: 566.0%2C E(): 4.6e-24%2C 83.3%25 identity in 78 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639770.1;transl_table=11
NC_003903.1	RefSeq	gene	178957	179805	.	+	.	ID=gene8095;Dbxref=GeneID:1095265;Name=SCP1.186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.186
NC_003903.1	RefSeq	CDS	178957	179805	.	+	0	ID=cds7949;Parent=gene8095;Dbxref=Genbank:NP_639772.1,GeneID:1095265;Name=NP_639772.1;Note=conserved hypothetical protein%2C len: 282aa%3B similar to other hypothetical proteins from streptomycetes eg. SCE6.06 (TR:Q9KZT2 EMBL:AL353832) from Streptomyces coelicolor (281 aa) fasta scores%3B opt: 882%2C z-score: 1083.5%2C E(): 0%2C 47.9%25 identity in 280 aa overlap. Note possible alternative downstream translational start site.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639772.1;transl_table=11
NC_003903.1	RefSeq	gene	179960	180511	.	+	.	ID=gene8096;Dbxref=GeneID:1095266;Name=SCP1.187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.187
NC_003903.1	RefSeq	CDS	179960	180511	.	+	0	ID=cds7950;Parent=gene8096;Dbxref=Genbank:NP_639774.1,GeneID:1095266;Name=NP_639774.1;Note=unknown%2C len: 183aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639774.1;transl_table=11
NC_003903.1	RefSeq	gene	180497	180781	.	-	.	ID=gene8097;Dbxref=GeneID:1095267;Name=SCP1.188c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.188c
NC_003903.1	RefSeq	CDS	180497	180781	.	-	0	ID=cds7951;Parent=gene8097;Dbxref=Genbank:NP_639777.1,GeneID:1095267;Name=NP_639777.1;Note=unknown%2C len: 94aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639777.1;transl_table=11
NC_003903.1	RefSeq	gene	181083	182222	.	+	.	ID=gene8098;Dbxref=GeneID:1095268;Name=SCP1.189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.189
NC_003903.1	RefSeq	CDS	181083	182222	.	+	0	ID=cds7952;Parent=gene8098;Dbxref=Genbank:NP_639779.1,GeneID:1095268;Name=NP_639779.1;Note=unknown%2C len: 379aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639779.1;transl_table=11
NC_003903.1	RefSeq	gene	182335	183168	.	-	.	ID=gene8099;Dbxref=GeneID:1095269;Name=SCP1.190c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.190c
NC_003903.1	RefSeq	CDS	182335	183168	.	-	0	ID=cds7953;Parent=gene8099;Dbxref=Genbank:NP_639780.1,GeneID:1095269;Name=NP_639780.1;Note=possible integrase/recombinase%2C len: 277aa%3B similar to many eg. SW:P20184 (YT23_STRFR) hypothetical 23.1 kDa protein in transposon Tn4556 from Streptomyces fradiae (205 aa) fasta scores%3B opt: 559%2C z-score: 616.8%2C E(): 6.9e-27%2C 78.4%25 identity in 111 aa overlap and TR:O30680 (EMBL:AF015088)  plasmid multimer resolution protein from plasmid pFAJ2600 of Rhodococcus erythropolis (306 aa) fasta scores%3B opt: 276%2C z-score: 308.0%2C E(): 1.1e-09%2C 33.9%25 identity in 227 aa overlap.;gbkey=CDS;product=integrase/recombinase;protein_id=NP_639780.1;transl_table=11
NC_003903.1	RefSeq	gene	183470	183649	.	+	.	ID=gene8100;Dbxref=GeneID:1095270;Name=SCP1.191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.191
NC_003903.1	RefSeq	CDS	183470	183649	.	+	0	ID=cds7954;Parent=gene8100;Dbxref=Genbank:NP_639783.1,GeneID:1095270;Name=NP_639783.1;Note=unknown%2C len: 59aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639783.1;transl_table=11
NC_003903.1	RefSeq	gene	183646	184086	.	+	.	ID=gene8101;Dbxref=GeneID:1095271;Name=SCP1.192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.192
NC_003903.1	RefSeq	CDS	183646	184086	.	+	0	ID=cds7955;Parent=gene8101;Dbxref=Genbank:NP_639785.1,GeneID:1095271;Name=NP_639785.1;Note=unknown%2C len: 146aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639785.1;transl_table=11
NC_003903.1	RefSeq	gene	184494	185051	.	+	.	ID=gene8102;Dbxref=GeneID:1095272;Name=SCP1.194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.194
NC_003903.1	RefSeq	CDS	184494	185051	.	+	0	ID=cds7956;Parent=gene8102;Dbxref=Genbank:NP_639786.1,GeneID:1095272;Name=NP_639786.1;Note=unknown%2C len: 185aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639786.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	184795	190229	.	+	.	ID=id10355;Note=Smallest region isolated which was shown to contain a functional origin of replication (Redenbach et al. (1999) Plasmid 42: 174-185). Region previously sequenced as EMBL:AF195093 Streptomyces coelicolor A3(2) plasmid SCP1  DNA-primase/helicase gene%2C complete cds%3B and unknown gene%3B label: AF195093;gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	184913	185705	.	+	.	ID=id10356;Note=Low GC repeat region. Contains a number of direct and inverted repeats and is thought to represent the replication initiation region (Redenbach et al. (1999) Plasmid 42: 174-185).%3B label: ori;gbkey=repeat_region
NC_003903.1	RefSeq	gene	185658	186707	.	-	.	ID=gene8103;Dbxref=GeneID:1095273;Name=SCP1.195c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.195c
NC_003903.1	RefSeq	CDS	185658	186707	.	-	0	ID=cds7957;Parent=gene8103;Dbxref=Genbank:NP_639788.1,GeneID:1095273;Name=NP_639788.1;Note=possible ATP/GTP-binding protein%2C len: 349aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Note - correct CDS location may be on opposite strand.;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639788.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	186018	186041	.	-	.	ID=id10357;Dbxref=GeneID:1095273;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	186700	186704	.	+	.	ID=id10358;gbkey=RBS
NC_003903.1	RefSeq	gene	186710	188230	.	+	.	ID=gene8104;Dbxref=GeneID:1095274;Name=SCP1.196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.196
NC_003903.1	RefSeq	CDS	186710	188230	.	+	0	ID=cds7958;Parent=gene8104;Dbxref=Genbank:NP_639791.1,GeneID:1095274;Name=NP_639791.1;Note=possible DNA primase/helicase%2C len: 506aa%3B previously sequenced and annotated as TR:Q9L8S3 (EMBL:AF195093)%2C note discrepency: SCP1.196 translational start site is 239 bases upstream of that designated for TR:Q9L8S3. Similar to others eg. TR:Q9ZX10 (EMBL:AF068845) GP70 from Mycobacteriophage TM4 (867 aa) fasta scores%3B opt: 1104%2C z-score: 1313.5%2C E(): 0%2C 42.6%25 identity in 470 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=DNA primase/helicase;protein_id=NP_639791.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	186717	186720	.	-	.	ID=id10359;gbkey=RBS
NC_003903.1	RefSeq	sequence_feature	187433	187456	.	+	.	ID=id10360;Dbxref=GeneID:1095274;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	gene	188227	188628	.	+	.	ID=gene8105;Dbxref=GeneID:1095275;Name=SCP1.197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.197
NC_003903.1	RefSeq	CDS	188227	188628	.	+	0	ID=cds7959;Parent=gene8105;Dbxref=Genbank:NP_639793.1,GeneID:1095275;Name=NP_639793.1;Note=unknown%2C len: 133aa%3B previously sequenced as TR:Q9RMI9 (EMBL:AF195093).;gbkey=CDS;product=hypothetical protein;protein_id=NP_639793.1;transl_table=11
NC_003903.1	RefSeq	gene	188734	189642	.	+	.	ID=gene8106;Dbxref=GeneID:1095276;Name=SCP1.198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.198
NC_003903.1	RefSeq	CDS	188734	189642	.	+	0	ID=cds7960;Parent=gene8106;Dbxref=Genbank:NP_639794.1,GeneID:1095276;Name=NP_639794.1;Note=unknown%2C len: 302aa%3B Note possible alternative downstream translational start sites.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639794.1;transl_table=11
NC_003903.1	RefSeq	gene	189929	191446	.	-	.	ID=gene8107;Dbxref=GeneID:1095277;Name=SCP1.199c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.199c
NC_003903.1	RefSeq	CDS	189929	191446	.	-	0	ID=cds7961;Parent=gene8107;Dbxref=Genbank:NP_639796.1,GeneID:1095277;Name=NP_639796.1;Note=possible secreted esterase%2C len: 505aa%3B similar to TR:Q54345 (EMBL:Z50108) esterase precursor from Streptomyces lividans (509 aa) fasta scores%3B opt: 659%2C z-score: 693.3%2C E(): 3.8e-31%2C 34.4%25 identity in 509 aa overlap. Contains Pfam match to entry PF00089 trypsin%2C Trypsin and possible cleavable N-terminal signal sequence.;gbkey=CDS;product=secreted esterase;protein_id=NP_639796.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	190805	191362	.	-	.	ID=id10361;Dbxref=GeneID:1095277;Note=Pfam match to entry PF00089 trypsin%2C Trypsin%2C score 57.10%2C E-value 2.8e-17;gbkey=misc_feature
NC_003903.1	RefSeq	gene	191837	192337	.	-	.	ID=gene8108;Dbxref=GeneID:1095278;Name=SCP1.200c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.200c
NC_003903.1	RefSeq	CDS	191837	192337	.	-	0	ID=cds7962;Parent=gene8108;Dbxref=Genbank:NP_639798.1,GeneID:1095278;Name=NP_639798.1;Note=possible secreted protein%2C len: 166aa%3B similar to TR:O87846 (EMBL:AL031013)  secreted protein from Streptomyces coelicolor (168 aa) fasta scores%3B opt: 313%2C z-score: 373.4 %2CE(): 2.5e-13%2C 40.3%25 identity in 154 aa overlap. Contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;product=secreted protein;protein_id=NP_639798.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	192908	195647	.	+	.	ID=id10362;Note=Degenerate GC-rich repeat region;gbkey=repeat_region
NC_003903.1	RefSeq	gene	192944	196954	.	+	.	ID=gene8109;Dbxref=GeneID:1095279;Name=SCP1.201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.201
NC_003903.1	RefSeq	CDS	192944	196954	.	+	0	ID=cds7963;Parent=gene8109;Dbxref=Genbank:NP_639800.1,GeneID:1095279;Name=NP_639800.1;Note=unknown%2C len: 1336aa%3B similar to TR:O87848 (EMBL:AL031013) hypothetical protein from Streptomyces coelicolor (1147 aa) fasta scores%3B opt: 1652%2C z-score: 1478.4%2C E(): 0%2C 38.7%25 identity in 926 aa overlap. Note possible alternative upstream translational start site which would give a possible N-terminal signal sequence. Contains several possible coiled-coil regions.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639800.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	196956	196961	.	+	.	ID=id10363;gbkey=RBS
NC_003903.1	RefSeq	gene	196963	197466	.	+	.	ID=gene8110;Dbxref=GeneID:1095280;Name=SCP1.202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.202
NC_003903.1	RefSeq	CDS	196963	197466	.	+	0	ID=cds7964;Parent=gene8110;Dbxref=Genbank:NP_639802.1,GeneID:1095280;Name=NP_639802.1;Note=unknown%2C len: 167aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639802.1;transl_table=11
NC_003903.1	RefSeq	gene	198102	198614	.	-	.	ID=gene8111;Dbxref=GeneID:1095281;Name=SCP1.203c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.203c
NC_003903.1	RefSeq	CDS	198102	198614	.	-	0	ID=cds7965;Parent=gene8111;Dbxref=Genbank:NP_639803.1,GeneID:1095281;Name=NP_639803.1;Note=unknown%2C len: 170aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639803.1;transl_table=11
NC_003903.1	RefSeq	gene	198693	200354	.	-	.	ID=gene8112;Dbxref=GeneID:1095282;Name=SCP1.204c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.204c
NC_003903.1	RefSeq	CDS	198693	200354	.	-	0	ID=cds7966;Parent=gene8112;Dbxref=Genbank:NP_639805.1,GeneID:1095282;Name=NP_639805.1;Note=unknown%2C len: 553aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639805.1;transl_table=11
NC_003903.1	RefSeq	gene	200576	203101	.	-	.	ID=gene8113;Dbxref=GeneID:1095283;Name=SCP1.205c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.205c
NC_003903.1	RefSeq	CDS	200576	203101	.	-	0	ID=cds7967;Parent=gene8113;Dbxref=Genbank:NP_639807.1,GeneID:1095283;Name=NP_639807.1;Note=unknown%2C len: 841aa%3B weak but full length similarity to TR:O87242 (EMBL:AE001272) hypothetical protein from plasmid pMRC01 of Lactococcus lactis blastp scores%3B Identities %3D 223/824 (27%25)%2C Positives %3D 406/824 (49%25).;gbkey=CDS;product=hypothetical protein;protein_id=NP_639807.1;transl_table=11
NC_003903.1	RefSeq	gene	203314	203841	.	-	.	ID=gene8114;Dbxref=GeneID:1095284;Name=SCP1.206c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.206c
NC_003903.1	RefSeq	CDS	203314	203841	.	-	0	ID=cds7968;Parent=gene8114;Dbxref=Genbank:NP_639810.1,GeneID:1095284;Name=NP_639810.1;Note=unknown%2C len: 175aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639810.1;transl_table=11
NC_003903.1	RefSeq	gene	203838	206540	.	-	.	ID=gene8115;Dbxref=GeneID:1095285;Name=SCP1.207c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.207c
NC_003903.1	RefSeq	CDS	203838	206540	.	-	0	ID=cds7969;Parent=gene8115;Dbxref=Genbank:NP_639812.1,GeneID:1095285;Name=NP_639812.1;Note=unknown%2C len: 900aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639812.1;transl_table=11
NC_003903.1	RefSeq	gene	207016	208056	.	+	.	ID=gene8116;Dbxref=GeneID:1095286;Name=SCP1.208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.208
NC_003903.1	RefSeq	CDS	207016	208056	.	+	0	ID=cds7970;Parent=gene8116;Dbxref=Genbank:NP_639814.1,GeneID:1095286;Name=NP_639814.1;Note=unknown%2C len: 346aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639814.1;transl_table=11
NC_003903.1	RefSeq	gene	208371	209366	.	-	.	ID=gene8117;Dbxref=GeneID:1095287;Name=SCP1.209c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.209c
NC_003903.1	RefSeq	CDS	208371	209366	.	-	0	ID=cds7971;Parent=gene8117;Dbxref=Genbank:NP_639815.1,GeneID:1095287;Name=NP_639815.1;Note=unknown%2C len: 331aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639815.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	209373	209379	.	-	.	ID=id10364;gbkey=RBS
NC_003903.1	RefSeq	gene	209380	209709	.	-	.	ID=gene8118;Dbxref=GeneID:1095288;Name=SCP1.210c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.210c
NC_003903.1	RefSeq	CDS	209380	209709	.	-	0	ID=cds7972;Parent=gene8118;Dbxref=Genbank:NP_639816.1,GeneID:1095288;Name=NP_639816.1;Note=possible membrane protein%2C len: 109aa%3B contains two possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639816.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	210032	210083	.	-	.	ID=id10365;Note=Score 54: 22/25 ( 88%25) matches%2C 0 gaps%2C 2 base loop.;gbkey=stem_loop
NC_003903.1	RefSeq	gene	210103	210534	.	-	.	ID=gene8119;Dbxref=GeneID:1095289;Name=SCP1.211c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.211c
NC_003903.1	RefSeq	CDS	210103	210534	.	-	0	ID=cds7973;Parent=gene8119;Dbxref=Genbank:NP_639817.1,GeneID:1095289;Name=NP_639817.1;Note=unknown%2C len: 143aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639817.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	210798	210801	.	+	.	ID=id10366;gbkey=RBS
NC_003903.1	RefSeq	gene	211100	212794	.	+	.	ID=gene8120;Dbxref=GeneID:1095290;Name=SCP1.212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.212
NC_003903.1	RefSeq	CDS	211100	212794	.	+	0	ID=cds7974;Parent=gene8120;Dbxref=Genbank:NP_639818.1,GeneID:1095290;Name=NP_639818.1;Note=possible bifunctional undecaprenyl pyrophosphate synthetase/phytoene synthase%2C len: 564aa%3B C-terminal similar to many undecaprenyl pyrophosphate synthetases eg. SW:Q47675 (UPPS_ECOLI) undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) from Escherichia coli (253 aa) blastp scores%3B Identities %3D 94/226 (41%25)%2C Positives %3D 132/226 (58%25). N-terminal similar to many phytoene synthases eg. SW:P54977 (CRTB_STRGR) phytoene synthase (EC 2.5.1.-) from Streptomyces griseus (342 aa) blastp scores%3B Identities %3D 82/298 (27%25)%2C Positives %3D 133/298 (44%25). C-terminal region contains Pfam match to entry PF01255 UPP_synthetase%2C  undecaprenyl diphosphate synthase. Contains a TTA encoded leucine at residue 11%2C possible target for bldA regulation.;gbkey=CDS;product=bifunctional undecaprenyl pyrophosphate synthetase/phytoene synthase;protein_id=NP_639818.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	211130	211132	.	+	.	ID=id10367;Dbxref=GeneID:1095290;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	212078	212740	.	+	.	ID=id10368;Dbxref=GeneID:1095290;Note=Pfam match to entry PF01255 UPP_synthetase%2C  undecaprenyl diphosphate synthase%2C score 262.30%2C E-value 6.3e-75;gbkey=misc_feature
NC_003903.1	RefSeq	gene	212818	213495	.	-	.	ID=gene8121;Dbxref=GeneID:1095291;Name=SCP1.213c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.213c
NC_003903.1	RefSeq	CDS	212818	213495	.	-	0	ID=cds7975;Parent=gene8121;Dbxref=Genbank:NP_639819.1,GeneID:1095291;Name=NP_639819.1;Note=possible secreted protein%2C len: 225aa%3B contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;product=secreted protein;protein_id=NP_639819.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	213603	215210	.	+	.	ID=id10369;Note=Possible transposon comprising CDSs SCP1.14%2C SCP1.15 and SCP1.16%3B label: transposon?;gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	213603	213638	.	+	.	ID=id10370;Note=Part of inverted repeat bounding possible transposon comprising CDSs SCP1.14%2C SCP1.15 and SCP1.16;gbkey=repeat_region
NC_003903.1	RefSeq	gene	213631	214053	.	+	.	ID=gene8122;Dbxref=GeneID:1095292;Name=SCP1.214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.214
NC_003903.1	RefSeq	CDS	213631	214053	.	+	0	ID=cds7976;Parent=gene8122;Dbxref=Genbank:NP_639820.1,GeneID:1095292;Name=NP_639820.1;Note=possible transposase%2C len: 140aa%3B similar to many eg. TR:Q9XAE6 (EMBL:AL079356)  transposase from Streptomyces coelicolor (136 aa) fasta scores%3B opt: 536%2C z-score: 679.6%2C E(): 2.2e-30%2C 60.8%25 identity in 143 aa overlap. Contains Pfam match to entry PF01511 Transposase_6%2C Transposase. Part of possible transposon comprising CDSs SCP1.14%2C SCP1.15 and SCP1.16. Translation may involve a frameshift into downstream CDS.;gbkey=CDS;product=transposase;protein_id=NP_639820.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	213733	213966	.	+	.	ID=id10371;Dbxref=GeneID:1095292;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 20.70%2C E-value 5.2e-06;gbkey=misc_feature
