locus-tag class description JYK04_RS00025 PF01609 Transposase DDE domain JYK04_RS00025 PF13613 Helix-turn-helix of DDE superfamily endonuclease JYK04_RS00070 PF01494 FAD binding domain JYK04_RS00185 PF00011 Hsp20/alpha crystallin family JYK04_RS00225 PF01965 DJ-1/PfpI family JYK04_RS00255 PF00072 Response regulator receiver domain JYK04_RS00255 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS00260 PF07730 Histidine kinase JYK04_RS00270 PF13520 Amino acid permease JYK04_RS00280 PF01638 HxlR-like helix-turn-helix JYK04_RS00285 PF07690 Major Facilitator Superfamily JYK04_RS00330 PF00067 Cytochrome P450 JYK04_RS00350 PF03551 Transcriptional regulator PadR-like family JYK04_RS00370 PF01209 ubiE/COQ5 methyltransferase family JYK04_RS00410 PF16320 Ribosomal protein L7/L12 dimerisation domain JYK04_RS00410 PF00542 Ribosomal protein L7/L12 C-terminal domain JYK04_RS00455 PF00106 short chain dehydrogenase JYK04_RS00540 PF18416 N-acetylglucosamine binding protein domain 2 JYK04_RS00540 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JYK04_RS00545 PF03423 Carbohydrate binding domain (family 25) JYK04_RS00545 PF00041 Fibronectin type III domain JYK04_RS00545 PF03065 Glycosyl hydrolase family 57 JYK04_RS00580 PF07690 Major Facilitator Superfamily JYK04_RS00655 PF16859 Tetracyclin repressor-like, C-terminal domain JYK04_RS00655 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS00660 PF00005 ABC transporter JYK04_RS00705 PF13732 Domain of unknown function (DUF4162) JYK04_RS00705 PF00005 ABC transporter JYK04_RS00725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK04_RS00725 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS00740 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS00740 PF00072 Response regulator receiver domain JYK04_RS00745 PF02868 Thermolysin metallopeptidase, alpha-helical domain JYK04_RS00745 PF01447 Thermolysin metallopeptidase, catalytic domain JYK04_RS00745 PF03413 Peptidase propeptide and YPEB domain JYK04_RS00745 PF07504 Fungalysin/Thermolysin Propeptide Motif JYK04_RS00755 PF00877 NlpC/P60 family JYK04_RS00760 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS00760 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS00770 PF03756 A-factor biosynthesis hotdog domain JYK04_RS00775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS00775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS00780 PF01494 FAD binding domain JYK04_RS00785 PF07690 Major Facilitator Superfamily JYK04_RS00795 PF01494 FAD binding domain JYK04_RS00825 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS00825 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS00825 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS00825 PF08659 KR domain JYK04_RS00825 PF00550 Phosphopantetheine attachment site JYK04_RS00825 PF14765 Polyketide synthase dehydratase JYK04_RS00825 PF00698 Acyl transferase domain JYK04_RS00825 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS00830 PF03466 LysR substrate binding domain JYK04_RS00870 PF12894 Anaphase-promoting complex subunit 4 WD40 domain JYK04_RS00870 PF00400 WD domain, G-beta repeat JYK04_RS00885 PF13443 Cro/C1-type HTH DNA-binding domain JYK04_RS00895 PF01425 Amidase JYK04_RS00955 PF03358 NADPH-dependent FMN reductase JYK04_RS00965 PF13091 PLD-like domain JYK04_RS00980 PF06722 Protein of unknown function (DUF1205) JYK04_RS01005 PF07690 Major Facilitator Superfamily JYK04_RS01170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYK04_RS01170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYK04_RS01170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYK04_RS01345 PF00011 Hsp20/alpha crystallin family JYK04_RS01360 PF05532 CsbD-like JYK04_RS01365 PF00574 Clp protease JYK04_RS01370 PF00574 Clp protease JYK04_RS01450 PF00376 MerR family regulatory protein JYK04_RS01450 PF09278 MerR, DNA binding JYK04_RS01460 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JYK04_RS01465 PF01526 Tn3 transposase DDE domain JYK04_RS01500 PF11999 Protein of unknown function (DUF3494) JYK04_RS01500 PF02368 Bacterial Ig-like domain (group 2) JYK04_RS01535 PF01022 Bacterial regulatory protein, arsR family JYK04_RS01545 PF01266 FAD dependent oxidoreductase JYK04_RS01560 PF14748 Pyrroline-5-carboxylate reductase dimerisation JYK04_RS01560 PF03807 NADP oxidoreductase coenzyme F420-dependent JYK04_RS01565 PF01526 Tn3 transposase DDE domain JYK04_RS01665 PF13340 Putative transposase of IS4/5 family (DUF4096) JYK04_RS01695 PF13649 Methyltransferase domain JYK04_RS01795 PF00575 S1 RNA binding domain JYK04_RS01805 PF04029 2-phosphosulpholactate phosphatase JYK04_RS01870 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS01870 PF00072 Response regulator receiver domain JYK04_RS01875 PF07730 Histidine kinase JYK04_RS01885 PF13460 NAD(P)H-binding JYK04_RS01890 PF01638 HxlR-like helix-turn-helix JYK04_RS01910 PF13613 Helix-turn-helix of DDE superfamily endonuclease JYK04_RS01910 PF01609 Transposase DDE domain JYK04_RS01925 PF00723 Glycosyl hydrolases family 15 JYK04_RS01930 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS01930 PF17932 Tetracyclin repressor-like, C-terminal domain JYK04_RS01965 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS01980 PF01638 HxlR-like helix-turn-helix JYK04_RS02020 PF00282 Pyridoxal-dependent decarboxylase conserved domain JYK04_RS02030 PF09017 Microbial transglutaminase JYK04_RS02060 PF00248 Aldo/keto reductase family JYK04_RS02070 PF00313 'Cold-shock' DNA-binding domain JYK04_RS02100 PF00005 ABC transporter JYK04_RS02125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK04_RS02125 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS02130 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK04_RS02155 PF17284 Spermidine synthase tetramerisation domain JYK04_RS02165 PF03466 LysR substrate binding domain JYK04_RS02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS02170 PF01979 Amidohydrolase family JYK04_RS02195 PF00069 Protein kinase domain JYK04_RS02195 PF00400 WD domain, G-beta repeat JYK04_RS02215 PF03781 Sulfatase-modifying factor enzyme 1 JYK04_RS02220 PF03583 Secretory lipase JYK04_RS02225 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS02225 PF05651 Putative sugar diacid recognition JYK04_RS02225 PF17853 GGDEF-like domain JYK04_RS02255 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS02255 PF08241 Methyltransferase domain JYK04_RS02255 PF00391 PEP-utilising enzyme, mobile domain JYK04_RS02255 PF00550 Phosphopantetheine attachment site JYK04_RS02255 PF00501 AMP-binding enzyme JYK04_RS02255 PF00668 Condensation domain JYK04_RS02255 PF00975 Thioesterase domain JYK04_RS02260 PF00550 Phosphopantetheine attachment site JYK04_RS02260 PF00668 Condensation domain JYK04_RS02260 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS02260 PF00501 AMP-binding enzyme JYK04_RS02265 PF00501 AMP-binding enzyme JYK04_RS02265 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS02265 PF00550 Phosphopantetheine attachment site JYK04_RS02270 PF00550 Phosphopantetheine attachment site JYK04_RS02270 PF00975 Thioesterase domain JYK04_RS02270 PF00501 AMP-binding enzyme JYK04_RS02270 PF00668 Condensation domain JYK04_RS02270 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS02285 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK04_RS02290 PF17103 Stealth protein CR4, conserved region 4 JYK04_RS02290 PF11380 Stealth protein CR2, conserved region 2 JYK04_RS02290 PF17101 Stealth protein CR1, conserved region 1 JYK04_RS02290 PF00534 Glycosyl transferases group 1 JYK04_RS02290 PF17102 Stealth protein CR3, conserved region 3 JYK04_RS02295 PF00501 AMP-binding enzyme JYK04_RS02295 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS02320 PF07730 Histidine kinase JYK04_RS02355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JYK04_RS02355 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS02360 PF16483 Beta-1,3-glucanase JYK04_RS02360 PF00652 Ricin-type beta-trefoil lectin domain JYK04_RS02375 PF13458 Periplasmic binding protein JYK04_RS02390 PF01799 [2Fe-2S] binding domain JYK04_RS02390 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS02405 PF00270 DEAD/DEAH box helicase JYK04_RS02405 PF00271 Helicase conserved C-terminal domain JYK04_RS02410 PF00313 'Cold-shock' DNA-binding domain JYK04_RS02420 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain JYK04_RS02420 PF02837 Glycosyl hydrolases family 2, sugar binding domain JYK04_RS02420 PF00703 Glycosyl hydrolases family 2 JYK04_RS02450 PF00264 Common central domain of tyrosinase JYK04_RS02455 PF02585 GlcNAc-PI de-N-acetylase JYK04_RS02465 PF00144 Beta-lactamase JYK04_RS02475 PF01522 Polysaccharide deacetylase JYK04_RS02520 PF00005 ABC transporter JYK04_RS02530 PF01547 Bacterial extracellular solute-binding protein JYK04_RS02535 PF00128 Alpha amylase, catalytic domain JYK04_RS02540 PF01547 Bacterial extracellular solute-binding protein JYK04_RS02545 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS02550 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS02555 PF07055 Enoyl reductase FAD binding domain JYK04_RS02555 PF12241 Trans-2-enoyl-CoA reductase catalytic region JYK04_RS02555 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JYK04_RS02575 PF00533 BRCA1 C Terminus (BRCT) domain JYK04_RS02575 PF03120 NAD-dependent DNA ligase OB-fold domain JYK04_RS02575 PF12826 Helix-hairpin-helix motif JYK04_RS02575 PF01653 NAD-dependent DNA ligase adenylation domain JYK04_RS02605 PF05368 NmrA-like family JYK04_RS02625 PF00664 ABC transporter transmembrane region JYK04_RS02625 PF00005 ABC transporter JYK04_RS02670 PF12833 Helix-turn-helix domain JYK04_RS02670 PF01965 DJ-1/PfpI family JYK04_RS02675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYK04_RS02675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYK04_RS02680 PF07690 Major Facilitator Superfamily JYK04_RS02745 PF00892 EamA-like transporter family JYK04_RS02765 PF01494 FAD binding domain JYK04_RS02770 PF00067 Cytochrome P450 JYK04_RS02780 PF13581 Histidine kinase-like ATPase domain JYK04_RS02780 PF13466 STAS domain JYK04_RS02780 PF08448 PAS fold JYK04_RS02780 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS02785 PF03900 Porphobilinogen deaminase, C-terminal domain JYK04_RS02785 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JYK04_RS02790 PF03793 PASTA domain JYK04_RS02790 PF00069 Protein kinase domain JYK04_RS02800 PF01476 LysM domain JYK04_RS02800 PF01551 Peptidase family M23 JYK04_RS02800 PF08525 Opacity-associated protein A N-terminal motif JYK04_RS02805 PF00756 Putative esterase JYK04_RS02805 PF01476 LysM domain JYK04_RS02820 PF00106 short chain dehydrogenase JYK04_RS02830 PF01494 FAD binding domain JYK04_RS02835 PF05922 Peptidase inhibitor I9 JYK04_RS02835 PF00082 Subtilase family JYK04_RS02860 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JYK04_RS02860 PF00775 Dioxygenase JYK04_RS02870 PF13581 Histidine kinase-like ATPase domain JYK04_RS02870 PF08448 PAS fold JYK04_RS02870 PF13466 STAS domain JYK04_RS02870 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS02875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JYK04_RS02875 PF00672 HAMP domain JYK04_RS02875 PF00072 Response regulator receiver domain JYK04_RS02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS02875 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS02875 PF01627 Hpt domain JYK04_RS02885 PF04542 Sigma-70 region 2 JYK04_RS02885 PF04539 Sigma-70 region 3 JYK04_RS02885 PF04545 Sigma-70, region 4 JYK04_RS02905 PF03364 Polyketide cyclase / dehydrase and lipid transport JYK04_RS02910 PF06724 Domain of Unknown Function (DUF1206) JYK04_RS02920 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK04_RS02925 PF05532 CsbD-like JYK04_RS02940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK04_RS02940 PF18029 Glyoxalase-like domain JYK04_RS03025 PF13305 Tetracyclin repressor-like, C-terminal domain JYK04_RS03025 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS03030 PF00550 Phosphopantetheine attachment site JYK04_RS03030 PF14765 Polyketide synthase dehydratase JYK04_RS03030 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS03030 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS03030 PF00107 Zinc-binding dehydrogenase JYK04_RS03030 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS03030 PF00698 Acyl transferase domain JYK04_RS03030 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS03030 PF08659 KR domain JYK04_RS03035 PF04978 Protein of unknown function (DUF664) JYK04_RS03040 PF00561 alpha/beta hydrolase fold JYK04_RS03050 PF02467 Transcription factor WhiB JYK04_RS03065 PF04539 Sigma-70 region 3 JYK04_RS03065 PF04542 Sigma-70 region 2 JYK04_RS03065 PF04545 Sigma-70, region 4 JYK04_RS03080 PF00999 Sodium/hydrogen exchanger family JYK04_RS03100 PF00403 Heavy-metal-associated domain JYK04_RS03110 PF04545 Sigma-70, region 4 JYK04_RS03110 PF04539 Sigma-70 region 3 JYK04_RS03110 PF04542 Sigma-70 region 2 JYK04_RS03130 PF00248 Aldo/keto reductase family JYK04_RS03145 PF02016 LD-carboxypeptidase N-terminal domain JYK04_RS03145 PF17676 LD-carboxypeptidase C-terminal domain JYK04_RS03155 PF07690 Major Facilitator Superfamily JYK04_RS03165 PF04978 Protein of unknown function (DUF664) JYK04_RS03170 PF06441 Epoxide hydrolase N terminus JYK04_RS03220 PF00282 Pyridoxal-dependent decarboxylase conserved domain JYK04_RS03310 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS03365 PF02146 Sir2 family JYK04_RS03375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK04_RS03375 PF00205 Thiamine pyrophosphate enzyme, central domain JYK04_RS03375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK04_RS03380 PF01645 Conserved region in glutamate synthase JYK04_RS03395 PF04029 2-phosphosulpholactate phosphatase JYK04_RS03405 PF01494 FAD binding domain JYK04_RS03410 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS03420 PF00561 alpha/beta hydrolase fold JYK04_RS03425 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS03425 PF13977 BetI-type transcriptional repressor, C-terminal JYK04_RS03435 PF01757 Acyltransferase family JYK04_RS03440 PF00720 Subtilisin inhibitor-like JYK04_RS03455 PF01042 Endoribonuclease L-PSP JYK04_RS03475 PF00857 Isochorismatase family JYK04_RS03480 PF00696 Amino acid kinase family JYK04_RS03485 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JYK04_RS03500 PF03621 MbtH-like protein JYK04_RS03515 PF09278 MerR, DNA binding JYK04_RS03515 PF00376 MerR family regulatory protein JYK04_RS03550 PF00891 O-methyltransferase domain JYK04_RS03555 PF01494 FAD binding domain JYK04_RS03560 PF00931 NB-ARC domain JYK04_RS03560 PF03704 Bacterial transcriptional activator domain JYK04_RS03560 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS03595 PF00069 Protein kinase domain JYK04_RS03615 PF12627 Probable RNA and SrmB- binding site of polymerase A JYK04_RS03615 PF01743 Poly A polymerase head domain JYK04_RS03615 PF13735 tRNA nucleotidyltransferase domain 2 putative JYK04_RS03635 PF07969 Amidohydrolase family JYK04_RS03640 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JYK04_RS03645 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS03645 PF00551 Formyl transferase JYK04_RS03645 PF02911 Formyl transferase, C-terminal domain JYK04_RS03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS03700 PF00665 Integrase core domain JYK04_RS03715 PF13466 STAS domain JYK04_RS03715 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS03715 PF13581 Histidine kinase-like ATPase domain JYK04_RS03715 PF08448 PAS fold JYK04_RS03720 PF02540 NAD synthase JYK04_RS03760 PF02611 CDP-diacylglycerol pyrophosphatase JYK04_RS03785 PF03704 Bacterial transcriptional activator domain JYK04_RS03785 PF00931 NB-ARC domain JYK04_RS03785 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS03795 PF00672 HAMP domain JYK04_RS03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS03795 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS03800 PF00072 Response regulator receiver domain JYK04_RS03800 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS03810 PF02683 Cytochrome C biogenesis protein transmembrane region JYK04_RS03815 PF08534 Redoxin JYK04_RS03820 PF02683 Cytochrome C biogenesis protein transmembrane region JYK04_RS03820 PF11412 Disulphide bond corrector protein DsbC JYK04_RS03830 PF00188 Cysteine-rich secretory protein family JYK04_RS03845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK04_RS03845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK04_RS03875 PF00753 Metallo-beta-lactamase superfamily JYK04_RS03875 PF14863 Alkyl sulfatase dimerisation JYK04_RS03875 PF14864 Alkyl sulfatase C-terminal JYK04_RS03880 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS03905 PF01494 FAD binding domain JYK04_RS03915 PF00072 Response regulator receiver domain JYK04_RS03915 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS03920 PF00672 HAMP domain JYK04_RS03920 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS03930 PF14492 Elongation Factor G, domain II JYK04_RS03930 PF03144 Elongation factor Tu domain 2 JYK04_RS03930 PF00679 Elongation factor G C-terminus JYK04_RS03930 PF00009 Elongation factor Tu GTP binding domain JYK04_RS03930 PF03764 Elongation factor G, domain IV JYK04_RS03935 PF12697 Alpha/beta hydrolase family JYK04_RS03950 PF00583 Acetyltransferase (GNAT) family JYK04_RS03960 PF03466 LysR substrate binding domain JYK04_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS03975 PF08768 Domain of unknown function (DUF1794) JYK04_RS03980 PF01522 Polysaccharide deacetylase JYK04_RS03985 PF00999 Sodium/hydrogen exchanger family JYK04_RS03995 PF12680 SnoaL-like domain JYK04_RS03995 PF04542 Sigma-70 region 2 JYK04_RS03995 PF08281 Sigma-70, region 4 JYK04_RS04000 PF01494 FAD binding domain JYK04_RS04030 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS04030 PF00107 Zinc-binding dehydrogenase JYK04_RS04035 PF01381 Helix-turn-helix JYK04_RS04045 PF02586 SOS response associated peptidase (SRAP) JYK04_RS04050 PF13492 GAF domain JYK04_RS04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS04050 PF07730 Histidine kinase JYK04_RS04050 PF13185 GAF domain JYK04_RS04055 PF00083 Sugar (and other) transporter JYK04_RS04065 PF01740 STAS domain JYK04_RS04070 PF04542 Sigma-70 region 2 JYK04_RS04070 PF04539 Sigma-70 region 3 JYK04_RS04070 PF04545 Sigma-70, region 4 JYK04_RS04080 PF00072 Response regulator receiver domain JYK04_RS04085 PF01590 GAF domain JYK04_RS04085 PF08446 PAS fold JYK04_RS04085 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS04085 PF00360 Phytochrome region JYK04_RS04090 PF00072 Response regulator receiver domain JYK04_RS04090 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS04095 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS04100 PF04686 Streptomyces sporulation and cell division protein, SsgA JYK04_RS04125 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK04_RS04140 PF01048 Phosphorylase superfamily JYK04_RS04150 PF01258 Prokaryotic dksA/traR C4-type zinc finger JYK04_RS04155 PF00487 Fatty acid desaturase JYK04_RS04160 PF04226 Transglycosylase associated protein JYK04_RS04205 PF18011 C-terminal domain found in long catalases JYK04_RS04205 PF00199 Catalase JYK04_RS04205 PF06628 Catalase-related immune-responsive JYK04_RS04240 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS04255 PF00072 Response regulator receiver domain JYK04_RS04255 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS04270 PF00005 ABC transporter JYK04_RS04275 PF00005 ABC transporter JYK04_RS04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS04285 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS04285 PF00672 HAMP domain JYK04_RS04290 PF03239 Iron permease FTR1 family JYK04_RS04295 PF04261 Dyp-type peroxidase family JYK04_RS04295 PF10518 TAT (twin-arginine translocation) pathway signal sequence JYK04_RS04300 PF13473 Cupredoxin-like domain JYK04_RS04300 PF09375 Imelysin JYK04_RS04305 PF01569 PAP2 superfamily JYK04_RS04310 PF01569 PAP2 superfamily JYK04_RS04315 PF09335 SNARE associated Golgi protein JYK04_RS04330 PF03965 Penicillinase repressor JYK04_RS04340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS04340 PF00005 ABC transporter JYK04_RS04345 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS04345 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK04_RS04350 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS04365 PF13340 Putative transposase of IS4/5 family (DUF4096) JYK04_RS04380 PF00912 Transglycosylase JYK04_RS04380 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS04385 PF12671 Putative amidase domain JYK04_RS04390 PF17074 Darcynin, domain of unknown function JYK04_RS04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS04400 PF03466 LysR substrate binding domain JYK04_RS04410 PF08719 Domain of unknown function (DUF1768) JYK04_RS04475 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS04490 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JYK04_RS04505 PF01436 NHL repeat JYK04_RS04505 PF00069 Protein kinase domain JYK04_RS04505 PF08450 SMP-30/Gluconolactonase/LRE-like region JYK04_RS04550 PF01047 MarR family JYK04_RS04565 PF00430 ATP synthase B/B' CF(0) JYK04_RS04570 PF01494 FAD binding domain JYK04_RS04575 PF01522 Polysaccharide deacetylase JYK04_RS04580 PF00296 Luciferase-like monooxygenase JYK04_RS04585 PF11954 Domain of unknown function (DUF3471) JYK04_RS04585 PF00144 Beta-lactamase JYK04_RS04590 PF09234 Domain of unknown function (DUF1963) JYK04_RS04605 PF03702 Anhydro-N-acetylmuramic acid kinase JYK04_RS04610 PF00083 Sugar (and other) transporter JYK04_RS04620 PF00005 ABC transporter JYK04_RS04620 PF03459 TOBE domain JYK04_RS04625 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS04640 PF00067 Cytochrome P450 JYK04_RS04650 PF00069 Protein kinase domain JYK04_RS04650 PF00400 WD domain, G-beta repeat JYK04_RS04660 PF01712 Deoxynucleoside kinase JYK04_RS04700 PF01156 Inosine-uridine preferring nucleoside hydrolase JYK04_RS04725 PF01790 Prolipoprotein diacylglyceryl transferase JYK04_RS04770 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK04_RS04770 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK04_RS04775 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK04_RS04775 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK04_RS04810 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS04810 PF13977 BetI-type transcriptional repressor, C-terminal JYK04_RS04815 PF00106 short chain dehydrogenase JYK04_RS04885 PF00144 Beta-lactamase JYK04_RS04895 PF00067 Cytochrome P450 JYK04_RS04910 PF07690 Major Facilitator Superfamily JYK04_RS04920 PF03055 Retinal pigment epithelial membrane protein JYK04_RS04925 PF07687 Peptidase dimerisation domain JYK04_RS04925 PF01546 Peptidase family M20/M25/M40 JYK04_RS04935 PF13520 Amino acid permease JYK04_RS04945 PF00561 alpha/beta hydrolase fold JYK04_RS04950 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS04955 PF12680 SnoaL-like domain JYK04_RS04970 PF04075 F420H(2)-dependent quinone reductase JYK04_RS04980 PF00106 short chain dehydrogenase JYK04_RS05005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS05005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS05015 PF01252 Signal peptidase (SPase) II JYK04_RS05020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS05020 PF03466 LysR substrate binding domain JYK04_RS05025 PF01276 Orn/Lys/Arg decarboxylase, major domain JYK04_RS05025 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JYK04_RS05060 PF07690 Major Facilitator Superfamily JYK04_RS05070 PF13538 UvrD-like helicase C-terminal domain JYK04_RS05100 PF00535 Glycosyl transferase family 2 JYK04_RS05105 PF00072 Response regulator receiver domain JYK04_RS05105 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS05110 PF00672 HAMP domain JYK04_RS05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS05110 PF18698 Histidine kinase sensor domain JYK04_RS05110 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS05110 PF00989 PAS fold JYK04_RS05130 PF01638 HxlR-like helix-turn-helix JYK04_RS05135 PF00561 alpha/beta hydrolase fold JYK04_RS05150 PF03466 LysR substrate binding domain JYK04_RS05150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS05170 PF00144 Beta-lactamase JYK04_RS05190 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS05195 PF03734 L,D-transpeptidase catalytic domain JYK04_RS05195 PF17964 Bacterial Ig domain JYK04_RS05200 PF00583 Acetyltransferase (GNAT) family JYK04_RS05205 PF00583 Acetyltransferase (GNAT) family JYK04_RS05245 PF00326 Prolyl oligopeptidase family JYK04_RS05245 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JYK04_RS05250 PF01594 AI-2E family transporter JYK04_RS05275 PF00561 alpha/beta hydrolase fold JYK04_RS05280 PF00248 Aldo/keto reductase family JYK04_RS05295 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JYK04_RS05305 PF07730 Histidine kinase JYK04_RS05310 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS05310 PF00072 Response regulator receiver domain JYK04_RS05315 PF00293 NUDIX domain JYK04_RS05370 PF00248 Aldo/keto reductase family JYK04_RS05405 PF03358 NADPH-dependent FMN reductase JYK04_RS05410 PF04673 Polyketide synthesis cyclase JYK04_RS05415 PF03364 Polyketide cyclase / dehydrase and lipid transport JYK04_RS05420 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS05420 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS05425 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS05425 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS05430 PF07883 Cupin domain JYK04_RS05435 PF04486 SchA/CurD like domain JYK04_RS05440 PF01494 FAD binding domain JYK04_RS05455 PF03422 Carbohydrate binding module (family 6) JYK04_RS05455 PF00457 Glycosyl hydrolases family 11 JYK04_RS05475 PF01047 MarR family JYK04_RS05480 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS05505 PF07690 Major Facilitator Superfamily JYK04_RS05520 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS05535 PF00704 Glycosyl hydrolases family 18 JYK04_RS05535 PF08329 Chitinase A, N-terminal domain JYK04_RS05545 PF04151 Bacterial pre-peptidase C-terminal domain JYK04_RS05545 PF00082 Subtilase family JYK04_RS05560 PF01751 Toprim domain JYK04_RS05560 PF00204 DNA gyrase B JYK04_RS05560 PF00986 DNA gyrase B subunit, carboxyl terminus JYK04_RS05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS05575 PF04545 Sigma-70, region 4 JYK04_RS05575 PF04542 Sigma-70 region 2 JYK04_RS05610 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS05610 PF00107 Zinc-binding dehydrogenase JYK04_RS05615 PF17645 Arylmalonate decarboxylase JYK04_RS05620 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYK04_RS05625 PF07883 Cupin domain JYK04_RS05630 PF00795 Carbon-nitrogen hydrolase JYK04_RS05635 PF01494 FAD binding domain JYK04_RS05640 PF00501 AMP-binding enzyme JYK04_RS05640 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS05650 PF07859 alpha/beta hydrolase fold JYK04_RS05665 PF00144 Beta-lactamase JYK04_RS05670 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS05675 PF00135 Carboxylesterase family JYK04_RS05690 PF01975 Survival protein SurE JYK04_RS05695 PF00135 Carboxylesterase family JYK04_RS05700 PF03848 Tellurite resistance protein TehB JYK04_RS05705 PF01425 Amidase JYK04_RS05725 PF08402 TOBE domain JYK04_RS05725 PF00005 ABC transporter JYK04_RS05745 PF07702 UTRA domain JYK04_RS05745 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS05755 PF03466 LysR substrate binding domain JYK04_RS05760 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS05760 PF00072 Response regulator receiver domain JYK04_RS05765 PF07730 Histidine kinase JYK04_RS05770 PF00005 ABC transporter JYK04_RS05775 PF12704 MacB-like periplasmic core domain JYK04_RS05775 PF00005 ABC transporter JYK04_RS05775 PF02687 FtsX-like permease family JYK04_RS05780 PF00501 AMP-binding enzyme JYK04_RS05780 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS05780 PF00668 Condensation domain JYK04_RS05780 PF00550 Phosphopantetheine attachment site JYK04_RS05780 PF00551 Formyl transferase JYK04_RS05785 PF08281 Sigma-70, region 4 JYK04_RS05785 PF04542 Sigma-70 region 2 JYK04_RS05825 PF00313 'Cold-shock' DNA-binding domain JYK04_RS05835 PF01047 MarR family JYK04_RS05840 PF00271 Helicase conserved C-terminal domain JYK04_RS05840 PF00270 DEAD/DEAH box helicase JYK04_RS05920 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS05920 PF00107 Zinc-binding dehydrogenase JYK04_RS05925 PF03483 B3/4 domain JYK04_RS05925 PF03484 tRNA synthetase B5 domain JYK04_RS05925 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JYK04_RS05925 PF03147 Ferredoxin-fold anticodon binding domain JYK04_RS05925 PF01588 Putative tRNA binding domain JYK04_RS05940 PF07690 Major Facilitator Superfamily JYK04_RS05950 PF13411 MerR HTH family regulatory protein JYK04_RS06030 PF01381 Helix-turn-helix JYK04_RS06035 PF07690 Major Facilitator Superfamily JYK04_RS06040 PF00331 Glycosyl hydrolase family 10 JYK04_RS06040 PF00942 Cellulose binding domain JYK04_RS06040 PF00150 Cellulase (glycosyl hydrolase family 5) JYK04_RS06060 PF02687 FtsX-like permease family JYK04_RS06060 PF00005 ABC transporter JYK04_RS06060 PF12704 MacB-like periplasmic core domain JYK04_RS06065 PF00720 Subtilisin inhibitor-like JYK04_RS06085 PF02146 Sir2 family JYK04_RS06095 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JYK04_RS06095 PF00535 Glycosyl transferase family 2 JYK04_RS06095 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JYK04_RS06095 PF00535 Glycosyl transferase family 2 JYK04_RS06140 PF13520 Amino acid permease JYK04_RS06150 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS06150 PF01799 [2Fe-2S] binding domain JYK04_RS06155 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK04_RS06155 PF00034 Cytochrome c JYK04_RS06155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK04_RS06180 PF00890 FAD binding domain JYK04_RS06195 PF13191 AAA ATPase domain JYK04_RS06195 PF00211 Adenylate and Guanylate cyclase catalytic domain JYK04_RS06220 PF00814 Glycoprotease family JYK04_RS06235 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS06240 PF00501 AMP-binding enzyme JYK04_RS06240 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS06245 PF04978 Protein of unknown function (DUF664) JYK04_RS06260 PF14535 AMP-binding enzyme C-terminal domain JYK04_RS06260 PF00501 AMP-binding enzyme JYK04_RS06270 PF00501 AMP-binding enzyme JYK04_RS06270 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS06275 PF01804 Penicillin amidase JYK04_RS06280 PF01699 Sodium/calcium exchanger protein JYK04_RS06285 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS06285 PF00501 AMP-binding enzyme JYK04_RS06290 PF03060 Nitronate monooxygenase JYK04_RS06320 PF01494 FAD binding domain JYK04_RS06325 PF04075 F420H(2)-dependent quinone reductase JYK04_RS06335 PF00665 Integrase core domain JYK04_RS06345 PF03793 PASTA domain JYK04_RS06345 PF00069 Protein kinase domain JYK04_RS06355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JYK04_RS06355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JYK04_RS06375 PF01740 STAS domain JYK04_RS06375 PF00916 Sulfate permease family JYK04_RS06380 PF12900 Pyridoxamine 5'-phosphate oxidase JYK04_RS06385 PF00027 Cyclic nucleotide-binding domain JYK04_RS06390 PF00571 CBS domain JYK04_RS06390 PF01368 DHH family JYK04_RS06390 PF02272 DHHA1 domain JYK04_RS06390 PF01743 Poly A polymerase head domain JYK04_RS06395 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS06395 PF00072 Response regulator receiver domain JYK04_RS06400 PF13185 GAF domain JYK04_RS06400 PF13492 GAF domain JYK04_RS06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS06400 PF07730 Histidine kinase JYK04_RS06405 PF00582 Universal stress protein family JYK04_RS06415 PF00478 IMP dehydrogenase / GMP reductase domain JYK04_RS06415 PF00571 CBS domain JYK04_RS06420 PF00571 CBS domain JYK04_RS06420 PF00478 IMP dehydrogenase / GMP reductase domain JYK04_RS06435 PF03632 Glycosyl hydrolase family 65 central catalytic domain JYK04_RS06435 PF03633 Glycosyl hydrolase family 65, C-terminal domain JYK04_RS06435 PF02358 Trehalose-phosphatase JYK04_RS06435 PF03636 Glycosyl hydrolase family 65, N-terminal domain JYK04_RS06450 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS06450 PF00107 Zinc-binding dehydrogenase JYK04_RS06450 PF13823 Alcohol dehydrogenase GroES-associated JYK04_RS06455 PF00571 CBS domain JYK04_RS06455 PF00478 IMP dehydrogenase / GMP reductase domain JYK04_RS06465 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS06465 PF17932 Tetracyclin repressor-like, C-terminal domain JYK04_RS06555 PF05175 Methyltransferase small domain JYK04_RS06555 PF17827 PrmC N-terminal domain JYK04_RS06560 PF00128 Alpha amylase, catalytic domain JYK04_RS06560 PF02806 Alpha amylase, C-terminal all-beta domain JYK04_RS06560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK04_RS06600 PF03780 Asp23 family, cell envelope-related function JYK04_RS06605 PF08281 Sigma-70, region 4 JYK04_RS06605 PF04542 Sigma-70 region 2 JYK04_RS06650 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS06660 PF00085 Thioredoxin JYK04_RS06665 PF10431 C-terminal, D2-small domain, of ClpB protein JYK04_RS06665 PF02861 Clp amino terminal domain, pathogenicity island component JYK04_RS06665 PF17871 