locus-tag	class	description
BJ961_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BJ961_RS00010	COG0592	DNA-directed DNA polymerase activity
BJ961_RS00015	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BJ961_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BJ961_RS00025	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
BJ961_RS00030	COG0187	DNA topoisomerase II activity
BJ961_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BJ961_RS00050	COG4249	Peptidase C14 caspase catalytic subunit p20
BJ961_RS00050	COG2319	Wd-40 repeat
BJ961_RS00110	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BJ961_RS00125	COG0705	Rhomboid family
BJ961_RS00150	COG3764	Sortase (surface protein transpeptidase)
BJ961_RS00155	COG3764	Sortase (surface protein transpeptidase)
BJ961_RS00160	COG0515	serine threonine protein kinase
BJ961_RS00165	COG0768	penicillin binding
BJ961_RS00180	COG1716	ATPase activity
BJ961_RS00235	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS00240	COG1309	transcriptional regulator
BJ961_RS00245	COG1522	sequence-specific DNA binding
BJ961_RS00275	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BJ961_RS00290	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS00290	COG3321	synthase
BJ961_RS00290	COG0604	alcohol dehydrogenase
BJ961_RS00305	COG0515	serine threonine protein kinase
BJ961_RS00310	COG0515	serine threonine protein kinase
BJ961_RS00330	COG0022	dehydrogenase e1 component
BJ961_RS00335	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJ961_RS00395	COG1362	aminopeptidase activity
BJ961_RS00400	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS00410	COG1741	Belongs to the pirin family
BJ961_RS00425	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BJ961_RS00485	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BJ961_RS00550	COG0366	Alpha amylase catalytic
BJ961_RS00555	COG1957	nucleoside hydrolase
BJ961_RS00560	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BJ961_RS00580	COG0583	DNA-binding transcription factor activity
BJ961_RS00635	COG0187	DNA topoisomerase II activity
BJ961_RS00645	COG1136	(ABC) transporter
BJ961_RS00645	COG0577	efflux transmembrane transporter activity
BJ961_RS00655	COG4585	Histidine kinase
BJ961_RS00670	COG1278	Cold shock
BJ961_RS00685	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BJ961_RS00700	COG0745	RESPONSE REGULATOR receiver
BJ961_RS00705	COG5002	protein histidine kinase activity
BJ961_RS00750	COG0513	Belongs to the DEAD box helicase family
BJ961_RS00755	COG1278	Cold shock
BJ961_RS00760	COG0667	Aldo Keto reductase
BJ961_RS00820	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BJ961_RS00825	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BJ961_RS00830	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
BJ961_RS00855	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BJ961_RS00860	COG0640	Transcriptional regulator
BJ961_RS00865	COG0798	PFAM Bile acid sodium symporter
BJ961_RS00870	COG2072	flavoprotein involved in K transport
BJ961_RS00875	COG0640	Transcriptional regulator
BJ961_RS00885	COG1234	tRNA 3'-trailer cleavage
BJ961_RS01015	COG0717	Belongs to the dCTP deaminase family
BJ961_RS01020	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BJ961_RS01035	COG0247	lactate metabolic process
BJ961_RS01035	COG2181	nitrate reductase activity
BJ961_RS01040	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJ961_RS01045	COG0443	Heat shock 70 kDa protein
BJ961_RS01050	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BJ961_RS01055	COG0484	heat shock protein binding
BJ961_RS01060	COG0789	Transcriptional regulator
BJ961_RS01065	COG4213	ABC transporter substrate-binding protein
BJ961_RS01090	COG0542	response to heat
BJ961_RS01125	COG4585	Histidine kinase
BJ961_RS01130	COG2197	response regulator
BJ961_RS01145	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BJ961_RS01150	COG0191	fructose-bisphosphate aldolase activity
BJ961_RS01155	COG0477	Major facilitator Superfamily
BJ961_RS01170	COG3844	kynureninase activity
BJ961_RS01190	COG4585	Histidine kinase
BJ961_RS01195	COG2197	response regulator
BJ961_RS01200	COG4585	Histidine kinase
BJ961_RS01205	COG2197	response regulator
BJ961_RS01245	COG3559	Exporter of polyketide antibiotics
BJ961_RS01250	COG1131	(ABC) transporter
BJ961_RS01265	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BJ961_RS01285	COG1802	Transcriptional regulator
BJ961_RS01290	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BJ961_RS01295	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJ961_RS01295	COG0515	serine threonine protein kinase
BJ961_RS01305	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BJ961_RS01310	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BJ961_RS01320	COG0583	DNA-binding transcription factor activity
BJ961_RS01325	COG2814	Major facilitator Superfamily
BJ961_RS01330	COG0456	acetyltransferase
BJ961_RS01345	COG1595	DNA-templated transcription, initiation
BJ961_RS01365	COG0640	Transcriptional regulator
BJ961_RS01370	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BJ961_RS01375	COG1316	TRANSCRIPTIONal
BJ961_RS01380	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BJ961_RS01385	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BJ961_RS01405	COG3655	Transcriptional regulator
BJ961_RS01415	COG3263	regulation of cellular component size
BJ961_RS01425	COG0475	glutathione-regulated potassium exporter activity
BJ961_RS01450	COG1234	tRNA 3'-trailer cleavage
BJ961_RS01505	COG1408	metallophosphoesterase
BJ961_RS01515	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BJ961_RS01525	COG0003	Pfam Anion-transporting ATPase
BJ961_RS01545	COG0596	Alpha beta hydrolase
BJ961_RS01555	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BJ961_RS01570	COG0494	nUDIX hydrolase
BJ961_RS01585	COG2267	carboxylic ester hydrolase activity
BJ961_RS01595	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BJ961_RS01600	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BJ961_RS01665	COG1111	helicase
BJ961_RS01665	COG1205	dead DEAH box helicase
BJ961_RS01670	COG1366	Belongs to the anti-sigma-factor antagonist family
BJ961_RS01675	COG2172	sigma factor antagonist activity
BJ961_RS01680	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
BJ961_RS01700	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BJ961_RS01700	COG1754	DNA topoisomerase type I activity
BJ961_RS01705	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BJ961_RS01710	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BJ961_RS01770	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BJ961_RS01770	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BJ961_RS01790	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BJ961_RS01795	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BJ961_RS01800	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BJ961_RS01805	COG0254	rRNA binding
BJ961_RS01815	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BJ961_RS01835	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS01855	COG0076	glutamate decarboxylase activity
BJ961_RS01875	COG0789	Transcriptional regulator
BJ961_RS01880	COG0393	Putative heavy-metal-binding
BJ961_RS01885	COG0586	Pfam SNARE associated Golgi protein
BJ961_RS01895	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BJ961_RS01900	COG2027	D-alanyl-D-alanine carboxypeptidase
BJ961_RS01910	COG0037	tRNA processing
BJ961_RS01925	COG0302	gtp cyclohydrolase
BJ961_RS01940	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BJ961_RS01980	COG0649	NAD binding
BJ961_RS02015	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BJ961_RS02020	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BJ961_RS02030	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BJ961_RS02055	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BJ961_RS02090	COG0739	heme binding
BJ961_RS02100	COG0477	Major facilitator Superfamily
BJ961_RS02130	COG2205	protein histidine kinase activity
BJ961_RS02135	COG0745	RESPONSE REGULATOR receiver
BJ961_RS02145	COG1595	DNA-templated transcription, initiation
BJ961_RS02150	COG1194	a g-specific adenine glycosylase
BJ961_RS02155	COG4585	Histidine kinase
BJ961_RS02175	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
BJ961_RS02195	COG0248	Ppx GppA phosphatase
BJ961_RS02200	COG1082	Xylose isomerase domain protein TIM barrel
BJ961_RS02210	COG0129	dihydroxy-acid dehydratase activity
BJ961_RS02215	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJ961_RS02215	COG0515	serine threonine protein kinase
BJ961_RS02240	COG0842	Transport permease protein
BJ961_RS02240	COG1129	ABC transporter
BJ961_RS02250	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BJ961_RS02260	COG0180	Tryptophanyl-tRNA synthetase
BJ961_RS02280	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJ961_RS02290	COG2223	nitrite transmembrane transporter activity
BJ961_RS02295	COG0123	including yeast histone deacetylase and acetoin utilization protein
BJ961_RS02345	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BJ961_RS02350	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BJ961_RS02355	COG0181	hydroxymethylbilane synthase activity
BJ961_RS02360	COG1648	precorrin-2 dehydrogenase activity
BJ961_RS02360	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BJ961_RS02370	COG0604	alcohol dehydrogenase
BJ961_RS02370	COG3321	synthase
BJ961_RS02390	COG0113	porphobilinogen synthase activity
BJ961_RS02405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJ961_RS02410	COG0018	arginyl-trna synthetase
BJ961_RS02415	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
BJ961_RS02435	COG1690	Belongs to the RtcB family
BJ961_RS02450	COG1742	UPF0060 membrane protein
BJ961_RS02455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS02515	COG2255	four-way junction helicase activity
BJ961_RS02530	COG2267	carboxylic ester hydrolase activity
BJ961_RS02555	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJ961_RS02570	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BJ961_RS02580	COG0713	ATP synthesis coupled electron transport
BJ961_RS02585	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BJ961_RS02595	COG1007	ATP synthesis coupled electron transport
BJ961_RS02705	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BJ961_RS02710	COG0406	alpha-ribazole phosphatase activity
BJ961_RS02720	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BJ961_RS02725	COG0785	Cytochrome C biogenesis protein
BJ961_RS02730	COG1333	cytochrome c biogenesis protein
BJ961_RS02735	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BJ961_RS02755	COG0596	Alpha beta hydrolase
BJ961_RS02770	COG0583	DNA-binding transcription factor activity
BJ961_RS02800	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BJ961_RS02805	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BJ961_RS02810	COG0163	prenyltransferase activity
BJ961_RS02820	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
BJ961_RS02825	COG1573	uracil-dna glycosylase
BJ961_RS02840	COG1301	dicarboxylic acid transport
BJ961_RS02845	COG1309	transcriptional regulator
BJ961_RS02855	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS02860	COG0183	Belongs to the thiolase family
BJ961_RS02870	COG2226	methyltransferase
BJ961_RS02875	COG1278	Cold shock
BJ961_RS02880	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
BJ961_RS02890	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
BJ961_RS02910	COG2226	methyltransferase
BJ961_RS02930	COG0242	peptide deformylase activity
BJ961_RS02945	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJ961_RS02950	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJ961_RS02955	COG0649	NAD binding
BJ961_RS02965	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BJ961_RS02970	COG1034	ATP synthesis coupled electron transport
BJ961_RS02975	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BJ961_RS02980	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJ961_RS02985	COG0839	Belongs to the complex I subunit 6 family
BJ961_RS02990	COG0713	ATP synthesis coupled electron transport
BJ961_RS02995	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BJ961_RS03005	COG1007	ATP synthesis coupled electron transport
BJ961_RS03010	COG0514	ATP-dependent DNA helicase (RecQ)
BJ961_RS03025	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BJ961_RS03055	COG1215	transferase activity, transferring glycosyl groups
BJ961_RS03065	COG0561	phosphatase activity
BJ961_RS03075	COG0142	geranyltranstransferase activity
BJ961_RS03085	COG1131	(ABC) transporter
BJ961_RS03120	COG0702	epimerase
BJ961_RS03125	COG1013	pyruvate-flavodoxin oxidoreductase activity
BJ961_RS03130	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BJ961_RS03130	COG0674	pyruvate-flavodoxin oxidoreductase activity
BJ961_RS03150	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJ961_RS03155	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJ961_RS03165	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BJ961_RS03170	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJ961_RS03180	COG0713	ATP synthesis coupled electron transport
BJ961_RS03185	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BJ961_RS03195	COG1007	ATP synthesis coupled electron transport
BJ961_RS03200	COG0501	Belongs to the peptidase M48B family
BJ961_RS03205	COG3304	Inner membrane component domain
BJ961_RS03215	COG2261	transglycosylase associated protein
BJ961_RS03220	COG1666	GTP binding
BJ961_RS03235	COG0702	epimerase
BJ961_RS03240	COG0402	S-adenosylhomocysteine deaminase activity
BJ961_RS03255	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BJ961_RS03260	COG2030	dehydratase
BJ961_RS03275	COG0477	Major facilitator Superfamily
BJ961_RS03285	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BJ961_RS03290	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BJ961_RS03295	COG0436	Aminotransferase
BJ961_RS03305	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BJ961_RS03310	COG0250	Participates in transcription elongation, termination and antitermination
BJ961_RS03315	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BJ961_RS03320	COG0081	regulation of translation
BJ961_RS03335	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BJ961_RS03340	COG0222	ribosome binding
BJ961_RS03345	COG0085	RNA polymerase activity
BJ961_RS03350	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BJ961_RS03365	COG0463	Glycosyl transferase, family 2
BJ961_RS03370	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BJ961_RS03375	COG0049	tRNA binding
BJ961_RS03380	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BJ961_RS03385	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BJ961_RS03405	COG2197	response regulator
BJ961_RS03445	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS03455	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BJ961_RS03515	COG0051	transcription antitermination factor activity, RNA binding
BJ961_RS03520	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BJ961_RS03525	COG0088	Forms part of the polypeptide exit tunnel
BJ961_RS03530	COG0089	rRNA binding
BJ961_RS03535	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BJ961_RS03540	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BJ961_RS03545	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BJ961_RS03550	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BJ961_RS03555	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BJ961_RS03560	COG0255	Belongs to the universal ribosomal protein uL29 family
BJ961_RS03565	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BJ961_RS03570	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BJ961_RS03575	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BJ961_RS03580	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BJ961_RS03585	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BJ961_RS03590	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BJ961_RS03595	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BJ961_RS03600	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BJ961_RS03605	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BJ961_RS03610	COG1841	ribosomal large subunit assembly
BJ961_RS03615	COG0200	Binds to the 23S rRNA
BJ961_RS03620	COG0201	protein transport
BJ961_RS03625	COG0563	adenylate kinase activity
BJ961_RS03635	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BJ961_RS03640	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BJ961_RS03645	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BJ961_RS03650	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BJ961_RS03655	COG0202	RNA polymerase activity
BJ961_RS03660	COG0203	ribosomal protein L17
BJ961_RS03665	COG0101	tRNA pseudouridine synthase activity
BJ961_RS03675	COG1215	transferase activity, transferring glycosyl groups
BJ961_RS03695	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BJ961_RS03700	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BJ961_RS03705	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BJ961_RS03725	COG0156	8-amino-7-oxononanoate synthase activity
BJ961_RS03730	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BJ961_RS03775	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BJ961_RS03805	COG2197	response regulator
BJ961_RS03815	COG1072	(Pantothenic acid kinase))
BJ961_RS03825	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BJ961_RS03830	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJ961_RS03850	COG0736	holo-[acyl-carrier-protein] synthase activity
BJ961_RS03855	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BJ961_RS03865	COG0802	atpase or kinase
BJ961_RS03890	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BJ961_RS03915	COG4941	Belongs to the sigma-70 factor family
BJ961_RS03925	COG0726	polysaccharide deacetylase
BJ961_RS03930	COG0726	polysaccharide deacetylase
BJ961_RS03935	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BJ961_RS03940	COG0459	protein refolding
BJ961_RS03955	COG4221	oxidoreductase activity