NC_003903.1	RefSeq	gene	214050	214520	.	+	.	ID=gene8123;Dbxref=GeneID:1095293;Name=SCP1.215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.215
NC_003903.1	RefSeq	CDS	214050	214520	.	+	0	ID=cds7977;Parent=gene8123;Dbxref=Genbank:NP_639821.1,GeneID:1095293;Name=NP_639821.1;Note=possible transposase%2C len: 156aa%3B similar to many eg. TR:Q9XAE7 (EMBL:AL079356)  transposase from Streptomyces coelicolor (148 aa) fasta scores%3B opt: 557%2C z-score: 682.8%2C E(): 1.5e-30%2C 58.0%25 identity in 150 aa overlap. Part of possible transposon comprising CDSs SCP1.14%2C SCP1.15 and SCP1.16. Translation may involve a frameshift into upstream CDS.;gbkey=CDS;product=transposase;protein_id=NP_639821.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	214573	214578	.	+	.	ID=id10372;gbkey=RBS
NC_003903.1	RefSeq	gene	214585	215106	.	+	.	ID=gene8124;Dbxref=GeneID:1095294;Name=SCP1.216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.216
NC_003903.1	RefSeq	CDS	214585	215106	.	+	0	ID=cds7978;Parent=gene8124;Dbxref=Genbank:NP_639822.1,GeneID:1095294;Name=NP_639822.1;Note=unknown%2C len: 173aa%3B part of possible transposon comprising CDSs SCP1.14%2C SCP1.15 and SCP1.16.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639822.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	215175	215210	.	+	.	ID=id10373;Note=Part of inverted repeat bounding possible transposon comprising CDSs SCP1.14%2C SCP1.15 and SCP1.16;gbkey=repeat_region
NC_003903.1	RefSeq	repeat_region	215434	217438	.	+	.	ID=id10374;Note=Inverted and repeated at 126134..128146;gbkey=repeat_region
NC_003903.1	RefSeq	gene	215655	217487	.	-	.	ID=gene8125;Dbxref=GeneID:1095295;Name=SCP1.216Ac;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.216Ac
NC_003903.1	RefSeq	CDS	215655	217487	.	-	0	ID=cds7979;Parent=gene8125;Dbxref=REBASE:ScoA3ORF216P,Genbank:NP_639823.1,GeneID:1095295;Name=NP_639823.1;Note=possible helicase%2C len: 610aa%3B inverted and duplicated therefore similar to SCP1.136 (879 aa) fasta scores%3B .opt: 3788%2C z-score: 4060.4%2C E(): 0%2C 93.0%25 identity in 599 aa overlap.;gbkey=CDS;product=helicase;protein_id=NP_639823.1;transl_table=11
NC_003903.1	RefSeq	gene	217465	217674	.	+	.	ID=gene8126;Dbxref=GeneID:1095296;Name=SCP1.217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.217
NC_003903.1	RefSeq	CDS	217465	217674	.	+	0	ID=cds7980;Parent=gene8126;Dbxref=Genbank:NP_639824.1,GeneID:1095296;Name=NP_639824.1;Note=unknown%2C len: 69aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639824.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	217687	217733	.	+	.	ID=id10375;Note=Score 57: 19/19 (100%25) matches%2C 0 gaps%2C 9 base loop;gbkey=stem_loop
NC_003903.1	RefSeq	gene	217949	219094	.	-	.	ID=gene8127;Dbxref=GeneID:1095297;Name=SCP1.217Ac;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.217Ac
NC_003903.1	RefSeq	CDS	217949	219094	.	-	0	ID=cds7981;Parent=gene8127;Dbxref=Genbank:NP_639825.1,GeneID:1095297;Name=NP_639825.1;Note=unknown%2C len: 381aa%3B flanked by inverted repeat at 217861-217881 and 219205-219225 (Score 56: 20/21 ( 95%25) matches%2C 0 gaps).;gbkey=CDS;product=hypothetical protein;protein_id=NP_639825.1;transl_table=11
NC_003903.1	RefSeq	gene	219314	219700	.	-	.	ID=gene8128;Dbxref=GeneID:1095298;Name=SCP1.218c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.218c
NC_003903.1	RefSeq	CDS	219314	219700	.	-	0	ID=cds7982;Parent=gene8128;Dbxref=Genbank:NP_639826.1,GeneID:1095298;Name=NP_639826.1;Note=unknown%2C len: 128aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639826.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	219632	219694	.	+	.	ID=id10376;Note=Directly repeated at 128527..128589. Both copies are close to possible plasmid partition genes - relevance unknown.;gbkey=repeat_region
NC_003903.1	RefSeq	gene	219981	220502	.	+	.	ID=gene8129;Dbxref=GeneID:1095299;Name=SCP1.219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.219
NC_003903.1	RefSeq	CDS	219981	220502	.	+	0	ID=cds7983;Parent=gene8129;Dbxref=Genbank:NP_639827.1,GeneID:1095299;Name=NP_639827.1;Note=unknown%2C len: 173aa%3B similar to others from Streptomyces coelicolor eg. TR:Q9Z552 (EMBL:AL035212) hypothetical protein (162 aa) blastp scores%3B Identities %3D 60/162 (37%25)%2C Positives %3D 80/162 (49%25) and SW:P14706 (YM2_STRCO) mini-circle hypothetical 13.3 kDa protein (122 aa) blastp scores%3B Identities %3D 38/118 (32%25)%2C Positives %3D 60/118 (50%25).;gbkey=CDS;product=hypothetical protein;protein_id=NP_639827.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	220543	221375	.	-	.	ID=id10377;Note=pseudogene%2C possible degraded transposase%2C len: 833 nt%3B similar to many eg. TR:Q9KXL3 (EMBL:AL357524)  transposase from Streptomyces coelicolor (281 aa) fasta scores%3B opt: 441%2C z-score: 558.9%2C E(): 1.2e-23%2C 84.9%25 identity in 73 aa overlap.;gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	220543	221375	.	-	.	ID=id10378;Note=Inverted and repeated at 158174..159024%2C frameshifted.;gbkey=repeat_region;gene=SCP1.220c
NC_003903.1	RefSeq	ribosome_entry_site	221464	221468	.	+	.	ID=id10379;gbkey=RBS
NC_003903.1	RefSeq	gene	221485	222648	.	+	.	ID=gene8130;Dbxref=GeneID:1095301;Name=parA2;gbkey=Gene;gene=parA2;gene_biotype=protein_coding;locus_tag=SCP1.221
NC_003903.1	RefSeq	CDS	221485	222648	.	+	0	ID=cds7984;Parent=gene8130;Dbxref=Genbank:NP_639828.1,GeneID:1095301;Name=NP_639828.1;Note=parA2%2C possible plasmid partitioning protein%2C len: 387aa%3B weakly similar to many eg. SW:P08866 (SOPA_ECOLI) sopA protein essential for F plasmid partitioning in Escherichia coli (388 aa) fasta scores%3B opt: 195%2C z-score: 215.5%2C E(): 2.9e-05%2C 27.7%25 identity in 213 aa overlap. Contains Pfam match to entry PF00991 ParA%2C ParA family ATPase. This CDS is directly duplicated at 221485..222648 (ParA1%2C SCP1.138) fasta scores%3B opt: 980%2C z-score: 954.5%2C E(): 0%2C 55.4%25 identity in 424 aa overlap.;gbkey=CDS;gene=parA2;product=plasmid partitioning protein%2C para2;protein_id=NP_639828.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	221504	222592	.	+	.	ID=id10380;Dbxref=GeneID:1095301;Note=Direct%2C degenerate%2C frameshifted%2C repeated at 128840..130040;gbkey=repeat_region;gene=parA2
NC_003903.1	RefSeq	sequence_feature	222121	222462	.	+	.	ID=id10381;Dbxref=GeneID:1095301;Note=Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 31.90%2C E-value 2.7e-06;gbkey=misc_feature;gene=parA2
NC_003903.1	RefSeq	gene	222645	223790	.	+	.	ID=gene8131;Dbxref=GeneID:1095302;Name=parB2;gbkey=Gene;gene=parB2;gene_biotype=protein_coding;locus_tag=SCP1.222
NC_003903.1	RefSeq	CDS	222645	223790	.	+	0	ID=cds7985;Parent=gene8131;Dbxref=Genbank:NP_639829.1,GeneID:1095302;Name=NP_639829.1;Note=parB2%2C possible plasmid partitioning protein%2C len: 381aa%3B weakly similar to many eg. SW:P26497 (SP0J_BACSU) Spo0J protein required for initiation of sporulation and normal chromosome segregation in Bacillus subtilis (282 aa) fasta scores%3B opt: 213%2C z-score: 210.9%2C E(): 5.3e-05%2C 30.2%25 identity in 212 aa overlap. Contains Pfam match to entry PF02195 ParBc%2C ParB-like nuclease domain. This CDS is directly duplicated at 130087..131214 (ParB1%2C SCP1.139) fasta scores%3B opt: 566%2C z-score: 538.4%2C E(): 1.8e-25%2C 33.6%25 identity in 384 aa overlap.;gbkey=CDS;gene=parB2;product=plasmid partitioning protein%2C parb2;protein_id=NP_639829.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	222768	223088	.	+	.	ID=id10382;Dbxref=GeneID:1095302;Note=Pfam match to entry PF02195 ParBc%2C ParB-like nuclease domain%2C score 45.80%2C E-value 9.3e-10;gbkey=misc_feature;gene=parB2
NC_003903.1	RefSeq	gene	224000	224353	.	-	.	ID=gene8132;Dbxref=GeneID:1095303;Name=SCP1.223c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.223c
NC_003903.1	RefSeq	CDS	224000	224353	.	-	0	ID=cds7986;Parent=gene8132;Dbxref=Genbank:NP_639830.1,GeneID:1095303;Name=NP_639830.1;Note=unknown%2C len: 117aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639830.1;transl_table=11
NC_003903.1	RefSeq	gene	224350	227991	.	-	.	ID=gene8133;Dbxref=GeneID:1095304;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=SCP1.224c
NC_003903.1	RefSeq	CDS	224350	227991	.	-	0	ID=cds7987;Parent=gene8133;Dbxref=Genbank:NP_639831.1,GeneID:1095304;Name=NP_639831.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=NP_639831.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	227737	227937	.	-	.	ID=id10383;Dbxref=GeneID:1095304;Note=Pfam match to entry PF02231 PHP_N%2C PHP domain N-terminal region%2C score 101.70%2C E-value 1.5e-26;gbkey=misc_feature;gene=dnaE
NC_003903.1	RefSeq	gene	228782	229135	.	+	.	ID=gene8134;Dbxref=GeneID:1095305;Name=23.ORF4;gbkey=Gene;gene=23.ORF4;gene_biotype=protein_coding;locus_tag=SCP1.225
NC_003903.1	RefSeq	CDS	228782	229135	.	+	0	ID=cds7988;Parent=gene8134;Dbxref=Genbank:NP_639832.1,GeneID:1095305;Name=NP_639832.1;Note=unknown%2C len: 117aa%3B previously partially sequenced and annotated as TR:Q9JN71 (EMBL:AJ276673). Note possible alternative downstream translational start sites.;gbkey=CDS;gene=23.ORF4;product=hypothetical protein;protein_id=NP_639832.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	228898	251812	.	+	.	ID=id10384;Note=Region previously sequenced as EMBL:AJ276673 Streptomyces coelicolor partial SCP1 plasmid including genes for methylenomycin biosynthesis%3B label: AJ276673;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	229124	229130	.	+	.	ID=id10385;Dbxref=GeneID:1095305;gbkey=RBS;gene=23.ORF4
NC_003903.1	RefSeq	gene	229131	229518	.	+	.	ID=gene8135;Dbxref=GeneID:1095306;Name=23.ORF3;gbkey=Gene;gene=23.ORF3;gene_biotype=protein_coding;locus_tag=SCP1.226
NC_003903.1	RefSeq	CDS	229132	229518	.	+	0	ID=cds7989;Parent=gene8135;Dbxref=Genbank:NP_639833.1,GeneID:1095306;Name=NP_639833.1;Note=unknown%2C len: 128aa%3B previously sequenced and annotated as TR:Q9JN72 (EMBL:AJ276673). Similar to TR:Q9KXJ3 (EMBL:AL357591) hypothetical protein from Streptomyces coelicolor (128 aa) fasta scores%3B opt: 406%2C z-score: 539.2%2C E(): 1.5e-22%2C 52.3%25 identity in 128 aa overlap.;gbkey=CDS;gene=23.ORF3;product=hypothetical protein;protein_id=NP_639833.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	229665	229668	.	+	.	ID=id10386;gbkey=RBS
NC_003903.1	RefSeq	gene	229671	230153	.	+	.	ID=gene8136;Dbxref=GeneID:1095307;Name=23.ORF2;gbkey=Gene;gene=23.ORF2;gene_biotype=protein_coding;locus_tag=SCP1.227
NC_003903.1	RefSeq	CDS	229671	230153	.	+	0	ID=cds7990;Parent=gene8136;Dbxref=Genbank:NP_639834.1,GeneID:1095307;Name=NP_639834.1;Note=unknown%2C len: 160aa%3B previously sequenced and annotated as TR:Q9JN73 (EMBL:AJ276673).;gbkey=CDS;gene=23.ORF2;product=hypothetical protein;protein_id=NP_639834.1;transl_table=11
NC_003903.1	RefSeq	gene	230263	230964	.	-	.	ID=gene8137;Dbxref=GeneID:1095308;Name=23.ORF1;gbkey=Gene;gene=23.ORF1;gene_biotype=protein_coding;locus_tag=SCP1.227c
NC_003903.1	RefSeq	CDS	230263	230964	.	-	0	ID=cds7991;Parent=gene8137;Dbxref=Genbank:NP_639835.1,GeneID:1095308;Name=NP_639835.1;Note=unknown%2C len: 233aa%3B previously sequenced and annotated as TR:Q9JN74 (EMBL:AJ276673). Similar to TR:Q9KZ23 (EMBL:AL355752)  reductase from Streptomyces coelicolor (366 aa) fasta scores%3B opt: 496%2C z-score: 569.0%2C E(): 3.2e-24%2C 38.2%25 identity in 212 aa overlap.;gbkey=CDS;gene=23.ORF1;product=hypothetical protein;protein_id=NP_639835.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	230970	230975	.	-	.	ID=id10387;gbkey=RBS
NC_003903.1	RefSeq	gene	231676	232200	.	-	.	ID=gene8138;Dbxref=GeneID:1095309;Name=mmyF;gbkey=Gene;gene=mmyF;gene_biotype=protein_coding;locus_tag=SCP1.228c
NC_003903.1	RefSeq	CDS	231676	232200	.	-	0	ID=cds7992;Parent=gene8138;Dbxref=Genbank:NP_639836.1,GeneID:1095309;Name=NP_639836.1;Note=mmyF%2C possible oxidoreductase%2C len: 174aa%3B previously sequenced and annotated as TR:Q9JN75 (EMBL:AJ276673). Similar to many oxidoreductases eg. N-terminal region of SW:P54990 (NTAB_CHEHE) nitrilotriacetate monooxygenase component B (EC 1.14.13.-) from Chelatobacter heintzii (322 aa) fasta scores%3B opt: 419%2C z-score: 522.1%2C E(): 1.3e-21%2C 41.4%25 identity in 169 aa overlap and SW:Q02058 (DIM6_STRCO) actinorhodin polyketide dimerase from Streptomyces coelicolor (177 aa) fasta scores%3B opt: 295%2C z-score: 373.9%2C E(): 2.3e-13%2C 31.0%25 identity in 158 aa overlap. Contains Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain.;gbkey=CDS;gene=mmyF;product=oxidoreductase%2C mmyf;protein_id=NP_639836.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	231685	232125	.	-	.	ID=id10388;Dbxref=GeneID:1095309;Note=Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain%2C score 188.10%2C E-value 1.4e-52;gbkey=misc_feature;gene=mmyF
NC_003903.1	RefSeq	ribosome_entry_site	232206	232211	.	-	.	ID=id10389;gbkey=RBS
NC_003903.1	RefSeq	gene	232231	232692	.	-	.	ID=gene8139;Dbxref=GeneID:1095310;Name=mmyY;gbkey=Gene;gene=mmyY;gene_biotype=protein_coding;locus_tag=SCP1.229c
NC_003903.1	RefSeq	CDS	232231	232692	.	-	0	ID=cds7993;Parent=gene8139;Dbxref=Genbank:NP_639837.1,GeneID:1095310;Name=NP_639837.1;Note=mmyY%2C hypothetical protein%2C len: 153aa%3B previously partially sequenced and annotated as TR:Q9JN76 (EMBL:AJ276673).;gbkey=CDS;gene=mmyY;product=hypothetical protein;protein_id=NP_639837.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	232697	232704	.	-	.	ID=id10390;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	232915	232918	.	+	.	ID=id10391;gbkey=RBS
NC_003903.1	RefSeq	gene	232923	233864	.	+	.	ID=gene8140;Dbxref=GeneID:1095311;Name=mmyB;gbkey=Gene;gene=mmyB;gene_biotype=protein_coding;locus_tag=SCP1.230
NC_003903.1	RefSeq	CDS	232923	233864	.	+	0	ID=cds7994;Parent=gene8140;Dbxref=Genbank:NP_639838.1,GeneID:1095311;Name=NP_639838.1;Note=mmyB%2C possible DNA-binding protein%2C len: 313aa%3B previously sequenced and annotated as TR:Q9JN77 (EMBL:AJ276673). Similar to many from Streptomyces coelicolor eg. TR:Q9RDF4 (EMBL:AL136503)  DNA-binding protein (294 aa) fasta scores%3B opt: 670%2C z-score: 810.9%2C E(): 0%2C 43.1%25 identity in 255 aa overlap. Contains helix-turn-helix motif at residue 52-73 (Score 1329 (+3.71 SD)). Contains a TTA encoded leucine at residue 23%2C possible target for bldA regulation.;gbkey=CDS;gene=mmyB;product=DNA-binding protein%2C mmyb;protein_id=NP_639838.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	232989	232991	.	+	.	ID=id10392;Dbxref=GeneID:1095311;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=mmyB
NC_003903.1	RefSeq	ribosome_entry_site	233937	233944	.	+	.	ID=id10393;gbkey=RBS
NC_003903.1	RefSeq	gene	233951	234604	.	+	.	ID=gene8141;Dbxref=GeneID:1095312;Name=mmyQ;gbkey=Gene;gene=mmyQ;gene_biotype=protein_coding;locus_tag=SCP1.231
NC_003903.1	RefSeq	CDS	233951	234604	.	+	0	ID=cds7995;Parent=gene8141;Dbxref=Genbank:NP_639839.1,GeneID:1095312;Name=NP_639839.1;Note=mmyQ%2C hypothetical protein%2C len: 217aa%3B previously sequenced and annotated as TR:Q9JN78 (EMBL:AJ276673). Similar to TR:Q9L1E0 (EMBL:AL157916) hypothetical protein from Streptomyces coelicolor (220 aa) fasta scores%3B opt: 314%2C z-score: 377.8%2C E(): 1.4e-13%2C 35.2%25 identity in 199 aa overlap.;gbkey=CDS;gene=mmyQ;product=hypothetical protein;protein_id=NP_639839.1;transl_table=11
NC_003903.1	RefSeq	gene	234674	235837	.	+	.	ID=gene8142;Dbxref=GeneID:1095313;Name=mmyE;gbkey=Gene;gene=mmyE;gene_biotype=protein_coding;locus_tag=SCP1.232
NC_003903.1	RefSeq	CDS	234674	235837	.	+	0	ID=cds7996;Parent=gene8142;Dbxref=Genbank:NP_639840.1,GeneID:1095313;Name=NP_639840.1;Note=mmyE%2C possible enoyl reductase%2C len: 387aa%3B previously sequenced and annotated as TR:Q9JN79 (EMBL:AJ276673). Similar to SW:P77258 (NEMA_ECOLI) N-ethylmaleimide reductase (EC 1.-.-.-) from Escherichia coli (365 aa) fasta scores%3B opt: 507%2C z-score: 566.6%2C E(): 4.3e-24%2C 31.6%25 identity in 380 aa overlap. Contains Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family.;gbkey=CDS;gene=mmyE;product=enoyl reductase%2C mmye;protein_id=NP_639840.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	234716	235795	.	+	.	ID=id10394;Dbxref=GeneID:1095313;Note=Pfam match to entry PF00724 oxidored_FMN%2C NADH:flavin oxidoreductase / NADH oxidase family%2C score 250.80%2C E-value 1.8e-71;gbkey=misc_feature;gene=mmyE
NC_003903.1	RefSeq	ribosome_entry_site	236401	236405	.	+	.	ID=id10395;gbkey=RBS
NC_003903.1	RefSeq	gene	236410	237429	.	+	.	ID=gene8143;Dbxref=GeneID:1095314;Name=mmyD;gbkey=Gene;gene=mmyD;gene_biotype=protein_coding;locus_tag=SCP1.233
NC_003903.1	RefSeq	CDS	236410	237429	.	+	0	ID=cds7997;Parent=gene8143;Dbxref=Genbank:NP_639841.1,GeneID:1095314;Name=NP_639841.1;Note=mmyD%2C hypothetical protein%2C len: 339aa%3B previously sequenced and annotated as TR:Q9JN80 (EMBL:AJ276673). Similar to TR:Q52426 (EMBL:L11334) AvrD%2C avirulence protein from Pseudomonas syringae (311 aa) fasta scores%3B opt: 253%2C z-score: 309.5%2C E(): 9e-10%2C 31.4%25 identity in 334 aa overlap.;gbkey=CDS;gene=mmyD;product=hypothetical protein;protein_id=NP_639841.1;transl_table=11
NC_003903.1	RefSeq	gene	237541	238245	.	+	.	ID=gene8144;Dbxref=GeneID:1095315;Name=mmyX;gbkey=Gene;gene=mmyX;gene_biotype=protein_coding;locus_tag=SCP1.233A