AAA lid domain JYK04_RS06665 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS06665 PF07724 AAA domain (Cdc48 subfamily) JYK04_RS06675 PF00226 DnaJ domain JYK04_RS06675 PF01556 DnaJ C terminal domain JYK04_RS06680 PF01025 GrpE JYK04_RS06685 PF00012 Hsp70 protein JYK04_RS06690 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS06690 PF07905 Purine catabolism regulatory protein-like family JYK04_RS06730 PF00011 Hsp20/alpha crystallin family JYK04_RS06745 PF03466 LysR substrate binding domain JYK04_RS06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS06750 PF07722 Peptidase C26 JYK04_RS06760 PF00324 Amino acid permease JYK04_RS06770 PF10415 Fumarase C C-terminus JYK04_RS06770 PF00206 Lyase JYK04_RS06775 PF07883 Cupin domain JYK04_RS06785 PF00106 short chain dehydrogenase JYK04_RS06820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS06820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS06820 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS06825 PF04978 Protein of unknown function (DUF664) JYK04_RS06835 PF01116 Fructose-bisphosphate aldolase class-II JYK04_RS06845 PF08220 DeoR-like helix-turn-helix domain JYK04_RS06845 PF00455 DeoR C terminal sensor domain JYK04_RS06850 PF04389 Peptidase family M28 JYK04_RS06860 PF03466 LysR substrate binding domain JYK04_RS06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS06865 PF00155 Aminotransferase class I and II JYK04_RS06870 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS06870 PF00107 Zinc-binding dehydrogenase JYK04_RS06875 PF07859 alpha/beta hydrolase fold JYK04_RS06880 PF13649 Methyltransferase domain JYK04_RS06885 PF13581 Histidine kinase-like ATPase domain JYK04_RS06885 PF08448 PAS fold JYK04_RS06885 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS06885 PF13466 STAS domain JYK04_RS06890 PF00723 Glycosyl hydrolases family 15 JYK04_RS06895 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase JYK04_RS06895 PF00754 F5/8 type C domain JYK04_RS06895 PF13088 BNR repeat-like domain JYK04_RS06905 PF07681 DoxX JYK04_RS06940 PF01022 Bacterial regulatory protein, arsR family JYK04_RS06945 PF00892 EamA-like transporter family JYK04_RS06950 PF03466 LysR substrate binding domain JYK04_RS06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS06965 PF08406 CbbQ/NirQ/NorQ C-terminal JYK04_RS06965 PF07728 AAA domain (dynein-related subfamily) JYK04_RS06975 PF02834 LigT like Phosphoesterase JYK04_RS06985 PF00144 Beta-lactamase JYK04_RS06995 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JYK04_RS06995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JYK04_RS07010 PF13520 Amino acid permease JYK04_RS07030 PF03814 Potassium-transporting ATPase A subunit JYK04_RS07040 PF02669 K+-transporting ATPase, c chain JYK04_RS07045 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS07045 PF00072 Response regulator receiver domain JYK04_RS07050 PF13493 Domain of unknown function (DUF4118) JYK04_RS07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS07050 PF02702 Osmosensitive K+ channel His kinase sensor domain JYK04_RS07050 PF00582 Universal stress protein family JYK04_RS07050 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS07070 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS07070 PF00072 Response regulator receiver domain JYK04_RS07100 PF02733 Dak1 domain JYK04_RS07105 PF02734 DAK2 domain JYK04_RS07120 PF03459 TOBE domain JYK04_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS07140 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS07140 PF00072 Response regulator receiver domain JYK04_RS07145 PF07730 Histidine kinase JYK04_RS07165 PF14032 PknH-like extracellular domain JYK04_RS07165 PF00069 Protein kinase domain JYK04_RS07175 PF00005 ABC transporter JYK04_RS07175 PF00498 FHA domain JYK04_RS07175 PF01061 ABC-2 type transporter JYK04_RS07180 PF01545 Cation efflux family JYK04_RS07180 PF16916 Dimerisation domain of Zinc Transporter JYK04_RS07195 PF00069 Protein kinase domain JYK04_RS07210 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS07210 PF17862 AAA+ lid domain JYK04_RS07210 PF01434 Peptidase family M41 JYK04_RS07235 PF00795 Carbon-nitrogen hydrolase JYK04_RS07235 PF00535 Glycosyl transferase family 2 JYK04_RS07245 PF01494 FAD binding domain JYK04_RS07255 PF03747 ADP-ribosylglycohydrolase JYK04_RS07260 PF00005 ABC transporter JYK04_RS07265 PF01177 Asp/Glu/Hydantoin racemase JYK04_RS07270 PF00795 Carbon-nitrogen hydrolase JYK04_RS07270 PF00535 Glycosyl transferase family 2 JYK04_RS07290 PF17866 AAA lid domain JYK04_RS07290 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS07305 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS07315 PF00480 ROK family JYK04_RS07320 PF13532 2OG-Fe(II) oxygenase superfamily JYK04_RS07345 PF13305 Tetracyclin repressor-like, C-terminal domain JYK04_RS07345 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS07360 PF01494 FAD binding domain JYK04_RS07365 PF07687 Peptidase dimerisation domain JYK04_RS07365 PF01546 Peptidase family M20/M25/M40 JYK04_RS07370 PF00067 Cytochrome P450 JYK04_RS07380 PF16123 Hydroxyacylglutathione hydrolase C-terminus JYK04_RS07380 PF00753 Metallo-beta-lactamase superfamily JYK04_RS07390 PF00293 NUDIX domain JYK04_RS07395 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS07410 PF03793 PASTA domain JYK04_RS07410 PF00069 Protein kinase domain JYK04_RS07415 PF01012 Electron transfer flavoprotein domain JYK04_RS07415 PF00766 Electron transfer flavoprotein FAD-binding domain JYK04_RS07420 PF01012 Electron transfer flavoprotein domain JYK04_RS07455 PF01212 Beta-eliminating lyase JYK04_RS07470 PF00296 Luciferase-like monooxygenase JYK04_RS07480 PF03009 Glycerophosphoryl diester phosphodiesterase family JYK04_RS07505 PF01569 PAP2 superfamily JYK04_RS07510 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS07510 PF18665 Tetracyclin repressor-like, C-terminal domain JYK04_RS07525 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS07535 PF01022 Bacterial regulatory protein, arsR family JYK04_RS07540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK04_RS07545 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JYK04_RS07545 PF06974 Protein of unknown function (DUF1298) JYK04_RS07555 PF03167 Uracil DNA glycosylase superfamily JYK04_RS07565 PF10282 Lactonase, 7-bladed beta-propeller JYK04_RS07570 PF02898 Nitric oxide synthase, oxygenase domain JYK04_RS07575 PF00583 Acetyltransferase (GNAT) family JYK04_RS07590 PF12802 MarR family JYK04_RS07595 PF03704 Bacterial transcriptional activator domain JYK04_RS07595 PF00931 NB-ARC domain JYK04_RS07595 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS07610 PF00501 AMP-binding enzyme JYK04_RS07610 PF00668 Condensation domain JYK04_RS07610 PF00550 Phosphopantetheine attachment site JYK04_RS07610 PF08242 Methyltransferase domain JYK04_RS07615 PF00464 Serine hydroxymethyltransferase JYK04_RS07625 PF01212 Beta-eliminating lyase JYK04_RS07640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS07640 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS07640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS07645 PF00501 AMP-binding enzyme JYK04_RS07645 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS07645 PF00668 Condensation domain JYK04_RS07645 PF00550 Phosphopantetheine attachment site JYK04_RS07650 PF00668 Condensation domain JYK04_RS07650 PF00501 AMP-binding enzyme JYK04_RS07650 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS07650 PF00550 Phosphopantetheine attachment site JYK04_RS07655 PF00668 Condensation domain JYK04_RS07655 PF00550 Phosphopantetheine attachment site JYK04_RS07655 PF00501 AMP-binding enzyme JYK04_RS07655 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS07670 PF00668 Condensation domain JYK04_RS07670 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS07670 PF00550 Phosphopantetheine attachment site JYK04_RS07670 PF00501 AMP-binding enzyme JYK04_RS07675 PF00067 Cytochrome P450 JYK04_RS07680 PF03621 MbtH-like protein JYK04_RS07690 PF00550 Phosphopantetheine attachment site JYK04_RS07690 PF00501 AMP-binding enzyme JYK04_RS07690 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS07695 PF00171 Aldehyde dehydrogenase family JYK04_RS07705 PF04820 Tryptophan halogenase JYK04_RS07710 PF01613 Flavin reductase like domain JYK04_RS07715 PF00999 Sodium/hydrogen exchanger family JYK04_RS07730 PF00300 Histidine phosphatase superfamily (branch 1) JYK04_RS07745 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS07760 PF00067 Cytochrome P450 JYK04_RS07780 PF00005 ABC transporter JYK04_RS07780 PF00664 ABC transporter transmembrane region JYK04_RS07790 PF01565 FAD binding domain JYK04_RS07790 PF02913 FAD linked oxidases, C-terminal domain JYK04_RS07795 PF00664 ABC transporter transmembrane region JYK04_RS07795 PF00005 ABC transporter JYK04_RS07800 PF00005 ABC transporter JYK04_RS07800 PF00664 ABC transporter transmembrane region JYK04_RS07810 PF00270 DEAD/DEAH box helicase JYK04_RS07810 PF08148 DSHCT (NUC185) domain JYK04_RS07810 PF00271 Helicase conserved C-terminal domain JYK04_RS07830 PF03259 Roadblock/LC7 domain JYK04_RS07860 PF00990 Diguanylate cyclase, GGDEF domain JYK04_RS07860 PF03707 Bacterial signalling protein N terminal repeat JYK04_RS07860 PF00563 EAL domain JYK04_RS07865 PF08241 Methyltransferase domain JYK04_RS07890 PF00271 Helicase conserved C-terminal domain JYK04_RS07890 PF00176 SNF2 family N-terminal domain JYK04_RS07890 PF12419 SNF2 Helicase protein JYK04_RS07905 PF00171 Aldehyde dehydrogenase family JYK04_RS07910 PF17853 GGDEF-like domain JYK04_RS07910 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS07915 PF00175 Oxidoreductase NAD-binding domain JYK04_RS07915 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS07915 PF00970 Oxidoreductase FAD-binding domain JYK04_RS07920 PF00487 Fatty acid desaturase JYK04_RS07985 PF17864 RuvB AAA lid domain JYK04_RS07985 PF05491 RuvB C-terminal winged helix domain JYK04_RS07985 PF05496 Holliday junction DNA helicase RuvB P-loop domain JYK04_RS08025 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS08035 PF00535 Glycosyl transferase family 2 JYK04_RS08050 PF00698 Acyl transferase domain JYK04_RS08050 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS08050 PF14765 Polyketide synthase dehydratase JYK04_RS08050 PF00550 Phosphopantetheine attachment site JYK04_RS08050 PF08659 KR domain JYK04_RS08055 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS08075 PF12680 SnoaL-like domain JYK04_RS08075 PF04542 Sigma-70 region 2 JYK04_RS08075 PF08281 Sigma-70, region 4 JYK04_RS08080 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS08155 PF17758 Proteasomal ATPase OB N-terminal domain JYK04_RS08155 PF16450 Proteasomal ATPase OB C-terminal domain JYK04_RS08155 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS08170 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS08200 PF00459 Inositol monophosphatase family JYK04_RS08205 PF05199 GMC oxidoreductase JYK04_RS08205 PF00732 GMC oxidoreductase JYK04_RS08225 PF00082 Subtilase family JYK04_RS08230 PF01425 Amidase JYK04_RS08250 PF17862 AAA+ lid domain JYK04_RS08250 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS08250 PF01434 Peptidase family M41 JYK04_RS08355 PF00931 NB-ARC domain JYK04_RS08355 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS08355 PF03704 Bacterial transcriptional activator domain JYK04_RS08380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYK04_RS08405 PF02628 Cytochrome oxidase assembly protein JYK04_RS08410 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS08415 PF07690 Major Facilitator Superfamily JYK04_RS08440 PF00561 alpha/beta hydrolase fold JYK04_RS08445 PF00561 alpha/beta hydrolase fold JYK04_RS08450 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS08450 PF08448 PAS fold JYK04_RS08450 PF13581 Histidine kinase-like ATPase domain JYK04_RS08450 PF13466 STAS domain JYK04_RS08460 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS08465 PF00005 ABC transporter JYK04_RS08465 PF00571 CBS domain JYK04_RS08470 PF05199 GMC oxidoreductase JYK04_RS08470 PF00732 GMC oxidoreductase JYK04_RS08475 PF00171 Aldehyde dehydrogenase family JYK04_RS08530 PF04055 Radical SAM superfamily JYK04_RS08530 PF06969 HemN C-terminal domain JYK04_RS08545 PF00756 Putative esterase JYK04_RS08545 PF11806 Domain of unknown function (DUF3327) JYK04_RS08550 PF00664 ABC transporter transmembrane region JYK04_RS08550 PF00005 ABC transporter JYK04_RS08555 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS08555 PF00501 AMP-binding enzyme JYK04_RS08555 PF00550 Phosphopantetheine attachment site JYK04_RS08555 PF00668 Condensation domain JYK04_RS08560 PF00005 ABC transporter JYK04_RS08560 PF00664 ABC transporter transmembrane region JYK04_RS08565 PF01497 Periplasmic binding protein JYK04_RS08570 PF00005 ABC transporter JYK04_RS08575 PF01032 FecCD transport family JYK04_RS08580 PF01032 FecCD transport family JYK04_RS08590 PF03176 MMPL family JYK04_RS08595 PF00698 Acyl transferase domain JYK04_RS08595 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS08595 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS08595 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS08595 PF08659 KR domain JYK04_RS08595 PF00550 Phosphopantetheine attachment site JYK04_RS08595 PF14765 Polyketide synthase dehydratase JYK04_RS08615 PF14032 PknH-like extracellular domain JYK04_RS08615 PF00069 Protein kinase domain JYK04_RS08655 PF00069 Protein kinase domain JYK04_RS08660 PF08402 TOBE domain JYK04_RS08660 PF00005 ABC transporter JYK04_RS08670 PF00072 Response regulator receiver domain JYK04_RS08670 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS08725 PF00875 DNA photolyase JYK04_RS08725 PF03441 FAD binding domain of DNA photolyase JYK04_RS08730 PF11066 Protein of unknown function (DUF2867) JYK04_RS08730 PF13460 NAD(P)H-binding JYK04_RS08735 PF02469 Fasciclin domain JYK04_RS08740 PF04545 Sigma-70, region 4 JYK04_RS08740 PF04542 Sigma-70 region 2 JYK04_RS08745 PF10099 Anti-sigma-K factor rskA JYK04_RS08750 PF01965 DJ-1/PfpI family JYK04_RS08750 PF12833 Helix-turn-helix domain JYK04_RS08755 PF00857 Isochorismatase family JYK04_RS08770 PF02040 Arsenical pump membrane protein JYK04_RS08775 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JYK04_RS08790 PF13350 Tyrosine phosphatase family JYK04_RS08795 PF00571 CBS domain JYK04_RS08795 PF00478 IMP dehydrogenase / GMP reductase domain JYK04_RS08800 PF01471 Putative peptidoglycan binding domain JYK04_RS08815 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS08815 PF00672 HAMP domain JYK04_RS08820 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS08820 PF00072 Response regulator receiver domain JYK04_RS08840 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS08915 PF00589 Phage integrase family JYK04_RS08935 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS09090 PF00589 Phage integrase family JYK04_RS09095 PF03033 Glycosyltransferase family 28 N-terminal domain JYK04_RS09095 PF04101 Glycosyltransferase family 28 C-terminal domain JYK04_RS09100 PF16363 GDP-mannose 4,6 dehydratase JYK04_RS09110 PF00296 Luciferase-like monooxygenase JYK04_RS09120 PF07859 alpha/beta hydrolase fold JYK04_RS09125 PF07690 Major Facilitator Superfamily JYK04_RS09135 PF01757 Acyltransferase family JYK04_RS09150 PF02350 UDP-N-acetylglucosamine 2-epimerase JYK04_RS09155 PF01565 FAD binding domain JYK04_RS09155 PF08031 Berberine and berberine like JYK04_RS09160 PF07690 Major Facilitator Superfamily JYK04_RS09165 PF00106 short chain dehydrogenase JYK04_RS09170 PF07690 Major Facilitator Superfamily JYK04_RS09180 PF00483 Nucleotidyl transferase JYK04_RS09185 PF08361 MAATS-type transcriptional repressor, C-terminal region JYK04_RS09185 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS09195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYK04_RS09195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYK04_RS09195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYK04_RS09195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYK04_RS09205 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS09210 PF03756 A-factor biosynthesis hotdog domain JYK04_RS09215 PF03831 PhnA domain JYK04_RS09215 PF08274 PhnA Zinc-Ribbon JYK04_RS09220 PF01979 Amidohydrolase family JYK04_RS09230 PF00144 Beta-lactamase JYK04_RS09245 PF08267 Cobalamin-independent synthase, N-terminal domain JYK04_RS09245 PF01717 Cobalamin-independent synthase, Catalytic domain JYK04_RS09255 PF01494 FAD binding domain JYK04_RS09260 PF04486 SchA/CurD like domain JYK04_RS09265 PF00550 Phosphopantetheine attachment site JYK04_RS09270 PF00891 O-methyltransferase domain JYK04_RS09290 PF00400 WD domain, G-beta repeat JYK04_RS09290 PF12894 Anaphase-promoting complex subunit 4 WD40 domain JYK04_RS09295 PF01381 Helix-turn-helix JYK04_RS09295 PF07883 Cupin domain JYK04_RS09305 PF00005 ABC transporter JYK04_RS09310 PF09084 NMT1/THI5 like JYK04_RS09320 PF00296 Luciferase-like monooxygenase JYK04_RS09325 PF00296 Luciferase-like monooxygenase JYK04_RS09330 PF00296 Luciferase-like monooxygenase JYK04_RS09335 PF00296 Luciferase-like monooxygenase JYK04_RS09345 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS09365 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS09385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS09385 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS09385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS09395 PF01327 Polypeptide deformylase JYK04_RS09400 PF08353 Domain of unknown function (DUF1727) JYK04_RS09400 PF08245 Mur ligase middle domain JYK04_RS09405 PF07685 CobB/CobQ-like glutamine amidotransferase domain JYK04_RS09410 PF00365 Phosphofructokinase JYK04_RS09415 PF05425 Copper resistance protein D JYK04_RS09415 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JYK04_RS09430 PF00561 alpha/beta hydrolase fold JYK04_RS09435 PF01774 UreD urease accessory protein JYK04_RS09440 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYK04_RS09450 PF00449 Urease alpha-subunit, N-terminal domain JYK04_RS09450 PF01979 Amidohydrolase family JYK04_RS09455 PF00699 Urease beta subunit JYK04_RS09460 PF00547 Urease, gamma subunit JYK04_RS09485 PF00155 Aminotransferase class I and II JYK04_RS09490 PF06968 Biotin and Thiamin Synthesis associated domain JYK04_RS09490 PF04055 Radical SAM superfamily JYK04_RS09495 PF00202 Aminotransferase class-III JYK04_RS09505 PF00583 Acetyltransferase (GNAT) family JYK04_RS09510 PF00571 CBS domain JYK04_RS09510 PF01595 Cyclin M transmembrane N-terminal domain JYK04_RS09510 PF03471 Transporter associated domain JYK04_RS09515 PF01595 Cyclin M transmembrane N-terminal domain JYK04_RS09515 PF00571 CBS domain JYK04_RS09525 PF00206 Lyase JYK04_RS09525 PF10397 Adenylosuccinate lyase C-terminus JYK04_RS09560 PF00005 ABC transporter JYK04_RS09565 PF07730 Histidine kinase JYK04_RS09570 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS09570 PF00072 Response regulator receiver domain JYK04_RS09575 PF00480 ROK family JYK04_RS09580 PF07702 UTRA domain JYK04_RS09580 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS09585 PF00561 alpha/beta hydrolase fold JYK04_RS09610 PF01037 Lrp/AsnC ligand binding domain JYK04_RS09615 PF13476 AAA domain JYK04_RS09620 PF12320 Type 5 capsule protein repressor C-terminal domain JYK04_RS09620 PF00149 Calcineurin-like phosphoesterase JYK04_RS09625 PF09186 Domain of unknown function (DUF1949) JYK04_RS09625 PF01205 Uncharacterized protein family UPF0029 JYK04_RS09635 PF13380 CoA binding domain JYK04_RS09650 PF00132 Bacterial transferase hexapeptide (six repeats) JYK04_RS09655 PF00132 Bacterial transferase hexapeptide (six repeats) JYK04_RS09660 PF09335 SNARE associated Golgi protein JYK04_RS09665 PF01915 Glycosyl hydrolase family 3 C-terminal domain JYK04_RS09665 PF00933 Glycosyl hydrolase family 3 N terminal domain JYK04_RS09665 PF14310 Fibronectin type III-like domain JYK04_RS09695 PF00009 Elongation factor Tu GTP binding domain JYK04_RS09695 PF03144 Elongation factor Tu domain 2 JYK04_RS09695 PF03143 Elongation factor Tu C-terminal domain JYK04_RS09710 PF02673 Bacitracin resistance protein BacA JYK04_RS09725 PF00795 Carbon-nitrogen hydrolase JYK04_RS09730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK04_RS09735 PF04978 Protein of unknown function (DUF664) JYK04_RS09750 PF03167 Uracil DNA glycosylase superfamily JYK04_RS09755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS09790 PF03466 LysR substrate binding domain JYK04_RS09800 PF00155 Aminotransferase class I and II JYK04_RS09800 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS09810 PF00892 EamA-like transporter family JYK04_RS09825 PF03551 Transcriptional regulator PadR-like family JYK04_RS09835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS09835 PF00672 HAMP domain JYK04_RS09835 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS09840 PF00072 Response regulator receiver domain JYK04_RS09840 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS09845 PF02567 Phenazine biosynthesis-like protein JYK04_RS09875 PF02347 Glycine cleavage system P-protein JYK04_RS09885 PF11799 impB/mucB/samB family C-terminal domain JYK04_RS09885 PF00817 impB/mucB/samB family JYK04_RS09890 PF13411 MerR HTH family regulatory protein JYK04_RS09895 PF02577 Bifunctional nuclease JYK04_RS09900 PF00376 MerR family regulatory protein JYK04_RS09905 PF00498 FHA domain JYK04_RS09910 PF05949 Bacterial protein of unknown function (DUF881) JYK04_RS09915 PF06947 Protein of unknown function (DUF1290) JYK04_RS09920 PF05949 Bacterial protein of unknown function (DUF881) JYK04_RS09925 PF00483 Nucleotidyl transferase JYK04_RS09930 PF01066 CDP-alcohol phosphatidyltransferase JYK04_RS09950 PF00367 phosphotransferase system, EIIB JYK04_RS09950 PF02378 Phosphotransferase system, EIIC JYK04_RS09950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JYK04_RS09955 PF05524 PEP-utilising enzyme, N-terminal JYK04_RS09955 PF00391 PEP-utilising enzyme, mobile domain JYK04_RS09955 PF02896 PEP-utilising enzyme, TIM barrel domain JYK04_RS09965 PF00501 AMP-binding enzyme JYK04_RS09965 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS09970 PF01055 Glycosyl hydrolases family 31 JYK04_RS09970 PF13802 Galactose mutarotase-like JYK04_RS09970 PF16338 Domain of unknown function (DUF4968) JYK04_RS09970 PF17137 Domain of unknown function (DUF5110) JYK04_RS09990 PF00293 NUDIX domain JYK04_RS10005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS10005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS10020 PF03259 Roadblock/LC7 domain JYK04_RS10050 PF03746 LamB/YcsF family JYK04_RS10055 PF02682 Carboxyltransferase domain, subdomain C and D JYK04_RS10060 PF02626 Carboxyltransferase domain, subdomain A and B JYK04_RS10080 PF12796 Ankyrin repeats (3 copies) JYK04_RS10080 PF00023 Ankyrin repeat JYK04_RS10095 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS10095 PF00155 Aminotransferase class I and II JYK04_RS10105 PF11700 Vacuole effluxer Atg22 like JYK04_RS10110 PF13397 RNA polymerase-binding protein JYK04_RS10115 PF04186 FxsA cytoplasmic membrane protein JYK04_RS10120 PF00535 Glycosyl transferase family 2 JYK04_RS10125 PF07969 Amidohydrolase family JYK04_RS10130 PF01037 Lrp/AsnC ligand binding domain JYK04_RS10140 PF01636 Phosphotransferase enzyme family JYK04_RS10155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS10155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS10155 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS10160 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS10180 PF00485 Phosphoribulokinase / Uridine kinase family JYK04_RS10185 PF17866 AAA lid domain JYK04_RS10185 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS10195 PF00571 CBS domain JYK04_RS10195 PF01595 Cyclin M transmembrane N-terminal domain JYK04_RS10200 PF01595 Cyclin M transmembrane N-terminal domain JYK04_RS10200 PF03471 Transporter associated domain JYK04_RS10200 PF00571 CBS domain JYK04_RS10210 PF08029 HisG, C-terminal domain JYK04_RS10210 PF01634 ATP phosphoribosyltransferase JYK04_RS10215 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JYK04_RS10220 PF00885 6,7-dimethyl-8-ribityllumazine synthase JYK04_RS10225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JYK04_RS10225 PF00925 GTP cyclohydrolase II JYK04_RS10230 PF04973 Nicotinamide mononucleotide transporter JYK04_RS10235 PF00677 Lumazine binding domain JYK04_RS10240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYK04_RS10240 PF01872 RibD C-terminal domain JYK04_RS10245 PF06483 Chitinase C JYK04_RS10245 PF00704 Glycosyl hydrolases family 18 JYK04_RS10250 PF08281 Sigma-70, region 4 JYK04_RS10250 PF04542 Sigma-70 region 2 JYK04_RS10250 PF12680 SnoaL-like domain JYK04_RS10260 PF00480 ROK family JYK04_RS10265 PF07690 Major Facilitator Superfamily JYK04_RS10270 PF00860 Permease family JYK04_RS10285 PF01593 Flavin containing amine oxidoreductase JYK04_RS10290 PF00795 Carbon-nitrogen hydrolase JYK04_RS10300 PF13508 Acetyltransferase (GNAT) domain JYK04_RS10300 PF00583 Acetyltransferase (GNAT) family JYK04_RS10310 PF13520 Amino acid permease JYK04_RS10320 PF13472 GDSL-like Lipase/Acylhydrolase family JYK04_RS10330 PF04397 LytTr DNA-binding domain JYK04_RS10330 PF00072 Response regulator receiver domain JYK04_RS10340 PF00474 Sodium:solute symporter family JYK04_RS10345 PF07694 5TMR of 5TMR-LYT JYK04_RS10345 PF06580 Histidine kinase JYK04_RS10350 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS10355 PF04545 Sigma-70, region 4 JYK04_RS10355 PF04542 Sigma-70 region 2 JYK04_RS10360 PF00478 IMP dehydrogenase / GMP reductase domain JYK04_RS10360 PF00571 CBS domain JYK04_RS10375 PF06736 Protein of unknown function (DUF1211) JYK04_RS10385 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS10385 PF00072 Response regulator receiver domain JYK04_RS10385 PF08448 PAS fold JYK04_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS10385 PF13188 PAS domain JYK04_RS10390 PF07690 Major Facilitator Superfamily JYK04_RS10395 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK04_RS10395 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK04_RS10400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK04_RS10400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK04_RS10405 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS10405 PF01799 [2Fe-2S] binding domain JYK04_RS10415 PF00171 Aldehyde dehydrogenase family JYK04_RS10425 PF10609 NUBPL iron-transfer P-loop NTPase JYK04_RS10430 PF00672 HAMP domain JYK04_RS10430 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS10445 PF00128 Alpha amylase, catalytic domain JYK04_RS10445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK04_RS10450 PF01740 STAS domain JYK04_RS10470 PF05199 GMC oxidoreductase JYK04_RS10470 PF00732 GMC oxidoreductase JYK04_RS10490 PF00205 Thiamine pyrophosphate enzyme, central domain JYK04_RS10490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK04_RS10490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK04_RS10505 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS10520 PF01152 Bacterial-like globin JYK04_RS10530 PF00545 ribonuclease JYK04_RS10535 PF13361 UvrD-like helicase C-terminal domain JYK04_RS10535 PF00580 UvrD/REP helicase N-terminal domain JYK04_RS10540 PF04198 Putative sugar-binding domain JYK04_RS10545 PF00834 Ribulose-phosphate 3 epimerase family JYK04_RS10550 PF01029 NusB family JYK04_RS10550 PF01189 16S rRNA methyltransferase RsmB/F JYK04_RS10555 PF00551 Formyl transferase JYK04_RS10555 PF02911 Formyl transferase, C-terminal domain JYK04_RS10565 PF17764 3′ DNA-binding domain (3′BD) JYK04_RS10570 PF00438 S-adenosylmethionine synthetase, N-terminal domain JYK04_RS10570 PF02772 S-adenosylmethionine synthetase, central domain JYK04_RS10570 PF02773 S-adenosylmethionine synthetase, C-terminal domain JYK04_RS10575 PF04127 DNA / pantothenate metabolism flavoprotein JYK04_RS10575 PF02441 Flavoprotein JYK04_RS10580 PF01192 RNA polymerase Rpb6 JYK04_RS10585 PF00625 Guanylate kinase JYK04_RS10595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JYK04_RS10600 PF01180 Dihydroorotate dehydrogenase JYK04_RS10605 PF02142 MGS-like domain JYK04_RS10605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK04_RS10605 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JYK04_RS10610 PF00117 Glutamine amidotransferase class-I JYK04_RS10610 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JYK04_RS10620 PF01979 Amidohydrolase family JYK04_RS10625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYK04_RS10625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYK04_RS10630 PF00156 Phosphoribosyl transferase domain JYK04_RS10640 PF01029 NusB family JYK04_RS10645 PF08207 Elongation factor P (EF-P) KOW-like domain JYK04_RS10645 PF09285 Elongation factor P, C-terminal JYK04_RS10645 PF01132 Elongation factor P (EF-P) OB domain JYK04_RS10650 PF01321 Creatinase/Prolidase N-terminal domain JYK04_RS10650 PF00557 Metallopeptidase family M24 JYK04_RS10660 PF01220 Dehydroquinase class II JYK04_RS10665 PF01761 3-dehydroquinate synthase JYK04_RS10670 PF01202 Shikimate kinase JYK04_RS10675 PF01264 Chorismate synthase JYK04_RS10685 PF01488 Shikimate / quinate 5-dehydrogenase JYK04_RS10685 PF08501 Shikimate dehydrogenase substrate binding domain JYK04_RS10685 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYK04_RS10695 PF03652 Holliday junction resolvase JYK04_RS10700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYK04_RS10700 PF02272 DHHA1 domain JYK04_RS10700 PF01411 tRNA synthetases class II (A) JYK04_RS10715 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS10720 PF01479 S4 domain JYK04_RS10720 PF00163 Ribosomal protein S4/S9 N-terminal domain JYK04_RS10730 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS10730 PF16193 AAA C-terminal domain JYK04_RS10730 PF12002 MgsA AAA+ ATPase C terminal JYK04_RS10740 PF03129 Anticodon binding domain JYK04_RS10740 PF13393 Histidyl-tRNA synthetase JYK04_RS10745 PF00753 Metallo-beta-lactamase superfamily JYK04_RS10750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYK04_RS10755 PF03993 Domain of Unknown Function (DUF349) JYK04_RS10760 PF13291 ACT domain JYK04_RS10760 PF04607 Region found in RelA / SpoT proteins JYK04_RS10760 PF02824 TGS domain JYK04_RS10765 PF00156 Phosphoribosyl transferase domain JYK04_RS10770 PF02355 Protein export membrane protein JYK04_RS10770 PF07549 SecD/SecF GG Motif JYK04_RS10775 PF02355 Protein export membrane protein JYK04_RS10775 PF07549 SecD/SecF GG Motif JYK04_RS10780 PF02699 Preprotein translocase subunit JYK04_RS10785 PF05496 Holliday junction DNA helicase RuvB P-loop domain JYK04_RS10785 PF17864 RuvB AAA lid domain JYK04_RS10785 PF05491 RuvB C-terminal winged helix domain JYK04_RS10790 PF01330 RuvA N terminal domain JYK04_RS10790 PF07499 RuvA, C-terminal domain JYK04_RS10795 PF02075 Crossover junction endodeoxyribonuclease RuvC JYK04_RS10800 PF01709 Transcriptional regulator JYK04_RS10805 PF01174 SNO glutamine amidotransferase family JYK04_RS10810 PF01680 SOR/SNZ family JYK04_RS10825 PF13439 Glycosyltransferase Family 4 JYK04_RS10830 PF03279 Bacterial lipid A biosynthesis acyltransferase JYK04_RS10835 PF01066 CDP-alcohol phosphatidyltransferase JYK04_RS10840 PF00679 Elongation factor G C-terminus JYK04_RS10840 PF03144 Elongation factor Tu domain 2 JYK04_RS10840 PF14492 Elongation Factor G, domain II JYK04_RS10840 PF03764 Elongation factor G, domain IV JYK04_RS10840 PF00009 Elongation factor Tu GTP binding domain JYK04_RS10855 PF01230 HIT domain JYK04_RS10860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYK04_RS10860 PF03129 Anticodon binding domain JYK04_RS10860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK04_RS10865 PF00583 Acetyltransferase (GNAT) family JYK04_RS10885 PF00929 Exonuclease JYK04_RS10910 PF04686 Streptomyces sporulation and cell division protein, SsgA JYK04_RS10935 PF01063 Amino-transferase class IV JYK04_RS10940 PF04715 Anthranilate synthase component I, N terminal region JYK04_RS10940 PF00425 chorismate binding enzyme JYK04_RS10975 PF00400 WD domain, G-beta repeat JYK04_RS10975 PF00069 Protein kinase domain JYK04_RS10980 PF00588 SpoU rRNA Methylase family JYK04_RS10985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK04_RS10985 PF10414 Sirohaem synthase dimerisation region JYK04_RS10985 PF14824 Sirohaem biosynthesis protein central JYK04_RS10990 PF02277 Phosphoribosyltransferase JYK04_RS10995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK04_RS11005 PF03180 NLPA lipoprotein JYK04_RS11010 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS11015 PF09383 NIL domain JYK04_RS11015 PF00005 ABC transporter JYK04_RS11045 PF00501 AMP-binding enzyme JYK04_RS11045 PF01553 Acyltransferase JYK04_RS11055 PF07690 Major Facilitator Superfamily JYK04_RS11070 PF00206 Lyase JYK04_RS11070 PF14698 Argininosuccinate lyase C-terminal JYK04_RS11075 PF00764 Arginosuccinate synthase JYK04_RS11095 PF01316 Arginine repressor, DNA binding domain JYK04_RS11095 PF02863 Arginine repressor, C-terminal domain JYK04_RS11100 PF00202 Aminotransferase class-III JYK04_RS11105 PF00696 Amino acid kinase family JYK04_RS11110 PF01960 ArgJ family JYK04_RS11115 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYK04_RS11115 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYK04_RS11130 