BJ961_RS03965	COG0583	DNA-binding transcription factor activity
BJ961_RS03980	COG1595	DNA-templated transcription, initiation
BJ961_RS03990	COG0516	GMP reductase activity
BJ961_RS04000	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BJ961_RS04025	COG0515	serine threonine protein kinase
BJ961_RS04035	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS04055	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BJ961_RS04055	COG0519	Catalyzes the synthesis of GMP from XMP
BJ961_RS04095	COG2197	response regulator
BJ961_RS04155	COG0739	heme binding
BJ961_RS04165	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJ961_RS04165	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJ961_RS04180	COG0714	Associated with various cellular activities
BJ961_RS04185	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BJ961_RS04190	COG3552	Protein containing von Willebrand factor type A (VWA) domain
BJ961_RS04200	COG0045	succinate-CoA ligase (ADP-forming) activity
BJ961_RS04230	COG0138	bifunctional purine biosynthesis protein purh
BJ961_RS04255	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BJ961_RS04270	COG0039	L-malate dehydrogenase activity
BJ961_RS04275	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS04285	COG0517	IMP dehydrogenase activity
BJ961_RS04285	COG4175	Glycine betaine
BJ961_RS04290	COG4176	ABC-type proline glycine betaine transport system permease component
BJ961_RS04300	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BJ961_RS04305	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJ961_RS04310	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJ961_RS04320	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BJ961_RS04325	COG0180	Tryptophanyl-tRNA synthetase
BJ961_RS04365	COG1686	Belongs to the peptidase S11 family
BJ961_RS04375	COG1408	metallophosphoesterase
BJ961_RS04380	COG1309	transcriptional regulator
BJ961_RS04410	COG1053	succinate dehydrogenase
BJ961_RS04420	COG2009	succinate dehydrogenase
BJ961_RS04450	COG1595	DNA-templated transcription, initiation
BJ961_RS04470	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJ961_RS04470	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJ961_RS04495	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BJ961_RS04505	COG1216	Glycosyl transferase, family 2
BJ961_RS04520	COG2089	acid synthase
BJ961_RS04535	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
BJ961_RS04535	COG1473	amidohydrolase
BJ961_RS04540	COG1744	ABC transporter substrate-binding protein PnrA-like
BJ961_RS04545	COG1744	ABC transporter substrate-binding protein PnrA-like
BJ961_RS04550	COG3845	ABC transporter
BJ961_RS04560	COG1079	Belongs to the binding-protein-dependent transport system permease family
BJ961_RS04595	COG2814	Major facilitator Superfamily
BJ961_RS04600	COG0583	DNA-binding transcription factor activity
BJ961_RS04610	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BJ961_RS04635	COG2205	protein histidine kinase activity
BJ961_RS04640	COG0745	RESPONSE REGULATOR receiver
BJ961_RS04645	COG1595	DNA-templated transcription, initiation
BJ961_RS04660	COG0515	serine threonine protein kinase
BJ961_RS04665	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS04670	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS04685	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BJ961_RS04710	COG4770	biotin carboxylase activity
BJ961_RS04720	COG0424	maF-like protein
BJ961_RS04735	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BJ961_RS04745	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
BJ961_RS04755	COG1024	Enoyl-CoA hydratase
BJ961_RS04765	COG2986	histidine ammonia-lyase
BJ961_RS04820	COG1064	alcohol dehydrogenase
BJ961_RS04835	COG1140	nitrate reductase beta subunit
BJ961_RS04850	COG0667	Aldo Keto reductase
BJ961_RS04865	COG1733	regulation of RNA biosynthetic process
BJ961_RS04880	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BJ961_RS04905	COG2255	four-way junction helicase activity
BJ961_RS04910	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BJ961_RS04925	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BJ961_RS04935	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BJ961_RS04950	COG4585	Histidine kinase
BJ961_RS04955	COG2197	response regulator
BJ961_RS04960	COG1136	(ABC) transporter
BJ961_RS04980	COG1331	Highly conserved protein containing a thioredoxin domain
BJ961_RS05000	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
BJ961_RS05015	COG0436	Aminotransferase
BJ961_RS05025	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BJ961_RS05040	COG1414	Transcriptional regulator
BJ961_RS05045	COG0251	oxidation-reduction process
BJ961_RS05050	COG2610	gluconate transmembrane transporter activity
BJ961_RS05095	COG2894	cell division
BJ961_RS05165	COG2226	methyltransferase
BJ961_RS05170	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BJ961_RS05175	COG0741	lytic transglycosylase activity
BJ961_RS05185	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJ961_RS05190	COG0450	alkyl hydroperoxide reductase
BJ961_RS05205	COG1136	(ABC) transporter
BJ961_RS05225	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BJ961_RS05240	COG0114	fumarate hydratase activity
BJ961_RS05245	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BJ961_RS05245	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BJ961_RS05270	COG0778	Nitroreductase
BJ961_RS05295	COG1722	exodeoxyribonuclease VII activity
BJ961_RS05300	COG1570	exodeoxyribonuclease VII activity
BJ961_RS05310	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BJ961_RS05325	COG0012	GTP binding
BJ961_RS05370	COG4221	oxidoreductase activity
BJ961_RS05385	COG0784	Response regulator, receiver
BJ961_RS05390	COG4251	negative regulation of phosphorylation
BJ961_RS05395	COG0745	RESPONSE REGULATOR receiver
BJ961_RS05430	COG2318	DinB family
BJ961_RS05505	COG1217	gtp-binding protein TYPA
BJ961_RS05510	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJ961_RS05515	COG4166	transmembrane transport
BJ961_RS05525	COG0444	Belongs to the ABC transporter superfamily
BJ961_RS05530	COG4608	Belongs to the ABC transporter superfamily
BJ961_RS05540	COG0601	transmembrane transport
BJ961_RS05545	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJ961_RS05550	COG0444	Belongs to the ABC transporter superfamily
BJ961_RS05555	COG4608	Belongs to the ABC transporter superfamily
BJ961_RS05650	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BJ961_RS05700	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BJ961_RS05710	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BJ961_RS05720	COG0519	Catalyzes the synthesis of GMP from XMP
BJ961_RS05725	COG1024	Enoyl-CoA hydratase
BJ961_RS05740	COG1595	DNA-templated transcription, initiation
BJ961_RS05750	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJ961_RS05755	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BJ961_RS05790	COG0598	Magnesium transport protein CorA
BJ961_RS05800	COG2814	Major facilitator Superfamily
BJ961_RS05810	COG0613	PHP domain protein
BJ961_RS05815	COG2095	MarC family integral membrane protein
BJ961_RS05825	COG1432	Conserved Protein
BJ961_RS05900	COG0596	Alpha beta hydrolase
BJ961_RS05925	COG0210	DNA helicase
BJ961_RS05935	COG2816	NAD+ diphosphatase activity
BJ961_RS05965	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BJ961_RS06020	COG3480	Lon protease (S16) C-terminal proteolytic domain
BJ961_RS06030	COG1615	UPF0182 protein
BJ961_RS06055	COG0753	catalase activity
BJ961_RS06065	COG0483	inositol monophosphate 1-phosphatase activity
BJ961_RS06075	COG2076	Multidrug Resistance protein
BJ961_RS06085	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BJ961_RS06095	COG2135	peptidase activity
BJ961_RS06105	COG1595	DNA-templated transcription, initiation
BJ961_RS06110	COG5662	AntiSigma factor
BJ961_RS06130	COG0242	peptide deformylase activity
BJ961_RS06140	COG2124	cytochrome p450
BJ961_RS06180	COG2188	Transcriptional regulator
BJ961_RS06185	COG2182	Extracellular solute-binding protein
BJ961_RS06190	COG1175	transmembrane transport
BJ961_RS06195	COG0395	ABC-type sugar transport system, permease component
BJ961_RS06200	COG1472	Belongs to the glycosyl hydrolase 3 family
BJ961_RS06205	COG0363	glucosamine-6-phosphate deaminase activity
BJ961_RS06220	COG1597	lipid kinase activity
BJ961_RS06260	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BJ961_RS06265	COG0142	geranyltranstransferase activity
BJ961_RS06300	COG4106	trans-aconitate 2-methyltransferase activity
BJ961_RS06305	COG1126	abc transporter atp-binding protein
BJ961_RS06320	COG0281	malic enzyme
BJ961_RS06325	COG0604	alcohol dehydrogenase
BJ961_RS06360	COG0567	Dehydrogenase, E1 component
BJ961_RS06360	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJ961_RS06365	COG2205	protein histidine kinase activity
BJ961_RS06370	COG0745	RESPONSE REGULATOR receiver
BJ961_RS06380	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BJ961_RS06425	COG0791	NLP P60 protein
BJ961_RS06465	COG2205	protein histidine kinase activity
BJ961_RS06480	COG1793	dna ligase
BJ961_RS06480	COG3285	dna ligase
BJ961_RS06485	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BJ961_RS06495	COG1131	(ABC) transporter
BJ961_RS06500	COG1309	transcriptional regulator
BJ961_RS06515	COG3467	pyridoxamine 5'-phosphate
BJ961_RS06530	COG2867	negative regulation of translational initiation
BJ961_RS06535	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BJ961_RS06540	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJ961_RS06545	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJ961_RS06550	COG0662	Cupin 2, conserved barrel domain protein
BJ961_RS06555	COG2329	Antibiotic biosynthesis monooxygenase
BJ961_RS06560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJ961_RS06580	COG0346	lactoylglutathione lyase activity
BJ961_RS06615	COG0745	RESPONSE REGULATOR receiver
BJ961_RS06620	COG0018	arginyl-trna synthetase
BJ961_RS06620	COG0018	arginyl-trna synthetase
BJ961_RS06625	COG0019	diaminopimelate decarboxylase activity
BJ961_RS06630	COG0460	homoserine dehydrogenase
BJ961_RS06635	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BJ961_RS06640	COG0083	homoserine kinase activity
BJ961_RS06650	COG1316	TRANSCRIPTIONal
BJ961_RS06655	COG0254	rRNA binding
BJ961_RS06660	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BJ961_RS06665	COG2890	protein-(glutamine-N5) methyltransferase activity
BJ961_RS06675	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BJ961_RS06680	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BJ961_RS06685	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJ961_RS06700	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BJ961_RS06705	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BJ961_RS06710	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BJ961_RS06715	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BJ961_RS06720	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BJ961_RS06725	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BJ961_RS06730	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BJ961_RS06745	COG2197	response regulator
BJ961_RS06750	COG4585	Histidine kinase
BJ961_RS06785	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS06800	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
BJ961_RS06835	COG1131	(ABC) transporter
BJ961_RS06855	COG0183	Belongs to the thiolase family
BJ961_RS06875	COG0745	RESPONSE REGULATOR receiver
BJ961_RS06880	COG2205	protein histidine kinase activity
BJ961_RS06925	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJ961_RS06925	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJ961_RS06960	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BJ961_RS06965	COG0857	belongs to the CobB CobQ family
BJ961_RS06965	COG0280	phosphate acetyltransferase
BJ961_RS06970	COG0205	6-phosphofructokinase activity
BJ961_RS06980	COG0395	ABC-type sugar transport system, permease component
BJ961_RS06990	COG1653	transport
BJ961_RS07005	COG4565	transcriptional regulatory protein
BJ961_RS07010	COG3290	protein histidine kinase activity
BJ961_RS07015	COG1301	dicarboxylic acid transport
BJ961_RS07035	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BJ961_RS07040	COG3281	Trehalose synthase
BJ961_RS07050	COG0366	Alpha amylase catalytic
BJ961_RS07055	COG0058	SHG alpha-glucan phosphorylase activity
BJ961_RS07075	COG1132	(ABC) transporter
BJ961_RS07080	COG1132	(ABC) transporter
BJ961_RS07085	COG1132	(ABC) transporter
BJ961_RS07090	COG1132	(ABC) transporter
BJ961_RS07095	COG1131	(ABC) transporter
BJ961_RS07105	COG4585	Histidine kinase
BJ961_RS07110	COG2197	response regulator
BJ961_RS07125	COG1376	ErfK ybiS ycfS ynhG family protein
BJ961_RS07150	COG0789	Transcriptional regulator
BJ961_RS07175	COG0477	Major facilitator Superfamily
BJ961_RS07180	COG1760	l-serine dehydratase
BJ961_RS07185	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BJ961_RS07190	COG0509	glycine decarboxylation via glycine cleavage system
BJ961_RS07195	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BJ961_RS07215	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJ961_RS07230	COG0444	Belongs to the ABC transporter superfamily
BJ961_RS07235	COG4608	Belongs to the ABC transporter superfamily
BJ961_RS07240	COG2860	membrane
BJ961_RS07250	COG1309	transcriptional regulator
BJ961_RS07275	COG0482	sulfurtransferase activity
BJ961_RS07290	COG1611	Belongs to the LOG family
BJ961_RS07295	COG4221	oxidoreductase activity
BJ961_RS07305	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BJ961_RS07325	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BJ961_RS07330	COG0154	amidase activity
BJ961_RS07340	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BJ961_RS07345	COG2409	Drug exporters of the RND superfamily
BJ961_RS07350	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJ961_RS07365	COG2197	response regulator
BJ961_RS07375	COG2133	pyrroloquinoline quinone binding
BJ961_RS07380	COG0667	Aldo Keto reductase
BJ961_RS07390	COG5001	Diguanylate cyclase
BJ961_RS07400	COG0440	acetolactate synthase activity
BJ961_RS07405	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BJ961_RS07410	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BJ961_RS07415	COG0477	Major facilitator Superfamily
BJ961_RS07430	COG0506	proline dehydrogenase activity
BJ961_RS07435	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS07445	COG0473	3-isopropylmalate dehydrogenase activity
BJ961_RS07450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BJ961_RS07455	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BJ961_RS07475	COG2353	YceI-like domain
BJ961_RS07480	COG5492	domain, Protein
BJ961_RS07485	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BJ961_RS07505	COG2018	Roadblock/LC7 domain
BJ961_RS07525	COG2018	Roadblock/LC7 domain
BJ961_RS07530	COG5002	protein histidine kinase activity
BJ961_RS07540	COG0179	Fumarylacetoacetate (FAA) hydrolase
BJ961_RS07545	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BJ961_RS07585	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BJ961_RS07635	COG1414	Transcriptional regulator
BJ961_RS07640	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BJ961_RS07645	COG0066	3-isopropylmalate dehydratase activity
BJ961_RS07655	COG0776	regulation of translation
BJ961_RS07665	COG1920	GTP binding
BJ961_RS07675	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BJ961_RS07680	COG1181	Belongs to the D-alanine--D-alanine ligase family
BJ961_RS07700	COG0351	phosphomethylpyrimidine kinase
BJ961_RS07705	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BJ961_RS07710	COG1461	Dihydroxyacetone kinase
BJ961_RS07720	COG0742	ribosomal rna small subunit methyltransferase
BJ961_RS07725	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BJ961_RS07740	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BJ961_RS07745	COG0571	ribonuclease III activity
BJ961_RS07750	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BJ961_RS07755	COG1733	regulation of RNA biosynthetic process
BJ961_RS07765	COG1254	Belongs to the acylphosphatase family
BJ961_RS07780	COG0477	Major facilitator Superfamily
BJ961_RS07785	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BJ961_RS07790	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS07795	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BJ961_RS07810	COG0596	Alpha beta hydrolase
BJ961_RS07815	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS07820	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BJ961_RS07865	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BJ961_RS07875	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BJ961_RS07890	COG0228	four-way junction DNA binding
BJ961_RS07895	COG1837	Belongs to the UPF0109 family
BJ961_RS07900	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BJ961_RS07905	COG0336	Belongs to the RNA methyltransferase TrmD family
BJ961_RS07910	COG0335	large ribosomal subunit rRNA binding
BJ961_RS07925	COG0681	Belongs to the peptidase S26 family
BJ961_RS07945	COG0792	nuclease activity
BJ961_RS07960	COG1191	sigma factor activity
BJ961_RS07975	COG0052	Belongs to the universal ribosomal protein uS2 family
BJ961_RS07980	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BJ961_RS07985	COG0528	UMP kinase activity
BJ961_RS07990	COG0233	cytoplasmic translational termination
BJ961_RS07995	COG0575	Belongs to the CDS family
BJ961_RS08000	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BJ961_RS08010	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BJ961_RS08015	COG3842	ATPase activity
BJ961_RS08045	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BJ961_RS08055	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS08070	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BJ961_RS08080	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BJ961_RS08110	COG3842	ATPase activity
BJ961_RS08115	COG1176	ABC-type spermidine putrescine transport system, permease component I
BJ961_RS08120	COG1177	transmembrane transport
