locus-tag class description DNK48_RS00050 PF17676 LD-carboxypeptidase C-terminal domain DNK48_RS00050 PF02016 LD-carboxypeptidase N-terminal domain DNK48_RS00070 PF01609 Transposase DDE domain DNK48_RS00150 PF03621 MbtH-like protein DNK48_RS00160 PF00501 AMP-binding enzyme DNK48_RS00160 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS00165 PF00501 AMP-binding enzyme DNK48_RS00165 PF00668 Condensation domain DNK48_RS00165 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS00165 PF00550 Phosphopantetheine attachment site DNK48_RS00175 PF14765 Polyketide synthase dehydratase DNK48_RS00175 PF00550 Phosphopantetheine attachment site DNK48_RS00175 PF08659 KR domain DNK48_RS00175 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS00175 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS00175 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS00175 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS00175 PF00698 Acyl transferase domain DNK48_RS00195 PF12833 Helix-turn-helix domain DNK48_RS00195 PF01965 DJ-1/PfpI family DNK48_RS00200 PF01965 DJ-1/PfpI family DNK48_RS00220 PF01566 Natural resistance-associated macrophage protein DNK48_RS00220 PF03358 NADPH-dependent FMN reductase DNK48_RS00225 PF00180 Isocitrate/isopropylmalate dehydrogenase DNK48_RS00225 PF03737 Aldolase/RraA DNK48_RS00230 PF00296 Luciferase-like monooxygenase DNK48_RS00235 PF03358 NADPH-dependent FMN reductase DNK48_RS00240 PF00391 PEP-utilising enzyme, mobile domain DNK48_RS00240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DNK48_RS00255 PF00348 Polyprenyl synthetase DNK48_RS00290 PF01011 PQQ enzyme repeat DNK48_RS00290 PF13360 PQQ-like domain DNK48_RS00290 PF00069 Protein kinase domain DNK48_RS00290 PF13570 PQQ-like domain DNK48_RS00335 PF07729 FCD domain DNK48_RS00335 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS00340 PF00155 Aminotransferase class I and II DNK48_RS00360 PF00248 Aldo/keto reductase family DNK48_RS00370 PF00180 Isocitrate/isopropylmalate dehydrogenase DNK48_RS00385 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS00390 PF08402 TOBE domain DNK48_RS00390 PF00005 ABC transporter DNK48_RS00395 PF00083 Sugar (and other) transporter DNK48_RS00395 PF08946 Osmosensory transporter coiled coil DNK48_RS00405 PF02615 Malate/L-lactate dehydrogenase DNK48_RS00420 PF00106 short chain dehydrogenase DNK48_RS00425 PF12697 Alpha/beta hydrolase family DNK48_RS00430 PF14759 Reductase C-terminal DNK48_RS00430 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS00435 PF00355 Rieske [2Fe-2S] domain DNK48_RS00440 PF00866 Ring hydroxylating beta subunit DNK48_RS00445 PF00355 Rieske [2Fe-2S] domain DNK48_RS00445 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DNK48_RS00450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS00455 PF17925 Tetracyclin repressor-like, C-terminal domain DNK48_RS00455 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS00520 PF13472 GDSL-like Lipase/Acylhydrolase family DNK48_RS00540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS00540 PF00005 ABC transporter DNK48_RS00545 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS00545 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS00550 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS00555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS00565 PF07690 Major Facilitator Superfamily DNK48_RS00570 PF00248 Aldo/keto reductase family DNK48_RS00575 PF00248 Aldo/keto reductase family DNK48_RS00585 PF00296 Luciferase-like monooxygenase DNK48_RS00590 PF00881 Nitroreductase family DNK48_RS00595 PF00296 Luciferase-like monooxygenase DNK48_RS00610 PF00296 Luciferase-like monooxygenase DNK48_RS00625 PF02525 Flavodoxin-like fold DNK48_RS00630 PF01638 HxlR-like helix-turn-helix DNK48_RS00655 PF00550 Phosphopantetheine attachment site DNK48_RS00655 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS00655 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS00655 PF14765 Polyketide synthase dehydratase DNK48_RS00655 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS00655 PF08659 KR domain DNK48_RS00655 PF08990 Erythronolide synthase docking DNK48_RS00655 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS00655 PF00698 Acyl transferase domain DNK48_RS00710 PF17754 MftR C-terminal domain DNK48_RS00710 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS00730 PF00106 short chain dehydrogenase DNK48_RS00745 PF00106 short chain dehydrogenase DNK48_RS00755 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS00755 PF01799 [2Fe-2S] binding domain DNK48_RS00755 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNK48_RS00760 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS00760 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS00765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS00765 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS00770 PF00230 Major intrinsic protein DNK48_RS00790 PF00175 Oxidoreductase NAD-binding domain DNK48_RS00790 PF00970 Oxidoreductase FAD-binding domain DNK48_RS00790 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS00830 PF13378 Enolase C-terminal domain-like DNK48_RS00830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS00845 PF00330 Aconitase family (aconitate hydratase) DNK48_RS00850 PF00694 Aconitase C-terminal domain DNK48_RS00865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS00865 PF01842 ACT domain DNK48_RS00865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS00870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS00870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS00895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNK48_RS00905 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS00915 PF12146 Serine aminopeptidase, S33 DNK48_RS00920 PF12697 Alpha/beta hydrolase family DNK48_RS00945 PF03079 ARD/ARD' family DNK48_RS00960 PF00106 short chain dehydrogenase DNK48_RS00960 PF00561 alpha/beta hydrolase fold DNK48_RS00970 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS00975 PF00682 HMGL-like DNK48_RS00985 PF00701 Dihydrodipicolinate synthetase family DNK48_RS00995 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DNK48_RS01005 PF08264 Anticodon-binding domain of tRNA DNK48_RS01005 PF09334 tRNA synthetases class I (M) DNK48_RS01020 PF00733 Asparagine synthase DNK48_RS01020 PF13537 Glutamine amidotransferase domain DNK48_RS01025 PF00931 NB-ARC domain DNK48_RS01025 PF03704 Bacterial transcriptional activator domain DNK48_RS01025 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS01030 PF07993 Male sterility protein DNK48_RS01030 PF00550 Phosphopantetheine attachment site DNK48_RS01030 PF00501 AMP-binding enzyme DNK48_RS01030 PF00668 Condensation domain DNK48_RS01030 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS01035 PF00668 Condensation domain DNK48_RS01035 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS01035 PF00550 Phosphopantetheine attachment site DNK48_RS01035 PF00501 AMP-binding enzyme DNK48_RS01045 PF00668 Condensation domain DNK48_RS01045 PF00550 Phosphopantetheine attachment site DNK48_RS01045 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS01045 PF00501 AMP-binding enzyme DNK48_RS01055 PF07690 Major Facilitator Superfamily DNK48_RS01060 PF01472 PUA domain DNK48_RS01060 PF00696 Amino acid kinase family DNK48_RS01065 PF00171 Aldehyde dehydrogenase family DNK48_RS01070 PF00155 Aminotransferase class I and II DNK48_RS01085 PF00550 Phosphopantetheine attachment site DNK48_RS01085 PF14765 Polyketide synthase dehydratase DNK48_RS01085 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS01085 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS01085 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS01085 PF08659 KR domain DNK48_RS01085 PF00698 Acyl transferase domain DNK48_RS01085 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS01090 PF00668 Condensation domain DNK48_RS01090 PF00501 AMP-binding enzyme DNK48_RS01090 PF00550 Phosphopantetheine attachment site DNK48_RS01090 PF00975 Thioesterase domain DNK48_RS01090 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS01140 PF00975 Thioesterase domain DNK48_RS01140 PF00550 Phosphopantetheine attachment site DNK48_RS01140 PF08990 Erythronolide synthase docking DNK48_RS01140 PF00698 Acyl transferase domain DNK48_RS01140 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS01140 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS01140 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS01145 PF02423 Ornithine cyclodeaminase/mu-crystallin family DNK48_RS01155 PF00067 Cytochrome P450 DNK48_RS01160 PF00067 Cytochrome P450 DNK48_RS01175 PF07726 ATPase family associated with various cellular activities (AAA) DNK48_RS01175 PF17863 AAA lid domain DNK48_RS01195 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DNK48_RS01195 PF01266 FAD dependent oxidoreductase DNK48_RS01210 PF08669 Glycine cleavage T-protein C-terminal barrel domain DNK48_RS01210 PF01571 Aminomethyltransferase folate-binding domain DNK48_RS01210 PF16350 FAD dependent oxidoreductase central domain DNK48_RS01210 PF01266 FAD dependent oxidoreductase DNK48_RS01215 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DNK48_RS01215 PF00355 Rieske [2Fe-2S] domain DNK48_RS01220 PF00561 alpha/beta hydrolase fold DNK48_RS01230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS01230 PF00005 ABC transporter DNK48_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS01235 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS01245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS01250 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS01250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS01250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS01255 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS01265 PF02525 Flavodoxin-like fold DNK48_RS01270 PF01425 Amidase DNK48_RS01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS01280 PF05175 Methyltransferase small domain DNK48_RS01280 PF17827 PrmC N-terminal domain DNK48_RS01290 PF00581 Rhodanese-like domain DNK48_RS01300 PF01925 Sulfite exporter TauE/SafE DNK48_RS01310 PF00501 AMP-binding enzyme DNK48_RS01310 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS01320 PF00107 Zinc-binding dehydrogenase DNK48_RS01320 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS01325 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS01340 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS01340 PF16859 Tetracyclin repressor-like, C-terminal domain DNK48_RS01345 PF00171 Aldehyde dehydrogenase family DNK48_RS01355 PF00795 Carbon-nitrogen hydrolase DNK48_RS01360 PF02311 AraC-like ligand binding domain DNK48_RS01360 PF12833 Helix-turn-helix domain DNK48_RS01365 PF00107 Zinc-binding dehydrogenase DNK48_RS01365 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS01380 PF13847 Methyltransferase domain DNK48_RS01400 PF00293 NUDIX domain DNK48_RS01400 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS01415 PF08402 TOBE domain DNK48_RS01415 PF00005 ABC transporter DNK48_RS01435 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS01435 PF07702 UTRA domain DNK48_RS01445 PF05506 Domain of unknown function (DUF756) DNK48_RS01445 PF04185 Phosphoesterase family DNK48_RS01450 PF04185 Phosphoesterase family DNK48_RS01450 PF05506 Domain of unknown function (DUF756) DNK48_RS01460 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS01470 PF01547 Bacterial extracellular solute-binding protein DNK48_RS01475 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS01480 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS01485 PF00657 GDSL-like Lipase/Acylhydrolase DNK48_RS01485 PF00404 Dockerin type I domain DNK48_RS01500 PF01425 Amidase DNK48_RS01520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS01520 PF03466 LysR substrate binding domain DNK48_RS01525 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS01530 PF00005 ABC transporter DNK48_RS01555 PF01494 FAD binding domain DNK48_RS01570 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS01570 PF00501 AMP-binding enzyme DNK48_RS01575 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS01575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS01580 PF01613 Flavin reductase like domain DNK48_RS01600 PF00106 short chain dehydrogenase DNK48_RS01605 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS01615 PF09339 IclR helix-turn-helix domain DNK48_RS01615 PF01614 Bacterial transcriptional regulator DNK48_RS01625 PF00491 Arginase family DNK48_RS01630 PF00474 Sodium:solute symporter family DNK48_RS01665 PF00891 O-methyltransferase domain DNK48_RS01680 PF00698 Acyl transferase domain DNK48_RS01680 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS01680 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS01680 PF08659 KR domain DNK48_RS01680 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS01680 PF00550 Phosphopantetheine attachment site DNK48_RS01680 PF14765 Polyketide synthase dehydratase DNK48_RS01685 PF00550 Phosphopantetheine attachment site DNK48_RS01685 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS01685 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS01685 PF14765 Polyketide synthase dehydratase DNK48_RS01685 PF00698 Acyl transferase domain DNK48_RS01685 PF08659 KR domain DNK48_RS01685 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS01690 PF01494 FAD binding domain DNK48_RS01695 PF07731 Multicopper oxidase DNK48_RS01695 PF07732 Multicopper oxidase DNK48_RS01700 PF02585 GlcNAc-PI de-N-acetylase DNK48_RS01725 PF01593 Flavin containing amine oxidoreductase DNK48_RS01730 PF00665 Integrase core domain DNK48_RS01730 PF13936 Helix-turn-helix domain DNK48_RS01765 PF01494 FAD binding domain DNK48_RS01795 PF01965 DJ-1/PfpI family DNK48_RS01810 PF01979 Amidohydrolase family DNK48_RS01815 PF01266 FAD dependent oxidoreductase DNK48_RS01820 PF07859 alpha/beta hydrolase fold DNK48_RS01825 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS01830 PF00005 ABC transporter DNK48_RS01845 PF13581 Histidine kinase-like ATPase domain DNK48_RS01845 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS01845 PF08448 PAS fold DNK48_RS01845 PF13466 STAS domain DNK48_RS01860 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS01865 PF01406 tRNA synthetases class I (C) catalytic domain DNK48_RS01870 PF00719 Inorganic pyrophosphatase DNK48_RS01875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DNK48_RS01880 PF02641 Uncharacterized ACR, COG1993 DNK48_RS01885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DNK48_RS01890 PF12833 Helix-turn-helix domain DNK48_RS01890 PF06719 AraC-type transcriptional regulator N-terminus DNK48_RS01895 PF00248 Aldo/keto reductase family DNK48_RS01900 PF04055 Radical SAM superfamily DNK48_RS01905 PF02901 Pyruvate formate lyase-like DNK48_RS01905 PF01228 Glycine radical DNK48_RS01910 PF00582 Universal stress protein family DNK48_RS01920 PF00582 Universal stress protein family DNK48_RS01940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DNK48_RS01960 PF00005 ABC transporter DNK48_RS01970 PF01297 Zinc-uptake complex component A periplasmic DNK48_RS01980 PF00005 ABC transporter DNK48_RS01985 PF01032 FecCD transport family DNK48_RS01990 PF01795 MraW methylase family DNK48_RS02000 PF02278 Polysaccharide lyase family 8, super-sandwich domain DNK48_RS02000 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DNK48_RS02000 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain DNK48_RS02005 PF04041 beta-1,4-mannooligosaccharide phosphorylase DNK48_RS02010 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02015 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02020 PF01547 Bacterial extracellular solute-binding protein DNK48_RS02025 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS02030 PF08291 Peptidase M15 DNK48_RS02030 PF01471 Putative peptidoglycan binding domain DNK48_RS02035 PF00282 Pyridoxal-dependent decarboxylase conserved domain DNK48_RS02040 PF01037 Lrp/AsnC ligand binding domain DNK48_RS02055 PF00171 Aldehyde dehydrogenase family DNK48_RS02060 PF00067 Cytochrome P450 DNK48_RS02065 PF00106 short chain dehydrogenase DNK48_RS02080 PF00248 Aldo/keto reductase family DNK48_RS02090 PF00296 Luciferase-like monooxygenase DNK48_RS02095 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02100 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02125 PF00106 short chain dehydrogenase DNK48_RS02130 PF04978 Protein of unknown function (DUF664) DNK48_RS02175 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS02175 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS02180 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS02180 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS02185 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS02185 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS02190 PF07977 FabA-like domain DNK48_RS02195 PF07977 FabA-like domain DNK48_RS02205 PF02423 Ornithine cyclodeaminase/mu-crystallin family DNK48_RS02210 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS02220 PF00550 Phosphopantetheine attachment site DNK48_RS02225 PF03621 MbtH-like protein DNK48_RS02235 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS02235 PF00550 Phosphopantetheine attachment site DNK48_RS02235 PF00550 Phosphopantetheine attachment site DNK48_RS02235 PF00668 Condensation domain DNK48_RS02235 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS02235 PF00501 AMP-binding enzyme DNK48_RS02235 PF00668 Condensation domain DNK48_RS02235 PF00501 AMP-binding enzyme DNK48_RS02245 PF00005 ABC transporter DNK48_RS02245 PF13732 Domain of unknown function (DUF4162) DNK48_RS02250 PF00067 Cytochrome P450 DNK48_RS02270 PF10503 Esterase PHB depolymerase DNK48_RS02275 PF00067 Cytochrome P450 DNK48_RS02290 PF07687 Peptidase dimerisation domain DNK48_RS02290 PF01546 Peptidase family M20/M25/M40 DNK48_RS02295 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS02300 PF03437 BtpA family DNK48_RS02315 PF00005 ABC transporter DNK48_RS02320 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS02345 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS02345 PF07729 FCD domain DNK48_RS02355 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02360 PF00005 ABC transporter DNK48_RS02370 PF01053 Cys/Met metabolism PLP-dependent enzyme DNK48_RS02375 PF13649 Methyltransferase domain DNK48_RS02380 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS02380 PF07729 FCD domain DNK48_RS02385 PF00296 Luciferase-like monooxygenase DNK48_RS02390 PF00581 Rhodanese-like domain DNK48_RS02395 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02405 PF00005 ABC transporter DNK48_RS02410 PF01566 Natural resistance-associated macrophage protein DNK48_RS02425 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS02425 PF17925 Tetracyclin repressor-like, C-terminal domain DNK48_RS02430 PF01494 FAD binding domain DNK48_RS02440 PF01565 FAD binding domain DNK48_RS02440 PF08031 Berberine and berberine like DNK48_RS02445 PF01979 Amidohydrolase family DNK48_RS02460 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS02465 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS02490 PF04343 Protein of unknown function, DUF488 DNK48_RS02500 PF13492 GAF domain DNK48_RS02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS02500 PF07730 Histidine kinase DNK48_RS02500 PF13185 GAF domain DNK48_RS02515 PF00106 short chain dehydrogenase DNK48_RS02520 PF13229 Right handed beta helix region DNK48_RS02540 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS02540 PF00501 AMP-binding enzyme DNK48_RS02545 PF01575 MaoC like domain DNK48_RS02555 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS02555 PF07729 FCD domain DNK48_RS02560 PF01425 Amidase DNK48_RS02565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS02570 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02575 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02575 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS02580 PF00005 ABC transporter DNK48_RS02580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS02585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS02585 PF00005 ABC transporter DNK48_RS02590 PF00171 Aldehyde dehydrogenase family DNK48_RS02610 PF00005 ABC transporter DNK48_RS02620 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02625 PF00171 Aldehyde dehydrogenase family DNK48_RS02630 PF00701 Dihydrodipicolinate synthetase family DNK48_RS02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS02635 PF03466 LysR substrate binding domain DNK48_RS02640 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS02640 PF00072 Response regulator receiver domain DNK48_RS02650 PF00005 ABC transporter DNK48_RS02655 PF00005 ABC transporter DNK48_RS02665 PF00989 PAS fold DNK48_RS02665 PF00672 HAMP domain DNK48_RS02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS02665 PF18698 Histidine kinase sensor domain DNK48_RS02665 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS02680 PF02492 CobW/HypB/UreG, nucleotide-binding domain DNK48_RS02680 PF07683 Cobalamin synthesis protein cobW C-terminal domain DNK48_RS02685 PF01783 Ribosomal L32p protein family DNK48_RS02690 PF03466 LysR substrate binding domain DNK48_RS02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS02695 PF00384 Molybdopterin oxidoreductase DNK48_RS02695 PF01568 Molydopterin dinucleotide binding domain DNK48_RS02705 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS02705 PF07729 FCD domain DNK48_RS02710 PF00296 Luciferase-like monooxygenase DNK48_RS02715 PF01979 Amidohydrolase family DNK48_RS02725 PF01968 Hydantoinase/oxoprolinase DNK48_RS02725 PF05378 Hydantoinase/oxoprolinase N-terminal region DNK48_RS02730 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS02735 PF00005 ABC transporter DNK48_RS02745 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS02755 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02760 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS02770 PF05544 Proline racemase DNK48_RS02775 PF00701 Dihydrodipicolinate synthetase family DNK48_RS02780 PF04324 BFD-like [2Fe-2S] binding domain DNK48_RS02780 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS02790 PF01266 FAD dependent oxidoreductase DNK48_RS02800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS02800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS02805 PF07702 UTRA domain DNK48_RS02805 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS02810 PF02515 CoA-transferase family III DNK48_RS02815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS02815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS02815 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS02825 PF00083 Sugar (and other) transporter DNK48_RS02825 PF07690 Major Facilitator Superfamily DNK48_RS02835 PF00374 Nickel-dependent hydrogenase DNK48_RS02835 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DNK48_RS02835 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DNK48_RS02840 PF00361 Proton-conducting membrane transporter DNK48_RS02840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DNK48_RS02850 PF00146 NADH dehydrogenase DNK48_RS02855 PF00361 Proton-conducting membrane transporter DNK48_RS02860 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DNK48_RS02870 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS02890 PF12680 SnoaL-like domain DNK48_RS02890 PF08281 Sigma-70, region 4 DNK48_RS02890 PF04542 Sigma-70 region 2 DNK48_RS02900 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS02910 PF08546 Ketopantoate reductase PanE/ApbA C terminal DNK48_RS02910 PF02558 Ketopantoate reductase PanE/ApbA DNK48_RS02915 PF07690 Major Facilitator Superfamily DNK48_RS02920 PF01638 HxlR-like helix-turn-helix DNK48_RS02925 PF00106 short chain dehydrogenase DNK48_RS02935 PF04542 Sigma-70 region 2 DNK48_RS02935 PF08281 Sigma-70, region 4 DNK48_RS02945 PF00005 ABC transporter DNK48_RS02960 PF00583 Acetyltransferase (GNAT) family DNK48_RS02965 PF04476 4-HFC-P synthase DNK48_RS02970 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS02970 PF00107 Zinc-binding dehydrogenase DNK48_RS02975 PF04072 Leucine carboxyl methyltransferase DNK48_RS02985 PF08531 Alpha-L-rhamnosidase N-terminal domain DNK48_RS02985 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain DNK48_RS02985 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DNK48_RS02985 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain DNK48_RS03000 PF00296 Luciferase-like monooxygenase DNK48_RS03005 PF09084 NMT1/THI5 like DNK48_RS03015 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS03020 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS03020 PF07729 FCD domain DNK48_RS03025 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS03030 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS03040 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS03050 PF03466 LysR substrate binding domain DNK48_RS03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS03055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNK48_RS03055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DNK48_RS03060 PF03737 Aldolase/RraA DNK48_RS03065 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS03065 PF00107 Zinc-binding dehydrogenase DNK48_RS03090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS03090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS03090 PF01842 ACT domain DNK48_RS03095 PF00248 Aldo/keto reductase family DNK48_RS03105 PF00083 Sugar (and other) transporter DNK48_RS03105 PF08946 Osmosensory transporter coiled coil DNK48_RS03110 PF00155 Aminotransferase class I and II DNK48_RS03120 PF02682 Carboxyltransferase domain, subdomain C and D DNK48_RS03125 PF03746 LamB/YcsF family DNK48_RS03135 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS03135 PF00107 Zinc-binding dehydrogenase DNK48_RS03140 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS03185 PF00107 Zinc-binding dehydrogenase DNK48_RS03185 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS03195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS03205 PF13340 Putative transposase of IS4/5 family (DUF4096) DNK48_RS03245 PF02361 Cobalt transport protein DNK48_RS03250 PF00005 ABC transporter DNK48_RS03255 PF01323 DSBA-like thioredoxin domain DNK48_RS03260 PF01323 DSBA-like thioredoxin domain DNK48_RS03270 PF01047 MarR family DNK48_RS03275 PF07730 Histidine kinase DNK48_RS03280 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS03280 PF00072 Response regulator receiver domain DNK48_RS03285 PF01613 Flavin reductase like domain DNK48_RS03300 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS03300 PF00672 HAMP domain DNK48_RS03310 PF00005 ABC transporter DNK48_RS03315 PF03176 MMPL family DNK48_RS03330 PF00171 Aldehyde dehydrogenase family DNK48_RS03335 PF00171 Aldehyde dehydrogenase family DNK48_RS03340 PF01791 DeoC/LacD family aldolase DNK48_RS03345 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS03350 PF00005 ABC transporter DNK48_RS03360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS03360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS03365 PF00107 Zinc-binding dehydrogenase DNK48_RS03365 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS03370 PF13407 Periplasmic binding protein domain DNK48_RS03390 PF07859 alpha/beta hydrolase fold DNK48_RS03400 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS03415 PF00106 short chain dehydrogenase DNK48_RS03420 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS03420 PF17926 Tetracyclin repressor-like, C-terminal domain DNK48_RS03425 PF01425 Amidase DNK48_RS03435 PF07690 Major Facilitator Superfamily DNK48_RS03440 PF00067 Cytochrome P450 DNK48_RS03455 PF00582 Universal stress protein family DNK48_RS03460 PF00582 Universal stress protein family DNK48_RS03465 PF08220 DeoR-like helix-turn-helix domain DNK48_RS03465 PF00455 DeoR C terminal sensor domain DNK48_RS03470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DNK48_RS03485 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS03490 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS03490 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS03495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS03495 PF00005 ABC transporter DNK48_RS03500 PF00005 ABC transporter DNK48_RS03500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS03505 PF03328 HpcH/HpaI aldolase/citrate lyase family DNK48_RS03510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS03510 PF01842 ACT domain DNK48_RS03510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS03515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS03515 PF13378 Enolase C-terminal domain-like DNK48_RS03525 PF02515 CoA-transferase family III DNK48_RS03535 PF07730 Histidine kinase DNK48_RS03535 PF13185 GAF domain DNK48_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS03540 PF07690 Major Facilitator Superfamily DNK48_RS03555 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS03560 PF00384 Molybdopterin oxidoreductase DNK48_RS03560 PF01568 Molydopterin dinucleotide binding domain DNK48_RS03565 PF13247 4Fe-4S dicluster domain DNK48_RS03565 PF14711 Respiratory nitrate reductase beta C-terminal DNK48_RS03570 PF02613 Nitrate reductase delta subunit DNK48_RS03575 PF02613 Nitrate reductase delta subunit DNK48_RS03575 PF02665 Nitrate reductase gamma subunit DNK48_RS03575 PF00384 Molybdopterin oxidoreductase DNK48_RS03585 PF00042 Globin DNK48_RS03585 PF00175 Oxidoreductase NAD-binding domain DNK48_RS03585 PF00970 Oxidoreductase FAD-binding domain DNK48_RS03590 PF00072 Response regulator receiver domain DNK48_RS03590 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS03595 PF12900 Pyridoxamine 5'-phosphate oxidase DNK48_RS03610 PF07969 Amidohydrolase family DNK48_RS03615 PF03621 MbtH-like protein DNK48_RS03620 PF11806 Domain of unknown function (DUF3327) DNK48_RS03620 PF00756 Putative esterase DNK48_RS03625 PF00664 ABC transporter transmembrane region DNK48_RS03625 PF00005 ABC transporter DNK48_RS03630 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS03630 PF00668 Condensation domain DNK48_RS03630 PF07993 Male sterility protein DNK48_RS03630 PF00501 AMP-binding enzyme DNK48_RS03630 PF00550 Phosphopantetheine attachment site DNK48_RS03635 PF00005 ABC transporter DNK48_RS03635 PF00664 ABC transporter transmembrane region DNK48_RS03640 PF01497 Periplasmic binding protein DNK48_RS03645 PF00005 ABC transporter DNK48_RS03650 PF01032 FecCD transport family DNK48_RS03655 PF01032 FecCD transport family DNK48_RS03660 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DNK48_RS03665 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS03665 PF00551 Formyl transferase DNK48_RS03665 PF02911 Formyl transferase, C-terminal domain DNK48_RS03670 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS03670 PF14759 Reductase C-terminal DNK48_RS03675 PF04909 Amidohydrolase DNK48_RS03680 PF03737 Aldolase/RraA DNK48_RS03685 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS03685 PF00107 Zinc-binding dehydrogenase DNK48_RS03695 PF02502 Ribose/Galactose Isomerase DNK48_RS03705 PF02548 Ketopantoate hydroxymethyltransferase DNK48_RS03715 PF00355 Rieske [2Fe-2S] domain DNK48_RS03720 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS03725 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS03735 PF06277 Ethanolamine utilisation protein EutA DNK48_RS03745 PF01547 Bacterial extracellular solute-binding protein DNK48_RS03750 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS03755 PF08402 TOBE domain DNK48_RS03755 PF00005 ABC transporter DNK48_RS03770 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS03770 PF17862 AAA+ lid domain DNK48_RS03770 PF01434 Peptidase family M41 DNK48_RS03780 PF07729 FCD domain DNK48_RS03780 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS03790 PF09084 NMT1/THI5 like DNK48_RS03795 PF00596 Class II Aldolase and Adducin N-terminal domain DNK48_RS03800 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS03800 PF00107 Zinc-binding dehydrogenase DNK48_RS03810 PF04237 YjbR DNK48_RS03825 PF00248 Aldo/keto reductase family DNK48_RS03830 PF00107 Zinc-binding dehydrogenase DNK48_RS03830 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS03840 PF00106 short chain dehydrogenase DNK48_RS03850 PF08386 TAP-like protein DNK48_RS03850 PF00561 alpha/beta hydrolase fold DNK48_RS03860 PF13302 Acetyltransferase (GNAT) domain DNK48_RS03865 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS03875 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS03875 PF00072 Response regulator receiver domain DNK48_RS03880 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS03885 PF00288 GHMP kinases N terminal domain DNK48_RS03890 PF14698 Argininosuccinate lyase C-terminal DNK48_RS03890 PF00206 Lyase DNK48_RS03895 PF00550 Phosphopantetheine attachment site DNK48_RS03895 PF00668 Condensation domain DNK48_RS03895 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS03895 PF00501 AMP-binding enzyme DNK48_RS03905 PF00975 Thioesterase domain DNK48_RS03915 PF00891 O-methyltransferase domain DNK48_RS03920 PF00685 Sulfotransferase domain DNK48_RS03925 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DNK48_RS03930 PF00067 Cytochrome P450 DNK48_RS03935 PF04820 Tryptophan halogenase DNK48_RS03940 PF00668 Condensation domain DNK48_RS03940 PF00550 Phosphopantetheine attachment site DNK48_RS03940 PF00501 AMP-binding enzyme DNK48_RS03940 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS03945 PF00501 AMP-binding enzyme DNK48_RS03945 PF00975 Thioesterase domain DNK48_RS03945 PF00550 Phosphopantetheine attachment site DNK48_RS03945 PF00668 Condensation domain DNK48_RS03945 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS03955 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS03960 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DNK48_RS03960 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNK48_RS03965 PF00682 HMGL-like DNK48_RS03965 PF07836 DmpG-like communication domain DNK48_RS03980 PF00155 Aminotransferase class I and II DNK48_RS03985 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS03995 PF00550 Phosphopantetheine attachment site DNK48_RS03995 PF00698 Acyl transferase domain DNK48_RS03995 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS03995 PF08990 Erythronolide synthase docking DNK48_RS03995 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS03995 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS03995 PF08659 KR domain DNK48_RS04030 PF14765 Polyketide synthase dehydratase DNK48_RS04030 PF00550 Phosphopantetheine attachment site DNK48_RS04030 PF08659 KR domain DNK48_RS04030 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS04030 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS04030 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS04030 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS04030 PF00698 Acyl transferase domain DNK48_RS04035 PF08990 Erythronolide synthase docking DNK48_RS04035 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS04035 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS04035 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS04035 PF00698 Acyl transferase domain DNK48_RS04035 PF08659 KR domain DNK48_RS04035 PF14765 Polyketide synthase dehydratase DNK48_RS04035 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS04035 PF00550 Phosphopantetheine attachment site DNK48_RS04040 PF14765 Polyketide synthase dehydratase DNK48_RS04040 PF00550 Phosphopantetheine attachment site DNK48_RS04040 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS04040 PF00698 Acyl transferase domain DNK48_RS04040 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS04040 PF08659 KR domain DNK48_RS04040 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS04050 PF00067 Cytochrome P450 DNK48_RS04055 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS04055 PF00072 Response regulator receiver domain DNK48_RS04065 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS04075 PF00195 Chalcone and stilbene synthases, N-terminal domain DNK48_RS04075 PF02797 Chalcone and stilbene synthases, C-terminal domain DNK48_RS04080 PF13977 BetI-type transcriptional repressor, C-terminal DNK48_RS04080 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS04085 PF03621 MbtH-like protein DNK48_RS04090 PF16884 N-terminal domain of oxidoreductase DNK48_RS04090 PF00107 Zinc-binding dehydrogenase DNK48_RS04105 PF01638 HxlR-like helix-turn-helix DNK48_RS04120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS04125 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS04135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS04135 PF00005 ABC transporter DNK48_RS04140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS04140 PF00005 ABC transporter DNK48_RS04145 PF00480 ROK family DNK48_RS04150 PF02633 Creatinine amidohydrolase DNK48_RS04155 PF13378 Enolase C-terminal domain-like DNK48_RS04155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS04165 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS04165 PF00698 Acyl transferase domain DNK48_RS04165 PF08659 KR domain DNK48_RS04165 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS04165 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS04165 PF14765 Polyketide synthase dehydratase DNK48_RS04165 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS04165 PF00550 Phosphopantetheine attachment site DNK48_RS04170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS04170 PF03466 LysR substrate binding domain DNK48_RS04175 PF03648 Glycosyl hydrolase family 67 N-terminus DNK48_RS04175 PF07488 Glycosyl hydrolase family 67 middle domain DNK48_RS04175 PF07477 Glycosyl hydrolase family 67 C-terminus DNK48_RS04185 PF00999 Sodium/hydrogen exchanger family DNK48_RS04215 PF13199 Glycosyl hydrolase family 66 DNK48_RS04215 PF16990 Carbohydrate binding module (family 35) DNK48_RS04215 PF03422 Carbohydrate binding module (family 6) DNK48_RS04220 PF02909 Tetracyclin repressor-like, C-terminal domain DNK48_RS04220 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS04235 PF00753 Metallo-beta-lactamase superfamily DNK48_RS04240 PF00474 Sodium:solute symporter family DNK48_RS04250 PF00561 alpha/beta hydrolase fold DNK48_RS04260 PF07690 Major Facilitator Superfamily DNK48_RS04265 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS04280 PF08361 MAATS-type transcriptional repressor, C-terminal region DNK48_RS04280 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS04290 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DNK48_RS04300 PF18089 DAPG hydrolase PhiG domain DNK48_RS04310 PF13466 STAS domain DNK48_RS04310 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS04310 PF08448 PAS fold DNK48_RS04310 PF13581 Histidine kinase-like ATPase domain DNK48_RS04325 PF01032 FecCD transport family DNK48_RS04330 PF00005 ABC transporter DNK48_RS04335 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS04335 PF00072 Response regulator receiver domain DNK48_RS04340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS04345 PF00202 Aminotransferase class-III DNK48_RS04350 PF13840 ACT domain DNK48_RS04350 PF00696 Amino acid kinase family DNK48_RS04350 PF01842 ACT domain DNK48_RS04355 PF17754 MftR C-terminal domain DNK48_RS04355 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS04360 PF01494 FAD binding domain DNK48_RS04365 PF03061 Thioesterase superfamily DNK48_RS04370 PF01425 Amidase DNK48_RS04390 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DNK48_RS04390 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DNK48_RS04400 PF13520 Amino acid permease DNK48_RS04410 PF01266 FAD dependent oxidoreductase DNK48_RS04410 PF08669 Glycine cleavage T-protein C-terminal barrel domain DNK48_RS04410 PF16350 FAD dependent oxidoreductase central domain DNK48_RS04410 PF01571 Aminomethyltransferase folate-binding domain DNK48_RS04415 PF07063 Domain of unknown function (DUF1338) DNK48_RS04420 PF00171 Aldehyde dehydrogenase family DNK48_RS04470 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS04480 PF01061 ABC-2 type transporter DNK48_RS04485 PF00005 ABC transporter DNK48_RS04485 PF13732 Domain of unknown function (DUF4162) DNK48_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS04505 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DNK48_RS04505 PF01266 FAD dependent oxidoreductase DNK48_RS04520 PF16499 Alpha galactosidase A DNK48_RS04520 PF17801 Alpha galactosidase C-terminal beta sandwich domain DNK48_RS04525 PF00480 ROK family DNK48_RS04530 PF16875 Glycosyl hydrolase family 36 N-terminal domain DNK48_RS04530 PF16874 Glycosyl hydrolase family 36 C-terminal domain DNK48_RS04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS04535 PF03466 LysR substrate binding domain DNK48_RS04540 PF00501 AMP-binding enzyme DNK48_RS04540 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS04545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS04545 PF13378 Enolase C-terminal domain-like DNK48_RS04555 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS04560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS04560 PF16582 Middle domain of thiamine pyrophosphate DNK48_RS04560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS04570 PF00425 chorismate binding enzyme DNK48_RS04575 PF03364 Polyketide cyclase / dehydrase and lipid transport DNK48_RS04580 PF00384 Molybdopterin oxidoreductase DNK48_RS04580 PF01568 Molydopterin dinucleotide binding domain DNK48_RS04585 PF00491 Arginase family DNK48_RS04595 PF08335 GlnD PII-uridylyltransferase DNK48_RS04595 PF03445 Putative nucleotidyltransferase DUF294 DNK48_RS04595 PF01966 HD domain DNK48_RS04600 PF01965 DJ-1/PfpI family DNK48_RS04605 PF00083 Sugar (and other) transporter DNK48_RS04610 PF00171 Aldehyde dehydrogenase family DNK48_RS04620 PF08714 Formaldehyde-activating enzyme (Fae) DNK48_RS04625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS04625 PF13378 Enolase C-terminal domain-like DNK48_RS04630 PF00171 Aldehyde dehydrogenase family DNK48_RS04635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNK48_RS04635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DNK48_RS04640 PF00465 Iron-containing alcohol dehydrogenase DNK48_RS04650 PF07730 Histidine kinase DNK48_RS04650 PF13492 GAF domain DNK48_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS04655 PF04072 Leucine carboxyl methyltransferase DNK48_RS04660 PF01979 Amidohydrolase family DNK48_RS04660 PF13382 Adenine deaminase C-terminal domain DNK48_RS04670 PF03756 A-factor biosynthesis hotdog domain DNK48_RS04680 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DNK48_RS04695 PF00501 AMP-binding enzyme DNK48_RS04700 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DNK48_RS04700 PF00391 PEP-utilising enzyme, mobile domain DNK48_RS04705 PF00067 Cytochrome P450 DNK48_RS04720 PF00892 EamA-like transporter family DNK48_RS04730 PF00890 FAD binding domain DNK48_RS04750 PF02811 PHP domain DNK48_RS04750 PF14716 Helix-hairpin-helix domain DNK48_RS04750 PF14791 DNA polymerase beta thumb DNK48_RS04755 PF03636 Glycosyl hydrolase family 65, N-terminal domain DNK48_RS04755 PF03632 Glycosyl hydrolase family 65 central catalytic domain DNK48_RS04755 PF03633 Glycosyl hydrolase family 65, C-terminal domain DNK48_RS04760 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS04765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS04765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS04775 PF01047 MarR family DNK48_RS04780 PF07690 Major Facilitator Superfamily DNK48_RS04795 PF00795 Carbon-nitrogen hydrolase DNK48_RS04800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS04800 PF13378 Enolase C-terminal domain-like DNK48_RS04805 PF00248 Aldo/keto reductase family DNK48_RS04820 PF02492 CobW/HypB/UreG, nucleotide-binding domain DNK48_RS04820 PF07683 Cobalamin synthesis protein cobW C-terminal domain DNK48_RS04825 PF00248 Aldo/keto reductase family DNK48_RS04845 PF07944 Beta-L-arabinofuranosidase, GH127 DNK48_RS04855 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS04860 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS04865 PF00005 ABC transporter DNK48_RS04875 PF09335 SNARE associated Golgi protein DNK48_RS04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS04880 PF07730 Histidine kinase DNK48_RS04885 PF00072 Response regulator receiver domain DNK48_RS04885 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS04890 PF02423 Ornithine cyclodeaminase/mu-crystallin family DNK48_RS04895 PF03176 MMPL family DNK48_RS04900 PF12697 Alpha/beta hydrolase family DNK48_RS04905 PF03621 MbtH-like protein DNK48_RS04910 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS04910 PF00550 Phosphopantetheine attachment site DNK48_RS04910 PF00501 AMP-binding enzyme DNK48_RS04910 PF00975 Thioesterase domain DNK48_RS04910 PF00668 Condensation domain DNK48_RS04915 PF00668 Condensation domain DNK48_RS04915 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS04915 PF00975 Thioesterase domain DNK48_RS04915 PF00501 AMP-binding enzyme DNK48_RS04915 PF00550 Phosphopantetheine attachment site DNK48_RS04920 PF00501 AMP-binding enzyme DNK48_RS04920 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS04920 PF00668 Condensation domain DNK48_RS04920 PF00550 Phosphopantetheine attachment site DNK48_RS04920 PF00975 Thioesterase domain DNK48_RS04925 PF00975 Thioesterase domain DNK48_RS04925 PF00501 AMP-binding enzyme DNK48_RS04925 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS04925 PF00550 Phosphopantetheine attachment site DNK48_RS04925 PF00668 Condensation domain DNK48_RS04945 PF00501 AMP-binding enzyme DNK48_RS04960 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS04960 PF00501 AMP-binding enzyme DNK48_RS04960 PF00550 Phosphopantetheine attachment site DNK48_RS04960 PF00668 Condensation domain DNK48_RS04965 PF02655 ATP-grasp domain DNK48_RS04965 PF00206 Lyase DNK48_RS04970 PF02655 ATP-grasp domain DNK48_RS04970 PF00206 Lyase DNK48_RS04975 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS04980 PF13732 Domain of unknown function (DUF4162) DNK48_RS04980 PF00005 ABC transporter DNK48_RS05010 PF01810 LysE type translocator DNK48_RS05030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS05030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS05035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DNK48_RS05035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DNK48_RS05045 PF00733 Asparagine synthase DNK48_RS05045 PF13537 Glutamine amidotransferase domain DNK48_RS05060 PF00175 Oxidoreductase NAD-binding domain DNK48_RS05060 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS05065 PF08021 Siderophore-interacting FAD-binding domain DNK48_RS05065 PF04954 Siderophore-interacting protein DNK48_RS05070 PF01965 DJ-1/PfpI family DNK48_RS05080 PF00106 short chain dehydrogenase DNK48_RS05090 PF00294 pfkB family carbohydrate kinase DNK48_RS05100 PF03747 ADP-ribosylglycohydrolase DNK48_RS05105 PF07702 UTRA domain DNK48_RS05105 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS05110 PF12697 Alpha/beta hydrolase family DNK48_RS05120 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS05125 PF01638 HxlR-like helix-turn-helix DNK48_RS05135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS05135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS05145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS05150 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS05155 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS05155 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS05160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS05160 PF00005 ABC transporter DNK48_RS05165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS05165 PF00005 ABC transporter DNK48_RS05180 PF01965 DJ-1/PfpI family DNK48_RS05185 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS05200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS05200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS05205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS05205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS05215 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNK48_RS05215 PF01799 [2Fe-2S] binding domain DNK48_RS05215 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS05220 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS05220 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS05225 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS05225 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS05245 PF06445 GyrI-like small molecule binding domain DNK48_RS05245 PF12833 Helix-turn-helix domain DNK48_RS05250 PF00324 Amino acid permease DNK48_RS05255 PF00795 