locus-tag class description LLI13_RS00090 PF13340 Putative transposase of IS4/5 family (DUF4096) LLI13_RS00135 PF03364 Polyketide cyclase / dehydrase and lipid transport LLI13_RS00180 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LLI13_RS00180 PF00175 Oxidoreductase NAD-binding domain LLI13_RS00230 PF01925 Sulfite exporter TauE/SafE LLI13_RS00240 PF07690 Major Facilitator Superfamily LLI13_RS00250 PF00550 Phosphopantetheine attachment site LLI13_RS00250 PF08659 KR domain LLI13_RS00250 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS00250 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00250 PF00698 Acyl transferase domain LLI13_RS00250 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS00255 PF00106 short chain dehydrogenase LLI13_RS00260 PF00698 Acyl transferase domain LLI13_RS00265 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS00265 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00270 PF00550 Phosphopantetheine attachment site LLI13_RS00275 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS00280 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS00285 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LLI13_RS00285 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LLI13_RS00290 PF00698 Acyl transferase domain LLI13_RS00295 PF00698 Acyl transferase domain LLI13_RS00295 PF03060 Nitronate monooxygenase LLI13_RS00300 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS00300 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00300 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS00300 PF08659 KR domain LLI13_RS00300 PF00550 Phosphopantetheine attachment site LLI13_RS00300 PF14765 Polyketide synthase dehydratase LLI13_RS00305 PF08659 KR domain LLI13_RS00305 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS00305 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00305 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS00305 PF14765 Polyketide synthase dehydratase LLI13_RS00305 PF00550 Phosphopantetheine attachment site LLI13_RS00320 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00320 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS00320 PF00550 Phosphopantetheine attachment site LLI13_RS00320 PF14765 Polyketide synthase dehydratase LLI13_RS00320 PF08659 KR domain LLI13_RS00320 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS00325 PF08659 KR domain LLI13_RS00325 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS00325 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00325 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS00325 PF00550 Phosphopantetheine attachment site LLI13_RS00325 PF14765 Polyketide synthase dehydratase LLI13_RS00330 PF08659 KR domain LLI13_RS00330 PF14765 Polyketide synthase dehydratase LLI13_RS00330 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00330 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS00330 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS00330 PF08242 Methyltransferase domain LLI13_RS00330 PF00550 Phosphopantetheine attachment site LLI13_RS00340 PF00067 Cytochrome P450 LLI13_RS00345 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LLI13_RS00345 PF01648 4'-phosphopantetheinyl transferase superfamily LLI13_RS00350 PF03781 Sulfatase-modifying factor enzyme 1 LLI13_RS00390 PF00069 Protein kinase domain LLI13_RS00390 PF13360 PQQ-like domain LLI13_RS00410 PF00248 Aldo/keto reductase family LLI13_RS00415 PF00704 Glycosyl hydrolases family 18 LLI13_RS00415 PF00041 Fibronectin type III domain LLI13_RS00415 PF00553 Cellulose binding domain LLI13_RS00420 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS00430 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS00440 PF00232 Glycosyl hydrolase family 1 LLI13_RS00455 PF00011 Hsp20/alpha crystallin family LLI13_RS00465 PF13302 Acetyltransferase (GNAT) domain LLI13_RS00475 PF03848 Tellurite resistance protein TehB LLI13_RS00535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLI13_RS00555 PF13302 Acetyltransferase (GNAT) domain LLI13_RS00575 PF00144 Beta-lactamase LLI13_RS00590 PF00248 Aldo/keto reductase family LLI13_RS00615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLI13_RS00615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LLI13_RS00620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LLI13_RS00620 PF13378 Enolase C-terminal domain-like LLI13_RS00625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLI13_RS00625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LLI13_RS00630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLI13_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS00640 PF12911 N-terminal TM domain of oligopeptide transport permease C LLI13_RS00640 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS00645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS00645 PF00005 ABC transporter LLI13_RS00650 PF00005 ABC transporter LLI13_RS00650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS00675 PF01145 SPFH domain / Band 7 family LLI13_RS00715 PF00294 pfkB family carbohydrate kinase LLI13_RS00720 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS00730 PF00005 ABC transporter LLI13_RS00735 PF05025 RbsD / FucU transport protein family LLI13_RS00740 PF01791 DeoC/LacD family aldolase LLI13_RS00745 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS00745 PF07702 UTRA domain LLI13_RS00755 PF01638 HxlR-like helix-turn-helix LLI13_RS00775 PF01381 Helix-turn-helix LLI13_RS00780 PF00561 alpha/beta hydrolase fold LLI13_RS00790 PF09924 Uncharacterised conserved protein (DUF2156) LLI13_RS00790 PF00152 tRNA synthetases class II (D, K and N) LLI13_RS00790 PF16995 Transmembrane region of lysyl-tRNA synthetase LLI13_RS00790 PF01336 OB-fold nucleic acid binding domain LLI13_RS00795 PF13520 Amino acid permease LLI13_RS00810 PF13419 Haloacid dehalogenase-like hydrolase LLI13_RS00815 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS00820 PF00111 2Fe-2S iron-sulfur cluster binding domain LLI13_RS00820 PF00970 Oxidoreductase FAD-binding domain LLI13_RS00820 PF00175 Oxidoreductase NAD-binding domain LLI13_RS00830 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS00830 PF07729 FCD domain LLI13_RS00835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS00835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS00840 PF02803 Thiolase, C-terminal domain LLI13_RS00840 PF00108 Thiolase, N-terminal domain LLI13_RS00850 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS00850 PF00698 Acyl transferase domain LLI13_RS00850 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS00850 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00850 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS00850 PF08659 KR domain LLI13_RS00850 PF00550 Phosphopantetheine attachment site LLI13_RS00850 PF14765 Polyketide synthase dehydratase LLI13_RS00855 PF02515 CoA-transferase family III LLI13_RS00860 PF00501 AMP-binding enzyme LLI13_RS00860 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS00865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS00865 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS00865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS00870 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS00875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS00875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS00880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS00880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS00890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS00890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS00890 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS00895 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS00900 PF02515 CoA-transferase family III LLI13_RS00905 PF00083 Sugar (and other) transporter LLI13_RS00905 PF07690 Major Facilitator Superfamily LLI13_RS00915 PF00069 Protein kinase domain LLI13_RS00915 PF03793 PASTA domain LLI13_RS00925 PF09382 RQC domain LLI13_RS00925 PF00270 DEAD/DEAH box helicase LLI13_RS00925 PF00570 HRDC domain LLI13_RS00925 PF00271 Helicase conserved C-terminal domain LLI13_RS00925 PF16124 RecQ zinc-binding LLI13_RS00930 PF02983 Alpha-lytic protease prodomain LLI13_RS00930 PF00089 Trypsin LLI13_RS00950 PF07690 Major Facilitator Superfamily LLI13_RS00960 PF01872 RibD C-terminal domain LLI13_RS00990 PF14765 Polyketide synthase dehydratase LLI13_RS00990 PF00550 Phosphopantetheine attachment site LLI13_RS00990 PF00698 Acyl transferase domain LLI13_RS00990 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS00990 PF00107 Zinc-binding dehydrogenase LLI13_RS00990 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS00990 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS00990 PF08659 KR domain LLI13_RS00990 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS01010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS01010 PF03466 LysR substrate binding domain LLI13_RS01015 PF07690 Major Facilitator Superfamily LLI13_RS01025 PF06965 Na+/H+ antiporter 1 LLI13_RS01025 PF13462 Thioredoxin LLI13_RS01050 PF07690 Major Facilitator Superfamily LLI13_RS01055 PF13472 GDSL-like Lipase/Acylhydrolase family LLI13_RS01085 PF00583 Acetyltransferase (GNAT) family LLI13_RS01090 PF01176 Translation initiation factor 1A / IF-1 LLI13_RS01095 PF12706 Beta-lactamase superfamily domain LLI13_RS01105 PF03466 LysR substrate binding domain LLI13_RS01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS01115 PF02540 NAD synthase LLI13_RS01130 PF13649 Methyltransferase domain LLI13_RS01135 PF04476 4-HFC-P synthase LLI13_RS01140 PF00171 Aldehyde dehydrogenase family LLI13_RS01145 PF00107 Zinc-binding dehydrogenase LLI13_RS01145 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS01150 PF04072 Leucine carboxyl methyltransferase LLI13_RS01155 PF00501 AMP-binding enzyme LLI13_RS01160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS01160 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS01160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS01165 PF00108 Thiolase, N-terminal domain LLI13_RS01165 PF02803 Thiolase, C-terminal domain LLI13_RS01170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS01170 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS01170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS01175 PF00296 Luciferase-like monooxygenase LLI13_RS01180 PF02515 CoA-transferase family III LLI13_RS01185 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS01185 PF02909 Tetracyclin repressor-like, C-terminal domain LLI13_RS01195 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS01195 PF00107 Zinc-binding dehydrogenase LLI13_RS01200 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS01205 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LLI13_RS01215 PF13185 GAF domain LLI13_RS01215 PF13492 GAF domain LLI13_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS01215 PF07730 Histidine kinase LLI13_RS01220 PF00083 Sugar (and other) transporter LLI13_RS01235 PF10503 Esterase PHB depolymerase LLI13_RS01240 PF01144 Coenzyme A transferase LLI13_RS01245 PF01144 Coenzyme A transferase LLI13_RS01250 PF13280 WYL domain LLI13_RS01250 PF08279 HTH domain LLI13_RS01265 PF04029 2-phosphosulpholactate phosphatase LLI13_RS01290 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS01290 PF00107 Zinc-binding dehydrogenase LLI13_RS01300 PF00376 MerR family regulatory protein LLI13_RS01300 PF09278 MerR, DNA binding LLI13_RS01340 PF01297 Zinc-uptake complex component A periplasmic LLI13_RS01350 PF00950 ABC 3 transport family LLI13_RS01355 PF00005 ABC transporter LLI13_RS01365 PF08281 Sigma-70, region 4 LLI13_RS01365 PF04542 Sigma-70 region 2 LLI13_RS01365 PF12680 SnoaL-like domain LLI13_RS01370 PF07690 Major Facilitator Superfamily LLI13_RS01375 PF13185 GAF domain LLI13_RS01375 PF13492 GAF domain LLI13_RS01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS01375 PF07730 Histidine kinase LLI13_RS01380 PF00005 ABC transporter LLI13_RS01385 PF01032 FecCD transport family LLI13_RS01405 PF00171 Aldehyde dehydrogenase family LLI13_RS01410 PF00266 Aminotransferase class-V LLI13_RS01420 PF03301 Tryptophan 2,3-dioxygenase LLI13_RS01430 PF00970 Oxidoreductase FAD-binding domain LLI13_RS01430 PF00111 2Fe-2S iron-sulfur cluster binding domain LLI13_RS01430 PF00175 Oxidoreductase NAD-binding domain LLI13_RS01435 PF01883 Iron-sulfur cluster assembly protein LLI13_RS01440 PF05138 Phenylacetic acid catabolic protein LLI13_RS01450 PF05138 Phenylacetic acid catabolic protein LLI13_RS01455 PF00550 Phosphopantetheine attachment site LLI13_RS01460 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS01460 PF00501 AMP-binding enzyme LLI13_RS01475 PF00107 Zinc-binding dehydrogenase LLI13_RS01475 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS01480 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS01480 PF00668 Condensation domain LLI13_RS01480 PF00698 Acyl transferase domain LLI13_RS01480 PF00550 Phosphopantetheine attachment site LLI13_RS01480 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS01480 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS01485 PF00550 Phosphopantetheine attachment site LLI13_RS01485 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS01485 PF00501 AMP-binding enzyme LLI13_RS01485 PF00668 Condensation domain LLI13_RS01485 PF00975 Thioesterase domain LLI13_RS01490 PF16911 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus LLI13_RS01495 PF04542 Sigma-70 region 2 LLI13_RS01495 PF08281 Sigma-70, region 4 LLI13_RS01520 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS01520 PF13823 Alcohol dehydrogenase GroES-associated LLI13_RS01520 PF00107 Zinc-binding dehydrogenase LLI13_RS01530 PF00248 Aldo/keto reductase family LLI13_RS01555 PF01638 HxlR-like helix-turn-helix LLI13_RS01560 PF12697 Alpha/beta hydrolase family LLI13_RS01570 PF00652 Ricin-type beta-trefoil lectin domain LLI13_RS01570 PF00331 Glycosyl hydrolase family 10 LLI13_RS01575 PF00457 Glycosyl hydrolases family 11 LLI13_RS01575 PF03422 Carbohydrate binding module (family 6) LLI13_RS01590 PF04616 Glycosyl hydrolases family 43 LLI13_RS01590 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain LLI13_RS01595 PF01047 MarR family LLI13_RS01600 PF03176 MMPL family LLI13_RS01605 PF02146 Sir2 family LLI13_RS01615 PF03551 Transcriptional regulator PadR-like family LLI13_RS01615 PF13847 Methyltransferase domain LLI13_RS01620 PF07681 DoxX LLI13_RS01655 PF08946 Osmosensory transporter coiled coil LLI13_RS01655 PF00083 Sugar (and other) transporter LLI13_RS01670 PF00037 4Fe-4S binding domain LLI13_RS01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS01680 PF01513 ATP-NAD kinase LLI13_RS01685 PF00471 Ribosomal protein L33 LLI13_RS01710 PF07728 AAA domain (dynein-related subfamily) LLI13_RS01790 PF00248 Aldo/keto reductase family LLI13_RS01805 PF00561 alpha/beta hydrolase fold LLI13_RS01815 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS01820 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS01835 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS01840 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS01845 PF13407 Periplasmic binding protein domain LLI13_RS01850 PF00005 ABC transporter LLI13_RS01855 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS01860 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS01875 PF04616 Glycosyl hydrolases family 43 LLI13_RS01890 PF00533 BRCA1 C Terminus (BRCT) domain LLI13_RS01890 PF01653 NAD-dependent DNA ligase adenylation domain LLI13_RS01890 PF03120 NAD-dependent DNA ligase OB-fold domain LLI13_RS01890 PF12826 Helix-hairpin-helix motif LLI13_RS01895 PF13460 NAD(P)H-binding LLI13_RS01900 PF05139 Erythromycin esterase LLI13_RS01900 PF00156 Phosphoribosyl transferase domain LLI13_RS01910 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LLI13_RS01910 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LLI13_RS01915 PF00753 Metallo-beta-lactamase superfamily LLI13_RS01920 PF07859 alpha/beta hydrolase fold LLI13_RS01925 PF01494 FAD binding domain LLI13_RS01940 PF00067 Cytochrome P450 LLI13_RS01950 PF14759 Reductase C-terminal LLI13_RS01950 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS01955 PF03466 LysR substrate binding domain LLI13_RS01960 PF04542 Sigma-70 region 2 LLI13_RS01960 PF08281 Sigma-70, region 4 LLI13_RS01965 PF03795 YCII-related domain LLI13_RS01970 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS01975 PF01144 Coenzyme A transferase LLI13_RS01980 PF01144 Coenzyme A transferase LLI13_RS01985 PF00108 Thiolase, N-terminal domain LLI13_RS01985 PF02803 Thiolase, C-terminal domain LLI13_RS01990 PF01494 FAD binding domain LLI13_RS02000 PF01557 Fumarylacetoacetate (FAA) hydrolase family LLI13_RS02005 PF07883 Cupin domain LLI13_RS02010 PF09339 IclR helix-turn-helix domain LLI13_RS02010 PF01614 Bacterial transcriptional regulator LLI13_RS02020 PF16990 Carbohydrate binding module (family 35) LLI13_RS02020 PF03422 Carbohydrate binding module (family 6) LLI13_RS02020 PF13199 Glycosyl hydrolase family 66 LLI13_RS02025 PF08241 Methyltransferase domain LLI13_RS02035 PF02785 Biotin carboxylase C-terminal domain LLI13_RS02035 PF00289 Biotin carboxylase, N-terminal domain LLI13_RS02035 PF00364 Biotin-requiring enzyme LLI13_RS02035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLI13_RS02035 PF00682 HMGL-like LLI13_RS02035 PF02436 Conserved carboxylase domain LLI13_RS02040 PF00082 Subtilase family LLI13_RS02040 PF05922 Peptidase inhibitor I9 LLI13_RS02050 PF07681 DoxX LLI13_RS02065 PF00501 AMP-binding enzyme LLI13_RS02075 PF00266 Aminotransferase class-V LLI13_RS02080 PF01594 AI-2E family transporter LLI13_RS02090 PF16483 Beta-1,3-glucanase LLI13_RS02090 PF00652 Ricin-type beta-trefoil lectin domain LLI13_RS02095 PF00232 Glycosyl hydrolase family 1 LLI13_RS02100 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS02105 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS02110 PF13416 Bacterial extracellular solute-binding protein LLI13_RS02115 PF13802 Galactose mutarotase-like LLI13_RS02115 PF01055 Glycosyl hydrolases family 31 LLI13_RS02120 PF03976 Polyphosphate kinase 2 (PPK2) LLI13_RS02125 PF00106 short chain dehydrogenase LLI13_RS02135 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS02140 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS02155 PF08533 Beta-galactosidase C-terminal domain LLI13_RS02155 PF08532 Beta-galactosidase trimerisation domain LLI13_RS02155 PF02449 Beta-galactosidase LLI13_RS02165 PF12464 Maltose acetyltransferase LLI13_RS02165 PF00132 Bacterial transferase hexapeptide (six repeats) LLI13_RS02175 PF07728 AAA domain (dynein-related subfamily) LLI13_RS02175 PF08406 CbbQ/NirQ/NorQ C-terminal LLI13_RS02190 PF01032 FecCD transport family LLI13_RS02195 PF01497 Periplasmic binding protein LLI13_RS02200 PF00005 ABC transporter LLI13_RS02220 PF01625 Peptide methionine sulfoxide reductase LLI13_RS02230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS02230 PF00989 PAS fold LLI13_RS02230 PF17203 Single cache domain 3 LLI13_RS02230 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LLI13_RS02240 PF00183 Hsp90 protein LLI13_RS02240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS02255 PF02983 Alpha-lytic protease prodomain LLI13_RS02260 PF02031 Streptomyces extracellular neutral proteinase (M7) family LLI13_RS02265 PF00248 Aldo/keto reductase family LLI13_RS02285 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS02290 PF12399 Branched-chain amino acid ATP-binding cassette transporter LLI13_RS02290 PF00005 ABC transporter LLI13_RS02295 PF00005 ABC transporter LLI13_RS02300 PF07905 Purine catabolism regulatory protein-like family LLI13_RS02300 PF13556 PucR C-terminal helix-turn-helix domain LLI13_RS02300 PF17853 GGDEF-like domain LLI13_RS02310 PF12695 Alpha/beta hydrolase family LLI13_RS02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS02355 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LLI13_RS02355 PF17203 Single cache domain 3 LLI13_RS02355 PF00989 PAS fold LLI13_RS02360 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS02370 PF03633 Glycosyl hydrolase family 65, C-terminal domain LLI13_RS02370 PF03632 Glycosyl hydrolase family 65 central catalytic domain LLI13_RS02370 PF02358 Trehalose-phosphatase LLI13_RS02370 PF03636 Glycosyl hydrolase family 65, N-terminal domain LLI13_RS02375 PF13492 GAF domain LLI13_RS02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS02375 PF13185 GAF domain LLI13_RS02375 PF07730 Histidine kinase LLI13_RS02380 PF00175 Oxidoreductase NAD-binding domain LLI13_RS02380 PF00042 Globin LLI13_RS02380 PF00970 Oxidoreductase FAD-binding domain LLI13_RS02440 PF12833 Helix-turn-helix domain LLI13_RS02440 PF01965 DJ-1/PfpI family LLI13_RS02450 PF00005 ABC transporter LLI13_RS02450 PF00664 ABC transporter transmembrane region LLI13_RS02455 PF00248 Aldo/keto reductase family LLI13_RS02460 PF06983 3-demethylubiquinone-9 3-methyltransferase LLI13_RS02465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS02465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS02490 PF03633 Glycosyl hydrolase family 65, C-terminal domain LLI13_RS02490 PF03632 Glycosyl hydrolase family 65 central catalytic domain LLI13_RS02490 PF03636 Glycosyl hydrolase family 65, N-terminal domain LLI13_RS02495 PF13419 Haloacid dehalogenase-like hydrolase LLI13_RS02540 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS02555 PF13649 Methyltransferase domain LLI13_RS02560 PF00155 Aminotransferase class I and II LLI13_RS02565 PF02983 Alpha-lytic protease prodomain LLI13_RS02565 PF00089 Trypsin LLI13_RS02595 PF00107 Zinc-binding dehydrogenase LLI13_RS02595 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS02600 PF00005 ABC transporter LLI13_RS02600 PF00664 ABC transporter transmembrane region LLI13_RS02625 PF07732 Multicopper oxidase LLI13_RS02625 PF07731 Multicopper oxidase LLI13_RS02635 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LLI13_RS02635 PF00535 Glycosyl transferase family 2 LLI13_RS02645 PF00483 Nucleotidyl transferase LLI13_RS02660 PF00089 Trypsin LLI13_RS02660 PF02983 Alpha-lytic protease prodomain LLI13_RS02675 PF00664 ABC transporter transmembrane region LLI13_RS02675 PF03412 Peptidase C39 family LLI13_RS02675 PF00005 ABC transporter LLI13_RS02680 PF00005 ABC transporter LLI13_RS02680 PF00664 ABC transporter transmembrane region LLI13_RS02690 PF02541 Ppx/GppA phosphatase family LLI13_RS02695 PF01566 Natural resistance-associated macrophage protein LLI13_RS02695 PF03358 NADPH-dependent FMN reductase LLI13_RS02705 PF05175 Methyltransferase small domain LLI13_RS02705 PF17827 PrmC N-terminal domain LLI13_RS02720 PF00720 Subtilisin inhibitor-like LLI13_RS02730 PF01070 FMN-dependent dehydrogenase LLI13_RS02750 PF02927 Cellulase N-terminal ig-like domain LLI13_RS02750 PF02018 Carbohydrate binding domain LLI13_RS02750 PF00759 Glycosyl hydrolase family 9 LLI13_RS02755 PF13581 Histidine kinase-like ATPase domain LLI13_RS02755 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS02755 PF13466 STAS domain LLI13_RS02755 PF08448 PAS fold LLI13_RS02765 PF00248 Aldo/keto reductase family LLI13_RS02775 PF04075 F420H(2)-dependent quinone reductase LLI13_RS02785 PF13409 Glutathione S-transferase, N-terminal domain LLI13_RS02820 PF14716 Helix-hairpin-helix domain LLI13_RS02820 PF14791 DNA polymerase beta thumb LLI13_RS02820 PF02811 PHP domain LLI13_RS02825 PF13419 Haloacid dehalogenase-like hydrolase LLI13_RS02835 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS02845 PF00480 ROK family LLI13_RS02845 PF01047 MarR family LLI13_RS02865 PF10282 Lactonase, 7-bladed beta-propeller LLI13_RS02875 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS02875 PF08362 YcdC-like protein, C-terminal region LLI13_RS02880 PF00258 Flavodoxin LLI13_RS02880 PF00175 Oxidoreductase NAD-binding domain LLI13_RS02880 PF00667 FAD binding domain LLI13_RS02880 PF00067 Cytochrome P450 LLI13_RS02895 PF00561 alpha/beta hydrolase fold LLI13_RS02900 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS02905 PF05336 L-rhamnose mutarotase LLI13_RS02910 PF13407 Periplasmic binding protein domain LLI13_RS02915 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS02920 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS02925 PF00005 ABC transporter LLI13_RS02930 PF01261 Xylose isomerase-like TIM barrel LLI13_RS02935 PF00596 Class II Aldolase and Adducin N-terminal domain LLI13_RS02940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LLI13_RS02940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LLI13_RS02945 PF02754 Cysteine-rich domain LLI13_RS02950 PF02589 LUD domain LLI13_RS02950 PF11870 Domain of unknown function (DUF3390) LLI13_RS02950 PF13183 4Fe-4S dicluster domain LLI13_RS02955 PF02589 LUD domain LLI13_RS02960 PF12704 MacB-like periplasmic core domain LLI13_RS02960 PF00005 ABC transporter LLI13_RS02960 PF02687 FtsX-like permease family LLI13_RS02970 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS02970 PF10431 C-terminal, D2-small domain, of ClpB protein LLI13_RS02970 PF02861 Clp amino terminal domain, pathogenicity island component LLI13_RS02970 PF17871 AAA lid domain LLI13_RS02970 PF07724 AAA domain (Cdc48 subfamily) LLI13_RS02995 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS03005 PF08281 Sigma-70, region 4 LLI13_RS03005 PF04542 Sigma-70 region 2 LLI13_RS03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS03020 PF07730 Histidine kinase LLI13_RS03025 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS03025 PF00072 Response regulator receiver domain LLI13_RS03040 PF01327 Polypeptide deformylase LLI13_RS03045 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS03045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLI13_RS03050 PF00085 Thioredoxin LLI13_RS03055 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS03065 PF03358 NADPH-dependent FMN reductase LLI13_RS03075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LLI13_RS03075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LLI13_RS03080 PF03450 CO dehydrogenase flavoprotein C-terminal domain LLI13_RS03080 PF00941 FAD binding domain in molybdopterin dehydrogenase LLI13_RS03085 PF00111 2Fe-2S iron-sulfur cluster binding domain LLI13_RS03085 PF01799 [2Fe-2S] binding domain LLI13_RS03085 PF10518 TAT (twin-arginine translocation) pathway signal sequence LLI13_RS03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS03095 PF03466 LysR substrate binding domain LLI13_RS03105 PF02515 CoA-transferase family III LLI13_RS03110 PF00156 Phosphoribosyl transferase domain LLI13_RS03110 PF01738 Dienelactone hydrolase family LLI13_RS03115 PF01951 Archease protein family (MTH1598/TM1083) LLI13_RS03125 PF01161 Phosphatidylethanolamine-binding protein LLI13_RS03130 PF00571 CBS domain LLI13_RS03145 PF00857 Isochorismatase family LLI13_RS03170 PF04107 Glutamate-cysteine ligase family 2(GCS2) LLI13_RS03175 PF03781 Sulfatase-modifying factor enzyme 1 LLI13_RS03175 PF12867 DinB superfamily LLI13_RS03185 PF10017 Histidine-specific methyltransferase, SAM-dependent LLI13_RS03190 PF01547 Bacterial extracellular solute-binding protein LLI13_RS03195 PF07311 Dodecin LLI13_RS03205 PF11181 Heat induced stress protein YflT LLI13_RS03205 PF09557 Domain of unknown function (DUF2382) LLI13_RS03210 PF01553 Acyltransferase LLI13_RS03220 PF13085 2Fe-2S iron-sulfur cluster binding domain LLI13_RS03225 PF00890 FAD binding domain LLI13_RS03225 PF02910 Fumarate reductase flavoprotein C-term LLI13_RS03235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS03235 PF03466 LysR substrate binding domain LLI13_RS03245 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain LLI13_RS03245 PF01522 Polysaccharide deacetylase LLI13_RS03280 PF00563 EAL domain LLI13_RS03280 PF03707 Bacterial signalling protein N terminal repeat LLI13_RS03280 PF00990 Diguanylate cyclase, GGDEF domain LLI13_RS03295 PF04542 Sigma-70 region 2 LLI13_RS03295 PF04545 Sigma-70, region 4 LLI13_RS03310 PF06827 Zinc finger found in FPG and IleRS LLI13_RS03310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LLI13_RS03345 PF00106 short chain dehydrogenase LLI13_RS03350 PF06974 Protein of unknown function (DUF1298) LLI13_RS03350 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LLI13_RS03355 PF00483 Nucleotidyl transferase LLI13_RS03360 PF13439 Glycosyltransferase Family 4 LLI13_RS03360 PF00534 Glycosyl transferases group 1 LLI13_RS03375 PF06737 Transglycosylase-like domain LLI13_RS03380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LLI13_RS03380 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LLI13_RS03395 PF02261 Aspartate decarboxylase LLI13_RS03400 PF07690 Major Facilitator Superfamily LLI13_RS03410 PF00404 Dockerin type I domain LLI13_RS03410 PF03422 Carbohydrate binding module (family 6) LLI13_RS03410 PF00756 Putative esterase LLI13_RS03410 PF00331 Glycosyl hydrolase family 10 LLI13_RS03415 PF00652 Ricin-type beta-trefoil lectin domain LLI13_RS03415 PF00331 Glycosyl hydrolase family 10 LLI13_RS03420 PF03664 Glycosyl hydrolase family 62 LLI13_RS03420 PF00652 Ricin-type beta-trefoil lectin domain LLI13_RS03440 PF01494 FAD binding domain LLI13_RS03445 PF01557 Fumarylacetoacetate (FAA) hydrolase family LLI13_RS03450 PF13378 Enolase C-terminal domain-like LLI13_RS03450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LLI13_RS03460 PF00248 Aldo/keto reductase family LLI13_RS03475 PF02913 FAD linked oxidases, C-terminal domain LLI13_RS03475 PF01565 FAD binding domain LLI13_RS03475 PF13183 4Fe-4S dicluster domain LLI13_RS03480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLI13_RS03480 PF00205 Thiamine pyrophosphate enzyme, central domain LLI13_RS03480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS03485 PF13378 Enolase C-terminal domain-like LLI13_RS03485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LLI13_RS03495 PF00106 short chain dehydrogenase LLI13_RS03500 PF00199 Catalase LLI13_RS03500 PF06628 Catalase-related immune-responsive LLI13_RS03510 PF00270 DEAD/DEAH box helicase LLI13_RS03510 PF00271 Helicase conserved C-terminal domain LLI13_RS03515 PF00664 ABC transporter transmembrane region LLI13_RS03515 PF00005 ABC transporter LLI13_RS03520 PF03458 UPF0126 domain LLI13_RS03525 PF07687 Peptidase dimerisation domain LLI13_RS03525 PF01546 Peptidase family M20/M25/M40 LLI13_RS03530 PF04542 Sigma-70 region 2 LLI13_RS03530 PF08281 Sigma-70, region 4 LLI13_RS03530 PF12680 SnoaL-like domain LLI13_RS03560 PF00128 Alpha amylase, catalytic domain LLI13_RS03560 PF02806 Alpha amylase, C-terminal all-beta domain LLI13_RS03560 PF00686 Starch binding domain LLI13_RS03565 PF00128 Alpha amylase, catalytic domain LLI13_RS03565 PF03423 Carbohydrate binding domain (family 25) LLI13_RS03565 PF01373 Glycosyl hydrolase family 14 LLI13_RS03575 PF14310 Fibronectin type III-like domain LLI13_RS03575 PF00933 Glycosyl hydrolase family 3 N terminal domain LLI13_RS03575 PF01915 Glycosyl hydrolase family 3 C-terminal domain LLI13_RS03580 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS03585 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS03590 PF01547 Bacterial extracellular solute-binding protein LLI13_RS03595 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS03600 PF00232 Glycosyl hydrolase family 1 LLI13_RS03605 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS03610 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS03620 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS03635 PF00156 Phosphoribosyl transferase domain LLI13_RS03635 PF01738 Dienelactone hydrolase family LLI13_RS03640 PF00457 Glycosyl hydrolases family 11 LLI13_RS03640 PF01522 Polysaccharide deacetylase LLI13_RS03645 PF00457 Glycosyl hydrolases family 11 LLI13_RS03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS03670 PF07730 Histidine kinase LLI13_RS03675 PF00072 Response regulator receiver domain LLI13_RS03675 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS03685 PF07549 SecD/SecF GG Motif LLI13_RS03685 PF02355 Protein export membrane protein LLI13_RS03690 PF00664 ABC transporter transmembrane region LLI13_RS03690 PF00005 ABC transporter LLI13_RS03700 PF00924 Mechanosensitive