BJ961_RS08125	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJ961_RS08155	COG2508	Transcriptional regulator
BJ961_RS08160	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS08180	COG4209	transmembrane transport
BJ961_RS08185	COG0395	ABC-type sugar transport system, permease component
BJ961_RS08210	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BJ961_RS08215	COG0750	zinc metalloprotease
BJ961_RS08220	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BJ961_RS08235	COG0442	prolyl-tRNA aminoacylation
BJ961_RS08255	COG0779	Required for maturation of 30S ribosomal subunits
BJ961_RS08270	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BJ961_RS08280	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BJ961_RS08290	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BJ961_RS08295	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BJ961_RS08310	COG4608	Belongs to the ABC transporter superfamily
BJ961_RS08320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJ961_RS08325	COG0601	transmembrane transport
BJ961_RS08330	COG0747	negative chemotaxis
BJ961_RS08335	COG0455	bacterial-type flagellum organization
BJ961_RS08350	COG3266	domain, Protein
BJ961_RS08405	COG1674	ftsk spoiiie
BJ961_RS08420	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BJ961_RS08425	COG1185	polyribonucleotide nucleotidyltransferase activity
BJ961_RS08430	COG0612	Peptidase, M16
BJ961_RS08435	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BJ961_RS08455	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
BJ961_RS08460	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJ961_RS08465	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BJ961_RS08495	COG2208	phosphoserine phosphatase activity
BJ961_RS08495	COG2770	Histidine kinase
BJ961_RS08500	COG0784	Response regulator, receiver
BJ961_RS08500	COG2205	protein histidine kinase activity
BJ961_RS08510	COG1674	ftsk spoiiie
BJ961_RS08520	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BJ961_RS08530	COG1058	Belongs to the CinA family
BJ961_RS08530	COG1546	Belongs to the CinA family
BJ961_RS08535	COG1396	sequence-specific DNA binding
BJ961_RS08540	COG0783	Belongs to the Dps family
BJ961_RS08555	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BJ961_RS08560	COG1201	RNA secondary structure unwinding
BJ961_RS08565	COG1917	Cupin 2, conserved barrel domain protein
BJ961_RS08565	COG2207	Transcriptional regulator
BJ961_RS08590	COG0628	permease
BJ961_RS08600	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BJ961_RS08610	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BJ961_RS08625	COG0765	amino acid transport
BJ961_RS08630	COG0765	amino acid transport
BJ961_RS08635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJ961_RS08640	COG1126	abc transporter atp-binding protein
BJ961_RS08645	COG0745	RESPONSE REGULATOR receiver
BJ961_RS08650	COG2205	protein histidine kinase activity
BJ961_RS08675	COG3851	Histidine kinase
BJ961_RS08680	COG2197	response regulator
BJ961_RS08685	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BJ961_RS08705	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BJ961_RS08715	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BJ961_RS08720	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BJ961_RS08730	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BJ961_RS08760	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BJ961_RS08765	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BJ961_RS08770	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BJ961_RS08785	COG0588	phosphoglycerate mutase activity
BJ961_RS08805	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BJ961_RS08840	COG2186	Transcriptional regulator
BJ961_RS08845	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BJ961_RS08860	COG0187	DNA topoisomerase II activity
BJ961_RS08885	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BJ961_RS08890	COG4565	transcriptional regulatory protein
BJ961_RS08895	COG3290	protein histidine kinase activity
BJ961_RS08910	COG0372	Belongs to the citrate synthase family
BJ961_RS08930	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BJ961_RS08935	COG0612	Peptidase, M16
BJ961_RS08950	COG1802	Transcriptional regulator
BJ961_RS08955	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJ961_RS08960	COG0045	succinate-CoA ligase (ADP-forming) activity
BJ961_RS08960	COG1042	CoA-binding domain protein
BJ961_RS08960	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJ961_RS08975	COG1435	thymidine kinase activity
BJ961_RS08980	COG4585	Histidine kinase
BJ961_RS08985	COG2197	response regulator
BJ961_RS08995	COG0577	efflux transmembrane transporter activity
BJ961_RS08995	COG1136	(ABC) transporter
BJ961_RS09035	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BJ961_RS09050	COG0745	RESPONSE REGULATOR receiver
BJ961_RS09055	COG2205	protein histidine kinase activity
BJ961_RS09080	COG0756	dUTP diphosphatase activity
BJ961_RS09090	COG1136	(ABC) transporter
BJ961_RS09090	COG4591	ABC-type transport system involved in lipoprotein release permease component
BJ961_RS09120	COG0569	domain protein
BJ961_RS09125	COG0531	amino acid
BJ961_RS09130	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BJ961_RS09140	COG3654	unkown
BJ961_RS09215	COG3693	PFAM glycoside hydrolase, family 10
BJ961_RS09250	COG1316	TRANSCRIPTIONal
BJ961_RS09290	COG4948	Mandelate Racemase Muconate Lactonizing
BJ961_RS09295	COG0395	ABC-type sugar transport system, permease component
BJ961_RS09300	COG1175	transmembrane transport
BJ961_RS09315	COG2188	Transcriptional regulator
BJ961_RS09320	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS09345	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS09415	COG1053	succinate dehydrogenase
BJ961_RS09415	COG3976	FMN-binding domain protein
BJ961_RS09415	COG0431	NADPH-dependent FMN reductase
BJ961_RS09420	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
BJ961_RS09430	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BJ961_RS09445	COG1215	transferase activity, transferring glycosyl groups
BJ961_RS09455	COG4310	Domain of unknown function (DUF2172)
BJ961_RS09470	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BJ961_RS09480	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS09525	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BJ961_RS09530	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BJ961_RS09535	COG2197	response regulator
BJ961_RS09540	COG4585	Histidine kinase
BJ961_RS09545	COG2409	Drug exporters of the RND superfamily
BJ961_RS09560	COG0477	Major facilitator Superfamily
BJ961_RS09565	COG1122	ATPase activity
BJ961_RS09575	COG1930	Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
BJ961_RS09580	COG0310	cobalt ion transport
BJ961_RS09585	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BJ961_RS09600	COG0247	lactate metabolic process
BJ961_RS09600	COG0277	FAD linked oxidase domain protein
BJ961_RS09605	COG1799	cell septum assembly
BJ961_RS09635	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BJ961_RS09645	COG2255	four-way junction helicase activity
BJ961_RS09655	COG0475	glutathione-regulated potassium exporter activity
BJ961_RS09680	COG2235	arginine
BJ961_RS09685	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BJ961_RS09690	COG0531	amino acid
BJ961_RS09700	COG1024	Enoyl-CoA hydratase
BJ961_RS09705	COG1902	pentaerythritol trinitrate reductase activity
BJ961_RS09770	COG5635	Nacht domain
BJ961_RS09770	COG2319	Wd-40 repeat
BJ961_RS09800	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJ961_RS09800	COG0515	serine threonine protein kinase
BJ961_RS09850	COG0210	DNA helicase
BJ961_RS09855	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BJ961_RS09865	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BJ961_RS09875	COG1653	transport
BJ961_RS09880	COG1175	transmembrane transport
BJ961_RS09885	COG0395	ABC-type sugar transport system, permease component
BJ961_RS09890	COG1940	carbohydrate kinase activity
BJ961_RS09895	COG4213	ABC transporter substrate-binding protein
BJ961_RS09905	COG4214	carbohydrate transport
BJ961_RS09910	COG3979	chitinase
BJ961_RS09915	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BJ961_RS09920	COG0531	amino acid
BJ961_RS09935	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS09935	COG1024	Enoyl-CoA hydratase
BJ961_RS09940	COG0183	Belongs to the thiolase family
BJ961_RS09945	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BJ961_RS09960	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BJ961_RS09975	COG4555	ABC transporter
BJ961_RS09990	COG0076	glutamate decarboxylase activity
BJ961_RS10015	COG1472	Belongs to the glycosyl hydrolase 3 family
BJ961_RS10050	COG0446	pyridine nucleotide-disulphide oxidoreductase
BJ961_RS10060	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
BJ961_RS10065	COG3253	May function as heme-dependent peroxidase
BJ961_RS10080	COG3220	belongs to the UPF0276 family
BJ961_RS10105	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJ961_RS10105	COG0723	plastoquinol--plastocyanin reductase activity
BJ961_RS10145	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BJ961_RS10150	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BJ961_RS10155	COG2205	protein histidine kinase activity
BJ961_RS10160	COG0745	RESPONSE REGULATOR receiver
BJ961_RS10170	COG1174	glycine betaine transport
BJ961_RS10175	COG1174	glycine betaine transport
BJ961_RS10210	COG1309	transcriptional regulator
BJ961_RS10230	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BJ961_RS10240	COG3173	Aminoglycoside phosphotransferase
BJ961_RS10300	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BJ961_RS10310	COG2409	Drug exporters of the RND superfamily
BJ961_RS10320	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJ961_RS10325	COG1116	anion transmembrane transporter activity
BJ961_RS10345	COG0529	Catalyzes the synthesis of activated sulfate
BJ961_RS10350	COG0175	sulfate reduction
BJ961_RS10360	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BJ961_RS10380	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS10420	COG1846	Transcriptional regulator
BJ961_RS10420	COG1940	carbohydrate kinase activity
BJ961_RS10435	COG4977	sequence-specific DNA binding
BJ961_RS10435	COG1917	Cupin 2, conserved barrel domain protein
BJ961_RS10465	COG2272	Belongs to the type-B carboxylesterase lipase family
BJ961_RS10495	COG0714	Associated with various cellular activities
BJ961_RS10510	COG2040	homocysteine
BJ961_RS10525	COG2197	response regulator
BJ961_RS10550	COG0277	FAD linked oxidase domain protein
BJ961_RS10570	COG1162	GTPase activity
BJ961_RS10580	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BJ961_RS10600	COG0028	Belongs to the TPP enzyme family
BJ961_RS10620	COG1802	Transcriptional regulator
BJ961_RS10625	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BJ961_RS10635	COG2197	response regulator
BJ961_RS10640	COG3851	Histidine kinase
BJ961_RS10670	COG3835	regulator
BJ961_RS10685	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BJ961_RS10690	COG2252	PERMEase
BJ961_RS10715	COG0726	polysaccharide deacetylase
BJ961_RS10725	COG2192	nodulation
BJ961_RS10740	COG0859	PFAM glycosyl transferase family 9
BJ961_RS10745	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS10750	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS10755	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BJ961_RS10830	COG1295	ribonuclease BN
BJ961_RS10845	COG2197	response regulator
BJ961_RS10850	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BJ961_RS10855	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS10890	COG3960	tartronate-semialdehyde synthase activity
BJ961_RS10905	COG0753	catalase activity
BJ961_RS10910	COG2084	Dehydrogenase
BJ961_RS10915	COG3622	Belongs to the hyi family
BJ961_RS10935	COG2351	hydroxyisourate hydrolase activity
BJ961_RS10945	COG2233	PERMEase
BJ961_RS10955	COG2233	PERMEase
BJ961_RS10975	COG0406	alpha-ribazole phosphatase activity
BJ961_RS10980	COG0436	Aminotransferase
BJ961_RS11000	COG4264	IucA IucC family
BJ961_RS11025	COG1162	GTPase activity
BJ961_RS11080	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJ961_RS11115	COG0431	NADPH-dependent FMN reductase
BJ961_RS11135	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BJ961_RS11140	COG2226	methyltransferase
BJ961_RS11145	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BJ961_RS11165	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
BJ961_RS11170	COG1063	alcohol dehydrogenase
BJ961_RS11180	COG0076	glutamate decarboxylase activity
BJ961_RS11205	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
BJ961_RS11215	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BJ961_RS11220	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BJ961_RS11220	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BJ961_RS11230	COG1414	Transcriptional regulator
BJ961_RS11235	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BJ961_RS11240	COG4266	Belongs to the allantoicase family
BJ961_RS11245	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS11260	COG2197	response regulator
BJ961_RS11270	COG2188	Transcriptional regulator
BJ961_RS11290	COG1940	carbohydrate kinase activity
BJ961_RS11300	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BJ961_RS11315	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS11320	COG3246	L-lysine catabolic process to acetate
BJ961_RS11335	COG0431	NADPH-dependent FMN reductase
BJ961_RS11375	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJ961_RS11405	COG0475	glutathione-regulated potassium exporter activity
BJ961_RS11430	COG2205	protein histidine kinase activity
BJ961_RS11435	COG0745	RESPONSE REGULATOR receiver
BJ961_RS11445	COG0405	Gamma-glutamyltransferase
BJ961_RS11450	COG0542	response to heat
BJ961_RS11470	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BJ961_RS11485	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BJ961_RS11490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS11495	COG1953	Uracil, thiamine, allantoin
BJ961_RS11505	COG0095	Lipoate-protein ligase
BJ961_RS11510	COG3851	Histidine kinase
BJ961_RS11555	COG2205	protein histidine kinase activity
BJ961_RS11560	COG0745	RESPONSE REGULATOR receiver
BJ961_RS11585	COG1073	alpha beta
BJ961_RS11610	COG0662	Cupin 2, conserved barrel domain protein
BJ961_RS11615	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BJ961_RS11625	COG0561	phosphatase activity
BJ961_RS11635	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJ961_RS11640	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BJ961_RS11665	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BJ961_RS11670	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BJ961_RS11685	COG1609	Transcriptional regulator
BJ961_RS11695	COG1175	transmembrane transport
BJ961_RS11700	COG3833	ABC-type maltose transport systems, permease component
BJ961_RS11705	COG0366	Alpha amylase catalytic
BJ961_RS11795	COG0693	protein deglycase activity
BJ961_RS11820	COG0656	L-ascorbic acid biosynthetic process
BJ961_RS11840	COG4974	Belongs to the 'phage' integrase family
BJ961_RS11865	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJ961_RS11875	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJ961_RS11915	COG3328	transposase activity
BJ961_RS11940	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BJ961_RS11950	COG0483	inositol monophosphate 1-phosphatase activity
BJ961_RS11960	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BJ961_RS11975	COG0601	transmembrane transport
BJ961_RS11980	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJ961_RS11990	COG1124	(ABC) transporter
BJ961_RS12010	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BJ961_RS12015	COG0494	nUDIX hydrolase
BJ961_RS12025	COG1929	Belongs to the glycerate kinase type-1 family
BJ961_RS12035	COG0688	phosphatidylethanolamine metabolic process
BJ961_RS12040	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS12050	COG2301	Belongs to the HpcH HpaI aldolase family
BJ961_RS12055	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJ961_RS12055	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJ961_RS12060	COG0604	alcohol dehydrogenase
BJ961_RS12070	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS12080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJ961_RS12080	COG0456	acetyltransferase
BJ961_RS12090	COG0596	Alpha beta hydrolase
BJ961_RS12125	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BJ961_RS12130	COG2362	D-Aminopeptidase
BJ961_RS12135	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BJ961_RS12140	COG0823	Involved in the tonB-independent uptake of proteins
BJ961_RS12140	COG4946	Tricorn protease homolog
BJ961_RS12140	COG1506	peptidase
BJ961_RS12145	COG1619	proteins homologs of microcin C7 resistance protein MccF
BJ961_RS12175	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS12190	COG1793	dna ligase
BJ961_RS12190	COG3285	dna ligase
BJ961_RS12255	COG1597	lipid kinase activity
BJ961_RS12275	COG0693	protein deglycase activity
BJ961_RS12285	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BJ961_RS12340	COG0531	amino acid
BJ961_RS12370	COG1140	nitrate reductase beta subunit
BJ961_RS12400	COG2154	pterin-4-alpha-carbinolamine dehydratase
BJ961_RS12405	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BJ961_RS12405	COG4106	trans-aconitate 2-methyltransferase activity
BJ961_RS12410	COG3401	FG-GAP repeat protein
BJ961_RS12425	COG4733	cellulase activity
BJ961_RS12425	COG5297	Belongs to the glycosyl hydrolase family 6
BJ961_RS12430	COG5297	Belongs to the glycosyl hydrolase family 6
BJ961_RS12440	COG4221	oxidoreductase activity
BJ961_RS12445	COG0656	L-ascorbic acid biosynthetic process
BJ961_RS12465	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BJ961_RS12475	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BJ961_RS12480	COG3383	formate dehydrogenase (NAD+) activity
BJ961_RS12485	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BJ961_RS12500	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BJ961_RS12515	COG1129	ABC transporter