NC_003903.1	RefSeq	CDS	237541	238245	.	+	0	ID=cds7998;Parent=gene8144;Dbxref=Genbank:NP_639842.1,GeneID:1095315;Name=NP_639842.1;Note=mmyX%2C possible ATP/GTP-binding protein%2C len: 234aa%3B previously sequenced and annotated as TR:Q9JN81 (EMBL:AJ276673). Also similar to neighbouring CDS SCP1.236 MmyK%2C  ATP/GTP-binding protein (206 aa)(previously sequenced as TR:Q9JN85 (EMBL:AJ276673) hypothetical protein) fasta scores%3B opt: 538%2C z-score: 647.7%2C E(): 1.3e-28%2C 42.7%25 identity in 199 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=mmyX;product=atp/GTP-binding protein%2C mmyx;protein_id=NP_639842.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	237559	237582	.	+	.	ID=id10396;Dbxref=GeneID:1095315;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=mmyX
NC_003903.1	RefSeq	gene	238242	239240	.	+	.	ID=gene8145;Dbxref=GeneID:1095316;Name=mmyC;gbkey=Gene;gene=mmyC;gene_biotype=protein_coding;locus_tag=SCP1.233B
NC_003903.1	RefSeq	CDS	238242	239240	.	+	0	ID=cds7999;Parent=gene8145;Dbxref=Genbank:NP_639843.1,GeneID:1095316;Name=NP_639843.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;gene=mmyC;product=3-oxoacyl-ACP synthase III;protein_id=NP_639843.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	239292	239297	.	+	.	ID=id10397;gbkey=RBS
NC_003903.1	RefSeq	gene	239304	239552	.	+	.	ID=gene8146;Dbxref=GeneID:1095317;Name=mmyA;gbkey=Gene;gene=mmyA;gene_biotype=protein_coding;locus_tag=SCP1.234
NC_003903.1	RefSeq	CDS	239304	239552	.	+	0	ID=cds8000;Parent=gene8146;Dbxref=Genbank:NP_639844.1,GeneID:1095317;Name=NP_639844.1;Note=mmyA%2C possible acyl carrier protein%2C len: 82aa%3B previously sequenced and annotated as hypothetical protein TR:Q9JN83 (EMBL:AJ276673). Similar to many acyl carrier proteins eg. TR:Q54497 (EMBL:AJ224512) acyl carrier protein from Streptomyces nogalater (86 aa) fasta scores%3B opt: 146%2C z-score: 218.3%2C E(): 0.00011%2C 41.0%25 identity in 78 aa overlap. Contains Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site.;gbkey=CDS;gene=mmyA;product=acyl carrier protein%2C mmya;protein_id=NP_639844.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	239322	239522	.	+	.	ID=id10398;Dbxref=GeneID:1095317;Note=Pfam match to entry PF00550 pp-binding%2C Phosphopantetheine attachment site%2C score 37.10%2C E-value 1.3e-08;gbkey=misc_feature;gene=mmyA
NC_003903.1	RefSeq	stem_loop	239593	239637	.	+	.	ID=id10399;Note=Score 51: 17/17 (100%25) matches%2C 0 gaps%2C 11 base loop;gbkey=stem_loop
NC_003903.1	RefSeq	ribosome_entry_site	239667	239671	.	+	.	ID=id10400;gbkey=RBS
NC_003903.1	RefSeq	gene	239676	240374	.	+	.	ID=gene8147;Dbxref=GeneID:1095318;Name=mmyP;gbkey=Gene;gene=mmyP;gene_biotype=protein_coding;locus_tag=SCP1.235
NC_003903.1	RefSeq	CDS	239676	240374	.	+	0	ID=cds8001;Parent=gene8147;Dbxref=Genbank:NP_639845.1,GeneID:1095318;Name=NP_639845.1;Note=mmyP%2C hypothetical protein%2C len: 232aa%3B previously sequenced and annotated as TR:Q9JN84 (EMBL:AJ276673). Also similar to neighbouring CDS SCP1.245 mmfP (previously sequenced as TR:Q9JN92 (EMBL:AJ276673)) fasta scores%3B opt: 453%2C z-score: 556.3%2C E(): 1.6e-23%2C 38.9%25 identity in 234 aa overlap.;gbkey=CDS;gene=mmyP;product=hypothetical protein;protein_id=NP_639845.1;transl_table=11
NC_003903.1	RefSeq	gene	240371	240991	.	+	.	ID=gene8148;Dbxref=GeneID:1095319;Name=mmyK;gbkey=Gene;gene=mmyK;gene_biotype=protein_coding;locus_tag=SCP1.236
NC_003903.1	RefSeq	CDS	240371	240991	.	+	0	ID=cds8002;Parent=gene8148;Dbxref=Genbank:NP_639846.1,GeneID:1095319;Name=NP_639846.1;Note=mmyK%2C possible ATP/GTP-binding protein%2C len: 206aa%3B previously sequenced and annotated as TR:Q9JN85 (EMBL:AJ276673). Also similar to neighbouring CDS SCP1.233A MmyX%2C  ATP/GTP-binding protein (234 aa) (previously sequenced as TR:Q9JN81 (EMBL:AJ276673) hypothetical protein) fasta scores%3B opt: 538%2C z-score: 647.7%2C E(): 1.3e-28%2C 42.7%25 identity in 199 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;gene=mmyK;product=atp/GTP-binding protein%2C mmyk;protein_id=NP_639846.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	240407	240430	.	+	.	ID=id10401;Dbxref=GeneID:1095319;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature;gene=mmyK
NC_003903.1	RefSeq	gene	241054	242481	.	-	.	ID=gene8149;Dbxref=GeneID:1095320;Name=mmr;gbkey=Gene;gene=mmr;gene_biotype=protein_coding;locus_tag=SCP1.237c
NC_003903.1	RefSeq	CDS	241054	242481	.	-	0	ID=cds8003;Parent=gene8149;Dbxref=Genbank:NP_639847.1,GeneID:1095320;Name=NP_639847.1;Note=mmr%2C methylenomycin A resistance protein%2C len: 475aa%3B previously sequenced and annotated as hypothetical protein SW:P11545 (MMR_STRCO) (EMBL:AJ276673). Similar to many others eg. SW:P39886 (TCMA_STRGA) tetracenomycin C resistance and export protein from Streptomyces glaucescens (538 aa) fasta scores%3B opt: 797%2C z-score: 882.3%2C E(): 0%2C 32.7%25 identity in 425 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;gene=mmr;product=methylenomycin a resistance protein%2C mmr;protein_id=NP_639847.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	242491	242495	.	-	.	ID=id10402;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	242683	242688	.	+	.	ID=id10403;gbkey=RBS
NC_003903.1	RefSeq	gene	242698	243033	.	+	.	ID=gene8150;Dbxref=GeneID:1095321;Name=mmyJ;gbkey=Gene;gene=mmyJ;gene_biotype=protein_coding;locus_tag=SCP1.238
NC_003903.1	RefSeq	CDS	242698	243033	.	+	0	ID=cds8004;Parent=gene8150;Dbxref=Genbank:NP_639848.1,GeneID:1095321;Name=NP_639848.1;Note=mmyJ%2C hypothetical protein%2C len: 111aa%3B previously sequenced and annotated as TR:Q52517 (EMBL:AJ276673). Similar to many others eg. TR:O31480 (EMBL:Z99106) hypothetical protein from Bacillus subtilis (104 aa) fasta scores%3B opt: 279%2C z-score: 375.5%2C E(): 1.9e-13%2C 45.4%25 identity in 97 aa overlap.;gbkey=CDS;gene=mmyJ;product=hypothetical protein;protein_id=NP_639848.1;transl_table=11
NC_003903.1	RefSeq	gene	242996	244177	.	-	.	ID=gene8151;Dbxref=GeneID:1095322;Name=mmyG;gbkey=Gene;gene=mmyG;gene_biotype=protein_coding;locus_tag=SCP1.239c
NC_003903.1	RefSeq	CDS	242996	244177	.	-	0	ID=cds8005;Parent=gene8151;Dbxref=Genbank:NP_639849.1,GeneID:1095322;Name=NP_639849.1;Note=mmyG%2C possible oxidoreductase%2C len: 393aa%3B previously sequenced and annotated as TR:Q9JN86 (EMBL:AJ276673). Similar to many eg. TR:Q9RK99 (EMBL:AL117322)  oxidoreductase from Streptomyces coelicolor (371 aa) fasta scores%3B opt: 675%2C z-score: 754.9%2C E(): 0%2C 36.4%25 identity in 357 aa overlap. Contains Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family.;gbkey=CDS;gene=mmyG;product=oxidoreductase%2C mmyg;protein_id=NP_639849.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	243377	244162	.	-	.	ID=id10404;Dbxref=GeneID:1095322;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2C Oxidoreductase family%2C score 134.40%2C E-value 2.1e-36;gbkey=misc_feature;gene=mmyG
NC_003903.1	RefSeq	ribosome_entry_site	244193	244196	.	-	.	ID=id10405;gbkey=RBS
NC_003903.1	RefSeq	gene	244260	245381	.	-	.	ID=gene8152;Dbxref=GeneID:1095323;Name=mmyO;gbkey=Gene;gene=mmyO;gene_biotype=protein_coding;locus_tag=SCP1.240c
NC_003903.1	RefSeq	CDS	244260	245381	.	-	0	ID=cds8006;Parent=gene8152;Dbxref=Genbank:NP_639850.1,GeneID:1095323;Name=NP_639850.1;Note=mmyO%2C possible monooxygenase%2C len: 373aa%3B previously sequenced and annotated as  alkanal monooxygenase TR:Q9JN87 (EMBL:AJ276673). Similar to weakly similar to SW:P07740 (LUXA_VIBHA) alkanal monooxygenase alpha chain (EC 1.14.14.3) from Vibrio harveyi (355 aa) fasta scores%3B opt: 215%2C z-score: 254.6%2C E(): 1e-06%2C 22.1%25 identity in 272 aa overlap. Contains Pfam match to entry PF00296 bac_luciferase%2C Bacterial luciferase.;gbkey=CDS;gene=mmyO;product=monooxygenase%2C mmyo;protein_id=NP_639850.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	244983	245294	.	-	.	ID=id10406;Dbxref=GeneID:1095323;Note=Pfam match to entry PF00296 bac_luciferase%2C Bacterial luciferase%2C score 11.30%2C E-value 0.0048;gbkey=misc_feature;gene=mmyO
NC_003903.1	RefSeq	ribosome_entry_site	245388	245393	.	-	.	ID=id10407;gbkey=RBS
NC_003903.1	RefSeq	gene	245412	246221	.	-	.	ID=gene8153;Dbxref=GeneID:1095324;Name=mmyT;gbkey=Gene;gene=mmyT;gene_biotype=protein_coding;locus_tag=SCP1.241c
NC_003903.1	RefSeq	CDS	245412	246221	.	-	0	ID=cds8007;Parent=gene8153;Dbxref=Genbank:NP_639851.1,GeneID:1095324;Name=NP_639851.1;Note=mmyT%2C possible thioesterase%2C len: 269aa%3B previously sequenced and annotated as TR:Q9JN88 (EMBL:AJ276673) - note difference in predicted translational start site. Similar to many others eg. SW:P14686 (GRST_BACBR) gramicidin S biosynthesis GrsT protein (EC 3.1.2.-) from Bacillus brevis (256 aa) fasta scores%3B opt: 289%2C z-score: 338.3%2C E(): 2.2e-11%2C 29.7%25 identity in 256 aa overlap. Contains Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain;gbkey=CDS;gene=mmyT;product=thioesterase%2C mmyt;protein_id=NP_639851.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	245475	246221	.	-	.	ID=id10408;Dbxref=GeneID:1095324;Note=Pfam match to entry PF00975 Thioesterase%2C Thioesterase domain%2C score 79.40%2C E-value 7.3e-20;gbkey=misc_feature;gene=mmyT
NC_003903.1	RefSeq	ribosome_entry_site	246236	246239	.	-	.	ID=id10409;gbkey=RBS
NC_003903.1	RefSeq	gene	246362	247006	.	-	.	ID=gene8154;Dbxref=GeneID:1095325;Name=mmfR;gbkey=Gene;gene=mmfR;gene_biotype=protein_coding;locus_tag=SCP1.242c
NC_003903.1	RefSeq	CDS	246362	247006	.	-	0	ID=cds8008;Parent=gene8154;Dbxref=Genbank:NP_639852.1,GeneID:1095325;Name=NP_639852.1;Note=mmfR%2C possible lactone-dependent transcriptional regulator (TetR-family)%2C len: 214aa%3B previously sequenced and annotated as hypothetical protein TR:Q9JN89 (EMBL:AJ276673). Similar to many lactone-dependent transcriptional regulators eg. TR:Q54189 (EMBL:D49782) A-factor receptor from Streptomyces griseus (276 aa) fasta scores%3B opt: 342%2C z-score: 422.0%2C E(): 4.9e-16%2C 33.0%25 identity in 182 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and helix-turn-helix motif at residue 50-71 (Score 1532 (+4.40 SD)).;gbkey=CDS;gene=mmfR;product=TetR family transcriptional regulator;protein_id=NP_639852.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	246767	246907	.	-	.	ID=id10410;Dbxref=GeneID:1095325;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 76.30%2C E-value 6.5e-19;gbkey=misc_feature;gene=mmfR
NC_003903.1	RefSeq	ribosome_entry_site	247013	247019	.	-	.	ID=id10411;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	247184	247189	.	+	.	ID=id10412;gbkey=RBS
NC_003903.1	RefSeq	gene	247201	248262	.	+	.	ID=gene8155;Dbxref=GeneID:1095326;Name=mmfL;gbkey=Gene;gene=mmfL;gene_biotype=protein_coding;locus_tag=SCP1.243
NC_003903.1	RefSeq	CDS	247201	248262	.	+	0	ID=cds8009;Parent=gene8155;Dbxref=Genbank:NP_639853.1,GeneID:1095326;Name=NP_639853.1;Note=mmfL%2C possible lactone biosynthesis protein%2C len: 353aa%3B previously sequenced and annotated as hypothetical protein TR:Q9JN90 (EMBL:AJ276673). Similar to many others eg. TR:O86851 (EMBL:AJ007731) ScbA gamma-butyrolactone biosynthesis protein from Streptomyces coelicolor (314 aa) fasta scores%3B opt: 336%2C z-score: 389.2%2C E(): 3.3e-14%2C 28.7%25 identity in 310 aa overlap. Contains a TTA encoded leucine at residue 8%2C possible target for bldA regulation.;gbkey=CDS;gene=mmfL;product=lactone biosynthesis protein%2C mmfl;protein_id=NP_639853.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	247222	247224	.	+	.	ID=id10413;Dbxref=GeneID:1095326;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature;gene=mmfL
NC_003903.1	RefSeq	ribosome_entry_site	248250	248254	.	+	.	ID=id10414;Dbxref=GeneID:1095326;gbkey=RBS;gene=mmfL
NC_003903.1	RefSeq	gene	248259	249461	.	+	.	ID=gene8156;Dbxref=GeneID:1095327;Name=mmfH;gbkey=Gene;gene=mmfH;gene_biotype=protein_coding;locus_tag=SCP1.244
NC_003903.1	RefSeq	CDS	248259	249461	.	+	0	ID=cds8010;Parent=gene8156;Dbxref=Genbank:NP_639854.1,GeneID:1095327;Name=NP_639854.1;Note=mmfH%2C possible oxidoreductase%2C len: 400aa%3B previously sequenced and annotated as hypothetical protein TR:Q9JN91 (EMBL:AJ276673). similar to many possible oxidoreductases eg. TR:O68921 (EMBL:AF058302)  enoyl reductase%2C FrnT from polyketide antibiotic frenolicin biosynthetic cluster of Streptomyces roseofulvus (396 aa) fasta scores%3B opt: 867%2C z-score: 921.4%2C E(): 0%2C 48.0%25 identity in 329 aa overlap.;gbkey=CDS;gene=mmfH;product=oxidoreductase%2C mmfh;protein_id=NP_639854.1;transl_table=11
NC_003903.1	RefSeq	gene	249458	250255	.	+	.	ID=gene8157;Dbxref=GeneID:1095328;Name=mmfP;gbkey=Gene;gene=mmfP;gene_biotype=protein_coding;locus_tag=SCP1.245
NC_003903.1	RefSeq	CDS	249458	250255	.	+	0	ID=cds8011;Parent=gene8157;Dbxref=Genbank:NP_639855.1,GeneID:1095328;Name=NP_639855.1;Note=mmfP%2C hypothetical protein%2C len: 265aa%3B previously sequenced and annotated as TR:Q9JN92 (EMBL:AJ276673). Similar to SW:O33611 (IMD_STRCN) inhibition of morphological differentiation protein from Streptomyces cyaneus (Streptomyces curacoi) (277 aa) fasta scores%3B opt: 329%2C z-score: 384.0%2C E(): 6.4e-14%2C 32.0%25 identity in 225 aa overlap. Also similar to neighbouring CDS SCP1.235 mmyP (previously sequenced as TR:Q9JN84 (EMBL:AJ276673)) fasta scores%3B opt: 453%2C z-score: 556.3%2C E(): 1.6e-23%2C 38.9%25 identity in 234 aa overlap.;gbkey=CDS;gene=mmfP;product=hypothetical protein;protein_id=NP_639855.1;transl_table=11
NC_003903.1	RefSeq	gene	250406	251017	.	+	.	ID=gene8158;Dbxref=GeneID:1095329;Name=mmyR;gbkey=Gene;gene=mmyR;gene_biotype=protein_coding;locus_tag=SCP1.246
NC_003903.1	RefSeq	CDS	250406	251017	.	+	0	ID=cds8012;Parent=gene8158;Dbxref=Genbank:NP_639856.1,GeneID:1095329;Name=NP_639856.1;Note=mmyR%2C possible lactone-dependent transcriptional regulator (TetR-family)%2C len: 203aa%3B previously sequenced and annotated as hypothetical protein TR:Q9JN93 (EMBL:AJ276673). Weakly similar to many lactone-dependent transcriptional regulators eg. CprS protein from Streptomyces coelicolor (215 aa) fasta scores%3B opt: 240%2C z-score: 299.2%2C E(): 3.3e-09%2C 26.9%25 identity in 193 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family and helix-turn-helix motif at residue 29-50 (Score 1129 (+3.03 SD)).;gbkey=CDS;gene=mmyR;product=TetR family transcriptional regulator;protein_id=NP_639856.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	250442	250582	.	+	.	ID=id10415;Dbxref=GeneID:1095329;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 63.30%2C E-value 5.4e-15;gbkey=misc_feature;gene=mmyR
NC_003903.1	RefSeq	gene	251127	251561	.	-	.	ID=gene8159;Dbxref=GeneID:1095330;Name=SCP1.247c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.247c
NC_003903.1	RefSeq	CDS	251127	251561	.	-	0	ID=cds8013;Parent=gene8159;Dbxref=Genbank:NP_639857.1,GeneID:1095330;Name=NP_639857.1;Note=unknown%2C len: 144aa%3B similar to TR:Q9RJS4 (EMBL:AL132707) hypothetical protein from Streptomyces coelicolor (127 aa) fasta scores%3B opt:  229%2C z-score: 300.2%2C E():  3e-09%2C 37.3%25 identity in 110 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639857.1;transl_table=11
NC_003903.1	RefSeq	gene	251565	251804	.	-	.	ID=gene8160;Dbxref=GeneID:1095331;Name=SCP1.248c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.248c
NC_003903.1	RefSeq	CDS	251565	251804	.	-	0	ID=cds8014;Parent=gene8160;Dbxref=Genbank:NP_639858.1,GeneID:1095331;Name=NP_639858.1;Note=unknown%2C len: 79aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639858.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	251570	251574	.	-	.	ID=id10416;Dbxref=GeneID:1095331;gbkey=RBS
NC_003903.1	RefSeq	gene	251995	252324	.	-	.	ID=gene8161;Dbxref=GeneID:1095332;Name=SCP1.249c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.249c
NC_003903.1	RefSeq	CDS	251995	252324	.	-	0	ID=cds8015;Parent=gene8161;Dbxref=Genbank:NP_639859.1,GeneID:1095332;Name=NP_639859.1;Note=possible membrane protein%2C len: 109aa%3B contains possible membrane-spanning hydrophobic region.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639859.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	252335	252339	.	-	.	ID=id10417;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	252517	252521	.	+	.	ID=id10418;gbkey=RBS
NC_003903.1	RefSeq	gene	252528	252950	.	+	.	ID=gene8162;Dbxref=GeneID:1095333;Name=SCP1.250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.250
NC_003903.1	RefSeq	CDS	252528	252950	.	+	0	ID=cds8016;Parent=gene8162;Dbxref=Genbank:NP_639860.1,GeneID:1095333;Name=NP_639860.1;Note=unknown%2C len: 140aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639860.1;transl_table=11
NC_003903.1	RefSeq	gene	253207	253575	.	+	.	ID=gene8163;Dbxref=GeneID:1095334;Name=SCP1.251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.251
NC_003903.1	RefSeq	CDS	253207	253575	.	+	0	ID=cds8017;Parent=gene8163;Dbxref=Genbank:NP_639861.1,GeneID:1095334;Name=NP_639861.1;Note=unknown%2C len: 122aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639861.1;transl_table=11
NC_003903.1	RefSeq	gene	253719	254249	.	-	.	ID=gene8164;Dbxref=GeneID:1095335;Name=SCP1.252c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.252c
NC_003903.1	RefSeq	CDS	253719	254249	.	-	0	ID=cds8018;Parent=gene8164;Dbxref=Genbank:NP_639862.1,GeneID:1095335;Name=NP_639862.1;Note=unknown%2C len: 122176aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639862.1;transl_table=11
NC_003903.1	RefSeq	gene	254385	255002	.	+	.	ID=gene8165;Dbxref=GeneID:1095336;Name=SCP1.253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.253