ion channel LLI13_RS03705 PF03971 Monomeric isocitrate dehydrogenase LLI13_RS03725 PF00082 Subtilase family LLI13_RS03750 PF07690 Major Facilitator Superfamily LLI13_RS03755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLI13_RS03760 PF04303 PrpF protein LLI13_RS03765 PF03737 Aldolase/RraA LLI13_RS03770 PF02585 GlcNAc-PI de-N-acetylase LLI13_RS03775 PF07702 UTRA domain LLI13_RS03775 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS03780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS03780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS03785 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS03800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS03800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS03805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS03805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS03810 PF03786 D-mannonate dehydratase (UxuA) LLI13_RS03815 PF00005 ABC transporter LLI13_RS03820 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS03830 PF00294 pfkB family carbohydrate kinase LLI13_RS03840 PF04962 KduI/IolB family LLI13_RS03845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS03845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLI13_RS03845 PF00205 Thiamine pyrophosphate enzyme, central domain LLI13_RS03850 PF07702 UTRA domain LLI13_RS03850 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS03855 PF00248 Aldo/keto reductase family LLI13_RS03875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS03880 PF02571 Precorrin-6x reductase CbiJ/CobK LLI13_RS03895 PF00108 Thiolase, N-terminal domain LLI13_RS03895 PF02803 Thiolase, C-terminal domain LLI13_RS03900 PF00210 Ferritin-like domain LLI13_RS03925 PF00005 ABC transporter LLI13_RS03925 PF17912 MalK OB fold domain LLI13_RS03930 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS03935 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS03940 PF01547 Bacterial extracellular solute-binding protein LLI13_RS03950 PF00456 Transketolase, thiamine diphosphate binding domain LLI13_RS03955 PF02779 Transketolase, pyrimidine binding domain LLI13_RS03965 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS03965 PF08361 MAATS-type transcriptional repressor, C-terminal region LLI13_RS03970 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LLI13_RS03975 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LLI13_RS03980 PF00034 Cytochrome c LLI13_RS03980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LLI13_RS03980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LLI13_RS03985 PF01799 [2Fe-2S] binding domain LLI13_RS03985 PF00111 2Fe-2S iron-sulfur cluster binding domain LLI13_RS03990 PF01116 Fructose-bisphosphate aldolase class-II LLI13_RS03995 PF00294 pfkB family carbohydrate kinase LLI13_RS04000 PF01380 SIS domain LLI13_RS04005 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS04010 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS04015 PF01547 Bacterial extracellular solute-binding protein LLI13_RS04020 PF08220 DeoR-like helix-turn-helix domain LLI13_RS04020 PF00455 DeoR C terminal sensor domain LLI13_RS04030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS04035 PF00083 Sugar (and other) transporter LLI13_RS04055 PF00535 Glycosyl transferase family 2 LLI13_RS04055 PF00795 Carbon-nitrogen hydrolase LLI13_RS04065 PF01177 Asp/Glu/Hydantoin racemase LLI13_RS04070 PF00535 Glycosyl transferase family 2 LLI13_RS04075 PF02342 TerD domain LLI13_RS04090 PF17866 AAA lid domain LLI13_RS04090 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS04100 PF08220 DeoR-like helix-turn-helix domain LLI13_RS04100 PF00455 DeoR C terminal sensor domain LLI13_RS04105 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS04130 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LLI13_RS04130 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LLI13_RS04135 PF00480 ROK family LLI13_RS04140 PF13532 2OG-Fe(II) oxygenase superfamily LLI13_RS04145 PF05175 Methyltransferase small domain LLI13_RS04150 PF00723 Glycosyl hydrolases family 15 LLI13_RS04160 PF00403 Heavy-metal-associated domain LLI13_RS04165 PF01569 PAP2 superfamily LLI13_RS04175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS04175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS04195 PF01970 Tripartite tricarboxylate transporter TctA family LLI13_RS04200 PF00553 Cellulose binding domain LLI13_RS04200 PF01341 Glycosyl hydrolases family 6 LLI13_RS04205 PF00150 Cellulase (glycosyl hydrolase family 5) LLI13_RS04205 PF02013 Cellulose or protein binding domain LLI13_RS04220 PF07690 Major Facilitator Superfamily LLI13_RS04225 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS04225 PF00072 Response regulator receiver domain LLI13_RS04230 PF07730 Histidine kinase LLI13_RS04235 PF04324 BFD-like [2Fe-2S] binding domain LLI13_RS04235 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS04240 PF01546 Peptidase family M20/M25/M40 LLI13_RS04240 PF07687 Peptidase dimerisation domain LLI13_RS04255 PF00480 ROK family LLI13_RS04260 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS04280 PF01012 Electron transfer flavoprotein domain LLI13_RS04280 PF00766 Electron transfer flavoprotein FAD-binding domain LLI13_RS04285 PF01012 Electron transfer flavoprotein domain LLI13_RS04300 PF01553 Acyltransferase LLI13_RS04315 PF01212 Beta-eliminating lyase LLI13_RS04330 PF03009 Glycerophosphoryl diester phosphodiesterase family LLI13_RS04365 PF01569 PAP2 superfamily LLI13_RS04370 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS04390 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS04395 PF01022 Bacterial regulatory protein, arsR family LLI13_RS04400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LLI13_RS04405 PF03211 Pectate lyase LLI13_RS04415 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS04415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS04415 PF18158 Adaptive response protein AidB N-terminal domain LLI13_RS04425 PF03167 Uracil DNA glycosylase superfamily LLI13_RS04450 PF13419 Haloacid dehalogenase-like hydrolase LLI13_RS04485 PF00999 Sodium/hydrogen exchanger family LLI13_RS04485 PF02254 TrkA-N domain LLI13_RS04495 PF00582 Universal stress protein family LLI13_RS04505 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS04510 PF07690 Major Facilitator Superfamily LLI13_RS04520 PF01894 Uncharacterised protein family UPF0047 LLI13_RS04525 PF00743 Flavin-binding monooxygenase-like LLI13_RS04530 PF02618 YceG-like family LLI13_RS04535 PF00005 ABC transporter LLI13_RS04535 PF00664 ABC transporter transmembrane region LLI13_RS04545 PF00664 ABC transporter transmembrane region LLI13_RS04545 PF00005 ABC transporter LLI13_RS04550 PF00664 ABC transporter transmembrane region LLI13_RS04550 PF00005 ABC transporter LLI13_RS04560 PF01197 Ribosomal protein L31 LLI13_RS04570 PF08148 DSHCT (NUC185) domain LLI13_RS04570 PF00271 Helicase conserved C-terminal domain LLI13_RS04570 PF00270 DEAD/DEAH box helicase LLI13_RS04585 PF03259 Roadblock/LC7 domain LLI13_RS04595 PF08241 Methyltransferase domain LLI13_RS04625 PF12419 SNF2 Helicase protein LLI13_RS04625 PF00271 Helicase conserved C-terminal domain LLI13_RS04625 PF00176 SNF2 family N-terminal domain LLI13_RS04640 PF01261 Xylose isomerase-like TIM barrel LLI13_RS04645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LLI13_RS04645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LLI13_RS04650 PF00480 ROK family LLI13_RS04670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS04670 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS04670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS04675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS04675 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS04675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS04680 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS04680 PF00107 Zinc-binding dehydrogenase LLI13_RS04690 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS04695 PF04679 ATP dependent DNA ligase C terminal region LLI13_RS04695 PF01068 ATP dependent DNA ligase domain LLI13_RS04705 PF00171 Aldehyde dehydrogenase family LLI13_RS04720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS04720 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS04720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS04730 PF01327 Polypeptide deformylase LLI13_RS04735 PF08245 Mur ligase middle domain LLI13_RS04735 PF02875 Mur ligase family, glutamate ligase domain LLI13_RS04740 PF07685 CobB/CobQ-like glutamine amidotransferase domain LLI13_RS04745 PF00365 Phosphofructokinase LLI13_RS04750 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LLI13_RS04750 PF05425 Copper resistance protein D LLI13_RS04765 PF07694 5TMR of 5TMR-LYT LLI13_RS04765 PF06580 Histidine kinase LLI13_RS04770 PF00474 Sodium:solute symporter family LLI13_RS04780 PF04397 LytTr DNA-binding domain LLI13_RS04780 PF00072 Response regulator receiver domain LLI13_RS04785 PF01037 Lrp/AsnC ligand binding domain LLI13_RS04795 PF00202 Aminotransferase class-III LLI13_RS04800 PF13466 STAS domain LLI13_RS04800 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS04800 PF08448 PAS fold LLI13_RS04800 PF13581 Histidine kinase-like ATPase domain LLI13_RS04805 PF13581 Histidine kinase-like ATPase domain LLI13_RS04805 PF08448 PAS fold LLI13_RS04805 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS04805 PF13466 STAS domain LLI13_RS04810 PF02502 Ribose/Galactose Isomerase LLI13_RS04815 PF01553 Acyltransferase LLI13_RS04820 PF00561 alpha/beta hydrolase fold LLI13_RS04825 PF01774 UreD urease accessory protein LLI13_RS04830 PF02492 CobW/HypB/UreG, nucleotide-binding domain LLI13_RS04840 PF01979 Amidohydrolase family LLI13_RS04840 PF00449 Urease alpha-subunit, N-terminal domain LLI13_RS04845 PF00699 Urease beta subunit LLI13_RS04850 PF00547 Urease, gamma subunit LLI13_RS04860 PF00574 Clp protease LLI13_RS04870 PF00877 NlpC/P60 family LLI13_RS04890 PF00155 Aminotransferase class I and II LLI13_RS04895 PF06968 Biotin and Thiamin Synthesis associated domain LLI13_RS04895 PF04055 Radical SAM superfamily LLI13_RS04900 PF00202 Aminotransferase class-III LLI13_RS04910 PF01209 ubiE/COQ5 methyltransferase family LLI13_RS04925 PF00005 ABC transporter LLI13_RS04925 PF02687 FtsX-like permease family LLI13_RS04925 PF12704 MacB-like periplasmic core domain LLI13_RS04935 PF13508 Acetyltransferase (GNAT) domain LLI13_RS04935 PF00583 Acetyltransferase (GNAT) family LLI13_RS04940 PF01595 Cyclin M transmembrane N-terminal domain LLI13_RS04940 PF03471 Transporter associated domain LLI13_RS04940 PF00571 CBS domain LLI13_RS04945 PF00571 CBS domain LLI13_RS04945 PF01595 Cyclin M transmembrane N-terminal domain LLI13_RS05070 PF10397 Adenylosuccinate lyase C-terminus LLI13_RS05070 PF00206 Lyase LLI13_RS05075 PF03167 Uracil DNA glycosylase superfamily LLI13_RS05090 PF00005 ABC transporter LLI13_RS05095 PF07730 Histidine kinase LLI13_RS05100 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS05100 PF00072 Response regulator receiver domain LLI13_RS05105 PF00480 ROK family LLI13_RS05110 PF07702 UTRA domain LLI13_RS05110 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS05115 PF12680 SnoaL-like domain LLI13_RS05115 PF04542 Sigma-70 region 2 LLI13_RS05115 PF08281 Sigma-70, region 4 LLI13_RS05120 PF12697 Alpha/beta hydrolase family LLI13_RS05125 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS05140 PF01053 Cys/Met metabolism PLP-dependent enzyme LLI13_RS05165 PF13476 AAA domain LLI13_RS05170 PF00149 Calcineurin-like phosphoesterase LLI13_RS05170 PF12320 Type 5 capsule protein repressor C-terminal domain LLI13_RS05175 PF01205 Uncharacterized protein family UPF0029 LLI13_RS05175 PF09186 Domain of unknown function (DUF1949) LLI13_RS05180 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS05185 PF01406 tRNA synthetases class I (C) catalytic domain LLI13_RS05190 PF13380 CoA binding domain LLI13_RS05195 PF01022 Bacterial regulatory protein, arsR family LLI13_RS05200 PF01545 Cation efflux family LLI13_RS05200 PF16916 Dimerisation domain of Zinc Transporter LLI13_RS05215 PF00132 Bacterial transferase hexapeptide (six repeats) LLI13_RS05220 PF00132 Bacterial transferase hexapeptide (six repeats) LLI13_RS05225 PF09335 SNARE associated Golgi protein LLI13_RS05250 PF00009 Elongation factor Tu GTP binding domain LLI13_RS05250 PF03144 Elongation factor Tu domain 2 LLI13_RS05250 PF03143 Elongation factor Tu C-terminal domain LLI13_RS05270 PF02673 Bacitracin resistance protein BacA LLI13_RS05295 PF00795 Carbon-nitrogen hydrolase LLI13_RS05300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS05305 PF04978 Protein of unknown function (DUF664) LLI13_RS05320 PF03167 Uracil DNA glycosylase superfamily LLI13_RS05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS05380 PF03466 LysR substrate binding domain LLI13_RS05385 PF00892 EamA-like transporter family LLI13_RS05390 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS05390 PF00155 Aminotransferase class I and II LLI13_RS05415 PF03551 Transcriptional regulator PadR-like family LLI13_RS05420 PF02567 Phenazine biosynthesis-like protein LLI13_RS05445 PF01638 HxlR-like helix-turn-helix LLI13_RS05465 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS05470 PF03459 TOBE domain LLI13_RS05470 PF00005 ABC transporter LLI13_RS05475 PF02347 Glycine cleavage system P-protein LLI13_RS05485 PF11799 impB/mucB/samB family C-terminal domain LLI13_RS05485 PF00817 impB/mucB/samB family LLI13_RS05490 PF13411 MerR HTH family regulatory protein LLI13_RS05495 PF02577 Bifunctional nuclease LLI13_RS05500 PF00376 MerR family regulatory protein LLI13_RS05505 PF00498 FHA domain LLI13_RS05510 PF05949 Bacterial protein of unknown function (DUF881) LLI13_RS05515 PF06947 Protein of unknown function (DUF1290) LLI13_RS05520 PF05949 Bacterial protein of unknown function (DUF881) LLI13_RS05525 PF00483 Nucleotidyl transferase LLI13_RS05530 PF01066 CDP-alcohol phosphatidyltransferase LLI13_RS05550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LLI13_RS05555 PF00391 PEP-utilising enzyme, mobile domain LLI13_RS05555 PF02896 PEP-utilising enzyme, TIM barrel domain LLI13_RS05555 PF05524 PEP-utilising enzyme, N-terminal LLI13_RS05565 PF00501 AMP-binding enzyme LLI13_RS05565 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS05570 PF01055 Glycosyl hydrolases family 31 LLI13_RS05570 PF13802 Galactose mutarotase-like LLI13_RS05570 PF17137 Domain of unknown function (DUF5110) LLI13_RS05570 PF16338 Domain of unknown function (DUF4968) LLI13_RS05575 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LLI13_RS05575 PF09297 NADH pyrophosphatase zinc ribbon domain LLI13_RS05575 PF00293 NUDIX domain LLI13_RS05580 PF01427 D-ala-D-ala dipeptidase LLI13_RS05590 PF05378 Hydantoinase/oxoprolinase N-terminal region LLI13_RS05590 PF01968 Hydantoinase/oxoprolinase LLI13_RS05600 PF03259 Roadblock/LC7 domain LLI13_RS05615 PF09339 IclR helix-turn-helix domain LLI13_RS05615 PF01614 Bacterial transcriptional regulator LLI13_RS05640 PF07690 Major Facilitator Superfamily LLI13_RS05645 PF07286 Protein of unknown function (DUF1445) LLI13_RS05650 PF03746 LamB/YcsF family LLI13_RS05655 PF02682 Carboxyltransferase domain, subdomain C and D LLI13_RS05660 PF02626 Carboxyltransferase domain, subdomain A and B LLI13_RS05670 PF13579 Glycosyl transferase 4-like domain LLI13_RS05670 PF00534 Glycosyl transferases group 1 LLI13_RS05675 PF13439 Glycosyltransferase Family 4 LLI13_RS05675 PF00534 Glycosyl transferases group 1 LLI13_RS05685 PF12796 Ankyrin repeats (3 copies) LLI13_RS05685 PF00023 Ankyrin repeat LLI13_RS05700 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS05700 PF00155 Aminotransferase class I and II LLI13_RS05715 PF11700 Vacuole effluxer Atg22 like LLI13_RS05720 PF13397 RNA polymerase-binding protein LLI13_RS05725 PF04186 FxsA cytoplasmic membrane protein LLI13_RS05730 PF00535 Glycosyl transferase family 2 LLI13_RS05740 PF01037 Lrp/AsnC ligand binding domain LLI13_RS05750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS05750 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS05750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS05755 PF00553 Cellulose binding domain LLI13_RS05755 PF00041 Fibronectin type III domain LLI13_RS05755 PF00704 Glycosyl hydrolases family 18 LLI13_RS05780 PF17866 AAA lid domain LLI13_RS05780 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS05785 PF00571 CBS domain LLI13_RS05785 PF01595 Cyclin M transmembrane N-terminal domain LLI13_RS05790 PF03471 Transporter associated domain LLI13_RS05790 PF00571 CBS domain LLI13_RS05790 PF01595 Cyclin M transmembrane N-terminal domain LLI13_RS05800 PF08029 HisG, C-terminal domain LLI13_RS05800 PF01634 ATP phosphoribosyltransferase LLI13_RS05805 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LLI13_RS05810 PF00885 6,7-dimethyl-8-ribityllumazine synthase LLI13_RS05815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LLI13_RS05815 PF00925 GTP cyclohydrolase II LLI13_RS05820 PF04973 Nicotinamide mononucleotide transporter LLI13_RS05825 PF00677 Lumazine binding domain LLI13_RS05830 PF08338 Domain of unknown function (DUF1731) LLI13_RS05830 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS05835 PF00480 ROK family LLI13_RS05840 PF07690 Major Facilitator Superfamily LLI13_RS05850 PF00860 Permease family LLI13_RS05855 PF01341 Glycosyl hydrolases family 6 LLI13_RS05865 PF01593 Flavin containing amine oxidoreductase LLI13_RS05870 PF00795 Carbon-nitrogen hydrolase LLI13_RS05885 PF13520 Amino acid permease LLI13_RS05890 PF00571 CBS domain LLI13_RS05890 PF00478 IMP dehydrogenase / GMP reductase domain LLI13_RS05900 PF04198 Putative sugar-binding domain LLI13_RS05905 PF00834 Ribulose-phosphate 3 epimerase family LLI13_RS05910 PF03176 MMPL family LLI13_RS05915 PF01189 16S rRNA methyltransferase RsmB/F LLI13_RS05915 PF01029 NusB family LLI13_RS05920 PF02911 Formyl transferase, C-terminal domain LLI13_RS05920 PF00551 Formyl transferase LLI13_RS05930 PF17764 3′ DNA-binding domain (3′BD) LLI13_RS05935 PF02773 S-adenosylmethionine synthetase, C-terminal domain LLI13_RS05935 PF02772 S-adenosylmethionine synthetase, central domain LLI13_RS05935 PF00438 S-adenosylmethionine synthetase, N-terminal domain LLI13_RS05940 PF04127 DNA / pantothenate metabolism flavoprotein LLI13_RS05940 PF02441 Flavoprotein LLI13_RS05945 PF01192 RNA polymerase Rpb6 LLI13_RS05950 PF00625 Guanylate kinase LLI13_RS05960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LLI13_RS05965 PF01180 Dihydroorotate dehydrogenase LLI13_RS05970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLI13_RS05970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LLI13_RS05970 PF02142 MGS-like domain LLI13_RS05975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LLI13_RS05975 PF00117 Glutamine amidotransferase class-I LLI13_RS05985 PF01979 Amidohydrolase family LLI13_RS05990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LLI13_RS05990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LLI13_RS05995 PF00156 Phosphoribosyl transferase domain LLI13_RS06005 PF01029 NusB family LLI13_RS06010 PF08207 Elongation factor P (EF-P) KOW-like domain LLI13_RS06010 PF09285 Elongation factor P, C-terminal LLI13_RS06010 PF01132 Elongation factor P (EF-P) OB domain LLI13_RS06015 PF00557 Metallopeptidase family M24 LLI13_RS06015 PF01321 Creatinase/Prolidase N-terminal domain LLI13_RS06025 PF01761 3-dehydroquinate synthase LLI13_RS06030 PF01202 Shikimate kinase LLI13_RS06035 PF01264 Chorismate synthase LLI13_RS06045 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LLI13_RS06045 PF08501 Shikimate dehydrogenase substrate binding domain LLI13_RS06045 PF01488 Shikimate / quinate 5-dehydrogenase LLI13_RS06055 PF03652 Holliday junction resolvase LLI13_RS06060 PF02272 DHHA1 domain LLI13_RS06060 PF01411 tRNA synthetases class II (A) LLI13_RS06060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LLI13_RS06075 PF00163 Ribosomal protein S4/S9 N-terminal domain LLI13_RS06075 PF01479 S4 domain LLI13_RS06080 PF16193 AAA C-terminal domain LLI13_RS06080 PF12002 MgsA AAA+ ATPase C terminal LLI13_RS06080 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS06090 PF03129 Anticodon binding domain LLI13_RS06090 PF13393 Histidyl-tRNA synthetase LLI13_RS06095 PF00753 Metallo-beta-lactamase superfamily LLI13_RS06100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LLI13_RS06105 PF03993 Domain of Unknown Function (DUF349) LLI13_RS06110 PF13291 ACT domain LLI13_RS06110 PF04607 Region found in RelA / SpoT proteins LLI13_RS06110 PF02824 TGS domain LLI13_RS06115 PF00156 Phosphoribosyl transferase domain LLI13_RS06120 PF07549 SecD/SecF GG Motif LLI13_RS06120 PF02355 Protein export membrane protein LLI13_RS06125 PF02355 Protein export membrane protein LLI13_RS06125 PF07549 SecD/SecF GG Motif LLI13_RS06135 PF05496 Holliday junction DNA helicase RuvB P-loop domain LLI13_RS06135 PF05491 RuvB C-terminal winged helix domain LLI13_RS06135 PF17864 RuvB AAA lid domain LLI13_RS06140 PF07499 RuvA, C-terminal domain LLI13_RS06140 PF01330 RuvA N terminal domain LLI13_RS06145 PF02075 Crossover junction endodeoxyribonuclease RuvC LLI13_RS06150 PF01709 Transcriptional regulator LLI13_RS06155 PF01174 SNO glutamine amidotransferase family LLI13_RS06160 PF01680 SOR/SNZ family LLI13_RS06170 PF13439 Glycosyltransferase Family 4 LLI13_RS06175 PF03279 Bacterial lipid A biosynthesis acyltransferase LLI13_RS06180 PF01066 CDP-alcohol phosphatidyltransferase LLI13_RS06185 PF00679 Elongation factor G C-terminus LLI13_RS06185 PF03764 Elongation factor G, domain IV LLI13_RS06185 PF00009 Elongation factor Tu GTP binding domain LLI13_RS06185 PF03144 Elongation factor Tu domain 2 LLI13_RS06185 PF14492 Elongation Factor G, domain II LLI13_RS06195 PF01230 HIT domain LLI13_RS06200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LLI13_RS06200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LLI13_RS06200 PF03129 Anticodon binding domain LLI13_RS06215 PF00929 Exonuclease LLI13_RS06240 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS06245 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS06265 PF04686 Streptomyces sporulation and cell division protein, SsgA LLI13_RS06295 PF01063 Amino-transferase class IV LLI13_RS06300 PF04715 Anthranilate synthase component I, N terminal region LLI13_RS06300 PF00425 chorismate binding enzyme LLI13_RS06350 PF00069 Protein kinase domain LLI13_RS06350 PF00400 WD domain, G-beta repeat LLI13_RS06360 PF00005 ABC transporter LLI13_RS06360 PF03459 TOBE domain LLI13_RS06365 PF00999 Sodium/hydrogen exchanger family LLI13_RS06370 PF01678 Diaminopimelate epimerase LLI13_RS06375 PF13649 Methyltransferase domain LLI13_RS06380 PF03621 MbtH-like protein LLI13_RS06385 PF04820 Tryptophan halogenase LLI13_RS06390 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS06390 PF00550 Phosphopantetheine attachment site LLI13_RS06390 PF07993 Male sterility protein LLI13_RS06390 PF00501 AMP-binding enzyme LLI13_RS06390 PF00668 Condensation domain LLI13_RS06395 PF00550 Phosphopantetheine attachment site LLI13_RS06395 PF00668 Condensation domain LLI13_RS06395 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS06395 PF00501 AMP-binding enzyme LLI13_RS06400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS06400 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS06400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS06415 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS06415 PF00501 AMP-binding enzyme LLI13_RS06450 PF00296 Luciferase-like monooxygenase LLI13_RS06465 PF10114 Sensory domain found in PocR LLI13_RS06465 PF12833 Helix-turn-helix domain LLI13_RS06470 PF00588 SpoU rRNA Methylase family LLI13_RS06475 PF10414 Sirohaem synthase dimerisation region LLI13_RS06475 PF14824 Sirohaem biosynthesis protein central LLI13_RS06475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS06480 PF02277 Phosphoribosyltransferase LLI13_RS06485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS06495 PF03180 NLPA lipoprotein LLI13_RS06500 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS06505 PF09383 NIL domain LLI13_RS06505 PF00005 ABC transporter LLI13_RS06510 PF13419 Haloacid dehalogenase-like hydrolase LLI13_RS06535 PF03009 Glycerophosphoryl diester phosphodiesterase family LLI13_RS06540 PF00501 AMP-binding enzyme LLI13_RS06540 PF01553 Acyltransferase LLI13_RS06545 PF07690 Major Facilitator Superfamily LLI13_RS06560 PF14698 Argininosuccinate lyase C-terminal LLI13_RS06560 PF00206 Lyase LLI13_RS06565 PF00764 Arginosuccinate synthase LLI13_RS06585 PF00042 Globin LLI13_RS06585 PF00970 Oxidoreductase FAD-binding domain LLI13_RS06585 PF00175 Oxidoreductase NAD-binding domain LLI13_RS06600 PF02863 Arginine repressor, C-terminal domain LLI13_RS06600 PF01316 Arginine repressor, DNA binding domain LLI13_RS06605 PF00202 Aminotransferase class-III LLI13_RS06610 PF00696 Amino acid kinase family LLI13_RS06615 PF01960 ArgJ family LLI13_RS06620 PF02774 Semialdehyde dehydrogenase, dimerisation domain LLI13_RS06620 PF01118 Semialdehyde dehydrogenase, NAD binding domain LLI13_RS06630 PF07681 DoxX LLI13_RS06635 PF02018 Carbohydrate binding domain LLI13_RS06635 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LLI13_RS06660 PF00892 EamA-like transporter family LLI13_RS06670 PF02638 Glycosyl hydrolase-like 10 LLI13_RS06675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS06675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS06695 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LLI13_RS06695 PF01588 Putative tRNA binding domain LLI13_RS06695 PF03147 Ferredoxin-fold anticodon binding domain LLI13_RS06695 PF03484 tRNA synthetase B5 domain LLI13_RS06695 PF03483 B3/4 domain LLI13_RS06700 PF01409 tRNA synthetases class II core domain (F) LLI13_RS06700 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LLI13_RS06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS06705 PF00672 HAMP domain LLI13_RS06705 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS06705 PF00989 PAS fold LLI13_RS06705 PF18698 Histidine kinase sensor domain LLI13_RS06710 PF00588 SpoU rRNA Methylase family LLI13_RS06710 PF08032 RNA 2'-O ribose methyltransferase substrate binding LLI13_RS06715 PF00453 Ribosomal protein L20 LLI13_RS06720 PF01632 Ribosomal protein L35 LLI13_RS06725 PF05198 Translation initiation factor IF-3, N-terminal domain LLI13_RS06725 PF00707 Translation initiation factor IF-3, C-terminal domain LLI13_RS06745 PF00082 Subtilase family LLI13_RS06770 PF00171 Aldehyde dehydrogenase family LLI13_RS06775 PF03951 Glutamine synthetase, beta-Grasp domain LLI13_RS06775 PF00120 Glutamine synthetase, catalytic domain LLI13_RS06780 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS06780 PF07729 FCD domain LLI13_RS06785 PF13520 Amino acid permease LLI13_RS06790 PF07722 Peptidase C26 LLI13_RS06795 PF03466 LysR substrate binding domain LLI13_RS06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS06805 PF01497 Periplasmic binding protein LLI13_RS06810 PF01381 Helix-turn-helix LLI13_RS06815 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS06820 PF00571 CBS domain LLI13_RS06820 PF00005 ABC transporter LLI13_RS06825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LLI13_RS06825 PF01367 5'-3' exonuclease, C-terminal SAM fold LLI13_RS06830 PF08021 Siderophore-interacting FAD-binding domain LLI13_RS06830 PF04954 Siderophore-interacting protein LLI13_RS06840 PF00849 RNA pseudouridylate synthase LLI13_RS06845 PF00067 Cytochrome P450 LLI13_RS06870 PF00270 DEAD/DEAH box helicase LLI13_RS06870 PF08148 DSHCT (NUC185) domain LLI13_RS06870 PF00271 Helicase conserved C-terminal domain LLI13_RS06875 PF00781 Diacylglycerol kinase catalytic domain LLI13_RS06880 PF00902 Sec-independent protein translocase protein (TatC) LLI13_RS06885 PF02416 mttA/Hcf106 family LLI13_RS06905 PF13280 WYL domain LLI13_RS06910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LLI13_RS06915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LLI13_RS06915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LLI13_RS06920 PF03136 Pup-ligase protein LLI13_RS06930 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS06935 PF00227 Proteasome subunit LLI13_RS06940 PF00227 Proteasome subunit LLI13_RS06950 PF05639 Pup-like protein LLI13_RS06955 PF03136 Pup-ligase protein LLI13_RS06960 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS06960 PF16450 Proteasomal ATPase OB C-terminal domain LLI13_RS06960 PF17758 Proteasomal ATPase OB N-terminal domain LLI13_RS06975 PF08704 tRNA methyltransferase complex GCD14 subunit LLI13_RS06980 PF02163 Peptidase family M50 LLI13_RS06980 PF00571 CBS domain LLI13_RS06990 PF00072 Response regulator receiver domain LLI13_RS06990 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS06995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLI13_RS07000 PF13419 Haloacid dehalogenase-like hydrolase LLI13_RS07005 PF00809 Pterin binding enzyme LLI13_RS07005 PF02965 Vitamin B12 dependent methionine synthase, activation domain LLI13_RS07005 PF02607 B12 binding domain LLI13_RS07005 PF02310 B12 binding domain LLI13_RS07005 PF02574 Homocysteine S-methyltransferase LLI13_RS07010 PF01614 Bacterial transcriptional regulator LLI13_RS07010 PF09339 IclR helix-turn-helix domain LLI13_RS07015 PF00230 Major intrinsic protein LLI13_RS07020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LLI13_RS07020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LLI13_RS07025 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LLI13_RS07025 PF01266 FAD dependent oxidoreductase LLI13_RS07030 PF07729 FCD domain LLI13_RS07030 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS07040 PF01406 tRNA synthetases class I (C) catalytic domain LLI13_RS07055 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS07060 PF01544 CorA-like Mg2+ transporter protein LLI13_RS07070 PF00296 Luciferase-like monooxygenase LLI13_RS07075 PF00248 Aldo/keto reductase family LLI13_RS07095 PF03777 ChpA-C LLI13_RS07100 PF03777 ChpA-C LLI13_RS07105 PF07687 Peptidase dimerisation domain LLI13_RS07105 PF01546 Peptidase family M20/M25/M40 LLI13_RS07120 PF07729 FCD domain LLI13_RS07120 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS07135 PF02447 GntP family permease LLI13_RS07160 PF00293 NUDIX domain LLI13_RS07165 PF02656 Domain of unknown function (DUF202) LLI13_RS07175 PF00107 Zinc-binding dehydrogenase LLI13_RS07175 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS07180 PF01636 Phosphotransferase enzyme family LLI13_RS07185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS07185 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS07185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS07195 PF03466 LysR substrate binding domain LLI13_RS07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS07200 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS07200 PF08361 MAATS-type transcriptional repressor, C-terminal region LLI13_RS07205 PF00106 short chain dehydrogenase LLI13_RS07210 PF07075 Protein of unknown function (DUF1343) LLI13_RS07220 PF09278 MerR, DNA binding LLI13_RS07220 PF00376 MerR family regulatory protein LLI13_RS07225 PF01575 MaoC like domain LLI13_RS07240 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS07240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS07240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS07255 PF00107 Zinc-binding dehydrogenase LLI13_RS07255 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS07260 PF00171 Aldehyde dehydrogenase family LLI13_RS07265 PF00005 ABC transporter LLI13_RS07265 PF17912 MalK OB fold domain LLI13_RS07275 PF03600 Citrate transporter LLI13_RS07280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LLI13_RS07280 PF00384 Molybdopterin oxidoreductase LLI13_RS07280 PF01568 Molydopterin dinucleotide binding domain LLI13_RS07285 PF17925 Tetracyclin repressor-like, C-terminal domain LLI13_RS07285 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS07295 PF04209 homogentisate 1,2-dioxygenase LLI13_RS07300 PF07702 UTRA domain LLI13_RS07300 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS07315 