BJ961_RS12520	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJ961_RS12530	COG0673	inositol 2-dehydrogenase activity
BJ961_RS12585	COG2223	nitrite transmembrane transporter activity
BJ961_RS12595	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJ961_RS12605	COG0045	succinate-CoA ligase (ADP-forming) activity
BJ961_RS12615	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS12630	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BJ961_RS12635	COG1609	Transcriptional regulator
BJ961_RS12645	COG1175	transmembrane transport
BJ961_RS12655	COG1472	Belongs to the glycosyl hydrolase 3 family
BJ961_RS12665	COG0129	dihydroxy-acid dehydratase activity
BJ961_RS12715	COG2182	Extracellular solute-binding protein
BJ961_RS12720	COG1175	transmembrane transport
BJ961_RS12725	COG0395	ABC-type sugar transport system, permease component
BJ961_RS12730	COG2723	6-phospho-beta-galactosidase activity
BJ961_RS12770	COG0300	oxidoreductase activity
BJ961_RS12780	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BJ961_RS12785	COG3766	membrane
BJ961_RS12850	COG0747	negative chemotaxis
BJ961_RS12865	COG1309	transcriptional regulator
BJ961_RS12875	COG1183	phosphatidylcholine synthase activity
BJ961_RS12890	COG0297	glycogen (starch) synthase activity
BJ961_RS12910	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BJ961_RS12925	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BJ961_RS12930	COG0166	Belongs to the GPI family
BJ961_RS12945	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BJ961_RS12965	COG1486	melibiose metabolic process
BJ961_RS12975	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BJ961_RS13000	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJ961_RS13015	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJ961_RS13020	COG3938	Belongs to the proline racemase family
BJ961_RS13030	COG0515	serine threonine protein kinase
BJ961_RS13035	COG1132	(ABC) transporter
BJ961_RS13040	COG1132	(ABC) transporter
BJ961_RS13045	COG2197	response regulator
BJ961_RS13060	COG3552	Protein containing von Willebrand factor type A (VWA) domain
BJ961_RS13075	COG0477	Major facilitator Superfamily
BJ961_RS13105	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJ961_RS13110	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BJ961_RS13115	COG3485	protocatechuate 3,4-dioxygenase
BJ961_RS13120	COG3485	protocatechuate 3,4-dioxygenase
BJ961_RS13125	COG0183	Belongs to the thiolase family
BJ961_RS13145	COG1470	cell adhesion involved in biofilm formation
BJ961_RS13155	COG1793	dna ligase
BJ961_RS13205	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BJ961_RS13210	COG0488	(ABC) transporter
BJ961_RS13240	COG1515	deoxyribonuclease V activity
BJ961_RS13250	COG3268	Saccharopine dehydrogenase
BJ961_RS13255	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJ961_RS13260	COG0183	Belongs to the thiolase family
BJ961_RS13265	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS13265	COG1024	Enoyl-CoA hydratase
BJ961_RS13270	COG0789	Transcriptional regulator
BJ961_RS13275	COG1113	amino acid transport
BJ961_RS13295	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BJ961_RS13310	COG0488	(ABC) transporter
BJ961_RS13315	COG2183	response to ionizing radiation
BJ961_RS13330	COG4977	sequence-specific DNA binding
BJ961_RS13340	COG1024	Enoyl-CoA hydratase
BJ961_RS13350	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BJ961_RS13390	COG1134	teichoic acid transport
BJ961_RS13395	COG1562	ergosterol biosynthetic process
BJ961_RS13410	COG1233	COG1233 Phytoene dehydrogenase and related
BJ961_RS13420	COG1657	PFAM Prenyltransferase squalene oxidase
BJ961_RS13435	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BJ961_RS13460	COG2365	Tyrosine phosphatase family
BJ961_RS13490	COG1024	Enoyl-CoA hydratase
BJ961_RS13490	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS13515	COG2814	Major facilitator Superfamily
BJ961_RS13545	COG1902	pentaerythritol trinitrate reductase activity
BJ961_RS13555	COG1309	transcriptional regulator
BJ961_RS13575	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJ961_RS13580	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS13585	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS13590	COG0183	Belongs to the thiolase family
BJ961_RS13595	COG1024	Enoyl-CoA hydratase
BJ961_RS13595	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS13600	COG1022	Amp-dependent synthetase and ligase
BJ961_RS13645	COG1063	alcohol dehydrogenase
BJ961_RS13650	COG0156	8-amino-7-oxononanoate synthase activity
BJ961_RS13655	COG0583	DNA-binding transcription factor activity
BJ961_RS13675	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BJ961_RS13675	COG2111	Na H antiporter
BJ961_RS13680	COG1006	Multisubunit Na H antiporter MnhC subunit
BJ961_RS13685	COG0651	ATP synthesis coupled electron transport
BJ961_RS13700	COG1320	monovalent cation:proton antiporter activity
BJ961_RS13715	COG0174	glutamine synthetase
BJ961_RS13740	COG2267	carboxylic ester hydrolase activity
BJ961_RS13745	COG0183	Belongs to the thiolase family
BJ961_RS13750	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS13790	COG2188	Transcriptional regulator
BJ961_RS13795	COG3962	Belongs to the TPP enzyme family
BJ961_RS13800	COG3718	enzyme involved in inositol metabolism
BJ961_RS13810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJ961_RS13835	COG0673	inositol 2-dehydrogenase activity
BJ961_RS13840	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS13850	COG0673	inositol 2-dehydrogenase activity
BJ961_RS13855	COG2186	Transcriptional regulator
BJ961_RS13865	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BJ961_RS13875	COG0385	Bile acid
BJ961_RS13920	COG2124	cytochrome p450
BJ961_RS13935	COG0668	transmembrane transport
BJ961_RS13945	COG1132	(ABC) transporter
BJ961_RS13955	COG0366	Alpha amylase catalytic
BJ961_RS13960	COG0395	ABC-type sugar transport system, permease component
BJ961_RS13965	COG1175	transmembrane transport
BJ961_RS13970	COG1653	transport
BJ961_RS14020	COG2080	2 iron, 2 sulfur cluster binding
BJ961_RS14025	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BJ961_RS14025	COG2010	Cytochrome c
BJ961_RS14040	COG1017	nitric oxide dioxygenase activity
BJ961_RS14040	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJ961_RS14080	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BJ961_RS14095	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BJ961_RS14115	COG0297	glycogen (starch) synthase activity
BJ961_RS14120	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BJ961_RS14130	COG3537	Alpha-1,2-mannosidase
BJ961_RS14165	COG1609	Transcriptional regulator
BJ961_RS14175	COG1175	transmembrane transport
BJ961_RS14180	COG0395	ABC-type sugar transport system, permease component
BJ961_RS14205	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BJ961_RS14240	COG0531	amino acid
BJ961_RS14250	COG0726	polysaccharide deacetylase
BJ961_RS14290	COG5001	Diguanylate cyclase
BJ961_RS14300	COG0583	DNA-binding transcription factor activity
BJ961_RS14310	COG1053	succinate dehydrogenase
BJ961_RS14315	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BJ961_RS14340	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS14350	COG3360	Dodecin
BJ961_RS14355	COG2182	Extracellular solute-binding protein
BJ961_RS14360	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
BJ961_RS14365	COG0121	glutamine amidotransferase
BJ961_RS14370	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BJ961_RS14375	COG3572	ergothioneine biosynthetic process
BJ961_RS14390	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BJ961_RS14410	COG0596	Alpha beta hydrolase
BJ961_RS14455	COG4221	oxidoreductase activity
BJ961_RS14465	COG0583	DNA-binding transcription factor activity
BJ961_RS14480	COG1609	Transcriptional regulator
BJ961_RS14485	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BJ961_RS14495	COG0242	peptide deformylase activity
BJ961_RS14505	COG2072	flavoprotein involved in K transport
BJ961_RS14525	COG0800	Aldolase
BJ961_RS14575	COG0702	epimerase
BJ961_RS14580	COG1846	Transcriptional regulator
BJ961_RS14585	COG2409	Drug exporters of the RND superfamily
BJ961_RS14600	COG0668	transmembrane transport
BJ961_RS14640	COG3540	Alkaline phosphatase
BJ961_RS14660	COG1131	(ABC) transporter
BJ961_RS14665	COG1725	Transcriptional regulator
BJ961_RS14690	COG0577	efflux transmembrane transporter activity
BJ961_RS14690	COG1136	(ABC) transporter
BJ961_RS14700	COG1556	Lactate utilization protein
BJ961_RS14705	COG1139	Iron-sulfur cluster binding protein
BJ961_RS14710	COG0247	lactate metabolic process
BJ961_RS14715	COG1070	Carbohydrate kinase
BJ961_RS14720	COG3347	Dehydrogenase
BJ961_RS14720	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS14725	COG4952	isomerase
BJ961_RS14730	COG1129	ABC transporter
BJ961_RS14735	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJ961_RS14755	COG1609	Transcriptional regulator
BJ961_RS14770	COG1595	DNA-templated transcription, initiation
BJ961_RS14775	COG1357	PFAM Pentapeptide repeats (8 copies)
BJ961_RS14780	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BJ961_RS14780	COG2124	cytochrome p450
BJ961_RS14785	COG1309	transcriptional regulator
BJ961_RS14835	COG1796	DNA polymerase
BJ961_RS14835	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BJ961_RS14875	COG1006	Multisubunit Na H antiporter MnhC subunit
BJ961_RS14880	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJ961_RS14895	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BJ961_RS14940	COG2124	cytochrome p450
BJ961_RS14955	COG0435	Glutathione S-transferase
BJ961_RS14970	COG2124	cytochrome p450
BJ961_RS14995	COG0667	Aldo Keto reductase
BJ961_RS15010	COG3250	beta-galactosidase activity
BJ961_RS15040	COG2890	protein-(glutamine-N5) methyltransferase activity
BJ961_RS15055	COG0248	Ppx GppA phosphatase
BJ961_RS15115	COG1132	(ABC) transporter
BJ961_RS15130	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS15170	COG1309	transcriptional regulator
BJ961_RS15200	COG0572	uridine kinase
BJ961_RS15240	COG0673	inositol 2-dehydrogenase activity
BJ961_RS15255	COG2508	Transcriptional regulator
BJ961_RS15260	COG0410	ABC transporter
BJ961_RS15270	COG0559	Belongs to the binding-protein-dependent transport system permease family
BJ961_RS15310	COG1132	(ABC) transporter
BJ961_RS15350	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BJ961_RS15355	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BJ961_RS15360	COG2080	2 iron, 2 sulfur cluster binding
BJ961_RS15370	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS15375	COG1295	ribonuclease BN
BJ961_RS15410	COG0477	Major facilitator Superfamily
BJ961_RS15430	COG3290	protein histidine kinase activity
BJ961_RS15470	COG0277	FAD linked oxidase domain protein
BJ961_RS15500	COG0395	ABC-type sugar transport system, permease component
BJ961_RS15505	COG1175	transmembrane transport
BJ961_RS15570	COG2264	protein methyltransferase activity
BJ961_RS15575	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS15585	COG1063	alcohol dehydrogenase
BJ961_RS15595	COG3397	chitin binding
BJ961_RS15630	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJ961_RS15635	COG1120	ATPase activity
BJ961_RS15645	COG0488	(ABC) transporter
BJ961_RS15650	COG0488	(ABC) transporter
BJ961_RS15670	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BJ961_RS15675	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BJ961_RS15690	COG1595	DNA-templated transcription, initiation
BJ961_RS15705	COG1233	COG1233 Phytoene dehydrogenase and related
BJ961_RS15740	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BJ961_RS15745	COG1937	Protein conserved in bacteria
BJ961_RS15760	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
BJ961_RS15775	COG2235	arginine
BJ961_RS15825	COG0505	Belongs to the CarA family
BJ961_RS15835	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BJ961_RS15840	COG1191	sigma factor activity
BJ961_RS15860	COG0783	Belongs to the Dps family
BJ961_RS15865	COG0655	NAD(P)H dehydrogenase (quinone) activity
BJ961_RS15880	COG2267	carboxylic ester hydrolase activity
BJ961_RS15900	COG2018	Roadblock/LC7 domain
BJ961_RS15920	COG2124	cytochrome p450
BJ961_RS15925	COG2186	Transcriptional regulator
BJ961_RS15935	COG2376	Dihydroxyacetone kinase
BJ961_RS15940	COG0698	ribose 5-phosphate isomerase
BJ961_RS15945	COG0149	triose-phosphate isomerase activity
BJ961_RS15950	COG1082	Xylose isomerase domain protein TIM barrel
BJ961_RS15955	COG2084	Dehydrogenase
BJ961_RS15960	COG3340	Belongs to the peptidase S51 family
BJ961_RS15975	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BJ961_RS15980	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BJ961_RS15985	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BJ961_RS15990	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BJ961_RS16000	COG0142	geranyltranstransferase activity
BJ961_RS16005	COG0829	nickel cation binding
BJ961_RS16010	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BJ961_RS16020	COG0804	urea catabolic process
BJ961_RS16025	COG0832	Belongs to the urease beta subunit family
BJ961_RS16030	COG0831	urea catabolic process
BJ961_RS16040	COG0142	geranyltranstransferase activity
BJ961_RS16065	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BJ961_RS16110	COG0745	RESPONSE REGULATOR receiver
BJ961_RS16115	COG2205	protein histidine kinase activity
BJ961_RS16120	COG2340	Cysteine-rich secretory protein family
BJ961_RS16125	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BJ961_RS16130	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJ961_RS16160	COG0739	heme binding
BJ961_RS16160	COG0741	lytic transglycosylase activity
BJ961_RS16160	COG1196	nuclear chromosome segregation
BJ961_RS16170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJ961_RS16175	COG0395	ABC-type sugar transport system, permease component
BJ961_RS16205	COG0673	inositol 2-dehydrogenase activity
BJ961_RS16215	COG1278	Cold shock
BJ961_RS16220	COG0596	Alpha beta hydrolase
BJ961_RS16230	COG4221	oxidoreductase activity
BJ961_RS16250	COG4221	oxidoreductase activity
BJ961_RS16255	COG2181	nitrate reductase activity
BJ961_RS16265	COG1140	nitrate reductase beta subunit
BJ961_RS16275	COG0535	radical SAM domain protein
BJ961_RS16335	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BJ961_RS16345	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BJ961_RS16385	COG3486	L-lysine 6-monooxygenase (NADPH) activity
BJ961_RS16390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJ961_RS16395	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJ961_RS16400	COG1120	ATPase activity
BJ961_RS16405	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BJ961_RS16410	COG1132	(ABC) transporter
BJ961_RS16420	COG1132	(ABC) transporter
BJ961_RS16425	COG2382	esterase
BJ961_RS16465	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS16475	COG0483	inositol monophosphate 1-phosphatase activity
BJ961_RS16485	COG0659	secondary active sulfate transmembrane transporter activity
BJ961_RS16495	COG0346	lactoylglutathione lyase activity
BJ961_RS16500	COG1121	(ABC) transporter
BJ961_RS16505	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJ961_RS16515	COG0803	Belongs to the bacterial solute-binding protein 9 family
BJ961_RS16535	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BJ961_RS16550	COG3483	tryptophan 2,3-dioxygenase activity
BJ961_RS16570	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJ961_RS16580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJ961_RS16585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJ961_RS16595	COG1131	(ABC) transporter
BJ961_RS16615	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS16620	COG2124	cytochrome p450
BJ961_RS16630	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJ961_RS16650	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJ961_RS16665	COG0475	glutathione-regulated potassium exporter activity
BJ961_RS16695	COG0596	Alpha beta hydrolase
BJ961_RS16720	COG1609	Transcriptional regulator
BJ961_RS16725	COG0395	ABC-type sugar transport system, permease component
BJ961_RS16740	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BJ961_RS16760	COG0477	Major facilitator Superfamily
BJ961_RS16785	COG1984	allophanate hydrolase subunit 2
BJ961_RS16790	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BJ961_RS16795	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BJ961_RS16810	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BJ961_RS16830	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BJ961_RS16835	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJ961_RS16835	COG1263	PTS System
BJ961_RS16860	COG0667	Aldo Keto reductase
BJ961_RS16885	COG0460	homoserine dehydrogenase
BJ961_RS16890	COG0604	alcohol dehydrogenase
BJ961_RS16915	COG1595	DNA-templated transcription, initiation
BJ961_RS16935	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BJ961_RS16980	COG1891	lyase activity
BJ961_RS16985	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS16995	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BJ961_RS17000	COG2353	YceI-like domain
BJ961_RS17015	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BJ961_RS17020	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BJ961_RS17040	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BJ961_RS17055	COG2814	Major facilitator Superfamily
BJ961_RS17075	COG1271	oxidase subunit
BJ961_RS17120	COG3291	Pkd domain containing protein
BJ961_RS17125	COG1802	Transcriptional regulator
BJ961_RS17130	COG0006	proline dipeptidase activity
BJ961_RS17150	COG1309	transcriptional regulator
BJ961_RS17175	COG1136	(ABC) transporter
BJ961_RS17175	COG0577	efflux transmembrane transporter activity
BJ961_RS17180	COG0577	efflux transmembrane transporter activity
BJ961_RS17195	COG4948	Mandelate Racemase Muconate Lactonizing