Carbon-nitrogen hydrolase DNK48_RS05265 PF00106 short chain dehydrogenase DNK48_RS05270 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS05270 PF13977 BetI-type transcriptional repressor, C-terminal DNK48_RS05275 PF04143 Sulphur transport DNK48_RS05295 PF01638 HxlR-like helix-turn-helix DNK48_RS05310 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS05310 PF00501 AMP-binding enzyme DNK48_RS05315 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS05315 PF14765 Polyketide synthase dehydratase DNK48_RS05315 PF00550 Phosphopantetheine attachment site DNK48_RS05315 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS05315 PF08659 KR domain DNK48_RS05315 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS05315 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS05315 PF00698 Acyl transferase domain DNK48_RS05330 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS05330 PF00550 Phosphopantetheine attachment site DNK48_RS05330 PF08659 KR domain DNK48_RS05330 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS05330 PF00698 Acyl transferase domain DNK48_RS05330 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS05330 PF14765 Polyketide synthase dehydratase DNK48_RS05335 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS05335 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS05335 PF00975 Thioesterase domain DNK48_RS05335 PF00550 Phosphopantetheine attachment site DNK48_RS05335 PF00698 Acyl transferase domain DNK48_RS05335 PF08990 Erythronolide synthase docking DNK48_RS05335 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS05335 PF08659 KR domain DNK48_RS05335 PF18369 Polyketide synthase dimerisation element domain DNK48_RS05345 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS05345 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS05345 PF14765 Polyketide synthase dehydratase DNK48_RS05345 PF00550 Phosphopantetheine attachment site DNK48_RS05345 PF00698 Acyl transferase domain DNK48_RS05345 PF08659 KR domain DNK48_RS05345 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS05350 PF00550 Phosphopantetheine attachment site DNK48_RS05350 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS05350 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS05350 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS05350 PF00698 Acyl transferase domain DNK48_RS05350 PF14765 Polyketide synthase dehydratase DNK48_RS05350 PF08659 KR domain DNK48_RS05350 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS05355 PF00550 Phosphopantetheine attachment site DNK48_RS05355 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS05355 PF00698 Acyl transferase domain DNK48_RS05355 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS05355 PF08659 KR domain DNK48_RS05355 PF14765 Polyketide synthase dehydratase DNK48_RS05355 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS05365 PF00067 Cytochrome P450 DNK48_RS05475 PF04984 Phage tail sheath protein subtilisin-like domain DNK48_RS05475 PF17482 Phage tail sheath C-terminal domain DNK48_RS05495 PF03704 Bacterial transcriptional activator domain DNK48_RS05495 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS05500 PF00664 ABC transporter transmembrane region DNK48_RS05500 PF00005 ABC transporter DNK48_RS05515 PF00664 ABC transporter transmembrane region DNK48_RS05515 PF00005 ABC transporter DNK48_RS05520 PF00005 ABC transporter DNK48_RS05520 PF00664 ABC transporter transmembrane region DNK48_RS05530 PF00271 Helicase conserved C-terminal domain DNK48_RS05530 PF08148 DSHCT (NUC185) domain DNK48_RS05530 PF00270 DEAD/DEAH box helicase DNK48_RS05545 PF03259 Roadblock/LC7 domain DNK48_RS05555 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS05555 PF00107 Zinc-binding dehydrogenase DNK48_RS05555 PF13823 Alcohol dehydrogenase GroES-associated DNK48_RS05565 PF08241 Methyltransferase domain DNK48_RS05585 PF12419 SNF2 Helicase protein DNK48_RS05585 PF00271 Helicase conserved C-terminal domain DNK48_RS05585 PF00176 SNF2 family N-terminal domain DNK48_RS05595 PF01095 Pectinesterase DNK48_RS05600 PF01261 Xylose isomerase-like TIM barrel DNK48_RS05605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS05605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS05610 PF00480 ROK family DNK48_RS05640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS05640 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS05640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS05645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS05645 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS05645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS05650 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS05650 PF00107 Zinc-binding dehydrogenase DNK48_RS05660 PF12867 DinB superfamily DNK48_RS05660 PF03781 Sulfatase-modifying factor enzyme 1 DNK48_RS05670 PF10017 Histidine-specific methyltransferase, SAM-dependent DNK48_RS05675 PF01476 LysM domain DNK48_RS05675 PF06737 Transglycosylase-like domain DNK48_RS05680 PF00890 FAD binding domain DNK48_RS05685 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS05685 PF07702 UTRA domain DNK48_RS05690 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS05690 PF17754 MftR C-terminal domain DNK48_RS05710 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DNK48_RS05710 PF00175 Oxidoreductase NAD-binding domain DNK48_RS05730 PF07503 HypF finger DNK48_RS05730 PF01300 Telomere recombination DNK48_RS05730 PF17788 HypF Kae1-like domain DNK48_RS05730 PF00708 Acylphosphatase DNK48_RS05735 PF01455 HupF/HypC family DNK48_RS05740 PF01924 Hydrogenase formation hypA family DNK48_RS05745 PF00586 AIR synthase related protein, N-terminal domain DNK48_RS05745 PF02769 AIR synthase related protein, C-terminal domain DNK48_RS05750 PF00571 CBS domain DNK48_RS05750 PF00478 IMP dehydrogenase / GMP reductase domain DNK48_RS05755 PF03976 Polyphosphate kinase 2 (PPK2) DNK48_RS05760 PF00582 Universal stress protein family DNK48_RS05765 PF00690 Cation transporter/ATPase, N-terminus DNK48_RS05765 PF00689 Cation transporting ATPase, C-terminus DNK48_RS05780 PF00970 Oxidoreductase FAD-binding domain DNK48_RS05780 PF00042 Globin DNK48_RS05780 PF00175 Oxidoreductase NAD-binding domain DNK48_RS05785 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS05785 PF00072 Response regulator receiver domain DNK48_RS05790 PF00672 HAMP domain DNK48_RS05790 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS05800 PF00403 Heavy-metal-associated domain DNK48_RS05810 PF08281 Sigma-70, region 4 DNK48_RS05810 PF04542 Sigma-70 region 2 DNK48_RS05835 PF00144 Beta-lactamase DNK48_RS05850 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS05855 PF01144 Coenzyme A transferase DNK48_RS05865 PF03060 Nitronate monooxygenase DNK48_RS05870 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DNK48_RS05870 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS05880 PF17203 Single cache domain 3 DNK48_RS05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS05880 PF00989 PAS fold DNK48_RS05880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS05885 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS05885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNK48_RS05895 PF04324 BFD-like [2Fe-2S] binding domain DNK48_RS05895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS05900 PF04324 BFD-like [2Fe-2S] binding domain DNK48_RS05900 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS05905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS05905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS05915 PF13520 Amino acid permease DNK48_RS05920 PF01494 FAD binding domain DNK48_RS05930 PF00188 Cysteine-rich secretory protein family DNK48_RS05935 PF00171 Aldehyde dehydrogenase family DNK48_RS05940 PF00202 Aminotransferase class-III DNK48_RS05965 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS05985 PF00155 Aminotransferase class I and II DNK48_RS06020 PF06737 Transglycosylase-like domain DNK48_RS06030 PF00384 Molybdopterin oxidoreductase DNK48_RS06030 PF01568 Molydopterin dinucleotide binding domain DNK48_RS06030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNK48_RS06035 PF13247 4Fe-4S dicluster domain DNK48_RS06035 PF12800 4Fe-4S binding domain DNK48_RS06055 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS06055 PF00072 Response regulator receiver domain DNK48_RS06070 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS06080 PF09278 MerR, DNA binding DNK48_RS06080 PF00376 MerR family regulatory protein DNK48_RS06180 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS06180 PF07729 FCD domain DNK48_RS06185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS06185 PF13378 Enolase C-terminal domain-like DNK48_RS06190 PF01232 Mannitol dehydrogenase Rossmann domain DNK48_RS06190 PF08125 Mannitol dehydrogenase C-terminal domain DNK48_RS06195 PF07690 Major Facilitator Superfamily DNK48_RS06200 PF00107 Zinc-binding dehydrogenase DNK48_RS06200 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS06225 PF07690 Major Facilitator Superfamily DNK48_RS06250 PF00005 ABC transporter DNK48_RS06255 PF07690 Major Facilitator Superfamily DNK48_RS06260 PF18665 Tetracyclin repressor-like, C-terminal domain DNK48_RS06260 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS06265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNK48_RS06265 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DNK48_RS06270 PF05977 Transmembrane secretion effector DNK48_RS06280 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS06280 PF01799 [2Fe-2S] binding domain DNK48_RS06290 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS06290 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS06300 PF01183 Glycosyl hydrolases family 25 DNK48_RS06320 PF01494 FAD binding domain DNK48_RS06330 PF00005 ABC transporter DNK48_RS06335 PF13519 von Willebrand factor type A domain DNK48_RS06380 PF03960 ArsC family DNK48_RS06385 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS06385 PF00501 AMP-binding enzyme DNK48_RS06395 PF07282 Putative transposase DNA-binding domain DNK48_RS06395 PF01385 Probable transposase DNK48_RS06395 PF12323 Helix-turn-helix domain DNK48_RS06410 PF00698 Acyl transferase domain DNK48_RS06410 PF00975 Thioesterase domain DNK48_RS06410 PF08990 Erythronolide synthase docking DNK48_RS06410 PF08659 KR domain DNK48_RS06410 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06410 PF00698 Acyl transferase domain DNK48_RS06410 PF00975 Thioesterase domain DNK48_RS06410 PF18369 Polyketide synthase dimerisation element domain DNK48_RS06410 PF18369 Polyketide synthase dimerisation element domain DNK48_RS06410 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06410 PF08990 Erythronolide synthase docking DNK48_RS06410 PF00550 Phosphopantetheine attachment site DNK48_RS06410 PF08659 KR domain DNK48_RS06410 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06410 PF00550 Phosphopantetheine attachment site DNK48_RS06410 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06410 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06410 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06415 PF00698 Acyl transferase domain DNK48_RS06415 PF14765 Polyketide synthase dehydratase DNK48_RS06415 PF00698 Acyl transferase domain DNK48_RS06415 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06415 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06415 PF08990 Erythronolide synthase docking DNK48_RS06415 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS06415 PF00550 Phosphopantetheine attachment site DNK48_RS06415 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06415 PF08659 KR domain DNK48_RS06415 PF08990 Erythronolide synthase docking DNK48_RS06415 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06415 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06415 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06415 PF08659 KR domain DNK48_RS06415 PF00550 Phosphopantetheine attachment site DNK48_RS06415 PF14765 Polyketide synthase dehydratase DNK48_RS06415 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS06420 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06420 PF08990 Erythronolide synthase docking DNK48_RS06420 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS06420 PF00698 Acyl transferase domain DNK48_RS06420 PF00698 Acyl transferase domain DNK48_RS06420 PF08659 KR domain DNK48_RS06420 PF00550 Phosphopantetheine attachment site DNK48_RS06420 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06420 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06420 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS06420 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06420 PF14765 Polyketide synthase dehydratase DNK48_RS06420 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06420 PF14765 Polyketide synthase dehydratase DNK48_RS06420 PF08659 KR domain DNK48_RS06420 PF00550 Phosphopantetheine attachment site DNK48_RS06420 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06420 PF08990 Erythronolide synthase docking DNK48_RS06425 PF12680 SnoaL-like domain DNK48_RS06430 PF12680 SnoaL-like domain DNK48_RS06435 PF01494 FAD binding domain DNK48_RS06445 PF14765 Polyketide synthase dehydratase DNK48_RS06445 PF08659 KR domain DNK48_RS06445 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06445 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06445 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06445 PF00698 Acyl transferase domain DNK48_RS06445 PF00550 Phosphopantetheine attachment site DNK48_RS06455 PF00067 Cytochrome P450 DNK48_RS06465 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06465 PF08659 KR domain DNK48_RS06465 PF18369 Polyketide synthase dimerisation element domain DNK48_RS06465 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06465 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06465 PF08990 Erythronolide synthase docking DNK48_RS06465 PF00975 Thioesterase domain DNK48_RS06465 PF00550 Phosphopantetheine attachment site DNK48_RS06465 PF00698 Acyl transferase domain DNK48_RS06475 PF00698 Acyl transferase domain DNK48_RS06475 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS06475 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06475 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06475 PF08659 KR domain DNK48_RS06475 PF00550 Phosphopantetheine attachment site DNK48_RS06475 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06475 PF14765 Polyketide synthase dehydratase DNK48_RS06480 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06480 PF00698 Acyl transferase domain DNK48_RS06480 PF14765 Polyketide synthase dehydratase DNK48_RS06480 PF00550 Phosphopantetheine attachment site DNK48_RS06480 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS06480 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06480 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06480 PF08659 KR domain DNK48_RS06490 PF00550 Phosphopantetheine attachment site DNK48_RS06490 PF14765 Polyketide synthase dehydratase DNK48_RS06490 PF08659 KR domain DNK48_RS06490 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06490 PF00698 Acyl transferase domain DNK48_RS06490 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06490 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS06495 PF08241 Methyltransferase domain DNK48_RS06500 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS06500 PF03704 Bacterial transcriptional activator domain DNK48_RS06510 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DNK48_RS06510 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DNK48_RS06515 PF04072 Leucine carboxyl methyltransferase DNK48_RS06525 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS06525 PF02861 Clp amino terminal domain, pathogenicity island component DNK48_RS06525 PF17871 AAA lid domain DNK48_RS06525 PF07724 AAA domain (Cdc48 subfamily) DNK48_RS06525 PF10431 C-terminal, D2-small domain, of ClpB protein DNK48_RS06535 PF12680 SnoaL-like domain DNK48_RS06535 PF08281 Sigma-70, region 4 DNK48_RS06535 PF04542 Sigma-70 region 2 DNK48_RS06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS06545 PF00171 Aldehyde dehydrogenase family DNK48_RS06575 PF02567 Phenazine biosynthesis-like protein DNK48_RS06580 PF04227 Indigoidine synthase A like protein DNK48_RS06585 PF00294 pfkB family carbohydrate kinase DNK48_RS06600 PF00975 Thioesterase domain DNK48_RS06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS06625 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS06625 PF17203 Single cache domain 3 DNK48_RS06625 PF00989 PAS fold DNK48_RS06635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS06635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS06650 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS06650 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS06665 PF00202 Aminotransferase class-III DNK48_RS06670 PF04715 Anthranilate synthase component I, N terminal region DNK48_RS06670 PF00425 chorismate binding enzyme DNK48_RS06670 PF00117 Glutamine amidotransferase class-I DNK48_RS06695 PF08946 Osmosensory transporter coiled coil DNK48_RS06695 PF00083 Sugar (and other) transporter DNK48_RS06700 PF03702 Anhydro-N-acetylmuramic acid kinase DNK48_RS06715 PF00012 Hsp70 protein DNK48_RS06720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNK48_RS06720 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS06735 PF08546 Ketopantoate reductase PanE/ApbA C terminal DNK48_RS06735 PF02558 Ketopantoate reductase PanE/ApbA DNK48_RS06745 PF01037 Lrp/AsnC ligand binding domain DNK48_RS06755 PF01613 Flavin reductase like domain DNK48_RS06760 PF00296 Luciferase-like monooxygenase DNK48_RS06775 PF00561 alpha/beta hydrolase fold DNK48_RS06780 PF00171 Aldehyde dehydrogenase family DNK48_RS06785 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS06785 PF07729 FCD domain DNK48_RS06790 PF01915 Glycosyl hydrolase family 3 C-terminal domain DNK48_RS06790 PF14310 Fibronectin type III-like domain DNK48_RS06790 PF00933 Glycosyl hydrolase family 3 N terminal domain DNK48_RS06800 PF04542 Sigma-70 region 2 DNK48_RS06800 PF04539 Sigma-70 region 3 DNK48_RS06800 PF04545 Sigma-70, region 4 DNK48_RS06810 PF00296 Luciferase-like monooxygenase DNK48_RS06830 PF02837 Glycosyl hydrolases family 2, sugar binding domain DNK48_RS06830 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain DNK48_RS06830 PF00703 Glycosyl hydrolases family 2 DNK48_RS06840 PF14791 DNA polymerase beta thumb DNK48_RS06840 PF14716 Helix-hairpin-helix domain DNK48_RS06840 PF02811 PHP domain DNK48_RS06845 PF03167 Uracil DNA glycosylase superfamily DNK48_RS06850 PF02983 Alpha-lytic protease prodomain DNK48_RS06850 PF00089 Trypsin DNK48_RS06865 PF00232 Glycosyl hydrolase family 1 DNK48_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS06875 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS06880 PF01547 Bacterial extracellular solute-binding protein DNK48_RS06885 PF00480 ROK family DNK48_RS06885 PF01047 MarR family DNK48_RS06890 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS06910 PF01220 Dehydroquinase class II DNK48_RS06915 PF08220 DeoR-like helix-turn-helix domain DNK48_RS06915 PF00455 DeoR C terminal sensor domain DNK48_RS06920 PF01380 SIS domain DNK48_RS06925 PF01116 Fructose-bisphosphate aldolase class-II DNK48_RS06940 PF12680 SnoaL-like domain DNK48_RS06940 PF04542 Sigma-70 region 2 DNK48_RS06940 PF08281 Sigma-70, region 4 DNK48_RS06950 PF00689 Cation transporting ATPase, C-terminus DNK48_RS06975 PF00072 Response regulator receiver domain DNK48_RS06975 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS06980 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS06980 PF00672 HAMP domain DNK48_RS06985 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS06985 PF00912 Transglycosylase DNK48_RS06995 PF00115 Cytochrome C and Quinol oxidase polypeptide I DNK48_RS07010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DNK48_RS07010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DNK48_RS07010 PF06827 Zinc finger found in FPG and IleRS DNK48_RS07050 PF00108 Thiolase, N-terminal domain DNK48_RS07050 PF02803 Thiolase, C-terminal domain DNK48_RS07065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS07065 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS07065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS07075 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS07085 PF18158 Adaptive response protein AidB N-terminal domain DNK48_RS07085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS07085 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS07090 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS07110 PF00067 Cytochrome P450 DNK48_RS07115 PF00149 Calcineurin-like phosphoesterase DNK48_RS07125 PF07311 Dodecin DNK48_RS07135 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS07140 PF00456 Transketolase, thiamine diphosphate binding domain DNK48_RS07145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS07150 PF01494 FAD binding domain DNK48_RS07155 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DNK48_RS07155 PF06827 Zinc finger found in FPG and IleRS DNK48_RS07170 PF03559 NDP-hexose 2,3-dehydratase DNK48_RS07175 PF00248 Aldo/keto reductase family DNK48_RS07180 PF04321 RmlD substrate binding domain DNK48_RS07185 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS07185 PF00072 Response regulator receiver domain DNK48_RS07190 PF00672 HAMP domain DNK48_RS07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS07190 PF07730 Histidine kinase DNK48_RS07200 PF00005 ABC transporter DNK48_RS07205 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DNK48_RS07210 PF06722 Protein of unknown function (DUF1205) DNK48_RS07215 PF00975 Thioesterase domain DNK48_RS07220 PF14765 Polyketide synthase dehydratase DNK48_RS07220 PF00550 Phosphopantetheine attachment site DNK48_RS07220 PF08659 KR domain DNK48_RS07220 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS07220 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS07220 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS07220 PF00698 Acyl transferase domain DNK48_RS07225 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS07225 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS07225 PF00698 Acyl transferase domain DNK48_RS07225 PF14765 Polyketide synthase dehydratase DNK48_RS07225 PF00550 Phosphopantetheine attachment site DNK48_RS07225 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS07225 PF08659 KR domain DNK48_RS07230 PF00975 Thioesterase domain DNK48_RS07230 PF00550 Phosphopantetheine attachment site DNK48_RS07230 PF18369 Polyketide synthase dimerisation element domain DNK48_RS07230 PF08990 Erythronolide synthase docking DNK48_RS07230 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS07230 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS07230 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS07230 PF00698 Acyl transferase domain DNK48_RS07230 PF08659 KR domain DNK48_RS07235 PF08659 KR domain DNK48_RS07235 PF00975 Thioesterase domain DNK48_RS07235 PF00550 Phosphopantetheine attachment site DNK48_RS07235 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS07235 PF18369 Polyketide synthase dimerisation element domain DNK48_RS07235 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS07235 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS07235 PF08990 Erythronolide synthase docking DNK48_RS07235 PF00698 Acyl transferase domain DNK48_RS07265 PF16363 GDP-mannose 4,6 dehydratase DNK48_RS07270 PF00483 Nucleotidyl transferase DNK48_RS07280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS07280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS07300 PF00689 Cation transporting ATPase, C-terminus DNK48_RS07305 PF16916 Dimerisation domain of Zinc Transporter DNK48_RS07305 PF01545 Cation efflux family DNK48_RS07315 PF02514 CobN/Magnesium Chelatase DNK48_RS07320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DNK48_RS07325 PF02570 Precorrin-8X methylmutase DNK48_RS07330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNK48_RS07335 PF02571 Precorrin-6x reductase CbiJ/CobK DNK48_RS07340 PF01888 CbiD DNK48_RS07345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNK48_RS07350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNK48_RS07355 PF00132 Bacterial transferase hexapeptide (six repeats) DNK48_RS07370 PF01642 Methylmalonyl-CoA mutase DNK48_RS07370 PF02310 B12 binding domain DNK48_RS07375 PF01642 Methylmalonyl-CoA mutase DNK48_RS07380 PF00067 Cytochrome P450 DNK48_RS07405 PF01569 PAP2 superfamily DNK48_RS07415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DNK48_RS07415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DNK48_RS07420 PF01638 HxlR-like helix-turn-helix DNK48_RS07425 PF00083 Sugar (and other) transporter DNK48_RS07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS07450 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS07450 PF00672 HAMP domain DNK48_RS07455 PF00072 Response regulator receiver domain DNK48_RS07455 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS07465 PF00106 short chain dehydrogenase DNK48_RS07470 PF13186 Iron-sulfur cluster-binding domain DNK48_RS07470 PF04055 Radical SAM superfamily DNK48_RS07475 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DNK48_RS07480 PF03070 TENA/THI-4/PQQC family DNK48_RS07495 PF07995 Glucose / Sorbosone dehydrogenase DNK48_RS07505 PF01497 Periplasmic binding protein DNK48_RS07510 PF00120 Glutamine synthetase, catalytic domain DNK48_RS07510 PF03951 Glutamine synthetase, beta-Grasp domain DNK48_RS07525 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS07530 PF00106 short chain dehydrogenase DNK48_RS07535 PF17678 Glycosyl hydrolase family 92 N-terminal domain DNK48_RS07535 PF07971 Glycosyl hydrolase family 92 DNK48_RS07540 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS07540 PF00107 Zinc-binding dehydrogenase DNK48_RS07545 PF10605 3HB-oligomer hydrolase (3HBOH) DNK48_RS07550 PF03600 Citrate transporter DNK48_RS07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS07555 PF03466 LysR substrate binding domain DNK48_RS07560 PF02515 CoA-transferase family III DNK48_RS07565 PF03328 HpcH/HpaI aldolase/citrate lyase family DNK48_RS07570 PF01872 RibD C-terminal domain DNK48_RS07600 PF00144 Beta-lactamase DNK48_RS07610 PF00072 Response regulator receiver domain DNK48_RS07610 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS07625 PF12680 SnoaL-like domain DNK48_RS07625 PF08281 Sigma-70, region 4 DNK48_RS07625 PF04542 Sigma-70 region 2 DNK48_RS07630 PF02927 Cellulase N-terminal ig-like domain DNK48_RS07630 PF00759 Glycosyl hydrolase family 9 DNK48_RS07630 PF02018 Carbohydrate binding domain DNK48_RS07635 PF00255 Glutathione peroxidase DNK48_RS07645 PF04264 YceI-like domain DNK48_RS07650 PF02954 Bacterial regulatory protein, Fis family DNK48_RS07650 PF01590 GAF domain DNK48_RS07700 PF08962 Domain of unknown function (DUF1876) DNK48_RS07705 PF01738 Dienelactone hydrolase family DNK48_RS07705 PF00156 Phosphoribosyl transferase domain DNK48_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS07725 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS07730 PF01547 Bacterial extracellular solute-binding protein DNK48_RS07740 PF00455 DeoR C terminal sensor domain DNK48_RS07740 PF08220 DeoR-like helix-turn-helix domain DNK48_RS07745 PF11975 Family 4 glycosyl hydrolase C-terminal domain DNK48_RS07745 PF02056 Family 4 glycosyl hydrolase DNK48_RS07755 PF01547 Bacterial extracellular solute-binding protein DNK48_RS07760 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS07765 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS07770 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS07770 PF16912 Glucose dehydrogenase C-terminus DNK48_RS07775 PF01494 FAD binding domain DNK48_RS07780 PF00455 DeoR C terminal sensor domain DNK48_RS07780 PF08220 DeoR-like helix-turn-helix domain DNK48_RS07785 PF02031 Streptomyces extracellular neutral proteinase (M7) family DNK48_RS07790 PF00570 HRDC domain DNK48_RS07790 PF16124 RecQ zinc-binding DNK48_RS07790 PF09382 RQC domain DNK48_RS07790 PF00271 Helicase conserved C-terminal domain DNK48_RS07790 PF00270 DEAD/DEAH box helicase DNK48_RS07810 PF02983 Alpha-lytic protease prodomain DNK48_RS07815 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS07815 PF07729 FCD domain DNK48_RS07825 PF02358 Trehalose-phosphatase DNK48_RS07825 PF03636 Glycosyl hydrolase family 65, N-terminal domain DNK48_RS07825 PF03632 Glycosyl hydrolase family 65 central catalytic domain DNK48_RS07825 PF03633 Glycosyl hydrolase family 65, C-terminal domain DNK48_RS07850 PF07690 Major Facilitator Superfamily DNK48_RS07860 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS07865 PF00005 ABC transporter DNK48_RS07875 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS07880 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DNK48_RS07880 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DNK48_RS07890 PF00741 Gas vesicle protein DNK48_RS07890 PF05121 Gas vesicle protein K DNK48_RS07895 PF00741 Gas vesicle protein DNK48_RS07905 PF00741 Gas vesicle protein DNK48_RS07925 PF00741 Gas vesicle protein DNK48_RS07940 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DNK48_RS07940 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS07945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS07945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS07950 PF00230 Major intrinsic protein DNK48_RS07955 PF04030 D-arabinono-1,4-lactone oxidase DNK48_RS07955 PF01565 FAD binding domain DNK48_RS07960 PF09364 XFP N-terminal domain DNK48_RS07960 PF09363 XFP C-terminal domain DNK48_RS07960 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DNK48_RS07965 PF00582 Universal stress protein family DNK48_RS07970 PF00478 IMP dehydrogenase / GMP reductase domain DNK48_RS07970 PF00571 CBS domain DNK48_RS07975 PF00582 Universal stress protein family DNK48_RS07985 PF00107 Zinc-binding dehydrogenase DNK48_RS07985 PF13823 Alcohol dehydrogenase GroES-associated DNK48_RS07985 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS07990 PF00582 Universal stress protein family DNK48_RS07995 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DNK48_RS07995 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DNK48_RS08000 PF00478 IMP dehydrogenase / GMP reductase domain DNK48_RS08000 PF00571 CBS domain DNK48_RS08010 PF00072 Response regulator receiver domain DNK48_RS08010 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS08020 PF07730 Histidine kinase DNK48_RS08020 PF13185 GAF domain DNK48_RS08020 PF13492 GAF domain DNK48_RS08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS08035 PF08241 Methyltransferase domain DNK48_RS08050 PF01327 Polypeptide deformylase DNK48_RS08065 PF14535 AMP-binding enzyme C-terminal domain DNK48_RS08065 PF00501 AMP-binding enzyme DNK48_RS08085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS08085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS08090 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS08095 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS08105 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS08115 PF00931 NB-ARC domain DNK48_RS08115 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS08115 PF03704 Bacterial transcriptional activator domain DNK48_RS08145 PF10531 SLBB domain DNK48_RS08145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DNK48_RS08145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DNK48_RS08160 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS08165 PF03756 A-factor biosynthesis hotdog domain DNK48_RS08170 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS08185 PF00248 Aldo/keto reductase family DNK48_RS08190 PF17042 Nucleotide-binding C-terminal domain DNK48_RS08190 PF07005 Sugar-binding N-terminal domain DNK48_RS08195 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DNK48_RS08200 PF00455 DeoR C terminal sensor domain DNK48_RS08200 PF08220 DeoR-like helix-turn-helix domain DNK48_RS08210 PF00005 ABC transporter DNK48_RS08210 PF00664 ABC transporter transmembrane region DNK48_RS08215 PF07859 alpha/beta hydrolase fold DNK48_RS08225 PF04539 Sigma-70 region 3 DNK48_RS08225 PF04545 Sigma-70, region 4 DNK48_RS08225 PF04542 Sigma-70 region 2 DNK48_RS08230 PF01738 Dienelactone hydrolase family DNK48_RS08230 PF00156 Phosphoribosyl transferase domain DNK48_RS08235 PF04679 ATP dependent DNA ligase C terminal region DNK48_RS08235 PF01068 ATP dependent DNA ligase domain DNK48_RS08240 PF13298 DNA polymerase Ligase (LigD) DNK48_RS08240 PF01068 ATP dependent DNA ligase domain DNK48_RS08240 PF04679 ATP dependent DNA ligase C terminal region DNK48_RS08245 PF01965 DJ-1/PfpI family DNK48_RS08245 PF12833 Helix-turn-helix domain DNK48_RS08250 PF00710 Asparaginase, N-terminal DNK48_RS08250 PF17763 Glutaminase/Asparaginase C-terminal domain DNK48_RS08255 PF13466 STAS domain DNK48_RS08255 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS08255 PF08448 PAS fold DNK48_RS08255 PF13581 Histidine kinase-like ATPase domain DNK48_RS08265 PF16859 Tetracyclin repressor-like, C-terminal domain DNK48_RS08265 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS08270 PF12680 SnoaL-like domain DNK48_RS08275 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS08320 PF01255 Putative undecaprenyl diphosphate synthase DNK48_RS08325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS08325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS08325 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS08335 PF01327 Polypeptide deformylase DNK48_RS08340 PF08245 Mur ligase middle domain DNK48_RS08340 PF08353 Domain of unknown function (DUF1727) DNK48_RS08345 PF07685 CobB/CobQ-like glutamine amidotransferase domain DNK48_RS08350 PF00365 Phosphofructokinase DNK48_RS08355 PF05425 Copper resistance protein D DNK48_RS08355 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DNK48_RS08360 PF00067 Cytochrome P450 DNK48_RS08390 PF00561 alpha/beta hydrolase fold DNK48_RS08395 PF01774 UreD urease accessory protein DNK48_RS08400 PF02492 CobW/HypB/UreG, nucleotide-binding domain DNK48_RS08405 PF01730 UreF DNK48_RS08410 PF01979 Amidohydrolase family DNK48_RS08410 PF00449 Urease alpha-subunit, N-terminal domain DNK48_RS08415 PF00699 Urease beta subunit DNK48_RS08420 PF00547 Urease, gamma subunit DNK48_RS08425 PF01483 Proprotein convertase P-domain DNK48_RS08425 PF04389 Peptidase family M28 DNK48_RS08435 PF00574 Clp protease DNK48_RS08445 PF00877 NlpC/P60 family DNK48_RS08475 PF00155 Aminotransferase class I and II DNK48_RS08480 PF06968 Biotin and Thiamin Synthesis associated domain DNK48_RS08480 PF04055 Radical SAM superfamily DNK48_RS08485 PF00202 Aminotransferase class-III DNK48_RS08495 PF01209 ubiE/COQ5 methyltransferase family DNK48_RS08500 PF12704 MacB-like periplasmic core domain DNK48_RS08500 PF02687 FtsX-like permease family DNK48_RS08500 PF00005 ABC transporter DNK48_RS08505 PF00296 Luciferase-like monooxygenase DNK48_RS08515 PF01595 Cyclin M transmembrane N-terminal domain DNK48_RS08515 PF03471 Transporter associated domain DNK48_RS08515 PF00571 CBS domain DNK48_RS08520 PF01595 Cyclin M transmembrane N-terminal domain DNK48_RS08520 PF00571 CBS domain DNK48_RS08545 PF10397 Adenylosuccinate lyase C-terminus DNK48_RS08545 PF00206 Lyase DNK48_RS08550 PF03167 Uracil DNA glycosylase superfamily DNK48_RS08560 PF01300 Telomere recombination DNK48_RS08570 PF00480 ROK family DNK48_RS08575 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS08575 PF07702 UTRA domain DNK48_RS08585 PF00364 Biotin-requiring enzyme DNK48_RS08585 PF00561 alpha/beta hydrolase fold DNK48_RS08605 PF01053 Cys/Met metabolism PLP-dependent enzyme DNK48_RS08630 PF00149 Calcineurin-like phosphoesterase DNK48_RS08630 PF12320 Type 5 capsule protein repressor C-terminal domain DNK48_RS08635 PF09186 Domain of unknown function (DUF1949) DNK48_RS08635 PF01205 Uncharacterized protein family UPF0029 DNK48_RS08645 PF07690 Major Facilitator Superfamily DNK48_RS08655 PF16875 Glycosyl hydrolase family 36 N-terminal domain DNK48_RS08655 PF16874 Glycosyl hydrolase family 36 C-terminal domain DNK48_RS08675 PF12833 Helix-turn-helix domain DNK48_RS08690 PF02627 Carboxymuconolactone decarboxylase family DNK48_RS08695 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS08695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS08695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS08700 PF05726 Pirin C-terminal cupin domain DNK48_RS08700 PF02678 Pirin DNK48_RS08735 PF04960 Glutaminase DNK48_RS08740 PF00561 alpha/beta hydrolase fold DNK48_RS08750 PF00857 Isochorismatase family DNK48_RS08760 PF12852 Cupin DNK48_RS08760 PF12833 Helix-turn-helix domain DNK48_RS08765 PF13380 CoA binding domain DNK48_RS08805 PF00132 Bacterial transferase hexapeptide (six repeats) DNK48_RS08810 PF09335 SNARE associated Golgi protein DNK48_RS08835 PF03144 Elongation factor Tu domain 2 DNK48_RS08835 PF03143 Elongation factor Tu C-terminal domain DNK48_RS08835 PF00009 Elongation factor Tu GTP binding domain DNK48_RS08845 PF00083 Sugar (and other) transporter DNK48_RS08850 PF02673 Bacitracin resistance protein BacA DNK48_RS08860 PF01613 Flavin reductase like domain DNK48_RS08875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS08875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS08895 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS08905 PF02447 GntP family permease DNK48_RS08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS08920 PF17203 Single cache domain 3 DNK48_RS08920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS08920 PF00989 PAS fold DNK48_RS08925 PF00072 Response regulator receiver domain DNK48_RS08970 PF03466 LysR substrate binding domain DNK48_RS08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS08975 PF02056 Family 4 glycosyl hydrolase DNK48_RS08975 PF11975 Family 4 glycosyl hydrolase C-terminal domain DNK48_RS08980 PF00294 pfkB family carbohydrate kinase DNK48_RS08985 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS09010 PF03259 Roadblock/LC7 domain DNK48_RS09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS09015 PF08521 Two-component sensor kinase N-terminal DNK48_RS09015 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS09030 PF00474 Sodium:solute symporter family DNK48_RS09055 PF00141 Peroxidase DNK48_RS09060 PF01475 Ferric uptake regulator family DNK48_RS09075 PF08245 Mur ligase middle domain DNK48_RS09115 PF14765 Polyketide synthase dehydratase DNK48_RS09115 PF08659 KR domain DNK48_RS09115 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS09115 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS09115 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS09115 PF00698 Acyl transferase domain DNK48_RS09115 PF00550 Phosphopantetheine attachment site DNK48_RS09115 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS09115 PF08990 Erythronolide synthase docking DNK48_RS09120 PF00668 Condensation domain DNK48_RS09120 PF07993 Male sterility protein DNK48_RS09120 PF00550 Phosphopantetheine attachment site DNK48_RS09120 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09120 PF00501 AMP-binding enzyme DNK48_RS09135 PF03176 MMPL family DNK48_RS09160 PF00107 Zinc-binding dehydrogenase DNK48_RS09160 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS09180 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS09180 PF13305 Tetracyclin repressor-like, C-terminal domain DNK48_RS09215 PF00067 Cytochrome P450 DNK48_RS09225 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS09230 PF00005 ABC transporter DNK48_RS09240 PF01915 Glycosyl hydrolase family 3 C-terminal domain DNK48_RS09240 PF00933 Glycosyl hydrolase family 3 N terminal domain DNK48_RS09240 PF14310 Fibronectin type III-like domain DNK48_RS09245 PF08532 Beta-galactosidase trimerisation domain DNK48_RS09245 PF08533 Beta-galactosidase C-terminal domain DNK48_RS09245 PF02449 Beta-galactosidase DNK48_RS09250 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS09270 PF00135 Carboxylesterase family DNK48_RS09275 PF00753 Metallo-beta-lactamase superfamily DNK48_RS09280 PF00553 Cellulose binding domain DNK48_RS09280 PF00331 Glycosyl hydrolase family 10 DNK48_RS09285 PF00457 Glycosyl hydrolases family 11 DNK48_RS09285 PF01522 Polysaccharide deacetylase DNK48_RS09290 PF00682 HMGL-like DNK48_RS09290 PF07836 DmpG-like communication domain DNK48_RS09295 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNK48_RS09295 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DNK48_RS09300 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS09315 PF00561 alpha/beta hydrolase fold DNK48_RS09345 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS09360 PF05336 L-rhamnose mutarotase DNK48_RS09370 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS09375 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS09380 PF00005 ABC transporter DNK48_RS09385 PF08531 Alpha-L-rhamnosidase N-terminal domain DNK48_RS09385 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain DNK48_RS09385 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DNK48_RS09385 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain DNK48_RS09395 PF00596 Class II Aldolase and Adducin N-terminal domain DNK48_RS09400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS09400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS09405 PF02754 Cysteine-rich domain DNK48_RS09410 PF02589 LUD domain DNK48_RS09410 PF11870 Domain of unknown function (DUF3390) DNK48_RS09410 PF13183 4Fe-4S dicluster domain DNK48_RS09415 PF02589 LUD domain DNK48_RS09425 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS09435 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DNK48_RS09435 PF16353 Domain of unknown function(DUF4981) DNK48_RS09435 PF02929 Beta galactosidase small chain DNK48_RS09435 PF02837 Glycosyl hydrolases family 2, sugar binding domain DNK48_RS09440 PF00578 AhpC/TSA family DNK48_RS09450 PF00722 Glycosyl hydrolases family 16 DNK48_RS09455 PF00480 ROK family DNK48_RS09455 PF01047 MarR family DNK48_RS09460 PF01047 MarR family DNK48_RS09460 PF00480 ROK family DNK48_RS09465 PF00023 Ankyrin repeat DNK48_RS09465 PF12796 Ankyrin repeats (3 copies) DNK48_RS09480 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS09480 PF07729 FCD domain DNK48_RS09490 PF13397 RNA polymerase-binding protein DNK48_RS09515 PF00535 Glycosyl transferase family 2 DNK48_RS09530 PF01037 Lrp/AsnC ligand binding domain DNK48_RS09540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS09540 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS09540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS09545 PF00704 Glycosyl hydrolases family 18 DNK48_RS09545 PF00553 Cellulose binding domain DNK48_RS09545 PF00041 Fibronectin type III domain DNK48_RS09555 PF00171 Aldehyde dehydrogenase family DNK48_RS09570 PF16363 GDP-mannose 4,6 dehydratase DNK48_RS09590 PF00293 NUDIX domain DNK48_RS09595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DNK48_RS09610 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) DNK48_RS09620 PF01658 Myo-inositol-1-phosphate synthase DNK48_RS09630 PF00248 Aldo/keto reductase family DNK48_RS09635 PF13649 Methyltransferase domain DNK48_RS09655 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09655 PF00501 AMP-binding enzyme DNK48_RS09660 PF00293 NUDIX domain DNK48_RS09665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DNK48_RS09665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DNK48_RS09670 PF00999 Sodium/hydrogen exchanger family DNK48_RS09675 PF04820 Tryptophan halogenase DNK48_RS09680 PF03301 Tryptophan 2,3-dioxygenase DNK48_RS09685 PF12697 Alpha/beta hydrolase family DNK48_RS09695 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS09700 PF00288 GHMP kinases N terminal domain DNK48_RS09705 PF00206 Lyase DNK48_RS09705 PF14698 Argininosuccinate lyase C-terminal DNK48_RS09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS09710 PF07730 Histidine kinase DNK48_RS09715 PF00668 Condensation domain DNK48_RS09715 PF00975 Thioesterase domain DNK48_RS09715 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09715 PF00501 AMP-binding enzyme DNK48_RS09715 PF00550 Phosphopantetheine attachment site DNK48_RS09720 PF00668 Condensation domain DNK48_RS09720 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09720 PF00501 AMP-binding enzyme DNK48_RS09720 PF00550 Phosphopantetheine attachment site DNK48_RS09725 PF00550 Phosphopantetheine attachment site DNK48_RS09725 PF00501 AMP-binding enzyme DNK48_RS09725 PF00975 Thioesterase domain DNK48_RS09725 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09725 PF00668 Condensation domain DNK48_RS09730 PF00975 Thioesterase domain DNK48_RS09730 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09730 PF00550 Phosphopantetheine attachment site DNK48_RS09730 PF00501 AMP-binding enzyme DNK48_RS09730 PF00668 Condensation domain DNK48_RS09735 PF00501 AMP-binding enzyme DNK48_RS09735 PF00668 Condensation domain DNK48_RS09735 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09735 PF00550 Phosphopantetheine attachment site DNK48_RS09740 PF00501 AMP-binding enzyme DNK48_RS09740 PF00668 Condensation domain DNK48_RS09740 PF00550 Phosphopantetheine attachment site DNK48_RS09740 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09740 PF00975 Thioesterase domain DNK48_RS09745 PF03621 MbtH-like protein DNK48_RS09750 PF01613 Flavin reductase like domain DNK48_RS09765 PF00005 ABC transporter DNK48_RS09770 PF00072 Response regulator receiver domain DNK48_RS09770 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS09775 PF00975 Thioesterase domain DNK48_RS09775 PF00668 Condensation domain DNK48_RS09775 PF00550 Phosphopantetheine attachment site DNK48_RS09775 PF00501 AMP-binding enzyme DNK48_RS09775 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09780 PF00005 ABC transporter DNK48_RS09780 PF00664 ABC transporter transmembrane region DNK48_RS09785 PF00155 Aminotransferase class I and II DNK48_RS09795 PF00067 Cytochrome P450 DNK48_RS09800 PF00668 Condensation domain DNK48_RS09800 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS09800 PF00501 AMP-binding enzyme DNK48_RS09800 PF00550 Phosphopantetheine attachment site DNK48_RS09805 PF00550 Phosphopantetheine attachment site DNK48_RS09805 PF07993 Male sterility protein DNK48_RS09815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS09815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS09815 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS09820 PF00501 AMP-binding enzyme DNK48_RS09835 PF08502 LeuA allosteric (dimerisation) domain DNK48_RS09835 PF00682 HMGL-like DNK48_RS09840 PF00330 Aconitase family (aconitate hydratase) DNK48_RS09845 PF00694 Aconitase C-terminal domain DNK48_RS09850 PF00180 Isocitrate/isopropylmalate dehydrogenase DNK48_RS09860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS09860 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS09865 PF16363 GDP-mannose 4,6 dehydratase DNK48_RS09875 PF00563 EAL domain DNK48_RS09875 PF00990 Diguanylate cyclase, GGDEF domain DNK48_RS09875 PF13188 PAS domain DNK48_RS09875 PF03707 Bacterial signalling protein N terminal repeat DNK48_RS09880 PF13556 PucR C-terminal helix-turn-helix domain DNK48_RS09880 PF07905 Purine catabolism regulatory protein-like family DNK48_RS09900 PF17866 AAA lid domain DNK48_RS09900 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS09905 PF01595 Cyclin M transmembrane N-terminal domain DNK48_RS09905 PF00571 CBS domain DNK48_RS09910 PF03471 Transporter associated domain DNK48_RS09910 PF00571 CBS domain DNK48_RS09910 PF01595 Cyclin M transmembrane N-terminal domain DNK48_RS09920 PF08029 HisG, C-terminal domain DNK48_RS09920 PF01634 ATP phosphoribosyltransferase DNK48_RS09925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DNK48_RS09930 PF00885 6,7-dimethyl-8-ribityllumazine synthase DNK48_RS09935 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DNK48_RS09935 PF00925 GTP cyclohydrolase II DNK48_RS09940 PF00677 Lumazine binding domain DNK48_RS09945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNK48_RS09945 PF01872 RibD C-terminal domain DNK48_RS09955 PF00480 ROK family DNK48_RS09960 PF07690 Major Facilitator Superfamily DNK48_RS09970 PF00860 Permease family DNK48_RS09990 PF01593 Flavin containing amine oxidoreductase DNK48_RS09995 PF00795 Carbon-nitrogen hydrolase DNK48_RS10010 PF13520 Amino acid permease DNK48_RS10025 PF00478 IMP dehydrogenase / GMP reductase domain DNK48_RS10025 PF00571 CBS domain DNK48_RS10035 PF01494 FAD binding domain DNK48_RS10045 PF01022 Bacterial regulatory protein, arsR family DNK48_RS10055 PF01872 RibD