PF00005 ABC transporter LLI13_RS07315 PF13732 Domain of unknown function (DUF4162) LLI13_RS07320 PF01061 ABC-2 type transporter LLI13_RS07330 PF10099 Anti-sigma-K factor rskA LLI13_RS07335 PF04542 Sigma-70 region 2 LLI13_RS07335 PF04545 Sigma-70, region 4 LLI13_RS07350 PF03824 High-affinity nickel-transport protein LLI13_RS07355 PF03793 PASTA domain LLI13_RS07355 PF00069 Protein kinase domain LLI13_RS07360 PF13472 GDSL-like Lipase/Acylhydrolase family LLI13_RS07365 PF00535 Glycosyl transferase family 2 LLI13_RS07375 PF14883 Hypothetical glycosyl hydrolase family 13 LLI13_RS07375 PF01522 Polysaccharide deacetylase LLI13_RS07390 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS07405 PF03551 Transcriptional regulator PadR-like family LLI13_RS07405 PF13847 Methyltransferase domain LLI13_RS07410 PF18416 N-acetylglucosamine binding protein domain 2 LLI13_RS07410 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LLI13_RS07435 PF07733 Bacterial DNA polymerase III alpha NTPase domain LLI13_RS07435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LLI13_RS07435 PF14579 Helix-hairpin-helix motif LLI13_RS07435 PF02811 PHP domain LLI13_RS07445 PF02983 Alpha-lytic protease prodomain LLI13_RS07445 PF00089 Trypsin LLI13_RS07450 PF00089 Trypsin LLI13_RS07450 PF02983 Alpha-lytic protease prodomain LLI13_RS07460 PF04472 Cell division protein SepF LLI13_RS07465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS07465 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS07465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS07470 PF07690 Major Facilitator Superfamily LLI13_RS07480 PF01569 PAP2 superfamily LLI13_RS07510 PF01926 50S ribosome-binding GTPase LLI13_RS07510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LLI13_RS07520 PF02224 Cytidylate kinase LLI13_RS07525 PF02153 Prephenate dehydrogenase LLI13_RS07540 PF03747 ADP-ribosylglycohydrolase LLI13_RS07550 PF00849 RNA pseudouridylate synthase LLI13_RS07550 PF01479 S4 domain LLI13_RS07555 PF04079 Segregation and condensation complex subunit ScpB LLI13_RS07560 PF02616 Segregation and condensation protein ScpA LLI13_RS07570 PF13614 AAA domain LLI13_RS07575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LLI13_RS07575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LLI13_RS07585 PF00293 NUDIX domain LLI13_RS07590 PF06418 CTP synthase N-terminus LLI13_RS07590 PF00117 Glutamine amidotransferase class-I LLI13_RS07595 PF00723 Glycosyl hydrolases family 15 LLI13_RS07605 PF00534 Glycosyl transferases group 1 LLI13_RS07605 PF13439 Glycosyltransferase Family 4 LLI13_RS07610 PF02463 RecF/RecN/SMC N terminal domain LLI13_RS07615 PF01513 ATP-NAD kinase LLI13_RS07620 PF01728 FtsJ-like methyltransferase LLI13_RS07620 PF01479 S4 domain LLI13_RS07635 PF00005 ABC transporter LLI13_RS07640 PF01032 FecCD transport family LLI13_RS07645 PF01032 FecCD transport family LLI13_RS07650 PF13344 Haloacid dehalogenase-like hydrolase LLI13_RS07650 PF18407 GCN5-related N-acetyltransferase like domain LLI13_RS07685 PF02245 Methylpurine-DNA glycosylase (MPG) LLI13_RS07695 PF01161 Phosphatidylethanolamine-binding protein LLI13_RS07705 PF01145 SPFH domain / Band 7 family LLI13_RS07715 PF00005 ABC transporter LLI13_RS07725 PF03777 ChpA-C LLI13_RS07730 PF00072 Response regulator receiver domain LLI13_RS07730 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS07735 PF07730 Histidine kinase LLI13_RS07735 PF05384 Sensor protein DegS LLI13_RS07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS07740 PF00106 short chain dehydrogenase LLI13_RS07745 PF02547 Queuosine biosynthesis protein LLI13_RS07755 PF00498 FHA domain LLI13_RS07755 PF00005 ABC transporter LLI13_RS07755 PF01061 ABC-2 type transporter LLI13_RS07770 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS07785 PF07729 FCD domain LLI13_RS07785 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS07800 PF01850 PIN domain LLI13_RS07820 PF00579 tRNA synthetases class I (W and Y) LLI13_RS07840 PF04055 Radical SAM superfamily LLI13_RS07840 PF06463 Molybdenum Cofactor Synthesis C LLI13_RS07845 PF00474 Sodium:solute symporter family LLI13_RS07855 PF00082 Subtilase family LLI13_RS07860 PF05922 Peptidase inhibitor I9 LLI13_RS07860 PF00082 Subtilase family LLI13_RS07865 PF02515 CoA-transferase family III LLI13_RS07875 PF03120 NAD-dependent DNA ligase OB-fold domain LLI13_RS07875 PF01653 NAD-dependent DNA ligase adenylation domain LLI13_RS07875 PF00533 BRCA1 C Terminus (BRCT) domain LLI13_RS07890 PF00474 Sodium:solute symporter family LLI13_RS07905 PF00723 Glycosyl hydrolases family 15 LLI13_RS07910 PF00106 short chain dehydrogenase LLI13_RS07940 PF03780 Asp23 family, cell envelope-related function LLI13_RS07950 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS07960 PF00005 ABC transporter LLI13_RS07960 PF16326 ABC transporter C-terminal domain LLI13_RS07960 PF12848 ABC transporter LLI13_RS07980 PF00596 Class II Aldolase and Adducin N-terminal domain LLI13_RS07985 PF01384 Phosphate transporter family LLI13_RS07995 PF03186 CobD/Cbib protein LLI13_RS08000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LLI13_RS08000 PF07685 CobB/CobQ-like glutamine amidotransferase domain LLI13_RS08005 PF02514 CobN/Magnesium Chelatase LLI13_RS08010 PF07728 AAA domain (dynein-related subfamily) LLI13_RS08010 PF17863 AAA lid domain LLI13_RS08010 PF13519 von Willebrand factor type A domain LLI13_RS08015 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LLI13_RS08020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LLI13_RS08020 PF07685 CobB/CobQ-like glutamine amidotransferase domain LLI13_RS08025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS08035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS08040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS08045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS08050 PF02570 Precorrin-8X methylmutase LLI13_RS08055 PF01903 CbiX LLI13_RS08060 PF00155 Aminotransferase class I and II LLI13_RS08070 PF01979 Amidohydrolase family LLI13_RS08075 PF00005 ABC transporter LLI13_RS08080 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS08085 PF00497 Bacterial extracellular solute-binding proteins, family 3 LLI13_RS08090 PF00266 Aminotransferase class-V LLI13_RS08095 PF00583 Acetyltransferase (GNAT) family LLI13_RS08100 PF00202 Aminotransferase class-III LLI13_RS08105 PF06339 Ectoine synthase LLI13_RS08110 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LLI13_RS08115 PF00266 Aminotransferase class-V LLI13_RS08135 PF07730 Histidine kinase LLI13_RS08140 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS08140 PF00072 Response regulator receiver domain LLI13_RS08145 PF00171 Aldehyde dehydrogenase family LLI13_RS08150 PF09339 IclR helix-turn-helix domain LLI13_RS08150 PF01614 Bacterial transcriptional regulator LLI13_RS08160 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS08165 PF04542 Sigma-70 region 2 LLI13_RS08165 PF08281 Sigma-70, region 4 LLI13_RS08175 PF03211 Pectate lyase LLI13_RS08180 PF03422 Carbohydrate binding module (family 6) LLI13_RS08180 PF04616 Glycosyl hydrolases family 43 LLI13_RS08190 PF01095 Pectinesterase LLI13_RS08195 PF00544 Pectate lyase LLI13_RS08200 PF13472 GDSL-like Lipase/Acylhydrolase family LLI13_RS08205 PF01547 Bacterial extracellular solute-binding protein LLI13_RS08210 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LLI13_RS08210 PF04616 Glycosyl hydrolases family 43 LLI13_RS08225 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS08230 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS08235 PF00920 Dehydratase family LLI13_RS08240 PF00701 Dihydrodipicolinate synthetase family LLI13_RS08245 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS08245 PF07729 FCD domain LLI13_RS08265 PF00701 Dihydrodipicolinate synthetase family LLI13_RS08270 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS08275 PF00455 DeoR C terminal sensor domain LLI13_RS08275 PF08220 DeoR-like helix-turn-helix domain LLI13_RS08285 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS08290 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS08295 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS08295 PF16912 Glucose dehydrogenase C-terminus LLI13_RS08300 PF02342 TerD domain LLI13_RS08305 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS08340 PF00701 Dihydrodipicolinate synthetase family LLI13_RS08350 PF04542 Sigma-70 region 2 LLI13_RS08350 PF08281 Sigma-70, region 4 LLI13_RS08355 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LLI13_RS08355 PF14602 Hexapeptide repeat of succinyl-transferase LLI13_RS08360 PF00893 Small Multidrug Resistance protein LLI13_RS08365 PF01883 Iron-sulfur cluster assembly protein LLI13_RS08370 PF01592 NifU-like N terminal domain LLI13_RS08375 PF00266 Aminotransferase class-V LLI13_RS08380 PF00005 ABC transporter LLI13_RS08385 PF00355 Rieske [2Fe-2S] domain LLI13_RS08390 PF01458 Uncharacterized protein family (UPF0051) LLI13_RS08395 PF01458 Uncharacterized protein family (UPF0051) LLI13_RS08405 PF00005 ABC transporter LLI13_RS08415 PF02628 Cytochrome oxidase assembly protein LLI13_RS08435 PF01040 UbiA prenyltransferase family LLI13_RS08440 PF00456 Transketolase, thiamine diphosphate binding domain LLI13_RS08440 PF02779 Transketolase, pyrimidine binding domain LLI13_RS08440 PF02780 Transketolase, C-terminal domain LLI13_RS08445 PF00923 Transaldolase/Fructose-6-phosphate aldolase LLI13_RS08450 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LLI13_RS08450 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LLI13_RS08460 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LLI13_RS08465 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS08470 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS08475 PF01547 Bacterial extracellular solute-binding protein LLI13_RS08480 PF00128 Alpha amylase, catalytic domain LLI13_RS08485 PF01547 Bacterial extracellular solute-binding protein LLI13_RS08490 PF03551 Transcriptional regulator PadR-like family LLI13_RS08490 PF10400 Virulence activator alpha C-term LLI13_RS08495 PF00005 ABC transporter LLI13_RS08495 PF02687 FtsX-like permease family LLI13_RS08495 PF12704 MacB-like periplasmic core domain LLI13_RS08510 PF00342 Phosphoglucose isomerase LLI13_RS08520 PF03840 Preprotein translocase SecG subunit LLI13_RS08525 PF00121 Triosephosphate isomerase LLI13_RS08530 PF00162 Phosphoglycerate kinase LLI13_RS08535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LLI13_RS08535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LLI13_RS08540 PF05547 Immune inhibitor A peptidase M6 LLI13_RS08540 PF00801 PKD domain LLI13_RS08545 PF02650 WhiA C-terminal HTH domain LLI13_RS08545 PF14527 WhiA LAGLIDADG-like domain LLI13_RS08545 PF10298 WhiA N-terminal LAGLIDADG-like domain LLI13_RS08550 PF01933 Uncharacterised protein family UPF0052 LLI13_RS08555 PF03668 P-loop ATPase protein family LLI13_RS08560 PF08459 UvrC Helix-hairpin-helix N-terminal LLI13_RS08560 PF02151 UvrB/uvrC motif LLI13_RS08560 PF01541 GIY-YIG catalytic domain LLI13_RS08575 PF00355 Rieske [2Fe-2S] domain LLI13_RS08580 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS08585 PF00294 pfkB family carbohydrate kinase LLI13_RS08590 PF17760 UvrA interaction domain LLI13_RS08590 PF17755 UvrA DNA-binding domain LLI13_RS08590 PF00005 ABC transporter LLI13_RS08600 PF00753 Metallo-beta-lactamase superfamily LLI13_RS08605 PF01220 Dehydroquinase class II LLI13_RS08610 PF01699 Sodium/calcium exchanger protein LLI13_RS08615 PF03741 Integral membrane protein TerC family LLI13_RS08620 PF02342 TerD domain LLI13_RS08625 PF02342 TerD domain LLI13_RS08630 PF12344 Ultra-violet resistance protein B LLI13_RS08630 PF02151 UvrB/uvrC motif LLI13_RS08630 PF00271 Helicase conserved C-terminal domain LLI13_RS08630 PF04851 Type III restriction enzyme, res subunit LLI13_RS08630 PF17757 UvrB interaction domain LLI13_RS08635 PF00563 EAL domain LLI13_RS08635 PF00990 Diguanylate cyclase, GGDEF domain LLI13_RS08635 PF03707 Bacterial signalling protein N terminal repeat LLI13_RS08640 PF03009 Glycerophosphoryl diester phosphodiesterase family LLI13_RS08645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LLI13_RS08645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LLI13_RS08655 PF04227 Indigoidine synthase A like protein LLI13_RS08665 PF00571 CBS domain LLI13_RS08680 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS08680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LLI13_RS08735 PF00082 Subtilase family LLI13_RS08735 PF05922 Peptidase inhibitor I9 LLI13_RS08760 PF01510 N-acetylmuramoyl-L-alanine amidase LLI13_RS08775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LLI13_RS08775 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS08785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LLI13_RS08785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LLI13_RS08790 PF00230 Major intrinsic protein LLI13_RS08795 PF00561 alpha/beta hydrolase fold LLI13_RS08800 PF03167 Uracil DNA glycosylase superfamily LLI13_RS08805 PF00163 Ribosomal protein S4/S9 N-terminal domain LLI13_RS08805 PF01479 S4 domain LLI13_RS08825 PF01121 Dephospho-CoA kinase LLI13_RS08835 PF00575 S1 RNA binding domain LLI13_RS08840 PF08241 Methyltransferase domain LLI13_RS08845 PF08482 ATP-dependent helicase C-terminal LLI13_RS08845 PF00271 Helicase conserved C-terminal domain LLI13_RS08845 PF00270 DEAD/DEAH box helicase LLI13_RS08845 PF04408 Helicase associated domain (HA2) LLI13_RS08865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LLI13_RS08865 PF00476 DNA polymerase family A LLI13_RS08865 PF01367 5'-3' exonuclease, C-terminal SAM fold LLI13_RS08870 PF01568 Molydopterin dinucleotide binding domain LLI13_RS08870 PF00384 Molybdopterin oxidoreductase LLI13_RS08875 PF03061 Thioesterase superfamily LLI13_RS08890 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS08895 PF11862 Domain of unknown function (DUF3382) LLI13_RS08895 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS08900 PF12399 Branched-chain amino acid ATP-binding cassette transporter LLI13_RS08900 PF00005 ABC transporter LLI13_RS08905 PF00005 ABC transporter LLI13_RS08910 PF00072 Response regulator receiver domain LLI13_RS08910 PF03861 ANTAR domain LLI13_RS08920 PF00224 Pyruvate kinase, barrel domain LLI13_RS08920 PF02887 Pyruvate kinase, alpha/beta domain LLI13_RS08930 PF00149 Calcineurin-like phosphoesterase LLI13_RS08930 PF02872 5'-nucleotidase, C-terminal domain LLI13_RS08935 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LLI13_RS08940 PF01433 Peptidase family M1 domain LLI13_RS08940 PF11838 ERAP1-like C-terminal domain LLI13_RS08945 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS08945 PF00072 Response regulator receiver domain LLI13_RS08950 PF02153 Prephenate dehydrogenase LLI13_RS08950 PF01817 Chorismate mutase type II LLI13_RS08960 PF10138 vWA found in TerF C terminus LLI13_RS08970 PF01374 Glycosyl hydrolase family 46 LLI13_RS08975 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS08975 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LLI13_RS08980 PF04898 Glutamate synthase central domain LLI13_RS08980 PF01645 Conserved region in glutamate synthase LLI13_RS08980 PF01493 GXGXG motif LLI13_RS08980 PF00310 Glutamine amidotransferases class-II LLI13_RS08990 PF03747 ADP-ribosylglycohydrolase LLI13_RS09010 PF02515 CoA-transferase family III LLI13_RS09015 PF03328 HpcH/HpaI aldolase/citrate lyase family LLI13_RS09020 PF01790 Prolipoprotein diacylglyceryl transferase LLI13_RS09030 PF00290 Tryptophan synthase alpha chain LLI13_RS09035 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS09040 PF00218 Indole-3-glycerol phosphate synthase LLI13_RS09060 PF04715 Anthranilate synthase component I, N terminal region LLI13_RS09060 PF00425 chorismate binding enzyme LLI13_RS09065 PF01502 Phosphoribosyl-AMP cyclohydrolase LLI13_RS09080 PF00977 Histidine biosynthesis protein LLI13_RS09085 PF01042 Endoribonuclease L-PSP LLI13_RS09090 PF00977 Histidine biosynthesis protein LLI13_RS09095 PF00117 Glutamine amidotransferase class-I LLI13_RS09105 PF00475 Imidazoleglycerol-phosphate dehydratase LLI13_RS09110 PF00155 Aminotransferase class I and II LLI13_RS09115 PF00815 Histidinol dehydrogenase LLI13_RS09140 PF04073 Aminoacyl-tRNA editing domain LLI13_RS09155 PF00005 ABC transporter LLI13_RS09155 PF13732 Domain of unknown function (DUF4162) LLI13_RS09160 PF01936 NYN domain LLI13_RS09175 PF14579 Helix-hairpin-helix motif LLI13_RS09175 PF07733 Bacterial DNA polymerase III alpha NTPase domain LLI13_RS09175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LLI13_RS09175 PF02811 PHP domain LLI13_RS09195 PF16655 PhoD-like phosphatase, N-terminal domain LLI13_RS09195 PF09423 PhoD-like phosphatase LLI13_RS09220 PF00999 Sodium/hydrogen exchanger family LLI13_RS09230 PF00849 RNA pseudouridylate synthase LLI13_RS09235 PF01252 Signal peptidase (SPase) II LLI13_RS09240 PF01258 Prokaryotic dksA/traR C4-type zinc finger LLI13_RS09245 PF00133 tRNA synthetases class I (I, L, M and V) LLI13_RS09245 PF08264 Anticodon-binding domain of tRNA LLI13_RS09250 PF05103 DivIVA protein LLI13_RS09260 PF04472 Cell division protein SepF LLI13_RS09265 PF01168 Alanine racemase, N-terminal domain LLI13_RS09270 PF02578 Multi-copper polyphenol oxidoreductase laccase LLI13_RS09275 PF12327 FtsZ family, C-terminal domain LLI13_RS09275 PF00091 Tubulin/FtsZ family, GTPase domain LLI13_RS09280 PF08478 POTRA domain, FtsQ-type LLI13_RS09285 PF03033 Glycosyltransferase family 28 N-terminal domain LLI13_RS09285 PF04101 Glycosyltransferase family 28 C-terminal domain LLI13_RS09290 PF01098 Cell cycle protein LLI13_RS09295 PF08245 Mur ligase middle domain LLI13_RS09295 PF02875 Mur ligase family, glutamate ligase domain LLI13_RS09300 PF00953 Glycosyl transferase family 4 LLI13_RS09300 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LLI13_RS09305 PF01225 Mur ligase family, catalytic domain LLI13_RS09305 PF02875 Mur ligase family, glutamate ligase domain LLI13_RS09305 PF08245 Mur ligase middle domain LLI13_RS09310 PF08245 Mur ligase middle domain LLI13_RS09310 PF01225 Mur ligase family, catalytic domain LLI13_RS09310 PF02875 Mur ligase family, glutamate ligase domain LLI13_RS09315 PF03717 Penicillin-binding Protein dimerisation domain LLI13_RS09315 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS09325 PF01795 MraW methylase family LLI13_RS09330 PF00484 Carbonic anhydrase LLI13_RS09335 PF07726 ATPase family associated with various cellular activities (AAA) LLI13_RS09335 PF17863 AAA lid domain LLI13_RS09365 PF00005 ABC transporter LLI13_RS09375 PF08359 YsiA-like protein, C-terminal region LLI13_RS09375 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS09380 PF01593 Flavin containing amine oxidoreductase LLI13_RS09390 PF02219 Methylenetetrahydrofolate reductase LLI13_RS09395 PF02581 Thiamine monophosphate synthase LLI13_RS09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS09405 PF14759 Reductase C-terminal LLI13_RS09415 PF05690 Thiazole biosynthesis protein ThiG LLI13_RS09415 PF01266 FAD dependent oxidoreductase LLI13_RS09425 PF05690 Thiazole biosynthesis protein ThiG LLI13_RS09430 PF00069 Protein kinase domain LLI13_RS09430 PF03793 PASTA domain LLI13_RS09435 PF01261 Xylose isomerase-like TIM barrel LLI13_RS09440 PF00174 Oxidoreductase molybdopterin binding domain LLI13_RS09445 PF00210 Ferritin-like domain LLI13_RS09455 PF01474 Class-II DAHP synthetase family LLI13_RS09460 PF00425 chorismate binding enzyme LLI13_RS09460 PF00117 Glutamine amidotransferase class-I LLI13_RS09465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LLI13_RS09465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLI13_RS09470 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS09470 PF00072 Response regulator receiver domain LLI13_RS09475 PF07730 Histidine kinase LLI13_RS09475 PF00672 HAMP domain LLI13_RS09475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS09485 PF12146 Serine aminopeptidase, S33 LLI13_RS09500 PF00480 ROK family LLI13_RS09505 PF17230 Family of unknown function (DUF5304) LLI13_RS09510 PF02374 Anion-transporting ATPase LLI13_RS09510 PF17886 HSP20-like domain found in ArsA LLI13_RS09525 PF00501 AMP-binding enzyme LLI13_RS09530 PF13439 Glycosyltransferase Family 4 LLI13_RS09530 PF00534 Glycosyl transferases group 1 LLI13_RS09545 PF00877 NlpC/P60 family LLI13_RS09550 PF01476 LysM domain LLI13_RS09550 PF00877 NlpC/P60 family LLI13_RS09550 PF08239 Bacterial SH3 domain LLI13_RS09575 PF00266 Aminotransferase class-V LLI13_RS09580 PF00591 Glycosyl transferase family, a/b domain LLI13_RS09580 PF02885 Glycosyl transferase family, helical bundle domain LLI13_RS09585 PF13631 Cytochrome b(N-terminal)/b6/petB LLI13_RS09590 PF00355 Rieske [2Fe-2S] domain LLI13_RS09595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LLI13_RS09595 PF00034 Cytochrome c LLI13_RS09600 PF00510 Cytochrome c oxidase subunit III LLI13_RS09610 PF03734 L,D-transpeptidase catalytic domain LLI13_RS09610 PF17964 Bacterial Ig domain LLI13_RS09615 PF12270 Cytochrome c oxidase subunit IV LLI13_RS09620 PF00115 Cytochrome C and Quinol oxidase polypeptide I LLI13_RS09625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LLI13_RS09630 PF00266 Aminotransferase class-V LLI13_RS09635 PF00294 pfkB family carbohydrate kinase LLI13_RS09650 PF01521 Iron-sulphur cluster biosynthesis LLI13_RS09655 PF02445 Quinolinate synthetase A protein LLI13_RS09660 PF00873 AcrB/AcrD/AcrF family LLI13_RS09665 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS09665 PF00072 Response regulator receiver domain LLI13_RS09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS09670 PF05384 Sensor protein DegS LLI13_RS09670 PF07730 Histidine kinase LLI13_RS09685 PF11241 Protein of unknown function (DUF3043) LLI13_RS09700 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LLI13_RS09710 PF02277 Phosphoribosyltransferase LLI13_RS09720 PF02654 Cobalamin-5-phosphate synthase LLI13_RS09735 PF02789 Cytosol aminopeptidase family, N-terminal domain LLI13_RS09735 PF00883 Cytosol aminopeptidase family, catalytic domain LLI13_RS09740 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS09740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLI13_RS09745 PF02817 e3 binding domain LLI13_RS09745 PF00364 Biotin-requiring enzyme LLI13_RS09745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LLI13_RS09750 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS09750 PF07729 FCD domain LLI13_RS09755 PF00456 Transketolase, thiamine diphosphate binding domain LLI13_RS09755 PF17831 Pyruvate dehydrogenase E1 component middle domain LLI13_RS09780 PF02674 Colicin V production protein LLI13_RS09790 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS09790 PF08338 Domain of unknown function (DUF1731) LLI13_RS09795 PF01593 Flavin containing amine oxidoreductase LLI13_RS09810 PF04055 Radical SAM superfamily LLI13_RS09810 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LLI13_RS09820 PF13829 Domain of unknown function (DUF4191) LLI13_RS09830 PF03951 Glutamine synthetase, beta-Grasp domain LLI13_RS09830 PF00120 Glutamine synthetase, catalytic domain LLI13_RS09840 PF01435 Peptidase family M48 LLI13_RS09855 PF03960 ArsC family LLI13_RS09865 PF03951 Glutamine synthetase, beta-Grasp domain LLI13_RS09865 PF00120 Glutamine synthetase, catalytic domain LLI13_RS09870 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS09885 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS09885 PF00072 Response regulator receiver domain LLI13_RS09910 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS09925 PF00128 Alpha amylase, catalytic domain LLI13_RS09925 PF03714 Bacterial pullanase-associated domain LLI13_RS09925 PF02806 Alpha amylase, C-terminal all-beta domain LLI13_RS09930 PF00128 Alpha amylase, catalytic domain LLI13_RS09930 PF02806 Alpha amylase, C-terminal all-beta domain LLI13_RS09935 PF00128 Alpha amylase, catalytic domain LLI13_RS09940 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS09945 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS09950 PF13416 Bacterial extracellular solute-binding protein LLI13_RS09955 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS09965 PF08335 GlnD PII-uridylyltransferase LLI13_RS09965 PF03710 Glutamate-ammonia ligase adenylyltransferase LLI13_RS09985 PF00544 Pectate lyase LLI13_RS09990 PF00120 Glutamine synthetase, catalytic domain LLI13_RS09990 PF03951 Glutamine synthetase, beta-Grasp domain LLI13_RS09995 PF02082 Transcriptional regulator LLI13_RS10010 PF02540 NAD synthase LLI13_RS10010 PF00795 Carbon-nitrogen hydrolase LLI13_RS10020 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS10020 PF16859 Tetracyclin repressor-like, C-terminal domain LLI13_RS10025 PF07690 Major Facilitator Superfamily LLI13_RS10030 PF02548 Ketopantoate hydroxymethyltransferase LLI13_RS10035 PF00005 ABC transporter LLI13_RS10035 PF13732 Domain of unknown function (DUF4162) LLI13_RS10045 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS10075 PF00557 Metallopeptidase family M24 LLI13_RS10080 PF01126 Heme oxygenase LLI13_RS10085 PF02567 Phenazine biosynthesis-like protein LLI13_RS10090 PF13473 Cupredoxin-like domain LLI13_RS10090 PF09375 Imelysin LLI13_RS10095 PF10518 TAT (twin-arginine translocation) pathway signal sequence LLI13_RS10095 PF04261 Dyp-type peroxidase family LLI13_RS10100 PF03239 Iron permease FTR1 family LLI13_RS10115 PF03009 Glycerophosphoryl diester phosphodiesterase family LLI13_RS10120 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS10135 PF00144 Beta-lactamase LLI13_RS10140 PF07690 Major Facilitator Superfamily LLI13_RS10145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS10145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS10160 PF00698 Acyl transferase domain LLI13_RS10165 PF01614 Bacterial transcriptional regulator LLI13_RS10165 PF09339 IclR helix-turn-helix domain LLI13_RS10170 PF03109 ABC1 family LLI13_RS10175 PF03176 MMPL family LLI13_RS10175 PF12823 Domain of unknown function (DUF3817) LLI13_RS10180 PF00348 Polyprenyl synthetase LLI13_RS10190 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS10195 PF01061 ABC-2 type transporter LLI13_RS10200 PF00005 ABC transporter LLI13_RS10200 PF13732 Domain of unknown function (DUF4162) LLI13_RS10215 PF07977 FabA-like domain LLI13_RS10220 PF07977 FabA-like domain LLI13_RS10225 PF00550 Phosphopantetheine attachment site LLI13_RS10235 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS10235 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS10240 PF02803 Thiolase, C-terminal domain LLI13_RS10240 PF00108 Thiolase, N-terminal domain LLI13_RS10245 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS10245 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS10250 PF00550 Phosphopantetheine attachment site LLI13_RS10255 PF01593 Flavin containing amine oxidoreductase LLI13_RS10275 PF14759 Reductase C-terminal LLI13_RS10275 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS10280 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS10280 PF00668 Condensation domain LLI13_RS10280 PF00975 Thioesterase domain LLI13_RS10280 PF00550 Phosphopantetheine attachment site LLI13_RS10280 PF00501 AMP-binding enzyme LLI13_RS10285 PF00975 Thioesterase domain LLI13_RS10285 PF00501 AMP-binding enzyme LLI13_RS10285 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS10285 PF00550 Phosphopantetheine attachment site LLI13_RS10285 PF00668 Condensation domain LLI13_RS10290 PF00106 short chain dehydrogenase LLI13_RS10295 PF00975 Thioesterase domain LLI13_RS10300 PF00975 Thioesterase domain LLI13_RS10300 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS10300 PF00668 Condensation domain LLI13_RS10300 PF00501 AMP-binding enzyme LLI13_RS10300 PF00550 Phosphopantetheine attachment site LLI13_RS10305 PF00668 Condensation domain LLI13_RS10305 PF00550 Phosphopantetheine attachment site LLI13_RS10305 PF00501 AMP-binding enzyme LLI13_RS10305 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS10310 PF00501 AMP-binding enzyme LLI13_RS10310 PF00668 Condensation domain LLI13_RS10310 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS10310 PF00668 Condensation domain LLI13_RS10310 PF00550 Phosphopantetheine attachment site LLI13_RS10310 PF00501 AMP-binding enzyme LLI13_RS10310 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS10310 PF00975 Thioesterase domain LLI13_RS10310 PF00550 Phosphopantetheine attachment site LLI13_RS10310 PF00975 Thioesterase domain LLI13_RS10315 PF00067 Cytochrome P450 LLI13_RS10320 PF06902 Divergent 4Fe-4S mono-cluster LLI13_RS10330 PF07977 FabA-like domain LLI13_RS10350 PF00550 Phosphopantetheine attachment site LLI13_RS10355 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS10355 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS10375 PF03621 MbtH-like protein LLI13_RS10380 PF03466 LysR substrate binding domain LLI13_RS10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS10390 PF01476 LysM domain LLI13_RS10400 PF00069 Protein kinase domain LLI13_RS10400 PF03793 PASTA domain LLI13_RS10405 PF00270 DEAD/DEAH box helicase LLI13_RS10405 PF09369 Domain of unknown function (DUF1998) LLI13_RS10405 PF00271 Helicase conserved C-terminal domain LLI13_RS10410 PF18337 RapA N-terminal Tudor like domain LLI13_RS10410 PF00176 SNF2 family N-terminal domain LLI13_RS10410 PF12137 RNA polymerase recycling family C-terminal LLI13_RS10410 PF18339 RapA N-terminal Tudor like domain 1 LLI13_RS10410 PF00271 Helicase conserved C-terminal domain LLI13_RS10415 PF12161 HsdM N-terminal domain LLI13_RS10415 PF02384 N-6 DNA Methylase LLI13_RS10430 PF01381 Helix-turn-helix LLI13_RS10450 PF13538 UvrD-like helicase C-terminal domain LLI13_RS10465 PF00067 Cytochrome P450 LLI13_RS10470 PF00067 Cytochrome P450 LLI13_RS10505 PF12852 Cupin LLI13_RS10505 PF12833 Helix-turn-helix domain LLI13_RS10520 PF03883 Peroxide stress protein YaaA LLI13_RS10525 PF01081 KDPG and KHG aldolase LLI13_RS10530 PF13456 Reverse transcriptase-like LLI13_RS10530 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS10540 PF01784 NIF3 (NGG1p interacting factor 3) LLI13_RS10555 PF01575 MaoC like domain LLI13_RS10560 PF07730 Histidine kinase LLI13_RS10560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS10565 PF00072 Response regulator receiver domain LLI13_RS10565 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS10570 PF07690 Major Facilitator Superfamily LLI13_RS10575 PF07690 Major Facilitator Superfamily LLI13_RS10605 PF08241 Methyltransferase domain LLI13_RS10610 PF13439 Glycosyltransferase Family 4 LLI13_RS10610 PF00534 Glycosyl transferases group 1 LLI13_RS10615 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS10615 PF17925 Tetracyclin repressor-like, C-terminal domain LLI13_RS10620 PF00652 Ricin-type beta-trefoil lectin domain LLI13_RS10620 PF00331 Glycosyl hydrolase family 10 LLI13_RS10640 PF00005 ABC transporter LLI13_RS10660 PF00083 Sugar (and other) transporter LLI13_RS10660 PF08946 Osmosensory transporter coiled coil LLI13_RS10665 PF01596 O-methyltransferase LLI13_RS10695 PF07690 Major Facilitator Superfamily LLI13_RS10705 PF13419 Haloacid dehalogenase-like hydrolase LLI13_RS10765 PF09335 SNARE associated Golgi protein LLI13_RS10775 PF11202 Phosphoribosyl transferase (PRTase) LLI13_RS10775 PF15608 PELOTA RNA binding domain LLI13_RS10790 PF02342 TerD domain LLI13_RS10800 PF02342 TerD domain LLI13_RS10805 PF02342 TerD domain LLI13_RS10810 PF00578 AhpC/TSA family LLI13_RS10815 PF11253 Protein of unknown function (DUF3052) LLI13_RS10820 PF17831 Pyruvate dehydrogenase E1 component middle domain LLI13_RS10820 PF00456 Transketolase, thiamine diphosphate binding domain LLI13_RS10830 PF07690 Major Facilitator Superfamily LLI13_RS10835 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS10835 PF17754 MftR C-terminal domain LLI13_RS10850 PF13411 MerR HTH family regulatory protein LLI13_RS10865 PF00082 Subtilase family LLI13_RS10865 PF05922 Peptidase inhibitor I9 LLI13_RS10885 PF17954 Quercetinase C-terminal cupin domain LLI13_RS10885 PF02678 Pirin LLI13_RS10890 PF17853 GGDEF-like domain LLI13_RS10890 PF13556 PucR