BJ961_RS17210	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BJ961_RS17215	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BJ961_RS17220	COG4106	trans-aconitate 2-methyltransferase activity
BJ961_RS17265	COG2027	D-alanyl-D-alanine carboxypeptidase
BJ961_RS17285	COG0406	alpha-ribazole phosphatase activity
BJ961_RS17300	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BJ961_RS17310	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJ961_RS17315	COG0640	Transcriptional regulator
BJ961_RS17320	COG2814	Major facilitator Superfamily
BJ961_RS17325	COG0583	DNA-binding transcription factor activity
BJ961_RS17330	COG0667	Aldo Keto reductase
BJ961_RS17355	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS17370	COG0753	catalase activity
BJ961_RS17385	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BJ961_RS17385	COG2508	Transcriptional regulator
BJ961_RS17390	COG0019	diaminopimelate decarboxylase activity
BJ961_RS17400	COG1113	amino acid transport
BJ961_RS17405	COG0531	amino acid
BJ961_RS17415	COG0738	Major facilitator superfamily
BJ961_RS17420	COG3226	Transcriptional regulator
BJ961_RS17430	COG0596	Alpha beta hydrolase
BJ961_RS17445	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BJ961_RS17450	COG3170	Tfp pilus assembly protein FimV
BJ961_RS17460	COG0179	Fumarylacetoacetate (FAA) hydrolase
BJ961_RS17475	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJ961_RS17505	COG0395	ABC-type sugar transport system, permease component
BJ961_RS17515	COG1470	cell adhesion involved in biofilm formation
BJ961_RS17515	COG0366	Alpha amylase catalytic
BJ961_RS17520	COG0154	amidase activity
BJ961_RS17525	COG1595	DNA-templated transcription, initiation
BJ961_RS17560	COG0604	alcohol dehydrogenase
BJ961_RS17575	COG0604	alcohol dehydrogenase
BJ961_RS17575	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS17575	COG3321	synthase
BJ961_RS17620	COG2315	Protein conserved in bacteria
BJ961_RS17625	COG2315	Protein conserved in bacteria
BJ961_RS17665	COG1595	DNA-templated transcription, initiation
BJ961_RS17690	COG0583	DNA-binding transcription factor activity
BJ961_RS17705	COG0277	FAD linked oxidase domain protein
BJ961_RS17725	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJ961_RS17755	COG3118	belongs to the thioredoxin family
BJ961_RS17870	COG2197	response regulator
BJ961_RS17920	COG0640	Transcriptional regulator
BJ961_RS17935	COG1309	transcriptional regulator
BJ961_RS17940	COG2267	carboxylic ester hydrolase activity
BJ961_RS17950	COG1024	Enoyl-CoA hydratase
BJ961_RS17950	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJ961_RS17965	COG0537	adenosine 5'-monophosphoramidase activity
BJ961_RS17985	COG1522	sequence-specific DNA binding
BJ961_RS17990	COG0783	Belongs to the Dps family
BJ961_RS18020	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS18110	COG3328	transposase activity
BJ961_RS18155	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJ961_RS18165	COG4106	trans-aconitate 2-methyltransferase activity
BJ961_RS18170	COG1131	(ABC) transporter
BJ961_RS18180	COG0745	RESPONSE REGULATOR receiver
BJ961_RS18185	COG2205	protein histidine kinase activity
BJ961_RS18195	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS18230	COG1506	peptidase
BJ961_RS18230	COG4946	Tricorn protease homolog
BJ961_RS18230	COG0823	Involved in the tonB-independent uptake of proteins
BJ961_RS18240	COG1032	radical SAM domain protein
BJ961_RS18280	COG0583	DNA-binding transcription factor activity
BJ961_RS18325	COG0300	oxidoreductase activity
BJ961_RS18335	COG3328	transposase activity
BJ961_RS18370	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BJ961_RS18385	COG1733	regulation of RNA biosynthetic process
BJ961_RS18390	COG0596	Alpha beta hydrolase
BJ961_RS18410	COG0069	glutamate synthase activity
BJ961_RS18435	COG1921	L-seryl-tRNASec selenium transferase activity
BJ961_RS18450	COG0709	Synthesizes selenophosphate from selenide and ATP
BJ961_RS18465	COG0437	4 iron, 4 sulfur cluster binding
BJ961_RS18490	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BJ961_RS18510	COG1169	isochorismate synthase
BJ961_RS18515	COG1132	(ABC) transporter
BJ961_RS18520	COG1132	(ABC) transporter
BJ961_RS18520	COG2375	cellular response to nickel ion
BJ961_RS18525	COG4106	trans-aconitate 2-methyltransferase activity
BJ961_RS18535	COG2124	cytochrome p450
BJ961_RS18550	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJ961_RS18550	COG3433	isochorismatase activity
BJ961_RS18550	COG2226	methyltransferase
BJ961_RS18560	COG1021	2,3-dihydroxybenzoate-AMP ligase
BJ961_RS18565	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BJ961_RS18570	COG4171	peptide transport system, permease
BJ961_RS18575	COG0601	transmembrane transport
BJ961_RS18580	COG0747	negative chemotaxis
BJ961_RS18600	COG1309	transcriptional regulator
BJ961_RS18610	COG0662	Cupin 2, conserved barrel domain protein
BJ961_RS18625	COG4552	Acetyltransferase involved in intracellular survival and related
BJ961_RS18660	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS18705	COG4916	TIR domain
BJ961_RS18735	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BJ961_RS18760	COG1733	regulation of RNA biosynthetic process
BJ961_RS18775	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
BJ961_RS18785	COG3328	transposase activity
BJ961_RS18805	COG0745	RESPONSE REGULATOR receiver
BJ961_RS18810	COG2205	protein histidine kinase activity
BJ961_RS18855	COG1309	transcriptional regulator
BJ961_RS18860	COG1064	alcohol dehydrogenase
BJ961_RS18865	COG1672	PFAM Archaeal ATPase
BJ961_RS18865	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
BJ961_RS18895	COG0640	Transcriptional regulator
BJ961_RS18945	COG2318	DinB family
BJ961_RS18955	COG1484	DNA-dependent DNA replication
BJ961_RS18970	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS18975	COG0583	DNA-binding transcription factor activity
BJ961_RS19015	COG1309	transcriptional regulator
BJ961_RS19040	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BJ961_RS19045	COG1162	GTPase activity
BJ961_RS19090	COG1733	regulation of RNA biosynthetic process
BJ961_RS19105	COG2362	D-Aminopeptidase
BJ961_RS19110	COG0110	maltose O-acetyltransferase activity
BJ961_RS19135	COG0667	Aldo Keto reductase
BJ961_RS19155	COG0656	L-ascorbic acid biosynthetic process
BJ961_RS19165	COG3408	Glycogen debranching enzyme
BJ961_RS19230	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJ961_RS19295	COG1733	regulation of RNA biosynthetic process
BJ961_RS19300	COG0702	epimerase
BJ961_RS19315	COG4608	Belongs to the ABC transporter superfamily
BJ961_RS19320	COG0444	Belongs to the ABC transporter superfamily
BJ961_RS19325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJ961_RS19380	COG2318	DinB family
BJ961_RS19390	COG0076	glutamate decarboxylase activity
BJ961_RS19405	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BJ961_RS19410	COG0583	DNA-binding transcription factor activity
BJ961_RS19425	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS19430	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS19435	COG1126	abc transporter atp-binding protein
BJ961_RS19445	COG0765	amino acid transport
BJ961_RS19525	COG1472	Belongs to the glycosyl hydrolase 3 family
BJ961_RS19535	COG3629	intracellular signal transduction
BJ961_RS19535	COG3903	Transcriptional regulator
BJ961_RS19540	COG1940	carbohydrate kinase activity
BJ961_RS19590	COG1136	(ABC) transporter
BJ961_RS19600	COG3291	Pkd domain containing protein
BJ961_RS19600	COG3525	Glycosyl hydrolase, family 20, catalytic domain
BJ961_RS19605	COG1309	transcriptional regulator
BJ961_RS19610	COG0154	amidase activity
BJ961_RS19625	COG1737	Transcriptional regulator
BJ961_RS19635	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BJ961_RS19640	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BJ961_RS19645	COG0667	Aldo Keto reductase
BJ961_RS19680	COG5297	Belongs to the glycosyl hydrolase family 6
BJ961_RS19680	COG3250	beta-galactosidase activity
BJ961_RS19690	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BJ961_RS19725	COG0277	FAD linked oxidase domain protein
BJ961_RS19750	COG4608	Belongs to the ABC transporter superfamily
BJ961_RS19755	COG0444	Belongs to the ABC transporter superfamily
BJ961_RS19760	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJ961_RS19770	COG0747	negative chemotaxis
BJ961_RS19780	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BJ961_RS19805	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJ961_RS19825	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BJ961_RS19830	COG3119	arylsulfatase activity
BJ961_RS19865	COG0516	GMP reductase activity
BJ961_RS19865	COG0517	IMP dehydrogenase activity
BJ961_RS19880	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BJ961_RS19885	COG2409	Drug exporters of the RND superfamily
BJ961_RS19920	COG0542	response to heat
BJ961_RS19925	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BJ961_RS19950	COG3226	Transcriptional regulator
BJ961_RS19960	COG0326	Molecular chaperone. Has ATPase activity
BJ961_RS19975	COG0745	RESPONSE REGULATOR receiver
BJ961_RS19980	COG2159	amidohydrolase
BJ961_RS19990	COG2814	Major facilitator Superfamily
BJ961_RS19990	COG0477	Major facilitator Superfamily
BJ961_RS20000	COG2755	lipolytic protein G-D-S-L family
BJ961_RS20005	COG4977	sequence-specific DNA binding
BJ961_RS20030	COG2175	clavaminate synthase activity
BJ961_RS20040	COG0395	ABC-type sugar transport system, permease component
BJ961_RS20045	COG1175	transmembrane transport
BJ961_RS20060	COG1953	Uracil, thiamine, allantoin
BJ961_RS20085	COG1609	Transcriptional regulator
BJ961_RS20125	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJ961_RS20130	COG2151	metal-sulfur cluster biosynthetic enzyme
BJ961_RS20135	COG3396	Phenylacetate-CoA oxygenase
BJ961_RS20140	COG3460	Phenylacetate-CoA oxygenase
BJ961_RS20145	COG3396	Phenylacetate-CoA oxygenase
BJ961_RS20160	COG2072	flavoprotein involved in K transport
BJ961_RS20205	COG5640	endopeptidase activity
BJ961_RS20210	COG1119	ATPase activity
BJ961_RS20215	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BJ961_RS20220	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJ961_RS20230	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS20250	COG1335	isochorismatase
BJ961_RS20315	COG0583	DNA-binding transcription factor activity
BJ961_RS20330	COG2814	Major facilitator Superfamily
BJ961_RS20340	COG0583	DNA-binding transcription factor activity
BJ961_RS20345	COG5640	endopeptidase activity
BJ961_RS20365	COG1017	nitric oxide dioxygenase activity
BJ961_RS20365	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJ961_RS20370	COG1959	2 iron, 2 sulfur cluster binding
BJ961_RS20390	COG4585	Histidine kinase
BJ961_RS20395	COG2197	response regulator
BJ961_RS20400	COG2814	Major facilitator Superfamily
BJ961_RS20455	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS20460	COG0028	Belongs to the TPP enzyme family
BJ961_RS20470	COG4209	transmembrane transport
BJ961_RS20475	COG0395	ABC-type sugar transport system, permease component
BJ961_RS20510	COG1120	ATPase activity
BJ961_RS20575	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
BJ961_RS20580	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS20605	COG0475	glutathione-regulated potassium exporter activity
BJ961_RS20610	COG2124	cytochrome p450
BJ961_RS20645	COG0456	acetyltransferase
BJ961_RS20650	COG0243	molybdopterin cofactor binding
BJ961_RS20670	COG1088	dTDP-glucose 4,6-dehydratase activity
BJ961_RS20725	COG0009	L-threonylcarbamoyladenylate synthase
BJ961_RS20755	COG2208	phosphoserine phosphatase activity
BJ961_RS20780	COG1793	dna ligase
BJ961_RS20780	COG3285	dna ligase
BJ961_RS20790	COG0181	hydroxymethylbilane synthase activity
BJ961_RS20800	COG1191	sigma factor activity
BJ961_RS20830	COG0366	Alpha amylase catalytic
BJ961_RS20845	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BJ961_RS20850	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
BJ961_RS20880	COG0784	Response regulator, receiver
BJ961_RS20880	COG2205	protein histidine kinase activity
BJ961_RS20880	COG5002	protein histidine kinase activity
BJ961_RS20895	COG1366	Belongs to the anti-sigma-factor antagonist family
BJ961_RS20900	COG1366	Belongs to the anti-sigma-factor antagonist family
BJ961_RS20905	COG2172	sigma factor antagonist activity
BJ961_RS20960	COG1982	Orn Lys Arg decarboxylase major
BJ961_RS21005	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BJ961_RS21035	COG2197	response regulator
BJ961_RS21040	COG2340	Cysteine-rich secretory protein family
BJ961_RS21050	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BJ961_RS21055	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS21075	COG0667	Aldo Keto reductase
BJ961_RS21085	COG0328	RNA-DNA hybrid ribonuclease activity
BJ961_RS21100	COG0740	serine-type endopeptidase activity
BJ961_RS21105	COG0740	serine-type endopeptidase activity
BJ961_RS21115	COG1191	sigma factor activity
BJ961_RS21150	COG0667	Aldo Keto reductase
BJ961_RS21155	COG0583	DNA-binding transcription factor activity
BJ961_RS21165	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BJ961_RS21170	COG0346	lactoylglutathione lyase activity
BJ961_RS21185	COG0431	NADPH-dependent FMN reductase
BJ961_RS21225	COG0673	inositol 2-dehydrogenase activity
BJ961_RS21270	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS21275	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BJ961_RS21290	COG0515	serine threonine protein kinase
BJ961_RS21320	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BJ961_RS21330	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BJ961_RS21345	COG2205	protein histidine kinase activity
BJ961_RS21350	COG0745	RESPONSE REGULATOR receiver
BJ961_RS21375	COG0154	amidase activity
BJ961_RS21400	COG4608	Belongs to the ABC transporter superfamily
BJ961_RS21405	COG0444	Belongs to the ABC transporter superfamily
BJ961_RS21415	COG0601	transmembrane transport
BJ961_RS21425	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS21430	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS21450	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS21455	COG1024	Enoyl-CoA hydratase
BJ961_RS21475	COG0183	Belongs to the thiolase family
BJ961_RS21480	COG1309	transcriptional regulator
BJ961_RS21485	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS21490	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS21495	COG1024	Enoyl-CoA hydratase
BJ961_RS21500	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS21510	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS21525	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS21530	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS21545	COG1309	transcriptional regulator
BJ961_RS21550	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS21555	COG3971	2-oxopent-4-enoate hydratase activity
BJ961_RS21565	COG0183	Belongs to the thiolase family
BJ961_RS21575	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS21585	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS21590	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS21605	COG2030	dehydratase
BJ961_RS21610	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS21615	COG0183	Belongs to the thiolase family
BJ961_RS21635	COG1053	succinate dehydrogenase
BJ961_RS21665	COG1053	succinate dehydrogenase
BJ961_RS21675	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BJ961_RS21720	COG2197	response regulator
BJ961_RS21735	COG0667	Aldo Keto reductase
BJ961_RS21745	COG0501	Belongs to the peptidase M48B family
BJ961_RS21750	COG2376	Dihydroxyacetone kinase
BJ961_RS21755	COG1461	Dihydroxyacetone kinase
BJ961_RS21785	COG0446	pyridine nucleotide-disulphide oxidoreductase
BJ961_RS21785	COG1902	pentaerythritol trinitrate reductase activity
BJ961_RS21800	COG2890	protein-(glutamine-N5) methyltransferase activity
BJ961_RS21810	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BJ961_RS21825	COG3458	cephalosporin-C deacetylase activity
BJ961_RS21830	COG2188	Transcriptional regulator
BJ961_RS21835	COG2226	methyltransferase
BJ961_RS21850	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BJ961_RS21860	COG2066	Belongs to the glutaminase family
BJ961_RS21870	COG1968	undecaprenyl-diphosphatase activity
BJ961_RS21875	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BJ961_RS21880	COG1993	acr, cog1993
BJ961_RS21885	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BJ961_RS21900	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
BJ961_RS21910	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJ961_RS21920	COG3458	cephalosporin-C deacetylase activity
BJ961_RS21930	COG4166	transmembrane transport
BJ961_RS21935	COG0601	transmembrane transport
BJ961_RS21960	COG0137	argininosuccinate synthase activity
BJ961_RS21970	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BJ961_RS21985	COG1472	Belongs to the glycosyl hydrolase 3 family
BJ961_RS21995	COG1175	transmembrane transport
BJ961_RS22000	COG1653	transport
BJ961_RS22045	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS22065	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BJ961_RS22070	COG0463	Glycosyl transferase, family 2
BJ961_RS22105	COG1349	DNA-binding transcription factor activity
BJ961_RS22160	COG1940	carbohydrate kinase activity
BJ961_RS22170	COG2813	Specifically methylates the guanine in position
BJ961_RS22175	COG0191	fructose-bisphosphate aldolase activity
BJ961_RS22180	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJ961_RS22200	COG0673	inositol 2-dehydrogenase activity
BJ961_RS22205	COG0783	Belongs to the Dps family
BJ961_RS22260	COG1501	Belongs to the glycosyl hydrolase 31 family
BJ961_RS22270	COG1175	transmembrane transport
BJ961_RS22275	COG0395	ABC-type sugar transport system, permease component
BJ961_RS22280	COG2723	6-phospho-beta-galactosidase activity
BJ961_RS22285	COG1846	Transcriptional regulator
BJ961_RS22285	COG1940	carbohydrate kinase activity
BJ961_RS22295	COG3250	beta-galactosidase activity
BJ961_RS22300	COG0395	ABC-type sugar transport system, permease component