NC_003903.1	RefSeq	CDS	254385	255002	.	+	0	ID=cds8019;Parent=gene8165;Dbxref=Genbank:NP_639863.1,GeneID:1095336;Name=NP_639863.1;Note=unknown%2C len: 205aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639863.1;transl_table=11
NC_003903.1	RefSeq	gene	255286	255909	.	-	.	ID=gene8166;Dbxref=GeneID:1095337;Name=SCP1.254c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.254c
NC_003903.1	RefSeq	CDS	255286	255909	.	-	0	ID=cds8020;Parent=gene8166;Dbxref=Genbank:NP_639864.1,GeneID:1095337;Name=NP_639864.1;Note=unknown%2C len: 207aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639864.1;transl_table=11
NC_003903.1	RefSeq	gene	255857	256288	.	-	.	ID=gene8167;Dbxref=GeneID:1095338;Name=SCP1.255c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.255c
NC_003903.1	RefSeq	CDS	255857	256288	.	-	0	ID=cds8021;Parent=gene8167;Dbxref=Genbank:NP_639865.1,GeneID:1095338;Name=NP_639865.1;Note=unknown%2C len: 205aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639865.1;transl_table=11
NC_003903.1	RefSeq	gene	256449	256613	.	-	.	ID=gene8168;Dbxref=GeneID:1095339;Name=SCP1.256c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.256c
NC_003903.1	RefSeq	CDS	256449	256613	.	-	0	ID=cds8022;Parent=gene8168;Dbxref=Genbank:NP_639866.1,GeneID:1095339;Name=NP_639866.1;Note=doubtful CDS%2C unknown%2C len: 54aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639866.1;transl_table=11
NC_003903.1	RefSeq	gene	256995	257408	.	+	.	ID=gene8169;Dbxref=GeneID:1095340;Name=SCP1.257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.257
NC_003903.1	RefSeq	CDS	256995	257408	.	+	0	ID=cds8023;Parent=gene8169;Dbxref=Genbank:NP_639867.1,GeneID:1095340;Name=NP_639867.1;Note=unknown%2C hydrophilic%2C len: 137aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639867.1;transl_table=11
NC_003903.1	RefSeq	gene	257545	258045	.	-	.	ID=gene8170;Dbxref=GeneID:1095341;Name=SCP1.258c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.258c
NC_003903.1	RefSeq	CDS	257545	258045	.	-	0	ID=cds8024;Parent=gene8170;Dbxref=Genbank:NP_639868.1,GeneID:1095341;Name=NP_639868.1;Note=unknown%2C alanine-rich%2C len: 166aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639868.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	258030	258061	.	+	.	ID=id10419;Note=Inverted repeat bounding possible transposon.;gbkey=repeat_region
NC_003903.1	RefSeq	gene	258163	259413	.	+	.	ID=gene8171;Dbxref=GeneID:1095342;Name=SCP1.259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.259
NC_003903.1	RefSeq	CDS	258163	259413	.	+	0	ID=cds8025;Parent=gene8171;Dbxref=Genbank:NP_639869.1,GeneID:1095342;Name=NP_639869.1;Note=probable transposon transposase%2C len: 416aa%3B similar to many eg. SW:P35883 (TRA0_MYCSM) transposase for insertion sequence element IS6120 from Mycobacterium smegmatis (323 aa) fasta scores%3B opt: 1474%2C z-score: 1699.7%2C E(): 0%2C 72.7%25 identity in 300 aa overlap and SW:Q52873 (TRA5_RHIME) transposase for insertion sequence element ISRM5 from Rhizobium meliloti (Sinorhizobium meliloti) (398 aa) fasta scores%3B opt: 411%2C z-score: 476.6%2C E(): 8.4e-20%2C 26.3%25 identity in 373 aa overlap. Contains Pfam match to entry PF00872 Transpo_mutator%2C Transposase%2C Mutator family and Prosite match to PS01007 Transposases%2C Mutator family%2C signature.;gbkey=CDS;product=transposon transposase;protein_id=NP_639869.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	258211	259326	.	+	.	ID=id10420;Dbxref=GeneID:1095342;Note=Pfam match to entry PF00872 Transpo_mutator%2C Transposase%2C Mutator family%2C score 310.40%2C E-value 2.1e-89;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	258883	258957	.	+	.	ID=id10421;Dbxref=GeneID:1095342;Note=PS01007 Transposases%2C Mutator family%2C signature;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	259420	259426	.	+	.	ID=id10422;gbkey=RBS
NC_003903.1	RefSeq	gene	259437	259787	.	+	.	ID=gene8172;Dbxref=GeneID:1095343;Name=SCP1.260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.260
NC_003903.1	RefSeq	CDS	259437	259787	.	+	0	ID=cds8026;Parent=gene8172;Dbxref=Genbank:NP_639870.1,GeneID:1095343;Name=NP_639870.1;Note=unknown%2C len: 116aa%3B lies within a possible transposon;gbkey=CDS;product=hypothetical protein;protein_id=NP_639870.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	259807	259838	.	+	.	ID=id10423;Note=Inverted repeat bounding possible transposon.;gbkey=repeat_region
NC_003903.1	RefSeq	gene	260052	260555	.	-	.	ID=gene8173;Dbxref=GeneID:1095344;Name=SCP1.261c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.261c
NC_003903.1	RefSeq	CDS	260052	260555	.	-	0	ID=cds8027;Parent=gene8173;Dbxref=Genbank:NP_639871.1,GeneID:1095344;Name=NP_639871.1;Note=possible secreted protein%2C len: 167aa%3B N-terminus strongly similar to that from TR:Q9S1W2 (EMBL:AL109950) hypothetical protein SCJ4.11 from Streptomyces coelicolor. Contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;product=secreted protein;protein_id=NP_639871.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	260565	260570	.	-	.	ID=id10424;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	260786	260790	.	+	.	ID=id10425;gbkey=RBS
NC_003903.1	RefSeq	gene	260796	261038	.	+	.	ID=gene8174;Dbxref=GeneID:1095345;Name=SCP1.262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.262
NC_003903.1	RefSeq	CDS	260796	261038	.	+	0	ID=cds8028;Parent=gene8174;Dbxref=Genbank:NP_639872.1,GeneID:1095345;Name=NP_639872.1;Note=unknown%2C len: 80aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639872.1;transl_table=11
NC_003903.1	RefSeq	gene	261236	261547	.	-	.	ID=gene8175;Dbxref=GeneID:1095346;Name=SCP1.263c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.263c
NC_003903.1	RefSeq	CDS	261236	261547	.	-	0	ID=cds8029;Parent=gene8175;Dbxref=Genbank:NP_639873.1,GeneID:1095346;Name=NP_639873.1;Note=possible membrane protein%2C len: 103aa%3B contains possible membrane-spanning hydrophobic region.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639873.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	261551	261554	.	-	.	ID=id10426;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	261672	261677	.	+	.	ID=id10427;gbkey=RBS
NC_003903.1	RefSeq	gene	261683	263065	.	+	.	ID=gene8176;Dbxref=GeneID:1095347;Name=SCP1.264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.264
NC_003903.1	RefSeq	CDS	261683	263065	.	+	0	ID=cds8030;Parent=gene8176;Dbxref=Genbank:NP_639874.1,GeneID:1095347;Name=NP_639874.1;Note=unknown%2C len: 460aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639874.1;transl_table=11
NC_003903.1	RefSeq	gene	263311	264000	.	-	.	ID=gene8177;Dbxref=GeneID:1095348;Name=SCP1.265c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.265c
NC_003903.1	RefSeq	CDS	263311	264000	.	-	0	ID=cds8031;Parent=gene8177;Dbxref=Genbank:NP_639875.1,GeneID:1095348;Name=NP_639875.1;Note=unknown%2C len: 229aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639875.1;transl_table=11
NC_003903.1	RefSeq	gene	264034	264486	.	-	.	ID=gene8178;Dbxref=GeneID:1095349;Name=SCP1.266c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.266c
NC_003903.1	RefSeq	CDS	264034	264486	.	-	0	ID=cds8032;Parent=gene8178;Dbxref=Genbank:NP_639876.1,GeneID:1095349;Name=NP_639876.1;Note=unknown%2C len: 150aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639876.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	264494	264499	.	-	.	ID=id10428;gbkey=RBS
NC_003903.1	RefSeq	repeat_region	264719	265454	.	+	.	ID=id10429;Note=Directly repeated at 29043..29778%2C overlaps with neighbouring repeat.;gbkey=repeat_region
NC_003903.1	RefSeq	repeat_region	264720	265446	.	+	.	ID=id10430;Note=Directly%2C imperfectly repeated at 29043..29778. Inverted and imperfectly repeated at complement(326246..326981).;gbkey=repeat_region
NC_003903.1	RefSeq	gene	264803	265462	.	+	.	ID=gene8179;Dbxref=GeneID:1095350;Name=SCP1.267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.267
NC_003903.1	RefSeq	CDS	264803	265462	.	+	0	ID=cds8033;Parent=gene8179;Dbxref=Genbank:NP_639877.1,GeneID:1095350;Name=NP_639877.1;Note=possible secreted protein%2C len: 219aa%3B similar to TR:Q9KY42 (EMBL:AL356892) hypothetical protein from Streptomyces coelicolor fasta scores%3B opt: 496%2C z-score: 616.3%2C E(): 8.7e-27%2C 44.7%25 identity in 197 aa overlap. Strongly similar to others on the same plasmid eg. SCP1.323c fasta scores%3B opt: 1190%2C z-score: 1292.7%2C E(): 0%2C 77.5%25 identity in 218 aa overlap%2C SCP1.31 fasta scores%3B opt: 1190%2C z-score: 1292.7%2C E(): 0%2C 77.5%25 identity in 218 aa overlap and C-terminus similar to immediately downstream CDS SCP1.268 fasta scores%3B opt: 468%2C z-score: 519.5%2C E(): 2e-24%2C 74.5%25 identity in 98 aa overlap. Contains a possible cleavable N-terminal signal sequence;gbkey=CDS;product=secreted protein;protein_id=NP_639877.1;transl_table=11
NC_003903.1	RefSeq	gene	265459	265794	.	+	.	ID=gene8180;Dbxref=GeneID:1095351;Name=SCP1.268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.268
NC_003903.1	RefSeq	CDS	265459	265794	.	+	0	ID=cds8034;Parent=gene8180;Dbxref=Genbank:NP_639878.1,GeneID:1095351;Name=NP_639878.1;Note=unknown%2C len: 111aa%3B strongly similar to the C-termini of others on the same plasmid eg. the immediately upstream CDS SCP1.267 (fasta scores%3B opt: 468%2C z-score: 578.4%2C E(): 1.1e-27%2C 74.5%25 identity in 98 aa overlap)%2C SCP1.36 (fasta scores%3B opt: 401%2C z-score: 496.6%2C E(): 3.9e-23%2C 57.4%25 identity in 108 aa overlap) and SCP1.490c (fasta scores%3B opt: 401%2C z-score: 496.6%2C E(): 3.9e-23%2C 57.4%25 identity in 108 aa overlap).;gbkey=CDS;product=hypothetical protein;protein_id=NP_639878.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	265491	265762	.	+	.	ID=id10431;Dbxref=GeneID:1095351;Note=Directly repeated at 29490..29757;gbkey=repeat_region
NC_003903.1	RefSeq	repeat_region	265494	265758	.	+	.	ID=id10432;Dbxref=GeneID:1095351;Note=Directly and imperfectly repeated at 29490..29757. Inverted and imperfectly repeated at complement(326267..326534).;gbkey=repeat_region
NC_003903.1	RefSeq	ribosome_entry_site	265821	265827	.	+	.	ID=id10433;gbkey=RBS
NC_003903.1	RefSeq	gene	265831	266202	.	+	.	ID=gene8181;Dbxref=GeneID:1095352;Name=SCP1.269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.269
NC_003903.1	RefSeq	CDS	265831	266202	.	+	0	ID=cds8035;Parent=gene8181;Dbxref=Genbank:NP_639879.1,GeneID:1095352;Name=NP_639879.1;Note=possible secreted protein%2C len: 123aa%3B contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;product=secreted protein;protein_id=NP_639879.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	266346	266349	.	+	.	ID=id10434;gbkey=RBS
NC_003903.1	RefSeq	gene	266354	266644	.	+	.	ID=gene8182;Dbxref=GeneID:1095353;Name=SCP1.270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.270
NC_003903.1	RefSeq	CDS	266354	266644	.	+	0	ID=cds8036;Parent=gene8182;Dbxref=Genbank:NP_639880.1,GeneID:1095353;Name=NP_639880.1;Note=unknown%2C doubtful CDS%2C len: 96aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639880.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	266707	266711	.	+	.	ID=id10435;gbkey=RBS
NC_003903.1	RefSeq	gene	266719	266880	.	+	.	ID=gene8183;Dbxref=GeneID:1095354;Name=SCP1.271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.271
NC_003903.1	RefSeq	CDS	266719	266880	.	+	0	ID=cds8037;Parent=gene8183;Dbxref=Genbank:NP_639881.1,GeneID:1095354;Name=NP_639881.1;Note=unknown%2C doubtful CDS%2C len: 53aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639881.1;transl_table=11
NC_003903.1	RefSeq	gene	266896	267342	.	-	.	ID=gene8184;Dbxref=GeneID:1095355;Name=SCP1.272c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.272c
NC_003903.1	RefSeq	CDS	266896	267342	.	-	0	ID=cds8038;Parent=gene8184;Dbxref=Genbank:NP_639882.1,GeneID:1095355;Name=NP_639882.1;Note=unknown%2C doubtful CDS%2C len: 148aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639882.1;transl_table=11
NC_003903.1	RefSeq	gene	267556	270675	.	-	.	ID=gene8185;Dbxref=GeneID:1095356;Name=SCP1.273c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.273c
NC_003903.1	RefSeq	CDS	267556	270675	.	-	0	ID=cds8039;Parent=gene8185;Dbxref=Genbank:NP_639883.1,GeneID:1095356;Name=NP_639883.1;Note=possible large secreted protein%2C len: 1039aa%3B similar to others eg. TR:Q9RKV7 (EMBL:AL132997)  serine/threonine protein kinase SC9G1.09 from Streptomyces coelicolor fasta scores: E(): 0%2C 32.4%25 id in 675 aa%2C and to SW:WAPA_BACSU (Q07833) wall-associated protein precursor WapA from Bacillus subtilis fasta scores: E(): 0.00021%2C 21.9%25 id in 1078 aa. Contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;product=large secreted protein;protein_id=NP_639883.1;transl_table=11
NC_003903.1	RefSeq	gene	271060	277308	.	+	.	ID=gene8186;Dbxref=GeneID:1095357;Name=SCP1.274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.274
NC_003903.1	RefSeq	CDS	271060	277308	.	+	0	ID=cds8040;Parent=gene8186;Dbxref=Genbank:NP_639884.1,GeneID:1095357;Name=NP_639884.1;Note=possible large secreted protein%2C len: 2082aa%3B similar to TR:O86585 (EMBL:AL031514) hypothetical protein SC2H4.02 from Streptomyces coelicolor (2183 aa) fasta scores: E(): 0%2C 38.4%25 id in 1958 aa. Contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;product=large secreted protein;protein_id=NP_639884.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	277518	280928	.	+	.	ID=id10436;Note=Previously sequenced as EMBL:AB042602. Contains insertion element IS466S which forms the junction between the integrated SCP1 and the chromosome in Streptomyces coelicolor strains%2C 2612 and A634.%3B label: AB042602;gbkey=misc_feature
NC_003903.1	RefSeq	gene	277758	278123	.	+	.	ID=gene8187;Dbxref=GeneID:1095358;Name=SCP1.275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.275
NC_003903.1	RefSeq	CDS	277758	278123	.	+	0	ID=cds8041;Parent=gene8187;Dbxref=Genbank:NP_639885.1,GeneID:1095358;Name=NP_639885.1;Note=unknown%2C doubtful CDS%2C len: 121aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639885.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	279098	279348	.	+	.	ID=id10437;Note=Previously sequenced as EMBL:S70703 {unusually long terminal inverted repeats} [Streptomyces coelicolor%2C plasmid SCP1%2C IS466%2C DNA Plasmid Insertion%2C 250 nt%2C segment 4 of 4]%3B label: S70703;gbkey=repeat_region
NC_003903.1	RefSeq	sequence_feature	279261	280901	.	+	.	ID=id10438;Note=Region identical to Streptomyces coelicolor EMBL entries AL133236%2C AJ245804 and AB032065.%3B label: AL133236;gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	279274	279310	.	+	.	ID=id10439;Note=Part of inverted repeat bounding insertion element IS466S;gbkey=repeat_region
NC_003903.1	RefSeq	sequence_feature	279310	280865	.	+	.	ID=id10440;Note=Insertion element IS466S;gbkey=misc_feature
NC_003903.1	RefSeq	gene	279323	280864	.	+	.	ID=gene8188;Dbxref=GeneID:1095359;Name=SCP1.276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.276
NC_003903.1	RefSeq	CDS	279323	280864	.	+	0	ID=cds8042;Parent=gene8188;Dbxref=Genbank:NP_639886.1,GeneID:1095359;Name=NP_639886.1;Note=Insertion element IS466S transposase%2C len: 513aa%3B found in both the Streptomyces coelicolor chromosome and SCP1 plasmid. Previously sequenced and annotated as TR:Q9R2U5 (EMBL:AL133236) IS466A OR IS466A-ORF OR tnpA OR IS469. Contains Pfam match to entry PF01610 Transposase_12%2C Transposase. Contains a TTA encoded leucine at residue 122%2C possible target for bldA regulation.;gbkey=CDS;product=insertion element is466s transposase;protein_id=NP_639886.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	279419	280360	.	+	.	ID=id10441;Dbxref=GeneID:1095359;Note=Pfam match to entry PF01610 Transposase_12%2C Transposase%2C score 56.40%2C E-value 6.2e-13;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	279686	279688	.	+	.	ID=id10442;Dbxref=GeneID:1095359;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	repeat_region	280709	280928	.	+	.	ID=id10443;Note=Previously sequenced as EMBL:S70701 {unusually long terminal inverted repeats} [Streptomyces coelicolor%2C plasmid SCP1%2C IS466%2C DNA Plasmid Insertion%2C 220 nt%2C segment 2 of 4]%3B label: S70701;gbkey=repeat_region
NC_003903.1	RefSeq	repeat_region	280865	280901	.	+	.	ID=id10444;Note=Part of inverted repeat bounding insertion element IS466S;gbkey=repeat_region
NC_003903.1	RefSeq	sequence_feature	280901	356023	.	+	.	ID=id10445;Note=Terminal inverted repeat.%3B label: TIR-R;gbkey=misc_feature
NC_003903.1	RefSeq	gene	280963	281178	.	+	.	ID=gene8189;Dbxref=GeneID:1095360;Name=SCP1.277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.277
NC_003903.1	RefSeq	CDS	280963	281178	.	+	0	ID=cds8043;Parent=gene8189;Dbxref=Genbank:NP_639887.1,GeneID:1095360;Name=NP_639887.1;Note=unknown%2C doubtful CDS%2C len: 71aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639887.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	281937	281940	.	+	.	ID=id10446;gbkey=RBS
NC_003903.1	RefSeq	gene	281951	282247	.	+	.	ID=gene8190;Dbxref=GeneID:1095361;Name=SCP1.278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.278
NC_003903.1	RefSeq	CDS	281951	282247	.	+	0	ID=cds8044;Parent=gene8190;Dbxref=Genbank:NP_639888.1,GeneID:1095361;Name=NP_639888.1;Note=unknown%2C len: 361aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639888.1;transl_table=11
NC_003903.1	RefSeq	gene	282655	283740	.	-	.	ID=gene8191;Dbxref=GeneID:1095362;Name=SCP1.279c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.279c