C-terminal helix-turn-helix domain LLI13_RS10895 PF00698 Acyl transferase domain LLI13_RS10900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LLI13_RS10900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LLI13_RS10905 PF00550 Phosphopantetheine attachment site LLI13_RS10910 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS10910 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS10925 PF01263 Aldose 1-epimerase LLI13_RS10935 PF01810 LysE type translocator LLI13_RS10945 PF16884 N-terminal domain of oxidoreductase LLI13_RS10945 PF00107 Zinc-binding dehydrogenase LLI13_RS10960 PF13378 Enolase C-terminal domain-like LLI13_RS10960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LLI13_RS10965 PF00107 Zinc-binding dehydrogenase LLI13_RS10965 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS10975 PF13407 Periplasmic binding protein domain LLI13_RS10980 PF00005 ABC transporter LLI13_RS10985 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS10990 PF01263 Aldose 1-epimerase LLI13_RS10995 PF00155 Aminotransferase class I and II LLI13_RS11000 PF04616 Glycosyl hydrolases family 43 LLI13_RS11035 PF02470 MlaD protein LLI13_RS11060 PF02405 Permease MlaE LLI13_RS11070 PF00005 ABC transporter LLI13_RS11100 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LLI13_RS11105 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS11135 PF01494 FAD binding domain LLI13_RS11140 PF08450 SMP-30/Gluconolactonase/LRE-like region LLI13_RS11145 PF09339 IclR helix-turn-helix domain LLI13_RS11145 PF01614 Bacterial transcriptional regulator LLI13_RS11165 PF07729 FCD domain LLI13_RS11165 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS11175 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS11175 PF00501 AMP-binding enzyme LLI13_RS11180 PF01039 Carboxyl transferase domain LLI13_RS11180 PF17848 Acetyl-coA carboxylase zinc finger domain LLI13_RS11230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LLI13_RS11230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LLI13_RS11235 PF00664 ABC transporter transmembrane region LLI13_RS11235 PF00005 ABC transporter LLI13_RS11240 PF00005 ABC transporter LLI13_RS11240 PF00664 ABC transporter transmembrane region LLI13_RS11245 PF04542 Sigma-70 region 2 LLI13_RS11245 PF00140 Sigma-70 factor, region 1.2 LLI13_RS11245 PF04539 Sigma-70 region 3 LLI13_RS11245 PF04545 Sigma-70, region 4 LLI13_RS11250 PF13662 Toprim domain LLI13_RS11250 PF01807 CHC2 zinc finger LLI13_RS11250 PF08275 DNA primase catalytic core, N-terminal domain LLI13_RS11250 PF08278 DNA primase DnaG DnaB-binding LLI13_RS11250 PF10410 DnaB-helicase binding domain of primase LLI13_RS11255 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS11255 PF14759 Reductase C-terminal LLI13_RS11260 PF13286 Phosphohydrolase-associated domain LLI13_RS11260 PF01966 HD domain LLI13_RS11270 PF02698 DUF218 domain LLI13_RS11275 PF00384 Molybdopterin oxidoreductase LLI13_RS11275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LLI13_RS11275 PF01568 Molydopterin dinucleotide binding domain LLI13_RS11300 PF01638 HxlR-like helix-turn-helix LLI13_RS11315 PF01925 Sulfite exporter TauE/SafE LLI13_RS11320 PF04324 BFD-like [2Fe-2S] binding domain LLI13_RS11320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LLI13_RS11320 PF18267 Rubredoxin NAD+ reductase C-terminal domain LLI13_RS11320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LLI13_RS11320 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS11320 PF13806 Rieske-like [2Fe-2S] domain LLI13_RS11325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LLI13_RS11325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LLI13_RS11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS11325 PF18267 Rubredoxin NAD+ reductase C-terminal domain LLI13_RS11325 PF13806 Rieske-like [2Fe-2S] domain LLI13_RS11325 PF04324 BFD-like [2Fe-2S] binding domain LLI13_RS11345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LLI13_RS11345 PF02896 PEP-utilising enzyme, TIM barrel domain LLI13_RS11345 PF00391 PEP-utilising enzyme, mobile domain LLI13_RS11355 PF01207 Dihydrouridine synthase (Dus) LLI13_RS11360 PF07690 Major Facilitator Superfamily LLI13_RS11370 PF03129 Anticodon binding domain LLI13_RS11370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LLI13_RS11375 PF01297 Zinc-uptake complex component A periplasmic LLI13_RS11375 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LLI13_RS11380 PF00005 ABC transporter LLI13_RS11385 PF00950 ABC 3 transport family LLI13_RS11390 PF01475 Ferric uptake regulator family LLI13_RS11400 PF01255 Putative undecaprenyl diphosphate synthase LLI13_RS11405 PF02565 Recombination protein O C terminal LLI13_RS11405 PF11967 Recombination protein O N terminal LLI13_RS11440 PF00072 Response regulator receiver domain LLI13_RS11440 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS11445 PF07730 Histidine kinase LLI13_RS11450 PF03176 MMPL family LLI13_RS11495 PF08502 LeuA allosteric (dimerisation) domain LLI13_RS11495 PF00682 HMGL-like LLI13_RS11500 PF01447 Thermolysin metallopeptidase, catalytic domain LLI13_RS11500 PF16485 Protealysin propeptide LLI13_RS11500 PF02868 Thermolysin metallopeptidase, alpha-helical domain LLI13_RS11510 PF00232 Glycosyl hydrolase family 1 LLI13_RS11515 PF07650 KH domain LLI13_RS11515 PF01926 50S ribosome-binding GTPase LLI13_RS11525 PF04237 YjbR LLI13_RS11530 PF03471 Transporter associated domain LLI13_RS11530 PF00571 CBS domain LLI13_RS11530 PF01595 Cyclin M transmembrane N-terminal domain LLI13_RS11535 PF02130 Uncharacterized protein family UPF0054 LLI13_RS11540 PF02562 PhoH-like protein LLI13_RS11545 PF00294 pfkB family carbohydrate kinase LLI13_RS11550 PF13378 Enolase C-terminal domain-like LLI13_RS11550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LLI13_RS11555 PF09339 IclR helix-turn-helix domain LLI13_RS11555 PF01614 Bacterial transcriptional regulator LLI13_RS11565 PF00962 Adenosine/AMP deaminase LLI13_RS11570 PF12706 Beta-lactamase superfamily domain LLI13_RS11570 PF00753 Metallo-beta-lactamase superfamily LLI13_RS11575 PF01230 HIT domain LLI13_RS11580 PF14685 Tricorn protease PDZ domain LLI13_RS11580 PF07676 WD40-like Beta Propeller Repeat LLI13_RS11580 PF14684 Tricorn protease C1 domain LLI13_RS11580 PF03572 Peptidase family S41 LLI13_RS11590 PF04452 RNA methyltransferase LLI13_RS11595 PF03060 Nitronate monooxygenase LLI13_RS11600 PF00226 DnaJ domain LLI13_RS11600 PF01556 DnaJ C terminal domain LLI13_RS11600 PF00684 DnaJ central domain LLI13_RS11605 PF01628 HrcA protein C terminal domain LLI13_RS11620 PF04055 Radical SAM superfamily LLI13_RS11630 PF00501 AMP-binding enzyme LLI13_RS11635 PF06421 GTP-binding protein LepA C-terminus LLI13_RS11635 PF00679 Elongation factor G C-terminus LLI13_RS11635 PF00009 Elongation factor Tu GTP binding domain LLI13_RS11635 PF03144 Elongation factor Tu domain 2 LLI13_RS11640 PF01649 Ribosomal protein S20 LLI13_RS11655 PF00797 N-acetyltransferase LLI13_RS11660 PF12706 Beta-lactamase superfamily domain LLI13_RS11660 PF00753 Metallo-beta-lactamase superfamily LLI13_RS11670 PF02645 Uncharacterised protein, DegV family COG1307 LLI13_RS11680 PF08264 Anticodon-binding domain of tRNA LLI13_RS11680 PF09334 tRNA synthetases class I (M) LLI13_RS11680 PF13603 Leucyl-tRNA synthetase, Domain 2 LLI13_RS11690 PF10531 SLBB domain LLI13_RS11690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LLI13_RS11690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LLI13_RS11715 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS11730 PF01467 Cytidylyltransferase-like LLI13_RS11740 PF01435 Peptidase family M48 LLI13_RS11755 PF00171 Aldehyde dehydrogenase family LLI13_RS11765 PF00696 Amino acid kinase family LLI13_RS11765 PF01472 PUA domain LLI13_RS11780 PF00535 Glycosyl transferase family 2 LLI13_RS11790 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LLI13_RS11795 PF09423 PhoD-like phosphatase LLI13_RS11795 PF16655 PhoD-like phosphatase, N-terminal domain LLI13_RS11805 PF01926 50S ribosome-binding GTPase LLI13_RS11805 PF01018 GTP1/OBG LLI13_RS11805 PF09269 Domain of unknown function (DUF1967) LLI13_RS11810 PF01016 Ribosomal L27 protein LLI13_RS11815 PF00829 Ribosomal prokaryotic L21 protein LLI13_RS11820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LLI13_RS11825 PF04321 RmlD substrate binding domain LLI13_RS11830 PF16363 GDP-mannose 4,6 dehydratase LLI13_RS11835 PF00483 Nucleotidyl transferase LLI13_RS11840 PF10150 Ribonuclease E/G family LLI13_RS11865 PF01928 CYTH domain LLI13_RS11865 PF05235 CHAD domain LLI13_RS11870 PF01098 Cell cycle protein LLI13_RS11875 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS11895 PF00334 Nucleoside diphosphate kinase LLI13_RS11905 PF08245 Mur ligase middle domain LLI13_RS11905 PF02875 Mur ligase family, glutamate ligase domain LLI13_RS11915 PF10458 Valyl tRNA synthetase tRNA binding arm LLI13_RS11915 PF08264 Anticodon-binding domain of tRNA LLI13_RS11915 PF00133 tRNA synthetases class I (I, L, M and V) LLI13_RS11925 PF07724 AAA domain (Cdc48 subfamily) LLI13_RS11925 PF10431 C-terminal, D2-small domain, of ClpB protein LLI13_RS11925 PF06689 ClpX C4-type zinc finger LLI13_RS11930 PF00574 Clp protease LLI13_RS11935 PF00574 Clp protease LLI13_RS11940 PF05697 Bacterial trigger factor protein (TF) LLI13_RS11940 PF05698 Bacterial trigger factor protein (TF) C-terminus LLI13_RS11940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LLI13_RS11960 PF01757 Acyltransferase family LLI13_RS11975 PF13530 Sterol carrier protein domain LLI13_RS11975 PF17668 Acetyltransferase (GNAT) domain LLI13_RS11980 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LLI13_RS11980 PF06827 Zinc finger found in FPG and IleRS LLI13_RS11980 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LLI13_RS11985 PF02502 Ribose/Galactose Isomerase LLI13_RS11990 PF00324 Amino acid permease LLI13_RS12000 PF00324 Amino acid permease LLI13_RS12010 PF01323 DSBA-like thioredoxin domain LLI13_RS12015 PF01433 Peptidase family M1 domain LLI13_RS12015 PF11838 ERAP1-like C-terminal domain LLI13_RS12035 PF00082 Subtilase family LLI13_RS12045 PF04542 Sigma-70 region 2 LLI13_RS12045 PF04545 Sigma-70, region 4 LLI13_RS12050 PF01118 Semialdehyde dehydrogenase, NAD binding domain LLI13_RS12050 PF02774 Semialdehyde dehydrogenase, dimerisation domain LLI13_RS12065 PF01433 Peptidase family M1 domain LLI13_RS12065 PF11838 ERAP1-like C-terminal domain LLI13_RS12070 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS12080 PF00892 EamA-like transporter family LLI13_RS12085 PF01047 MarR family LLI13_RS12095 PF02446 4-alpha-glucanotransferase LLI13_RS12105 PF02838 Glycosyl hydrolase family 20, domain 2 LLI13_RS12105 PF00963 Cohesin domain LLI13_RS12105 PF00754 F5/8 type C domain LLI13_RS12105 PF00041 Fibronectin type III domain LLI13_RS12105 PF07555 beta-N-acetylglucosaminidase LLI13_RS12115 PF00005 ABC transporter LLI13_RS12130 PF00924 Mechanosensitive ion channel LLI13_RS12140 PF02056 Family 4 glycosyl hydrolase LLI13_RS12140 PF11975 Family 4 glycosyl hydrolase C-terminal domain LLI13_RS12155 PF00497 Bacterial extracellular solute-binding proteins, family 3 LLI13_RS12165 PF16918 Protein kinase G tetratricopeptide repeat LLI13_RS12165 PF16919 Protein kinase G rubredoxin domain LLI13_RS12165 PF00069 Protein kinase domain LLI13_RS12190 PF01152 Bacterial-like globin LLI13_RS12205 PF00005 ABC transporter LLI13_RS12220 PF00005 ABC transporter LLI13_RS12220 PF12848 ABC transporter LLI13_RS12245 PF00436 Single-strand binding protein family LLI13_RS12290 PF03777 ChpA-C LLI13_RS12295 PF00264 Common central domain of tyrosinase LLI13_RS12300 PF06236 Tyrosinase co-factor MelC1 LLI13_RS12320 PF13579 Glycosyl transferase 4-like domain LLI13_RS12320 PF00534 Glycosyl transferases group 1 LLI13_RS12325 PF02397 Bacterial sugar transferase LLI13_RS12335 PF03023 Lipid II flippase MurJ LLI13_RS12345 PF00534 Glycosyl transferases group 1 LLI13_RS12345 PF13439 Glycosyltransferase Family 4 LLI13_RS12360 PF02222 ATP-grasp domain LLI13_RS12360 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS12365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS12380 PF00005 ABC transporter LLI13_RS12385 PF00171 Aldehyde dehydrogenase family LLI13_RS12395 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS12395 PF00107 Zinc-binding dehydrogenase LLI13_RS12405 PF00403 Heavy-metal-associated domain LLI13_RS12410 PF00285 Citrate synthase, C-terminal domain LLI13_RS12415 PF14490 Helix-hairpin-helix containing domain LLI13_RS12415 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LLI13_RS12415 PF13538 UvrD-like helicase C-terminal domain LLI13_RS12460 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS12465 PF00005 ABC transporter LLI13_RS12470 PF13407 Periplasmic binding protein domain LLI13_RS12475 PF00294 pfkB family carbohydrate kinase LLI13_RS12480 PF05025 RbsD / FucU transport protein family LLI13_RS12495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS12495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS12500 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS12510 PF05977 Transmembrane secretion effector LLI13_RS12515 PF00892 EamA-like transporter family LLI13_RS12520 PF03466 LysR substrate binding domain LLI13_RS12520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS12525 PF01915 Glycosyl hydrolase family 3 C-terminal domain LLI13_RS12525 PF00933 Glycosyl hydrolase family 3 N terminal domain LLI13_RS12540 PF05576 PS-10 peptidase S37 LLI13_RS12550 PF00005 ABC transporter LLI13_RS12550 PF00664 ABC transporter transmembrane region LLI13_RS12555 PF04231 Endonuclease I LLI13_RS12565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS12565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLI13_RS12565 PF00205 Thiamine pyrophosphate enzyme, central domain LLI13_RS12570 PF00491 Arginase family LLI13_RS12580 PF15698 Phosphatase LLI13_RS12590 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS12590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS12590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS12595 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS12600 PF01039 Carboxyl transferase domain LLI13_RS12605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLI13_RS12605 PF02785 Biotin carboxylase C-terminal domain LLI13_RS12605 PF00364 Biotin-requiring enzyme LLI13_RS12605 PF00289 Biotin carboxylase, N-terminal domain LLI13_RS12610 PF00682 HMGL-like LLI13_RS12615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS12615 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS12615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS12625 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS12630 PF08924 Domain of unknown function (DUF1906) LLI13_RS12630 PF01471 Putative peptidoglycan binding domain LLI13_RS12650 PF00282 Pyridoxal-dependent decarboxylase conserved domain LLI13_RS12655 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LLI13_RS12665 PF06276 Ferric iron reductase FhuF-like transporter LLI13_RS12665 PF04183 IucA / IucC family LLI13_RS12680 PF01380 SIS domain LLI13_RS12685 PF00582 Universal stress protein family LLI13_RS12690 PF01965 DJ-1/PfpI family LLI13_RS12690 PF12833 Helix-turn-helix domain LLI13_RS12695 PF00929 Exonuclease LLI13_RS12705 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS12715 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS12720 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS12725 PF00232 Glycosyl hydrolase family 1 LLI13_RS12730 PF02839 Carbohydrate binding domain LLI13_RS12740 PF00072 Response regulator receiver domain LLI13_RS12740 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS12765 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS12810 PF03707 Bacterial signalling protein N terminal repeat LLI13_RS12810 PF00990 Diguanylate cyclase, GGDEF domain LLI13_RS12810 PF00563 EAL domain LLI13_RS12815 PF00296 Luciferase-like monooxygenase LLI13_RS12830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLI13_RS12830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LLI13_RS12835 PF01425 Amidase LLI13_RS12845 PF00497 Bacterial extracellular solute-binding proteins, family 3 LLI13_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS12855 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS12860 PF00005 ABC transporter LLI13_RS12870 PF18416 N-acetylglucosamine binding protein domain 2 LLI13_RS12870 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LLI13_RS12900 PF01341 Glycosyl hydrolases family 6 LLI13_RS12900 PF00553 Cellulose binding domain LLI13_RS12910 PF13344 Haloacid dehalogenase-like hydrolase LLI13_RS12915 PF00480 ROK family LLI13_RS12920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS12920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS12925 PF03928 Haem-degrading LLI13_RS12935 PF14849 YidC periplasmic domain LLI13_RS12935 PF02096 60Kd inner membrane protein LLI13_RS12960 PF12706 Beta-lactamase superfamily domain LLI13_RS12970 PF00145 C-5 cytosine-specific DNA methylase LLI13_RS12975 PF03852 DNA mismatch endonuclease Vsr LLI13_RS13020 PF01243 Pyridoxamine 5'-phosphate oxidase LLI13_RS13025 PF17925 Tetracyclin repressor-like, C-terminal domain LLI13_RS13025 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS13035 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS13040 PF12464 Maltose acetyltransferase LLI13_RS13040 PF14602 Hexapeptide repeat of succinyl-transferase LLI13_RS13065 PF07690 Major Facilitator Superfamily LLI13_RS13070 PF04286 Protein of unknown function (DUF445) LLI13_RS13080 PF08044 Domain of unknown function (DUF1707) LLI13_RS13085 PF00005 ABC transporter LLI13_RS13100 PF00912 Transglycosylase LLI13_RS13100 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS13105 PF00893 Small Multidrug Resistance protein LLI13_RS13120 PF00578 AhpC/TSA family LLI13_RS13140 PF01725 Ham1 family LLI13_RS13150 PF03725 3' exoribonuclease family, domain 2 LLI13_RS13150 PF01138 3' exoribonuclease family, domain 1 LLI13_RS13155 PF00367 phosphotransferase system, EIIB LLI13_RS13160 PF02378 Phosphotransferase system, EIIC LLI13_RS13165 PF02378 Phosphotransferase system, EIIC LLI13_RS13170 PF12706 Beta-lactamase superfamily domain LLI13_RS13180 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS13185 PF02597 ThiS family LLI13_RS13190 PF14464 Prokaryotic homologs of the JAB domain LLI13_RS13195 PF00324 Amino acid permease LLI13_RS13205 PF02617 ATP-dependent Clp protease adaptor protein ClpS LLI13_RS13210 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LLI13_RS13210 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LLI13_RS13215 PF00857 Isochorismatase family LLI13_RS13225 PF05547 Immune inhibitor A peptidase M6 LLI13_RS13225 PF00801 PKD domain LLI13_RS13245 PF02913 FAD linked oxidases, C-terminal domain LLI13_RS13245 PF01565 FAD binding domain LLI13_RS13255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLI13_RS13265 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS13270 PF00005 ABC transporter LLI13_RS13270 PF00571 CBS domain LLI13_RS13275 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS13280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LLI13_RS13295 PF04851 Type III restriction enzyme, res subunit LLI13_RS13300 PF02661 Fic/DOC family LLI13_RS13310 PF07690 Major Facilitator Superfamily LLI13_RS13330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LLI13_RS13330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LLI13_RS13335 PF00111 2Fe-2S iron-sulfur cluster binding domain LLI13_RS13335 PF01799 [2Fe-2S] binding domain LLI13_RS13345 PF00728 Glycosyl hydrolase family 20, catalytic domain LLI13_RS13345 PF02838 Glycosyl hydrolase family 20, domain 2 LLI13_RS13345 PF07691 PA14 domain LLI13_RS13350 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS13355 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS13370 PF02622 Uncharacterized ACR, COG1678 LLI13_RS13375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LLI13_RS13380 PF00216 Bacterial DNA-binding protein LLI13_RS13385 PF00390 Malic enzyme, N-terminal domain LLI13_RS13385 PF03949 Malic enzyme, NAD binding domain LLI13_RS13390 PF13538 UvrD-like helicase C-terminal domain LLI13_RS13400 PF04542 Sigma-70 region 2 LLI13_RS13400 PF04545 Sigma-70, region 4 LLI13_RS13415 PF07690 Major Facilitator Superfamily LLI13_RS13455 PF07690 Major Facilitator Superfamily LLI13_RS13470 PF01522 Polysaccharide deacetylase LLI13_RS13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS13480 PF03466 LysR substrate binding domain LLI13_RS13490 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS13495 PF10503 Esterase PHB depolymerase LLI13_RS13505 PF01668 SmpB protein LLI13_RS13510 PF17820 PDZ domain LLI13_RS13510 PF01471 Putative peptidoglycan binding domain LLI13_RS13510 PF03572 Peptidase family S41 LLI13_RS13515 PF02687 FtsX-like permease family LLI13_RS13515 PF18075 FtsX extracellular domain LLI13_RS13520 PF00005 ABC transporter LLI13_RS13535 PF03462 PCRF domain LLI13_RS13535 PF00472 RF-1 domain LLI13_RS13540 PF00069 Protein kinase domain LLI13_RS13545 PF00069 Protein kinase domain LLI13_RS13550 PF01580 FtsK/SpoIIIE family LLI13_RS13560 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS13565 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS13570 PF00535 Glycosyl transferase family 2 LLI13_RS13570 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LLI13_RS13575 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LLI13_RS13580 PF00535 Glycosyl transferase family 2 LLI13_RS13595 PF02566 OsmC-like protein LLI13_RS13600 PF01047 MarR family LLI13_RS13605 PF00535 Glycosyl transferase family 2 LLI13_RS13610 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS13625 PF00005 ABC transporter LLI13_RS13625 PF01476 LysM domain LLI13_RS13630 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LLI13_RS13635 PF00535 Glycosyl transferase family 2 LLI13_RS13645 PF05088 Bacterial NAD-glutamate dehydrogenase LLI13_RS13665 PF07516 SecA Wing and Scaffold domain LLI13_RS13665 PF01043 SecA preprotein cross-linking domain LLI13_RS13665 PF07517 SecA DEAD-like domain LLI13_RS13675 PF06224 Winged helix DNA-binding domain LLI13_RS13680 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS13680 PF00072 Response regulator receiver domain LLI13_RS13685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LLI13_RS13685 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LLI13_RS13695 PF10647 Lipoprotein LpqB beta-propeller domain LLI13_RS13695 PF10646 Sporulation and spore germination LLI13_RS13700 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS13700 PF00672 HAMP domain LLI13_RS13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS13705 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS13705 PF00072 Response regulator receiver domain LLI13_RS13710 PF01008 Initiation factor 2 subunit family LLI13_RS13725 PF14258 Domain of unknown function (DUF4350) LLI13_RS13730 PF17863 AAA lid domain LLI13_RS13730 PF07726 ATPase family associated with various cellular activities (AAA) LLI13_RS13770 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LLI13_RS13770 PF05221 S-adenosyl-L-homocysteine hydrolase LLI13_RS13780 PF01238 Phosphomannose isomerase type I LLI13_RS13790 PF03966 Trm112p-like protein LLI13_RS13795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LLI13_RS13795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LLI13_RS13795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LLI13_RS13795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LLI13_RS13800 PF02652 L-lactate permease LLI13_RS13820 PF00534 Glycosyl transferases group 1 LLI13_RS13820 PF00535 Glycosyl transferase family 2 LLI13_RS13825 PF02467 Transcription factor WhiB LLI13_RS13835 PF01933 Uncharacterised protein family UPF0052 LLI13_RS13840 PF00881 Nitroreductase family LLI13_RS13840 PF01996 F420-0:Gamma-glutamyl ligase LLI13_RS13850 PF00483 Nucleotidyl transferase LLI13_RS13865 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS13870 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS13875 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS13875 PF13399 LytR cell envelope-related transcriptional attenuator LLI13_RS13880 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS13890 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS13900 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS13910 PF13396 Phospholipase_D-nuclease N-terminal LLI13_RS13910 PF13091 PLD-like domain LLI13_RS13915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS13915 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS13915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS13920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LLI13_RS13920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LLI13_RS13920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LLI13_RS13950 PF00731 AIR carboxylase LLI13_RS13955 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LLI13_RS13955 PF02222 ATP-grasp domain LLI13_RS13965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS13965 PF00672 HAMP domain LLI13_RS13965 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS13970 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS13970 PF00072 Response regulator receiver domain LLI13_RS13975 PF00854 POT family LLI13_RS13985 PF01740 STAS domain LLI13_RS13990 PF04539 Sigma-70 region 3 LLI13_RS13990 PF04542 Sigma-70 region 2 LLI13_RS13990 PF04545 Sigma-70, region 4 LLI13_RS13995 PF01979 Amidohydrolase family LLI13_RS14005 PF01546 Peptidase family M20/M25/M40 LLI13_RS14005 PF07687 Peptidase dimerisation domain LLI13_RS14010 PF17392 Urocanase C-terminal domain LLI13_RS14010 PF01175 Urocanase Rossmann-like domain LLI13_RS14010 PF17391 Urocanase N-terminal domain LLI13_RS14015 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LLI13_RS14015 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LLI13_RS14030 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS14040 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS14040 PF00571 CBS domain LLI13_RS14045 PF13472 GDSL-like Lipase/Acylhydrolase family LLI13_RS14050 PF00108 Thiolase, N-terminal domain LLI13_RS14050 PF02803 Thiolase, C-terminal domain LLI13_RS14085 PF02687 FtsX-like permease family LLI13_RS14085 PF12704 MacB-like periplasmic core domain LLI13_RS14085 PF00005 ABC transporter LLI13_RS14090 PF02687 FtsX-like permease family LLI13_RS14090 PF12704 MacB-like periplasmic core domain LLI13_RS14100 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS14105 PF02541 Ppx/GppA phosphatase family LLI13_RS14120 PF03952 Enolase, N-terminal domain LLI13_RS14120 PF00113 Enolase, C-terminal TIM barrel domain LLI13_RS14125 PF06737 Transglycosylase-like domain LLI13_RS14130 PF06737 Transglycosylase-like domain LLI13_RS14135 PF00067 Cytochrome P450 LLI13_RS14140 PF03819 MazG nucleotide pyrophosphohydrolase domain LLI13_RS14150 PF00069 Protein kinase domain LLI13_RS14150 PF03793 PASTA domain LLI13_RS14190 PF02559 CarD-like/TRCF domain LLI13_RS14190 PF00270 DEAD/DEAH box helicase LLI13_RS14190 PF00271 Helicase conserved C-terminal domain LLI13_RS14190 PF03461 TRCF domain LLI13_RS14190 PF17757 UvrB interaction domain LLI13_RS14195 PF02687 FtsX-like permease family LLI13_RS14195 PF12704 MacB-like periplasmic core domain LLI13_RS14200 PF00005 ABC transporter LLI13_RS14230 PF07730 Histidine kinase LLI13_RS14245 PF00132 Bacterial transferase hexapeptide (six repeats) LLI13_RS14245 PF12804 MobA-like NTP transferase domain LLI13_RS14250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LLI13_RS14250 PF14572 Phosphoribosyl synthetase-associated domain LLI13_RS14255 PF01386 Ribosomal L25p family LLI13_RS14255 PF14693 Ribosomal protein TL5, C-terminal domain LLI13_RS14260 PF01195 Peptidyl-tRNA hydrolase LLI13_RS14270 PF00311 Phosphoenolpyruvate carboxylase LLI13_RS14280 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS14285 PF13649 Methyltransferase domain LLI13_RS14290 PF01047 MarR family LLI13_RS14295 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS14295 PF00072 Response regulator receiver domain LLI13_RS14305 PF10509 Galactokinase galactose-binding signature LLI13_RS14305 PF08544 GHMP kinases C terminal LLI13_RS14305 PF00288 GHMP kinases N terminal domain LLI13_RS14310 PF16363 GDP-mannose 4,6 dehydratase LLI13_RS14315 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LLI13_RS14315 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LLI13_RS14320 PF00474 Sodium:solute symporter family LLI13_RS14330 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS14330 PF00072 Response regulator receiver domain LLI13_RS14345 PF00005 ABC transporter LLI13_RS14345 PF16326 ABC transporter C-terminal domain LLI13_RS14345 PF12848 ABC transporter LLI13_RS14350 PF00288 GHMP kinases N terminal domain LLI13_RS14350 PF08544 GHMP kinases C terminal LLI13_RS14355 PF00398 Ribosomal RNA adenine dimethylase LLI13_RS14360 PF01026 TatD related DNase LLI13_RS14370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS14375 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LLI13_RS14375 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase LLI13_RS14400 PF13190 PDGLE domain LLI13_RS14400 PF01891 Cobalt uptake substrate-specific transmembrane region LLI13_RS14410 PF00005 ABC transporter LLI13_RS14415 PF01047 MarR family LLI13_RS14420 PF00144 Beta-lactamase LLI13_RS14445 PF03176 MMPL family LLI13_RS14450 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS14450 PF16859 Tetracyclin repressor-like, C-terminal domain LLI13_RS14455 PF07676 WD40-like Beta Propeller Repeat LLI13_RS14455 PF03572 Peptidase family S41 LLI13_RS14455 PF14684 Tricorn protease C1 domain LLI13_RS14455 PF14685 Tricorn protease PDZ domain LLI13_RS14470 PF00561 alpha/beta hydrolase fold LLI13_RS14475 PF00743 Flavin-binding monooxygenase-like LLI13_RS14485 PF00293 NUDIX domain LLI13_RS14490 PF03372 Endonuclease/Exonuclease/phosphatase family LLI13_RS14530 PF01967 MoaC family LLI13_RS14530 PF00994 Probable molybdopterin binding domain LLI13_RS14535 PF01967 MoaC family LLI13_RS14540 PF00994 Probable molybdopterin binding domain LLI13_RS14540 PF03454 MoeA C-terminal region (domain IV) LLI13_RS14540 PF03453 MoeA N-terminal region (domain I and II) LLI13_RS14545 PF00483 Nucleotidyl transferase LLI13_RS14550 PF01812 5-formyltetrahydrofolate cyclo-ligase family LLI13_RS14560 PF03471 Transporter associated domain LLI13_RS14560 PF02080 TrkA-C domain LLI13_RS14560 PF00999 Sodium/hydrogen exchanger family LLI13_RS14575 PF01048 Phosphorylase superfamily LLI13_RS14585 PF01741 Large-conductance mechanosensitive channel, MscL LLI13_RS14595 PF03576 Peptidase family S58 LLI13_RS14610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LLI13_RS14610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LLI13_RS14615 PF00294 pfkB family carbohydrate kinase LLI13_RS14620 PF00455 DeoR C terminal sensor domain LLI13_RS14620 PF08220 DeoR-like helix-turn-helix domain LLI13_RS14625 PF07690 Major Facilitator Superfamily LLI13_RS14635 PF17754 MftR C-terminal domain LLI13_RS14635 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS14640 PF00140 Sigma-70 factor, region 1.2 LLI13_RS14640 PF04542 Sigma-70 region 2 LLI13_RS14640 PF04539 Sigma-70 region 3 LLI13_RS14640 PF04545 Sigma-70, region 4 LLI13_RS14650 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LLI13_RS14655 PF01047 MarR family LLI13_RS14660 PF07690 Major Facilitator Superfamily LLI13_RS14680 PF14659 Phage integrase, N-terminal SAM-like domain LLI13_RS14680 PF00589 Phage integrase family LLI13_RS14685 PF12728 Helix-turn-helix domain LLI13_RS14715 PF01580 FtsK/SpoIIIE family LLI13_RS14745 PF00665 Integrase core domain LLI13_RS14765 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LLI13_RS14765 PF18766 SWI2/SNF2 ATPase LLI13_RS14765 PF11867 Domain of unknown function (DUF3387) LLI13_RS14775 PF02384 N-6 DNA Methylase LLI13_RS14775 PF12161 HsdM N-terminal domain LLI13_RS14780 PF02384 N-6 DNA Methylase LLI13_RS14785 PF02661 Fic/DOC family LLI13_RS14825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LLI13_RS14825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LLI13_RS14840 