BJ961_RS22305	COG1175	transmembrane transport
BJ961_RS22315	COG1609	Transcriptional regulator
BJ961_RS22320	COG0738	Major facilitator superfamily
BJ961_RS22340	COG2197	response regulator
BJ961_RS22345	COG4585	Histidine kinase
BJ961_RS22350	COG0445	tRNA wobble uridine modification
BJ961_RS22360	COG1660	Displays ATPase and GTPase activities
BJ961_RS22390	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BJ961_RS22400	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BJ961_RS22410	COG0204	Acyl-transferase
BJ961_RS22435	COG0584	glycerophosphoryl diester phosphodiesterase
BJ961_RS22475	COG0671	phosphoesterase, PA-phosphatase related
BJ961_RS22505	COG0640	Transcriptional regulator
BJ961_RS22510	COG1902	pentaerythritol trinitrate reductase activity
BJ961_RS22520	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS22530	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BJ961_RS22535	COG2971	BadF BadG BcrA BcrD
BJ961_RS22595	COG4221	oxidoreductase activity
BJ961_RS22610	COG3387	PFAM Glycoside hydrolase 15-related
BJ961_RS22620	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BJ961_RS22625	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BJ961_RS22630	COG2080	2 iron, 2 sulfur cluster binding
BJ961_RS22640	COG4565	transcriptional regulatory protein
BJ961_RS22645	COG3290	protein histidine kinase activity
BJ961_RS22675	COG0456	acetyltransferase
BJ961_RS22680	COG0432	Pfam Uncharacterised protein family UPF0047
BJ961_RS22695	COG1132	(ABC) transporter
BJ961_RS22710	COG1132	(ABC) transporter
BJ961_RS22715	COG1132	(ABC) transporter
BJ961_RS22725	COG0254	rRNA binding
BJ961_RS22740	COG1946	Acyl-CoA thioesterase
BJ961_RS22750	COG2018	Roadblock/LC7 domain
BJ961_RS22800	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BJ961_RS22810	COG2115	Belongs to the xylose isomerase family
BJ961_RS22815	COG1070	Carbohydrate kinase
BJ961_RS22820	COG1846	Transcriptional regulator
BJ961_RS22820	COG1940	carbohydrate kinase activity
BJ961_RS22835	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS22845	COG0592	DNA-directed DNA polymerase activity
BJ961_RS22860	COG0714	Associated with various cellular activities
BJ961_RS22895	COG0477	Major facilitator Superfamily
BJ961_RS22920	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS22925	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS22935	COG3800	Transcriptional regulator
BJ961_RS22935	COG1396	sequence-specific DNA binding
BJ961_RS22945	COG1793	dna ligase
BJ961_RS22955	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS22965	COG3424	synthase
BJ961_RS22970	COG2124	cytochrome p450
BJ961_RS22980	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS22990	COG0242	peptide deformylase activity
BJ961_RS22995	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BJ961_RS23000	COG3442	glutamine amidotransferase
BJ961_RS23005	COG0205	6-phosphofructokinase activity
BJ961_RS23020	COG3275	phosphorelay sensor kinase activity
BJ961_RS23035	COG3279	Response regulator of the LytR AlgR family
BJ961_RS23040	COG1522	sequence-specific DNA binding
BJ961_RS23045	COG1834	amidinotransferase
BJ961_RS23050	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BJ961_RS23060	COG0477	Major facilitator Superfamily
BJ961_RS23095	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BJ961_RS23105	COG0804	urea catabolic process
BJ961_RS23110	COG0832	Belongs to the urease beta subunit family
BJ961_RS23115	COG0831	urea catabolic process
BJ961_RS23125	COG0740	serine-type endopeptidase activity
BJ961_RS23165	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BJ961_RS23170	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BJ961_RS23175	COG2226	methyltransferase
BJ961_RS23185	COG0456	acetyltransferase
BJ961_RS23205	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BJ961_RS23210	COG3663	DNA glycosylase
BJ961_RS23230	COG4585	Histidine kinase
BJ961_RS23235	COG2197	response regulator
BJ961_RS23240	COG1940	carbohydrate kinase activity
BJ961_RS23245	COG2188	Transcriptional regulator
BJ961_RS23250	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
BJ961_RS23280	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BJ961_RS23285	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BJ961_RS23295	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJ961_RS23295	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BJ961_RS23335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJ961_RS23350	COG0626	cystathionine gamma-synthase activity
BJ961_RS23365	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS23385	COG0419	ATPase involved in DNA repair
BJ961_RS23390	COG0420	3'-5' exonuclease activity
BJ961_RS23395	COG1739	Uncharacterized protein family UPF0029
BJ961_RS23405	COG1832	CoA-binding protein
BJ961_RS23410	COG3864	Putative metallopeptidase domain
BJ961_RS23415	COG0714	Associated with various cellular activities
BJ961_RS23425	COG0640	Transcriptional regulator
BJ961_RS23440	COG0110	maltose O-acetyltransferase activity
BJ961_RS23475	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BJ961_RS23485	COG1968	undecaprenyl-diphosphatase activity
BJ961_RS23495	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS23500	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BJ961_RS23510	COG2318	DinB family
BJ961_RS23525	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BJ961_RS23560	COG0723	plastoquinol--plastocyanin reductase activity
BJ961_RS23575	COG0697	spore germination
BJ961_RS23610	COG0384	phenazine biosynthesis protein PhzF
BJ961_RS23650	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BJ961_RS23650	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BJ961_RS23660	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BJ961_RS23680	COG1716	ATPase activity
BJ961_RS23700	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BJ961_RS23730	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BJ961_RS23740	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BJ961_RS23755	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
BJ961_RS23770	COG2018	Roadblock/LC7 domain
BJ961_RS23805	COG2814	Major facilitator Superfamily
BJ961_RS23810	COG4336	lyase activity
BJ961_RS23840	COG2364	Membrane
BJ961_RS23850	COG2270	Major facilitator Superfamily
BJ961_RS23860	COG3030	protein affecting phage T7 exclusion by the F plasmid
BJ961_RS23865	COG1216	Glycosyl transferase, family 2
BJ961_RS23890	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS23940	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BJ961_RS23945	COG0140	phosphoribosyl-ATP diphosphatase activity
BJ961_RS23950	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BJ961_RS23955	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BJ961_RS23955	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BJ961_RS23960	COG3201	nicotinamide mononucleotide transporter
BJ961_RS23975	COG1595	DNA-templated transcription, initiation
BJ961_RS23995	COG2223	nitrite transmembrane transporter activity
BJ961_RS24005	COG2233	PERMEase
BJ961_RS24030	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BJ961_RS24060	COG2390	Transcriptional regulator
BJ961_RS24065	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BJ961_RS24075	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BJ961_RS24090	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BJ961_RS24100	COG1758	RNA polymerase activity
BJ961_RS24105	COG0194	GDP metabolic process
BJ961_RS24115	COG0284	orotidine-5'-phosphate decarboxylase activity
BJ961_RS24120	COG0167	dihydroorotate dehydrogenase activity
BJ961_RS24125	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BJ961_RS24130	COG0505	Belongs to the CarA family
BJ961_RS24140	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BJ961_RS24145	COG0540	Belongs to the ATCase OTCase family
BJ961_RS24150	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BJ961_RS24160	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BJ961_RS24165	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BJ961_RS24170	COG0006	proline dipeptidase activity
BJ961_RS24180	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BJ961_RS24185	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BJ961_RS24195	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BJ961_RS24205	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BJ961_RS24210	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BJ961_RS24230	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BJ961_RS24245	COG0124	histidyl-tRNA synthetase
BJ961_RS24255	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BJ961_RS24260	COG1196	nuclear chromosome segregation
BJ961_RS24265	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BJ961_RS24270	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BJ961_RS24275	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BJ961_RS24280	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BJ961_RS24290	COG2255	four-way junction helicase activity
BJ961_RS24295	COG0632	four-way junction helicase activity
BJ961_RS24300	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BJ961_RS24305	COG0217	transcriptional regulatory protein
BJ961_RS24310	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BJ961_RS24315	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
BJ961_RS24325	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS24330	COG1560	Kdo2-lipid A biosynthetic process
BJ961_RS24335	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BJ961_RS24355	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BJ961_RS24370	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BJ961_RS24395	COG0395	ABC-type sugar transport system, permease component
BJ961_RS24400	COG1175	transmembrane transport
BJ961_RS24445	COG0456	acetyltransferase
BJ961_RS24455	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BJ961_RS24505	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BJ961_RS24510	COG1648	precorrin-2 dehydrogenase activity
BJ961_RS24510	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BJ961_RS24515	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BJ961_RS24530	COG1464	Belongs to the NlpA lipoprotein family
BJ961_RS24535	COG2011	ABC-type metal ion transport system permease component
BJ961_RS24540	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BJ961_RS24565	COG0584	glycerophosphoryl diester phosphodiesterase
BJ961_RS24575	COG0477	Major facilitator Superfamily
BJ961_RS24590	COG0165	Argininosuccinate lyase
BJ961_RS24620	COG1438	arginine binding
BJ961_RS24625	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BJ961_RS24630	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BJ961_RS24635	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BJ961_RS24640	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BJ961_RS24665	COG0697	spore germination
BJ961_RS24675	COG1649	PFAM Uncharacterised BCR, COG1649
BJ961_RS24685	COG1051	belongs to the nudix hydrolase family
BJ961_RS24695	COG0072	phenylalanine-tRNA ligase activity
BJ961_RS24695	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BJ961_RS24700	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BJ961_RS24705	COG5002	protein histidine kinase activity
BJ961_RS24710	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BJ961_RS24715	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BJ961_RS24720	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BJ961_RS24725	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BJ961_RS24775	COG1012	belongs to the aldehyde dehydrogenase family
BJ961_RS24780	COG0174	glutamine synthetase
BJ961_RS24790	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BJ961_RS24815	COG4176	ABC-type proline glycine betaine transport system permease component
BJ961_RS24820	COG4175	Glycine betaine
BJ961_RS24820	COG0517	IMP dehydrogenase activity
BJ961_RS24825	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BJ961_RS24840	COG0564	pseudouridine synthase activity
BJ961_RS24875	COG0805	protein transport
BJ961_RS24880	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BJ961_RS24910	COG0545	Peptidyl-prolyl cis-trans isomerase
BJ961_RS24915	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
BJ961_RS24925	COG1609	Transcriptional regulator
BJ961_RS24930	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
BJ961_RS24935	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
BJ961_RS24950	COG4122	O-methyltransferase activity
BJ961_RS24955	COG1222	aaa ATPase
BJ961_RS24985	COG2197	response regulator
BJ961_RS24990	COG4166	transmembrane transport
BJ961_RS24995	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJ961_RS25000	COG1410	methionine synthase
BJ961_RS25000	COG0646	methionine synthase
BJ961_RS25005	COG1414	Transcriptional regulator
BJ961_RS25010	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BJ961_RS25015	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BJ961_RS25020	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BJ961_RS25030	COG0215	cysteine-tRNA ligase activity
BJ961_RS25045	COG0588	phosphoglycerate mutase activity
BJ961_RS25050	COG0598	Magnesium transport protein CorA
BJ961_RS25060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS25065	COG0667	Aldo Keto reductase
BJ961_RS25105	COG3012	SEC-C Motif Domain Protein
BJ961_RS25110	COG2186	Transcriptional regulator
BJ961_RS25115	COG3265	gluconokinase activity
BJ961_RS25125	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS25130	COG1063	alcohol dehydrogenase
BJ961_RS25150	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BJ961_RS25155	COG2149	membrane
BJ961_RS25190	COG3876	Protein conserved in bacteria
BJ961_RS25230	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS25240	COG0640	Transcriptional regulator
BJ961_RS25265	COG3842	ATPase activity
BJ961_RS25280	COG2851	Citrate transporter
BJ961_RS25285	COG0243	molybdopterin cofactor binding
BJ961_RS25300	COG1309	transcriptional regulator
BJ961_RS25310	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BJ961_RS25315	COG2188	Transcriptional regulator
BJ961_RS25350	COG2755	lipolytic protein G-D-S-L family
BJ961_RS25380	COG1725	Transcriptional regulator
BJ961_RS25395	COG2226	methyltransferase
BJ961_RS25420	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BJ961_RS25420	COG0662	Cupin 2, conserved barrel domain protein
BJ961_RS25430	COG0587	DNA-directed DNA polymerase activity
BJ961_RS25460	COG1799	cell septum assembly
BJ961_RS25465	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS25470	COG0477	Major facilitator Superfamily
BJ961_RS25480	COG0671	phosphoesterase, PA-phosphatase related
BJ961_RS25505	COG1160	GTP binding
BJ961_RS25515	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BJ961_RS25535	COG3541	Predicted nucleotidyltransferase
BJ961_RS25545	COG0494	nUDIX hydrolase
BJ961_RS25550	COG1187	pseudouridine synthase activity
BJ961_RS25555	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BJ961_RS25560	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BJ961_RS25575	COG0686	Belongs to the AlaDH PNT family
BJ961_RS25585	COG0494	nUDIX hydrolase
BJ961_RS25590	COG0504	CTP synthase activity
BJ961_RS25595	COG3387	PFAM Glycoside hydrolase 15-related
BJ961_RS25615	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS25620	COG0497	DNA recombination
BJ961_RS25625	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BJ961_RS25645	COG1120	ATPase activity
BJ961_RS25650	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJ961_RS25655	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJ961_RS25660	COG0647	UMP catabolic process
BJ961_RS25695	COG2094	Belongs to the DNA glycosylase MPG family
BJ961_RS25705	COG1881	PFAM PEBP family protein
BJ961_RS25725	COG1119	ATPase activity
BJ961_RS25740	COG2197	response regulator
BJ961_RS25755	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BJ961_RS25765	COG0842	Transport permease protein
BJ961_RS25765	COG1131	(ABC) transporter
BJ961_RS25765	COG1716	ATPase activity
BJ961_RS25770	COG0560	Phosphoserine phosphatase
BJ961_RS25770	COG3830	Belongs to the UPF0237 family
BJ961_RS25775	COG0588	phosphoglycerate mutase activity
BJ961_RS25795	COG2186	Transcriptional regulator
BJ961_RS25805	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS25820	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BJ961_RS25840	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BJ961_RS25845	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BJ961_RS25875	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BJ961_RS25890	COG3387	PFAM Glycoside hydrolase 15-related
BJ961_RS25930	COG1024	Enoyl-CoA hydratase
BJ961_RS25940	COG0488	(ABC) transporter
BJ961_RS25960	COG0235	Class ii aldolase
BJ961_RS25995	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BJ961_RS26000	COG1492	cobalamin metabolic process
BJ961_RS26015	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BJ961_RS26020	COG1797	cobyrinic acid a,c-diamide synthase activity
BJ961_RS26050	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
BJ961_RS26075	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BJ961_RS26080	COG0456	acetyltransferase
BJ961_RS26085	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BJ961_RS26090	COG1917	Cupin 2, conserved barrel domain protein
BJ961_RS26095	COG5285	phytanoyl-CoA dioxygenase
BJ961_RS26120	COG1414	Transcriptional regulator
BJ961_RS26145	COG1595	DNA-templated transcription, initiation
BJ961_RS26160	COG4677	pectinesterase activity
BJ961_RS26165	COG3866	Pectate lyase
BJ961_RS26170	COG2755	lipolytic protein G-D-S-L family
BJ961_RS26180	COG3507	Belongs to the glycosyl hydrolase 43 family
BJ961_RS26195	COG0395	ABC-type sugar transport system, permease component
BJ961_RS26215	COG1802	Transcriptional regulator
BJ961_RS26235	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJ961_RS26240	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BJ961_RS26245	COG1349	DNA-binding transcription factor activity
BJ961_RS26265	COG1063	alcohol dehydrogenase
BJ961_RS26275	COG1309	transcriptional regulator