PF00892 EamA-like transporter family JYK04_RS11140 PF02638 Glycosyl hydrolase-like 10 JYK04_RS11145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK04_RS11145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK04_RS11150 PF00293 NUDIX domain JYK04_RS11165 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JYK04_RS11165 PF01588 Putative tRNA binding domain JYK04_RS11165 PF03147 Ferredoxin-fold anticodon binding domain JYK04_RS11165 PF03483 B3/4 domain JYK04_RS11165 PF03484 tRNA synthetase B5 domain JYK04_RS11170 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JYK04_RS11170 PF01409 tRNA synthetases class II core domain (F) JYK04_RS11175 PF00989 PAS fold JYK04_RS11175 PF18698 Histidine kinase sensor domain JYK04_RS11175 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS11175 PF00672 HAMP domain JYK04_RS11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS11180 PF00588 SpoU rRNA Methylase family JYK04_RS11180 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYK04_RS11185 PF00453 Ribosomal protein L20 JYK04_RS11190 PF01632 Ribosomal protein L35 JYK04_RS11195 PF05198 Translation initiation factor IF-3, N-terminal domain JYK04_RS11195 PF00707 Translation initiation factor IF-3, C-terminal domain JYK04_RS11210 PF00082 Subtilase family JYK04_RS11235 PF00171 Aldehyde dehydrogenase family JYK04_RS11240 PF00120 Glutamine synthetase, catalytic domain JYK04_RS11240 PF03951 Glutamine synthetase, beta-Grasp domain JYK04_RS11245 PF07729 FCD domain JYK04_RS11245 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS11250 PF00324 Amino acid permease JYK04_RS11255 PF07722 Peptidase C26 JYK04_RS11270 PF03466 LysR substrate binding domain JYK04_RS11270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS11285 PF01381 Helix-turn-helix JYK04_RS11290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JYK04_RS11290 PF01367 5'-3' exonuclease, C-terminal SAM fold JYK04_RS11295 PF08021 Siderophore-interacting FAD-binding domain JYK04_RS11295 PF04954 Siderophore-interacting protein JYK04_RS11305 PF00849 RNA pseudouridylate synthase JYK04_RS11310 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS11315 PF08148 DSHCT (NUC185) domain JYK04_RS11315 PF00270 DEAD/DEAH box helicase JYK04_RS11315 PF00271 Helicase conserved C-terminal domain JYK04_RS11320 PF00781 Diacylglycerol kinase catalytic domain JYK04_RS11325 PF00902 Sec-independent protein translocase protein (TatC) JYK04_RS11330 PF02416 mttA/Hcf106 family JYK04_RS11350 PF13280 WYL domain JYK04_RS11355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYK04_RS11360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYK04_RS11365 PF03136 Pup-ligase protein JYK04_RS11375 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS11380 PF00227 Proteasome subunit JYK04_RS11385 PF00227 Proteasome subunit JYK04_RS11395 PF05639 Pup-like protein JYK04_RS11400 PF03136 Pup-ligase protein JYK04_RS11405 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS11405 PF17758 Proteasomal ATPase OB N-terminal domain JYK04_RS11405 PF16450 Proteasomal ATPase OB C-terminal domain JYK04_RS11420 PF08704 tRNA methyltransferase complex GCD14 subunit JYK04_RS11425 PF00571 CBS domain JYK04_RS11425 PF02163 Peptidase family M50 JYK04_RS11435 PF00072 Response regulator receiver domain JYK04_RS11435 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS11440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS11445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS11455 PF02310 B12 binding domain JYK04_RS11455 PF02607 B12 binding domain JYK04_RS11455 PF02965 Vitamin B12 dependent methionine synthase, activation domain JYK04_RS11455 PF00809 Pterin binding enzyme JYK04_RS11455 PF02574 Homocysteine S-methyltransferase JYK04_RS11460 PF09339 IclR helix-turn-helix domain JYK04_RS11460 PF01614 Bacterial transcriptional regulator JYK04_RS11465 PF00230 Major intrinsic protein JYK04_RS11470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYK04_RS11470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYK04_RS11475 PF01266 FAD dependent oxidoreductase JYK04_RS11475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JYK04_RS11490 PF01406 tRNA synthetases class I (C) catalytic domain JYK04_RS11510 PF01544 CorA-like Mg2+ transporter protein JYK04_RS11520 PF00296 Luciferase-like monooxygenase JYK04_RS11525 PF00248 Aldo/keto reductase family JYK04_RS11545 PF03777 ChpA-C JYK04_RS11550 PF03777 ChpA-C JYK04_RS11555 PF07687 Peptidase dimerisation domain JYK04_RS11555 PF01546 Peptidase family M20/M25/M40 JYK04_RS11565 PF12680 SnoaL-like domain JYK04_RS11565 PF08281 Sigma-70, region 4 JYK04_RS11565 PF04542 Sigma-70 region 2 JYK04_RS11575 PF08448 PAS fold JYK04_RS11575 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS11575 PF13466 STAS domain JYK04_RS11575 PF13581 Histidine kinase-like ATPase domain JYK04_RS11580 PF00324 Amino acid permease JYK04_RS11600 PF00890 FAD binding domain JYK04_RS11605 PF00293 NUDIX domain JYK04_RS11610 PF02656 Domain of unknown function (DUF202) JYK04_RS11630 PF01636 Phosphotransferase enzyme family JYK04_RS11635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS11635 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS11635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS11640 PF05922 Peptidase inhibitor I9 JYK04_RS11640 PF00082 Subtilase family JYK04_RS11645 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS11645 PF08361 MAATS-type transcriptional repressor, C-terminal region JYK04_RS11650 PF00501 AMP-binding enzyme JYK04_RS11650 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS11655 PF00106 short chain dehydrogenase JYK04_RS11660 PF07075 Protein of unknown function (DUF1343) JYK04_RS11680 PF00376 MerR family regulatory protein JYK04_RS11680 PF09278 MerR, DNA binding JYK04_RS11685 PF01575 MaoC like domain JYK04_RS11700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS11700 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS11700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS11705 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS11705 PF02909 Tetracyclin repressor-like, C-terminal domain JYK04_RS11715 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS11720 PF01494 FAD binding domain JYK04_RS11725 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS11725 PF00107 Zinc-binding dehydrogenase JYK04_RS11730 PF00171 Aldehyde dehydrogenase family JYK04_RS11735 PF03600 Citrate transporter JYK04_RS11740 PF00384 Molybdopterin oxidoreductase JYK04_RS11740 PF01568 Molydopterin dinucleotide binding domain JYK04_RS11740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYK04_RS11745 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS11745 PF17925 Tetracyclin repressor-like, C-terminal domain JYK04_RS11765 PF04209 homogentisate 1,2-dioxygenase JYK04_RS11770 PF07702 UTRA domain JYK04_RS11770 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS11785 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS11790 PF13732 Domain of unknown function (DUF4162) JYK04_RS11790 PF00005 ABC transporter JYK04_RS11795 PF01061 ABC-2 type transporter JYK04_RS11800 PF02515 CoA-transferase family III JYK04_RS11810 PF00069 Protein kinase domain JYK04_RS11815 PF13472 GDSL-like Lipase/Acylhydrolase family JYK04_RS11855 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JYK04_RS11855 PF18416 N-acetylglucosamine binding protein domain 2 JYK04_RS11865 PF00817 impB/mucB/samB family JYK04_RS11865 PF11799 impB/mucB/samB family C-terminal domain JYK04_RS11870 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYK04_RS11870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYK04_RS11870 PF14579 Helix-hairpin-helix motif JYK04_RS11870 PF02811 PHP domain JYK04_RS11875 PF07969 Amidohydrolase family JYK04_RS11900 PF04055 Radical SAM superfamily JYK04_RS11930 PF02983 Alpha-lytic protease prodomain JYK04_RS11930 PF00089 Trypsin JYK04_RS11940 PF04472 Cell division protein SepF JYK04_RS11945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS11945 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS11945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS11950 PF07690 Major Facilitator Superfamily JYK04_RS11960 PF01569 PAP2 superfamily JYK04_RS11975 PF06737 Transglycosylase-like domain JYK04_RS11975 PF03990 G5-linked-Ubiquitin-like domain JYK04_RS11975 PF07501 G5 domain JYK04_RS11995 PF01926 50S ribosome-binding GTPase JYK04_RS11995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JYK04_RS12005 PF02224 Cytidylate kinase JYK04_RS12010 PF02153 Prephenate dehydrogenase JYK04_RS12030 PF10127 RNA repair pathway DNA polymerase beta family JYK04_RS12035 PF03747 ADP-ribosylglycohydrolase JYK04_RS12055 PF00849 RNA pseudouridylate synthase JYK04_RS12055 PF01479 S4 domain JYK04_RS12060 PF04079 Segregation and condensation complex subunit ScpB JYK04_RS12065 PF02616 Segregation and condensation protein ScpA JYK04_RS12075 PF13614 AAA domain JYK04_RS12080 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JYK04_RS12080 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JYK04_RS12085 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS12085 PF03704 Bacterial transcriptional activator domain JYK04_RS12085 PF00931 NB-ARC domain JYK04_RS12090 PF00293 NUDIX domain JYK04_RS12095 PF00117 Glutamine amidotransferase class-I JYK04_RS12095 PF06418 CTP synthase N-terminus JYK04_RS12100 PF00723 Glycosyl hydrolases family 15 JYK04_RS12110 PF01734 Patatin-like phospholipase JYK04_RS12110 PF11856 Protein of unknown function (DUF3376) JYK04_RS12110 PF01734 Patatin-like phospholipase JYK04_RS12110 PF11856 Protein of unknown function (DUF3376) JYK04_RS12115 PF01565 FAD binding domain JYK04_RS12115 PF08031 Berberine and berberine like JYK04_RS12125 PF00534 Glycosyl transferases group 1 JYK04_RS12125 PF13439 Glycosyltransferase Family 4 JYK04_RS12130 PF02463 RecF/RecN/SMC N terminal domain JYK04_RS12135 PF01513 ATP-NAD kinase JYK04_RS12140 PF01728 FtsJ-like methyltransferase JYK04_RS12140 PF01479 S4 domain JYK04_RS12155 PF00005 ABC transporter JYK04_RS12160 PF01032 FecCD transport family JYK04_RS12165 PF01032 FecCD transport family JYK04_RS12170 PF13344 Haloacid dehalogenase-like hydrolase JYK04_RS12170 PF18407 GCN5-related N-acetyltransferase like domain JYK04_RS12205 PF02245 Methylpurine-DNA glycosylase (MPG) JYK04_RS12215 PF01161 Phosphatidylethanolamine-binding protein JYK04_RS12230 PF01145 SPFH domain / Band 7 family JYK04_RS12240 PF00005 ABC transporter JYK04_RS12250 PF03777 ChpA-C JYK04_RS12255 PF00072 Response regulator receiver domain JYK04_RS12255 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS12260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS12260 PF07730 Histidine kinase JYK04_RS12260 PF13492 GAF domain JYK04_RS12270 PF02547 Queuosine biosynthesis protein JYK04_RS12280 PF01061 ABC-2 type transporter JYK04_RS12280 PF00005 ABC transporter JYK04_RS12280 PF00498 FHA domain JYK04_RS12295 PF00300 Histidine phosphatase superfamily (branch 1) JYK04_RS12310 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS12310 PF07729 FCD domain JYK04_RS12340 PF00579 tRNA synthetases class I (W and Y) JYK04_RS12360 PF06463 Molybdenum Cofactor Synthesis C JYK04_RS12360 PF04055 Radical SAM superfamily JYK04_RS12365 PF00474 Sodium:solute symporter family JYK04_RS12375 PF05922 Peptidase inhibitor I9 JYK04_RS12375 PF00082 Subtilase family JYK04_RS12380 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS12380 PF00107 Zinc-binding dehydrogenase JYK04_RS12390 PF04116 Fatty acid hydroxylase superfamily JYK04_RS12410 PF00106 short chain dehydrogenase JYK04_RS12420 PF02909 Tetracyclin repressor-like, C-terminal domain JYK04_RS12420 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS12430 PF00929 Exonuclease JYK04_RS12470 PF03780 Asp23 family, cell envelope-related function JYK04_RS12475 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS12485 PF12848 ABC transporter JYK04_RS12485 PF00005 ABC transporter JYK04_RS12485 PF16326 ABC transporter C-terminal domain JYK04_RS12490 PF04228 Putative neutral zinc metallopeptidase JYK04_RS12510 PF01384 Phosphate transporter family JYK04_RS12520 PF03186 CobD/Cbib protein JYK04_RS12525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYK04_RS12525 PF07685 CobB/CobQ-like glutamine amidotransferase domain JYK04_RS12530 PF13519 von Willebrand factor type A domain JYK04_RS12530 PF07728 AAA domain (dynein-related subfamily) JYK04_RS12530 PF17863 AAA lid domain JYK04_RS12535 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JYK04_RS12540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYK04_RS12540 PF07685 CobB/CobQ-like glutamine amidotransferase domain JYK04_RS12550 PF00155 Aminotransferase class I and II JYK04_RS12565 PF01979 Amidohydrolase family JYK04_RS12570 PF00266 Aminotransferase class-V JYK04_RS12585 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS12590 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS12590 PF00072 Response regulator receiver domain JYK04_RS12595 PF07730 Histidine kinase JYK04_RS12605 PF09339 IclR helix-turn-helix domain JYK04_RS12605 PF01614 Bacterial transcriptional regulator JYK04_RS12610 PF00171 Aldehyde dehydrogenase family JYK04_RS12620 PF02342 TerD domain JYK04_RS12665 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JYK04_RS12665 PF14602 Hexapeptide repeat of succinyl-transferase JYK04_RS12675 PF01638 HxlR-like helix-turn-helix JYK04_RS12680 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS12685 PF00893 Small Multidrug Resistance protein JYK04_RS12695 PF01883 Iron-sulfur cluster assembly protein JYK04_RS12700 PF01592 NifU-like N terminal domain JYK04_RS12705 PF00266 Aminotransferase class-V JYK04_RS12710 PF00005 ABC transporter JYK04_RS12715 PF00355 Rieske [2Fe-2S] domain JYK04_RS12720 PF01458 Uncharacterized protein family (UPF0051) JYK04_RS12725 PF01458 Uncharacterized protein family (UPF0051) JYK04_RS12735 PF13732 Domain of unknown function (DUF4162) JYK04_RS12735 PF00005 ABC transporter JYK04_RS12750 PF02628 Cytochrome oxidase assembly protein JYK04_RS12765 PF01040 UbiA prenyltransferase family JYK04_RS12770 PF02779 Transketolase, pyrimidine binding domain JYK04_RS12770 PF02780 Transketolase, C-terminal domain JYK04_RS12770 PF00456 Transketolase, thiamine diphosphate binding domain JYK04_RS12775 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYK04_RS12780 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JYK04_RS12780 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JYK04_RS12790 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JYK04_RS12795 PF00342 Phosphoglucose isomerase JYK04_RS12805 PF03840 Preprotein translocase SecG subunit JYK04_RS12810 PF00121 Triosephosphate isomerase JYK04_RS12815 PF00162 Phosphoglycerate kinase JYK04_RS12820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYK04_RS12820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYK04_RS12825 PF00801 PKD domain JYK04_RS12825 PF05547 Immune inhibitor A peptidase M6 JYK04_RS12830 PF14527 WhiA LAGLIDADG-like domain JYK04_RS12830 PF02650 WhiA C-terminal HTH domain JYK04_RS12830 PF10298 WhiA N-terminal LAGLIDADG-like domain JYK04_RS12835 PF01933 Uncharacterised protein family UPF0052 JYK04_RS12840 PF03668 P-loop ATPase protein family JYK04_RS12845 PF01541 GIY-YIG catalytic domain JYK04_RS12845 PF02151 UvrB/uvrC motif JYK04_RS12845 PF08459 UvrC Helix-hairpin-helix N-terminal JYK04_RS12870 PF00294 pfkB family carbohydrate kinase JYK04_RS12885 PF00005 ABC transporter JYK04_RS12885 PF17755 UvrA DNA-binding domain JYK04_RS12885 PF17760 UvrA interaction domain JYK04_RS12895 PF00753 Metallo-beta-lactamase superfamily JYK04_RS12900 PF07690 Major Facilitator Superfamily JYK04_RS12900 PF00083 Sugar (and other) transporter JYK04_RS12905 PF03741 Integral membrane protein TerC family JYK04_RS12910 PF02342 TerD domain JYK04_RS12915 PF02342 TerD domain JYK04_RS12920 PF00271 Helicase conserved C-terminal domain JYK04_RS12920 PF17757 UvrB interaction domain JYK04_RS12920 PF04851 Type III restriction enzyme, res subunit JYK04_RS12920 PF02151 UvrB/uvrC motif JYK04_RS12920 PF12344 Ultra-violet resistance protein B JYK04_RS12925 PF03009 Glycerophosphoryl diester phosphodiesterase family JYK04_RS12930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYK04_RS12930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYK04_RS12945 PF08241 Methyltransferase domain JYK04_RS12950 PF04227 Indigoidine synthase A like protein JYK04_RS12980 PF03777 ChpA-C JYK04_RS12990 PF04434 SWIM zinc finger JYK04_RS12995 PF00271 Helicase conserved C-terminal domain JYK04_RS12995 PF00176 SNF2 family N-terminal domain JYK04_RS12995 PF12419 SNF2 Helicase protein JYK04_RS13020 PF01121 Dephospho-CoA kinase JYK04_RS13030 PF00575 S1 RNA binding domain JYK04_RS13035 PF12697 Alpha/beta hydrolase family JYK04_RS13035 PF08241 Methyltransferase domain JYK04_RS13040 PF08482 ATP-dependent helicase C-terminal JYK04_RS13040 PF00271 Helicase conserved C-terminal domain JYK04_RS13040 PF00270 DEAD/DEAH box helicase JYK04_RS13040 PF04408 Helicase associated domain (HA2) JYK04_RS13070 PF01367 5'-3' exonuclease, C-terminal SAM fold JYK04_RS13070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JYK04_RS13070 PF00476 DNA polymerase family A JYK04_RS13075 PF00384 Molybdopterin oxidoreductase JYK04_RS13075 PF01568 Molydopterin dinucleotide binding domain JYK04_RS13080 PF03061 Thioesterase superfamily JYK04_RS13090 PF13458 Periplasmic binding protein JYK04_RS13095 PF02653 Branched-chain amino acid transport system / permease component JYK04_RS13100 PF02653 Branched-chain amino acid transport system / permease component JYK04_RS13100 PF11862 Domain of unknown function (DUF3382) JYK04_RS13105 PF00005 ABC transporter JYK04_RS13105 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK04_RS13110 PF00005 ABC transporter JYK04_RS13115 PF03861 ANTAR domain JYK04_RS13115 PF00072 Response regulator receiver domain JYK04_RS13140 PF02887 Pyruvate kinase, alpha/beta domain JYK04_RS13140 PF00224 Pyruvate kinase, barrel domain JYK04_RS13150 PF02872 5'-nucleotidase, C-terminal domain JYK04_RS13150 PF00149 Calcineurin-like phosphoesterase JYK04_RS13160 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JYK04_RS13165 PF00282 Pyridoxal-dependent decarboxylase conserved domain JYK04_RS13170 PF11838 ERAP1-like C-terminal domain JYK04_RS13170 PF01433 Peptidase family M1 domain JYK04_RS13175 PF02153 Prephenate dehydrogenase JYK04_RS13175 PF01817 Chorismate mutase type II JYK04_RS13190 PF00089 Trypsin JYK04_RS13205 PF12697 Alpha/beta hydrolase family JYK04_RS13210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK04_RS13210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK04_RS13230 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS13235 PF01144 Coenzyme A transferase JYK04_RS13245 PF03060 Nitronate monooxygenase JYK04_RS13250 PF13350 Tyrosine phosphatase family JYK04_RS13255 PF00270 DEAD/DEAH box helicase JYK04_RS13255 PF00271 Helicase conserved C-terminal domain JYK04_RS13260 PF00313 'Cold-shock' DNA-binding domain JYK04_RS13270 PF02803 Thiolase, C-terminal domain JYK04_RS13270 PF00108 Thiolase, N-terminal domain JYK04_RS13275 PF17932 Tetracyclin repressor-like, C-terminal domain JYK04_RS13275 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS13295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS13295 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS13295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS13300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS13300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS13300 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS13305 PF08241 Methyltransferase domain JYK04_RS13335 PF00296 Luciferase-like monooxygenase JYK04_RS13365 PF00005 ABC transporter JYK04_RS13370 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS13420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JYK04_RS13425 PF01493 GXGXG motif JYK04_RS13425 PF01645 Conserved region in glutamate synthase JYK04_RS13425 PF04898 Glutamate synthase central domain JYK04_RS13425 PF00310 Glutamine amidotransferases class-II JYK04_RS13435 PF03747 ADP-ribosylglycohydrolase JYK04_RS13445 PF03747 ADP-ribosylglycohydrolase JYK04_RS13460 PF00294 pfkB family carbohydrate kinase JYK04_RS13465 PF02515 CoA-transferase family III JYK04_RS13470 PF03328 HpcH/HpaI aldolase/citrate lyase family JYK04_RS13475 PF01790 Prolipoprotein diacylglyceryl transferase JYK04_RS13485 PF00290 Tryptophan synthase alpha chain JYK04_RS13490 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS13500 PF00218 Indole-3-glycerol phosphate synthase JYK04_RS13520 PF04715 Anthranilate synthase component I, N terminal region JYK04_RS13520 PF00425 chorismate binding enzyme JYK04_RS13525 PF01502 Phosphoribosyl-AMP cyclohydrolase JYK04_RS13535 PF00977 Histidine biosynthesis protein JYK04_RS13540 PF01042 Endoribonuclease L-PSP JYK04_RS13545 PF00977 Histidine biosynthesis protein JYK04_RS13550 PF00117 Glutamine amidotransferase class-I JYK04_RS13560 PF00475 Imidazoleglycerol-phosphate dehydratase JYK04_RS13565 PF00155 Aminotransferase class I and II JYK04_RS13570 PF00815 Histidinol dehydrogenase JYK04_RS13580 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS13580 PF05362 Lon protease (S16) C-terminal proteolytic domain JYK04_RS13580 PF02190 ATP-dependent protease La (LON) substrate-binding domain JYK04_RS13585 PF04073 Aminoacyl-tRNA editing domain JYK04_RS13600 PF00005 ABC transporter JYK04_RS13600 PF13732 Domain of unknown function (DUF4162) JYK04_RS13615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYK04_RS13615 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYK04_RS13615 PF14579 Helix-hairpin-helix motif JYK04_RS13615 PF02811 PHP domain JYK04_RS13635 PF16655 PhoD-like phosphatase, N-terminal domain JYK04_RS13635 PF09423 PhoD-like phosphatase JYK04_RS13665 PF00999 Sodium/hydrogen exchanger family JYK04_RS13675 PF00849 RNA pseudouridylate synthase JYK04_RS13680 PF01252 Signal peptidase (SPase) II JYK04_RS13685 PF01258 Prokaryotic dksA/traR C4-type zinc finger JYK04_RS13690 PF08264 Anticodon-binding domain of tRNA JYK04_RS13690 PF00133 tRNA synthetases class I (I, L, M and V) JYK04_RS13695 PF05103 DivIVA protein JYK04_RS13705 PF04472 Cell division protein SepF JYK04_RS13710 PF01168 Alanine racemase, N-terminal domain JYK04_RS13715 PF02578 Multi-copper polyphenol oxidoreductase laccase JYK04_RS13720 PF12327 FtsZ family, C-terminal domain JYK04_RS13720 PF00091 Tubulin/FtsZ family, GTPase domain JYK04_RS13725 PF08478 POTRA domain, FtsQ-type JYK04_RS13730 PF04101 Glycosyltransferase family 28 C-terminal domain JYK04_RS13730 PF03033 Glycosyltransferase family 28 N-terminal domain JYK04_RS13735 PF01098 Cell cycle protein JYK04_RS13740 PF02875 Mur ligase family, glutamate ligase domain JYK04_RS13740 PF08245 Mur ligase middle domain JYK04_RS13745 PF00953 Glycosyl transferase family 4 JYK04_RS13745 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JYK04_RS13750 PF02875 Mur ligase family, glutamate ligase domain JYK04_RS13750 PF01225 Mur ligase family, catalytic domain JYK04_RS13750 PF08245 Mur ligase middle domain JYK04_RS13755 PF01225 Mur ligase family, catalytic domain JYK04_RS13755 PF02875 Mur ligase family, glutamate ligase domain JYK04_RS13755 PF08245 Mur ligase middle domain JYK04_RS13760 PF03717 Penicillin-binding Protein dimerisation domain JYK04_RS13760 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS13770 PF01795 MraW methylase family JYK04_RS13775 PF00484 Carbonic anhydrase JYK04_RS13780 PF17863 AAA lid domain JYK04_RS13780 PF07726 ATPase family associated with various cellular activities (AAA) JYK04_RS13795 PF08359 YsiA-like protein, C-terminal region JYK04_RS13795 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS13805 PF00005 ABC transporter JYK04_RS13830 PF01593 Flavin containing amine oxidoreductase JYK04_RS13840 PF02219 Methylenetetrahydrofolate reductase JYK04_RS13845 PF02581 Thiamine monophosphate synthase JYK04_RS13855 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS13855 PF14759 Reductase C-terminal JYK04_RS13860 PF01266 FAD dependent oxidoreductase JYK04_RS13860 PF05690 Thiazole biosynthesis protein ThiG JYK04_RS13870 PF05690 Thiazole biosynthesis protein ThiG JYK04_RS13875 PF00069 Protein kinase domain JYK04_RS13875 PF03793 PASTA domain JYK04_RS13880 PF01261 Xylose isomerase-like TIM barrel JYK04_RS13890 PF00174 Oxidoreductase molybdopterin binding domain JYK04_RS13895 PF00210 Ferritin-like domain JYK04_RS13905 PF01474 Class-II DAHP synthetase family JYK04_RS13910 PF00425 chorismate binding enzyme JYK04_RS13910 PF00117 Glutamine amidotransferase class-I JYK04_RS13920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK04_RS13920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK04_RS13925 PF00365 Phosphofructokinase JYK04_RS13930 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS13930 PF00072 Response regulator receiver domain JYK04_RS13935 PF07730 Histidine kinase JYK04_RS13935 PF00672 HAMP domain JYK04_RS13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS13945 PF12146 Serine aminopeptidase, S33 JYK04_RS13960 PF00480 ROK family JYK04_RS13965 PF17230 Family of unknown function (DUF5304) JYK04_RS13970 PF02374 Anion-transporting ATPase JYK04_RS13970 PF17886 HSP20-like domain found in ArsA JYK04_RS13985 PF00501 AMP-binding enzyme JYK04_RS13990 PF05199 GMC oxidoreductase JYK04_RS13990 PF00732 GMC oxidoreductase JYK04_RS13995 PF00534 Glycosyl transferases group 1 JYK04_RS13995 PF13439 Glycosyltransferase Family 4 JYK04_RS14005 PF00877 NlpC/P60 family JYK04_RS14010 PF00877 NlpC/P60 family JYK04_RS14035 PF00266 Aminotransferase class-V JYK04_RS14040 PF00591 Glycosyl transferase family, a/b domain JYK04_RS14040 PF02885 Glycosyl transferase family, helical bundle domain JYK04_RS14045 PF13631 Cytochrome b(N-terminal)/b6/petB JYK04_RS14050 PF00355 Rieske [2Fe-2S] domain JYK04_RS14055 PF00034 Cytochrome c JYK04_RS14055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK04_RS14060 PF00510 Cytochrome c oxidase subunit III JYK04_RS14070 PF17964 Bacterial Ig domain JYK04_RS14070 PF03734 L,D-transpeptidase catalytic domain JYK04_RS14075 PF12270 Cytochrome c oxidase subunit IV JYK04_RS14080 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYK04_RS14085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JYK04_RS14090 PF00266 Aminotransferase class-V JYK04_RS14095 PF00294 pfkB family carbohydrate kinase JYK04_RS14110 PF01521 Iron-sulphur cluster biosynthesis JYK04_RS14115 PF02445 Quinolinate synthetase A protein JYK04_RS14120 PF00873 AcrB/AcrD/AcrF family JYK04_RS14125 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS14125 PF00072 Response regulator receiver domain JYK04_RS14130 PF02654 Cobalamin-5-phosphate synthase JYK04_RS14150 PF11241 Protein of unknown function (DUF3043) JYK04_RS14155 PF13649 Methyltransferase domain JYK04_RS14165 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JYK04_RS14170 PF02277 Phosphoribosyltransferase JYK04_RS14175 PF16995 Transmembrane region of lysyl-tRNA synthetase JYK04_RS14175 PF01336 OB-fold nucleic acid binding domain JYK04_RS14175 PF09924 Uncharacterised conserved protein (DUF2156) JYK04_RS14175 PF00152 tRNA synthetases class II (D, K and N) JYK04_RS14185 PF07730 Histidine kinase JYK04_RS14185 PF05384 Sensor protein DegS JYK04_RS14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS14205 PF00534 Glycosyl transferases group 1 JYK04_RS14205 PF13439 Glycosyltransferase Family 4 JYK04_RS14215 PF02789 Cytosol aminopeptidase family, N-terminal domain JYK04_RS14215 PF00883 Cytosol aminopeptidase family, catalytic domain JYK04_RS14220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK04_RS14220 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS14225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYK04_RS14225 PF02817 e3 binding domain JYK04_RS14225 PF00364 Biotin-requiring enzyme JYK04_RS14230 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS14230 PF07729 FCD domain JYK04_RS14235 PF17831 Pyruvate dehydrogenase E1 component middle domain JYK04_RS14235 PF00456 Transketolase, thiamine diphosphate binding domain JYK04_RS14260 PF00120 Glutamine synthetase, catalytic domain JYK04_RS14260 PF03951 Glutamine synthetase, beta-Grasp domain JYK04_RS14270 PF13829 Domain of unknown function (DUF4191) JYK04_RS14280 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JYK04_RS14280 PF04055 Radical SAM superfamily JYK04_RS14300 PF01593 Flavin containing amine oxidoreductase JYK04_RS14305 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS14305 PF08338 Domain of unknown function (DUF1731) JYK04_RS14325 PF03960 ArsC family JYK04_RS14330 PF12697 Alpha/beta hydrolase family JYK04_RS14335 PF01047 MarR family JYK04_RS14340 PF00155 Aminotransferase class I and II JYK04_RS14340 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS14350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK04_RS14350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK04_RS14355 PF00120 Glutamine synthetase, catalytic domain JYK04_RS14355 PF03951 Glutamine synthetase, beta-Grasp domain JYK04_RS14360 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS14380 PF13350 Tyrosine phosphatase family JYK04_RS14400 PF00970 Oxidoreductase FAD-binding domain JYK04_RS14400 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS14405 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS14415 PF00128 Alpha amylase, catalytic domain JYK04_RS14415 PF02806 Alpha amylase, C-terminal all-beta domain JYK04_RS14415 PF03714 Bacterial pullanase-associated domain JYK04_RS14420 PF00128 Alpha amylase, catalytic domain JYK04_RS14420 PF02806 Alpha amylase, C-terminal all-beta domain JYK04_RS14420 PF00686 Starch binding domain JYK04_RS14440 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS14445 PF00128 Alpha amylase, catalytic domain JYK04_RS14450 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS14455 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS14465 PF00128 Alpha amylase, catalytic domain JYK04_RS14470 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS14495 PF05506 Domain of unknown function (DUF756) JYK04_RS14495 PF04185 Phosphoesterase family JYK04_RS14550 PF00188 Cysteine-rich secretory protein family JYK04_RS14575 PF08335 GlnD PII-uridylyltransferase JYK04_RS14575 PF03710 Glutamate-ammonia ligase adenylyltransferase JYK04_RS14615 PF00120 Glutamine synthetase, catalytic domain JYK04_RS14615 PF03951 Glutamine synthetase, beta-Grasp domain JYK04_RS14635 PF00571 CBS domain JYK04_RS14640 PF12697 Alpha/beta hydrolase family JYK04_RS14650 PF07732 Multicopper oxidase JYK04_RS14650 PF07731 Multicopper oxidase JYK04_RS14650 PF00394 Multicopper oxidase JYK04_RS14660 PF02540 NAD synthase JYK04_RS14660 PF00795 Carbon-nitrogen hydrolase JYK04_RS14670 PF02548 Ketopantoate hydroxymethyltransferase JYK04_RS14675 PF00005 ABC transporter JYK04_RS14675 PF13732 Domain of unknown function (DUF4162) JYK04_RS14680 PF01061 ABC-2 type transporter JYK04_RS14685 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS14705 PF02342 TerD domain JYK04_RS14725 PF00557 Metallopeptidase family M24 JYK04_RS14730 PF01126 Heme oxygenase JYK04_RS14740 PF02567 Phenazine biosynthesis-like protein JYK04_RS14755 PF01497 Periplasmic binding protein JYK04_RS14760 PF01032 FecCD transport family JYK04_RS14765 PF00005 ABC transporter JYK04_RS14770 PF09375 Imelysin JYK04_RS14770 PF13473 Cupredoxin-like domain JYK04_RS14775 PF10518 TAT (twin-arginine translocation) pathway signal sequence JYK04_RS14775 PF04261 Dyp-type peroxidase family JYK04_RS14780 PF03239 Iron permease FTR1 family JYK04_RS14790 PF02567 Phenazine biosynthesis-like protein JYK04_RS14795 PF00106 short chain dehydrogenase JYK04_RS14800 PF07690 Major Facilitator Superfamily JYK04_RS14815 PF16859 Tetracyclin repressor-like, C-terminal domain JYK04_RS14815 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS14825 PF03883 Peroxide stress protein YaaA JYK04_RS14840 PF13411 MerR HTH family regulatory protein JYK04_RS14850 PF00300 Histidine phosphatase superfamily (branch 1) JYK04_RS14850 PF13456 Reverse transcriptase-like JYK04_RS14860 PF01784 NIF3 (NGG1p interacting factor 3) JYK04_RS14870 PF00106 short chain dehydrogenase JYK04_RS14875 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS14875 PF00107 Zinc-binding dehydrogenase JYK04_RS14880 PF01575 MaoC like domain JYK04_RS14890 PF08281 Sigma-70, region 4 JYK04_RS14890 PF04542 Sigma-70 region 2 JYK04_RS14910 PF02803 Thiolase, C-terminal domain JYK04_RS14910 PF00108 Thiolase, N-terminal domain JYK04_RS14915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS14915 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS14915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS14935 PF03466 LysR substrate binding domain JYK04_RS14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS14980 PF00069 Protein kinase domain JYK04_RS14980 PF13360 PQQ-like domain JYK04_RS14995 PF00069 Protein kinase domain JYK04_RS14995 PF03793 PASTA domain JYK04_RS15015 PF00296 Luciferase-like monooxygenase JYK04_RS15045 PF08241 Methyltransferase domain JYK04_RS15050 PF13439 Glycosyltransferase Family 4 JYK04_RS15050 PF00534 Glycosyl transferases group 1 JYK04_RS15055 PF17925 Tetracyclin