C-terminal domain DNK48_RS10060 PF04198 Putative sugar-binding domain DNK48_RS10065 PF00834 Ribulose-phosphate 3 epimerase family DNK48_RS10075 PF01029 NusB family DNK48_RS10075 PF01189 16S rRNA methyltransferase RsmB/F DNK48_RS10080 PF00005 ABC transporter DNK48_RS10080 PF00664 ABC transporter transmembrane region DNK48_RS10085 PF00551 Formyl transferase DNK48_RS10085 PF02911 Formyl transferase, C-terminal domain DNK48_RS10095 PF17764 3′ DNA-binding domain (3′BD) DNK48_RS10100 PF02773 S-adenosylmethionine synthetase, C-terminal domain DNK48_RS10100 PF00438 S-adenosylmethionine synthetase, N-terminal domain DNK48_RS10100 PF02772 S-adenosylmethionine synthetase, central domain DNK48_RS10110 PF02441 Flavoprotein DNK48_RS10110 PF04127 DNA / pantothenate metabolism flavoprotein DNK48_RS10115 PF01192 RNA polymerase Rpb6 DNK48_RS10120 PF00625 Guanylate kinase DNK48_RS10130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DNK48_RS10135 PF01180 Dihydroorotate dehydrogenase DNK48_RS10140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNK48_RS10140 PF02142 MGS-like domain DNK48_RS10140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DNK48_RS10145 PF00117 Glutamine amidotransferase class-I DNK48_RS10145 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DNK48_RS10155 PF01979 Amidohydrolase family DNK48_RS10160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DNK48_RS10160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DNK48_RS10165 PF00156 Phosphoribosyl transferase domain DNK48_RS10175 PF01029 NusB family DNK48_RS10180 PF08207 Elongation factor P (EF-P) KOW-like domain DNK48_RS10180 PF01132 Elongation factor P (EF-P) OB domain DNK48_RS10180 PF09285 Elongation factor P, C-terminal DNK48_RS10185 PF00557 Metallopeptidase family M24 DNK48_RS10185 PF01321 Creatinase/Prolidase N-terminal domain DNK48_RS10195 PF01761 3-dehydroquinate synthase DNK48_RS10200 PF01202 Shikimate kinase DNK48_RS10205 PF01264 Chorismate synthase DNK48_RS10210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DNK48_RS10210 PF08501 Shikimate dehydrogenase substrate binding domain DNK48_RS10220 PF03652 Holliday junction resolvase DNK48_RS10225 PF02272 DHHA1 domain DNK48_RS10225 PF01411 tRNA synthetases class II (A) DNK48_RS10225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNK48_RS10240 PF01479 S4 domain DNK48_RS10240 PF00163 Ribosomal protein S4/S9 N-terminal domain DNK48_RS10250 PF16193 AAA C-terminal domain DNK48_RS10250 PF12002 MgsA AAA+ ATPase C terminal DNK48_RS10250 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS10260 PF00005 ABC transporter DNK48_RS10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS10270 PF07730 Histidine kinase DNK48_RS10275 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS10275 PF00072 Response regulator receiver domain DNK48_RS10280 PF13393 Histidyl-tRNA synthetase DNK48_RS10280 PF03129 Anticodon binding domain DNK48_RS10285 PF00753 Metallo-beta-lactamase superfamily DNK48_RS10290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DNK48_RS10295 PF03993 Domain of Unknown Function (DUF349) DNK48_RS10300 PF04607 Region found in RelA / SpoT proteins DNK48_RS10300 PF02824 TGS domain DNK48_RS10300 PF13291 ACT domain DNK48_RS10305 PF00156 Phosphoribosyl transferase domain DNK48_RS10310 PF02355 Protein export membrane protein DNK48_RS10310 PF07549 SecD/SecF GG Motif DNK48_RS10315 PF02355 Protein export membrane protein DNK48_RS10315 PF07549 SecD/SecF GG Motif DNK48_RS10320 PF02699 Preprotein translocase subunit DNK48_RS10325 PF17864 RuvB AAA lid domain DNK48_RS10325 PF05496 Holliday junction DNA helicase RuvB P-loop domain DNK48_RS10325 PF05491 RuvB C-terminal winged helix domain DNK48_RS10330 PF01330 RuvA N terminal domain DNK48_RS10330 PF07499 RuvA, C-terminal domain DNK48_RS10335 PF02075 Crossover junction endodeoxyribonuclease RuvC DNK48_RS10340 PF01709 Transcriptional regulator DNK48_RS10345 PF01174 SNO glutamine amidotransferase family DNK48_RS10350 PF01680 SOR/SNZ family DNK48_RS10360 PF13439 Glycosyltransferase Family 4 DNK48_RS10370 PF01066 CDP-alcohol phosphatidyltransferase DNK48_RS10375 PF00009 Elongation factor Tu GTP binding domain DNK48_RS10375 PF00679 Elongation factor G C-terminus DNK48_RS10375 PF14492 Elongation Factor G, domain II DNK48_RS10375 PF03764 Elongation factor G, domain IV DNK48_RS10375 PF03144 Elongation factor Tu domain 2 DNK48_RS10385 PF01230 HIT domain DNK48_RS10390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNK48_RS10390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNK48_RS10390 PF03129 Anticodon binding domain DNK48_RS10405 PF00929 Exonuclease DNK48_RS10440 PF04686 Streptomyces sporulation and cell division protein, SsgA DNK48_RS10470 PF00117 Glutamine amidotransferase class-I DNK48_RS10470 PF04715 Anthranilate synthase component I, N terminal region DNK48_RS10470 PF00425 chorismate binding enzyme DNK48_RS10525 PF01638 HxlR-like helix-turn-helix DNK48_RS10530 PF07690 Major Facilitator Superfamily DNK48_RS10540 PF01494 FAD binding domain DNK48_RS10665 PF13570 PQQ-like domain DNK48_RS10665 PF13360 PQQ-like domain DNK48_RS10665 PF01011 PQQ enzyme repeat DNK48_RS10665 PF00069 Protein kinase domain DNK48_RS10670 PF00588 SpoU rRNA Methylase family DNK48_RS10675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNK48_RS10675 PF14824 Sirohaem biosynthesis protein central DNK48_RS10675 PF10414 Sirohaem synthase dimerisation region DNK48_RS10680 PF02277 Phosphoribosyltransferase DNK48_RS10695 PF03180 NLPA lipoprotein DNK48_RS10705 PF00005 ABC transporter DNK48_RS10705 PF09383 NIL domain DNK48_RS10710 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS10740 PF00501 AMP-binding enzyme DNK48_RS10740 PF01553 Acyltransferase DNK48_RS10755 PF00206 Lyase DNK48_RS10755 PF14698 Argininosuccinate lyase C-terminal DNK48_RS10760 PF00764 Arginosuccinate synthase DNK48_RS10775 PF00175 Oxidoreductase NAD-binding domain DNK48_RS10775 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS10790 PF00561 alpha/beta hydrolase fold DNK48_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS10800 PF03466 LysR substrate binding domain DNK48_RS10810 PF01758 Sodium Bile acid symporter family DNK48_RS10815 PF01316 Arginine repressor, DNA binding domain DNK48_RS10815 PF02863 Arginine repressor, C-terminal domain DNK48_RS10820 PF00202 Aminotransferase class-III DNK48_RS10825 PF00696 Amino acid kinase family DNK48_RS10830 PF01960 ArgJ family DNK48_RS10835 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNK48_RS10835 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNK48_RS10840 PF03971 Monomeric isocitrate dehydrogenase DNK48_RS10860 PF00892 EamA-like transporter family DNK48_RS10870 PF02638 Glycosyl hydrolase-like 10 DNK48_RS10875 PF00942 Cellulose binding domain DNK48_RS10875 PF03442 Carbohydrate binding domain X2 DNK48_RS10880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS10880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS10890 PF07690 Major Facilitator Superfamily DNK48_RS10895 PF02308 MgtC family DNK48_RS10905 PF00293 NUDIX domain DNK48_RS10905 PF03099 Biotin/lipoate A/B protein ligase family DNK48_RS10920 PF03458 UPF0126 domain DNK48_RS10925 PF01979 Amidohydrolase family DNK48_RS10935 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DNK48_RS10935 PF01588 Putative tRNA binding domain DNK48_RS10935 PF03147 Ferredoxin-fold anticodon binding domain DNK48_RS10935 PF03484 tRNA synthetase B5 domain DNK48_RS10935 PF03483 B3/4 domain DNK48_RS10940 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DNK48_RS10940 PF01409 tRNA synthetases class II core domain (F) DNK48_RS10945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS10945 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS10945 PF00672 HAMP domain DNK48_RS10945 PF00989 PAS fold DNK48_RS10945 PF18698 Histidine kinase sensor domain DNK48_RS10950 PF08032 RNA 2'-O ribose methyltransferase substrate binding DNK48_RS10950 PF00588 SpoU rRNA Methylase family DNK48_RS10955 PF00453 Ribosomal protein L20 DNK48_RS10960 PF01632 Ribosomal protein L35 DNK48_RS10965 PF05198 Translation initiation factor IF-3, N-terminal domain DNK48_RS10965 PF00707 Translation initiation factor IF-3, C-terminal domain DNK48_RS10975 PF00230 Major intrinsic protein DNK48_RS11020 PF00171 Aldehyde dehydrogenase family DNK48_RS11025 PF00120 Glutamine synthetase, catalytic domain DNK48_RS11030 PF07729 FCD domain DNK48_RS11030 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS11035 PF13520 Amino acid permease DNK48_RS11040 PF07722 Peptidase C26 DNK48_RS11045 PF00561 alpha/beta hydrolase fold DNK48_RS11050 PF01374 Glycosyl hydrolase family 46 DNK48_RS11055 PF12706 Beta-lactamase superfamily domain DNK48_RS11100 PF04055 Radical SAM superfamily DNK48_RS11100 PF06969 HemN C-terminal domain DNK48_RS11125 PF13472 GDSL-like Lipase/Acylhydrolase family DNK48_RS11130 PF13350 Tyrosine phosphatase family DNK48_RS11140 PF00202 Aminotransferase class-III DNK48_RS11145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DNK48_RS11145 PF02779 Transketolase, pyrimidine binding domain DNK48_RS11145 PF02780 Transketolase, C-terminal domain DNK48_RS11150 PF04551 GcpE protein DNK48_RS11165 PF13243 Squalene-hopene cyclase C-terminal domain DNK48_RS11165 PF13249 Squalene-hopene cyclase N-terminal domain DNK48_RS11170 PF00348 Polyprenyl synthetase DNK48_RS11175 PF01593 Flavin containing amine oxidoreductase DNK48_RS11190 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS11190 PF13305 Tetracyclin repressor-like, C-terminal domain DNK48_RS11200 PF00005 ABC transporter DNK48_RS11240 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS11245 PF01545 Cation efflux family DNK48_RS11250 PF00293 NUDIX domain DNK48_RS11260 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS11280 PF02028 BCCT, betaine/carnitine/choline family transporter DNK48_RS11290 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DNK48_RS11290 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DNK48_RS11295 PF11838 ERAP1-like C-terminal domain DNK48_RS11295 PF01433 Peptidase family M1 domain DNK48_RS11305 PF02929 Beta galactosidase small chain DNK48_RS11305 PF16353 Domain of unknown function(DUF4981) DNK48_RS11305 PF00703 Glycosyl hydrolases family 2 DNK48_RS11305 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DNK48_RS11305 PF02837 Glycosyl hydrolases family 2, sugar binding domain DNK48_RS11320 PF03466 LysR substrate binding domain DNK48_RS11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS11325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS11325 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS11325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS11330 PF02803 Thiolase, C-terminal domain DNK48_RS11330 PF00108 Thiolase, N-terminal domain DNK48_RS11335 PF02515 CoA-transferase family III DNK48_RS11340 PF07690 Major Facilitator Superfamily DNK48_RS11345 PF00701 Dihydrodipicolinate synthetase family DNK48_RS11355 PF04493 Endonuclease V DNK48_RS11385 PF04686 Streptomyces sporulation and cell division protein, SsgA DNK48_RS11415 PF00171 Aldehyde dehydrogenase family DNK48_RS11420 PF05199 GMC oxidoreductase DNK48_RS11420 PF00732 GMC oxidoreductase DNK48_RS11425 PF00296 Luciferase-like monooxygenase DNK48_RS11430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS11430 PF03466 LysR substrate binding domain DNK48_RS11435 PF03358 NADPH-dependent FMN reductase DNK48_RS11445 PF00296 Luciferase-like monooxygenase DNK48_RS11450 PF00005 ABC transporter DNK48_RS11450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS11455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS11455 PF00005 ABC transporter DNK48_RS11460 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS11460 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS11465 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS11485 PF05121 Gas vesicle protein K DNK48_RS11485 PF00741 Gas vesicle protein DNK48_RS11490 PF00741 Gas vesicle protein DNK48_RS11500 PF00741 Gas vesicle protein DNK48_RS11515 PF00741 Gas vesicle protein DNK48_RS11525 PF02702 Osmosensitive K+ channel His kinase sensor domain DNK48_RS11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS11525 PF13493 Domain of unknown function (DUF4118) DNK48_RS11525 PF00582 Universal stress protein family DNK48_RS11525 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS11535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DNK48_RS11535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DNK48_RS11550 PF03814 Potassium-transporting ATPase A subunit DNK48_RS11560 PF02669 K+-transporting ATPase, c chain DNK48_RS11575 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS11590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DNK48_RS11590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DNK48_RS11595 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DNK48_RS11595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNK48_RS11600 PF02780 Transketolase, C-terminal domain DNK48_RS11600 PF02779 Transketolase, pyrimidine binding domain DNK48_RS11600 PF00456 Transketolase, thiamine diphosphate binding domain DNK48_RS11615 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS11620 PF03466 LysR substrate binding domain DNK48_RS11625 PF00892 EamA-like transporter family DNK48_RS11640 PF08940 Domain of unknown function (DUF1918) DNK48_RS11645 PF01769 Divalent cation transporter DNK48_RS11645 PF00571 CBS domain DNK48_RS11645 PF03448 MgtE intracellular N domain DNK48_RS11665 PF03633 Glycosyl hydrolase family 65, C-terminal domain DNK48_RS11665 PF03632 Glycosyl hydrolase family 65 central catalytic domain DNK48_RS11665 PF03636 Glycosyl hydrolase family 65, N-terminal domain DNK48_RS11680 PF00083 Sugar (and other) transporter DNK48_RS11685 PF10415 Fumarase C C-terminus DNK48_RS11685 PF00206 Lyase DNK48_RS11690 PF09339 IclR helix-turn-helix domain DNK48_RS11690 PF01614 Bacterial transcriptional regulator DNK48_RS11695 PF01047 MarR family DNK48_RS11700 PF00892 EamA-like transporter family DNK48_RS11705 PF00732 GMC oxidoreductase DNK48_RS11705 PF05199 GMC oxidoreductase DNK48_RS11715 PF00561 alpha/beta hydrolase fold DNK48_RS11715 PF00364 Biotin-requiring enzyme DNK48_RS11720 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS11730 PF00206 Lyase DNK48_RS11730 PF10397 Adenylosuccinate lyase C-terminus DNK48_RS11735 PF00171 Aldehyde dehydrogenase family DNK48_RS11740 PF01965 DJ-1/PfpI family DNK48_RS11765 PF00171 Aldehyde dehydrogenase family DNK48_RS11775 PF00296 Luciferase-like monooxygenase DNK48_RS11780 PF07702 UTRA domain DNK48_RS11780 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS11785 PF03992 Antibiotic biosynthesis monooxygenase DNK48_RS11790 PF07690 Major Facilitator Superfamily DNK48_RS11795 PF04055 Radical SAM superfamily DNK48_RS11800 PF01983 Guanylyl transferase CofC like DNK48_RS11835 PF00171 Aldehyde dehydrogenase family DNK48_RS11840 PF00549 CoA-ligase DNK48_RS11840 PF02629 CoA binding domain DNK48_RS11845 PF00549 CoA-ligase DNK48_RS11845 PF08442 ATP-grasp domain DNK48_RS11850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS11850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS11850 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS11855 PF02515 CoA-transferase family III DNK48_RS11860 PF13380 CoA binding domain DNK48_RS11860 PF13607 Succinyl-CoA ligase like flavodoxin domain DNK48_RS11920 PF00457 Glycosyl hydrolases family 11 DNK48_RS11920 PF03422 Carbohydrate binding module (family 6) DNK48_RS11930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS11930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS11935 PF13407 Periplasmic binding protein domain DNK48_RS11940 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS11945 PF00005 ABC transporter DNK48_RS11950 PF00480 ROK family DNK48_RS11960 PF07729 FCD domain DNK48_RS11960 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS11970 PF08546 Ketopantoate reductase PanE/ApbA C terminal DNK48_RS11970 PF02558 Ketopantoate reductase PanE/ApbA DNK48_RS11975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNK48_RS11975 PF00384 Molybdopterin oxidoreductase DNK48_RS11975 PF01568 Molydopterin dinucleotide binding domain DNK48_RS11980 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DNK48_RS11980 PF10531 SLBB domain DNK48_RS11980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DNK48_RS11985 PF02906 Iron only hydrogenase large subunit, C-terminal domain DNK48_RS11985 PF00037 4Fe-4S binding domain DNK48_RS11985 PF02256 Iron hydrogenase small subunit DNK48_RS11985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DNK48_RS11990 PF02634 FdhD/NarQ family DNK48_RS11995 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS12000 PF07690 Major Facilitator Superfamily DNK48_RS12010 PF00144 Beta-lactamase DNK48_RS12015 PF09278 MerR, DNA binding DNK48_RS12015 PF00376 MerR family regulatory protein DNK48_RS12030 PF13593 SBF-like CPA transporter family (DUF4137) DNK48_RS12035 PF03466 LysR substrate binding domain DNK48_RS12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS12040 PF00501 AMP-binding enzyme DNK48_RS12055 PF00248 Aldo/keto reductase family DNK48_RS12060 PF02983 Alpha-lytic protease prodomain DNK48_RS12065 PF04542 Sigma-70 region 2 DNK48_RS12065 PF04545 Sigma-70, region 4 DNK48_RS12070 PF10099 Anti-sigma-K factor rskA DNK48_RS12075 PF00875 DNA photolyase DNK48_RS12075 PF03441 FAD binding domain of DNA photolyase DNK48_RS12080 PF01329 Pterin 4 alpha carbinolamine dehydratase DNK48_RS12105 PF13593 SBF-like CPA transporter family (DUF4137) DNK48_RS12120 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS12125 PF00005 ABC transporter DNK48_RS12130 PF13407 Periplasmic binding protein domain DNK48_RS12150 PF01494 FAD binding domain DNK48_RS12155 PF00561 alpha/beta hydrolase fold DNK48_RS12170 PF12706 Beta-lactamase superfamily domain DNK48_RS12180 PF01494 FAD binding domain DNK48_RS12185 PF04486 SchA/CurD like domain DNK48_RS12190 PF07883 Cupin domain DNK48_RS12195 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS12195 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS12200 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS12200 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS12205 PF00550 Phosphopantetheine attachment site DNK48_RS12210 PF03364 Polyketide cyclase / dehydrase and lipid transport DNK48_RS12215 PF04673 Polyketide synthesis cyclase DNK48_RS12230 PF00891 O-methyltransferase domain DNK48_RS12240 PF12706 Beta-lactamase superfamily domain DNK48_RS12265 PF00296 Luciferase-like monooxygenase DNK48_RS12270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS12270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS12270 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS12275 PF01965 DJ-1/PfpI family DNK48_RS12280 PF00199 Catalase DNK48_RS12280 PF06628 Catalase-related immune-responsive DNK48_RS12280 PF18011 C-terminal domain found in long catalases DNK48_RS12285 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain DNK48_RS12305 PF01743 Poly A polymerase head domain DNK48_RS12305 PF00571 CBS domain DNK48_RS12350 PF01546 Peptidase family M20/M25/M40 DNK48_RS12350 PF07687 Peptidase dimerisation domain DNK48_RS12355 PF04951 D-aminopeptidase DNK48_RS12365 PF13466 STAS domain DNK48_RS12365 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS12365 PF08448 PAS fold DNK48_RS12365 PF13581 Histidine kinase-like ATPase domain DNK48_RS12370 PF07690 Major Facilitator Superfamily DNK48_RS12380 PF04055 Radical SAM superfamily DNK48_RS12390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS12390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS12395 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS12395 PF17754 MftR C-terminal domain DNK48_RS12400 PF00107 Zinc-binding dehydrogenase DNK48_RS12400 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS12405 PF01642 Methylmalonyl-CoA mutase DNK48_RS12405 PF02310 B12 binding domain DNK48_RS12410 PF03328 HpcH/HpaI aldolase/citrate lyase family DNK48_RS12420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS12420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS12420 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS12425 PF02666 Phosphatidylserine decarboxylase DNK48_RS12435 PF02595 Glycerate kinase family DNK48_RS12460 PF02146 Sir2 family DNK48_RS12465 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DNK48_RS12465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DNK48_RS12475 PF06029 AlkA N-terminal domain DNK48_RS12475 PF12833 Helix-turn-helix domain DNK48_RS12475 PF00730 HhH-GPD superfamily base excision DNA repair protein DNK48_RS12475 PF02805 Metal binding domain of Ada DNK48_RS12505 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DNK48_RS12505 PF03900 Porphobilinogen deaminase, C-terminal domain DNK48_RS12515 PF00459 Inositol monophosphatase family DNK48_RS12520 PF07690 Major Facilitator Superfamily DNK48_RS12525 PF00891 O-methyltransferase domain DNK48_RS12535 PF01979 Amidohydrolase family DNK48_RS12540 PF00202 Aminotransferase class-III DNK48_RS12560 PF07690 Major Facilitator Superfamily DNK48_RS12565 PF00857 Isochorismatase family DNK48_RS12585 PF13732 Domain of unknown function (DUF4162) DNK48_RS12585 PF00005 ABC transporter DNK48_RS12590 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS12605 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS12610 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS12615 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS12620 PF00005 ABC transporter DNK48_RS12645 PF02627 Carboxymuconolactone decarboxylase family DNK48_RS12655 PF00480 ROK family DNK48_RS12660 PF00005 ABC transporter DNK48_RS12665 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS12675 PF07702 UTRA domain DNK48_RS12675 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS12695 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS12700 PF01081 KDPG and KHG aldolase DNK48_RS12705 PF00294 pfkB family carbohydrate kinase DNK48_RS12710 PF00545 ribonuclease DNK48_RS12740 PF01872 RibD C-terminal domain DNK48_RS12745 PF03561 Allantoicase repeat DNK48_RS12750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DNK48_RS12755 PF09339 IclR helix-turn-helix domain DNK48_RS12755 PF01614 Bacterial transcriptional regulator DNK48_RS12765 PF12804 MobA-like NTP transferase domain DNK48_RS12765 PF14602 Hexapeptide repeat of succinyl-transferase DNK48_RS12765 PF00132 Bacterial transferase hexapeptide (six repeats) DNK48_RS12770 PF01274 Malate synthase DNK48_RS12775 PF01979 Amidohydrolase family DNK48_RS12780 PF01014 Uricase DNK48_RS12785 PF00576 HIUase/Transthyretin family DNK48_RS12810 PF00501 AMP-binding enzyme DNK48_RS12810 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS12815 PF00501 AMP-binding enzyme DNK48_RS12815 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS12820 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS12820 PF13185 GAF domain DNK48_RS12825 PF01544 CorA-like Mg2+ transporter protein DNK48_RS12830 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DNK48_RS12835 PF00553 Cellulose binding domain DNK48_RS12835 PF01341 Glycosyl hydrolases family 6 DNK48_RS12835 PF00553 Cellulose binding domain DNK48_RS12835 PF01341 Glycosyl hydrolases family 6 DNK48_RS12845 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS12845 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS12860 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS12860 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS12865 PF17853 GGDEF-like domain DNK48_RS12865 PF13556 PucR C-terminal helix-turn-helix domain DNK48_RS12875 PF07729 FCD domain DNK48_RS12875 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS12900 PF01048 Phosphorylase superfamily DNK48_RS12910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DNK48_RS12915 PF02502 Ribose/Galactose Isomerase DNK48_RS12930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS12930 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS12930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS12940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNK48_RS12945 PF01243 Pyridoxamine 5'-phosphate oxidase DNK48_RS12950 PF03466 LysR substrate binding domain DNK48_RS12950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS12960 PF03193 RsgA GTPase DNK48_RS12965 PF08659 KR domain DNK48_RS12965 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS12965 PF00698 Acyl transferase domain DNK48_RS12965 PF14765 Polyketide synthase dehydratase DNK48_RS12965 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS12965 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS12965 PF00550 Phosphopantetheine attachment site DNK48_RS12970 PF08659 KR domain DNK48_RS12970 PF00698 Acyl transferase domain DNK48_RS12970 PF00550 Phosphopantetheine attachment site DNK48_RS12970 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS12970 PF14765 Polyketide synthase dehydratase DNK48_RS12970 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS12970 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS13010 PF00975 Thioesterase domain DNK48_RS13015 PF00067 Cytochrome P450 DNK48_RS13040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DNK48_RS13040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DNK48_RS13050 PF01507 Phosphoadenosine phosphosulfate reductase family DNK48_RS13060 PF01507 Phosphoadenosine phosphosulfate reductase family DNK48_RS13065 PF00009 Elongation factor Tu GTP binding domain DNK48_RS13075 PF09084 NMT1/THI5 like DNK48_RS13080 PF00005 ABC transporter DNK48_RS13085 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS13125 PF00082 Subtilase family DNK48_RS13125 PF05922 Peptidase inhibitor I9 DNK48_RS13130 PF03176 MMPL family DNK48_RS13135 PF00398 Ribosomal RNA adenine dimethylase DNK48_RS13145 PF01547 Bacterial extracellular solute-binding protein DNK48_RS13150 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS13155 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS13175 PF00005 ABC transporter DNK48_RS13280 PF00128 Alpha amylase, catalytic domain DNK48_RS13280 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNK48_RS13285 PF00128 Alpha amylase, catalytic domain DNK48_RS13290 PF00553 Cellulose binding domain DNK48_RS13290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNK48_RS13300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNK48_RS13300 PF00128 Alpha amylase, catalytic domain DNK48_RS13305 PF01641 SelR domain DNK48_RS13310 PF08245 Mur ligase middle domain DNK48_RS13310 PF02875 Mur ligase family, glutamate ligase domain DNK48_RS13310 PF01225 Mur ligase family, catalytic domain DNK48_RS13350 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS13355 PF18698 Histidine kinase sensor domain DNK48_RS13355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS13355 PF00989 PAS fold DNK48_RS13355 PF00672 HAMP domain DNK48_RS13355 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS13360 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS13360 PF00072 Response regulator receiver domain DNK48_RS13365 PF00535 Glycosyl transferase family 2 DNK48_RS13415 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS13415 PF00912 Transglycosylase DNK48_RS13420 PF05114 Protein of unknown function (DUF692) DNK48_RS13435 PF00561 alpha/beta hydrolase fold DNK48_RS13440 PF06778 Chlorite dismutase DNK48_RS13445 PF01593 Flavin containing amine oxidoreductase DNK48_RS13450 PF01614 Bacterial transcriptional regulator DNK48_RS13450 PF09339 IclR helix-turn-helix domain DNK48_RS13460 PF01494 FAD binding domain DNK48_RS13470 PF07690 Major Facilitator Superfamily DNK48_RS13475 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS13475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNK48_RS13485 PF01208 Uroporphyrinogen decarboxylase (URO-D) DNK48_RS13505 PF00108 Thiolase, N-terminal domain DNK48_RS13505 PF02803 Thiolase, C-terminal domain DNK48_RS13510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS13510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS13510 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS13525 PF13520 Amino acid permease DNK48_RS13530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DNK48_RS13530 PF02779 Transketolase, pyrimidine binding domain DNK48_RS13530 PF02780 Transketolase, C-terminal domain DNK48_RS13535 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS13540 PF00005 ABC transporter DNK48_RS13545 PF13407 Periplasmic binding protein domain DNK48_RS13550 PF00480 ROK family DNK48_RS13550 PF01325 Iron dependent repressor, N-terminal DNA binding domain DNK48_RS13555 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS13560 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS13565 PF01547 Bacterial extracellular solute-binding protein DNK48_RS13590 PF07971 Glycosyl hydrolase family 92 DNK48_RS13590 PF17678 Glycosyl hydrolase family 92 N-terminal domain DNK48_RS13600 PF00694 Aconitase C-terminal domain DNK48_RS13600 PF00330 Aconitase family (aconitate hydratase) DNK48_RS13605 PF03466 LysR substrate binding domain DNK48_RS13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS13625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNK48_RS13630 PF17801 Alpha galactosidase C-terminal beta sandwich domain DNK48_RS13630 PF16499 Alpha galactosidase A DNK48_RS13640 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS13645 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS13650 PF16875 Glycosyl hydrolase family 36 N-terminal domain DNK48_RS13650 PF16874 Glycosyl hydrolase family 36 C-terminal domain DNK48_RS13665 PF13378 Enolase C-terminal domain-like DNK48_RS13665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS13675 PF01081 KDPG and KHG aldolase DNK48_RS13680 PF08450 SMP-30/Gluconolactonase/LRE-like region DNK48_RS13685 PF00294 pfkB family carbohydrate kinase DNK48_RS13695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DNK48_RS13695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DNK48_RS13725 PF01965 DJ-1/PfpI family DNK48_RS13725 PF12833 Helix-turn-helix domain DNK48_RS13730 PF02574 Homocysteine S-methyltransferase DNK48_RS13760 PF12823 Domain of unknown function (DUF3817) DNK48_RS13760 PF03176 MMPL family DNK48_RS13770 PF12804 MobA-like NTP transferase domain DNK48_RS13770 PF00132 Bacterial transferase hexapeptide (six repeats) DNK48_RS13775 PF04101 Glycosyltransferase family 28 C-terminal domain DNK48_RS13785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNK48_RS13785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNK48_RS13790 PF00501 AMP-binding enzyme DNK48_RS13795 PF03109 ABC1 family DNK48_RS13805 PF13732 Domain of unknown function (DUF4162) DNK48_RS13805 PF00005 ABC transporter DNK48_RS13810 PF01593 Flavin containing amine oxidoreductase DNK48_RS13835 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DNK48_RS13840 PF00067 Cytochrome P450 DNK48_RS13845 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS13845 PF00501 AMP-binding enzyme DNK48_RS13845 PF00975 Thioesterase domain DNK48_RS13845 PF00550 Phosphopantetheine attachment site DNK48_RS13845 PF00668 Condensation domain DNK48_RS13850 PF03621 MbtH-like protein DNK48_RS13855 PF00501 AMP-binding enzyme DNK48_RS13855 PF00975 Thioesterase domain DNK48_RS13855 PF00550 Phosphopantetheine attachment site DNK48_RS13855 PF00668 Condensation domain DNK48_RS13855 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS13860 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS13860 PF00668 Condensation domain DNK48_RS13860 PF00501 AMP-binding enzyme DNK48_RS13860 PF00550 Phosphopantetheine attachment site DNK48_RS13865 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS13865 PF00550 Phosphopantetheine attachment site DNK48_RS13865 PF00501 AMP-binding enzyme DNK48_RS13865 PF00668 Condensation domain DNK48_RS13865 PF00975 Thioesterase domain DNK48_RS13870 PF00501 AMP-binding enzyme DNK48_RS13870 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS13870 PF00550 Phosphopantetheine attachment site DNK48_RS13870 PF00975 Thioesterase domain DNK48_RS13870 PF00668 Condensation domain DNK48_RS13885 PF07977 FabA-like domain DNK48_RS13890 PF07977 FabA-like domain DNK48_RS13895 PF00550 Phosphopantetheine attachment site DNK48_RS13915 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS13915 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS13920 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS13920 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS13925 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS13925 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS13930 PF00550 Phosphopantetheine attachment site DNK48_RS13935 PF00975 Thioesterase domain DNK48_RS13975 PF04715 Anthranilate synthase component I, N terminal region DNK48_RS13975 PF00425 chorismate binding enzyme DNK48_RS13975 PF00117 Glutamine amidotransferase class-I DNK48_RS13985 PF01040 UbiA prenyltransferase family DNK48_RS13990 PF00067 Cytochrome P450 DNK48_RS13995 PF00348 Polyprenyl synthetase DNK48_RS14000 PF00067 Cytochrome P450 DNK48_RS14010 PF08241 Methyltransferase domain DNK48_RS14025 PF02401 LytB protein DNK48_RS14030 PF02780 Transketolase, C-terminal domain DNK48_RS14030 PF02779 Transketolase, pyrimidine binding domain DNK48_RS14030 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DNK48_RS14040 PF01938 TRAM domain DNK48_RS14040 PF05958 tRNA (Uracil-5-)-methyltransferase DNK48_RS14045 PF13520 Amino acid permease DNK48_RS14050 PF00067 Cytochrome P450 DNK48_RS14080 PF02254 TrkA-N domain DNK48_RS14080 PF02080 TrkA-C domain DNK48_RS14085 PF02254 TrkA-N domain DNK48_RS14085 PF02080 TrkA-C domain DNK48_RS14100 PF00072 Response regulator receiver domain DNK48_RS14100 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS14105 PF02702 Osmosensitive K+ channel His kinase sensor domain DNK48_RS14105 PF13493 Domain of unknown function (DUF4118) DNK48_RS14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS14105 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS14105 PF00582 Universal stress protein family DNK48_RS14120 PF00692 dUTPase DNK48_RS14145 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS14145 PF00672 HAMP domain DNK48_RS14150 PF00072 Response regulator receiver domain DNK48_RS14150 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS14155 PF00459 Inositol monophosphatase family DNK48_RS14160 PF00762 Ferrochelatase DNK48_RS14170 PF04030 D-arabinono-1,4-lactone oxidase DNK48_RS14170 PF01565 FAD binding domain DNK48_RS14180 PF11268 Protein of unknown function (DUF3071) DNK48_RS14185 PF00581 Rhodanese-like domain DNK48_RS14195 PF00265 Thymidine kinase DNK48_RS14210 PF00583 Acetyltransferase (GNAT) family DNK48_RS14210 PF13380 CoA binding domain DNK48_RS14210 PF13607 Succinyl-CoA ligase like flavodoxin domain DNK48_RS14215 PF00381 PTS HPr component phosphorylation site DNK48_RS14220 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS14220 PF07729 FCD domain DNK48_RS14235 PF05193 Peptidase M16 inactive domain DNK48_RS14235 PF00675 Insulinase (Peptidase family M16) DNK48_RS14240 PF03989 DNA gyrase C-terminal domain, beta-propeller DNK48_RS14240 PF00521 DNA gyrase/topoisomerase IV, subunit A DNK48_RS14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS14255 PF17203 Single cache domain 3 DNK48_RS14255 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS14255 PF00989 PAS fold DNK48_RS14260 PF12431 Transcriptional regulator DNK48_RS14260 PF00072 Response regulator receiver domain DNK48_RS14265 PF00474 Sodium:solute symporter family DNK48_RS14275 PF00986 DNA gyrase B subunit, carboxyl terminus DNK48_RS14275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS14275 PF01751 Toprim domain DNK48_RS14275 PF00204 DNA gyrase B DNK48_RS14285 PF00089 Trypsin DNK48_RS14290 PF04545 Sigma-70, region 4 DNK48_RS14290 PF00140 Sigma-70 factor, region 1.2 DNK48_RS14290 PF04542 Sigma-70 region 2 DNK48_RS14290 PF04539 Sigma-70 region 3 DNK48_RS14295 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS14295 PF07729 FCD domain DNK48_RS14300 PF09383 NIL domain DNK48_RS14300 PF00005 ABC transporter DNK48_RS14315 PF09382 RQC domain DNK48_RS14315 PF16124 RecQ zinc-binding DNK48_RS14315 PF00270 DEAD/DEAH box helicase DNK48_RS14315 PF00271 Helicase conserved C-terminal domain DNK48_RS14315 PF00570 HRDC domain DNK48_RS14330 PF01351 Ribonuclease HII DNK48_RS14340 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS14345 PF00005 ABC transporter DNK48_RS14360 PF02867 Ribonucleotide reductase, barrel domain DNK48_RS14360 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DNK48_RS14365 PF03477 ATP cone domain DNK48_RS14370 PF00717 Peptidase S24-like DNK48_RS14370 PF01726 LexA DNA binding domain DNK48_RS14375 PF13307 Helicase C-terminal domain DNK48_RS14385 PF06276 Ferric iron reductase FhuF-like transporter DNK48_RS14385 PF04183 IucA / IucC family DNK48_RS14390 PF00202 Aminotransferase class-III DNK48_RS14400 PF16360 GTP-binding GTPase Middle Region DNK48_RS14400 PF13167 GTP-binding GTPase N-terminal DNK48_RS14400 PF01926 50S ribosome-binding GTPase DNK48_RS14410 PF04607 Region found in RelA / SpoT proteins DNK48_RS14410 PF13291 ACT domain DNK48_RS14410 PF02824 TGS domain DNK48_RS14415 PF01678 Diaminopimelate epimerase DNK48_RS14445 PF04055 Radical SAM superfamily DNK48_RS14445 PF00919 Uncharacterized protein family UPF0004 DNK48_RS14450 PF09339 IclR helix-turn-helix domain DNK48_RS14450 PF01614 Bacterial transcriptional regulator DNK48_RS14465 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS14465 PF00672 HAMP domain DNK48_RS14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS14470 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS14470 PF00072 Response regulator receiver domain DNK48_RS14475 PF00005 ABC transporter DNK48_RS14480 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS14480 PF01464 Transglycosylase SLT domain DNK48_RS14485 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS14490 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS14495 PF01494 FAD binding domain DNK48_RS14505 PF00581 Rhodanese-like domain DNK48_RS14510 PF02631 RecX family DNK48_RS14515 PF00154 recA bacterial DNA recombination protein DNK48_RS14545 PF12852 Cupin DNK48_RS14545 PF12833 Helix-turn-helix domain DNK48_RS14550 PF08494 DEAD/H associated DNK48_RS14550 PF00270 DEAD/DEAH box helicase DNK48_RS14550 PF00271 Helicase conserved C-terminal domain DNK48_RS14555 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DNK48_RS14555 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DNK48_RS14575 PF18146 Damage-inducible protein CinA KH domain DNK48_RS14575 PF02464 Competence-damaged protein DNK48_RS14575 PF00994 Probable molybdopterin binding domain DNK48_RS14580 PF01066 CDP-alcohol phosphatidyltransferase DNK48_RS14585 PF04055 Radical SAM superfamily DNK48_RS14585 PF00919 Uncharacterized protein family UPF0004 DNK48_RS14585 PF18693 TRAM domain DNK48_RS14595 PF01580 FtsK/SpoIIIE family DNK48_RS14595 PF17854 FtsK alpha domain DNK48_RS14595 PF09397 Ftsk gamma domain DNK48_RS14600 PF00072 Response regulator receiver domain DNK48_RS14605 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS14605 PF00672 HAMP domain DNK48_RS14605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DNK48_RS14605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS14605 PF01627 Hpt domain DNK48_RS14605 PF00072 Response regulator receiver domain DNK48_RS14610 PF00672 HAMP domain DNK48_RS14610 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS14620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DNK48_RS14645 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DNK48_RS14645 PF12706 Beta-lactamase superfamily domain DNK48_RS14645 PF17770 Ribonuclease J C-terminal domain DNK48_RS14650 PF00701 Dihydrodipicolinate synthetase family DNK48_RS14655 PF02511 Thymidylate synthase complementing protein DNK48_RS14675 PF01113 Dihydrodipicolinate reductase, N-terminus DNK48_RS14675 PF05173 Dihydrodipicolinate reductase, C-terminus DNK48_RS14680 PF00675 Insulinase (Peptidase family M16) DNK48_RS14680 PF05193 Peptidase M16 inactive domain DNK48_RS14685 PF00575 S1 RNA binding domain DNK48_RS14685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DNK48_RS14685 PF01138 3' exoribonuclease family, domain 1 DNK48_RS14685 PF00013 KH domain DNK48_RS14690 PF00312 Ribosomal protein S15 DNK48_RS14695 PF00400 WD domain, G-beta repeat DNK48_RS14695 PF00069 Protein kinase domain DNK48_RS14700 PF13360 PQQ-like domain DNK48_RS14700 PF00069 Protein kinase domain DNK48_RS14710 PF00400 WD domain, G-beta repeat DNK48_RS14710 PF00069 Protein kinase domain DNK48_RS14725 PF01580 FtsK/SpoIIIE family DNK48_RS14745 PF00082 Subtilase family DNK48_RS14745 PF05922 Peptidase inhibitor I9 DNK48_RS14760 PF01580 FtsK/SpoIIIE family DNK48_RS14780 PF00082 Subtilase family DNK48_RS14805 PF00082 Subtilase family DNK48_RS14805 PF05922 Peptidase inhibitor I9 DNK48_RS14810 PF05108 Type VII secretion system ESX-1, transport TM domain B DNK48_RS14830 PF10609 NUBPL iron-transfer P-loop NTPase DNK48_RS14835 PF06574 FAD synthetase DNK48_RS14835 PF01687 Riboflavin kinase DNK48_RS14840 PF09142 tRNA Pseudouridine synthase II, C terminal DNK48_RS14840 PF16198 tRNA pseudouridylate synthase B C-terminal domain DNK48_RS14840 PF01509 TruB family pseudouridylate synthase (N terminal domain) DNK48_RS14845 PF02033 Ribosome-binding factor A DNK48_RS14860 PF04760 Translation initiation factor IF-2, N-terminal region DNK48_RS14860 PF11987 Translation-initiation factor 2 DNK48_RS14860 PF00009 Elongation factor Tu GTP binding domain DNK48_RS14870 PF08529 NusA N-terminal domain DNK48_RS14870 PF13184 NusA-like KH domain DNK48_RS14875 PF17384 RimP C-terminal SH3 domain DNK48_RS14875 PF02576 RimP N-terminal domain DNK48_RS14905 PF03129 Anticodon binding domain DNK48_RS14905 PF04073 Aminoacyl-tRNA editing domain DNK48_RS14905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNK48_RS14920 PF04551 GcpE protein DNK48_RS14925 PF17820 PDZ domain DNK48_RS14925 PF02163 Peptidase family M50 DNK48_RS14930 PF13288 DXP reductoisomerase C-terminal domain DNK48_RS14930 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DNK48_RS14930 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DNK48_RS14935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS14935 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS14935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS14940 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS14960 PF00171 Aldehyde dehydrogenase family DNK48_RS14965 PF17853 GGDEF-like domain DNK48_RS14965 PF13556 PucR C-terminal helix-turn-helix domain DNK48_RS14965 PF07905 Purine catabolism regulatory protein-like family DNK48_RS14975 PF00202 Aminotransferase class-III DNK48_RS14985 PF01266 FAD dependent oxidoreductase DNK48_RS14990 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS14995 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS15000 PF08402 TOBE domain DNK48_RS15000 PF00005 ABC transporter DNK48_RS15010 PF00171 Aldehyde dehydrogenase family DNK48_RS15020 PF00962 Adenosine/AMP deaminase DNK48_RS15025 PF03009 Glycerophosphoryl diester phosphodiesterase family DNK48_RS15035 PF00171 Aldehyde dehydrogenase family DNK48_RS15045 PF00202 Aminotransferase class-III DNK48_RS15055 PF00474 Sodium:solute symporter family DNK48_RS15060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS15060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS15060 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS15065 PF09383 NIL domain DNK48_RS15065 PF00005 ABC transporter DNK48_RS15080 PF00005 ABC transporter DNK48_RS15080 PF08402 TOBE domain DNK48_RS15085 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS15095 PF04055 Radical SAM superfamily DNK48_RS15105 PF01765 Ribosome recycling factor DNK48_RS15110 PF00696 Amino acid kinase family DNK48_RS15115 PF00889 Elongation factor TS DNK48_RS15120 PF00318 Ribosomal protein S2 DNK48_RS15135 PF04542 Sigma-70 region 2 DNK48_RS15135 PF04539 Sigma-70 region 3 DNK48_RS15135 PF04545 Sigma-70, region 4 DNK48_RS15140 PF02481 DNA recombination-mediator protein A DNK48_RS15140 PF17782 DprA winged helix domain DNK48_RS15145 PF13335 Magnesium chelatase, subunit ChlI C-terminal DNK48_RS15145 PF01078 Magnesium chelatase, subunit ChlI DNK48_RS15150 PF02021 Uncharacterised protein family UPF0102 DNK48_RS15155 PF10611 Protein of unknown function (DUF2469) DNK48_RS15160 PF00293 NUDIX domain DNK48_RS15165 PF10502 Signal peptidase, peptidase S26 DNK48_RS15170 PF10502 Signal peptidase, peptidase S26 DNK48_RS15175 PF10502 Signal peptidase, peptidase S26 DNK48_RS15180 PF10502 Signal peptidase, peptidase S26 DNK48_RS15185 PF01245 Ribosomal protein L19 DNK48_RS15190 PF01746 tRNA (Guanine-1)-methyltransferase DNK48_RS15195 PF01782 RimM N-terminal domain DNK48_RS15195 PF05239 PRC-barrel domain DNK48_RS15205 PF00886 Ribosomal protein S16 DNK48_RS15215 PF03129 Anticodon binding domain DNK48_RS15215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNK48_RS15225 PF00448 SRP54-type protein, GTPase domain DNK48_RS15225 PF02881 SRP54-type protein, helical bundle domain DNK48_RS15225 PF02978 Signal peptide binding domain DNK48_RS15230 PF01909 Nucleotidyltransferase domain DNK48_RS15230 PF01966 HD domain DNK48_RS15230 PF08335 GlnD PII-uridylyltransferase DNK48_RS15235 PF00543 Nitrogen regulatory protein P-II DNK48_RS15240 PF00909 Ammonium Transporter Family DNK48_RS15255 PF02881 SRP54-type protein, helical bundle domain DNK48_RS15255 PF00448 SRP54-type protein, GTPase domain DNK48_RS15260 PF00072 Response regulator receiver domain DNK48_RS15260 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS15265 PF07730 Histidine kinase DNK48_RS15265 PF13492 GAF domain DNK48_RS15285 PF00083 Sugar (and other) transporter DNK48_RS15300 PF00708 Acylphosphatase DNK48_RS15305 PF00188 Cysteine-rich secretory protein family DNK48_RS15310 PF01638 HxlR-like helix-turn-helix DNK48_RS15315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DNK48_RS15315 PF06827 Zinc finger found in FPG and IleRS DNK48_RS15315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DNK48_RS15320 PF00035 Double-stranded RNA binding motif DNK48_RS15320 PF14622 Ribonuclease-III-like DNK48_RS15325 PF01783 Ribosomal L32p protein family DNK48_RS15330 PF02620 Large ribosomal RNA subunit accumulation protein YceD DNK48_RS15340 PF01467 Cytidylyltransferase-like DNK48_RS15350 PF00271 Helicase conserved C-terminal domain DNK48_RS15350 PF17191 RecG wedge domain DNK48_RS15350 PF00270 DEAD/DEAH box helicase DNK48_RS15355 PF02734 DAK2 domain DNK48_RS15355 PF13684 Dihydroxyacetone kinase family DNK48_RS15360 PF00830 Ribosomal L28 family DNK48_RS15365 PF08543 Phosphomethylpyrimidine kinase DNK48_RS15370 PF02769 AIR synthase related protein, C-terminal domain DNK48_RS15370 PF00586 AIR synthase related protein, N-terminal domain DNK48_RS15385 PF07478 D-ala D-ala ligase C-terminus DNK48_RS15385 PF01820 D-ala D-ala ligase N-terminus DNK48_RS15390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DNK48_RS15390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DNK48_RS15400 PF01983 Guanylyl transferase CofC like DNK48_RS15405 PF00216 Bacterial DNA-binding protein DNK48_RS15415 PF00694 Aconitase C-terminal domain DNK48_RS15420 PF00330 Aconitase family (aconitate hydratase) DNK48_RS15425 PF09339 IclR helix-turn-helix domain DNK48_RS15425 PF01614 Bacterial transcriptional regulator DNK48_RS15465 PF00749 tRNA synthetases class I (E and Q), catalytic domain DNK48_RS15470 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS15485 PF03259 Roadblock/LC7 domain DNK48_RS15505 PF03259 Roadblock/LC7 domain DNK48_RS15525 PF01039 Carboxyl transferase domain DNK48_RS15530 PF00682 HMGL-like DNK48_RS15530 PF08502 LeuA allosteric (dimerisation) domain DNK48_RS15535 PF01063 Amino-transferase class IV DNK48_RS15540 PF00180 Isocitrate/isopropylmalate dehydrogenase DNK48_RS15545 PF00149 Calcineurin-like phosphoesterase DNK48_RS15545 PF16656 Purple acid Phosphatase, N-terminal domain DNK48_RS15555 PF00171 Aldehyde dehydrogenase family DNK48_RS15560 PF01619 Proline dehydrogenase DNK48_RS15580 PF01341 Glycosyl hydrolases family 6 DNK48_RS15590 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS15590 PF13305 Tetracyclin repressor-like, C-terminal domain DNK48_RS15600 PF07690 Major Facilitator Superfamily DNK48_RS15610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS15610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS15610 PF01842 ACT domain DNK48_RS15615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DNK48_RS15615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DNK48_RS15620 