BJ961_RS26315	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJ961_RS26330	COG2171	N-acyltransferase activity
BJ961_RS26335	COG3226	Transcriptional regulator
BJ961_RS26340	COG2076	Multidrug Resistance protein
BJ961_RS26345	COG2151	metal-sulfur cluster biosynthetic enzyme
BJ961_RS26350	COG0822	iron-sulfur transferase activity
BJ961_RS26355	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BJ961_RS26360	COG0396	ATPase activity
BJ961_RS26370	COG0719	Fe-S assembly protein
BJ961_RS26385	COG2746	aminoglycoside 3-N-acetyltransferase activity
BJ961_RS26390	COG1131	(ABC) transporter
BJ961_RS26420	COG0109	protoheme IX farnesyltransferase activity
BJ961_RS26430	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BJ961_RS26445	COG0363	glucosamine-6-phosphate deaminase activity
BJ961_RS26450	COG0166	Belongs to the GPI family
BJ961_RS26460	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BJ961_RS26465	COG0149	triose-phosphate isomerase activity
BJ961_RS26470	COG0126	phosphoglycerate kinase activity
BJ961_RS26475	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BJ961_RS26485	COG1481	regulation of sporulation
BJ961_RS26490	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BJ961_RS26495	COG1660	Displays ATPase and GTPase activities
BJ961_RS26500	COG0322	excinuclease ABC activity
BJ961_RS26525	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BJ961_RS26540	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BJ961_RS26565	COG0556	nucleotide-excision repair
BJ961_RS26575	COG0584	glycerophosphoryl diester phosphodiesterase
BJ961_RS26580	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BJ961_RS26590	COG2313	pseudouridylate synthase activity
BJ961_RS26600	COG2226	methyltransferase
BJ961_RS26680	COG2267	carboxylic ester hydrolase activity
BJ961_RS26700	COG2226	methyltransferase
BJ961_RS26715	COG0237	dephospho-CoA kinase activity
BJ961_RS26730	COG2226	methyltransferase
BJ961_RS26735	COG1643	Atp-dependent helicase
BJ961_RS26765	COG2050	protein possibly involved in aromatic compounds catabolism
BJ961_RS26820	COG0737	Belongs to the 5'-nucleotidase family
BJ961_RS26840	COG0287	Prephenate dehydrogenase
BJ961_RS26840	COG1605	Chorismate mutase
BJ961_RS26855	COG2304	oxidoreductase activity
BJ961_RS26875	COG0067	glutamate synthase
BJ961_RS26875	COG0069	glutamate synthase activity
BJ961_RS26875	COG0070	glutamate synthase
BJ961_RS26885	COG1397	ADP-ribosylglycohydrolase
BJ961_RS26905	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJ961_RS26910	COG2301	Belongs to the HpcH HpaI aldolase family
BJ961_RS26915	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BJ961_RS26925	COG0159	tryptophan synthase activity
BJ961_RS26930	COG0133	tryptophan synthase activity
BJ961_RS26940	COG0134	indole-3-glycerol-phosphate synthase activity
BJ961_RS26965	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BJ961_RS26985	COG0107	imidazoleglycerol-phosphate synthase activity
BJ961_RS26990	COG0251	oxidation-reduction process
BJ961_RS26995	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BJ961_RS27000	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BJ961_RS27010	COG0131	Imidazoleglycerol-phosphate dehydratase
BJ961_RS27015	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BJ961_RS27020	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BJ961_RS27040	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BJ961_RS27060	COG1432	Conserved Protein
BJ961_RS27070	COG0587	DNA-directed DNA polymerase activity
BJ961_RS27105	COG0025	NhaP-type Na H and K H
BJ961_RS27120	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BJ961_RS27130	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BJ961_RS27135	COG3599	regulation of cell shape
BJ961_RS27145	COG1799	cell septum assembly
BJ961_RS27155	COG1496	oxidoreductase activity
BJ961_RS27160	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BJ961_RS27165	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BJ961_RS27170	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BJ961_RS27180	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BJ961_RS27185	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJ961_RS27195	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BJ961_RS27210	COG0275	rRNA processing
BJ961_RS27220	COG0714	Associated with various cellular activities
BJ961_RS27250	COG1309	transcriptional regulator
BJ961_RS27270	COG0352	thiamine-phosphate diphosphorylase activity
BJ961_RS27285	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJ961_RS27285	COG2022	thiamine diphosphate biosynthetic process
BJ961_RS27295	COG2022	thiamine diphosphate biosynthetic process
BJ961_RS27305	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BJ961_RS27310	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BJ961_RS27315	COG2193	ferroxidase activity
BJ961_RS27325	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
BJ961_RS27335	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BJ961_RS27340	COG0205	6-phosphofructokinase activity
BJ961_RS27350	COG4585	Histidine kinase
BJ961_RS27375	COG1940	carbohydrate kinase activity
BJ961_RS27385	COG0003	Pfam Anion-transporting ATPase
BJ961_RS27405	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS27455	COG2205	protein histidine kinase activity
BJ961_RS27460	COG0745	RESPONSE REGULATOR receiver
BJ961_RS27470	COG1929	Belongs to the glycerate kinase type-1 family
BJ961_RS27475	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BJ961_RS27480	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BJ961_RS27485	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BJ961_RS27490	COG0723	plastoquinol--plastocyanin reductase activity
BJ961_RS27495	COG2010	Cytochrome c
BJ961_RS27500	COG1845	cytochrome c oxidase, subunit III
BJ961_RS27510	COG1376	ErfK ybiS ycfS ynhG family protein
BJ961_RS27520	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BJ961_RS27525	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BJ961_RS27535	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJ961_RS27555	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BJ961_RS27565	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJ961_RS27570	COG2197	response regulator
BJ961_RS27575	COG4585	Histidine kinase
BJ961_RS27595	COG2226	methyltransferase
BJ961_RS27600	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJ961_RS27620	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BJ961_RS27630	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BJ961_RS27640	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BJ961_RS27645	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BJ961_RS27650	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJ961_RS27660	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BJ961_RS27690	COG1090	epimerase
BJ961_RS27750	COG0321	lipoyl(octanoyl) transferase activity
BJ961_RS27755	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BJ961_RS27775	COG0174	glutamine synthetase
BJ961_RS27785	COG0501	Belongs to the peptidase M48B family
BJ961_RS27830	COG0745	RESPONSE REGULATOR receiver
BJ961_RS27845	COG2197	response regulator
BJ961_RS27875	COG1309	transcriptional regulator
BJ961_RS27900	COG1620	l-lactate permease
BJ961_RS27905	COG0247	lactate metabolic process
BJ961_RS27910	COG1139	Iron-sulfur cluster binding protein
BJ961_RS27915	COG1556	Lactate utilization protein
BJ961_RS27920	COG0366	Alpha amylase catalytic
BJ961_RS27925	COG3833	ABC-type maltose transport systems, permease component
BJ961_RS27930	COG1175	transmembrane transport
BJ961_RS27935	COG1653	transport
BJ961_RS27940	COG1609	Transcriptional regulator
BJ961_RS27950	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BJ961_RS27955	COG2161	toxin-antitoxin pair type II binding
BJ961_RS27960	COG4115	mRNA cleavage
BJ961_RS27965	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BJ961_RS27965	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BJ961_RS27980	COG0174	glutamine synthetase
BJ961_RS28015	COG0667	Aldo Keto reductase
BJ961_RS28070	COG0477	Major facilitator Superfamily
BJ961_RS28075	COG2814	Major facilitator Superfamily
BJ961_RS28085	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BJ961_RS28110	COG1994	Peptidase M50
BJ961_RS28150	COG0384	phenazine biosynthesis protein PhzF
BJ961_RS28185	COG2197	response regulator
BJ961_RS28195	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BJ961_RS28200	COG2814	Major facilitator Superfamily
BJ961_RS28210	COG3540	Alkaline phosphatase
BJ961_RS28215	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS28255	COG2815	serine threonine protein kinase
BJ961_RS28255	COG0515	serine threonine protein kinase
BJ961_RS28260	COG0515	serine threonine protein kinase
BJ961_RS28300	COG3022	response to hydroperoxide
BJ961_RS28305	COG0800	Aldolase
BJ961_RS28320	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BJ961_RS28335	COG2030	dehydratase
BJ961_RS28340	COG1131	(ABC) transporter
BJ961_RS28350	COG4585	Histidine kinase
BJ961_RS28355	COG2197	response regulator
BJ961_RS28365	COG0477	Major facilitator Superfamily
BJ961_RS28400	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS28405	COG1309	transcriptional regulator
BJ961_RS28425	COG3845	ABC transporter
BJ961_RS28490	COG4122	O-methyltransferase activity
BJ961_RS28530	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJ961_RS28600	COG4585	Histidine kinase
BJ961_RS28605	COG0586	Pfam SNARE associated Golgi protein
BJ961_RS28615	COG1358	cellular component organization or biogenesis
BJ961_RS28660	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BJ961_RS28670	COG0477	Major facilitator Superfamily
BJ961_RS28675	COG1309	transcriptional regulator
BJ961_RS28690	COG0667	Aldo Keto reductase
BJ961_RS28695	COG0789	Transcriptional regulator
BJ961_RS28735	COG1741	Belongs to the pirin family
BJ961_RS28750	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BJ961_RS28755	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BJ961_RS28760	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJ961_RS28790	COG1764	response to oxidative stress
BJ961_RS28795	COG2130	NADP-dependent
BJ961_RS28860	COG4214	carbohydrate transport
BJ961_RS28870	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BJ961_RS28905	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BJ961_RS28930	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BJ961_RS28940	COG1127	ABC transporter
BJ961_RS28965	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BJ961_RS29005	COG3386	PFAM SMP-30 Gluconolaconase
BJ961_RS29010	COG1414	Transcriptional regulator
BJ961_RS29020	COG2186	Transcriptional regulator
BJ961_RS29030	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS29035	COG0825	malonyl-CoA metabolic process
BJ961_RS29035	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BJ961_RS29040	COG1404	Belongs to the peptidase S8 family
BJ961_RS29060	COG2815	serine threonine protein kinase
BJ961_RS29060	COG0515	serine threonine protein kinase
BJ961_RS29065	COG1077	Cell shape determining protein MreB Mrl
BJ961_RS29125	COG1070	Carbohydrate kinase
BJ961_RS29145	COG0358	DNA primase activity
BJ961_RS29155	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BJ961_RS29165	COG2949	membrane
BJ961_RS29170	COG0243	molybdopterin cofactor binding
BJ961_RS29175	COG0583	DNA-binding transcription factor activity
BJ961_RS29180	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS29235	COG0789	Transcriptional regulator
BJ961_RS29260	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BJ961_RS29265	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BJ961_RS29265	COG2146	nitrite reductase [NAD(P)H] activity
BJ961_RS29275	COG1309	transcriptional regulator
BJ961_RS29280	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS29295	COG0574	Belongs to the PEP-utilizing enzyme family
BJ961_RS29295	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BJ961_RS29320	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BJ961_RS29340	COG0477	Major facilitator Superfamily
BJ961_RS29350	COG0423	glycine-tRNA ligase activity
BJ961_RS29355	COG0803	Belongs to the bacterial solute-binding protein 9 family
BJ961_RS29355	COG3443	Belongs to the bacterial solute-binding protein 9 family
BJ961_RS29360	COG1121	(ABC) transporter
BJ961_RS29365	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJ961_RS29375	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BJ961_RS29380	COG1381	Involved in DNA repair and RecF pathway recombination
BJ961_RS29405	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJ961_RS29415	COG2197	response regulator
BJ961_RS29420	COG3851	Histidine kinase
BJ961_RS29465	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BJ961_RS29490	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BJ961_RS29500	COG2315	Protein conserved in bacteria
BJ961_RS29510	COG2205	protein histidine kinase activity
BJ961_RS29525	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BJ961_RS29540	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJ961_RS29545	COG4948	Mandelate Racemase Muconate Lactonizing
BJ961_RS29555	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BJ961_RS29560	COG1234	tRNA 3'-trailer cleavage
BJ961_RS29565	COG0537	adenosine 5'-monophosphoramidase activity
BJ961_RS29570	COG0793	Belongs to the peptidase S41A family
BJ961_RS29570	COG4946	Tricorn protease homolog
BJ961_RS29595	COG0484	heat shock protein binding
BJ961_RS29600	COG1420	regulation of RNA biosynthetic process
BJ961_RS29630	COG0481	GTPase activity
BJ961_RS29635	COG0268	Binds directly to 16S ribosomal RNA
BJ961_RS29650	COG2353	YceI-like domain
BJ961_RS29660	COG0778	Nitroreductase
BJ961_RS29665	COG1309	transcriptional regulator
BJ961_RS29670	COG1234	tRNA 3'-trailer cleavage
BJ961_RS29680	COG1307	EDD domain protein, DegV family
BJ961_RS29690	COG0495	leucyl-tRNA aminoacylation
BJ961_RS29700	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BJ961_RS29725	COG0588	phosphoglycerate mutase activity
BJ961_RS29730	COG0799	negative regulation of ribosome biogenesis
BJ961_RS29740	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BJ961_RS29755	COG0501	Belongs to the peptidase M48B family
BJ961_RS29770	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BJ961_RS29780	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BJ961_RS29790	COG1216	Glycosyl transferase, family 2
BJ961_RS29795	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BJ961_RS29800	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BJ961_RS29805	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BJ961_RS29810	COG0371	Dehydrogenase
BJ961_RS29815	COG1530	ribonuclease E activity
BJ961_RS29835	COG0772	Belongs to the SEDS family
BJ961_RS29840	COG0768	penicillin binding
BJ961_RS29855	COG1077	Cell shape determining protein MreB Mrl
BJ961_RS29860	COG0105	UTP biosynthetic process
BJ961_RS29870	COG0285	dihydrofolate synthase activity
BJ961_RS29875	COG0525	valine-tRNA ligase activity
BJ961_RS29885	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BJ961_RS29890	COG0740	serine-type endopeptidase activity
BJ961_RS29895	COG0740	serine-type endopeptidase activity
BJ961_RS29900	COG0544	peptidyl-prolyl cis-trans isomerase activity
BJ961_RS29980	COG1051	belongs to the nudix hydrolase family
BJ961_RS29990	COG3594	Acyltransferase
BJ961_RS30005	COG4552	Acetyltransferase involved in intracellular survival and related
BJ961_RS30020	COG1268	BioY protein
BJ961_RS30025	COG1113	amino acid transport
BJ961_RS30030	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BJ961_RS30035	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BJ961_RS30090	COG0697	spore germination
BJ961_RS30095	COG1846	Transcriptional regulator
BJ961_RS30115	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJ961_RS30125	COG0668	transmembrane transport
BJ961_RS30140	COG1653	transport
BJ961_RS30145	COG1175	transmembrane transport
BJ961_RS30150	COG0395	ABC-type sugar transport system, permease component
BJ961_RS30155	COG1486	melibiose metabolic process
BJ961_RS30170	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJ961_RS30180	COG0515	serine threonine protein kinase
BJ961_RS30200	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJ961_RS30220	COG0577	efflux transmembrane transporter activity
BJ961_RS30220	COG1136	(ABC) transporter
BJ961_RS30255	COG0629	single-stranded DNA binding
BJ961_RS30275	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BJ961_RS30290	COG2304	oxidoreductase activity
BJ961_RS30320	COG0297	glycogen (starch) synthase activity
BJ961_RS30345	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS30390	COG1022	Amp-dependent synthetase and ligase
BJ961_RS30400	COG1131	(ABC) transporter
BJ961_RS30420	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJ961_RS30440	COG0702	epimerase
BJ961_RS30445	COG0583	DNA-binding transcription factor activity
BJ961_RS30455	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BJ961_RS30495	COG1595	DNA-templated transcription, initiation
BJ961_RS30520	COG1129	ABC transporter
BJ961_RS30525	COG1879	ABC-type sugar transport system periplasmic component
BJ961_RS30530	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJ961_RS30535	COG1869	D-ribose catabolic process
BJ961_RS30550	COG0673	inositol 2-dehydrogenase activity
BJ961_RS30555	COG1609	Transcriptional regulator
BJ961_RS30570	COG1472	Belongs to the glycosyl hydrolase 3 family
BJ961_RS30630	COG2356	endonuclease I
BJ961_RS30645	COG0028	Belongs to the TPP enzyme family
BJ961_RS30660	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BJ961_RS30665	COG0575	Belongs to the CDS family
BJ961_RS30670	COG0204	Acyl-transferase
BJ961_RS30675	COG1946	Acyl-CoA thioesterase
BJ961_RS30685	COG1309	transcriptional regulator
BJ961_RS30690	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BJ961_RS30705	COG1960	acyl-CoA dehydrogenase activity
BJ961_RS30725	COG3486	L-lysine 6-monooxygenase (NADPH) activity
BJ961_RS30760	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJ961_RS30765	COG0589	response to stress
BJ961_RS30775	COG4977	sequence-specific DNA binding