repressor-like, C-terminal domain JYK04_RS15055 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS15070 PF00171 Aldehyde dehydrogenase family JYK04_RS15080 PF13249 Squalene-hopene cyclase N-terminal domain JYK04_RS15080 PF13243 Squalene-hopene cyclase C-terminal domain JYK04_RS15095 PF00005 ABC transporter JYK04_RS15110 PF00108 Thiolase, N-terminal domain JYK04_RS15110 PF02803 Thiolase, C-terminal domain JYK04_RS15115 PF00067 Cytochrome P450 JYK04_RS15125 PF12833 Helix-turn-helix domain JYK04_RS15125 PF01965 DJ-1/PfpI family JYK04_RS15130 PF00665 Integrase core domain JYK04_RS15160 PF07690 Major Facilitator Superfamily JYK04_RS15175 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS15180 PF04978 Protein of unknown function (DUF664) JYK04_RS15245 PF01596 O-methyltransferase JYK04_RS15255 PF15608 PELOTA RNA binding domain JYK04_RS15255 PF11202 Phosphoribosyl transferase (PRTase) JYK04_RS15270 PF02342 TerD domain JYK04_RS15280 PF02342 TerD domain JYK04_RS15285 PF02342 TerD domain JYK04_RS15290 PF00578 AhpC/TSA family JYK04_RS15300 PF00456 Transketolase, thiamine diphosphate binding domain JYK04_RS15300 PF17831 Pyruvate dehydrogenase E1 component middle domain JYK04_RS15305 PF00027 Cyclic nucleotide-binding domain JYK04_RS15305 PF00520 Ion transport protein JYK04_RS15315 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS15315 PF17754 MftR C-terminal domain JYK04_RS15330 PF00248 Aldo/keto reductase family JYK04_RS15335 PF13411 MerR HTH family regulatory protein JYK04_RS15345 PF02678 Pirin JYK04_RS15345 PF17954 Quercetinase C-terminal cupin domain JYK04_RS15350 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS15350 PF17853 GGDEF-like domain JYK04_RS15355 PF00698 Acyl transferase domain JYK04_RS15360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS15360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS15365 PF00550 Phosphopantetheine attachment site JYK04_RS15370 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS15370 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS15385 PF07691 PA14 domain JYK04_RS15385 PF14310 Fibronectin type III-like domain JYK04_RS15385 PF00933 Glycosyl hydrolase family 3 N terminal domain JYK04_RS15385 PF01915 Glycosyl hydrolase family 3 C-terminal domain JYK04_RS15390 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS15390 PF08362 YcdC-like protein, C-terminal region JYK04_RS15400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK04_RS15400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK04_RS15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS15405 PF03466 LysR substrate binding domain JYK04_RS15410 PF00795 Carbon-nitrogen hydrolase JYK04_RS15410 PF02540 NAD synthase JYK04_RS15420 PF01638 HxlR-like helix-turn-helix JYK04_RS15435 PF02566 OsmC-like protein JYK04_RS15440 PF16884 N-terminal domain of oxidoreductase JYK04_RS15440 PF00107 Zinc-binding dehydrogenase JYK04_RS15460 PF01674 Lipase (class 2) JYK04_RS15470 PF13492 GAF domain JYK04_RS15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS15470 PF07730 Histidine kinase JYK04_RS15470 PF13185 GAF domain JYK04_RS15480 PF01037 Lrp/AsnC ligand binding domain JYK04_RS15495 PF17848 Acetyl-coA carboxylase zinc finger domain JYK04_RS15495 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JYK04_RS15495 PF01039 Carboxyl transferase domain JYK04_RS15510 PF07883 Cupin domain JYK04_RS15515 PF05977 Transmembrane secretion effector JYK04_RS15520 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK04_RS15545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYK04_RS15545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYK04_RS15550 PF00664 ABC transporter transmembrane region JYK04_RS15550 PF00005 ABC transporter JYK04_RS15555 PF00005 ABC transporter JYK04_RS15555 PF00664 ABC transporter transmembrane region JYK04_RS15580 PF00384 Molybdopterin oxidoreductase JYK04_RS15580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYK04_RS15580 PF01568 Molydopterin dinucleotide binding domain JYK04_RS15595 PF02698 DUF218 domain JYK04_RS15605 PF01966 HD domain JYK04_RS15605 PF13286 Phosphohydrolase-associated domain JYK04_RS15610 PF14759 Reductase C-terminal JYK04_RS15610 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS15615 PF10410 DnaB-helicase binding domain of primase JYK04_RS15615 PF08278 DNA primase DnaG DnaB-binding JYK04_RS15615 PF13662 Toprim domain JYK04_RS15615 PF08275 DNA primase catalytic core, N-terminal domain JYK04_RS15615 PF01807 CHC2 zinc finger JYK04_RS15635 PF01925 Sulfite exporter TauE/SafE JYK04_RS15645 PF00970 Oxidoreductase FAD-binding domain JYK04_RS15645 PF00042 Globin JYK04_RS15645 PF00175 Oxidoreductase NAD-binding domain JYK04_RS15650 PF04324 BFD-like [2Fe-2S] binding domain JYK04_RS15650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYK04_RS15650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK04_RS15650 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS15650 PF18267 Rubredoxin NAD+ reductase C-terminal domain JYK04_RS15655 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS15655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK04_RS15655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYK04_RS15655 PF04324 BFD-like [2Fe-2S] binding domain JYK04_RS15655 PF13806 Rieske-like [2Fe-2S] domain JYK04_RS15655 PF18267 Rubredoxin NAD+ reductase C-terminal domain JYK04_RS15660 PF04324 BFD-like [2Fe-2S] binding domain JYK04_RS15660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYK04_RS15660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK04_RS15660 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS15660 PF13806 Rieske-like [2Fe-2S] domain JYK04_RS15660 PF18267 Rubredoxin NAD+ reductase C-terminal domain JYK04_RS15680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JYK04_RS15680 PF00391 PEP-utilising enzyme, mobile domain JYK04_RS15680 PF02896 PEP-utilising enzyme, TIM barrel domain JYK04_RS15685 PF01207 Dihydrouridine synthase (Dus) JYK04_RS15690 PF07690 Major Facilitator Superfamily JYK04_RS15705 PF00248 Aldo/keto reductase family JYK04_RS15710 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS15720 PF03129 Anticodon binding domain JYK04_RS15720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK04_RS15730 PF00005 ABC transporter JYK04_RS15735 PF00950 ABC 3 transport family JYK04_RS15740 PF01475 Ferric uptake regulator family JYK04_RS15750 PF01255 Putative undecaprenyl diphosphate synthase JYK04_RS15755 PF11967 Recombination protein O N terminal JYK04_RS15755 PF02565 Recombination protein O C terminal JYK04_RS15760 PF00860 Permease family JYK04_RS15775 PF08502 LeuA allosteric (dimerisation) domain JYK04_RS15775 PF00682 HMGL-like JYK04_RS15780 PF16485 Protealysin propeptide JYK04_RS15780 PF01447 Thermolysin metallopeptidase, catalytic domain JYK04_RS15780 PF02868 Thermolysin metallopeptidase, alpha-helical domain JYK04_RS15800 PF01926 50S ribosome-binding GTPase JYK04_RS15800 PF07650 KH domain JYK04_RS15810 PF12833 Helix-turn-helix domain JYK04_RS15810 PF01965 DJ-1/PfpI family JYK04_RS15815 PF07690 Major Facilitator Superfamily JYK04_RS15825 PF04237 YjbR JYK04_RS15830 PF03471 Transporter associated domain JYK04_RS15830 PF00571 CBS domain JYK04_RS15830 PF01595 Cyclin M transmembrane N-terminal domain JYK04_RS15835 PF02130 Uncharacterized protein family UPF0054 JYK04_RS15840 PF02562 PhoH-like protein JYK04_RS15845 PF00294 pfkB family carbohydrate kinase JYK04_RS15850 PF00753 Metallo-beta-lactamase superfamily JYK04_RS15850 PF12706 Beta-lactamase superfamily domain JYK04_RS15855 PF01230 HIT domain JYK04_RS15860 PF04452 RNA methyltransferase JYK04_RS15865 PF03060 Nitronate monooxygenase JYK04_RS15870 PF00226 DnaJ domain JYK04_RS15870 PF01556 DnaJ C terminal domain JYK04_RS15870 PF00684 DnaJ central domain JYK04_RS15875 PF01628 HrcA protein C terminal domain JYK04_RS15890 PF04055 Radical SAM superfamily JYK04_RS15895 PF00501 AMP-binding enzyme JYK04_RS15900 PF06421 GTP-binding protein LepA C-terminus JYK04_RS15900 PF00009 Elongation factor Tu GTP binding domain JYK04_RS15900 PF00679 Elongation factor G C-terminus JYK04_RS15900 PF03144 Elongation factor Tu domain 2 JYK04_RS15905 PF01649 Ribosomal protein S20 JYK04_RS15920 PF04264 YceI-like domain JYK04_RS15935 PF02645 Uncharacterised protein, DegV family COG1307 JYK04_RS15945 PF08264 Anticodon-binding domain of tRNA JYK04_RS15945 PF13603 Leucyl-tRNA synthetase, Domain 2 JYK04_RS15945 PF09334 tRNA synthetases class I (M) JYK04_RS15965 PF00300 Histidine phosphatase superfamily (branch 1) JYK04_RS15980 PF01467 Cytidylyltransferase-like JYK04_RS15990 PF01435 Peptidase family M48 JYK04_RS16005 PF00171 Aldehyde dehydrogenase family JYK04_RS16015 PF01472 PUA domain JYK04_RS16015 PF00696 Amino acid kinase family JYK04_RS16030 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JYK04_RS16030 PF00535 Glycosyl transferase family 2 JYK04_RS16035 PF13439 Glycosyltransferase Family 4 JYK04_RS16035 PF00534 Glycosyl transferases group 1 JYK04_RS16040 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS16045 PF00535 Glycosyl transferase family 2 JYK04_RS16050 PF09269 Domain of unknown function (DUF1967) JYK04_RS16050 PF01018 GTP1/OBG JYK04_RS16050 PF01926 50S ribosome-binding GTPase JYK04_RS16055 PF01016 Ribosomal L27 protein JYK04_RS16060 PF00829 Ribosomal prokaryotic L21 protein JYK04_RS16065 PF10150 Ribonuclease E/G family JYK04_RS16085 PF01928 CYTH domain JYK04_RS16085 PF05235 CHAD domain JYK04_RS16090 PF01098 Cell cycle protein JYK04_RS16095 PF03717 Penicillin-binding Protein dimerisation domain JYK04_RS16095 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS16115 PF00334 Nucleoside diphosphate kinase JYK04_RS16125 PF02875 Mur ligase family, glutamate ligase domain JYK04_RS16125 PF08245 Mur ligase middle domain JYK04_RS16140 PF08264 Anticodon-binding domain of tRNA JYK04_RS16140 PF00133 tRNA synthetases class I (I, L, M and V) JYK04_RS16140 PF10458 Valyl tRNA synthetase tRNA binding arm JYK04_RS16150 PF10431 C-terminal, D2-small domain, of ClpB protein JYK04_RS16150 PF06689 ClpX C4-type zinc finger JYK04_RS16150 PF07724 AAA domain (Cdc48 subfamily) JYK04_RS16155 PF00574 Clp protease JYK04_RS16160 PF00574 Clp protease JYK04_RS16165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYK04_RS16165 PF05698 Bacterial trigger factor protein (TF) C-terminus JYK04_RS16165 PF05697 Bacterial trigger factor protein (TF) JYK04_RS16200 PF00005 ABC transporter JYK04_RS16210 PF17668 Acetyltransferase (GNAT) domain JYK04_RS16210 PF13530 Sterol carrier protein domain JYK04_RS16215 PF06827 Zinc finger found in FPG and IleRS JYK04_RS16215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JYK04_RS16215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYK04_RS16220 PF02502 Ribose/Galactose Isomerase JYK04_RS16225 PF00324 Amino acid permease JYK04_RS16235 PF00324 Amino acid permease JYK04_RS16245 PF00324 Amino acid permease JYK04_RS16250 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JYK04_RS16250 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JYK04_RS16255 PF01323 DSBA-like thioredoxin domain JYK04_RS16260 PF01433 Peptidase family M1 domain JYK04_RS16260 PF11838 ERAP1-like C-terminal domain JYK04_RS16285 PF00082 Subtilase family JYK04_RS16290 PF02225 PA domain JYK04_RS16290 PF04389 Peptidase family M28 JYK04_RS16295 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYK04_RS16295 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYK04_RS16300 PF11838 ERAP1-like C-terminal domain JYK04_RS16300 PF01433 Peptidase family M1 domain JYK04_RS16305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS16305 PF03466 LysR substrate binding domain JYK04_RS16315 PF00892 EamA-like transporter family JYK04_RS16325 PF01047 MarR family JYK04_RS16335 PF02446 4-alpha-glucanotransferase JYK04_RS16340 PF00963 Cohesin domain JYK04_RS16340 PF00754 F5/8 type C domain JYK04_RS16340 PF00041 Fibronectin type III domain JYK04_RS16340 PF02838 Glycosyl hydrolase family 20, domain 2 JYK04_RS16340 PF07555 beta-N-acetylglucosaminidase JYK04_RS16350 PF00924 Mechanosensitive ion channel JYK04_RS16365 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS16370 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS16375 PF02056 Family 4 glycosyl hydrolase JYK04_RS16375 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYK04_RS16390 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK04_RS16400 PF16918 Protein kinase G tetratricopeptide repeat JYK04_RS16400 PF16919 Protein kinase G rubredoxin domain JYK04_RS16400 PF00069 Protein kinase domain JYK04_RS16425 PF01152 Bacterial-like globin JYK04_RS16440 PF00005 ABC transporter JYK04_RS16440 PF12848 ABC transporter JYK04_RS16460 PF00436 Single-strand binding protein family JYK04_RS16525 PF00145 C-5 cytosine-specific DNA methylase JYK04_RS16555 PF00155 Aminotransferase class I and II JYK04_RS16555 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS16570 PF01738 Dienelactone hydrolase family JYK04_RS16570 PF00156 Phosphoribosyl transferase domain JYK04_RS16580 PF00005 ABC transporter JYK04_RS16610 PF12849 PBP superfamily domain JYK04_RS16615 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS16620 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS16650 PF13360 PQQ-like domain JYK04_RS16650 PF00069 Protein kinase domain JYK04_RS16655 PF05922 Peptidase inhibitor I9 JYK04_RS16655 PF00082 Subtilase family JYK04_RS16670 PF00171 Aldehyde dehydrogenase family JYK04_RS16675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK04_RS16675 PF00205 Thiamine pyrophosphate enzyme, central domain JYK04_RS16675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK04_RS16680 PF04962 KduI/IolB family JYK04_RS16685 PF00294 pfkB family carbohydrate kinase JYK04_RS16695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK04_RS16695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK04_RS16705 PF03176 MMPL family JYK04_RS16720 PF00403 Heavy-metal-associated domain JYK04_RS16725 PF00285 Citrate synthase, C-terminal domain JYK04_RS16730 PF14490 Helix-hairpin-helix containing domain JYK04_RS16730 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JYK04_RS16730 PF13538 UvrD-like helicase C-terminal domain JYK04_RS16740 PF00583 Acetyltransferase (GNAT) family JYK04_RS16740 PF01047 MarR family JYK04_RS16745 PF00892 EamA-like transporter family JYK04_RS16750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS16750 PF03466 LysR substrate binding domain JYK04_RS16755 PF01915 Glycosyl hydrolase family 3 C-terminal domain JYK04_RS16755 PF00933 Glycosyl hydrolase family 3 N terminal domain JYK04_RS16760 PF05576 PS-10 peptidase S37 JYK04_RS16770 PF13499 EF-hand domain pair JYK04_RS16775 PF00005 ABC transporter JYK04_RS16775 PF00664 ABC transporter transmembrane region JYK04_RS16785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK04_RS16785 PF00205 Thiamine pyrophosphate enzyme, central domain JYK04_RS16785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK04_RS16790 PF00491 Arginase family JYK04_RS16795 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS16805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS16805 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS16805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS16825 PF15698 Phosphatase JYK04_RS16830 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS16835 PF01039 Carboxyl transferase domain JYK04_RS16840 PF00289 Biotin carboxylase, N-terminal domain JYK04_RS16840 PF02785 Biotin carboxylase C-terminal domain JYK04_RS16840 PF00364 Biotin-requiring enzyme JYK04_RS16840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK04_RS16845 PF00682 HMGL-like JYK04_RS16850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS16850 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS16850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS16865 PF04954 Siderophore-interacting protein JYK04_RS16865 PF08021 Siderophore-interacting FAD-binding domain JYK04_RS16870 PF00282 Pyridoxal-dependent decarboxylase conserved domain JYK04_RS16875 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JYK04_RS16885 PF06276 Ferric iron reductase FhuF-like transporter JYK04_RS16885 PF04183 IucA / IucC family JYK04_RS16895 PF00728 Glycosyl hydrolase family 20, catalytic domain JYK04_RS16895 PF02838 Glycosyl hydrolase family 20, domain 2 JYK04_RS16905 PF01380 SIS domain JYK04_RS16915 PF00582 Universal stress protein family JYK04_RS16925 PF12833 Helix-turn-helix domain JYK04_RS16925 PF01965 DJ-1/PfpI family JYK04_RS16930 PF00929 Exonuclease JYK04_RS16940 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS16950 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS16955 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS16960 PF00232 Glycosyl hydrolase family 1 JYK04_RS16990 PF00672 HAMP domain JYK04_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS16990 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS16990 PF16750 Sensor domain of 2-component histidine kinase JYK04_RS16995 PF00072 Response regulator receiver domain JYK04_RS16995 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS17020 PF00300 Histidine phosphatase superfamily (branch 1) JYK04_RS17075 PF03707 Bacterial signalling protein N terminal repeat JYK04_RS17075 PF00563 EAL domain JYK04_RS17075 PF00990 Diguanylate cyclase, GGDEF domain JYK04_RS17125 PF00704 Glycosyl hydrolases family 18 JYK04_RS17125 PF00553 Cellulose binding domain JYK04_RS17125 PF00041 Fibronectin type III domain JYK04_RS17130 PF00296 Luciferase-like monooxygenase JYK04_RS17145 PF00072 Response regulator receiver domain JYK04_RS17145 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS17155 PF00501 AMP-binding enzyme JYK04_RS17155 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS17160 PF18416 N-acetylglucosamine binding protein domain 2 JYK04_RS17160 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JYK04_RS17190 PF13344 Haloacid dehalogenase-like hydrolase JYK04_RS17200 PF01547 Bacterial extracellular solute-binding protein JYK04_RS17205 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS17210 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS17215 PF08402 TOBE domain JYK04_RS17215 PF00005 ABC transporter JYK04_RS17225 PF01266 FAD dependent oxidoreductase JYK04_RS17230 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS17230 PF07702 UTRA domain JYK04_RS17245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK04_RS17245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK04_RS17250 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYK04_RS17255 PF02096 60Kd inner membrane protein JYK04_RS17265 PF04203 Sortase domain JYK04_RS17280 PF03852 DNA mismatch endonuclease Vsr JYK04_RS17305 PF04286 Protein of unknown function (DUF445) JYK04_RS17310 PF08044 Domain of unknown function (DUF1707) JYK04_RS17315 PF00005 ABC transporter JYK04_RS17330 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS17330 PF00912 Transglycosylase JYK04_RS17335 PF00893 Small Multidrug Resistance protein JYK04_RS17350 PF00578 AhpC/TSA family JYK04_RS17370 PF01725 Ham1 family JYK04_RS17380 PF01138 3' exoribonuclease family, domain 1 JYK04_RS17380 PF03725 3' exoribonuclease family, domain 2 JYK04_RS17385 PF00367 phosphotransferase system, EIIB JYK04_RS17390 PF02378 Phosphotransferase system, EIIC JYK04_RS17395 PF02378 Phosphotransferase system, EIIC JYK04_RS17400 PF12706 Beta-lactamase superfamily domain JYK04_RS17410 PF04343 Protein of unknown function, DUF488 JYK04_RS17415 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS17420 PF02597 ThiS family JYK04_RS17425 PF14464 Prokaryotic homologs of the JAB domain JYK04_RS17430 PF00324 Amino acid permease JYK04_RS17440 PF02617 ATP-dependent Clp protease adaptor protein ClpS JYK04_RS17445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JYK04_RS17445 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JYK04_RS17450 PF00857 Isochorismatase family JYK04_RS17460 PF05547 Immune inhibitor A peptidase M6 JYK04_RS17460 PF00801 PKD domain JYK04_RS17480 PF04686 Streptomyces sporulation and cell division protein, SsgA JYK04_RS17485 PF01565 FAD binding domain JYK04_RS17485 PF02913 FAD linked oxidases, C-terminal domain JYK04_RS17495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK04_RS17510 PF07690 Major Facilitator Superfamily JYK04_RS17530 PF04851 Type III restriction enzyme, res subunit JYK04_RS17535 PF02661 Fic/DOC family JYK04_RS17575 PF00082 Subtilase family JYK04_RS17590 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK04_RS17590 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK04_RS17595 PF01799 [2Fe-2S] binding domain JYK04_RS17595 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS17600 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK04_RS17600 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK04_RS17605 PF07691 PA14 domain JYK04_RS17605 PF02838 Glycosyl hydrolase family 20, domain 2 JYK04_RS17605 PF00728 Glycosyl hydrolase family 20, catalytic domain JYK04_RS17615 PF02622 Uncharacterized ACR, COG1678 JYK04_RS17620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYK04_RS17625 PF00216 Bacterial DNA-binding protein JYK04_RS17630 PF03949 Malic enzyme, NAD binding domain JYK04_RS17630 PF00390 Malic enzyme, N-terminal domain JYK04_RS17635 PF13538 UvrD-like helicase C-terminal domain JYK04_RS17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS17660 PF03466 LysR substrate binding domain JYK04_RS17670 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JYK04_RS17675 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JYK04_RS17685 PF01668 SmpB protein JYK04_RS17690 PF13180 PDZ domain JYK04_RS17690 PF03572 Peptidase family S41 JYK04_RS17695 PF02687 FtsX-like permease family JYK04_RS17695 PF18075 FtsX extracellular domain JYK04_RS17700 PF00005 ABC transporter JYK04_RS17710 PF03462 PCRF domain JYK04_RS17710 PF00472 RF-1 domain JYK04_RS17720 PF00069 Protein kinase domain JYK04_RS17725 PF00069 Protein kinase domain JYK04_RS17730 PF01580 FtsK/SpoIIIE family JYK04_RS17740 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS17745 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS17750 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JYK04_RS17750 PF00535 Glycosyl transferase family 2 JYK04_RS17765 PF00005 ABC transporter JYK04_RS17765 PF01476 LysM domain JYK04_RS17770 PF05088 Bacterial NAD-glutamate dehydrogenase JYK04_RS17775 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS17790 PF01043 SecA preprotein cross-linking domain JYK04_RS17790 PF07516 SecA Wing and Scaffold domain JYK04_RS17790 PF07517 SecA DEAD-like domain JYK04_RS17805 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS17805 PF00072 Response regulator receiver domain JYK04_RS17810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JYK04_RS17810 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JYK04_RS17820 PF10646 Sporulation and spore germination JYK04_RS17820 PF10647 Lipoprotein LpqB beta-propeller domain JYK04_RS17825 PF00672 HAMP domain JYK04_RS17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS17825 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS17830 PF00072 Response regulator receiver domain JYK04_RS17830 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS17845 PF14258 Domain of unknown function (DUF4350) JYK04_RS17850 PF07726 ATPase family associated with various cellular activities (AAA) JYK04_RS17850 PF17863 AAA lid domain JYK04_RS17900 PF05221 S-adenosyl-L-homocysteine hydrolase JYK04_RS17900 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JYK04_RS17905 PF10502 Signal peptidase, peptidase S26 JYK04_RS17915 PF01238 Phosphomannose isomerase type I JYK04_RS17925 PF03966 Trm112p-like protein JYK04_RS17930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYK04_RS17930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYK04_RS17930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYK04_RS17930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYK04_RS17950 PF00534 Glycosyl transferases group 1 JYK04_RS17950 PF00535 Glycosyl transferase family 2 JYK04_RS17955 PF02467 Transcription factor WhiB JYK04_RS17965 PF01933 Uncharacterised protein family UPF0052 JYK04_RS17970 PF01996 F420-0:Gamma-glutamyl ligase JYK04_RS17970 PF00881 Nitroreductase family JYK04_RS17990 PF13399 LytR cell envelope-related transcriptional attenuator JYK04_RS17990 PF03816 Cell envelope-related transcriptional attenuator domain JYK04_RS17995 PF03816 Cell envelope-related transcriptional attenuator domain JYK04_RS18010 PF03816 Cell envelope-related transcriptional attenuator domain JYK04_RS18015 PF03061 Thioesterase superfamily JYK04_RS18020 PF03816 Cell envelope-related transcriptional attenuator domain JYK04_RS18025 PF00483 Nucleotidyl transferase JYK04_RS18035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS18035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS18035 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS18040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYK04_RS18040 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYK04_RS18040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYK04_RS18055 PF00731 AIR carboxylase JYK04_RS18060 PF02222 ATP-grasp domain JYK04_RS18060 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JYK04_RS18070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS18070 PF00672 HAMP domain JYK04_RS18070 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS18075 PF00072 Response regulator receiver domain JYK04_RS18075 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS18080 PF00854 POT family JYK04_RS18105 PF01979 Amidohydrolase family JYK04_RS18115 PF01546 Peptidase family M20/M25/M40 JYK04_RS18115 PF07687 Peptidase dimerisation domain JYK04_RS18120 PF17392 Urocanase C-terminal domain JYK04_RS18120 PF01175 Urocanase Rossmann-like domain JYK04_RS18120 PF17391 Urocanase N-terminal domain JYK04_RS18135 PF01494 FAD binding domain JYK04_RS18150 PF00571 CBS domain JYK04_RS18150 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS18155 PF13472 GDSL-like Lipase/Acylhydrolase family JYK04_RS18160 PF02803 Thiolase, C-terminal domain JYK04_RS18160 PF00108 Thiolase, N-terminal domain JYK04_RS18185 PF01494 FAD binding domain JYK04_RS18195 PF00005 ABC transporter JYK04_RS18200 PF02687 FtsX-like permease family JYK04_RS18200 PF12704 MacB-like periplasmic core domain JYK04_RS18210 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS18215 PF02541 Ppx/GppA phosphatase family JYK04_RS18230 PF03952 Enolase, N-terminal domain JYK04_RS18230 PF00113 Enolase, C-terminal TIM barrel domain JYK04_RS18235 PF06737 Transglycosylase-like domain JYK04_RS18240 PF07501 G5 domain JYK04_RS18240 PF03990 G5-linked-Ubiquitin-like domain JYK04_RS18240 PF06737 Transglycosylase-like domain JYK04_RS18245 PF00067 Cytochrome P450 JYK04_RS18250 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS18250 PF00175 Oxidoreductase NAD-binding domain JYK04_RS18250 PF00970 Oxidoreductase FAD-binding domain JYK04_RS18255 PF03819 MazG nucleotide pyrophosphohydrolase domain JYK04_RS18270 PF03793 PASTA domain JYK04_RS18270 PF00069 Protein kinase domain JYK04_RS18290 PF02559 CarD-like/TRCF domain JYK04_RS18290 PF00270 DEAD/DEAH box helicase JYK04_RS18290 PF03461 TRCF domain JYK04_RS18290 PF00271 Helicase conserved C-terminal domain JYK04_RS18290 PF17757 UvrB interaction domain JYK04_RS18300 PF12704 MacB-like periplasmic core domain JYK04_RS18300 PF02687 FtsX-like permease family JYK04_RS18305 PF00005 ABC transporter JYK04_RS18310 PF07690 Major Facilitator Superfamily JYK04_RS18325 PF00561 alpha/beta hydrolase fold JYK04_RS18360 PF07730 Histidine kinase JYK04_RS18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS18360 PF00672 HAMP domain JYK04_RS18370 PF12804 MobA-like NTP transferase domain JYK04_RS18370 PF00132 Bacterial transferase hexapeptide (six repeats) JYK04_RS18375 PF14572 Phosphoribosyl synthetase-associated domain JYK04_RS18375 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JYK04_RS18380 PF01386 Ribosomal L25p family JYK04_RS18380 PF14693 Ribosomal protein TL5, C-terminal domain JYK04_RS18385 PF01195 Peptidyl-tRNA hydrolase JYK04_RS18390 PF00311 Phosphoenolpyruvate carboxylase JYK04_RS18400 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS18400 PF17932 Tetracyclin repressor-like, C-terminal domain JYK04_RS18415 PF01047 MarR family JYK04_RS18420 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS18420 PF00072 Response regulator receiver domain JYK04_RS18425 PF16363 GDP-mannose 4,6 dehydratase JYK04_RS18430 PF00072 Response regulator receiver domain JYK04_RS18430 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS18450 PF12848 ABC transporter JYK04_RS18450 PF16326 ABC transporter C-terminal domain JYK04_RS18450 PF00005 ABC transporter JYK04_RS18460 PF08544 GHMP kinases C terminal JYK04_RS18460 PF00288 GHMP kinases N terminal domain JYK04_RS18465 PF00398 Ribosomal RNA adenine dimethylase JYK04_RS18470 PF06725 3D domain JYK04_RS18470 PF03990 G5-linked-Ubiquitin-like domain JYK04_RS18470 PF07501 G5 domain JYK04_RS18475 PF01026 TatD related DNase JYK04_RS18485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK04_RS18490 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase JYK04_RS18490 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JYK04_RS18510 PF03129 Anticodon binding domain JYK04_RS18510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK04_RS18510 PF04073 Aminoacyl-tRNA editing domain JYK04_RS18515 PF00144 Beta-lactamase JYK04_RS18520 PF00005 ABC transporter JYK04_RS18530 PF13190 PDGLE domain JYK04_RS18530 PF01891 Cobalt uptake substrate-specific transmembrane region JYK04_RS18540 PF03176 MMPL family JYK04_RS18545 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS18545 PF16859 Tetracyclin repressor-like, C-terminal domain JYK04_RS18550 PF07676 WD40-like Beta Propeller Repeat JYK04_RS18550 PF14684 Tricorn protease C1 domain JYK04_RS18550 PF14685 Tricorn protease PDZ domain JYK04_RS18550 PF03572 Peptidase family S41 JYK04_RS18565 PF00561 alpha/beta hydrolase fold JYK04_RS18580 PF03372 Endonuclease/Exonuclease/phosphatase family JYK04_RS18590 PF02515 CoA-transferase family III JYK04_RS18595 PF00248 Aldo/keto reductase family JYK04_RS18615 PF13302 Acetyltransferase (GNAT) domain JYK04_RS18620 PF00994 Probable molybdopterin binding domain JYK04_RS18620 PF01967 MoaC family JYK04_RS18625 PF01967 MoaC family JYK04_RS18630 PF00994 Probable molybdopterin binding domain JYK04_RS18630 PF03453 MoeA N-terminal region (domain I and II) JYK04_RS18630 PF03454 MoeA C-terminal region (domain IV) JYK04_RS18635 PF00483 Nucleotidyl transferase JYK04_RS18640 PF01812 5-formyltetrahydrofolate cyclo-ligase family JYK04_RS18645 PF01804 Penicillin amidase JYK04_RS18650 PF03471 Transporter associated domain JYK04_RS18650 PF00999 Sodium/hydrogen exchanger family JYK04_RS18650 PF02080 TrkA-C domain JYK04_RS18665 PF01048 Phosphorylase superfamily JYK04_RS18695 PF01741 Large-conductance mechanosensitive channel, MscL JYK04_RS18710 PF00067 Cytochrome P450 JYK04_RS18735 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS18735 PF08448 PAS fold JYK04_RS18735 PF13581 Histidine kinase-like ATPase domain JYK04_RS18735 PF13466 STAS domain JYK04_RS18745 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS18780 PF03023 Lipid II flippase MurJ JYK04_RS18790 PF02397 Bacterial sugar transferase JYK04_RS18795 PF13439 Glycosyltransferase Family 4 JYK04_RS18795 PF00534 Glycosyl transferases group 1 JYK04_RS18815 PF03777 ChpA-C JYK04_RS18820 PF03777 ChpA-C JYK04_RS18835 PF03777 ChpA-C JYK04_RS18865 PF00455 DeoR C terminal sensor domain JYK04_RS18865 PF08220 DeoR-like helix-turn-helix domain JYK04_RS18870 PF07690 Major Facilitator Superfamily JYK04_RS18880 PF04545 Sigma-70, region 4 JYK04_RS18880 PF00140 Sigma-70 factor, region 1.2 JYK04_RS18880 PF04542 Sigma-70 region 2 JYK04_RS18880 PF04539 Sigma-70 region 3 JYK04_RS18890 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYK04_RS18895 PF07690 Major Facilitator Superfamily JYK04_RS18915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS18915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS18920 PF00072 Response regulator receiver domain JYK04_RS18920 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS18925 PF00672 HAMP domain JYK04_RS18925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS18925 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS18930 PF00005 ABC transporter JYK04_RS18935 PF00005 ABC transporter JYK04_RS18935 PF02687 FtsX-like permease family JYK04_RS18935 PF12704 MacB-like periplasmic core domain JYK04_RS18980 PF08031 Berberine and berberine like JYK04_RS18980 PF01565 FAD binding domain JYK04_RS19000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS19000 PF00672 HAMP domain JYK04_RS19000 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS19015 PF07943 Penicillin-binding protein 5, C-terminal domain JYK04_RS19015 PF00768 D-alanyl-D-alanine carboxypeptidase JYK04_RS19045 PF00155 Aminotransferase class I and II JYK04_RS19090 PF00106 short chain dehydrogenase JYK04_RS19095 PF04055 Radical SAM superfamily JYK04_RS19100 PF13350 Tyrosine phosphatase family JYK04_RS19110 PF00296 Luciferase-like monooxygenase JYK04_RS19145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK04_RS19150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK04_RS19155 