locus-tag class description LL041_RS00090 PF13340 Putative transposase of IS4/5 family (DUF4096) LL041_RS00135 PF03364 Polyketide cyclase / dehydrase and lipid transport LL041_RS00180 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LL041_RS00180 PF00175 Oxidoreductase NAD-binding domain LL041_RS00230 PF01925 Sulfite exporter TauE/SafE LL041_RS00240 PF07690 Major Facilitator Superfamily LL041_RS00250 PF00550 Phosphopantetheine attachment site LL041_RS00250 PF08659 KR domain LL041_RS00250 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS00250 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00250 PF00698 Acyl transferase domain LL041_RS00250 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS00255 PF00106 short chain dehydrogenase LL041_RS00260 PF00698 Acyl transferase domain LL041_RS00265 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS00265 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00270 PF00550 Phosphopantetheine attachment site LL041_RS00275 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS00280 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS00285 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LL041_RS00285 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LL041_RS00290 PF00698 Acyl transferase domain LL041_RS00295 PF00698 Acyl transferase domain LL041_RS00295 PF03060 Nitronate monooxygenase LL041_RS00300 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS00300 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00300 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS00300 PF08659 KR domain LL041_RS00300 PF00550 Phosphopantetheine attachment site LL041_RS00300 PF14765 Polyketide synthase dehydratase LL041_RS00305 PF08659 KR domain LL041_RS00305 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS00305 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00305 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS00305 PF14765 Polyketide synthase dehydratase LL041_RS00305 PF00550 Phosphopantetheine attachment site LL041_RS00320 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00320 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS00320 PF00550 Phosphopantetheine attachment site LL041_RS00320 PF14765 Polyketide synthase dehydratase LL041_RS00320 PF08659 KR domain LL041_RS00320 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS00325 PF08659 KR domain LL041_RS00325 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS00325 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00325 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS00325 PF00550 Phosphopantetheine attachment site LL041_RS00325 PF14765 Polyketide synthase dehydratase LL041_RS00330 PF08659 KR domain LL041_RS00330 PF14765 Polyketide synthase dehydratase LL041_RS00330 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00330 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS00330 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS00330 PF08242 Methyltransferase domain LL041_RS00330 PF00550 Phosphopantetheine attachment site LL041_RS00340 PF00067 Cytochrome P450 LL041_RS00345 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LL041_RS00345 PF01648 4'-phosphopantetheinyl transferase superfamily LL041_RS00350 PF03781 Sulfatase-modifying factor enzyme 1 LL041_RS00390 PF00069 Protein kinase domain LL041_RS00390 PF13360 PQQ-like domain LL041_RS00410 PF00248 Aldo/keto reductase family LL041_RS00415 PF00704 Glycosyl hydrolases family 18 LL041_RS00415 PF00041 Fibronectin type III domain LL041_RS00415 PF00553 Cellulose binding domain LL041_RS00420 PF00356 Bacterial regulatory proteins, lacI family LL041_RS00430 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS00440 PF00232 Glycosyl hydrolase family 1 LL041_RS00455 PF00011 Hsp20/alpha crystallin family LL041_RS00465 PF13302 Acetyltransferase (GNAT) domain LL041_RS00475 PF03848 Tellurite resistance protein TehB LL041_RS00535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL041_RS00555 PF13302 Acetyltransferase (GNAT) domain LL041_RS00575 PF00144 Beta-lactamase LL041_RS00590 PF00248 Aldo/keto reductase family LL041_RS00615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL041_RS00615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL041_RS00620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LL041_RS00620 PF13378 Enolase C-terminal domain-like LL041_RS00625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL041_RS00625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL041_RS00630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL041_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS00640 PF12911 N-terminal TM domain of oligopeptide transport permease C LL041_RS00640 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS00645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS00645 PF00005 ABC transporter LL041_RS00650 PF00005 ABC transporter LL041_RS00650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS00675 PF01145 SPFH domain / Band 7 family LL041_RS00715 PF00294 pfkB family carbohydrate kinase LL041_RS00720 PF02653 Branched-chain amino acid transport system / permease component LL041_RS00730 PF00005 ABC transporter LL041_RS00735 PF05025 RbsD / FucU transport protein family LL041_RS00740 PF01791 DeoC/LacD family aldolase LL041_RS00745 PF00392 Bacterial regulatory proteins, gntR family LL041_RS00745 PF07702 UTRA domain LL041_RS00755 PF01638 HxlR-like helix-turn-helix LL041_RS00775 PF01381 Helix-turn-helix LL041_RS00780 PF00561 alpha/beta hydrolase fold LL041_RS00790 PF09924 Uncharacterised conserved protein (DUF2156) LL041_RS00790 PF00152 tRNA synthetases class II (D, K and N) LL041_RS00790 PF16995 Transmembrane region of lysyl-tRNA synthetase LL041_RS00790 PF01336 OB-fold nucleic acid binding domain LL041_RS00795 PF13520 Amino acid permease LL041_RS00810 PF13419 Haloacid dehalogenase-like hydrolase LL041_RS00815 PF00440 Bacterial regulatory proteins, tetR family LL041_RS00820 PF00111 2Fe-2S iron-sulfur cluster binding domain LL041_RS00820 PF00970 Oxidoreductase FAD-binding domain LL041_RS00820 PF00175 Oxidoreductase NAD-binding domain LL041_RS00830 PF00392 Bacterial regulatory proteins, gntR family LL041_RS00830 PF07729 FCD domain LL041_RS00835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS00835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS00840 PF02803 Thiolase, C-terminal domain LL041_RS00840 PF00108 Thiolase, N-terminal domain LL041_RS00850 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS00850 PF00698 Acyl transferase domain LL041_RS00850 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS00850 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00850 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS00850 PF08659 KR domain LL041_RS00850 PF00550 Phosphopantetheine attachment site LL041_RS00850 PF14765 Polyketide synthase dehydratase LL041_RS00855 PF02515 CoA-transferase family III LL041_RS00860 PF00501 AMP-binding enzyme LL041_RS00860 PF13193 AMP-binding enzyme C-terminal domain LL041_RS00865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS00865 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS00865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS00870 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS00875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS00875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS00880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS00880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS00890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS00890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS00890 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS00895 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS00900 PF02515 CoA-transferase family III LL041_RS00905 PF00083 Sugar (and other) transporter LL041_RS00905 PF07690 Major Facilitator Superfamily LL041_RS00915 PF00069 Protein kinase domain LL041_RS00915 PF03793 PASTA domain LL041_RS00925 PF09382 RQC domain LL041_RS00925 PF00270 DEAD/DEAH box helicase LL041_RS00925 PF00570 HRDC domain LL041_RS00925 PF00271 Helicase conserved C-terminal domain LL041_RS00925 PF16124 RecQ zinc-binding LL041_RS00930 PF02983 Alpha-lytic protease prodomain LL041_RS00930 PF00089 Trypsin LL041_RS00950 PF07690 Major Facilitator Superfamily LL041_RS00960 PF01872 RibD C-terminal domain LL041_RS00990 PF14765 Polyketide synthase dehydratase LL041_RS00990 PF00550 Phosphopantetheine attachment site LL041_RS00990 PF00698 Acyl transferase domain LL041_RS00990 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS00990 PF00107 Zinc-binding dehydrogenase LL041_RS00990 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS00990 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS00990 PF08659 KR domain LL041_RS00990 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS01010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS01010 PF03466 LysR substrate binding domain LL041_RS01015 PF07690 Major Facilitator Superfamily LL041_RS01025 PF06965 Na+/H+ antiporter 1 LL041_RS01025 PF13462 Thioredoxin LL041_RS01050 PF07690 Major Facilitator Superfamily LL041_RS01055 PF13472 GDSL-like Lipase/Acylhydrolase family LL041_RS01085 PF00583 Acetyltransferase (GNAT) family LL041_RS01090 PF01176 Translation initiation factor 1A / IF-1 LL041_RS01095 PF12706 Beta-lactamase superfamily domain LL041_RS01105 PF03466 LysR substrate binding domain LL041_RS01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS01115 PF02540 NAD synthase LL041_RS01130 PF13649 Methyltransferase domain LL041_RS01135 PF04476 4-HFC-P synthase LL041_RS01140 PF00171 Aldehyde dehydrogenase family LL041_RS01145 PF00107 Zinc-binding dehydrogenase LL041_RS01145 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS01150 PF04072 Leucine carboxyl methyltransferase LL041_RS01155 PF00501 AMP-binding enzyme LL041_RS01160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS01160 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS01160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS01165 PF00108 Thiolase, N-terminal domain LL041_RS01165 PF02803 Thiolase, C-terminal domain LL041_RS01170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS01170 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS01170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS01175 PF00296 Luciferase-like monooxygenase LL041_RS01180 PF02515 CoA-transferase family III LL041_RS01185 PF00440 Bacterial regulatory proteins, tetR family LL041_RS01185 PF02909 Tetracyclin repressor-like, C-terminal domain LL041_RS01195 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS01195 PF00107 Zinc-binding dehydrogenase LL041_RS01200 PF00440 Bacterial regulatory proteins, tetR family LL041_RS01205 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LL041_RS01215 PF13185 GAF domain LL041_RS01215 PF13492 GAF domain LL041_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS01215 PF07730 Histidine kinase LL041_RS01220 PF00083 Sugar (and other) transporter LL041_RS01235 PF10503 Esterase PHB depolymerase LL041_RS01240 PF01144 Coenzyme A transferase LL041_RS01245 PF01144 Coenzyme A transferase LL041_RS01250 PF13280 WYL domain LL041_RS01250 PF08279 HTH domain LL041_RS01265 PF04029 2-phosphosulpholactate phosphatase LL041_RS01290 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS01290 PF00107 Zinc-binding dehydrogenase LL041_RS01300 PF00376 MerR family regulatory protein LL041_RS01300 PF09278 MerR, DNA binding LL041_RS01340 PF01297 Zinc-uptake complex component A periplasmic LL041_RS01350 PF00950 ABC 3 transport family LL041_RS01355 PF00005 ABC transporter LL041_RS01365 PF08281 Sigma-70, region 4 LL041_RS01365 PF04542 Sigma-70 region 2 LL041_RS01365 PF12680 SnoaL-like domain LL041_RS01370 PF07690 Major Facilitator Superfamily LL041_RS01375 PF13185 GAF domain LL041_RS01375 PF13492 GAF domain LL041_RS01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS01375 PF07730 Histidine kinase LL041_RS01380 PF00005 ABC transporter LL041_RS01385 PF01032 FecCD transport family LL041_RS01405 PF00171 Aldehyde dehydrogenase family LL041_RS01410 PF00266 Aminotransferase class-V LL041_RS01420 PF03301 Tryptophan 2,3-dioxygenase LL041_RS01430 PF00970 Oxidoreductase FAD-binding domain LL041_RS01430 PF00111 2Fe-2S iron-sulfur cluster binding domain LL041_RS01430 PF00175 Oxidoreductase NAD-binding domain LL041_RS01435 PF01883 Iron-sulfur cluster assembly protein LL041_RS01440 PF05138 Phenylacetic acid catabolic protein LL041_RS01450 PF05138 Phenylacetic acid catabolic protein LL041_RS01455 PF00550 Phosphopantetheine attachment site LL041_RS01460 PF13193 AMP-binding enzyme C-terminal domain LL041_RS01460 PF00501 AMP-binding enzyme LL041_RS01475 PF00107 Zinc-binding dehydrogenase LL041_RS01475 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS01480 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS01480 PF00668 Condensation domain LL041_RS01480 PF00698 Acyl transferase domain LL041_RS01480 PF00550 Phosphopantetheine attachment site LL041_RS01480 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS01480 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS01485 PF00550 Phosphopantetheine attachment site LL041_RS01485 PF13193 AMP-binding enzyme C-terminal domain LL041_RS01485 PF00501 AMP-binding enzyme LL041_RS01485 PF00668 Condensation domain LL041_RS01485 PF00975 Thioesterase domain LL041_RS01490 PF16911 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus LL041_RS01495 PF04542 Sigma-70 region 2 LL041_RS01495 PF08281 Sigma-70, region 4 LL041_RS01525 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS01525 PF13823 Alcohol dehydrogenase GroES-associated LL041_RS01525 PF00107 Zinc-binding dehydrogenase LL041_RS01535 PF00248 Aldo/keto reductase family LL041_RS01560 PF01638 HxlR-like helix-turn-helix LL041_RS01565 PF12697 Alpha/beta hydrolase family LL041_RS01575 PF00652 Ricin-type beta-trefoil lectin domain LL041_RS01575 PF00331 Glycosyl hydrolase family 10 LL041_RS01580 PF00457 Glycosyl hydrolases family 11 LL041_RS01580 PF03422 Carbohydrate binding module (family 6) LL041_RS01595 PF04616 Glycosyl hydrolases family 43 LL041_RS01595 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain LL041_RS01600 PF01047 MarR family LL041_RS01605 PF03176 MMPL family LL041_RS01610 PF02146 Sir2 family LL041_RS01620 PF03551 Transcriptional regulator PadR-like family LL041_RS01620 PF13847 Methyltransferase domain LL041_RS01625 PF07681 DoxX LL041_RS01660 PF08946 Osmosensory transporter coiled coil LL041_RS01660 PF00083 Sugar (and other) transporter LL041_RS01675 PF00037 4Fe-4S binding domain LL041_RS01675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS01685 PF01513 ATP-NAD kinase LL041_RS01690 PF00471 Ribosomal protein L33 LL041_RS01715 PF07728 AAA domain (dynein-related subfamily) LL041_RS01795 PF00248 Aldo/keto reductase family LL041_RS01810 PF00561 alpha/beta hydrolase fold LL041_RS01820 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS01825 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS01840 PF00356 Bacterial regulatory proteins, lacI family LL041_RS01845 PF00356 Bacterial regulatory proteins, lacI family LL041_RS01850 PF13407 Periplasmic binding protein domain LL041_RS01855 PF00005 ABC transporter LL041_RS01860 PF02653 Branched-chain amino acid transport system / permease component LL041_RS01865 PF02653 Branched-chain amino acid transport system / permease component LL041_RS01880 PF04616 Glycosyl hydrolases family 43 LL041_RS01895 PF00533 BRCA1 C Terminus (BRCT) domain LL041_RS01895 PF01653 NAD-dependent DNA ligase adenylation domain LL041_RS01895 PF03120 NAD-dependent DNA ligase OB-fold domain LL041_RS01895 PF12826 Helix-hairpin-helix motif LL041_RS01900 PF13460 NAD(P)H-binding LL041_RS01905 PF05139 Erythromycin esterase LL041_RS01905 PF00156 Phosphoribosyl transferase domain LL041_RS01915 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LL041_RS01915 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LL041_RS01920 PF00753 Metallo-beta-lactamase superfamily LL041_RS01925 PF07859 alpha/beta hydrolase fold LL041_RS01930 PF01494 FAD binding domain LL041_RS01945 PF00067 Cytochrome P450 LL041_RS01955 PF14759 Reductase C-terminal LL041_RS01955 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS01960 PF03466 LysR substrate binding domain LL041_RS01965 PF04542 Sigma-70 region 2 LL041_RS01965 PF08281 Sigma-70, region 4 LL041_RS01970 PF03795 YCII-related domain LL041_RS01975 PF00440 Bacterial regulatory proteins, tetR family LL041_RS01980 PF01144 Coenzyme A transferase LL041_RS01985 PF01144 Coenzyme A transferase LL041_RS01990 PF00108 Thiolase, N-terminal domain LL041_RS01990 PF02803 Thiolase, C-terminal domain LL041_RS01995 PF01494 FAD binding domain LL041_RS02005 PF01557 Fumarylacetoacetate (FAA) hydrolase family LL041_RS02010 PF07883 Cupin domain LL041_RS02015 PF09339 IclR helix-turn-helix domain LL041_RS02015 PF01614 Bacterial transcriptional regulator LL041_RS02025 PF16990 Carbohydrate binding module (family 35) LL041_RS02025 PF03422 Carbohydrate binding module (family 6) LL041_RS02025 PF13199 Glycosyl hydrolase family 66 LL041_RS02030 PF08241 Methyltransferase domain LL041_RS02040 PF02785 Biotin carboxylase C-terminal domain LL041_RS02040 PF00289 Biotin carboxylase, N-terminal domain LL041_RS02040 PF00364 Biotin-requiring enzyme LL041_RS02040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL041_RS02040 PF00682 HMGL-like LL041_RS02040 PF02436 Conserved carboxylase domain LL041_RS02045 PF00082 Subtilase family LL041_RS02045 PF05922 Peptidase inhibitor I9 LL041_RS02055 PF07681 DoxX LL041_RS02070 PF00501 AMP-binding enzyme LL041_RS02080 PF00266 Aminotransferase class-V LL041_RS02085 PF01594 AI-2E family transporter LL041_RS02095 PF16483 Beta-1,3-glucanase LL041_RS02095 PF00652 Ricin-type beta-trefoil lectin domain LL041_RS02100 PF00232 Glycosyl hydrolase family 1 LL041_RS02105 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS02110 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS02115 PF13416 Bacterial extracellular solute-binding protein LL041_RS02120 PF13802 Galactose mutarotase-like LL041_RS02120 PF01055 Glycosyl hydrolases family 31 LL041_RS02125 PF03976 Polyphosphate kinase 2 (PPK2) LL041_RS02130 PF00106 short chain dehydrogenase LL041_RS02140 PF00356 Bacterial regulatory proteins, lacI family LL041_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS02150 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS02160 PF08533 Beta-galactosidase C-terminal domain LL041_RS02160 PF08532 Beta-galactosidase trimerisation domain LL041_RS02160 PF02449 Beta-galactosidase LL041_RS02170 PF12464 Maltose acetyltransferase LL041_RS02170 PF00132 Bacterial transferase hexapeptide (six repeats) LL041_RS02180 PF07728 AAA domain (dynein-related subfamily) LL041_RS02180 PF08406 CbbQ/NirQ/NorQ C-terminal LL041_RS02195 PF01032 FecCD transport family LL041_RS02200 PF01497 Periplasmic binding protein LL041_RS02205 PF00005 ABC transporter LL041_RS02225 PF01625 Peptide methionine sulfoxide reductase LL041_RS02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS02235 PF00989 PAS fold LL041_RS02235 PF17203 Single cache domain 3 LL041_RS02235 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LL041_RS02245 PF00183 Hsp90 protein LL041_RS02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS02260 PF02983 Alpha-lytic protease prodomain LL041_RS02265 PF02031 Streptomyces extracellular neutral proteinase (M7) family LL041_RS02270 PF00248 Aldo/keto reductase family LL041_RS02290 PF02653 Branched-chain amino acid transport system / permease component LL041_RS02295 PF12399 Branched-chain amino acid ATP-binding cassette transporter LL041_RS02295 PF00005 ABC transporter LL041_RS02300 PF00005 ABC transporter LL041_RS02305 PF07905 Purine catabolism regulatory protein-like family LL041_RS02305 PF13556 PucR C-terminal helix-turn-helix domain LL041_RS02305 PF17853 GGDEF-like domain LL041_RS02315 PF12695 Alpha/beta hydrolase family LL041_RS02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS02360 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LL041_RS02360 PF17203 Single cache domain 3 LL041_RS02360 PF00989 PAS fold LL041_RS02365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS02375 PF03633 Glycosyl hydrolase family 65, C-terminal domain LL041_RS02375 PF03632 Glycosyl hydrolase family 65 central catalytic domain LL041_RS02375 PF02358 Trehalose-phosphatase LL041_RS02375 PF03636 Glycosyl hydrolase family 65, N-terminal domain LL041_RS02380 PF13492 GAF domain LL041_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS02380 PF13185 GAF domain LL041_RS02380 PF07730 Histidine kinase LL041_RS02385 PF00175 Oxidoreductase NAD-binding domain LL041_RS02385 PF00042 Globin LL041_RS02385 PF00970 Oxidoreductase FAD-binding domain LL041_RS02445 PF12833 Helix-turn-helix domain LL041_RS02445 PF01965 DJ-1/PfpI family LL041_RS02455 PF00005 ABC transporter LL041_RS02455 PF00664 ABC transporter transmembrane region LL041_RS02460 PF00248 Aldo/keto reductase family LL041_RS02465 PF06983 3-demethylubiquinone-9 3-methyltransferase LL041_RS02470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS02470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS02495 PF03633 Glycosyl hydrolase family 65, C-terminal domain LL041_RS02495 PF03632 Glycosyl hydrolase family 65 central catalytic domain LL041_RS02495 PF03636 Glycosyl hydrolase family 65, N-terminal domain LL041_RS02500 PF13419 Haloacid dehalogenase-like hydrolase LL041_RS02545 PF00440 Bacterial regulatory proteins, tetR family LL041_RS02560 PF13649 Methyltransferase domain LL041_RS02565 PF00155 Aminotransferase class I and II LL041_RS02570 PF02983 Alpha-lytic protease prodomain LL041_RS02570 PF00089 Trypsin LL041_RS02600 PF00107 Zinc-binding dehydrogenase LL041_RS02600 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS02605 PF00005 ABC transporter LL041_RS02605 PF00664 ABC transporter transmembrane region LL041_RS02630 PF07732 Multicopper oxidase LL041_RS02630 PF07731 Multicopper oxidase LL041_RS02640 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LL041_RS02640 PF00535 Glycosyl transferase family 2 LL041_RS02650 PF00483 Nucleotidyl transferase LL041_RS02665 PF00089 Trypsin LL041_RS02665 PF02983 Alpha-lytic protease prodomain LL041_RS02680 PF00664 ABC transporter transmembrane region LL041_RS02680 PF03412 Peptidase C39 family LL041_RS02680 PF00005 ABC transporter LL041_RS02685 PF00005 ABC transporter LL041_RS02685 PF00664 ABC transporter transmembrane region LL041_RS02695 PF02541 Ppx/GppA phosphatase family LL041_RS02700 PF01566 Natural resistance-associated macrophage protein LL041_RS02700 PF03358 NADPH-dependent FMN reductase LL041_RS02710 PF05175 Methyltransferase small domain LL041_RS02710 PF17827 PrmC N-terminal domain LL041_RS02725 PF00720 Subtilisin inhibitor-like LL041_RS02735 PF01070 FMN-dependent dehydrogenase LL041_RS02755 PF02927 Cellulase N-terminal ig-like domain LL041_RS02755 PF02018 Carbohydrate binding domain LL041_RS02755 PF00759 Glycosyl hydrolase family 9 LL041_RS02760 PF13581 Histidine kinase-like ATPase domain LL041_RS02760 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS02760 PF13466 STAS domain LL041_RS02760 PF08448 PAS fold LL041_RS02770 PF00248 Aldo/keto reductase family LL041_RS02780 PF04075 F420H(2)-dependent quinone reductase LL041_RS02790 PF13409 Glutathione S-transferase, N-terminal domain LL041_RS02825 PF14716 Helix-hairpin-helix domain LL041_RS02825 PF14791 DNA polymerase beta thumb LL041_RS02825 PF02811 PHP domain LL041_RS02830 PF13419 Haloacid dehalogenase-like hydrolase LL041_RS02840 PF01370 NAD dependent epimerase/dehydratase family LL041_RS02850 PF00480 ROK family LL041_RS02850 PF01047 MarR family LL041_RS02870 PF10282 Lactonase, 7-bladed beta-propeller LL041_RS02880 PF00440 Bacterial regulatory proteins, tetR family LL041_RS02880 PF08362 YcdC-like protein, C-terminal region LL041_RS02885 PF00258 Flavodoxin LL041_RS02885 PF00175 Oxidoreductase NAD-binding domain LL041_RS02885 PF00667 FAD binding domain LL041_RS02885 PF00067 Cytochrome P450 LL041_RS02900 PF00561 alpha/beta hydrolase fold LL041_RS02905 PF00356 Bacterial regulatory proteins, lacI family LL041_RS02910 PF05336 L-rhamnose mutarotase LL041_RS02915 PF13407 Periplasmic binding protein domain LL041_RS02920 PF02653 Branched-chain amino acid transport system / permease component LL041_RS02925 PF02653 Branched-chain amino acid transport system / permease component LL041_RS02930 PF00005 ABC transporter LL041_RS02935 PF01261 Xylose isomerase-like TIM barrel LL041_RS02940 PF00596 Class II Aldolase and Adducin N-terminal domain LL041_RS02945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL041_RS02945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL041_RS02950 PF02754 Cysteine-rich domain LL041_RS02955 PF02589 LUD domain LL041_RS02955 PF11870 Domain of unknown function (DUF3390) LL041_RS02955 PF13183 4Fe-4S dicluster domain LL041_RS02960 PF02589 LUD domain LL041_RS02965 PF12704 MacB-like periplasmic core domain LL041_RS02965 PF00005 ABC transporter LL041_RS02965 PF02687 FtsX-like permease family LL041_RS02975 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS02975 PF10431 C-terminal, D2-small domain, of ClpB protein LL041_RS02975 PF02861 Clp amino terminal domain, pathogenicity island component LL041_RS02975 PF17871 AAA lid domain LL041_RS02975 PF07724 AAA domain (Cdc48 subfamily) LL041_RS03000 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS03010 PF08281 Sigma-70, region 4 LL041_RS03010 PF04542 Sigma-70 region 2 LL041_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS03025 PF07730 Histidine kinase LL041_RS03030 PF00196 Bacterial regulatory proteins, luxR family LL041_RS03030 PF00072 Response regulator receiver domain LL041_RS03045 PF01327 Polypeptide deformylase LL041_RS03050 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS03050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LL041_RS03055 PF00085 Thioredoxin LL041_RS03060 PF00356 Bacterial regulatory proteins, lacI family LL041_RS03070 PF03358 NADPH-dependent FMN reductase LL041_RS03080 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LL041_RS03080 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LL041_RS03085 PF03450 CO dehydrogenase flavoprotein C-terminal domain LL041_RS03085 PF00941 FAD binding domain in molybdopterin dehydrogenase LL041_RS03090 PF00111 2Fe-2S iron-sulfur cluster binding domain LL041_RS03090 PF01799 [2Fe-2S] binding domain LL041_RS03090 PF10518 TAT (twin-arginine translocation) pathway signal sequence LL041_RS03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS03100 PF03466 LysR substrate binding domain LL041_RS03110 PF02515 CoA-transferase family III LL041_RS03115 PF00156 Phosphoribosyl transferase domain LL041_RS03115 PF01738 Dienelactone hydrolase family LL041_RS03120 PF01951 Archease protein family (MTH1598/TM1083) LL041_RS03130 PF01161 Phosphatidylethanolamine-binding protein LL041_RS03135 PF00571 CBS domain LL041_RS03150 PF00857 Isochorismatase family LL041_RS03175 PF04107 Glutamate-cysteine ligase family 2(GCS2) LL041_RS03180 PF03781 Sulfatase-modifying factor enzyme 1 LL041_RS03180 PF12867 DinB superfamily LL041_RS03190 PF10017 Histidine-specific methyltransferase, SAM-dependent LL041_RS03195 PF01547 Bacterial extracellular solute-binding protein LL041_RS03200 PF07311 Dodecin LL041_RS03210 PF11181 Heat induced stress protein YflT LL041_RS03210 PF09557 Domain of unknown function (DUF2382) LL041_RS03215 PF01553 Acyltransferase LL041_RS03225 PF13085 2Fe-2S iron-sulfur cluster binding domain LL041_RS03230 PF00890 FAD binding domain LL041_RS03230 PF02910 Fumarate reductase flavoprotein C-term LL041_RS03240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS03240 PF03466 LysR substrate binding domain LL041_RS03250 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain LL041_RS03250 PF01522 Polysaccharide deacetylase LL041_RS03285 PF00563 EAL domain LL041_RS03285 PF03707 Bacterial signalling protein N terminal repeat LL041_RS03285 PF00990 Diguanylate cyclase, GGDEF domain LL041_RS03300 PF04542 Sigma-70 region 2 LL041_RS03300 PF04545 Sigma-70, region 4 LL041_RS03315 PF06827 Zinc finger found in FPG and IleRS LL041_RS03315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LL041_RS03350 PF00106 short chain dehydrogenase LL041_RS03355 PF06974 Protein of unknown function (DUF1298) LL041_RS03355 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LL041_RS03360 PF00483 Nucleotidyl transferase LL041_RS03365 PF13439 Glycosyltransferase Family 4 LL041_RS03365 PF00534 Glycosyl transferases group 1 LL041_RS03380 PF06737 Transglycosylase-like domain LL041_RS03385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LL041_RS03385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LL041_RS03400 PF02261 Aspartate decarboxylase LL041_RS03405 PF07690 Major Facilitator Superfamily LL041_RS03415 PF00404 Dockerin type I domain LL041_RS03415 PF03422 Carbohydrate binding module (family 6) LL041_RS03415 PF00756 Putative esterase LL041_RS03415 PF00331 Glycosyl hydrolase family 10 LL041_RS03420 PF00652 Ricin-type beta-trefoil lectin domain LL041_RS03420 PF00331 Glycosyl hydrolase family 10 LL041_RS03425 PF03664 Glycosyl hydrolase family 62 LL041_RS03425 PF00652 Ricin-type beta-trefoil lectin domain LL041_RS03445 PF01494 FAD binding domain LL041_RS03450 PF01557 Fumarylacetoacetate (FAA) hydrolase family LL041_RS03455 PF13378 Enolase C-terminal domain-like LL041_RS03455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LL041_RS03465 PF00248 Aldo/keto reductase family LL041_RS03480 PF02913 FAD linked oxidases, C-terminal domain LL041_RS03480 PF01565 FAD binding domain LL041_RS03480 PF13183 4Fe-4S dicluster domain LL041_RS03485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL041_RS03485 PF00205 Thiamine pyrophosphate enzyme, central domain LL041_RS03485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS03490 PF13378 Enolase C-terminal domain-like LL041_RS03490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LL041_RS03500 PF00106 short chain dehydrogenase LL041_RS03505 PF00199 Catalase LL041_RS03505 PF06628 Catalase-related immune-responsive LL041_RS03515 PF00270 DEAD/DEAH box helicase LL041_RS03515 PF00271 Helicase conserved C-terminal domain LL041_RS03520 PF00664 ABC transporter transmembrane region LL041_RS03520 PF00005 ABC transporter LL041_RS03525 PF03458 UPF0126 domain LL041_RS03530 PF07687 Peptidase dimerisation domain LL041_RS03530 PF01546 Peptidase family M20/M25/M40 LL041_RS03535 PF04542 Sigma-70 region 2 LL041_RS03535 PF08281 Sigma-70, region 4 LL041_RS03535 PF12680 SnoaL-like domain LL041_RS03565 PF00128 Alpha amylase, catalytic domain LL041_RS03565 PF02806 Alpha amylase, C-terminal all-beta domain LL041_RS03565 PF00686 Starch binding domain LL041_RS03570 PF00128 Alpha amylase, catalytic domain LL041_RS03570 PF03423 Carbohydrate binding domain (family 25) LL041_RS03570 PF01373 Glycosyl hydrolase family 14 LL041_RS03580 PF14310 Fibronectin type III-like domain LL041_RS03580 PF00933 Glycosyl hydrolase family 3 N terminal domain LL041_RS03580 PF01915 Glycosyl hydrolase family 3 C-terminal domain LL041_RS03585 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS03590 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS03595 PF01547 Bacterial extracellular solute-binding protein LL041_RS03600 PF00356 Bacterial regulatory proteins, lacI family LL041_RS03605 PF00232 Glycosyl hydrolase family 1 LL041_RS03610 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS03615 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS03625 PF00356 Bacterial regulatory proteins, lacI family LL041_RS03640 PF00156 Phosphoribosyl transferase domain LL041_RS03640 PF01738 Dienelactone hydrolase family LL041_RS03645 PF00457 Glycosyl hydrolases family 11 LL041_RS03645 PF01522 Polysaccharide deacetylase LL041_RS03650 PF00457 Glycosyl hydrolases family 11 LL041_RS03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS03675 PF07730 Histidine kinase LL041_RS03680 PF00072 Response regulator receiver domain LL041_RS03680 PF00196 Bacterial regulatory proteins, luxR family LL041_RS03690 PF07549 SecD/SecF GG Motif LL041_RS03690 PF02355 Protein export membrane protein LL041_RS03695 