PF00107 Zinc-binding dehydrogenase LLI13_RS14840 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS14845 PF00282 Pyridoxal-dependent decarboxylase conserved domain LLI13_RS14855 PF00580 UvrD/REP helicase N-terminal domain LLI13_RS14855 PF13361 UvrD-like helicase C-terminal domain LLI13_RS14925 PF00255 Glutathione peroxidase LLI13_RS14950 PF00768 D-alanyl-D-alanine carboxypeptidase LLI13_RS14950 PF07943 Penicillin-binding protein 5, C-terminal domain LLI13_RS14970 PF01551 Peptidase family M23 LLI13_RS14975 PF00069 Protein kinase domain LLI13_RS14975 PF03793 PASTA domain LLI13_RS14985 PF01476 LysM domain LLI13_RS14985 PF00756 Putative esterase LLI13_RS14995 PF04055 Radical SAM superfamily LLI13_RS15000 PF00296 Luciferase-like monooxygenase LLI13_RS15015 PF03704 Bacterial transcriptional activator domain LLI13_RS15015 PF00931 NB-ARC domain LLI13_RS15015 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS15030 PF13360 PQQ-like domain LLI13_RS15030 PF00069 Protein kinase domain LLI13_RS15035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLI13_RS15035 PF18029 Glyoxalase-like domain LLI13_RS15040 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS15050 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LLI13_RS15050 PF01243 Pyridoxamine 5'-phosphate oxidase LLI13_RS15065 PF07690 Major Facilitator Superfamily LLI13_RS15070 PF01965 DJ-1/PfpI family LLI13_RS15085 PF01740 STAS domain LLI13_RS15100 PF00551 Formyl transferase LLI13_RS15130 PF13732 Domain of unknown function (DUF4162) LLI13_RS15130 PF00005 ABC transporter LLI13_RS15140 PF12697 Alpha/beta hydrolase family LLI13_RS15145 PF18357 Diphteria toxin repressor SH3 domain LLI13_RS15145 PF02742 Iron dependent repressor, metal binding and dimerisation domain LLI13_RS15145 PF01325 Iron dependent repressor, N-terminal DNA binding domain LLI13_RS15150 PF13580 SIS domain LLI13_RS15165 PF00860 Permease family LLI13_RS15170 PF00285 Citrate synthase, C-terminal domain LLI13_RS15175 PF01243 Pyridoxamine 5'-phosphate oxidase LLI13_RS15175 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LLI13_RS15185 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS15190 PF00501 AMP-binding enzyme LLI13_RS15190 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS15195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS15195 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS15195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS15200 PF00289 Biotin carboxylase, N-terminal domain LLI13_RS15200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLI13_RS15200 PF00364 Biotin-requiring enzyme LLI13_RS15200 PF02785 Biotin carboxylase C-terminal domain LLI13_RS15205 PF01039 Carboxyl transferase domain LLI13_RS15215 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain LLI13_RS15215 PF08608 Wyosine base formation LLI13_RS15230 PF00892 EamA-like transporter family LLI13_RS15235 PF00293 NUDIX domain LLI13_RS15235 PF13344 Haloacid dehalogenase-like hydrolase LLI13_RS15240 PF13183 4Fe-4S dicluster domain LLI13_RS15240 PF02913 FAD linked oxidases, C-terminal domain LLI13_RS15240 PF01565 FAD binding domain LLI13_RS15265 PF00067 Cytochrome P450 LLI13_RS15270 PF00067 Cytochrome P450 LLI13_RS15275 PF00266 Aminotransferase class-V LLI13_RS15285 PF13732 Domain of unknown function (DUF4162) LLI13_RS15285 PF00005 ABC transporter LLI13_RS15310 PF00248 Aldo/keto reductase family LLI13_RS15330 PF01047 MarR family LLI13_RS15340 PF00860 Permease family LLI13_RS15360 PF13462 Thioredoxin LLI13_RS15360 PF06965 Na+/H+ antiporter 1 LLI13_RS15380 PF01551 Peptidase family M23 LLI13_RS15380 PF08525 Opacity-associated protein A N-terminal motif LLI13_RS15380 PF01476 LysM domain LLI13_RS15410 PF11228 Protein of unknown function (DUF3027) LLI13_RS15415 PF07690 Major Facilitator Superfamily LLI13_RS15425 PF01048 Phosphorylase superfamily LLI13_RS15430 PF02621 Menaquinone biosynthesis LLI13_RS15460 PF00271 Helicase conserved C-terminal domain LLI13_RS15460 PF04851 Type III restriction enzyme, res subunit LLI13_RS15470 PF13538 UvrD-like helicase C-terminal domain LLI13_RS15475 PF03932 CutC family LLI13_RS15485 PF00082 Subtilase family LLI13_RS15485 PF04151 Bacterial pre-peptidase C-terminal domain LLI13_RS15510 PF01418 Helix-turn-helix domain, rpiR family LLI13_RS15510 PF01380 SIS domain LLI13_RS15515 PF01380 SIS domain LLI13_RS15530 PF07690 Major Facilitator Superfamily LLI13_RS15535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LLI13_RS15535 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS15540 PF00118 TCP-1/cpn60 chaperonin family LLI13_RS15545 PF00313 'Cold-shock' DNA-binding domain LLI13_RS15550 PF02597 ThiS family LLI13_RS15555 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS15560 PF00535 Glycosyl transferase family 2 LLI13_RS15565 PF00982 Glycosyltransferase family 20 LLI13_RS15565 PF05116 Sucrose-6F-phosphate phosphohydrolase LLI13_RS15580 PF01547 Bacterial extracellular solute-binding protein LLI13_RS15585 PF00480 ROK family LLI13_RS15590 PF01979 Amidohydrolase family LLI13_RS15595 PF00294 pfkB family carbohydrate kinase LLI13_RS15605 PF03707 Bacterial signalling protein N terminal repeat LLI13_RS15605 PF13188 PAS domain LLI13_RS15605 PF00990 Diguanylate cyclase, GGDEF domain LLI13_RS15605 PF00563 EAL domain LLI13_RS15610 PF01613 Flavin reductase like domain LLI13_RS15620 PF03462 PCRF domain LLI13_RS15620 PF00472 RF-1 domain LLI13_RS15625 PF02342 TerD domain LLI13_RS15650 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS15650 PF00107 Zinc-binding dehydrogenase LLI13_RS15655 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LLI13_RS15670 PF08279 HTH domain LLI13_RS15670 PF13280 WYL domain LLI13_RS15675 PF00005 ABC transporter LLI13_RS15675 PF17912 MalK OB fold domain LLI13_RS15685 PF00483 Nucleotidyl transferase LLI13_RS15695 PF08032 RNA 2'-O ribose methyltransferase substrate binding LLI13_RS15695 PF00588 SpoU rRNA Methylase family LLI13_RS15700 PF09190 DALR domain LLI13_RS15700 PF01406 tRNA synthetases class I (C) catalytic domain LLI13_RS15705 PF02542 YgbB family LLI13_RS15710 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LLI13_RS15715 PF02559 CarD-like/TRCF domain LLI13_RS15725 PF00072 Response regulator receiver domain LLI13_RS15725 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS15730 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS15735 PF01895 PhoU domain LLI13_RS15745 PF07690 Major Facilitator Superfamily LLI13_RS15750 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS15755 PF03575 Peptidase family S51 LLI13_RS15765 PF13744 Helix-turn-helix domain LLI13_RS15770 PF05973 Phage derived protein Gp49-like (DUF891) LLI13_RS15840 PF10722 Putative bacterial sensory transduction regulator LLI13_RS15845 PF13439 Glycosyltransferase Family 4 LLI13_RS15845 PF00534 Glycosyl transferases group 1 LLI13_RS15855 PF00877 NlpC/P60 family LLI13_RS15865 PF10724 Protein of unknown function (DUF2516) LLI13_RS15880 PF01381 Helix-turn-helix LLI13_RS15890 PF04978 Protein of unknown function (DUF664) LLI13_RS15895 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS15900 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS15905 PF01547 Bacterial extracellular solute-binding protein LLI13_RS15910 PF00155 Aminotransferase class I and II LLI13_RS15915 PF07729 FCD domain LLI13_RS15915 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS15920 PF13538 UvrD-like helicase C-terminal domain LLI13_RS15925 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS15930 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS15930 PF07729 FCD domain LLI13_RS15940 PF13419 Haloacid dehalogenase-like hydrolase LLI13_RS15945 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS15945 PF07702 UTRA domain LLI13_RS15965 PF17668 Acetyltransferase (GNAT) domain LLI13_RS15965 PF13530 Sterol carrier protein domain LLI13_RS15975 PF02580 D-Tyr-tRNA(Tyr) deacylase LLI13_RS15985 PF01475 Ferric uptake regulator family LLI13_RS15990 PF08768 Domain of unknown function (DUF1794) LLI13_RS16020 PF07210 Protein of unknown function (DUF1416) LLI13_RS16025 PF00581 Rhodanese-like domain LLI13_RS16050 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS16055 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS16060 PF13180 PDZ domain LLI13_RS16065 PF00072 Response regulator receiver domain LLI13_RS16065 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS16070 PF00672 HAMP domain LLI13_RS16070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS16070 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS16075 PF00544 Pectate lyase LLI13_RS16110 PF02872 5'-nucleotidase, C-terminal domain LLI13_RS16110 PF00149 Calcineurin-like phosphoesterase LLI13_RS16110 PF17936 Bacterial Ig domain LLI13_RS16115 PF00583 Acetyltransferase (GNAT) family LLI13_RS16130 PF00005 ABC transporter LLI13_RS16150 PF13089 Polyphosphate kinase N-terminal domain LLI13_RS16150 PF17941 Polyphosphate kinase C-terminal domain 1 LLI13_RS16150 PF13090 Polyphosphate kinase C-terminal domain 2 LLI13_RS16150 PF02503 Polyphosphate kinase middle domain LLI13_RS16160 PF00293 NUDIX domain LLI13_RS16160 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS16165 PF12849 PBP superfamily domain LLI13_RS16170 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS16175 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS16180 PF00005 ABC transporter LLI13_RS16185 PF01384 Phosphate transporter family LLI13_RS16195 PF02583 Metal-sensitive transcriptional repressor LLI13_RS16215 PF01569 PAP2 superfamily LLI13_RS16220 PF00877 NlpC/P60 family LLI13_RS16220 PF01476 LysM domain LLI13_RS16220 PF08239 Bacterial SH3 domain LLI13_RS16225 PF00069 Protein kinase domain LLI13_RS16225 PF00400 WD domain, G-beta repeat LLI13_RS16265 PF00005 ABC transporter LLI13_RS16275 PF07730 Histidine kinase LLI13_RS16280 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS16280 PF00072 Response regulator receiver domain LLI13_RS16300 PF01047 MarR family LLI13_RS16310 PF08448 PAS fold LLI13_RS16310 PF13581 Histidine kinase-like ATPase domain LLI13_RS16310 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS16310 PF13466 STAS domain LLI13_RS16315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS16335 PF01266 FAD dependent oxidoreductase LLI13_RS16340 PF02390 Putative methyltransferase LLI13_RS16360 PF01872 RibD C-terminal domain LLI13_RS16360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LLI13_RS16365 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS16365 PF00072 Response regulator receiver domain LLI13_RS16370 PF05231 MASE1 LLI13_RS16370 PF07730 Histidine kinase LLI13_RS16370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS16385 PF00270 DEAD/DEAH box helicase LLI13_RS16385 PF00271 Helicase conserved C-terminal domain LLI13_RS16420 PF11898 Domain of unknown function (DUF3418) LLI13_RS16420 PF00270 DEAD/DEAH box helicase LLI13_RS16420 PF04408 Helicase associated domain (HA2) LLI13_RS16420 PF00271 Helicase conserved C-terminal domain LLI13_RS16420 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LLI13_RS16440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LLI13_RS16440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LLI13_RS16450 PF00586 AIR synthase related protein, N-terminal domain LLI13_RS16450 PF02769 AIR synthase related protein, C-terminal domain LLI13_RS16455 PF00156 Phosphoribosyl transferase domain LLI13_RS16470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LLI13_RS16470 PF00586 AIR synthase related protein, N-terminal domain LLI13_RS16470 PF02769 AIR synthase related protein, C-terminal domain LLI13_RS16480 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LLI13_RS16485 PF11774 Lsr2 LLI13_RS16500 PF13732 Domain of unknown function (DUF4162) LLI13_RS16500 PF00005 ABC transporter LLI13_RS16515 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS16525 PF01259 SAICAR synthetase LLI13_RS16540 PF02844 Phosphoribosylglycinamide synthetase, N domain LLI13_RS16540 PF02843 Phosphoribosylglycinamide synthetase, C domain LLI13_RS16540 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LLI13_RS16545 PF12169 DNA polymerase III subunits gamma and tau domain III LLI13_RS16670 PF17101 Stealth protein CR1, conserved region 1 LLI13_RS16670 PF11380 Stealth protein CR2, conserved region 2 LLI13_RS16670 PF17102 Stealth protein CR3, conserved region 3 LLI13_RS16670 PF17103 Stealth protein CR4, conserved region 4 LLI13_RS16675 PF17102 Stealth protein CR3, conserved region 3 LLI13_RS16675 PF11380 Stealth protein CR2, conserved region 2 LLI13_RS16675 PF17101 Stealth protein CR1, conserved region 1 LLI13_RS16675 PF17103 Stealth protein CR4, conserved region 4 LLI13_RS16700 PF01804 Penicillin amidase LLI13_RS16735 PF14437 MafB19-like deaminase LLI13_RS16750 PF14659 Phage integrase, N-terminal SAM-like domain LLI13_RS16750 PF00589 Phage integrase family LLI13_RS16755 PF12728 Helix-turn-helix domain LLI13_RS16825 PF07876 Stress responsive A/B Barrel Domain LLI13_RS16830 PF04542 Sigma-70 region 2 LLI13_RS16830 PF04539 Sigma-70 region 3 LLI13_RS16830 PF04545 Sigma-70, region 4 LLI13_RS16835 PF04539 Sigma-70 region 3 LLI13_RS16835 PF04545 Sigma-70, region 4 LLI13_RS16835 PF04542 Sigma-70 region 2 LLI13_RS16845 PF01047 MarR family LLI13_RS16850 PF07690 Major Facilitator Superfamily LLI13_RS16870 PF01243 Pyridoxamine 5'-phosphate oxidase LLI13_RS16875 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LLI13_RS16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS16885 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS16885 PF00672 HAMP domain LLI13_RS16890 PF00072 Response regulator receiver domain LLI13_RS16890 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS16910 PF07885 Ion channel LLI13_RS16910 PF02254 TrkA-N domain LLI13_RS16940 PF00072 Response regulator receiver domain LLI13_RS16945 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS16945 PF00501 AMP-binding enzyme LLI13_RS16950 PF04542 Sigma-70 region 2 LLI13_RS16950 PF08281 Sigma-70, region 4 LLI13_RS16990 PF13180 PDZ domain LLI13_RS16995 PF03009 Glycerophosphoryl diester phosphodiesterase family LLI13_RS17005 PF07516 SecA Wing and Scaffold domain LLI13_RS17005 PF01043 SecA preprotein cross-linking domain LLI13_RS17005 PF07517 SecA DEAD-like domain LLI13_RS17005 PF02810 SEC-C motif LLI13_RS17020 PF05195 Aminopeptidase P, N-terminal domain LLI13_RS17020 PF00557 Metallopeptidase family M24 LLI13_RS17040 PF02630 SCO1/SenC LLI13_RS17050 PF05425 Copper resistance protein D LLI13_RS17055 PF04261 Dyp-type peroxidase family LLI13_RS17060 PF01842 ACT domain LLI13_RS17060 PF00800 Prephenate dehydratase LLI13_RS17065 PF02403 Seryl-tRNA synthetase N-terminal domain LLI13_RS17065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LLI13_RS17080 PF00005 ABC transporter LLI13_RS17090 PF00005 ABC transporter LLI13_RS17095 PF00106 short chain dehydrogenase LLI13_RS17095 PF00561 alpha/beta hydrolase fold LLI13_RS17100 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family LLI13_RS17110 PF00296 Luciferase-like monooxygenase LLI13_RS17120 PF01551 Peptidase family M23 LLI13_RS17125 PF00664 ABC transporter transmembrane region LLI13_RS17125 PF00005 ABC transporter LLI13_RS17130 PF02322 Cytochrome bd terminal oxidase subunit II LLI13_RS17135 PF01654 Cytochrome bd terminal oxidase subunit I LLI13_RS17140 PF00155 Aminotransferase class I and II LLI13_RS17145 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS17145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LLI13_RS17150 PF00149 Calcineurin-like phosphoesterase LLI13_RS17160 PF02342 TerD domain LLI13_RS17165 PF01964 Radical SAM ThiC family LLI13_RS17165 PF13667 ThiC-associated domain LLI13_RS17185 PF17260 Family of unknown function (DUF5326) LLI13_RS17190 PF07883 Cupin domain LLI13_RS17195 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LLI13_RS17200 PF01451 Low molecular weight phosphotyrosine protein phosphatase LLI13_RS17205 PF01053 Cys/Met metabolism PLP-dependent enzyme LLI13_RS17210 PF03466 LysR substrate binding domain LLI13_RS17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS17230 PF07690 Major Facilitator Superfamily LLI13_RS17245 PF00144 Beta-lactamase LLI13_RS17255 PF03796 DnaB-like helicase C terminal domain LLI13_RS17255 PF00772 DnaB-like helicase N terminal domain LLI13_RS17265 PF03948 Ribosomal protein L9, C-terminal domain LLI13_RS17265 PF01281 Ribosomal protein L9, N-terminal domain LLI13_RS17270 PF01084 Ribosomal protein S18 LLI13_RS17275 PF00436 Single-strand binding protein family LLI13_RS17280 PF01250 Ribosomal protein S6 LLI13_RS17305 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS17305 PF00912 Transglycosylase LLI13_RS17315 PF01658 Myo-inositol-1-phosphate synthase LLI13_RS17320 PF07690 Major Facilitator Superfamily LLI13_RS17330 PF12627 Probable RNA and SrmB- binding site of polymerase A LLI13_RS17330 PF13735 tRNA nucleotidyltransferase domain 2 putative LLI13_RS17330 PF01743 Poly A polymerase head domain LLI13_RS17345 PF03793 PASTA domain LLI13_RS17345 PF00069 Protein kinase domain LLI13_RS17350 PF04542 Sigma-70 region 2 LLI13_RS17350 PF08281 Sigma-70, region 4 LLI13_RS17360 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS17365 PF00085 Thioredoxin LLI13_RS17375 PF17762 HTH domain found in ParB protein LLI13_RS17375 PF02195 ParB-like nuclease domain LLI13_RS17380 PF13614 AAA domain LLI13_RS17385 PF02527 rRNA small subunit methyltransferase G LLI13_RS17395 PF02096 60Kd inner membrane protein LLI13_RS17400 PF01809 Putative membrane protein insertion efficiency factor LLI13_RS17405 PF00825 Ribonuclease P LLI13_RS17410 PF00468 Ribosomal protein L34 LLI13_RS17415 PF00308 Bacterial dnaA protein LLI13_RS17415 PF08299 Bacterial dnaA protein helix-turn-helix LLI13_RS17420 PF00712 DNA polymerase III beta subunit, N-terminal domain LLI13_RS17420 PF02767 DNA polymerase III beta subunit, central domain LLI13_RS17420 PF02768 DNA polymerase III beta subunit, C-terminal domain LLI13_RS17425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LLI13_RS17425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LLI13_RS17430 PF02463 RecF/RecN/SMC N terminal domain LLI13_RS17435 PF05258 Dna[CI] antecedent, DciA LLI13_RS17440 PF00204 DNA gyrase B LLI13_RS17440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS17440 PF01751 Toprim domain LLI13_RS17440 PF00986 DNA gyrase B subunit, carboxyl terminus LLI13_RS17445 PF03989 DNA gyrase C-terminal domain, beta-propeller LLI13_RS17445 PF00521 DNA gyrase/topoisomerase IV, subunit A LLI13_RS17450 PF12089 Transmembrane domain of unknown function (DUF3566) LLI13_RS17480 PF00069 Protein kinase domain LLI13_RS17495 PF17258 Family of unknown function (DUF5324) LLI13_RS17500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LLI13_RS17505 PF01694 Rhomboid family LLI13_RS17510 PF06781 Cell division protein CrgA LLI13_RS17525 PF00117 Glutamine amidotransferase class-I LLI13_RS17530 PF04203 Sortase domain LLI13_RS17535 PF04203 Sortase domain LLI13_RS17540 PF00069 Protein kinase domain LLI13_RS17540 PF03793 PASTA domain LLI13_RS17545 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS17550 PF01098 Cell cycle protein LLI13_RS17560 PF16697 Inner membrane component of T3SS, cytoplasmic domain LLI13_RS17565 PF12401 Protein of unknown function (DUF2662) LLI13_RS17565 PF00498 FHA domain LLI13_RS17575 PF00753 Metallo-beta-lactamase superfamily LLI13_RS17575 PF00581 Rhodanese-like domain LLI13_RS17585 PF01925 Sulfite exporter TauE/SafE LLI13_RS17590 PF00085 Thioredoxin LLI13_RS17595 PF02583 Metal-sensitive transcriptional repressor LLI13_RS17605 PF02583 Metal-sensitive transcriptional repressor LLI13_RS17620 PF00005 ABC transporter LLI13_RS17620 PF12704 MacB-like periplasmic core domain LLI13_RS17620 PF02687 FtsX-like permease family LLI13_RS17630 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS17630 PF00072 Response regulator receiver domain LLI13_RS17635 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS17640 PF03756 A-factor biosynthesis hotdog domain LLI13_RS17645 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS17665 PF00175 Oxidoreductase NAD-binding domain LLI13_RS17665 PF00970 Oxidoreductase FAD-binding domain LLI13_RS17665 PF00111 2Fe-2S iron-sulfur cluster binding domain LLI13_RS17670 PF01883 Iron-sulfur cluster assembly protein LLI13_RS17675 PF05138 Phenylacetic acid catabolic protein LLI13_RS17680 PF06243 Phenylacetic acid degradation B LLI13_RS17685 PF05138 Phenylacetic acid catabolic protein LLI13_RS17700 PF00588 SpoU rRNA Methylase family LLI13_RS17710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS17710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS17710 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LLI13_RS17715 PF18665 Tetracyclin repressor-like, C-terminal domain LLI13_RS17715 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS17720 PF01037 Lrp/AsnC ligand binding domain LLI13_RS17720 PF13404 AsnC-type helix-turn-helix domain LLI13_RS17725 PF00676 Dehydrogenase E1 component LLI13_RS17730 PF02780 Transketolase, C-terminal domain LLI13_RS17730 PF02779 Transketolase, pyrimidine binding domain LLI13_RS17735 PF00364 Biotin-requiring enzyme LLI13_RS17735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LLI13_RS17735 PF02817 e3 binding domain LLI13_RS17740 PF12804 MobA-like NTP transferase domain LLI13_RS17745 PF03453 MoeA N-terminal region (domain I and II) LLI13_RS17745 PF03454 MoeA C-terminal region (domain IV) LLI13_RS17745 PF00994 Probable molybdopterin binding domain LLI13_RS17755 PF01061 ABC-2 type transporter LLI13_RS17760 PF13732 Domain of unknown function (DUF4162) LLI13_RS17760 PF00005 ABC transporter LLI13_RS17765 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS17765 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS17765 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS17765 PF08659 KR domain LLI13_RS17765 PF00550 Phosphopantetheine attachment site LLI13_RS17765 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS17765 PF00698 Acyl transferase domain LLI13_RS17765 PF14765 Polyketide synthase dehydratase LLI13_RS17775 PF10759 Protein of unknown function (DUF2587) LLI13_RS17780 PF00069 Protein kinase domain LLI13_RS17780 PF03793 PASTA domain LLI13_RS17785 PF03793 PASTA domain LLI13_RS17785 PF00069 Protein kinase domain LLI13_RS17790 PF00676 Dehydrogenase E1 component LLI13_RS17795 PF02780 Transketolase, C-terminal domain LLI13_RS17795 PF02779 Transketolase, pyrimidine binding domain LLI13_RS17800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LLI13_RS17800 PF02817 e3 binding domain LLI13_RS17800 PF00364 Biotin-requiring enzyme LLI13_RS17810 PF00768 D-alanyl-D-alanine carboxypeptidase LLI13_RS17815 PF07729 FCD domain LLI13_RS17815 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS17830 PF00795 Carbon-nitrogen hydrolase LLI13_RS17845 PF02127 Aminopeptidase I zinc metalloprotease (M18) LLI13_RS17850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS17850 PF12806 Acetyl-CoA dehydrogenase C-terminal like LLI13_RS17850 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS17850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS17860 PF02678 Pirin LLI13_RS17860 PF05726 Pirin C-terminal cupin domain LLI13_RS17870 PF02938 GAD domain LLI13_RS17870 PF00152 tRNA synthetases class II (D, K and N) LLI13_RS17870 PF01336 OB-fold nucleic acid binding domain LLI13_RS17885 PF08000 Bacterial PH domain LLI13_RS17890 PF09334 tRNA synthetases class I (M) LLI13_RS17890 PF08264 Anticodon-binding domain of tRNA LLI13_RS17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS17905 PF03466 LysR substrate binding domain LLI13_RS17910 PF02031 Streptomyces extracellular neutral proteinase (M7) family LLI13_RS17960 PF00128 Alpha amylase, catalytic domain LLI13_RS17980 PF00067 Cytochrome P450 LLI13_RS17995 PF00313 'Cold-shock' DNA-binding domain LLI13_RS18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS18005 PF03466 LysR substrate binding domain LLI13_RS18010 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS18025 PF13407 Periplasmic binding protein domain LLI13_RS18035 PF01757 Acyltransferase family LLI13_RS18040 PF12680 SnoaL-like domain LLI13_RS18040 PF08281 Sigma-70, region 4 LLI13_RS18040 PF04542 Sigma-70 region 2 LLI13_RS18045 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS18055 PF01522 Polysaccharide deacetylase LLI13_RS18060 PF18389 TrmO C-terminal domain LLI13_RS18060 PF01980 tRNA-methyltransferase O LLI13_RS18070 PF01964 Radical SAM ThiC family LLI13_RS18080 PF01566 Natural resistance-associated macrophage protein LLI13_RS18080 PF03358 NADPH-dependent FMN reductase LLI13_RS18090 PF05532 CsbD-like LLI13_RS18095 PF02342 TerD domain LLI13_RS18100 PF02342 TerD domain LLI13_RS18105 PF04226 Transglycosylase associated protein LLI13_RS18110 PF13411 MerR HTH family regulatory protein LLI13_RS18110 PF07739 TipAS antibiotic-recognition domain LLI13_RS18115 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LLI13_RS18115 PF03033 Glycosyltransferase family 28 N-terminal domain LLI13_RS18125 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS18125 PF00931 NB-ARC domain LLI13_RS18125 PF03704 Bacterial transcriptional activator domain LLI13_RS18140 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS18145 PF16363 GDP-mannose 4,6 dehydratase LLI13_RS18155 PF00535 Glycosyl transferase family 2 LLI13_RS18180 PF00999 Sodium/hydrogen exchanger family LLI13_RS18185 PF16363 GDP-mannose 4,6 dehydratase LLI13_RS18215 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS18215 PF00072 Response regulator receiver domain LLI13_RS18220 PF07730 Histidine kinase LLI13_RS18240 PF02585 GlcNAc-PI de-N-acetylase LLI13_RS18245 PF01402 Ribbon-helix-helix protein, copG family LLI13_RS18250 PF01850 PIN domain LLI13_RS18270 PF09957 Bacterial antitoxin of type II TA system, VapB LLI13_RS18310 PF00487 Fatty acid desaturase LLI13_RS18320 PF13581 Histidine kinase-like ATPase domain LLI13_RS18320 PF13466 STAS domain LLI13_RS18320 PF08448 PAS fold LLI13_RS18320 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS18385 PF12728 Helix-turn-helix domain LLI13_RS18390 PF00589 Phage integrase family LLI13_RS18390 PF14659 Phage integrase, N-terminal SAM-like domain LLI13_RS18415 PF00692 dUTPase LLI13_RS18420 PF00156 Phosphoribosyl transferase domain LLI13_RS18440 PF13183 4Fe-4S dicluster domain LLI13_RS18440 PF02754 Cysteine-rich domain LLI13_RS18445 PF00953 Glycosyl transferase family 4 LLI13_RS18450 PF00012 Hsp70 protein LLI13_RS18455 PF01025 GrpE LLI13_RS18460 PF00226 DnaJ domain LLI13_RS18460 PF01556 DnaJ C terminal domain LLI13_RS18460 PF00684 DnaJ central domain LLI13_RS18465 PF13411 MerR HTH family regulatory protein LLI13_RS18470 PF13407 Periplasmic binding protein domain LLI13_RS18500 PF02861 Clp amino terminal domain, pathogenicity island component LLI13_RS18500 PF17871 AAA lid domain LLI13_RS18500 PF10431 C-terminal, D2-small domain, of ClpB protein LLI13_RS18500 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS18500 PF07724 AAA domain (Cdc48 subfamily) LLI13_RS18525 PF00155 Aminotransferase class I and II LLI13_RS18545 PF01263 Aldose 1-epimerase LLI13_RS18550 PF00156 Phosphoribosyl transferase domain LLI13_RS18555 PF01116 Fructose-bisphosphate aldolase class-II LLI13_RS18560 PF07690 Major Facilitator Superfamily LLI13_RS18570 PF03301 Tryptophan 2,3-dioxygenase LLI13_RS18575 PF00266 Aminotransferase class-V LLI13_RS18595 PF07730 Histidine kinase LLI13_RS18600 PF00072 Response regulator receiver domain LLI13_RS18600 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS18605 PF07730 Histidine kinase LLI13_RS18610 PF00072 Response regulator receiver domain LLI13_RS18610 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS18615 PF00067 Cytochrome P450 LLI13_RS18625 PF00005 ABC transporter LLI13_RS18625 PF13732 Domain of unknown function (DUF4162) LLI13_RS18645 PF00709 Adenylosuccinate synthetase LLI13_RS18660 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS18660 PF07729 FCD domain LLI13_RS18665 PF00202 Aminotransferase class-III LLI13_RS18670 PF01965 DJ-1/PfpI family LLI13_RS18680 PF13360 PQQ-like domain LLI13_RS18680 PF00069 Protein kinase domain LLI13_RS18680 PF01011 PQQ enzyme repeat LLI13_RS18680 PF13570 PQQ-like domain LLI13_RS18685 PF12849 PBP superfamily domain LLI13_RS18695 PF02575 YbaB/EbfC DNA-binding family LLI13_RS18700 PF00633 Helix-hairpin-helix motif LLI13_RS18700 PF02132 RecR protein LLI13_RS18700 PF13662 Toprim domain LLI13_RS18710 PF05973 Phage derived protein Gp49-like (DUF891) LLI13_RS18715 PF13744 Helix-turn-helix domain LLI13_RS18720 PF01551 Peptidase family M23 LLI13_RS18725 PF13840 ACT domain LLI13_RS18725 PF00696 Amino acid kinase family LLI13_RS18725 PF01842 ACT domain LLI13_RS18730 PF01118 Semialdehyde dehydrogenase, NAD binding domain LLI13_RS18730 PF02774 Semialdehyde dehydrogenase, dimerisation domain LLI13_RS18735 PF08281 Sigma-70, region 4 LLI13_RS18735 PF04542 Sigma-70 region 2 LLI13_RS18750 PF00326 Prolyl oligopeptidase family LLI13_RS18760 PF03773 Predicted permease LLI13_RS18785 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS18785 PF00107 Zinc-binding dehydrogenase LLI13_RS18785 PF08659 KR domain LLI13_RS18785 PF00698 Acyl transferase domain LLI13_RS18785 PF00550 Phosphopantetheine attachment site LLI13_RS18785 PF14765 Polyketide synthase dehydratase LLI13_RS18785 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS18785 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS18785 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS18800 PF03704 Bacterial transcriptional activator domain LLI13_RS18800 PF00931 NB-ARC domain LLI13_RS18800 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS18840 PF04235 Protein of unknown function (DUF418) LLI13_RS18840 PF07786 Protein of unknown function (DUF1624) LLI13_RS18895 PF04545 Sigma-70, region 4 LLI13_RS18895 PF04542 Sigma-70 region 2 LLI13_RS18925 PF01425 Amidase LLI13_RS18955 PF00665 Integrase core domain LLI13_RS18980 PF00149 Calcineurin-like phosphoesterase LLI13_RS18980 PF10518 TAT (twin-arginine translocation) pathway signal sequence LLI13_RS19020 PF00912 Transglycosylase LLI13_RS19020 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS19025 PF02467 Transcription factor WhiB LLI13_RS19030 PF17886 HSP20-like domain found in ArsA LLI13_RS19030 PF02374 Anion-transporting ATPase LLI13_RS19035 PF02374 Anion-transporting ATPase LLI13_RS19055 PF00753 Metallo-beta-lactamase superfamily LLI13_RS19055 PF16123 Hydroxyacylglutathione hydrolase C-terminus LLI13_RS19060 PF00027 Cyclic nucleotide-binding domain LLI13_RS19060 PF13545 Crp-like helix-turn-helix domain LLI13_RS19065 PF10576 Iron-sulfur binding domain of endonuclease III LLI13_RS19065 PF00730 HhH-GPD superfamily base excision DNA repair protein LLI13_RS19065 PF00633 Helix-hairpin-helix motif LLI13_RS19070 PF00293 NUDIX domain LLI13_RS19075 PF02674 Colicin V production protein LLI13_RS19085 PF00561 alpha/beta hydrolase fold LLI13_RS19095 PF06965 Na+/H+ antiporter 1 LLI13_RS19100 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS19100 PF00501 AMP-binding enzyme LLI13_RS19100 PF16177 Acetyl-coenzyme A synthetase N-terminus LLI13_RS19105 PF00484 Carbonic anhydrase LLI13_RS19135 PF00437 Type II/IV secretion system protein LLI13_RS19165 PF00271 Helicase conserved C-terminal domain LLI13_RS19165 PF09369 Domain of unknown function (DUF1998) LLI13_RS19165 PF00270 DEAD/DEAH box helicase LLI13_RS19170 PF01740 STAS domain LLI13_RS19175 PF13581 Histidine kinase-like ATPase domain LLI13_RS19180 PF03030 Inorganic H+ pyrophosphatase LLI13_RS19200 PF01751 Toprim domain LLI13_RS19200 PF13368 Topoisomerase C-terminal repeat LLI13_RS19200 PF01131 DNA topoisomerase LLI13_RS19205 PF02223 Thymidylate kinase LLI13_RS19215 PF00561 alpha/beta hydrolase fold LLI13_RS19240 PF00476 DNA polymerase family A LLI13_RS19240 PF01612 3'-5' exonuclease LLI13_RS19240 PF01367 5'-3' exonuclease, C-terminal SAM fold LLI13_RS19240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LLI13_RS19245 PF02861 Clp amino terminal domain, pathogenicity island component