PF10369 Small subunit of acetolactate synthase DNK48_RS15625 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS15625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS15625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS15630 PF03707 Bacterial signalling protein N terminal repeat DNK48_RS15630 PF00990 Diguanylate cyclase, GGDEF domain DNK48_RS15630 PF00563 EAL domain DNK48_RS15635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS15640 PF00248 Aldo/keto reductase family DNK48_RS15645 PF07995 Glucose / Sorbosone dehydrogenase DNK48_RS15650 PF13191 AAA ATPase domain DNK48_RS15650 PF00211 Adenylate and Guanylate cyclase catalytic domain DNK48_RS15660 PF03176 MMPL family DNK48_RS15675 PF02637 GatB domain DNK48_RS15675 PF02934 GatB/GatE catalytic domain DNK48_RS15685 PF01425 Amidase DNK48_RS15690 PF02686 Glu-tRNAGln amidotransferase C subunit DNK48_RS15695 PF00563 EAL domain DNK48_RS15695 PF00990 Diguanylate cyclase, GGDEF domain DNK48_RS15695 PF03707 Bacterial signalling protein N terminal repeat DNK48_RS15700 PF01653 NAD-dependent DNA ligase adenylation domain DNK48_RS15700 PF03120 NAD-dependent DNA ligase OB-fold domain DNK48_RS15700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DNK48_RS15700 PF12826 Helix-hairpin-helix motif DNK48_RS15700 PF00533 BRCA1 C Terminus (BRCT) domain DNK48_RS15720 PF03033 Glycosyltransferase family 28 N-terminal domain DNK48_RS15720 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DNK48_RS15725 PF13411 MerR HTH family regulatory protein DNK48_RS15730 PF13649 Methyltransferase domain DNK48_RS15730 PF08241 Methyltransferase domain DNK48_RS15740 PF00296 Luciferase-like monooxygenase DNK48_RS15755 PF00266 Aminotransferase class-V DNK48_RS15760 PF00561 alpha/beta hydrolase fold DNK48_RS15775 PF03458 UPF0126 domain DNK48_RS15780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS15780 PF00005 ABC transporter DNK48_RS15785 PF00005 ABC transporter DNK48_RS15785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS15790 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS15795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS15800 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS15800 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS15820 PF08669 Glycine cleavage T-protein C-terminal barrel domain DNK48_RS15820 PF01571 Aminomethyltransferase folate-binding domain DNK48_RS15825 PF01597 Glycine cleavage H-protein DNK48_RS15830 PF00464 Serine hydroxymethyltransferase DNK48_RS15835 PF03315 Serine dehydratase beta chain DNK48_RS15835 PF03313 Serine dehydratase alpha chain DNK48_RS15850 PF01047 MarR family DNK48_RS15875 PF00781 Diacylglycerol kinase catalytic domain DNK48_RS15910 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS15920 PF00128 Alpha amylase, catalytic domain DNK48_RS15920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNK48_RS15925 PF00664 ABC transporter transmembrane region DNK48_RS15925 PF00005 ABC transporter DNK48_RS15930 PF00664 ABC transporter transmembrane region DNK48_RS15930 PF00005 ABC transporter DNK48_RS15960 PF03575 Peptidase family S51 DNK48_RS15965 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNK48_RS15965 PF01447 Thermolysin metallopeptidase, catalytic domain DNK48_RS15965 PF01483 Proprotein convertase P-domain DNK48_RS15965 PF07504 Fungalysin/Thermolysin Propeptide Motif DNK48_RS15970 PF01447 Thermolysin metallopeptidase, catalytic domain DNK48_RS15970 PF01483 Proprotein convertase P-domain DNK48_RS15970 PF07504 Fungalysin/Thermolysin Propeptide Motif DNK48_RS15970 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNK48_RS15975 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNK48_RS15975 PF01447 Thermolysin metallopeptidase, catalytic domain DNK48_RS15975 PF01483 Proprotein convertase P-domain DNK48_RS15975 PF07504 Fungalysin/Thermolysin Propeptide Motif DNK48_RS15985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DNK48_RS15995 PF12849 PBP superfamily domain DNK48_RS16005 PF08241 Methyltransferase domain DNK48_RS16010 PF00343 Carbohydrate phosphorylase DNK48_RS16010 PF11897 Protein of unknown function (DUF3417) DNK48_RS16015 PF18370 Rhamnogalacturonan I lyases beta-sheet domain DNK48_RS16020 PF03211 Pectate lyase DNK48_RS16030 PF00082 Subtilase family DNK48_RS16030 PF05922 Peptidase inhibitor I9 DNK48_RS16035 PF11896 Domain of unknown function (DUF3416) DNK48_RS16040 PF00128 Alpha amylase, catalytic domain DNK48_RS16040 PF16657 Maltogenic Amylase, C-terminal domain DNK48_RS16045 PF01636 Phosphotransferase enzyme family DNK48_RS16045 PF18085 Maltokinase N-terminal cap domain DNK48_RS16050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNK48_RS16050 PF00128 Alpha amylase, catalytic domain DNK48_RS16050 PF02806 Alpha amylase, C-terminal all-beta domain DNK48_RS16065 PF00375 Sodium:dicarboxylate symporter family DNK48_RS16070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS16070 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS16070 PF00989 PAS fold DNK48_RS16070 PF17203 Single cache domain 3 DNK48_RS16075 PF00072 Response regulator receiver domain DNK48_RS16085 PF01547 Bacterial extracellular solute-binding protein DNK48_RS16090 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS16100 PF04542 Sigma-70 region 2 DNK48_RS16100 PF08281 Sigma-70, region 4 DNK48_RS16120 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS16125 PF01494 FAD binding domain DNK48_RS16135 PF03551 Transcriptional regulator PadR-like family DNK48_RS16135 PF13847 Methyltransferase domain DNK48_RS16140 PF00535 Glycosyl transferase family 2 DNK48_RS16145 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS16160 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS16180 PF00365 Phosphofructokinase DNK48_RS16185 PF07085 DRTGG domain DNK48_RS16185 PF01515 Phosphate acetyl/butaryl transferase DNK48_RS16190 PF00871 Acetokinase family DNK48_RS16195 PF00224 Pyruvate kinase, barrel domain DNK48_RS16195 PF02887 Pyruvate kinase, alpha/beta domain DNK48_RS16220 PF00085 Thioredoxin DNK48_RS16225 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS16225 PF16859 Tetracyclin repressor-like, C-terminal domain DNK48_RS16230 PF01642 Methylmalonyl-CoA mutase DNK48_RS16230 PF02310 B12 binding domain DNK48_RS16235 PF12823 Domain of unknown function (DUF3817) DNK48_RS16255 PF01910 Thiamine-binding protein DNK48_RS16285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS16285 PF00672 HAMP domain DNK48_RS16285 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS16290 PF00072 Response regulator receiver domain DNK48_RS16290 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS16305 PF00108 Thiolase, N-terminal domain DNK48_RS16305 PF02803 Thiolase, C-terminal domain DNK48_RS16330 PF00005 ABC transporter DNK48_RS16345 PF00296 Luciferase-like monooxygenase DNK48_RS16355 PF01939 Endonuclease NucS DNK48_RS16365 PF00248 Aldo/keto reductase family DNK48_RS16385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS16385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS16390 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS16395 PF00005 ABC transporter DNK48_RS16395 PF13732 Domain of unknown function (DUF4162) DNK48_RS16405 PF01923 Cobalamin adenosyltransferase DNK48_RS16415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS16415 PF07730 Histidine kinase DNK48_RS16415 PF13492 GAF domain DNK48_RS16420 PF00072 Response regulator receiver domain DNK48_RS16420 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS16430 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DNK48_RS16435 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNK48_RS16435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNK48_RS16440 PF00231 ATP synthase DNK48_RS16445 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNK48_RS16445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNK48_RS16445 PF00306 ATP synthase alpha/beta chain, C terminal domain DNK48_RS16450 PF00213 ATP synthase delta (OSCP) subunit DNK48_RS16455 PF00430 ATP synthase B/B' CF(0) DNK48_RS16460 PF00137 ATP synthase subunit C DNK48_RS16465 PF00119 ATP synthase A chain DNK48_RS16475 PF00953 Glycosyl transferase family 4 DNK48_RS16480 PF00464 Serine hydroxymethyltransferase DNK48_RS16485 PF01451 Low molecular weight phosphotyrosine protein phosphatase DNK48_RS16490 PF01300 Telomere recombination DNK48_RS16495 PF17827 PrmC N-terminal domain DNK48_RS16495 PF13649 Methyltransferase domain DNK48_RS16500 PF00472 RF-1 domain DNK48_RS16500 PF03462 PCRF domain DNK48_RS16505 PF01197 Ribosomal protein L31 DNK48_RS16510 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS16515 PF07497 Rho termination factor, RNA-binding domain DNK48_RS16515 PF07498 Rho termination factor, N-terminal domain DNK48_RS16515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNK48_RS16520 PF00288 GHMP kinases N terminal domain DNK48_RS16520 PF08544 GHMP kinases C terminal DNK48_RS16525 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS16530 PF01842 ACT domain DNK48_RS16530 PF00742 Homoserine dehydrogenase DNK48_RS16530 PF03447 Homoserine dehydrogenase, NAD binding domain DNK48_RS16535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DNK48_RS16535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DNK48_RS16540 PF03485 Arginyl tRNA synthetase N terminal domain DNK48_RS16540 PF05746 DALR anticodon binding domain DNK48_RS16540 PF00750 tRNA synthetases class I (R) DNK48_RS16545 PF00072 Response regulator receiver domain DNK48_RS16545 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS16635 PF07669 Eco57I restriction-modification methylase DNK48_RS16680 PF07690 Major Facilitator Superfamily DNK48_RS16690 PF07690 Major Facilitator Superfamily DNK48_RS16695 PF00583 Acetyltransferase (GNAT) family DNK48_RS16705 PF11583 P-aminobenzoate N-oxygenase AurF DNK48_RS16720 PF08239 Bacterial SH3 domain DNK48_RS16720 PF00877 NlpC/P60 family DNK48_RS16720 PF01476 LysM domain DNK48_RS16760 PF01183 Glycosyl hydrolases family 25 DNK48_RS16770 PF05362 Lon protease (S16) C-terminal proteolytic domain DNK48_RS16770 PF02190 ATP-dependent protease La (LON) substrate-binding domain DNK48_RS16770 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS16785 PF00072 Response regulator receiver domain DNK48_RS16785 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS16790 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS16790 PF00672 HAMP domain DNK48_RS16795 PF16078 2-oxoglutarate dehydrogenase N-terminus DNK48_RS16795 PF16870 2-oxoglutarate dehydrogenase C-terminal DNK48_RS16795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNK48_RS16795 PF00676 Dehydrogenase E1 component DNK48_RS16795 PF02779 Transketolase, pyrimidine binding domain DNK48_RS16805 PF13411 MerR HTH family regulatory protein DNK48_RS16820 PF03704 Bacterial transcriptional activator domain DNK48_RS16830 PF00881 Nitroreductase family DNK48_RS16845 PF00501 AMP-binding enzyme DNK48_RS16845 PF08659 KR domain DNK48_RS16845 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS16845 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS16845 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS16845 PF00668 Condensation domain DNK48_RS16845 PF00550 Phosphopantetheine attachment site DNK48_RS16845 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS16845 PF14765 Polyketide synthase dehydratase DNK48_RS16865 PF00107 Zinc-binding dehydrogenase DNK48_RS16865 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS16870 PF00390 Malic enzyme, N-terminal domain DNK48_RS16870 PF03949 Malic enzyme, NAD binding domain DNK48_RS16875 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS16880 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS16885 PF00005 ABC transporter DNK48_RS16905 PF09055 Nickel-containing superoxide dismutase DNK48_RS16920 PF13466 STAS domain DNK48_RS16920 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS16920 PF13581 Histidine kinase-like ATPase domain DNK48_RS16920 PF08448 PAS fold DNK48_RS16930 PF03466 LysR substrate binding domain DNK48_RS16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS16935 PF02031 Streptomyces extracellular neutral proteinase (M7) family DNK48_RS16960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNK48_RS16960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNK48_RS16970 PF12833 Helix-turn-helix domain DNK48_RS16980 PF04960 Glutaminase DNK48_RS16990 PF00999 Sodium/hydrogen exchanger family DNK48_RS17005 PF13581 Histidine kinase-like ATPase domain DNK48_RS17010 PF04545 Sigma-70, region 4 DNK48_RS17010 PF04539 Sigma-70 region 3 DNK48_RS17010 PF04542 Sigma-70 region 2 DNK48_RS17020 PF00781 Diacylglycerol kinase catalytic domain DNK48_RS17025 PF02467 Transcription factor WhiB DNK48_RS17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS17030 PF07568 Histidine kinase DNK48_RS17030 PF12282 Signal transduction histidine kinase DNK48_RS17035 PF01380 SIS domain DNK48_RS17040 PF01915 Glycosyl hydrolase family 3 C-terminal domain DNK48_RS17040 PF00933 Glycosyl hydrolase family 3 N terminal domain DNK48_RS17045 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS17050 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS17055 PF01547 Bacterial extracellular solute-binding protein DNK48_RS17060 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS17060 PF07702 UTRA domain DNK48_RS17070 PF00474 Sodium:solute symporter family DNK48_RS17105 PF01494 FAD binding domain DNK48_RS17140 PF03477 ATP cone domain DNK48_RS17140 PF02867 Ribonucleotide reductase, barrel domain DNK48_RS17140 PF00317 Ribonucleotide reductase, all-alpha domain DNK48_RS17145 PF00268 Ribonucleotide reductase, small chain DNK48_RS17150 PF01327 Polypeptide deformylase DNK48_RS17165 PF01966 HD domain DNK48_RS17170 PF13490 Putative zinc-finger DNK48_RS17175 PF04542 Sigma-70 region 2 DNK48_RS17175 PF08281 Sigma-70, region 4 DNK48_RS17185 PF02586 SOS response associated peptidase (SRAP) DNK48_RS17195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNK48_RS17200 PF03193 RsgA GTPase DNK48_RS17205 PF00893 Small Multidrug Resistance protein DNK48_RS17215 PF00459 Inositol monophosphatase family DNK48_RS17225 PF06628 Catalase-related immune-responsive DNK48_RS17225 PF00199 Catalase DNK48_RS17250 PF03699 Uncharacterised protein family (UPF0182) DNK48_RS17260 PF05362 Lon protease (S16) C-terminal proteolytic domain DNK48_RS17260 PF13180 PDZ domain DNK48_RS17270 PF02391 MoaE protein DNK48_RS17315 PF03109 ABC1 family DNK48_RS17330 PF02467 Transcription factor WhiB DNK48_RS17340 PF00570 HRDC domain DNK48_RS17340 PF13361 UvrD-like helicase C-terminal domain DNK48_RS17340 PF00580 UvrD/REP helicase N-terminal domain DNK48_RS17345 PF00462 Glutaredoxin DNK48_RS17350 PF00293 NUDIX domain DNK48_RS17350 PF09297 NADH pyrophosphatase zinc ribbon domain DNK48_RS17350 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DNK48_RS17355 PF01546 Peptidase family M20/M25/M40 DNK48_RS17360 PF00580 UvrD/REP helicase N-terminal domain DNK48_RS17360 PF13361 UvrD-like helicase C-terminal domain DNK48_RS17365 PF00580 UvrD/REP helicase N-terminal domain DNK48_RS17365 PF13361 UvrD-like helicase C-terminal domain DNK48_RS17380 PF00561 alpha/beta hydrolase fold DNK48_RS17385 PF00561 alpha/beta hydrolase fold DNK48_RS17390 PF00899 ThiF family DNK48_RS17390 PF00581 Rhodanese-like domain DNK48_RS17460 PF01936 NYN domain DNK48_RS17465 PF01914 MarC family integral membrane protein DNK48_RS17470 PF02811 PHP domain DNK48_RS17485 PF01544 CorA-like Mg2+ transporter protein DNK48_RS17515 PF01883 Iron-sulfur cluster assembly protein DNK48_RS17515 PF10609 NUBPL iron-transfer P-loop NTPase DNK48_RS17525 PF02416 mttA/Hcf106 family DNK48_RS17530 PF13180 PDZ domain DNK48_RS17540 PF08281 Sigma-70, region 4 DNK48_RS17540 PF04542 Sigma-70 region 2 DNK48_RS17545 PF01596 O-methyltransferase DNK48_RS17555 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS17560 PF13302 Acetyltransferase (GNAT) domain DNK48_RS17560 PF03352 Methyladenine glycosylase DNK48_RS17560 PF00117 Glutamine amidotransferase class-I DNK48_RS17560 PF00958 GMP synthase C terminal domain DNK48_RS17560 PF13673 Acetyltransferase (GNAT) domain DNK48_RS17570 PF00809 Pterin binding enzyme DNK48_RS17575 PF03641 Possible lysine decarboxylase DNK48_RS17580 PF07687 Peptidase dimerisation domain DNK48_RS17580 PF01546 Peptidase family M20/M25/M40 DNK48_RS17595 PF00155 Aminotransferase class I and II DNK48_RS17600 PF00037 4Fe-4S binding domain DNK48_RS17610 PF13369 Transglutaminase-like superfamily DNK48_RS17615 PF00072 Response regulator receiver domain DNK48_RS17615 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS17620 PF07730 Histidine kinase DNK48_RS17630 PF00005 ABC transporter DNK48_RS17650 PF02585 GlcNAc-PI de-N-acetylase DNK48_RS17660 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DNK48_RS17660 PF00326 Prolyl oligopeptidase family DNK48_RS17670 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS17670 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS17675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS17685 PF00005 ABC transporter DNK48_RS17685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS17690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS17690 PF00005 ABC transporter DNK48_RS17705 PF06441 Epoxide hydrolase N terminus DNK48_RS17710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS17715 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS17720 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS17720 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS17725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS17725 PF00005 ABC transporter DNK48_RS17730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS17730 PF00005 ABC transporter DNK48_RS17760 PF00005 ABC transporter DNK48_RS17760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS17765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS17765 PF00005 ABC transporter DNK48_RS17770 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS17770 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS17780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS17785 PF00009 Elongation factor Tu GTP binding domain DNK48_RS17785 PF00679 Elongation factor G C-terminus DNK48_RS17785 PF03144 Elongation factor Tu domain 2 DNK48_RS17785 PF14492 Elongation Factor G, domain II DNK48_RS17790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS17805 PF00890 FAD binding domain DNK48_RS17805 PF02910 Fumarate reductase flavoprotein C-term DNK48_RS17810 PF13183 4Fe-4S dicluster domain DNK48_RS17810 PF13085 2Fe-2S iron-sulfur cluster binding domain DNK48_RS17820 PF00293 NUDIX domain DNK48_RS17835 PF00155 Aminotransferase class I and II DNK48_RS17835 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS17855 PF07690 Major Facilitator Superfamily DNK48_RS17860 PF00480 ROK family DNK48_RS17865 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DNK48_RS17865 PF00535 Glycosyl transferase family 2 DNK48_RS17880 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS17885 PF00202 Aminotransferase class-III DNK48_RS17905 PF04321 RmlD substrate binding domain DNK48_RS17910 PF00107 Zinc-binding dehydrogenase DNK48_RS17910 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS17915 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS17925 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DNK48_RS17930 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DNK48_RS17945 PF00072 Response regulator receiver domain DNK48_RS17945 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS17950 PF00005 ABC transporter DNK48_RS17950 PF00664 ABC transporter transmembrane region DNK48_RS17965 PF00672 HAMP domain DNK48_RS17965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS17965 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS17990 PF00005 ABC transporter DNK48_RS17990 PF02687 FtsX-like permease family DNK48_RS17990 PF12704 MacB-like periplasmic core domain DNK48_RS18040 PF07690 Major Facilitator Superfamily DNK48_RS18060 PF00561 alpha/beta hydrolase fold DNK48_RS18065 PF07690 Major Facilitator Superfamily DNK48_RS18105 PF00694 Aconitase C-terminal domain DNK48_RS18110 PF00330 Aconitase family (aconitate hydratase) DNK48_RS18120 PF13649 Methyltransferase domain DNK48_RS18125 PF00682 HMGL-like DNK48_RS18125 PF08502 LeuA allosteric (dimerisation) domain DNK48_RS18140 PF01678 Diaminopimelate epimerase DNK48_RS18145 PF01568 Molydopterin dinucleotide binding domain DNK48_RS18145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNK48_RS18145 PF00384 Molybdopterin oxidoreductase DNK48_RS18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS18155 PF03466 LysR substrate binding domain DNK48_RS18170 PF13411 MerR HTH family regulatory protein DNK48_RS18175 PF01230 HIT domain DNK48_RS18180 PF01425 Amidase DNK48_RS18195 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS18195 PF00501 AMP-binding enzyme DNK48_RS18205 PF00326 Prolyl oligopeptidase family DNK48_RS18210 PF00106 short chain dehydrogenase DNK48_RS18235 PF00501 AMP-binding enzyme DNK48_RS18235 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS18240 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS18245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS18245 PF13378 Enolase C-terminal domain-like DNK48_RS18255 PF00596 Class II Aldolase and Adducin N-terminal domain DNK48_RS18265 PF01070 FMN-dependent dehydrogenase DNK48_RS18280 PF12833 Helix-turn-helix domain DNK48_RS18280 PF12852 Cupin DNK48_RS18330 PF04229 GrpB protein DNK48_RS18365 PF00005 ABC transporter DNK48_RS18385 PF01548 Transposase DNK48_RS18385 PF02371 Transposase IS116/IS110/IS902 family DNK48_RS18390 PF06071 Protein of unknown function (DUF933) DNK48_RS18390 PF01926 50S ribosome-binding GTPase DNK48_RS18400 PF00480 ROK family DNK48_RS18405 PF02401 LytB protein DNK48_RS18410 PF02601 Exonuclease VII, large subunit DNK48_RS18410 PF13742 OB-fold nucleic acid binding domain DNK48_RS18415 PF02609 Exonuclease VII small subunit DNK48_RS18420 PF00881 Nitroreductase family DNK48_RS18430 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DNK48_RS18435 PF02467 Transcription factor WhiB DNK48_RS18445 PF05683 Fumarase C-terminus DNK48_RS18445 PF05681 Fumarate hydratase (Fumerase) DNK48_RS18475 PF13847 Methyltransferase domain DNK48_RS18505 PF02839 Carbohydrate binding domain DNK48_RS18515 PF01522 Polysaccharide deacetylase DNK48_RS18520 PF10415 Fumarase C C-terminus DNK48_RS18520 PF00206 Lyase DNK48_RS18540 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS18540 PF17938 Tetracyclin repressor-like, C-terminal domain DNK48_RS18545 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DNK48_RS18545 PF08501 Shikimate dehydrogenase substrate binding domain DNK48_RS18550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS18550 PF01261 Xylose isomerase-like TIM barrel DNK48_RS18570 PF08924 Domain of unknown function (DUF1906) DNK48_RS18570 PF01471 Putative peptidoglycan binding domain DNK48_RS18610 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS18610 PF00912 Transglycosylase DNK48_RS18630 PF00005 ABC transporter DNK48_RS18640 PF03466 LysR substrate binding domain DNK48_RS18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS18645 PF00578 AhpC/TSA family DNK48_RS18650 PF02627 Carboxymuconolactone decarboxylase family DNK48_RS18680 PF11867 Domain of unknown function (DUF3387) DNK48_RS18680 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DNK48_RS18680 PF18766 SWI2/SNF2 ATPase DNK48_RS18690 PF02384 N-6 DNA Methylase DNK48_RS18705 PF01594 AI-2E family transporter DNK48_RS18715 PF13638 PIN domain DNK48_RS18715 PF02562 PhoH-like protein DNK48_RS18720 PF01255 Putative undecaprenyl diphosphate synthase DNK48_RS18735 PF00313 'Cold-shock' DNA-binding domain DNK48_RS18740 PF02040 Arsenical pump membrane protein DNK48_RS18745 PF00691 OmpA family DNK48_RS18770 PF00437 Type II/IV secretion system protein DNK48_RS18795 PF02018 Carbohydrate binding domain DNK48_RS18795 PF00041 Fibronectin type III domain DNK48_RS18795 PF00704 Glycosyl hydrolases family 18 DNK48_RS18800 PF02018 Carbohydrate binding domain DNK48_RS18800 PF00704 Glycosyl hydrolases family 18 DNK48_RS18800 PF00041 Fibronectin type III domain DNK48_RS18810 PF00246 Zinc carboxypeptidase DNK48_RS18840 PF00270 DEAD/DEAH box helicase DNK48_RS18840 PF00271 Helicase conserved C-terminal domain DNK48_RS18845 PF00313 'Cold-shock' DNA-binding domain DNK48_RS18865 PF00005 ABC transporter DNK48_RS18865 PF13732 Domain of unknown function (DUF4162) DNK48_RS18870 PF02447 GntP family permease DNK48_RS18875 PF01042 Endoribonuclease L-PSP DNK48_RS18880 PF09339 IclR helix-turn-helix domain DNK48_RS18880 PF01614 Bacterial transcriptional regulator DNK48_RS18885 PF00294 pfkB family carbohydrate kinase DNK48_RS18895 PF07969 Amidohydrolase family DNK48_RS18905 PF00698 Acyl transferase domain DNK48_RS18905 PF00107 Zinc-binding dehydrogenase DNK48_RS18905 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS18905 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS18905 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS18905 PF08659 KR domain DNK48_RS18905 PF00550 Phosphopantetheine attachment site DNK48_RS18905 PF14765 Polyketide synthase dehydratase DNK48_RS18905 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS18925 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS18925 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS18930 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS18935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS18940 PF00155 Aminotransferase class I and II DNK48_RS18950 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DNK48_RS18950 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DNK48_RS18955 PF03006 Haemolysin-III related DNK48_RS18965 PF03190 Protein of unknown function, DUF255 DNK48_RS18970 PF03704 Bacterial transcriptional activator domain DNK48_RS18970 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS18970 PF00931 NB-ARC domain DNK48_RS18980 PF02585 GlcNAc-PI de-N-acetylase DNK48_RS18990 PF01272 Transcription elongation factor, GreA/GreB, C-term DNK48_RS18990 PF03449 Transcription elongation factor, N-terminal DNK48_RS18995 PF01061 ABC-2 type transporter DNK48_RS19000 PF00005 ABC transporter DNK48_RS19000 PF13732 Domain of unknown function (DUF4162) DNK48_RS19005 PF13291 ACT domain DNK48_RS19005 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS19025 PF01053 Cys/Met metabolism PLP-dependent enzyme DNK48_RS19035 PF01625 Peptide methionine sulfoxide reductase DNK48_RS19040 PF04978 Protein of unknown function (DUF664) DNK48_RS19110 PF00067 Cytochrome P450 DNK48_RS19115 PF08241 Methyltransferase domain DNK48_RS19135 PF07729 FCD domain DNK48_RS19135 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS19140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS19145 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS19150 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS19150 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS19160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS19160 PF00005 ABC transporter DNK48_RS19185 PF01850 PIN domain DNK48_RS19200 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term DNK48_RS19200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DNK48_RS19205 PF01261 Xylose isomerase-like TIM barrel DNK48_RS19210 PF00121 Triosephosphate isomerase DNK48_RS19215 PF02502 Ribose/Galactose Isomerase DNK48_RS19220 PF02733 Dak1 domain DNK48_RS19220 PF02734 DAK2 domain DNK48_RS19225 PF07690 Major Facilitator Superfamily DNK48_RS19230 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS19230 PF07729 FCD domain DNK48_RS19240 PF00741 Gas vesicle protein DNK48_RS19245 PF06386 Gas vesicle synthesis protein GvpL/GvpF DNK48_RS19255 PF00741 Gas vesicle protein DNK48_RS19270 PF00741 Gas vesicle protein DNK48_RS19270 PF05121 Gas vesicle protein K DNK48_RS19285 PF12704 MacB-like periplasmic core domain DNK48_RS19285 PF02687 FtsX-like permease family DNK48_RS19290 PF00005 ABC transporter DNK48_RS19295 PF07690 Major Facilitator Superfamily DNK48_RS19330 PF07730 Histidine kinase DNK48_RS19340 PF00132 Bacterial transferase hexapeptide (six repeats) DNK48_RS19340 PF12804 MobA-like NTP transferase domain DNK48_RS19345 PF14572 Phosphoribosyl synthetase-associated domain DNK48_RS19345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DNK48_RS19350 PF01386 Ribosomal L25p family DNK48_RS19350 PF14693 Ribosomal protein TL5, C-terminal domain DNK48_RS19355 PF01195 Peptidyl-tRNA hydrolase DNK48_RS19365 PF00311 Phosphoenolpyruvate carboxylase DNK48_RS19375 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS19375 PF17932 Tetracyclin repressor-like, C-terminal domain DNK48_RS19385 PF13649 Methyltransferase domain DNK48_RS19395 PF00072 Response regulator receiver domain DNK48_RS19395 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS19400 PF08544 GHMP kinases C terminal DNK48_RS19400 PF10509 Galactokinase galactose-binding signature DNK48_RS19400 PF00288 GHMP kinases N terminal domain DNK48_RS19405 PF16363 GDP-mannose 4,6 dehydratase DNK48_RS19410 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DNK48_RS19410 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DNK48_RS19415 PF00474 Sodium:solute symporter family DNK48_RS19425 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS19425 PF00072 Response regulator receiver domain DNK48_RS19435 PF16326 ABC transporter C-terminal domain DNK48_RS19435 PF00005 ABC transporter DNK48_RS19435 PF12848 ABC transporter DNK48_RS19440 PF08544 GHMP kinases C terminal DNK48_RS19440 PF00288 GHMP kinases N terminal domain DNK48_RS19445 PF00398 Ribosomal RNA adenine dimethylase DNK48_RS19450 PF06725 3D domain DNK48_RS19450 PF03990 G5-linked-Ubiquitin-like domain DNK48_RS19450 PF07501 G5 domain DNK48_RS19455 PF01026 TatD related DNase DNK48_RS19470 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DNK48_RS19470 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase DNK48_RS19485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNK48_RS19485 PF04073 Aminoacyl-tRNA editing domain DNK48_RS19485 PF03129 Anticodon binding domain DNK48_RS19515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS19530 PF00005 ABC transporter DNK48_RS19540 PF01891 Cobalt uptake substrate-specific transmembrane region DNK48_RS19540 PF13190 PDGLE domain DNK48_RS19545 PF00561 alpha/beta hydrolase fold DNK48_RS19550 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS19550 PF16859 Tetracyclin repressor-like, C-terminal domain DNK48_RS19555 PF03176 MMPL family DNK48_RS19560 PF16859 Tetracyclin repressor-like, C-terminal domain DNK48_RS19560 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS19565 PF03572 Peptidase family S41 DNK48_RS19565 PF14684 Tricorn protease C1 domain DNK48_RS19565 PF14685 Tricorn protease PDZ domain DNK48_RS19565 PF07676 WD40-like Beta Propeller Repeat DNK48_RS19575 PF00106 short chain dehydrogenase DNK48_RS19580 PF00561 alpha/beta hydrolase fold DNK48_RS19585 PF00743 Flavin-binding monooxygenase-like DNK48_RS19590 PF13411 MerR HTH family regulatory protein DNK48_RS19595 PF03372 Endonuclease/Exonuclease/phosphatase family DNK48_RS19615 PF00210 Ferritin-like domain DNK48_RS19630 PF13302 Acetyltransferase (GNAT) domain DNK48_RS19635 PF00994 Probable molybdopterin binding domain DNK48_RS19640 PF01967 MoaC family DNK48_RS19645 PF00994 Probable molybdopterin binding domain DNK48_RS19645 PF03454 MoeA C-terminal region (domain IV) DNK48_RS19645 PF03453 MoeA N-terminal region (domain I and II) DNK48_RS19650 PF00483 Nucleotidyl transferase DNK48_RS19655 PF01812 5-formyltetrahydrofolate cyclo-ligase family DNK48_RS19660 PF01804 Penicillin amidase DNK48_RS19665 PF03471 Transporter associated domain DNK48_RS19665 PF02080 TrkA-C domain DNK48_RS19665 PF00999 Sodium/hydrogen exchanger family DNK48_RS19675 PF01048 Phosphorylase superfamily DNK48_RS19685 PF01741 Large-conductance mechanosensitive channel, MscL DNK48_RS19695 PF16177 Acetyl-coenzyme A synthetase N-terminus DNK48_RS19695 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS19695 PF00501 AMP-binding enzyme DNK48_RS19700 PF03576 Peptidase family S58 DNK48_RS19710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNK48_RS19710 PF02378 Phosphotransferase system, EIIC DNK48_RS19715 PF00294 pfkB family carbohydrate kinase DNK48_RS19720 PF08220 DeoR-like helix-turn-helix domain DNK48_RS19720 PF00455 DeoR C terminal sensor domain DNK48_RS19730 PF00140 Sigma-70 factor, region 1.2 DNK48_RS19730 PF04542 Sigma-70 region 2 DNK48_RS19730 PF04545 Sigma-70, region 4 DNK48_RS19730 PF04539 Sigma-70 region 3 DNK48_RS19745 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DNK48_RS19750 PF01047 MarR family DNK48_RS19755 PF07690 Major Facilitator Superfamily DNK48_RS19770 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS19780 PF00355 Rieske [2Fe-2S] domain DNK48_RS19795 PF04954 Siderophore-interacting protein DNK48_RS19795 PF08021 Siderophore-interacting FAD-binding domain DNK48_RS19800 PF00282 Pyridoxal-dependent decarboxylase conserved domain DNK48_RS19805 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DNK48_RS19815 PF04183 IucA / IucC family DNK48_RS19815 PF06276 Ferric iron reductase FhuF-like transporter DNK48_RS19825 PF00698 Acyl transferase domain DNK48_RS19825 PF14765 Polyketide synthase dehydratase DNK48_RS19825 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS19825 PF00550 Phosphopantetheine attachment site DNK48_RS19825 PF08659 KR domain DNK48_RS19825 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS19825 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS19825 PF08990 Erythronolide synthase docking DNK48_RS19825 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS19860 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS19870 PF03315 Serine dehydratase beta chain DNK48_RS19870 PF03313 Serine dehydratase alpha chain DNK48_RS19875 PF01979 Amidohydrolase family DNK48_RS19890 PF00106 short chain dehydrogenase DNK48_RS19925 PF00293 NUDIX domain DNK48_RS19930 PF00293 NUDIX domain DNK48_RS19940 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS19955 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS19960 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS19980 PF01022 Bacterial regulatory protein, arsR family DNK48_RS19985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS20005 PF00561 alpha/beta hydrolase fold DNK48_RS20020 PF00069 Protein kinase domain DNK48_RS20030 PF05853 beta-keto acid cleavage enzyme DNK48_RS20035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS20035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS20040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS20040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS20055 PF01022 Bacterial regulatory protein, arsR family DNK48_RS20060 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS20065 PF04679 ATP dependent DNA ligase C terminal region DNK48_RS20065 PF01068 ATP dependent DNA ligase domain DNK48_RS20075 PF02735 Ku70/Ku80 beta-barrel domain DNK48_RS20085 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS20085 PF08362 YcdC-like protein, C-terminal region DNK48_RS20095 PF00009 Elongation factor Tu GTP binding domain DNK48_RS20095 PF00679 Elongation factor G C-terminus DNK48_RS20095 PF03764 Elongation factor G, domain IV DNK48_RS20110 PF16918 Protein kinase G tetratricopeptide repeat DNK48_RS20110 PF16919 Protein kinase G rubredoxin domain DNK48_RS20110 PF00069 Protein kinase domain DNK48_RS20125 PF01547 Bacterial extracellular solute-binding protein DNK48_RS20135 PF00768 D-alanyl-D-alanine carboxypeptidase DNK48_RS20135 PF07943 Penicillin-binding protein 5, C-terminal domain DNK48_RS20170 PF09594 Glycosyltransferase family 87 DNK48_RS20175 PF03747 ADP-ribosylglycohydrolase DNK48_RS20205 PF07969 Amidohydrolase family DNK48_RS20220 PF00296 Luciferase-like monooxygenase DNK48_RS20240 PF03704 Bacterial transcriptional activator domain DNK48_RS20240 PF00931 NB-ARC domain DNK48_RS20240 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS20250 PF00501 AMP-binding enzyme DNK48_RS20250 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS20265 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS20280 PF00069 Protein kinase domain DNK48_RS20280 PF13360 PQQ-like domain DNK48_RS20290 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS20300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS20300 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS20300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS20310 PF01243 Pyridoxamine 5'-phosphate oxidase DNK48_RS20310 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DNK48_RS20330 PF13380 CoA binding domain DNK48_RS20330 PF13607 Succinyl-CoA ligase like flavodoxin domain DNK48_RS20335 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS20340 PF01613 Flavin reductase like domain DNK48_RS20350 PF12833 Helix-turn-helix domain DNK48_RS20350 PF01965 DJ-1/PfpI family DNK48_RS20355 PF00107 Zinc-binding dehydrogenase DNK48_RS20355 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS20360 PF00171 Aldehyde dehydrogenase family DNK48_RS20365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS20365 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS20365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS20385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS20385 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS20385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS20390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS20390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS20390 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS20395 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS20395 PF00501 AMP-binding enzyme DNK48_RS20400 PF01548 Transposase DNK48_RS20400 PF02371 Transposase IS116/IS110/IS902 family DNK48_RS20410 PF00069 Protein kinase domain DNK48_RS20410 PF03793 PASTA domain DNK48_RS20415 PF00144 Beta-lactamase DNK48_RS20420 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DNK48_RS20420 PF01266 FAD dependent oxidoreductase DNK48_RS20425 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DNK48_RS20425 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DNK48_RS20425 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DNK48_RS20450 PF00478 IMP dehydrogenase / GMP reductase domain DNK48_RS20455 PF00571 CBS domain DNK48_RS20455 PF00478 IMP dehydrogenase / GMP reductase domain DNK48_RS20460 PF04542 Sigma-70 region 2 DNK48_RS20460 PF04545 Sigma-70, region 4 DNK48_RS20465 PF00072 Response regulator receiver domain DNK48_RS20465 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS20470 PF02467 Transcription factor WhiB DNK48_RS20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS20475 PF03466 LysR substrate binding domain DNK48_RS20485 PF00106 short chain dehydrogenase DNK48_RS20490 PF00118 TCP-1/cpn60 chaperonin family DNK48_RS20495 PF00166 Chaperonin 10 Kd subunit DNK48_RS20500 PF01522 Polysaccharide deacetylase DNK48_RS20505 PF18096 THUMP domain-like DNK48_RS20530 PF00797 N-acetyltransferase DNK48_RS20550 PF00561 alpha/beta hydrolase fold DNK48_RS20555 PF00931 NB-ARC domain DNK48_RS20555 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS20555 PF03704 Bacterial transcriptional activator domain DNK48_RS20560 PF00248 Aldo/keto reductase family DNK48_RS20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS20565 PF03466 LysR substrate binding domain DNK48_RS20575 PF00814 Glycoprotease family DNK48_RS20585 PF00814 Glycoprotease family DNK48_RS20600 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DNK48_RS20605 PF00561 alpha/beta hydrolase fold DNK48_RS20610 PF01168 Alanine racemase, N-terminal domain DNK48_RS20610 PF00842 Alanine racemase, C-terminal domain DNK48_RS20615 PF01256 Carbohydrate kinase DNK48_RS20615 PF03853 YjeF-related protein N-terminus DNK48_RS20635 PF01648 4'-phosphopantetheinyl transferase superfamily DNK48_RS20640 PF01380 SIS domain DNK48_RS20645 PF00485 Phosphoribulokinase / Uridine kinase family DNK48_RS20655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNK48_RS20655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNK48_RS20655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNK48_RS20655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNK48_RS20660 PF00380 Ribosomal protein S9/S16 DNK48_RS20665 PF00572 Ribosomal protein L13 DNK48_RS20680 PF00534 Glycosyl transferases group 1 DNK48_RS20690 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS20690 PF00672 HAMP domain DNK48_RS20700 PF13581 Histidine kinase-like ATPase domain DNK48_RS20705 PF01740 STAS domain DNK48_RS20710 PF08678 Rsbr N terminal DNK48_RS20710 PF01740 STAS domain DNK48_RS20715 PF01416 tRNA pseudouridine synthase DNK48_RS20720 PF01196 Ribosomal protein L17 DNK48_RS20725 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DNK48_RS20725 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DNK48_RS20725 PF01000 RNA polymerase Rpb3/RpoA insert domain DNK48_RS20730 PF00163 Ribosomal protein S4/S9 N-terminal domain DNK48_RS20730 PF01479 S4 domain DNK48_RS20735 PF00411 Ribosomal protein S11 DNK48_RS20740 PF00416 Ribosomal protein S13/S18 DNK48_RS20745 PF00444 Ribosomal protein L36 DNK48_RS20750 PF01176 Translation initiation factor 1A / IF-1 DNK48_RS20755 PF00557 Metallopeptidase family M24 DNK48_RS20760 PF05191 Adenylate kinase, active site lid DNK48_RS20765 PF00344 SecY translocase DNK48_RS20770 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DNK48_RS20775 PF00327 Ribosomal protein L30p/L7e DNK48_RS20780 PF03719 Ribosomal protein S5, C-terminal domain DNK48_RS20780 PF00333 Ribosomal protein S5, N-terminal domain DNK48_RS20785 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DNK48_RS20790 PF00347 Ribosomal protein L6 DNK48_RS20795 PF00410 Ribosomal protein S8 DNK48_RS20805 PF00253 Ribosomal protein S14p/S29e DNK48_RS20810 PF00281 Ribosomal protein L5 DNK48_RS20810 PF00673 ribosomal L5P family C-terminus DNK48_RS20815 PF00467 KOW motif DNK48_RS20815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DNK48_RS20820 PF00238 Ribosomal protein L14p/L23e DNK48_RS20825 PF00366 Ribosomal protein S17 DNK48_RS20830 PF00831 Ribosomal L29 protein DNK48_RS20835 PF00252 Ribosomal protein L16p/L10e DNK48_RS20840 PF00189 Ribosomal protein S3, C-terminal domain DNK48_RS20840 PF07650 KH domain DNK48_RS20845 PF00237 Ribosomal protein L22p/L17e DNK48_RS20850 PF00203 Ribosomal protein S19 DNK48_RS20855 PF03947 Ribosomal Proteins L2, C-terminal domain DNK48_RS20855 PF00181 Ribosomal Proteins L2, RNA binding domain DNK48_RS20860 PF00276 Ribosomal protein L23 DNK48_RS20865 PF00573 Ribosomal protein L4/L1 family DNK48_RS20870 PF00297 Ribosomal protein L3 DNK48_RS20875 PF00338 Ribosomal protein S10p/S20e DNK48_RS20890 PF00009 Elongation factor Tu GTP binding domain DNK48_RS20890 PF03143 Elongation factor Tu C-terminal domain DNK48_RS20890 PF03144 Elongation factor Tu domain 2 DNK48_RS20895 PF03764 Elongation factor G, domain IV DNK48_RS20895 PF00009 Elongation factor Tu GTP binding domain DNK48_RS20895 PF14492 Elongation Factor G, domain II DNK48_RS20895 PF03144 Elongation factor Tu domain 2 DNK48_RS20895 PF00679 Elongation factor G C-terminus DNK48_RS20900 PF00177 Ribosomal protein S7p/S5e DNK48_RS20905 PF00164 Ribosomal protein S12/S23 DNK48_RS20940 PF04997 RNA polymerase Rpb1, domain 1 DNK48_RS20940 PF04998 RNA polymerase Rpb1, domain 5 DNK48_RS20940 PF05000 RNA polymerase Rpb1, domain 4 DNK48_RS20940 PF04983 RNA polymerase Rpb1, domain 3 DNK48_RS20940 PF00623 RNA polymerase Rpb1, domain 2 DNK48_RS20945 PF04563 RNA polymerase beta subunit DNK48_RS20945 PF04565 RNA polymerase Rpb2, domain 3 DNK48_RS20945 PF10385 RNA polymerase beta subunit external 1 domain DNK48_RS20945 PF00562 RNA polymerase Rpb2, domain 6 DNK48_RS20945 PF04560 RNA polymerase Rpb2, domain 7 DNK48_RS20945 PF04561 RNA polymerase Rpb2, domain 2 DNK48_RS20955 PF00542 Ribosomal protein L7/L12 C-terminal domain DNK48_RS20955 PF16320 Ribosomal protein L7/L12 dimerisation domain DNK48_RS20960 PF00466 Ribosomal protein L10 DNK48_RS20970 PF00687 Ribosomal protein L1p/L10e family DNK48_RS20975 PF00298 Ribosomal protein L11, RNA binding domain DNK48_RS20975 PF03946 Ribosomal protein L11, N-terminal domain DNK48_RS20980 PF02357 Transcription termination factor nusG DNK48_RS20985 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DNK48_RS20995 PF00155 Aminotransferase class I and II DNK48_RS21000 PF00962 Adenosine/AMP deaminase DNK48_RS21005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DNK48_RS21005 PF01565 FAD binding domain DNK48_RS21015 PF13452 N-terminal half of MaoC dehydratase DNK48_RS21020 PF00471 Ribosomal protein L33 DNK48_RS21040 PF13460 NAD(P)H-binding DNK48_RS21055 PF01741 Large-conductance mechanosensitive channel, MscL DNK48_RS21065 PF00230 Major intrinsic protein DNK48_RS21080 PF04461 Protein of unknown function (DUF520) DNK48_RS21085 PF03733 Inner membrane component domain DNK48_RS21095 PF00361 Proton-conducting membrane transporter DNK48_RS21100 PF00361 Proton-conducting membrane transporter DNK48_RS21100 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DNK48_RS21105 PF00361 Proton-conducting membrane transporter DNK48_RS21105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DNK48_RS21105 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DNK48_RS21110 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DNK48_RS21115 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DNK48_RS21120 PF00037 4Fe-4S binding domain DNK48_RS21125 PF00146 NADH dehydrogenase DNK48_RS21135 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DNK48_RS21140 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DNK48_RS21155 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS21155 PF00072 Response regulator receiver domain DNK48_RS21165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS21180 PF05368 NmrA-like family DNK48_RS21190 PF01483 Proprotein convertase P-domain DNK48_RS21190 PF04389 Peptidase family M28 DNK48_RS21200 PF00005 ABC transporter DNK48_RS21210 PF00348 Polyprenyl synthetase DNK48_RS21215 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS21245 PF00361 Proton-conducting membrane transporter DNK48_RS21250 PF00361 Proton-conducting membrane transporter DNK48_RS21250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DNK48_RS21255 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DNK48_RS21260 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DNK48_RS21265 PF12838 4Fe-4S dicluster domain DNK48_RS21270 PF00146 NADH dehydrogenase DNK48_RS21280 PF10531 SLBB domain DNK48_RS21280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DNK48_RS21280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DNK48_RS21290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DNK48_RS21295 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DNK48_RS21300 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DNK48_RS21305 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DNK48_RS21310 PF01476 LysM domain DNK48_RS21310 PF00877 NlpC/P60 family DNK48_RS21310 PF08239 Bacterial SH3 domain DNK48_RS21315 PF00571 CBS domain DNK48_RS21325 PF01494 FAD binding domain DNK48_RS21330 PF01209 ubiE/COQ5 methyltransferase family DNK48_RS21340 PF04055 Radical SAM superfamily DNK48_RS21350 PF00069 Protein kinase domain DNK48_RS21350 PF00400 WD domain, G-beta repeat DNK48_RS21355 PF02621 Menaquinone biosynthesis DNK48_RS21360 PF00313 'Cold-shock' DNA-binding domain DNK48_RS21370 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DNK48_RS21370 PF12833 Helix-turn-helix domain DNK48_RS21380 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS21380 PF08362 YcdC-like protein, C-terminal region DNK48_RS21385 PF01476 LysM domain DNK48_RS21385 PF00756 Putative esterase DNK48_RS21390 PF00893 Small Multidrug Resistance protein DNK48_RS21395 PF00375 Sodium:dicarboxylate symporter family DNK48_RS21410 PF03167 Uracil DNA glycosylase superfamily DNK48_RS21415 PF04055 Radical SAM superfamily DNK48_RS21425 PF02441 Flavoprotein DNK48_RS21430 PF01040 UbiA prenyltransferase family DNK48_RS21435 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DNK48_RS21445 PF01578 Cytochrome C assembly protein DNK48_RS21450 PF05140 ResB-like family DNK48_RS21460 PF08534 Redoxin DNK48_RS21470 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS21475 PF00202 Aminotransferase class-III DNK48_RS21500 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DNK48_RS21510 PF00106 short chain dehydrogenase DNK48_RS21520 PF14759 Reductase C-terminal DNK48_RS21520 