PF00664 ABC transporter transmembrane region LL041_RS03695 PF00005 ABC transporter LL041_RS03705 PF00924 Mechanosensitive ion channel LL041_RS03710 PF03971 Monomeric isocitrate dehydrogenase LL041_RS03730 PF00082 Subtilase family LL041_RS03755 PF07690 Major Facilitator Superfamily LL041_RS03760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL041_RS03765 PF04303 PrpF protein LL041_RS03770 PF03737 Aldolase/RraA LL041_RS03775 PF02585 GlcNAc-PI de-N-acetylase LL041_RS03780 PF07702 UTRA domain LL041_RS03780 PF00392 Bacterial regulatory proteins, gntR family LL041_RS03785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS03785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS03790 PF00356 Bacterial regulatory proteins, lacI family LL041_RS03805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS03805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS03810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS03810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS03815 PF03786 D-mannonate dehydratase (UxuA) LL041_RS03820 PF00005 ABC transporter LL041_RS03825 PF02653 Branched-chain amino acid transport system / permease component LL041_RS03835 PF00294 pfkB family carbohydrate kinase LL041_RS03845 PF04962 KduI/IolB family LL041_RS03850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS03850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL041_RS03850 PF00205 Thiamine pyrophosphate enzyme, central domain LL041_RS03855 PF07702 UTRA domain LL041_RS03855 PF00392 Bacterial regulatory proteins, gntR family LL041_RS03860 PF00248 Aldo/keto reductase family LL041_RS03880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS03885 PF02571 Precorrin-6x reductase CbiJ/CobK LL041_RS03900 PF00108 Thiolase, N-terminal domain LL041_RS03900 PF02803 Thiolase, C-terminal domain LL041_RS03905 PF00210 Ferritin-like domain LL041_RS03930 PF00005 ABC transporter LL041_RS03930 PF17912 MalK OB fold domain LL041_RS03935 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS03940 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS03945 PF01547 Bacterial extracellular solute-binding protein LL041_RS03955 PF00456 Transketolase, thiamine diphosphate binding domain LL041_RS03960 PF02779 Transketolase, pyrimidine binding domain LL041_RS03970 PF00440 Bacterial regulatory proteins, tetR family LL041_RS03970 PF08361 MAATS-type transcriptional repressor, C-terminal region LL041_RS03975 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LL041_RS03980 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LL041_RS03985 PF00034 Cytochrome c LL041_RS03985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LL041_RS03985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LL041_RS03990 PF01799 [2Fe-2S] binding domain LL041_RS03990 PF00111 2Fe-2S iron-sulfur cluster binding domain LL041_RS03995 PF01116 Fructose-bisphosphate aldolase class-II LL041_RS04000 PF00294 pfkB family carbohydrate kinase LL041_RS04005 PF01380 SIS domain LL041_RS04010 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS04015 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS04020 PF01547 Bacterial extracellular solute-binding protein LL041_RS04025 PF08220 DeoR-like helix-turn-helix domain LL041_RS04025 PF00455 DeoR C terminal sensor domain LL041_RS04035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS04040 PF00083 Sugar (and other) transporter LL041_RS04060 PF00535 Glycosyl transferase family 2 LL041_RS04060 PF00795 Carbon-nitrogen hydrolase LL041_RS04070 PF01177 Asp/Glu/Hydantoin racemase LL041_RS04075 PF00535 Glycosyl transferase family 2 LL041_RS04080 PF02342 TerD domain LL041_RS04095 PF17866 AAA lid domain LL041_RS04095 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS04105 PF08220 DeoR-like helix-turn-helix domain LL041_RS04105 PF00455 DeoR C terminal sensor domain LL041_RS04110 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS04135 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LL041_RS04135 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LL041_RS04140 PF00480 ROK family LL041_RS04145 PF13532 2OG-Fe(II) oxygenase superfamily LL041_RS04150 PF05175 Methyltransferase small domain LL041_RS04155 PF00723 Glycosyl hydrolases family 15 LL041_RS04165 PF00403 Heavy-metal-associated domain LL041_RS04170 PF01569 PAP2 superfamily LL041_RS04180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS04180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS04200 PF01970 Tripartite tricarboxylate transporter TctA family LL041_RS04205 PF00553 Cellulose binding domain LL041_RS04205 PF01341 Glycosyl hydrolases family 6 LL041_RS04210 PF00150 Cellulase (glycosyl hydrolase family 5) LL041_RS04210 PF02013 Cellulose or protein binding domain LL041_RS04225 PF07690 Major Facilitator Superfamily LL041_RS04230 PF00196 Bacterial regulatory proteins, luxR family LL041_RS04230 PF00072 Response regulator receiver domain LL041_RS04235 PF07730 Histidine kinase LL041_RS04240 PF04324 BFD-like [2Fe-2S] binding domain LL041_RS04240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS04245 PF01546 Peptidase family M20/M25/M40 LL041_RS04245 PF07687 Peptidase dimerisation domain LL041_RS04260 PF00480 ROK family LL041_RS04265 PF00356 Bacterial regulatory proteins, lacI family LL041_RS04285 PF01012 Electron transfer flavoprotein domain LL041_RS04285 PF00766 Electron transfer flavoprotein FAD-binding domain LL041_RS04290 PF01012 Electron transfer flavoprotein domain LL041_RS04305 PF01553 Acyltransferase LL041_RS04320 PF01212 Beta-eliminating lyase LL041_RS04335 PF03009 Glycerophosphoryl diester phosphodiesterase family LL041_RS04370 PF01569 PAP2 superfamily LL041_RS04375 PF00440 Bacterial regulatory proteins, tetR family LL041_RS04395 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS04400 PF01022 Bacterial regulatory protein, arsR family LL041_RS04405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LL041_RS04410 PF03211 Pectate lyase LL041_RS04420 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS04420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS04420 PF18158 Adaptive response protein AidB N-terminal domain LL041_RS04430 PF03167 Uracil DNA glycosylase superfamily LL041_RS04455 PF13419 Haloacid dehalogenase-like hydrolase LL041_RS04490 PF00999 Sodium/hydrogen exchanger family LL041_RS04490 PF02254 TrkA-N domain LL041_RS04500 PF00582 Universal stress protein family LL041_RS04510 PF00196 Bacterial regulatory proteins, luxR family LL041_RS04515 PF07690 Major Facilitator Superfamily LL041_RS04525 PF01894 Uncharacterised protein family UPF0047 LL041_RS04530 PF00743 Flavin-binding monooxygenase-like LL041_RS04535 PF02618 YceG-like family LL041_RS04540 PF00005 ABC transporter LL041_RS04540 PF00664 ABC transporter transmembrane region LL041_RS04550 PF00664 ABC transporter transmembrane region LL041_RS04550 PF00005 ABC transporter LL041_RS04555 PF00664 ABC transporter transmembrane region LL041_RS04555 PF00005 ABC transporter LL041_RS04565 PF01197 Ribosomal protein L31 LL041_RS04575 PF08148 DSHCT (NUC185) domain LL041_RS04575 PF00271 Helicase conserved C-terminal domain LL041_RS04575 PF00270 DEAD/DEAH box helicase LL041_RS04590 PF03259 Roadblock/LC7 domain LL041_RS04600 PF08241 Methyltransferase domain LL041_RS04630 PF12419 SNF2 Helicase protein LL041_RS04630 PF00271 Helicase conserved C-terminal domain LL041_RS04630 PF00176 SNF2 family N-terminal domain LL041_RS04645 PF01261 Xylose isomerase-like TIM barrel LL041_RS04650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL041_RS04650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL041_RS04655 PF00480 ROK family LL041_RS04675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS04675 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS04675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS04680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS04680 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS04680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS04685 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS04685 PF00107 Zinc-binding dehydrogenase LL041_RS04695 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS04700 PF04679 ATP dependent DNA ligase C terminal region LL041_RS04700 PF01068 ATP dependent DNA ligase domain LL041_RS04710 PF00171 Aldehyde dehydrogenase family LL041_RS04725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS04725 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS04725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS04735 PF01327 Polypeptide deformylase LL041_RS04740 PF08245 Mur ligase middle domain LL041_RS04740 PF02875 Mur ligase family, glutamate ligase domain LL041_RS04745 PF07685 CobB/CobQ-like glutamine amidotransferase domain LL041_RS04750 PF00365 Phosphofructokinase LL041_RS04755 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LL041_RS04755 PF05425 Copper resistance protein D LL041_RS04770 PF07694 5TMR of 5TMR-LYT LL041_RS04770 PF06580 Histidine kinase LL041_RS04775 PF00474 Sodium:solute symporter family LL041_RS04785 PF04397 LytTr DNA-binding domain LL041_RS04785 PF00072 Response regulator receiver domain LL041_RS04790 PF01037 Lrp/AsnC ligand binding domain LL041_RS04800 PF00202 Aminotransferase class-III LL041_RS04805 PF13466 STAS domain LL041_RS04805 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS04805 PF08448 PAS fold LL041_RS04805 PF13581 Histidine kinase-like ATPase domain LL041_RS04810 PF13581 Histidine kinase-like ATPase domain LL041_RS04810 PF08448 PAS fold LL041_RS04810 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS04810 PF13466 STAS domain LL041_RS04815 PF02502 Ribose/Galactose Isomerase LL041_RS04820 PF01553 Acyltransferase LL041_RS04825 PF00561 alpha/beta hydrolase fold LL041_RS04830 PF01774 UreD urease accessory protein LL041_RS04835 PF02492 CobW/HypB/UreG, nucleotide-binding domain LL041_RS04845 PF01979 Amidohydrolase family LL041_RS04845 PF00449 Urease alpha-subunit, N-terminal domain LL041_RS04850 PF00699 Urease beta subunit LL041_RS04855 PF00547 Urease, gamma subunit LL041_RS04865 PF00574 Clp protease LL041_RS04875 PF00877 NlpC/P60 family LL041_RS04895 PF00155 Aminotransferase class I and II LL041_RS04900 PF06968 Biotin and Thiamin Synthesis associated domain LL041_RS04900 PF04055 Radical SAM superfamily LL041_RS04905 PF00202 Aminotransferase class-III LL041_RS04915 PF01209 ubiE/COQ5 methyltransferase family LL041_RS04930 PF00005 ABC transporter LL041_RS04930 PF02687 FtsX-like permease family LL041_RS04930 PF12704 MacB-like periplasmic core domain LL041_RS04940 PF13508 Acetyltransferase (GNAT) domain LL041_RS04940 PF00583 Acetyltransferase (GNAT) family LL041_RS04945 PF01595 Cyclin M transmembrane N-terminal domain LL041_RS04945 PF03471 Transporter associated domain LL041_RS04945 PF00571 CBS domain LL041_RS04950 PF00571 CBS domain LL041_RS04950 PF01595 Cyclin M transmembrane N-terminal domain LL041_RS05075 PF10397 Adenylosuccinate lyase C-terminus LL041_RS05075 PF00206 Lyase LL041_RS05080 PF03167 Uracil DNA glycosylase superfamily LL041_RS05095 PF00005 ABC transporter LL041_RS05100 PF07730 Histidine kinase LL041_RS05105 PF00196 Bacterial regulatory proteins, luxR family LL041_RS05105 PF00072 Response regulator receiver domain LL041_RS05110 PF00480 ROK family LL041_RS05115 PF07702 UTRA domain LL041_RS05115 PF00392 Bacterial regulatory proteins, gntR family LL041_RS05120 PF12680 SnoaL-like domain LL041_RS05120 PF04542 Sigma-70 region 2 LL041_RS05120 PF08281 Sigma-70, region 4 LL041_RS05125 PF12697 Alpha/beta hydrolase family LL041_RS05130 PF00392 Bacterial regulatory proteins, gntR family LL041_RS05145 PF01053 Cys/Met metabolism PLP-dependent enzyme LL041_RS05170 PF13476 AAA domain LL041_RS05175 PF00149 Calcineurin-like phosphoesterase LL041_RS05175 PF12320 Type 5 capsule protein repressor C-terminal domain LL041_RS05180 PF01205 Uncharacterized protein family UPF0029 LL041_RS05180 PF09186 Domain of unknown function (DUF1949) LL041_RS05185 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS05190 PF01406 tRNA synthetases class I (C) catalytic domain LL041_RS05195 PF13380 CoA binding domain LL041_RS05200 PF01022 Bacterial regulatory protein, arsR family LL041_RS05205 PF01545 Cation efflux family LL041_RS05205 PF16916 Dimerisation domain of Zinc Transporter LL041_RS05220 PF00132 Bacterial transferase hexapeptide (six repeats) LL041_RS05225 PF00132 Bacterial transferase hexapeptide (six repeats) LL041_RS05230 PF09335 SNARE associated Golgi protein LL041_RS05255 PF00009 Elongation factor Tu GTP binding domain LL041_RS05255 PF03144 Elongation factor Tu domain 2 LL041_RS05255 PF03143 Elongation factor Tu C-terminal domain LL041_RS05275 PF02673 Bacitracin resistance protein BacA LL041_RS05300 PF00795 Carbon-nitrogen hydrolase LL041_RS05305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS05310 PF04978 Protein of unknown function (DUF664) LL041_RS05325 PF03167 Uracil DNA glycosylase superfamily LL041_RS05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS05385 PF03466 LysR substrate binding domain LL041_RS05390 PF00892 EamA-like transporter family LL041_RS05395 PF00392 Bacterial regulatory proteins, gntR family LL041_RS05395 PF00155 Aminotransferase class I and II LL041_RS05420 PF03551 Transcriptional regulator PadR-like family LL041_RS05425 PF02567 Phenazine biosynthesis-like protein LL041_RS05450 PF01638 HxlR-like helix-turn-helix LL041_RS05470 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS05475 PF03459 TOBE domain LL041_RS05475 PF00005 ABC transporter LL041_RS05480 PF02347 Glycine cleavage system P-protein LL041_RS05490 PF11799 impB/mucB/samB family C-terminal domain LL041_RS05490 PF00817 impB/mucB/samB family LL041_RS05495 PF13411 MerR HTH family regulatory protein LL041_RS05500 PF02577 Bifunctional nuclease LL041_RS05505 PF00376 MerR family regulatory protein LL041_RS05510 PF00498 FHA domain LL041_RS05515 PF05949 Bacterial protein of unknown function (DUF881) LL041_RS05520 PF06947 Protein of unknown function (DUF1290) LL041_RS05525 PF05949 Bacterial protein of unknown function (DUF881) LL041_RS05530 PF00483 Nucleotidyl transferase LL041_RS05535 PF01066 CDP-alcohol phosphatidyltransferase LL041_RS05555 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LL041_RS05560 PF00391 PEP-utilising enzyme, mobile domain LL041_RS05560 PF02896 PEP-utilising enzyme, TIM barrel domain LL041_RS05560 PF05524 PEP-utilising enzyme, N-terminal LL041_RS05570 PF00501 AMP-binding enzyme LL041_RS05570 PF13193 AMP-binding enzyme C-terminal domain LL041_RS05575 PF01055 Glycosyl hydrolases family 31 LL041_RS05575 PF13802 Galactose mutarotase-like LL041_RS05575 PF17137 Domain of unknown function (DUF5110) LL041_RS05575 PF16338 Domain of unknown function (DUF4968) LL041_RS05580 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LL041_RS05580 PF09297 NADH pyrophosphatase zinc ribbon domain LL041_RS05580 PF00293 NUDIX domain LL041_RS05585 PF01427 D-ala-D-ala dipeptidase LL041_RS05595 PF05378 Hydantoinase/oxoprolinase N-terminal region LL041_RS05595 PF01968 Hydantoinase/oxoprolinase LL041_RS05605 PF03259 Roadblock/LC7 domain LL041_RS05620 PF09339 IclR helix-turn-helix domain LL041_RS05620 PF01614 Bacterial transcriptional regulator LL041_RS05645 PF07690 Major Facilitator Superfamily LL041_RS05650 PF07286 Protein of unknown function (DUF1445) LL041_RS05655 PF03746 LamB/YcsF family LL041_RS05660 PF02682 Carboxyltransferase domain, subdomain C and D LL041_RS05665 PF02626 Carboxyltransferase domain, subdomain A and B LL041_RS05675 PF13579 Glycosyl transferase 4-like domain LL041_RS05675 PF00534 Glycosyl transferases group 1 LL041_RS05680 PF13439 Glycosyltransferase Family 4 LL041_RS05680 PF00534 Glycosyl transferases group 1 LL041_RS05690 PF12796 Ankyrin repeats (3 copies) LL041_RS05690 PF00023 Ankyrin repeat LL041_RS05705 PF00392 Bacterial regulatory proteins, gntR family LL041_RS05705 PF00155 Aminotransferase class I and II LL041_RS05720 PF11700 Vacuole effluxer Atg22 like LL041_RS05725 PF13397 RNA polymerase-binding protein LL041_RS05730 PF04186 FxsA cytoplasmic membrane protein LL041_RS05735 PF00535 Glycosyl transferase family 2 LL041_RS05745 PF01037 Lrp/AsnC ligand binding domain LL041_RS05755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS05755 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS05755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS05760 PF00553 Cellulose binding domain LL041_RS05760 PF00041 Fibronectin type III domain LL041_RS05760 PF00704 Glycosyl hydrolases family 18 LL041_RS05785 PF17866 AAA lid domain LL041_RS05785 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS05790 PF00571 CBS domain LL041_RS05790 PF01595 Cyclin M transmembrane N-terminal domain LL041_RS05795 PF03471 Transporter associated domain LL041_RS05795 PF00571 CBS domain LL041_RS05795 PF01595 Cyclin M transmembrane N-terminal domain LL041_RS05805 PF08029 HisG, C-terminal domain LL041_RS05805 PF01634 ATP phosphoribosyltransferase LL041_RS05810 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LL041_RS05815 PF00885 6,7-dimethyl-8-ribityllumazine synthase LL041_RS05820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LL041_RS05820 PF00925 GTP cyclohydrolase II LL041_RS05825 PF04973 Nicotinamide mononucleotide transporter LL041_RS05830 PF00677 Lumazine binding domain LL041_RS05835 PF08338 Domain of unknown function (DUF1731) LL041_RS05835 PF01370 NAD dependent epimerase/dehydratase family LL041_RS05840 PF00480 ROK family LL041_RS05845 PF07690 Major Facilitator Superfamily LL041_RS05855 PF00860 Permease family LL041_RS05860 PF01341 Glycosyl hydrolases family 6 LL041_RS05870 PF01593 Flavin containing amine oxidoreductase LL041_RS05875 PF00795 Carbon-nitrogen hydrolase LL041_RS05890 PF13520 Amino acid permease LL041_RS05895 PF00571 CBS domain LL041_RS05895 PF00478 IMP dehydrogenase / GMP reductase domain LL041_RS05905 PF04198 Putative sugar-binding domain LL041_RS05910 PF00834 Ribulose-phosphate 3 epimerase family LL041_RS05915 PF03176 MMPL family LL041_RS05920 PF01189 16S rRNA methyltransferase RsmB/F LL041_RS05920 PF01029 NusB family LL041_RS05925 PF02911 Formyl transferase, C-terminal domain LL041_RS05925 PF00551 Formyl transferase LL041_RS05935 PF17764 3′ DNA-binding domain (3′BD) LL041_RS05940 PF02773 S-adenosylmethionine synthetase, C-terminal domain LL041_RS05940 PF02772 S-adenosylmethionine synthetase, central domain LL041_RS05940 PF00438 S-adenosylmethionine synthetase, N-terminal domain LL041_RS05945 PF04127 DNA / pantothenate metabolism flavoprotein LL041_RS05945 PF02441 Flavoprotein LL041_RS05950 PF01192 RNA polymerase Rpb6 LL041_RS05955 PF00625 Guanylate kinase LL041_RS05965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LL041_RS05970 PF01180 Dihydroorotate dehydrogenase LL041_RS05975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL041_RS05975 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LL041_RS05975 PF02142 MGS-like domain LL041_RS05980 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LL041_RS05980 PF00117 Glutamine amidotransferase class-I LL041_RS05990 PF01979 Amidohydrolase family LL041_RS05995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LL041_RS05995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LL041_RS06000 PF00156 Phosphoribosyl transferase domain LL041_RS06010 PF01029 NusB family LL041_RS06015 PF08207 Elongation factor P (EF-P) KOW-like domain LL041_RS06015 PF09285 Elongation factor P, C-terminal LL041_RS06015 PF01132 Elongation factor P (EF-P) OB domain LL041_RS06020 PF00557 Metallopeptidase family M24 LL041_RS06020 PF01321 Creatinase/Prolidase N-terminal domain LL041_RS06030 PF01761 3-dehydroquinate synthase LL041_RS06035 PF01202 Shikimate kinase LL041_RS06040 PF01264 Chorismate synthase LL041_RS06050 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LL041_RS06050 PF08501 Shikimate dehydrogenase substrate binding domain LL041_RS06050 PF01488 Shikimate / quinate 5-dehydrogenase LL041_RS06060 PF03652 Holliday junction resolvase LL041_RS06065 PF02272 DHHA1 domain LL041_RS06065 PF01411 tRNA synthetases class II (A) LL041_RS06065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LL041_RS06080 PF00163 Ribosomal protein S4/S9 N-terminal domain LL041_RS06080 PF01479 S4 domain LL041_RS06085 PF16193 AAA C-terminal domain LL041_RS06085 PF12002 MgsA AAA+ ATPase C terminal LL041_RS06085 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS06095 PF03129 Anticodon binding domain LL041_RS06095 PF13393 Histidyl-tRNA synthetase LL041_RS06100 PF00753 Metallo-beta-lactamase superfamily LL041_RS06105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LL041_RS06110 PF03993 Domain of Unknown Function (DUF349) LL041_RS06115 PF13291 ACT domain LL041_RS06115 PF04607 Region found in RelA / SpoT proteins LL041_RS06115 PF02824 TGS domain LL041_RS06120 PF00156 Phosphoribosyl transferase domain LL041_RS06125 PF07549 SecD/SecF GG Motif LL041_RS06125 PF02355 Protein export membrane protein LL041_RS06130 PF02355 Protein export membrane protein LL041_RS06130 PF07549 SecD/SecF GG Motif LL041_RS06140 PF05496 Holliday junction DNA helicase RuvB P-loop domain LL041_RS06140 PF05491 RuvB C-terminal winged helix domain LL041_RS06140 PF17864 RuvB AAA lid domain LL041_RS06145 PF07499 RuvA, C-terminal domain LL041_RS06145 PF01330 RuvA N terminal domain LL041_RS06150 PF02075 Crossover junction endodeoxyribonuclease RuvC LL041_RS06155 PF01709 Transcriptional regulator LL041_RS06160 PF01174 SNO glutamine amidotransferase family LL041_RS06165 PF01680 SOR/SNZ family LL041_RS06175 PF13439 Glycosyltransferase Family 4 LL041_RS06180 PF03279 Bacterial lipid A biosynthesis acyltransferase LL041_RS06185 PF01066 CDP-alcohol phosphatidyltransferase LL041_RS06190 PF00679 Elongation factor G C-terminus LL041_RS06190 PF03764 Elongation factor G, domain IV LL041_RS06190 PF00009 Elongation factor Tu GTP binding domain LL041_RS06190 PF03144 Elongation factor Tu domain 2 LL041_RS06190 PF14492 Elongation Factor G, domain II LL041_RS06200 PF01230 HIT domain LL041_RS06205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LL041_RS06205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LL041_RS06205 PF03129 Anticodon binding domain LL041_RS06220 PF00929 Exonuclease LL041_RS06245 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS06250 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS06270 PF04686 Streptomyces sporulation and cell division protein, SsgA LL041_RS06300 PF01063 Amino-transferase class IV LL041_RS06305 PF04715 Anthranilate synthase component I, N terminal region LL041_RS06305 PF00425 chorismate binding enzyme LL041_RS06355 PF00069 Protein kinase domain LL041_RS06355 PF00400 WD domain, G-beta repeat LL041_RS06365 PF00005 ABC transporter LL041_RS06365 PF03459 TOBE domain LL041_RS06370 PF00999 Sodium/hydrogen exchanger family LL041_RS06375 PF01678 Diaminopimelate epimerase LL041_RS06380 PF13649 Methyltransferase domain LL041_RS06385 PF03621 MbtH-like protein LL041_RS06390 PF04820 Tryptophan halogenase LL041_RS06395 PF13193 AMP-binding enzyme C-terminal domain LL041_RS06395 PF00550 Phosphopantetheine attachment site LL041_RS06395 PF07993 Male sterility protein LL041_RS06395 PF00501 AMP-binding enzyme LL041_RS06395 PF00668 Condensation domain LL041_RS06400 PF00550 Phosphopantetheine attachment site LL041_RS06400 PF00668 Condensation domain LL041_RS06400 PF13193 AMP-binding enzyme C-terminal domain LL041_RS06400 PF00501 AMP-binding enzyme LL041_RS06405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS06405 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS06405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS06420 PF13193 AMP-binding enzyme C-terminal domain LL041_RS06420 PF00501 AMP-binding enzyme LL041_RS06455 PF00296 Luciferase-like monooxygenase LL041_RS06470 PF10114 Sensory domain found in PocR LL041_RS06470 PF12833 Helix-turn-helix domain LL041_RS06475 PF00588 SpoU rRNA Methylase family LL041_RS06480 PF10414 Sirohaem synthase dimerisation region LL041_RS06480 PF14824 Sirohaem biosynthesis protein central LL041_RS06480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS06485 PF02277 Phosphoribosyltransferase LL041_RS06490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS06500 PF03180 NLPA lipoprotein LL041_RS06505 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS06510 PF09383 NIL domain LL041_RS06510 PF00005 ABC transporter LL041_RS06515 PF13419 Haloacid dehalogenase-like hydrolase LL041_RS06540 PF03009 Glycerophosphoryl diester phosphodiesterase family LL041_RS06545 PF00501 AMP-binding enzyme LL041_RS06545 PF01553 Acyltransferase LL041_RS06550 PF07690 Major Facilitator Superfamily LL041_RS06565 PF14698 Argininosuccinate lyase C-terminal LL041_RS06565 PF00206 Lyase LL041_RS06570 PF00764 Arginosuccinate synthase LL041_RS06590 PF00042 Globin LL041_RS06590 PF00970 Oxidoreductase FAD-binding domain LL041_RS06590 PF00175 Oxidoreductase NAD-binding domain LL041_RS06605 PF02863 Arginine repressor, C-terminal domain LL041_RS06605 PF01316 Arginine repressor, DNA binding domain LL041_RS06610 PF00202 Aminotransferase class-III LL041_RS06615 PF00696 Amino acid kinase family LL041_RS06620 PF01960 ArgJ family LL041_RS06625 PF02774 Semialdehyde dehydrogenase, dimerisation domain LL041_RS06625 PF01118 Semialdehyde dehydrogenase, NAD binding domain LL041_RS06635 PF07681 DoxX LL041_RS06640 PF02018 Carbohydrate binding domain LL041_RS06640 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LL041_RS06665 PF00892 EamA-like transporter family LL041_RS06675 PF02638 Glycosyl hydrolase-like 10 LL041_RS06680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS06680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS06700 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LL041_RS06700 PF01588 Putative tRNA binding domain LL041_RS06700 PF03147 Ferredoxin-fold anticodon binding domain LL041_RS06700 PF03484 tRNA synthetase B5 domain LL041_RS06700 PF03483 B3/4 domain LL041_RS06705 PF01409 tRNA synthetases class II core domain (F) LL041_RS06705 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LL041_RS06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS06710 PF00672 HAMP domain LL041_RS06710 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS06710 PF00989 PAS fold LL041_RS06710 PF18698 Histidine kinase sensor domain LL041_RS06715 PF00588 SpoU rRNA Methylase family LL041_RS06715 PF08032 RNA 2'-O ribose methyltransferase substrate binding LL041_RS06720 PF00453 Ribosomal protein L20 LL041_RS06725 PF01632 Ribosomal protein L35 LL041_RS06730 PF05198 Translation initiation factor IF-3, N-terminal domain LL041_RS06730 PF00707 Translation initiation factor IF-3, C-terminal domain LL041_RS06750 PF00082 Subtilase family LL041_RS06775 PF00171 Aldehyde dehydrogenase family LL041_RS06780 PF03951 Glutamine synthetase, beta-Grasp domain LL041_RS06780 PF00120 Glutamine synthetase, catalytic domain LL041_RS06785 PF00392 Bacterial regulatory proteins, gntR family LL041_RS06785 PF07729 FCD domain LL041_RS06790 PF13520 Amino acid permease LL041_RS06795 PF07722 Peptidase C26 LL041_RS06800 PF03466 LysR substrate binding domain LL041_RS06800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS06810 PF01497 Periplasmic binding protein LL041_RS06815 PF01381 Helix-turn-helix LL041_RS06820 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS06825 PF00571 CBS domain LL041_RS06825 PF00005 ABC transporter LL041_RS06830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LL041_RS06830 PF01367 5'-3' exonuclease, C-terminal SAM fold LL041_RS06835 PF08021 Siderophore-interacting FAD-binding domain LL041_RS06835 PF04954 Siderophore-interacting protein LL041_RS06845 PF00849 RNA pseudouridylate synthase LL041_RS06850 PF00067 Cytochrome P450 LL041_RS06875 PF00270 DEAD/DEAH box helicase LL041_RS06875 PF08148 DSHCT (NUC185) domain LL041_RS06875 PF00271 Helicase conserved C-terminal domain LL041_RS06880 PF00781 Diacylglycerol kinase catalytic domain LL041_RS06885 PF00902 Sec-independent protein translocase protein (TatC) LL041_RS06890 PF02416 mttA/Hcf106 family LL041_RS06910 PF13280 WYL domain LL041_RS06915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LL041_RS06920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LL041_RS06920 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LL041_RS06925 PF03136 Pup-ligase protein LL041_RS06935 PF00356 Bacterial regulatory proteins, lacI family LL041_RS06940 PF00227 Proteasome subunit LL041_RS06945 PF00227 Proteasome subunit LL041_RS06955 PF05639 Pup-like protein LL041_RS06960 PF03136 Pup-ligase protein LL041_RS06965 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS06965 PF16450 Proteasomal ATPase OB C-terminal domain LL041_RS06965 PF17758 Proteasomal ATPase OB N-terminal domain LL041_RS06980 PF08704 tRNA methyltransferase complex GCD14 subunit LL041_RS06985 PF02163 Peptidase family M50 LL041_RS06985 PF00571 CBS domain LL041_RS06995 PF00072 Response regulator receiver domain LL041_RS06995 PF00196 Bacterial regulatory proteins, luxR family LL041_RS07000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL041_RS07005 PF13419 Haloacid dehalogenase-like hydrolase LL041_RS07010 PF00809 Pterin binding enzyme LL041_RS07010 PF02965 Vitamin B12 dependent methionine synthase, activation domain LL041_RS07010 PF02607 B12 binding domain LL041_RS07010 PF02310 B12 binding domain LL041_RS07010 PF02574 Homocysteine S-methyltransferase LL041_RS07015 PF01614 Bacterial transcriptional regulator LL041_RS07015 PF09339 IclR helix-turn-helix domain LL041_RS07020 PF00230 Major intrinsic protein LL041_RS07025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL041_RS07025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL041_RS07030 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LL041_RS07030 PF01266 FAD dependent oxidoreductase LL041_RS07035 PF07729 FCD domain LL041_RS07035 PF00392 Bacterial regulatory proteins, gntR family LL041_RS07045 PF01406 tRNA synthetases class I (C) catalytic domain LL041_RS07060 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS07065 PF01544 CorA-like Mg2+ transporter protein LL041_RS07075 PF00296 Luciferase-like monooxygenase LL041_RS07080 PF00248 Aldo/keto reductase family LL041_RS07100 PF03777 ChpA-C LL041_RS07105 PF03777 ChpA-C LL041_RS07110 PF07687 Peptidase dimerisation domain LL041_RS07110 PF01546 Peptidase family M20/M25/M40 LL041_RS07125 PF07729 FCD domain LL041_RS07125 PF00392 Bacterial regulatory proteins, gntR family LL041_RS07140 PF02447 GntP family permease LL041_RS07165 PF00293 NUDIX domain LL041_RS07170 PF02656 Domain of unknown function (DUF202) LL041_RS07180 PF00107 Zinc-binding dehydrogenase LL041_RS07180 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS07185 PF01636 Phosphotransferase enzyme family LL041_RS07190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS07190 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS07190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS07200 PF03466 LysR substrate binding domain LL041_RS07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS07205 PF00440 Bacterial regulatory proteins, tetR family LL041_RS07205 PF08361 MAATS-type transcriptional repressor, C-terminal region LL041_RS07210 PF00106 short chain dehydrogenase LL041_RS07215 PF07075 Protein of unknown function (DUF1343) LL041_RS07225 PF09278 MerR, DNA binding LL041_RS07225 PF00376 MerR family regulatory protein LL041_RS07230 PF01575 MaoC like domain LL041_RS07245 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS07245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS07245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS07260 PF00107 Zinc-binding dehydrogenase LL041_RS07260 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS07265 PF00171 Aldehyde dehydrogenase family LL041_RS07270 PF00005 ABC transporter LL041_RS07270 PF17912 MalK OB fold domain LL041_RS07280 PF03600 Citrate transporter LL041_RS07285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LL041_RS07285 PF00384 Molybdopterin oxidoreductase LL041_RS07285 PF01568 Molydopterin dinucleotide binding domain LL041_RS07290 PF17925 Tetracyclin repressor-like, C-terminal domain LL041_RS07290 PF00440 Bacterial regulatory proteins, tetR family LL041_RS07300 PF04209 homogentisate 1,2-dioxygenase