LLI13_RS19280 PF00171 Aldehyde dehydrogenase family LLI13_RS19290 PF13732 Domain of unknown function (DUF4162) LLI13_RS19290 PF00005 ABC transporter LLI13_RS19295 PF01061 ABC-2 type transporter LLI13_RS19300 PF00654 Voltage gated chloride channel LLI13_RS19305 PF07739 TipAS antibiotic-recognition domain LLI13_RS19305 PF13411 MerR HTH family regulatory protein LLI13_RS19310 PF09335 SNARE associated Golgi protein LLI13_RS19320 PF00719 Inorganic pyrophosphatase LLI13_RS19325 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LLI13_RS19335 PF09179 TilS substrate binding domain LLI13_RS19335 PF01171 PP-loop family LLI13_RS19340 PF00156 Phosphoribosyl transferase domain LLI13_RS19345 PF01434 Peptidase family M41 LLI13_RS19345 PF06480 FtsH Extracellular LLI13_RS19345 PF17862 AAA+ lid domain LLI13_RS19345 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS19350 PF01227 GTP cyclohydrolase I LLI13_RS19360 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LLI13_RS19365 PF02152 Dihydroneopterin aldolase LLI13_RS19375 PF00809 Pterin binding enzyme LLI13_RS19395 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LLI13_RS19405 PF07730 Histidine kinase LLI13_RS19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS19405 PF05384 Sensor protein DegS LLI13_RS19410 PF00072 Response regulator receiver domain LLI13_RS19410 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS19435 PF02569 Pantoate-beta-alanine ligase LLI13_RS19440 PF02910 Fumarate reductase flavoprotein C-term LLI13_RS19440 PF00890 FAD binding domain LLI13_RS19445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LLI13_RS19445 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LLI13_RS19450 PF03309 Type III pantothenate kinase LLI13_RS19470 PF00583 Acetyltransferase (GNAT) family LLI13_RS19475 PF11774 Lsr2 LLI13_RS19485 PF10431 C-terminal, D2-small domain, of ClpB protein LLI13_RS19485 PF02861 Clp amino terminal domain, pathogenicity island component LLI13_RS19485 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS19485 PF07724 AAA domain (Cdc48 subfamily) LLI13_RS19485 PF17871 AAA lid domain LLI13_RS19495 PF01476 LysM domain LLI13_RS19495 PF08525 Opacity-associated protein A N-terminal motif LLI13_RS19495 PF01551 Peptidase family M23 LLI13_RS19500 PF08361 MAATS-type transcriptional repressor, C-terminal region LLI13_RS19500 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS19505 PF07690 Major Facilitator Superfamily LLI13_RS19510 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS19510 PF00672 HAMP domain LLI13_RS19510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS19515 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS19515 PF00072 Response regulator receiver domain LLI13_RS19525 PF04542 Sigma-70 region 2 LLI13_RS19525 PF08281 Sigma-70, region 4 LLI13_RS19530 PF00633 Helix-hairpin-helix motif LLI13_RS19530 PF00730 HhH-GPD superfamily base excision DNA repair protein LLI13_RS19530 PF10576 Iron-sulfur binding domain of endonuclease III LLI13_RS19540 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS19540 PF00072 Response regulator receiver domain LLI13_RS19545 PF01569 PAP2 superfamily LLI13_RS19555 PF12826 Helix-hairpin-helix motif LLI13_RS19555 PF10635 DisA bacterial checkpoint controller linker region LLI13_RS19555 PF02457 DisA bacterial checkpoint controller nucleotide-binding LLI13_RS19560 PF18073 Rubredoxin metal binding domain LLI13_RS19575 PF02541 Ppx/GppA phosphatase family LLI13_RS19580 PF01261 Xylose isomerase-like TIM barrel LLI13_RS19585 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS19590 PF00920 Dehydratase family LLI13_RS19595 PF00400 WD domain, G-beta repeat LLI13_RS19595 PF00069 Protein kinase domain LLI13_RS19610 PF08241 Methyltransferase domain LLI13_RS19615 PF00005 ABC transporter LLI13_RS19625 PF14748 Pyrroline-5-carboxylate reductase dimerisation LLI13_RS19625 PF03807 NADP oxidoreductase coenzyme F420-dependent LLI13_RS19630 PF00857 Isochorismatase family LLI13_RS19635 PF12833 Helix-turn-helix domain LLI13_RS19635 PF01965 DJ-1/PfpI family LLI13_RS19640 PF00579 tRNA synthetases class I (W and Y) LLI13_RS19670 PF00850 Histone deacetylase domain LLI13_RS19680 PF12728 Helix-turn-helix domain LLI13_RS19690 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS19695 PF01553 Acyltransferase LLI13_RS19705 PF08281 Sigma-70, region 4 LLI13_RS19705 PF04542 Sigma-70 region 2 LLI13_RS19720 PF05768 Glutaredoxin-like domain (DUF836) LLI13_RS19725 PF06971 Putative DNA-binding protein N-terminus LLI13_RS19725 PF02629 CoA binding domain LLI13_RS19730 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LLI13_RS19730 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LLI13_RS19730 PF01488 Shikimate / quinate 5-dehydrogenase LLI13_RS19735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LLI13_RS19735 PF03900 Porphobilinogen deaminase, C-terminal domain LLI13_RS19740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLI13_RS19740 PF14824 Sirohaem biosynthesis protein central LLI13_RS19740 PF10414 Sirohaem synthase dimerisation region LLI13_RS19805 PF00490 Delta-aminolevulinic acid dehydratase LLI13_RS19820 PF00083 Sugar (and other) transporter LLI13_RS19825 PF04909 Amidohydrolase LLI13_RS19830 PF04909 Amidohydrolase LLI13_RS19835 PF00072 Response regulator receiver domain LLI13_RS19835 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS19840 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS19840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS19840 PF00672 HAMP domain LLI13_RS19855 PF00155 Aminotransferase class I and II LLI13_RS19860 PF00750 tRNA synthetases class I (R) LLI13_RS19860 PF03485 Arginyl tRNA synthetase N terminal domain LLI13_RS19860 PF05746 DALR anticodon binding domain LLI13_RS19865 PF01921 tRNA synthetases class I (K) LLI13_RS19885 PF01139 tRNA-splicing ligase RtcB LLI13_RS19890 PF00106 short chain dehydrogenase LLI13_RS19895 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LLI13_RS19900 PF01047 MarR family LLI13_RS19905 PF00296 Luciferase-like monooxygenase LLI13_RS19910 PF03358 NADPH-dependent FMN reductase LLI13_RS19915 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS19915 PF00072 Response regulator receiver domain LLI13_RS19920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS19920 PF00672 HAMP domain LLI13_RS19920 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS19925 PF01546 Peptidase family M20/M25/M40 LLI13_RS19925 PF07687 Peptidase dimerisation domain LLI13_RS19930 PF00188 Cysteine-rich secretory protein family LLI13_RS19955 PF00005 ABC transporter LLI13_RS19955 PF13732 Domain of unknown function (DUF4162) LLI13_RS19960 PF01061 ABC-2 type transporter LLI13_RS19965 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS19965 PF00072 Response regulator receiver domain LLI13_RS19970 PF07730 Histidine kinase LLI13_RS19985 PF00202 Aminotransferase class-III LLI13_RS19990 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS20000 PF00578 AhpC/TSA family LLI13_RS20005 PF02683 Cytochrome C biogenesis protein transmembrane region LLI13_RS20010 PF05140 ResB-like family LLI13_RS20015 PF01578 Cytochrome C assembly protein LLI13_RS20020 PF00400 WD domain, G-beta repeat LLI13_RS20020 PF00069 Protein kinase domain LLI13_RS20025 PF00069 Protein kinase domain LLI13_RS20025 PF00400 WD domain, G-beta repeat LLI13_RS20040 PF00069 Protein kinase domain LLI13_RS20040 PF00400 WD domain, G-beta repeat LLI13_RS20050 PF00069 Protein kinase domain LLI13_RS20050 PF00400 WD domain, G-beta repeat LLI13_RS20060 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LLI13_RS20065 PF01040 UbiA prenyltransferase family LLI13_RS20075 PF02441 Flavoprotein LLI13_RS20085 PF04055 Radical SAM superfamily LLI13_RS20100 PF00375 Sodium:dicarboxylate symporter family LLI13_RS20130 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS20130 PF13977 BetI-type transcriptional repressor, C-terminal LLI13_RS20145 PF02803 Thiolase, C-terminal domain LLI13_RS20145 PF00108 Thiolase, N-terminal domain LLI13_RS20150 PF00501 AMP-binding enzyme LLI13_RS20155 PF00313 'Cold-shock' DNA-binding domain LLI13_RS20160 PF02621 Menaquinone biosynthesis LLI13_RS20165 PF00069 Protein kinase domain LLI13_RS20165 PF00400 WD domain, G-beta repeat LLI13_RS20170 PF01580 FtsK/SpoIIIE family LLI13_RS20245 PF00437 Type II/IV secretion system protein LLI13_RS20295 PF04055 Radical SAM superfamily LLI13_RS20305 PF02839 Carbohydrate binding domain LLI13_RS20315 PF00535 Glycosyl transferase family 2 LLI13_RS20325 PF01209 ubiE/COQ5 methyltransferase family LLI13_RS20340 PF01494 FAD binding domain LLI13_RS20345 PF08239 Bacterial SH3 domain LLI13_RS20345 PF00877 NlpC/P60 family LLI13_RS20345 PF01476 LysM domain LLI13_RS20350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LLI13_RS20355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LLI13_RS20360 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LLI13_RS20365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LLI13_RS20375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LLI13_RS20375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LLI13_RS20375 PF10531 SLBB domain LLI13_RS20380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LLI13_RS20380 PF01568 Molydopterin dinucleotide binding domain LLI13_RS20380 PF00384 Molybdopterin oxidoreductase LLI13_RS20380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LLI13_RS20385 PF00146 NADH dehydrogenase LLI13_RS20390 PF12838 4Fe-4S dicluster domain LLI13_RS20395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LLI13_RS20400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LLI13_RS20405 PF00361 Proton-conducting membrane transporter LLI13_RS20405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LLI13_RS20410 PF00361 Proton-conducting membrane transporter LLI13_RS20415 PF00361 Proton-conducting membrane transporter LLI13_RS20420 PF00270 DEAD/DEAH box helicase LLI13_RS20420 PF00271 Helicase conserved C-terminal domain LLI13_RS20420 PF00570 HRDC domain LLI13_RS20420 PF16124 RecQ zinc-binding LLI13_RS20420 PF09382 RQC domain LLI13_RS20435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LLI13_RS20485 PF00348 Polyprenyl synthetase LLI13_RS20495 PF00005 ABC transporter LLI13_RS20510 PF03358 NADPH-dependent FMN reductase LLI13_RS20515 PF01425 Amidase LLI13_RS20530 PF00115 Cytochrome C and Quinol oxidase polypeptide I LLI13_RS20550 PF00892 EamA-like transporter family LLI13_RS20560 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS20560 PF03704 Bacterial transcriptional activator domain LLI13_RS20560 PF00931 NB-ARC domain LLI13_RS20565 PF05368 NmrA-like family LLI13_RS20570 PF01638 HxlR-like helix-turn-helix LLI13_RS20575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS20580 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LLI13_RS20580 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LLI13_RS20580 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LLI13_RS20585 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS20585 PF00072 Response regulator receiver domain LLI13_RS20600 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LLI13_RS20605 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LLI13_RS20610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LLI13_RS20615 PF00146 NADH dehydrogenase LLI13_RS20620 PF00037 4Fe-4S binding domain LLI13_RS20625 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LLI13_RS20630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LLI13_RS20635 PF00361 Proton-conducting membrane transporter LLI13_RS20635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LLI13_RS20640 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LLI13_RS20640 PF00361 Proton-conducting membrane transporter LLI13_RS20645 PF00361 Proton-conducting membrane transporter LLI13_RS20650 PF01435 Peptidase family M48 LLI13_RS20655 PF03733 Inner membrane component domain LLI13_RS20665 PF13520 Amino acid permease LLI13_RS20670 PF04226 Transglycosylase associated protein LLI13_RS20675 PF04461 Protein of unknown function (DUF520) LLI13_RS20750 PF00293 NUDIX domain LLI13_RS20775 PF13460 NAD(P)H-binding LLI13_RS20795 PF00471 Ribosomal protein L33 LLI13_RS20800 PF13452 N-terminal half of MaoC dehydratase LLI13_RS20810 PF01565 FAD binding domain LLI13_RS20810 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LLI13_RS20815 PF00962 Adenosine/AMP deaminase LLI13_RS20820 PF00155 Aminotransferase class I and II LLI13_RS20830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LLI13_RS20835 PF02357 Transcription termination factor nusG LLI13_RS20840 PF03946 Ribosomal protein L11, N-terminal domain LLI13_RS20840 PF00298 Ribosomal protein L11, RNA binding domain LLI13_RS20845 PF00687 Ribosomal protein L1p/L10e family LLI13_RS20855 PF00466 Ribosomal protein L10 LLI13_RS20860 PF00542 Ribosomal protein L7/L12 C-terminal domain LLI13_RS20860 PF16320 Ribosomal protein L7/L12 dimerisation domain LLI13_RS20865 PF00562 RNA polymerase Rpb2, domain 6 LLI13_RS20865 PF10385 RNA polymerase beta subunit external 1 domain LLI13_RS20865 PF04565 RNA polymerase Rpb2, domain 3 LLI13_RS20865 PF04560 RNA polymerase Rpb2, domain 7 LLI13_RS20865 PF04561 RNA polymerase Rpb2, domain 2 LLI13_RS20865 PF04563 RNA polymerase beta subunit LLI13_RS20870 PF04997 RNA polymerase Rpb1, domain 1 LLI13_RS20870 PF00623 RNA polymerase Rpb1, domain 2 LLI13_RS20870 PF04983 RNA polymerase Rpb1, domain 3 LLI13_RS20870 PF05000 RNA polymerase Rpb1, domain 4 LLI13_RS20870 PF04998 RNA polymerase Rpb1, domain 5 LLI13_RS20880 PF00164 Ribosomal protein S12/S23 LLI13_RS20885 PF00177 Ribosomal protein S7p/S5e LLI13_RS20890 PF00009 Elongation factor Tu GTP binding domain LLI13_RS20890 PF03144 Elongation factor Tu domain 2 LLI13_RS20890 PF03764 Elongation factor G, domain IV LLI13_RS20890 PF14492 Elongation Factor G, domain II LLI13_RS20890 PF00679 Elongation factor G C-terminus LLI13_RS20895 PF00009 Elongation factor Tu GTP binding domain LLI13_RS20895 PF03144 Elongation factor Tu domain 2 LLI13_RS20895 PF03143 Elongation factor Tu C-terminal domain LLI13_RS20920 PF00248 Aldo/keto reductase family LLI13_RS20935 PF00072 Response regulator receiver domain LLI13_RS20935 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS20940 PF07730 Histidine kinase LLI13_RS20945 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LLI13_RS20945 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LLI13_RS20990 PF00338 Ribosomal protein S10p/S20e LLI13_RS20995 PF00297 Ribosomal protein L3 LLI13_RS21000 PF00573 Ribosomal protein L4/L1 family LLI13_RS21005 PF00276 Ribosomal protein L23 LLI13_RS21010 PF00181 Ribosomal Proteins L2, RNA binding domain LLI13_RS21010 PF03947 Ribosomal Proteins L2, C-terminal domain LLI13_RS21015 PF00203 Ribosomal protein S19 LLI13_RS21020 PF00237 Ribosomal protein L22p/L17e LLI13_RS21025 PF07650 KH domain LLI13_RS21025 PF00189 Ribosomal protein S3, C-terminal domain LLI13_RS21030 PF00252 Ribosomal protein L16p/L10e LLI13_RS21035 PF00831 Ribosomal L29 protein LLI13_RS21040 PF00366 Ribosomal protein S17 LLI13_RS21045 PF00238 Ribosomal protein L14p/L23e LLI13_RS21050 PF00467 KOW motif LLI13_RS21050 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LLI13_RS21055 PF00281 Ribosomal protein L5 LLI13_RS21055 PF00673 ribosomal L5P family C-terminus LLI13_RS21060 PF00253 Ribosomal protein S14p/S29e LLI13_RS21065 PF00410 Ribosomal protein S8 LLI13_RS21070 PF00347 Ribosomal protein L6 LLI13_RS21075 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LLI13_RS21080 PF00333 Ribosomal protein S5, N-terminal domain LLI13_RS21080 PF03719 Ribosomal protein S5, C-terminal domain LLI13_RS21085 PF00327 Ribosomal protein L30p/L7e LLI13_RS21090 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LLI13_RS21095 PF00344 SecY translocase LLI13_RS21100 PF05191 Adenylate kinase, active site lid LLI13_RS21105 PF00557 Metallopeptidase family M24 LLI13_RS21110 PF01176 Translation initiation factor 1A / IF-1 LLI13_RS21115 PF00444 Ribosomal protein L36 LLI13_RS21120 PF00416 Ribosomal protein S13/S18 LLI13_RS21125 PF00411 Ribosomal protein S11 LLI13_RS21130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LLI13_RS21130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LLI13_RS21130 PF01000 RNA polymerase Rpb3/RpoA insert domain LLI13_RS21135 PF01196 Ribosomal protein L17 LLI13_RS21140 PF01416 tRNA pseudouridine synthase LLI13_RS21150 PF09587 Bacterial capsule synthesis protein PGA_cap LLI13_RS21160 PF08245 Mur ligase middle domain LLI13_RS21185 PF00572 Ribosomal protein L13 LLI13_RS21190 PF00380 Ribosomal protein S9/S16 LLI13_RS21195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LLI13_RS21195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LLI13_RS21195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LLI13_RS21195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LLI13_RS21205 PF00485 Phosphoribulokinase / Uridine kinase family LLI13_RS21215 PF01380 SIS domain LLI13_RS21220 PF01648 4'-phosphopantetheinyl transferase superfamily LLI13_RS21225 PF04539 Sigma-70 region 3 LLI13_RS21225 PF04545 Sigma-70, region 4 LLI13_RS21225 PF04542 Sigma-70 region 2 LLI13_RS21235 PF01256 Carbohydrate kinase LLI13_RS21235 PF03853 YjeF-related protein N-terminus LLI13_RS21240 PF01168 Alanine racemase, N-terminal domain LLI13_RS21240 PF00842 Alanine racemase, C-terminal domain LLI13_RS21245 PF00364 Biotin-requiring enzyme LLI13_RS21245 PF00561 alpha/beta hydrolase fold LLI13_RS21250 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LLI13_RS21265 PF00814 Glycoprotease family LLI13_RS21275 PF00814 Glycoprotease family LLI13_RS21295 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS21300 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS21300 PF13399 LytR cell envelope-related transcriptional attenuator LLI13_RS21310 PF08281 Sigma-70, region 4 LLI13_RS21310 PF04542 Sigma-70 region 2 LLI13_RS21315 PF18096 THUMP domain-like LLI13_RS21320 PF01522 Polysaccharide deacetylase LLI13_RS21325 PF01522 Polysaccharide deacetylase LLI13_RS21330 PF00166 Chaperonin 10 Kd subunit LLI13_RS21335 PF00118 TCP-1/cpn60 chaperonin family LLI13_RS21390 PF00106 short chain dehydrogenase LLI13_RS21400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS21400 PF03466 LysR substrate binding domain LLI13_RS21405 PF02467 Transcription factor WhiB LLI13_RS21410 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS21410 PF00072 Response regulator receiver domain LLI13_RS21415 PF04542 Sigma-70 region 2 LLI13_RS21415 PF04545 Sigma-70, region 4 LLI13_RS21420 PF00478 IMP dehydrogenase / GMP reductase domain LLI13_RS21420 PF00571 CBS domain LLI13_RS21425 PF00478 IMP dehydrogenase / GMP reductase domain LLI13_RS21430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LLI13_RS21430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LLI13_RS21430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LLI13_RS21435 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LLI13_RS21435 PF01266 FAD dependent oxidoreductase LLI13_RS21440 PF00144 Beta-lactamase LLI13_RS21445 PF00069 Protein kinase domain LLI13_RS21445 PF03793 PASTA domain LLI13_RS21450 PF00400 WD domain, G-beta repeat LLI13_RS21450 PF00069 Protein kinase domain LLI13_RS21455 PF00069 Protein kinase domain LLI13_RS21460 PF00069 Protein kinase domain LLI13_RS21465 PF00069 Protein kinase domain LLI13_RS21470 PF00171 Aldehyde dehydrogenase family LLI13_RS21475 PF05199 GMC oxidoreductase LLI13_RS21495 PF00117 Glutamine amidotransferase class-I LLI13_RS21495 PF00958 GMP synthase C terminal domain LLI13_RS21495 PF02540 NAD synthase LLI13_RS21505 PF00596 Class II Aldolase and Adducin N-terminal domain LLI13_RS21535 PF00072 Response regulator receiver domain LLI13_RS21535 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS21545 PF00877 NlpC/P60 family LLI13_RS21550 PF00580 UvrD/REP helicase N-terminal domain LLI13_RS21550 PF13361 UvrD-like helicase C-terminal domain LLI13_RS21555 PF01551 Peptidase family M23 LLI13_RS21555 PF04225 Opacity-associated protein A LysM-like domain LLI13_RS21565 PF01642 Methylmalonyl-CoA mutase LLI13_RS21565 PF02310 B12 binding domain LLI13_RS21580 PF07728 AAA domain (dynein-related subfamily) LLI13_RS21590 PF05762 VWA domain containing CoxE-like protein LLI13_RS21600 PF08442 ATP-grasp domain LLI13_RS21600 PF00549 CoA-ligase LLI13_RS21605 PF00549 CoA-ligase LLI13_RS21605 PF02629 CoA binding domain LLI13_RS21625 PF00551 Formyl transferase LLI13_RS21630 PF02142 MGS-like domain LLI13_RS21630 PF01808 AICARFT/IMPCHase bienzyme LLI13_RS21650 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LLI13_RS21650 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LLI13_RS21665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LLI13_RS21665 PF00056 lactate/malate dehydrogenase, NAD binding domain LLI13_RS21670 PF00171 Aldehyde dehydrogenase family LLI13_RS21675 PF05199 GMC oxidoreductase LLI13_RS21675 PF00732 GMC oxidoreductase LLI13_RS21680 PF00571 CBS domain LLI13_RS21680 PF00005 ABC transporter LLI13_RS21685 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS21695 PF02627 Carboxymuconolactone decarboxylase family LLI13_RS21705 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS21705 PF00155 Aminotransferase class I and II LLI13_RS21715 PF03738 Glutathionylspermidine synthase preATP-grasp LLI13_RS21720 PF00464 Serine hydroxymethyltransferase LLI13_RS21730 PF00579 tRNA synthetases class I (W and Y) LLI13_RS21740 PF00106 short chain dehydrogenase LLI13_RS21745 PF01565 FAD binding domain LLI13_RS21750 PF01569 PAP2 superfamily LLI13_RS21755 PF01040 UbiA prenyltransferase family LLI13_RS21765 PF03631 Virulence factor BrkB LLI13_RS21770 PF00768 D-alanyl-D-alanine carboxypeptidase LLI13_RS21780 PF00149 Calcineurin-like phosphoesterase LLI13_RS21785 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS21800 PF13085 2Fe-2S iron-sulfur cluster binding domain LLI13_RS21805 PF00890 FAD binding domain LLI13_RS21805 PF02910 Fumarate reductase flavoprotein C-term LLI13_RS21815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LLI13_RS21825 PF07691 PA14 domain LLI13_RS21825 PF02838 Glycosyl hydrolase family 20, domain 2 LLI13_RS21825 PF00728 Glycosyl hydrolase family 20, catalytic domain LLI13_RS21880 PF01642 Methylmalonyl-CoA mutase LLI13_RS21880 PF02310 B12 binding domain LLI13_RS21890 PF01810 LysE type translocator LLI13_RS21910 PF00535 Glycosyl transferase family 2 LLI13_RS21930 PF00535 Glycosyl transferase family 2 LLI13_RS21940 PF02348 Cytidylyltransferase LLI13_RS21945 PF03102 NeuB family LLI13_RS21945 PF08666 SAF domain LLI13_RS21955 PF04107 Glutamate-cysteine ligase family 2(GCS2) LLI13_RS21955 PF01546 Peptidase family M20/M25/M40 LLI13_RS21960 PF02608 ABC transporter substrate-binding protein PnrA-like LLI13_RS21965 PF02608 ABC transporter substrate-binding protein PnrA-like LLI13_RS21970 PF00005 ABC transporter LLI13_RS21980 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS21985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LLI13_RS21990 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LLI13_RS21990 PF00591 Glycosyl transferase family, a/b domain LLI13_RS21990 PF02885 Glycosyl transferase family, helical bundle domain LLI13_RS22010 PF12680 SnoaL-like domain LLI13_RS22010 PF08281 Sigma-70, region 4 LLI13_RS22010 PF04542 Sigma-70 region 2 LLI13_RS22015 PF07690 Major Facilitator Superfamily LLI13_RS22020 PF03466 LysR substrate binding domain LLI13_RS22020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS22030 PF00962 Adenosine/AMP deaminase LLI13_RS22055 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS22055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS22055 PF00672 HAMP domain LLI13_RS22060 PF00072 Response regulator receiver domain LLI13_RS22060 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS22065 PF04542 Sigma-70 region 2 LLI13_RS22065 PF08281 Sigma-70, region 4 LLI13_RS22080 PF00171 Aldehyde dehydrogenase family LLI13_RS22085 PF00171 Aldehyde dehydrogenase family LLI13_RS22090 PF01791 DeoC/LacD family aldolase LLI13_RS22100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LLI13_RS22100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LLI13_RS22100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LLI13_RS22100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LLI13_RS22105 PF01048 Phosphorylase superfamily LLI13_RS22115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLI13_RS22115 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS22120 PF08220 DeoR-like helix-turn-helix domain LLI13_RS22120 PF00455 DeoR C terminal sensor domain LLI13_RS22125 PF02785 Biotin carboxylase C-terminal domain LLI13_RS22125 PF00364 Biotin-requiring enzyme LLI13_RS22125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLI13_RS22125 PF00289 Biotin carboxylase, N-terminal domain LLI13_RS22135 PF02545 Maf-like protein LLI13_RS22145 PF01039 Carboxyl transferase domain LLI13_RS22150 PF02237 Biotin protein ligase C terminal domain LLI13_RS22150 PF03099 Biotin/lipoate A/B protein ligase family LLI13_RS22150 PF08279 HTH domain LLI13_RS22155 PF16701 Adenylate cyclase regulatory domain LLI13_RS22155 PF00211 Adenylate and Guanylate cyclase catalytic domain LLI13_RS22165 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS22170 PF00990 Diguanylate cyclase, GGDEF domain LLI13_RS22175 PF00221 Aromatic amino acid lyase LLI13_RS22190 PF03734 L,D-transpeptidase catalytic domain LLI13_RS22190 PF17964 Bacterial Ig domain LLI13_RS22200 PF00005 ABC transporter LLI13_RS22205 PF00082 Subtilase family LLI13_RS22205 PF05922 Peptidase inhibitor I9 LLI13_RS22215 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS22215 PF00107 Zinc-binding dehydrogenase LLI13_RS22225 PF13360 PQQ-like domain LLI13_RS22225 PF00069 Protein kinase domain LLI13_RS22235 PF01053 Cys/Met metabolism PLP-dependent enzyme LLI13_RS22250 PF17864 RuvB AAA lid domain LLI13_RS22250 PF05496 Holliday junction DNA helicase RuvB P-loop domain LLI13_RS22250 PF05491 RuvB C-terminal winged helix domain LLI13_RS22255 PF13291 ACT domain LLI13_RS22255 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS22260 PF13732 Domain of unknown function (DUF4162) LLI13_RS22260 PF00005 ABC transporter LLI13_RS22265 PF01061 ABC-2 type transporter LLI13_RS22270 PF01272 Transcription elongation factor, GreA/GreB, C-term LLI13_RS22270 PF03449 Transcription elongation factor, N-terminal LLI13_RS22280 PF02585 GlcNAc-PI de-N-acetylase LLI13_RS22315 PF03190 Protein of unknown function, DUF255 LLI13_RS22340 PF03190 Protein of unknown function, DUF255 LLI13_RS22350 PF03006 Haemolysin-III related LLI13_RS22355 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LLI13_RS22355 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LLI13_RS22380 PF01494 FAD binding domain LLI13_RS22480 PF00561 alpha/beta hydrolase fold LLI13_RS22485 PF10502 Signal peptidase, peptidase S26 LLI13_RS22565 PF00155 Aminotransferase class I and II LLI13_RS22580 PF07969 Amidohydrolase family LLI13_RS22595 PF09339 IclR helix-turn-helix domain LLI13_RS22595 PF01614 Bacterial transcriptional regulator LLI13_RS22600 PF01042 Endoribonuclease L-PSP LLI13_RS22605 PF02447 GntP family permease LLI13_RS22615 PF00246 Zinc carboxypeptidase LLI13_RS22625 PF00704 Glycosyl hydrolases family 18 LLI13_RS22625 PF02018 Carbohydrate binding domain LLI13_RS22625 PF00041 Fibronectin type III domain LLI13_RS22640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LLI13_RS22655 PF00437 Type II/IV secretion system protein LLI13_RS22675 PF00072 Response regulator receiver domain LLI13_RS22675 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS22740 PF08241 Methyltransferase domain LLI13_RS22745 PF01255 Putative undecaprenyl diphosphate synthase LLI13_RS22750 PF02562 PhoH-like protein LLI13_RS22750 PF13638 PIN domain LLI13_RS22760 PF01594 AI-2E family transporter LLI13_RS22765 PF02627 Carboxymuconolactone decarboxylase family LLI13_RS22770 PF00578 AhpC/TSA family LLI13_RS22775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS22775 PF03466 LysR substrate binding domain LLI13_RS22785 PF00005 ABC transporter LLI13_RS22805 PF00912 Transglycosylase LLI13_RS22805 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS22820 PF10415 Fumarase C C-terminus LLI13_RS22820 PF00206 Lyase LLI13_RS22825 PF04389 Peptidase family M28 LLI13_RS22825 PF01447 Thermolysin metallopeptidase, catalytic domain LLI13_RS22825 PF02868 Thermolysin metallopeptidase, alpha-helical domain LLI13_RS22840 PF00067 Cytochrome P450 LLI13_RS22850 PF00501 AMP-binding enzyme LLI13_RS22850 PF00550 Phosphopantetheine attachment site LLI13_RS22850 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS22855 PF01209 ubiE/COQ5 methyltransferase family LLI13_RS22865 PF00067 Cytochrome P450 LLI13_RS22870 PF05683 Fumarase C-terminus LLI13_RS22870 PF05681 Fumarate hydratase (Fumerase) LLI13_RS22880 PF02467 Transcription factor WhiB LLI13_RS22885 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LLI13_RS22895 PF00881 Nitroreductase family LLI13_RS22900 PF02609 Exonuclease VII small subunit LLI13_RS22905 PF02601 Exonuclease VII, large subunit LLI13_RS22905 PF13742 OB-fold nucleic acid binding domain LLI13_RS22910 PF02401 LytB protein LLI13_RS22915 PF00480 ROK family LLI13_RS22925 PF06071 Protein of unknown function (DUF933) LLI13_RS22925 PF01926 50S ribosome-binding GTPase LLI13_RS22955 PF08678 Rsbr N terminal LLI13_RS22955 PF01740 STAS domain LLI13_RS22960 PF01740 STAS domain LLI13_RS22965 PF13581 Histidine kinase-like ATPase domain LLI13_RS22970 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS22970 PF08448 PAS fold LLI13_RS22970 PF13581 Histidine kinase-like ATPase domain LLI13_RS22970 PF13466 STAS domain LLI13_RS22990 PF00082 Subtilase family LLI13_RS22990 PF05922 Peptidase inhibitor I9 LLI13_RS23005 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS23005 PF00155 Aminotransferase class I and II LLI13_RS23015 PF00293 NUDIX domain LLI13_RS23040 PF13183 4Fe-4S dicluster domain LLI13_RS23040 PF13085 2Fe-2S iron-sulfur cluster binding domain LLI13_RS23045 PF02910 Fumarate reductase flavoprotein C-term LLI13_RS23045 PF00890 FAD binding domain LLI13_RS23065 PF00679 Elongation factor G C-terminus LLI13_RS23065 PF14492 Elongation Factor G, domain II LLI13_RS23065 PF00009 Elongation factor Tu GTP binding domain LLI13_RS23065 PF03144 Elongation factor Tu domain 2 LLI13_RS23070 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS23070 PF12911 N-terminal TM domain of oligopeptide transport permease C LLI13_RS23075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLI13_RS23080 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS23085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS23085 PF00005 ABC transporter LLI13_RS23090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS23090 PF00005 ABC transporter LLI13_RS23100 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS23105 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS23105 PF12911 N-terminal TM domain of oligopeptide transport permease C LLI13_RS23110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS23110 PF00005 ABC transporter LLI13_RS23115 PF00005 ABC transporter LLI13_RS23115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS23120 PF00326 Prolyl oligopeptidase family LLI13_RS23120 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LLI13_RS23130 PF01425 Amidase LLI13_RS23135 PF02585 GlcNAc-PI de-N-acetylase LLI13_RS23150 PF07690 Major Facilitator Superfamily LLI13_RS23170 PF00037 4Fe-4S binding domain LLI13_RS23175 PF00155 Aminotransferase class I and II LLI13_RS23190 PF01546 Peptidase family M20/M25/M40 LLI13_RS23190 PF07687 Peptidase dimerisation domain LLI13_RS23195 PF03641 Possible lysine decarboxylase LLI13_RS23200 PF00809 Pterin binding enzyme LLI13_RS23210 PF00117 Glutamine amidotransferase class-I LLI13_RS23210 PF00958 GMP synthase C terminal domain LLI13_RS23210 PF13302 Acetyltransferase (GNAT) domain LLI13_RS23210 PF03352 Methyladenine glycosylase LLI13_RS23210 PF13673 Acetyltransferase (GNAT) domain LLI13_RS23215 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS23225 PF01596 