PF00376 MerR family regulatory protein JYK04_RS19155 PF09278 MerR, DNA binding JYK04_RS19170 PF13732 Domain of unknown function (DUF4162) JYK04_RS19170 PF00005 ABC transporter JYK04_RS19200 PF08713 DNA alkylation repair enzyme JYK04_RS19210 PF00171 Aldehyde dehydrogenase family JYK04_RS19215 PF07969 Amidohydrolase family JYK04_RS19220 PF00296 Luciferase-like monooxygenase JYK04_RS19230 PF00296 Luciferase-like monooxygenase JYK04_RS19245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS19245 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS19245 PF00672 HAMP domain JYK04_RS19250 PF00293 NUDIX domain JYK04_RS19280 PF00931 NB-ARC domain JYK04_RS19280 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS19280 PF03704 Bacterial transcriptional activator domain JYK04_RS19295 PF00501 AMP-binding enzyme JYK04_RS19295 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS19310 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS19320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYK04_RS19325 PF13360 PQQ-like domain JYK04_RS19325 PF00069 Protein kinase domain JYK04_RS19335 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS19345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS19345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS19345 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS19350 PF00108 Thiolase, N-terminal domain JYK04_RS19350 PF02803 Thiolase, C-terminal domain JYK04_RS19360 PF01243 Pyridoxamine 5'-phosphate oxidase JYK04_RS19360 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JYK04_RS19385 PF13607 Succinyl-CoA ligase like flavodoxin domain JYK04_RS19385 PF13380 CoA binding domain JYK04_RS19390 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS19405 PF01613 Flavin reductase like domain JYK04_RS19410 PF00768 D-alanyl-D-alanine carboxypeptidase JYK04_RS19415 PF00107 Zinc-binding dehydrogenase JYK04_RS19415 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS19420 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS19420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS19420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS19445 PF00561 alpha/beta hydrolase fold JYK04_RS19455 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS19455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS19455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS19460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS19460 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS19460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS19470 PF00501 AMP-binding enzyme JYK04_RS19470 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS19495 PF00551 Formyl transferase JYK04_RS19525 PF00005 ABC transporter JYK04_RS19540 PF00561 alpha/beta hydrolase fold JYK04_RS19545 PF18357 Diphteria toxin repressor SH3 domain JYK04_RS19545 PF02742 Iron dependent repressor, metal binding and dimerisation domain JYK04_RS19545 PF01325 Iron dependent repressor, N-terminal DNA binding domain JYK04_RS19550 PF13580 SIS domain JYK04_RS19565 PF01243 Pyridoxamine 5'-phosphate oxidase JYK04_RS19565 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JYK04_RS19570 PF00285 Citrate synthase, C-terminal domain JYK04_RS19585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS19585 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS19585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS19590 PF02785 Biotin carboxylase C-terminal domain JYK04_RS19590 PF00289 Biotin carboxylase, N-terminal domain JYK04_RS19590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK04_RS19590 PF00364 Biotin-requiring enzyme JYK04_RS19595 PF01039 Carboxyl transferase domain JYK04_RS19605 PF08608 Wyosine base formation JYK04_RS19605 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain JYK04_RS19620 PF00892 EamA-like transporter family JYK04_RS19625 PF02913 FAD linked oxidases, C-terminal domain JYK04_RS19625 PF01565 FAD binding domain JYK04_RS19625 PF13183 4Fe-4S dicluster domain JYK04_RS19630 PF00266 Aminotransferase class-V JYK04_RS19655 PF00860 Permease family JYK04_RS19665 PF01047 MarR family JYK04_RS19680 PF00248 Aldo/keto reductase family JYK04_RS19695 PF01145 SPFH domain / Band 7 family JYK04_RS19695 PF15975 Flotillin JYK04_RS19705 PF11228 Protein of unknown function (DUF3027) JYK04_RS19710 PF07690 Major Facilitator Superfamily JYK04_RS19720 PF01048 Phosphorylase superfamily JYK04_RS19725 PF02621 Menaquinone biosynthesis JYK04_RS19730 PF00313 'Cold-shock' DNA-binding domain JYK04_RS19775 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS19775 PF13305 Tetracyclin repressor-like, C-terminal domain JYK04_RS19780 PF00271 Helicase conserved C-terminal domain JYK04_RS19780 PF04851 Type III restriction enzyme, res subunit JYK04_RS19785 PF09594 Glycosyltransferase family 87 JYK04_RS19800 PF13538 UvrD-like helicase C-terminal domain JYK04_RS19805 PF03932 CutC family JYK04_RS19815 PF07690 Major Facilitator Superfamily JYK04_RS19820 PF00144 Beta-lactamase JYK04_RS19835 PF01380 SIS domain JYK04_RS19840 PF00367 phosphotransferase system, EIIB JYK04_RS19840 PF02378 Phosphotransferase system, EIIC JYK04_RS19880 PF05922 Peptidase inhibitor I9 JYK04_RS19880 PF00082 Subtilase family JYK04_RS19890 PF00082 Subtilase family JYK04_RS19890 PF05922 Peptidase inhibitor I9 JYK04_RS19910 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS19910 PF17925 Tetracyclin repressor-like, C-terminal domain JYK04_RS19920 PF07690 Major Facilitator Superfamily JYK04_RS19925 PF04673 Polyketide synthesis cyclase JYK04_RS19935 PF00072 Response regulator receiver domain JYK04_RS19935 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS19940 PF00067 Cytochrome P450 JYK04_RS19945 PF00975 Thioesterase domain JYK04_RS19960 PF04673 Polyketide synthesis cyclase JYK04_RS19965 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS19965 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS19970 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS19970 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS19975 PF00550 Phosphopantetheine attachment site JYK04_RS19980 PF00106 short chain dehydrogenase JYK04_RS19985 PF03364 Polyketide cyclase / dehydrase and lipid transport JYK04_RS20000 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JYK04_RS20005 PF00118 TCP-1/cpn60 chaperonin family JYK04_RS20010 PF00313 'Cold-shock' DNA-binding domain JYK04_RS20015 PF02597 ThiS family JYK04_RS20020 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS20025 PF00535 Glycosyl transferase family 2 JYK04_RS20030 PF05116 Sucrose-6F-phosphate phosphohydrolase JYK04_RS20030 PF00982 Glycosyltransferase family 20 JYK04_RS20035 PF02358 Trehalose-phosphatase JYK04_RS20045 PF01547 Bacterial extracellular solute-binding protein JYK04_RS20050 PF00480 ROK family JYK04_RS20055 PF01979 Amidohydrolase family JYK04_RS20060 PF00294 pfkB family carbohydrate kinase JYK04_RS20070 PF00990 Diguanylate cyclase, GGDEF domain JYK04_RS20070 PF03707 Bacterial signalling protein N terminal repeat JYK04_RS20070 PF00563 EAL domain JYK04_RS20075 PF01613 Flavin reductase like domain JYK04_RS20080 PF03462 PCRF domain JYK04_RS20080 PF00472 RF-1 domain JYK04_RS20085 PF02342 TerD domain JYK04_RS20100 PF17203 Single cache domain 3 JYK04_RS20100 PF00989 PAS fold JYK04_RS20100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS20100 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JYK04_RS20105 PF00072 Response regulator receiver domain JYK04_RS20105 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS20130 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JYK04_RS20155 PF02698 DUF218 domain JYK04_RS20160 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS20160 PF07702 UTRA domain JYK04_RS20195 PF17854 FtsK alpha domain JYK04_RS20195 PF09397 Ftsk gamma domain JYK04_RS20195 PF01580 FtsK/SpoIIIE family JYK04_RS20225 PF12307 Protein of unknown function (DUF3631) JYK04_RS20235 PF14659 Phage integrase, N-terminal SAM-like domain JYK04_RS20235 PF00589 Phage integrase family JYK04_RS20250 PF17912 MalK OB fold domain JYK04_RS20250 PF00005 ABC transporter JYK04_RS20260 PF00483 Nucleotidyl transferase JYK04_RS20270 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYK04_RS20270 PF00588 SpoU rRNA Methylase family JYK04_RS20275 PF01406 tRNA synthetases class I (C) catalytic domain JYK04_RS20275 PF09190 DALR domain JYK04_RS20280 PF02542 YgbB family JYK04_RS20285 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JYK04_RS20290 PF02559 CarD-like/TRCF domain JYK04_RS20300 PF00072 Response regulator receiver domain JYK04_RS20300 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS20305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS20305 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS20310 PF01895 PhoU domain JYK04_RS20340 PF00300 Histidine phosphatase superfamily (branch 1) JYK04_RS20355 PF10722 Putative bacterial sensory transduction regulator JYK04_RS20360 PF00534 Glycosyl transferases group 1 JYK04_RS20360 PF13439 Glycosyltransferase Family 4 JYK04_RS20370 PF00877 NlpC/P60 family JYK04_RS20390 PF01381 Helix-turn-helix JYK04_RS20405 PF05175 Methyltransferase small domain JYK04_RS20405 PF17827 PrmC N-terminal domain JYK04_RS20410 PF13530 Sterol carrier protein domain JYK04_RS20410 PF17668 Acetyltransferase (GNAT) domain JYK04_RS20420 PF02580 D-Tyr-tRNA(Tyr) deacylase JYK04_RS20425 PF01571 Aminomethyltransferase folate-binding domain JYK04_RS20430 PF01475 Ferric uptake regulator family JYK04_RS20435 PF08768 Domain of unknown function (DUF1794) JYK04_RS20460 PF07210 Protein of unknown function (DUF1416) JYK04_RS20465 PF00581 Rhodanese-like domain JYK04_RS20485 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS20490 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS20500 PF13180 PDZ domain JYK04_RS20505 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS20505 PF00072 Response regulator receiver domain JYK04_RS20510 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS20510 PF00672 HAMP domain JYK04_RS20515 PF00388 Phosphatidylinositol-specific phospholipase C, X domain JYK04_RS20525 PF00561 alpha/beta hydrolase fold JYK04_RS20530 PF02872 5'-nucleotidase, C-terminal domain JYK04_RS20530 PF00149 Calcineurin-like phosphoesterase JYK04_RS20530 PF17936 Bacterial Ig domain JYK04_RS20535 PF00583 Acetyltransferase (GNAT) family JYK04_RS20540 PF13089 Polyphosphate kinase N-terminal domain JYK04_RS20540 PF17941 Polyphosphate kinase C-terminal domain 1 JYK04_RS20540 PF02503 Polyphosphate kinase middle domain JYK04_RS20540 PF13090 Polyphosphate kinase C-terminal domain 2 JYK04_RS20550 PF12849 PBP superfamily domain JYK04_RS20555 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS20560 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS20565 PF00005 ABC transporter JYK04_RS20570 PF01384 Phosphate transporter family JYK04_RS20580 PF02583 Metal-sensitive transcriptional repressor JYK04_RS20600 PF01569 PAP2 superfamily JYK04_RS20605 PF01464 Transglycosylase SLT domain JYK04_RS20605 PF10145 Phage-related minor tail protein JYK04_RS20605 PF01551 Peptidase family M23 JYK04_RS20610 PF00069 Protein kinase domain JYK04_RS20610 PF00400 WD domain, G-beta repeat JYK04_RS20620 PF01810 LysE type translocator JYK04_RS20625 PF00805 Pentapeptide repeats (8 copies) JYK04_RS20630 PF12697 Alpha/beta hydrolase family JYK04_RS20705 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS20705 PF00107 Zinc-binding dehydrogenase JYK04_RS20750 PF08448 PAS fold JYK04_RS20750 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS20750 PF13466 STAS domain JYK04_RS20750 PF13581 Histidine kinase-like ATPase domain JYK04_RS20755 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS20770 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS20800 PF01266 FAD dependent oxidoreductase JYK04_RS20805 PF02390 Putative methyltransferase JYK04_RS20815 PF01551 Peptidase family M23 JYK04_RS20815 PF01464 Transglycosylase SLT domain JYK04_RS20815 PF10145 Phage-related minor tail protein JYK04_RS20865 PF04055 Radical SAM superfamily JYK04_RS20865 PF13186 Iron-sulfur cluster-binding domain JYK04_RS20875 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS20875 PF01434 Peptidase family M41 JYK04_RS20875 PF17862 AAA+ lid domain JYK04_RS20875 PF06480 FtsH Extracellular JYK04_RS20915 PF00271 Helicase conserved C-terminal domain JYK04_RS20915 PF00270 DEAD/DEAH box helicase JYK04_RS20925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JYK04_RS20930 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JYK04_RS20955 PF02683 Cytochrome C biogenesis protein transmembrane region JYK04_RS20960 PF13462 Thioredoxin JYK04_RS20960 PF06965 Na+/H+ antiporter 1 JYK04_RS20970 PF04408 Helicase associated domain (HA2) JYK04_RS20970 PF00270 DEAD/DEAH box helicase JYK04_RS20970 PF00271 Helicase conserved C-terminal domain JYK04_RS20970 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JYK04_RS20970 PF11898 Domain of unknown function (DUF3418) JYK04_RS20990 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JYK04_RS20990 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JYK04_RS21000 PF00586 AIR synthase related protein, N-terminal domain JYK04_RS21000 PF02769 AIR synthase related protein, C-terminal domain JYK04_RS21005 PF00156 Phosphoribosyl transferase domain JYK04_RS21010 PF16385 Domain of unknown function JYK04_RS21010 PF00884 Sulfatase JYK04_RS21030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JYK04_RS21030 PF02769 AIR synthase related protein, C-terminal domain JYK04_RS21030 PF00586 AIR synthase related protein, N-terminal domain JYK04_RS21040 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JYK04_RS21060 PF00005 ABC transporter JYK04_RS21075 PF00072 Response regulator receiver domain JYK04_RS21075 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS21085 PF01259 SAICAR synthetase JYK04_RS21100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JYK04_RS21100 PF02843 Phosphoribosylglycinamide synthetase, C domain JYK04_RS21100 PF02844 Phosphoribosylglycinamide synthetase, N domain JYK04_RS21105 PF12169 DNA polymerase III subunits gamma and tau domain III JYK04_RS21150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK04_RS21150 PF18029 Glyoxalase-like domain JYK04_RS21170 PF05872 Bacterial protein of unknown function (DUF853) JYK04_RS21190 PF00582 Universal stress protein family JYK04_RS21205 PF14437 MafB19-like deaminase JYK04_RS21225 PF04542 Sigma-70 region 2 JYK04_RS21225 PF04539 Sigma-70 region 3 JYK04_RS21225 PF04545 Sigma-70, region 4 JYK04_RS21230 PF04545 Sigma-70, region 4 JYK04_RS21230 PF04542 Sigma-70 region 2 JYK04_RS21230 PF04539 Sigma-70 region 3 JYK04_RS21250 PF07690 Major Facilitator Superfamily JYK04_RS21260 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase JYK04_RS21270 PF00672 HAMP domain JYK04_RS21270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS21270 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS21275 PF00072 Response regulator receiver domain JYK04_RS21275 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS21295 PF01037 Lrp/AsnC ligand binding domain JYK04_RS21295 PF13404 AsnC-type helix-turn-helix domain JYK04_RS21305 PF08000 Bacterial PH domain JYK04_RS21335 PF00501 AMP-binding enzyme JYK04_RS21335 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS21340 PF08281 Sigma-70, region 4 JYK04_RS21340 PF04542 Sigma-70 region 2 JYK04_RS21355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS21355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS21365 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS21365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS21365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS21380 PF12704 MacB-like periplasmic core domain JYK04_RS21380 PF02687 FtsX-like permease family JYK04_RS21380 PF00005 ABC transporter JYK04_RS21405 PF03601 Conserved hypothetical protein 698 JYK04_RS21415 PF03466 LysR substrate binding domain JYK04_RS21415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS21420 PF13180 PDZ domain JYK04_RS21425 PF03009 Glycerophosphoryl diester phosphodiesterase family JYK04_RS21435 PF07516 SecA Wing and Scaffold domain JYK04_RS21435 PF02810 SEC-C motif JYK04_RS21435 PF01043 SecA preprotein cross-linking domain JYK04_RS21435 PF07517 SecA DEAD-like domain JYK04_RS21455 PF00557 Metallopeptidase family M24 JYK04_RS21455 PF05195 Aminopeptidase P, N-terminal domain JYK04_RS21475 PF02630 SCO1/SenC JYK04_RS21485 PF04234 CopC domain JYK04_RS21490 PF04261 Dyp-type peroxidase family JYK04_RS21495 PF00800 Prephenate dehydratase JYK04_RS21495 PF01842 ACT domain JYK04_RS21500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK04_RS21500 PF02403 Seryl-tRNA synthetase N-terminal domain JYK04_RS21520 PF00072 Response regulator receiver domain JYK04_RS21520 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS21535 PF00005 ABC transporter JYK04_RS21545 PF00005 ABC transporter JYK04_RS21545 PF13732 Domain of unknown function (DUF4162) JYK04_RS21555 PF00561 alpha/beta hydrolase fold JYK04_RS21555 PF00106 short chain dehydrogenase JYK04_RS21565 PF13411 MerR HTH family regulatory protein JYK04_RS21570 PF00230 Major intrinsic protein JYK04_RS21575 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family JYK04_RS21580 PF00296 Luciferase-like monooxygenase JYK04_RS21590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS21590 PF13492 GAF domain JYK04_RS21590 PF07730 Histidine kinase JYK04_RS21590 PF13185 GAF domain JYK04_RS21595 PF00005 ABC transporter JYK04_RS21595 PF00664 ABC transporter transmembrane region JYK04_RS21600 PF02322 Cytochrome bd terminal oxidase subunit II JYK04_RS21605 PF01654 Cytochrome bd terminal oxidase subunit I JYK04_RS21615 PF00155 Aminotransferase class I and II JYK04_RS21620 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS21620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYK04_RS21635 PF13667 ThiC-associated domain JYK04_RS21635 PF01964 Radical SAM ThiC family JYK04_RS21655 PF17260 Family of unknown function (DUF5326) JYK04_RS21660 PF07883 Cupin domain JYK04_RS21665 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JYK04_RS21670 PF01451 Low molecular weight phosphotyrosine protein phosphatase JYK04_RS21675 PF01053 Cys/Met metabolism PLP-dependent enzyme JYK04_RS21680 PF03466 LysR substrate binding domain JYK04_RS21680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS21685 PF00293 NUDIX domain JYK04_RS21690 PF00970 Oxidoreductase FAD-binding domain JYK04_RS21690 PF00175 Oxidoreductase NAD-binding domain JYK04_RS21690 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS21705 PF00583 Acetyltransferase (GNAT) family JYK04_RS21715 PF00144 Beta-lactamase JYK04_RS21720 PF00772 DnaB-like helicase N terminal domain JYK04_RS21720 PF03796 DnaB-like helicase C terminal domain JYK04_RS21730 PF01281 Ribosomal protein L9, N-terminal domain JYK04_RS21730 PF03948 Ribosomal protein L9, C-terminal domain JYK04_RS21735 PF01084 Ribosomal protein S18 JYK04_RS21740 PF00436 Single-strand binding protein family JYK04_RS21745 PF01250 Ribosomal protein S6 JYK04_RS21770 PF00912 Transglycosylase JYK04_RS21770 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS21780 PF01658 Myo-inositol-1-phosphate synthase JYK04_RS21785 PF07690 Major Facilitator Superfamily JYK04_RS21790 PF01743 Poly A polymerase head domain JYK04_RS21790 PF12627 Probable RNA and SrmB- binding site of polymerase A JYK04_RS21790 PF13735 tRNA nucleotidyltransferase domain 2 putative JYK04_RS21800 PF03023 Lipid II flippase MurJ JYK04_RS21805 PF03793 PASTA domain JYK04_RS21805 PF00069 Protein kinase domain JYK04_RS21810 PF08281 Sigma-70, region 4 JYK04_RS21810 PF04542 Sigma-70 region 2 JYK04_RS21820 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS21825 PF00085 Thioredoxin JYK04_RS21835 PF02195 ParB-like nuclease domain JYK04_RS21835 PF17762 HTH domain found in ParB protein JYK04_RS21840 PF13614 AAA domain JYK04_RS21845 PF02527 rRNA small subunit methyltransferase G JYK04_RS21855 PF02096 60Kd inner membrane protein JYK04_RS21860 PF01809 Putative membrane protein insertion efficiency factor JYK04_RS21865 PF00825 Ribonuclease P JYK04_RS21870 PF00468 Ribosomal protein L34 JYK04_RS21875 PF00308 Bacterial dnaA protein JYK04_RS21875 PF08299 Bacterial dnaA protein helix-turn-helix JYK04_RS21880 PF00712 DNA polymerase III beta subunit, N-terminal domain JYK04_RS21880 PF02767 DNA polymerase III beta subunit, central domain JYK04_RS21880 PF02768 DNA polymerase III beta subunit, C-terminal domain JYK04_RS21885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK04_RS21885 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JYK04_RS21890 PF02463 RecF/RecN/SMC N terminal domain JYK04_RS21895 PF05258 Dna[CI] antecedent, DciA JYK04_RS21900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS21900 PF00986 DNA gyrase B subunit, carboxyl terminus JYK04_RS21900 PF00204 DNA gyrase B JYK04_RS21900 PF01751 Toprim domain JYK04_RS21905 PF03989 DNA gyrase C-terminal domain, beta-propeller JYK04_RS21905 PF00521 DNA gyrase/topoisomerase IV, subunit A JYK04_RS21910 PF12089 Transmembrane domain of unknown function (DUF3566) JYK04_RS21930 PF00069 Protein kinase domain JYK04_RS21945 PF01494 FAD binding domain JYK04_RS21965 PF08281 Sigma-70, region 4 JYK04_RS21965 PF04542 Sigma-70 region 2 JYK04_RS21970 PF03704 Bacterial transcriptional activator domain JYK04_RS21970 PF00931 NB-ARC domain JYK04_RS21970 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS21985 PF07859 alpha/beta hydrolase fold JYK04_RS21990 PF07690 Major Facilitator Superfamily JYK04_RS21995 PF02142 MGS-like domain JYK04_RS21995 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JYK04_RS21995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK04_RS22015 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA JYK04_RS22020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYK04_RS22020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYK04_RS22030 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JYK04_RS22040 PF01588 Putative tRNA binding domain JYK04_RS22040 PF09334 tRNA synthetases class I (M) JYK04_RS22045 PF07690 Major Facilitator Superfamily JYK04_RS22075 PF02655 ATP-grasp domain JYK04_RS22075 PF00206 Lyase JYK04_RS22090 PF03704 Bacterial transcriptional activator domain JYK04_RS22090 PF00931 NB-ARC domain JYK04_RS22090 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS22095 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS22095 PF00931 NB-ARC domain JYK04_RS22095 PF03704 Bacterial transcriptional activator domain JYK04_RS22115 PF17258 Family of unknown function (DUF5324) JYK04_RS22120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYK04_RS22125 PF01694 Rhomboid family JYK04_RS22130 PF06781 Cell division protein CrgA JYK04_RS22140 PF04203 Sortase domain JYK04_RS22150 PF00117 Glutamine amidotransferase class-I JYK04_RS22155 PF04203 Sortase domain JYK04_RS22160 PF04203 Sortase domain JYK04_RS22165 PF03793 PASTA domain JYK04_RS22165 PF00069 Protein kinase domain JYK04_RS22170 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS22175 PF01098 Cell cycle protein JYK04_RS22185 PF16697 Inner membrane component of T3SS, cytoplasmic domain JYK04_RS22190 PF12401 Protein of unknown function (DUF2662) JYK04_RS22190 PF00498 FHA domain JYK04_RS22205 PF00672 HAMP domain JYK04_RS22205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS22205 PF07730 Histidine kinase JYK04_RS22210 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS22210 PF00072 Response regulator receiver domain JYK04_RS22225 PF00581 Rhodanese-like domain JYK04_RS22235 PF00175 Oxidoreductase NAD-binding domain JYK04_RS22235 PF00970 Oxidoreductase FAD-binding domain JYK04_RS22235 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS22240 PF01883 Iron-sulfur cluster assembly protein JYK04_RS22245 PF05138 Phenylacetic acid catabolic protein JYK04_RS22250 PF06243 Phenylacetic acid degradation B JYK04_RS22255 PF05138 Phenylacetic acid catabolic protein JYK04_RS22285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK04_RS22285 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JYK04_RS22285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK04_RS22290 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS22290 PF18665 Tetracyclin repressor-like, C-terminal domain JYK04_RS22300 PF01037 Lrp/AsnC ligand binding domain JYK04_RS22300 PF13404 AsnC-type helix-turn-helix domain JYK04_RS22305 PF00676 Dehydrogenase E1 component JYK04_RS22310 PF02780 Transketolase, C-terminal domain JYK04_RS22310 PF02779 Transketolase, pyrimidine binding domain JYK04_RS22315 PF02817 e3 binding domain JYK04_RS22315 PF00364 Biotin-requiring enzyme JYK04_RS22315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYK04_RS22320 PF08659 KR domain JYK04_RS22320 PF00698 Acyl transferase domain JYK04_RS22320 PF14765 Polyketide synthase dehydratase JYK04_RS22320 PF00550 Phosphopantetheine attachment site JYK04_RS22320 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS22320 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS22320 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS22320 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS22325 PF02254 TrkA-N domain JYK04_RS22325 PF07885 Ion channel JYK04_RS22330 PF03453 MoeA N-terminal region (domain I and II) JYK04_RS22330 PF03454 MoeA C-terminal region (domain IV) JYK04_RS22330 PF00994 Probable molybdopterin binding domain JYK04_RS22335 PF12804 MobA-like NTP transferase domain JYK04_RS22340 PF10759 Protein of unknown function (DUF2587) JYK04_RS22350 PF12704 MacB-like periplasmic core domain JYK04_RS22350 PF02687 FtsX-like permease family JYK04_RS22350 PF00005 ABC transporter JYK04_RS22365 PF03793 PASTA domain JYK04_RS22365 PF00069 Protein kinase domain JYK04_RS22370 PF00069 Protein kinase domain JYK04_RS22370 PF03793 PASTA domain JYK04_RS22380 PF00072 Response regulator receiver domain JYK04_RS22380 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS22385 PF00676 Dehydrogenase E1 component JYK04_RS22390 PF02780 Transketolase, C-terminal domain JYK04_RS22390 PF02779 Transketolase, pyrimidine binding domain JYK04_RS22395 PF02817 e3 binding domain JYK04_RS22395 PF00364 Biotin-requiring enzyme JYK04_RS22395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYK04_RS22430 PF00155 Aminotransferase class I and II JYK04_RS22430 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS22435 PF01494 FAD binding domain JYK04_RS22455 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS22455 PF07729 FCD domain JYK04_RS22460 PF07690 Major Facilitator Superfamily JYK04_RS22475 PF00795 Carbon-nitrogen hydrolase JYK04_RS22510 PF17991 Thioredoxin like C-terminal domain JYK04_RS22510 PF00578 AhpC/TSA family JYK04_RS22510 PF02683 Cytochrome C biogenesis protein transmembrane region JYK04_RS22515 PF02127 Aminopeptidase I zinc metalloprotease (M18) JYK04_RS22520 PF12323 Helix-turn-helix domain JYK04_RS22520 PF01385 Probable transposase JYK04_RS22520 PF07282 Putative transposase DNA-binding domain JYK04_RS22520 PF12323 Helix-turn-helix domain JYK04_RS22520 PF01385 Probable transposase JYK04_RS22520 PF07282 Putative transposase DNA-binding domain JYK04_RS22530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS22530 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS22530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS22530 PF12806 Acetyl-CoA dehydrogenase C-terminal like JYK04_RS22550 PF02678 Pirin JYK04_RS22550 PF05726 Pirin C-terminal cupin domain JYK04_RS22555 PF01594 AI-2E family transporter JYK04_RS22565 PF01336 OB-fold nucleic acid binding domain JYK04_RS22565 PF00152 tRNA synthetases class II (D, K and N) JYK04_RS22565 PF02938 GAD domain JYK04_RS22580 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS22580 PF00672 HAMP domain JYK04_RS22580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS22590 PF12805 FUSC-like inner membrane protein yccS JYK04_RS22650 PF01014 Uricase JYK04_RS22655 PF00202 Aminotransferase class-III JYK04_RS22675 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS22685 PF00313 'Cold-shock' DNA-binding domain JYK04_RS22705 PF08031 Berberine and berberine like JYK04_RS22705 PF01565 FAD binding domain JYK04_RS22720 PF07885 Ion channel JYK04_RS22735 PF07690 Major Facilitator Superfamily JYK04_RS22745 PF13460 NAD(P)H-binding JYK04_RS22770 PF00561 alpha/beta hydrolase fold JYK04_RS22770 PF08386 TAP-like protein JYK04_RS22790 PF01494 FAD binding domain JYK04_RS22800 PF02583 Metal-sensitive transcriptional repressor JYK04_RS22810 PF01925 Sulfite exporter TauE/SafE JYK04_RS22815 PF00581 Rhodanese-like domain JYK04_RS22820 PF00581 Rhodanese-like domain JYK04_RS22820 PF00753 Metallo-beta-lactamase superfamily JYK04_RS22835 PF05593 RHS Repeat JYK04_RS22835 PF03527 RHS protein JYK04_RS22870 PF00067 Cytochrome P450 JYK04_RS22875 PF00248 Aldo/keto reductase family JYK04_RS22885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JYK04_RS22885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JYK04_RS22890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK04_RS22890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK04_RS22905 PF13537 Glutamine amidotransferase domain JYK04_RS22905 PF00733 Asparagine synthase JYK04_RS22935 PF00005 ABC transporter JYK04_RS22950 PF07730 Histidine kinase JYK04_RS22955 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS22955 PF00072 Response regulator receiver domain JYK04_RS22965 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS22965 PF02909 Tetracyclin repressor-like, C-terminal domain JYK04_RS22970 PF07690 Major Facilitator Superfamily JYK04_RS23005 PF03006 Haemolysin-III related JYK04_RS23030 PF05532 CsbD-like JYK04_RS23045 PF00011 Hsp20/alpha crystallin family JYK04_RS23080 PF00270 DEAD/DEAH box helicase JYK04_RS23080 PF00271 Helicase conserved C-terminal domain JYK04_RS23085 PF00313 'Cold-shock' DNA-binding domain JYK04_RS23095 PF00692 dUTPase JYK04_RS23120 PF02397 Bacterial sugar transferase JYK04_RS23125 PF00012 Hsp70 protein JYK04_RS23130 PF01025 GrpE JYK04_RS23135 PF00684 DnaJ central domain JYK04_RS23135 PF01556 DnaJ C terminal domain JYK04_RS23135 PF00226 DnaJ domain JYK04_RS23140 PF13411 MerR HTH family regulatory protein JYK04_RS23160 PF10431 C-terminal, D2-small domain, of ClpB protein JYK04_RS23160 PF02861 Clp amino terminal domain, pathogenicity island component JYK04_RS23160 PF17871 AAA lid domain JYK04_RS23160 PF07724 AAA domain (Cdc48 subfamily) JYK04_RS23160 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS23190 PF00155 Aminotransferase class I and II JYK04_RS23220 PF00156 Phosphoribosyl transferase domain JYK04_RS23225 PF01116 Fructose-bisphosphate aldolase class-II JYK04_RS23235 PF03301 Tryptophan 2,3-dioxygenase JYK04_RS23240 PF00266 Aminotransferase class-V JYK04_RS23270 PF00709 Adenylosuccinate synthetase JYK04_RS23285 PF17760 UvrA interaction domain JYK04_RS23285 PF17755 UvrA DNA-binding domain JYK04_RS23285 PF00005 ABC transporter JYK04_RS23290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK04_RS23305 PF13732 Domain of unknown function (DUF4162) JYK04_RS23305 PF00005 ABC transporter JYK04_RS23315 PF00067 Cytochrome P450 JYK04_RS23320 PF00072 Response regulator receiver domain JYK04_RS23320 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS23325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS23325 PF05384 Sensor protein DegS JYK04_RS23325 PF07730 Histidine kinase JYK04_RS23330 PF00072 Response regulator receiver domain JYK04_RS23330 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS23335 PF07730 Histidine kinase JYK04_RS23355 PF01965 DJ-1/PfpI family JYK04_RS23360 PF00202 Aminotransferase class-III JYK04_RS23365 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS23365 PF07729 FCD domain JYK04_RS23380 PF02575 YbaB/EbfC DNA-binding family JYK04_RS23385 PF02132 RecR protein JYK04_RS23385 PF13662 Toprim domain JYK04_RS23385 PF00633 Helix-hairpin-helix motif JYK04_RS23395 PF00696 Amino acid kinase family JYK04_RS23395 PF01842 ACT domain JYK04_RS23395 PF13840 ACT domain JYK04_RS23400 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYK04_RS23400 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYK04_RS23405 PF08281 Sigma-70, region 4 JYK04_RS23405 PF04542 Sigma-70 region 2 JYK04_RS23420 PF00326 Prolyl oligopeptidase family JYK04_RS23430 PF07969 Amidohydrolase family JYK04_RS23450 PF12802 MarR family JYK04_RS23475 PF00149 Calcineurin-like phosphoesterase JYK04_RS23475 PF10518 TAT (twin-arginine translocation) pathway signal sequence JYK04_RS23485 PF00912 Transglycosylase JYK04_RS23485 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS23485 PF17092 Penicillin-binding protein OB-like domain JYK04_RS23490 PF02467 Transcription factor WhiB JYK04_RS23495 PF02374 Anion-transporting ATPase JYK04_RS23495 PF17886 HSP20-like domain found in ArsA JYK04_RS23500 PF02374 Anion-transporting ATPase JYK04_RS23520 PF16123 Hydroxyacylglutathione hydrolase C-terminus JYK04_RS23520 PF00753 Metallo-beta-lactamase superfamily JYK04_RS23535 PF00027 Cyclic nucleotide-binding domain JYK04_RS23535 PF13545 Crp-like helix-turn-helix domain JYK04_RS23540 PF00730 HhH-GPD superfamily base excision DNA repair protein JYK04_RS23540 PF00633 Helix-hairpin-helix motif JYK04_RS23540 PF10576 Iron-sulfur