LL041_RS07305 PF07702 UTRA domain LL041_RS07305 PF00392 Bacterial regulatory proteins, gntR family LL041_RS07320 PF00005 ABC transporter LL041_RS07320 PF13732 Domain of unknown function (DUF4162) LL041_RS07325 PF01061 ABC-2 type transporter LL041_RS07335 PF10099 Anti-sigma-K factor rskA LL041_RS07340 PF04542 Sigma-70 region 2 LL041_RS07340 PF04545 Sigma-70, region 4 LL041_RS07355 PF03824 High-affinity nickel-transport protein LL041_RS07360 PF03793 PASTA domain LL041_RS07360 PF00069 Protein kinase domain LL041_RS07365 PF13472 GDSL-like Lipase/Acylhydrolase family LL041_RS07370 PF00535 Glycosyl transferase family 2 LL041_RS07380 PF14883 Hypothetical glycosyl hydrolase family 13 LL041_RS07380 PF01522 Polysaccharide deacetylase LL041_RS07395 PF00392 Bacterial regulatory proteins, gntR family LL041_RS07410 PF03551 Transcriptional regulator PadR-like family LL041_RS07410 PF13847 Methyltransferase domain LL041_RS07415 PF18416 N-acetylglucosamine binding protein domain 2 LL041_RS07415 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LL041_RS07440 PF07733 Bacterial DNA polymerase III alpha NTPase domain LL041_RS07440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LL041_RS07440 PF14579 Helix-hairpin-helix motif LL041_RS07440 PF02811 PHP domain LL041_RS07450 PF02983 Alpha-lytic protease prodomain LL041_RS07450 PF00089 Trypsin LL041_RS07455 PF00089 Trypsin LL041_RS07455 PF02983 Alpha-lytic protease prodomain LL041_RS07465 PF04472 Cell division protein SepF LL041_RS07470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS07470 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS07470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS07475 PF07690 Major Facilitator Superfamily LL041_RS07485 PF01569 PAP2 superfamily LL041_RS07515 PF01926 50S ribosome-binding GTPase LL041_RS07515 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LL041_RS07525 PF02224 Cytidylate kinase LL041_RS07530 PF02153 Prephenate dehydrogenase LL041_RS07545 PF03747 ADP-ribosylglycohydrolase LL041_RS07555 PF00849 RNA pseudouridylate synthase LL041_RS07555 PF01479 S4 domain LL041_RS07560 PF04079 Segregation and condensation complex subunit ScpB LL041_RS07565 PF02616 Segregation and condensation protein ScpA LL041_RS07575 PF13614 AAA domain LL041_RS07580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LL041_RS07580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LL041_RS07590 PF00293 NUDIX domain LL041_RS07595 PF06418 CTP synthase N-terminus LL041_RS07595 PF00117 Glutamine amidotransferase class-I LL041_RS07600 PF00723 Glycosyl hydrolases family 15 LL041_RS07610 PF00534 Glycosyl transferases group 1 LL041_RS07610 PF13439 Glycosyltransferase Family 4 LL041_RS07615 PF02463 RecF/RecN/SMC N terminal domain LL041_RS07620 PF01513 ATP-NAD kinase LL041_RS07625 PF01728 FtsJ-like methyltransferase LL041_RS07625 PF01479 S4 domain LL041_RS07640 PF00005 ABC transporter LL041_RS07645 PF01032 FecCD transport family LL041_RS07650 PF01032 FecCD transport family LL041_RS07655 PF13344 Haloacid dehalogenase-like hydrolase LL041_RS07655 PF18407 GCN5-related N-acetyltransferase like domain LL041_RS07690 PF02245 Methylpurine-DNA glycosylase (MPG) LL041_RS07700 PF01161 Phosphatidylethanolamine-binding protein LL041_RS07710 PF01145 SPFH domain / Band 7 family LL041_RS07720 PF00005 ABC transporter LL041_RS07730 PF03777 ChpA-C LL041_RS07735 PF00072 Response regulator receiver domain LL041_RS07735 PF00196 Bacterial regulatory proteins, luxR family LL041_RS07740 PF07730 Histidine kinase LL041_RS07740 PF05384 Sensor protein DegS LL041_RS07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS07745 PF00106 short chain dehydrogenase LL041_RS07750 PF02547 Queuosine biosynthesis protein LL041_RS07760 PF00498 FHA domain LL041_RS07760 PF00005 ABC transporter LL041_RS07760 PF01061 ABC-2 type transporter LL041_RS07775 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS07790 PF07729 FCD domain LL041_RS07790 PF00392 Bacterial regulatory proteins, gntR family LL041_RS07805 PF01850 PIN domain LL041_RS07825 PF00579 tRNA synthetases class I (W and Y) LL041_RS07845 PF04055 Radical SAM superfamily LL041_RS07845 PF06463 Molybdenum Cofactor Synthesis C LL041_RS07850 PF00474 Sodium:solute symporter family LL041_RS07860 PF00082 Subtilase family LL041_RS07865 PF05922 Peptidase inhibitor I9 LL041_RS07865 PF00082 Subtilase family LL041_RS07870 PF02515 CoA-transferase family III LL041_RS07880 PF03120 NAD-dependent DNA ligase OB-fold domain LL041_RS07880 PF01653 NAD-dependent DNA ligase adenylation domain LL041_RS07880 PF00533 BRCA1 C Terminus (BRCT) domain LL041_RS07895 PF00474 Sodium:solute symporter family LL041_RS07910 PF00723 Glycosyl hydrolases family 15 LL041_RS07915 PF00106 short chain dehydrogenase LL041_RS07945 PF03780 Asp23 family, cell envelope-related function LL041_RS07955 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS07965 PF00005 ABC transporter LL041_RS07965 PF16326 ABC transporter C-terminal domain LL041_RS07965 PF12848 ABC transporter LL041_RS07985 PF00596 Class II Aldolase and Adducin N-terminal domain LL041_RS07990 PF01384 Phosphate transporter family LL041_RS08000 PF03186 CobD/Cbib protein LL041_RS08005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LL041_RS08005 PF07685 CobB/CobQ-like glutamine amidotransferase domain LL041_RS08010 PF02514 CobN/Magnesium Chelatase LL041_RS08015 PF07728 AAA domain (dynein-related subfamily) LL041_RS08015 PF17863 AAA lid domain LL041_RS08015 PF13519 von Willebrand factor type A domain LL041_RS08020 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LL041_RS08025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LL041_RS08025 PF07685 CobB/CobQ-like glutamine amidotransferase domain LL041_RS08030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS08040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS08045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS08050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS08055 PF02570 Precorrin-8X methylmutase LL041_RS08060 PF01903 CbiX LL041_RS08065 PF00155 Aminotransferase class I and II LL041_RS08075 PF01979 Amidohydrolase family LL041_RS08080 PF00005 ABC transporter LL041_RS08085 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS08090 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL041_RS08095 PF00266 Aminotransferase class-V LL041_RS08100 PF00583 Acetyltransferase (GNAT) family LL041_RS08105 PF00202 Aminotransferase class-III LL041_RS08110 PF06339 Ectoine synthase LL041_RS08115 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LL041_RS08120 PF00266 Aminotransferase class-V LL041_RS08140 PF07730 Histidine kinase LL041_RS08145 PF00196 Bacterial regulatory proteins, luxR family LL041_RS08145 PF00072 Response regulator receiver domain LL041_RS08150 PF00171 Aldehyde dehydrogenase family LL041_RS08155 PF09339 IclR helix-turn-helix domain LL041_RS08155 PF01614 Bacterial transcriptional regulator LL041_RS08165 PF00905 Penicillin binding protein transpeptidase domain LL041_RS08170 PF04542 Sigma-70 region 2 LL041_RS08170 PF08281 Sigma-70, region 4 LL041_RS08180 PF03211 Pectate lyase LL041_RS08185 PF03422 Carbohydrate binding module (family 6) LL041_RS08185 PF04616 Glycosyl hydrolases family 43 LL041_RS08195 PF01095 Pectinesterase LL041_RS08200 PF00544 Pectate lyase LL041_RS08205 PF13472 GDSL-like Lipase/Acylhydrolase family LL041_RS08210 PF01547 Bacterial extracellular solute-binding protein LL041_RS08215 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LL041_RS08215 PF04616 Glycosyl hydrolases family 43 LL041_RS08230 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS08235 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS08240 PF00920 Dehydratase family LL041_RS08245 PF00701 Dihydrodipicolinate synthetase family LL041_RS08250 PF00392 Bacterial regulatory proteins, gntR family LL041_RS08250 PF07729 FCD domain LL041_RS08270 PF00701 Dihydrodipicolinate synthetase family LL041_RS08275 PF01370 NAD dependent epimerase/dehydratase family LL041_RS08280 PF00455 DeoR C terminal sensor domain LL041_RS08280 PF08220 DeoR-like helix-turn-helix domain LL041_RS08290 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS08295 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS08300 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS08300 PF16912 Glucose dehydrogenase C-terminus LL041_RS08305 PF02342 TerD domain LL041_RS08310 PF00440 Bacterial regulatory proteins, tetR family LL041_RS08345 PF00701 Dihydrodipicolinate synthetase family LL041_RS08355 PF04542 Sigma-70 region 2 LL041_RS08355 PF08281 Sigma-70, region 4 LL041_RS08360 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LL041_RS08360 PF14602 Hexapeptide repeat of succinyl-transferase LL041_RS08365 PF00893 Small Multidrug Resistance protein LL041_RS08370 PF01883 Iron-sulfur cluster assembly protein LL041_RS08375 PF01592 NifU-like N terminal domain LL041_RS08380 PF00266 Aminotransferase class-V LL041_RS08385 PF00005 ABC transporter LL041_RS08390 PF00355 Rieske [2Fe-2S] domain LL041_RS08395 PF01458 Uncharacterized protein family (UPF0051) LL041_RS08400 PF01458 Uncharacterized protein family (UPF0051) LL041_RS08410 PF00005 ABC transporter LL041_RS08420 PF02628 Cytochrome oxidase assembly protein LL041_RS08440 PF01040 UbiA prenyltransferase family LL041_RS08445 PF00456 Transketolase, thiamine diphosphate binding domain LL041_RS08445 PF02779 Transketolase, pyrimidine binding domain LL041_RS08445 PF02780 Transketolase, C-terminal domain LL041_RS08450 PF00923 Transaldolase/Fructose-6-phosphate aldolase LL041_RS08455 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LL041_RS08455 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LL041_RS08465 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LL041_RS08470 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS08475 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS08480 PF01547 Bacterial extracellular solute-binding protein LL041_RS08485 PF00128 Alpha amylase, catalytic domain LL041_RS08490 PF01547 Bacterial extracellular solute-binding protein LL041_RS08495 PF03551 Transcriptional regulator PadR-like family LL041_RS08495 PF10400 Virulence activator alpha C-term LL041_RS08500 PF00005 ABC transporter LL041_RS08500 PF02687 FtsX-like permease family LL041_RS08500 PF12704 MacB-like periplasmic core domain LL041_RS08515 PF00342 Phosphoglucose isomerase LL041_RS08525 PF03840 Preprotein translocase SecG subunit LL041_RS08530 PF00121 Triosephosphate isomerase LL041_RS08535 PF00162 Phosphoglycerate kinase LL041_RS08540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LL041_RS08540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LL041_RS08545 PF05547 Immune inhibitor A peptidase M6 LL041_RS08545 PF00801 PKD domain LL041_RS08550 PF02650 WhiA C-terminal HTH domain LL041_RS08550 PF14527 WhiA LAGLIDADG-like domain LL041_RS08550 PF10298 WhiA N-terminal LAGLIDADG-like domain LL041_RS08555 PF01933 Uncharacterised protein family UPF0052 LL041_RS08560 PF03668 P-loop ATPase protein family LL041_RS08565 PF08459 UvrC Helix-hairpin-helix N-terminal LL041_RS08565 PF02151 UvrB/uvrC motif LL041_RS08565 PF01541 GIY-YIG catalytic domain LL041_RS08580 PF00355 Rieske [2Fe-2S] domain LL041_RS08585 PF00356 Bacterial regulatory proteins, lacI family LL041_RS08590 PF00294 pfkB family carbohydrate kinase LL041_RS08595 PF17760 UvrA interaction domain LL041_RS08595 PF17755 UvrA DNA-binding domain LL041_RS08595 PF00005 ABC transporter LL041_RS08605 PF00753 Metallo-beta-lactamase superfamily LL041_RS08610 PF01220 Dehydroquinase class II LL041_RS08615 PF01699 Sodium/calcium exchanger protein LL041_RS08620 PF03741 Integral membrane protein TerC family LL041_RS08625 PF02342 TerD domain LL041_RS08630 PF02342 TerD domain LL041_RS08635 PF12344 Ultra-violet resistance protein B LL041_RS08635 PF02151 UvrB/uvrC motif LL041_RS08635 PF00271 Helicase conserved C-terminal domain LL041_RS08635 PF04851 Type III restriction enzyme, res subunit LL041_RS08635 PF17757 UvrB interaction domain LL041_RS08640 PF00563 EAL domain LL041_RS08640 PF00990 Diguanylate cyclase, GGDEF domain LL041_RS08640 PF03707 Bacterial signalling protein N terminal repeat LL041_RS08645 PF03009 Glycerophosphoryl diester phosphodiesterase family LL041_RS08650 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LL041_RS08650 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LL041_RS08660 PF04227 Indigoidine synthase A like protein LL041_RS08670 PF00571 CBS domain LL041_RS08685 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS08685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LL041_RS08740 PF00082 Subtilase family LL041_RS08740 PF05922 Peptidase inhibitor I9 LL041_RS08765 PF01510 N-acetylmuramoyl-L-alanine amidase LL041_RS08780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LL041_RS08780 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS08790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL041_RS08790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL041_RS08795 PF00230 Major intrinsic protein LL041_RS08800 PF00561 alpha/beta hydrolase fold LL041_RS08805 PF03167 Uracil DNA glycosylase superfamily LL041_RS08810 PF00163 Ribosomal protein S4/S9 N-terminal domain LL041_RS08810 PF01479 S4 domain LL041_RS08830 PF01121 Dephospho-CoA kinase LL041_RS08840 PF00575 S1 RNA binding domain LL041_RS08845 PF08241 Methyltransferase domain LL041_RS08850 PF08482 ATP-dependent helicase C-terminal LL041_RS08850 PF00271 Helicase conserved C-terminal domain LL041_RS08850 PF00270 DEAD/DEAH box helicase LL041_RS08850 PF04408 Helicase associated domain (HA2) LL041_RS08870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LL041_RS08870 PF00476 DNA polymerase family A LL041_RS08870 PF01367 5'-3' exonuclease, C-terminal SAM fold LL041_RS08875 PF01568 Molydopterin dinucleotide binding domain LL041_RS08875 PF00384 Molybdopterin oxidoreductase LL041_RS08880 PF03061 Thioesterase superfamily LL041_RS08895 PF02653 Branched-chain amino acid transport system / permease component LL041_RS08900 PF11862 Domain of unknown function (DUF3382) LL041_RS08900 PF02653 Branched-chain amino acid transport system / permease component LL041_RS08905 PF12399 Branched-chain amino acid ATP-binding cassette transporter LL041_RS08905 PF00005 ABC transporter LL041_RS08910 PF00005 ABC transporter LL041_RS08915 PF00072 Response regulator receiver domain LL041_RS08915 PF03861 ANTAR domain LL041_RS08925 PF00224 Pyruvate kinase, barrel domain LL041_RS08925 PF02887 Pyruvate kinase, alpha/beta domain LL041_RS08935 PF00149 Calcineurin-like phosphoesterase LL041_RS08935 PF02872 5'-nucleotidase, C-terminal domain LL041_RS08940 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LL041_RS08945 PF01433 Peptidase family M1 domain LL041_RS08945 PF11838 ERAP1-like C-terminal domain LL041_RS08950 PF00486 Transcriptional regulatory protein, C terminal LL041_RS08950 PF00072 Response regulator receiver domain LL041_RS08955 PF02153 Prephenate dehydrogenase LL041_RS08955 PF01817 Chorismate mutase type II LL041_RS08965 PF10138 vWA found in TerF C terminus LL041_RS08975 PF01374 Glycosyl hydrolase family 46 LL041_RS08980 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS08980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LL041_RS08985 PF04898 Glutamate synthase central domain LL041_RS08985 PF01645 Conserved region in glutamate synthase LL041_RS08985 PF01493 GXGXG motif LL041_RS08985 PF00310 Glutamine amidotransferases class-II LL041_RS08995 PF03747 ADP-ribosylglycohydrolase LL041_RS09015 PF02515 CoA-transferase family III LL041_RS09020 PF03328 HpcH/HpaI aldolase/citrate lyase family LL041_RS09025 PF01790 Prolipoprotein diacylglyceryl transferase LL041_RS09035 PF00290 Tryptophan synthase alpha chain LL041_RS09040 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS09045 PF00218 Indole-3-glycerol phosphate synthase LL041_RS09065 PF04715 Anthranilate synthase component I, N terminal region LL041_RS09065 PF00425 chorismate binding enzyme LL041_RS09070 PF01502 Phosphoribosyl-AMP cyclohydrolase LL041_RS09085 PF00977 Histidine biosynthesis protein LL041_RS09090 PF01042 Endoribonuclease L-PSP LL041_RS09095 PF00977 Histidine biosynthesis protein LL041_RS09100 PF00117 Glutamine amidotransferase class-I LL041_RS09110 PF00475 Imidazoleglycerol-phosphate dehydratase LL041_RS09115 PF00155 Aminotransferase class I and II LL041_RS09120 PF00815 Histidinol dehydrogenase LL041_RS09145 PF04073 Aminoacyl-tRNA editing domain LL041_RS09160 PF00005 ABC transporter LL041_RS09160 PF13732 Domain of unknown function (DUF4162) LL041_RS09165 PF01936 NYN domain LL041_RS09180 PF14579 Helix-hairpin-helix motif LL041_RS09180 PF07733 Bacterial DNA polymerase III alpha NTPase domain LL041_RS09180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LL041_RS09180 PF02811 PHP domain LL041_RS09200 PF16655 PhoD-like phosphatase, N-terminal domain LL041_RS09200 PF09423 PhoD-like phosphatase LL041_RS09225 PF00999 Sodium/hydrogen exchanger family LL041_RS09235 PF00849 RNA pseudouridylate synthase LL041_RS09240 PF01252 Signal peptidase (SPase) II LL041_RS09245 PF01258 Prokaryotic dksA/traR C4-type zinc finger LL041_RS09250 PF00133 tRNA synthetases class I (I, L, M and V) LL041_RS09250 PF08264 Anticodon-binding domain of tRNA LL041_RS09255 PF05103 DivIVA protein LL041_RS09265 PF04472 Cell division protein SepF LL041_RS09270 PF01168 Alanine racemase, N-terminal domain LL041_RS09275 PF02578 Multi-copper polyphenol oxidoreductase laccase LL041_RS09280 PF12327 FtsZ family, C-terminal domain LL041_RS09280 PF00091 Tubulin/FtsZ family, GTPase domain LL041_RS09285 PF08478 POTRA domain, FtsQ-type LL041_RS09290 PF03033 Glycosyltransferase family 28 N-terminal domain LL041_RS09290 PF04101 Glycosyltransferase family 28 C-terminal domain LL041_RS09295 PF01098 Cell cycle protein LL041_RS09300 PF08245 Mur ligase middle domain LL041_RS09300 PF02875 Mur ligase family, glutamate ligase domain LL041_RS09305 PF00953 Glycosyl transferase family 4 LL041_RS09305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LL041_RS09310 PF01225 Mur ligase family, catalytic domain LL041_RS09310 PF02875 Mur ligase family, glutamate ligase domain LL041_RS09310 PF08245 Mur ligase middle domain LL041_RS09315 PF08245 Mur ligase middle domain LL041_RS09315 PF01225 Mur ligase family, catalytic domain LL041_RS09315 PF02875 Mur ligase family, glutamate ligase domain LL041_RS09320 PF03717 Penicillin-binding Protein dimerisation domain LL041_RS09320 PF00905 Penicillin binding protein transpeptidase domain LL041_RS09330 PF01795 MraW methylase family LL041_RS09335 PF00484 Carbonic anhydrase LL041_RS09340 PF07726 ATPase family associated with various cellular activities (AAA) LL041_RS09340 PF17863 AAA lid domain LL041_RS09370 PF00005 ABC transporter LL041_RS09380 PF08359 YsiA-like protein, C-terminal region LL041_RS09380 PF00440 Bacterial regulatory proteins, tetR family LL041_RS09385 PF01593 Flavin containing amine oxidoreductase LL041_RS09395 PF02219 Methylenetetrahydrofolate reductase LL041_RS09400 PF02581 Thiamine monophosphate synthase LL041_RS09410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS09410 PF14759 Reductase C-terminal LL041_RS09420 PF05690 Thiazole biosynthesis protein ThiG LL041_RS09420 PF01266 FAD dependent oxidoreductase LL041_RS09430 PF05690 Thiazole biosynthesis protein ThiG LL041_RS09435 PF00069 Protein kinase domain LL041_RS09435 PF03793 PASTA domain LL041_RS09440 PF01261 Xylose isomerase-like TIM barrel LL041_RS09445 PF00174 Oxidoreductase molybdopterin binding domain LL041_RS09450 PF00210 Ferritin-like domain LL041_RS09460 PF01474 Class-II DAHP synthetase family LL041_RS09465 PF00425 chorismate binding enzyme LL041_RS09465 PF00117 Glutamine amidotransferase class-I LL041_RS09470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL041_RS09470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL041_RS09475 PF00196 Bacterial regulatory proteins, luxR family LL041_RS09475 PF00072 Response regulator receiver domain LL041_RS09480 PF07730 Histidine kinase LL041_RS09480 PF00672 HAMP domain LL041_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS09490 PF12146 Serine aminopeptidase, S33 LL041_RS09505 PF00480 ROK family LL041_RS09510 PF17230 Family of unknown function (DUF5304) LL041_RS09515 PF02374 Anion-transporting ATPase LL041_RS09515 PF17886 HSP20-like domain found in ArsA LL041_RS09530 PF00501 AMP-binding enzyme LL041_RS09535 PF13439 Glycosyltransferase Family 4 LL041_RS09535 PF00534 Glycosyl transferases group 1 LL041_RS09550 PF00877 NlpC/P60 family LL041_RS09555 PF01476 LysM domain LL041_RS09555 PF00877 NlpC/P60 family LL041_RS09555 PF08239 Bacterial SH3 domain LL041_RS09580 PF00266 Aminotransferase class-V LL041_RS09585 PF00591 Glycosyl transferase family, a/b domain LL041_RS09585 PF02885 Glycosyl transferase family, helical bundle domain LL041_RS09590 PF13631 Cytochrome b(N-terminal)/b6/petB LL041_RS09595 PF00355 Rieske [2Fe-2S] domain LL041_RS09600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LL041_RS09600 PF00034 Cytochrome c LL041_RS09605 PF00510 Cytochrome c oxidase subunit III LL041_RS09615 PF03734 L,D-transpeptidase catalytic domain LL041_RS09615 PF17964 Bacterial Ig domain LL041_RS09620 PF12270 Cytochrome c oxidase subunit IV LL041_RS09625 PF00115 Cytochrome C and Quinol oxidase polypeptide I LL041_RS09630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LL041_RS09635 PF00266 Aminotransferase class-V LL041_RS09640 PF00294 pfkB family carbohydrate kinase LL041_RS09655 PF01521 Iron-sulphur cluster biosynthesis LL041_RS09660 PF02445 Quinolinate synthetase A protein LL041_RS09665 PF00873 AcrB/AcrD/AcrF family LL041_RS09670 PF00196 Bacterial regulatory proteins, luxR family LL041_RS09670 PF00072 Response regulator receiver domain LL041_RS09675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS09675 PF05384 Sensor protein DegS LL041_RS09675 PF07730 Histidine kinase LL041_RS09690 PF11241 Protein of unknown function (DUF3043) LL041_RS09705 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LL041_RS09715 PF02277 Phosphoribosyltransferase LL041_RS09725 PF02654 Cobalamin-5-phosphate synthase LL041_RS09740 PF02789 Cytosol aminopeptidase family, N-terminal domain LL041_RS09740 PF00883 Cytosol aminopeptidase family, catalytic domain LL041_RS09745 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS09745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LL041_RS09750 PF02817 e3 binding domain LL041_RS09750 PF00364 Biotin-requiring enzyme LL041_RS09750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LL041_RS09755 PF00392 Bacterial regulatory proteins, gntR family LL041_RS09755 PF07729 FCD domain LL041_RS09760 PF00456 Transketolase, thiamine diphosphate binding domain LL041_RS09760 PF17831 Pyruvate dehydrogenase E1 component middle domain LL041_RS09785 PF02674 Colicin V production protein LL041_RS09795 PF01370 NAD dependent epimerase/dehydratase family LL041_RS09795 PF08338 Domain of unknown function (DUF1731) LL041_RS09800 PF01593 Flavin containing amine oxidoreductase LL041_RS09815 PF04055 Radical SAM superfamily LL041_RS09815 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LL041_RS09825 PF13829 Domain of unknown function (DUF4191) LL041_RS09835 PF03951 Glutamine synthetase, beta-Grasp domain LL041_RS09835 PF00120 Glutamine synthetase, catalytic domain LL041_RS09845 PF01435 Peptidase family M48 LL041_RS09860 PF03960 ArsC family LL041_RS09870 PF03951 Glutamine synthetase, beta-Grasp domain LL041_RS09870 PF00120 Glutamine synthetase, catalytic domain LL041_RS09875 PF00486 Transcriptional regulatory protein, C terminal LL041_RS09890 PF00196 Bacterial regulatory proteins, luxR family LL041_RS09890 PF00072 Response regulator receiver domain LL041_RS09915 PF00440 Bacterial regulatory proteins, tetR family LL041_RS09930 PF00128 Alpha amylase, catalytic domain LL041_RS09930 PF03714 Bacterial pullanase-associated domain LL041_RS09930 PF02806 Alpha amylase, C-terminal all-beta domain LL041_RS09935 PF00128 Alpha amylase, catalytic domain LL041_RS09935 PF02806 Alpha amylase, C-terminal all-beta domain LL041_RS09940 PF00128 Alpha amylase, catalytic domain LL041_RS09945 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS09950 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS09955 PF13416 Bacterial extracellular solute-binding protein LL041_RS09960 PF00356 Bacterial regulatory proteins, lacI family LL041_RS09970 PF08335 GlnD PII-uridylyltransferase LL041_RS09970 PF03710 Glutamate-ammonia ligase adenylyltransferase LL041_RS09990 PF00544 Pectate lyase LL041_RS09995 PF00120 Glutamine synthetase, catalytic domain LL041_RS09995 PF03951 Glutamine synthetase, beta-Grasp domain LL041_RS10000 PF02082 Transcriptional regulator LL041_RS10015 PF02540 NAD synthase LL041_RS10015 PF00795 Carbon-nitrogen hydrolase LL041_RS10025 PF00440 Bacterial regulatory proteins, tetR family LL041_RS10025 PF16859 Tetracyclin repressor-like, C-terminal domain LL041_RS10030 PF07690 Major Facilitator Superfamily LL041_RS10035 PF02548 Ketopantoate hydroxymethyltransferase LL041_RS10040 PF00005 ABC transporter LL041_RS10040 PF13732 Domain of unknown function (DUF4162) LL041_RS10050 PF00196 Bacterial regulatory proteins, luxR family LL041_RS10080 PF00557 Metallopeptidase family M24 LL041_RS10085 PF01126 Heme oxygenase LL041_RS10090 PF02567 Phenazine biosynthesis-like protein LL041_RS10095 PF13473 Cupredoxin-like domain LL041_RS10095 PF09375 Imelysin LL041_RS10100 PF10518 TAT (twin-arginine translocation) pathway signal sequence LL041_RS10100 PF04261 Dyp-type peroxidase family LL041_RS10105 PF03239 Iron permease FTR1 family LL041_RS10120 PF03009 Glycerophosphoryl diester phosphodiesterase family LL041_RS10125 PF00440 Bacterial regulatory proteins, tetR family LL041_RS10140 PF00144 Beta-lactamase LL041_RS10145 PF07690 Major Facilitator Superfamily LL041_RS10150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS10150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS10165 PF00698 Acyl transferase domain LL041_RS10170 PF01614 Bacterial transcriptional regulator LL041_RS10170 PF09339 IclR helix-turn-helix domain LL041_RS10175 PF03109 ABC1 family LL041_RS10180 PF03176 MMPL family LL041_RS10180 PF12823 Domain of unknown function (DUF3817) LL041_RS10185 PF00348 Polyprenyl synthetase LL041_RS10195 PF00196 Bacterial regulatory proteins, luxR family LL041_RS10200 PF01061 ABC-2 type transporter LL041_RS10205 PF00005 ABC transporter LL041_RS10205 PF13732 Domain of unknown function (DUF4162) LL041_RS10220 PF07977 FabA-like domain LL041_RS10225 PF07977 FabA-like domain LL041_RS10230 PF00550 Phosphopantetheine attachment site LL041_RS10240 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS10240 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS10245 PF02803 Thiolase, C-terminal domain LL041_RS10245 PF00108 Thiolase, N-terminal domain LL041_RS10250 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS10250 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS10255 PF00550 Phosphopantetheine attachment site LL041_RS10260 PF01593 Flavin containing amine oxidoreductase LL041_RS10280 PF14759 Reductase C-terminal LL041_RS10280 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS10285 PF13193 AMP-binding enzyme C-terminal domain LL041_RS10285 PF00668 Condensation domain LL041_RS10285 PF00975 Thioesterase domain LL041_RS10285 PF00550 Phosphopantetheine attachment site LL041_RS10285 PF00501 AMP-binding enzyme LL041_RS10290 PF00975 Thioesterase domain LL041_RS10290 PF00501 AMP-binding enzyme LL041_RS10290 PF13193 AMP-binding enzyme C-terminal domain LL041_RS10290 PF00550 Phosphopantetheine attachment site LL041_RS10290 PF00668 Condensation domain LL041_RS10295 PF00106 short chain dehydrogenase LL041_RS10300 PF00975 Thioesterase domain LL041_RS10305 PF00975 Thioesterase domain LL041_RS10305 PF13193 AMP-binding enzyme C-terminal domain LL041_RS10305 PF00668 Condensation domain LL041_RS10305 PF00501 AMP-binding enzyme LL041_RS10305 PF00550 Phosphopantetheine attachment site LL041_RS10310 PF00668 Condensation domain LL041_RS10310 PF00550 Phosphopantetheine attachment site LL041_RS10310 PF00501 AMP-binding enzyme LL041_RS10310 PF13193 AMP-binding enzyme C-terminal domain LL041_RS10315 PF00501 AMP-binding enzyme LL041_RS10315 PF00668 Condensation domain LL041_RS10315 PF13193 AMP-binding enzyme C-terminal domain LL041_RS10315 PF00668 Condensation domain LL041_RS10315 PF00550 Phosphopantetheine attachment site LL041_RS10315 PF00501 AMP-binding enzyme LL041_RS10315 PF13193 AMP-binding enzyme C-terminal domain LL041_RS10315 PF00975 Thioesterase domain LL041_RS10315 PF00550 Phosphopantetheine attachment site LL041_RS10315 PF00975 Thioesterase domain LL041_RS10320 PF00067 Cytochrome P450 LL041_RS10325 PF06902 Divergent 4Fe-4S mono-cluster LL041_RS10335 PF07977 FabA-like domain LL041_RS10355 PF00550 Phosphopantetheine attachment site LL041_RS10360 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS10360 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS10380 PF03621 MbtH-like protein LL041_RS10385 PF03466 LysR substrate binding domain LL041_RS10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS10395 PF01476 LysM domain LL041_RS10405 PF00069 Protein kinase domain LL041_RS10405 PF03793 PASTA domain LL041_RS10410 PF00270 DEAD/DEAH box helicase LL041_RS10410 PF09369 Domain of unknown function (DUF1998) LL041_RS10410 PF00271 Helicase conserved C-terminal domain LL041_RS10415 PF18337 RapA N-terminal Tudor like domain LL041_RS10415 PF00176 SNF2 family N-terminal domain LL041_RS10415 PF12137 RNA polymerase recycling family C-terminal LL041_RS10415 PF18339 RapA N-terminal Tudor like domain 1 LL041_RS10415 PF00271 Helicase conserved C-terminal domain LL041_RS10420 PF12161 HsdM N-terminal domain LL041_RS10420 PF02384 N-6 DNA Methylase LL041_RS10435 PF01381 Helix-turn-helix LL041_RS10455 PF13538 UvrD-like helicase C-terminal domain LL041_RS10470 PF00067 Cytochrome P450 LL041_RS10475 PF00067 Cytochrome P450 LL041_RS10510 PF12852 Cupin LL041_RS10510 PF12833 Helix-turn-helix domain LL041_RS10525 PF03883 Peroxide stress protein YaaA LL041_RS10530 PF01081 KDPG and KHG aldolase LL041_RS10535 PF13456 Reverse transcriptase-like LL041_RS10535 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS10545 PF01784 NIF3 (NGG1p interacting factor 3) LL041_RS10560 PF01575 MaoC like domain LL041_RS10565 PF07730 Histidine kinase LL041_RS10565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS10570 PF00072 Response regulator receiver domain LL041_RS10570 PF00196 Bacterial regulatory proteins, luxR family LL041_RS10575 PF07690 Major Facilitator Superfamily LL041_RS10580 PF07690 Major Facilitator Superfamily LL041_RS10610 PF08241 Methyltransferase domain LL041_RS10615 PF13439 Glycosyltransferase Family 4 LL041_RS10615 PF00534 Glycosyl transferases group 1 LL041_RS10620 PF00440 Bacterial regulatory proteins, tetR family LL041_RS10620 PF17925 Tetracyclin repressor-like, C-terminal domain LL041_RS10625 PF00652 Ricin-type beta-trefoil lectin domain LL041_RS10625 PF00331 Glycosyl hydrolase family 10 LL041_RS10645 PF00005 ABC transporter LL041_RS10665 PF00083 Sugar (and other) transporter LL041_RS10665 PF08946 Osmosensory transporter coiled coil LL041_RS10670 PF01596 O-methyltransferase LL041_RS10700 PF07690 Major Facilitator Superfamily LL041_RS10710 PF13419 Haloacid dehalogenase-like hydrolase LL041_RS10770 PF09335 SNARE associated Golgi protein LL041_RS10780 PF11202 Phosphoribosyl transferase (PRTase) LL041_RS10780 PF15608 PELOTA RNA binding domain LL041_RS10795 PF02342 TerD domain LL041_RS10805 PF02342 TerD domain LL041_RS10810 PF02342 TerD domain LL041_RS10815 PF00578 AhpC/TSA family LL041_RS10820 PF11253 Protein of unknown function (DUF3052) LL041_RS10825 PF17831 Pyruvate dehydrogenase E1 component middle domain LL041_RS10825 PF00456 Transketolase, thiamine diphosphate binding domain LL041_RS10835 PF07690 Major Facilitator Superfamily LL041_RS10840 PF00440 Bacterial regulatory proteins, tetR family LL041_RS10840 PF17754 MftR C-terminal domain LL041_RS10855 PF13411 MerR HTH family regulatory protein LL041_RS10870 PF00082 Subtilase family LL041_RS10870 PF05922 Peptidase inhibitor I9 LL041_RS10890 PF17954 Quercetinase C-terminal