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS21525 PF00067 Cytochrome P450 DNK48_RS21530 PF01139 tRNA-splicing ligase RtcB DNK48_RS21550 PF01921 tRNA synthetases class I (K) DNK48_RS21555 PF03485 Arginyl tRNA synthetase N terminal domain DNK48_RS21555 PF05746 DALR anticodon binding domain DNK48_RS21555 PF00750 tRNA synthetases class I (R) DNK48_RS21560 PF00561 alpha/beta hydrolase fold DNK48_RS21570 PF00768 D-alanyl-D-alanine carboxypeptidase DNK48_RS21580 PF00490 Delta-aminolevulinic acid dehydratase DNK48_RS21585 PF14824 Sirohaem biosynthesis protein central DNK48_RS21585 PF10414 Sirohaem synthase dimerisation region DNK48_RS21585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNK48_RS21590 PF03900 Porphobilinogen deaminase, C-terminal domain DNK48_RS21590 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DNK48_RS21595 PF01488 Shikimate / quinate 5-dehydrogenase DNK48_RS21595 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DNK48_RS21595 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DNK48_RS21600 PF02629 CoA binding domain DNK48_RS21600 PF06971 Putative DNA-binding protein N-terminus DNK48_RS21615 PF08281 Sigma-70, region 4 DNK48_RS21615 PF04542 Sigma-70 region 2 DNK48_RS21625 PF01553 Acyltransferase DNK48_RS21630 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS21640 PF12728 Helix-turn-helix domain DNK48_RS21645 PF15698 Phosphatase DNK48_RS21650 PF00850 Histone deacetylase domain DNK48_RS21660 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS21685 PF00579 tRNA synthetases class I (W and Y) DNK48_RS21690 PF14748 Pyrroline-5-carboxylate reductase dimerisation DNK48_RS21690 PF03807 NADP oxidoreductase coenzyme F420-dependent DNK48_RS21710 PF00069 Protein kinase domain DNK48_RS21710 PF00400 WD domain, G-beta repeat DNK48_RS21715 PF00069 Protein kinase domain DNK48_RS21715 PF00400 WD domain, G-beta repeat DNK48_RS21720 PF00920 Dehydratase family DNK48_RS21730 PF01261 Xylose isomerase-like TIM barrel DNK48_RS21735 PF02541 Ppx/GppA phosphatase family DNK48_RS21750 PF18073 Rubredoxin metal binding domain DNK48_RS21755 PF02457 DisA bacterial checkpoint controller nucleotide-binding DNK48_RS21755 PF10635 DisA bacterial checkpoint controller linker region DNK48_RS21755 PF12826 Helix-hairpin-helix motif DNK48_RS21765 PF10576 Iron-sulfur binding domain of endonuclease III DNK48_RS21765 PF00730 HhH-GPD superfamily base excision DNA repair protein DNK48_RS21765 PF00633 Helix-hairpin-helix motif DNK48_RS21770 PF04542 Sigma-70 region 2 DNK48_RS21770 PF08281 Sigma-70, region 4 DNK48_RS21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS21785 PF00672 HAMP domain DNK48_RS21785 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS21790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS21795 PF12833 Helix-turn-helix domain DNK48_RS21800 PF07690 Major Facilitator Superfamily DNK48_RS21805 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS21805 PF08361 MAATS-type transcriptional repressor, C-terminal region DNK48_RS21810 PF04225 Opacity-associated protein A LysM-like domain DNK48_RS21810 PF01551 Peptidase family M23 DNK48_RS21855 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS21855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNK48_RS21860 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DNK48_RS21875 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS21875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS21875 PF00672 HAMP domain DNK48_RS21880 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS21880 PF00072 Response regulator receiver domain DNK48_RS21885 PF13180 PDZ domain DNK48_RS21890 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS21895 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS21905 PF00005 ABC transporter DNK48_RS21905 PF00664 ABC transporter transmembrane region DNK48_RS21910 PF00005 ABC transporter DNK48_RS21910 PF00664 ABC transporter transmembrane region DNK48_RS21930 PF00581 Rhodanese-like domain DNK48_RS21935 PF07210 Protein of unknown function (DUF1416) DNK48_RS21950 PF08768 Domain of unknown function (DUF1794) DNK48_RS21955 PF01475 Ferric uptake regulator family DNK48_RS21960 PF01571 Aminomethyltransferase folate-binding domain DNK48_RS21965 PF02580 D-Tyr-tRNA(Tyr) deacylase DNK48_RS21975 PF17668 Acetyltransferase (GNAT) domain DNK48_RS21975 PF13530 Sterol carrier protein domain DNK48_RS21980 PF09278 MerR, DNA binding DNK48_RS21980 PF00376 MerR family regulatory protein DNK48_RS21995 PF13732 Domain of unknown function (DUF4162) DNK48_RS21995 PF00005 ABC transporter DNK48_RS22015 PF00248 Aldo/keto reductase family DNK48_RS22020 PF08281 Sigma-70, region 4 DNK48_RS22020 PF04542 Sigma-70 region 2 DNK48_RS22030 PF01381 Helix-turn-helix DNK48_RS22050 PF01661 Macro domain DNK48_RS22055 PF00877 NlpC/P60 family DNK48_RS22060 PF12849 PBP superfamily domain DNK48_RS22065 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS22070 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS22075 PF00005 ABC transporter DNK48_RS22080 PF01384 Phosphate transporter family DNK48_RS22090 PF02583 Metal-sensitive transcriptional repressor DNK48_RS22115 PF01569 PAP2 superfamily DNK48_RS22120 PF01464 Transglycosylase SLT domain DNK48_RS22120 PF01551 Peptidase family M23 DNK48_RS22120 PF10145 Phage-related minor tail protein DNK48_RS22180 PF01047 MarR family DNK48_RS22195 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS22220 PF01266 FAD dependent oxidoreductase DNK48_RS22225 PF02390 Putative methyltransferase DNK48_RS22245 PF17964 Bacterial Ig domain DNK48_RS22245 PF03734 L,D-transpeptidase catalytic domain DNK48_RS22250 PF03852 DNA mismatch endonuclease Vsr DNK48_RS22255 PF08676 MutL C terminal dimerisation domain DNK48_RS22255 PF01119 DNA mismatch repair protein, C-terminal domain DNK48_RS22270 PF00145 C-5 cytosine-specific DNA methylase DNK48_RS22275 PF00145 C-5 cytosine-specific DNA methylase DNK48_RS22325 PF00248 Aldo/keto reductase family DNK48_RS22375 PF00270 DEAD/DEAH box helicase DNK48_RS22375 PF00271 Helicase conserved C-terminal domain DNK48_RS22425 PF00293 NUDIX domain DNK48_RS22465 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DNK48_RS22465 PF00271 Helicase conserved C-terminal domain DNK48_RS22465 PF11898 Domain of unknown function (DUF3418) DNK48_RS22465 PF04408 Helicase associated domain (HA2) DNK48_RS22465 PF00270 DEAD/DEAH box helicase DNK48_RS22490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DNK48_RS22490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DNK48_RS22500 PF00586 AIR synthase related protein, N-terminal domain DNK48_RS22500 PF02769 AIR synthase related protein, C-terminal domain DNK48_RS22505 PF00156 Phosphoribosyl transferase domain DNK48_RS22520 PF02769 AIR synthase related protein, C-terminal domain DNK48_RS22520 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DNK48_RS22520 PF00586 AIR synthase related protein, N-terminal domain DNK48_RS22530 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DNK48_RS22550 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS22550 PF00072 Response regulator receiver domain DNK48_RS22560 PF01259 SAICAR synthetase DNK48_RS22580 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DNK48_RS22580 PF02844 Phosphoribosylglycinamide synthetase, N domain DNK48_RS22580 PF02843 Phosphoribosylglycinamide synthetase, C domain DNK48_RS22595 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS22595 PF07729 FCD domain DNK48_RS22620 PF00069 Protein kinase domain DNK48_RS22620 PF13360 PQQ-like domain DNK48_RS22625 PF00709 Adenylosuccinate synthetase DNK48_RS22635 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS22635 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS22635 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS22635 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS22635 PF00698 Acyl transferase domain DNK48_RS22635 PF08659 KR domain DNK48_RS22635 PF00550 Phosphopantetheine attachment site DNK48_RS22635 PF14765 Polyketide synthase dehydratase DNK48_RS22645 PF13732 Domain of unknown function (DUF4162) DNK48_RS22645 PF00005 ABC transporter DNK48_RS22655 PF00067 Cytochrome P450 DNK48_RS22660 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS22660 PF00072 Response regulator receiver domain DNK48_RS22665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS22665 PF05384 Sensor protein DegS DNK48_RS22665 PF07730 Histidine kinase DNK48_RS22675 PF00266 Aminotransferase class-V DNK48_RS22680 PF03301 Tryptophan 2,3-dioxygenase DNK48_RS22690 PF07690 Major Facilitator Superfamily DNK48_RS22695 PF01116 Fructose-bisphosphate aldolase class-II DNK48_RS22700 PF00156 Phosphoribosyl transferase domain DNK48_RS22745 PF00155 Aminotransferase class I and II DNK48_RS22760 PF17871 AAA lid domain DNK48_RS22760 PF02861 Clp amino terminal domain, pathogenicity island component DNK48_RS22760 PF10431 C-terminal, D2-small domain, of ClpB protein DNK48_RS22760 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS22760 PF07724 AAA domain (Cdc48 subfamily) DNK48_RS22770 PF00083 Sugar (and other) transporter DNK48_RS22770 PF08946 Osmosensory transporter coiled coil DNK48_RS22780 PF13411 MerR HTH family regulatory protein DNK48_RS22785 PF00684 DnaJ central domain DNK48_RS22785 PF01556 DnaJ C terminal domain DNK48_RS22785 PF00226 DnaJ domain DNK48_RS22790 PF01025 GrpE DNK48_RS22795 PF00012 Hsp70 protein DNK48_RS22800 PF02754 Cysteine-rich domain DNK48_RS22800 PF02665 Nitrate reductase gamma subunit DNK48_RS22800 PF13183 4Fe-4S dicluster domain DNK48_RS22805 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS22805 PF17203 Single cache domain 3 DNK48_RS22805 PF00989 PAS fold DNK48_RS22805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS22820 PF00156 Phosphoribosyl transferase domain DNK48_RS22825 PF00692 dUTPase DNK48_RS22845 PF17191 RecG wedge domain DNK48_RS22845 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DNK48_RS22845 PF00270 DEAD/DEAH box helicase DNK48_RS22870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS22870 PF03466 LysR substrate binding domain DNK48_RS22875 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS22885 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS22885 PF14759 Reductase C-terminal DNK48_RS22890 PF06902 Divergent 4Fe-4S mono-cluster DNK48_RS22900 PF00561 alpha/beta hydrolase fold DNK48_RS22910 PF01022 Bacterial regulatory protein, arsR family DNK48_RS22915 PF07690 Major Facilitator Superfamily DNK48_RS22925 PF01638 HxlR-like helix-turn-helix DNK48_RS22940 PF00376 MerR family regulatory protein DNK48_RS22940 PF09278 MerR, DNA binding DNK48_RS22955 PF00457 Glycosyl hydrolases family 11 DNK48_RS22975 PF00931 NB-ARC domain DNK48_RS22975 PF03704 Bacterial transcriptional activator domain DNK48_RS22975 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS23005 PF00069 Protein kinase domain DNK48_RS23005 PF13360 PQQ-like domain DNK48_RS23010 PF00571 CBS domain DNK48_RS23010 PF01595 Cyclin M transmembrane N-terminal domain DNK48_RS23025 PF00293 NUDIX domain DNK48_RS23025 PF13344 Haloacid dehalogenase-like hydrolase DNK48_RS23040 PF00107 Zinc-binding dehydrogenase DNK48_RS23040 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS23045 PF13520 Amino acid permease DNK48_RS23050 PF01965 DJ-1/PfpI family DNK48_RS23070 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS23090 PF00005 ABC transporter DNK48_RS23090 PF03459 TOBE domain DNK48_RS23105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS23105 PF03459 TOBE domain DNK48_RS23110 PF00553 Cellulose binding domain DNK48_RS23110 PF01341 Glycosyl hydrolases family 6 DNK48_RS23130 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS23130 PF00672 HAMP domain DNK48_RS23130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS23160 PF00561 alpha/beta hydrolase fold DNK48_RS23170 PF07730 Histidine kinase DNK48_RS23175 PF00072 Response regulator receiver domain DNK48_RS23175 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS23195 PF00067 Cytochrome P450 DNK48_RS23210 PF03259 Roadblock/LC7 domain DNK48_RS23220 PF17203 Single cache domain 3 DNK48_RS23220 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS23220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS23220 PF00989 PAS fold DNK48_RS23230 PF04679 ATP dependent DNA ligase C terminal region DNK48_RS23230 PF01068 ATP dependent DNA ligase domain DNK48_RS23250 PF04679 ATP dependent DNA ligase C terminal region DNK48_RS23250 PF01068 ATP dependent DNA ligase domain DNK48_RS23250 PF13298 DNA polymerase Ligase (LigD) DNK48_RS23265 PF09334 tRNA synthetases class I (M) DNK48_RS23280 PF02938 GAD domain DNK48_RS23280 PF01336 OB-fold nucleic acid binding domain DNK48_RS23280 PF00152 tRNA synthetases class II (D, K and N) DNK48_RS23290 PF04261 Dyp-type peroxidase family DNK48_RS23310 PF02678 Pirin DNK48_RS23310 PF05726 Pirin C-terminal cupin domain DNK48_RS23320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS23320 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS23320 PF12806 Acetyl-CoA dehydrogenase C-terminal like DNK48_RS23320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS23335 PF02127 Aminopeptidase I zinc metalloprotease (M18) DNK48_RS23360 PF17991 Thioredoxin like C-terminal domain DNK48_RS23360 PF02683 Cytochrome C biogenesis protein transmembrane region DNK48_RS23360 PF00578 AhpC/TSA family DNK48_RS23370 PF07690 Major Facilitator Superfamily DNK48_RS23375 PF07729 FCD domain DNK48_RS23375 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS23380 PF00364 Biotin-requiring enzyme DNK48_RS23380 PF02817 e3 binding domain DNK48_RS23380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNK48_RS23385 PF02779 Transketolase, pyrimidine binding domain DNK48_RS23385 PF02780 Transketolase, C-terminal domain DNK48_RS23390 PF00676 Dehydrogenase E1 component DNK48_RS23395 PF00072 Response regulator receiver domain DNK48_RS23395 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS23410 PF03793 PASTA domain DNK48_RS23410 PF00069 Protein kinase domain DNK48_RS23415 PF00069 Protein kinase domain DNK48_RS23415 PF03793 PASTA domain DNK48_RS23420 PF10759 Protein of unknown function (DUF2587) DNK48_RS23430 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS23430 PF14765 Polyketide synthase dehydratase DNK48_RS23430 PF00550 Phosphopantetheine attachment site DNK48_RS23430 PF08659 KR domain DNK48_RS23430 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS23430 PF00698 Acyl transferase domain DNK48_RS23430 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS23430 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS23435 PF02254 TrkA-N domain DNK48_RS23435 PF07885 Ion channel DNK48_RS23440 PF00994 Probable molybdopterin binding domain DNK48_RS23440 PF03454 MoeA C-terminal region (domain IV) DNK48_RS23440 PF03453 MoeA N-terminal region (domain I and II) DNK48_RS23445 PF12804 MobA-like NTP transferase domain DNK48_RS23450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNK48_RS23450 PF00364 Biotin-requiring enzyme DNK48_RS23450 PF02817 e3 binding domain DNK48_RS23455 PF02780 Transketolase, C-terminal domain DNK48_RS23455 PF02779 Transketolase, pyrimidine binding domain DNK48_RS23460 PF00676 Dehydrogenase E1 component DNK48_RS23465 PF01037 Lrp/AsnC ligand binding domain DNK48_RS23465 PF13404 AsnC-type helix-turn-helix domain DNK48_RS23470 PF18665 Tetracyclin repressor-like, C-terminal domain DNK48_RS23470 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS23475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS23475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS23475 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DNK48_RS23500 PF05138 Phenylacetic acid catabolic protein DNK48_RS23505 PF06243 Phenylacetic acid degradation B DNK48_RS23510 PF05138 Phenylacetic acid catabolic protein DNK48_RS23515 PF01883 Iron-sulfur cluster assembly protein DNK48_RS23520 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS23520 PF00175 Oxidoreductase NAD-binding domain DNK48_RS23520 PF00970 Oxidoreductase FAD-binding domain DNK48_RS23530 PF00581 Rhodanese-like domain DNK48_RS23545 PF01638 HxlR-like helix-turn-helix DNK48_RS23550 PF02525 Flavodoxin-like fold DNK48_RS23560 PF00498 FHA domain DNK48_RS23560 PF12401 Protein of unknown function (DUF2662) DNK48_RS23565 PF16697 Inner membrane component of T3SS, cytoplasmic domain DNK48_RS23575 PF01098 Cell cycle protein DNK48_RS23580 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS23585 PF00069 Protein kinase domain DNK48_RS23585 PF03793 PASTA domain DNK48_RS23590 PF04203 Sortase domain DNK48_RS23600 PF00117 Glutamine amidotransferase class-I DNK48_RS23605 PF04203 Sortase domain DNK48_RS23615 PF06781 Cell division protein CrgA DNK48_RS23620 PF01694 Rhomboid family DNK48_RS23625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DNK48_RS23630 PF17258 Family of unknown function (DUF5324) DNK48_RS23635 PF00072 Response regulator receiver domain DNK48_RS23650 PF00069 Protein kinase domain DNK48_RS23670 PF12089 Transmembrane domain of unknown function (DUF3566) DNK48_RS23675 PF03989 DNA gyrase C-terminal domain, beta-propeller DNK48_RS23675 PF00521 DNA gyrase/topoisomerase IV, subunit A DNK48_RS23680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS23680 PF01751 Toprim domain DNK48_RS23680 PF00986 DNA gyrase B subunit, carboxyl terminus DNK48_RS23680 PF00204 DNA gyrase B DNK48_RS23685 PF05258 Dna[CI] antecedent, DciA DNK48_RS23690 PF02463 RecF/RecN/SMC N terminal domain DNK48_RS23695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNK48_RS23695 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DNK48_RS23700 PF02767 DNA polymerase III beta subunit, central domain DNK48_RS23700 PF02768 DNA polymerase III beta subunit, C-terminal domain DNK48_RS23700 PF00712 DNA polymerase III beta subunit, N-terminal domain DNK48_RS23710 PF00308 Bacterial dnaA protein DNK48_RS23710 PF08299 Bacterial dnaA protein helix-turn-helix DNK48_RS23715 PF00468 Ribosomal protein L34 DNK48_RS23720 PF00825 Ribonuclease P DNK48_RS23725 PF01809 Putative membrane protein insertion efficiency factor DNK48_RS23730 PF02096 60Kd inner membrane protein DNK48_RS23740 PF02527 rRNA small subunit methyltransferase G DNK48_RS23745 PF13614 AAA domain DNK48_RS23750 PF02195 ParB-like nuclease domain DNK48_RS23750 PF17762 HTH domain found in ParB protein DNK48_RS23760 PF00085 Thioredoxin DNK48_RS23765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS23775 PF04542 Sigma-70 region 2 DNK48_RS23775 PF08281 Sigma-70, region 4 DNK48_RS23780 PF00069 Protein kinase domain DNK48_RS23780 PF03793 PASTA domain DNK48_RS23785 PF03023 Lipid II flippase MurJ DNK48_RS23795 PF01743 Poly A polymerase head domain DNK48_RS23795 PF12627 Probable RNA and SrmB- binding site of polymerase A DNK48_RS23795 PF13735 tRNA nucleotidyltransferase domain 2 putative DNK48_RS23800 PF07690 Major Facilitator Superfamily DNK48_RS23805 PF01658 Myo-inositol-1-phosphate synthase DNK48_RS23815 PF00912 Transglycosylase DNK48_RS23815 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS23840 PF01250 Ribosomal protein S6 DNK48_RS23845 PF00436 Single-strand binding protein family DNK48_RS23850 PF01084 Ribosomal protein S18 DNK48_RS23855 PF03948 Ribosomal protein L9, C-terminal domain DNK48_RS23855 PF01281 Ribosomal protein L9, N-terminal domain DNK48_RS23865 PF00772 DnaB-like helicase N terminal domain DNK48_RS23865 PF03796 DnaB-like helicase C terminal domain DNK48_RS23875 PF01327 Polypeptide deformylase DNK48_RS23880 PF00085 Thioredoxin DNK48_RS23885 PF09278 MerR, DNA binding DNK48_RS23885 PF00376 MerR family regulatory protein DNK48_RS23890 PF00144 Beta-lactamase DNK48_RS23905 PF01047 MarR family DNK48_RS23920 PF00175 Oxidoreductase NAD-binding domain DNK48_RS23920 PF00970 Oxidoreductase FAD-binding domain DNK48_RS23920 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS23935 PF03466 LysR substrate binding domain DNK48_RS23935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS23940 PF01053 Cys/Met metabolism PLP-dependent enzyme DNK48_RS23945 PF01451 Low molecular weight phosphotyrosine protein phosphatase DNK48_RS23950 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DNK48_RS23955 PF07883 Cupin domain DNK48_RS23960 PF17260 Family of unknown function (DUF5326) DNK48_RS23965 PF04686 Streptomyces sporulation and cell division protein, SsgA DNK48_RS23975 PF01964 Radical SAM ThiC family DNK48_RS23975 PF13667 ThiC-associated domain DNK48_RS23995 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DNK48_RS23995 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS24000 PF00155 Aminotransferase class I and II DNK48_RS24005 PF01654 Cytochrome bd terminal oxidase subunit I DNK48_RS24010 PF02322 Cytochrome bd terminal oxidase subunit II DNK48_RS24020 PF07730 Histidine kinase DNK48_RS24020 PF13185 GAF domain DNK48_RS24020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS24020 PF13492 GAF domain DNK48_RS24035 PF00296 Luciferase-like monooxygenase DNK48_RS24040 PF01435 Peptidase family M48 DNK48_RS24050 PF00005 ABC transporter DNK48_RS24060 PF00005 ABC transporter DNK48_RS24070 PF07690 Major Facilitator Superfamily DNK48_RS24075 PF07729 FCD domain DNK48_RS24075 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS24085 PF07690 Major Facilitator Superfamily DNK48_RS24105 PF02403 Seryl-tRNA synthetase N-terminal domain DNK48_RS24105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNK48_RS24110 PF01842 ACT domain DNK48_RS24110 PF00800 Prephenate dehydratase DNK48_RS24115 PF04261 Dyp-type peroxidase family DNK48_RS24120 PF04234 CopC domain DNK48_RS24130 PF02630 SCO1/SenC DNK48_RS24155 PF02627 Carboxymuconolactone decarboxylase family DNK48_RS24160 PF00557 Metallopeptidase family M24 DNK48_RS24160 PF05195 Aminopeptidase P, N-terminal domain DNK48_RS24175 PF01043 SecA preprotein cross-linking domain DNK48_RS24175 PF02810 SEC-C motif DNK48_RS24175 PF07516 SecA Wing and Scaffold domain DNK48_RS24175 PF07517 SecA DEAD-like domain DNK48_RS24185 PF03009 Glycerophosphoryl diester phosphodiesterase family DNK48_RS24240 PF08281 Sigma-70, region 4 DNK48_RS24240 PF04542 Sigma-70 region 2 DNK48_RS24245 PF00501 AMP-binding enzyme DNK48_RS24245 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS24270 PF01494 FAD binding domain DNK48_RS24310 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS24310 PF00072 Response regulator receiver domain DNK48_RS24315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS24315 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS24315 PF00672 HAMP domain DNK48_RS24325 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase DNK48_RS24330 PF07690 Major Facilitator Superfamily DNK48_RS24345 PF07690 Major Facilitator Superfamily DNK48_RS24350 PF01047 MarR family DNK48_RS24365 PF04545 Sigma-70, region 4 DNK48_RS24365 PF04539 Sigma-70 region 3 DNK48_RS24365 PF04542 Sigma-70 region 2 DNK48_RS24370 PF04542 Sigma-70 region 2 DNK48_RS24370 PF04539 Sigma-70 region 3 DNK48_RS24370 PF04545 Sigma-70, region 4 DNK48_RS24375 PF00365 Phosphofructokinase DNK48_RS24380 PF00582 Universal stress protein family DNK48_RS24395 PF14437 MafB19-like deaminase DNK48_RS24425 PF11066 Protein of unknown function (DUF2867) DNK48_RS24425 PF13460 NAD(P)H-binding DNK48_RS24430 PF00067 Cytochrome P450 DNK48_RS24470 PF03364 Polyketide cyclase / dehydrase and lipid transport DNK48_RS24485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DNK48_RS24485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DNK48_RS24490 PF02687 FtsX-like permease family DNK48_RS24490 PF00005 ABC transporter DNK48_RS24490 PF12704 MacB-like periplasmic core domain DNK48_RS24500 PF00072 Response regulator receiver domain DNK48_RS24500 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS24505 PF07730 Histidine kinase DNK48_RS24505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS24560 PF13344 Haloacid dehalogenase-like hydrolase DNK48_RS24560 PF00293 NUDIX domain DNK48_RS24565 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS24565 PF07702 UTRA domain DNK48_RS24575 PF01580 FtsK/SpoIIIE family DNK48_RS24610 PF12728 Helix-turn-helix domain DNK48_RS24615 PF14659 Phage integrase, N-terminal SAM-like domain DNK48_RS24615 PF00589 Phage integrase family DNK48_RS24640 PF07690 Major Facilitator Superfamily DNK48_RS24655 PF02575 YbaB/EbfC DNA-binding family DNK48_RS24660 PF13662 Toprim domain DNK48_RS24660 PF00633 Helix-hairpin-helix motif DNK48_RS24660 PF02132 RecR protein DNK48_RS24670 PF13840 ACT domain DNK48_RS24670 PF01842 ACT domain DNK48_RS24670 PF00696 Amino acid kinase family DNK48_RS24675 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNK48_RS24675 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNK48_RS24680 PF08281 Sigma-70, region 4 DNK48_RS24680 PF04542 Sigma-70 region 2 DNK48_RS24695 PF00326 Prolyl oligopeptidase family DNK48_RS24705 PF00067 Cytochrome P450 DNK48_RS24725 PF02342 TerD domain DNK48_RS24735 PF02342 TerD domain DNK48_RS24740 PF03459 TOBE domain DNK48_RS24755 PF00149 Calcineurin-like phosphoesterase DNK48_RS24755 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNK48_RS24765 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS24765 PF00912 Transglycosylase DNK48_RS24775 PF02467 Transcription factor WhiB DNK48_RS24780 PF17886 HSP20-like domain found in ArsA DNK48_RS24780 PF02374 Anion-transporting ATPase DNK48_RS24785 PF02374 Anion-transporting ATPase DNK48_RS24805 PF00753 Metallo-beta-lactamase superfamily DNK48_RS24805 PF16123 Hydroxyacylglutathione hydrolase C-terminus DNK48_RS24810 PF13545 Crp-like helix-turn-helix domain DNK48_RS24810 PF00027 Cyclic nucleotide-binding domain DNK48_RS24815 PF10576 Iron-sulfur binding domain of endonuclease III DNK48_RS24815 PF00730 HhH-GPD superfamily base excision DNA repair protein DNK48_RS24815 PF00633 Helix-hairpin-helix motif DNK48_RS24820 PF00293 NUDIX domain DNK48_RS24825 PF02674 Colicin V production protein DNK48_RS24835 PF00561 alpha/beta hydrolase fold DNK48_RS24845 PF06965 Na+/H+ antiporter 1 DNK48_RS24850 PF16177 Acetyl-coenzyme A synthetase N-terminus DNK48_RS24850 PF00501 AMP-binding enzyme DNK48_RS24850 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS24855 PF00484 Carbonic anhydrase DNK48_RS24885 PF00437 Type II/IV secretion system protein DNK48_RS24915 PF01740 STAS domain DNK48_RS24920 PF13581 Histidine kinase-like ATPase domain DNK48_RS24930 PF03030 Inorganic H+ pyrophosphatase DNK48_RS24940 PF17827 PrmC N-terminal domain DNK48_RS24940 PF05175 Methyltransferase small domain DNK48_RS24950 PF01751 Toprim domain DNK48_RS24950 PF01131 DNA topoisomerase DNK48_RS24950 PF13368 Topoisomerase C-terminal repeat DNK48_RS24960 PF12169 DNA polymerase III subunits gamma and tau domain III DNK48_RS24965 PF00561 alpha/beta hydrolase fold DNK48_RS24990 PF00145 C-5 cytosine-specific DNA methylase DNK48_RS24995 PF00970 Oxidoreductase FAD-binding domain DNK48_RS24995 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS25005 PF00355 Rieske [2Fe-2S] domain DNK48_RS25025 PF00890 FAD binding domain DNK48_RS25030 PF00920 Dehydratase family DNK48_RS25035 PF07690 Major Facilitator Superfamily DNK48_RS25040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS25040 PF03466 LysR substrate binding domain DNK48_RS25045 PF00694 Aconitase C-terminal domain DNK48_RS25050 PF00330 Aconitase family (aconitate hydratase) DNK48_RS25055 PF00330 Aconitase family (aconitate hydratase) DNK48_RS25060 PF00694 Aconitase C-terminal domain DNK48_RS25065 PF02423 Ornithine cyclodeaminase/mu-crystallin family DNK48_RS25075 PF01321 Creatinase/Prolidase N-terminal domain DNK48_RS25075 PF00557 Metallopeptidase family M24 DNK48_RS25080 PF07690 Major Facilitator Superfamily DNK48_RS25095 PF01022 Bacterial regulatory protein, arsR family DNK48_RS25105 PF04539 Sigma-70 region 3 DNK48_RS25105 PF04545 Sigma-70, region 4 DNK48_RS25105 PF04542 Sigma-70 region 2 DNK48_RS25120 PF01270 Glycosyl hydrolases family 8 DNK48_RS25125 PF00348 Polyprenyl synthetase DNK48_RS25130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS25130 PF07730 Histidine kinase DNK48_RS25130 PF00672 HAMP domain DNK48_RS25135 PF00072 Response regulator receiver domain DNK48_RS25135 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS25140 PF01569 PAP2 superfamily DNK48_RS25145 PF00072 Response regulator receiver domain DNK48_RS25145 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS25150 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS25150 PF00072 Response regulator receiver domain DNK48_RS25180 PF00082 Subtilase family DNK48_RS25185 PF01341 Glycosyl hydrolases family 6 DNK48_RS25185 PF00553 Cellulose binding domain DNK48_RS25195 PF00150 Cellulase (glycosyl hydrolase family 5) DNK48_RS25200 PF01252 Signal peptidase (SPase) II DNK48_RS25210 PF04542 Sigma-70 region 2 DNK48_RS25210 PF08281 Sigma-70, region 4 DNK48_RS25220 PF04542 Sigma-70 region 2 DNK48_RS25220 PF04545 Sigma-70, region 4 DNK48_RS25230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DNK48_RS25230 PF01612 3'-5' exonuclease DNK48_RS25230 PF01367 5'-3' exonuclease, C-terminal SAM fold DNK48_RS25230 PF00476 DNA polymerase family A DNK48_RS25240 PF02163 Peptidase family M50 DNK48_RS25240 PF00571 CBS domain DNK48_RS25255 PF00171 Aldehyde dehydrogenase family DNK48_RS25260 PF04978 Protein of unknown function (DUF664) DNK48_RS25270 PF13732 Domain of unknown function (DUF4162) DNK48_RS25270 PF00005 ABC transporter DNK48_RS25275 PF01061 ABC-2 type transporter DNK48_RS25285 PF00282 Pyridoxal-dependent decarboxylase conserved domain DNK48_RS25290 PF01810 LysE type translocator DNK48_RS25295 PF13411 MerR HTH family regulatory protein DNK48_RS25295 PF07739 TipAS antibiotic-recognition domain DNK48_RS25300 PF09335 SNARE associated Golgi protein DNK48_RS25310 PF00719 Inorganic pyrophosphatase DNK48_RS25315 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DNK48_RS25330 PF00156 Phosphoribosyl transferase domain DNK48_RS25335 PF01434 Peptidase family M41 DNK48_RS25335 PF06480 FtsH Extracellular DNK48_RS25335 PF17862 AAA+ lid domain DNK48_RS25335 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS25340 PF01227 GTP cyclohydrolase I DNK48_RS25350 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DNK48_RS25355 PF02152 Dihydroneopterin aldolase DNK48_RS25365 PF00809 Pterin binding enzyme DNK48_RS25370 PF00152 tRNA synthetases class II (D, K and N) DNK48_RS25370 PF09924 Uncharacterised conserved protein (DUF2156) DNK48_RS25370 PF01336 OB-fold nucleic acid binding domain DNK48_RS25370 PF16995 Transmembrane region of lysyl-tRNA synthetase DNK48_RS25385 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS25390 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS25405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DNK48_RS25415 PF05384 Sensor protein DegS DNK48_RS25415 PF07730 Histidine kinase DNK48_RS25415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS25420 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS25420 PF00072 Response regulator receiver domain DNK48_RS25425 PF07282 Putative transposase DNA-binding domain DNK48_RS25425 PF12323 Helix-turn-helix domain DNK48_RS25425 PF01385 Probable transposase DNK48_RS25445 PF02569 Pantoate-beta-alanine ligase DNK48_RS25450 PF02910 Fumarate reductase flavoprotein C-term DNK48_RS25450 PF00890 FAD binding domain DNK48_RS25455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DNK48_RS25455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DNK48_RS25460 PF03309 Type III pantothenate kinase DNK48_RS25475 PF00583 Acetyltransferase (GNAT) family DNK48_RS25480 PF11774 Lsr2 DNK48_RS25495 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS25495 PF07724 AAA domain (Cdc48 subfamily) DNK48_RS25495 PF17871 AAA lid domain DNK48_RS25495 PF10431 C-terminal, D2-small domain, of ClpB protein DNK48_RS25495 PF02861 Clp amino terminal domain, pathogenicity island component DNK48_RS25535 PF01638 HxlR-like helix-turn-helix DNK48_RS25540 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS25550 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DNK48_RS25555 PF17936 Bacterial Ig domain DNK48_RS25555 PF02872 5'-nucleotidase, C-terminal domain DNK48_RS25555 PF00149 Calcineurin-like phosphoesterase DNK48_RS25560 PF06250 YhcG PDDEXK nuclease domain DNK48_RS25560 PF17761 DUF1016 N-terminal domain DNK48_RS25565 PF00583 Acetyltransferase (GNAT) family DNK48_RS25575 PF02503 Polyphosphate kinase middle domain DNK48_RS25575 PF13090 Polyphosphate kinase C-terminal domain 2 DNK48_RS25575 PF17941 Polyphosphate kinase C-terminal domain 1 DNK48_RS25575 PF13089 Polyphosphate kinase N-terminal domain DNK48_RS25585 PF00293 NUDIX domain DNK48_RS25585 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS25590 PF00005 ABC transporter DNK48_RS25595 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS25605 PF00795 Carbon-nitrogen hydrolase DNK48_RS25620 PF00248 Aldo/keto reductase family DNK48_RS25640 PF00534 Glycosyl transferases group 1 DNK48_RS25640 PF13439 Glycosyltransferase Family 4 DNK48_RS25645 PF10722 Putative bacterial sensory transduction regulator DNK48_RS25650 PF08548 Peptidase M10 serralysin C terminal DNK48_RS25650 PF12708 Pectate lyase superfamily protein DNK48_RS25650 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DNK48_RS25670 PF07690 Major Facilitator Superfamily DNK48_RS25675 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS25710 PF01022 Bacterial regulatory protein, arsR family DNK48_RS25720 PF07702 UTRA domain DNK48_RS25720 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS25725 PF00535 Glycosyl transferase family 2 DNK48_RS25740 PF12894 Anaphase-promoting complex subunit 4 WD40 domain DNK48_RS25740 PF00400 WD domain, G-beta repeat DNK48_RS25750 PF01895 PhoU domain DNK48_RS25755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS25755 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS25760 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS25760 PF00072 Response regulator receiver domain DNK48_RS25775 PF02559 CarD-like/TRCF domain DNK48_RS25780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DNK48_RS25785 PF02542 YgbB family DNK48_RS25790 PF09190 DALR domain DNK48_RS25790 PF01406 tRNA synthetases class I (C) catalytic domain DNK48_RS25795 PF08032 RNA 2'-O ribose methyltransferase substrate binding DNK48_RS25795 PF00588 SpoU rRNA Methylase family DNK48_RS25805 PF00483 Nucleotidyl transferase DNK48_RS25815 PF00005 ABC transporter DNK48_RS25815 PF17912 MalK OB fold domain DNK48_RS25825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS25825 PF03466 LysR substrate binding domain DNK48_RS25850 PF00107 Zinc-binding dehydrogenase DNK48_RS25850 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS25855 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNK48_RS25855 PF01447 Thermolysin metallopeptidase, catalytic domain DNK48_RS25855 PF01483 Proprotein convertase P-domain DNK48_RS25855 PF07504 Fungalysin/Thermolysin Propeptide Motif DNK48_RS25865 PF00107 Zinc-binding dehydrogenase DNK48_RS25865 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS25870 PF17926 Tetracyclin repressor-like, C-terminal domain DNK48_RS25870 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS25880 PF02342 TerD domain DNK48_RS25885 PF03462 PCRF domain DNK48_RS25885 PF00472 RF-1 domain DNK48_RS25890 PF01613 Flavin reductase like domain DNK48_RS25895 PF00563 EAL domain DNK48_RS25895 PF00990 Diguanylate cyclase, GGDEF domain DNK48_RS25895 PF03707 Bacterial signalling protein N terminal repeat DNK48_RS25910 PF01979 Amidohydrolase family DNK48_RS25915 PF00480 ROK family DNK48_RS25920 PF01547 Bacterial extracellular solute-binding protein DNK48_RS25930 PF02358 Trehalose-phosphatase DNK48_RS25935 PF00982 Glycosyltransferase family 20 DNK48_RS25940 PF00535 Glycosyl transferase family 2 DNK48_RS25945 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS25950 PF02597 ThiS family DNK48_RS25955 PF00313 'Cold-shock' DNA-binding domain DNK48_RS25960 PF00118 TCP-1/cpn60 chaperonin family DNK48_RS25965 PF01380 SIS domain DNK48_RS25970 PF13580 SIS domain DNK48_RS25985 PF00072 Response regulator receiver domain DNK48_RS25985 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS25990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS25990 PF07730 Histidine kinase DNK48_RS25990 PF05231 MASE1 DNK48_RS26000 PF00999 Sodium/hydrogen exchanger family DNK48_RS26005 PF07690 Major Facilitator Superfamily DNK48_RS26030 PF03932 CutC family DNK48_RS26035 PF13538 UvrD-like helicase C-terminal domain DNK48_RS26040 PF00271 Helicase conserved C-terminal domain DNK48_RS26040 PF04851 Type III restriction enzyme, res subunit DNK48_RS26070 PF00005 ABC transporter DNK48_RS26075 PF01032 FecCD transport family DNK48_RS26080 PF01032 FecCD transport family DNK48_RS26095 PF00313 'Cold-shock' DNA-binding domain DNK48_RS26100 PF02621 Menaquinone biosynthesis DNK48_RS26105 PF01048 Phosphorylase superfamily DNK48_RS26115 PF07690 Major Facilitator Superfamily DNK48_RS26145 PF00860 Permease family DNK48_RS26150 PF01047 MarR family DNK48_RS26155 PF05977 Transmembrane secretion effector DNK48_RS26165 PF00248 Aldo/keto reductase family DNK48_RS26180 PF00266 Aminotransferase class-V DNK48_RS26195 PF00561 alpha/beta hydrolase fold DNK48_RS26210 PF04255 Protein of unknown function (DUF433) DNK48_RS26215 PF00144 Beta-lactamase DNK48_RS26245 PF01039 Carboxyl transferase domain DNK48_RS26250 PF02785 Biotin carboxylase C-terminal domain DNK48_RS26250 PF00289 Biotin carboxylase, N-terminal domain DNK48_RS26250 PF00364 Biotin-requiring enzyme DNK48_RS26250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNK48_RS26255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS26255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS26255 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS26275 PF00285 Citrate synthase, C-terminal domain DNK48_RS26280 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DNK48_RS26280 PF01243 Pyridoxamine 5'-phosphate oxidase DNK48_RS26290 PF13580 SIS domain DNK48_RS26295 PF02742 Iron dependent repressor, metal binding and dimerisation domain DNK48_RS26295 PF18357 Diphteria toxin repressor SH3 domain DNK48_RS26295 PF01325 Iron dependent repressor, N-terminal DNA binding domain DNK48_RS26300 PF12697 Alpha/beta hydrolase family DNK48_RS26320 PF01070 FMN-dependent dehydrogenase DNK48_RS26335 PF13732 Domain of unknown function (DUF4162) DNK48_RS26335 PF00005 ABC transporter DNK48_RS26365 PF00551 Formyl transferase DNK48_RS26380 PF01740 STAS domain DNK48_RS26385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS26385 PF05231 MASE1 DNK48_RS26385 PF07730 Histidine kinase DNK48_RS26390 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS26390 PF00072 Response regulator receiver domain DNK48_RS26400 PF00561 alpha/beta hydrolase fold DNK48_RS26410 PF00069 Protein kinase domain DNK48_RS26415 PF00069 Protein kinase domain DNK48_RS26420 PF00171 Aldehyde dehydrogenase family DNK48_RS26425 PF05199 GMC oxidoreductase DNK48_RS26440 PF00958 GMP synthase C terminal domain DNK48_RS26440 PF02540 NAD synthase DNK48_RS26440 PF00117 Glutamine amidotransferase class-I DNK48_RS26450 PF00596 Class II Aldolase and Adducin N-terminal domain DNK48_RS26465 PF00069 Protein kinase domain DNK48_RS26485 PF00072 Response regulator receiver domain DNK48_RS26485 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS26505 PF00742 Homoserine dehydrogenase DNK48_RS26505 PF01842 ACT domain DNK48_RS26505 PF03447 Homoserine dehydrogenase, NAD binding domain DNK48_RS26510 PF00877 NlpC/P60 family DNK48_RS26525 PF00877 NlpC/P60 family DNK48_RS26530 PF00580 UvrD/REP helicase N-terminal domain DNK48_RS26530 PF13361 UvrD-like helicase C-terminal domain DNK48_RS26535 PF04225 Opacity-associated protein A LysM-like domain DNK48_RS26535 PF01551 Peptidase family M23 DNK48_RS26545 PF02310 B12 binding domain DNK48_RS26560 PF07728 AAA domain (dynein-related subfamily) DNK48_RS26585 PF00549 CoA-ligase DNK48_RS26585 PF08442 ATP-grasp domain DNK48_RS26590 PF02629 CoA binding domain DNK48_RS26590 PF00549 CoA-ligase DNK48_RS26605 PF00551 Formyl transferase DNK48_RS26610 PF01808 AICARFT/IMPCHase bienzyme DNK48_RS26610 PF02142 MGS-like domain DNK48_RS26615 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DNK48_RS26615 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DNK48_RS26630 PF00056 lactate/malate dehydrogenase, NAD binding domain DNK48_RS26630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNK48_RS26655 PF00171 Aldehyde dehydrogenase family DNK48_RS26660 PF00732 GMC oxidoreductase DNK48_RS26660 PF05199 GMC oxidoreductase DNK48_RS26665 PF00571 CBS domain DNK48_RS26665 PF00005 ABC transporter DNK48_RS26670 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS26685 PF02627 Carboxymuconolactone decarboxylase family DNK48_RS26690 PF00155 Aminotransferase class I and II DNK48_RS26690 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS26695 PF00202 Aminotransferase class-III DNK48_RS26710 PF00464 Serine hydroxymethyltransferase DNK48_RS26715 PF08281 Sigma-70, region 4 DNK48_RS26715 PF04542 Sigma-70 region 2 DNK48_RS26720 PF00579 tRNA synthetases class I (W and Y) DNK48_RS26730 PF01494 FAD binding domain DNK48_RS26745 PF01494 FAD binding domain DNK48_RS26750 PF03631 Virulence factor BrkB DNK48_RS26755 PF00768 D-alanyl-D-alanine carboxypeptidase DNK48_RS26760 PF00149 Calcineurin-like phosphoesterase DNK48_RS26770 PF13085 2Fe-2S iron-sulfur cluster binding domain DNK48_RS26775 PF02910 Fumarate reductase flavoprotein C-term DNK48_RS26775 PF00890 FAD binding domain DNK48_RS26785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DNK48_RS26795 PF00728 Glycosyl hydrolase family 20, catalytic domain DNK48_RS26795 PF02838 Glycosyl hydrolase family 20, domain 2 DNK48_RS26820 PF01642 Methylmalonyl-CoA mutase DNK48_RS26820 PF02310 B12 binding domain DNK48_RS26840 PF01425 Amidase DNK48_RS26850 PF01522 Polysaccharide deacetylase DNK48_RS26860 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS26865 PF00144 Beta-lactamase DNK48_RS26870 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS26870 PF07729 FCD domain DNK48_RS26880 PF02447 GntP family permease DNK48_RS26890 PF00107 Zinc-binding dehydrogenase DNK48_RS26890 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS26900 PF02515 CoA-transferase family III DNK48_RS26910 PF01757 Acyltransferase family DNK48_RS26920 PF00535 Glycosyl transferase family 2 DNK48_RS26930 PF02348 Cytidylyltransferase DNK48_RS26935 PF08666 SAF domain DNK48_RS26935 PF03102 NeuB family DNK48_RS26945 PF04107 Glutamate-cysteine ligase family 2(GCS2) DNK48_RS26945 PF01546 Peptidase family M20/M25/M40 DNK48_RS26955 PF02608 ABC transporter substrate-binding protein PnrA-like DNK48_RS26960 PF00005 ABC transporter DNK48_RS26965 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS26970 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS26975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNK48_RS26980 PF00591 Glycosyl transferase family, a/b domain DNK48_RS26980 PF02885 Glycosyl transferase family, helical bundle domain DNK48_RS26980 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DNK48_RS26990 PF07690 Major Facilitator Superfamily DNK48_RS27000 PF00962 Adenosine/AMP deaminase DNK48_RS27025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS27025 PF00672 HAMP domain DNK48_RS27025 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS27030 PF00072 Response regulator receiver domain DNK48_RS27030 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS27035 PF08281 Sigma-70, region 4 DNK48_RS27035 PF04542 Sigma-70 region 2 DNK48_RS27045 PF00083 Sugar (and other) transporter DNK48_RS27050 PF04909 Amidohydrolase DNK48_RS27055 PF04909 Amidohydrolase DNK48_RS27060 PF00171 Aldehyde dehydrogenase family DNK48_RS27065 PF00171 Aldehyde dehydrogenase family DNK48_RS27070 PF01791 DeoC/LacD family aldolase DNK48_RS27080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNK48_RS27080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNK48_RS27080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNK48_RS27080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNK48_RS27085 PF01048 Phosphorylase superfamily DNK48_RS27095 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS27095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNK48_RS27105 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS27125 PF02545 Maf-like protein DNK48_RS27135 PF01039 Carboxyl transferase domain DNK48_RS27140 PF03099 Biotin/lipoate A/B protein ligase family DNK48_RS27140 PF02237 Biotin protein ligase C terminal domain DNK48_RS27140 PF08279 HTH domain DNK48_RS27145 PF16701 Adenylate cyclase regulatory domain DNK48_RS27145 PF00211 Adenylate and Guanylate cyclase catalytic domain DNK48_RS27155 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS27160 PF00990 Diguanylate cyclase, GGDEF domain DNK48_RS27165 PF00221 Aromatic amino acid lyase DNK48_RS27185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS27185 PF18029 Glyoxalase-like domain DNK48_RS27205 PF03819 MazG nucleotide pyrophosphohydrolase domain DNK48_RS27215 PF01212 Beta-eliminating lyase DNK48_RS27225 PF00067 Cytochrome P450 DNK48_RS27250 PF00067 Cytochrome P450 DNK48_RS27255 PF06737 Transglycosylase-like domain DNK48_RS27255 PF11574 Protein of unknown function (DUF3235) DNK48_RS27260 PF06737 Transglycosylase-like domain DNK48_RS27265 PF03952 Enolase, N-terminal domain DNK48_RS27265 PF00113 Enolase, C-terminal TIM barrel domain DNK48_RS27280 PF02541 Ppx/GppA phosphatase family DNK48_RS27285 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS27295 PF12704 MacB-like periplasmic core domain DNK48_RS27295 PF02687 FtsX-like permease family DNK48_RS27300 PF00005 ABC transporter DNK48_RS27330 PF02803 Thiolase, C-terminal domain DNK48_RS27330 PF00108 Thiolase, N-terminal domain DNK48_RS27335 PF13472 GDSL-like Lipase/Acylhydrolase family DNK48_RS27340 PF00571 CBS domain DNK48_RS27340 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS27350 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS27350 PF00501 AMP-binding enzyme DNK48_RS27370 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DNK48_RS27380 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS27385 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS27390 PF00571 CBS domain DNK48_RS27390 PF00005 ABC transporter DNK48_RS27410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DNK48_RS27410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DNK48_RS27420 PF00106 short chain dehydrogenase DNK48_RS27425 PF00107 Zinc-binding dehydrogenase DNK48_RS27430 PF01175 Urocanase Rossmann-like domain DNK48_RS27430 PF17391 Urocanase N-terminal domain DNK48_RS27430 PF17392 Urocanase C-terminal domain DNK48_RS27435 PF01546 Peptidase family M20/M25/M40 DNK48_RS27445 PF01979 Amidohydrolase family DNK48_RS27450 PF04542 Sigma-70 region 2 DNK48_RS27450 PF04539 Sigma-70 region 3 DNK48_RS27450 PF04545 Sigma-70, region 4 DNK48_RS27455 PF01740 STAS domain DNK48_RS27485 PF00854 POT family DNK48_RS27490 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS27490 PF00072 Response regulator receiver domain DNK48_RS27495 PF00672 HAMP domain DNK48_RS27495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS27495 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS27505 PF02222 ATP-grasp domain DNK48_RS27505 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DNK48_RS27510 PF00731 AIR carboxylase DNK48_RS27520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DNK48_RS27520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DNK48_RS27520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DNK48_RS27525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS27525 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS27525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS27530 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS27535 PF03061 Thioesterase superfamily DNK48_RS27540 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS27555 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS27560 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS27560 PF13399 LytR cell envelope-related transcriptional attenuator DNK48_RS27580 PF00483 Nucleotidyl transferase DNK48_RS27590 PF01996 F420-0:Gamma-glutamyl ligase DNK48_RS27590 PF00881 Nitroreductase family DNK48_RS27595 PF01933 Uncharacterised protein family UPF0052 DNK48_RS27605 PF02467 Transcription factor WhiB DNK48_RS27610 PF00535 Glycosyl transferase family 2 DNK48_RS27610 PF00534 Glycosyl transferases group 1 DNK48_RS27630 PF02652 L-lactate permease