binding domain of endonuclease III JYK04_RS23545 PF00293 NUDIX domain JYK04_RS23550 PF02674 Colicin V production protein JYK04_RS23555 PF00561 alpha/beta hydrolase fold JYK04_RS23565 PF06965 Na+/H+ antiporter 1 JYK04_RS23570 PF00501 AMP-binding enzyme JYK04_RS23570 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS23570 PF16177 Acetyl-coenzyme A synthetase N-terminus JYK04_RS23575 PF00484 Carbonic anhydrase JYK04_RS23605 PF00437 Type II/IV secretion system protein JYK04_RS23635 PF00270 DEAD/DEAH box helicase JYK04_RS23635 PF00271 Helicase conserved C-terminal domain JYK04_RS23635 PF09369 Domain of unknown function (DUF1998) JYK04_RS23640 PF01740 STAS domain JYK04_RS23645 PF13581 Histidine kinase-like ATPase domain JYK04_RS23650 PF03030 Inorganic H+ pyrophosphatase JYK04_RS23660 PF05175 Methyltransferase small domain JYK04_RS23660 PF17827 PrmC N-terminal domain JYK04_RS23665 PF01751 Toprim domain JYK04_RS23665 PF13368 Topoisomerase C-terminal repeat JYK04_RS23665 PF01131 DNA topoisomerase JYK04_RS23670 PF02223 Thymidylate kinase JYK04_RS23675 PF12169 DNA polymerase III subunits gamma and tau domain III JYK04_RS23680 PF00561 alpha/beta hydrolase fold JYK04_RS23690 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS23690 PF08359 YsiA-like protein, C-terminal region JYK04_RS23700 PF03621 MbtH-like protein JYK04_RS23705 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS23715 PF03466 LysR substrate binding domain JYK04_RS23715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS23720 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYK04_RS23720 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYK04_RS23725 PF03358 NADPH-dependent FMN reductase JYK04_RS23730 PF00975 Thioesterase domain JYK04_RS23735 PF00550 Phosphopantetheine attachment site JYK04_RS23735 PF00501 AMP-binding enzyme JYK04_RS23735 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS23735 PF00668 Condensation domain JYK04_RS23740 PF00550 Phosphopantetheine attachment site JYK04_RS23740 PF00501 AMP-binding enzyme JYK04_RS23740 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS23740 PF00668 Condensation domain JYK04_RS23740 PF00975 Thioesterase domain JYK04_RS23745 PF00550 Phosphopantetheine attachment site JYK04_RS23745 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS23745 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS23745 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS23745 PF00668 Condensation domain JYK04_RS23745 PF00698 Acyl transferase domain JYK04_RS23750 PF00296 Luciferase-like monooxygenase JYK04_RS23755 PF00668 Condensation domain JYK04_RS23755 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS23755 PF00501 AMP-binding enzyme JYK04_RS23755 PF00550 Phosphopantetheine attachment site JYK04_RS23765 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS23765 PF00501 AMP-binding enzyme JYK04_RS23765 PF00550 Phosphopantetheine attachment site JYK04_RS23765 PF00668 Condensation domain JYK04_RS23770 PF00501 AMP-binding enzyme JYK04_RS23770 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS23770 PF00550 Phosphopantetheine attachment site JYK04_RS23770 PF00668 Condensation domain JYK04_RS23775 PF00550 Phosphopantetheine attachment site JYK04_RS23775 PF00668 Condensation domain JYK04_RS23775 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS23775 PF00501 AMP-binding enzyme JYK04_RS23780 PF02222 ATP-grasp domain JYK04_RS23810 PF00144 Beta-lactamase JYK04_RS23830 PF01612 3'-5' exonuclease JYK04_RS23830 PF00476 DNA polymerase family A JYK04_RS23830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JYK04_RS23830 PF01367 5'-3' exonuclease, C-terminal SAM fold JYK04_RS23840 PF01638 HxlR-like helix-turn-helix JYK04_RS23850 PF02416 mttA/Hcf106 family JYK04_RS23870 PF00171 Aldehyde dehydrogenase family JYK04_RS23875 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS23875 PF03717 Penicillin-binding Protein dimerisation domain JYK04_RS23880 PF04978 Protein of unknown function (DUF664) JYK04_RS23890 PF00005 ABC transporter JYK04_RS23890 PF13732 Domain of unknown function (DUF4162) JYK04_RS23895 PF01061 ABC-2 type transporter JYK04_RS23900 PF13411 MerR HTH family regulatory protein JYK04_RS23900 PF07739 TipAS antibiotic-recognition domain JYK04_RS23905 PF09335 SNARE associated Golgi protein JYK04_RS23915 PF00719 Inorganic pyrophosphatase JYK04_RS23920 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JYK04_RS23930 PF09179 TilS substrate binding domain JYK04_RS23930 PF01171 PP-loop family JYK04_RS23935 PF00156 Phosphoribosyl transferase domain JYK04_RS23940 PF17862 AAA+ lid domain JYK04_RS23940 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS23940 PF06480 FtsH Extracellular JYK04_RS23940 PF01434 Peptidase family M41 JYK04_RS23945 PF01227 GTP cyclohydrolase I JYK04_RS23955 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JYK04_RS23960 PF02152 Dihydroneopterin aldolase JYK04_RS23970 PF00809 Pterin binding enzyme JYK04_RS23975 PF16995 Transmembrane region of lysyl-tRNA synthetase JYK04_RS23975 PF00152 tRNA synthetases class II (D, K and N) JYK04_RS23975 PF09924 Uncharacterised conserved protein (DUF2156) JYK04_RS23975 PF01336 OB-fold nucleic acid binding domain JYK04_RS23985 PF00005 ABC transporter JYK04_RS23985 PF00571 CBS domain JYK04_RS23990 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS23995 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS24000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYK04_RS24010 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS24015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK04_RS24015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK04_RS24040 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JYK04_RS24055 PF00072 Response regulator receiver domain JYK04_RS24055 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS24060 PF07730 Histidine kinase JYK04_RS24060 PF05384 Sensor protein DegS JYK04_RS24060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS24070 PF02225 PA domain JYK04_RS24070 PF04389 Peptidase family M28 JYK04_RS24075 PF01022 Bacterial regulatory protein, arsR family JYK04_RS24085 PF03309 Type III pantothenate kinase JYK04_RS24090 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JYK04_RS24090 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JYK04_RS24095 PF00890 FAD binding domain JYK04_RS24095 PF02910 Fumarate reductase flavoprotein C-term JYK04_RS24100 PF02569 Pantoate-beta-alanine ligase JYK04_RS24135 PF00583 Acetyltransferase (GNAT) family JYK04_RS24140 PF11774 Lsr2 JYK04_RS24150 PF07724 AAA domain (Cdc48 subfamily) JYK04_RS24150 PF10431 C-terminal, D2-small domain, of ClpB protein JYK04_RS24150 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS24150 PF02861 Clp amino terminal domain, pathogenicity island component JYK04_RS24150 PF17871 AAA lid domain JYK04_RS24165 PF01551 Peptidase family M23 JYK04_RS24175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS24175 PF00672 HAMP domain JYK04_RS24175 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS24180 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS24180 PF00072 Response regulator receiver domain JYK04_RS24190 PF08281 Sigma-70, region 4 JYK04_RS24190 PF04542 Sigma-70 region 2 JYK04_RS24195 PF10576 Iron-sulfur binding domain of endonuclease III JYK04_RS24195 PF00633 Helix-hairpin-helix motif JYK04_RS24195 PF00730 HhH-GPD superfamily base excision DNA repair protein JYK04_RS24205 PF02457 DisA bacterial checkpoint controller nucleotide-binding JYK04_RS24205 PF10635 DisA bacterial checkpoint controller linker region JYK04_RS24205 PF12826 Helix-hairpin-helix motif JYK04_RS24210 PF18073 Rubredoxin metal binding domain JYK04_RS24230 PF02541 Ppx/GppA phosphatase family JYK04_RS24240 PF01261 Xylose isomerase-like TIM barrel JYK04_RS24250 PF00920 Dehydratase family JYK04_RS24255 PF13360 PQQ-like domain JYK04_RS24255 PF00069 Protein kinase domain JYK04_RS24270 PF00005 ABC transporter JYK04_RS24280 PF03807 NADP oxidoreductase coenzyme F420-dependent JYK04_RS24280 PF14748 Pyrroline-5-carboxylate reductase dimerisation JYK04_RS24285 PF00579 tRNA synthetases class I (W and Y) JYK04_RS24305 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS24315 PF00850 Histone deacetylase domain JYK04_RS24320 PF15698 Phosphatase JYK04_RS24325 PF12728 Helix-turn-helix domain JYK04_RS24335 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS24340 PF01553 Acyltransferase JYK04_RS24350 PF08281 Sigma-70, region 4 JYK04_RS24350 PF04542 Sigma-70 region 2 JYK04_RS24360 PF05768 Glutaredoxin-like domain (DUF836) JYK04_RS24365 PF02629 CoA binding domain JYK04_RS24365 PF06971 Putative DNA-binding protein N-terminus JYK04_RS24370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JYK04_RS24370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JYK04_RS24370 PF01488 Shikimate / quinate 5-dehydrogenase JYK04_RS24375 PF03900 Porphobilinogen deaminase, C-terminal domain JYK04_RS24375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JYK04_RS24380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK04_RS24380 PF14824 Sirohaem biosynthesis protein central JYK04_RS24380 PF10414 Sirohaem synthase dimerisation region JYK04_RS24390 PF01965 DJ-1/PfpI family JYK04_RS24400 PF00490 Delta-aminolevulinic acid dehydratase JYK04_RS24440 PF08962 Domain of unknown function (DUF1876) JYK04_RS24445 PF01061 ABC-2 type transporter JYK04_RS24450 PF13732 Domain of unknown function (DUF4162) JYK04_RS24450 PF00005 ABC transporter JYK04_RS24455 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS24460 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS24460 PF03472 Autoinducer binding domain JYK04_RS24490 PF00005 ABC transporter JYK04_RS24495 PF02687 FtsX-like permease family JYK04_RS24495 PF12704 MacB-like periplasmic core domain JYK04_RS24520 PF18029 Glyoxalase-like domain JYK04_RS24520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK04_RS24530 PF03485 Arginyl tRNA synthetase N terminal domain JYK04_RS24530 PF00750 tRNA synthetases class I (R) JYK04_RS24530 PF05746 DALR anticodon binding domain JYK04_RS24535 PF01921 tRNA synthetases class I (K) JYK04_RS24555 PF01139 tRNA-splicing ligase RtcB JYK04_RS24570 PF00106 short chain dehydrogenase JYK04_RS24585 PF01638 HxlR-like helix-turn-helix JYK04_RS24590 PF00107 Zinc-binding dehydrogenase JYK04_RS24590 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS24610 PF02687 FtsX-like permease family JYK04_RS24610 PF12704 MacB-like periplasmic core domain JYK04_RS24610 PF00005 ABC transporter JYK04_RS24615 PF00005 ABC transporter JYK04_RS24615 PF02687 FtsX-like permease family JYK04_RS24615 PF12704 MacB-like periplasmic core domain JYK04_RS24625 PF00202 Aminotransferase class-III JYK04_RS24630 PF00300 Histidine phosphatase superfamily (branch 1) JYK04_RS24640 PF08534 Redoxin JYK04_RS24645 PF05140 ResB-like family JYK04_RS24650 PF01578 Cytochrome C assembly protein JYK04_RS24665 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JYK04_RS24675 PF01040 UbiA prenyltransferase family JYK04_RS24690 PF02441 Flavoprotein JYK04_RS24705 PF04055 Radical SAM superfamily JYK04_RS24720 PF00375 Sodium:dicarboxylate symporter family JYK04_RS24755 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS24760 PF00501 AMP-binding enzyme JYK04_RS24765 PF00561 alpha/beta hydrolase fold JYK04_RS24780 PF00313 'Cold-shock' DNA-binding domain JYK04_RS24785 PF02621 Menaquinone biosynthesis JYK04_RS24790 PF13360 PQQ-like domain JYK04_RS24790 PF00069 Protein kinase domain JYK04_RS24795 PF04055 Radical SAM superfamily JYK04_RS24815 PF01209 ubiE/COQ5 methyltransferase family JYK04_RS24820 PF04960 Glutaminase JYK04_RS24830 PF01494 FAD binding domain JYK04_RS24840 PF12704 MacB-like periplasmic core domain JYK04_RS24840 PF02687 FtsX-like permease family JYK04_RS24845 PF02687 FtsX-like permease family JYK04_RS24845 PF12704 MacB-like periplasmic core domain JYK04_RS24845 PF00005 ABC transporter JYK04_RS24870 PF00877 NlpC/P60 family JYK04_RS24875 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JYK04_RS24880 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JYK04_RS24885 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JYK04_RS24890 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JYK04_RS24900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYK04_RS24900 PF10531 SLBB domain JYK04_RS24900 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JYK04_RS24905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYK04_RS24905 PF01568 Molydopterin dinucleotide binding domain JYK04_RS24905 PF00384 Molybdopterin oxidoreductase JYK04_RS24905 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JYK04_RS24910 PF00146 NADH dehydrogenase JYK04_RS24915 PF12838 4Fe-4S dicluster domain JYK04_RS24920 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JYK04_RS24925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JYK04_RS24930 PF00361 Proton-conducting membrane transporter JYK04_RS24930 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JYK04_RS24935 PF00361 Proton-conducting membrane transporter JYK04_RS24940 PF00361 Proton-conducting membrane transporter JYK04_RS24950 PF00890 FAD binding domain JYK04_RS24950 PF02910 Fumarate reductase flavoprotein C-term JYK04_RS24955 PF00005 ABC transporter JYK04_RS24960 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS24975 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS24975 PF07702 UTRA domain JYK04_RS24990 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JYK04_RS24990 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JYK04_RS24995 PF00348 Polyprenyl synthetase JYK04_RS25015 PF04389 Peptidase family M28 JYK04_RS25015 PF01483 Proprotein convertase P-domain JYK04_RS25020 PF00892 EamA-like transporter family JYK04_RS25025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK04_RS25030 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JYK04_RS25030 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JYK04_RS25030 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JYK04_RS25035 PF00072 Response regulator receiver domain JYK04_RS25035 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS25050 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JYK04_RS25055 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JYK04_RS25060 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JYK04_RS25065 PF00146 NADH dehydrogenase JYK04_RS25070 PF00037 4Fe-4S binding domain JYK04_RS25075 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JYK04_RS25080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JYK04_RS25085 PF00361 Proton-conducting membrane transporter JYK04_RS25085 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JYK04_RS25085 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JYK04_RS25090 PF00361 Proton-conducting membrane transporter JYK04_RS25090 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus JYK04_RS25095 PF00361 Proton-conducting membrane transporter JYK04_RS25100 PF01435 Peptidase family M48 JYK04_RS25105 PF03733 Inner membrane component domain JYK04_RS25115 PF13520 Amino acid permease JYK04_RS25120 PF01740 STAS domain JYK04_RS25120 PF00916 Sulfate permease family JYK04_RS25125 PF04461 Protein of unknown function (DUF520) JYK04_RS25145 PF13460 NAD(P)H-binding JYK04_RS25165 PF00471 Ribosomal protein L33 JYK04_RS25170 PF13452 N-terminal half of MaoC dehydratase JYK04_RS25185 PF07690 Major Facilitator Superfamily JYK04_RS25195 PF01565 FAD binding domain JYK04_RS25195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JYK04_RS25205 PF00962 Adenosine/AMP deaminase JYK04_RS25210 PF00155 Aminotransferase class I and II JYK04_RS25220 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JYK04_RS25225 PF02357 Transcription termination factor nusG JYK04_RS25230 PF00298 Ribosomal protein L11, RNA binding domain JYK04_RS25230 PF03946 Ribosomal protein L11, N-terminal domain JYK04_RS25235 PF00687 Ribosomal protein L1p/L10e family JYK04_RS25250 PF00466 Ribosomal protein L10 JYK04_RS25255 PF00542 Ribosomal protein L7/L12 C-terminal domain JYK04_RS25255 PF16320 Ribosomal protein L7/L12 dimerisation domain JYK04_RS25260 PF04563 RNA polymerase beta subunit JYK04_RS25260 PF04565 RNA polymerase Rpb2, domain 3 JYK04_RS25260 PF10385 RNA polymerase beta subunit external 1 domain JYK04_RS25260 PF00562 RNA polymerase Rpb2, domain 6 JYK04_RS25260 PF04560 RNA polymerase Rpb2, domain 7 JYK04_RS25260 PF04561 RNA polymerase Rpb2, domain 2 JYK04_RS25265 PF00623 RNA polymerase Rpb1, domain 2 JYK04_RS25265 PF04983 RNA polymerase Rpb1, domain 3 JYK04_RS25265 PF05000 RNA polymerase Rpb1, domain 4 JYK04_RS25265 PF04998 RNA polymerase Rpb1, domain 5 JYK04_RS25265 PF04997 RNA polymerase Rpb1, domain 1 JYK04_RS25275 PF00164 Ribosomal protein S12/S23 JYK04_RS25280 PF00177 Ribosomal protein S7p/S5e JYK04_RS25285 PF00679 Elongation factor G C-terminus JYK04_RS25285 PF03144 Elongation factor Tu domain 2 JYK04_RS25285 PF00009 Elongation factor Tu GTP binding domain JYK04_RS25285 PF03764 Elongation factor G, domain IV JYK04_RS25285 PF14492 Elongation Factor G, domain II JYK04_RS25290 PF00009 Elongation factor Tu GTP binding domain JYK04_RS25290 PF03144 Elongation factor Tu domain 2 JYK04_RS25290 PF03143 Elongation factor Tu C-terminal domain JYK04_RS25295 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JYK04_RS25300 PF00483 Nucleotidyl transferase JYK04_RS25305 PF16363 GDP-mannose 4,6 dehydratase JYK04_RS25310 PF04321 RmlD substrate binding domain JYK04_RS25320 PF00535 Glycosyl transferase family 2 JYK04_RS25340 PF00338 Ribosomal protein S10p/S20e JYK04_RS25345 PF00297 Ribosomal protein L3 JYK04_RS25350 PF00573 Ribosomal protein L4/L1 family JYK04_RS25355 PF00276 Ribosomal protein L23 JYK04_RS25360 PF00181 Ribosomal Proteins L2, RNA binding domain JYK04_RS25360 PF03947 Ribosomal Proteins L2, C-terminal domain JYK04_RS25365 PF00203 Ribosomal protein S19 JYK04_RS25370 PF00237 Ribosomal protein L22p/L17e JYK04_RS25375 PF00189 Ribosomal protein S3, C-terminal domain JYK04_RS25375 PF07650 KH domain JYK04_RS25380 PF00252 Ribosomal protein L16p/L10e JYK04_RS25385 PF00831 Ribosomal L29 protein JYK04_RS25390 PF00366 Ribosomal protein S17 JYK04_RS25395 PF00238 Ribosomal protein L14p/L23e JYK04_RS25400 PF00467 KOW motif JYK04_RS25400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JYK04_RS25405 PF00281 Ribosomal protein L5 JYK04_RS25405 PF00673 ribosomal L5P family C-terminus JYK04_RS25410 PF00253 Ribosomal protein S14p/S29e JYK04_RS25415 PF00410 Ribosomal protein S8 JYK04_RS25420 PF00347 Ribosomal protein L6 JYK04_RS25425 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JYK04_RS25430 PF00333 Ribosomal protein S5, N-terminal domain JYK04_RS25430 PF03719 Ribosomal protein S5, C-terminal domain JYK04_RS25435 PF00327 Ribosomal protein L30p/L7e JYK04_RS25440 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JYK04_RS25445 PF00344 SecY translocase JYK04_RS25450 PF05191 Adenylate kinase, active site lid JYK04_RS25455 PF00557 Metallopeptidase family M24 JYK04_RS25460 PF01176 Translation initiation factor 1A / IF-1 JYK04_RS25465 PF00444 Ribosomal protein L36 JYK04_RS25470 PF00416 Ribosomal protein S13/S18 JYK04_RS25475 PF00411 Ribosomal protein S11 JYK04_RS25480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JYK04_RS25480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JYK04_RS25480 PF01000 RNA polymerase Rpb3/RpoA insert domain JYK04_RS25485 PF01196 Ribosomal protein L17 JYK04_RS25490 PF01416 tRNA pseudouridine synthase JYK04_RS25495 PF00005 ABC transporter JYK04_RS25495 PF12848 ABC transporter JYK04_RS25500 PF09594 Glycosyltransferase family 87 JYK04_RS25505 PF00572 Ribosomal protein L13 JYK04_RS25510 PF00380 Ribosomal protein S9/S16 JYK04_RS25515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYK04_RS25515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYK04_RS25515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYK04_RS25515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYK04_RS25525 PF00485 Phosphoribulokinase / Uridine kinase family JYK04_RS25535 PF01380 SIS domain JYK04_RS25540 PF01648 4'-phosphopantetheinyl transferase superfamily JYK04_RS25545 PF03853 YjeF-related protein N-terminus JYK04_RS25545 PF01256 Carbohydrate kinase JYK04_RS25550 PF00842 Alanine racemase, C-terminal domain JYK04_RS25550 PF01168 Alanine racemase, N-terminal domain JYK04_RS25555 PF00561 alpha/beta hydrolase fold JYK04_RS25560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JYK04_RS25575 PF00814 Glycoprotease family JYK04_RS25585 PF00814 Glycoprotease family JYK04_RS25595 PF18096 THUMP domain-like JYK04_RS25600 PF01522 Polysaccharide deacetylase JYK04_RS25605 PF01522 Polysaccharide deacetylase JYK04_RS25620 PF00293 NUDIX domain JYK04_RS25625 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS25625 PF07702 UTRA domain JYK04_RS25635 PF01098 Cell cycle protein JYK04_RS25640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS25640 PF00672 HAMP domain JYK04_RS25640 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS25645 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS25645 PF00072 Response regulator receiver domain JYK04_RS25655 PF00166 Chaperonin 10 Kd subunit JYK04_RS25660 PF00118 TCP-1/cpn60 chaperonin family JYK04_RS25670 PF00106 short chain dehydrogenase JYK04_RS25680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS25680 PF03466 LysR substrate binding domain JYK04_RS25685 PF02467 Transcription factor WhiB JYK04_RS25690 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS25690 PF00072 Response regulator receiver domain JYK04_RS25695 PF04545 Sigma-70, region 4 JYK04_RS25695 PF04542 Sigma-70 region 2 JYK04_RS25700 PF00571 CBS domain JYK04_RS25700 PF00478 IMP dehydrogenase / GMP reductase domain JYK04_RS25705 PF00478 IMP dehydrogenase / GMP reductase domain JYK04_RS25710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYK04_RS25710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYK04_RS25710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYK04_RS25715 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JYK04_RS25715 PF01266 FAD dependent oxidoreductase JYK04_RS25720 PF00069 Protein kinase domain JYK04_RS25730 PF03793 PASTA domain JYK04_RS25730 PF00069 Protein kinase domain JYK04_RS25735 PF00171 Aldehyde dehydrogenase family JYK04_RS25740 PF05199 GMC oxidoreductase JYK04_RS25755 PF00117 Glutamine amidotransferase class-I JYK04_RS25755 PF02540 NAD synthase JYK04_RS25755 PF00958 GMP synthase C terminal domain JYK04_RS25760 PF00596 Class II Aldolase and Adducin N-terminal domain JYK04_RS25790 PF00072 Response regulator receiver domain JYK04_RS25790 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS25800 PF00877 NlpC/P60 family JYK04_RS25810 PF01022 Bacterial regulatory protein, arsR family JYK04_RS25815 PF00580 UvrD/REP helicase N-terminal domain JYK04_RS25815 PF13361 UvrD-like helicase C-terminal domain JYK04_RS25820 PF01551 Peptidase family M23 JYK04_RS25830 PF01642 Methylmalonyl-CoA mutase JYK04_RS25830 PF02310 B12 binding domain JYK04_RS25845 PF07728 AAA domain (dynein-related subfamily) JYK04_RS25855 PF05762 VWA domain containing CoxE-like protein JYK04_RS25860 PF08442 ATP-grasp domain JYK04_RS25860 PF00549 CoA-ligase JYK04_RS25865 PF02629 CoA binding domain JYK04_RS25865 PF00549 CoA-ligase JYK04_RS25885 PF00551 Formyl transferase JYK04_RS25890 PF02142 MGS-like domain JYK04_RS25890 PF01808 AICARFT/IMPCHase bienzyme JYK04_RS25900 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JYK04_RS25900 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JYK04_RS25910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS25910 PF03466 LysR substrate binding domain JYK04_RS25920 PF00056 lactate/malate dehydrogenase, NAD binding domain JYK04_RS25920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JYK04_RS25940 PF02627 Carboxymuconolactone decarboxylase family JYK04_RS25945 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS25945 PF00155 Aminotransferase class I and II JYK04_RS25960 PF03738 Glutathionylspermidine synthase preATP-grasp JYK04_RS25965 PF00202 Aminotransferase class-III JYK04_RS25970 PF00464 Serine hydroxymethyltransferase JYK04_RS25975 PF00579 tRNA synthetases class I (W and Y) JYK04_RS26000 PF00768 D-alanyl-D-alanine carboxypeptidase JYK04_RS26010 PF00149 Calcineurin-like phosphoesterase JYK04_RS26020 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS26040 PF03795 YCII-related domain JYK04_RS26045 PF04542 Sigma-70 region 2 JYK04_RS26045 PF08281 Sigma-70, region 4 JYK04_RS26060 PF13085 2Fe-2S iron-sulfur cluster binding domain JYK04_RS26065 PF02910 Fumarate reductase flavoprotein C-term JYK04_RS26065 PF00890 FAD binding domain JYK04_RS26075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JYK04_RS26085 PF04545 Sigma-70, region 4 JYK04_RS26085 PF04542 Sigma-70 region 2 JYK04_RS26100 PF02310 B12 binding domain JYK04_RS26100 PF01642 Methylmalonyl-CoA mutase JYK04_RS26105 PF01810 LysE type translocator JYK04_RS26115 PF00535 Glycosyl transferase family 2 JYK04_RS26125 PF08666 SAF domain JYK04_RS26125 PF03102 NeuB family JYK04_RS26135 PF01546 Peptidase family M20/M25/M40 JYK04_RS26135 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK04_RS26140 PF02608 ABC transporter substrate-binding protein PnrA-like JYK04_RS26145 PF00005 ABC transporter JYK04_RS26155 PF02653 Branched-chain amino acid transport system / permease component JYK04_RS26160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYK04_RS26165 PF02885 Glycosyl transferase family, helical bundle domain JYK04_RS26165 PF00591 Glycosyl transferase family, a/b domain JYK04_RS26165 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JYK04_RS26180 PF12680 SnoaL-like domain JYK04_RS26180 PF04542 Sigma-70 region 2 JYK04_RS26180 PF08281 Sigma-70, region 4 JYK04_RS26195 PF07690 Major Facilitator Superfamily JYK04_RS26200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS26200 PF03466 LysR substrate binding domain JYK04_RS26205 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS26220 PF00962 Adenosine/AMP deaminase JYK04_RS26260 PF01791 DeoC/LacD family aldolase JYK04_RS26265 PF00171 Aldehyde dehydrogenase family JYK04_RS26270 PF00171 Aldehyde dehydrogenase family JYK04_RS26295 PF08245 Mur ligase middle domain JYK04_RS26300 PF14102 Capsule biosynthesis CapC JYK04_RS26310 PF08281 Sigma-70, region 4 JYK04_RS26310 PF04542 Sigma-70 region 2 JYK04_RS26315 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS26315 PF00072 Response regulator receiver domain JYK04_RS26320 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS26320 PF00672 HAMP domain JYK04_RS26320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS26330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYK04_RS26330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYK04_RS26330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYK04_RS26330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYK04_RS26335 PF01048 Phosphorylase superfamily JYK04_RS26345 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS26345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK04_RS26350 PF08220 DeoR-like helix-turn-helix domain JYK04_RS26350 PF00455 DeoR C terminal sensor domain JYK04_RS26355 PF00289 Biotin carboxylase, N-terminal domain JYK04_RS26355 PF00364 Biotin-requiring enzyme JYK04_RS26355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK04_RS26355 PF02785 Biotin carboxylase C-terminal domain JYK04_RS26370 PF02545 Maf-like protein JYK04_RS26380 PF01039 Carboxyl transferase domain JYK04_RS26385 PF03099 Biotin/lipoate A/B protein ligase family JYK04_RS26385 PF02237 Biotin protein ligase C terminal domain JYK04_RS26385 PF08279 HTH domain JYK04_RS26390 PF00211 Adenylate and Guanylate cyclase catalytic domain JYK04_RS26395 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS26400 PF00990 Diguanylate cyclase, GGDEF domain JYK04_RS26405 PF00221 Aromatic amino acid lyase JYK04_RS26420 PF03734 L,D-transpeptidase catalytic domain JYK04_RS26420 PF17964 Bacterial Ig domain JYK04_RS26435 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS26435 PF00107 Zinc-binding dehydrogenase JYK04_RS26440 PF01625 Peptide methionine sulfoxide reductase JYK04_RS26450 PF01435 Peptidase family M48 JYK04_RS26460 PF01053 Cys/Met metabolism PLP-dependent enzyme JYK04_RS26480 PF13291 ACT domain JYK04_RS26480 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS26485 PF00005 ABC transporter JYK04_RS26485 PF13732 Domain of unknown function (DUF4162) JYK04_RS26490 PF01061 ABC-2 type transporter JYK04_RS26495 PF01272 Transcription elongation factor, GreA/GreB, C-term JYK04_RS26495 PF03449 Transcription elongation factor, N-terminal JYK04_RS26505 PF02585 GlcNAc-PI de-N-acetylase JYK04_RS26525 PF03190 Protein of unknown function, DUF255 JYK04_RS26540 PF00535 Glycosyl transferase family 2 JYK04_RS26550 PF03006 Haemolysin-III related JYK04_RS26555 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JYK04_RS26555 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JYK04_RS26570 PF05816 Toxic anion resistance protein (TelA) JYK04_RS26585 PF06271 RDD family JYK04_RS26595 PF00155 Aminotransferase class I and II JYK04_RS26625 PF03466 LysR substrate binding domain JYK04_RS26625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS26635 PF02983 Alpha-lytic protease prodomain JYK04_RS26645 PF07969 Amidohydrolase family JYK04_RS26655 PF09339 IclR helix-turn-helix domain JYK04_RS26655 PF01614 Bacterial transcriptional regulator JYK04_RS26665 PF00246 Zinc carboxypeptidase JYK04_RS26670 PF00704 Glycosyl hydrolases family 18 JYK04_RS26670 PF02018 Carbohydrate binding domain JYK04_RS26670 PF00041 Fibronectin type III domain JYK04_RS26685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYK04_RS26700 PF00437 Type II/IV secretion system protein JYK04_RS26715 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS26715 PF00072 Response regulator receiver domain JYK04_RS26735 PF00691 OmpA family JYK04_RS26745 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS26755 PF08361 MAATS-type transcriptional repressor, C-terminal region JYK04_RS26755 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS26760 PF07690 Major Facilitator Superfamily JYK04_RS26770 PF01522 Polysaccharide deacetylase JYK04_RS26785 PF01547 Bacterial extracellular solute-binding protein JYK04_RS26805 PF00248 Aldo/keto reductase family JYK04_RS26810 PF01255 Putative undecaprenyl diphosphate synthase JYK04_RS26815 PF02562 PhoH-like protein JYK04_RS26815 PF13638 PIN domain JYK04_RS26825 PF01594 AI-2E family transporter JYK04_RS26840 PF02627 Carboxymuconolactone decarboxylase family JYK04_RS26845 PF00578 AhpC/TSA family JYK04_RS26850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS26850 PF03466 LysR substrate binding domain JYK04_RS26860 PF00005 ABC transporter JYK04_RS26880 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS26880 PF00912 Transglycosylase JYK04_RS26890 PF04167 Protein of unknown function (DUF402) JYK04_RS26895 PF10415 Fumarase C C-terminus JYK04_RS26895 PF00206 Lyase JYK04_RS26910 PF03009 Glycerophosphoryl diester phosphodiesterase family JYK04_RS26930 PF05681 Fumarate hydratase (Fumerase) JYK04_RS26930 PF05683 Fumarase C-terminus JYK04_RS26945 PF02467 Transcription factor WhiB JYK04_RS26950 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JYK04_RS26960 PF00881 Nitroreductase family JYK04_RS26965 PF02609 Exonuclease VII small subunit JYK04_RS26970 PF13742 OB-fold nucleic acid binding domain JYK04_RS26970 PF02601 Exonuclease VII, large subunit JYK04_RS26980 PF02401 LytB protein JYK04_RS26985 PF00480 ROK family JYK04_RS26995 PF01926 50S ribosome-binding GTPase JYK04_RS26995 PF06071 Protein of unknown function (DUF933) JYK04_RS27085 PF00892 EamA-like transporter family JYK04_RS27095 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS27095 PF00571 CBS domain JYK04_RS27105 PF00155 Aminotransferase class I and II JYK04_RS27105 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS27115 PF00293 NUDIX domain JYK04_RS27135 PF04012 PspA/IM30 family JYK04_RS27140 PF04536 TPM domain JYK04_RS27145 PF13085 2Fe-2S iron-sulfur cluster binding domain JYK04_RS27145 PF13183 4Fe-4S dicluster domain JYK04_RS27150 PF00890 FAD binding domain JYK04_RS27150 PF02910 Fumarate reductase flavoprotein C-term JYK04_RS27170 PF14492 Elongation Factor G, domain II JYK04_RS27170 PF03144 Elongation factor Tu domain 2 JYK04_RS27170 PF00679 Elongation factor G C-terminus JYK04_RS27170 PF00009 Elongation factor Tu GTP binding domain JYK04_RS27175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS27180 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS27185 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS27185 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK04_RS27190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS27190 PF00005 ABC transporter JYK04_RS27195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS27195 PF00005 ABC transporter JYK04_RS27205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS27210 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS27215 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS27215 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK04_RS27220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS27220 PF00005 ABC