cupin domain LL041_RS10890 PF02678 Pirin LL041_RS10895 PF17853 GGDEF-like domain LL041_RS10895 PF13556 PucR C-terminal helix-turn-helix domain LL041_RS10900 PF00698 Acyl transferase domain LL041_RS10905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LL041_RS10905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LL041_RS10910 PF00550 Phosphopantetheine attachment site LL041_RS10915 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS10915 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS10930 PF01263 Aldose 1-epimerase LL041_RS10940 PF01810 LysE type translocator LL041_RS10950 PF16884 N-terminal domain of oxidoreductase LL041_RS10950 PF00107 Zinc-binding dehydrogenase LL041_RS10965 PF13378 Enolase C-terminal domain-like LL041_RS10965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LL041_RS10970 PF00107 Zinc-binding dehydrogenase LL041_RS10970 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS10980 PF13407 Periplasmic binding protein domain LL041_RS10985 PF00005 ABC transporter LL041_RS10990 PF02653 Branched-chain amino acid transport system / permease component LL041_RS10995 PF01263 Aldose 1-epimerase LL041_RS11000 PF00155 Aminotransferase class I and II LL041_RS11005 PF04616 Glycosyl hydrolases family 43 LL041_RS11040 PF02470 MlaD protein LL041_RS11065 PF02405 Permease MlaE LL041_RS11075 PF00005 ABC transporter LL041_RS11105 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LL041_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS11115 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS11140 PF01494 FAD binding domain LL041_RS11145 PF08450 SMP-30/Gluconolactonase/LRE-like region LL041_RS11150 PF09339 IclR helix-turn-helix domain LL041_RS11150 PF01614 Bacterial transcriptional regulator LL041_RS11170 PF07729 FCD domain LL041_RS11170 PF00392 Bacterial regulatory proteins, gntR family LL041_RS11180 PF13193 AMP-binding enzyme C-terminal domain LL041_RS11180 PF00501 AMP-binding enzyme LL041_RS11185 PF01039 Carboxyl transferase domain LL041_RS11185 PF17848 Acetyl-coA carboxylase zinc finger domain LL041_RS11235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL041_RS11235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL041_RS11240 PF00664 ABC transporter transmembrane region LL041_RS11240 PF00005 ABC transporter LL041_RS11245 PF00005 ABC transporter LL041_RS11245 PF00664 ABC transporter transmembrane region LL041_RS11250 PF04542 Sigma-70 region 2 LL041_RS11250 PF00140 Sigma-70 factor, region 1.2 LL041_RS11250 PF04539 Sigma-70 region 3 LL041_RS11250 PF04545 Sigma-70, region 4 LL041_RS11255 PF13662 Toprim domain LL041_RS11255 PF01807 CHC2 zinc finger LL041_RS11255 PF08275 DNA primase catalytic core, N-terminal domain LL041_RS11255 PF08278 DNA primase DnaG DnaB-binding LL041_RS11255 PF10410 DnaB-helicase binding domain of primase LL041_RS11260 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS11260 PF14759 Reductase C-terminal LL041_RS11265 PF13286 Phosphohydrolase-associated domain LL041_RS11265 PF01966 HD domain LL041_RS11275 PF02698 DUF218 domain LL041_RS11280 PF00384 Molybdopterin oxidoreductase LL041_RS11280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LL041_RS11280 PF01568 Molydopterin dinucleotide binding domain LL041_RS11305 PF01638 HxlR-like helix-turn-helix LL041_RS11320 PF01925 Sulfite exporter TauE/SafE LL041_RS11325 PF04324 BFD-like [2Fe-2S] binding domain LL041_RS11325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LL041_RS11325 PF18267 Rubredoxin NAD+ reductase C-terminal domain LL041_RS11325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LL041_RS11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS11325 PF13806 Rieske-like [2Fe-2S] domain LL041_RS11330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LL041_RS11330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LL041_RS11330 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS11330 PF18267 Rubredoxin NAD+ reductase C-terminal domain LL041_RS11330 PF13806 Rieske-like [2Fe-2S] domain LL041_RS11330 PF04324 BFD-like [2Fe-2S] binding domain LL041_RS11350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LL041_RS11350 PF02896 PEP-utilising enzyme, TIM barrel domain LL041_RS11350 PF00391 PEP-utilising enzyme, mobile domain LL041_RS11360 PF01207 Dihydrouridine synthase (Dus) LL041_RS11365 PF07690 Major Facilitator Superfamily LL041_RS11375 PF03129 Anticodon binding domain LL041_RS11375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LL041_RS11380 PF01297 Zinc-uptake complex component A periplasmic LL041_RS11380 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LL041_RS11385 PF00005 ABC transporter LL041_RS11390 PF00950 ABC 3 transport family LL041_RS11395 PF01475 Ferric uptake regulator family LL041_RS11405 PF01255 Putative undecaprenyl diphosphate synthase LL041_RS11410 PF02565 Recombination protein O C terminal LL041_RS11410 PF11967 Recombination protein O N terminal LL041_RS11445 PF00072 Response regulator receiver domain LL041_RS11445 PF00196 Bacterial regulatory proteins, luxR family LL041_RS11450 PF07730 Histidine kinase LL041_RS11455 PF03176 MMPL family LL041_RS11500 PF08502 LeuA allosteric (dimerisation) domain LL041_RS11500 PF00682 HMGL-like LL041_RS11505 PF01447 Thermolysin metallopeptidase, catalytic domain LL041_RS11505 PF16485 Protealysin propeptide LL041_RS11505 PF02868 Thermolysin metallopeptidase, alpha-helical domain LL041_RS11515 PF00232 Glycosyl hydrolase family 1 LL041_RS11520 PF07650 KH domain LL041_RS11520 PF01926 50S ribosome-binding GTPase LL041_RS11530 PF04237 YjbR LL041_RS11535 PF03471 Transporter associated domain LL041_RS11535 PF00571 CBS domain LL041_RS11535 PF01595 Cyclin M transmembrane N-terminal domain LL041_RS11540 PF02130 Uncharacterized protein family UPF0054 LL041_RS11545 PF02562 PhoH-like protein LL041_RS11550 PF00294 pfkB family carbohydrate kinase LL041_RS11555 PF13378 Enolase C-terminal domain-like LL041_RS11555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LL041_RS11560 PF09339 IclR helix-turn-helix domain LL041_RS11560 PF01614 Bacterial transcriptional regulator LL041_RS11570 PF00962 Adenosine/AMP deaminase LL041_RS11575 PF12706 Beta-lactamase superfamily domain LL041_RS11575 PF00753 Metallo-beta-lactamase superfamily LL041_RS11580 PF01230 HIT domain LL041_RS11585 PF14685 Tricorn protease PDZ domain LL041_RS11585 PF07676 WD40-like Beta Propeller Repeat LL041_RS11585 PF14684 Tricorn protease C1 domain LL041_RS11585 PF03572 Peptidase family S41 LL041_RS11595 PF04452 RNA methyltransferase LL041_RS11600 PF03060 Nitronate monooxygenase LL041_RS11605 PF00226 DnaJ domain LL041_RS11605 PF01556 DnaJ C terminal domain LL041_RS11605 PF00684 DnaJ central domain LL041_RS11610 PF01628 HrcA protein C terminal domain LL041_RS11625 PF04055 Radical SAM superfamily LL041_RS11635 PF00501 AMP-binding enzyme LL041_RS11640 PF06421 GTP-binding protein LepA C-terminus LL041_RS11640 PF00679 Elongation factor G C-terminus LL041_RS11640 PF00009 Elongation factor Tu GTP binding domain LL041_RS11640 PF03144 Elongation factor Tu domain 2 LL041_RS11645 PF01649 Ribosomal protein S20 LL041_RS11660 PF00797 N-acetyltransferase LL041_RS11665 PF12706 Beta-lactamase superfamily domain LL041_RS11665 PF00753 Metallo-beta-lactamase superfamily LL041_RS11675 PF02645 Uncharacterised protein, DegV family COG1307 LL041_RS11685 PF08264 Anticodon-binding domain of tRNA LL041_RS11685 PF09334 tRNA synthetases class I (M) LL041_RS11685 PF13603 Leucyl-tRNA synthetase, Domain 2 LL041_RS11695 PF10531 SLBB domain LL041_RS11695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LL041_RS11695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LL041_RS11720 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS11735 PF01467 Cytidylyltransferase-like LL041_RS11745 PF01435 Peptidase family M48 LL041_RS11760 PF00171 Aldehyde dehydrogenase family LL041_RS11770 PF00696 Amino acid kinase family LL041_RS11770 PF01472 PUA domain LL041_RS11785 PF00535 Glycosyl transferase family 2 LL041_RS11795 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LL041_RS11800 PF09423 PhoD-like phosphatase LL041_RS11800 PF16655 PhoD-like phosphatase, N-terminal domain LL041_RS11810 PF01926 50S ribosome-binding GTPase LL041_RS11810 PF01018 GTP1/OBG LL041_RS11810 PF09269 Domain of unknown function (DUF1967) LL041_RS11815 PF01016 Ribosomal L27 protein LL041_RS11820 PF00829 Ribosomal prokaryotic L21 protein LL041_RS11825 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LL041_RS11830 PF04321 RmlD substrate binding domain LL041_RS11835 PF16363 GDP-mannose 4,6 dehydratase LL041_RS11840 PF00483 Nucleotidyl transferase LL041_RS11845 PF10150 Ribonuclease E/G family LL041_RS11870 PF01928 CYTH domain LL041_RS11870 PF05235 CHAD domain LL041_RS11875 PF01098 Cell cycle protein LL041_RS11880 PF00905 Penicillin binding protein transpeptidase domain LL041_RS11900 PF00334 Nucleoside diphosphate kinase LL041_RS11910 PF08245 Mur ligase middle domain LL041_RS11910 PF02875 Mur ligase family, glutamate ligase domain LL041_RS11920 PF10458 Valyl tRNA synthetase tRNA binding arm LL041_RS11920 PF08264 Anticodon-binding domain of tRNA LL041_RS11920 PF00133 tRNA synthetases class I (I, L, M and V) LL041_RS11930 PF07724 AAA domain (Cdc48 subfamily) LL041_RS11930 PF10431 C-terminal, D2-small domain, of ClpB protein LL041_RS11930 PF06689 ClpX C4-type zinc finger LL041_RS11935 PF00574 Clp protease LL041_RS11940 PF00574 Clp protease LL041_RS11945 PF05697 Bacterial trigger factor protein (TF) LL041_RS11945 PF05698 Bacterial trigger factor protein (TF) C-terminus LL041_RS11945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LL041_RS11965 PF01757 Acyltransferase family LL041_RS11980 PF13530 Sterol carrier protein domain LL041_RS11980 PF17668 Acetyltransferase (GNAT) domain LL041_RS11985 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LL041_RS11985 PF06827 Zinc finger found in FPG and IleRS LL041_RS11985 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LL041_RS11990 PF02502 Ribose/Galactose Isomerase LL041_RS11995 PF00324 Amino acid permease LL041_RS12005 PF00324 Amino acid permease LL041_RS12015 PF01323 DSBA-like thioredoxin domain LL041_RS12020 PF01433 Peptidase family M1 domain LL041_RS12020 PF11838 ERAP1-like C-terminal domain LL041_RS12040 PF00082 Subtilase family LL041_RS12050 PF04542 Sigma-70 region 2 LL041_RS12050 PF04545 Sigma-70, region 4 LL041_RS12055 PF01118 Semialdehyde dehydrogenase, NAD binding domain LL041_RS12055 PF02774 Semialdehyde dehydrogenase, dimerisation domain LL041_RS12070 PF01433 Peptidase family M1 domain LL041_RS12070 PF11838 ERAP1-like C-terminal domain LL041_RS12075 PF00440 Bacterial regulatory proteins, tetR family LL041_RS12085 PF00892 EamA-like transporter family LL041_RS12090 PF01047 MarR family LL041_RS12100 PF02446 4-alpha-glucanotransferase LL041_RS12110 PF02838 Glycosyl hydrolase family 20, domain 2 LL041_RS12110 PF00963 Cohesin domain LL041_RS12110 PF00754 F5/8 type C domain LL041_RS12110 PF00041 Fibronectin type III domain LL041_RS12110 PF07555 beta-N-acetylglucosaminidase LL041_RS12120 PF00005 ABC transporter LL041_RS12135 PF00924 Mechanosensitive ion channel LL041_RS12145 PF02056 Family 4 glycosyl hydrolase LL041_RS12145 PF11975 Family 4 glycosyl hydrolase C-terminal domain LL041_RS12160 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL041_RS12170 PF16918 Protein kinase G tetratricopeptide repeat LL041_RS12170 PF16919 Protein kinase G rubredoxin domain LL041_RS12170 PF00069 Protein kinase domain LL041_RS12195 PF01152 Bacterial-like globin LL041_RS12210 PF00005 ABC transporter LL041_RS12225 PF00005 ABC transporter LL041_RS12225 PF12848 ABC transporter LL041_RS12250 PF00436 Single-strand binding protein family LL041_RS12295 PF03777 ChpA-C LL041_RS12300 PF00264 Common central domain of tyrosinase LL041_RS12305 PF06236 Tyrosinase co-factor MelC1 LL041_RS12325 PF00534 Glycosyl transferases group 1 LL041_RS12325 PF13579 Glycosyl transferase 4-like domain LL041_RS12330 PF02397 Bacterial sugar transferase LL041_RS12340 PF03023 Lipid II flippase MurJ LL041_RS12350 PF00534 Glycosyl transferases group 1 LL041_RS12350 PF13439 Glycosyltransferase Family 4 LL041_RS12365 PF02222 ATP-grasp domain LL041_RS12365 PF01370 NAD dependent epimerase/dehydratase family LL041_RS12370 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS12385 PF00005 ABC transporter LL041_RS12390 PF00171 Aldehyde dehydrogenase family LL041_RS12400 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS12400 PF00107 Zinc-binding dehydrogenase LL041_RS12410 PF00403 Heavy-metal-associated domain LL041_RS12415 PF00285 Citrate synthase, C-terminal domain LL041_RS12420 PF14490 Helix-hairpin-helix containing domain LL041_RS12420 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LL041_RS12420 PF13538 UvrD-like helicase C-terminal domain LL041_RS12465 PF00356 Bacterial regulatory proteins, lacI family LL041_RS12470 PF00005 ABC transporter LL041_RS12475 PF13407 Periplasmic binding protein domain LL041_RS12480 PF00294 pfkB family carbohydrate kinase LL041_RS12485 PF05025 RbsD / FucU transport protein family LL041_RS12500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS12500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS12505 PF00356 Bacterial regulatory proteins, lacI family LL041_RS12515 PF05977 Transmembrane secretion effector LL041_RS12520 PF00892 EamA-like transporter family LL041_RS12525 PF03466 LysR substrate binding domain LL041_RS12525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS12530 PF01915 Glycosyl hydrolase family 3 C-terminal domain LL041_RS12530 PF00933 Glycosyl hydrolase family 3 N terminal domain LL041_RS12545 PF05576 PS-10 peptidase S37 LL041_RS12555 PF00005 ABC transporter LL041_RS12555 PF00664 ABC transporter transmembrane region LL041_RS12560 PF04231 Endonuclease I LL041_RS12570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS12570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL041_RS12570 PF00205 Thiamine pyrophosphate enzyme, central domain LL041_RS12575 PF00491 Arginase family LL041_RS12585 PF15698 Phosphatase LL041_RS12595 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS12595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS12595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS12600 PF00440 Bacterial regulatory proteins, tetR family LL041_RS12605 PF01039 Carboxyl transferase domain LL041_RS12610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL041_RS12610 PF02785 Biotin carboxylase C-terminal domain LL041_RS12610 PF00364 Biotin-requiring enzyme LL041_RS12610 PF00289 Biotin carboxylase, N-terminal domain LL041_RS12615 PF00682 HMGL-like LL041_RS12620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS12620 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS12620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS12630 PF00196 Bacterial regulatory proteins, luxR family LL041_RS12635 PF08924 Domain of unknown function (DUF1906) LL041_RS12635 PF01471 Putative peptidoglycan binding domain LL041_RS12655 PF00282 Pyridoxal-dependent decarboxylase conserved domain LL041_RS12660 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LL041_RS12670 PF06276 Ferric iron reductase FhuF-like transporter LL041_RS12670 PF04183 IucA / IucC family LL041_RS12685 PF01380 SIS domain LL041_RS12690 PF00582 Universal stress protein family LL041_RS12695 PF01965 DJ-1/PfpI family LL041_RS12695 PF12833 Helix-turn-helix domain LL041_RS12700 PF00929 Exonuclease LL041_RS12710 PF00356 Bacterial regulatory proteins, lacI family LL041_RS12720 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS12725 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS12730 PF00232 Glycosyl hydrolase family 1 LL041_RS12735 PF02839 Carbohydrate binding domain LL041_RS12745 PF00072 Response regulator receiver domain LL041_RS12745 PF00486 Transcriptional regulatory protein, C terminal LL041_RS12770 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS12815 PF03707 Bacterial signalling protein N terminal repeat LL041_RS12815 PF00990 Diguanylate cyclase, GGDEF domain LL041_RS12815 PF00563 EAL domain LL041_RS12820 PF00296 Luciferase-like monooxygenase LL041_RS12835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL041_RS12835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL041_RS12840 PF01425 Amidase LL041_RS12850 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL041_RS12855 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS12860 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS12865 PF00005 ABC transporter LL041_RS12875 PF18416 N-acetylglucosamine binding protein domain 2 LL041_RS12875 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LL041_RS12905 PF01341 Glycosyl hydrolases family 6 LL041_RS12905 PF00553 Cellulose binding domain LL041_RS12915 PF13344 Haloacid dehalogenase-like hydrolase LL041_RS12920 PF00480 ROK family LL041_RS12925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS12925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS12930 PF03928 Haem-degrading LL041_RS12940 PF14849 YidC periplasmic domain LL041_RS12940 PF02096 60Kd inner membrane protein LL041_RS12965 PF12706 Beta-lactamase superfamily domain LL041_RS12975 PF00145 C-5 cytosine-specific DNA methylase LL041_RS12980 PF03852 DNA mismatch endonuclease Vsr LL041_RS13025 PF01243 Pyridoxamine 5'-phosphate oxidase LL041_RS13030 PF17925 Tetracyclin repressor-like, C-terminal domain LL041_RS13030 PF00440 Bacterial regulatory proteins, tetR family LL041_RS13040 PF00440 Bacterial regulatory proteins, tetR family LL041_RS13045 PF12464 Maltose acetyltransferase LL041_RS13045 PF14602 Hexapeptide repeat of succinyl-transferase LL041_RS13070 PF07690 Major Facilitator Superfamily LL041_RS13075 PF04286 Protein of unknown function (DUF445) LL041_RS13085 PF08044 Domain of unknown function (DUF1707) LL041_RS13090 PF00005 ABC transporter LL041_RS13105 PF00912 Transglycosylase LL041_RS13105 PF00905 Penicillin binding protein transpeptidase domain LL041_RS13110 PF00893 Small Multidrug Resistance protein LL041_RS13125 PF00578 AhpC/TSA family LL041_RS13145 PF01725 Ham1 family LL041_RS13155 PF03725 3' exoribonuclease family, domain 2 LL041_RS13155 PF01138 3' exoribonuclease family, domain 1 LL041_RS13160 PF00367 phosphotransferase system, EIIB LL041_RS13165 PF02378 Phosphotransferase system, EIIC LL041_RS13170 PF02378 Phosphotransferase system, EIIC LL041_RS13175 PF12706 Beta-lactamase superfamily domain LL041_RS13185 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS13190 PF02597 ThiS family LL041_RS13195 PF14464 Prokaryotic homologs of the JAB domain LL041_RS13200 PF00324 Amino acid permease LL041_RS13210 PF02617 ATP-dependent Clp protease adaptor protein ClpS LL041_RS13215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LL041_RS13215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LL041_RS13220 PF00857 Isochorismatase family LL041_RS13230 PF05547 Immune inhibitor A peptidase M6 LL041_RS13230 PF00801 PKD domain LL041_RS13250 PF02913 FAD linked oxidases, C-terminal domain LL041_RS13250 PF01565 FAD binding domain LL041_RS13260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL041_RS13270 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS13275 PF00005 ABC transporter LL041_RS13275 PF00571 CBS domain LL041_RS13280 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS13285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LL041_RS13300 PF04851 Type III restriction enzyme, res subunit LL041_RS13305 PF02661 Fic/DOC family LL041_RS13315 PF07690 Major Facilitator Superfamily LL041_RS13335 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LL041_RS13335 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LL041_RS13340 PF00111 2Fe-2S iron-sulfur cluster binding domain LL041_RS13340 PF01799 [2Fe-2S] binding domain LL041_RS13350 PF00728 Glycosyl hydrolase family 20, catalytic domain LL041_RS13350 PF02838 Glycosyl hydrolase family 20, domain 2 LL041_RS13350 PF07691 PA14 domain LL041_RS13355 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS13360 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS13375 PF02622 Uncharacterized ACR, COG1678 LL041_RS13380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LL041_RS13385 PF00216 Bacterial DNA-binding protein LL041_RS13390 PF00390 Malic enzyme, N-terminal domain LL041_RS13390 PF03949 Malic enzyme, NAD binding domain LL041_RS13395 PF13538 UvrD-like helicase C-terminal domain LL041_RS13405 PF04542 Sigma-70 region 2 LL041_RS13405 PF04545 Sigma-70, region 4 LL041_RS13420 PF07690 Major Facilitator Superfamily LL041_RS13460 PF07690 Major Facilitator Superfamily LL041_RS13475 PF01522 Polysaccharide deacetylase LL041_RS13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS13485 PF03466 LysR substrate binding domain LL041_RS13495 PF00356 Bacterial regulatory proteins, lacI family LL041_RS13500 PF10503 Esterase PHB depolymerase LL041_RS13510 PF01668 SmpB protein LL041_RS13515 PF17820 PDZ domain LL041_RS13515 PF01471 Putative peptidoglycan binding domain LL041_RS13515 PF03572 Peptidase family S41 LL041_RS13520 PF02687 FtsX-like permease family LL041_RS13520 PF18075 FtsX extracellular domain LL041_RS13525 PF00005 ABC transporter LL041_RS13540 PF03462 PCRF domain LL041_RS13540 PF00472 RF-1 domain LL041_RS13545 PF00069 Protein kinase domain LL041_RS13550 PF00069 Protein kinase domain LL041_RS13555 PF01580 FtsK/SpoIIIE family LL041_RS13565 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS13570 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS13575 PF00535 Glycosyl transferase family 2 LL041_RS13575 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LL041_RS13580 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LL041_RS13585 PF00535 Glycosyl transferase family 2 LL041_RS13600 PF02566 OsmC-like protein LL041_RS13605 PF01047 MarR family LL041_RS13610 PF00535 Glycosyl transferase family 2 LL041_RS13615 PF01370 NAD dependent epimerase/dehydratase family LL041_RS13630 PF00005 ABC transporter LL041_RS13630 PF01476 LysM domain LL041_RS13635 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LL041_RS13640 PF00535 Glycosyl transferase family 2 LL041_RS13650 PF05088 Bacterial NAD-glutamate dehydrogenase LL041_RS13670 PF07516 SecA Wing and Scaffold domain LL041_RS13670 PF01043 SecA preprotein cross-linking domain LL041_RS13670 PF07517 SecA DEAD-like domain LL041_RS13680 PF06224 Winged helix DNA-binding domain LL041_RS13685 PF00196 Bacterial regulatory proteins, luxR family LL041_RS13685 PF00072 Response regulator receiver domain LL041_RS13690 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LL041_RS13690 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LL041_RS13700 PF10647 Lipoprotein LpqB beta-propeller domain LL041_RS13700 PF10646 Sporulation and spore germination LL041_RS13705 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS13705 PF00672 HAMP domain LL041_RS13705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS13710 PF00486 Transcriptional regulatory protein, C terminal LL041_RS13710 PF00072 Response regulator receiver domain LL041_RS13715 PF01008 Initiation factor 2 subunit family LL041_RS13730 PF14258 Domain of unknown function (DUF4350) LL041_RS13735 PF17863 AAA lid domain LL041_RS13735 PF07726 ATPase family associated with various cellular activities (AAA) LL041_RS13775 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LL041_RS13775 PF05221 S-adenosyl-L-homocysteine hydrolase LL041_RS13785 PF01238 Phosphomannose isomerase type I LL041_RS13795 PF03966 Trm112p-like protein LL041_RS13800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LL041_RS13800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LL041_RS13800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LL041_RS13800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LL041_RS13805 PF02652 L-lactate permease LL041_RS13825 PF00534 Glycosyl transferases group 1 LL041_RS13825 PF00535 Glycosyl transferase family 2 LL041_RS13830 PF02467 Transcription factor WhiB LL041_RS13840 PF01933 Uncharacterised protein family UPF0052 LL041_RS13845 PF00881 Nitroreductase family LL041_RS13845 PF01996 F420-0:Gamma-glutamyl ligase LL041_RS13855 PF00483 Nucleotidyl transferase LL041_RS13870 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS13875 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS13880 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS13880 PF13399 LytR cell envelope-related transcriptional attenuator LL041_RS13885 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS13895 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS13905 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS13915 PF13396 Phospholipase_D-nuclease N-terminal LL041_RS13915 PF13091 PLD-like domain LL041_RS13920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS13920 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS13920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS13925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LL041_RS13925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LL041_RS13925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LL041_RS13955 PF00731 AIR carboxylase LL041_RS13960 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LL041_RS13960 PF02222 ATP-grasp domain LL041_RS13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS13970 PF00672 HAMP domain LL041_RS13970 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS13975 PF00486 Transcriptional regulatory protein, C terminal LL041_RS13975 PF00072 Response regulator receiver domain LL041_RS13980 PF00854 POT family LL041_RS13990 PF01740 STAS domain LL041_RS13995 PF04539 Sigma-70 region 3 LL041_RS13995 PF04542 Sigma-70 region 2 LL041_RS13995 PF04545 Sigma-70, region 4 LL041_RS14000 PF01979 Amidohydrolase family LL041_RS14010 PF01546 Peptidase family M20/M25/M40 LL041_RS14010 PF07687 Peptidase dimerisation domain LL041_RS14015 PF17392 Urocanase C-terminal domain LL041_RS14015 PF01175 Urocanase Rossmann-like domain LL041_RS14015 PF17391 Urocanase N-terminal domain LL041_RS14020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LL041_RS14020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LL041_RS14035 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS14045 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS14045 PF00571 CBS domain LL041_RS14050 PF13472 GDSL-like Lipase/Acylhydrolase family LL041_RS14055 PF00108 Thiolase, N-terminal domain LL041_RS14055 PF02803 Thiolase, C-terminal domain LL041_RS14090 PF02687 FtsX-like permease family LL041_RS14090 PF12704 MacB-like periplasmic core domain LL041_RS14090 PF00005 ABC transporter LL041_RS14095 PF02687 FtsX-like permease family LL041_RS14095 PF12704 MacB-like periplasmic core domain LL041_RS14105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS14110 PF02541 Ppx/GppA phosphatase family LL041_RS14125 PF03952 Enolase, N-terminal domain LL041_RS14125 PF00113 Enolase, C-terminal TIM barrel domain LL041_RS14130 PF06737 Transglycosylase-like domain LL041_RS14135 PF06737 Transglycosylase-like domain LL041_RS14140 PF00067 Cytochrome P450 LL041_RS14145 PF03819 MazG nucleotide pyrophosphohydrolase domain LL041_RS14155 PF00069 Protein kinase domain LL041_RS14155 PF03793 PASTA domain LL041_RS14195 PF02559 CarD-like/TRCF domain LL041_RS14195 PF00270 DEAD/DEAH box helicase LL041_RS14195 PF00271 Helicase conserved C-terminal domain LL041_RS14195 PF03461 TRCF domain LL041_RS14195 PF17757 UvrB interaction domain LL041_RS14200 PF02687 FtsX-like permease family LL041_RS14200 PF12704 MacB-like periplasmic core domain LL041_RS14205 PF00005 ABC transporter LL041_RS14235 PF07730 Histidine kinase LL041_RS14250 PF00132 Bacterial transferase hexapeptide (six repeats) LL041_RS14250 PF12804 MobA-like NTP transferase domain LL041_RS14255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LL041_RS14255 PF14572 Phosphoribosyl synthetase-associated domain LL041_RS14260 PF01386 Ribosomal L25p family LL041_RS14260 PF14693 Ribosomal protein TL5, C-terminal domain LL041_RS14265 PF01195 Peptidyl-tRNA hydrolase LL041_RS14275 PF00311 Phosphoenolpyruvate carboxylase LL041_RS14285 PF00440 Bacterial regulatory proteins, tetR family LL041_RS14290 PF13649 Methyltransferase domain LL041_RS14295 PF01047 MarR family LL041_RS14300 PF00196 Bacterial regulatory proteins, luxR family LL041_RS14300 PF00072 Response regulator receiver domain LL041_RS14310 PF10509 Galactokinase galactose-binding signature LL041_RS14310 PF08544 GHMP kinases C terminal LL041_RS14310 PF00288 GHMP kinases N terminal domain LL041_RS14315 PF16363 GDP-mannose 4,6 dehydratase LL041_RS14320 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LL041_RS14320 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LL041_RS14325 PF00474 Sodium:solute symporter family LL041_RS14335 PF00196 Bacterial regulatory proteins, luxR family LL041_RS14335 PF00072 Response regulator receiver domain LL041_RS14350 PF00005 ABC transporter LL041_RS14350 PF16326 ABC transporter C-terminal domain LL041_RS14350 PF12848 ABC transporter LL041_RS14355 PF00288 GHMP kinases N terminal domain LL041_RS14355 PF08544 GHMP kinases C terminal LL041_RS14360 PF00398 Ribosomal RNA adenine dimethylase LL041_RS14365 PF01026 TatD related DNase LL041_RS14375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS14380 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LL041_RS14380 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase LL041_RS14405 PF13190 PDGLE domain LL041_RS14405 PF01891 Cobalt uptake substrate-specific transmembrane region LL041_RS14415 PF00005 ABC transporter LL041_RS14420 PF01047 MarR family LL041_RS14425 PF00144 Beta-lactamase LL041_RS14450 PF03176 MMPL family LL041_RS14455 PF00440 Bacterial regulatory proteins, tetR family LL041_RS14455 PF16859 Tetracyclin repressor-like, C-terminal domain LL041_RS14460 PF07676 WD40-like Beta Propeller Repeat LL041_RS14460 PF03572 Peptidase family S41 LL041_RS14460 PF14684 Tricorn protease C1 domain LL041_RS14460 PF14685 Tricorn protease PDZ domain LL041_RS14475 PF00561 alpha/beta hydrolase fold LL041_RS14480 PF00743 Flavin-binding monooxygenase-like LL041_RS14490 PF00293 NUDIX domain LL041_RS14495 PF03372 Endonuclease/Exonuclease/phosphatase family LL041_RS14535 PF01967 MoaC family LL041_RS14535 PF00994 Probable molybdopterin binding domain LL041_RS14540 PF01967 MoaC family LL041_RS14545 PF00994 Probable molybdopterin binding domain LL041_RS14545 PF03454 MoeA C-terminal region (domain IV) LL041_RS14545 PF03453 MoeA N-terminal region (domain I and II) LL041_RS14550 PF00483 Nucleotidyl transferase LL041_RS14555 PF01812 5-formyltetrahydrofolate cyclo-ligase family LL041_RS14565 PF03471 Transporter associated domain LL041_RS14565 PF02080 TrkA-C domain LL041_RS14565 PF00999 Sodium/hydrogen exchanger family LL041_RS14580 PF01048 Phosphorylase superfamily LL041_RS14590 PF01741 Large-conductance mechanosensitive channel, MscL LL041_RS14600 PF03576 Peptidase family S58 LL041_RS14615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LL041_RS14615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LL041_RS14620 PF00294 pfkB family carbohydrate kinase LL041_RS14625 PF00455 DeoR C terminal sensor domain LL041_RS14625 PF08220 DeoR-like helix-turn-helix domain LL041_RS14630 PF07690 Major Facilitator Superfamily LL041_RS14640 PF17754 MftR C-terminal domain LL041_RS14640 PF00440 Bacterial regulatory proteins, tetR family LL041_RS14645 PF00140 Sigma-70 factor, region 1.2 LL041_RS14645 PF04542 Sigma-70 region 2 LL041_RS14645 PF04539 Sigma-70 region 3 LL041_RS14645 PF04545 Sigma-70, region 4 LL041_RS14655 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LL041_RS14660 PF01047 MarR family LL041_RS14665 PF07690 Major Facilitator Superfamily LL041_RS14685 PF14659 Phage integrase, N-terminal SAM-like domain LL041_RS14685 PF00589 Phage integrase family LL041_RS14690 PF12728 Helix-turn-helix domain LL041_RS14720 PF01580 FtsK/SpoIIIE family LL041_RS14750 PF00665 Integrase core domain LL041_RS14770 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LL041_RS14770 PF18766 SWI2/SNF2 ATPase LL041_RS14770 PF11867 Domain of unknown function (DUF3387) LL041_RS14780 PF02384 N-6 DNA Methylase LL041_RS14780 PF12161 HsdM N-terminal domain LL041_RS14785 PF02384 N-6 DNA Methylase LL041_RS14790 