NC_003903.1	RefSeq	CDS	282655	283740	.	-	0	ID=cds8045;Parent=gene8191;Dbxref=Genbank:NP_639889.1,GeneID:1095362;Name=NP_639889.1;Note=unknown%2C len: 361aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639889.1;transl_table=11
NC_003903.1	RefSeq	gene	283966	285579	.	+	.	ID=gene8192;Dbxref=GeneID:1095363;Name=SCP1.280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.280
NC_003903.1	RefSeq	CDS	283966	285579	.	+	0	ID=cds8046;Parent=gene8192;Dbxref=Genbank:NP_639890.1,GeneID:1095363;Name=NP_639890.1;Note=unknown%2C len: 537aa%3B weakly similar to TR:Q9L0Y7 (EMBL:AL159139) hypothetical protein from Streptomyces coelicolor (475 aa) fasta scores%3B opt: 141%2C z-score: 161.2%2C E():  0.16%2C 26.0%25 identity in 407 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639890.1;transl_table=11
NC_003903.1	RefSeq	gene	285645	286310	.	+	.	ID=gene8193;Dbxref=GeneID:1095364;Name=SCP1.281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.281
NC_003903.1	RefSeq	CDS	285645	286310	.	+	0	ID=cds8047;Parent=gene8193;Dbxref=Genbank:NP_639891.1,GeneID:1095364;Name=NP_639891.1;Note=unknown%2C len: 115aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639891.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	286309	286313	.	+	.	ID=id10447;gbkey=RBS
NC_003903.1	RefSeq	gene	286320	286571	.	+	.	ID=gene8194;Dbxref=GeneID:1095365;Name=SCP1.282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.282
NC_003903.1	RefSeq	CDS	286320	286571	.	+	0	ID=cds8048;Parent=gene8194;Dbxref=Genbank:NP_639892.1,GeneID:1095365;Name=NP_639892.1;Note=unknown%2C len: 83aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639892.1;transl_table=11
NC_003903.1	RefSeq	gene	286639	286803	.	+	.	ID=gene8195;Dbxref=GeneID:1095366;Name=SCP1.283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.283
NC_003903.1	RefSeq	CDS	286639	286803	.	+	0	ID=cds8049;Parent=gene8195;Dbxref=Genbank:NP_639893.1,GeneID:1095366;Name=NP_639893.1;Note=doubtful CDS%2C unknown%2C len: 54aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639893.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	287143	287148	.	+	.	ID=id10448;gbkey=RBS
NC_003903.1	RefSeq	gene	287152	287499	.	+	.	ID=gene8196;Dbxref=GeneID:1095367;Name=SCP1.284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.284
NC_003903.1	RefSeq	CDS	287152	287499	.	+	0	ID=cds8050;Parent=gene8196;Dbxref=Genbank:NP_639894.1,GeneID:1095367;Name=NP_639894.1;Note=unknown%2C len: 115aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639894.1;transl_table=11
NC_003903.1	RefSeq	gene	287572	288471	.	-	.	ID=gene8197;Dbxref=GeneID:1095368;Name=SCP1.285c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.285c
NC_003903.1	RefSeq	CDS	287572	288471	.	-	0	ID=cds8051;Parent=gene8197;Dbxref=Genbank:NP_639895.1,GeneID:1095368;Name=NP_639895.1;Note=possible conserved secreted protein%2C len: 299aa%3B similar to many eg. TR:Q9XAF8 (EMBL:AL079356) hypothetical protein from Streptomyces coelicolor (365 aa) fasta scores%3B opt:  999%2C z-score: 1101.9%2C E(): 0%2C 52.8%25 identity in 303 aa overlap. Contains a possible cleavable N-terminal signal sequence;gbkey=CDS;product=hypothetical protein;protein_id=NP_639895.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	288805	288809	.	+	.	ID=id10449;gbkey=RBS
NC_003903.1	RefSeq	gene	288811	289065	.	+	.	ID=gene8198;Dbxref=GeneID:1095369;Name=SCP1.286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.286
NC_003903.1	RefSeq	CDS	288811	289065	.	+	0	ID=cds8052;Parent=gene8198;Dbxref=Genbank:NP_639896.1,GeneID:1095369;Name=NP_639896.1;Note=unknown%2C len: 84aa%3B similar to SCP1.225 hypothetical protein (previously sequenced as TR:Q9JN71 (EMBL:AJ276673)) from this plasmid  fasta scores: E(): 1.1%2C 40.7%25 id in 81 aa.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639896.1;transl_table=11
NC_003903.1	RefSeq	gene	289068	289436	.	+	.	ID=gene8199;Dbxref=GeneID:1095370;Name=SCP1.287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.287
NC_003903.1	RefSeq	CDS	289068	289436	.	+	0	ID=cds8053;Parent=gene8199;Dbxref=Genbank:NP_639897.1,GeneID:1095370;Name=NP_639897.1;Note=unknown%2C len: 122aa%3B weakly similar to TR:Q9KXJ3 (EMBL:AL357591) hypothetical protein from Streptomyces coelicolor (128 aa) fasta scores%3B opt: 102%2C z-score: 146.2%2C E(): 1.1%2C 26.7%25 identity in 120 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639897.1;transl_table=11
NC_003903.1	RefSeq	gene	289447	292125	.	-	.	ID=gene8200;Dbxref=GeneID:1095371;Name=SCP1.288c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.288c
NC_003903.1	RefSeq	CDS	289447	292125	.	-	0	ID=cds8054;Parent=gene8200;Dbxref=Genbank:NP_639898.1,GeneID:1095371;Name=NP_639898.1;Note=possible ATP/GTP-binding protein%2C len: 892aa%3B contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639898.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	291907	291930	.	-	.	ID=id10450;Dbxref=GeneID:1095371;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	292132	292136	.	-	.	ID=id10451;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	292312	292316	.	+	.	ID=id10452;gbkey=RBS
NC_003903.1	RefSeq	gene	292322	292597	.	+	.	ID=gene8201;Dbxref=GeneID:1095372;Name=SCP1.289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.289
NC_003903.1	RefSeq	CDS	292322	292597	.	+	0	ID=cds8055;Parent=gene8201;Dbxref=Genbank:NP_639899.1,GeneID:1095372;Name=NP_639899.1;Note=unknown%2C len: 91aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639899.1;transl_table=11
NC_003903.1	RefSeq	gene	292561	294369	.	-	.	ID=gene8202;Dbxref=GeneID:1095373;Name=SCP1.290c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.290c
NC_003903.1	RefSeq	CDS	292561	294369	.	-	0	ID=cds8056;Parent=gene8202;Dbxref=Genbank:NP_639900.1,GeneID:1095373;Name=NP_639900.1;Note=possible ATP/GTP-binding protein%2C len: 602aa%3B weakly similar to others from plasmids eg. TR:Q9XAX4 (EMBL:U88088) hypothetical protein from plasmid pRA2 of Pseudomonas alcaligenes (522 aa) fasta scores%3B opt: 263%2C z-score: 287.6%2C E(): 1.5e-08%2C 22.9%25 identity in 498 aa overlap. Contains Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=CDS;product=atp/GTP-binding protein;protein_id=NP_639900.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	294241	294264	.	-	.	ID=id10453;Dbxref=GeneID:1095373;Note=PS00017 ATP/GTP-binding site motif A (P-loop);gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	294384	294387	.	-	.	ID=id10454;gbkey=RBS
NC_003903.1	RefSeq	gene	294467	294880	.	-	.	ID=gene8203;Dbxref=GeneID:1095374;Name=SCP1.291c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.291c
NC_003903.1	RefSeq	CDS	294467	294880	.	-	0	ID=cds8057;Parent=gene8203;Dbxref=Genbank:NP_639901.1,GeneID:1095374;Name=NP_639901.1;Note=unknown%2C len: 137aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639901.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	294884	294889	.	-	.	ID=id10455;gbkey=RBS
NC_003903.1	RefSeq	gene	295281	295505	.	-	.	ID=gene8204;Dbxref=GeneID:1095375;Name=SCP1.292c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.292c
NC_003903.1	RefSeq	CDS	295281	295505	.	-	0	ID=cds8058;Parent=gene8204;Dbxref=Genbank:NP_639902.1,GeneID:1095375;Name=NP_639902.1;Note=possible regulatory protein%2C len: 74aa%3B similar to many eg. TR:Q53896 (EMBL:X60316) AbaA pleiotropic regulatory protein from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 149%2C z-score: 226.2%2C E(): 3.9e-05%2C 40.4%25 identity in 57 aa overlap and TR:Q9RHR6 (EMBL:AB025200) ORF76 protein from plasmid pNO33 of Streptomyces albulus (76 aa) fasta scores%3B opt: 309%2C z-score: 448.7%2C E(): 1.6e-17%2C 60.3%25 identity in 73 aa overlap.;gbkey=CDS;product=regulatory protein;protein_id=NP_639902.1;transl_table=11
NC_003903.1	RefSeq	gene	295502	296374	.	-	.	ID=gene8205;Dbxref=GeneID:1095376;Name=SCP1.293c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.293c
NC_003903.1	RefSeq	CDS	295502	296374	.	-	0	ID=cds8059;Parent=gene8205;Dbxref=Genbank:NP_639903.1,GeneID:1095376;Name=NP_639903.1;Note=possible conserved DNA-binding protein%2C len: 290aa%3B similar to many from streptomycetes eg. TR:Q9RHR7 (EMBL:AB025200) ORF312 protein from plasmid pNO33 of Streptomyces albulus (285 aa) fasta scores%3B opt: 857%2C z-score: 1027.5%2C E(): 0%2C and TR:CAB88448 (EMBL:AL353815)  DNA-binding protein from Streptomyces coelicolor (295 aa) fasta scores%3B opt: 706%2C z-score: 847.4%2C E(): 0%2C 40.8%25 identity in 282 aa overlap. Contains Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix.;gbkey=CDS;product=DNA-binding protein;protein_id=NP_639903.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	295513	295518	.	-	.	ID=id10456;Dbxref=GeneID:1095376;gbkey=RBS
NC_003903.1	RefSeq	sequence_feature	296159	296329	.	-	.	ID=id10457;Dbxref=GeneID:1095376;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 20.70%2C E-value 0.034;gbkey=misc_feature
NC_003903.1	RefSeq	promoter	296559	296560	.	+	.	ID=id10458;Note=transcriptional start site;gbkey=promoter
NC_003903.1	RefSeq	ribosome_entry_site	296618	296621	.	+	.	ID=id10459;gbkey=RBS
NC_003903.1	RefSeq	gene	296628	297104	.	+	.	ID=gene8206;Dbxref=GeneID:1095377;Name=SCP1.294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.294
NC_003903.1	RefSeq	CDS	296628	297104	.	+	0	ID=cds8060;Parent=gene8206;Dbxref=Genbank:NP_639904.1,GeneID:1095377;Name=NP_639904.1;Note=unknown%2C len: 145aa%3B similar to regions of others of undefined function eg. TR:Q9ZBJ0 (EMBL:AL035161) conserved hypothetical protein from Streptomyces coelicolor (860 aa) fasta scores%3B opt: 272%2C z-score: 347.5%2C E(): 6.9e-12%2C 39.4%25 identity in 127 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639904.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	297109	297112	.	+	.	ID=id10460;gbkey=RBS
NC_003903.1	RefSeq	gene	297122	297565	.	+	.	ID=gene8207;Dbxref=GeneID:1095378;Name=SCP1.295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.295
NC_003903.1	RefSeq	CDS	297122	297565	.	+	0	ID=cds8061;Parent=gene8207;Dbxref=Genbank:NP_639905.1,GeneID:1095378;Name=NP_639905.1;Note=possible regulatory protein%2C len: 147aa%3B similar to others from Streptomyces coelicolor eg. TR:Q53897 (EMBL:X60316) AbaA pleiotropic regulatory protein from Streptomyces coelicolor (192 aa) fasta scores%3B opt: 112%2C z-score: 149.1%2C E():  0.77%2C 31.7%25 identity in 120 aa overlap. Contains TTA encoded leucine at residue 11%2C possible target for bldA regulation.;gbkey=CDS;product=regulatory protein;protein_id=NP_639905.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	297553	297557	.	+	.	ID=id10461;Dbxref=GeneID:1095378;gbkey=RBS
NC_003903.1	RefSeq	gene	297562	298101	.	+	.	ID=gene8208;Dbxref=GeneID:1095379;Name=SCP1.296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.296
NC_003903.1	RefSeq	CDS	297562	298101	.	+	0	ID=cds8062;Parent=gene8208;Dbxref=Genbank:NP_639906.1,GeneID:1095379;Name=NP_639906.1;Note=unknown%2C len: 179aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639906.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	298120	298124	.	+	.	ID=id10462;gbkey=RBS
NC_003903.1	RefSeq	gene	298131	298583	.	+	.	ID=gene8209;Dbxref=GeneID:1095380;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=SCP1.297
NC_003903.1	RefSeq	CDS	298131	298583	.	+	0	ID=cds8063;Parent=gene8209;Dbxref=Genbank:NP_639907.1,GeneID:1095380;Name=NP_639907.1;Note=spore associated protein%2C SapC%2C len: 150aa%3B similar to TR:Q9KYK7 (EMBL:AL356593)  secreted protein from Streptomyces coelicolor (155 aa) fasta scores%3B opt: 346%2C z-score: 450.7%2C E(): 1.2e-17%2C 40.5%25 identity in 131 aa overlap. Contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;gene=sapC;product=spore associated protein%2C sapc;protein_id=NP_639907.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	298571	298574	.	+	.	ID=id10463;Dbxref=GeneID:1095380;gbkey=RBS;gene=sapC
NC_003903.1	RefSeq	gene	298580	299404	.	+	.	ID=gene8210;Dbxref=GeneID:1095381;Name=SCP1.299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.299
NC_003903.1	RefSeq	CDS	298580	299404	.	+	0	ID=cds8064;Parent=gene8210;Dbxref=Genbank:NP_639908.1,GeneID:1095381;Name=NP_639908.1;Note=probable hydratase%2C len: 274aa%3B similar to many eg. SW:P77608 (MHPD_ECOLI) 2-keto-4-pentenoate hydratase (EC 4.2.1.-) from Escherichia coli (269 aa) fasta scores%3B opt: 420%2C z-score: 525.4%2C E(): 8.5e-22%2C 34.3%25 identity in 245 aa overlap. Contains Pfam match to entry PF01689 Hyratase_decarb%2C Hydratase/decarboxylase.;gbkey=CDS;product=hydratase;protein_id=NP_639908.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	298640	299293	.	+	.	ID=id10464;Dbxref=GeneID:1095381;Note=Pfam match to entry PF01689 Hyratase_decarb%2C Hydratase/decarboxylase%2C score 127.90%2C E-value 1.9e-34;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	299422	299425	.	+	.	ID=id10465;gbkey=RBS
NC_003903.1	RefSeq	gene	299431	300312	.	+	.	ID=gene8211;Dbxref=GeneID:1095382;Name=SCP1.300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.300
NC_003903.1	RefSeq	CDS	299431	300312	.	+	0	ID=cds8065;Parent=gene8211;Dbxref=Genbank:NP_639909.1,GeneID:1095382;Name=NP_639909.1;Note=catalyzes the formation of acetyl-CoA from acetalaldehyde;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=NP_639909.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	300296	300301	.	+	.	ID=id10466;Dbxref=GeneID:1095382;gbkey=RBS
NC_003903.1	RefSeq	gene	300309	301325	.	+	.	ID=gene8212;Dbxref=GeneID:1095383;Name=SCP1.301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.301
NC_003903.1	RefSeq	CDS	300309	301325	.	+	0	ID=cds8066;Parent=gene8212;Dbxref=Genbank:NP_639910.1,GeneID:1095383;Name=NP_639910.1;Note=catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid%3B involved in the degradation of phenylpropionate;gbkey=CDS;product=4-hydroxy-2-oxovalerate aldolase;protein_id=NP_639910.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	300342	301139	.	+	.	ID=id10467;Dbxref=GeneID:1095383;Note=Pfam match to entry PF00682 HMGL-like%2C HMGL-like%2C score 175.10%2C E-value 1.2e-48;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	301311	301314	.	+	.	ID=id10468;Dbxref=GeneID:1095383;gbkey=RBS
NC_003903.1	RefSeq	gene	301322	302185	.	+	.	ID=gene8213;Dbxref=GeneID:1095384;Name=SCP1.302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.302
NC_003903.1	RefSeq	CDS	301322	302185	.	+	0	ID=cds8067;Parent=gene8213;Dbxref=Genbank:NP_639911.1,GeneID:1095384;Name=NP_639911.1;Note=possible lysase%2C len: 287aa%3B similar to many eg. SW:P17725 (CILB_KLEPN) citrate lyase beta chain (EC 4.1.3.6) (289 aa) fasta scores%3B opt: 392%2C z-score: 446.6%2C E(): 2.1e-17%2C 31.5%25 identity in 286 aa overlap.;gbkey=CDS;product=lysase;protein_id=NP_639911.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	302170	302174	.	+	.	ID=id10469;Dbxref=GeneID:1095384;gbkey=RBS
NC_003903.1	RefSeq	gene	302182	302706	.	+	.	ID=gene8214;Dbxref=GeneID:1095385;Name=sapE;gbkey=Gene;gene=sapE;gene_biotype=protein_coding;locus_tag=SCP1.303
NC_003903.1	RefSeq	CDS	302182	302706	.	+	0	ID=cds8068;Parent=gene8214;Dbxref=Genbank:NP_639912.1,GeneID:1095385;Name=NP_639912.1;Note=spore associated protein%2C SapE%2C len: 174aa%3B similar to many of undefined function eg. TR:Q9ZC37 (EMBL:AL031866) hypothetical protein from Yersinia pestis (180 aa) fasta scores%3B opt:  490%2C z-score: 646.6%2C E(): 1.5e-28%2C 47.8%25 identity in 157 aa overlap. Contains Pfam match to entry PF01575 MaoC_dehydratas%2C MaoC like domain.;gbkey=CDS;gene=sapE;product=spore associated protein%2C sape;protein_id=NP_639912.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	302254	302619	.	+	.	ID=id10470;Dbxref=GeneID:1095385;Note=Pfam match to entry PF01575 MaoC_dehydratas%2C MaoC like domain%2C score 31.50%2C E-value 1.3e-05;gbkey=misc_feature;gene=sapE
NC_003903.1	RefSeq	ribosome_entry_site	302710	302716	.	+	.	ID=id10471;gbkey=RBS
NC_003903.1	RefSeq	gene	302723	303925	.	+	.	ID=gene8215;Dbxref=GeneID:1095386;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=SCP1.304
NC_003903.1	RefSeq	CDS	302723	303925	.	+	0	ID=cds8069;Parent=gene8215;Dbxref=Genbank:NP_639913.1,GeneID:1095386;Name=NP_639913.1;Note=spore associated protein%2C SapD%2C len: 296aa;gbkey=CDS;gene=sapD;product=spore associated protein%2C sapd;protein_id=NP_639913.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	304000	304003	.	+	.	ID=id10472;gbkey=RBS
NC_003903.1	RefSeq	gene	304016	304906	.	+	.	ID=gene8216;Dbxref=GeneID:1095387;Name=SCP1.305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.305
NC_003903.1	RefSeq	CDS	304016	304906	.	+	0	ID=cds8070;Parent=gene8216;Dbxref=Genbank:NP_639914.1,GeneID:1095387;Name=NP_639914.1;Note=unknown%2C len: 296aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639914.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	304938	304944	.	+	.	ID=id10473;gbkey=RBS
NC_003903.1	RefSeq	gene	304950	305606	.	+	.	ID=gene8217;Dbxref=GeneID:1095388;Name=SCP1.306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.306
NC_003903.1	RefSeq	CDS	304950	305606	.	+	0	ID=cds8071;Parent=gene8217;Dbxref=Genbank:NP_639915.1,GeneID:1095388;Name=NP_639915.1;Note=unknown%2C len: 218aa%3B N-terminal region weakly similar to many eg. SW:P71311 (YAIS_ECOLI) hypothetical protein from Escherichia coli (185 aa) fasta scores%3B opt:  221%2C z-score: 290.7%2C E():  1e-08%2C 28.7%25 identity in 164 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639915.1;transl_table=11