DNK48_RS27635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNK48_RS27635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNK48_RS27635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNK48_RS27635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNK48_RS27640 PF03966 Trm112p-like protein DNK48_RS27650 PF01238 Phosphomannose isomerase type I DNK48_RS27660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNK48_RS27660 PF02378 Phosphotransferase system, EIIC DNK48_RS27660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNK48_RS27665 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DNK48_RS27665 PF05221 S-adenosyl-L-homocysteine hydrolase DNK48_RS27700 PF01008 Initiation factor 2 subunit family DNK48_RS27705 PF00589 Phage integrase family DNK48_RS27705 PF14659 Phage integrase, N-terminal SAM-like domain DNK48_RS27785 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS27785 PF07702 UTRA domain DNK48_RS27795 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS27795 PF00072 Response regulator receiver domain DNK48_RS27800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS27800 PF00672 HAMP domain DNK48_RS27800 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS27805 PF10646 Sporulation and spore germination DNK48_RS27805 PF10647 Lipoprotein LpqB beta-propeller domain DNK48_RS27815 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DNK48_RS27815 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DNK48_RS27820 PF00072 Response regulator receiver domain DNK48_RS27820 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS27825 PF06224 Winged helix DNA-binding domain DNK48_RS27835 PF07516 SecA Wing and Scaffold domain DNK48_RS27835 PF07517 SecA DEAD-like domain DNK48_RS27835 PF01043 SecA preprotein cross-linking domain DNK48_RS27855 PF01965 DJ-1/PfpI family DNK48_RS27860 PF05088 Bacterial NAD-glutamate dehydrogenase DNK48_RS27865 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DNK48_RS27865 PF00535 Glycosyl transferase family 2 DNK48_RS27870 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DNK48_RS27870 PF00535 Glycosyl transferase family 2 DNK48_RS27875 PF00535 Glycosyl transferase family 2 DNK48_RS27895 PF17103 Stealth protein CR4, conserved region 4 DNK48_RS27895 PF11380 Stealth protein CR2, conserved region 2 DNK48_RS27895 PF17102 Stealth protein CR3, conserved region 3 DNK48_RS27895 PF17101 Stealth protein CR1, conserved region 1 DNK48_RS27900 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DNK48_RS27900 PF00535 Glycosyl transferase family 2 DNK48_RS27905 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS27910 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS27915 PF01547 Bacterial extracellular solute-binding protein DNK48_RS27940 PF00069 Protein kinase domain DNK48_RS27950 PF00069 Protein kinase domain DNK48_RS27955 PF03462 PCRF domain DNK48_RS27955 PF00472 RF-1 domain DNK48_RS27970 PF00005 ABC transporter DNK48_RS27975 PF18075 FtsX extracellular domain DNK48_RS27975 PF02687 FtsX-like permease family DNK48_RS27980 PF03572 Peptidase family S41 DNK48_RS27980 PF13180 PDZ domain DNK48_RS27985 PF01668 SmpB protein DNK48_RS28020 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS28020 PF00107 Zinc-binding dehydrogenase DNK48_RS28035 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DNK48_RS28040 PF13802 Galactose mutarotase-like DNK48_RS28040 PF01055 Glycosyl hydrolases family 31 DNK48_RS28045 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS28050 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS28060 PF03466 LysR substrate binding domain DNK48_RS28060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS28065 PF00561 alpha/beta hydrolase fold DNK48_RS28070 PF03466 LysR substrate binding domain DNK48_RS28070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS28085 PF07690 Major Facilitator Superfamily DNK48_RS28100 PF04545 Sigma-70, region 4 DNK48_RS28100 PF04542 Sigma-70 region 2 DNK48_RS28110 PF13538 UvrD-like helicase C-terminal domain DNK48_RS28115 PF00313 'Cold-shock' DNA-binding domain DNK48_RS28120 PF03949 Malic enzyme, NAD binding domain DNK48_RS28120 PF00390 Malic enzyme, N-terminal domain DNK48_RS28130 PF00216 Bacterial DNA-binding protein DNK48_RS28135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNK48_RS28140 PF02622 Uncharacterized ACR, COG1678 DNK48_RS28160 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS28165 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS28170 PF07691 PA14 domain DNK48_RS28170 PF02838 Glycosyl hydrolase family 20, domain 2 DNK48_RS28170 PF00728 Glycosyl hydrolase family 20, catalytic domain DNK48_RS28175 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS28175 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS28190 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS28190 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS28195 PF01522 Polysaccharide deacetylase DNK48_RS28205 PF00550 Phosphopantetheine attachment site DNK48_RS28205 PF00501 AMP-binding enzyme DNK48_RS28205 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS28205 PF00975 Thioesterase domain DNK48_RS28205 PF00668 Condensation domain DNK48_RS28210 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS28215 PF07702 UTRA domain DNK48_RS28215 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS28285 PF12728 Helix-turn-helix domain DNK48_RS28290 PF14659 Phage integrase, N-terminal SAM-like domain DNK48_RS28290 PF00589 Phage integrase family DNK48_RS28310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS28310 PF03466 LysR substrate binding domain DNK48_RS28320 PF03601 Conserved hypothetical protein 698 DNK48_RS28335 PF02661 Fic/DOC family DNK48_RS28340 PF04851 Type III restriction enzyme, res subunit DNK48_RS28355 PF07690 Major Facilitator Superfamily DNK48_RS28375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS28385 PF02913 FAD linked oxidases, C-terminal domain DNK48_RS28385 PF01565 FAD binding domain DNK48_RS28390 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS28390 PF00107 Zinc-binding dehydrogenase DNK48_RS28415 PF05547 Immune inhibitor A peptidase M6 DNK48_RS28415 PF00801 PKD domain DNK48_RS28425 PF00857 Isochorismatase family DNK48_RS28430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DNK48_RS28430 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DNK48_RS28435 PF02617 ATP-dependent Clp protease adaptor protein ClpS DNK48_RS28445 PF00324 Amino acid permease DNK48_RS28450 PF14464 Prokaryotic homologs of the JAB domain DNK48_RS28455 PF02597 ThiS family DNK48_RS28460 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS28465 PF12706 Beta-lactamase superfamily domain DNK48_RS28475 PF03412 Peptidase C39 family DNK48_RS28475 PF00664 ABC transporter transmembrane region DNK48_RS28475 PF00005 ABC transporter DNK48_RS28480 PF02378 Phosphotransferase system, EIIC DNK48_RS28485 PF00367 phosphotransferase system, EIIB DNK48_RS28490 PF01138 3' exoribonuclease family, domain 1 DNK48_RS28490 PF03725 3' exoribonuclease family, domain 2 DNK48_RS28500 PF01725 Ham1 family DNK48_RS28510 PF00578 AhpC/TSA family DNK48_RS28520 PF00166 Chaperonin 10 Kd subunit DNK48_RS28525 PF00912 Transglycosylase DNK48_RS28525 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS28540 PF00005 ABC transporter DNK48_RS28540 PF13732 Domain of unknown function (DUF4162) DNK48_RS28545 PF08044 Domain of unknown function (DUF1707) DNK48_RS28555 PF04286 Protein of unknown function (DUF445) DNK48_RS28560 PF04203 Sortase domain DNK48_RS28575 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS28580 PF03928 Haem-degrading DNK48_RS28585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS28585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS28590 PF00480 ROK family DNK48_RS28590 PF01047 MarR family DNK48_RS28605 PF13344 Haloacid dehalogenase-like hydrolase DNK48_RS28630 PF07730 Histidine kinase DNK48_RS28630 PF05384 Sensor protein DegS DNK48_RS28630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS28635 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS28635 PF00072 Response regulator receiver domain DNK48_RS28650 PF07729 FCD domain DNK48_RS28650 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS28685 PF18416 N-acetylglucosamine binding protein domain 2 DNK48_RS28685 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNK48_RS28720 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS28725 PF09084 NMT1/THI5 like DNK48_RS28735 PF00296 Luciferase-like monooxygenase DNK48_RS28740 PF16912 Glucose dehydrogenase C-terminus DNK48_RS28740 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS28745 PF07690 Major Facilitator Superfamily DNK48_RS28750 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS28755 PF00550 Phosphopantetheine attachment site DNK48_RS28760 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS28760 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS28765 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS28765 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS28780 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS28780 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS28810 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS28810 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS28815 PF00698 Acyl transferase domain DNK48_RS28820 PF00550 Phosphopantetheine attachment site DNK48_RS28825 PF07977 FabA-like domain DNK48_RS28830 PF07977 FabA-like domain DNK48_RS28850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNK48_RS28850 PF00364 Biotin-requiring enzyme DNK48_RS28850 PF00289 Biotin carboxylase, N-terminal domain DNK48_RS28850 PF02785 Biotin carboxylase C-terminal domain DNK48_RS28865 PF00561 alpha/beta hydrolase fold DNK48_RS28865 PF08386 TAP-like protein DNK48_RS28885 PF00005 ABC transporter DNK48_RS28890 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS28895 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS28900 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS28910 PF01425 Amidase DNK48_RS28915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS28915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS28920 PF17645 Arylmalonate decarboxylase DNK48_RS28925 PF17645 Arylmalonate decarboxylase DNK48_RS28935 PF04261 Dyp-type peroxidase family DNK48_RS28945 PF00296 Luciferase-like monooxygenase DNK48_RS28950 PF00563 EAL domain DNK48_RS28950 PF00990 Diguanylate cyclase, GGDEF domain DNK48_RS28950 PF03707 Bacterial signalling protein N terminal repeat DNK48_RS28960 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS28965 PF07730 Histidine kinase DNK48_RS28965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS28980 PF03704 Bacterial transcriptional activator domain DNK48_RS28985 PF01494 FAD binding domain DNK48_RS28990 PF01965 DJ-1/PfpI family DNK48_RS28990 PF12833 Helix-turn-helix domain DNK48_RS29000 PF06722 Protein of unknown function (DUF1205) DNK48_RS29045 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS29070 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS29070 PF00072 Response regulator receiver domain DNK48_RS29075 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS29075 PF16750 Sensor domain of 2-component histidine kinase DNK48_RS29075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS29075 PF00672 HAMP domain DNK48_RS29080 PF02839 Carbohydrate binding domain DNK48_RS29085 PF13631 Cytochrome b(N-terminal)/b6/petB DNK48_RS29090 PF00232 Glycosyl hydrolase family 1 DNK48_RS29095 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS29100 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS29110 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS29115 PF01341 Glycosyl hydrolases family 6 DNK48_RS29115 PF00553 Cellulose binding domain DNK48_RS29115 PF00041 Fibronectin type III domain DNK48_RS29125 PF02011 Glycosyl hydrolase family 48 DNK48_RS29125 PF00553 Cellulose binding domain DNK48_RS29125 PF00041 Fibronectin type III domain DNK48_RS29140 PF02861 Clp amino terminal domain, pathogenicity island component DNK48_RS29145 PF13411 MerR HTH family regulatory protein DNK48_RS29150 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS29155 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS29155 PF00107 Zinc-binding dehydrogenase DNK48_RS29165 PF00557 Metallopeptidase family M24 DNK48_RS29190 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DNK48_RS29260 PF00929 Exonuclease DNK48_RS29265 PF12833 Helix-turn-helix domain DNK48_RS29265 PF01965 DJ-1/PfpI family DNK48_RS29275 PF00582 Universal stress protein family DNK48_RS29280 PF01380 SIS domain DNK48_RS29295 PF00728 Glycosyl hydrolase family 20, catalytic domain DNK48_RS29295 PF02838 Glycosyl hydrolase family 20, domain 2 DNK48_RS29300 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS29300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS29300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS29305 PF00682 HMGL-like DNK48_RS29320 PF01039 Carboxyl transferase domain DNK48_RS29330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS29330 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS29330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS29340 PF15698 Phosphatase DNK48_RS29345 PF00271 Helicase conserved C-terminal domain DNK48_RS29345 PF00270 DEAD/DEAH box helicase DNK48_RS29350 PF00313 'Cold-shock' DNA-binding domain DNK48_RS29360 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS29365 PF01022 Bacterial regulatory protein, arsR family DNK48_RS29385 PF07730 Histidine kinase DNK48_RS29390 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS29390 PF00072 Response regulator receiver domain DNK48_RS29400 PF00005 ABC transporter DNK48_RS29400 PF00664 ABC transporter transmembrane region DNK48_RS29410 PF05576 PS-10 peptidase S37 DNK48_RS29415 PF00933 Glycosyl hydrolase family 3 N terminal domain DNK48_RS29415 PF01915 Glycosyl hydrolase family 3 C-terminal domain DNK48_RS29425 PF00892 EamA-like transporter family DNK48_RS29435 PF05175 Methyltransferase small domain DNK48_RS29445 PF04542 Sigma-70 region 2 DNK48_RS29445 PF04545 Sigma-70, region 4 DNK48_RS29450 PF00583 Acetyltransferase (GNAT) family DNK48_RS29465 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS29470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS29470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS29490 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS29495 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS29505 PF07282 Putative transposase DNA-binding domain DNK48_RS29505 PF01385 Probable transposase DNK48_RS29505 PF12323 Helix-turn-helix domain DNK48_RS29515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS29515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS29525 PF01261 Xylose isomerase-like TIM barrel DNK48_RS29525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS29535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS29535 PF03466 LysR substrate binding domain DNK48_RS29545 PF05025 RbsD / FucU transport protein family DNK48_RS29550 PF00294 pfkB family carbohydrate kinase DNK48_RS29555 PF13407 Periplasmic binding protein domain DNK48_RS29560 PF00005 ABC transporter DNK48_RS29565 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS29570 PF14490 Helix-hairpin-helix containing domain DNK48_RS29570 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DNK48_RS29570 PF13538 UvrD-like helicase C-terminal domain DNK48_RS29575 PF00285 Citrate synthase, C-terminal domain DNK48_RS29580 PF00403 Heavy-metal-associated domain DNK48_RS29595 PF03176 MMPL family DNK48_RS29605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS29605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS29610 PF03786 D-mannonate dehydratase (UxuA) DNK48_RS29615 PF00005 ABC transporter DNK48_RS29620 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS29630 PF00294 pfkB family carbohydrate kinase DNK48_RS29640 PF04962 KduI/IolB family DNK48_RS29645 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS29645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS29645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS29650 PF00171 Aldehyde dehydrogenase family DNK48_RS29660 PF06259 Alpha/beta hydrolase DNK48_RS29675 PF00975 Thioesterase domain DNK48_RS29685 PF00072 Response regulator receiver domain DNK48_RS29685 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS29690 PF00672 HAMP domain DNK48_RS29690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS29690 PF07730 Histidine kinase DNK48_RS29700 PF03703 Bacterial PH domain DNK48_RS29710 PF14765 Polyketide synthase dehydratase DNK48_RS29710 PF00550 Phosphopantetheine attachment site DNK48_RS29710 PF08659 KR domain DNK48_RS29710 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29710 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29710 PF00698 Acyl transferase domain DNK48_RS29710 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29715 PF00698 Acyl transferase domain DNK48_RS29715 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29715 PF14765 Polyketide synthase dehydratase DNK48_RS29715 PF00550 Phosphopantetheine attachment site DNK48_RS29715 PF08659 KR domain DNK48_RS29715 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29715 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS29715 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29720 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29720 PF00698 Acyl transferase domain DNK48_RS29720 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29720 PF00550 Phosphopantetheine attachment site DNK48_RS29720 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29720 PF00550 Phosphopantetheine attachment site DNK48_RS29720 PF08659 KR domain DNK48_RS29720 PF08659 KR domain DNK48_RS29720 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29720 PF14765 Polyketide synthase dehydratase DNK48_RS29720 PF14765 Polyketide synthase dehydratase DNK48_RS29720 PF00698 Acyl transferase domain DNK48_RS29720 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29720 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29725 PF08990 Erythronolide synthase docking DNK48_RS29725 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29725 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29725 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29725 PF08659 KR domain DNK48_RS29725 PF18369 Polyketide synthase dimerisation element domain DNK48_RS29725 PF00550 Phosphopantetheine attachment site DNK48_RS29725 PF00975 Thioesterase domain DNK48_RS29725 PF00698 Acyl transferase domain DNK48_RS29730 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29730 PF08659 KR domain DNK48_RS29730 PF00698 Acyl transferase domain DNK48_RS29730 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29730 PF14765 Polyketide synthase dehydratase DNK48_RS29730 PF00550 Phosphopantetheine attachment site DNK48_RS29730 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29735 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29735 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS29735 PF00698 Acyl transferase domain DNK48_RS29735 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29735 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29735 PF08659 KR domain DNK48_RS29735 PF14765 Polyketide synthase dehydratase DNK48_RS29735 PF00550 Phosphopantetheine attachment site DNK48_RS29740 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29740 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29740 PF00550 Phosphopantetheine attachment site DNK48_RS29740 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29740 PF00698 Acyl transferase domain DNK48_RS29740 PF08659 KR domain DNK48_RS29745 PF14765 Polyketide synthase dehydratase DNK48_RS29745 PF00550 Phosphopantetheine attachment site DNK48_RS29745 PF00698 Acyl transferase domain DNK48_RS29745 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS29745 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS29745 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS29745 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS29745 PF08659 KR domain DNK48_RS29800 PF04738 Lantibiotic dehydratase, N terminus DNK48_RS29800 PF14028 Lantibiotic biosynthesis dehydratase C-term DNK48_RS29820 PF00535 Glycosyl transferase family 2 DNK48_RS29830 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS29835 PF00561 alpha/beta hydrolase fold DNK48_RS29855 PF00005 ABC transporter DNK48_RS29865 PF00501 AMP-binding enzyme DNK48_RS29865 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS29870 PF01593 Flavin containing amine oxidoreductase DNK48_RS29890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS29890 PF03466 LysR substrate binding domain DNK48_RS29895 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DNK48_RS29900 PF02641 Uncharacterized ACR, COG1993 DNK48_RS29905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DNK48_RS29910 PF00348 Polyprenyl synthetase DNK48_RS29915 PF03621 MbtH-like protein DNK48_RS29925 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS29930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS29945 PF00999 Sodium/hydrogen exchanger family DNK48_RS29945 PF02254 TrkA-N domain DNK48_RS29965 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS29965 PF17754 MftR C-terminal domain DNK48_RS29995 PF00436 Single-strand binding protein family DNK48_RS30005 PF00005 ABC transporter DNK48_RS30005 PF12848 ABC transporter DNK48_RS30020 PF01152 Bacterial-like globin DNK48_RS30050 PF16919 Protein kinase G rubredoxin domain DNK48_RS30050 PF16918 Protein kinase G tetratricopeptide repeat DNK48_RS30050 PF00069 Protein kinase domain DNK48_RS30060 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS30075 PF02056 Family 4 glycosyl hydrolase DNK48_RS30075 PF11975 Family 4 glycosyl hydrolase C-terminal domain DNK48_RS30080 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS30085 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS30090 PF13416 Bacterial extracellular solute-binding protein DNK48_RS30095 PF00480 ROK family DNK48_RS30105 PF00924 Mechanosensitive ion channel DNK48_RS30115 PF02838 Glycosyl hydrolase family 20, domain 2 DNK48_RS30115 PF00041 Fibronectin type III domain DNK48_RS30115 PF00754 F5/8 type C domain DNK48_RS30115 PF07555 beta-N-acetylglucosaminidase DNK48_RS30115 PF00963 Cohesin domain DNK48_RS30125 PF02446 4-alpha-glucanotransferase DNK48_RS30140 PF03405 Fatty acid desaturase DNK48_RS30150 PF11838 ERAP1-like C-terminal domain DNK48_RS30150 PF01433 Peptidase family M1 domain DNK48_RS30160 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNK48_RS30160 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNK48_RS30175 PF11838 ERAP1-like C-terminal domain DNK48_RS30175 PF01433 Peptidase family M1 domain DNK48_RS30180 PF01323 DSBA-like thioredoxin domain DNK48_RS30190 PF00324 Amino acid permease DNK48_RS30205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DNK48_RS30205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DNK48_RS30210 PF01970 Tripartite tricarboxylate transporter TctA family DNK48_RS30220 PF03401 Tripartite tricarboxylate transporter family receptor DNK48_RS30235 PF00324 Amino acid permease DNK48_RS30240 PF02502 Ribose/Galactose Isomerase DNK48_RS30245 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DNK48_RS30245 PF06827 Zinc finger found in FPG and IleRS DNK48_RS30245 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DNK48_RS30250 PF17668 Acetyltransferase (GNAT) domain DNK48_RS30250 PF13530 Sterol carrier protein domain DNK48_RS30270 PF01757 Acyltransferase family DNK48_RS30290 PF05697 Bacterial trigger factor protein (TF) DNK48_RS30290 PF05698 Bacterial trigger factor protein (TF) C-terminus DNK48_RS30290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DNK48_RS30295 PF00574 Clp protease DNK48_RS30300 PF00574 Clp protease DNK48_RS30305 PF06689 ClpX C4-type zinc finger DNK48_RS30305 PF07724 AAA domain (Cdc48 subfamily) DNK48_RS30305 PF10431 C-terminal, D2-small domain, of ClpB protein DNK48_RS30325 PF10458 Valyl tRNA synthetase tRNA binding arm DNK48_RS30325 PF08264 Anticodon-binding domain of tRNA DNK48_RS30325 PF00133 tRNA synthetases class I (I, L, M and V) DNK48_RS30330 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS30335 PF02875 Mur ligase family, glutamate ligase domain DNK48_RS30335 PF08245 Mur ligase middle domain DNK48_RS30345 PF00334 Nucleoside diphosphate kinase DNK48_RS30365 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS30365 PF03717 Penicillin-binding Protein dimerisation domain DNK48_RS30375 PF01098 Cell cycle protein DNK48_RS30380 PF05235 CHAD domain DNK48_RS30380 PF01928 CYTH domain DNK48_RS30395 PF10150 Ribonuclease E/G family DNK48_RS30400 PF00829 Ribosomal prokaryotic L21 protein DNK48_RS30405 PF01016 Ribosomal L27 protein DNK48_RS30410 PF01926 50S ribosome-binding GTPase DNK48_RS30410 PF01018 GTP1/OBG DNK48_RS30410 PF09269 Domain of unknown function (DUF1967) DNK48_RS30420 PF01472 PUA domain DNK48_RS30420 PF00696 Amino acid kinase family DNK48_RS30430 PF00171 Aldehyde dehydrogenase family DNK48_RS30445 PF01435 Peptidase family M48 DNK48_RS30450 PF01467 Cytidylyltransferase-like DNK48_RS30465 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS30490 PF09334 tRNA synthetases class I (M) DNK48_RS30490 PF08264 Anticodon-binding domain of tRNA DNK48_RS30490 PF13603 Leucyl-tRNA synthetase, Domain 2 DNK48_RS30500 PF02645 Uncharacterised protein, DegV family COG1307 DNK48_RS30535 PF01649 Ribosomal protein S20 DNK48_RS30540 PF06421 GTP-binding protein LepA C-terminus DNK48_RS30540 PF03144 Elongation factor Tu domain 2 DNK48_RS30540 PF00009 Elongation factor Tu GTP binding domain DNK48_RS30540 PF00679 Elongation factor G C-terminus DNK48_RS30545 PF00501 AMP-binding enzyme DNK48_RS30555 PF04055 Radical SAM superfamily DNK48_RS30570 PF01628 HrcA protein C terminal domain DNK48_RS30575 PF00684 DnaJ central domain DNK48_RS30575 PF01556 DnaJ C terminal domain DNK48_RS30575 PF00226 DnaJ domain DNK48_RS30580 PF03060 Nitronate monooxygenase DNK48_RS30585 PF04452 RNA methyltransferase DNK48_RS30595 PF01230 HIT domain DNK48_RS30600 PF12706 Beta-lactamase superfamily domain DNK48_RS30600 PF00753 Metallo-beta-lactamase superfamily DNK48_RS30605 PF00294 pfkB family carbohydrate kinase DNK48_RS30610 PF02562 PhoH-like protein DNK48_RS30615 PF02130 Uncharacterized protein family UPF0054 DNK48_RS30620 PF00571 CBS domain DNK48_RS30620 PF01595 Cyclin M transmembrane N-terminal domain DNK48_RS30620 PF03471 Transporter associated domain DNK48_RS30635 PF07650 KH domain DNK48_RS30635 PF01926 50S ribosome-binding GTPase DNK48_RS30645 PF16485 Protealysin propeptide DNK48_RS30645 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNK48_RS30645 PF01447 Thermolysin metallopeptidase, catalytic domain DNK48_RS30650 PF00682 HMGL-like DNK48_RS30650 PF08502 LeuA allosteric (dimerisation) domain DNK48_RS30660 PF03176 MMPL family DNK48_RS30665 PF07730 Histidine kinase DNK48_RS30670 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS30670 PF00072 Response regulator receiver domain DNK48_RS30675 PF07411 Domain of unknown function (DUF1508) DNK48_RS30680 PF13302 Acetyltransferase (GNAT) domain DNK48_RS30740 PF02565 Recombination protein O C terminal DNK48_RS30740 PF11967 Recombination protein O N terminal DNK48_RS30745 PF01255 Putative undecaprenyl diphosphate synthase DNK48_RS30755 PF00534 Glycosyl transferases group 1 DNK48_RS30755 PF13439 Glycosyltransferase Family 4 DNK48_RS30770 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS30775 PF06441 Epoxide hydrolase N terminus DNK48_RS30785 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS30795 PF07690 Major Facilitator Superfamily DNK48_RS30805 PF01475 Ferric uptake regulator family DNK48_RS30810 PF00950 ABC 3 transport family DNK48_RS30815 PF00005 ABC transporter DNK48_RS30820 PF01297 Zinc-uptake complex component A periplasmic DNK48_RS30820 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DNK48_RS30825 PF03129 Anticodon binding domain DNK48_RS30825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNK48_RS30845 PF00072 Response regulator receiver domain DNK48_RS30845 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS30850 PF07690 Major Facilitator Superfamily DNK48_RS30860 PF07690 Major Facilitator Superfamily DNK48_RS30865 PF01207 Dihydrouridine synthase (Dus) DNK48_RS30895 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DNK48_RS30895 PF00391 PEP-utilising enzyme, mobile domain DNK48_RS30895 PF02896 PEP-utilising enzyme, TIM barrel domain DNK48_RS30925 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS30925 PF00072 Response regulator receiver domain DNK48_RS30930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS30930 PF00672 HAMP domain DNK48_RS30930 PF16527 Two-component sensor protein CpxA, periplasmic domain DNK48_RS30930 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS30940 PF13520 Amino acid permease DNK48_RS30945 PF00266 Aminotransferase class-V DNK48_RS30950 PF07702 UTRA domain DNK48_RS30950 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS30955 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS30960 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS30965 PF13416 Bacterial extracellular solute-binding protein DNK48_RS30970 PF02627 Carboxymuconolactone decarboxylase family DNK48_RS30975 PF00206 Lyase DNK48_RS30975 PF10397 Adenylosuccinate lyase C-terminus DNK48_RS30985 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DNK48_RS30985 PF00775 Dioxygenase DNK48_RS30990 PF00108 Thiolase, N-terminal domain DNK48_RS30990 PF02803 Thiolase, C-terminal domain DNK48_RS31000 PF01144 Coenzyme A transferase DNK48_RS31010 PF01047 MarR family DNK48_RS31015 PF17827 PrmC N-terminal domain DNK48_RS31015 PF05175 Methyltransferase small domain DNK48_RS31020 PF00106 short chain dehydrogenase DNK48_RS31030 PF14310 Fibronectin type III-like domain DNK48_RS31030 PF00933 Glycosyl hydrolase family 3 N terminal domain DNK48_RS31030 PF01915 Glycosyl hydrolase family 3 C-terminal domain DNK48_RS31035 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS31040 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS31050 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS31060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DNK48_RS31060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DNK48_RS31060 PF13806 Rieske-like [2Fe-2S] domain DNK48_RS31060 PF18267 Rubredoxin NAD+ reductase C-terminal domain DNK48_RS31060 PF04324 BFD-like [2Fe-2S] binding domain DNK48_RS31060 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS31070 PF18267 Rubredoxin NAD+ reductase C-terminal domain DNK48_RS31070 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS31070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DNK48_RS31070 PF04324 BFD-like [2Fe-2S] binding domain DNK48_RS31075 PF00067 Cytochrome P450 DNK48_RS31080 PF00067 Cytochrome P450 DNK48_RS31105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS31105 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS31105 PF00672 HAMP domain DNK48_RS31110 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS31110 PF00072 Response regulator receiver domain DNK48_RS31145 PF00962 Adenosine/AMP deaminase DNK48_RS31150 PF01568 Molydopterin dinucleotide binding domain DNK48_RS31150 PF00384 Molybdopterin oxidoreductase DNK48_RS31150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNK48_RS31160 PF13286 Phosphohydrolase-associated domain DNK48_RS31160 PF01966 HD domain DNK48_RS31165 PF14759 Reductase C-terminal DNK48_RS31165 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS31170 PF01807 CHC2 zinc finger DNK48_RS31170 PF13662 Toprim domain DNK48_RS31170 PF08278 DNA primase DnaG DnaB-binding DNK48_RS31170 PF10410 DnaB-helicase binding domain of primase DNK48_RS31170 PF08275 DNA primase catalytic core, N-terminal domain DNK48_RS31175 PF04539 Sigma-70 region 3 DNK48_RS31175 PF04545 Sigma-70, region 4 DNK48_RS31175 PF04542 Sigma-70 region 2 DNK48_RS31175 PF00140 Sigma-70 factor, region 1.2 DNK48_RS31180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS31180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS31205 PF00561 alpha/beta hydrolase fold DNK48_RS31210 PF03060 Nitronate monooxygenase DNK48_RS31235 PF01258 Prokaryotic dksA/traR C4-type zinc finger DNK48_RS31240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS31240 PF05231 MASE1 DNK48_RS31240 PF07730 Histidine kinase DNK48_RS31245 PF00072 Response regulator receiver domain DNK48_RS31245 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS31250 PF02355 Protein export membrane protein DNK48_RS31250 PF07549 SecD/SecF GG Motif DNK48_RS31255 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS31260 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS31270 PF00294 pfkB family carbohydrate kinase DNK48_RS31275 PF00455 DeoR C terminal sensor domain DNK48_RS31275 PF08220 DeoR-like helix-turn-helix domain DNK48_RS31280 PF02056 Family 4 glycosyl hydrolase DNK48_RS31280 PF11975 Family 4 glycosyl hydrolase C-terminal domain DNK48_RS31290 PF06719 AraC-type transcriptional regulator N-terminus DNK48_RS31290 PF12833 Helix-turn-helix domain DNK48_RS31295 PF01799 [2Fe-2S] binding domain DNK48_RS31295 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNK48_RS31295 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS31300 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS31300 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS31305 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS31305 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS31330 PF00132 Bacterial transferase hexapeptide (six repeats) DNK48_RS31340 PF00085 Thioredoxin DNK48_RS31345 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS31360 PF01614 Bacterial transcriptional regulator DNK48_RS31360 PF09339 IclR helix-turn-helix domain DNK48_RS31365 PF08450 SMP-30/Gluconolactonase/LRE-like region DNK48_RS31385 PF00107 Zinc-binding dehydrogenase DNK48_RS31385 PF16884 N-terminal domain of oxidoreductase DNK48_RS31390 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DNK48_RS31395 PF00544 Pectate lyase DNK48_RS31415 PF01263 Aldose 1-epimerase DNK48_RS31420 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS31425 PF00005 ABC transporter DNK48_RS31430 PF13407 Periplasmic binding protein domain DNK48_RS31440 PF00107 Zinc-binding dehydrogenase DNK48_RS31440 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS31445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS31445 PF13378 Enolase C-terminal domain-like DNK48_RS31470 PF14310 Fibronectin type III-like domain DNK48_RS31470 PF00933 Glycosyl hydrolase family 3 N terminal domain DNK48_RS31470 PF01915 Glycosyl hydrolase family 3 C-terminal domain DNK48_RS31470 PF07691 PA14 domain DNK48_RS31485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DNK48_RS31485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNK48_RS31490 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS31490 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS31495 PF00550 Phosphopantetheine attachment site DNK48_RS31500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNK48_RS31500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNK48_RS31505 PF00698 Acyl transferase domain DNK48_RS31510 PF13556 PucR C-terminal helix-turn-helix domain DNK48_RS31510 PF17853 GGDEF-like domain DNK48_RS31515 PF17954 Quercetinase C-terminal cupin domain DNK48_RS31515 PF02678 Pirin DNK48_RS31525 PF13411 MerR HTH family regulatory protein DNK48_RS31530 PF00248 Aldo/keto reductase family DNK48_RS31535 PF07690 Major Facilitator Superfamily DNK48_RS31550 PF00072 Response regulator receiver domain DNK48_RS31550 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS31555 PF07730 Histidine kinase DNK48_RS31570 PF17754 MftR C-terminal domain DNK48_RS31570 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS31575 PF07690 Major Facilitator Superfamily DNK48_RS31585 PF00456 Transketolase, thiamine diphosphate binding domain DNK48_RS31585 PF17831 Pyruvate dehydrogenase E1 component middle domain DNK48_RS31590 PF11253 Protein of unknown function (DUF3052) DNK48_RS31595 PF00578 AhpC/TSA family DNK48_RS31600 PF02342 TerD domain DNK48_RS31605 PF02342 TerD domain DNK48_RS31615 PF02342 TerD domain DNK48_RS31650 PF01596 O-methyltransferase DNK48_RS31675 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS31675 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS31675 PF08659 KR domain DNK48_RS31675 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS31675 PF14765 Polyketide synthase dehydratase DNK48_RS31675 PF00550 Phosphopantetheine attachment site DNK48_RS31675 PF00698 Acyl transferase domain DNK48_RS31675 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS31680 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS31730 PF03358 NADPH-dependent FMN reductase DNK48_RS31745 PF00925 GTP cyclohydrolase II DNK48_RS31755 PF03781 Sulfatase-modifying factor enzyme 1 DNK48_RS31755 PF00069 Protein kinase domain DNK48_RS31760 PF13649 Methyltransferase domain DNK48_RS31765 PF03704 Bacterial transcriptional activator domain DNK48_RS31765 PF00931 NB-ARC domain DNK48_RS31765 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS31780 PF00698 Acyl transferase domain DNK48_RS31780 PF00550 Phosphopantetheine attachment site DNK48_RS31780 PF08659 KR domain DNK48_RS31780 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS31780 PF08990 Erythronolide synthase docking DNK48_RS31780 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS31780 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS31780 PF14765 Polyketide synthase dehydratase DNK48_RS31780 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS31785 PF17754 MftR C-terminal domain DNK48_RS31785 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS31805 PF00574 Clp protease DNK48_RS31810 PF00574 Clp protease DNK48_RS31895 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS31905 PF07690 Major Facilitator Superfamily DNK48_RS31925 PF02824 TGS domain DNK48_RS31925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNK48_RS31925 PF03129 Anticodon binding domain DNK48_RS31925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNK48_RS31930 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS31930 PF14759 Reductase C-terminal DNK48_RS31940 PF00067 Cytochrome P450 DNK48_RS31945 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS31945 PF18698 Histidine kinase sensor domain DNK48_RS31945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS31945 PF00672 HAMP domain DNK48_RS31945 PF00989 PAS fold DNK48_RS31950 PF00072 Response regulator receiver domain DNK48_RS31950 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS31970 PF12833 Helix-turn-helix domain DNK48_RS31970 PF12852 Cupin DNK48_RS31975 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS31975 PF00107 Zinc-binding dehydrogenase DNK48_RS32015 PF00107 Zinc-binding dehydrogenase DNK48_RS32015 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS32030 PF12833 Helix-turn-helix domain DNK48_RS32050 PF00067 Cytochrome P450 DNK48_RS32055 PF00108 Thiolase, N-terminal domain DNK48_RS32055 PF02803 Thiolase, C-terminal domain DNK48_RS32070 PF00005 ABC transporter DNK48_RS32105 PF00171 Aldehyde dehydrogenase family DNK48_RS32115 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS32120 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS32120 PF17925 Tetracyclin repressor-like, C-terminal domain DNK48_RS32125 PF13439 Glycosyltransferase Family 4 DNK48_RS32125 PF00534 Glycosyl transferases group 1 DNK48_RS32130 PF08241 Methyltransferase domain DNK48_RS32145 PF00296 Luciferase-like monooxygenase DNK48_RS32155 PF01520 N-acetylmuramoyl-L-alanine amidase DNK48_RS32160 PF17843 MycE methyltransferase N-terminal DNK48_RS32165 PF01575 MaoC like domain DNK48_RS32175 PF00106 short chain dehydrogenase DNK48_RS32185 PF01497 Periplasmic binding protein DNK48_RS32190 PF01784 NIF3 (NGG1p interacting factor 3) DNK48_RS32200 PF13456 Reverse transcriptase-like DNK48_RS32200 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS32205 PF01081 KDPG and KHG aldolase DNK48_RS32210 PF03883 Peroxide stress protein YaaA DNK48_RS32235 PF03176 MMPL family DNK48_RS32245 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS32245 PF00072 Response regulator receiver domain DNK48_RS32265 PF00180 Isocitrate/isopropylmalate dehydrogenase DNK48_RS32270 PF03466 LysR substrate binding domain DNK48_RS32270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS32275 PF00561 alpha/beta hydrolase fold DNK48_RS32285 PF00011 Hsp20/alpha crystallin family DNK48_RS32290 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS32300 PF00085 Thioredoxin DNK48_RS32305 PF07724 AAA domain (Cdc48 subfamily) DNK48_RS32305 PF10431 C-terminal, D2-small domain, of ClpB protein DNK48_RS32305 PF02861 Clp amino terminal domain, pathogenicity island component DNK48_RS32305 PF17871 AAA lid domain DNK48_RS32305 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS32315 PF01556 DnaJ C terminal domain DNK48_RS32315 PF00226 DnaJ domain DNK48_RS32320 PF01025 GrpE DNK48_RS32325 PF00012 Hsp70 protein DNK48_RS32345 PF16859 Tetracyclin repressor-like, C-terminal domain DNK48_RS32345 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS32365 PF09423 PhoD-like phosphatase DNK48_RS32365 PF16655 PhoD-like phosphatase, N-terminal domain DNK48_RS32370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS32370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS32375 PF07690 Major Facilitator Superfamily DNK48_RS32380 PF00144 Beta-lactamase DNK48_RS32385 PF00067 Cytochrome P450 DNK48_RS32415 PF03239 Iron permease FTR1 family DNK48_RS32420 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNK48_RS32420 PF04261 Dyp-type peroxidase family DNK48_RS32425 PF09375 Imelysin DNK48_RS32430 PF00005 ABC transporter DNK48_RS32435 PF01032 FecCD transport family DNK48_RS32440 PF01497 Periplasmic binding protein DNK48_RS32475 PF01126 Heme oxygenase DNK48_RS32480 PF00557 Metallopeptidase family M24 DNK48_RS32495 PF00490 Delta-aminolevulinic acid dehydratase DNK48_RS32500 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DNK48_RS32500 PF03900 Porphobilinogen deaminase, C-terminal domain DNK48_RS32515 PF02973 Sialidase, N-terminal domain DNK48_RS32515 PF13088 BNR repeat-like domain DNK48_RS32515 PF04650 YSIRK type signal peptide DNK48_RS32525 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS32530 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS32555 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS32560 PF01061 ABC-2 type transporter DNK48_RS32565 PF00005 ABC transporter DNK48_RS32565 PF13732 Domain of unknown function (DUF4162) DNK48_RS32570 PF02548 Ketopantoate hydroxymethyltransferase DNK48_RS32575 PF07690 Major Facilitator Superfamily DNK48_RS32580 PF16859 Tetracyclin repressor-like, C-terminal domain DNK48_RS32580 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS32590 PF07690 Major Facilitator Superfamily DNK48_RS32595 PF08386 TAP-like protein DNK48_RS32595 PF00561 alpha/beta hydrolase fold DNK48_RS32600 PF00795 Carbon-nitrogen hydrolase DNK48_RS32600 PF02540 NAD synthase DNK48_RS32605 PF00394 Multicopper oxidase DNK48_RS32605 PF07732 Multicopper oxidase DNK48_RS32605 PF07731 Multicopper oxidase DNK48_RS32610 PF00120 Glutamine synthetase, catalytic domain DNK48_RS32610 PF03951 Glutamine synthetase, beta-Grasp domain DNK48_RS32620 PF08335 GlnD PII-uridylyltransferase DNK48_RS32620 PF03710 Glutamate-ammonia ligase adenylyltransferase DNK48_RS32645 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DNK48_RS32650 PF13309 HTH domain DNK48_RS32650 PF08348 YheO-like PAS domain DNK48_RS32655 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS32675 PF00128 Alpha amylase, catalytic domain DNK48_RS32680 PF13416 Bacterial extracellular solute-binding protein DNK48_RS32685 PF14785 Maltose transport system permease protein MalF P2 domain DNK48_RS32685 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS32690 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS32695 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS32700 PF00686 Starch binding domain DNK48_RS32700 PF02806 Alpha amylase, C-terminal all-beta domain DNK48_RS32700 PF00128 Alpha amylase, catalytic domain DNK48_RS32705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNK48_RS32705 PF17967 Pullulanase N2 domain DNK48_RS32705 PF18494 Pullulanase Ins domain DNK48_RS32705 PF11852 Domain of unknown function (DUF3372) DNK48_RS32705 PF03714 Bacterial pullanase-associated domain DNK48_RS32720 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS32720 PF00072 Response regulator receiver domain DNK48_RS32735 PF03176 MMPL family DNK48_RS32740 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS32755 PF00083 Sugar (and other) transporter DNK48_RS32755 PF07690 Major Facilitator Superfamily DNK48_RS32760 PF00795 Carbon-nitrogen hydrolase DNK48_RS32770 PF07729 FCD domain DNK48_RS32770 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS32775 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS32775 PF00698 Acyl transferase domain DNK48_RS32775 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS32775 PF14765 Polyketide synthase dehydratase DNK48_RS32775 PF00550 Phosphopantetheine attachment site DNK48_RS32775 PF08659 KR domain DNK48_RS32775 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS32775 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS32775 PF08990 Erythronolide synthase docking DNK48_RS32780 PF13305 Tetracyclin repressor-like, C-terminal domain DNK48_RS32780 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS32785 PF00719 Inorganic pyrophosphatase DNK48_RS32790 PF03412 Peptidase C39 family DNK48_RS32790 PF00005 ABC transporter DNK48_RS32790 PF00664 ABC transporter transmembrane region DNK48_RS32795 PF01810 LysE type translocator DNK48_RS32815 PF00120 Glutamine synthetase, catalytic domain DNK48_RS32815 PF03951 Glutamine synthetase, beta-Grasp domain DNK48_RS32825 PF13829 Domain of unknown function (DUF4191) DNK48_RS32835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DNK48_RS32835 PF04055 Radical SAM superfamily DNK48_RS32855 PF01593 Flavin containing amine oxidoreductase DNK48_RS32860 PF08338 Domain of unknown function (DUF1731) DNK48_RS32860 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS32885 PF17831 Pyruvate dehydrogenase E1 component middle domain DNK48_RS32885 PF00456 Transketolase, thiamine diphosphate binding domain DNK48_RS32890 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS32890 PF07729 FCD domain DNK48_RS32900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNK48_RS32900 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS32905 PF00883 Cytosol aminopeptidase family, catalytic domain DNK48_RS32905 PF02789 Cytosol aminopeptidase family, N-terminal domain DNK48_RS32910 PF02654 Cobalamin-5-phosphate synthase DNK48_RS32915 PF02277 Phosphoribosyltransferase DNK48_RS32935 PF11241 Protein of unknown function (DUF3043) DNK48_RS32950 PF07730 Histidine kinase DNK48_RS32950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS32955 PF00072 Response regulator receiver domain DNK48_RS32955 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS32960 PF02445 Quinolinate synthetase A protein DNK48_RS32965 PF01521 Iron-sulphur cluster biosynthesis DNK48_RS32980 PF00294 pfkB family carbohydrate kinase DNK48_RS32985 PF00266 Aminotransferase class-V DNK48_RS32990 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DNK48_RS32995 PF00115 Cytochrome C and Quinol oxidase polypeptide I DNK48_RS33000 PF12270 Cytochrome c oxidase subunit IV DNK48_RS33005 PF03734 L,D-transpeptidase catalytic domain DNK48_RS33005 PF17964 Bacterial Ig domain DNK48_RS33015 PF00510 Cytochrome c oxidase subunit III DNK48_RS33020 PF00034 Cytochrome c DNK48_RS33020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DNK48_RS33025 PF00355 Rieske [2Fe-2S] domain DNK48_RS33030 PF13631 Cytochrome b(N-terminal)/b6/petB DNK48_RS33035 PF02885 Glycosyl transferase family, helical bundle domain DNK48_RS33035 PF00591 Glycosyl transferase family, a/b domain DNK48_RS33040 PF00266 Aminotransferase class-V DNK48_RS33065 PF00877 NlpC/P60 family DNK48_RS33070 PF00877 NlpC/P60 family DNK48_RS33080 PF00534 Glycosyl transferases group 1 DNK48_RS33080 PF13439 Glycosyltransferase Family 4 DNK48_RS33085 PF00501 AMP-binding enzyme DNK48_RS33105 PF17230 Family of unknown function (DUF5304) DNK48_RS33110 PF00480 ROK family DNK48_RS33125 PF12146 Serine aminopeptidase, S33 DNK48_RS33140 PF00072 Response regulator receiver domain DNK48_RS33140 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS33145 PF00365 Phosphofructokinase DNK48_RS33150 PF00117 Glutamine amidotransferase class-I DNK48_RS33150 PF00425 