BJ961_RS30780	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BJ961_RS30800	COG0395	ABC-type sugar transport system, permease component
BJ961_RS30825	COG3469	chitinase activity
BJ961_RS30835	COG0745	RESPONSE REGULATOR receiver
BJ961_RS30845	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BJ961_RS30890	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BJ961_RS30905	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJ961_RS30965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJ961_RS30970	COG0765	amino acid transport
BJ961_RS30975	COG0765	amino acid transport
BJ961_RS30980	COG1126	abc transporter atp-binding protein
BJ961_RS30995	COG3397	chitin binding
BJ961_RS31065	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJ961_RS31075	COG2188	Transcriptional regulator
BJ961_RS31085	COG0673	inositol 2-dehydrogenase activity
BJ961_RS31090	COG4702	Belongs to the UPF0303 family
BJ961_RS31165	COG0270	DNA (cytosine-5-)-methyltransferase activity
BJ961_RS31205	COG1074	ATP-dependent DNA helicase activity
BJ961_RS31270	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJ961_RS31275	COG2815	serine threonine protein kinase
BJ961_RS31275	COG0515	serine threonine protein kinase
BJ961_RS31295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJ961_RS31315	COG1309	transcriptional regulator
BJ961_RS31350	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJ961_RS31375	COG2733	membrane
BJ961_RS31390	COG4555	ABC transporter
BJ961_RS31405	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BJ961_RS31445	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BJ961_RS31455	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BJ961_RS31460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJ961_RS31465	COG1263	PTS System
BJ961_RS31470	COG1263	PTS System
BJ961_RS31475	COG1234	tRNA 3'-trailer cleavage
BJ961_RS31500	COG1113	amino acid transport
BJ961_RS31510	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BJ961_RS31520	COG1335	isochorismatase
BJ961_RS31540	COG1714	RDD family
BJ961_RS31560	COG0277	FAD linked oxidase domain protein
BJ961_RS31570	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BJ961_RS31580	COG1174	glycine betaine transport
BJ961_RS31590	COG1174	glycine betaine transport
BJ961_RS31600	COG3480	Lon protease (S16) C-terminal proteolytic domain
BJ961_RS31625	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BJ961_RS31680	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BJ961_RS31695	COG3525	Glycosyl hydrolase, family 20, catalytic domain
BJ961_RS31700	COG0395	ABC-type sugar transport system, permease component
BJ961_RS31705	COG1175	transmembrane transport
BJ961_RS31720	COG1678	Uncharacterized ACR, COG1678
BJ961_RS31725	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BJ961_RS31730	COG0776	regulation of translation
BJ961_RS31740	COG3973	AAA domain
BJ961_RS31770	COG2223	nitrite transmembrane transporter activity
BJ961_RS31810	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BJ961_RS31815	COG0793	Belongs to the peptidase S41A family
BJ961_RS31825	COG2884	Cell division ATP-binding protein ftsE
BJ961_RS31840	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BJ961_RS31845	COG0515	serine threonine protein kinase
BJ961_RS31850	COG0515	serine threonine protein kinase
BJ961_RS31880	COG1175	transmembrane transport
BJ961_RS31885	COG0395	ABC-type sugar transport system, permease component
BJ961_RS31895	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BJ961_RS31915	COG1764	response to oxidative stress
BJ961_RS31920	COG1846	Transcriptional regulator
BJ961_RS31935	COG2318	DinB family
BJ961_RS31970	COG1134	teichoic acid transport
BJ961_RS31975	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BJ961_RS31980	COG1216	Glycosyl transferase, family 2
BJ961_RS31980	COG1442	glycosyl transferase family 8
BJ961_RS31990	COG2902	Dehydrogenase
BJ961_RS32010	COG0653	protein targeting
BJ961_RS32020	COG3214	Protein conserved in bacteria
BJ961_RS32025	COG2197	response regulator
BJ961_RS32030	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BJ961_RS32040	COG0823	Involved in the tonB-independent uptake of proteins
BJ961_RS32045	COG5000	phosphorelay sensor kinase activity
BJ961_RS32045	COG5002	protein histidine kinase activity
BJ961_RS32050	COG0745	RESPONSE REGULATOR receiver
BJ961_RS32075	COG0714	Associated with various cellular activities
BJ961_RS32080	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BJ961_RS32115	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BJ961_RS32125	COG1482	cell wall glycoprotein biosynthetic process
BJ961_RS32135	COG2835	tetraacyldisaccharide 4'-kinase activity
BJ961_RS32145	COG1620	l-lactate permease
BJ961_RS32180	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BJ961_RS32185	COG0778	Nitroreductase
BJ961_RS32185	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
BJ961_RS32210	COG1316	TRANSCRIPTIONal
BJ961_RS32215	COG1316	TRANSCRIPTIONal
BJ961_RS32220	COG1316	TRANSCRIPTIONal
BJ961_RS32225	COG1316	TRANSCRIPTIONal
BJ961_RS32230	COG1316	TRANSCRIPTIONal
BJ961_RS32240	COG1316	TRANSCRIPTIONal
BJ961_RS32245	COG1316	TRANSCRIPTIONal
BJ961_RS32265	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BJ961_RS32310	COG2205	protein histidine kinase activity
BJ961_RS32315	COG0745	RESPONSE REGULATOR receiver
BJ961_RS32320	COG3104	oligopeptide transport
BJ961_RS32335	COG1366	Belongs to the anti-sigma-factor antagonist family
BJ961_RS32340	COG1191	sigma factor activity
BJ961_RS32345	COG1228	amidohydrolase
BJ961_RS32355	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BJ961_RS32360	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BJ961_RS32385	COG2755	lipolytic protein G-D-S-L family
BJ961_RS32390	COG0183	Belongs to the thiolase family
BJ961_RS32425	COG0829	nickel cation binding
BJ961_RS32430	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BJ961_RS32440	COG0804	urea catabolic process
BJ961_RS32445	COG0832	Belongs to the urease beta subunit family
BJ961_RS32455	COG0831	urea catabolic process
BJ961_RS32465	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BJ961_RS32470	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BJ961_RS32495	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BJ961_RS32505	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS32515	COG1136	(ABC) transporter
BJ961_RS32520	COG0577	efflux transmembrane transporter activity
BJ961_RS32520	COG1136	(ABC) transporter
BJ961_RS32525	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BJ961_RS32530	COG1252	NADH dehydrogenase
BJ961_RS32550	COG0148	phosphopyruvate hydratase activity
BJ961_RS32620	COG0577	efflux transmembrane transporter activity
BJ961_RS32625	COG1136	(ABC) transporter
BJ961_RS32660	COG4585	Histidine kinase
BJ961_RS32675	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BJ961_RS32680	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BJ961_RS32685	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BJ961_RS32690	COG0193	aminoacyl-tRNA hydrolase activity
BJ961_RS32700	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BJ961_RS32710	COG1309	transcriptional regulator
BJ961_RS32725	COG4106	trans-aconitate 2-methyltransferase activity
BJ961_RS32735	COG2197	response regulator
BJ961_RS32745	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BJ961_RS32785	COG0488	(ABC) transporter
BJ961_RS32790	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BJ961_RS32795	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BJ961_RS32805	COG0084	hydrolase, TatD family'
BJ961_RS32880	COG0310	cobalt ion transport
BJ961_RS32890	COG1122	ATPase activity
BJ961_RS32895	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BJ961_RS32910	COG0442	prolyl-tRNA aminoacylation
BJ961_RS32915	COG2409	Drug exporters of the RND superfamily
BJ961_RS32925	COG0793	Belongs to the peptidase S41A family
BJ961_RS32925	COG4946	Tricorn protease homolog
BJ961_RS32940	COG2267	carboxylic ester hydrolase activity
BJ961_RS32945	COG2072	flavoprotein involved in K transport
BJ961_RS32955	COG0708	Exodeoxyribonuclease III
BJ961_RS32975	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJ961_RS32980	COG0521	Mo-molybdopterin cofactor biosynthetic process
BJ961_RS32980	COG0315	cyclic pyranopterin monophosphate synthase activity
BJ961_RS32985	COG0315	cyclic pyranopterin monophosphate synthase activity
BJ961_RS32995	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BJ961_RS33000	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BJ961_RS33025	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BJ961_RS33055	COG1376	ErfK ybiS ycfS ynhG family protein
BJ961_RS33065	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJ961_RS33065	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJ961_RS33065	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJ961_RS33070	COG1105	Belongs to the carbohydrate kinase PfkB family
BJ961_RS33075	COG1349	DNA-binding transcription factor activity
BJ961_RS33080	COG0477	Major facilitator Superfamily
BJ961_RS33095	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BJ961_RS33100	COG1247	-acetyltransferase
BJ961_RS33105	COG3384	dioxygenase
BJ961_RS33110	COG1846	Transcriptional regulator
BJ961_RS33130	COG1414	Transcriptional regulator
BJ961_RS33150	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BJ961_RS33165	COG3795	YCII-related domain
BJ961_RS33170	COG4941	Belongs to the sigma-70 factor family
BJ961_RS33190	COG0386	Belongs to the glutathione peroxidase family
BJ961_RS33215	COG1686	Belongs to the peptidase S11 family
BJ961_RS33270	COG2319	Wd-40 repeat
BJ961_RS33275	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
BJ961_RS33295	COG3629	intracellular signal transduction
BJ961_RS33295	COG3903	Transcriptional regulator
BJ961_RS33315	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJ961_RS33315	COG0515	serine threonine protein kinase
BJ961_RS33325	COG1309	transcriptional regulator
BJ961_RS33335	COG0259	pyridoxamine-phosphate oxidase activity
BJ961_RS33345	COG2072	flavoprotein involved in K transport
BJ961_RS33355	COG2271	Major facilitator Superfamily
BJ961_RS33375	COG1366	Belongs to the anti-sigma-factor antagonist family
BJ961_RS33430	COG2945	thiolester hydrolase activity
BJ961_RS33430	COG0596	Alpha beta hydrolase
BJ961_RS33440	COG4821	SIS domain
BJ961_RS33450	COG0251	oxidation-reduction process
BJ961_RS33460	COG0259	pyridoxamine-phosphate oxidase activity
BJ961_RS33475	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS33490	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BJ961_RS33515	COG2318	DinB family
BJ961_RS33545	COG0247	lactate metabolic process
BJ961_RS33545	COG0277	FAD linked oxidase domain protein
BJ961_RS33550	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BJ961_RS33575	COG2197	response regulator
BJ961_RS33620	COG0667	Aldo Keto reductase
BJ961_RS33645	COG2252	PERMEase
BJ961_RS33655	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BJ961_RS33670	COG2814	Major facilitator Superfamily
BJ961_RS33680	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BJ961_RS33685	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
BJ961_RS33690	COG1278	Cold shock
BJ961_RS33715	COG1061	Type III restriction enzyme res subunit
BJ961_RS33725	COG3973	AAA domain
BJ961_RS33765	COG1737	Transcriptional regulator
BJ961_RS33770	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BJ961_RS33785	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS33790	COG1309	transcriptional regulator
BJ961_RS33805	COG0459	protein refolding
BJ961_RS33810	COG1278	Cold shock
BJ961_RS33825	COG0463	Glycosyl transferase, family 2
BJ961_RS33830	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
BJ961_RS33865	COG1105	Belongs to the carbohydrate kinase PfkB family
BJ961_RS33890	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BJ961_RS33905	COG0494	nUDIX hydrolase
BJ961_RS33985	COG0464	growth
BJ961_RS34085	COG3842	ATPase activity
BJ961_RS34160	COG0215	cysteine-tRNA ligase activity
BJ961_RS34165	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BJ961_RS34170	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BJ961_RS34175	COG1329	Transcriptional regulator
BJ961_RS34190	COG5002	protein histidine kinase activity
BJ961_RS34240	COG2188	Transcriptional regulator
BJ961_RS34270	COG4974	Belongs to the 'phage' integrase family
BJ961_RS34280	COG0588	phosphoglycerate mutase activity
BJ961_RS34305	COG0438	transferase activity, transferring glycosyl groups
BJ961_RS34365	COG0546	phosphoglycolate phosphatase activity
BJ961_RS34380	COG2186	Transcriptional regulator
BJ961_RS34395	COG4552	Acetyltransferase involved in intracellular survival and related
BJ961_RS34410	COG1490	D-aminoacyl-tRNA deacylase activity
BJ961_RS34415	COG0354	folic acid binding
BJ961_RS34420	COG0735	belongs to the Fur family
BJ961_RS34425	COG3485	protocatechuate 3,4-dioxygenase
BJ961_RS34520	COG0745	RESPONSE REGULATOR receiver
BJ961_RS34525	COG1609	Transcriptional regulator
BJ961_RS34530	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJ961_RS34535	COG0745	RESPONSE REGULATOR receiver
BJ961_RS34570	COG0737	Belongs to the 5'-nucleotidase family
BJ961_RS34575	COG0456	acetyltransferase
BJ961_RS34605	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BJ961_RS34615	COG0494	nUDIX hydrolase
BJ961_RS34615	COG0406	alpha-ribazole phosphatase activity
BJ961_RS34635	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BJ961_RS34640	COG0306	phosphate transporter
BJ961_RS34650	COG1937	Protein conserved in bacteria
BJ961_RS34665	COG0277	FAD linked oxidase domain protein
BJ961_RS34670	COG0671	phosphoesterase, PA-phosphatase related
BJ961_RS34675	COG1196	nuclear chromosome segregation
BJ961_RS34675	COG0741	lytic transglycosylase activity
BJ961_RS34675	COG0739	heme binding
BJ961_RS34720	COG4585	Histidine kinase
BJ961_RS34725	COG2197	response regulator
BJ961_RS34745	COG1846	Transcriptional regulator
BJ961_RS34760	COG1252	NADH dehydrogenase
BJ961_RS34790	COG0579	oxidoreductase
BJ961_RS34800	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BJ961_RS34830	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BJ961_RS34830	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BJ961_RS34865	COG1473	amidohydrolase
BJ961_RS34875	COG2860	membrane
BJ961_RS34910	COG0513	Belongs to the DEAD box helicase family
BJ961_RS34945	COG1643	Atp-dependent helicase
BJ961_RS34980	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BJ961_RS35015	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BJ961_RS35020	COG0047	phosphoribosylformylglycinamidine synthase activity
BJ961_RS35025	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BJ961_RS35060	COG2197	response regulator
BJ961_RS35070	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BJ961_RS35085	COG0151	Belongs to the GarS family
BJ961_RS35110	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS35125	COG1028	Short-chain dehydrogenase reductase Sdr
BJ961_RS35180	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BJ961_RS35215	COG1191	sigma factor activity
BJ961_RS35220	COG1191	sigma factor activity
BJ961_RS35240	COG2353	YceI-like domain
BJ961_RS35260	COG3467	pyridoxamine 5'-phosphate
BJ961_RS35280	COG2205	protein histidine kinase activity
BJ961_RS35285	COG0745	RESPONSE REGULATOR receiver
BJ961_RS35300	COG1733	regulation of RNA biosynthetic process
BJ961_RS35305	COG0768	penicillin binding
BJ961_RS35330	COG1309	transcriptional regulator
BJ961_RS35335	COG2814	Major facilitator Superfamily
BJ961_RS35340	COG0318	PFAM AMP-dependent synthetase and ligase
BJ961_RS35345	COG1595	DNA-templated transcription, initiation
BJ961_RS35395	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BJ961_RS35405	COG0215	cysteine-tRNA ligase activity
BJ961_RS35430	COG1725	Transcriptional regulator
BJ961_RS35485	COG1309	transcriptional regulator
BJ961_RS35495	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJ961_RS35510	COG0653	protein targeting
BJ961_RS35530	COG0006	proline dipeptidase activity
BJ961_RS35550	COG1999	signal sequence binding
BJ961_RS35565	COG2837	iron assimilation
BJ961_RS35570	COG0077	Prephenate dehydratase
BJ961_RS35575	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BJ961_RS35580	COG0561	phosphatase activity
BJ961_RS35615	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
BJ961_RS35630	COG0561	phosphatase activity
BJ961_RS35645	COG4988	ABC transporter
BJ961_RS35650	COG1294	oxidase, subunit
BJ961_RS35655	COG1271	oxidase subunit
BJ961_RS35660	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BJ961_RS35665	COG1609	Transcriptional regulator
BJ961_RS35685	COG1733	regulation of RNA biosynthetic process
BJ961_RS35695	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BJ961_RS35720	COG0662	Cupin 2, conserved barrel domain protein
BJ961_RS35725	COG1950	PFAM Membrane protein of
BJ961_RS35730	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BJ961_RS35735	COG0626	cystathionine gamma-synthase activity
BJ961_RS35760	COG2814	Major facilitator Superfamily
BJ961_RS35780	COG0305	Participates in initiation and elongation during chromosome replication
BJ961_RS35790	COG0359	binds to the 23S rRNA
BJ961_RS35795	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BJ961_RS35800	COG0629	single-stranded DNA binding
BJ961_RS35805	COG0360	Binds together with S18 to 16S ribosomal RNA
BJ961_RS35830	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BJ961_RS35855	COG0617	tRNA 3'-terminal CCA addition
BJ961_RS35875	COG1595	DNA-templated transcription, initiation
BJ961_RS35885	COG0492	ferredoxin-NADP+ reductase activity
BJ961_RS35890	COG3118	belongs to the thioredoxin family
BJ961_RS35905	COG1192	Involved in chromosome partitioning
BJ961_RS35910	COG0357	Ribosomal RNA small subunit methyltransferase G
BJ961_RS35920	COG0706	membrane insertase activity
BJ961_RS35925	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BJ961_RS35930	COG0594	ribonuclease P activity
BJ961_RS35935	COG0230	Belongs to the bacterial ribosomal protein bL34 family