NC_003903.1	RefSeq	gene	305883	306293	.	-	.	ID=gene8218;Dbxref=GeneID:1095389;Name=SCP1.307c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.307c
NC_003903.1	RefSeq	CDS	305883	306293	.	-	0	ID=cds8072;Parent=gene8218;Dbxref=Genbank:NP_639916.1,GeneID:1095389;Name=NP_639916.1;Note=unknown%2C len: 136aa%3B similar to TR:Q9KY36 (EMBL:AL356892) hypothetical protein from Streptomyces coelicolor (111 aa) fasta scores%3B opt:  212%2C z-score: 263.6%2C E(): 3.3e-07%2C 37.0%25 identity in 108 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639916.1;transl_table=11
NC_003903.1	RefSeq	gene	308058	310078	.	+	.	ID=gene8219;Dbxref=GeneID:1095390;Name=SCP1.308;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SCP1.308;pseudo=true
NC_003903.1	RefSeq	sequence_feature	308058	310078	.	+	.	ID=id10474;Dbxref=GeneID:1095390;Note=pseudogene%2C unknown%2C len: 673aa%3B similar in regions to two hypothetical proteins found on plasmids - TR:O85873 (EMBL:AF079317) from plasmid pNL1 of Sphingomonas aromaticivorans (741 aa) fasta scores%3B opt: 310%2C z-score: 360.6%2C E(): 1.3e-12%2C 32.1%25 identity in 234 aa overlap and TR:Q9R6H6 (EMBL:AB016260) from plasmid pTi-SAKURA of Agrobacterium tumefaciens (716 aa) fasta scores%3B opt:  293%2C z-score: 341.1%2C E(): 1.6e-11%2C 32.9%25 identity in 222 aa overlap.;gbkey=misc_feature
NC_003903.1	RefSeq	stem_loop	310700	310776	.	-	.	ID=id10475;Note=Inverted repeat. Score 67: 29/34 ( 85%25) matches%2C 0 gaps%2C 9 base loop.;gbkey=stem_loop
NC_003903.1	RefSeq	gene	310923	312560	.	-	.	ID=gene8220;Dbxref=GeneID:1095391;Name=SCP1.309c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.309c
NC_003903.1	RefSeq	CDS	310923	312560	.	-	0	ID=cds8073;Parent=gene8220;Dbxref=Genbank:NP_639917.1,GeneID:1095391;Name=NP_639917.1;Note=possible integral membrane efflux protein%2C len: 545aa%3B similar to many eg. TR:Q9XE01 (EMBL:AB019519) VarS virginiamycin S resistance protein from Streptomyces virginiae (518 aa) fasta scores%3B opt: 1001%2C z-score: 1036.6%2C E(): 0%2C 36.8%25 identity in 522 aa overlap and TR:O54186 (EMBL:AL021411)  transport protein from Streptomyces coelicolor (533 aa) fasta scores%3B opt: 2830%2C z-score: 2920.7%2C E(): 0%2C 79.5%25 identity in 533 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=integral membrane efflux protein;protein_id=NP_639917.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	312565	312571	.	-	.	ID=id10476;gbkey=RBS
NC_003903.1	RefSeq	gene	312655	313671	.	-	.	ID=gene8221;Dbxref=GeneID:1095392;Name=SCP1.310c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.310c
NC_003903.1	RefSeq	CDS	312655	313671	.	-	0	ID=cds8074;Parent=gene8221;Dbxref=Genbank:NP_639918.1,GeneID:1095392;Name=NP_639918.1;Note=possible oxidoreductase%2C len: 338aa%3B similar to many eg. TR:Q9RJW9 (EMBL:AL133210)  reductase (fragment) from Streptomyces coelicolor (311 aa) fasta scores%3B opt: 795%2C z-score: 852.7%2C E(): 0%2C 44.0%25 identity in 293 aa overlap and SW:O82864 (AHPF_PSEPU) alkyl hydroperoxide reductase subunit from Pseudomonas putida (520 aa) fasta scores%3B opt: 301%2C z-score: 325.3%2C E(): 1.2e-10%2C 25.6%25 identity in 301 aa overlap.;gbkey=CDS;product=oxidoreductase;protein_id=NP_639918.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	313674	313679	.	-	.	ID=id10477;gbkey=RBS
NC_003903.1	RefSeq	gene	314274	315089	.	-	.	ID=gene8222;Dbxref=GeneID:1095393;Name=SCP1.311c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.311c
NC_003903.1	RefSeq	CDS	314274	315089	.	-	0	ID=cds8075;Parent=gene8222;Dbxref=Genbank:NP_639919.1,GeneID:1095393;Name=NP_639919.1;Note=possible short-chain oxidoreductase%2C len: 271aa%3B similar to many proposed oxidoreductase eg. SW:P37959 (YUSZ_BACSU) hypothetical oxidoreductase from Bacillus subtilis (280 aa) fasta scores%3B opt: 441%2C z-score: 502.6%2C E(): 1.6e-20%2C 33.6%25 identity in 274 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=CDS;product=short chain dehydrogenase;protein_id=NP_639919.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	314520	314543	.	-	.	ID=id10478;Dbxref=GeneID:1095393;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	314544	315074	.	-	.	ID=id10479;Dbxref=GeneID:1095393;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 210.30%2C E-value 3e-59;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	315097	315101	.	-	.	ID=id10480;gbkey=RBS
NC_003903.1	RefSeq	ribosome_entry_site	315256	315261	.	+	.	ID=id10481;gbkey=RBS
NC_003903.1	RefSeq	gene	315270	315917	.	+	.	ID=gene8223;Dbxref=GeneID:1095394;Name=SCP1.312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.312
NC_003903.1	RefSeq	CDS	315270	315917	.	+	0	ID=cds8076;Parent=gene8223;Dbxref=Genbank:NP_639920.1,GeneID:1095394;Name=NP_639920.1;Note=possible TetR-family regulator%2C len: 215aa%3B similar to many eg. TR:Q9L2D0 (EMBL:AL137187)  TetR-family transcriptional regulator from Streptomyces coelicolor (194 aa) fasta scores%3B opt: 317%2C z-score: 374.6%2C E(): 2.1e-13%2C 34.5%25 identity in 206 aa overlap. Contains Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family.;gbkey=CDS;product=TetR family regulatory protein;protein_id=NP_639920.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	315327	315467	.	+	.	ID=id10482;Dbxref=GeneID:1095394;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.40%2C E-value 4e-10;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	316806	316813	.	+	.	ID=id10483;gbkey=RBS
NC_003903.1	RefSeq	gene	316820	318055	.	+	.	ID=gene8224;Dbxref=GeneID:1095395;Name=SCP1.313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.313
NC_003903.1	RefSeq	CDS	316820	318055	.	+	0	ID=cds8077;Parent=gene8224;Dbxref=Genbank:NP_639921.1,GeneID:1095395;Name=NP_639921.1;Note=unknown%2C len: 411aa%3B weakly similar to many eg. TR:Q9L195 (EMBL:AL158057) hypothetical protein from Streptomyces coelicolor (437 aa) fasta scores%3B opt: 476%2C z-score: 570.6%2C E(): 2.6e-24%2C 32.7%25 identity in 327 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639921.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	318164	318853	.	-	.	ID=id10484;Note=Inverted repeat spanning region of non-coding DNA. Score 58: 22/24 ( 91%25) matches%2C 0 gaps. May be associated with the truncation of CDS SCP1.314.;gbkey=stem_loop
NC_003903.1	RefSeq	sequence_feature	318852	322974	.	-	.	ID=id10485;Note=Appears to be the remnant of an integrated transposon Tn4811. Region previously sequenced as EMBL:AF204735 Streptomyces coelicolor A3(2) plasmid SCP1 transposon Tn4811  NADP-dependent oxidoreductase and  regulator genes%2C complete cds%3B and unknown genes%3B label: AF204735;gbkey=misc_feature
NC_003903.1	RefSeq	gene	318859	319116	.	+	.	ID=gene8225;Dbxref=GeneID:1095396;Name=SCP1.314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.314;partial=true;start_range=.,318859
NC_003903.1	RefSeq	CDS	318859	319116	.	+	0	ID=cds8078;Parent=gene8225;Dbxref=Genbank:NP_639922.1,GeneID:1095396;Name=NP_639922.1;Note=unknown%2C partial CDS%2C len: 85aa%3B appears to have been truncated by an insertion/excision event. Previously sequenced as TR:Q9L8H3 (EMBL:AF204735). Also identical to the C-terminus of the larger TR:Q54402 (EMBL:Z11519) hypothetical protein from Streptomyces lividans (336 aa) fasta scores%3B opt:  472%2C z-score: 637.5%2C E(): 4.8e-28%2C 100.0%25 identity in 73 aa overlap.;gbkey=CDS;partial=true;product=hypothetical protein;protein_id=NP_639922.1;start_range=.,318859;transl_table=11
NC_003903.1	RefSeq	repeat_region	318881	320404	.	+	.	ID=id10486;Note=Inverted and (degenerately) repeated at 79749..81248. Inverted and (perfectly) repeated at complement(35620..37143).;gbkey=repeat_region
NC_003903.1	RefSeq	gene	319119	319538	.	+	.	ID=gene8226;Dbxref=GeneID:1095397;Name=SCP1.315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.315
NC_003903.1	RefSeq	CDS	319119	319538	.	+	0	ID=cds8079;Parent=gene8226;Dbxref=Genbank:NP_639923.1,GeneID:1095397;Name=NP_639923.1;Note=unknown%2C len: 139aa%3B previously sequenced as TR:Q9L8H2 (EMBL:AF204735). Strongly similar to TR:Q54403 (EMBL:Z11519) hypothetical protein from transposon Tn4811 of Streptomyces lividans (138 aa) fasta scores%3B opt:  858%2C z-score: 1093.1%2C E(): 0%2C 95.7%25 identity in 139 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639923.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	319598	319602	.	+	.	ID=id10487;gbkey=RBS
NC_003903.1	RefSeq	gene	319607	320569	.	+	.	ID=gene8227;Dbxref=GeneID:1095398;Name=SCP1.316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.316
NC_003903.1	RefSeq	CDS	319607	320569	.	+	0	ID=cds8080;Parent=gene8227;Dbxref=Genbank:NP_639924.1,GeneID:1095398;Name=NP_639924.1;Note=probable transposase%2C len: 320aa%3B previously sequenced as TR:Q9L8H1 (EMBL:AF204735). Also similar to many others eg. TR:Q9R9Q9 (EMBL:AF144039)  transposase from Rhizobium meliloti (Sinorhizobium meliloti) (277 aa) fasta scores%3B opt: 734%2C z-score: 824.2%2C E(): 0%2C 44.3%25 identity in 262 aa overlap. Also similar to SCP1.82 fasta scores%3B opt: 1219%2C z-score: 1504.5%2C E(): 0%2C 64.0%25 identity in 275 aa overlap. Contains Pfam match to entry PF01511 Transposase_6%2C Transposase and Pfam match to entry PF01675 Transposase_13%2C Transposase.;gbkey=CDS;product=transposase;protein_id=NP_639924.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	319736	319990	.	+	.	ID=id10488;Dbxref=GeneID:1095398;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 183.10%2C E-value 4.4e-51;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	320120	320371	.	+	.	ID=id10489;Dbxref=GeneID:1095398;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 177.60%2C E-value 2e-49;gbkey=misc_feature
NC_003903.1	RefSeq	gene	320862	321857	.	-	.	ID=gene8228;Dbxref=GeneID:1095399;Name=SCP1.317c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.317c
NC_003903.1	RefSeq	CDS	320862	321857	.	-	0	ID=cds8081;Parent=gene8228;Dbxref=Genbank:NP_639925.1,GeneID:1095399;Name=NP_639925.1;Note=probable short-chain oxidoreductase%2C len: 331aa%3B previously sequenced as TR:Q9L8H0 (EMBL:AF204735). Also similar to many others eg. TR:Q9RR99 (EMBL:AE002088) oxidoreductase%2C short-chain dehydrogenase/reductase family from Deinococcus radiodurans (336 aa) fasta scores%3B opt: 795%2C z-score: 899.7%2C E(): 0%2C 44.7%25 identity in 320 aa overlap. Contains Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=CDS;product=short-chain oxidoreductase;protein_id=NP_639925.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	321159	321740	.	-	.	ID=id10490;Dbxref=GeneID:1095399;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 107.20%2C E-value 3.2e-28;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	321219	321305	.	-	.	ID=id10491;Dbxref=GeneID:1095399;Note=PS00061 Short-chain dehydrogenases/reductases family signature;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	321933	321937	.	+	.	ID=id10492;gbkey=RBS
NC_003903.1	RefSeq	gene	321944	322858	.	+	.	ID=gene8229;Dbxref=GeneID:1095400;Name=SCP1.318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.318
NC_003903.1	RefSeq	CDS	321944	322858	.	+	0	ID=cds8082;Parent=gene8229;Dbxref=Genbank:NP_639926.1,GeneID:1095400;Name=NP_639926.1;Note=possible AraC-family transcriptional regulator%2C len: 304aa%3B previously sequenced as TR:Q9L8G9 (EMBL:AF204735). Similar to many eg. from streptomycetes eg. SW:Q03320 (ARAL_STRAT)  AraC-like transcription regulator from Tn4811-homologous locus in Streptomyces antibioticus (303 aa) fasta scores%3B opt: 1769%2C z-score: 2065.7%2C E(): 0%2C 88.5%25 identity in 304 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C Prosite match to PS00041 Bacterial regulatory proteins%2C araC family signature and helix-turn-helix motif (Score 1345 (+3.77 SD)) at residue 216-237.;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=NP_639926.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	322586	322846	.	+	.	ID=id10493;Dbxref=GeneID:1095400;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 125.10%2C E-value 1.3e-33;gbkey=misc_feature
NC_003903.1	RefSeq	sequence_feature	322697	322825	.	+	.	ID=id10494;Dbxref=GeneID:1095400;Note=PS00041 Bacterial regulatory proteins%2C araC family signature;gbkey=misc_feature
NC_003903.1	RefSeq	gene	323169	323468	.	-	.	ID=gene8230;Dbxref=GeneID:1095401;Name=SCP1.319c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.319c
NC_003903.1	RefSeq	CDS	323169	323468	.	-	0	ID=cds8083;Parent=gene8230;Dbxref=Genbank:NP_639927.1,GeneID:1095401;Name=NP_639927.1;Note=unknown%2C len: 99aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639927.1;transl_table=11
NC_003903.1	RefSeq	gene	323625	324563	.	-	.	ID=gene8231;Dbxref=GeneID:1095402;Name=SCP1.320c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.320c
NC_003903.1	RefSeq	CDS	323625	324563	.	-	0	ID=cds8084;Parent=gene8231;Dbxref=Genbank:NP_639928.1,GeneID:1095402;Name=NP_639928.1;Note=possible conserved integral membrane protein%2C len: 312aa%3B similar to many from Streptomyces coelicolor eg. TR:O69922 (EMBL:AL023861)  integral membrane protein (367 aa) fasta scores%3B opt:  613%2C z-score: 713.6%2C E(): 2.8e-32%2C 44.6%25 identity in 222 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=integral membrane protein;protein_id=NP_639928.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	324743	324749	.	+	.	ID=id10495;gbkey=RBS
NC_003903.1	RefSeq	gene	324753	325778	.	+	.	ID=gene8232;Dbxref=GeneID:1095403;Name=SCP1.321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.321
NC_003903.1	RefSeq	CDS	324753	325778	.	+	0	ID=cds8085;Parent=gene8232;Dbxref=Genbank:NP_639929.1,GeneID:1095403;Name=NP_639929.1;Note=unknown%2C len: 341aa%3B similar to TR:Q9S292 (EMBL:AL096849) hypothetical protein from Streptomyces coelicolor (322 aa) fasta scores%3B opt:  620%2C z-score: 708.4%2C E(): 5.5e-32%2C 37.3%25 identity in 322 aa overlap.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639929.1;transl_table=11
NC_003903.1	RefSeq	gene	325805	326185	.	+	.	ID=gene8233;Dbxref=GeneID:1095404;Name=SCP1.322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.322
NC_003903.1	RefSeq	CDS	325805	326185	.	+	0	ID=cds8086;Parent=gene8233;Dbxref=Genbank:NP_639930.1,GeneID:1095404;Name=NP_639930.1;Note=unknown%2C len: 126aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639930.1;transl_table=11
NC_003903.1	RefSeq	gene	326240	326899	.	-	.	ID=gene8234;Dbxref=GeneID:1095405;Name=SCP1.323c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.323c
NC_003903.1	RefSeq	CDS	326240	326899	.	-	0	ID=cds8087;Parent=gene8234;Dbxref=Genbank:NP_639931.1,GeneID:1095405;Name=NP_639931.1;Note=possible secreted protein%2C len: 219aa%3B similar to TR:Q9KY42 (EMBL:AL356892) hypothetical protein from Streptomyces coelicolor (214 aa) fasta scores%3B opt: 499%2C z-score: 600.0%2C E(): 5.9e-26%2C 41.9%25 identity in 210 aa overlap. Also strongly similar over full length to CDS SCP1.267 (fasta scores%3B opt: 1190%2C z-score: 1349.2%2C E(): 0%2C 77.5%25 identity in 218 aa overlap) and C-terminus similar to its neighbouring CDS SCP1.268 (111 aa) (fasta scores%3B opt: 401%2C z-score: 463.8%2C E(): 2.6e-21%2C 57.4%25 identity in 108 aa overlap). Contains a possible cleavable N-terminal signal sequence.;gbkey=CDS;product=secreted protein;protein_id=NP_639931.1;transl_table=11
NC_003903.1	RefSeq	repeat_region	326246	326981	.	-	.	ID=id10496;Note=Inverted and imperfectly repeated at 264720..265446. Inverted and perfectly repeated at 29043..29778.;gbkey=repeat_region
NC_003903.1	RefSeq	repeat_region	326267	326534	.	-	.	ID=id10497;Dbxref=GeneID:1095405;Note=Inveretd and imperfectly repeated at 265494..265758. Inverted and perfectly repeated at 29490..29757.;gbkey=repeat_region
NC_003903.1	RefSeq	gene	327133	327696	.	+	.	ID=gene8235;Dbxref=GeneID:1095406;Name=SCP1.324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.324
NC_003903.1	RefSeq	CDS	327133	327696	.	+	0	ID=cds8088;Parent=gene8235;Dbxref=Genbank:NP_639932.1,GeneID:1095406;Name=NP_639932.1;Note=unknown%2C len: 187aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639932.1;transl_table=11
NC_003903.1	RefSeq	gene	327874	328332	.	-	.	ID=gene8236;Dbxref=GeneID:1095407;Name=SCP1.325c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.325c
NC_003903.1	RefSeq	CDS	327874	328332	.	-	0	ID=cds8089;Parent=gene8236;Dbxref=Genbank:NP_639933.1,GeneID:1095407;Name=NP_639933.1;Note=unknown%2C len: 152aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639933.1;transl_table=11
NC_003903.1	RefSeq	gene	329148	329501	.	+	.	ID=gene8237;Dbxref=GeneID:1095408;Name=SCP1.326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.326
NC_003903.1	RefSeq	CDS	329148	329501	.	+	0	ID=cds8090;Parent=gene8237;Dbxref=Genbank:NP_639934.1,GeneID:1095408;Name=NP_639934.1;Note=unknown%2C len: 117aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639934.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	329545	329549	.	+	.	ID=id10498;gbkey=RBS
NC_003903.1	RefSeq	gene	329554	332925	.	+	.	ID=gene8238;Dbxref=GeneID:1095409;Name=SCP1.327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.327
NC_003903.1	RefSeq	CDS	329554	332925	.	+	0	ID=cds8091;Parent=gene8238;Dbxref=Genbank:NP_639935.1,GeneID:1095409;Name=NP_639935.1;Note=unknown%2C len: 1123aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639935.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	332929	332975	.	-	.	ID=id10499;Note=Score 69: 23/23 (100%25) matches%2C 0 gaps%2C possible 23 base loop.;gbkey=stem_loop