chorismate binding enzyme DNK48_RS33160 PF01474 Class-II DAHP synthetase family DNK48_RS33165 PF04324 BFD-like [2Fe-2S] binding domain DNK48_RS33165 PF00384 Molybdopterin oxidoreductase DNK48_RS33165 PF01568 Molydopterin dinucleotide binding domain DNK48_RS33165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNK48_RS33170 PF00210 Ferritin-like domain DNK48_RS33175 PF00174 Oxidoreductase molybdopterin binding domain DNK48_RS33185 PF01261 Xylose isomerase-like TIM barrel DNK48_RS33195 PF03793 PASTA domain DNK48_RS33195 PF00069 Protein kinase domain DNK48_RS33215 PF05690 Thiazole biosynthesis protein ThiG DNK48_RS33215 PF01266 FAD dependent oxidoreductase DNK48_RS33220 PF14759 Reductase C-terminal DNK48_RS33220 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS33230 PF02581 Thiamine monophosphate synthase DNK48_RS33235 PF02219 Methylenetetrahydrofolate reductase DNK48_RS33245 PF01593 Flavin containing amine oxidoreductase DNK48_RS33250 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS33250 PF08359 YsiA-like protein, C-terminal region DNK48_RS33260 PF00005 ABC transporter DNK48_RS33290 PF07726 ATPase family associated with various cellular activities (AAA) DNK48_RS33290 PF17863 AAA lid domain DNK48_RS33295 PF00484 Carbonic anhydrase DNK48_RS33300 PF01795 MraW methylase family DNK48_RS33310 PF03717 Penicillin-binding Protein dimerisation domain DNK48_RS33310 PF00905 Penicillin binding protein transpeptidase domain DNK48_RS33315 PF01225 Mur ligase family, catalytic domain DNK48_RS33315 PF08245 Mur ligase middle domain DNK48_RS33315 PF02875 Mur ligase family, glutamate ligase domain DNK48_RS33320 PF08245 Mur ligase middle domain DNK48_RS33320 PF02875 Mur ligase family, glutamate ligase domain DNK48_RS33320 PF01225 Mur ligase family, catalytic domain DNK48_RS33325 PF00953 Glycosyl transferase family 4 DNK48_RS33325 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DNK48_RS33330 PF08245 Mur ligase middle domain DNK48_RS33330 PF02875 Mur ligase family, glutamate ligase domain DNK48_RS33335 PF01098 Cell cycle protein DNK48_RS33340 PF03033 Glycosyltransferase family 28 N-terminal domain DNK48_RS33340 PF04101 Glycosyltransferase family 28 C-terminal domain DNK48_RS33345 PF03799 Cell division protein FtsQ DNK48_RS33345 PF08478 POTRA domain, FtsQ-type DNK48_RS33350 PF00091 Tubulin/FtsZ family, GTPase domain DNK48_RS33350 PF12327 FtsZ family, C-terminal domain DNK48_RS33355 PF02578 Multi-copper polyphenol oxidoreductase laccase DNK48_RS33360 PF01168 Alanine racemase, N-terminal domain DNK48_RS33365 PF04472 Cell division protein SepF DNK48_RS33375 PF05103 DivIVA protein DNK48_RS33380 PF00133 tRNA synthetases class I (I, L, M and V) DNK48_RS33380 PF08264 Anticodon-binding domain of tRNA DNK48_RS33390 PF01258 Prokaryotic dksA/traR C4-type zinc finger DNK48_RS33395 PF01252 Signal peptidase (SPase) II DNK48_RS33400 PF00849 RNA pseudouridylate synthase DNK48_RS33405 PF13673 Acetyltransferase (GNAT) domain DNK48_RS33420 PF16655 PhoD-like phosphatase, N-terminal domain DNK48_RS33420 PF09423 PhoD-like phosphatase DNK48_RS33440 PF02811 PHP domain DNK48_RS33440 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNK48_RS33440 PF14579 Helix-hairpin-helix motif DNK48_RS33440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNK48_RS33450 PF01936 NYN domain DNK48_RS33455 PF00005 ABC transporter DNK48_RS33455 PF13732 Domain of unknown function (DUF4162) DNK48_RS33470 PF04073 Aminoacyl-tRNA editing domain DNK48_RS33475 PF02190 ATP-dependent protease La (LON) substrate-binding domain DNK48_RS33475 PF05362 Lon protease (S16) C-terminal proteolytic domain DNK48_RS33475 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS33485 PF00815 Histidinol dehydrogenase DNK48_RS33490 PF00155 Aminotransferase class I and II DNK48_RS33495 PF00475 Imidazoleglycerol-phosphate dehydratase DNK48_RS33500 PF00117 Glutamine amidotransferase class-I DNK48_RS33505 PF00977 Histidine biosynthesis protein DNK48_RS33510 PF01042 Endoribonuclease L-PSP DNK48_RS33515 PF00977 Histidine biosynthesis protein DNK48_RS33520 PF00106 short chain dehydrogenase DNK48_RS33525 PF01032 FecCD transport family DNK48_RS33530 PF01497 Periplasmic binding protein DNK48_RS33535 PF00005 ABC transporter DNK48_RS33545 PF04794 YdjC-like protein DNK48_RS33565 PF01502 Phosphoribosyl-AMP cyclohydrolase DNK48_RS33570 PF04715 Anthranilate synthase component I, N terminal region DNK48_RS33570 PF00425 chorismate binding enzyme DNK48_RS33590 PF00218 Indole-3-glycerol phosphate synthase DNK48_RS33595 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS33600 PF00290 Tryptophan synthase alpha chain DNK48_RS33610 PF01790 Prolipoprotein diacylglyceryl transferase DNK48_RS33620 PF04898 Glutamate synthase central domain DNK48_RS33620 PF01493 GXGXG motif DNK48_RS33620 PF01645 Conserved region in glutamate synthase DNK48_RS33620 PF00310 Glutamine amidotransferases class-II DNK48_RS33625 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS33625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DNK48_RS33630 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS33635 PF00005 ABC transporter DNK48_RS33650 PF01243 Pyridoxamine 5'-phosphate oxidase DNK48_RS33660 PF00089 Trypsin DNK48_RS33670 PF02153 Prephenate dehydrogenase DNK48_RS33670 PF01817 Chorismate mutase type II DNK48_RS33675 PF11838 ERAP1-like C-terminal domain DNK48_RS33675 PF01433 Peptidase family M1 domain DNK48_RS33685 PF00282 Pyridoxal-dependent decarboxylase conserved domain DNK48_RS33690 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DNK48_RS33695 PF00149 Calcineurin-like phosphoesterase DNK48_RS33695 PF02872 5'-nucleotidase, C-terminal domain DNK48_RS33700 PF00293 NUDIX domain DNK48_RS33710 PF00224 Pyruvate kinase, barrel domain DNK48_RS33710 PF02887 Pyruvate kinase, alpha/beta domain DNK48_RS33725 PF03861 ANTAR domain DNK48_RS33725 PF00072 Response regulator receiver domain DNK48_RS33730 PF00005 ABC transporter DNK48_RS33735 PF00005 ABC transporter DNK48_RS33735 PF12399 Branched-chain amino acid ATP-binding cassette transporter DNK48_RS33740 PF11862 Domain of unknown function (DUF3382) DNK48_RS33740 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS33745 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS33750 PF13458 Periplasmic binding protein DNK48_RS33760 PF03061 Thioesterase superfamily DNK48_RS33765 PF01568 Molydopterin dinucleotide binding domain DNK48_RS33765 PF00384 Molybdopterin oxidoreductase DNK48_RS33770 PF01367 5'-3' exonuclease, C-terminal SAM fold DNK48_RS33770 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DNK48_RS33770 PF00476 DNA polymerase family A DNK48_RS33815 PF01209 ubiE/COQ5 methyltransferase family DNK48_RS33825 PF00575 S1 RNA binding domain DNK48_RS33845 PF01121 Dephospho-CoA kinase DNK48_RS33895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DNK48_RS33895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DNK48_RS33900 PF03009 Glycerophosphoryl diester phosphodiesterase family DNK48_RS33905 PF04851 Type III restriction enzyme, res subunit DNK48_RS33905 PF02151 UvrB/uvrC motif DNK48_RS33905 PF17757 UvrB interaction domain DNK48_RS33905 PF12344 Ultra-violet resistance protein B DNK48_RS33905 PF00271 Helicase conserved C-terminal domain DNK48_RS33910 PF02342 TerD domain DNK48_RS33915 PF02342 TerD domain DNK48_RS33920 PF03741 Integral membrane protein TerC family DNK48_RS33925 PF07690 Major Facilitator Superfamily DNK48_RS33925 PF00083 Sugar (and other) transporter DNK48_RS33930 PF00753 Metallo-beta-lactamase superfamily DNK48_RS33940 PF17760 UvrA interaction domain DNK48_RS33940 PF17755 UvrA DNA-binding domain DNK48_RS33940 PF00005 ABC transporter DNK48_RS33950 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS33960 PF08459 UvrC Helix-hairpin-helix N-terminal DNK48_RS33960 PF02151 UvrB/uvrC motif DNK48_RS33960 PF01541 GIY-YIG catalytic domain DNK48_RS33965 PF03668 P-loop ATPase protein family DNK48_RS33970 PF01933 Uncharacterised protein family UPF0052 DNK48_RS33975 PF02650 WhiA C-terminal HTH domain DNK48_RS33975 PF10298 WhiA N-terminal LAGLIDADG-like domain DNK48_RS33975 PF14527 WhiA LAGLIDADG-like domain DNK48_RS33985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DNK48_RS33985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DNK48_RS33990 PF00162 Phosphoglycerate kinase DNK48_RS33995 PF00121 Triosephosphate isomerase DNK48_RS34000 PF03840 Preprotein translocase SecG subunit DNK48_RS34015 PF00342 Phosphoglucose isomerase DNK48_RS34030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DNK48_RS34030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DNK48_RS34035 PF00923 Transaldolase/Fructose-6-phosphate aldolase DNK48_RS34040 PF02779 Transketolase, pyrimidine binding domain DNK48_RS34040 PF00456 Transketolase, thiamine diphosphate binding domain DNK48_RS34040 PF02780 Transketolase, C-terminal domain DNK48_RS34045 PF01040 UbiA prenyltransferase family DNK48_RS34065 PF02628 Cytochrome oxidase assembly protein DNK48_RS34075 PF00005 ABC transporter DNK48_RS34075 PF13732 Domain of unknown function (DUF4162) DNK48_RS34085 PF01458 Uncharacterized protein family (UPF0051) DNK48_RS34090 PF01458 Uncharacterized protein family (UPF0051) DNK48_RS34095 PF00355 Rieske [2Fe-2S] domain DNK48_RS34100 PF00005 ABC transporter DNK48_RS34105 PF00266 Aminotransferase class-V DNK48_RS34110 PF01592 NifU-like N terminal domain DNK48_RS34115 PF01883 Iron-sulfur cluster assembly protein DNK48_RS34120 PF00893 Small Multidrug Resistance protein DNK48_RS34125 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS34130 PF14602 Hexapeptide repeat of succinyl-transferase DNK48_RS34130 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DNK48_RS34165 PF08338 Domain of unknown function (DUF1731) DNK48_RS34165 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS34185 PF07690 Major Facilitator Superfamily DNK48_RS34190 PF00857 Isochorismatase family DNK48_RS34195 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS34200 PF00701 Dihydrodipicolinate synthetase family DNK48_RS34220 PF07729 FCD domain DNK48_RS34220 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS34225 PF00701 Dihydrodipicolinate synthetase family DNK48_RS34230 PF00920 Dehydratase family DNK48_RS34235 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS34240 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS34260 PF01522 Polysaccharide deacetylase DNK48_RS34270 PF00860 Permease family DNK48_RS34275 PF00248 Aldo/keto reductase family DNK48_RS34280 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS34280 PF00072 Response regulator receiver domain DNK48_RS34285 PF07730 Histidine kinase DNK48_RS34295 PF01614 Bacterial transcriptional regulator DNK48_RS34295 PF09339 IclR helix-turn-helix domain DNK48_RS34300 PF00171 Aldehyde dehydrogenase family DNK48_RS34305 PF00266 Aminotransferase class-V DNK48_RS34310 PF05721 Phytanoyl-CoA dioxygenase (PhyH) DNK48_RS34315 PF06339 Ectoine synthase DNK48_RS34320 PF00202 Aminotransferase class-III DNK48_RS34325 PF00583 Acetyltransferase (GNAT) family DNK48_RS34335 PF08281 Sigma-70, region 4 DNK48_RS34335 PF04542 Sigma-70 region 2 DNK48_RS34340 PF01979 Amidohydrolase family DNK48_RS34350 PF00155 Aminotransferase class I and II DNK48_RS34360 PF01903 CbiX DNK48_RS34370 PF07685 CobB/CobQ-like glutamine amidotransferase domain DNK48_RS34370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DNK48_RS34375 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DNK48_RS34375 PF12557 Cob(I)alamin adenosyltransferase N terminal DNK48_RS34380 PF13519 von Willebrand factor type A domain DNK48_RS34380 PF17863 AAA lid domain DNK48_RS34380 PF07728 AAA domain (dynein-related subfamily) DNK48_RS34385 PF07685 CobB/CobQ-like glutamine amidotransferase domain DNK48_RS34385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DNK48_RS34400 PF01384 Phosphate transporter family DNK48_RS34405 PF00596 Class II Aldolase and Adducin N-terminal domain DNK48_RS34420 PF16326 ABC transporter C-terminal domain DNK48_RS34420 PF12848 ABC transporter DNK48_RS34420 PF00005 ABC transporter DNK48_RS34430 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS34440 PF00672 HAMP domain DNK48_RS34440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS34440 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS34440 PF01627 Hpt domain DNK48_RS34440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DNK48_RS34440 PF00072 Response regulator receiver domain DNK48_RS34445 PF00990 Diguanylate cyclase, GGDEF domain DNK48_RS34445 PF00072 Response regulator receiver domain DNK48_RS34455 PF03780 Asp23 family, cell envelope-related function DNK48_RS34485 PF00723 Glycosyl hydrolases family 15 DNK48_RS34500 PF14480 DNA polymerase III polC-type N-terminus I DNK48_RS34500 PF11490 DNA polymerase III polC-type N-terminus II DNK48_RS34500 PF00929 Exonuclease DNK48_RS34500 PF02811 PHP domain DNK48_RS34500 PF14579 Helix-hairpin-helix motif DNK48_RS34500 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNK48_RS34500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNK48_RS34510 PF04116 Fatty acid hydroxylase superfamily DNK48_RS34525 PF00082 Subtilase family DNK48_RS34525 PF05922 Peptidase inhibitor I9 DNK48_RS34535 PF00474 Sodium:solute symporter family DNK48_RS34540 PF06463 Molybdenum Cofactor Synthesis C DNK48_RS34540 PF04055 Radical SAM superfamily DNK48_RS34555 PF04226 Transglycosylase associated protein DNK48_RS34560 PF00579 tRNA synthetases class I (W and Y) DNK48_RS34560 PF01479 S4 domain DNK48_RS34625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNK48_RS34645 PF07729 FCD domain DNK48_RS34645 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS34650 PF07690 Major Facilitator Superfamily DNK48_RS34660 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS34675 PF00498 FHA domain DNK48_RS34675 PF01061 ABC-2 type transporter DNK48_RS34675 PF00005 ABC transporter DNK48_RS34680 PF01464 Transglycosylase SLT domain DNK48_RS34685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS34685 PF07730 Histidine kinase DNK48_RS34685 PF13492 GAF domain DNK48_RS34690 PF00072 Response regulator receiver domain DNK48_RS34690 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS34695 PF03777 ChpA-C DNK48_RS34705 PF00005 ABC transporter DNK48_RS34715 PF01145 SPFH domain / Band 7 family DNK48_RS34725 PF01161 Phosphatidylethanolamine-binding protein DNK48_RS34740 PF02245 Methylpurine-DNA glycosylase (MPG) DNK48_RS34780 PF18407 GCN5-related N-acetyltransferase like domain DNK48_RS34780 PF13344 Haloacid dehalogenase-like hydrolase DNK48_RS34785 PF01032 FecCD transport family DNK48_RS34790 PF01032 FecCD transport family DNK48_RS34795 PF00005 ABC transporter DNK48_RS34815 PF01479 S4 domain DNK48_RS34815 PF01728 FtsJ-like methyltransferase DNK48_RS34820 PF01513 ATP-NAD kinase DNK48_RS34825 PF02463 RecF/RecN/SMC N terminal domain DNK48_RS34830 PF00534 Glycosyl transferases group 1 DNK48_RS34830 PF13439 Glycosyltransferase Family 4 DNK48_RS34845 PF00723 Glycosyl hydrolases family 15 DNK48_RS34850 PF06418 CTP synthase N-terminus DNK48_RS34850 PF00117 Glutamine amidotransferase class-I DNK48_RS34855 PF00293 NUDIX domain DNK48_RS34860 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS34860 PF00931 NB-ARC domain DNK48_RS34860 PF03704 Bacterial transcriptional activator domain DNK48_RS34865 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DNK48_RS34865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DNK48_RS34870 PF13614 AAA domain DNK48_RS34880 PF02616 Segregation and condensation protein ScpA DNK48_RS34885 PF04079 Segregation and condensation complex subunit ScpB DNK48_RS34890 PF01479 S4 domain DNK48_RS34890 PF00849 RNA pseudouridylate synthase DNK48_RS34895 PF07736 Chorismate mutase type I DNK48_RS34900 PF02153 Prephenate dehydrogenase DNK48_RS34905 PF02224 Cytidylate kinase DNK48_RS34915 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DNK48_RS34915 PF01926 50S ribosome-binding GTPase DNK48_RS34930 PF00534 Glycosyl transferases group 1 DNK48_RS34930 PF09318 Glycosyl transferase 1 domain A DNK48_RS34945 PF00115 Cytochrome C and Quinol oxidase polypeptide I DNK48_RS34950 PF00741 Gas vesicle protein DNK48_RS34950 PF05121 Gas vesicle protein K DNK48_RS34955 PF00741 Gas vesicle protein DNK48_RS34965 PF00741 Gas vesicle protein DNK48_RS34980 PF00741 Gas vesicle protein DNK48_RS34995 PF01569 PAP2 superfamily DNK48_RS35015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS35015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS35015 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS35020 PF04472 Cell division protein SepF DNK48_RS35035 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS35040 PF00005 ABC transporter DNK48_RS35045 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNK48_RS35050 PF00089 Trypsin DNK48_RS35050 PF02983 Alpha-lytic protease prodomain DNK48_RS35055 PF01145 SPFH domain / Band 7 family DNK48_RS35060 PF02983 Alpha-lytic protease prodomain DNK48_RS35060 PF00089 Trypsin DNK48_RS35065 PF00720 Subtilisin inhibitor-like DNK48_RS35070 PF01243 Pyridoxamine 5'-phosphate oxidase DNK48_RS35075 PF14579 Helix-hairpin-helix motif DNK48_RS35075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNK48_RS35075 PF02811 PHP domain DNK48_RS35075 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNK48_RS35080 PF00817 impB/mucB/samB family DNK48_RS35080 PF11798 IMS family HHH motif DNK48_RS35080 PF11799 impB/mucB/samB family C-terminal domain DNK48_RS35090 PF02566 OsmC-like protein DNK48_RS35095 PF01047 MarR family DNK48_RS35100 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNK48_RS35100 PF18416 N-acetylglucosamine binding protein domain 2 DNK48_RS35105 PF01039 Carboxyl transferase domain DNK48_RS35125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DNK48_RS35125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DNK48_RS35150 PF02540 NAD synthase DNK48_RS35150 PF00117 Glutamine amidotransferase class-I DNK48_RS35150 PF00958 GMP synthase C terminal domain DNK48_RS35170 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS35175 PF01301 Glycosyl hydrolases family 35 DNK48_RS35185 PF00067 Cytochrome P450 DNK48_RS35190 PF08241 Methyltransferase domain DNK48_RS35190 PF12697 Alpha/beta hydrolase family DNK48_RS35200 PF01209 ubiE/COQ5 methyltransferase family DNK48_RS35240 PF14883 Hypothetical glycosyl hydrolase family 13 DNK48_RS35240 PF01522 Polysaccharide deacetylase DNK48_RS35255 PF00535 Glycosyl transferase family 2 DNK48_RS35270 PF13472 GDSL-like Lipase/Acylhydrolase family DNK48_RS35275 PF00069 Protein kinase domain DNK48_RS35275 PF03793 PASTA domain DNK48_RS35280 PF03824 High-affinity nickel-transport protein DNK48_RS35305 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS35305 PF07702 UTRA domain DNK48_RS35310 PF04209 homogentisate 1,2-dioxygenase DNK48_RS35315 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS35320 PF01568 Molydopterin dinucleotide binding domain DNK48_RS35320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNK48_RS35320 PF00384 Molybdopterin oxidoreductase DNK48_RS35325 PF03600 Citrate transporter DNK48_RS35340 PF08281 Sigma-70, region 4 DNK48_RS35340 PF04542 Sigma-70 region 2 DNK48_RS35350 PF03176 MMPL family DNK48_RS35355 PF00206 Lyase DNK48_RS35355 PF10397 Adenylosuccinate lyase C-terminus DNK48_RS35370 PF00501 AMP-binding enzyme DNK48_RS35370 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS35380 PF01494 FAD binding domain DNK48_RS35385 PF04551 GcpE protein DNK48_RS35390 PF02780 Transketolase, C-terminal domain DNK48_RS35390 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DNK48_RS35390 PF02779 Transketolase, pyrimidine binding domain DNK48_RS35395 PF00348 Polyprenyl synthetase DNK48_RS35400 PF02401 LytB protein DNK48_RS35405 PF01474 Class-II DAHP synthetase family DNK48_RS35410 PF00117 Glutamine amidotransferase class-I DNK48_RS35410 PF04715 Anthranilate synthase component I, N terminal region DNK48_RS35410 PF00425 chorismate binding enzyme DNK48_RS35420 PF01575 MaoC like domain DNK48_RS35450 PF00501 AMP-binding enzyme DNK48_RS35450 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS35455 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS35455 PF08361 MAATS-type transcriptional repressor, C-terminal region DNK48_RS35460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS35460 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS35460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS35465 PF01636 Phosphotransferase enzyme family DNK48_RS35470 PF01638 HxlR-like helix-turn-helix DNK48_RS35485 PF02656 Domain of unknown function (DUF202) DNK48_RS35490 PF00293 NUDIX domain DNK48_RS35500 PF00890 FAD binding domain DNK48_RS35505 PF01061 ABC-2 type transporter DNK48_RS35510 PF13732 Domain of unknown function (DUF4162) DNK48_RS35510 PF00005 ABC transporter DNK48_RS35540 PF00553 Cellulose binding domain DNK48_RS35540 PF01341 Glycosyl hydrolases family 6 DNK48_RS35550 PF00534 Glycosyl transferases group 1 DNK48_RS35550 PF13439 Glycosyltransferase Family 4 DNK48_RS35560 PF05368 NmrA-like family DNK48_RS35570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS35570 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS35575 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS35575 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS35580 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS35580 PF01799 [2Fe-2S] binding domain DNK48_RS35580 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNK48_RS35585 PF00925 GTP cyclohydrolase II DNK48_RS35605 PF00534 Glycosyl transferases group 1 DNK48_RS35605 PF13439 Glycosyltransferase Family 4 DNK48_RS35625 PF00106 short chain dehydrogenase DNK48_RS35645 PF02669 K+-transporting ATPase, c chain DNK48_RS35655 PF03814 Potassium-transporting ATPase A subunit DNK48_RS35685 PF00069 Protein kinase domain DNK48_RS35685 PF13360 PQQ-like domain DNK48_RS35690 PF00176 SNF2 family N-terminal domain DNK48_RS35690 PF18337 RapA N-terminal Tudor like domain DNK48_RS35690 PF12137 RNA polymerase recycling family C-terminal DNK48_RS35690 PF18339 RapA N-terminal Tudor like domain 1 DNK48_RS35690 PF00271 Helicase conserved C-terminal domain DNK48_RS35720 PF12705 PD-(D/E)XK nuclease superfamily DNK48_RS35720 PF13361 UvrD-like helicase C-terminal domain DNK48_RS35720 PF00580 UvrD/REP helicase N-terminal domain DNK48_RS35735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DNK48_RS35785 PF03781 Sulfatase-modifying factor enzyme 1 DNK48_RS35795 PF13411 MerR HTH family regulatory protein DNK48_RS35805 PF08241 Methyltransferase domain DNK48_RS35815 PF09364 XFP N-terminal domain DNK48_RS35815 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DNK48_RS35815 PF09363 XFP C-terminal domain DNK48_RS35830 PF13378 Enolase C-terminal domain-like DNK48_RS35830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS35910 PF00437 Type II/IV secretion system protein DNK48_RS35950 PF07728 AAA domain (dynein-related subfamily) DNK48_RS35950 PF08406 CbbQ/NirQ/NorQ C-terminal DNK48_RS36025 PF00459 Inositol monophosphatase family DNK48_RS36035 PF13302 Acetyltransferase (GNAT) domain DNK48_RS36100 PF01555 DNA methylase DNK48_RS36100 PF18755 Restriction Enzyme Adenine Methylase Associated DNK48_RS36115 PF07687 Peptidase dimerisation domain DNK48_RS36115 PF01546 Peptidase family M20/M25/M40 DNK48_RS36120 PF03777 ChpA-C DNK48_RS36145 PF00248 Aldo/keto reductase family DNK48_RS36150 PF00296 Luciferase-like monooxygenase DNK48_RS36160 PF01544 CorA-like Mg2+ transporter protein DNK48_RS36180 PF01406 tRNA synthetases class I (C) catalytic domain DNK48_RS36190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS36190 PF13378 Enolase C-terminal domain-like DNK48_RS36205 PF00005 ABC transporter DNK48_RS36210 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS36215 PF00248 Aldo/keto reductase family DNK48_RS36225 PF07729 FCD domain DNK48_RS36225 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS36235 PF00296 Luciferase-like monooxygenase DNK48_RS36245 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS36245 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS36255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS36260 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DNK48_RS36260 PF01266 FAD dependent oxidoreductase DNK48_RS36265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS36265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS36270 PF00230 Major intrinsic protein DNK48_RS36275 PF09339 IclR helix-turn-helix domain DNK48_RS36275 PF01614 Bacterial transcriptional regulator DNK48_RS36280 PF02965 Vitamin B12 dependent methionine synthase, activation domain DNK48_RS36280 PF02310 B12 binding domain DNK48_RS36280 PF00809 Pterin binding enzyme DNK48_RS36280 PF02607 B12 binding domain DNK48_RS36280 PF02574 Homocysteine S-methyltransferase DNK48_RS36285 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS36295 PF00072 Response regulator receiver domain DNK48_RS36295 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS36305 PF00571 CBS domain DNK48_RS36305 PF02163 Peptidase family M50 DNK48_RS36325 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS36325 PF17758 Proteasomal ATPase OB N-terminal domain DNK48_RS36325 PF16450 Proteasomal ATPase OB C-terminal domain DNK48_RS36330 PF03136 Pup-ligase protein DNK48_RS36335 PF05639 Pup-like protein DNK48_RS36340 PF00227 Proteasome subunit DNK48_RS36345 PF00227 Proteasome subunit DNK48_RS36360 PF03136 Pup-ligase protein DNK48_RS36365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DNK48_RS36365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DNK48_RS36370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DNK48_RS36375 PF13280 WYL domain DNK48_RS36395 PF02416 mttA/Hcf106 family DNK48_RS36400 PF00902 Sec-independent protein translocase protein (TatC) DNK48_RS36405 PF00270 DEAD/DEAH box helicase DNK48_RS36405 PF08148 DSHCT (NUC185) domain DNK48_RS36405 PF00271 Helicase conserved C-terminal domain DNK48_RS36425 PF08021 Siderophore-interacting FAD-binding domain DNK48_RS36425 PF04954 Siderophore-interacting protein DNK48_RS36430 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DNK48_RS36430 PF01367 5'-3' exonuclease, C-terminal SAM fold DNK48_RS36435 PF00571 CBS domain DNK48_RS36435 PF00005 ABC transporter DNK48_RS36440 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS36455 PF17754 MftR C-terminal domain DNK48_RS36455 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS36460 PF07859 alpha/beta hydrolase fold DNK48_RS36470 PF01979 Amidohydrolase family DNK48_RS36475 PF12146 Serine aminopeptidase, S33 DNK48_RS36485 PF00456 Transketolase, thiamine diphosphate binding domain DNK48_RS36495 PF02899 Phage integrase, N-terminal SAM-like domain DNK48_RS36495 PF00589 Phage integrase family DNK48_RS36545 PF05199 GMC oxidoreductase DNK48_RS36545 PF00732 GMC oxidoreductase DNK48_RS36550 PF00732 GMC oxidoreductase DNK48_RS36550 PF05199 GMC oxidoreductase DNK48_RS36555 PF00933 Glycosyl hydrolase family 3 N terminal domain DNK48_RS36560 PF08220 DeoR-like helix-turn-helix domain DNK48_RS36560 PF00455 DeoR C terminal sensor domain DNK48_RS36570 PF00815 Histidinol dehydrogenase DNK48_RS36585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS36585 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS36585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS36595 PF01565 FAD binding domain DNK48_RS36595 PF02913 FAD linked oxidases, C-terminal domain DNK48_RS36605 PF13382 Adenine deaminase C-terminal domain DNK48_RS36605 PF01979 Amidohydrolase family DNK48_RS36645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DNK48_RS36645 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36650 PF00085 Thioredoxin DNK48_RS36660 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS36670 PF13520 Amino acid permease DNK48_RS36680 PF00107 Zinc-binding dehydrogenase DNK48_RS36680 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36705 PF14765 Polyketide synthase dehydratase DNK48_RS36705 PF08659 KR domain DNK48_RS36705 PF00550 Phosphopantetheine attachment site DNK48_RS36705 PF08659 KR domain DNK48_RS36705 PF00550 Phosphopantetheine attachment site DNK48_RS36705 PF00698 Acyl transferase domain DNK48_RS36705 PF14765 Polyketide synthase dehydratase DNK48_RS36705 PF00698 Acyl transferase domain DNK48_RS36705 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS36705 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS36705 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36705 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS36705 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS36705 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS36705 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36705 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS36710 PF00698 Acyl transferase domain DNK48_RS36710 PF14765 Polyketide synthase dehydratase DNK48_RS36710 PF00698 Acyl transferase domain DNK48_RS36710 PF00550 Phosphopantetheine attachment site DNK48_RS36710 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS36710 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS36710 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS36710 PF08990 Erythronolide synthase docking DNK48_RS36710 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36710 PF08659 KR domain DNK48_RS36710 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36710 PF14765 Polyketide synthase dehydratase DNK48_RS36710 PF08659 KR domain DNK48_RS36710 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS36710 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS36710 PF08990 Erythronolide synthase docking DNK48_RS36710 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS36710 PF00550 Phosphopantetheine attachment site DNK48_RS36725 PF00698 Acyl transferase domain DNK48_RS36725 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS36725 PF14765 Polyketide synthase dehydratase DNK48_RS36725 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS36725 PF08659 KR domain DNK48_RS36725 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS36725 PF00550 Phosphopantetheine attachment site DNK48_RS36725 PF08990 Erythronolide synthase docking DNK48_RS36725 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36730 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS36730 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS36730 PF00698 Acyl transferase domain DNK48_RS36730 PF00550 Phosphopantetheine attachment site DNK48_RS36730 PF08659 KR domain DNK48_RS36730 PF08990 Erythronolide synthase docking DNK48_RS36730 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36730 PF14765 Polyketide synthase dehydratase DNK48_RS36730 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS36735 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS36735 PF00698 Acyl transferase domain DNK48_RS36735 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36735 PF08659 KR domain DNK48_RS36735 PF00550 Phosphopantetheine attachment site DNK48_RS36735 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS36735 PF14765 Polyketide synthase dehydratase DNK48_RS36735 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS36745 PF01761 3-dehydroquinate synthase DNK48_RS36750 PF01474 Class-II DAHP synthetase family DNK48_RS36755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DNK48_RS36760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS36760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS36765 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS36770 PF00480 ROK family DNK48_RS36775 PF00501 AMP-binding enzyme DNK48_RS36775 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS36780 PF01494 FAD binding domain DNK48_RS36790 PF01220 Dehydroquinase class II DNK48_RS36795 PF00107 Zinc-binding dehydrogenase DNK48_RS36795 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS36800 PF00501 AMP-binding enzyme DNK48_RS36805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNK48_RS36805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNK48_RS36815 PF01965 DJ-1/PfpI family DNK48_RS36835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS36835 PF03466 LysR substrate binding domain DNK48_RS36875 PF00550 Phosphopantetheine attachment site DNK48_RS36875 PF00501 AMP-binding enzyme DNK48_RS36875 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS36875 PF00668 Condensation domain DNK48_RS36885 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS36885 PF07729 FCD domain DNK48_RS36890 PF02310 B12 binding domain DNK48_RS36895 PF14535 AMP-binding enzyme C-terminal domain DNK48_RS36895 PF00501 AMP-binding enzyme DNK48_RS36905 PF02310 B12 binding domain DNK48_RS36905 PF01642 Methylmalonyl-CoA mutase DNK48_RS36910 PF02652 L-lactate permease DNK48_RS36920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS36920 PF03466 LysR substrate binding domain DNK48_RS36925 PF00248 Aldo/keto reductase family DNK48_RS36930 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS36930 PF02909 Tetracyclin repressor-like, C-terminal domain DNK48_RS36935 PF01494 FAD binding domain DNK48_RS36945 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS36950 PF17805 AsnC-like ligand binding domain DNK48_RS36950 PF13404 AsnC-type helix-turn-helix domain DNK48_RS36975 PF00501 AMP-binding enzyme DNK48_RS36980 PF01613 Flavin reductase like domain DNK48_RS36985 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS36990 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS37005 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS37015 PF01613 Flavin reductase like domain DNK48_RS37035 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS37035 PF00501 AMP-binding enzyme DNK48_RS37050 PF07690 Major Facilitator Superfamily DNK48_RS37055 PF00155 Aminotransferase class I and II DNK48_RS37055 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS37060 PF00289 Biotin carboxylase, N-terminal domain DNK48_RS37060 PF02785 Biotin carboxylase C-terminal domain DNK48_RS37060 PF00364 Biotin-requiring enzyme DNK48_RS37060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNK48_RS37070 PF18665 Tetracyclin repressor-like, C-terminal domain DNK48_RS37070 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS37075 PF00067 Cytochrome P450 DNK48_RS37085 PF03055 Retinal pigment epithelial membrane protein DNK48_RS37100 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS37100 PF00107 Zinc-binding dehydrogenase DNK48_RS37105 PF00149 Calcineurin-like phosphoesterase DNK48_RS37115 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS37115 PF00975 Thioesterase domain DNK48_RS37115 PF00550 Phosphopantetheine attachment site DNK48_RS37115 PF18369 Polyketide synthase dimerisation element domain DNK48_RS37115 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS37115 PF00698 Acyl transferase domain DNK48_RS37115 PF08990 Erythronolide synthase docking DNK48_RS37115 PF08659 KR domain DNK48_RS37115 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS37125 PF00931 NB-ARC domain DNK48_RS37125 PF03704 Bacterial transcriptional activator domain DNK48_RS37125 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS37135 PF01494 FAD binding domain DNK48_RS37140 PF13460 NAD(P)H-binding DNK48_RS37145 PF01474 Class-II DAHP synthetase family DNK48_RS37150 PF00072 Response regulator receiver domain DNK48_RS37150 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS37160 PF00698 Acyl transferase domain DNK48_RS37160 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS37160 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS37160 PF00550 Phosphopantetheine attachment site DNK48_RS37160 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS37160 PF08659 KR domain DNK48_RS37160 PF14765 Polyketide synthase dehydratase DNK48_RS37165 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS37165 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS37165 PF00698 Acyl transferase domain DNK48_RS37165 PF00550 Phosphopantetheine attachment site DNK48_RS37165 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS37165 PF14765 Polyketide synthase dehydratase DNK48_RS37165 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS37165 PF08659 KR domain DNK48_RS37170 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS37170 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS37170 PF08659 KR domain DNK48_RS37170 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS37170 PF14765 Polyketide synthase dehydratase DNK48_RS37170 PF00698 Acyl transferase domain DNK48_RS37170 PF00550 Phosphopantetheine attachment site DNK48_RS37170 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS37175 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS37175 PF00698 Acyl transferase domain DNK48_RS37175 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS37175 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS37175 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS37175 PF00550 Phosphopantetheine attachment site DNK48_RS37175 PF08659 KR domain DNK48_RS37175 PF14765 Polyketide synthase dehydratase DNK48_RS37215 PF07690 Major Facilitator Superfamily DNK48_RS37220 PF01596 O-methyltransferase DNK48_RS37225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS37225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS37230 PF00550 Phosphopantetheine attachment site DNK48_RS37235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS37235 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS37235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS37250 PF07690 Major Facilitator Superfamily DNK48_RS37275 PF00106 short chain dehydrogenase DNK48_RS37280 PF10566 Glycoside hydrolase 97 DNK48_RS37280 PF14508 Glycosyl-hydrolase 97 N-terminal DNK48_RS37280 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DNK48_RS37285 PF00561 alpha/beta hydrolase fold DNK48_RS37290 PF04978 Protein of unknown function (DUF664) DNK48_RS37295 PF03848 Tellurite resistance protein TehB DNK48_RS37300 PF01381 Helix-turn-helix DNK48_RS37305 PF00704 Glycosyl hydrolases family 18 DNK48_RS37315 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS37315 PF00501 AMP-binding enzyme DNK48_RS37320 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS37320 PF00501 AMP-binding enzyme DNK48_RS37325 PF00155 Aminotransferase class I and II DNK48_RS37340 PF02416 mttA/Hcf106 family DNK48_RS37345 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS37355 PF00690 Cation transporter/ATPase, N-terminus DNK48_RS37355 PF00689 Cation transporting ATPase, C-terminus DNK48_RS37360 PF01022 Bacterial regulatory protein, arsR family DNK48_RS37365 PF00561 alpha/beta hydrolase fold DNK48_RS37380 PF01645 Conserved region in glutamate synthase DNK48_RS37390 PF00106 short chain dehydrogenase DNK48_RS37400 PF01032 FecCD transport family DNK48_RS37405 PF00005 ABC transporter DNK48_RS37430 PF16177 Acetyl-coenzyme A synthetase N-terminus DNK48_RS37430 PF00501 AMP-binding enzyme DNK48_RS37430 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS37440 PF01061 ABC-2 type transporter DNK48_RS37440 PF00498 FHA domain DNK48_RS37440 PF00005 ABC transporter DNK48_RS37445 PF03176 MMPL family DNK48_RS37450 PF07730 Histidine kinase DNK48_RS37455 PF00072 Response regulator receiver domain DNK48_RS37455 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS37460 PF01494 FAD binding domain DNK48_RS37465 PF07690 Major Facilitator Superfamily DNK48_RS37500 PF00857 Isochorismatase family DNK48_RS37505 PF00561 alpha/beta hydrolase fold DNK48_RS37510 PF01494 FAD binding domain DNK48_RS37515 PF05378 Hydantoinase/oxoprolinase N-terminal region DNK48_RS37515 PF01968 Hydantoinase/oxoprolinase DNK48_RS37530 PF12697 Alpha/beta hydrolase family DNK48_RS37535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS37540 PF05448 Acetyl xylan esterase (AXE1) DNK48_RS37550 PF00106 short chain dehydrogenase DNK48_RS37560 PF17926 Tetracyclin repressor-like, C-terminal domain DNK48_RS37560 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS37565 PF00107 Zinc-binding dehydrogenase DNK48_RS37565 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS37570 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS37570 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS37570 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS37570 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS37570 PF00698 Acyl transferase domain DNK48_RS37570 PF14765 Polyketide synthase dehydratase DNK48_RS37570 PF00550 Phosphopantetheine attachment site DNK48_RS37570 PF08990 Erythronolide synthase docking DNK48_RS37570 PF08659 KR domain DNK48_RS37580 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS37585 PF01613 Flavin reductase like domain DNK48_RS37595 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS37595 PF07702 UTRA domain DNK48_RS37605 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS37615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS37615 PF13378 Enolase C-terminal domain-like DNK48_RS37630 PF00672 HAMP domain DNK48_RS37630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS37630 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS37635 PF00072 Response regulator receiver domain DNK48_RS37635 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS37640 PF05145 Transition state regulatory protein AbrB DNK48_RS37645 PF09335 SNARE associated Golgi protein DNK48_RS37650 PF00072 Response regulator receiver domain DNK48_RS37650 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS37655 PF00672 HAMP domain DNK48_RS37655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS37655 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS37685 PF01925 Sulfite exporter TauE/SafE DNK48_RS37690 PF02583 Metal-sensitive transcriptional repressor DNK48_RS37695 PF00581 Rhodanese-like domain DNK48_RS37695 PF11127 Protein of unknown function (DUF2892) DNK48_RS37710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS37710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS37720 PF00067 Cytochrome P450 DNK48_RS37730 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS37730 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS37730 PF08990 Erythronolide synthase docking DNK48_RS37730 PF00698 Acyl transferase domain DNK48_RS37730 PF08659 KR domain DNK48_RS37730 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS37730 PF00550 Phosphopantetheine attachment site DNK48_RS37730 PF00975 Thioesterase domain DNK48_RS37740 PF01979 Amidohydrolase family DNK48_RS37760 PF13460 NAD(P)H-binding DNK48_RS37770 PF17754 MftR C-terminal domain DNK48_RS37770 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS37775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS37775 PF03466 LysR substrate binding domain DNK48_RS37810 PF08274 PhnA Zinc-Ribbon DNK48_RS37810 PF03831 PhnA domain DNK48_RS37830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS37830 PF03466 LysR substrate binding domain DNK48_RS37850 PF05721 Phytanoyl-CoA dioxygenase (PhyH) DNK48_RS37855 PF08659 KR domain DNK48_RS37855 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS37855 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS37855 PF00698 Acyl transferase domain DNK48_RS37855 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS37855 PF08990 Erythronolide synthase docking DNK48_RS37855 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS37855 PF00550 Phosphopantetheine attachment site DNK48_RS37855 PF14765 Polyketide synthase dehydratase DNK48_RS37860 PF01965 DJ-1/PfpI family DNK48_RS37875 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS37875 PF00072 Response regulator receiver domain DNK48_RS37880 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DNK48_RS37880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS37880 PF00672 HAMP domain DNK48_RS37880 PF07730 Histidine kinase DNK48_RS37940 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS37945 PF01593 Flavin containing amine oxidoreductase DNK48_RS37950 PF01968 Hydantoinase/oxoprolinase DNK48_RS37950 PF05378 Hydantoinase/oxoprolinase N-terminal region DNK48_RS37970 PF12697 Alpha/beta hydrolase family DNK48_RS37985 PF01042 Endoribonuclease L-PSP DNK48_RS38000 PF08946 Osmosensory transporter coiled coil DNK48_RS38000 PF00083 Sugar (and other) transporter DNK48_RS38005 PF03466 LysR substrate binding domain DNK48_RS38005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS38010 PF00582 Universal stress protein family DNK48_RS38030 PF03466 LysR substrate binding domain DNK48_RS38030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS38035 PF02311 AraC-like ligand binding domain DNK48_RS38035 PF12833 Helix-turn-helix domain DNK48_RS38040 PF10996 Beta-Casp domain DNK48_RS38040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DNK48_RS38040 PF00753 Metallo-beta-lactamase superfamily DNK48_RS38045 PF00561 alpha/beta hydrolase fold DNK48_RS38060 PF17101 Stealth protein CR1, conserved region 1 DNK48_RS38060 PF00534 Glycosyl transferases group 1 DNK48_RS38060 PF17102 Stealth protein CR3, conserved region 3 DNK48_RS38060 PF17103 Stealth protein CR4, conserved region 4 DNK48_RS38060 PF11380 Stealth protein CR2, conserved region 2 DNK48_RS38065 PF02673 Bacitracin resistance protein BacA DNK48_RS38080 PF07690 Major Facilitator Superfamily DNK48_RS38085 PF09335 SNARE associated Golgi protein DNK48_RS38090 PF01425 Amidase DNK48_RS38095 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS38100 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS38100 PF07729 FCD domain DNK48_RS38105 PF00155 Aminotransferase class I and II DNK48_RS38110 PF01968 Hydantoinase/oxoprolinase DNK48_RS38110 PF05378 Hydantoinase/oxoprolinase N-terminal region DNK48_RS38115 PF02538 Hydantoinase B/oxoprolinase DNK48_RS38120 PF07690 Major Facilitator Superfamily DNK48_RS38125 PF00857 Isochorismatase family DNK48_RS38140 PF01638 HxlR-like helix-turn-helix DNK48_RS38145 PF03601 Conserved hypothetical protein 698 DNK48_RS38150 PF03466 LysR substrate binding domain DNK48_RS38150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS38160 PF08361 MAATS-type transcriptional repressor, C-terminal region DNK48_RS38160 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS38205 PF00106 short chain dehydrogenase DNK48_RS38220 PF08281 Sigma-70, region 4 DNK48_RS38220 PF04542 Sigma-70 region 2 DNK48_RS38225 PF03795 YCII-related domain DNK48_RS38235 PF00300 Histidine phosphatase superfamily (branch 1) DNK48_RS38240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS38245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS38245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS38250 PF08220 DeoR-like helix-turn-helix domain DNK48_RS38250 PF05573 NosL DNK48_RS38260 PF07690 Major Facilitator Superfamily DNK48_RS38265 PF00455 DeoR C terminal sensor domain DNK48_RS38265 PF08220 DeoR-like helix-turn-helix domain DNK48_RS38270 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS38275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS38275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS38275 PF01842 ACT domain DNK48_RS38280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS38280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS38285 PF02734 DAK2 domain DNK48_RS38285 PF02733 Dak1 domain DNK48_RS38290 PF02502 Ribose/Galactose Isomerase DNK48_RS38305 PF00107 Zinc-binding dehydrogenase DNK48_RS38305 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS38310 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS38310 PF16925 Tetracyclin repressor-like, C-terminal domain DNK48_RS38350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS38350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS38360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS38360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS38365 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS38370 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS38395 PF07470 Glycosyl Hydrolase Family 88 DNK48_RS38410 PF08241 Methyltransferase domain DNK48_RS38440 PF00722 Glycosyl hydrolases family 16 DNK48_RS38455 PF13378 Enolase C-terminal domain-like DNK48_RS38455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS38460 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS38465 PF02653 Branched-chain amino acid transport system / permease component DNK48_RS38470 PF00005 ABC transporter DNK48_RS38475 PF07729 FCD domain DNK48_RS38475 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS38485 PF01638 HxlR-like helix-turn-helix DNK48_RS38515 PF00704 Glycosyl hydrolases family 18 DNK48_RS38515 PF00041 Fibronectin type III domain DNK48_RS38515 PF02018 Carbohydrate binding domain DNK48_RS38525 PF07730 Histidine kinase