PF02661 Fic/DOC family LL041_RS14830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LL041_RS14830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LL041_RS14845 PF00107 Zinc-binding dehydrogenase LL041_RS14845 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS14850 PF00282 Pyridoxal-dependent decarboxylase conserved domain LL041_RS14860 PF00580 UvrD/REP helicase N-terminal domain LL041_RS14860 PF13361 UvrD-like helicase C-terminal domain LL041_RS14930 PF00255 Glutathione peroxidase LL041_RS14955 PF00768 D-alanyl-D-alanine carboxypeptidase LL041_RS14955 PF07943 Penicillin-binding protein 5, C-terminal domain LL041_RS14975 PF01551 Peptidase family M23 LL041_RS14980 PF00069 Protein kinase domain LL041_RS14980 PF03793 PASTA domain LL041_RS14990 PF01476 LysM domain LL041_RS14990 PF00756 Putative esterase LL041_RS15000 PF04055 Radical SAM superfamily LL041_RS15005 PF00296 Luciferase-like monooxygenase LL041_RS15020 PF03704 Bacterial transcriptional activator domain LL041_RS15020 PF00931 NB-ARC domain LL041_RS15020 PF00486 Transcriptional regulatory protein, C terminal LL041_RS15035 PF13360 PQQ-like domain LL041_RS15035 PF00069 Protein kinase domain LL041_RS15040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL041_RS15040 PF18029 Glyoxalase-like domain LL041_RS15045 PF00440 Bacterial regulatory proteins, tetR family LL041_RS15055 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LL041_RS15055 PF01243 Pyridoxamine 5'-phosphate oxidase LL041_RS15070 PF07690 Major Facilitator Superfamily LL041_RS15075 PF01965 DJ-1/PfpI family LL041_RS15090 PF01740 STAS domain LL041_RS15105 PF00551 Formyl transferase LL041_RS15135 PF13732 Domain of unknown function (DUF4162) LL041_RS15135 PF00005 ABC transporter LL041_RS15145 PF12697 Alpha/beta hydrolase family LL041_RS15150 PF18357 Diphteria toxin repressor SH3 domain LL041_RS15150 PF02742 Iron dependent repressor, metal binding and dimerisation domain LL041_RS15150 PF01325 Iron dependent repressor, N-terminal DNA binding domain LL041_RS15155 PF13580 SIS domain LL041_RS15170 PF00860 Permease family LL041_RS15175 PF00285 Citrate synthase, C-terminal domain LL041_RS15180 PF01243 Pyridoxamine 5'-phosphate oxidase LL041_RS15180 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LL041_RS15190 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS15195 PF00501 AMP-binding enzyme LL041_RS15195 PF13193 AMP-binding enzyme C-terminal domain LL041_RS15200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS15200 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS15200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS15205 PF00289 Biotin carboxylase, N-terminal domain LL041_RS15205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL041_RS15205 PF00364 Biotin-requiring enzyme LL041_RS15205 PF02785 Biotin carboxylase C-terminal domain LL041_RS15210 PF01039 Carboxyl transferase domain LL041_RS15220 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain LL041_RS15220 PF08608 Wyosine base formation LL041_RS15235 PF00892 EamA-like transporter family LL041_RS15240 PF00293 NUDIX domain LL041_RS15240 PF13344 Haloacid dehalogenase-like hydrolase LL041_RS15245 PF13183 4Fe-4S dicluster domain LL041_RS15245 PF02913 FAD linked oxidases, C-terminal domain LL041_RS15245 PF01565 FAD binding domain LL041_RS15270 PF00067 Cytochrome P450 LL041_RS15275 PF00067 Cytochrome P450 LL041_RS15280 PF00266 Aminotransferase class-V LL041_RS15290 PF13732 Domain of unknown function (DUF4162) LL041_RS15290 PF00005 ABC transporter LL041_RS15315 PF00248 Aldo/keto reductase family LL041_RS15335 PF01047 MarR family LL041_RS15345 PF00860 Permease family LL041_RS15365 PF13462 Thioredoxin LL041_RS15365 PF06965 Na+/H+ antiporter 1 LL041_RS15385 PF01551 Peptidase family M23 LL041_RS15385 PF08525 Opacity-associated protein A N-terminal motif LL041_RS15385 PF01476 LysM domain LL041_RS15415 PF11228 Protein of unknown function (DUF3027) LL041_RS15420 PF07690 Major Facilitator Superfamily LL041_RS15430 PF01048 Phosphorylase superfamily LL041_RS15435 PF02621 Menaquinone biosynthesis LL041_RS15465 PF00271 Helicase conserved C-terminal domain LL041_RS15465 PF04851 Type III restriction enzyme, res subunit LL041_RS15475 PF13538 UvrD-like helicase C-terminal domain LL041_RS15480 PF03932 CutC family LL041_RS15490 PF00082 Subtilase family LL041_RS15490 PF04151 Bacterial pre-peptidase C-terminal domain LL041_RS15515 PF01418 Helix-turn-helix domain, rpiR family LL041_RS15515 PF01380 SIS domain LL041_RS15520 PF01380 SIS domain LL041_RS15535 PF07690 Major Facilitator Superfamily LL041_RS15540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LL041_RS15540 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS15545 PF00118 TCP-1/cpn60 chaperonin family LL041_RS15550 PF00313 'Cold-shock' DNA-binding domain LL041_RS15555 PF02597 ThiS family LL041_RS15560 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS15565 PF00535 Glycosyl transferase family 2 LL041_RS15570 PF00982 Glycosyltransferase family 20 LL041_RS15570 PF05116 Sucrose-6F-phosphate phosphohydrolase LL041_RS15585 PF01547 Bacterial extracellular solute-binding protein LL041_RS15590 PF00480 ROK family LL041_RS15595 PF01979 Amidohydrolase family LL041_RS15600 PF00294 pfkB family carbohydrate kinase LL041_RS15610 PF03707 Bacterial signalling protein N terminal repeat LL041_RS15610 PF13188 PAS domain LL041_RS15610 PF00990 Diguanylate cyclase, GGDEF domain LL041_RS15610 PF00563 EAL domain LL041_RS15615 PF01613 Flavin reductase like domain LL041_RS15625 PF03462 PCRF domain LL041_RS15625 PF00472 RF-1 domain LL041_RS15630 PF02342 TerD domain LL041_RS15655 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS15655 PF00107 Zinc-binding dehydrogenase LL041_RS15660 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LL041_RS15675 PF08279 HTH domain LL041_RS15675 PF13280 WYL domain LL041_RS15680 PF00005 ABC transporter LL041_RS15680 PF17912 MalK OB fold domain LL041_RS15690 PF00483 Nucleotidyl transferase LL041_RS15700 PF08032 RNA 2'-O ribose methyltransferase substrate binding LL041_RS15700 PF00588 SpoU rRNA Methylase family LL041_RS15705 PF09190 DALR domain LL041_RS15705 PF01406 tRNA synthetases class I (C) catalytic domain LL041_RS15710 PF02542 YgbB family LL041_RS15715 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LL041_RS15720 PF02559 CarD-like/TRCF domain LL041_RS15730 PF00072 Response regulator receiver domain LL041_RS15730 PF00486 Transcriptional regulatory protein, C terminal LL041_RS15735 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS15740 PF01895 PhoU domain LL041_RS15750 PF07690 Major Facilitator Superfamily LL041_RS15755 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS15760 PF03575 Peptidase family S51 LL041_RS15770 PF13744 Helix-turn-helix domain LL041_RS15775 PF05973 Phage derived protein Gp49-like (DUF891) LL041_RS15845 PF10722 Putative bacterial sensory transduction regulator LL041_RS15850 PF13439 Glycosyltransferase Family 4 LL041_RS15850 PF00534 Glycosyl transferases group 1 LL041_RS15860 PF00877 NlpC/P60 family LL041_RS15870 PF10724 Protein of unknown function (DUF2516) LL041_RS15885 PF01381 Helix-turn-helix LL041_RS15895 PF04978 Protein of unknown function (DUF664) LL041_RS15900 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS15905 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS15910 PF01547 Bacterial extracellular solute-binding protein LL041_RS15915 PF00155 Aminotransferase class I and II LL041_RS15920 PF07729 FCD domain LL041_RS15920 PF00392 Bacterial regulatory proteins, gntR family LL041_RS15925 PF13538 UvrD-like helicase C-terminal domain LL041_RS15930 PF00440 Bacterial regulatory proteins, tetR family LL041_RS15935 PF00392 Bacterial regulatory proteins, gntR family LL041_RS15935 PF07729 FCD domain LL041_RS15945 PF13419 Haloacid dehalogenase-like hydrolase LL041_RS15950 PF00392 Bacterial regulatory proteins, gntR family LL041_RS15950 PF07702 UTRA domain LL041_RS15970 PF17668 Acetyltransferase (GNAT) domain LL041_RS15970 PF13530 Sterol carrier protein domain LL041_RS15980 PF02580 D-Tyr-tRNA(Tyr) deacylase LL041_RS15990 PF01475 Ferric uptake regulator family LL041_RS15995 PF08768 Domain of unknown function (DUF1794) LL041_RS16025 PF07210 Protein of unknown function (DUF1416) LL041_RS16030 PF00581 Rhodanese-like domain LL041_RS16055 PF00486 Transcriptional regulatory protein, C terminal LL041_RS16060 PF00356 Bacterial regulatory proteins, lacI family LL041_RS16065 PF13180 PDZ domain LL041_RS16070 PF00072 Response regulator receiver domain LL041_RS16070 PF00486 Transcriptional regulatory protein, C terminal LL041_RS16075 PF00672 HAMP domain LL041_RS16075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS16075 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS16080 PF00544 Pectate lyase LL041_RS16115 PF02872 5'-nucleotidase, C-terminal domain LL041_RS16115 PF00149 Calcineurin-like phosphoesterase LL041_RS16115 PF17936 Bacterial Ig domain LL041_RS16120 PF00583 Acetyltransferase (GNAT) family LL041_RS16135 PF00005 ABC transporter LL041_RS16155 PF13089 Polyphosphate kinase N-terminal domain LL041_RS16155 PF17941 Polyphosphate kinase C-terminal domain 1 LL041_RS16155 PF13090 Polyphosphate kinase C-terminal domain 2 LL041_RS16155 PF02503 Polyphosphate kinase middle domain LL041_RS16165 PF00293 NUDIX domain LL041_RS16165 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS16170 PF12849 PBP superfamily domain LL041_RS16175 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS16180 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS16185 PF00005 ABC transporter LL041_RS16190 PF01384 Phosphate transporter family LL041_RS16200 PF02583 Metal-sensitive transcriptional repressor LL041_RS16220 PF01569 PAP2 superfamily LL041_RS16225 PF00877 NlpC/P60 family LL041_RS16225 PF01476 LysM domain LL041_RS16225 PF08239 Bacterial SH3 domain LL041_RS16230 PF00069 Protein kinase domain LL041_RS16230 PF00400 WD domain, G-beta repeat LL041_RS16270 PF00005 ABC transporter LL041_RS16280 PF07730 Histidine kinase LL041_RS16285 PF00196 Bacterial regulatory proteins, luxR family LL041_RS16285 PF00072 Response regulator receiver domain LL041_RS16305 PF01047 MarR family LL041_RS16315 PF08448 PAS fold LL041_RS16315 PF13581 Histidine kinase-like ATPase domain LL041_RS16315 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS16315 PF13466 STAS domain LL041_RS16320 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS16340 PF01266 FAD dependent oxidoreductase LL041_RS16345 PF02390 Putative methyltransferase LL041_RS16365 PF01872 RibD C-terminal domain LL041_RS16365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LL041_RS16370 PF00196 Bacterial regulatory proteins, luxR family LL041_RS16370 PF00072 Response regulator receiver domain LL041_RS16375 PF05231 MASE1 LL041_RS16375 PF07730 Histidine kinase LL041_RS16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS16390 PF00270 DEAD/DEAH box helicase LL041_RS16390 PF00271 Helicase conserved C-terminal domain LL041_RS16425 PF11898 Domain of unknown function (DUF3418) LL041_RS16425 PF00270 DEAD/DEAH box helicase LL041_RS16425 PF04408 Helicase associated domain (HA2) LL041_RS16425 PF00271 Helicase conserved C-terminal domain LL041_RS16425 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LL041_RS16445 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LL041_RS16445 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LL041_RS16455 PF00586 AIR synthase related protein, N-terminal domain LL041_RS16455 PF02769 AIR synthase related protein, C-terminal domain LL041_RS16460 PF00156 Phosphoribosyl transferase domain LL041_RS16475 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LL041_RS16475 PF00586 AIR synthase related protein, N-terminal domain LL041_RS16475 PF02769 AIR synthase related protein, C-terminal domain LL041_RS16485 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LL041_RS16490 PF11774 Lsr2 LL041_RS16505 PF13732 Domain of unknown function (DUF4162) LL041_RS16505 PF00005 ABC transporter LL041_RS16520 PF00196 Bacterial regulatory proteins, luxR family LL041_RS16530 PF01259 SAICAR synthetase LL041_RS16545 PF02844 Phosphoribosylglycinamide synthetase, N domain LL041_RS16545 PF02843 Phosphoribosylglycinamide synthetase, C domain LL041_RS16545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LL041_RS16550 PF12169 DNA polymerase III subunits gamma and tau domain III LL041_RS16675 PF17101 Stealth protein CR1, conserved region 1 LL041_RS16675 PF11380 Stealth protein CR2, conserved region 2 LL041_RS16675 PF17102 Stealth protein CR3, conserved region 3 LL041_RS16675 PF17103 Stealth protein CR4, conserved region 4 LL041_RS16680 PF17102 Stealth protein CR3, conserved region 3 LL041_RS16680 PF11380 Stealth protein CR2, conserved region 2 LL041_RS16680 PF17101 Stealth protein CR1, conserved region 1 LL041_RS16680 PF17103 Stealth protein CR4, conserved region 4 LL041_RS16705 PF01804 Penicillin amidase LL041_RS16740 PF14437 MafB19-like deaminase LL041_RS16755 PF14659 Phage integrase, N-terminal SAM-like domain LL041_RS16755 PF00589 Phage integrase family LL041_RS16760 PF12728 Helix-turn-helix domain LL041_RS16830 PF07876 Stress responsive A/B Barrel Domain LL041_RS16835 PF04542 Sigma-70 region 2 LL041_RS16835 PF04539 Sigma-70 region 3 LL041_RS16835 PF04545 Sigma-70, region 4 LL041_RS16840 PF04539 Sigma-70 region 3 LL041_RS16840 PF04545 Sigma-70, region 4 LL041_RS16840 PF04542 Sigma-70 region 2 LL041_RS16850 PF01047 MarR family LL041_RS16855 PF07690 Major Facilitator Superfamily LL041_RS16875 PF01243 Pyridoxamine 5'-phosphate oxidase LL041_RS16880 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LL041_RS16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS16890 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS16890 PF00672 HAMP domain LL041_RS16895 PF00072 Response regulator receiver domain LL041_RS16895 PF00486 Transcriptional regulatory protein, C terminal LL041_RS16915 PF07885 Ion channel LL041_RS16915 PF02254 TrkA-N domain LL041_RS16945 PF00072 Response regulator receiver domain LL041_RS16950 PF13193 AMP-binding enzyme C-terminal domain LL041_RS16950 PF00501 AMP-binding enzyme LL041_RS16955 PF04542 Sigma-70 region 2 LL041_RS16955 PF08281 Sigma-70, region 4 LL041_RS16995 PF13180 PDZ domain LL041_RS17000 PF03009 Glycerophosphoryl diester phosphodiesterase family LL041_RS17010 PF07516 SecA Wing and Scaffold domain LL041_RS17010 PF01043 SecA preprotein cross-linking domain LL041_RS17010 PF07517 SecA DEAD-like domain LL041_RS17010 PF02810 SEC-C motif LL041_RS17025 PF05195 Aminopeptidase P, N-terminal domain LL041_RS17025 PF00557 Metallopeptidase family M24 LL041_RS17045 PF02630 SCO1/SenC LL041_RS17055 PF05425 Copper resistance protein D LL041_RS17060 PF04261 Dyp-type peroxidase family LL041_RS17065 PF01842 ACT domain LL041_RS17065 PF00800 Prephenate dehydratase LL041_RS17070 PF02403 Seryl-tRNA synthetase N-terminal domain LL041_RS17070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LL041_RS17085 PF00005 ABC transporter LL041_RS17095 PF00005 ABC transporter LL041_RS17100 PF00106 short chain dehydrogenase LL041_RS17100 PF00561 alpha/beta hydrolase fold LL041_RS17105 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family LL041_RS17115 PF00296 Luciferase-like monooxygenase LL041_RS17125 PF01551 Peptidase family M23 LL041_RS17130 PF00664 ABC transporter transmembrane region LL041_RS17130 PF00005 ABC transporter LL041_RS17135 PF02322 Cytochrome bd terminal oxidase subunit II LL041_RS17140 PF01654 Cytochrome bd terminal oxidase subunit I LL041_RS17145 PF00155 Aminotransferase class I and II LL041_RS17150 PF00356 Bacterial regulatory proteins, lacI family LL041_RS17150 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LL041_RS17155 PF00149 Calcineurin-like phosphoesterase LL041_RS17165 PF02342 TerD domain LL041_RS17170 PF01964 Radical SAM ThiC family LL041_RS17170 PF13667 ThiC-associated domain LL041_RS17190 PF17260 Family of unknown function (DUF5326) LL041_RS17195 PF07883 Cupin domain LL041_RS17200 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LL041_RS17205 PF01451 Low molecular weight phosphotyrosine protein phosphatase LL041_RS17210 PF01053 Cys/Met metabolism PLP-dependent enzyme LL041_RS17215 PF03466 LysR substrate binding domain LL041_RS17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS17235 PF07690 Major Facilitator Superfamily LL041_RS17250 PF00144 Beta-lactamase LL041_RS17260 PF03796 DnaB-like helicase C terminal domain LL041_RS17260 PF00772 DnaB-like helicase N terminal domain LL041_RS17270 PF03948 Ribosomal protein L9, C-terminal domain LL041_RS17270 PF01281 Ribosomal protein L9, N-terminal domain LL041_RS17275 PF01084 Ribosomal protein S18 LL041_RS17280 PF00436 Single-strand binding protein family LL041_RS17285 PF01250 Ribosomal protein S6 LL041_RS17310 PF00905 Penicillin binding protein transpeptidase domain LL041_RS17310 PF00912 Transglycosylase LL041_RS17320 PF01658 Myo-inositol-1-phosphate synthase LL041_RS17325 PF07690 Major Facilitator Superfamily LL041_RS17335 PF12627 Probable RNA and SrmB- binding site of polymerase A LL041_RS17335 PF13735 tRNA nucleotidyltransferase domain 2 putative LL041_RS17335 PF01743 Poly A polymerase head domain LL041_RS17350 PF03793 PASTA domain LL041_RS17350 PF00069 Protein kinase domain LL041_RS17355 PF04542 Sigma-70 region 2 LL041_RS17355 PF08281 Sigma-70, region 4 LL041_RS17365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS17370 PF00085 Thioredoxin LL041_RS17380 PF17762 HTH domain found in ParB protein LL041_RS17380 PF02195 ParB-like nuclease domain LL041_RS17385 PF13614 AAA domain LL041_RS17390 PF02527 rRNA small subunit methyltransferase G LL041_RS17400 PF02096 60Kd inner membrane protein LL041_RS17405 PF01809 Putative membrane protein insertion efficiency factor LL041_RS17410 PF00825 Ribonuclease P LL041_RS17415 PF00468 Ribosomal protein L34 LL041_RS17420 PF00308 Bacterial dnaA protein LL041_RS17420 PF08299 Bacterial dnaA protein helix-turn-helix LL041_RS17425 PF00712 DNA polymerase III beta subunit, N-terminal domain LL041_RS17425 PF02767 DNA polymerase III beta subunit, central domain LL041_RS17425 PF02768 DNA polymerase III beta subunit, C-terminal domain LL041_RS17430 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LL041_RS17430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LL041_RS17435 PF02463 RecF/RecN/SMC N terminal domain LL041_RS17440 PF05258 Dna[CI] antecedent, DciA LL041_RS17445 PF00204 DNA gyrase B LL041_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS17445 PF01751 Toprim domain LL041_RS17445 PF00986 DNA gyrase B subunit, carboxyl terminus LL041_RS17450 PF03989 DNA gyrase C-terminal domain, beta-propeller LL041_RS17450 PF00521 DNA gyrase/topoisomerase IV, subunit A LL041_RS17455 PF12089 Transmembrane domain of unknown function (DUF3566) LL041_RS17485 PF00069 Protein kinase domain LL041_RS17500 PF17258 Family of unknown function (DUF5324) LL041_RS17505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LL041_RS17510 PF01694 Rhomboid family LL041_RS17515 PF06781 Cell division protein CrgA LL041_RS17530 PF00117 Glutamine amidotransferase class-I LL041_RS17535 PF04203 Sortase domain LL041_RS17540 PF04203 Sortase domain LL041_RS17545 PF00069 Protein kinase domain LL041_RS17545 PF03793 PASTA domain LL041_RS17550 PF00905 Penicillin binding protein transpeptidase domain LL041_RS17555 PF01098 Cell cycle protein LL041_RS17565 PF16697 Inner membrane component of T3SS, cytoplasmic domain LL041_RS17570 PF12401 Protein of unknown function (DUF2662) LL041_RS17570 PF00498 FHA domain LL041_RS17580 PF00753 Metallo-beta-lactamase superfamily LL041_RS17580 PF00581 Rhodanese-like domain LL041_RS17590 PF01925 Sulfite exporter TauE/SafE LL041_RS17595 PF00085 Thioredoxin LL041_RS17600 PF02583 Metal-sensitive transcriptional repressor LL041_RS17610 PF02583 Metal-sensitive transcriptional repressor LL041_RS17625 PF00005 ABC transporter LL041_RS17625 PF12704 MacB-like periplasmic core domain LL041_RS17625 PF02687 FtsX-like permease family LL041_RS17635 PF00196 Bacterial regulatory proteins, luxR family LL041_RS17635 PF00072 Response regulator receiver domain LL041_RS17640 PF01370 NAD dependent epimerase/dehydratase family LL041_RS17645 PF03756 A-factor biosynthesis hotdog domain LL041_RS17650 PF00440 Bacterial regulatory proteins, tetR family LL041_RS17670 PF00175 Oxidoreductase NAD-binding domain LL041_RS17670 PF00970 Oxidoreductase FAD-binding domain LL041_RS17670 PF00111 2Fe-2S iron-sulfur cluster binding domain LL041_RS17675 PF01883 Iron-sulfur cluster assembly protein LL041_RS17680 PF05138 Phenylacetic acid catabolic protein LL041_RS17685 PF06243 Phenylacetic acid degradation B LL041_RS17690 PF05138 Phenylacetic acid catabolic protein LL041_RS17705 PF00588 SpoU rRNA Methylase family LL041_RS17715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS17715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS17715 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LL041_RS17720 PF18665 Tetracyclin repressor-like, C-terminal domain LL041_RS17720 PF00440 Bacterial regulatory proteins, tetR family LL041_RS17725 PF01037 Lrp/AsnC ligand binding domain LL041_RS17725 PF13404 AsnC-type helix-turn-helix domain LL041_RS17730 PF00676 Dehydrogenase E1 component LL041_RS17735 PF02780 Transketolase, C-terminal domain LL041_RS17735 PF02779 Transketolase, pyrimidine binding domain LL041_RS17740 PF00364 Biotin-requiring enzyme LL041_RS17740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LL041_RS17740 PF02817 e3 binding domain LL041_RS17745 PF12804 MobA-like NTP transferase domain LL041_RS17750 PF03453 MoeA N-terminal region (domain I and II) LL041_RS17750 PF03454 MoeA C-terminal region (domain IV) LL041_RS17750 PF00994 Probable molybdopterin binding domain LL041_RS17760 PF01061 ABC-2 type transporter LL041_RS17765 PF13732 Domain of unknown function (DUF4162) LL041_RS17765 PF00005 ABC transporter LL041_RS17770 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS17770 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS17770 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS17770 PF08659 KR domain LL041_RS17770 PF00550 Phosphopantetheine attachment site LL041_RS17770 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS17770 PF00698 Acyl transferase domain LL041_RS17770 PF14765 Polyketide synthase dehydratase LL041_RS17780 PF10759 Protein of unknown function (DUF2587) LL041_RS17785 PF00069 Protein kinase domain LL041_RS17785 PF03793 PASTA domain LL041_RS17790 PF03793 PASTA domain LL041_RS17790 PF00069 Protein kinase domain LL041_RS17795 PF00676 Dehydrogenase E1 component LL041_RS17800 PF02780 Transketolase, C-terminal domain LL041_RS17800 PF02779 Transketolase, pyrimidine binding domain LL041_RS17805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LL041_RS17805 PF02817 e3 binding domain LL041_RS17805 PF00364 Biotin-requiring enzyme LL041_RS17815 PF00768 D-alanyl-D-alanine carboxypeptidase LL041_RS17820 PF07729 FCD domain LL041_RS17820 PF00392 Bacterial regulatory proteins, gntR family LL041_RS17835 PF00795 Carbon-nitrogen hydrolase LL041_RS17850 PF02127 Aminopeptidase I zinc metalloprotease (M18) LL041_RS17855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS17855 PF12806 Acetyl-CoA dehydrogenase C-terminal like LL041_RS17855 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS17855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS17865 PF02678 Pirin LL041_RS17865 PF05726 Pirin C-terminal cupin domain LL041_RS17875 PF02938 GAD domain LL041_RS17875 PF00152 tRNA synthetases class II (D, K and N) LL041_RS17875 PF01336 OB-fold nucleic acid binding domain LL041_RS17890 PF08000 Bacterial PH domain LL041_RS17895 PF09334 tRNA synthetases class I (M) LL041_RS17895 PF08264 Anticodon-binding domain of tRNA LL041_RS17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS17910 PF03466 LysR substrate binding domain LL041_RS17915 PF02031 Streptomyces extracellular neutral proteinase (M7) family LL041_RS17965 PF00128 Alpha amylase, catalytic domain LL041_RS17985 PF00067 Cytochrome P450 LL041_RS18000 PF00313 'Cold-shock' DNA-binding domain LL041_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS18010 PF03466 LysR substrate binding domain LL041_RS18015 PF00905 Penicillin binding protein transpeptidase domain LL041_RS18030 PF13407 Periplasmic binding protein domain LL041_RS18040 PF01757 Acyltransferase family LL041_RS18045 PF12680 SnoaL-like domain LL041_RS18045 PF08281 Sigma-70, region 4 LL041_RS18045 PF04542 Sigma-70 region 2 LL041_RS18050 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS18060 PF01522 Polysaccharide deacetylase LL041_RS18065 PF18389 TrmO C-terminal domain LL041_RS18065 PF01980 tRNA-methyltransferase O LL041_RS18075 PF01964 Radical SAM ThiC family LL041_RS18085 PF01566 Natural resistance-associated macrophage protein LL041_RS18085 PF03358 NADPH-dependent FMN reductase LL041_RS18095 PF05532 CsbD-like LL041_RS18100 PF02342 TerD domain LL041_RS18105 PF02342 TerD domain LL041_RS18110 PF04226 Transglycosylase associated protein LL041_RS18115 PF13411 MerR HTH family regulatory protein LL041_RS18115 PF07739 TipAS antibiotic-recognition domain LL041_RS18120 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LL041_RS18120 PF03033 Glycosyltransferase family 28 N-terminal domain LL041_RS18130 PF00486 Transcriptional regulatory protein, C terminal LL041_RS18130 PF00931 NB-ARC domain LL041_RS18130 PF03704 Bacterial transcriptional activator domain LL041_RS18145 PF00196 Bacterial regulatory proteins, luxR family LL041_RS18150 PF16363 GDP-mannose 4,6 dehydratase LL041_RS18160 PF00535 Glycosyl transferase family 2 LL041_RS18185 PF00999 Sodium/hydrogen exchanger family LL041_RS18190 PF16363 GDP-mannose 4,6 dehydratase LL041_RS18220 PF00196 Bacterial regulatory proteins, luxR family LL041_RS18220 PF00072 Response regulator receiver domain LL041_RS18225 PF07730 Histidine kinase LL041_RS18245 PF02585 GlcNAc-PI de-N-acetylase LL041_RS18250 PF01402 Ribbon-helix-helix protein, copG family LL041_RS18255 PF01850 PIN domain LL041_RS18275 PF09957 Bacterial antitoxin of type II TA system, VapB LL041_RS18315 PF00487 Fatty acid desaturase LL041_RS18325 PF13581 Histidine kinase-like ATPase domain LL041_RS18325 PF13466 STAS domain LL041_RS18325 PF08448 PAS fold LL041_RS18325 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS18390 PF12728 Helix-turn-helix domain LL041_RS18395 PF00589 Phage integrase family LL041_RS18395 PF14659 Phage integrase, N-terminal SAM-like domain LL041_RS18420 PF00692 dUTPase LL041_RS18425 PF00156 Phosphoribosyl transferase domain LL041_RS18445 PF13183 4Fe-4S dicluster domain LL041_RS18445 PF02754 Cysteine-rich domain LL041_RS18450 PF00953 Glycosyl transferase family 4 LL041_RS18455 PF00012 Hsp70 protein LL041_RS18460 PF01025 GrpE LL041_RS18465 PF00226 DnaJ domain LL041_RS18465 PF01556 DnaJ C terminal domain LL041_RS18465 PF00684 DnaJ central domain LL041_RS18470 PF13411 MerR HTH family regulatory protein LL041_RS18475 PF13407 Periplasmic binding protein domain LL041_RS18505 PF02861 Clp amino terminal domain, pathogenicity island component LL041_RS18505 PF17871 AAA lid domain LL041_RS18505 PF10431 C-terminal, D2-small domain, of ClpB protein LL041_RS18505 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS18505 PF07724 AAA domain (Cdc48 subfamily) LL041_RS18530 PF00155 Aminotransferase class I and II LL041_RS18550 PF01263 Aldose 1-epimerase LL041_RS18555 PF00156 Phosphoribosyl transferase domain LL041_RS18560 PF01116 Fructose-bisphosphate aldolase class-II LL041_RS18565 PF07690 Major Facilitator Superfamily LL041_RS18575 PF03301 Tryptophan 2,3-dioxygenase LL041_RS18580 PF00266 Aminotransferase class-V LL041_RS18600 PF07730 Histidine kinase LL041_RS18605 PF00072 Response regulator receiver domain LL041_RS18605 PF00196 Bacterial regulatory proteins, luxR family LL041_RS18610 PF07730 Histidine kinase LL041_RS18615 PF00072 Response regulator receiver domain LL041_RS18615 PF00196 Bacterial regulatory proteins, luxR family LL041_RS18620 PF00067 Cytochrome P450 LL041_RS18630 PF00005 ABC transporter LL041_RS18630 PF13732 Domain of unknown function (DUF4162) LL041_RS18650 PF00709 Adenylosuccinate synthetase LL041_RS18665 PF00392 Bacterial regulatory proteins, gntR family LL041_RS18665 PF07729 FCD domain LL041_RS18670 PF00202 Aminotransferase class-III LL041_RS18675 PF01965 DJ-1/PfpI family LL041_RS18685 PF13360 PQQ-like domain LL041_RS18685 PF00069 Protein kinase domain LL041_RS18685 PF01011 PQQ enzyme repeat LL041_RS18685 PF13570 PQQ-like domain LL041_RS18690 PF12849 PBP superfamily domain LL041_RS18700 PF02575 YbaB/EbfC DNA-binding family LL041_RS18705 PF00633 Helix-hairpin-helix motif LL041_RS18705 PF02132 RecR protein LL041_RS18705 PF13662 Toprim domain LL041_RS18715 PF05973 Phage derived protein Gp49-like (DUF891) LL041_RS18720 PF13744 Helix-turn-helix domain LL041_RS18725 PF01551 Peptidase family M23 LL041_RS18730 PF13840 ACT domain LL041_RS18730 PF00696 Amino acid kinase family LL041_RS18730 PF01842 ACT domain LL041_RS18735 PF01118 Semialdehyde dehydrogenase, NAD binding domain LL041_RS18735 PF02774 Semialdehyde dehydrogenase, dimerisation domain LL041_RS18740 PF08281 Sigma-70, region 4 LL041_RS18740 PF04542 Sigma-70 region 2 LL041_RS18755 PF00326 Prolyl oligopeptidase family LL041_RS18765 PF03773 Predicted permease LL041_RS18790 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS18790 PF00107 Zinc-binding dehydrogenase LL041_RS18790 PF08659 KR domain LL041_RS18790 PF00698 Acyl transferase domain LL041_RS18790 PF00550 Phosphopantetheine attachment site LL041_RS18790 PF14765 Polyketide synthase dehydratase LL041_RS18790 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS18790 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS18790 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS18805 PF03704 Bacterial transcriptional activator domain LL041_RS18805 PF00931 NB-ARC domain LL041_RS18805 PF00486 Transcriptional regulatory protein, C terminal LL041_RS18845 PF04235 Protein of unknown function (DUF418) LL041_RS18845 PF07786 Protein of unknown function (DUF1624) LL041_RS18900 PF04545 Sigma-70, region 4 LL041_RS18900 PF04542 Sigma-70 region 2 LL041_RS18930 PF01425 Amidase LL041_RS18960 PF00665 Integrase core domain LL041_RS18985 PF00149 Calcineurin-like phosphoesterase LL041_RS18985 PF10518 TAT (twin-arginine translocation) pathway signal sequence LL041_RS19025 PF00912 Transglycosylase LL041_RS19025 PF00905 Penicillin binding protein transpeptidase domain LL041_RS19030 PF02467 Transcription factor WhiB LL041_RS19035 PF17886 HSP20-like domain found in ArsA LL041_RS19035 PF02374 Anion-transporting ATPase LL041_RS19040 PF02374 Anion-transporting ATPase LL041_RS19060 PF00753 Metallo-beta-lactamase superfamily LL041_RS19060 PF16123 Hydroxyacylglutathione hydrolase C-terminus LL041_RS19065 PF00027 Cyclic nucleotide-binding domain LL041_RS19065 PF13545 Crp-like helix-turn-helix domain LL041_RS19070 PF10576 Iron-sulfur binding domain of endonuclease III LL041_RS19070 PF00730 HhH-GPD superfamily base excision DNA repair protein LL041_RS19070 PF00633 Helix-hairpin-helix motif LL041_RS19075 PF00293 NUDIX domain LL041_RS19080 PF02674 Colicin V production protein LL041_RS19090 PF00561 alpha/beta hydrolase fold LL041_RS19100 PF06965 Na+/H+ antiporter 1 LL041_RS19105 PF13193 AMP-binding enzyme C-terminal domain LL041_RS19105 PF00501 AMP-binding enzyme LL041_RS19105 PF16177 Acetyl-coenzyme A synthetase N-terminus LL041_RS19110 PF00484 Carbonic anhydrase LL041_RS19140 PF00437 Type II/IV secretion system protein LL041_RS19170 PF00271 Helicase conserved C-terminal domain LL041_RS19170 PF09369 Domain of unknown function (DUF1998) LL041_RS19170 PF00270 DEAD/DEAH box helicase LL041_RS19175 PF01740 STAS domain LL041_RS19180 PF13581 Histidine kinase-like ATPase domain LL041_RS19185 PF03030 Inorganic H+ pyrophosphatase LL041_RS19205 PF01751 Toprim domain LL041_RS19205 PF13368 Topoisomerase C-terminal repeat LL041_RS19205 PF01131 DNA topoisomerase LL041_RS19210 PF02223 Thymidylate kinase LL041_RS19220 PF00561 alpha/beta hydrolase fold LL041_RS19245 PF00476 DNA polymerase family A LL041_RS19245 PF01612 3'-5' exonuclease LL041_RS19245 PF01367 