O-methyltransferase LLI13_RS23230 PF08281 Sigma-70, region 4 LLI13_RS23230 PF04542 Sigma-70 region 2 LLI13_RS23240 PF13180 PDZ domain LLI13_RS23245 PF02416 mttA/Hcf106 family LLI13_RS23255 PF01883 Iron-sulfur cluster assembly protein LLI13_RS23255 PF10609 NUBPL iron-transfer P-loop NTPase LLI13_RS23280 PF01544 CorA-like Mg2+ transporter protein LLI13_RS23290 PF07690 Major Facilitator Superfamily LLI13_RS23300 PF02811 PHP domain LLI13_RS23305 PF01914 MarC family integral membrane protein LLI13_RS23315 PF01936 NYN domain LLI13_RS23325 PF00270 DEAD/DEAH box helicase LLI13_RS23325 PF00271 Helicase conserved C-terminal domain LLI13_RS23385 PF00899 ThiF family LLI13_RS23385 PF00581 Rhodanese-like domain LLI13_RS23390 PF00561 alpha/beta hydrolase fold LLI13_RS23395 PF00561 alpha/beta hydrolase fold LLI13_RS23410 PF13361 UvrD-like helicase C-terminal domain LLI13_RS23410 PF00580 UvrD/REP helicase N-terminal domain LLI13_RS23415 PF00580 UvrD/REP helicase N-terminal domain LLI13_RS23415 PF13361 UvrD-like helicase C-terminal domain LLI13_RS23420 PF01546 Peptidase family M20/M25/M40 LLI13_RS23420 PF07687 Peptidase dimerisation domain LLI13_RS23425 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LLI13_RS23425 PF00293 NUDIX domain LLI13_RS23425 PF09297 NADH pyrophosphatase zinc ribbon domain LLI13_RS23430 PF00462 Glutaredoxin LLI13_RS23435 PF00570 HRDC domain LLI13_RS23435 PF00580 UvrD/REP helicase N-terminal domain LLI13_RS23435 PF13361 UvrD-like helicase C-terminal domain LLI13_RS23445 PF02467 Transcription factor WhiB LLI13_RS23460 PF03109 ABC1 family LLI13_RS23505 PF02391 MoaE protein LLI13_RS23515 PF05362 Lon protease (S16) C-terminal proteolytic domain LLI13_RS23515 PF13180 PDZ domain LLI13_RS23525 PF03699 Uncharacterised protein family (UPF0182) LLI13_RS23550 PF00199 Catalase LLI13_RS23550 PF06628 Catalase-related immune-responsive LLI13_RS23560 PF00459 Inositol monophosphatase family LLI13_RS23570 PF00893 Small Multidrug Resistance protein LLI13_RS23575 PF03193 RsgA GTPase LLI13_RS23580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LLI13_RS23590 PF02586 SOS response associated peptidase (SRAP) LLI13_RS23600 PF04542 Sigma-70 region 2 LLI13_RS23600 PF08281 Sigma-70, region 4 LLI13_RS23605 PF13490 Putative zinc-finger LLI13_RS23610 PF01966 HD domain LLI13_RS23625 PF01327 Polypeptide deformylase LLI13_RS23635 PF00067 Cytochrome P450 LLI13_RS23640 PF12833 Helix-turn-helix domain LLI13_RS23650 PF00268 Ribonucleotide reductase, small chain LLI13_RS23655 PF03477 ATP cone domain LLI13_RS23655 PF02867 Ribonucleotide reductase, barrel domain LLI13_RS23655 PF00317 Ribonucleotide reductase, all-alpha domain LLI13_RS23665 PF00474 Sodium:solute symporter family LLI13_RS23675 PF07702 UTRA domain LLI13_RS23675 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS23680 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LLI13_RS23685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS23685 PF12282 Signal transduction histidine kinase LLI13_RS23685 PF07568 Histidine kinase LLI13_RS23690 PF02467 Transcription factor WhiB LLI13_RS23695 PF00781 Diacylglycerol kinase catalytic domain LLI13_RS23705 PF04542 Sigma-70 region 2 LLI13_RS23705 PF04539 Sigma-70 region 3 LLI13_RS23705 PF04545 Sigma-70, region 4 LLI13_RS23710 PF13581 Histidine kinase-like ATPase domain LLI13_RS23720 PF00999 Sodium/hydrogen exchanger family LLI13_RS23745 PF00348 Polyprenyl synthetase LLI13_RS23750 PF00583 Acetyltransferase (GNAT) family LLI13_RS23760 PF00115 Cytochrome C and Quinol oxidase polypeptide I LLI13_RS23795 PF09055 Nickel-containing superoxide dismutase LLI13_RS23810 PF13847 Methyltransferase domain LLI13_RS23815 PF00005 ABC transporter LLI13_RS23820 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS23825 PF00497 Bacterial extracellular solute-binding proteins, family 3 LLI13_RS23830 PF00390 Malic enzyme, N-terminal domain LLI13_RS23830 PF03949 Malic enzyme, NAD binding domain LLI13_RS23835 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS23835 PF00107 Zinc-binding dehydrogenase LLI13_RS23865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LLI13_RS23865 PF16078 2-oxoglutarate dehydrogenase N-terminus LLI13_RS23865 PF00676 Dehydrogenase E1 component LLI13_RS23865 PF02779 Transketolase, pyrimidine binding domain LLI13_RS23865 PF16870 2-oxoglutarate dehydrogenase C-terminal LLI13_RS23870 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS23870 PF00672 HAMP domain LLI13_RS23870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS23875 PF00072 Response regulator receiver domain LLI13_RS23875 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS23880 PF01795 MraW methylase family LLI13_RS23885 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS23885 PF05362 Lon protease (S16) C-terminal proteolytic domain LLI13_RS23885 PF02190 ATP-dependent protease La (LON) substrate-binding domain LLI13_RS23905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS23905 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS23930 PF00877 NlpC/P60 family LLI13_RS23940 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS23945 PF11583 P-aminobenzoate N-oxygenase AurF LLI13_RS23950 PF00905 Penicillin binding protein transpeptidase domain LLI13_RS23955 PF01098 Cell cycle protein LLI13_RS23975 PF13298 DNA polymerase Ligase (LigD) LLI13_RS23975 PF04679 ATP dependent DNA ligase C terminal region LLI13_RS23975 PF01068 ATP dependent DNA ligase domain LLI13_RS23980 PF02735 Ku70/Ku80 beta-barrel domain LLI13_RS23985 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS23985 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS23990 PF04542 Sigma-70 region 2 LLI13_RS23990 PF04545 Sigma-70, region 4 LLI13_RS24000 PF04542 Sigma-70 region 2 LLI13_RS24000 PF04545 Sigma-70, region 4 LLI13_RS24005 PF10099 Anti-sigma-K factor rskA LLI13_RS24015 PF02469 Fasciclin domain LLI13_RS24050 PF03631 Virulence factor BrkB LLI13_RS24055 PF01740 STAS domain LLI13_RS24070 PF00561 alpha/beta hydrolase fold LLI13_RS24170 PF00145 C-5 cytosine-specific DNA methylase LLI13_RS24210 PF01548 Transposase LLI13_RS24210 PF02371 Transposase IS116/IS110/IS902 family LLI13_RS24225 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS24225 PF07702 UTRA domain LLI13_RS24235 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS24235 PF07702 UTRA domain LLI13_RS24245 PF01580 FtsK/SpoIIIE family LLI13_RS24300 PF00072 Response regulator receiver domain LLI13_RS24300 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS24305 PF05746 DALR anticodon binding domain LLI13_RS24305 PF03485 Arginyl tRNA synthetase N terminal domain LLI13_RS24305 PF00750 tRNA synthetases class I (R) LLI13_RS24310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LLI13_RS24310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LLI13_RS24315 PF01842 ACT domain LLI13_RS24315 PF00742 Homoserine dehydrogenase LLI13_RS24315 PF03447 Homoserine dehydrogenase, NAD binding domain LLI13_RS24320 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS24325 PF00288 GHMP kinases N terminal domain LLI13_RS24330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LLI13_RS24330 PF07498 Rho termination factor, N-terminal domain LLI13_RS24330 PF07497 Rho termination factor, RNA-binding domain LLI13_RS24335 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS24340 PF01197 Ribosomal protein L31 LLI13_RS24345 PF00472 RF-1 domain LLI13_RS24345 PF03462 PCRF domain LLI13_RS24350 PF17827 PrmC N-terminal domain LLI13_RS24350 PF13649 Methyltransferase domain LLI13_RS24355 PF01300 Telomere recombination LLI13_RS24360 PF01451 Low molecular weight phosphotyrosine protein phosphatase LLI13_RS24365 PF00464 Serine hydroxymethyltransferase LLI13_RS24370 PF00953 Glycosyl transferase family 4 LLI13_RS24380 PF00119 ATP synthase A chain LLI13_RS24385 PF00137 ATP synthase subunit C LLI13_RS24390 PF00430 ATP synthase B/B' CF(0) LLI13_RS24395 PF00213 ATP synthase delta (OSCP) subunit LLI13_RS24400 PF00306 ATP synthase alpha/beta chain, C terminal domain LLI13_RS24400 PF02874 ATP synthase alpha/beta family, beta-barrel domain LLI13_RS24400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LLI13_RS24405 PF00231 ATP synthase LLI13_RS24410 PF02874 ATP synthase alpha/beta family, beta-barrel domain LLI13_RS24410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LLI13_RS24415 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LLI13_RS24425 PF00553 Cellulose binding domain LLI13_RS24425 PF00041 Fibronectin type III domain LLI13_RS24425 PF00704 Glycosyl hydrolases family 18 LLI13_RS24430 PF00072 Response regulator receiver domain LLI13_RS24430 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS24435 PF07730 Histidine kinase LLI13_RS24445 PF01923 Cobalamin adenosyltransferase LLI13_RS24455 PF13732 Domain of unknown function (DUF4162) LLI13_RS24455 PF00005 ABC transporter LLI13_RS24460 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS24465 PF01471 Putative peptidoglycan binding domain LLI13_RS24465 PF08291 Peptidase M15 LLI13_RS24470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS24470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS24485 PF01939 Endonuclease NucS LLI13_RS24495 PF00296 Luciferase-like monooxygenase LLI13_RS24510 PF00005 ABC transporter LLI13_RS24520 PF00005 ABC transporter LLI13_RS24540 PF02803 Thiolase, C-terminal domain LLI13_RS24540 PF00108 Thiolase, N-terminal domain LLI13_RS24555 PF00072 Response regulator receiver domain LLI13_RS24555 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS24560 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS24560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS24560 PF00672 HAMP domain LLI13_RS24590 PF01910 Thiamine-binding protein LLI13_RS24610 PF02310 B12 binding domain LLI13_RS24610 PF01642 Methylmalonyl-CoA mutase LLI13_RS24620 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS24620 PF16859 Tetracyclin repressor-like, C-terminal domain LLI13_RS24625 PF00085 Thioredoxin LLI13_RS24645 PF02887 Pyruvate kinase, alpha/beta domain LLI13_RS24645 PF00224 Pyruvate kinase, barrel domain LLI13_RS24650 PF00871 Acetokinase family LLI13_RS24655 PF01515 Phosphate acetyl/butaryl transferase LLI13_RS24655 PF07085 DRTGG domain LLI13_RS24660 PF00365 Phosphofructokinase LLI13_RS24670 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS24675 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS24680 PF01547 Bacterial extracellular solute-binding protein LLI13_RS24685 PF00072 Response regulator receiver domain LLI13_RS24690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS24690 PF00989 PAS fold LLI13_RS24690 PF17203 Single cache domain 3 LLI13_RS24690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LLI13_RS24695 PF00375 Sodium:dicarboxylate symporter family LLI13_RS24700 PF13411 MerR HTH family regulatory protein LLI13_RS24705 PF00085 Thioredoxin LLI13_RS24715 PF00128 Alpha amylase, catalytic domain LLI13_RS24715 PF02806 Alpha amylase, C-terminal all-beta domain LLI13_RS24715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LLI13_RS24720 PF18085 Maltokinase N-terminal cap domain LLI13_RS24720 PF01636 Phosphotransferase enzyme family LLI13_RS24730 PF11896 Domain of unknown function (DUF3416) LLI13_RS24735 PF00343 Carbohydrate phosphorylase LLI13_RS24735 PF11897 Protein of unknown function (DUF3417) LLI13_RS24745 PF01447 Thermolysin metallopeptidase, catalytic domain LLI13_RS24745 PF02868 Thermolysin metallopeptidase, alpha-helical domain LLI13_RS24745 PF01483 Proprotein convertase P-domain LLI13_RS24745 PF07504 Fungalysin/Thermolysin Propeptide Motif LLI13_RS24750 PF07504 Fungalysin/Thermolysin Propeptide Motif LLI13_RS24750 PF01483 Proprotein convertase P-domain LLI13_RS24750 PF01447 Thermolysin metallopeptidase, catalytic domain LLI13_RS24750 PF02868 Thermolysin metallopeptidase, alpha-helical domain LLI13_RS24755 PF00664 ABC transporter transmembrane region LLI13_RS24755 PF00005 ABC transporter LLI13_RS24760 PF00005 ABC transporter LLI13_RS24760 PF00664 ABC transporter transmembrane region LLI13_RS24765 PF00664 ABC transporter transmembrane region LLI13_RS24765 PF00005 ABC transporter LLI13_RS24770 PF00664 ABC transporter transmembrane region LLI13_RS24770 PF00005 ABC transporter LLI13_RS24775 PF00005 ABC transporter LLI13_RS24785 PF07730 Histidine kinase LLI13_RS24790 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS24790 PF00072 Response regulator receiver domain LLI13_RS24795 PF00561 alpha/beta hydrolase fold LLI13_RS24800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LLI13_RS24800 PF00128 Alpha amylase, catalytic domain LLI13_RS24820 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS24835 PF13411 MerR HTH family regulatory protein LLI13_RS24850 PF01183 Glycosyl hydrolases family 25 LLI13_RS24875 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS24875 PF17866 AAA lid domain LLI13_RS24880 PF00082 Subtilase family LLI13_RS24885 PF01580 FtsK/SpoIIIE family LLI13_RS24895 PF05108 Type VII secretion system ESX-1, transport TM domain B LLI13_RS24955 PF03315 Serine dehydratase beta chain LLI13_RS24955 PF03313 Serine dehydratase alpha chain LLI13_RS24960 PF00464 Serine hydroxymethyltransferase LLI13_RS24965 PF01597 Glycine cleavage H-protein LLI13_RS24970 PF01571 Aminomethyltransferase folate-binding domain LLI13_RS24970 PF08669 Glycine cleavage T-protein C-terminal barrel domain LLI13_RS24990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLI13_RS24995 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25000 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25000 PF12911 N-terminal TM domain of oligopeptide transport permease C LLI13_RS25005 PF00005 ABC transporter LLI13_RS25005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS25010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS25010 PF00005 ABC transporter LLI13_RS25015 PF03458 UPF0126 domain LLI13_RS25025 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS25040 PF00266 Aminotransferase class-V LLI13_RS25075 PF00999 Sodium/hydrogen exchanger family LLI13_RS25090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LLI13_RS25090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LLI13_RS25100 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS25105 PF01494 FAD binding domain LLI13_RS25120 PF00501 AMP-binding enzyme LLI13_RS25120 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS25125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS25125 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS25125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS25150 PF17864 RuvB AAA lid domain LLI13_RS25150 PF05491 RuvB C-terminal winged helix domain LLI13_RS25150 PF05496 Holliday junction DNA helicase RuvB P-loop domain LLI13_RS25155 PF13472 GDSL-like Lipase/Acylhydrolase family LLI13_RS25160 PF00005 ABC transporter LLI13_RS25170 PF02553 Cobalt transport protein component CbiN LLI13_RS25175 PF01891 Cobalt uptake substrate-specific transmembrane region LLI13_RS25180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLI13_RS25185 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25190 PF12911 N-terminal TM domain of oligopeptide transport permease C LLI13_RS25190 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS25195 PF00005 ABC transporter LLI13_RS25200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS25200 PF00005 ABC transporter LLI13_RS25215 PF01547 Bacterial extracellular solute-binding protein LLI13_RS25230 PF16918 Protein kinase G tetratricopeptide repeat LLI13_RS25230 PF16919 Protein kinase G rubredoxin domain LLI13_RS25230 PF00069 Protein kinase domain LLI13_RS25295 PF00474 Sodium:solute symporter family LLI13_RS25305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LLI13_RS25320 PF00694 Aconitase C-terminal domain LLI13_RS25320 PF00330 Aconitase family (aconitate hydratase) LLI13_RS25335 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LLI13_RS25335 PF00553 Cellulose binding domain LLI13_RS25345 PF01547 Bacterial extracellular solute-binding protein LLI13_RS25350 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25355 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25360 PF01325 Iron dependent repressor, N-terminal DNA binding domain LLI13_RS25360 PF00480 ROK family LLI13_RS25365 PF13407 Periplasmic binding protein domain LLI13_RS25370 PF00005 ABC transporter LLI13_RS25375 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS25380 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LLI13_RS25380 PF02780 Transketolase, C-terminal domain LLI13_RS25380 PF02779 Transketolase, pyrimidine binding domain LLI13_RS25385 PF13520 Amino acid permease LLI13_RS25400 PF03816 Cell envelope-related transcriptional attenuator domain LLI13_RS25405 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LLI13_RS25425 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS25425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS25425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS25430 PF02803 Thiolase, C-terminal domain LLI13_RS25430 PF00108 Thiolase, N-terminal domain LLI13_RS25435 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS25440 PF00703 Glycosyl hydrolases family 2 LLI13_RS25440 PF16355 Domain of unknown function (DUF4982) LLI13_RS25440 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LLI13_RS25440 PF02837 Glycosyl hydrolases family 2, sugar binding domain LLI13_RS25450 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25455 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25460 PF01612 3'-5' exonuclease LLI13_RS25460 PF00570 HRDC domain LLI13_RS25475 PF01208 Uroporphyrinogen decarboxylase (URO-D) LLI13_RS25480 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS25480 PF13466 STAS domain LLI13_RS25480 PF08448 PAS fold LLI13_RS25480 PF13581 Histidine kinase-like ATPase domain LLI13_RS25485 PF02195 ParB-like nuclease domain LLI13_RS25490 PF02153 Prephenate dehydrogenase LLI13_RS25495 PF02195 ParB-like nuclease domain LLI13_RS25500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLI13_RS25510 PF00155 Aminotransferase class I and II LLI13_RS25510 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS25515 PF00155 Aminotransferase class I and II LLI13_RS25520 PF00155 Aminotransferase class I and II LLI13_RS25525 PF04820 Tryptophan halogenase LLI13_RS25535 PF00005 ABC transporter LLI13_RS25535 PF17850 CysA C-terminal regulatory domain LLI13_RS25535 PF12857 TOBE-like domain LLI13_RS25540 PF00005 ABC transporter LLI13_RS25540 PF00664 ABC transporter transmembrane region LLI13_RS25545 PF12697 Alpha/beta hydrolase family LLI13_RS25555 PF00501 AMP-binding enzyme LLI13_RS25555 PF00550 Phosphopantetheine attachment site LLI13_RS25555 PF00668 Condensation domain LLI13_RS25555 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS25555 PF00975 Thioesterase domain LLI13_RS25560 PF00550 Phosphopantetheine attachment site LLI13_RS25560 PF00668 Condensation domain LLI13_RS25560 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS25560 PF00501 AMP-binding enzyme LLI13_RS25565 PF00975 Thioesterase domain LLI13_RS25565 PF00501 AMP-binding enzyme LLI13_RS25565 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS25565 PF00550 Phosphopantetheine attachment site LLI13_RS25565 PF00668 Condensation domain LLI13_RS25570 PF00975 Thioesterase domain LLI13_RS25580 PF00501 AMP-binding enzyme LLI13_RS25580 PF00668 Condensation domain LLI13_RS25580 PF00550 Phosphopantetheine attachment site LLI13_RS25580 PF00975 Thioesterase domain LLI13_RS25580 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS25585 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS25585 PF00072 Response regulator receiver domain LLI13_RS25590 PF07730 Histidine kinase LLI13_RS25610 PF00501 AMP-binding enzyme LLI13_RS25615 PF03621 MbtH-like protein LLI13_RS25630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLI13_RS25630 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS25640 PF01593 Flavin containing amine oxidoreductase LLI13_RS25645 PF06778 Chlorite dismutase LLI13_RS25650 PF00561 alpha/beta hydrolase fold LLI13_RS25660 PF05114 Protein of unknown function (DUF692) LLI13_RS25665 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal LLI13_RS25665 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal LLI13_RS25680 PF01522 Polysaccharide deacetylase LLI13_RS25685 PF00355 Rieske [2Fe-2S] domain LLI13_RS25700 PF01145 SPFH domain / Band 7 family LLI13_RS25705 PF00916 Sulfate permease family LLI13_RS25705 PF01740 STAS domain LLI13_RS25710 PF00484 Carbonic anhydrase LLI13_RS25730 PF01225 Mur ligase family, catalytic domain LLI13_RS25730 PF02875 Mur ligase family, glutamate ligase domain LLI13_RS25730 PF08245 Mur ligase middle domain LLI13_RS25735 PF01641 SelR domain LLI13_RS25765 PF00535 Glycosyl transferase family 2 LLI13_RS25770 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS25770 PF00072 Response regulator receiver domain LLI13_RS25775 PF00989 PAS fold LLI13_RS25775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS25775 PF00672 HAMP domain LLI13_RS25775 PF18698 Histidine kinase sensor domain LLI13_RS25775 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS25780 PF01370 NAD dependent epimerase/dehydratase family LLI13_RS25785 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS25785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS25785 PF00672 HAMP domain LLI13_RS25790 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS25790 PF00072 Response regulator receiver domain LLI13_RS25795 PF00111 2Fe-2S iron-sulfur cluster binding domain LLI13_RS25795 PF00175 Oxidoreductase NAD-binding domain LLI13_RS25810 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS25810 PF07729 FCD domain LLI13_RS25815 PF07690 Major Facilitator Superfamily LLI13_RS25820 PF02734 DAK2 domain LLI13_RS25820 PF02733 Dak1 domain LLI13_RS25825 PF02502 Ribose/Galactose Isomerase LLI13_RS25830 PF00121 Triosephosphate isomerase LLI13_RS25835 PF01261 Xylose isomerase-like TIM barrel LLI13_RS25840 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LLI13_RS25840 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term LLI13_RS25845 PF00005 ABC transporter LLI13_RS25845 PF00571 CBS domain LLI13_RS25850 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25855 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS25890 PF18416 N-acetylglucosamine binding protein domain 2 LLI13_RS25890 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LLI13_RS25895 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS25895 PF08361 MAATS-type transcriptional repressor, C-terminal region LLI13_RS25915 PF00149 Calcineurin-like phosphoesterase LLI13_RS25920 PF01321 Creatinase/Prolidase N-terminal domain LLI13_RS25920 PF00557 Metallopeptidase family M24 LLI13_RS25930 PF00128 Alpha amylase, catalytic domain LLI13_RS25930 PF11941 Domain of unknown function (DUF3459) LLI13_RS25945 PF00720 Subtilisin inhibitor-like LLI13_RS25955 PF00128 Alpha amylase, catalytic domain LLI13_RS25960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LLI13_RS25960 PF00128 Alpha amylase, catalytic domain LLI13_RS25980 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LLI13_RS25985 PF03176 MMPL family LLI13_RS26000 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS26005 PF00005 ABC transporter LLI13_RS26020 PF00009 Elongation factor Tu GTP binding domain LLI13_RS26025 PF01507 Phosphoadenosine phosphosulfate reductase family LLI13_RS26035 PF01507 Phosphoadenosine phosphosulfate reductase family LLI13_RS26045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LLI13_RS26045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LLI13_RS26065 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS26065 PF18158 Adaptive response protein AidB N-terminal domain LLI13_RS26065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS26080 PF02311 AraC-like ligand binding domain LLI13_RS26080 PF12833 Helix-turn-helix domain LLI13_RS26085 PF12833 Helix-turn-helix domain LLI13_RS26100 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS26105 PF00135 Carboxylesterase family LLI13_RS26140 PF02574 Homocysteine S-methyltransferase LLI13_RS26145 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS26150 PF07690 Major Facilitator Superfamily LLI13_RS26195 PF00657 GDSL-like Lipase/Acylhydrolase LLI13_RS26210 PF00293 NUDIX domain LLI13_RS26210 PF00300 Histidine phosphatase superfamily (branch 1) LLI13_RS26240 PF02929 Beta galactosidase small chain LLI13_RS26240 PF16353 Domain of unknown function(DUF4981) LLI13_RS26240 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LLI13_RS26240 PF02837 Glycosyl hydrolases family 2, sugar binding domain LLI13_RS26245 PF00480 ROK family LLI13_RS26245 PF01047 MarR family LLI13_RS26250 PF04030 D-arabinono-1,4-lactone oxidase LLI13_RS26250 PF01565 FAD binding domain LLI13_RS26260 PF00553 Cellulose binding domain LLI13_RS26260 PF00041 Fibronectin type III domain LLI13_RS26260 PF01341 Glycosyl hydrolases family 6 LLI13_RS26265 PF03193 RsgA GTPase LLI13_RS26270 PF02805 Metal binding domain of Ada LLI13_RS26270 PF06029 AlkA N-terminal domain LLI13_RS26270 PF00730 HhH-GPD superfamily base excision DNA repair protein LLI13_RS26270 PF12833 Helix-turn-helix domain LLI13_RS26275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LLI13_RS26275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LLI13_RS26290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLI13_RS26290 PF00205 Thiamine pyrophosphate enzyme, central domain LLI13_RS26290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS26320 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS26320 PF07729 FCD domain LLI13_RS26330 PF13556 PucR C-terminal helix-turn-helix domain LLI13_RS26330 PF05651 Putative sugar diacid recognition LLI13_RS26330 PF17853 GGDEF-like domain LLI13_RS26335 PF00941 FAD binding domain in molybdopterin dehydrogenase LLI13_RS26335 PF03450 CO dehydrogenase flavoprotein C-terminal domain LLI13_RS26340 PF00111 2Fe-2S iron-sulfur cluster binding domain LLI13_RS26340 PF01799 [2Fe-2S] binding domain LLI13_RS26345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LLI13_RS26345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LLI13_RS26380 PF00534 Glycosyl transferases group 1 LLI13_RS26385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LLI13_RS26385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LLI13_RS26390 PF00535 Glycosyl transferase family 2 LLI13_RS26410 PF00089 Trypsin LLI13_RS26415 PF00072 Response regulator receiver domain LLI13_RS26415 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS26420 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS26420 PF13185 GAF domain LLI13_RS26425 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS26425 PF00501 AMP-binding enzyme LLI13_RS26430 PF00501 AMP-binding enzyme LLI13_RS26430 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS26435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS26435 PF00205 Thiamine pyrophosphate enzyme, central domain LLI13_RS26435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLI13_RS26450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LLI13_RS26450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LLI13_RS26455 PF01261 Xylose isomerase-like TIM barrel LLI13_RS26475 PF00576 HIUase/Transthyretin family LLI13_RS26480 PF01014 Uricase LLI13_RS26485 PF01979 Amidohydrolase family LLI13_RS26495 PF01183 Glycosyl hydrolases family 25 LLI13_RS26560 PF00753 Metallo-beta-lactamase superfamily LLI13_RS26575 PF00155 Aminotransferase class I and II LLI13_RS26580 PF01638 HxlR-like helix-turn-helix LLI13_RS26590 PF13519 von Willebrand factor type A domain LLI13_RS26595 PF04183 IucA / IucC family LLI13_RS26595 PF06276 Ferric iron reductase FhuF-like transporter LLI13_RS26600 PF06276 Ferric iron reductase FhuF-like transporter LLI13_RS26600 PF04183 IucA / IucC family LLI13_RS26610 PF01274 Malate synthase LLI13_RS26625 PF01614 Bacterial transcriptional regulator LLI13_RS26625 PF09339 IclR helix-turn-helix domain LLI13_RS26630 PF01979 Amidohydrolase family LLI13_RS26635 PF03561 Allantoicase repeat LLI13_RS26645 PF00545 ribonuclease LLI13_RS26660 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS26660 PF00072 Response regulator receiver domain LLI13_RS26670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS26670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS26675 PF07702 UTRA domain LLI13_RS26675 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS26685 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS26690 PF00005 ABC transporter LLI13_RS26695 PF00480 ROK family LLI13_RS26705 PF00176 SNF2 family N-terminal domain LLI13_RS26705 PF00271 Helicase conserved C-terminal domain LLI13_RS26705 PF12419 SNF2 Helicase protein LLI13_RS26735 PF01593 Flavin containing amine oxidoreductase LLI13_RS26750 PF01593 Flavin containing amine oxidoreductase LLI13_RS26765 PF01593 Flavin containing amine oxidoreductase LLI13_RS26770 PF00348 Polyprenyl synthetase LLI13_RS26775 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LLI13_RS26780 PF03441 FAD binding domain of DNA photolyase LLI13_RS26780 PF00875 DNA photolyase LLI13_RS26785 PF11066 Protein of unknown function (DUF2867) LLI13_RS26785 PF13460 NAD(P)H-binding LLI13_RS26795 PF00313 'Cold-shock' DNA-binding domain LLI13_RS26800 PF00270 DEAD/DEAH box helicase LLI13_RS26800 PF00271 Helicase conserved C-terminal domain LLI13_RS26810 PF00313 'Cold-shock' DNA-binding domain LLI13_RS26815 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LLI13_RS26815 PF17770 Ribonuclease J C-terminal domain LLI13_RS26815 PF12706 Beta-lactamase superfamily domain LLI13_RS26820 PF01235 Sodium:alanine symporter family LLI13_RS26840 PF00313 'Cold-shock' DNA-binding domain LLI13_RS26860 PF02627 Carboxymuconolactone decarboxylase family LLI13_RS26880 PF03702 Anhydro-N-acetylmuramic acid kinase LLI13_RS26890 PF02861 Clp amino terminal domain, pathogenicity island component LLI13_RS26890 PF10431 C-terminal, D2-small domain, of ClpB protein LLI13_RS26890 PF00004 ATPase family associated with various cellular activities (AAA) LLI13_RS26890 PF17871 AAA lid domain LLI13_RS26890 PF07724 AAA domain (Cdc48 subfamily) LLI13_RS26895 PF00557 Metallopeptidase family M24 LLI13_RS26910 PF00795 Carbon-nitrogen hydrolase LLI13_RS26915 PF00202 Aminotransferase class-III LLI13_RS26920 PF01979 Amidohydrolase family LLI13_RS26930 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LLI13_RS26945 PF10437 Bacterial lipoate protein ligase C-terminus LLI13_RS26945 PF03099 Biotin/lipoate A/B protein ligase family LLI13_RS26950 PF00005 ABC transporter LLI13_RS26950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS26955 PF00005 ABC transporter LLI13_RS26955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS26960 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS26965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLI13_RS26970 PF07729 FCD domain LLI13_RS26975 PF05448 Acetyl xylan esterase (AXE1) LLI13_RS26980 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase LLI13_RS26980 PF13088 BNR repeat-like domain LLI13_RS26980 PF00754 F5/8 type C domain LLI13_RS26985 PF00701 Dihydrodipicolinate synthetase family LLI13_RS26990 PF00480 ROK family LLI13_RS26995 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LLI13_RS27005 PF00459 Inositol monophosphatase family LLI13_RS27015 PF01661 Macro domain LLI13_RS27020 PF02837 Glycosyl hydrolases family 2, sugar binding domain LLI13_RS27020 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LLI13_RS27020 PF00703 Glycosyl hydrolases family 2 LLI13_RS27020 PF02929 Beta galactosidase small chain LLI13_RS27020 PF16353 Domain of unknown function(DUF4981) LLI13_RS27025 PF01022 Bacterial regulatory protein, arsR family LLI13_RS27035 PF02805 Metal binding domain of Ada LLI13_RS27035 PF12833 Helix-turn-helix domain LLI13_RS27035 PF00730 HhH-GPD superfamily base excision DNA repair protein LLI13_RS27035 PF06029 AlkA N-terminal domain LLI13_RS27040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LLI13_RS27040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LLI13_RS27045 PF02146 Sir2 family