DNK48_RS38525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS38530 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS38530 PF00072 Response regulator receiver domain DNK48_RS38550 PF00326 Prolyl oligopeptidase family DNK48_RS38565 PF01565 FAD binding domain DNK48_RS38565 PF08031 Berberine and berberine like DNK48_RS38575 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS38575 PF18665 Tetracyclin repressor-like, C-terminal domain DNK48_RS38585 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS38590 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS38590 PF13977 BetI-type transcriptional repressor, C-terminal DNK48_RS38600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS38600 PF00672 HAMP domain DNK48_RS38600 PF00512 His Kinase A (phospho-acceptor) domain DNK48_RS38605 PF00072 Response regulator receiver domain DNK48_RS38605 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS38610 PF00083 Sugar (and other) transporter DNK48_RS38620 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS38625 PF00005 ABC transporter DNK48_RS38635 PF00296 Luciferase-like monooxygenase DNK48_RS38640 PF00296 Luciferase-like monooxygenase DNK48_RS38650 PF00465 Iron-containing alcohol dehydrogenase DNK48_RS38665 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNK48_RS38685 PF00069 Protein kinase domain DNK48_RS38705 PF02627 Carboxymuconolactone decarboxylase family DNK48_RS38710 PF04542 Sigma-70 region 2 DNK48_RS38710 PF12680 SnoaL-like domain DNK48_RS38710 PF08281 Sigma-70, region 4 DNK48_RS38720 PF01032 FecCD transport family DNK48_RS38725 PF00005 ABC transporter DNK48_RS38730 PF01568 Molydopterin dinucleotide binding domain DNK48_RS38730 PF00384 Molybdopterin oxidoreductase DNK48_RS38730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNK48_RS38735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS38740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS38740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS38750 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS38755 PF01494 FAD binding domain DNK48_RS38760 PF12697 Alpha/beta hydrolase family DNK48_RS38765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNK48_RS38775 PF01494 FAD binding domain DNK48_RS38780 PF00501 AMP-binding enzyme DNK48_RS38780 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS38795 PF01042 Endoribonuclease L-PSP DNK48_RS38810 PF00205 Thiamine pyrophosphate enzyme, central domain DNK48_RS38810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNK48_RS38810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNK48_RS38815 PF01593 Flavin containing amine oxidoreductase DNK48_RS38830 PF00248 Aldo/keto reductase family DNK48_RS38835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS38835 PF03466 LysR substrate binding domain DNK48_RS38845 PF07690 Major Facilitator Superfamily DNK48_RS38855 PF00248 Aldo/keto reductase family DNK48_RS38870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNK48_RS38875 PF12833 Helix-turn-helix domain DNK48_RS38875 PF14525 AraC-binding-like domain DNK48_RS38885 PF00106 short chain dehydrogenase DNK48_RS38910 PF13649 Methyltransferase domain DNK48_RS38930 PF16363 GDP-mannose 4,6 dehydratase DNK48_RS38935 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS38940 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS38950 PF01614 Bacterial transcriptional regulator DNK48_RS38950 PF09339 IclR helix-turn-helix domain DNK48_RS38955 PF13378 Enolase C-terminal domain-like DNK48_RS38955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS38960 PF18496 Collagenase G catalytic helper subdomain DNK48_RS38960 PF01752 Collagenase DNK48_RS38960 PF08453 Peptidase family M9 N-terminal DNK48_RS38990 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS38995 PF01266 FAD dependent oxidoreductase DNK48_RS39000 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS39000 PF07702 UTRA domain DNK48_RS39005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS39005 PF03466 LysR substrate binding domain DNK48_RS39010 PF00202 Aminotransferase class-III DNK48_RS39015 PF00005 ABC transporter DNK48_RS39025 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DNK48_RS39025 PF07730 Histidine kinase DNK48_RS39025 PF00672 HAMP domain DNK48_RS39025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS39035 PF07732 Multicopper oxidase DNK48_RS39035 PF07731 Multicopper oxidase DNK48_RS39040 PF01384 Phosphate transporter family DNK48_RS39050 PF03976 Polyphosphate kinase 2 (PPK2) DNK48_RS39065 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS39080 PF00884 Sulfatase DNK48_RS39080 PF16347 Domain of unknown function (DUF4976) DNK48_RS39085 PF00296 Luciferase-like monooxygenase DNK48_RS39100 PF02082 Transcriptional regulator DNK48_RS39110 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNK48_RS39135 PF00005 ABC transporter DNK48_RS39140 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS39145 PF01894 Uncharacterised protein family UPF0047 DNK48_RS39150 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DNK48_RS39160 PF00768 D-alanyl-D-alanine carboxypeptidase DNK48_RS39165 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS39170 PF10282 Lactonase, 7-bladed beta-propeller DNK48_RS39190 PF03167 Uracil DNA glycosylase superfamily DNK48_RS39200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNK48_RS39205 PF01022 Bacterial regulatory protein, arsR family DNK48_RS39210 PF00860 Permease family DNK48_RS39215 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS39230 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS39235 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS39245 PF00067 Cytochrome P450 DNK48_RS39255 PF01761 3-dehydroquinate synthase DNK48_RS39265 PF01596 O-methyltransferase DNK48_RS39270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNK48_RS39270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNK48_RS39275 PF00550 Phosphopantetheine attachment site DNK48_RS39280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS39280 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS39280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS39290 PF02543 Carbamoyltransferase N-terminus DNK48_RS39290 PF16861 Carbamoyltransferase C-terminus DNK48_RS39300 PF01494 FAD binding domain DNK48_RS39305 PF00797 N-acetyltransferase DNK48_RS39310 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS39310 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS39310 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS39310 PF00698 Acyl transferase domain DNK48_RS39310 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS39310 PF08659 KR domain DNK48_RS39310 PF00550 Phosphopantetheine attachment site DNK48_RS39310 PF14765 Polyketide synthase dehydratase DNK48_RS39315 PF00975 Thioesterase domain DNK48_RS39315 PF08990 Erythronolide synthase docking DNK48_RS39315 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS39315 PF00550 Phosphopantetheine attachment site DNK48_RS39315 PF18369 Polyketide synthase dimerisation element domain DNK48_RS39315 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS39315 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS39315 PF08659 KR domain DNK48_RS39315 PF00698 Acyl transferase domain DNK48_RS39325 PF00561 alpha/beta hydrolase fold DNK48_RS39330 PF02655 ATP-grasp domain DNK48_RS39330 PF00206 Lyase DNK48_RS39340 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS39345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS39345 PF13378 Enolase C-terminal domain-like DNK48_RS39350 PF07690 Major Facilitator Superfamily DNK48_RS39360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS39365 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS39370 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS39370 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS39375 PF09383 NIL domain DNK48_RS39375 PF00005 ABC transporter DNK48_RS39380 PF01810 LysE type translocator DNK48_RS39405 PF05726 Pirin C-terminal cupin domain DNK48_RS39405 PF02678 Pirin DNK48_RS39415 PF03060 Nitronate monooxygenase DNK48_RS39420 PF00501 AMP-binding enzyme DNK48_RS39420 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS39425 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS39430 PF02515 CoA-transferase family III DNK48_RS39435 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS39440 PF00682 HMGL-like DNK48_RS39445 PF12802 MarR family DNK48_RS39450 PF07690 Major Facilitator Superfamily DNK48_RS39455 PF01569 PAP2 superfamily DNK48_RS39530 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS39530 PF17925 Tetracyclin repressor-like, C-terminal domain DNK48_RS39570 PF03009 Glycerophosphoryl diester phosphodiesterase family DNK48_RS39585 PF01212 Beta-eliminating lyase DNK48_RS39590 PF01553 Acyltransferase DNK48_RS39605 PF01012 Electron transfer flavoprotein domain DNK48_RS39610 PF00766 Electron transfer flavoprotein FAD-binding domain DNK48_RS39610 PF01012 Electron transfer flavoprotein domain DNK48_RS39635 PF00561 alpha/beta hydrolase fold DNK48_RS39645 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS39650 PF00480 ROK family DNK48_RS39655 PF00069 Protein kinase domain DNK48_RS39655 PF14032 PknH-like extracellular domain DNK48_RS39660 PF17801 Alpha galactosidase C-terminal beta sandwich domain DNK48_RS39660 PF16499 Alpha galactosidase A DNK48_RS39670 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS39675 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS39685 PF07687 Peptidase dimerisation domain DNK48_RS39685 PF01546 Peptidase family M20/M25/M40 DNK48_RS39690 PF01134 Glucose inhibited division protein A DNK48_RS39690 PF13932 GidA associated domain DNK48_RS39705 PF00072 Response regulator receiver domain DNK48_RS39705 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS39730 PF07690 Major Facilitator Superfamily DNK48_RS39735 PF01325 Iron dependent repressor, N-terminal DNA binding domain DNK48_RS39735 PF00480 ROK family DNK48_RS39760 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS39770 PF08220 DeoR-like helix-turn-helix domain DNK48_RS39770 PF00455 DeoR C terminal sensor domain DNK48_RS39780 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS39780 PF17866 AAA lid domain DNK48_RS39790 PF07730 Histidine kinase DNK48_RS39790 PF13492 GAF domain DNK48_RS39790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS39790 PF13185 GAF domain DNK48_RS39795 PF00582 Universal stress protein family DNK48_RS39810 PF00072 Response regulator receiver domain DNK48_RS39810 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS39830 PF01177 Asp/Glu/Hydantoin racemase DNK48_RS39845 PF00293 NUDIX domain DNK48_RS39860 PF00083 Sugar (and other) transporter DNK48_RS39870 PF00067 Cytochrome P450 DNK48_RS39875 PF00067 Cytochrome P450 DNK48_RS39880 PF00067 Cytochrome P450 DNK48_RS39890 PF00348 Polyprenyl synthetase DNK48_RS39895 PF00391 PEP-utilising enzyme, mobile domain DNK48_RS39895 PF03610 PTS system fructose IIA component DNK48_RS39895 PF05524 PEP-utilising enzyme, N-terminal DNK48_RS39895 PF00381 PTS HPr component phosphorylation site DNK48_RS39900 PF02734 DAK2 domain DNK48_RS39905 PF02733 Dak1 domain DNK48_RS39920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS39920 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS39920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS39925 PF17755 UvrA DNA-binding domain DNK48_RS39925 PF17760 UvrA interaction domain DNK48_RS39925 PF00005 ABC transporter DNK48_RS39960 PF03060 Nitronate monooxygenase DNK48_RS39965 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS39965 PF00501 AMP-binding enzyme DNK48_RS39970 PF01817 Chorismate mutase type II DNK48_RS39980 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS39980 PF00501 AMP-binding enzyme DNK48_RS39985 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS40010 PF00501 AMP-binding enzyme DNK48_RS40060 PF13579 Glycosyl transferase 4-like domain DNK48_RS40060 PF00534 Glycosyl transferases group 1 DNK48_RS40070 PF05378 Hydantoinase/oxoprolinase N-terminal region DNK48_RS40070 PF01968 Hydantoinase/oxoprolinase DNK48_RS40080 PF02467 Transcription factor WhiB DNK48_RS40085 PF02626 Carboxyltransferase domain, subdomain A and B DNK48_RS40090 PF02682 Carboxyltransferase domain, subdomain C and D DNK48_RS40095 PF03746 LamB/YcsF family DNK48_RS40115 PF01470 Pyroglutamyl peptidase DNK48_RS40145 PF00171 Aldehyde dehydrogenase family DNK48_RS40150 PF00355 Rieske [2Fe-2S] domain DNK48_RS40150 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DNK48_RS40160 PF01571 Aminomethyltransferase folate-binding domain DNK48_RS40160 PF16350 FAD dependent oxidoreductase central domain DNK48_RS40160 PF08669 Glycine cleavage T-protein C-terminal barrel domain DNK48_RS40160 PF01266 FAD dependent oxidoreductase DNK48_RS40165 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS40165 PF00107 Zinc-binding dehydrogenase DNK48_RS40175 PF00355 Rieske [2Fe-2S] domain DNK48_RS40180 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS40180 PF14759 Reductase C-terminal DNK48_RS40195 PF03259 Roadblock/LC7 domain DNK48_RS40210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS40210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS40215 PF00230 Major intrinsic protein DNK48_RS40230 PF08402 TOBE domain DNK48_RS40230 PF00005 ABC transporter DNK48_RS40235 PF13416 Bacterial extracellular solute-binding protein DNK48_RS40240 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS40245 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS40250 PF01427 D-ala-D-ala dipeptidase DNK48_RS40255 PF13802 Galactose mutarotase-like DNK48_RS40255 PF16338 Domain of unknown function (DUF4968) DNK48_RS40255 PF01055 Glycosyl hydrolases family 31 DNK48_RS40255 PF17137 Domain of unknown function (DUF5110) DNK48_RS40260 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS40260 PF00501 AMP-binding enzyme DNK48_RS40280 PF05524 PEP-utilising enzyme, N-terminal DNK48_RS40280 PF00391 PEP-utilising enzyme, mobile domain DNK48_RS40280 PF02896 PEP-utilising enzyme, TIM barrel domain DNK48_RS40285 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNK48_RS40285 PF00367 phosphotransferase system, EIIB DNK48_RS40285 PF02378 Phosphotransferase system, EIIC DNK48_RS40310 PF01066 CDP-alcohol phosphatidyltransferase DNK48_RS40315 PF00483 Nucleotidyl transferase DNK48_RS40320 PF05949 Bacterial protein of unknown function (DUF881) DNK48_RS40325 PF06947 Protein of unknown function (DUF1290) DNK48_RS40330 PF05949 Bacterial protein of unknown function (DUF881) DNK48_RS40335 PF00498 FHA domain DNK48_RS40340 PF00376 MerR family regulatory protein DNK48_RS40345 PF02577 Bifunctional nuclease DNK48_RS40350 PF13411 MerR HTH family regulatory protein DNK48_RS40355 PF00817 impB/mucB/samB family DNK48_RS40355 PF11799 impB/mucB/samB family C-terminal domain DNK48_RS40365 PF02347 Glycine cleavage system P-protein DNK48_RS40390 PF02567 Phenazine biosynthesis-like protein DNK48_RS40395 PF03551 Transcriptional regulator PadR-like family DNK48_RS40420 PF00155 Aminotransferase class I and II DNK48_RS40420 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS40430 PF03466 LysR substrate binding domain DNK48_RS40430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS40475 PF03167 Uracil DNA glycosylase superfamily DNK48_RS40485 PF13280 WYL domain DNK48_RS40485 PF08279 HTH domain DNK48_RS40500 PF12852 Cupin DNK48_RS40500 PF12833 Helix-turn-helix domain DNK48_RS40515 PF17645 Arylmalonate decarboxylase DNK48_RS40520 PF00561 alpha/beta hydrolase fold DNK48_RS40525 PF00857 Isochorismatase family DNK48_RS40535 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS40535 PF01799 [2Fe-2S] binding domain DNK48_RS40540 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS40540 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS40545 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS40545 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS40550 PF07690 Major Facilitator Superfamily DNK48_RS40555 PF01494 FAD binding domain DNK48_RS40565 PF04978 Protein of unknown function (DUF664) DNK48_RS40575 PF01494 FAD binding domain DNK48_RS40580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS40585 PF00795 Carbon-nitrogen hydrolase DNK48_RS40590 PF13581 Histidine kinase-like ATPase domain DNK48_RS40590 PF08448 PAS fold DNK48_RS40590 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS40590 PF13466 STAS domain DNK48_RS40600 PF07729 FCD domain DNK48_RS40600 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS40605 PF00324 Amino acid permease DNK48_RS40615 PF00206 Lyase DNK48_RS40615 PF10415 Fumarase C C-terminus DNK48_RS40620 PF02954 Bacterial regulatory protein, Fis family DNK48_RS40620 PF01590 GAF domain DNK48_RS40660 PF00378 Enoyl-CoA hydratase/isomerase DNK48_RS40665 PF00253 Ribosomal protein S14p/S29e DNK48_RS40670 PF00830 Ribosomal L28 family DNK48_RS40675 PF00471 Ribosomal protein L33 DNK48_RS40680 PF01197 Ribosomal protein L31 DNK48_RS40690 PF01084 Ribosomal protein S18 DNK48_RS40695 PF01545 Cation efflux family DNK48_RS40695 PF16916 Dimerisation domain of Zinc Transporter DNK48_RS40720 PF13520 Amino acid permease DNK48_RS40735 PF12706 Beta-lactamase superfamily domain DNK48_RS40750 PF03466 LysR substrate binding domain DNK48_RS40750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS40770 PF13977 BetI-type transcriptional repressor, C-terminal DNK48_RS40770 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS40775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DNK48_RS40775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DNK48_RS40775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DNK48_RS40780 PF06722 Protein of unknown function (DUF1205) DNK48_RS40785 PF07690 Major Facilitator Superfamily DNK48_RS40805 PF03816 Cell envelope-related transcriptional attenuator domain DNK48_RS40815 PF00459 Inositol monophosphatase family DNK48_RS40825 PF00768 D-alanyl-D-alanine carboxypeptidase DNK48_RS40835 PF02013 Cellulose or protein binding domain DNK48_RS40835 PF00150 Cellulase (glycosyl hydrolase family 5) DNK48_RS40840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNK48_RS40840 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS40865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS40900 PF00248 Aldo/keto reductase family DNK48_RS40920 PF03358 NADPH-dependent FMN reductase DNK48_RS40925 PF00296 Luciferase-like monooxygenase DNK48_RS40945 PF07730 Histidine kinase DNK48_RS40950 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS40950 PF00072 Response regulator receiver domain DNK48_RS40955 PF00005 ABC transporter DNK48_RS40955 PF02687 FtsX-like permease family DNK48_RS40955 PF12704 MacB-like periplasmic core domain DNK48_RS40960 PF02687 FtsX-like permease family DNK48_RS40960 PF00005 ABC transporter DNK48_RS40960 PF12704 MacB-like periplasmic core domain DNK48_RS40990 PF04264 YceI-like domain DNK48_RS41000 PF00107 Zinc-binding dehydrogenase DNK48_RS41000 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41005 PF13378 Enolase C-terminal domain-like DNK48_RS41005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS41010 PF02927 Cellulase N-terminal ig-like domain DNK48_RS41010 PF00759 Glycosyl hydrolase family 9 DNK48_RS41010 PF02018 Carbohydrate binding domain DNK48_RS41015 PF00764 Arginosuccinate synthase DNK48_RS41025 PF00128 Alpha amylase, catalytic domain DNK48_RS41030 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS41035 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS41040 PF01547 Bacterial extracellular solute-binding protein DNK48_RS41045 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS41055 PF07993 Male sterility protein DNK48_RS41055 PF00550 Phosphopantetheine attachment site DNK48_RS41055 PF00501 AMP-binding enzyme DNK48_RS41055 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS41055 PF00668 Condensation domain DNK48_RS41075 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41075 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41075 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41075 PF00698 Acyl transferase domain DNK48_RS41075 PF08659 KR domain DNK48_RS41075 PF00550 Phosphopantetheine attachment site DNK48_RS41075 PF14765 Polyketide synthase dehydratase DNK48_RS41075 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41080 PF08659 KR domain DNK48_RS41080 PF00550 Phosphopantetheine attachment site DNK48_RS41080 PF00698 Acyl transferase domain DNK48_RS41080 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41080 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41080 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41080 PF14765 Polyketide synthase dehydratase DNK48_RS41115 PF08990 Erythronolide synthase docking DNK48_RS41115 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41115 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41115 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41115 PF08659 KR domain DNK48_RS41115 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41115 PF00698 Acyl transferase domain DNK48_RS41115 PF14765 Polyketide synthase dehydratase DNK48_RS41115 PF00550 Phosphopantetheine attachment site DNK48_RS41120 PF14765 Polyketide synthase dehydratase DNK48_RS41120 PF00550 Phosphopantetheine attachment site DNK48_RS41120 PF08659 KR domain DNK48_RS41120 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41120 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41120 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41120 PF00698 Acyl transferase domain DNK48_RS41170 PF00975 Thioesterase domain DNK48_RS41170 PF00550 Phosphopantetheine attachment site DNK48_RS41170 PF08990 Erythronolide synthase docking DNK48_RS41170 PF18369 Polyketide synthase dimerisation element domain DNK48_RS41170 PF08659 KR domain DNK48_RS41170 PF00698 Acyl transferase domain DNK48_RS41170 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41170 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41170 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41175 PF00067 Cytochrome P450 DNK48_RS41180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNK48_RS41180 PF14579 Helix-hairpin-helix motif DNK48_RS41180 PF02811 PHP domain DNK48_RS41180 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNK48_RS41195 PF03466 LysR substrate binding domain DNK48_RS41195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS41210 PF01965 DJ-1/PfpI family DNK48_RS41215 PF01243 Pyridoxamine 5'-phosphate oxidase DNK48_RS41220 PF07690 Major Facilitator Superfamily DNK48_RS41230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS41230 PF03466 LysR substrate binding domain DNK48_RS41235 PF00892 EamA-like transporter family DNK48_RS41245 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS41250 PF13411 MerR HTH family regulatory protein DNK48_RS41260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS41260 PF03466 LysR substrate binding domain DNK48_RS41270 PF01494 FAD binding domain DNK48_RS41290 PF01494 FAD binding domain DNK48_RS41305 PF13085 2Fe-2S iron-sulfur cluster binding domain DNK48_RS41310 PF00890 FAD binding domain DNK48_RS41310 PF02910 Fumarate reductase flavoprotein C-term DNK48_RS41320 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS41320 PF17754 MftR C-terminal domain DNK48_RS41325 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS41335 PF00107 Zinc-binding dehydrogenase DNK48_RS41335 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41340 PF00881 Nitroreductase family DNK48_RS41345 PF00072 Response regulator receiver domain DNK48_RS41345 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS41350 PF01494 FAD binding domain DNK48_RS41355 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41355 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41355 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41355 PF00550 Phosphopantetheine attachment site DNK48_RS41355 PF14765 Polyketide synthase dehydratase DNK48_RS41355 PF00698 Acyl transferase domain DNK48_RS41355 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41355 PF08659 KR domain DNK48_RS41360 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41360 PF00550 Phosphopantetheine attachment site DNK48_RS41360 PF08990 Erythronolide synthase docking DNK48_RS41360 PF14765 Polyketide synthase dehydratase DNK48_RS41360 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41360 PF00698 Acyl transferase domain DNK48_RS41360 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41360 PF08659 KR domain DNK48_RS41360 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41370 PF00698 Acyl transferase domain DNK48_RS41370 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41370 PF14765 Polyketide synthase dehydratase DNK48_RS41370 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41370 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41370 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41370 PF08659 KR domain DNK48_RS41370 PF00550 Phosphopantetheine attachment site DNK48_RS41370 PF08990 Erythronolide synthase docking DNK48_RS41370 PF00698 Acyl transferase domain DNK48_RS41370 PF08990 Erythronolide synthase docking DNK48_RS41370 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41370 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41370 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41370 PF08659 KR domain DNK48_RS41370 PF00550 Phosphopantetheine attachment site DNK48_RS41370 PF14765 Polyketide synthase dehydratase DNK48_RS41370 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41375 PF00550 Phosphopantetheine attachment site DNK48_RS41375 PF08659 KR domain DNK48_RS41375 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS41375 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS41375 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS41375 PF00698 Acyl transferase domain DNK48_RS41375 PF14765 Polyketide synthase dehydratase DNK48_RS41380 PF00797 N-acetyltransferase DNK48_RS41390 PF00067 Cytochrome P450 DNK48_RS41400 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA DNK48_RS41405 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DNK48_RS41405 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DNK48_RS41415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS41415 PF00989 PAS fold DNK48_RS41415 PF17203 Single cache domain 3 DNK48_RS41415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS41420 PF02983 Alpha-lytic protease prodomain DNK48_RS41420 PF00089 Trypsin DNK48_RS41425 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS41440 PF04542 Sigma-70 region 2 DNK48_RS41440 PF08281 Sigma-70, region 4 DNK48_RS41445 PF13419 Haloacid dehalogenase-like hydrolase DNK48_RS41450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS41450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS41455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DNK48_RS41460 PF01220 Dehydroquinase class II DNK48_RS41465 PF00480 ROK family DNK48_RS41470 PF07739 TipAS antibiotic-recognition domain DNK48_RS41470 PF13411 MerR HTH family regulatory protein DNK48_RS41505 PF00069 Protein kinase domain DNK48_RS41505 PF13360 PQQ-like domain DNK48_RS41515 PF00004 ATPase family associated with various cellular activities (AAA) DNK48_RS41515 PF10431 C-terminal, D2-small domain, of ClpB protein DNK48_RS41515 PF02861 Clp amino terminal domain, pathogenicity island component DNK48_RS41515 PF17871 AAA lid domain DNK48_RS41515 PF07724 AAA domain (Cdc48 subfamily) DNK48_RS41545 PF00990 Diguanylate cyclase, GGDEF domain DNK48_RS41545 PF13188 PAS domain DNK48_RS41545 PF03707 Bacterial signalling protein N terminal repeat DNK48_RS41545 PF00563 EAL domain DNK48_RS41550 PF00135 Carboxylesterase family DNK48_RS41555 PF10996 Beta-Casp domain DNK48_RS41555 PF00753 Metallo-beta-lactamase superfamily DNK48_RS41555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DNK48_RS41560 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS41575 PF10437 Bacterial lipoate protein ligase C-terminus DNK48_RS41575 PF03099 Biotin/lipoate A/B protein ligase family DNK48_RS41585 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS41585 PF16925 Tetracyclin repressor-like, C-terminal domain DNK48_RS41590 PF13302 Acetyltransferase (GNAT) domain DNK48_RS41600 PF01965 DJ-1/PfpI family DNK48_RS41600 PF12833 Helix-turn-helix domain DNK48_RS41620 PF03358 NADPH-dependent FMN reductase DNK48_RS41635 PF13811 Domain of unknown function (DUF4186) DNK48_RS41645 PF00348 Polyprenyl synthetase DNK48_RS41675 PF03330 Lytic transglycolase DNK48_RS41680 PF00069 Protein kinase domain DNK48_RS41680 PF03793 PASTA domain DNK48_RS41690 PF02322 Cytochrome bd terminal oxidase subunit II DNK48_RS41695 PF01654 Cytochrome bd terminal oxidase subunit I DNK48_RS41700 PF02687 FtsX-like permease family DNK48_RS41700 PF12704 MacB-like periplasmic core domain DNK48_RS41710 PF00072 Response regulator receiver domain DNK48_RS41710 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS41715 PF03466 LysR substrate binding domain DNK48_RS41715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS41725 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS41730 PF01261 Xylose isomerase-like TIM barrel DNK48_RS41735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS41735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS41740 PF13466 STAS domain DNK48_RS41740 PF13581 Histidine kinase-like ATPase domain DNK48_RS41740 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS41740 PF08448 PAS fold DNK48_RS41745 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS41750 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS41755 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS41780 PF00884 Sulfatase DNK48_RS41780 PF16347 Domain of unknown function (DUF4976) DNK48_RS41785 PF09084 NMT1/THI5 like DNK48_RS41790 PF00005 ABC transporter DNK48_RS41795 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS41800 PF00480 ROK family DNK48_RS41805 PF03781 Sulfatase-modifying factor enzyme 1 DNK48_RS41830 PF13520 Amino acid permease DNK48_RS41835 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DNK48_RS41835 PF02278 Polysaccharide lyase family 8, super-sandwich domain DNK48_RS41835 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain DNK48_RS41840 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS41840 PF07729 FCD domain DNK48_RS41845 PF03737 Aldolase/RraA DNK48_RS41850 PF04303 PrpF protein DNK48_RS41860 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS41860 PF16859 Tetracyclin repressor-like, C-terminal domain DNK48_RS41870 PF00652 Ricin-type beta-trefoil lectin domain DNK48_RS41870 PF16483 Beta-1,3-glucanase DNK48_RS41880 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS41880 PF00107 Zinc-binding dehydrogenase DNK48_RS41885 PF00072 Response regulator receiver domain DNK48_RS41885 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS41895 PF00501 AMP-binding enzyme DNK48_RS41895 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS41900 PF00999 Sodium/hydrogen exchanger family DNK48_RS41910 PF01070 FMN-dependent dehydrogenase DNK48_RS41915 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS41935 PF00067 Cytochrome P450 DNK48_RS41950 PF00356 Bacterial regulatory proteins, lacI family DNK48_RS41955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNK48_RS41955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNK48_RS41960 PF03773 Predicted permease DNK48_RS41970 PF07859 alpha/beta hydrolase fold DNK48_RS41975 PF00920 Dehydratase family DNK48_RS41990 PF13466 STAS domain DNK48_RS41990 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS41990 PF08448 PAS fold DNK48_RS41990 PF13581 Histidine kinase-like ATPase domain DNK48_RS41995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNK48_RS41995 PF02770 Acyl-CoA dehydrogenase, middle domain DNK48_RS41995 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DNK48_RS42000 PF02082 Transcriptional regulator DNK48_RS42010 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DNK48_RS42010 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DNK48_RS42015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS42020 PF00083 Sugar (and other) transporter DNK48_RS42030 PF01593 Flavin containing amine oxidoreductase DNK48_RS42040 PF01209 ubiE/COQ5 methyltransferase family DNK48_RS42045 PF17853 GGDEF-like domain DNK48_RS42045 PF05651 Putative sugar diacid recognition DNK48_RS42045 PF13556 PucR C-terminal helix-turn-helix domain DNK48_RS42050 PF00491 Arginase family DNK48_RS42070 PF00171 Aldehyde dehydrogenase family DNK48_RS42080 PF00404 Dockerin type I domain DNK48_RS42080 PF00657 GDSL-like Lipase/Acylhydrolase DNK48_RS42085 PF10503 Esterase PHB depolymerase DNK48_RS42090 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS42090 PF00501 AMP-binding enzyme DNK48_RS42095 PF00501 AMP-binding enzyme DNK48_RS42095 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS42100 PF00155 Aminotransferase class I and II DNK48_RS42140 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS42140 PF08659 KR domain DNK48_RS42140 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS42140 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS42140 PF00698 Acyl transferase domain DNK48_RS42140 PF14765 Polyketide synthase dehydratase DNK48_RS42140 PF00550 Phosphopantetheine attachment site DNK48_RS42145 PF00698 Acyl transferase domain DNK48_RS42145 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS42145 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS42145 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS42145 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS42145 PF08659 KR domain DNK48_RS42145 PF00550 Phosphopantetheine attachment site DNK48_RS42145 PF14765 Polyketide synthase dehydratase DNK48_RS42150 PF08659 KR domain DNK48_RS42150 PF14765 Polyketide synthase dehydratase DNK48_RS42150 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS42150 PF00698 Acyl transferase domain DNK48_RS42150 PF00550 Phosphopantetheine attachment site DNK48_RS42150 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS42150 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS42150 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS42155 PF08241 Methyltransferase domain DNK48_RS42160 PF00248 Aldo/keto reductase family DNK48_RS42175 PF00005 ABC transporter DNK48_RS42180 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS42180 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS42180 PF00550 Phosphopantetheine attachment site DNK48_RS42180 PF14765 Polyketide synthase dehydratase DNK48_RS42180 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS42180 PF00698 Acyl transferase domain DNK48_RS42180 PF08659 KR domain DNK48_RS42185 PF14765 Polyketide synthase dehydratase DNK48_RS42185 PF08659 KR domain DNK48_RS42185 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS42185 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS42185 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS42185 PF00698 Acyl transferase domain DNK48_RS42185 PF00550 Phosphopantetheine attachment site DNK48_RS42190 PF00550 Phosphopantetheine attachment site DNK48_RS42195 PF00561 alpha/beta hydrolase fold DNK48_RS42200 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DNK48_RS42210 PF03773 Predicted permease DNK48_RS42220 PF00106 short chain dehydrogenase DNK48_RS42225 PF01915 Glycosyl hydrolase family 3 C-terminal domain DNK48_RS42225 PF14310 Fibronectin type III-like domain DNK48_RS42225 PF00933 Glycosyl hydrolase family 3 N terminal domain DNK48_RS42230 PF12671 Putative amidase domain DNK48_RS42235 PF00067 Cytochrome P450 DNK48_RS42250 PF13409 Glutathione S-transferase, N-terminal domain DNK48_RS42265 PF00664 ABC transporter transmembrane region DNK48_RS42265 PF00005 ABC transporter DNK48_RS42265 PF03412 Peptidase C39 family DNK48_RS42270 PF00005 ABC transporter DNK48_RS42270 PF00664 ABC transporter transmembrane region DNK48_RS42275 PF07690 Major Facilitator Superfamily DNK48_RS42285 PF00188 Cysteine-rich secretory protein family DNK48_RS42295 PF00107 Zinc-binding dehydrogenase DNK48_RS42295 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS42310 PF02350 UDP-N-acetylglucosamine 2-epimerase DNK48_RS42335 PF07555 beta-N-acetylglucosaminidase DNK48_RS42335 PF00041 Fibronectin type III domain DNK48_RS42335 PF00754 F5/8 type C domain DNK48_RS42335 PF02838 Glycosyl hydrolase family 20, domain 2 DNK48_RS42335 PF00963 Cohesin domain DNK48_RS42340 PF01494 FAD binding domain DNK48_RS42350 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS42355 PF00067 Cytochrome P450 DNK48_RS42380 PF00668 Condensation domain DNK48_RS42380 PF00550 Phosphopantetheine attachment site DNK48_RS42380 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS42380 PF00501 AMP-binding enzyme DNK48_RS42385 PF00501 AMP-binding enzyme DNK48_RS42385 PF00668 Condensation domain DNK48_RS42385 PF00550 Phosphopantetheine attachment site DNK48_RS42385 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS42390 PF00144 Beta-lactamase DNK48_RS42415 PF00106 short chain dehydrogenase DNK48_RS42420 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS42425 PF00144 Beta-lactamase DNK48_RS42440 PF04542 Sigma-70 region 2 DNK48_RS42440 PF08281 Sigma-70, region 4 DNK48_RS42445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNK48_RS42450 PF02673 Bacitracin resistance protein BacA DNK48_RS42460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNK48_RS42460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNK48_RS42465 PF01614 Bacterial transcriptional regulator DNK48_RS42465 PF09339 IclR helix-turn-helix domain DNK48_RS42475 PF00067 Cytochrome P450 DNK48_RS42480 PF03466 LysR substrate binding domain DNK48_RS42480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS42485 PF13378 Enolase C-terminal domain-like DNK48_RS42485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNK48_RS42490 PF02447 GntP family permease DNK48_RS42495 PF13378 Enolase C-terminal domain-like DNK48_RS42510 PF07971 Glycosyl hydrolase family 92 DNK48_RS42510 PF17678 Glycosyl hydrolase family 92 N-terminal domain DNK48_RS42520 PF00149 Calcineurin-like phosphoesterase DNK48_RS42520 PF16656 Purple acid Phosphatase, N-terminal domain DNK48_RS42530 PF02785 Biotin carboxylase C-terminal domain DNK48_RS42530 PF00289 Biotin carboxylase, N-terminal domain DNK48_RS42530 PF02436 Conserved carboxylase domain DNK48_RS42530 PF00364 Biotin-requiring enzyme DNK48_RS42530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNK48_RS42530 PF00682 HMGL-like DNK48_RS42535 PF00723 Glycosyl hydrolases family 15 DNK48_RS42565 PF00072 Response regulator receiver domain DNK48_RS42565 PF00196 Bacterial regulatory proteins, luxR family DNK48_RS42570 PF00924 Mechanosensitive ion channel DNK48_RS42575 PF07690 Major Facilitator Superfamily DNK48_RS42595 PF00155 Aminotransferase class I and II DNK48_RS42600 PF00348 Polyprenyl synthetase DNK48_RS42615 PF01494 FAD binding domain DNK48_RS42620 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DNK48_RS42625 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNK48_RS42625 PF18416 N-acetylglucosamine binding protein domain 2 DNK48_RS42640 PF17853 GGDEF-like domain DNK48_RS42640 PF13556 PucR C-terminal helix-turn-helix domain DNK48_RS42640 PF07905 Purine catabolism regulatory protein-like family DNK48_RS42650 PF00474 Sodium:solute symporter family DNK48_RS42665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNK48_RS42670 PF03611 PTS system sugar-specific permease component DNK48_RS42675 PF00005 ABC transporter DNK48_RS42675 PF17755 UvrA DNA-binding domain DNK48_RS42675 PF17760 UvrA interaction domain DNK48_RS42690 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS42695 PF02909 Tetracyclin repressor-like, C-terminal domain DNK48_RS42695 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS42700 PF00183 Hsp90 protein DNK48_RS42700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS42705 PF04075 F420H(2)-dependent quinone reductase DNK48_RS42720 PF01738 Dienelactone hydrolase family DNK48_RS42725 PF00355 Rieske [2Fe-2S] domain DNK48_RS42750 PF00069 Protein kinase domain DNK48_RS42750 PF03793 PASTA domain DNK48_RS42760 PF02983 Alpha-lytic protease prodomain DNK48_RS42760 PF00089 Trypsin DNK48_RS42770 PF01545 Cation efflux family DNK48_RS42790 PF01513 ATP-NAD kinase DNK48_RS42795 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS42795 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNK48_RS42795 PF01799 [2Fe-2S] binding domain DNK48_RS42800 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS42800 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS42805 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS42805 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS42810 PF00089 Trypsin DNK48_RS42810 PF02983 Alpha-lytic protease prodomain DNK48_RS42815 PF00296 Luciferase-like monooxygenase DNK48_RS42820 PF00005 ABC transporter DNK48_RS42820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS42825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNK48_RS42825 PF00005 ABC transporter DNK48_RS42830 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS42830 PF12911 N-terminal TM domain of oligopeptide transport permease C DNK48_RS42835 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS42840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNK48_RS42850 PF02082 Transcriptional regulator DNK48_RS42870 PF03848 Tellurite resistance protein TehB DNK48_RS42875 PF01757 Acyltransferase family DNK48_RS42880 PF02734 DAK2 domain DNK48_RS42880 PF02733 Dak1 domain DNK48_RS42885 PF02733 Dak1 domain DNK48_RS42890 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS42895 PF00106 short chain dehydrogenase DNK48_RS42905 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS42915 PF17284 Spermidine synthase tetramerisation domain DNK48_RS42925 PF01842 ACT domain DNK48_RS42925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNK48_RS42925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNK48_RS42935 PF00072 Response regulator receiver domain DNK48_RS42935 PF12431 Transcriptional regulator DNK48_RS42940 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNK48_RS42940 PF17203 Single cache domain 3 DNK48_RS42940 PF00989 PAS fold DNK48_RS42940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNK48_RS42945 PF00005 ABC transporter DNK48_RS42950 PF00528 Binding-protein-dependent transport system inner membrane component DNK48_RS42960 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DNK48_RS42960 PF04101 Glycosyltransferase family 28 C-terminal domain DNK48_RS42965 PF00106 short chain dehydrogenase DNK48_RS42975 PF01522 Polysaccharide deacetylase DNK48_RS42975 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DNK48_RS42980 PF00206 Lyase DNK48_RS42980 PF10415 Fumarase C C-terminus DNK48_RS42990 PF00561 alpha/beta hydrolase fold DNK48_RS43005 PF03704 Bacterial transcriptional activator domain DNK48_RS43005 PF00931 NB-ARC domain DNK48_RS43005 PF00486 Transcriptional regulatory protein, C terminal DNK48_RS43010 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DNK48_RS43015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS43015 PF03466 LysR substrate binding domain DNK48_RS43020 PF12680 SnoaL-like domain DNK48_RS43025 PF01494 FAD binding domain DNK48_RS43030 PF01384 Phosphate transporter family DNK48_RS43040 PF00805 Pentapeptide repeats (8 copies) DNK48_RS43075 PF00005 ABC transporter DNK48_RS43085 PF08448 PAS fold DNK48_RS43085 PF13466 STAS domain DNK48_RS43085 PF13581 Histidine kinase-like ATPase domain DNK48_RS43085 PF07228 Stage II sporulation protein E (SpoIIE) DNK48_RS43095 PF00067 Cytochrome P450 DNK48_RS43105 PF05506 Domain of unknown function (DUF756) DNK48_RS43105 PF04185 Phosphoesterase family DNK48_RS43110 PF04545 Sigma-70, region 4 DNK48_RS43110 PF04539 Sigma-70 region 3 DNK48_RS43110 PF04542 Sigma-70 region 2 DNK48_RS43120 PF09587 Bacterial capsule synthesis protein PGA_cap DNK48_RS43130 PF09594 Glycosyltransferase family 87 DNK48_RS43140 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNK48_RS43140 PF14759 Reductase C-terminal DNK48_RS43160 PF06029 AlkA N-terminal domain DNK48_RS43160 PF12833 Helix-turn-helix domain DNK48_RS43160 PF00730 HhH-GPD superfamily base excision DNA repair protein DNK48_RS43160 PF02805 Metal binding domain of Ada DNK48_RS43175 PF00291 Pyridoxal-phosphate dependent enzyme DNK48_RS43185 PF04231 Endonuclease I DNK48_RS43190 PF00075 RNase H DNK48_RS43200 PF00107 Zinc-binding dehydrogenase DNK48_RS43200 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS43220 PF08240 Alcohol dehydrogenase GroES-like domain DNK48_RS43220 PF00107 Zinc-binding dehydrogenase DNK48_RS43235 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DNK48_RS43235 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DNK48_RS43240 PF03450 CO dehydrogenase flavoprotein C-terminal domain DNK48_RS43240 PF00941 FAD binding domain in molybdopterin dehydrogenase DNK48_RS43245 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNK48_RS43245 PF01799 [2Fe-2S] binding domain DNK48_RS43245 PF00111 2Fe-2S iron-sulfur cluster binding domain DNK48_RS43270 PF01276 Orn/Lys/Arg decarboxylase, major domain DNK48_RS43270 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DNK48_RS43285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DNK48_RS43285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DNK48_RS43290 PF00668 Condensation domain DNK48_RS43290 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS43290 PF00501 AMP-binding enzyme DNK48_RS43290 PF00550 Phosphopantetheine attachment site DNK48_RS43305 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DNK48_RS43310 PF03621 MbtH-like protein DNK48_RS43315 PF08241 Methyltransferase domain DNK48_RS43320 PF00668 Condensation domain DNK48_RS43320 PF00550 Phosphopantetheine attachment site DNK48_RS43320 PF00501 AMP-binding enzyme DNK48_RS43320 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS43325 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS43325 PF00668 Condensation domain DNK48_RS43325 PF07993 Male sterility protein DNK48_RS43325 PF00550 Phosphopantetheine attachment site DNK48_RS43325 PF00501 AMP-binding enzyme DNK48_RS43330 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS43330 PF00550 Phosphopantetheine attachment site DNK48_RS43330 PF00668 Condensation domain DNK48_RS43330 PF00501 AMP-binding enzyme DNK48_RS43335 PF02801 Beta-ketoacyl synthase, C-terminal domain DNK48_RS43335 PF00550 Phosphopantetheine attachment site DNK48_RS43335 PF00668 Condensation domain DNK48_RS43335 PF16197 Ketoacyl-synthetase C-terminal extension DNK48_RS43335 PF00109 Beta-ketoacyl synthase, N-terminal domain DNK48_RS43335 PF00698 Acyl transferase domain DNK48_RS43340 PF00501 AMP-binding enzyme DNK48_RS43340 PF13193 AMP-binding enzyme C-terminal domain DNK48_RS43340 PF00668 Condensation domain DNK48_RS43340 PF00550 Phosphopantetheine attachment site DNK48_RS43350 PF00364 Biotin-requiring enzyme DNK48_RS43350 PF02817 e3 binding domain DNK48_RS43350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNK48_RS43360 PF00676 Dehydrogenase E1 component DNK48_RS43385 PF07690 Major Facilitator Superfamily DNK48_RS43390 PF00440 Bacterial regulatory proteins, tetR family DNK48_RS43390 PF02909 Tetracyclin repressor-like, C-terminal domain DNK48_RS43420 PF00248 Aldo/keto reductase family DNK48_RS43430 PF13411 MerR HTH family regulatory protein DNK48_RS43440 PF04072 Leucine carboxyl methyltransferase DNK48_RS43445 PF00175 Oxidoreductase NAD-binding domain DNK48_RS43445 PF00042 Globin DNK48_RS43445 PF00970 Oxidoreductase FAD-binding domain DNK48_RS43450 PF02082 Transcriptional regulator DNK48_RS43460 PF00266 Aminotransferase class-V DNK48_RS43470 PF01425 Amidase DNK48_RS43485 PF00753 Metallo-beta-lactamase superfamily DNK48_RS43490 PF01757 Acyltransferase family DNK48_RS43500 PF00248 Aldo/keto reductase family DNK48_RS43505 PF04978 Protein of unknown function (DUF664) DNK48_RS43515 PF00392 Bacterial regulatory proteins, gntR family DNK48_RS43515 PF07729 FCD domain DNK48_RS43520 PF01370 NAD dependent epimerase/dehydratase family DNK48_RS43525 PF01261 Xylose isomerase-like TIM barrel DNK48_RS43530 PF07690 Major Facilitator Superfamily DNK48_RS43535 PF07005 Sugar-binding N-terminal domain DNK48_RS43535 PF17042 Nucleotide-binding C-terminal domain DNK48_RS43540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DNK48_RS43540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNK48_RS43545 PF00106 short chain dehydrogenase DNK48_RS43550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNK48_RS43550 PF03466 LysR substrate binding domain DNK48_RS43580 PF01451 Low molecular weight phosphotyrosine protein phosphatase