5'-3' exonuclease, C-terminal SAM fold LL041_RS19245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LL041_RS19250 PF02861 Clp amino terminal domain, pathogenicity island component LL041_RS19285 PF00171 Aldehyde dehydrogenase family LL041_RS19295 PF13732 Domain of unknown function (DUF4162) LL041_RS19295 PF00005 ABC transporter LL041_RS19300 PF01061 ABC-2 type transporter LL041_RS19305 PF00654 Voltage gated chloride channel LL041_RS19310 PF07739 TipAS antibiotic-recognition domain LL041_RS19310 PF13411 MerR HTH family regulatory protein LL041_RS19315 PF09335 SNARE associated Golgi protein LL041_RS19325 PF00719 Inorganic pyrophosphatase LL041_RS19330 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LL041_RS19340 PF09179 TilS substrate binding domain LL041_RS19340 PF01171 PP-loop family LL041_RS19345 PF00156 Phosphoribosyl transferase domain LL041_RS19350 PF01434 Peptidase family M41 LL041_RS19350 PF06480 FtsH Extracellular LL041_RS19350 PF17862 AAA+ lid domain LL041_RS19350 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS19355 PF01227 GTP cyclohydrolase I LL041_RS19365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LL041_RS19370 PF02152 Dihydroneopterin aldolase LL041_RS19380 PF00809 Pterin binding enzyme LL041_RS19400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LL041_RS19410 PF07730 Histidine kinase LL041_RS19410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS19410 PF05384 Sensor protein DegS LL041_RS19415 PF00072 Response regulator receiver domain LL041_RS19415 PF00196 Bacterial regulatory proteins, luxR family LL041_RS19440 PF02569 Pantoate-beta-alanine ligase LL041_RS19445 PF02910 Fumarate reductase flavoprotein C-term LL041_RS19445 PF00890 FAD binding domain LL041_RS19450 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LL041_RS19450 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LL041_RS19455 PF03309 Type III pantothenate kinase LL041_RS19475 PF00583 Acetyltransferase (GNAT) family LL041_RS19480 PF11774 Lsr2 LL041_RS19490 PF10431 C-terminal, D2-small domain, of ClpB protein LL041_RS19490 PF02861 Clp amino terminal domain, pathogenicity island component LL041_RS19490 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS19490 PF07724 AAA domain (Cdc48 subfamily) LL041_RS19490 PF17871 AAA lid domain LL041_RS19500 PF01476 LysM domain LL041_RS19500 PF08525 Opacity-associated protein A N-terminal motif LL041_RS19500 PF01551 Peptidase family M23 LL041_RS19505 PF08361 MAATS-type transcriptional repressor, C-terminal region LL041_RS19505 PF00440 Bacterial regulatory proteins, tetR family LL041_RS19510 PF07690 Major Facilitator Superfamily LL041_RS19515 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS19515 PF00672 HAMP domain LL041_RS19515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS19520 PF00486 Transcriptional regulatory protein, C terminal LL041_RS19520 PF00072 Response regulator receiver domain LL041_RS19530 PF04542 Sigma-70 region 2 LL041_RS19530 PF08281 Sigma-70, region 4 LL041_RS19535 PF00633 Helix-hairpin-helix motif LL041_RS19535 PF00730 HhH-GPD superfamily base excision DNA repair protein LL041_RS19535 PF10576 Iron-sulfur binding domain of endonuclease III LL041_RS19545 PF00196 Bacterial regulatory proteins, luxR family LL041_RS19545 PF00072 Response regulator receiver domain LL041_RS19550 PF01569 PAP2 superfamily LL041_RS19560 PF12826 Helix-hairpin-helix motif LL041_RS19560 PF10635 DisA bacterial checkpoint controller linker region LL041_RS19560 PF02457 DisA bacterial checkpoint controller nucleotide-binding LL041_RS19565 PF18073 Rubredoxin metal binding domain LL041_RS19580 PF02541 Ppx/GppA phosphatase family LL041_RS19585 PF01261 Xylose isomerase-like TIM barrel LL041_RS19590 PF00440 Bacterial regulatory proteins, tetR family LL041_RS19595 PF00920 Dehydratase family LL041_RS19600 PF00400 WD domain, G-beta repeat LL041_RS19600 PF00069 Protein kinase domain LL041_RS19615 PF08241 Methyltransferase domain LL041_RS19620 PF00005 ABC transporter LL041_RS19630 PF14748 Pyrroline-5-carboxylate reductase dimerisation LL041_RS19630 PF03807 NADP oxidoreductase coenzyme F420-dependent LL041_RS19635 PF00857 Isochorismatase family LL041_RS19640 PF12833 Helix-turn-helix domain LL041_RS19640 PF01965 DJ-1/PfpI family LL041_RS19645 PF00579 tRNA synthetases class I (W and Y) LL041_RS19675 PF00850 Histone deacetylase domain LL041_RS19685 PF12728 Helix-turn-helix domain LL041_RS19695 PF01370 NAD dependent epimerase/dehydratase family LL041_RS19700 PF01553 Acyltransferase LL041_RS19710 PF08281 Sigma-70, region 4 LL041_RS19710 PF04542 Sigma-70 region 2 LL041_RS19725 PF05768 Glutaredoxin-like domain (DUF836) LL041_RS19730 PF06971 Putative DNA-binding protein N-terminus LL041_RS19730 PF02629 CoA binding domain LL041_RS19735 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LL041_RS19735 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LL041_RS19735 PF01488 Shikimate / quinate 5-dehydrogenase LL041_RS19740 PF03900 Porphobilinogen deaminase, C-terminal domain LL041_RS19740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LL041_RS19745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL041_RS19745 PF14824 Sirohaem biosynthesis protein central LL041_RS19745 PF10414 Sirohaem synthase dimerisation region LL041_RS19810 PF00490 Delta-aminolevulinic acid dehydratase LL041_RS19825 PF00083 Sugar (and other) transporter LL041_RS19830 PF04909 Amidohydrolase LL041_RS19835 PF04909 Amidohydrolase LL041_RS19840 PF00072 Response regulator receiver domain LL041_RS19840 PF00486 Transcriptional regulatory protein, C terminal LL041_RS19845 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS19845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS19845 PF00672 HAMP domain LL041_RS19860 PF00155 Aminotransferase class I and II LL041_RS19865 PF00750 tRNA synthetases class I (R) LL041_RS19865 PF03485 Arginyl tRNA synthetase N terminal domain LL041_RS19865 PF05746 DALR anticodon binding domain LL041_RS19870 PF01921 tRNA synthetases class I (K) LL041_RS19890 PF01139 tRNA-splicing ligase RtcB LL041_RS19895 PF00106 short chain dehydrogenase LL041_RS19900 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LL041_RS19905 PF01047 MarR family LL041_RS19910 PF00296 Luciferase-like monooxygenase LL041_RS19915 PF03358 NADPH-dependent FMN reductase LL041_RS19920 PF00486 Transcriptional regulatory protein, C terminal LL041_RS19920 PF00072 Response regulator receiver domain LL041_RS19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS19925 PF00672 HAMP domain LL041_RS19925 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS19930 PF01546 Peptidase family M20/M25/M40 LL041_RS19930 PF07687 Peptidase dimerisation domain LL041_RS19935 PF00188 Cysteine-rich secretory protein family LL041_RS19960 PF00005 ABC transporter LL041_RS19960 PF13732 Domain of unknown function (DUF4162) LL041_RS19965 PF01061 ABC-2 type transporter LL041_RS19970 PF00196 Bacterial regulatory proteins, luxR family LL041_RS19970 PF00072 Response regulator receiver domain LL041_RS19975 PF07730 Histidine kinase LL041_RS19990 PF00202 Aminotransferase class-III LL041_RS19995 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS20005 PF00578 AhpC/TSA family LL041_RS20010 PF02683 Cytochrome C biogenesis protein transmembrane region LL041_RS20015 PF05140 ResB-like family LL041_RS20020 PF01578 Cytochrome C assembly protein LL041_RS20025 PF00400 WD domain, G-beta repeat LL041_RS20025 PF00069 Protein kinase domain LL041_RS20030 PF00069 Protein kinase domain LL041_RS20030 PF00400 WD domain, G-beta repeat LL041_RS20045 PF00069 Protein kinase domain LL041_RS20045 PF00400 WD domain, G-beta repeat LL041_RS20055 PF00069 Protein kinase domain LL041_RS20055 PF00400 WD domain, G-beta repeat LL041_RS20065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LL041_RS20070 PF01040 UbiA prenyltransferase family LL041_RS20080 PF02441 Flavoprotein LL041_RS20090 PF04055 Radical SAM superfamily LL041_RS20105 PF00375 Sodium:dicarboxylate symporter family LL041_RS20135 PF00440 Bacterial regulatory proteins, tetR family LL041_RS20135 PF13977 BetI-type transcriptional repressor, C-terminal LL041_RS20150 PF02803 Thiolase, C-terminal domain LL041_RS20150 PF00108 Thiolase, N-terminal domain LL041_RS20155 PF00501 AMP-binding enzyme LL041_RS20160 PF00313 'Cold-shock' DNA-binding domain LL041_RS20165 PF02621 Menaquinone biosynthesis LL041_RS20170 PF00069 Protein kinase domain LL041_RS20170 PF00400 WD domain, G-beta repeat LL041_RS20175 PF01580 FtsK/SpoIIIE family LL041_RS20250 PF00437 Type II/IV secretion system protein LL041_RS20300 PF04055 Radical SAM superfamily LL041_RS20310 PF02839 Carbohydrate binding domain LL041_RS20320 PF00535 Glycosyl transferase family 2 LL041_RS20330 PF01209 ubiE/COQ5 methyltransferase family LL041_RS20345 PF01494 FAD binding domain LL041_RS20350 PF08239 Bacterial SH3 domain LL041_RS20350 PF00877 NlpC/P60 family LL041_RS20350 PF01476 LysM domain LL041_RS20355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LL041_RS20360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LL041_RS20365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LL041_RS20370 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LL041_RS20380 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LL041_RS20380 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LL041_RS20380 PF10531 SLBB domain LL041_RS20385 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LL041_RS20385 PF01568 Molydopterin dinucleotide binding domain LL041_RS20385 PF00384 Molybdopterin oxidoreductase LL041_RS20385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LL041_RS20390 PF00146 NADH dehydrogenase LL041_RS20395 PF12838 4Fe-4S dicluster domain LL041_RS20400 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LL041_RS20405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LL041_RS20410 PF00361 Proton-conducting membrane transporter LL041_RS20410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LL041_RS20415 PF00361 Proton-conducting membrane transporter LL041_RS20420 PF00361 Proton-conducting membrane transporter LL041_RS20425 PF00270 DEAD/DEAH box helicase LL041_RS20425 PF00271 Helicase conserved C-terminal domain LL041_RS20425 PF00570 HRDC domain LL041_RS20425 PF16124 RecQ zinc-binding LL041_RS20425 PF09382 RQC domain LL041_RS20440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LL041_RS20490 PF00348 Polyprenyl synthetase LL041_RS20500 PF00005 ABC transporter LL041_RS20515 PF03358 NADPH-dependent FMN reductase LL041_RS20520 PF01425 Amidase LL041_RS20535 PF00115 Cytochrome C and Quinol oxidase polypeptide I LL041_RS20555 PF00892 EamA-like transporter family LL041_RS20565 PF00486 Transcriptional regulatory protein, C terminal LL041_RS20565 PF03704 Bacterial transcriptional activator domain LL041_RS20565 PF00931 NB-ARC domain LL041_RS20570 PF05368 NmrA-like family LL041_RS20575 PF01638 HxlR-like helix-turn-helix LL041_RS20580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS20585 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LL041_RS20585 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LL041_RS20585 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LL041_RS20590 PF00196 Bacterial regulatory proteins, luxR family LL041_RS20590 PF00072 Response regulator receiver domain LL041_RS20605 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LL041_RS20610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LL041_RS20615 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LL041_RS20620 PF00146 NADH dehydrogenase LL041_RS20625 PF00037 4Fe-4S binding domain LL041_RS20630 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LL041_RS20635 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LL041_RS20640 PF00361 Proton-conducting membrane transporter LL041_RS20640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LL041_RS20645 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LL041_RS20645 PF00361 Proton-conducting membrane transporter LL041_RS20650 PF00361 Proton-conducting membrane transporter LL041_RS20655 PF01435 Peptidase family M48 LL041_RS20660 PF03733 Inner membrane component domain LL041_RS20670 PF13520 Amino acid permease LL041_RS20675 PF04226 Transglycosylase associated protein LL041_RS20680 PF04461 Protein of unknown function (DUF520) LL041_RS20755 PF00293 NUDIX domain LL041_RS20780 PF13460 NAD(P)H-binding LL041_RS20800 PF00471 Ribosomal protein L33 LL041_RS20805 PF13452 N-terminal half of MaoC dehydratase LL041_RS20815 PF01565 FAD binding domain LL041_RS20815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LL041_RS20820 PF00962 Adenosine/AMP deaminase LL041_RS20825 PF00155 Aminotransferase class I and II LL041_RS20835 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LL041_RS20840 PF02357 Transcription termination factor nusG LL041_RS20845 PF03946 Ribosomal protein L11, N-terminal domain LL041_RS20845 PF00298 Ribosomal protein L11, RNA binding domain LL041_RS20850 PF00687 Ribosomal protein L1p/L10e family LL041_RS20860 PF00466 Ribosomal protein L10 LL041_RS20865 PF00542 Ribosomal protein L7/L12 C-terminal domain LL041_RS20865 PF16320 Ribosomal protein L7/L12 dimerisation domain LL041_RS20870 PF00562 RNA polymerase Rpb2, domain 6 LL041_RS20870 PF10385 RNA polymerase beta subunit external 1 domain LL041_RS20870 PF04565 RNA polymerase Rpb2, domain 3 LL041_RS20870 PF04560 RNA polymerase Rpb2, domain 7 LL041_RS20870 PF04561 RNA polymerase Rpb2, domain 2 LL041_RS20870 PF04563 RNA polymerase beta subunit LL041_RS20875 PF04997 RNA polymerase Rpb1, domain 1 LL041_RS20875 PF00623 RNA polymerase Rpb1, domain 2 LL041_RS20875 PF04983 RNA polymerase Rpb1, domain 3 LL041_RS20875 PF05000 RNA polymerase Rpb1, domain 4 LL041_RS20875 PF04998 RNA polymerase Rpb1, domain 5 LL041_RS20885 PF00164 Ribosomal protein S12/S23 LL041_RS20890 PF00177 Ribosomal protein S7p/S5e LL041_RS20895 PF00009 Elongation factor Tu GTP binding domain LL041_RS20895 PF03144 Elongation factor Tu domain 2 LL041_RS20895 PF03764 Elongation factor G, domain IV LL041_RS20895 PF14492 Elongation Factor G, domain II LL041_RS20895 PF00679 Elongation factor G C-terminus LL041_RS20900 PF00009 Elongation factor Tu GTP binding domain LL041_RS20900 PF03144 Elongation factor Tu domain 2 LL041_RS20900 PF03143 Elongation factor Tu C-terminal domain LL041_RS20925 PF00248 Aldo/keto reductase family LL041_RS20940 PF00072 Response regulator receiver domain LL041_RS20940 PF00196 Bacterial regulatory proteins, luxR family LL041_RS20945 PF07730 Histidine kinase LL041_RS20950 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LL041_RS20950 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LL041_RS20995 PF00338 Ribosomal protein S10p/S20e LL041_RS21000 PF00297 Ribosomal protein L3 LL041_RS21005 PF00573 Ribosomal protein L4/L1 family LL041_RS21010 PF00276 Ribosomal protein L23 LL041_RS21015 PF00181 Ribosomal Proteins L2, RNA binding domain LL041_RS21015 PF03947 Ribosomal Proteins L2, C-terminal domain LL041_RS21020 PF00203 Ribosomal protein S19 LL041_RS21025 PF00237 Ribosomal protein L22p/L17e LL041_RS21030 PF07650 KH domain LL041_RS21030 PF00189 Ribosomal protein S3, C-terminal domain LL041_RS21035 PF00252 Ribosomal protein L16p/L10e LL041_RS21040 PF00831 Ribosomal L29 protein LL041_RS21045 PF00366 Ribosomal protein S17 LL041_RS21050 PF00238 Ribosomal protein L14p/L23e LL041_RS21055 PF00467 KOW motif LL041_RS21055 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LL041_RS21060 PF00281 Ribosomal protein L5 LL041_RS21060 PF00673 ribosomal L5P family C-terminus LL041_RS21065 PF00253 Ribosomal protein S14p/S29e LL041_RS21070 PF00410 Ribosomal protein S8 LL041_RS21075 PF00347 Ribosomal protein L6 LL041_RS21080 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LL041_RS21085 PF00333 Ribosomal protein S5, N-terminal domain LL041_RS21085 PF03719 Ribosomal protein S5, C-terminal domain LL041_RS21090 PF00327 Ribosomal protein L30p/L7e LL041_RS21095 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LL041_RS21100 PF00344 SecY translocase LL041_RS21105 PF05191 Adenylate kinase, active site lid LL041_RS21110 PF00557 Metallopeptidase family M24 LL041_RS21115 PF01176 Translation initiation factor 1A / IF-1 LL041_RS21120 PF00444 Ribosomal protein L36 LL041_RS21125 PF00416 Ribosomal protein S13/S18 LL041_RS21130 PF00411 Ribosomal protein S11 LL041_RS21135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LL041_RS21135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LL041_RS21135 PF01000 RNA polymerase Rpb3/RpoA insert domain LL041_RS21140 PF01196 Ribosomal protein L17 LL041_RS21145 PF01416 tRNA pseudouridine synthase LL041_RS21155 PF09587 Bacterial capsule synthesis protein PGA_cap LL041_RS21165 PF08245 Mur ligase middle domain LL041_RS21190 PF00572 Ribosomal protein L13 LL041_RS21195 PF00380 Ribosomal protein S9/S16 LL041_RS21200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LL041_RS21200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LL041_RS21200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LL041_RS21200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LL041_RS21210 PF00485 Phosphoribulokinase / Uridine kinase family LL041_RS21220 PF01380 SIS domain LL041_RS21225 PF01648 4'-phosphopantetheinyl transferase superfamily LL041_RS21230 PF04539 Sigma-70 region 3 LL041_RS21230 PF04545 Sigma-70, region 4 LL041_RS21230 PF04542 Sigma-70 region 2 LL041_RS21240 PF01256 Carbohydrate kinase LL041_RS21240 PF03853 YjeF-related protein N-terminus LL041_RS21245 PF01168 Alanine racemase, N-terminal domain LL041_RS21245 PF00842 Alanine racemase, C-terminal domain LL041_RS21250 PF00364 Biotin-requiring enzyme LL041_RS21250 PF00561 alpha/beta hydrolase fold LL041_RS21255 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LL041_RS21270 PF00814 Glycoprotease family LL041_RS21280 PF00814 Glycoprotease family LL041_RS21300 PF00356 Bacterial regulatory proteins, lacI family LL041_RS21305 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS21305 PF13399 LytR cell envelope-related transcriptional attenuator LL041_RS21315 PF08281 Sigma-70, region 4 LL041_RS21315 PF04542 Sigma-70 region 2 LL041_RS21320 PF18096 THUMP domain-like LL041_RS21325 PF01522 Polysaccharide deacetylase LL041_RS21330 PF01522 Polysaccharide deacetylase LL041_RS21335 PF00166 Chaperonin 10 Kd subunit LL041_RS21340 PF00118 TCP-1/cpn60 chaperonin family LL041_RS21395 PF00106 short chain dehydrogenase LL041_RS21405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS21405 PF03466 LysR substrate binding domain LL041_RS21410 PF02467 Transcription factor WhiB LL041_RS21415 PF00196 Bacterial regulatory proteins, luxR family LL041_RS21415 PF00072 Response regulator receiver domain LL041_RS21420 PF04542 Sigma-70 region 2 LL041_RS21420 PF04545 Sigma-70, region 4 LL041_RS21425 PF00478 IMP dehydrogenase / GMP reductase domain LL041_RS21425 PF00571 CBS domain LL041_RS21430 PF00478 IMP dehydrogenase / GMP reductase domain LL041_RS21435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LL041_RS21435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LL041_RS21435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LL041_RS21440 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LL041_RS21440 PF01266 FAD dependent oxidoreductase LL041_RS21445 PF00144 Beta-lactamase LL041_RS21450 PF00069 Protein kinase domain LL041_RS21450 PF03793 PASTA domain LL041_RS21455 PF00400 WD domain, G-beta repeat LL041_RS21455 PF00069 Protein kinase domain LL041_RS21460 PF00069 Protein kinase domain LL041_RS21465 PF00069 Protein kinase domain LL041_RS21470 PF00069 Protein kinase domain LL041_RS21475 PF00171 Aldehyde dehydrogenase family LL041_RS21480 PF05199 GMC oxidoreductase LL041_RS21500 PF00117 Glutamine amidotransferase class-I LL041_RS21500 PF00958 GMP synthase C terminal domain LL041_RS21500 PF02540 NAD synthase LL041_RS21510 PF00596 Class II Aldolase and Adducin N-terminal domain LL041_RS21540 PF00072 Response regulator receiver domain LL041_RS21540 PF00196 Bacterial regulatory proteins, luxR family LL041_RS21550 PF00877 NlpC/P60 family LL041_RS21555 PF00580 UvrD/REP helicase N-terminal domain LL041_RS21555 PF13361 UvrD-like helicase C-terminal domain LL041_RS21560 PF01551 Peptidase family M23 LL041_RS21560 PF04225 Opacity-associated protein A LysM-like domain LL041_RS21570 PF01642 Methylmalonyl-CoA mutase LL041_RS21570 PF02310 B12 binding domain LL041_RS21585 PF07728 AAA domain (dynein-related subfamily) LL041_RS21595 PF05762 VWA domain containing CoxE-like protein LL041_RS21605 PF08442 ATP-grasp domain LL041_RS21605 PF00549 CoA-ligase LL041_RS21610 PF00549 CoA-ligase LL041_RS21610 PF02629 CoA binding domain LL041_RS21630 PF00551 Formyl transferase LL041_RS21635 PF02142 MGS-like domain LL041_RS21635 PF01808 AICARFT/IMPCHase bienzyme LL041_RS21655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LL041_RS21655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LL041_RS21670 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LL041_RS21670 PF00056 lactate/malate dehydrogenase, NAD binding domain LL041_RS21675 PF00171 Aldehyde dehydrogenase family LL041_RS21680 PF05199 GMC oxidoreductase LL041_RS21680 PF00732 GMC oxidoreductase LL041_RS21685 PF00571 CBS domain LL041_RS21685 PF00005 ABC transporter LL041_RS21690 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS21700 PF02627 Carboxymuconolactone decarboxylase family LL041_RS21710 PF00392 Bacterial regulatory proteins, gntR family LL041_RS21710 PF00155 Aminotransferase class I and II LL041_RS21720 PF03738 Glutathionylspermidine synthase preATP-grasp LL041_RS21725 PF00464 Serine hydroxymethyltransferase LL041_RS21735 PF00579 tRNA synthetases class I (W and Y) LL041_RS21745 PF00106 short chain dehydrogenase LL041_RS21750 PF01565 FAD binding domain LL041_RS21755 PF01569 PAP2 superfamily LL041_RS21760 PF01040 UbiA prenyltransferase family LL041_RS21770 PF03631 Virulence factor BrkB LL041_RS21775 PF00768 D-alanyl-D-alanine carboxypeptidase LL041_RS21785 PF00149 Calcineurin-like phosphoesterase LL041_RS21790 PF00440 Bacterial regulatory proteins, tetR family LL041_RS21805 PF13085 2Fe-2S iron-sulfur cluster binding domain LL041_RS21810 PF00890 FAD binding domain LL041_RS21810 PF02910 Fumarate reductase flavoprotein C-term LL041_RS21820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LL041_RS21830 PF07691 PA14 domain LL041_RS21830 PF02838 Glycosyl hydrolase family 20, domain 2 LL041_RS21830 PF00728 Glycosyl hydrolase family 20, catalytic domain LL041_RS21885 PF01642 Methylmalonyl-CoA mutase LL041_RS21885 PF02310 B12 binding domain LL041_RS21895 PF01810 LysE type translocator LL041_RS21915 PF00535 Glycosyl transferase family 2 LL041_RS21935 PF00535 Glycosyl transferase family 2 LL041_RS21945 PF02348 Cytidylyltransferase LL041_RS21950 PF03102 NeuB family LL041_RS21950 PF08666 SAF domain LL041_RS21960 PF04107 Glutamate-cysteine ligase family 2(GCS2) LL041_RS21960 PF01546 Peptidase family M20/M25/M40 LL041_RS21965 PF02608 ABC transporter substrate-binding protein PnrA-like LL041_RS21970 PF02608 ABC transporter substrate-binding protein PnrA-like LL041_RS21975 PF00005 ABC transporter LL041_RS21985 PF02653 Branched-chain amino acid transport system / permease component LL041_RS21990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LL041_RS21995 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LL041_RS21995 PF00591 Glycosyl transferase family, a/b domain LL041_RS21995 PF02885 Glycosyl transferase family, helical bundle domain LL041_RS22015 PF12680 SnoaL-like domain LL041_RS22015 PF08281 Sigma-70, region 4 LL041_RS22015 PF04542 Sigma-70 region 2 LL041_RS22020 PF07690 Major Facilitator Superfamily LL041_RS22025 PF03466 LysR substrate binding domain LL041_RS22025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS22035 PF00962 Adenosine/AMP deaminase LL041_RS22060 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS22060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS22060 PF00672 HAMP domain LL041_RS22065 PF00072 Response regulator receiver domain LL041_RS22065 PF00486 Transcriptional regulatory protein, C terminal LL041_RS22070 PF04542 Sigma-70 region 2 LL041_RS22070 PF08281 Sigma-70, region 4 LL041_RS22085 PF00171 Aldehyde dehydrogenase family LL041_RS22090 PF00171 Aldehyde dehydrogenase family LL041_RS22095 PF01791 DeoC/LacD family aldolase LL041_RS22105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LL041_RS22105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LL041_RS22105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LL041_RS22105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LL041_RS22110 PF01048 Phosphorylase superfamily LL041_RS22120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LL041_RS22120 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS22125 PF08220 DeoR-like helix-turn-helix domain LL041_RS22125 PF00455 DeoR C terminal sensor domain LL041_RS22130 PF02785 Biotin carboxylase C-terminal domain LL041_RS22130 PF00364 Biotin-requiring enzyme LL041_RS22130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL041_RS22130 PF00289 Biotin carboxylase, N-terminal domain LL041_RS22140 PF02545 Maf-like protein LL041_RS22150 PF01039 Carboxyl transferase domain LL041_RS22155 PF02237 Biotin protein ligase C terminal domain LL041_RS22155 PF03099 Biotin/lipoate A/B protein ligase family LL041_RS22155 PF08279 HTH domain LL041_RS22160 PF16701 Adenylate cyclase regulatory domain LL041_RS22160 PF00211 Adenylate and Guanylate cyclase catalytic domain LL041_RS22170 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS22175 PF00990 Diguanylate cyclase, GGDEF domain LL041_RS22180 PF00221 Aromatic amino acid lyase LL041_RS22195 PF03734 L,D-transpeptidase catalytic domain LL041_RS22195 PF17964 Bacterial Ig domain LL041_RS22205 PF00005 ABC transporter LL041_RS22210 PF00082 Subtilase family LL041_RS22210 PF05922 Peptidase inhibitor I9 LL041_RS22220 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS22220 PF00107 Zinc-binding dehydrogenase LL041_RS22230 PF13360 PQQ-like domain LL041_RS22230 PF00069 Protein kinase domain LL041_RS22240 PF01053 Cys/Met metabolism PLP-dependent enzyme LL041_RS22255 PF17864 RuvB AAA lid domain LL041_RS22255 PF05496 Holliday junction DNA helicase RuvB P-loop domain LL041_RS22255 PF05491 RuvB C-terminal winged helix domain LL041_RS22260 PF13291 ACT domain LL041_RS22260 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS22265 PF13732 Domain of unknown function (DUF4162) LL041_RS22265 PF00005 ABC transporter LL041_RS22270 PF01061 ABC-2 type transporter LL041_RS22275 PF01272 Transcription elongation factor, GreA/GreB, C-term LL041_RS22275 PF03449 Transcription elongation factor, N-terminal LL041_RS22285 PF02585 GlcNAc-PI de-N-acetylase LL041_RS22320 PF03190 Protein of unknown function, DUF255 LL041_RS22345 PF03190 Protein of unknown function, DUF255 LL041_RS22355 PF03006 Haemolysin-III related LL041_RS22360 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LL041_RS22360 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LL041_RS22385 PF01494 FAD binding domain LL041_RS22485 PF00561 alpha/beta hydrolase fold LL041_RS22490 PF10502 Signal peptidase, peptidase S26 LL041_RS22575 PF00155 Aminotransferase class I and II LL041_RS22590 PF07969 Amidohydrolase family LL041_RS22605 PF09339 IclR helix-turn-helix domain LL041_RS22605 PF01614 Bacterial transcriptional regulator LL041_RS22610 PF01042 Endoribonuclease L-PSP LL041_RS22615 PF02447 GntP family permease LL041_RS22625 PF00246 Zinc carboxypeptidase LL041_RS22635 PF00704 Glycosyl hydrolases family 18 LL041_RS22635 PF02018 Carbohydrate binding domain LL041_RS22635 PF00041 Fibronectin type III domain LL041_RS22650 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LL041_RS22665 PF00437 Type II/IV secretion system protein LL041_RS22685 PF00072 Response regulator receiver domain LL041_RS22685 PF00196 Bacterial regulatory proteins, luxR family LL041_RS22750 PF08241 Methyltransferase domain LL041_RS22755 PF01255 Putative undecaprenyl diphosphate synthase LL041_RS22770 PF01594 AI-2E family transporter LL041_RS22775 PF02627 Carboxymuconolactone decarboxylase family LL041_RS22780 PF00578 AhpC/TSA family LL041_RS22785 PF03466 LysR substrate binding domain LL041_RS22785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS22795 PF00005 ABC transporter LL041_RS22815 PF00912 Transglycosylase LL041_RS22815 PF00905 Penicillin binding protein transpeptidase domain LL041_RS22830 PF10415 Fumarase C C-terminus LL041_RS22830 PF00206 Lyase LL041_RS22835 PF02868 Thermolysin metallopeptidase, alpha-helical domain LL041_RS22835 PF04389 Peptidase family M28 LL041_RS22835 PF01447 Thermolysin metallopeptidase, catalytic domain LL041_RS22850 PF00067 Cytochrome P450 LL041_RS22860 PF00550 Phosphopantetheine attachment site LL041_RS22860 PF13193 AMP-binding enzyme C-terminal domain LL041_RS22860 PF00501 AMP-binding enzyme LL041_RS22865 PF01209 ubiE/COQ5 methyltransferase family LL041_RS22875 PF00067 Cytochrome P450 LL041_RS22880 PF05681 Fumarate hydratase (Fumerase) LL041_RS22880 PF05683 Fumarase C-terminus LL041_RS22890 PF02467 Transcription factor WhiB LL041_RS22895 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LL041_RS22905 PF00881 Nitroreductase family LL041_RS22910 PF02609 Exonuclease VII small subunit LL041_RS22915 PF02601 Exonuclease VII, large subunit LL041_RS22915 PF13742 OB-fold nucleic acid binding domain LL041_RS22920 PF02401 LytB protein LL041_RS22925 PF00480 ROK family LL041_RS22935 PF01926 50S ribosome-binding GTPase LL041_RS22935 PF06071 Protein of unknown function (DUF933) LL041_RS22965 PF08678 Rsbr N terminal LL041_RS22965 PF01740 STAS domain LL041_RS22970 PF01740 STAS domain LL041_RS22975 PF13581 Histidine kinase-like ATPase domain LL041_RS22980 PF08448 PAS fold LL041_RS22980 PF13581 Histidine kinase-like ATPase domain LL041_RS22980 PF13466 STAS domain LL041_RS22980 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS23000 PF00082 Subtilase family LL041_RS23000 PF05922 Peptidase inhibitor I9 LL041_RS23015 PF00392 Bacterial regulatory proteins, gntR family LL041_RS23015 PF00155 Aminotransferase class I and II LL041_RS23025 PF00293 NUDIX domain LL041_RS23050 PF13085 2Fe-2S iron-sulfur cluster binding domain LL041_RS23050 PF13183 4Fe-4S dicluster domain LL041_RS23055 PF00890 FAD binding domain LL041_RS23055 PF02910 Fumarate reductase flavoprotein C-term LL041_RS23075 PF00009 Elongation factor Tu GTP binding domain LL041_RS23075 PF14492 Elongation Factor G, domain II LL041_RS23075 PF00679 Elongation factor G C-terminus LL041_RS23075 PF03144 Elongation factor Tu domain 2 LL041_RS23080 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS23080 PF12911 N-terminal TM domain of oligopeptide transport permease C LL041_RS23085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL041_RS23090 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS23095 PF00005 ABC transporter LL041_RS23095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS23100 PF00005 ABC transporter LL041_RS23100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS23110 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS23115 PF12911 N-terminal TM domain of oligopeptide transport permease C LL041_RS23115 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS23120 PF00005 ABC transporter LL041_RS23120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS23125 PF00005 ABC transporter LL041_RS23125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS23130 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LL041_RS23130 PF00326 Prolyl oligopeptidase family LL041_RS23140 PF01425 Amidase LL041_RS23145 PF02585 GlcNAc-PI de-N-acetylase LL041_RS23160 PF07690 Major Facilitator Superfamily LL041_RS23180 PF00037 4Fe-4S binding domain LL041_RS23185 PF00155 Aminotransferase class I and II LL041_RS23200 PF01546 Peptidase family M20/M25/M40 LL041_RS23200 PF07687 Peptidase dimerisation domain LL041_RS23205 PF03641 Possible lysine decarboxylase LL041_RS23210 PF00809 Pterin binding enzyme LL041_RS23220 PF03352 Methyladenine glycosylase LL041_RS23220 PF13302 Acetyltransferase (GNAT) domain LL041_RS23220 PF13673 Acetyltransferase (GNAT) domain LL041_RS23220 PF00117 Glutamine amidotransferase class-I LL041_RS23220 PF00958 GMP synthase