transporter JYK04_RS27225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS27225 PF00005 ABC transporter JYK04_RS27235 PF02585 GlcNAc-PI de-N-acetylase JYK04_RS27250 PF00005 ABC transporter JYK04_RS27260 PF07730 Histidine kinase JYK04_RS27260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS27265 PF00072 Response regulator receiver domain JYK04_RS27265 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS27280 PF00037 4Fe-4S binding domain JYK04_RS27285 PF00155 Aminotransferase class I and II JYK04_RS27300 PF07687 Peptidase dimerisation domain JYK04_RS27300 PF01546 Peptidase family M20/M25/M40 JYK04_RS27305 PF03641 Possible lysine decarboxylase JYK04_RS27310 PF00809 Pterin binding enzyme JYK04_RS27320 PF00117 Glutamine amidotransferase class-I JYK04_RS27320 PF13673 Acetyltransferase (GNAT) domain JYK04_RS27320 PF00958 GMP synthase C terminal domain JYK04_RS27320 PF13302 Acetyltransferase (GNAT) domain JYK04_RS27320 PF03352 Methyladenine glycosylase JYK04_RS27325 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS27340 PF01596 O-methyltransferase JYK04_RS27345 PF08281 Sigma-70, region 4 JYK04_RS27345 PF04542 Sigma-70 region 2 JYK04_RS27355 PF13180 PDZ domain JYK04_RS27360 PF02416 mttA/Hcf106 family JYK04_RS27370 PF01883 Iron-sulfur cluster assembly protein JYK04_RS27370 PF10609 NUBPL iron-transfer P-loop NTPase JYK04_RS27395 PF01544 CorA-like Mg2+ transporter protein JYK04_RS27415 PF01914 MarC family integral membrane protein JYK04_RS27425 PF00561 alpha/beta hydrolase fold JYK04_RS27430 PF00270 DEAD/DEAH box helicase JYK04_RS27430 PF00271 Helicase conserved C-terminal domain JYK04_RS27470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS27475 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS27480 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS27485 PF00005 ABC transporter JYK04_RS27485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS27510 PF00581 Rhodanese-like domain JYK04_RS27510 PF00899 ThiF family JYK04_RS27515 PF00561 alpha/beta hydrolase fold JYK04_RS27535 PF13361 UvrD-like helicase C-terminal domain JYK04_RS27535 PF13361 UvrD-like helicase C-terminal domain JYK04_RS27535 PF00580 UvrD/REP helicase N-terminal domain JYK04_RS27535 PF00580 UvrD/REP helicase N-terminal domain JYK04_RS27540 PF00580 UvrD/REP helicase N-terminal domain JYK04_RS27540 PF13361 UvrD-like helicase C-terminal domain JYK04_RS27545 PF07687 Peptidase dimerisation domain JYK04_RS27545 PF01546 Peptidase family M20/M25/M40 JYK04_RS27550 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JYK04_RS27550 PF09297 NADH pyrophosphatase zinc ribbon domain JYK04_RS27550 PF00293 NUDIX domain JYK04_RS27555 PF00462 Glutaredoxin JYK04_RS27560 PF13361 UvrD-like helicase C-terminal domain JYK04_RS27560 PF00580 UvrD/REP helicase N-terminal domain JYK04_RS27560 PF00570 HRDC domain JYK04_RS27570 PF02467 Transcription factor WhiB JYK04_RS27580 PF02195 ParB-like nuclease domain JYK04_RS27580 PF17762 HTH domain found in ParB protein JYK04_RS27605 PF03109 ABC1 family JYK04_RS27650 PF02391 MoaE protein JYK04_RS27660 PF13180 PDZ domain JYK04_RS27660 PF05362 Lon protease (S16) C-terminal proteolytic domain JYK04_RS27670 PF03699 Uncharacterised protein family (UPF0182) JYK04_RS27685 PF01494 FAD binding domain JYK04_RS27705 PF06628 Catalase-related immune-responsive JYK04_RS27705 PF00199 Catalase JYK04_RS27715 PF00459 Inositol monophosphatase family JYK04_RS27725 PF00893 Small Multidrug Resistance protein JYK04_RS27730 PF03193 RsgA GTPase JYK04_RS27735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYK04_RS27745 PF02586 SOS response associated peptidase (SRAP) JYK04_RS27755 PF08281 Sigma-70, region 4 JYK04_RS27755 PF04542 Sigma-70 region 2 JYK04_RS27760 PF13490 Putative zinc-finger JYK04_RS27765 PF01966 HD domain JYK04_RS27785 PF01327 Polypeptide deformylase JYK04_RS27790 PF01965 DJ-1/PfpI family JYK04_RS27800 PF00268 Ribonucleotide reductase, small chain JYK04_RS27805 PF00317 Ribonucleotide reductase, all-alpha domain JYK04_RS27805 PF02867 Ribonucleotide reductase, barrel domain JYK04_RS27805 PF03477 ATP cone domain JYK04_RS27820 PF02554 Carbon starvation protein CstA JYK04_RS27820 PF13722 5TM C-terminal transporter carbon starvation CstA JYK04_RS27825 PF07702 UTRA domain JYK04_RS27825 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS27830 PF01547 Bacterial extracellular solute-binding protein JYK04_RS27835 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS27840 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS27845 PF00933 Glycosyl hydrolase family 3 N terminal domain JYK04_RS27845 PF01915 Glycosyl hydrolase family 3 C-terminal domain JYK04_RS27850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JYK04_RS27865 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS27870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS27870 PF07568 Histidine kinase JYK04_RS27870 PF12282 Signal transduction histidine kinase JYK04_RS27875 PF02467 Transcription factor WhiB JYK04_RS27880 PF00781 Diacylglycerol kinase catalytic domain JYK04_RS27890 PF04542 Sigma-70 region 2 JYK04_RS27890 PF04545 Sigma-70, region 4 JYK04_RS27890 PF04539 Sigma-70 region 3 JYK04_RS27895 PF13581 Histidine kinase-like ATPase domain JYK04_RS27905 PF00999 Sodium/hydrogen exchanger family JYK04_RS27910 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS27925 PF00175 Oxidoreductase NAD-binding domain JYK04_RS27925 PF00042 Globin JYK04_RS27925 PF00970 Oxidoreductase FAD-binding domain JYK04_RS27930 PF02082 Transcriptional regulator JYK04_RS27940 PF00348 Polyprenyl synthetase JYK04_RS27960 PF02031 Streptomyces extracellular neutral proteinase (M7) family JYK04_RS27965 PF03466 LysR substrate binding domain JYK04_RS27965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS27970 PF08281 Sigma-70, region 4 JYK04_RS27970 PF04542 Sigma-70 region 2 JYK04_RS28005 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS28005 PF00107 Zinc-binding dehydrogenase JYK04_RS28010 PF00390 Malic enzyme, N-terminal domain JYK04_RS28010 PF03949 Malic enzyme, NAD binding domain JYK04_RS28015 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK04_RS28020 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS28025 PF00005 ABC transporter JYK04_RS28095 PF09055 Nickel-containing superoxide dismutase JYK04_RS28175 PF02779 Transketolase, pyrimidine binding domain JYK04_RS28175 PF16870 2-oxoglutarate dehydrogenase C-terminal JYK04_RS28175 PF00676 Dehydrogenase E1 component JYK04_RS28175 PF16078 2-oxoglutarate dehydrogenase N-terminus JYK04_RS28175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYK04_RS28180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS28180 PF00672 HAMP domain JYK04_RS28180 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS28185 PF00072 Response regulator receiver domain JYK04_RS28185 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS28190 PF00933 Glycosyl hydrolase family 3 N terminal domain JYK04_RS28200 PF00665 Integrase core domain JYK04_RS28215 PF00581 Rhodanese-like domain JYK04_RS28225 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS28225 PF05362 Lon protease (S16) C-terminal proteolytic domain JYK04_RS28225 PF02190 ATP-dependent protease La (LON) substrate-binding domain JYK04_RS28240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS28240 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS28240 PF00989 PAS fold JYK04_RS28240 PF13426 PAS domain JYK04_RS28240 PF13188 PAS domain JYK04_RS28265 PF08239 Bacterial SH3 domain JYK04_RS28265 PF01476 LysM domain JYK04_RS28265 PF00877 NlpC/P60 family JYK04_RS28280 PF08281 Sigma-70, region 4 JYK04_RS28280 PF04542 Sigma-70 region 2 JYK04_RS28305 PF01098 Cell cycle protein JYK04_RS28310 PF00905 Penicillin binding protein transpeptidase domain JYK04_RS28320 PF11583 P-aminobenzoate N-oxygenase AurF JYK04_RS28325 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS28335 PF00672 HAMP domain JYK04_RS28335 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS28335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS28355 PF02735 Ku70/Ku80 beta-barrel domain JYK04_RS28360 PF04679 ATP dependent DNA ligase C terminal region JYK04_RS28360 PF01068 ATP dependent DNA ligase domain JYK04_RS28360 PF13298 DNA polymerase Ligase (LigD) JYK04_RS28365 PF04679 ATP dependent DNA ligase C terminal region JYK04_RS28365 PF13298 DNA polymerase Ligase (LigD) JYK04_RS28365 PF01068 ATP dependent DNA ligase domain JYK04_RS28390 PF02625 XdhC and CoxI family JYK04_RS28390 PF13478 XdhC Rossmann domain JYK04_RS28415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYK04_RS28415 PF01872 RibD C-terminal domain JYK04_RS28420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYK04_RS28420 PF01872 RibD C-terminal domain JYK04_RS28440 PF00990 Diguanylate cyclase, GGDEF domain JYK04_RS28480 PF00145 C-5 cytosine-specific DNA methylase JYK04_RS28485 PF00772 DnaB-like helicase N terminal domain JYK04_RS28485 PF03796 DnaB-like helicase C terminal domain JYK04_RS28485 PF14528 LAGLIDADG-like domain JYK04_RS28510 PF00072 Response regulator receiver domain JYK04_RS28510 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS28515 PF05746 DALR anticodon binding domain JYK04_RS28515 PF03485 Arginyl tRNA synthetase N terminal domain JYK04_RS28515 PF00750 tRNA synthetases class I (R) JYK04_RS28520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JYK04_RS28520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JYK04_RS28525 PF01842 ACT domain JYK04_RS28525 PF00742 Homoserine dehydrogenase JYK04_RS28525 PF03447 Homoserine dehydrogenase, NAD binding domain JYK04_RS28530 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS28535 PF08544 GHMP kinases C terminal JYK04_RS28535 PF00288 GHMP kinases N terminal domain JYK04_RS28540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYK04_RS28540 PF07497 Rho termination factor, RNA-binding domain JYK04_RS28540 PF07498 Rho termination factor, N-terminal domain JYK04_RS28545 PF03816 Cell envelope-related transcriptional attenuator domain JYK04_RS28550 PF01197 Ribosomal protein L31 JYK04_RS28555 PF03462 PCRF domain JYK04_RS28555 PF00472 RF-1 domain JYK04_RS28560 PF13649 Methyltransferase domain JYK04_RS28560 PF17827 PrmC N-terminal domain JYK04_RS28565 PF01300 Telomere recombination JYK04_RS28570 PF01451 Low molecular weight phosphotyrosine protein phosphatase JYK04_RS28575 PF00464 Serine hydroxymethyltransferase JYK04_RS28580 PF00953 Glycosyl transferase family 4 JYK04_RS28590 PF00119 ATP synthase A chain JYK04_RS28595 PF00137 ATP synthase subunit C JYK04_RS28600 PF00430 ATP synthase B/B' CF(0) JYK04_RS28605 PF00213 ATP synthase delta (OSCP) subunit JYK04_RS28610 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYK04_RS28610 PF00306 ATP synthase alpha/beta chain, C terminal domain JYK04_RS28610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYK04_RS28615 PF00231 ATP synthase JYK04_RS28620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYK04_RS28620 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYK04_RS28625 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JYK04_RS28635 PF00041 Fibronectin type III domain JYK04_RS28635 PF00553 Cellulose binding domain JYK04_RS28635 PF00704 Glycosyl hydrolases family 18 JYK04_RS28640 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS28640 PF00072 Response regulator receiver domain JYK04_RS28655 PF01923 Cobalamin adenosyltransferase JYK04_RS28660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK04_RS28660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK04_RS28675 PF01939 Endonuclease NucS JYK04_RS28685 PF00296 Luciferase-like monooxygenase JYK04_RS28700 PF00005 ABC transporter JYK04_RS28710 PF00005 ABC transporter JYK04_RS28730 PF00108 Thiolase, N-terminal domain JYK04_RS28730 PF02803 Thiolase, C-terminal domain JYK04_RS28770 PF01910 Thiamine-binding protein JYK04_RS28800 PF00553 Cellulose binding domain JYK04_RS28800 PF01341 Glycosyl hydrolases family 6 JYK04_RS28820 PF12823 Domain of unknown function (DUF3817) JYK04_RS28825 PF02310 B12 binding domain JYK04_RS28825 PF01642 Methylmalonyl-CoA mutase JYK04_RS28835 PF16859 Tetracyclin repressor-like, C-terminal domain JYK04_RS28835 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS28840 PF00085 Thioredoxin JYK04_RS28870 PF02887 Pyruvate kinase, alpha/beta domain JYK04_RS28870 PF00224 Pyruvate kinase, barrel domain JYK04_RS28875 PF00871 Acetokinase family JYK04_RS28880 PF01515 Phosphate acetyl/butaryl transferase JYK04_RS28880 PF07085 DRTGG domain JYK04_RS28885 PF00365 Phosphofructokinase JYK04_RS28900 PF00085 Thioredoxin JYK04_RS28905 PF00128 Alpha amylase, catalytic domain JYK04_RS28905 PF02806 Alpha amylase, C-terminal all-beta domain JYK04_RS28905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK04_RS28910 PF18085 Maltokinase N-terminal cap domain JYK04_RS28915 PF00128 Alpha amylase, catalytic domain JYK04_RS28915 PF16657 Maltogenic Amylase, C-terminal domain JYK04_RS28920 PF11896 Domain of unknown function (DUF3416) JYK04_RS28935 PF11897 Protein of unknown function (DUF3417) JYK04_RS28935 PF00343 Carbohydrate phosphorylase JYK04_RS28945 PF07690 Major Facilitator Superfamily JYK04_RS28955 PF07504 Fungalysin/Thermolysin Propeptide Motif JYK04_RS28955 PF01483 Proprotein convertase P-domain JYK04_RS28955 PF01447 Thermolysin metallopeptidase, catalytic domain JYK04_RS28955 PF02868 Thermolysin metallopeptidase, alpha-helical domain JYK04_RS28960 PF02397 Bacterial sugar transferase JYK04_RS28965 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS28970 PF16363 GDP-mannose 4,6 dehydratase JYK04_RS29010 PF13614 AAA domain JYK04_RS29015 PF00534 Glycosyl transferases group 1 JYK04_RS29015 PF13579 Glycosyl transferase 4-like domain JYK04_RS29030 PF07690 Major Facilitator Superfamily JYK04_RS29040 PF00128 Alpha amylase, catalytic domain JYK04_RS29040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK04_RS29045 PF17964 Bacterial Ig domain JYK04_RS29045 PF03734 L,D-transpeptidase catalytic domain JYK04_RS29060 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS29080 PF00067 Cytochrome P450 JYK04_RS29085 PF16715 Cyclodipeptide synthase JYK04_RS29100 PF03358 NADPH-dependent FMN reductase JYK04_RS29100 PF01566 Natural resistance-associated macrophage protein JYK04_RS29115 PF03313 Serine dehydratase alpha chain JYK04_RS29115 PF03315 Serine dehydratase beta chain JYK04_RS29120 PF00464 Serine hydroxymethyltransferase JYK04_RS29125 PF01597 Glycine cleavage H-protein JYK04_RS29130 PF08669 Glycine cleavage T-protein C-terminal barrel domain JYK04_RS29130 PF01571 Aminomethyltransferase folate-binding domain JYK04_RS29150 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK04_RS29150 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS29155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS29160 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS29165 PF00005 ABC transporter JYK04_RS29165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS29170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS29170 PF00005 ABC transporter JYK04_RS29175 PF03458 UPF0126 domain JYK04_RS29185 PF00266 Aminotransferase class-V JYK04_RS29215 PF00107 Zinc-binding dehydrogenase JYK04_RS29215 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS29220 PF01965 DJ-1/PfpI family JYK04_RS29235 PF00106 short chain dehydrogenase JYK04_RS29245 PF01653 NAD-dependent DNA ligase adenylation domain JYK04_RS29245 PF03120 NAD-dependent DNA ligase OB-fold domain JYK04_RS29245 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JYK04_RS29245 PF12826 Helix-hairpin-helix motif JYK04_RS29245 PF00533 BRCA1 C Terminus (BRCT) domain JYK04_RS29250 PF00990 Diguanylate cyclase, GGDEF domain JYK04_RS29250 PF00563 EAL domain JYK04_RS29250 PF03707 Bacterial signalling protein N terminal repeat JYK04_RS29255 PF02686 Glu-tRNAGln amidotransferase C subunit JYK04_RS29260 PF01425 Amidase JYK04_RS29270 PF02637 GatB domain JYK04_RS29270 PF02934 GatB/GatE catalytic domain JYK04_RS29280 PF00069 Protein kinase domain JYK04_RS29280 PF03793 PASTA domain JYK04_RS29290 PF01804 Penicillin amidase JYK04_RS29295 PF00664 ABC transporter transmembrane region JYK04_RS29295 PF00005 ABC transporter JYK04_RS29295 PF04954 Siderophore-interacting protein JYK04_RS29295 PF08021 Siderophore-interacting FAD-binding domain JYK04_RS29305 PF04978 Protein of unknown function (DUF664) JYK04_RS29320 PF03176 MMPL family JYK04_RS29325 PF13302 Acetyltransferase (GNAT) domain JYK04_RS29340 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS29340 PF00072 Response regulator receiver domain JYK04_RS29350 PF07995 Glucose / Sorbosone dehydrogenase JYK04_RS29355 PF00248 Aldo/keto reductase family JYK04_RS29360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK04_RS29365 PF00563 EAL domain JYK04_RS29365 PF03707 Bacterial signalling protein N terminal repeat JYK04_RS29365 PF00990 Diguanylate cyclase, GGDEF domain JYK04_RS29370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK04_RS29370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK04_RS29370 PF00205 Thiamine pyrophosphate enzyme, central domain JYK04_RS29375 PF10369 Small subunit of acetolactate synthase JYK04_RS29380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JYK04_RS29380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JYK04_RS29385 PF01842 ACT domain JYK04_RS29385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK04_RS29385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK04_RS29400 PF07690 Major Facilitator Superfamily JYK04_RS29410 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS29415 PF01619 Proline dehydrogenase JYK04_RS29420 PF00171 Aldehyde dehydrogenase family JYK04_RS29435 PF00881 Nitroreductase family JYK04_RS29435 PF01996 F420-0:Gamma-glutamyl ligase JYK04_RS29445 PF05506 Domain of unknown function (DUF756) JYK04_RS29445 PF04185 Phosphoesterase family JYK04_RS29455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS29455 PF03466 LysR substrate binding domain JYK04_RS29460 PF00180 Isocitrate/isopropylmalate dehydrogenase JYK04_RS29465 PF01063 Amino-transferase class IV JYK04_RS29470 PF02683 Cytochrome C biogenesis protein transmembrane region JYK04_RS29480 PF00699 Urease beta subunit JYK04_RS29480 PF00547 Urease, gamma subunit JYK04_RS29485 PF01979 Amidohydrolase family JYK04_RS29485 PF00449 Urease alpha-subunit, N-terminal domain JYK04_RS29490 PF04371 Porphyromonas-type peptidyl-arginine deiminase JYK04_RS29500 PF00665 Integrase core domain JYK04_RS29510 PF08502 LeuA allosteric (dimerisation) domain JYK04_RS29510 PF00682 HMGL-like JYK04_RS29520 PF04264 YceI-like domain JYK04_RS29525 PF01039 Carboxyl transferase domain JYK04_RS29545 PF03259 Roadblock/LC7 domain JYK04_RS29565 PF03259 Roadblock/LC7 domain JYK04_RS29570 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS29570 PF00672 HAMP domain JYK04_RS29570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS29570 PF00989 PAS fold JYK04_RS29580 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYK04_RS29585 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYK04_RS29590 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS29625 PF00330 Aconitase family (aconitate hydratase) JYK04_RS29630 PF00694 Aconitase C-terminal domain JYK04_RS29640 PF00216 Bacterial DNA-binding protein JYK04_RS29645 PF01983 Guanylyl transferase CofC like JYK04_RS29655 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JYK04_RS29655 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JYK04_RS29660 PF01820 D-ala D-ala ligase N-terminus JYK04_RS29660 PF07478 D-ala D-ala ligase C-terminus JYK04_RS29675 PF00586 AIR synthase related protein, N-terminal domain JYK04_RS29675 PF02769 AIR synthase related protein, C-terminal domain JYK04_RS29680 PF08543 Phosphomethylpyrimidine kinase JYK04_RS29685 PF00830 Ribosomal L28 family JYK04_RS29690 PF13684 Dihydroxyacetone kinase family JYK04_RS29690 PF02734 DAK2 domain JYK04_RS29695 PF17191 RecG wedge domain JYK04_RS29695 PF00270 DEAD/DEAH box helicase JYK04_RS29695 PF00271 Helicase conserved C-terminal domain JYK04_RS29705 PF01467 Cytidylyltransferase-like JYK04_RS29715 PF02620 Large ribosomal RNA subunit accumulation protein YceD JYK04_RS29720 PF01783 Ribosomal L32p protein family JYK04_RS29725 PF14622 Ribonuclease-III-like JYK04_RS29725 PF00035 Double-stranded RNA binding motif JYK04_RS29730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYK04_RS29730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JYK04_RS29735 PF01638 HxlR-like helix-turn-helix JYK04_RS29750 PF00708 Acylphosphatase JYK04_RS29760 PF02463 RecF/RecN/SMC N terminal domain JYK04_RS29760 PF06470 SMC proteins Flexible Hinge Domain JYK04_RS29765 PF00083 Sugar (and other) transporter JYK04_RS29780 PF02881 SRP54-type protein, helical bundle domain JYK04_RS29780 PF00448 SRP54-type protein, GTPase domain JYK04_RS29795 PF00909 Ammonium Transporter Family JYK04_RS29800 PF00543 Nitrogen regulatory protein P-II JYK04_RS29805 PF01966 HD domain JYK04_RS29805 PF08335 GlnD PII-uridylyltransferase JYK04_RS29805 PF01909 Nucleotidyltransferase domain JYK04_RS29810 PF02881 SRP54-type protein, helical bundle domain JYK04_RS29810 PF00448 SRP54-type protein, GTPase domain JYK04_RS29810 PF02978 Signal peptide binding domain JYK04_RS29815 PF01434 Peptidase family M41 JYK04_RS29815 PF00004 ATPase family associated with various cellular activities (AAA) JYK04_RS29815 PF17862 AAA+ lid domain JYK04_RS29825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK04_RS29825 PF03129 Anticodon binding domain JYK04_RS29835 PF00886 Ribosomal protein S16 JYK04_RS29845 PF05239 PRC-barrel domain JYK04_RS29845 PF01782 RimM N-terminal domain JYK04_RS29850 PF01746 tRNA (Guanine-1)-methyltransferase JYK04_RS29855 PF01245 Ribosomal protein L19 JYK04_RS29860 PF10502 Signal peptidase, peptidase S26 JYK04_RS29865 PF10502 Signal peptidase, peptidase S26 JYK04_RS29870 PF10502 Signal peptidase, peptidase S26 JYK04_RS29875 PF10502 Signal peptidase, peptidase S26 JYK04_RS29880 PF00293 NUDIX domain JYK04_RS29885 PF10611 Protein of unknown function (DUF2469) JYK04_RS29890 PF02021 Uncharacterised protein family UPF0102 JYK04_RS29895 PF01078 Magnesium chelatase, subunit ChlI JYK04_RS29895 PF13335 Magnesium chelatase, subunit ChlI C-terminal JYK04_RS29995 PF00580 UvrD/REP helicase N-terminal domain JYK04_RS29995 PF12705 PD-(D/E)XK nuclease superfamily JYK04_RS29995 PF13361 UvrD-like helicase C-terminal domain JYK04_RS30000 PF02463 RecF/RecN/SMC N terminal domain JYK04_RS30055 PF17645 Arylmalonate decarboxylase JYK04_RS30120 PF17782 DprA winged helix domain JYK04_RS30120 PF02481 DNA recombination-mediator protein A JYK04_RS30125 PF04539 Sigma-70 region 3 JYK04_RS30125 PF04545 Sigma-70, region 4 JYK04_RS30125 PF04542 Sigma-70 region 2 JYK04_RS30135 PF01551 Peptidase family M23 JYK04_RS30140 PF00318 Ribosomal protein S2 JYK04_RS30145 PF00889 Elongation factor TS JYK04_RS30150 PF00696 Amino acid kinase family JYK04_RS30155 PF01765 Ribosome recycling factor JYK04_RS30165 PF04055 Radical SAM superfamily JYK04_RS30175 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS30180 PF00005 ABC transporter JYK04_RS30180 PF08402 TOBE domain JYK04_RS30185 PF00067 Cytochrome P450 JYK04_RS30190 PF14759 Reductase C-terminal JYK04_RS30190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS30220 PF00005 ABC transporter JYK04_RS30225 PF00202 Aminotransferase class-III JYK04_RS30235 PF00171 Aldehyde dehydrogenase family JYK04_RS30250 PF00144 Beta-lactamase JYK04_RS30255 PF00072 Response regulator receiver domain JYK04_RS30255 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS30260 PF07730 Histidine kinase JYK04_RS30265 PF03009 Glycerophosphoryl diester phosphodiesterase family JYK04_RS30270 PF00962 Adenosine/AMP deaminase JYK04_RS30290 PF00171 Aldehyde dehydrogenase family JYK04_RS30295 PF13416 Bacterial extracellular solute-binding protein JYK04_RS30300 PF00005 ABC transporter JYK04_RS30300 PF08402 TOBE domain JYK04_RS30305 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS30310 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS30315 PF01266 FAD dependent oxidoreductase JYK04_RS30325 PF00704 Glycosyl hydrolases family 18 JYK04_RS30325 PF02018 Carbohydrate binding domain JYK04_RS30325 PF00041 Fibronectin type III domain JYK04_RS30335 PF00202 Aminotransferase class-III JYK04_RS30345 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS30345 PF07905 Purine catabolism regulatory protein-like family JYK04_RS30345 PF17853 GGDEF-like domain JYK04_RS30350 PF00171 Aldehyde dehydrogenase family JYK04_RS30355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS30355 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS30355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS30365 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JYK04_RS30365 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JYK04_RS30365 PF13288 DXP reductoisomerase C-terminal domain JYK04_RS30370 PF02163 Peptidase family M50 JYK04_RS30370 PF17820 PDZ domain JYK04_RS30375 PF04551 GcpE protein JYK04_RS30390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK04_RS30390 PF04073 Aminoacyl-tRNA editing domain JYK04_RS30390 PF03129 Anticodon binding domain JYK04_RS30395 PF01145 SPFH domain / Band 7 family JYK04_RS30415 PF17384 RimP C-terminal SH3 domain JYK04_RS30415 PF02576 RimP N-terminal domain JYK04_RS30420 PF13184 NusA-like KH domain JYK04_RS30420 PF08529 NusA N-terminal domain JYK04_RS30430 PF00009 Elongation factor Tu GTP binding domain JYK04_RS30430 PF11987 Translation-initiation factor 2 JYK04_RS30430 PF04760 Translation initiation factor IF-2, N-terminal region JYK04_RS30440 PF02033 Ribosome-binding factor A JYK04_RS30445 PF01509 TruB family pseudouridylate synthase (N terminal domain) JYK04_RS30445 PF09142 tRNA Pseudouridine synthase II, C terminal JYK04_RS30445 PF16198 tRNA pseudouridylate synthase B C-terminal domain JYK04_RS30455 PF06574 FAD synthetase JYK04_RS30455 PF01687 Riboflavin kinase JYK04_RS30460 PF10609 NUBPL iron-transfer P-loop NTPase JYK04_RS30475 PF05108 Type VII secretion system ESX-1, transport TM domain B JYK04_RS30480 PF00082 Subtilase family JYK04_RS30480 PF17936 Bacterial Ig domain JYK04_RS30500 PF01580 FtsK/SpoIIIE family JYK04_RS30510 PF00312 Ribosomal protein S15 JYK04_RS30515 PF00013 KH domain JYK04_RS30515 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JYK04_RS30515 PF01138 3' exoribonuclease family, domain 1 JYK04_RS30515 PF03725 3' exoribonuclease family, domain 2 JYK04_RS30515 PF00575 S1 RNA binding domain JYK04_RS30520 PF05193 Peptidase M16 inactive domain JYK04_RS30520 PF00675 Insulinase (Peptidase family M16) JYK04_RS30525 PF01113 Dihydrodipicolinate reductase, N-terminus JYK04_RS30525 PF05173 Dihydrodipicolinate reductase, C-terminus JYK04_RS30545 PF02511 Thymidylate synthase complementing protein JYK04_RS30550 PF00701 Dihydrodipicolinate synthetase family JYK04_RS30555 PF17770 Ribonuclease J C-terminal domain JYK04_RS30555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JYK04_RS30555 PF12706 Beta-lactamase superfamily domain JYK04_RS30585 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS30585 PF00672 HAMP domain JYK04_RS30590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS30590 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS30590 PF00672 HAMP domain JYK04_RS30590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JYK04_RS30590 PF00072 Response regulator receiver domain JYK04_RS30590 PF01627 Hpt domain JYK04_RS30595 PF00072 Response regulator receiver domain JYK04_RS30600 PF09397 Ftsk gamma domain JYK04_RS30600 PF01580 FtsK/SpoIIIE family JYK04_RS30600 PF17854 FtsK alpha domain JYK04_RS30610 PF00919 Uncharacterized protein family UPF0004 JYK04_RS30610 PF18693 TRAM domain JYK04_RS30610 PF04055 Radical SAM superfamily JYK04_RS30615 PF01066 CDP-alcohol phosphatidyltransferase JYK04_RS30620 PF00994 Probable molybdopterin binding domain JYK04_RS30620 PF18146 Damage-inducible protein CinA KH domain JYK04_RS30620 PF02464 Competence-damaged protein JYK04_RS30635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JYK04_RS30635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYK04_RS30645 PF08494 DEAD/H associated JYK04_RS30645 PF00271 Helicase conserved C-terminal domain JYK04_RS30645 PF00270 DEAD/DEAH box helicase JYK04_RS30650 PF12833 Helix-turn-helix domain JYK04_RS30650 PF02311 AraC-like ligand binding domain JYK04_RS30680 PF02861 Clp amino terminal domain, pathogenicity island component JYK04_RS30685 PF01209 ubiE/COQ5 methyltransferase family JYK04_RS30705 PF00154 recA bacterial DNA recombination protein JYK04_RS30710 PF02631 RecX family JYK04_RS30730 PF01494 FAD binding domain JYK04_RS30735 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS30740 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS30745 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK04_RS30750 PF00005 ABC transporter JYK04_RS30755 PF00072 Response regulator receiver domain JYK04_RS30755 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS30760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS30760 PF00672 HAMP domain JYK04_RS30760 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS30780 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS30785 PF00480 ROK family JYK04_RS30795 PF03466 LysR substrate binding domain JYK04_RS30795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS30805 PF00919 Uncharacterized protein family UPF0004 JYK04_RS30805 PF04055 Radical SAM superfamily JYK04_RS30835 PF01678 Diaminopimelate epimerase JYK04_RS30840 PF02824 TGS domain JYK04_RS30840 PF04607 Region found in RelA / SpoT proteins JYK04_RS30840 PF13291 ACT domain JYK04_RS30850 PF13167 GTP-binding GTPase N-terminal JYK04_RS30850 PF16360 GTP-binding GTPase Middle Region JYK04_RS30850 PF01926 50S ribosome-binding GTPase JYK04_RS30860 PF00202 Aminotransferase class-III JYK04_RS30865 PF06276 Ferric iron reductase FhuF-like transporter JYK04_RS30865 PF04183 IucA / IucC family JYK04_RS30875 PF06276 Ferric iron reductase FhuF-like transporter JYK04_RS30875 PF04183 IucA / IucC family JYK04_RS30880 PF13307 Helicase C-terminal domain JYK04_RS30885 PF01726 LexA DNA binding domain JYK04_RS30885 PF00717 Peptidase S24-like JYK04_RS30890 PF03477 ATP cone domain JYK04_RS30895 PF08471 Class II vitamin B12-dependent ribonucleotide reductase JYK04_RS30895 PF02867 Ribonucleotide reductase, barrel domain JYK04_RS30900 PF09278 MerR, DNA binding JYK04_RS30900 PF00376 MerR family regulatory protein JYK04_RS30940 PF07690 Major Facilitator Superfamily JYK04_RS30945 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS30945 PF16859 Tetracyclin repressor-like, C-terminal domain JYK04_RS30950 PF01351 Ribonuclease HII JYK04_RS30965 PF00270 DEAD/DEAH box helicase JYK04_RS30965 PF00271 Helicase conserved C-terminal domain JYK04_RS30965 PF09382 RQC domain JYK04_RS30965 PF16124 RecQ zinc-binding JYK04_RS30965 PF00570 HRDC domain JYK04_RS30985 PF00005 ABC transporter JYK04_RS30990 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS30990 PF07729 FCD domain JYK04_RS30995 PF04545 Sigma-70, region 4 JYK04_RS30995 PF04539 Sigma-70 region 3 JYK04_RS30995 PF04542 Sigma-70 region 2 JYK04_RS30995 PF00140 Sigma-70 factor, region 1.2 JYK04_RS31010 PF00204 DNA gyrase B JYK04_RS31010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS31010 PF01751 Toprim domain JYK04_RS31010 PF00986 DNA gyrase B subunit, carboxyl terminus JYK04_RS31020 PF00474 Sodium:solute symporter family JYK04_RS31025 PF00072 Response regulator receiver domain JYK04_RS31030 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JYK04_RS31030 PF17203 Single cache domain 3 JYK04_RS31030 PF00989 PAS fold JYK04_RS31030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS31050 PF00931 NB-ARC domain JYK04_RS31050 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS31050 PF03704 Bacterial transcriptional activator domain JYK04_RS31055 PF00285 Citrate synthase, C-terminal domain JYK04_RS31060 PF00285 Citrate synthase, C-terminal domain JYK04_RS31065 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYK04_RS31065 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYK04_RS31070 PF02342 TerD domain JYK04_RS31075 PF00521 DNA gyrase/topoisomerase IV, subunit A JYK04_RS31075 PF03989 DNA gyrase C-terminal domain, beta-propeller JYK04_RS31080 PF05193 Peptidase M16 inactive domain JYK04_RS31080 PF00675 Insulinase (Peptidase family M16) JYK04_RS31090 PF01551 Peptidase family M23 JYK04_RS31095 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS31095 PF07729 FCD domain JYK04_RS31100 PF00381 PTS HPr component phosphorylation site JYK04_RS31105 PF00583 Acetyltransferase (GNAT) family JYK04_RS31105 PF13380 CoA binding domain JYK04_RS31105 PF13607 Succinyl-CoA ligase like flavodoxin domain JYK04_RS31120 PF00265 Thymidine kinase JYK04_RS31135 PF08245 Mur ligase middle domain JYK04_RS31135 PF02875 Mur ligase family, glutamate ligase domain JYK04_RS31135 PF01225 Mur ligase family, catalytic domain JYK04_RS31155 PF01965 DJ-1/PfpI family JYK04_RS31160 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS31175 PF00005 ABC transporter JYK04_RS31180 PF01032 FecCD transport family JYK04_RS31185 PF01497 Periplasmic binding protein JYK04_RS31200 PF00581 Rhodanese-like domain JYK04_RS31205 PF11268 Protein