NC_003903.1	RefSeq	ribosome_entry_site	333102	333106	.	+	.	ID=id10500;gbkey=RBS
NC_003903.1	RefSeq	gene	333120	333962	.	+	.	ID=gene8239;Dbxref=GeneID:1095410;Name=SCP1.328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.328
NC_003903.1	RefSeq	CDS	333120	333962	.	+	0	ID=cds8092;Parent=gene8239;Dbxref=Genbank:NP_639936.1,GeneID:1095410;Name=NP_639936.1;Note=unknown%2C len: 280aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639936.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	334675	334679	.	+	.	ID=id10501;gbkey=RBS
NC_003903.1	RefSeq	gene	334686	335750	.	+	.	ID=gene8240;Dbxref=GeneID:1095411;Name=SCP1.329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.329
NC_003903.1	RefSeq	CDS	334686	335750	.	+	0	ID=cds8093;Parent=gene8240;Dbxref=Genbank:NP_639937.1,GeneID:1095411;Name=NP_639937.1;Note=unknown%2C len: 354aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639937.1;transl_table=11
NC_003903.1	RefSeq	gene	335859	336104	.	-	.	ID=gene8241;Dbxref=GeneID:1095412;Name=SCP1.330c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.330c
NC_003903.1	RefSeq	CDS	335859	336104	.	-	0	ID=cds8094;Parent=gene8241;Dbxref=Genbank:NP_639938.1,GeneID:1095412;Name=NP_639938.1;Note=unknown%2C doubtful CDS%2C len: 81aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639938.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	336306	336312	.	+	.	ID=id10502;gbkey=RBS
NC_003903.1	RefSeq	gene	336316	336450	.	+	.	ID=gene8242;Dbxref=GeneID:1095413;Name=SCP1.331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.331
NC_003903.1	RefSeq	CDS	336316	336450	.	+	0	ID=cds8095;Parent=gene8242;Dbxref=Genbank:NP_639939.1,GeneID:1095413;Name=NP_639939.1;Note=unknown%2C doubtful CDS%2C len: 44aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639939.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	336429	336434	.	+	.	ID=id10503;Dbxref=GeneID:1095413;gbkey=RBS
NC_003903.1	RefSeq	gene	336438	336671	.	+	.	ID=gene8243;Dbxref=GeneID:1095414;Name=SCP1.332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.332
NC_003903.1	RefSeq	CDS	336438	336671	.	+	0	ID=cds8096;Parent=gene8243;Dbxref=Genbank:NP_639940.1,GeneID:1095414;Name=NP_639940.1;Note=unknown%2C len: 77aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639940.1;transl_table=11
NC_003903.1	RefSeq	gene	336746	337603	.	+	.	ID=gene8244;Dbxref=GeneID:1095415;Name=SCP1.333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.333
NC_003903.1	RefSeq	CDS	336746	337603	.	+	0	ID=cds8097;Parent=gene8244;Dbxref=Genbank:NP_639941.1,GeneID:1095415;Name=NP_639941.1;Note=unknown%2C len: 285aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639941.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	337617	337621	.	+	.	ID=id10504;gbkey=RBS
NC_003903.1	RefSeq	gene	337624	338406	.	+	.	ID=gene8245;Dbxref=GeneID:1095416;Name=SCP1.334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.334
NC_003903.1	RefSeq	CDS	337624	338406	.	+	0	ID=cds8098;Parent=gene8245;Dbxref=Genbank:NP_639942.1,GeneID:1095416;Name=NP_639942.1;Note=unknown%2C len: 260aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639942.1;transl_table=11
NC_003903.1	RefSeq	gene	338412	339638	.	+	.	ID=gene8246;Dbxref=GeneID:1095417;Name=SCP1.335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.335
NC_003903.1	RefSeq	CDS	338412	339638	.	+	0	ID=cds8099;Parent=gene8246;Dbxref=Genbank:NP_639943.1,GeneID:1095417;Name=NP_639943.1;Note=possible DNA integrase/recombinase%2C len: 408aa%3B C-terminal region weakly similar to many members of the 'phage' integrase family eg. SW:P21891 (XERD_ECOLI) integrase/recombinase XerD from Escherichia coli (298 aa) fasta scores%3B opt:  195%2C z-score: 217.2%2C E(): 0.00012%2C 28.1%25 identity in 217 aa overlap. Contains Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family. Possible upstream and downstream alternative translational strat sites.;gbkey=CDS;product=DNA integrase/recombinase;protein_id=NP_639943.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	338997	339545	.	+	.	ID=id10505;Dbxref=GeneID:1095417;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 63.70%2C E-value 4e-15;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	339721	339725	.	+	.	ID=id10506;gbkey=RBS
NC_003903.1	RefSeq	gene	339730	342081	.	+	.	ID=gene8247;Dbxref=GeneID:1095418;Name=SCP1.336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.336
NC_003903.1	RefSeq	CDS	339730	342081	.	+	0	ID=cds8100;Parent=gene8247;Dbxref=Genbank:NP_639944.1,GeneID:1095418;Name=NP_639944.1;Note=possible DNA integrase/recombinase%2C len: 783aa%3B C-terminal region weakly similar to many members of the 'phage' integrase family eg. SW:P06697 (TNPB_STAAU) transposase B (transposon Tn554) from Staphylococcus aureus (630 aa) fasta scores%3B opt:  205%2C z-score: 242.4%2C E(): 4.9e-06%2C 22.1%25 identity in 280 aa overlap. Contains Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family.;gbkey=CDS;product=DNA integrase/recombinase;protein_id=NP_639944.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	341035	341670	.	+	.	ID=id10507;Dbxref=GeneID:1095418;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 61.30%2C E-value 2.1e-14;gbkey=misc_feature
NC_003903.1	RefSeq	gene	342117	342935	.	-	.	ID=gene8248;Dbxref=GeneID:1095419;Name=SCP1.337c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.337c
NC_003903.1	RefSeq	CDS	342117	342935	.	-	0	ID=cds8101;Parent=gene8248;Dbxref=Genbank:NP_639945.1,GeneID:1095419;Name=NP_639945.1;Note=unknown%2C len: 272aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639945.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	342939	342946	.	-	.	ID=id10508;gbkey=RBS
NC_003903.1	RefSeq	gene	343078	343662	.	+	.	ID=gene8249;Dbxref=GeneID:1095420;Name=SCP1.338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.338
NC_003903.1	RefSeq	CDS	343078	343662	.	+	0	ID=cds8102;Parent=gene8249;Dbxref=Genbank:NP_639946.1,GeneID:1095420;Name=NP_639946.1;Note=unknown%2C len: 194aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639946.1;transl_table=11
NC_003903.1	RefSeq	gene	344110	344334	.	-	.	ID=gene8250;Dbxref=GeneID:1095421;Name=SCP1.339c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.339c
NC_003903.1	RefSeq	CDS	344110	344334	.	-	0	ID=cds8103;Parent=gene8250;Dbxref=Genbank:NP_639947.1,GeneID:1095421;Name=NP_639947.1;Note=possible membrane protein%2C len: 74aa%3B contains possible membrane-spanning hydrophobic regions.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639947.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	344346	344350	.	-	.	ID=id10509;gbkey=RBS
NC_003903.1	RefSeq	gene	344594	345742	.	+	.	ID=gene8251;Dbxref=GeneID:1095422;Name=SCP1.340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.340
NC_003903.1	RefSeq	CDS	344594	345742	.	+	0	ID=cds8104;Parent=gene8251;Dbxref=Genbank:NP_639948.1,GeneID:1095422;Name=NP_639948.1;Note=unknown%2C len: 382aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639948.1;transl_table=11
NC_003903.1	RefSeq	gene	345775	347391	.	+	.	ID=gene8252;Dbxref=GeneID:1095423;Name=SCP1.341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.341
NC_003903.1	RefSeq	CDS	345775	347391	.	+	0	ID=cds8105;Parent=gene8252;Dbxref=Genbank:NP_639949.1,GeneID:1095423;Name=NP_639949.1;Note=conserved hypothetical protein%2C len: 538aa%3B C-terminal similar to TR:Q9KXL1 (EMBL:AL357524) hypothetical protein from Streptomyces coelicolor (282 aa) fasta scores%3B opt:  682%2C z-score: 810.6%2C E(): 0%2C 51.1%25 identity in 235 aa overlap. Contains TTA encoded leucine at residue 154%2C possible target for bldA regulation.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639949.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	346234	346236	.	+	.	ID=id10510;Dbxref=GeneID:1095423;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	gene	347434	347889	.	+	.	ID=gene8253;Dbxref=GeneID:1095424;Name=SCP1.342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.342
NC_003903.1	RefSeq	CDS	347434	347889	.	+	0	ID=cds8106;Parent=gene8253;Dbxref=Genbank:NP_639950.1,GeneID:1095424;Name=NP_639950.1;Note=doubtful CDS%2C unknown%2C len: 151aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639950.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	347871	347876	.	+	.	ID=id10511;Dbxref=GeneID:1095424;gbkey=RBS
NC_003903.1	RefSeq	gene	347886	348629	.	+	.	ID=gene8254;Dbxref=GeneID:1095425;Name=SCP1.343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.343
NC_003903.1	RefSeq	CDS	347886	348629	.	+	0	ID=cds8107;Parent=gene8254;Dbxref=Genbank:NP_639951.1,GeneID:1095425;Name=NP_639951.1;Note=unknown%2C len: 247aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639951.1;transl_table=11
NC_003903.1	RefSeq	gene	348753	349247	.	-	.	ID=gene8255;Dbxref=GeneID:1095426;Name=SCP1.344c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.344c
NC_003903.1	RefSeq	CDS	348753	349247	.	-	0	ID=cds8108;Parent=gene8255;Dbxref=Genbank:NP_639952.1,GeneID:1095426;Name=NP_639952.1;Note=unknown%2C contains tta encoded leucine at residue 33%2C possible target for bldA regulation. len: 164aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639952.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	349149	349151	.	-	.	ID=id10512;Dbxref=GeneID:1095426;Note=tta leucine codon%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003903.1	RefSeq	ribosome_entry_site	349252	349259	.	-	.	ID=id10513;gbkey=RBS
NC_003903.1	RefSeq	stem_loop	349434	349706	.	-	.	ID=id10514;Note=Inverted repeat spanning a region of non-coding DNA. Score 96: 36/39 ( 92%25) matches%2C 0 gaps.;gbkey=stem_loop
NC_003903.1	RefSeq	ribosome_entry_site	349832	349837	.	+	.	ID=id10515;gbkey=RBS
NC_003903.1	RefSeq	gene	349843	350508	.	+	.	ID=gene8256;Dbxref=GeneID:1095427;Name=SCP1.345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.345
NC_003903.1	RefSeq	CDS	349843	350508	.	+	0	ID=cds8109;Parent=gene8256;Dbxref=Genbank:NP_639953.1,GeneID:1095427;Name=NP_639953.1;Note=unknown%2C len: 221aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639953.1;transl_table=11
NC_003903.1	RefSeq	gene	350584	351105	.	+	.	ID=gene8257;Dbxref=GeneID:1095428;Name=SCP1.346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.346
NC_003903.1	RefSeq	CDS	350584	351105	.	+	0	ID=cds8110;Parent=gene8257;Dbxref=Genbank:NP_639954.1,GeneID:1095428;Name=NP_639954.1;Note=unknown%2C len: 173aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639954.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	351089	351095	.	+	.	ID=id10516;Dbxref=GeneID:1095428;gbkey=RBS
NC_003903.1	RefSeq	gene	351102	351395	.	+	.	ID=gene8258;Dbxref=GeneID:1095429;Name=SCP1.347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.347
NC_003903.1	RefSeq	CDS	351102	351395	.	+	0	ID=cds8111;Parent=gene8258;Dbxref=Genbank:NP_639955.1,GeneID:1095429;Name=NP_639955.1;Note=unknown%2C len: 97aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639955.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	351380	351383	.	+	.	ID=id10517;Dbxref=GeneID:1095429;gbkey=RBS
NC_003903.1	RefSeq	gene	351392	351616	.	+	.	ID=gene8259;Dbxref=GeneID:1095430;Name=SCP1.348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.348
NC_003903.1	RefSeq	CDS	351392	351616	.	+	0	ID=cds8112;Parent=gene8259;Dbxref=Genbank:NP_639956.1,GeneID:1095430;Name=NP_639956.1;Note=unknown%2C len: 74aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639956.1;transl_table=11
NC_003903.1	RefSeq	stem_loop	351790	352050	.	-	.	ID=id10518;Note=Inverted repeat spanning a region of non-coding DNA. Score 52: 24/29 ( 82%25) matches%2C 0 gaps.;gbkey=stem_loop
NC_003903.1	RefSeq	ribosome_entry_site	352193	352197	.	+	.	ID=id10519;gbkey=RBS
NC_003903.1	RefSeq	gene	352205	352600	.	+	.	ID=gene8260;Dbxref=GeneID:1095431;Name=SCP1.349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.349
NC_003903.1	RefSeq	CDS	352205	352600	.	+	0	ID=cds8113;Parent=gene8260;Dbxref=Genbank:NP_639957.1,GeneID:1095431;Name=NP_639957.1;Note=unknown%2C len: 131aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639957.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	352666	352670	.	+	.	ID=id10520;gbkey=RBS
NC_003903.1	RefSeq	gene	352679	352915	.	+	.	ID=gene8261;Dbxref=GeneID:1095432;Name=SCP1.350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.350
NC_003903.1	RefSeq	CDS	352679	352915	.	+	0	ID=cds8114;Parent=gene8261;Dbxref=Genbank:NP_639958.1,GeneID:1095432;Name=NP_639958.1;Note=unknown%2C len: 78aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639958.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	352893	352898	.	+	.	ID=id10521;Dbxref=GeneID:1095432;gbkey=RBS
NC_003903.1	RefSeq	gene	352903	353121	.	+	.	ID=gene8262;Dbxref=GeneID:1095433;Name=SCP1.351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.351
NC_003903.1	RefSeq	CDS	352903	353121	.	+	0	ID=cds8115;Parent=gene8262;Dbxref=Genbank:NP_639959.1,GeneID:1095433;Name=NP_639959.1;Note=unknown%2C len: 72aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639959.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	353200	353206	.	+	.	ID=id10522;gbkey=RBS
NC_003903.1	RefSeq	gene	353212	354417	.	+	.	ID=gene8263;Dbxref=GeneID:1095434;Name=SCP1.352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.352
NC_003903.1	RefSeq	CDS	353212	354417	.	+	0	ID=cds8116;Parent=gene8263;Dbxref=Genbank:NP_639960.1,GeneID:1095434;Name=NP_639960.1;Note=unknown%2C len: 401aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639960.1;transl_table=11
NC_003903.1	RefSeq	ribosome_entry_site	354491	354496	.	+	.	ID=id10523;gbkey=RBS
NC_003903.1	RefSeq	gene	354502	355125	.	+	.	ID=gene8264;Dbxref=GeneID:1095435;Name=SCP1.353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP1.353
NC_003903.1	RefSeq	CDS	354502	355125	.	+	0	ID=cds8117;Parent=gene8264;Dbxref=Genbank:NP_639961.1,GeneID:1095435;Name=NP_639961.1;Note=unknown%2C len: 207aa;gbkey=CDS;product=hypothetical protein;protein_id=NP_639961.1;transl_table=11
NC_003903.1	RefSeq	sequence_feature	355682	356023	.	-	.	ID=id10524;Note=Previously sequenced as EMBL:S70700 [Left end of SCP1]%3B label: S70700;gbkey=misc_feature
##sequence-region NC_003904.1 1 31317
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=100226
NC_003904.1	RefSeq	region	1	31317	.	+	.	ID=id10525;Dbxref=taxon:100226;Is_circular=true;Name=SCP2;gbkey=Src;genome=plasmid;mol_type=genomic DNA;old-name=Streptomyces coelicolor;plasmid-name=SCP2;serovar=A3(2)
NC_003904.1	RefSeq	sequence_feature	425	1402	.	+	.	ID=id10526;Note=Insertion element IS1648 bounded by 32bp imperfect inverted repeat. Copies of this IS element are also present in the Streptomyces coelicolor chromosome (EMBL:AL023861 and AL031035).;gbkey=misc_feature
NC_003904.1	RefSeq	gene	492	917	.	+	.	ID=gene8265;Dbxref=GeneID:1095046;Name=SCP2.01;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.01
NC_003904.1	RefSeq	CDS	492	917	.	+	0	ID=cds8118;Parent=gene8265;Dbxref=Genbank:NP_639744.1,GeneID:1095046;Name=NP_639744.1;Note=Identical to Streptomyces coelicolor putative IS1648 transposase SC3C8.15 or SC6A9.36 TR:O69927 (EMBL:AL023861) (141 aa) fasta scores: E(): 0%2C 100.0%25 id in 141 aa. Contains Pfam match to entry PF01511 Transposase_6%2C Transposase. Complete protein may be translated via a frameshift into the downstream CDS.;gbkey=CDS;product=putative is1648 transposase;protein_id=NP_639744.1;transl_table=11
NC_003904.1	RefSeq	sequence_feature	594	839	.	+	.	ID=id10527;Dbxref=GeneID:1095046;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 12.30%2C E-value 3.6e-05;gbkey=misc_feature
NC_003904.1	RefSeq	gene	914	1372	.	+	.	ID=gene8266;Dbxref=GeneID:1095047;Name=SCP2.02;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.02
NC_003904.1	RefSeq	CDS	914	1372	.	+	0	ID=cds8119;Parent=gene8266;Dbxref=Genbank:NP_639746.1,GeneID:1095047;Name=NP_639746.1;Note=Identical to Streptomyces coelicolor putative IS1648 transposase SC3C8.16 or SC6A9.37 TR:O69928 (EMBL:AL023861) (152 aa) fasta scores: E(): 0%2C 99.3%25 id in 152 aa. Complete protein may be translated via a frameshift from the upstream CDS.;gbkey=CDS;product=putative is1648 transposase;protein_id=NP_639746.1;transl_table=11
NC_003904.1	RefSeq	gene	3033	4010	.	-	.	ID=gene8267;Dbxref=GeneID:1095048;Name=SCP2.04c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.04c
NC_003904.1	RefSeq	CDS	3033	4010	.	-	0	ID=cds8120;Parent=gene8267;Dbxref=Genbank:NP_639748.1,GeneID:1095048;Name=NP_639748.1;Note=Unknown;gbkey=CDS;product=hypothetical protein;protein_id=NP_639748.1;transl_table=11
NC_003904.1	RefSeq	gene	4007	4939	.	-	.	ID=gene8268;Dbxref=GeneID:1095076;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=SCP2.05c
NC_003904.1	RefSeq	CDS	4007	4939	.	-	0	ID=cds8121;Parent=gene8268;Dbxref=Genbank:NP_639750.1,GeneID:1095076;Name=NP_639750.1;Note=Similar to Caulobacter crescentus chromosome partitioning protein ParA SW:PARA_CAUCR (O05189) (266 aa) fasta scores: E(): 1.3e-21%2C 36.2%25 id in 257 aa%2C and to Streptomyces coelicolor ParA TR:Q9RFM1 (EMBL:AF187159) (357 aa) fasta scores: E(): 2.6e-19%2C 36.1%25 id in 263 aa. Contains Pfam match to entry PF00991 ParA%2C ParA family ATPase;gbkey=CDS;gene=parA;product=putative partitioning protein para;protein_id=NP_639750.1;transl_table=11
NC_003904.1	RefSeq	sequence_feature	4190	4534	.	-	.	ID=id10528;Dbxref=GeneID:1095076;Note=Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 56.80%2C E-value 4.6e-13;gbkey=misc_feature;gene=parA