C terminal domain LL041_RS23225 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS23235 PF01596 O-methyltransferase LL041_RS23240 PF08281 Sigma-70, region 4 LL041_RS23240 PF04542 Sigma-70 region 2 LL041_RS23250 PF13180 PDZ domain LL041_RS23255 PF02416 mttA/Hcf106 family LL041_RS23265 PF01883 Iron-sulfur cluster assembly protein LL041_RS23265 PF10609 NUBPL iron-transfer P-loop NTPase LL041_RS23290 PF01544 CorA-like Mg2+ transporter protein LL041_RS23300 PF07690 Major Facilitator Superfamily LL041_RS23310 PF02811 PHP domain LL041_RS23315 PF01914 MarC family integral membrane protein LL041_RS23325 PF01936 NYN domain LL041_RS23335 PF00270 DEAD/DEAH box helicase LL041_RS23335 PF00271 Helicase conserved C-terminal domain LL041_RS23395 PF00581 Rhodanese-like domain LL041_RS23395 PF00899 ThiF family LL041_RS23400 PF00561 alpha/beta hydrolase fold LL041_RS23405 PF00561 alpha/beta hydrolase fold LL041_RS23420 PF13361 UvrD-like helicase C-terminal domain LL041_RS23420 PF00580 UvrD/REP helicase N-terminal domain LL041_RS23425 PF13361 UvrD-like helicase C-terminal domain LL041_RS23425 PF00580 UvrD/REP helicase N-terminal domain LL041_RS23430 PF07687 Peptidase dimerisation domain LL041_RS23430 PF01546 Peptidase family M20/M25/M40 LL041_RS23435 PF00293 NUDIX domain LL041_RS23435 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LL041_RS23435 PF09297 NADH pyrophosphatase zinc ribbon domain LL041_RS23440 PF00462 Glutaredoxin LL041_RS23445 PF00580 UvrD/REP helicase N-terminal domain LL041_RS23445 PF13361 UvrD-like helicase C-terminal domain LL041_RS23445 PF00570 HRDC domain LL041_RS23455 PF02467 Transcription factor WhiB LL041_RS23470 PF03109 ABC1 family LL041_RS23515 PF02391 MoaE protein LL041_RS23525 PF05362 Lon protease (S16) C-terminal proteolytic domain LL041_RS23525 PF13180 PDZ domain LL041_RS23535 PF03699 Uncharacterised protein family (UPF0182) LL041_RS23560 PF00199 Catalase LL041_RS23560 PF06628 Catalase-related immune-responsive LL041_RS23570 PF00459 Inositol monophosphatase family LL041_RS23580 PF00893 Small Multidrug Resistance protein LL041_RS23585 PF03193 RsgA GTPase LL041_RS23590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LL041_RS23600 PF02586 SOS response associated peptidase (SRAP) LL041_RS23610 PF08281 Sigma-70, region 4 LL041_RS23610 PF04542 Sigma-70 region 2 LL041_RS23615 PF13490 Putative zinc-finger LL041_RS23620 PF01966 HD domain LL041_RS23635 PF01327 Polypeptide deformylase LL041_RS23645 PF00067 Cytochrome P450 LL041_RS23650 PF12833 Helix-turn-helix domain LL041_RS23660 PF00268 Ribonucleotide reductase, small chain LL041_RS23665 PF02867 Ribonucleotide reductase, barrel domain LL041_RS23665 PF00317 Ribonucleotide reductase, all-alpha domain LL041_RS23665 PF03477 ATP cone domain LL041_RS23675 PF00474 Sodium:solute symporter family LL041_RS23685 PF07702 UTRA domain LL041_RS23685 PF00392 Bacterial regulatory proteins, gntR family LL041_RS23690 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LL041_RS23695 PF12282 Signal transduction histidine kinase LL041_RS23695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS23695 PF07568 Histidine kinase LL041_RS23700 PF02467 Transcription factor WhiB LL041_RS23705 PF00781 Diacylglycerol kinase catalytic domain LL041_RS23715 PF04542 Sigma-70 region 2 LL041_RS23715 PF04539 Sigma-70 region 3 LL041_RS23715 PF04545 Sigma-70, region 4 LL041_RS23720 PF13581 Histidine kinase-like ATPase domain LL041_RS23730 PF00999 Sodium/hydrogen exchanger family LL041_RS23755 PF00348 Polyprenyl synthetase LL041_RS23760 PF00583 Acetyltransferase (GNAT) family LL041_RS23770 PF00115 Cytochrome C and Quinol oxidase polypeptide I LL041_RS23805 PF09055 Nickel-containing superoxide dismutase LL041_RS23820 PF13847 Methyltransferase domain LL041_RS23825 PF00005 ABC transporter LL041_RS23830 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS23835 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL041_RS23840 PF00390 Malic enzyme, N-terminal domain LL041_RS23840 PF03949 Malic enzyme, NAD binding domain LL041_RS23845 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS23845 PF00107 Zinc-binding dehydrogenase LL041_RS23875 PF16078 2-oxoglutarate dehydrogenase N-terminus LL041_RS23875 PF00676 Dehydrogenase E1 component LL041_RS23875 PF02779 Transketolase, pyrimidine binding domain LL041_RS23875 PF16870 2-oxoglutarate dehydrogenase C-terminal LL041_RS23875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LL041_RS23880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS23880 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS23880 PF00672 HAMP domain LL041_RS23885 PF00072 Response regulator receiver domain LL041_RS23885 PF00486 Transcriptional regulatory protein, C terminal LL041_RS23890 PF01795 MraW methylase family LL041_RS23895 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS23895 PF05362 Lon protease (S16) C-terminal proteolytic domain LL041_RS23895 PF02190 ATP-dependent protease La (LON) substrate-binding domain LL041_RS23915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS23915 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS23940 PF00877 NlpC/P60 family LL041_RS23950 PF00440 Bacterial regulatory proteins, tetR family LL041_RS23955 PF11583 P-aminobenzoate N-oxygenase AurF LL041_RS23960 PF00905 Penicillin binding protein transpeptidase domain LL041_RS23965 PF01098 Cell cycle protein LL041_RS23985 PF01068 ATP dependent DNA ligase domain LL041_RS23985 PF04679 ATP dependent DNA ligase C terminal region LL041_RS23985 PF13298 DNA polymerase Ligase (LigD) LL041_RS23990 PF02735 Ku70/Ku80 beta-barrel domain LL041_RS23995 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS23995 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS24000 PF04545 Sigma-70, region 4 LL041_RS24000 PF04542 Sigma-70 region 2 LL041_RS24010 PF04545 Sigma-70, region 4 LL041_RS24010 PF04542 Sigma-70 region 2 LL041_RS24015 PF10099 Anti-sigma-K factor rskA LL041_RS24025 PF02469 Fasciclin domain LL041_RS24060 PF03631 Virulence factor BrkB LL041_RS24065 PF01740 STAS domain LL041_RS24080 PF00561 alpha/beta hydrolase fold LL041_RS24180 PF00145 C-5 cytosine-specific DNA methylase LL041_RS24220 PF01548 Transposase LL041_RS24220 PF02371 Transposase IS116/IS110/IS902 family LL041_RS24235 PF07702 UTRA domain LL041_RS24235 PF00392 Bacterial regulatory proteins, gntR family LL041_RS24245 PF00392 Bacterial regulatory proteins, gntR family LL041_RS24245 PF07702 UTRA domain LL041_RS24255 PF01580 FtsK/SpoIIIE family LL041_RS24310 PF00072 Response regulator receiver domain LL041_RS24310 PF00486 Transcriptional regulatory protein, C terminal LL041_RS24315 PF05746 DALR anticodon binding domain LL041_RS24315 PF03485 Arginyl tRNA synthetase N terminal domain LL041_RS24315 PF00750 tRNA synthetases class I (R) LL041_RS24320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LL041_RS24320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LL041_RS24325 PF03447 Homoserine dehydrogenase, NAD binding domain LL041_RS24325 PF00742 Homoserine dehydrogenase LL041_RS24325 PF01842 ACT domain LL041_RS24330 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS24335 PF00288 GHMP kinases N terminal domain LL041_RS24340 PF07498 Rho termination factor, N-terminal domain LL041_RS24340 PF07497 Rho termination factor, RNA-binding domain LL041_RS24340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LL041_RS24345 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS24350 PF01197 Ribosomal protein L31 LL041_RS24355 PF03462 PCRF domain LL041_RS24355 PF00472 RF-1 domain LL041_RS24360 PF17827 PrmC N-terminal domain LL041_RS24360 PF13649 Methyltransferase domain LL041_RS24365 PF01300 Telomere recombination LL041_RS24370 PF01451 Low molecular weight phosphotyrosine protein phosphatase LL041_RS24375 PF00464 Serine hydroxymethyltransferase LL041_RS24380 PF00953 Glycosyl transferase family 4 LL041_RS24390 PF00119 ATP synthase A chain LL041_RS24395 PF00137 ATP synthase subunit C LL041_RS24400 PF00430 ATP synthase B/B' CF(0) LL041_RS24405 PF00213 ATP synthase delta (OSCP) subunit LL041_RS24410 PF02874 ATP synthase alpha/beta family, beta-barrel domain LL041_RS24410 PF00306 ATP synthase alpha/beta chain, C terminal domain LL041_RS24410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LL041_RS24415 PF00231 ATP synthase LL041_RS24420 PF02874 ATP synthase alpha/beta family, beta-barrel domain LL041_RS24420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LL041_RS24425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LL041_RS24435 PF00704 Glycosyl hydrolases family 18 LL041_RS24435 PF00041 Fibronectin type III domain LL041_RS24435 PF00553 Cellulose binding domain LL041_RS24440 PF00196 Bacterial regulatory proteins, luxR family LL041_RS24440 PF00072 Response regulator receiver domain LL041_RS24445 PF07730 Histidine kinase LL041_RS24455 PF01923 Cobalamin adenosyltransferase LL041_RS24465 PF00005 ABC transporter LL041_RS24465 PF13732 Domain of unknown function (DUF4162) LL041_RS24470 PF00440 Bacterial regulatory proteins, tetR family LL041_RS24475 PF08291 Peptidase M15 LL041_RS24475 PF01471 Putative peptidoglycan binding domain LL041_RS24480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS24480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS24495 PF01939 Endonuclease NucS LL041_RS24505 PF00296 Luciferase-like monooxygenase LL041_RS24520 PF00005 ABC transporter LL041_RS24530 PF00005 ABC transporter LL041_RS24550 PF02803 Thiolase, C-terminal domain LL041_RS24550 PF00108 Thiolase, N-terminal domain LL041_RS24565 PF00072 Response regulator receiver domain LL041_RS24565 PF00486 Transcriptional regulatory protein, C terminal LL041_RS24570 PF00672 HAMP domain LL041_RS24570 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS24570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS24600 PF01910 Thiamine-binding protein LL041_RS24620 PF01642 Methylmalonyl-CoA mutase LL041_RS24620 PF02310 B12 binding domain LL041_RS24630 PF00440 Bacterial regulatory proteins, tetR family LL041_RS24630 PF16859 Tetracyclin repressor-like, C-terminal domain LL041_RS24635 PF00085 Thioredoxin LL041_RS24655 PF00224 Pyruvate kinase, barrel domain LL041_RS24655 PF02887 Pyruvate kinase, alpha/beta domain LL041_RS24660 PF00871 Acetokinase family LL041_RS24665 PF01515 Phosphate acetyl/butaryl transferase LL041_RS24665 PF07085 DRTGG domain LL041_RS24670 PF00365 Phosphofructokinase LL041_RS24680 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS24685 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS24690 PF01547 Bacterial extracellular solute-binding protein LL041_RS24695 PF00072 Response regulator receiver domain LL041_RS24700 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LL041_RS24700 PF00989 PAS fold LL041_RS24700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS24700 PF17203 Single cache domain 3 LL041_RS24705 PF00375 Sodium:dicarboxylate symporter family LL041_RS24710 PF13411 MerR HTH family regulatory protein LL041_RS24715 PF00085 Thioredoxin LL041_RS24725 PF00128 Alpha amylase, catalytic domain LL041_RS24725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LL041_RS24725 PF02806 Alpha amylase, C-terminal all-beta domain LL041_RS24730 PF18085 Maltokinase N-terminal cap domain LL041_RS24730 PF01636 Phosphotransferase enzyme family LL041_RS24735 PF16657 Maltogenic Amylase, C-terminal domain LL041_RS24735 PF00128 Alpha amylase, catalytic domain LL041_RS24740 PF11896 Domain of unknown function (DUF3416) LL041_RS24745 PF11897 Protein of unknown function (DUF3417) LL041_RS24745 PF00343 Carbohydrate phosphorylase LL041_RS24755 PF07504 Fungalysin/Thermolysin Propeptide Motif LL041_RS24755 PF01483 Proprotein convertase P-domain LL041_RS24755 PF01447 Thermolysin metallopeptidase, catalytic domain LL041_RS24755 PF02868 Thermolysin metallopeptidase, alpha-helical domain LL041_RS24760 PF02868 Thermolysin metallopeptidase, alpha-helical domain LL041_RS24760 PF01447 Thermolysin metallopeptidase, catalytic domain LL041_RS24760 PF01483 Proprotein convertase P-domain LL041_RS24760 PF07504 Fungalysin/Thermolysin Propeptide Motif LL041_RS24765 PF00005 ABC transporter LL041_RS24765 PF00664 ABC transporter transmembrane region LL041_RS24770 PF00664 ABC transporter transmembrane region LL041_RS24770 PF00005 ABC transporter LL041_RS24775 PF00664 ABC transporter transmembrane region LL041_RS24775 PF00005 ABC transporter LL041_RS24780 PF00664 ABC transporter transmembrane region LL041_RS24780 PF00005 ABC transporter LL041_RS24785 PF00005 ABC transporter LL041_RS24795 PF07730 Histidine kinase LL041_RS24800 PF00072 Response regulator receiver domain LL041_RS24800 PF00196 Bacterial regulatory proteins, luxR family LL041_RS24805 PF00561 alpha/beta hydrolase fold LL041_RS24810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LL041_RS24810 PF00128 Alpha amylase, catalytic domain LL041_RS24830 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS24845 PF13411 MerR HTH family regulatory protein LL041_RS24860 PF01183 Glycosyl hydrolases family 25 LL041_RS24885 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS24885 PF17866 AAA lid domain LL041_RS24890 PF00082 Subtilase family LL041_RS24895 PF01580 FtsK/SpoIIIE family LL041_RS24905 PF05108 Type VII secretion system ESX-1, transport TM domain B LL041_RS24965 PF03315 Serine dehydratase beta chain LL041_RS24965 PF03313 Serine dehydratase alpha chain LL041_RS24970 PF00464 Serine hydroxymethyltransferase LL041_RS24975 PF01597 Glycine cleavage H-protein LL041_RS24980 PF01571 Aminomethyltransferase folate-binding domain LL041_RS24980 PF08669 Glycine cleavage T-protein C-terminal barrel domain LL041_RS25000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL041_RS25005 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25010 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25010 PF12911 N-terminal TM domain of oligopeptide transport permease C LL041_RS25015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS25015 PF00005 ABC transporter LL041_RS25020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS25020 PF00005 ABC transporter LL041_RS25025 PF03458 UPF0126 domain LL041_RS25035 PF00440 Bacterial regulatory proteins, tetR family LL041_RS25050 PF00266 Aminotransferase class-V LL041_RS25085 PF00999 Sodium/hydrogen exchanger family LL041_RS25100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LL041_RS25100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LL041_RS25110 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS25115 PF01494 FAD binding domain LL041_RS25130 PF13193 AMP-binding enzyme C-terminal domain LL041_RS25130 PF00501 AMP-binding enzyme LL041_RS25135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS25135 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS25135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS25160 PF17864 RuvB AAA lid domain LL041_RS25160 PF05496 Holliday junction DNA helicase RuvB P-loop domain LL041_RS25160 PF05491 RuvB C-terminal winged helix domain LL041_RS25165 PF13472 GDSL-like Lipase/Acylhydrolase family LL041_RS25170 PF00005 ABC transporter LL041_RS25180 PF02553 Cobalt transport protein component CbiN LL041_RS25185 PF01891 Cobalt uptake substrate-specific transmembrane region LL041_RS25190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL041_RS25195 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25200 PF12911 N-terminal TM domain of oligopeptide transport permease C LL041_RS25200 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS25205 PF00005 ABC transporter LL041_RS25210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS25210 PF00005 ABC transporter LL041_RS25225 PF01547 Bacterial extracellular solute-binding protein LL041_RS25240 PF16918 Protein kinase G tetratricopeptide repeat LL041_RS25240 PF16919 Protein kinase G rubredoxin domain LL041_RS25240 PF00069 Protein kinase domain LL041_RS25305 PF00474 Sodium:solute symporter family LL041_RS25315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LL041_RS25330 PF00330 Aconitase family (aconitate hydratase) LL041_RS25330 PF00694 Aconitase C-terminal domain LL041_RS25345 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LL041_RS25345 PF00553 Cellulose binding domain LL041_RS25355 PF01547 Bacterial extracellular solute-binding protein LL041_RS25360 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25365 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25370 PF00480 ROK family LL041_RS25370 PF01325 Iron dependent repressor, N-terminal DNA binding domain LL041_RS25375 PF13407 Periplasmic binding protein domain LL041_RS25380 PF00005 ABC transporter LL041_RS25385 PF02653 Branched-chain amino acid transport system / permease component LL041_RS25390 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LL041_RS25390 PF02780 Transketolase, C-terminal domain LL041_RS25390 PF02779 Transketolase, pyrimidine binding domain LL041_RS25395 PF13520 Amino acid permease LL041_RS25410 PF03816 Cell envelope-related transcriptional attenuator domain LL041_RS25415 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LL041_RS25435 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS25435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS25435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS25440 PF02803 Thiolase, C-terminal domain LL041_RS25440 PF00108 Thiolase, N-terminal domain LL041_RS25445 PF00356 Bacterial regulatory proteins, lacI family LL041_RS25450 PF00703 Glycosyl hydrolases family 2 LL041_RS25450 PF16355 Domain of unknown function (DUF4982) LL041_RS25450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LL041_RS25450 PF02837 Glycosyl hydrolases family 2, sugar binding domain LL041_RS25460 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25465 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25470 PF01612 3'-5' exonuclease LL041_RS25470 PF00570 HRDC domain LL041_RS25485 PF01208 Uroporphyrinogen decarboxylase (URO-D) LL041_RS25490 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS25490 PF08448 PAS fold LL041_RS25490 PF13466 STAS domain LL041_RS25490 PF13581 Histidine kinase-like ATPase domain LL041_RS25495 PF02195 ParB-like nuclease domain LL041_RS25500 PF02153 Prephenate dehydrogenase LL041_RS25505 PF02195 ParB-like nuclease domain LL041_RS25510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL041_RS25520 PF00155 Aminotransferase class I and II LL041_RS25520 PF00392 Bacterial regulatory proteins, gntR family LL041_RS25525 PF00155 Aminotransferase class I and II LL041_RS25530 PF00155 Aminotransferase class I and II LL041_RS25535 PF04820 Tryptophan halogenase LL041_RS25545 PF00005 ABC transporter LL041_RS25545 PF17850 CysA C-terminal regulatory domain LL041_RS25545 PF12857 TOBE-like domain LL041_RS25550 PF00664 ABC transporter transmembrane region LL041_RS25550 PF00005 ABC transporter LL041_RS25555 PF12697 Alpha/beta hydrolase family LL041_RS25565 PF00975 Thioesterase domain LL041_RS25565 PF13193 AMP-binding enzyme C-terminal domain LL041_RS25565 PF00550 Phosphopantetheine attachment site LL041_RS25565 PF00668 Condensation domain LL041_RS25565 PF00501 AMP-binding enzyme LL041_RS25570 PF00668 Condensation domain LL041_RS25570 PF13193 AMP-binding enzyme C-terminal domain LL041_RS25570 PF00501 AMP-binding enzyme LL041_RS25570 PF00550 Phosphopantetheine attachment site LL041_RS25575 PF00975 Thioesterase domain LL041_RS25575 PF13193 AMP-binding enzyme C-terminal domain LL041_RS25575 PF00501 AMP-binding enzyme LL041_RS25575 PF00550 Phosphopantetheine attachment site LL041_RS25575 PF00668 Condensation domain LL041_RS25580 PF00975 Thioesterase domain LL041_RS25590 PF00501 AMP-binding enzyme LL041_RS25590 PF00668 Condensation domain LL041_RS25590 PF00550 Phosphopantetheine attachment site LL041_RS25590 PF00975 Thioesterase domain LL041_RS25590 PF13193 AMP-binding enzyme C-terminal domain LL041_RS25595 PF00196 Bacterial regulatory proteins, luxR family LL041_RS25595 PF00072 Response regulator receiver domain LL041_RS25600 PF07730 Histidine kinase LL041_RS25620 PF00501 AMP-binding enzyme LL041_RS25625 PF03621 MbtH-like protein LL041_RS25640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LL041_RS25640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS25650 PF01593 Flavin containing amine oxidoreductase LL041_RS25655 PF06778 Chlorite dismutase LL041_RS25660 PF00561 alpha/beta hydrolase fold LL041_RS25670 PF05114 Protein of unknown function (DUF692) LL041_RS25675 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal LL041_RS25675 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal LL041_RS25690 PF01522 Polysaccharide deacetylase LL041_RS25695 PF00355 Rieske [2Fe-2S] domain LL041_RS25710 PF01145 SPFH domain / Band 7 family LL041_RS25715 PF00916 Sulfate permease family LL041_RS25715 PF01740 STAS domain LL041_RS25720 PF00484 Carbonic anhydrase LL041_RS25740 PF01225 Mur ligase family, catalytic domain LL041_RS25740 PF02875 Mur ligase family, glutamate ligase domain LL041_RS25740 PF08245 Mur ligase middle domain LL041_RS25745 PF01641 SelR domain LL041_RS25775 PF00535 Glycosyl transferase family 2 LL041_RS25780 PF00486 Transcriptional regulatory protein, C terminal LL041_RS25780 PF00072 Response regulator receiver domain LL041_RS25785 PF00989 PAS fold LL041_RS25785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS25785 PF00672 HAMP domain LL041_RS25785 PF18698 Histidine kinase sensor domain LL041_RS25785 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS25790 PF01370 NAD dependent epimerase/dehydratase family LL041_RS25795 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS25795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS25795 PF00672 HAMP domain LL041_RS25800 PF00486 Transcriptional regulatory protein, C terminal LL041_RS25800 PF00072 Response regulator receiver domain LL041_RS25805 PF00111 2Fe-2S iron-sulfur cluster binding domain LL041_RS25805 PF00175 Oxidoreductase NAD-binding domain LL041_RS25820 PF00392 Bacterial regulatory proteins, gntR family LL041_RS25820 PF07729 FCD domain LL041_RS25825 PF07690 Major Facilitator Superfamily LL041_RS25830 PF02734 DAK2 domain LL041_RS25830 PF02733 Dak1 domain LL041_RS25835 PF02502 Ribose/Galactose Isomerase LL041_RS25840 PF00121 Triosephosphate isomerase LL041_RS25845 PF01261 Xylose isomerase-like TIM barrel LL041_RS25850 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LL041_RS25850 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term LL041_RS25855 PF00005 ABC transporter LL041_RS25855 PF00571 CBS domain LL041_RS25860 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25865 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS25900 PF18416 N-acetylglucosamine binding protein domain 2 LL041_RS25900 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LL041_RS25905 PF00440 Bacterial regulatory proteins, tetR family LL041_RS25905 PF08361 MAATS-type transcriptional repressor, C-terminal region LL041_RS25925 PF00149 Calcineurin-like phosphoesterase LL041_RS25930 PF01321 Creatinase/Prolidase N-terminal domain LL041_RS25930 PF00557 Metallopeptidase family M24 LL041_RS25940 PF00128 Alpha amylase, catalytic domain LL041_RS25940 PF11941 Domain of unknown function (DUF3459) LL041_RS25955 PF00720 Subtilisin inhibitor-like LL041_RS25965 PF00128 Alpha amylase, catalytic domain LL041_RS25970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LL041_RS25970 PF00128 Alpha amylase, catalytic domain LL041_RS25990 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LL041_RS25995 PF03176 MMPL family LL041_RS26010 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS26015 PF00005 ABC transporter LL041_RS26030 PF00009 Elongation factor Tu GTP binding domain LL041_RS26035 PF01507 Phosphoadenosine phosphosulfate reductase family LL041_RS26045 PF01507 Phosphoadenosine phosphosulfate reductase family LL041_RS26055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LL041_RS26055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LL041_RS26075 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS26075 PF18158 Adaptive response protein AidB N-terminal domain LL041_RS26075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS26090 PF02311 AraC-like ligand binding domain LL041_RS26090 PF12833 Helix-turn-helix domain LL041_RS26095 PF12833 Helix-turn-helix domain LL041_RS26110 PF00356 Bacterial regulatory proteins, lacI family LL041_RS26115 PF00135 Carboxylesterase family LL041_RS26150 PF02574 Homocysteine S-methyltransferase LL041_RS26155 PF00196 Bacterial regulatory proteins, luxR family LL041_RS26160 PF07690 Major Facilitator Superfamily LL041_RS26205 PF00657 GDSL-like Lipase/Acylhydrolase LL041_RS26220 PF00293 NUDIX domain LL041_RS26220 PF00300 Histidine phosphatase superfamily (branch 1) LL041_RS26250 PF02929 Beta galactosidase small chain LL041_RS26250 PF16353 Domain of unknown function(DUF4981) LL041_RS26250 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LL041_RS26250 PF02837 Glycosyl hydrolases family 2, sugar binding domain LL041_RS26255 PF00480 ROK family LL041_RS26255 PF01047 MarR family LL041_RS26260 PF04030 D-arabinono-1,4-lactone oxidase LL041_RS26260 PF01565 FAD binding domain LL041_RS26270 PF00553 Cellulose binding domain LL041_RS26270 PF00041 Fibronectin type III domain LL041_RS26270 PF01341 Glycosyl hydrolases family 6 LL041_RS26275 PF03193 RsgA GTPase LL041_RS26280 PF02805 Metal binding domain of Ada LL041_RS26280 PF06029 AlkA N-terminal domain LL041_RS26280 PF00730 HhH-GPD superfamily base excision DNA repair protein LL041_RS26280 PF12833 Helix-turn-helix domain LL041_RS26285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LL041_RS26285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LL041_RS26300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL041_RS26300 PF00205 Thiamine pyrophosphate enzyme, central domain LL041_RS26300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS26330 PF00392 Bacterial regulatory proteins, gntR family LL041_RS26330 PF07729 FCD domain LL041_RS26340 PF13556 PucR C-terminal helix-turn-helix domain LL041_RS26340 PF05651 Putative sugar diacid recognition LL041_RS26340 PF17853 GGDEF-like domain LL041_RS26345 PF00941 FAD binding domain in molybdopterin dehydrogenase LL041_RS26345 PF03450 CO dehydrogenase flavoprotein C-terminal domain LL041_RS26350 PF00111 2Fe-2S iron-sulfur cluster binding domain LL041_RS26350 PF01799 [2Fe-2S] binding domain LL041_RS26355 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LL041_RS26355 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LL041_RS26390 PF00534 Glycosyl transferases group 1 LL041_RS26395 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LL041_RS26395 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LL041_RS26400 PF00535 Glycosyl transferase family 2 LL041_RS26420 PF00089 Trypsin LL041_RS26425 PF00072 Response regulator receiver domain LL041_RS26425 PF00196 Bacterial regulatory proteins, luxR family LL041_RS26430 PF00196 Bacterial regulatory proteins, luxR family LL041_RS26430 PF13185 GAF domain LL041_RS26435 PF13193 AMP-binding enzyme C-terminal domain LL041_RS26435 PF00501 AMP-binding enzyme LL041_RS26440 PF00501 AMP-binding enzyme LL041_RS26440 PF13193 AMP-binding enzyme C-terminal domain LL041_RS26445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS26445 PF00205 Thiamine pyrophosphate enzyme, central domain LL041_RS26445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL041_RS26460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LL041_RS26460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LL041_RS26465 PF01261 Xylose isomerase-like TIM barrel LL041_RS26485 PF00576 HIUase/Transthyretin family LL041_RS26490 PF01014 Uricase LL041_RS26495 PF01979 Amidohydrolase family LL041_RS26505 PF01183 Glycosyl hydrolases family 25 LL041_RS26570 PF00753 Metallo-beta-lactamase superfamily LL041_RS26585 PF00155 Aminotransferase class I and II LL041_RS26590 PF01638 HxlR-like helix-turn-helix LL041_RS26600 PF13519 von Willebrand factor type A domain LL041_RS26605 PF04183 IucA / IucC family LL041_RS26605 PF06276 Ferric iron reductase FhuF-like transporter LL041_RS26610 PF06276 Ferric iron reductase FhuF-like transporter LL041_RS26610 PF04183 IucA / IucC family LL041_RS26620 PF01274 Malate synthase LL041_RS26635 PF01614 Bacterial transcriptional regulator LL041_RS26635 PF09339 IclR helix-turn-helix domain LL041_RS26640 PF01979 Amidohydrolase family LL041_RS26645 PF03561 Allantoicase repeat LL041_RS26655 PF00545 ribonuclease LL041_RS26670 PF00196 Bacterial regulatory proteins, luxR family LL041_RS26670 PF00072 Response regulator receiver domain LL041_RS26680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS26680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS26685 PF07702 UTRA domain LL041_RS26685 PF00392 Bacterial regulatory proteins, gntR family LL041_RS26695 PF02653 Branched-chain amino acid transport system / permease component LL041_RS26700 PF00005 ABC transporter LL041_RS26705 PF00480 ROK family LL041_RS26715 PF00176 SNF2 family N-terminal domain LL041_RS26715 PF00271 Helicase conserved C-terminal domain LL041_RS26715 PF12419 SNF2 Helicase protein LL041_RS26745 PF01593 Flavin containing amine oxidoreductase LL041_RS26760 PF01593 Flavin containing amine oxidoreductase LL041_RS26775 PF01593 Flavin containing amine oxidoreductase LL041_RS26780 PF00348 Polyprenyl synthetase LL041_RS26785 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LL041_RS26790 PF00875 DNA photolyase LL041_RS26790 PF03441 FAD binding domain of DNA photolyase LL041_RS26795 PF13460 NAD(P)H-binding LL041_RS26795 PF11066 Protein of unknown function (DUF2867) LL041_RS26805 PF00313 'Cold-shock' DNA-binding domain LL041_RS26810 PF00270 DEAD/DEAH box helicase LL041_RS26810 PF00271 Helicase conserved C-terminal domain LL041_RS26820 PF00313 'Cold-shock' DNA-binding domain LL041_RS26825 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LL041_RS26825 PF17770 Ribonuclease J C-terminal domain LL041_RS26825 PF12706 Beta-lactamase superfamily domain LL041_RS26830 PF01235 Sodium:alanine symporter family LL041_RS26850 PF00313 'Cold-shock' DNA-binding domain LL041_RS26870 PF02627 Carboxymuconolactone decarboxylase family LL041_RS26890 PF03702 Anhydro-N-acetylmuramic acid kinase LL041_RS26900 PF10431 C-terminal, D2-small domain, of ClpB protein LL041_RS26900 PF02861 Clp amino terminal domain, pathogenicity island component LL041_RS26900 PF17871 AAA lid domain LL041_RS26900 PF00004 ATPase family associated with various cellular activities (AAA) LL041_RS26900 PF07724 AAA domain (Cdc48 subfamily) LL041_RS26905 PF00557 Metallopeptidase family M24 LL041_RS26920 PF00795 Carbon-nitrogen hydrolase LL041_RS26925 PF00202 Aminotransferase class-III LL041_RS26930 PF01979 Amidohydrolase family LL041_RS26940 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LL041_RS26955 PF10437 Bacterial lipoate protein ligase C-terminus LL041_RS26955 PF03099 Biotin/lipoate A/B protein ligase family LL041_RS26960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS26960 PF00005 ABC transporter LL041_RS26965 PF00005 ABC transporter LL041_RS26965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS26970 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS26975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL041_RS26980 PF07729 FCD domain LL041_RS26985 PF05448 Acetyl xylan esterase (AXE1) LL041_RS26990 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase LL041_RS26990 PF00754 F5/8 type C domain LL041_RS26990 PF13088 BNR repeat-like domain LL041_RS26995 PF00701 Dihydrodipicolinate synthetase family LL041_RS27000 PF00480 ROK family LL041_RS27005 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LL041_RS27015 PF00459 Inositol monophosphatase family LL041_RS27025 PF01661 Macro domain LL041_RS27030 PF02837 Glycosyl hydrolases family 2, sugar binding domain LL041_RS27030 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LL041_RS27030 PF00703 Glycosyl hydrolases family 2 LL041_RS27030 PF16353 Domain of unknown function(DUF4981) LL041_RS27030 PF02929 Beta galactosidase small chain LL041_RS27035 PF01022 Bacterial regulatory protein, arsR family LL041_RS27045 PF06029 AlkA N-terminal domain LL041_RS27045 PF02805 Metal binding domain of Ada LL041_RS27045 PF00730 HhH-GPD superfamily base excision DNA