LLI13_RS27055 PF02595 Glycerate kinase family LLI13_RS27070 PF02666 Phosphatidylserine decarboxylase LLI13_RS27075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS27075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS27075 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS27085 PF03328 HpcH/HpaI aldolase/citrate lyase family LLI13_RS27090 PF02310 B12 binding domain LLI13_RS27090 PF01642 Methylmalonyl-CoA mutase LLI13_RS27095 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS27095 PF00107 Zinc-binding dehydrogenase LLI13_RS27100 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS27100 PF17754 MftR C-terminal domain LLI13_RS27105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS27105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS27120 PF00561 alpha/beta hydrolase fold LLI13_RS27125 PF04055 Radical SAM superfamily LLI13_RS27135 PF07690 Major Facilitator Superfamily LLI13_RS27140 PF13466 STAS domain LLI13_RS27140 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS27140 PF13581 Histidine kinase-like ATPase domain LLI13_RS27140 PF08448 PAS fold LLI13_RS27150 PF04951 D-aminopeptidase LLI13_RS27155 PF01546 Peptidase family M20/M25/M40 LLI13_RS27155 PF07687 Peptidase dimerisation domain LLI13_RS27160 PF07676 WD40-like Beta Propeller Repeat LLI13_RS27160 PF00326 Prolyl oligopeptidase family LLI13_RS27165 PF02016 LD-carboxypeptidase N-terminal domain LLI13_RS27165 PF17676 LD-carboxypeptidase C-terminal domain LLI13_RS27190 PF00296 Luciferase-like monooxygenase LLI13_RS27200 PF00456 Transketolase, thiamine diphosphate binding domain LLI13_RS27200 PF02780 Transketolase, C-terminal domain LLI13_RS27200 PF02779 Transketolase, pyrimidine binding domain LLI13_RS27205 PF04679 ATP dependent DNA ligase C terminal region LLI13_RS27205 PF01068 ATP dependent DNA ligase domain LLI13_RS27205 PF13298 DNA polymerase Ligase (LigD) LLI13_RS27215 PF00741 Gas vesicle protein LLI13_RS27235 PF03364 Polyketide cyclase / dehydrase and lipid transport LLI13_RS27240 PF00741 Gas vesicle protein LLI13_RS27250 PF00741 Gas vesicle protein LLI13_RS27255 PF05121 Gas vesicle protein K LLI13_RS27255 PF00741 Gas vesicle protein LLI13_RS27260 PF08241 Methyltransferase domain LLI13_RS27265 PF12848 ABC transporter LLI13_RS27265 PF00005 ABC transporter LLI13_RS27280 PF01965 DJ-1/PfpI family LLI13_RS27285 PF00571 CBS domain LLI13_RS27295 PF04545 Sigma-70, region 4 LLI13_RS27295 PF04539 Sigma-70 region 3 LLI13_RS27295 PF04542 Sigma-70 region 2 LLI13_RS27310 PF12706 Beta-lactamase superfamily domain LLI13_RS27355 PF00012 Hsp70 protein LLI13_RS27375 PF01329 Pterin 4 alpha carbinolamine dehydratase LLI13_RS27385 PF18370 Rhamnogalacturonan I lyases beta-sheet domain LLI13_RS27395 PF03442 Carbohydrate binding domain X2 LLI13_RS27395 PF00942 Cellulose binding domain LLI13_RS27400 PF02011 Glycosyl hydrolase family 48 LLI13_RS27400 PF00553 Cellulose binding domain LLI13_RS27400 PF00041 Fibronectin type III domain LLI13_RS27405 PF00041 Fibronectin type III domain LLI13_RS27405 PF01341 Glycosyl hydrolases family 6 LLI13_RS27405 PF00553 Cellulose binding domain LLI13_RS27415 PF00106 short chain dehydrogenase LLI13_RS27420 PF00248 Aldo/keto reductase family LLI13_RS27425 PF00501 AMP-binding enzyme LLI13_RS27430 PF03466 LysR substrate binding domain LLI13_RS27430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS27435 PF13593 SBF-like CPA transporter family (DUF4137) LLI13_RS27440 PF02634 FdhD/NarQ family LLI13_RS27445 PF12838 4Fe-4S dicluster domain LLI13_RS27445 PF00384 Molybdopterin oxidoreductase LLI13_RS27445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LLI13_RS27445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LLI13_RS27445 PF01568 Molydopterin dinucleotide binding domain LLI13_RS27450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LLI13_RS27450 PF10531 SLBB domain LLI13_RS27450 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LLI13_RS27455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LLI13_RS27455 PF00384 Molybdopterin oxidoreductase LLI13_RS27455 PF01568 Molydopterin dinucleotide binding domain LLI13_RS27460 PF02558 Ketopantoate reductase PanE/ApbA LLI13_RS27460 PF08546 Ketopantoate reductase PanE/ApbA C terminal LLI13_RS27475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LLI13_RS27475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LLI13_RS27480 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS27480 PF07729 FCD domain LLI13_RS27485 PF00480 ROK family LLI13_RS27490 PF00005 ABC transporter LLI13_RS27495 PF02653 Branched-chain amino acid transport system / permease component LLI13_RS27500 PF13407 Periplasmic binding protein domain LLI13_RS27505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLI13_RS27505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLI13_RS27560 PF07690 Major Facilitator Superfamily LLI13_RS27565 PF13380 CoA binding domain LLI13_RS27565 PF13607 Succinyl-CoA ligase like flavodoxin domain LLI13_RS27570 PF02515 CoA-transferase family III LLI13_RS27575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS27575 PF00205 Thiamine pyrophosphate enzyme, central domain LLI13_RS27575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLI13_RS27580 PF08442 ATP-grasp domain LLI13_RS27580 PF00549 CoA-ligase LLI13_RS27585 PF02629 CoA binding domain LLI13_RS27585 PF00549 CoA-ligase LLI13_RS27595 PF03641 Possible lysine decarboxylase LLI13_RS27600 PF00106 short chain dehydrogenase LLI13_RS27610 PF12826 Helix-hairpin-helix motif LLI13_RS27610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LLI13_RS27610 PF00533 BRCA1 C Terminus (BRCT) domain LLI13_RS27610 PF03120 NAD-dependent DNA ligase OB-fold domain LLI13_RS27610 PF01653 NAD-dependent DNA ligase adenylation domain LLI13_RS27615 PF03707 Bacterial signalling protein N terminal repeat LLI13_RS27615 PF00990 Diguanylate cyclase, GGDEF domain LLI13_RS27615 PF00563 EAL domain LLI13_RS27620 PF02686 Glu-tRNAGln amidotransferase C subunit LLI13_RS27625 PF01425 Amidase LLI13_RS27635 PF02934 GatB/GatE catalytic domain LLI13_RS27635 PF02637 GatB domain LLI13_RS27640 PF01209 ubiE/COQ5 methyltransferase family LLI13_RS27650 PF03176 MMPL family LLI13_RS27655 PF13302 Acetyltransferase (GNAT) domain LLI13_RS27665 PF00072 Response regulator receiver domain LLI13_RS27665 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS27675 PF07995 Glucose / Sorbosone dehydrogenase LLI13_RS27680 PF00248 Aldo/keto reductase family LLI13_RS27685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLI13_RS27690 PF00563 EAL domain LLI13_RS27690 PF00990 Diguanylate cyclase, GGDEF domain LLI13_RS27690 PF03707 Bacterial signalling protein N terminal repeat LLI13_RS27690 PF13188 PAS domain LLI13_RS27695 PF00205 Thiamine pyrophosphate enzyme, central domain LLI13_RS27695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLI13_RS27695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS27700 PF10369 Small subunit of acetolactate synthase LLI13_RS27705 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LLI13_RS27705 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LLI13_RS27710 PF01842 ACT domain LLI13_RS27710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LLI13_RS27710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLI13_RS27715 PF07690 Major Facilitator Superfamily LLI13_RS27725 PF17853 GGDEF-like domain LLI13_RS27725 PF13556 PucR C-terminal helix-turn-helix domain LLI13_RS27730 PF01619 Proline dehydrogenase LLI13_RS27735 PF00171 Aldehyde dehydrogenase family LLI13_RS27740 PF00180 Isocitrate/isopropylmalate dehydrogenase LLI13_RS27745 PF01063 Amino-transferase class IV LLI13_RS27750 PF08502 LeuA allosteric (dimerisation) domain LLI13_RS27750 PF00682 HMGL-like LLI13_RS27760 PF04264 YceI-like domain LLI13_RS27765 PF02310 B12 binding domain LLI13_RS27765 PF04055 Radical SAM superfamily LLI13_RS27770 PF00106 short chain dehydrogenase LLI13_RS27775 PF01039 Carboxyl transferase domain LLI13_RS27795 PF03259 Roadblock/LC7 domain LLI13_RS27815 PF03259 Roadblock/LC7 domain LLI13_RS27820 PF00989 PAS fold LLI13_RS27820 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS27820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS27820 PF00672 HAMP domain LLI13_RS27830 PF01557 Fumarylacetoacetate (FAA) hydrolase family LLI13_RS27835 PF00749 tRNA synthetases class I (E and Q), catalytic domain LLI13_RS27870 PF13411 MerR HTH family regulatory protein LLI13_RS27880 PF01614 Bacterial transcriptional regulator LLI13_RS27880 PF09339 IclR helix-turn-helix domain LLI13_RS27885 PF00330 Aconitase family (aconitate hydratase) LLI13_RS27890 PF00694 Aconitase C-terminal domain LLI13_RS27900 PF00216 Bacterial DNA-binding protein LLI13_RS27910 PF01983 Guanylyl transferase CofC like LLI13_RS27920 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LLI13_RS27920 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LLI13_RS27925 PF07478 D-ala D-ala ligase C-terminus LLI13_RS27925 PF01820 D-ala D-ala ligase N-terminus LLI13_RS27940 PF00586 AIR synthase related protein, N-terminal domain LLI13_RS27940 PF02769 AIR synthase related protein, C-terminal domain LLI13_RS27945 PF08543 Phosphomethylpyrimidine kinase LLI13_RS27950 PF00830 Ribosomal L28 family LLI13_RS27955 PF13684 Dihydroxyacetone kinase family LLI13_RS27955 PF02734 DAK2 domain LLI13_RS27960 PF00270 DEAD/DEAH box helicase LLI13_RS27960 PF00271 Helicase conserved C-terminal domain LLI13_RS27960 PF17191 RecG wedge domain LLI13_RS27970 PF01467 Cytidylyltransferase-like LLI13_RS27980 PF02620 Large ribosomal RNA subunit accumulation protein YceD LLI13_RS27985 PF01783 Ribosomal L32p protein family LLI13_RS27990 PF14622 Ribonuclease-III-like LLI13_RS27990 PF00035 Double-stranded RNA binding motif LLI13_RS27995 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LLI13_RS27995 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LLI13_RS28000 PF01638 HxlR-like helix-turn-helix LLI13_RS28005 PF00188 Cysteine-rich secretory protein family LLI13_RS28010 PF00708 Acylphosphatase LLI13_RS28020 PF06470 SMC proteins Flexible Hinge Domain LLI13_RS28020 PF02463 RecF/RecN/SMC N terminal domain LLI13_RS28025 PF00083 Sugar (and other) transporter LLI13_RS28030 PF00448 SRP54-type protein, GTPase domain LLI13_RS28030 PF02881 SRP54-type protein, helical bundle domain LLI13_RS28045 PF00909 Ammonium Transporter Family LLI13_RS28050 PF00543 Nitrogen regulatory protein P-II LLI13_RS28055 PF08335 GlnD PII-uridylyltransferase LLI13_RS28055 PF01966 HD domain LLI13_RS28055 PF01909 Nucleotidyltransferase domain LLI13_RS28060 PF02978 Signal peptide binding domain LLI13_RS28060 PF02881 SRP54-type protein, helical bundle domain LLI13_RS28060 PF00448 SRP54-type protein, GTPase domain LLI13_RS28075 PF00886 Ribosomal protein S16 LLI13_RS28085 PF05239 PRC-barrel domain LLI13_RS28085 PF01782 RimM N-terminal domain LLI13_RS28090 PF01746 tRNA (Guanine-1)-methyltransferase LLI13_RS28095 PF01245 Ribosomal protein L19 LLI13_RS28100 PF10502 Signal peptidase, peptidase S26 LLI13_RS28110 PF10502 Signal peptidase, peptidase S26 LLI13_RS28115 PF10502 Signal peptidase, peptidase S26 LLI13_RS28120 PF00293 NUDIX domain LLI13_RS28125 PF10611 Protein of unknown function (DUF2469) LLI13_RS28130 PF02021 Uncharacterised protein family UPF0102 LLI13_RS28135 PF13335 Magnesium chelatase, subunit ChlI C-terminal LLI13_RS28135 PF01078 Magnesium chelatase, subunit ChlI LLI13_RS28140 PF17782 DprA winged helix domain LLI13_RS28140 PF02481 DNA recombination-mediator protein A LLI13_RS28145 PF04545 Sigma-70, region 4 LLI13_RS28145 PF04539 Sigma-70 region 3 LLI13_RS28145 PF04542 Sigma-70 region 2 LLI13_RS28155 PF01551 Peptidase family M23 LLI13_RS28160 PF00318 Ribosomal protein S2 LLI13_RS28165 PF00889 Elongation factor TS LLI13_RS28170 PF00696 Amino acid kinase family LLI13_RS28175 PF01765 Ribosome recycling factor LLI13_RS28190 PF04055 Radical SAM superfamily LLI13_RS28200 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28205 PF08402 TOBE domain LLI13_RS28205 PF00005 ABC transporter LLI13_RS28235 PF00005 ABC transporter LLI13_RS28240 PF00202 Aminotransferase class-III LLI13_RS28250 PF00171 Aldehyde dehydrogenase family LLI13_RS28260 PF03009 Glycerophosphoryl diester phosphodiesterase family LLI13_RS28265 PF00962 Adenosine/AMP deaminase LLI13_RS28285 PF00171 Aldehyde dehydrogenase family LLI13_RS28295 PF00005 ABC transporter LLI13_RS28295 PF08402 TOBE domain LLI13_RS28300 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28305 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28310 PF01266 FAD dependent oxidoreductase LLI13_RS28320 PF00202 Aminotransferase class-III LLI13_RS28330 PF13556 PucR C-terminal helix-turn-helix domain LLI13_RS28330 PF07905 Purine catabolism regulatory protein-like family LLI13_RS28330 PF17853 GGDEF-like domain LLI13_RS28335 PF00171 Aldehyde dehydrogenase family LLI13_RS28340 PF07691 PA14 domain LLI13_RS28340 PF01915 Glycosyl hydrolase family 3 C-terminal domain LLI13_RS28340 PF14310 Fibronectin type III-like domain LLI13_RS28340 PF00933 Glycosyl hydrolase family 3 N terminal domain LLI13_RS28350 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28355 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28360 PF02449 Beta-galactosidase LLI13_RS28360 PF08533 Beta-galactosidase C-terminal domain LLI13_RS28360 PF08532 Beta-galactosidase trimerisation domain LLI13_RS28375 PF00356 Bacterial regulatory proteins, lacI family LLI13_RS28380 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS28380 PF00072 Response regulator receiver domain LLI13_RS28385 PF07730 Histidine kinase LLI13_RS28385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS28395 PF02687 FtsX-like permease family LLI13_RS28395 PF12704 MacB-like periplasmic core domain LLI13_RS28395 PF00005 ABC transporter LLI13_RS28400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS28400 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS28400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS28405 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LLI13_RS28405 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LLI13_RS28405 PF13288 DXP reductoisomerase C-terminal domain LLI13_RS28410 PF17820 PDZ domain LLI13_RS28410 PF02163 Peptidase family M50 LLI13_RS28415 PF04551 GcpE protein LLI13_RS28430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LLI13_RS28430 PF03129 Anticodon binding domain LLI13_RS28430 PF04073 Aminoacyl-tRNA editing domain LLI13_RS28435 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LLI13_RS28450 PF02576 RimP N-terminal domain LLI13_RS28450 PF17384 RimP C-terminal SH3 domain LLI13_RS28455 PF13184 NusA-like KH domain LLI13_RS28455 PF08529 NusA N-terminal domain LLI13_RS28465 PF11987 Translation-initiation factor 2 LLI13_RS28465 PF00009 Elongation factor Tu GTP binding domain LLI13_RS28465 PF04760 Translation initiation factor IF-2, N-terminal region LLI13_RS28475 PF02033 Ribosome-binding factor A LLI13_RS28480 PF01509 TruB family pseudouridylate synthase (N terminal domain) LLI13_RS28480 PF16198 tRNA pseudouridylate synthase B C-terminal domain LLI13_RS28480 PF09142 tRNA Pseudouridine synthase II, C terminal LLI13_RS28490 PF01687 Riboflavin kinase LLI13_RS28490 PF06574 FAD synthetase LLI13_RS28495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS28495 PF00005 ABC transporter LLI13_RS28500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS28500 PF00005 ABC transporter LLI13_RS28505 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28505 PF12911 N-terminal TM domain of oligopeptide transport permease C LLI13_RS28510 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLI13_RS28520 PF10609 NUBPL iron-transfer P-loop NTPase LLI13_RS28530 PF00312 Ribosomal protein S15 LLI13_RS28535 PF01138 3' exoribonuclease family, domain 1 LLI13_RS28535 PF00575 S1 RNA binding domain LLI13_RS28535 PF00013 KH domain LLI13_RS28535 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LLI13_RS28540 PF00675 Insulinase (Peptidase family M16) LLI13_RS28540 PF05193 Peptidase M16 inactive domain LLI13_RS28545 PF05173 Dihydrodipicolinate reductase, C-terminus LLI13_RS28545 PF01113 Dihydrodipicolinate reductase, N-terminus LLI13_RS28565 PF00701 Dihydrodipicolinate synthetase family LLI13_RS28570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LLI13_RS28570 PF12706 Beta-lactamase superfamily domain LLI13_RS28570 PF17770 Ribonuclease J C-terminal domain LLI13_RS28590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LLI13_RS28600 PF07228 Stage II sporulation protein E (SpoIIE) LLI13_RS28600 PF00672 HAMP domain LLI13_RS28605 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS28605 PF09308 LuxQ, periplasmic LLI13_RS28605 PF00072 Response regulator receiver domain LLI13_RS28605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS28610 PF00072 Response regulator receiver domain LLI13_RS28615 PF17854 FtsK alpha domain LLI13_RS28615 PF09397 Ftsk gamma domain LLI13_RS28615 PF01580 FtsK/SpoIIIE family LLI13_RS28625 PF04055 Radical SAM superfamily LLI13_RS28625 PF00919 Uncharacterized protein family UPF0004 LLI13_RS28625 PF18693 TRAM domain LLI13_RS28630 PF01066 CDP-alcohol phosphatidyltransferase LLI13_RS28635 PF00994 Probable molybdopterin binding domain LLI13_RS28635 PF18146 Damage-inducible protein CinA KH domain LLI13_RS28635 PF02464 Competence-damaged protein LLI13_RS28645 PF00210 Ferritin-like domain LLI13_RS28655 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LLI13_RS28655 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LLI13_RS28660 PF08494 DEAD/H associated LLI13_RS28660 PF00270 DEAD/DEAH box helicase LLI13_RS28660 PF00271 Helicase conserved C-terminal domain LLI13_RS28665 PF02311 AraC-like ligand binding domain LLI13_RS28665 PF12833 Helix-turn-helix domain LLI13_RS28690 PF01594 AI-2E family transporter LLI13_RS28695 PF00154 recA bacterial DNA recombination protein LLI13_RS28700 PF02631 RecX family LLI13_RS28725 PF03741 Integral membrane protein TerC family LLI13_RS28740 PF01494 FAD binding domain LLI13_RS28745 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28750 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS28755 PF00497 Bacterial extracellular solute-binding proteins, family 3 LLI13_RS28760 PF00005 ABC transporter LLI13_RS28765 PF00072 Response regulator receiver domain LLI13_RS28765 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS28770 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS28770 PF00672 HAMP domain LLI13_RS28770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS28775 PF16868 NMT1-like family LLI13_RS28790 PF04055 Radical SAM superfamily LLI13_RS28790 PF00919 Uncharacterized protein family UPF0004 LLI13_RS28820 PF01678 Diaminopimelate epimerase LLI13_RS28825 PF13291 ACT domain LLI13_RS28825 PF04607 Region found in RelA / SpoT proteins LLI13_RS28825 PF02824 TGS domain LLI13_RS28830 PF13167 GTP-binding GTPase N-terminal LLI13_RS28830 PF16360 GTP-binding GTPase Middle Region LLI13_RS28830 PF01926 50S ribosome-binding GTPase LLI13_RS28845 PF04183 IucA / IucC family LLI13_RS28845 PF06276 Ferric iron reductase FhuF-like transporter LLI13_RS28855 PF13307 Helicase C-terminal domain LLI13_RS28860 PF00717 Peptidase S24-like LLI13_RS28860 PF01726 LexA DNA binding domain LLI13_RS28865 PF03477 ATP cone domain LLI13_RS28870 PF08471 Class II vitamin B12-dependent ribonucleotide reductase LLI13_RS28870 PF02867 Ribonucleotide reductase, barrel domain LLI13_RS28895 PF07690 Major Facilitator Superfamily LLI13_RS28900 PF16859 Tetracyclin repressor-like, C-terminal domain LLI13_RS28900 PF00440 Bacterial regulatory proteins, tetR family LLI13_RS28905 PF01351 Ribonuclease HII LLI13_RS28920 PF00271 Helicase conserved C-terminal domain LLI13_RS28920 PF00570 HRDC domain LLI13_RS28920 PF16124 RecQ zinc-binding LLI13_RS28920 PF09382 RQC domain LLI13_RS28920 PF00270 DEAD/DEAH box helicase LLI13_RS28930 PF03099 Biotin/lipoate A/B protein ligase family LLI13_RS28930 PF00293 NUDIX domain LLI13_RS28935 PF00005 ABC transporter LLI13_RS28940 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS28940 PF07729 FCD domain LLI13_RS28945 PF04539 Sigma-70 region 3 LLI13_RS28945 PF04545 Sigma-70, region 4 LLI13_RS28945 PF04542 Sigma-70 region 2 LLI13_RS28945 PF00140 Sigma-70 factor, region 1.2 LLI13_RS28950 PF00089 Trypsin LLI13_RS28960 PF00204 DNA gyrase B LLI13_RS28960 PF00986 DNA gyrase B subunit, carboxyl terminus LLI13_RS28960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS28960 PF01751 Toprim domain LLI13_RS28970 PF00474 Sodium:solute symporter family LLI13_RS28975 PF00072 Response regulator receiver domain LLI13_RS28975 PF12431 Transcriptional regulator LLI13_RS28980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS28980 PF00989 PAS fold LLI13_RS28980 PF17203 Single cache domain 3 LLI13_RS28980 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LLI13_RS29000 PF02492 CobW/HypB/UreG, nucleotide-binding domain LLI13_RS29000 PF07683 Cobalamin synthesis protein cobW C-terminal domain LLI13_RS29005 PF03989 DNA gyrase C-terminal domain, beta-propeller LLI13_RS29005 PF00521 DNA gyrase/topoisomerase IV, subunit A LLI13_RS29010 PF00675 Insulinase (Peptidase family M16) LLI13_RS29010 PF05193 Peptidase M16 inactive domain LLI13_RS29025 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS29025 PF07729 FCD domain LLI13_RS29030 PF00381 PTS HPr component phosphorylation site LLI13_RS29035 PF13380 CoA binding domain LLI13_RS29035 PF13607 Succinyl-CoA ligase like flavodoxin domain LLI13_RS29035 PF00583 Acetyltransferase (GNAT) family LLI13_RS29050 PF00265 Thymidine kinase LLI13_RS29070 PF09967 VWA-like domain (DUF2201) LLI13_RS29070 PF13203 Putative metallopeptidase domain LLI13_RS29085 PF01850 PIN domain LLI13_RS29105 PF00581 Rhodanese-like domain LLI13_RS29110 PF11268 Protein of unknown function (DUF3071) LLI13_RS29115 PF01565 FAD binding domain LLI13_RS29115 PF04030 D-arabinono-1,4-lactone oxidase LLI13_RS29125 PF00762 Ferrochelatase LLI13_RS29130 PF00459 Inositol monophosphatase family LLI13_RS29140 PF00072 Response regulator receiver domain LLI13_RS29140 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS29145 PF00672 HAMP domain LLI13_RS29145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS29145 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS29170 PF00692 dUTPase LLI13_RS29180 PF02687 FtsX-like permease family LLI13_RS29180 PF00005 ABC transporter LLI13_RS29180 PF12704 MacB-like periplasmic core domain LLI13_RS29185 PF13493 Domain of unknown function (DUF4118) LLI13_RS29185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS29185 PF00512 His Kinase A (phospho-acceptor) domain LLI13_RS29185 PF02702 Osmosensitive K+ channel His kinase sensor domain LLI13_RS29185 PF00582 Universal stress protein family LLI13_RS29190 PF00072 Response regulator receiver domain LLI13_RS29190 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS29205 PF02080 TrkA-C domain LLI13_RS29205 PF02254 TrkA-N domain LLI13_RS29210 PF02080 TrkA-C domain LLI13_RS29210 PF02254 TrkA-N domain LLI13_RS29215 PF00294 pfkB family carbohydrate kinase LLI13_RS29220 PF13520 Amino acid permease LLI13_RS29225 PF01938 TRAM domain LLI13_RS29225 PF05958 tRNA (Uracil-5-)-methyltransferase LLI13_RS29250 PF12823 Domain of unknown function (DUF3817) LLI13_RS29250 PF03176 MMPL family LLI13_RS29280 PF01752 Collagenase LLI13_RS29280 PF08453 Peptidase family M9 N-terminal LLI13_RS29285 PF02983 Alpha-lytic protease prodomain LLI13_RS29290 PF03466 LysR substrate binding domain LLI13_RS29290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS29315 PF00557 Metallopeptidase family M24 LLI13_RS29320 PF01526 Tn3 transposase DDE domain LLI13_RS29325 PF00561 alpha/beta hydrolase fold LLI13_RS29335 PF01740 STAS domain LLI13_RS29335 PF00916 Sulfate permease family LLI13_RS29340 PF13411 MerR HTH family regulatory protein LLI13_RS29350 PF01022 Bacterial regulatory protein, arsR family LLI13_RS29360 PF01758 Sodium Bile acid symporter family LLI13_RS29365 PF01022 Bacterial regulatory protein, arsR family LLI13_RS29370 PF01451 Low molecular weight phosphotyrosine protein phosphatase LLI13_RS29380 PF00561 alpha/beta hydrolase fold LLI13_RS29385 PF00561 alpha/beta hydrolase fold LLI13_RS29410 PF00652 Ricin-type beta-trefoil lectin domain LLI13_RS29410 PF03664 Glycosyl hydrolase family 62 LLI13_RS29415 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS29415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS29415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS29420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LLI13_RS29420 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LLI13_RS29420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LLI13_RS29425 PF01144 Coenzyme A transferase LLI13_RS29430 PF01144 Coenzyme A transferase LLI13_RS29435 PF03466 LysR substrate binding domain LLI13_RS29435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLI13_RS29440 PF02803 Thiolase, C-terminal domain LLI13_RS29440 PF00108 Thiolase, N-terminal domain LLI13_RS29445 PF00083 Sugar (and other) transporter LLI13_RS29445 PF07690 Major Facilitator Superfamily LLI13_RS29450 PF01575 MaoC like domain LLI13_RS29460 PF00202 Aminotransferase class-III LLI13_RS29465 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LLI13_RS29475 PF00535 Glycosyl transferase family 2 LLI13_RS29485 PF16254 Domain of unknown function (DUF4910) LLI13_RS29485 PF16221 winged helix-turn-helix LLI13_RS29485 PF09940 Domain of unknown function (DUF2172) LLI13_RS29490 PF16363 GDP-mannose 4,6 dehydratase LLI13_RS29500 PF00483 Nucleotidyl transferase LLI13_RS29505 PF08421 Putative zinc binding domain LLI13_RS29505 PF08484 C-methyltransferase C-terminal domain LLI13_RS29510 PF13439 Glycosyltransferase Family 4 LLI13_RS29510 PF00534 Glycosyl transferases group 1 LLI13_RS29530 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS29530 PF00107 Zinc-binding dehydrogenase LLI13_RS29535 PF13537 Glutamine amidotransferase domain LLI13_RS29535 PF00733 Asparagine synthase LLI13_RS29555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LLI13_RS29555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LLI13_RS29555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LLI13_RS29560 PF02397 Bacterial sugar transferase LLI13_RS29570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLI13_RS29570 PF00005 ABC transporter LLI13_RS29575 PF12911 N-terminal TM domain of oligopeptide transport permease C LLI13_RS29575 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS29580 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS29585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLI13_RS29595 PF07690 Major Facilitator Superfamily LLI13_RS29600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LLI13_RS29600 PF13378 Enolase C-terminal domain-like LLI13_RS29605 PF00291 Pyridoxal-phosphate dependent enzyme LLI13_RS29615 PF02142 MGS-like domain LLI13_RS29615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LLI13_RS29615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLI13_RS29625 PF07729 FCD domain LLI13_RS29625 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS29630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLI13_RS29635 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LLI13_RS29635 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LLI13_RS29635 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LLI13_RS29640 PF01507 Phosphoadenosine phosphosulfate reductase family LLI13_RS29645 PF01507 Phosphoadenosine phosphosulfate reductase family LLI13_RS29650 PF00009 Elongation factor Tu GTP binding domain LLI13_RS29660 PF00005 ABC transporter LLI13_RS29670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LLI13_RS29670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LLI13_RS29685 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS29690 PF07730 Histidine kinase LLI13_RS29690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLI13_RS29695 PF07690 Major Facilitator Superfamily LLI13_RS29710 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLI13_RS29710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LLI13_RS29720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LLI13_RS29720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LLI13_RS29720 PF02770 Acyl-CoA dehydrogenase, middle domain LLI13_RS29730 PF00698 Acyl transferase domain LLI13_RS29730 PF03060 Nitronate monooxygenase LLI13_RS29735 PF00698 Acyl transferase domain LLI13_RS29735 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS29735 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS29735 PF08659 KR domain LLI13_RS29735 PF00550 Phosphopantetheine attachment site LLI13_RS29735 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS29735 PF14765 Polyketide synthase dehydratase LLI13_RS29740 PF08659 KR domain LLI13_RS29740 PF02801 Beta-ketoacyl synthase, C-terminal domain LLI13_RS29740 PF14765 Polyketide synthase dehydratase LLI13_RS29740 PF00109 Beta-ketoacyl synthase, N-terminal domain LLI13_RS29740 PF00698 Acyl transferase domain LLI13_RS29740 PF08240 Alcohol dehydrogenase GroES-like domain LLI13_RS29740 PF00550 Phosphopantetheine attachment site LLI13_RS29740 PF16197 Ketoacyl-synthetase C-terminal extension LLI13_RS29755 PF00196 Bacterial regulatory proteins, luxR family LLI13_RS29755 PF13426 PAS domain LLI13_RS29760 PF01474 Class-II DAHP synthetase family LLI13_RS29765 PF00425 chorismate binding enzyme LLI13_RS29765 PF00117 Glutamine amidotransferase class-I LLI13_RS29770 PF00857 Isochorismatase family LLI13_RS29775 PF00106 short chain dehydrogenase LLI13_RS29780 PF01979 Amidohydrolase family LLI13_RS29790 PF00501 AMP-binding enzyme LLI13_RS29790 PF13193 AMP-binding enzyme C-terminal domain LLI13_RS29810 PF04954 Siderophore-interacting protein LLI13_RS29810 PF08021 Siderophore-interacting FAD-binding domain LLI13_RS29810 PF00005 ABC transporter LLI13_RS29810 PF00664 ABC transporter transmembrane region LLI13_RS29815 PF00005 ABC transporter LLI13_RS29820 PF01361 Tautomerase enzyme LLI13_RS29825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LLI13_RS29845 PF01613 Flavin reductase like domain LLI13_RS29855 PF03704 Bacterial transcriptional activator domain LLI13_RS29860 PF00486 Transcriptional regulatory protein, C terminal LLI13_RS29860 PF00931 NB-ARC domain LLI13_RS29860 PF03704 Bacterial transcriptional activator domain LLI13_RS29865 PF00455 DeoR C terminal sensor domain LLI13_RS29865 PF08220 DeoR-like helix-turn-helix domain LLI13_RS29870 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LLI13_RS29880 PF00248 Aldo/keto reductase family LLI13_RS29885 PF03328 HpcH/HpaI aldolase/citrate lyase family LLI13_RS29890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLI13_RS29890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LLI13_RS29890 PF01842 ACT domain LLI13_RS29895 PF01566 Natural resistance-associated macrophage protein LLI13_RS29900 PF07690 Major Facilitator Superfamily LLI13_RS29925 PF00392 Bacterial regulatory proteins, gntR family LLI13_RS29925 PF07702 UTRA domain LLI13_RS29930 PF01547 Bacterial extracellular solute-binding protein LLI13_RS29935 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS29940 PF00528 Binding-protein-dependent transport system inner membrane component LLI13_RS29945 PF00933 Glycosyl hydrolase family 3 N terminal domain LLI13_RS29945 PF01915 Glycosyl hydrolase family 3 C-terminal domain LLI13_RS29955 PF04472 Cell division protein SepF LLI13_RS29985 PF00149 Calcineurin-like phosphoesterase LLI13_RS29995 PF05496 Holliday junction DNA helicase RuvB P-loop domain LLI13_RS29995 PF05491 RuvB C-terminal winged helix domain LLI13_RS29995 PF17864 RuvB AAA lid domain LLI13_RS30005 PF00999 Sodium/hydrogen exchanger family LLI13_RS30020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LLI13_RS30020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LLI13_RS30030 PF00378 Enoyl-CoA hydratase/isomerase LLI13_RS30140 PF00128 Alpha amylase, catalytic domain LLI13_RS30140 PF16657 Maltogenic Amylase, C-terminal domain LLI13_RS30175 PF00501 AMP-binding enzyme LLI13_RS30175 PF14535 AMP-binding enzyme C-terminal domain