NC_003904.1	RefSeq	gene	5557	5886	.	+	.	ID=gene8269;Dbxref=GeneID:1095049;Name=SCP2.06;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.06
NC_003904.1	RefSeq	CDS	5557	5886	.	+	0	ID=cds8122;Parent=gene8269;Dbxref=Genbank:NP_639752.1,GeneID:1095049;Name=NP_639752.1;Note=Unknown;gbkey=CDS;product=hypothetical protein;protein_id=NP_639752.1;transl_table=11
NC_003904.1	RefSeq	gene	5935	7050	.	-	.	ID=gene8270;Dbxref=GeneID:1095050;Name=SCP2.07c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.07c
NC_003904.1	RefSeq	CDS	5935	7050	.	-	0	ID=cds8123;Parent=gene8270;Dbxref=Genbank:NP_639755.1,GeneID:1095050;Name=NP_639755.1;Note=Similar to Agrobacterium rhizogenes Riorf136 protein%2C hypothetical integrase TR:BAB16255 (EMBL:AP002086) (383 aa) fasta scores: E(): 7.5e-18%2C 31.6%25 id in 326 aa%2C and to Pseudomonas pavonaceae putative integrase intP TR:Q9RDU9 (EMBL:AJ250371) (379 aa) fasta scores: E(): 4.8e-08%2C 28.2%25 id in 383 aa%2C and to Bacteriophage P1 recombinase Cre SW:RECR_BPP1 (P06956) (343 aa) fasta scores: E(): 0.0001%2C 24.7%25 id in 304 aa. Contains Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family.;gbkey=CDS;product=putative integrase/recombinase;protein_id=NP_639755.1;transl_table=11
NC_003904.1	RefSeq	gene	7201	7386	.	+	.	ID=gene8271;Dbxref=GeneID:1095051;Name=SCP2.08;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.08
NC_003904.1	RefSeq	CDS	7201	7386	.	+	0	ID=cds8124;Parent=gene8271;Dbxref=Genbank:NP_639757.1,GeneID:1095051;Name=NP_639757.1;Note=Unknown;gbkey=CDS;product=hypothetical protein;protein_id=NP_639757.1;transl_table=11
NC_003904.1	RefSeq	gene	7612	7782	.	-	.	ID=gene8272;Dbxref=GeneID:1095052;Name=SCP2.09c;end_range=7782,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.09c;partial=true
NC_003904.1	RefSeq	CDS	7612	7782	.	-	0	ID=cds8125;Parent=gene8272;Dbxref=Genbank:NP_639759.1,GeneID:1095052;Name=NP_639759.1;Note=Partial CDS%2C unknown. May have been disrupted by Tn5714 insertion.;end_range=7782,.;gbkey=CDS;partial=true;product=hypothetical protein;protein_id=NP_639759.1;transl_table=11
NC_003904.1	RefSeq	repeat_region	7781	7783	.	-	.	ID=id10529;Note=3 base direct repeat bordering transposon Tn5714. Note difference - TCA in Streptomyces coelicolor plasmid SCP2%2C TGA in Streptomyces coelicolor plasmid SCP1.;gbkey=repeat_region
NC_003904.1	RefSeq	sequence_feature	7784	11295	.	-	.	ID=id10530;Note=Similar to Tn5714 from SCP1;gbkey=misc_feature
NC_003904.1	RefSeq	repeat_region	7784	7794	.	-	.	ID=id10531;Note=Inverted and repeated imperfectly at complement(11285..11295);gbkey=repeat_region
NC_003904.1	RefSeq	gene	8441	9286	.	-	.	ID=gene8273;Dbxref=GeneID:1095053;Name=SCP2.10c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.10c
NC_003904.1	RefSeq	CDS	8441	9286	.	-	0	ID=cds8126;Parent=gene8273;Dbxref=Genbank:NP_639762.1,GeneID:1095053;Name=NP_639762.1;Note=Similar to Streptomyces lividans characteristic streptomyces coding sequence TR:Q54404 (EMBL:Z11519) (320 aa) fasta scores: E(): 0%2C 64.4%25 id in 275 aa%2C and to Streptomyces coelicolor A3 hypothetical 35.6 kDa protein TR:Q9L8H1 (EMBL:AF204735) (320 aa) fasta scores: E(): 0%2C 64.0%25 id in 275 aa%2C and to Rhizobium meliloti putative transposase tnp TR:Q9R9Q9 (EMBL:AF144039) (277 aa) fasta scores: E(): 0%2C 43.2%25 id in 266 aa%2C and to Streptomyces coelicolor transposase IS468B2 or IS468A-orf or IS468B-orf or SCJ11.27c or SC1B2.16C TR:Q9Z9H3 (EMBL:AB024596) (279 aa) fasta scores: E(): 0%2C 37.0%25 id in 276 aa. Contains Pfam match to entry PF01675 Transposase_13%2C Transposase and Pfam match to entry PF01511 Transposase_6%2C Transposase.;gbkey=CDS;product=putative tn5714 transposase;protein_id=NP_639762.1;transl_table=11
NC_003904.1	RefSeq	sequence_feature	8510	8761	.	-	.	ID=id10532;Dbxref=GeneID:1095053;Note=Pfam match to entry PF01675 Transposase_13%2C Transposase%2C score 130.80%2C E-value 2.5e-35;gbkey=misc_feature
NC_003904.1	RefSeq	sequence_feature	8891	9145	.	-	.	ID=id10533;Dbxref=GeneID:1095053;Note=Pfam match to entry PF01511 Transposase_6%2C Transposase%2C score 130.50%2C E-value 3.2e-35;gbkey=misc_feature
NC_003904.1	RefSeq	gene	9304	9726	.	-	.	ID=gene8274;Dbxref=GeneID:1095054;Name=SCP2.11c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.11c
NC_003904.1	RefSeq	CDS	9304	9726	.	-	0	ID=cds8127;Parent=gene8274;Dbxref=Genbank:NP_639764.1,GeneID:1095054;Name=NP_639764.1;Note=Similar to Streptomyces lividans characteristic streptomyces coding sequence TR:Q54403 (EMBL:Z11519) (138 aa) fasta scores: E(): 1.2e-17%2C 43.0%25 id in 135 aa%2C and to Streptomyces coelicolor A3 hypothetical 15.4 kDa protein TR:Q9L8H2 (EMBL:AF204735) (139 aa) fasta scores: E(): 1.6e-17%2C 43.4%25 id in 136 aa;gbkey=CDS;product=Tn5714 hypothetical protein;protein_id=NP_639764.1;transl_table=11
NC_003904.1	RefSeq	gene	9731	10732	.	-	.	ID=gene8275;Dbxref=GeneID:1095055;Name=SCP2.12c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.12c
NC_003904.1	RefSeq	CDS	9731	10732	.	-	0	ID=cds8128;Parent=gene8275;Dbxref=Genbank:NP_639766.1,GeneID:1095055;Name=NP_639766.1;Note=Similar to Streptomyces lividans characteristic streptomyces coding sequence TR:Q54402 (EMBL:Z11519) (336 aa) fasta scores: E(): 0%2C 49.0%25 id in 335 aa%2C and to Streptomyces coelicolor A3 hypothetical 9.5 kDa protein C-terminal region only TR:Q9L8H3 (EMBL:AF204735) (87 aa) fasta scores: E(): 9.4e-13%2C 50.0%25 id in 82 aa;gbkey=CDS;product=Tn5714 hypothetical protein;protein_id=NP_639766.1;transl_table=11
NC_003904.1	RefSeq	repeat_region	11285	11295	.	-	.	ID=id10534;Note=Inverted and repeated imperfectly at complement(7784..7794);gbkey=repeat_region
NC_003904.1	RefSeq	sequence_feature	11296	11298	.	-	.	ID=id10535;Note=3 base direct repeat bordering transposon Tn5714. Note difference - TCA in Streptomyces coelicolor plasmid SCP2%2C TGA in Streptomyces coelicolor plasmid SCP1.;gbkey=misc_feature
NC_003904.1	RefSeq	gene	11298	11867	.	-	.	ID=gene8276;Dbxref=GeneID:1095056;Name=SCP2.13c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.13c
NC_003904.1	RefSeq	CDS	11298	11867	.	-	0	ID=cds8129;Parent=gene8276;Dbxref=Genbank:NP_639769.1,GeneID:1095056;Name=NP_639769.1;Note=Partial CDS%2C unknown. May have been disrupted by Tn5714 insertion.;end_range=11867,.;gbkey=CDS;partial=true;product=hypothetical protein;protein_id=NP_639769.1;start_range=.,11298;transl_table=11
NC_003904.1	RefSeq	gene	13054	14739	.	-	.	ID=gene8277;Dbxref=GeneID:1095057;Name=SCP2.14c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.14c
NC_003904.1	RefSeq	CDS	13054	14739	.	-	0	ID=cds8130;Parent=gene8277;Dbxref=Genbank:NP_639771.1,GeneID:1095057;Name=NP_639771.1;Note=Possible DNA-binding protein. No significant database matches. Contains helix-turn-helix motif at residue 468-489 Score 1474 (+4.21 SD).;gbkey=CDS;product=putative DNA-binding protein;protein_id=NP_639771.1;transl_table=11
NC_003904.1	RefSeq	gene	14867	15175	.	-	.	ID=gene8278;Dbxref=GeneID:1095058;Name=SCP2.15c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.15c
NC_003904.1	RefSeq	CDS	14867	15175	.	-	0	ID=cds8131;Parent=gene8278;Dbxref=Genbank:NP_639773.1,GeneID:1095058;Name=NP_639773.1;Note=Possible DNA-binding protein. No significant database matches. Contains helix-turn-helix motif at residue 40-61 Score 1956 (+5.85 SD).;gbkey=CDS;product=putative DNA-binding protein;protein_id=NP_639773.1;transl_table=11
NC_003904.1	RefSeq	gene	15261	15611	.	-	.	ID=gene8279;Dbxref=GeneID:1095059;Name=SCP2.16c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.16c
NC_003904.1	RefSeq	CDS	15261	15611	.	-	0	ID=cds8132;Parent=gene8279;Dbxref=Genbank:NP_639775.1,GeneID:1095059;Name=NP_639775.1;Note=No significant database matches.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639775.1;transl_table=11
NC_003904.1	RefSeq	gene	15706	15957	.	-	.	ID=gene8280;Dbxref=GeneID:1095060;Name=SCP2.17c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.17c
NC_003904.1	RefSeq	CDS	15706	15957	.	-	0	ID=cds8133;Parent=gene8280;Dbxref=Genbank:NP_639776.1,GeneID:1095060;Name=NP_639776.1;Note=No significant database matches.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639776.1;transl_table=11
NC_003904.1	RefSeq	gene	15954	16295	.	-	.	ID=gene8281;Dbxref=GeneID:1095061;Name=SCP2.18c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.18c
NC_003904.1	RefSeq	CDS	15954	16295	.	-	0	ID=cds8134;Parent=gene8281;Dbxref=Genbank:NP_639778.1,GeneID:1095061;Name=NP_639778.1;Note=No significant database matches.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639778.1;transl_table=11
NC_003904.1	RefSeq	gene	16318	16860	.	-	.	ID=gene8282;Dbxref=GeneID:1095062;Name=SCP2.19c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.19c
NC_003904.1	RefSeq	CDS	16318	16860	.	-	0	ID=cds8135;Parent=gene8282;Dbxref=Genbank:NP_639781.1,GeneID:1095062;Name=NP_639781.1;Note=No significant database matches.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639781.1;transl_table=11
NC_003904.1	RefSeq	sequence_feature	16588	19855	.	-	.	ID=id10536;Note=Previously sequenced as EMBL:X72857 S.coelicolor plasmid SCP2 transfer region DNA.;gbkey=misc_feature
NC_003904.1	RefSeq	gene	16943	18379	.	-	.	ID=gene8283;Dbxref=GeneID:1095077;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=SCP2.20c
NC_003904.1	RefSeq	CDS	16943	18379	.	-	0	ID=cds8136;Parent=gene8283;Dbxref=Genbank:NP_639782.1,GeneID:1095077;Name=NP_639782.1;Note=Previously sequenced and annotated as Streptomyces coelicolor major plasmid transfer protein traA TR:Q53918 (EMBL:X90546) (478 aa) fasta scores: E(): 0%2C 100.0%25 id in 478 aa%2C and as Streptomyces coelicolor TraA protein TR:Q06256 (EMBL:X72857) (442 aa) fasta scores: E(): 0%2C 99.5%25 id in 442 aa.;gbkey=CDS;gene=traA;product=major plasmid transfer protein%2C traa;protein_id=NP_639782.1;transl_table=11
NC_003904.1	RefSeq	gene	18379	19254	.	-	.	ID=gene8284;Dbxref=GeneID:1095079;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=SCP2.21c
NC_003904.1	RefSeq	CDS	18379	19254	.	-	0	ID=cds8137;Parent=gene8284;Dbxref=Genbank:NP_639784.1,GeneID:1095079;Name=NP_639784.1;Note=Previously sequenced and annotated as Streptomyces coelicolor TraX protein TR:Q06258 (EMBL:X72857) (290 aa) fasta scores: E(): 0%2C 97.6%25 id in 291 aa.;gbkey=CDS;gene=traX;product=plasmid transfer protein TraX;protein_id=NP_639784.1;transl_table=11
NC_003904.1	RefSeq	gene	19332	19745	.	-	.	ID=gene8285;Dbxref=GeneID:1095078;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=SCP2.22c
NC_003904.1	RefSeq	CDS	19332	19745	.	-	0	ID=cds8138;Parent=gene8285;Dbxref=Genbank:NP_639787.1,GeneID:1095078;Name=NP_639787.1;Note=Previously sequenced as Streptomyces coelicolor TraB protein TR:Q06257 (EMBL:X72857) (137 aa) fasta scores: E(): 0%2C 99.3%25 id in 137 aa;gbkey=CDS;gene=traB;product=plasmid transfer protein TraB;protein_id=NP_639787.1;transl_table=11
NC_003904.1	RefSeq	gene	19751	21883	.	-	.	ID=gene8286;Dbxref=GeneID:1095063;Name=SCP2.23c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.23c
NC_003904.1	RefSeq	CDS	19751	21883	.	-	0	ID=cds8139;Parent=gene8286;Dbxref=Genbank:NP_639789.1,GeneID:1095063;Name=NP_639789.1;Note=Possible glycine-rich protein. No significant database matches.;gbkey=CDS;product=putative glycine-rich protein;protein_id=NP_639789.1;transl_table=11
NC_003904.1	RefSeq	gene	22012	22269	.	-	.	ID=gene8287;Dbxref=GeneID:1095064;Name=SCP2.24c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.24c
NC_003904.1	RefSeq	CDS	22012	22269	.	-	0	ID=cds8140;Parent=gene8287;Dbxref=Genbank:NP_639790.1,GeneID:1095064;Name=NP_639790.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_639790.1;transl_table=11
NC_003904.1	RefSeq	gene	22266	22772	.	-	.	ID=gene8288;Dbxref=GeneID:1095065;Name=SCP2.25c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.25c
NC_003904.1	RefSeq	CDS	22266	22772	.	-	0	ID=cds8141;Parent=gene8288;Dbxref=Genbank:NP_639792.1,GeneID:1095065;Name=NP_639792.1;Note=Possible alanine-rich protein. No significant database matches.;gbkey=CDS;product=putative alanine-rich protein;protein_id=NP_639792.1;transl_table=11
NC_003904.1	RefSeq	gene	23177	24778	.	-	.	ID=gene8289;Dbxref=GeneID:1095066;Name=SCP2.27c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.27c
NC_003904.1	RefSeq	CDS	23177	24778	.	-	0	ID=cds8142;Parent=gene8289;Dbxref=Genbank:NP_639795.1,GeneID:1095066;Name=NP_639795.1;Note=Possible multidomain membrane protein. N-terminal half contains 4 possible membrane spanning regions. C-terminal half appears to be extra-cytoplasmic and includes an alanine-rich%2C possible coiled-coil region at residue 300-461.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639795.1;transl_table=11
NC_003904.1	RefSeq	gene	24875	25078	.	-	.	ID=gene8290;Dbxref=GeneID:1095067;Name=SCP2.28c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.28c
NC_003904.1	RefSeq	CDS	24875	25078	.	-	0	ID=cds8143;Parent=gene8290;Dbxref=Genbank:NP_639797.1,GeneID:1095067;Name=NP_639797.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_639797.1;transl_table=11
NC_003904.1	RefSeq	gene	25224	25319	.	-	.	ID=gene8291;Dbxref=GeneID:1095068;Name=SCP2.30c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.30c
NC_003904.1	RefSeq	CDS	25224	25319	.	-	0	ID=cds8144;Parent=gene8291;Dbxref=Genbank:NP_639799.1,GeneID:1095068;Name=NP_639799.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_639799.1;transl_table=11
NC_003904.1	RefSeq	gene	25412	25702	.	-	.	ID=gene8292;Dbxref=GeneID:1095069;Name=SCP2.31c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.31c
NC_003904.1	RefSeq	CDS	25412	25702	.	-	0	ID=cds8145;Parent=gene8292;Dbxref=Genbank:NP_639801.1,GeneID:1095069;Name=NP_639801.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_639801.1;transl_table=11
NC_003904.1	RefSeq	gene	25774	26253	.	-	.	ID=gene8293;Dbxref=GeneID:1095070;Name=SCP2.32c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.32c
NC_003904.1	RefSeq	CDS	25774	26253	.	-	0	ID=cds8146;Parent=gene8293;Dbxref=Genbank:NP_639804.1,GeneID:1095070;Name=NP_639804.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_639804.1;transl_table=11
NC_003904.1	RefSeq	gene	26665	27462	.	+	.	ID=gene8294;Dbxref=GeneID:1095071;Name=SCP2.35;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.35
NC_003904.1	RefSeq	CDS	26665	27462	.	+	0	ID=cds8147;Parent=gene8294;Dbxref=Genbank:NP_639806.1,GeneID:1095071;Name=NP_639806.1;Note=Similar to many from Streptomyces eg. Streptomyces coelicolor putative gntR-family regulatory protein 2SCD46.29 TR:CAC04051 (EMBL:AL391406) (252 aa) fasta scores: E(): 3e-11%2C 27.6%25 id in 254 aa%2C and to Streptomyces ambofaciens KorsA protein korSA TR:Q07191 (EMBL:Z19589) (259 aa) fasta scores: E(): 5e-09%2C 26.4%25 id in 250 aa. Contains helix-turn-helix motif at residue 35-56.;gbkey=CDS;product=GntR family regulatory protein;protein_id=NP_639806.1;transl_table=11
NC_003904.1	RefSeq	gene	27459	27794	.	+	.	ID=gene8295;Dbxref=GeneID:1095072;Name=SCP2.36;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.36
NC_003904.1	RefSeq	CDS	27459	27794	.	+	0	ID=cds8148;Parent=gene8295;Dbxref=Genbank:NP_639808.1,GeneID:1095072;Name=NP_639808.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_639808.1;transl_table=11
NC_003904.1	RefSeq	gene	27897	28481	.	+	.	ID=gene8296;Dbxref=GeneID:1095073;Name=SCP2.37;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.37
NC_003904.1	RefSeq	CDS	27897	28481	.	+	0	ID=cds8149;Parent=gene8296;Dbxref=Genbank:NP_639809.1,GeneID:1095073;Name=NP_639809.1;Note=No significant database matches. Contains TTA encoded leucine at residue 14%2C possible target for bldA regulation.;gbkey=CDS;product=hypothetical protein;protein_id=NP_639809.1;transl_table=11
NC_003904.1	RefSeq	sequence_feature	27936	27938	.	+	.	ID=id10537;Dbxref=GeneID:1095073;Note=TTA encoding leucine at residue 14 of CDS SCP2.37%2C possible target for bldA regulation.;gbkey=misc_feature
NC_003904.1	RefSeq	gene	28549	28959	.	-	.	ID=gene8297;Dbxref=GeneID:1095074;Name=SCP2.38c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.38c
NC_003904.1	RefSeq	CDS	28549	28959	.	-	0	ID=cds8150;Parent=gene8297;Dbxref=Genbank:NP_639811.1,GeneID:1095074;Name=NP_639811.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_639811.1;transl_table=11
NC_003904.1	RefSeq	sequence_feature	28708	30077	.	-	.	ID=id10538;Note=Region similar to EMBL:E01115 DNA encoding a minimal replicon of SCP2 mutant (SCP2*);gbkey=misc_feature
NC_003904.1	RefSeq	gene	28965	29450	.	-	.	ID=gene8298;Dbxref=GeneID:1095075;Name=SCP2.39c;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SCP2.39c
NC_003904.1	RefSeq	CDS	28965	29450	.	-	0	ID=cds8151;Parent=gene8298;Dbxref=Genbank:NP_639813.1,GeneID:1095075;Name=NP_639813.1;Note=Possible regulatory protein. Similar to Streptomyces rochei replicative protein Repl1 TR:BAB18036 (EMBL:AB034982) (150 aa) fasta scores: E(): 0.016%2C 27.9%25 id in 147 aa%2C and to Selenomonas ruminantium plasmid PONE430 TR:O50587 (EMBL:AB003193) (171 aa) fasta scores: E(): 1.8%2C 20.1%25 id in 149 aa%2C and to Streptomyces aureofaciens sporulation transcription factor whiH TR:Q9ZA83 (EMBL:AF096293) (295 aa) fasta scores: E(): 2.1%2C 26.7%25 id in 150 aa%2C and to Streptomyces coelicolor putative ROK-family regulatory protein SC8E4A.27 TR:Q9L1X8 (EMBL:AL138662) (409 aa) fasta scores: E(): 2.3%2C 28.9%25 id in 121 aa. Contains helix-turn-helix motif at residue 66-87.;gbkey=CDS;product=putative regulatory protein;protein_id=NP_639813.1;transl_table=11
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