repair protein LL041_RS27045 PF12833 Helix-turn-helix domain LL041_RS27050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LL041_RS27050 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LL041_RS27055 PF02146 Sir2 family LL041_RS27065 PF02595 Glycerate kinase family LL041_RS27080 PF02666 Phosphatidylserine decarboxylase LL041_RS27085 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS27085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS27085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS27095 PF03328 HpcH/HpaI aldolase/citrate lyase family LL041_RS27100 PF02310 B12 binding domain LL041_RS27100 PF01642 Methylmalonyl-CoA mutase LL041_RS27105 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS27105 PF00107 Zinc-binding dehydrogenase LL041_RS27110 PF17754 MftR C-terminal domain LL041_RS27110 PF00440 Bacterial regulatory proteins, tetR family LL041_RS27115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS27115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS27130 PF00561 alpha/beta hydrolase fold LL041_RS27135 PF04055 Radical SAM superfamily LL041_RS27145 PF07690 Major Facilitator Superfamily LL041_RS27150 PF13466 STAS domain LL041_RS27150 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS27150 PF08448 PAS fold LL041_RS27150 PF13581 Histidine kinase-like ATPase domain LL041_RS27160 PF04951 D-aminopeptidase LL041_RS27165 PF01546 Peptidase family M20/M25/M40 LL041_RS27165 PF07687 Peptidase dimerisation domain LL041_RS27170 PF00326 Prolyl oligopeptidase family LL041_RS27170 PF07676 WD40-like Beta Propeller Repeat LL041_RS27175 PF02016 LD-carboxypeptidase N-terminal domain LL041_RS27175 PF17676 LD-carboxypeptidase C-terminal domain LL041_RS27200 PF00296 Luciferase-like monooxygenase LL041_RS27210 PF02779 Transketolase, pyrimidine binding domain LL041_RS27210 PF02780 Transketolase, C-terminal domain LL041_RS27210 PF00456 Transketolase, thiamine diphosphate binding domain LL041_RS27215 PF04679 ATP dependent DNA ligase C terminal region LL041_RS27215 PF01068 ATP dependent DNA ligase domain LL041_RS27215 PF13298 DNA polymerase Ligase (LigD) LL041_RS27225 PF00741 Gas vesicle protein LL041_RS27245 PF03364 Polyketide cyclase / dehydrase and lipid transport LL041_RS27250 PF00741 Gas vesicle protein LL041_RS27260 PF00741 Gas vesicle protein LL041_RS27265 PF05121 Gas vesicle protein K LL041_RS27265 PF00741 Gas vesicle protein LL041_RS27270 PF08241 Methyltransferase domain LL041_RS27275 PF00005 ABC transporter LL041_RS27275 PF12848 ABC transporter LL041_RS27290 PF01965 DJ-1/PfpI family LL041_RS27295 PF00571 CBS domain LL041_RS27305 PF04545 Sigma-70, region 4 LL041_RS27305 PF04539 Sigma-70 region 3 LL041_RS27305 PF04542 Sigma-70 region 2 LL041_RS27320 PF12706 Beta-lactamase superfamily domain LL041_RS27365 PF00012 Hsp70 protein LL041_RS27385 PF01329 Pterin 4 alpha carbinolamine dehydratase LL041_RS27395 PF18370 Rhamnogalacturonan I lyases beta-sheet domain LL041_RS27405 PF00942 Cellulose binding domain LL041_RS27405 PF03442 Carbohydrate binding domain X2 LL041_RS27410 PF02011 Glycosyl hydrolase family 48 LL041_RS27410 PF00041 Fibronectin type III domain LL041_RS27410 PF00553 Cellulose binding domain LL041_RS27415 PF00553 Cellulose binding domain LL041_RS27415 PF00041 Fibronectin type III domain LL041_RS27415 PF01341 Glycosyl hydrolases family 6 LL041_RS27425 PF00106 short chain dehydrogenase LL041_RS27430 PF00248 Aldo/keto reductase family LL041_RS27435 PF00501 AMP-binding enzyme LL041_RS27440 PF03466 LysR substrate binding domain LL041_RS27440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS27445 PF13593 SBF-like CPA transporter family (DUF4137) LL041_RS27450 PF02634 FdhD/NarQ family LL041_RS27455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LL041_RS27455 PF00384 Molybdopterin oxidoreductase LL041_RS27455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LL041_RS27455 PF12838 4Fe-4S dicluster domain LL041_RS27455 PF01568 Molydopterin dinucleotide binding domain LL041_RS27460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LL041_RS27460 PF10531 SLBB domain LL041_RS27460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LL041_RS27465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LL041_RS27465 PF00384 Molybdopterin oxidoreductase LL041_RS27465 PF01568 Molydopterin dinucleotide binding domain LL041_RS27470 PF02558 Ketopantoate reductase PanE/ApbA LL041_RS27470 PF08546 Ketopantoate reductase PanE/ApbA C terminal LL041_RS27485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LL041_RS27485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LL041_RS27490 PF00392 Bacterial regulatory proteins, gntR family LL041_RS27490 PF07729 FCD domain LL041_RS27495 PF00480 ROK family LL041_RS27500 PF00005 ABC transporter LL041_RS27505 PF02653 Branched-chain amino acid transport system / permease component LL041_RS27510 PF13407 Periplasmic binding protein domain LL041_RS27515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL041_RS27515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL041_RS27570 PF07690 Major Facilitator Superfamily LL041_RS27575 PF13380 CoA binding domain LL041_RS27575 PF13607 Succinyl-CoA ligase like flavodoxin domain LL041_RS27580 PF02515 CoA-transferase family III LL041_RS27585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS27585 PF00205 Thiamine pyrophosphate enzyme, central domain LL041_RS27585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL041_RS27590 PF08442 ATP-grasp domain LL041_RS27590 PF00549 CoA-ligase LL041_RS27595 PF02629 CoA binding domain LL041_RS27595 PF00549 CoA-ligase LL041_RS27605 PF03641 Possible lysine decarboxylase LL041_RS27610 PF00106 short chain dehydrogenase LL041_RS27620 PF00533 BRCA1 C Terminus (BRCT) domain LL041_RS27620 PF01653 NAD-dependent DNA ligase adenylation domain LL041_RS27620 PF03120 NAD-dependent DNA ligase OB-fold domain LL041_RS27620 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LL041_RS27620 PF12826 Helix-hairpin-helix motif LL041_RS27625 PF00563 EAL domain LL041_RS27625 PF03707 Bacterial signalling protein N terminal repeat LL041_RS27625 PF00990 Diguanylate cyclase, GGDEF domain LL041_RS27630 PF02686 Glu-tRNAGln amidotransferase C subunit LL041_RS27635 PF01425 Amidase LL041_RS27645 PF02637 GatB domain LL041_RS27645 PF02934 GatB/GatE catalytic domain LL041_RS27650 PF01209 ubiE/COQ5 methyltransferase family LL041_RS27660 PF03176 MMPL family LL041_RS27665 PF13302 Acetyltransferase (GNAT) domain LL041_RS27675 PF00196 Bacterial regulatory proteins, luxR family LL041_RS27675 PF00072 Response regulator receiver domain LL041_RS27685 PF07995 Glucose / Sorbosone dehydrogenase LL041_RS27690 PF00248 Aldo/keto reductase family LL041_RS27695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL041_RS27700 PF00990 Diguanylate cyclase, GGDEF domain LL041_RS27700 PF13188 PAS domain LL041_RS27700 PF00563 EAL domain LL041_RS27700 PF03707 Bacterial signalling protein N terminal repeat LL041_RS27705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS27705 PF00205 Thiamine pyrophosphate enzyme, central domain LL041_RS27705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL041_RS27710 PF10369 Small subunit of acetolactate synthase LL041_RS27715 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LL041_RS27715 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LL041_RS27720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL041_RS27720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL041_RS27720 PF01842 ACT domain LL041_RS27725 PF07690 Major Facilitator Superfamily LL041_RS27735 PF17853 GGDEF-like domain LL041_RS27735 PF13556 PucR C-terminal helix-turn-helix domain LL041_RS27740 PF01619 Proline dehydrogenase LL041_RS27745 PF00171 Aldehyde dehydrogenase family LL041_RS27750 PF00180 Isocitrate/isopropylmalate dehydrogenase LL041_RS27755 PF01063 Amino-transferase class IV LL041_RS27760 PF00682 HMGL-like LL041_RS27760 PF08502 LeuA allosteric (dimerisation) domain LL041_RS27770 PF04264 YceI-like domain LL041_RS27775 PF02310 B12 binding domain LL041_RS27775 PF04055 Radical SAM superfamily LL041_RS27780 PF00106 short chain dehydrogenase LL041_RS27785 PF01039 Carboxyl transferase domain LL041_RS27805 PF03259 Roadblock/LC7 domain LL041_RS27825 PF03259 Roadblock/LC7 domain LL041_RS27830 PF00989 PAS fold LL041_RS27830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS27830 PF00672 HAMP domain LL041_RS27830 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS27840 PF01557 Fumarylacetoacetate (FAA) hydrolase family LL041_RS27845 PF00749 tRNA synthetases class I (E and Q), catalytic domain LL041_RS27880 PF13411 MerR HTH family regulatory protein LL041_RS27890 PF01614 Bacterial transcriptional regulator LL041_RS27890 PF09339 IclR helix-turn-helix domain LL041_RS27895 PF00330 Aconitase family (aconitate hydratase) LL041_RS27900 PF00694 Aconitase C-terminal domain LL041_RS27910 PF00216 Bacterial DNA-binding protein LL041_RS27920 PF01983 Guanylyl transferase CofC like LL041_RS27930 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LL041_RS27930 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LL041_RS27935 PF07478 D-ala D-ala ligase C-terminus LL041_RS27935 PF01820 D-ala D-ala ligase N-terminus LL041_RS27950 PF02769 AIR synthase related protein, C-terminal domain LL041_RS27950 PF00586 AIR synthase related protein, N-terminal domain LL041_RS27955 PF08543 Phosphomethylpyrimidine kinase LL041_RS27960 PF00830 Ribosomal L28 family LL041_RS27965 PF13684 Dihydroxyacetone kinase family LL041_RS27965 PF02734 DAK2 domain LL041_RS27970 PF00270 DEAD/DEAH box helicase LL041_RS27970 PF00271 Helicase conserved C-terminal domain LL041_RS27970 PF17191 RecG wedge domain LL041_RS27980 PF01467 Cytidylyltransferase-like LL041_RS27990 PF02620 Large ribosomal RNA subunit accumulation protein YceD LL041_RS27995 PF01783 Ribosomal L32p protein family LL041_RS28000 PF14622 Ribonuclease-III-like LL041_RS28000 PF00035 Double-stranded RNA binding motif LL041_RS28005 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LL041_RS28005 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LL041_RS28010 PF01638 HxlR-like helix-turn-helix LL041_RS28015 PF00188 Cysteine-rich secretory protein family LL041_RS28020 PF00708 Acylphosphatase LL041_RS28030 PF06470 SMC proteins Flexible Hinge Domain LL041_RS28030 PF02463 RecF/RecN/SMC N terminal domain LL041_RS28035 PF00083 Sugar (and other) transporter LL041_RS28040 PF00448 SRP54-type protein, GTPase domain LL041_RS28040 PF02881 SRP54-type protein, helical bundle domain LL041_RS28055 PF00909 Ammonium Transporter Family LL041_RS28060 PF00543 Nitrogen regulatory protein P-II LL041_RS28065 PF01909 Nucleotidyltransferase domain LL041_RS28065 PF08335 GlnD PII-uridylyltransferase LL041_RS28065 PF01966 HD domain LL041_RS28070 PF00448 SRP54-type protein, GTPase domain LL041_RS28070 PF02978 Signal peptide binding domain LL041_RS28070 PF02881 SRP54-type protein, helical bundle domain LL041_RS28085 PF00886 Ribosomal protein S16 LL041_RS28095 PF05239 PRC-barrel domain LL041_RS28095 PF01782 RimM N-terminal domain LL041_RS28100 PF01746 tRNA (Guanine-1)-methyltransferase LL041_RS28105 PF01245 Ribosomal protein L19 LL041_RS28110 PF10502 Signal peptidase, peptidase S26 LL041_RS28120 PF10502 Signal peptidase, peptidase S26 LL041_RS28125 PF10502 Signal peptidase, peptidase S26 LL041_RS28130 PF00293 NUDIX domain LL041_RS28135 PF10611 Protein of unknown function (DUF2469) LL041_RS28140 PF02021 Uncharacterised protein family UPF0102 LL041_RS28145 PF01078 Magnesium chelatase, subunit ChlI LL041_RS28145 PF13335 Magnesium chelatase, subunit ChlI C-terminal LL041_RS28150 PF17782 DprA winged helix domain LL041_RS28150 PF02481 DNA recombination-mediator protein A LL041_RS28155 PF04545 Sigma-70, region 4 LL041_RS28155 PF04539 Sigma-70 region 3 LL041_RS28155 PF04542 Sigma-70 region 2 LL041_RS28165 PF01551 Peptidase family M23 LL041_RS28170 PF00318 Ribosomal protein S2 LL041_RS28175 PF00889 Elongation factor TS LL041_RS28180 PF00696 Amino acid kinase family LL041_RS28185 PF01765 Ribosome recycling factor LL041_RS28200 PF04055 Radical SAM superfamily LL041_RS28210 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28215 PF08402 TOBE domain LL041_RS28215 PF00005 ABC transporter LL041_RS28245 PF00005 ABC transporter LL041_RS28250 PF00202 Aminotransferase class-III LL041_RS28260 PF00171 Aldehyde dehydrogenase family LL041_RS28270 PF03009 Glycerophosphoryl diester phosphodiesterase family LL041_RS28275 PF00962 Adenosine/AMP deaminase LL041_RS28295 PF00171 Aldehyde dehydrogenase family LL041_RS28305 PF00005 ABC transporter LL041_RS28305 PF08402 TOBE domain LL041_RS28310 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28315 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28320 PF01266 FAD dependent oxidoreductase LL041_RS28330 PF00202 Aminotransferase class-III LL041_RS28340 PF17853 GGDEF-like domain LL041_RS28340 PF13556 PucR C-terminal helix-turn-helix domain LL041_RS28340 PF07905 Purine catabolism regulatory protein-like family LL041_RS28345 PF00171 Aldehyde dehydrogenase family LL041_RS28350 PF14310 Fibronectin type III-like domain LL041_RS28350 PF00933 Glycosyl hydrolase family 3 N terminal domain LL041_RS28350 PF01915 Glycosyl hydrolase family 3 C-terminal domain LL041_RS28350 PF07691 PA14 domain LL041_RS28360 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28365 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28370 PF08533 Beta-galactosidase C-terminal domain LL041_RS28370 PF02449 Beta-galactosidase LL041_RS28370 PF08532 Beta-galactosidase trimerisation domain LL041_RS28385 PF00356 Bacterial regulatory proteins, lacI family LL041_RS28390 PF00196 Bacterial regulatory proteins, luxR family LL041_RS28390 PF00072 Response regulator receiver domain LL041_RS28395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS28395 PF07730 Histidine kinase LL041_RS28405 PF00005 ABC transporter LL041_RS28405 PF02687 FtsX-like permease family LL041_RS28405 PF12704 MacB-like periplasmic core domain LL041_RS28410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS28410 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS28410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS28415 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LL041_RS28415 PF13288 DXP reductoisomerase C-terminal domain LL041_RS28415 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LL041_RS28420 PF17820 PDZ domain LL041_RS28420 PF02163 Peptidase family M50 LL041_RS28425 PF04551 GcpE protein LL041_RS28440 PF03129 Anticodon binding domain LL041_RS28440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LL041_RS28440 PF04073 Aminoacyl-tRNA editing domain LL041_RS28445 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LL041_RS28460 PF02576 RimP N-terminal domain LL041_RS28460 PF17384 RimP C-terminal SH3 domain LL041_RS28465 PF13184 NusA-like KH domain LL041_RS28465 PF08529 NusA N-terminal domain LL041_RS28475 PF11987 Translation-initiation factor 2 LL041_RS28475 PF00009 Elongation factor Tu GTP binding domain LL041_RS28475 PF04760 Translation initiation factor IF-2, N-terminal region LL041_RS28485 PF02033 Ribosome-binding factor A LL041_RS28490 PF16198 tRNA pseudouridylate synthase B C-terminal domain LL041_RS28490 PF09142 tRNA Pseudouridine synthase II, C terminal LL041_RS28490 PF01509 TruB family pseudouridylate synthase (N terminal domain) LL041_RS28500 PF06574 FAD synthetase LL041_RS28500 PF01687 Riboflavin kinase LL041_RS28505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS28505 PF00005 ABC transporter LL041_RS28510 PF00005 ABC transporter LL041_RS28510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS28515 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28515 PF12911 N-terminal TM domain of oligopeptide transport permease C LL041_RS28520 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL041_RS28530 PF10609 NUBPL iron-transfer P-loop NTPase LL041_RS28540 PF00312 Ribosomal protein S15 LL041_RS28545 PF00013 KH domain LL041_RS28545 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LL041_RS28545 PF01138 3' exoribonuclease family, domain 1 LL041_RS28545 PF00575 S1 RNA binding domain LL041_RS28550 PF05193 Peptidase M16 inactive domain LL041_RS28550 PF00675 Insulinase (Peptidase family M16) LL041_RS28555 PF05173 Dihydrodipicolinate reductase, C-terminus LL041_RS28555 PF01113 Dihydrodipicolinate reductase, N-terminus LL041_RS28575 PF00701 Dihydrodipicolinate synthetase family LL041_RS28580 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LL041_RS28580 PF12706 Beta-lactamase superfamily domain LL041_RS28580 PF17770 Ribonuclease J C-terminal domain LL041_RS28600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LL041_RS28610 PF07228 Stage II sporulation protein E (SpoIIE) LL041_RS28610 PF00672 HAMP domain LL041_RS28615 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS28615 PF00072 Response regulator receiver domain LL041_RS28615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS28615 PF09308 LuxQ, periplasmic LL041_RS28620 PF00072 Response regulator receiver domain LL041_RS28625 PF17854 FtsK alpha domain LL041_RS28625 PF09397 Ftsk gamma domain LL041_RS28625 PF01580 FtsK/SpoIIIE family LL041_RS28635 PF18693 TRAM domain LL041_RS28635 PF00919 Uncharacterized protein family UPF0004 LL041_RS28635 PF04055 Radical SAM superfamily LL041_RS28640 PF01066 CDP-alcohol phosphatidyltransferase LL041_RS28645 PF00994 Probable molybdopterin binding domain LL041_RS28645 PF18146 Damage-inducible protein CinA KH domain LL041_RS28645 PF02464 Competence-damaged protein LL041_RS28655 PF00210 Ferritin-like domain LL041_RS28665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LL041_RS28665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LL041_RS28670 PF00271 Helicase conserved C-terminal domain LL041_RS28670 PF08494 DEAD/H associated LL041_RS28670 PF00270 DEAD/DEAH box helicase LL041_RS28675 PF02311 AraC-like ligand binding domain LL041_RS28675 PF12833 Helix-turn-helix domain LL041_RS28700 PF01594 AI-2E family transporter LL041_RS28705 PF00154 recA bacterial DNA recombination protein LL041_RS28710 PF02631 RecX family LL041_RS28735 PF03741 Integral membrane protein TerC family LL041_RS28750 PF01494 FAD binding domain LL041_RS28755 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28760 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS28765 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL041_RS28770 PF00005 ABC transporter LL041_RS28775 PF00072 Response regulator receiver domain LL041_RS28775 PF00486 Transcriptional regulatory protein, C terminal LL041_RS28780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS28780 PF00672 HAMP domain LL041_RS28780 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS28785 PF16868 NMT1-like family LL041_RS28800 PF00919 Uncharacterized protein family UPF0004 LL041_RS28800 PF04055 Radical SAM superfamily LL041_RS28830 PF01678 Diaminopimelate epimerase LL041_RS28835 PF13291 ACT domain LL041_RS28835 PF04607 Region found in RelA / SpoT proteins LL041_RS28835 PF02824 TGS domain LL041_RS28840 PF16360 GTP-binding GTPase Middle Region LL041_RS28840 PF01926 50S ribosome-binding GTPase LL041_RS28840 PF13167 GTP-binding GTPase N-terminal LL041_RS28855 PF04183 IucA / IucC family LL041_RS28855 PF06276 Ferric iron reductase FhuF-like transporter LL041_RS28865 PF13307 Helicase C-terminal domain LL041_RS28870 PF01726 LexA DNA binding domain LL041_RS28870 PF00717 Peptidase S24-like LL041_RS28875 PF03477 ATP cone domain LL041_RS28880 PF08471 Class II vitamin B12-dependent ribonucleotide reductase LL041_RS28880 PF02867 Ribonucleotide reductase, barrel domain LL041_RS28905 PF07690 Major Facilitator Superfamily LL041_RS28910 PF16859 Tetracyclin repressor-like, C-terminal domain LL041_RS28910 PF00440 Bacterial regulatory proteins, tetR family LL041_RS28915 PF01351 Ribonuclease HII LL041_RS28930 PF09382 RQC domain LL041_RS28930 PF00271 Helicase conserved C-terminal domain LL041_RS28930 PF00570 HRDC domain LL041_RS28930 PF00270 DEAD/DEAH box helicase LL041_RS28930 PF16124 RecQ zinc-binding LL041_RS28940 PF03099 Biotin/lipoate A/B protein ligase family LL041_RS28940 PF00293 NUDIX domain LL041_RS28945 PF00005 ABC transporter LL041_RS28950 PF00392 Bacterial regulatory proteins, gntR family LL041_RS28950 PF07729 FCD domain LL041_RS28955 PF04539 Sigma-70 region 3 LL041_RS28955 PF04545 Sigma-70, region 4 LL041_RS28955 PF04542 Sigma-70 region 2 LL041_RS28955 PF00140 Sigma-70 factor, region 1.2 LL041_RS28960 PF00089 Trypsin LL041_RS28970 PF00204 DNA gyrase B LL041_RS28970 PF00986 DNA gyrase B subunit, carboxyl terminus LL041_RS28970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS28970 PF01751 Toprim domain LL041_RS28980 PF00474 Sodium:solute symporter family LL041_RS28985 PF12431 Transcriptional regulator LL041_RS28985 PF00072 Response regulator receiver domain LL041_RS28990 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LL041_RS28990 PF17203 Single cache domain 3 LL041_RS28990 PF00989 PAS fold LL041_RS28990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS29010 PF02492 CobW/HypB/UreG, nucleotide-binding domain LL041_RS29010 PF07683 Cobalamin synthesis protein cobW C-terminal domain LL041_RS29015 PF00521 DNA gyrase/topoisomerase IV, subunit A LL041_RS29015 PF03989 DNA gyrase C-terminal domain, beta-propeller LL041_RS29020 PF05193 Peptidase M16 inactive domain LL041_RS29020 PF00675 Insulinase (Peptidase family M16) LL041_RS29035 PF07729 FCD domain LL041_RS29035 PF00392 Bacterial regulatory proteins, gntR family LL041_RS29040 PF00381 PTS HPr component phosphorylation site LL041_RS29045 PF00583 Acetyltransferase (GNAT) family LL041_RS29045 PF13380 CoA binding domain LL041_RS29045 PF13607 Succinyl-CoA ligase like flavodoxin domain LL041_RS29060 PF00265 Thymidine kinase LL041_RS29080 PF09967 VWA-like domain (DUF2201) LL041_RS29080 PF13203 Putative metallopeptidase domain LL041_RS29095 PF01850 PIN domain LL041_RS29115 PF00581 Rhodanese-like domain LL041_RS29120 PF11268 Protein of unknown function (DUF3071) LL041_RS29125 PF04030 D-arabinono-1,4-lactone oxidase LL041_RS29125 PF01565 FAD binding domain LL041_RS29135 PF00762 Ferrochelatase LL041_RS29140 PF00459 Inositol monophosphatase family LL041_RS29150 PF00072 Response regulator receiver domain LL041_RS29150 PF00486 Transcriptional regulatory protein, C terminal LL041_RS29155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS29155 PF00672 HAMP domain LL041_RS29155 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS29180 PF00692 dUTPase LL041_RS29190 PF00005 ABC transporter LL041_RS29190 PF02687 FtsX-like permease family LL041_RS29190 PF12704 MacB-like periplasmic core domain LL041_RS29195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS29195 PF13493 Domain of unknown function (DUF4118) LL041_RS29195 PF00582 Universal stress protein family LL041_RS29195 PF00512 His Kinase A (phospho-acceptor) domain LL041_RS29195 PF02702 Osmosensitive K+ channel His kinase sensor domain LL041_RS29200 PF00486 Transcriptional regulatory protein, C terminal LL041_RS29200 PF00072 Response regulator receiver domain LL041_RS29215 PF02080 TrkA-C domain LL041_RS29215 PF02254 TrkA-N domain LL041_RS29220 PF02080 TrkA-C domain LL041_RS29220 PF02254 TrkA-N domain LL041_RS29225 PF00294 pfkB family carbohydrate kinase LL041_RS29230 PF13520 Amino acid permease LL041_RS29235 PF05958 tRNA (Uracil-5-)-methyltransferase LL041_RS29235 PF01938 TRAM domain LL041_RS29260 PF12823 Domain of unknown function (DUF3817) LL041_RS29260 PF03176 MMPL family LL041_RS29290 PF01752 Collagenase LL041_RS29290 PF08453 Peptidase family M9 N-terminal LL041_RS29295 PF02983 Alpha-lytic protease prodomain LL041_RS29300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS29300 PF03466 LysR substrate binding domain LL041_RS29325 PF00557 Metallopeptidase family M24 LL041_RS29330 PF01526 Tn3 transposase DDE domain LL041_RS29335 PF00561 alpha/beta hydrolase fold LL041_RS29345 PF01740 STAS domain LL041_RS29345 PF00916 Sulfate permease family LL041_RS29350 PF13411 MerR HTH family regulatory protein LL041_RS29360 PF01022 Bacterial regulatory protein, arsR family LL041_RS29370 PF01758 Sodium Bile acid symporter family LL041_RS29375 PF01022 Bacterial regulatory protein, arsR family LL041_RS29380 PF01451 Low molecular weight phosphotyrosine protein phosphatase LL041_RS29390 PF00561 alpha/beta hydrolase fold LL041_RS29395 PF00561 alpha/beta hydrolase fold LL041_RS29415 PF03664 Glycosyl hydrolase family 62 LL041_RS29415 PF00652 Ricin-type beta-trefoil lectin domain LL041_RS29420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS29420 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS29420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS29425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL041_RS29425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL041_RS29425 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LL041_RS29430 PF01144 Coenzyme A transferase LL041_RS29435 PF01144 Coenzyme A transferase LL041_RS29440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL041_RS29440 PF03466 LysR substrate binding domain LL041_RS29445 PF00108 Thiolase, N-terminal domain LL041_RS29445 PF02803 Thiolase, C-terminal domain LL041_RS29450 PF07690 Major Facilitator Superfamily LL041_RS29450 PF00083 Sugar (and other) transporter LL041_RS29455 PF01575 MaoC like domain LL041_RS29465 PF00202 Aminotransferase class-III LL041_RS29470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LL041_RS29480 PF00535 Glycosyl transferase family 2 LL041_RS29490 PF16221 winged helix-turn-helix LL041_RS29490 PF16254 Domain of unknown function (DUF4910) LL041_RS29490 PF09940 Domain of unknown function (DUF2172) LL041_RS29495 PF16363 GDP-mannose 4,6 dehydratase LL041_RS29505 PF00483 Nucleotidyl transferase LL041_RS29510 PF08484 C-methyltransferase C-terminal domain LL041_RS29510 PF08421 Putative zinc binding domain LL041_RS29515 PF00534 Glycosyl transferases group 1 LL041_RS29515 PF13439 Glycosyltransferase Family 4 LL041_RS29535 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS29535 PF00107 Zinc-binding dehydrogenase LL041_RS29540 PF00733 Asparagine synthase LL041_RS29540 PF13537 Glutamine amidotransferase domain LL041_RS29560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LL041_RS29560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LL041_RS29560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LL041_RS29565 PF02397 Bacterial sugar transferase LL041_RS29575 PF00005 ABC transporter LL041_RS29575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL041_RS29580 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS29580 PF12911 N-terminal TM domain of oligopeptide transport permease C LL041_RS29585 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS29590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL041_RS29600 PF07690 Major Facilitator Superfamily LL041_RS29605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LL041_RS29605 PF13378 Enolase C-terminal domain-like LL041_RS29610 PF00291 Pyridoxal-phosphate dependent enzyme LL041_RS29620 PF02142 MGS-like domain LL041_RS29620 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LL041_RS29620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL041_RS29630 PF00392 Bacterial regulatory proteins, gntR family LL041_RS29630 PF07729 FCD domain LL041_RS29635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL041_RS29640 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LL041_RS29640 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LL041_RS29640 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LL041_RS29645 PF01507 Phosphoadenosine phosphosulfate reductase family LL041_RS29650 PF01507 Phosphoadenosine phosphosulfate reductase family LL041_RS29655 PF00009 Elongation factor Tu GTP binding domain LL041_RS29665 PF00005 ABC transporter LL041_RS29675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LL041_RS29675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LL041_RS29690 PF00196 Bacterial regulatory proteins, luxR family LL041_RS29695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL041_RS29695 PF07730 Histidine kinase LL041_RS29700 PF07690 Major Facilitator Superfamily LL041_RS29715 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL041_RS29715 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LL041_RS29725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL041_RS29725 PF02770 Acyl-CoA dehydrogenase, middle domain LL041_RS29725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL041_RS29735 PF00698 Acyl transferase domain LL041_RS29735 PF03060 Nitronate monooxygenase LL041_RS29740 PF00550 Phosphopantetheine attachment site LL041_RS29740 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS29740 PF00698 Acyl transferase domain LL041_RS29740 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS29740 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS29740 PF14765 Polyketide synthase dehydratase LL041_RS29740 PF08659 KR domain LL041_RS29745 PF02801 Beta-ketoacyl synthase, C-terminal domain LL041_RS29745 PF00550 Phosphopantetheine attachment site LL041_RS29745 PF08240 Alcohol dehydrogenase GroES-like domain LL041_RS29745 PF00109 Beta-ketoacyl synthase, N-terminal domain LL041_RS29745 PF14765 Polyketide synthase dehydratase LL041_RS29745 PF00698 Acyl transferase domain LL041_RS29745 PF08659 KR domain LL041_RS29745 PF16197 Ketoacyl-synthetase C-terminal extension LL041_RS29760 PF00196 Bacterial regulatory proteins, luxR family LL041_RS29760 PF13426 PAS domain LL041_RS29765 PF01474 Class-II DAHP synthetase family LL041_RS29770 PF00425 chorismate binding enzyme LL041_RS29770 PF00117 Glutamine amidotransferase class-I LL041_RS29775 PF00857 Isochorismatase family LL041_RS29780 PF00106 short chain dehydrogenase LL041_RS29785 PF01979 Amidohydrolase family LL041_RS29795 PF00501 AMP-binding enzyme LL041_RS29795 PF13193 AMP-binding enzyme C-terminal domain LL041_RS29815 PF04954 Siderophore-interacting protein LL041_RS29815 PF08021 Siderophore-interacting FAD-binding domain LL041_RS29815 PF00005 ABC transporter LL041_RS29815 PF00664 ABC transporter transmembrane region LL041_RS29820 PF00005 ABC transporter LL041_RS29825 PF01361 Tautomerase enzyme LL041_RS29830 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LL041_RS29850 PF01613 Flavin reductase like domain LL041_RS29860 PF03704 Bacterial transcriptional activator domain LL041_RS29865 PF00486 Transcriptional regulatory protein, C terminal LL041_RS29865 PF00931 NB-ARC domain LL041_RS29865 PF03704 Bacterial transcriptional activator domain LL041_RS29870 PF00455 DeoR C terminal sensor domain LL041_RS29870 PF08220 DeoR-like helix-turn-helix domain LL041_RS29875 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LL041_RS29885 PF00248 Aldo/keto reductase family LL041_RS29890 PF03328 HpcH/HpaI aldolase/citrate lyase family LL041_RS29895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL041_RS29895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL041_RS29895 PF01842 ACT domain LL041_RS29900 PF01566 Natural resistance-associated macrophage protein LL041_RS29905 PF07690 Major Facilitator Superfamily LL041_RS29930 PF07702 UTRA domain LL041_RS29930 PF00392 Bacterial regulatory proteins, gntR family LL041_RS29935 PF01547 Bacterial extracellular solute-binding protein LL041_RS29940 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS29945 PF00528 Binding-protein-dependent transport system inner membrane component LL041_RS29950 PF00933 Glycosyl hydrolase family 3 N terminal domain LL041_RS29950 PF01915 Glycosyl hydrolase family 3 C-terminal domain LL041_RS29960 PF04472 Cell division protein SepF LL041_RS29990 PF00149 Calcineurin-like phosphoesterase LL041_RS30000 PF05496 Holliday junction DNA helicase RuvB P-loop domain LL041_RS30000 PF05491 RuvB C-terminal winged helix domain LL041_RS30000 PF17864 RuvB AAA lid domain LL041_RS30010 PF00999 Sodium/hydrogen exchanger family LL041_RS30025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LL041_RS30025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LL041_RS30035 PF00378 Enoyl-CoA hydratase/isomerase LL041_RS30170 PF00501 AMP-binding enzyme LL041_RS30170 PF14535 AMP-binding enzyme C-terminal domain