of unknown function (DUF3071) JYK04_RS31215 PF04030 D-arabinono-1,4-lactone oxidase JYK04_RS31215 PF01565 FAD binding domain JYK04_RS31225 PF00762 Ferrochelatase JYK04_RS31230 PF00459 Inositol monophosphatase family JYK04_RS31240 PF00072 Response regulator receiver domain JYK04_RS31240 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS31245 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS31245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS31245 PF00672 HAMP domain JYK04_RS31270 PF00692 dUTPase JYK04_RS31285 PF00072 Response regulator receiver domain JYK04_RS31285 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS31300 PF02080 TrkA-C domain JYK04_RS31300 PF02254 TrkA-N domain JYK04_RS31305 PF02080 TrkA-C domain JYK04_RS31305 PF02254 TrkA-N domain JYK04_RS31310 PF13520 Amino acid permease JYK04_RS31315 PF01938 TRAM domain JYK04_RS31315 PF05958 tRNA (Uracil-5-)-methyltransferase JYK04_RS31320 PF02384 N-6 DNA Methylase JYK04_RS31320 PF12161 HsdM N-terminal domain JYK04_RS31325 PF02384 N-6 DNA Methylase JYK04_RS31325 PF12161 HsdM N-terminal domain JYK04_RS31330 PF01420 Type I restriction modification DNA specificity domain JYK04_RS31335 PF11867 Domain of unknown function (DUF3387) JYK04_RS31335 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JYK04_RS31335 PF18766 SWI2/SNF2 ATPase JYK04_RS31340 PF00067 Cytochrome P450 JYK04_RS31400 PF03621 MbtH-like protein JYK04_RS31405 PF00069 Protein kinase domain JYK04_RS31405 PF13360 PQQ-like domain JYK04_RS31415 PF00400 WD domain, G-beta repeat JYK04_RS31415 PF00069 Protein kinase domain JYK04_RS31420 PF01037 Lrp/AsnC ligand binding domain JYK04_RS31425 PF17763 Glutaminase/Asparaginase C-terminal domain JYK04_RS31425 PF00710 Asparaginase, N-terminal JYK04_RS31440 PF02310 B12 binding domain JYK04_RS31440 PF01642 Methylmalonyl-CoA mutase JYK04_RS31445 PF01642 Methylmalonyl-CoA mutase JYK04_RS31450 PF00480 ROK family JYK04_RS31455 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK04_RS31460 PF03358 NADPH-dependent FMN reductase JYK04_RS31470 PF00005 ABC transporter JYK04_RS31475 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS31480 PF00296 Luciferase-like monooxygenase JYK04_RS31485 PF00890 FAD binding domain JYK04_RS31485 PF02910 Fumarate reductase flavoprotein C-term JYK04_RS31495 PF08659 KR domain JYK04_RS31495 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS31495 PF00698 Acyl transferase domain JYK04_RS31495 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS31495 PF08990 Erythronolide synthase docking JYK04_RS31495 PF09277 Erythronolide synthase, docking JYK04_RS31495 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS31495 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS31495 PF14765 Polyketide synthase dehydratase JYK04_RS31495 PF00550 Phosphopantetheine attachment site JYK04_RS31505 PF04472 Cell division protein SepF JYK04_RS31535 PF02574 Homocysteine S-methyltransferase JYK04_RS31545 PF00149 Calcineurin-like phosphoesterase JYK04_RS31560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYK04_RS31560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYK04_RS31570 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS31575 PF01494 FAD binding domain JYK04_RS31605 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS31605 PF00501 AMP-binding enzyme JYK04_RS31610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS31610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS31610 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS31635 PF03466 LysR substrate binding domain JYK04_RS31635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS31645 PF00557 Metallopeptidase family M24 JYK04_RS31645 PF05195 Aminopeptidase P, N-terminal domain JYK04_RS31650 PF08453 Peptidase family M9 N-terminal JYK04_RS31650 PF04151 Bacterial pre-peptidase C-terminal domain JYK04_RS31650 PF18496 Collagenase G catalytic helper subdomain JYK04_RS31650 PF01752 Collagenase JYK04_RS31655 PF01266 FAD dependent oxidoreductase JYK04_RS31665 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS31665 PF04324 BFD-like [2Fe-2S] binding domain JYK04_RS31670 PF00701 Dihydrodipicolinate synthetase family JYK04_RS31675 PF05544 Proline racemase JYK04_RS31680 PF05544 Proline racemase JYK04_RS31690 PF07729 FCD domain JYK04_RS31690 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS31715 PF00149 Calcineurin-like phosphoesterase JYK04_RS31720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS31725 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS31725 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK04_RS31730 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS31735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS31735 PF00005 ABC transporter JYK04_RS31740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS31740 PF00005 ABC transporter JYK04_RS31760 PF00326 Prolyl oligopeptidase family JYK04_RS31760 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JYK04_RS31765 PF07690 Major Facilitator Superfamily JYK04_RS31775 PF00067 Cytochrome P450 JYK04_RS31790 PF04542 Sigma-70 region 2 JYK04_RS31790 PF08281 Sigma-70, region 4 JYK04_RS31815 PF00293 NUDIX domain JYK04_RS31825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYK04_RS31830 PF12802 MarR family JYK04_RS31835 PF00561 alpha/beta hydrolase fold JYK04_RS31840 PF07969 Amidohydrolase family JYK04_RS31845 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS31850 PF00694 Aconitase C-terminal domain JYK04_RS31850 PF00330 Aconitase family (aconitate hydratase) JYK04_RS31855 PF01547 Bacterial extracellular solute-binding protein JYK04_RS31860 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS31865 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS31875 PF00689 Cation transporting ATPase, C-terminus JYK04_RS31875 PF00690 Cation transporter/ATPase, N-terminus JYK04_RS31880 PF00480 ROK family JYK04_RS31880 PF01325 Iron dependent repressor, N-terminal DNA binding domain JYK04_RS31885 PF13407 Periplasmic binding protein domain JYK04_RS31890 PF00005 ABC transporter JYK04_RS31895 PF02653 Branched-chain amino acid transport system / permease component JYK04_RS31900 PF02779 Transketolase, pyrimidine binding domain JYK04_RS31900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JYK04_RS31900 PF02780 Transketolase, C-terminal domain JYK04_RS31905 PF13520 Amino acid permease JYK04_RS31910 PF08241 Methyltransferase domain JYK04_RS31915 PF03816 Cell envelope-related transcriptional attenuator domain JYK04_RS31920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK04_RS31920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK04_RS31920 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS31925 PF00108 Thiolase, N-terminal domain JYK04_RS31925 PF02803 Thiolase, C-terminal domain JYK04_RS31935 PF00570 HRDC domain JYK04_RS31935 PF01612 3'-5' exonuclease JYK04_RS31950 PF01208 Uroporphyrinogen decarboxylase (URO-D) JYK04_RS31955 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS31955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK04_RS31965 PF01593 Flavin containing amine oxidoreductase JYK04_RS31970 PF06778 Chlorite dismutase JYK04_RS31975 PF00561 alpha/beta hydrolase fold JYK04_RS31985 PF05114 Protein of unknown function (DUF692) JYK04_RS32000 PF00005 ABC transporter JYK04_RS32025 PF00149 Calcineurin-like phosphoesterase JYK04_RS32030 PF01522 Polysaccharide deacetylase JYK04_RS32045 PF00067 Cytochrome P450 JYK04_RS32075 PF01225 Mur ligase family, catalytic domain JYK04_RS32075 PF02875 Mur ligase family, glutamate ligase domain JYK04_RS32075 PF08245 Mur ligase middle domain JYK04_RS32080 PF01641 SelR domain JYK04_RS32130 PF00501 AMP-binding enzyme JYK04_RS32135 PF00535 Glycosyl transferase family 2 JYK04_RS32140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS32140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS32145 PF05506 Domain of unknown function (DUF756) JYK04_RS32145 PF04185 Phosphoesterase family JYK04_RS32165 PF00117 Glutamine amidotransferase class-I JYK04_RS32165 PF06418 CTP synthase N-terminus JYK04_RS32170 PF03466 LysR substrate binding domain JYK04_RS32170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS32175 PF01321 Creatinase/Prolidase N-terminal domain JYK04_RS32175 PF00557 Metallopeptidase family M24 JYK04_RS32180 PF11941 Domain of unknown function (DUF3459) JYK04_RS32180 PF00128 Alpha amylase, catalytic domain JYK04_RS32185 PF00498 FHA domain JYK04_RS32205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK04_RS32205 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS32210 PF03466 LysR substrate binding domain JYK04_RS32210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS32215 PF00128 Alpha amylase, catalytic domain JYK04_RS32225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK04_RS32225 PF00128 Alpha amylase, catalytic domain JYK04_RS32250 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JYK04_RS32265 PF03965 Penicillinase repressor JYK04_RS32280 PF09335 SNARE associated Golgi protein JYK04_RS32290 PF01569 PAP2 superfamily JYK04_RS32295 PF02673 Bacitracin resistance protein BacA JYK04_RS32305 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYK04_RS32305 PF02558 Ketopantoate reductase PanE/ApbA JYK04_RS32320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK04_RS32320 PF01799 [2Fe-2S] binding domain JYK04_RS32320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK04_RS32335 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS32340 PF00005 ABC transporter JYK04_RS32350 PF00009 Elongation factor Tu GTP binding domain JYK04_RS32355 PF01507 Phosphoadenosine phosphosulfate reductase family JYK04_RS32365 PF01507 Phosphoadenosine phosphosulfate reductase family JYK04_RS32370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYK04_RS32370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK04_RS32375 PF01047 MarR family JYK04_RS32375 PF00583 Acetyltransferase (GNAT) family JYK04_RS32385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS32385 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS32385 PF18158 Adaptive response protein AidB N-terminal domain JYK04_RS32400 PF12833 Helix-turn-helix domain JYK04_RS32425 PF00072 Response regulator receiver domain JYK04_RS32425 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS32435 PF03193 RsgA GTPase JYK04_RS32470 PF00082 Subtilase family JYK04_RS32470 PF05922 Peptidase inhibitor I9 JYK04_RS32485 PF00144 Beta-lactamase JYK04_RS32500 PF00205 Thiamine pyrophosphate enzyme, central domain JYK04_RS32500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK04_RS32500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK04_RS32520 PF07729 FCD domain JYK04_RS32520 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS32530 PF17853 GGDEF-like domain JYK04_RS32530 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS32530 PF05651 Putative sugar diacid recognition JYK04_RS32535 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK04_RS32535 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK04_RS32540 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS32540 PF01799 [2Fe-2S] binding domain JYK04_RS32545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK04_RS32545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK04_RS32550 PF00860 Permease family JYK04_RS32565 PF17668 Acetyltransferase (GNAT) domain JYK04_RS32565 PF13530 Sterol carrier protein domain JYK04_RS32585 PF02514 CobN/Magnesium Chelatase JYK04_RS32590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK04_RS32595 PF02570 Precorrin-8X methylmutase JYK04_RS32600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK04_RS32605 PF13302 Acetyltransferase (GNAT) domain JYK04_RS32610 PF02571 Precorrin-6x reductase CbiJ/CobK JYK04_RS32615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK04_RS32620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK04_RS32625 PF00106 short chain dehydrogenase JYK04_RS32665 PF00132 Bacterial transferase hexapeptide (six repeats) JYK04_RS32675 PF03808 Glycosyl transferase WecB/TagA/CpsF family JYK04_RS32680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYK04_RS32680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYK04_RS32680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYK04_RS32685 PF02350 UDP-N-acetylglucosamine 2-epimerase JYK04_RS32705 PF00535 Glycosyl transferase family 2 JYK04_RS32730 PF00535 Glycosyl transferase family 2 JYK04_RS32740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JYK04_RS32745 PF17836 PglD N-terminal domain JYK04_RS32745 PF00132 Bacterial transferase hexapeptide (six repeats) JYK04_RS32750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JYK04_RS32755 PF16363 GDP-mannose 4,6 dehydratase JYK04_RS32760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK04_RS32760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK04_RS32765 PF00535 Glycosyl transferase family 2 JYK04_RS32805 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS32805 PF02911 Formyl transferase, C-terminal domain JYK04_RS32805 PF00551 Formyl transferase JYK04_RS32810 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal JYK04_RS32810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JYK04_RS32815 PF00374 Nickel-dependent hydrogenase JYK04_RS32845 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JYK04_RS32850 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYK04_RS32855 PF01300 Telomere recombination JYK04_RS32855 PF00708 Acylphosphatase JYK04_RS32855 PF17788 HypF Kae1-like domain JYK04_RS32855 PF07503 HypF finger JYK04_RS32865 PF01924 Hydrogenase formation hypA family JYK04_RS32870 PF02769 AIR synthase related protein, C-terminal domain JYK04_RS32870 PF00586 AIR synthase related protein, N-terminal domain JYK04_RS32880 PF00999 Sodium/hydrogen exchanger family JYK04_RS32880 PF02254 TrkA-N domain JYK04_RS32890 PF05231 MASE1 JYK04_RS32890 PF07730 Histidine kinase JYK04_RS32890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS32895 PF00072 Response regulator receiver domain JYK04_RS32895 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS32905 PF03793 PASTA domain JYK04_RS32905 PF00069 Protein kinase domain JYK04_RS32915 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS32940 PF05139 Erythromycin esterase JYK04_RS32940 PF00156 Phosphoribosyl transferase domain JYK04_RS32945 PF01544 CorA-like Mg2+ transporter protein JYK04_RS32955 PF00145 C-5 cytosine-specific DNA methylase JYK04_RS32995 PF01544 CorA-like Mg2+ transporter protein JYK04_RS33005 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS33005 PF00501 AMP-binding enzyme JYK04_RS33010 PF00255 Glutathione peroxidase JYK04_RS33020 PF00205 Thiamine pyrophosphate enzyme, central domain JYK04_RS33020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK04_RS33020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK04_RS33030 PF00199 Catalase JYK04_RS33030 PF06628 Catalase-related immune-responsive JYK04_RS33035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK04_RS33035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK04_RS33040 PF01261 Xylose isomerase-like TIM barrel JYK04_RS33060 PF00576 HIUase/Transthyretin family JYK04_RS33065 PF01014 Uricase JYK04_RS33070 PF01979 Amidohydrolase family JYK04_RS33075 PF00860 Permease family JYK04_RS33105 PF01274 Malate synthase JYK04_RS33110 PF12804 MobA-like NTP transferase domain JYK04_RS33120 PF00155 Aminotransferase class I and II JYK04_RS33130 PF00072 Response regulator receiver domain JYK04_RS33130 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS33135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS33135 PF07730 Histidine kinase JYK04_RS33140 PF02687 FtsX-like permease family JYK04_RS33145 PF00005 ABC transporter JYK04_RS33150 PF01614 Bacterial transcriptional regulator JYK04_RS33150 PF09339 IclR helix-turn-helix domain JYK04_RS33155 PF01979 Amidohydrolase family JYK04_RS33160 PF03561 Allantoicase repeat JYK04_RS33175 PF00652 Ricin-type beta-trefoil lectin domain JYK04_RS33175 PF00331 Glycosyl hydrolase family 10 JYK04_RS33185 PF00589 Phage integrase family JYK04_RS33190 PF12728 Helix-turn-helix domain JYK04_RS33220 PF07702 UTRA domain JYK04_RS33220 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS33235 PF13344 Haloacid dehalogenase-like hydrolase JYK04_RS33235 PF00293 NUDIX domain JYK04_RS33275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK04_RS33275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK04_RS33285 PF02653 Branched-chain amino acid transport system / permease component JYK04_RS33295 PF00480 ROK family JYK04_RS33320 PF00005 ABC transporter JYK04_RS33330 PF03734 L,D-transpeptidase catalytic domain JYK04_RS33330 PF17964 Bacterial Ig domain JYK04_RS33340 PF03023 Lipid II flippase MurJ JYK04_RS33345 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS33345 PF00072 Response regulator receiver domain JYK04_RS33350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS33350 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS33350 PF00672 HAMP domain JYK04_RS33360 PF00067 Cytochrome P450 JYK04_RS33375 PF00557 Metallopeptidase family M24 JYK04_RS33410 PF00202 Aminotransferase class-III JYK04_RS33415 PF01979 Amidohydrolase family JYK04_RS33435 PF01494 FAD binding domain JYK04_RS33455 PF00459 Inositol monophosphatase family JYK04_RS33465 PF01661 Macro domain JYK04_RS33470 PF01037 Lrp/AsnC ligand binding domain JYK04_RS33480 PF00155 Aminotransferase class I and II JYK04_RS33485 PF00174 Oxidoreductase molybdopterin binding domain JYK04_RS33490 PF08448 PAS fold JYK04_RS33490 PF13466 STAS domain JYK04_RS33490 PF13581 Histidine kinase-like ATPase domain JYK04_RS33490 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS33495 PF13581 Histidine kinase-like ATPase domain JYK04_RS33495 PF08448 PAS fold JYK04_RS33495 PF13466 STAS domain JYK04_RS33495 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS33500 PF01965 DJ-1/PfpI family JYK04_RS33500 PF12833 Helix-turn-helix domain JYK04_RS33505 PF00857 Isochorismatase family JYK04_RS33510 PF02595 Glycerate kinase family JYK04_RS33515 PF02028 BCCT, betaine/carnitine/choline family transporter JYK04_RS33525 PF00535 Glycosyl transferase family 2 JYK04_RS33545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYK04_RS33545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYK04_RS33550 PF06029 AlkA N-terminal domain JYK04_RS33550 PF00730 HhH-GPD superfamily base excision DNA repair protein JYK04_RS33550 PF12833 Helix-turn-helix domain JYK04_RS33550 PF02805 Metal binding domain of Ada JYK04_RS33560 PF02666 Phosphatidylserine decarboxylase JYK04_RS33565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS33565 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS33565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS33575 PF03328 HpcH/HpaI aldolase/citrate lyase family JYK04_RS33580 PF02310 B12 binding domain JYK04_RS33580 PF01642 Methylmalonyl-CoA mutase JYK04_RS33585 PF00107 Zinc-binding dehydrogenase JYK04_RS33585 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS33590 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS33590 PF17754 MftR C-terminal domain JYK04_RS33595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK04_RS33595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK04_RS33610 PF00561 alpha/beta hydrolase fold JYK04_RS33615 PF04055 Radical SAM superfamily JYK04_RS33625 PF04951 D-aminopeptidase JYK04_RS33630 PF07687 Peptidase dimerisation domain JYK04_RS33630 PF01546 Peptidase family M20/M25/M40 JYK04_RS33655 PF17128 Domain of unknown function (DUF5107) JYK04_RS33655 PF13181 Tetratricopeptide repeat JYK04_RS33660 PF08241 Methyltransferase domain JYK04_RS33665 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain JYK04_RS33675 PF12706 Beta-lactamase superfamily domain JYK04_RS33710 PF13520 Amino acid permease JYK04_RS33730 PF04545 Sigma-70, region 4 JYK04_RS33730 PF04542 Sigma-70 region 2 JYK04_RS33730 PF04539 Sigma-70 region 3 JYK04_RS33730 PF00140 Sigma-70 factor, region 1.2 JYK04_RS33740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JYK04_RS33740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JYK04_RS33750 PF01494 FAD binding domain JYK04_RS33775 PF01593 Flavin containing amine oxidoreductase JYK04_RS33780 PF01329 Pterin 4 alpha carbinolamine dehydratase JYK04_RS33785 PF08241 Methyltransferase domain JYK04_RS33790 PF00248 Aldo/keto reductase family JYK04_RS33795 PF00005 ABC transporter JYK04_RS33795 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK04_RS33800 PF00005 ABC transporter JYK04_RS33810 PF00501 AMP-binding enzyme JYK04_RS33815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS33815 PF03466 LysR substrate binding domain JYK04_RS33820 PF13593 SBF-like CPA transporter family (DUF4137) JYK04_RS33835 PF02634 FdhD/NarQ family JYK04_RS33840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS33840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS33845 PF06772 Bacterial low temperature requirement A protein (LtrA) JYK04_RS33865 PF09334 tRNA synthetases class I (M) JYK04_RS33875 PF07690 Major Facilitator Superfamily JYK04_RS33880 PF00072 Response regulator receiver domain JYK04_RS33880 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS33890 PF00069 Protein kinase domain JYK04_RS33925 PF02056 Family 4 glycosyl hydrolase JYK04_RS33925 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYK04_RS33930 PF07690 Major Facilitator Superfamily JYK04_RS33940 PF00293 NUDIX domain JYK04_RS33960 PF04679 ATP dependent DNA ligase C terminal region JYK04_RS33960 PF01068 ATP dependent DNA ligase domain JYK04_RS33965 PF04679 ATP dependent DNA ligase C terminal region JYK04_RS33965 PF01068 ATP dependent DNA ligase domain JYK04_RS33965 PF13298 DNA polymerase Ligase (LigD) JYK04_RS33975 PF12802 MarR family JYK04_RS33980 PF00561 alpha/beta hydrolase fold JYK04_RS33990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK04_RS33990 PF18029 Glyoxalase-like domain JYK04_RS33995 PF02467 Transcription factor WhiB JYK04_RS34020 PF03405 Fatty acid desaturase JYK04_RS34025 PF12848 ABC transporter JYK04_RS34025 PF00005 ABC transporter JYK04_RS34045 PF01979 Amidohydrolase family JYK04_RS34065 PF04493 Endonuclease V JYK04_RS34070 PF03435 Saccharopine dehydrogenase NADP binding domain JYK04_RS34075 PF02515 CoA-transferase family III JYK04_RS34080 PF00296 Luciferase-like monooxygenase JYK04_RS34085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS34085 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS34085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS34090 PF02803 Thiolase, C-terminal domain JYK04_RS34090 PF00108 Thiolase, N-terminal domain JYK04_RS34095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK04_RS34095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK04_RS34095 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS34105 PF13411 MerR HTH family regulatory protein JYK04_RS34110 PF00501 AMP-binding enzyme JYK04_RS34140 PF03372 Endonuclease/Exonuclease/phosphatase family JYK04_RS34145 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) JYK04_RS34150 PF01433 Peptidase family M1 domain JYK04_RS34150 PF11838 ERAP1-like C-terminal domain JYK04_RS34165 PF00575 S1 RNA binding domain JYK04_RS34165 PF09371 Tex-like protein N-terminal domain JYK04_RS34165 PF16921 Tex protein YqgF-like domain JYK04_RS34165 PF17674 HHH domain JYK04_RS34180 PF00106 short chain dehydrogenase JYK04_RS34190 PF00005 ABC transporter JYK04_RS34195 PF01965 DJ-1/PfpI family JYK04_RS34195 PF12833 Helix-turn-helix domain JYK04_RS34200 PF01965 DJ-1/PfpI family JYK04_RS34205 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS34220 PF00293 NUDIX domain JYK04_RS34225 PF03551 Transcriptional regulator PadR-like family JYK04_RS34225 PF13847 Methyltransferase domain JYK04_RS34240 PF13685 Iron-containing alcohol dehydrogenase JYK04_RS34260 PF00005 ABC transporter JYK04_RS34280 PF01593 Flavin containing amine oxidoreductase JYK04_RS34285 PF00348 Polyprenyl synthetase JYK04_RS34290 PF13243 Squalene-hopene cyclase C-terminal domain JYK04_RS34290 PF13249 Squalene-hopene cyclase N-terminal domain JYK04_RS34300 PF06463 Molybdenum Cofactor Synthesis C JYK04_RS34300 PF04055 Radical SAM superfamily JYK04_RS34305 PF00202 Aminotransferase class-III JYK04_RS34315 PF01551 Peptidase family M23 JYK04_RS34320 PF13472 GDSL-like Lipase/Acylhydrolase family JYK04_RS34325 PF12706 Beta-lactamase superfamily domain JYK04_RS34385 PF13091 PLD-like domain JYK04_RS34385 PF13396 Phospholipase_D-nuclease N-terminal JYK04_RS34390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYK04_RS34390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYK04_RS34395 PF07690 Major Facilitator Superfamily JYK04_RS34400 PF01022 Bacterial regulatory protein, arsR family JYK04_RS34410 PF13344 Haloacid dehalogenase-like hydrolase JYK04_RS34410 PF00293 NUDIX domain JYK04_RS34415 PF01810 LysE type translocator JYK04_RS34420 PF03466 LysR substrate binding domain JYK04_RS34420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS34430 PF01544 CorA-like Mg2+ transporter protein JYK04_RS34435 PF01374 Glycosyl hydrolase family 46 JYK04_RS34440 PF05656 Protein of unknown function (DUF805) JYK04_RS34445 PF03971 Monomeric isocitrate dehydrogenase JYK04_RS34470 PF00266 Aminotransferase class-V JYK04_RS34475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK04_RS34480 PF02754 Cysteine-rich domain JYK04_RS34485 PF13183 4Fe-4S dicluster domain JYK04_RS34485 PF02589 LUD domain JYK04_RS34485 PF11870 Domain of unknown function (DUF3390) JYK04_RS34490 PF02589 LUD domain JYK04_RS34495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK04_RS34520 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS34555 PF00005 ABC transporter JYK04_RS34560 PF08021 Siderophore-interacting FAD-binding domain JYK04_RS34560 PF00005 ABC transporter JYK04_RS34560 PF00664 ABC transporter transmembrane region JYK04_RS34560 PF04954 Siderophore-interacting protein JYK04_RS34565 PF02909 Tetracyclin repressor-like, C-terminal domain JYK04_RS34565 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS34585 PF04371 Porphyromonas-type peptidyl-arginine deiminase JYK04_RS34595 PF00069 Protein kinase domain JYK04_RS34595 PF13360 PQQ-like domain JYK04_RS34600 PF04371 Porphyromonas-type peptidyl-arginine deiminase JYK04_RS34610 PF00547 Urease, gamma subunit JYK04_RS34610 PF00699 Urease beta subunit JYK04_RS34615 PF01979 Amidohydrolase family JYK04_RS34615 PF00449 Urease alpha-subunit, N-terminal domain JYK04_RS34620 PF04371 Porphyromonas-type peptidyl-arginine deiminase JYK04_RS34625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK04_RS34630 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS34635 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS34635 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK04_RS34640 PF00005 ABC transporter JYK04_RS34640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS34645 PF00005 ABC transporter JYK04_RS34645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK04_RS34655 PF04371 Porphyromonas-type peptidyl-arginine deiminase JYK04_RS34660 PF00005 ABC transporter JYK04_RS34660 PF00664 ABC transporter transmembrane region JYK04_RS34665 PF12697 Alpha/beta hydrolase family JYK04_RS34675 PF00484 Carbonic anhydrase JYK04_RS34680 PF01593 Flavin containing amine oxidoreductase JYK04_RS34690 PF00857 Isochorismatase family JYK04_RS34705 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS34710 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS34710 PF02909 Tetracyclin repressor-like, C-terminal domain JYK04_RS34735 PF04185 Phosphoesterase family JYK04_RS34745 PF13649 Methyltransferase domain JYK04_RS34750 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JYK04_RS34755 PF00561 alpha/beta hydrolase fold JYK04_RS34765 PF08659 KR domain JYK04_RS34765 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS34765 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS34765 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS34765 PF00550 Phosphopantetheine attachment site JYK04_RS34765 PF00698 Acyl transferase domain JYK04_RS34765 PF14765 Polyketide synthase dehydratase JYK04_RS34765 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS34765 PF00107 Zinc-binding dehydrogenase JYK04_RS34770 PF00550 Phosphopantetheine attachment site JYK04_RS34770 PF14765 Polyketide synthase dehydratase JYK04_RS34770 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS34770 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS34770 PF00698 Acyl transferase domain JYK04_RS34770 PF00698 Acyl transferase domain JYK04_RS34770 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS34770 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS34770 PF08659 KR domain JYK04_RS34770 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS34770 PF00550 Phosphopantetheine attachment site JYK04_RS34770 PF14765 Polyketide synthase dehydratase JYK04_RS34770 PF08659 KR domain JYK04_RS34770 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS34775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS34775 PF03466 LysR substrate binding domain JYK04_RS34785 PF00067 Cytochrome P450 JYK04_RS34810 PF16499 Alpha galactosidase A JYK04_RS34810 PF17801 Alpha galactosidase C-terminal beta sandwich domain JYK04_RS34825 PF00561 alpha/beta hydrolase fold JYK04_RS34845 PF00582 Universal stress protein family JYK04_RS34855 PF12833 Helix-turn-helix domain JYK04_RS34855 PF02311 AraC-like ligand binding domain JYK04_RS34860 PF00144 Beta-lactamase JYK04_RS34890 PF13416 Bacterial extracellular solute-binding protein JYK04_RS34895 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS34900 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS34915 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS34915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK04_RS34925 PF07690 Major Facilitator Superfamily JYK04_RS34935 PF01593 Flavin containing amine oxidoreductase JYK04_RS34945 PF03176 MMPL family JYK04_RS34950 PF01047 MarR family JYK04_RS34955 PF03466 LysR substrate binding domain JYK04_RS34955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS34960 PF00561 alpha/beta hydrolase fold JYK04_RS34975 PF10531 SLBB domain JYK04_RS34975 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JYK04_RS34975 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYK04_RS35000 PF04542 Sigma-70 region 2 JYK04_RS35000 PF08281 Sigma-70, region 4 JYK04_RS35025 PF02515 CoA-transferase family III JYK04_RS35030 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35030 PF00501 AMP-binding enzyme JYK04_RS35035 PF13411 MerR HTH family regulatory protein JYK04_RS35055 PF02687 FtsX-like permease family JYK04_RS35055 PF00005 ABC transporter JYK04_RS35055 PF12704 MacB-like periplasmic core domain JYK04_RS35075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK04_RS35075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK04_RS35075 PF01799 [2Fe-2S] binding domain JYK04_RS35080 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK04_RS35080 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK04_RS35085 PF17853 GGDEF-like domain JYK04_RS35085 PF13556 PucR C-terminal helix-turn-helix domain JYK04_RS35085 PF05651 Putative sugar diacid recognition JYK04_RS35090 PF03459 TOBE domain JYK04_RS35120 PF13581 Histidine kinase-like ATPase domain JYK04_RS35120 PF08448 PAS fold JYK04_RS35120 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS35120 PF13466 STAS domain JYK04_RS35130 PF00924 Mechanosensitive ion channel JYK04_RS35140 PF01425 Amidase JYK04_RS35150 PF10996 Beta-Casp domain JYK04_RS35150 PF00753 Metallo-beta-lactamase superfamily JYK04_RS35150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JYK04_RS35160 PF00561 alpha/beta hydrolase fold JYK04_RS35165 PF00975 Thioesterase domain JYK04_RS35165 PF00550 Phosphopantetheine attachment site JYK04_RS35165 PF00668 Condensation domain JYK04_RS35165 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35165 PF00501 AMP-binding enzyme JYK04_RS35170 PF00206 Lyase JYK04_RS35170 PF14698 Argininosuccinate lyase C-terminal JYK04_RS35175 PF00288 GHMP kinases N terminal domain JYK04_RS35180 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS35185 PF03621 MbtH-like protein JYK04_RS35190 PF00391 PEP-utilising enzyme, mobile domain JYK04_RS35190 PF00501 AMP-binding enzyme JYK04_RS35190 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35190 PF00668 Condensation domain JYK04_RS35190 PF08241 Methyltransferase domain JYK04_RS35190 PF00550 Phosphopantetheine attachment site JYK04_RS35190 PF00975 Thioesterase domain JYK04_RS35195 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35195 PF00668 Condensation domain JYK04_RS35195 PF00550 Phosphopantetheine attachment site JYK04_RS35195 PF00975 Thioesterase domain JYK04_RS35195 PF00501 AMP-binding enzyme JYK04_RS35200 PF00550 Phosphopantetheine attachment site JYK04_RS35200 PF00668 Condensation domain JYK04_RS35200 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35200 PF00501 AMP-binding enzyme JYK04_RS35205 PF00668 Condensation domain JYK04_RS35205 PF00550 Phosphopantetheine attachment site JYK04_RS35205 PF00501 AMP-binding enzyme JYK04_RS35205 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35220 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS35245 PF08220 DeoR-like helix-turn-helix domain JYK04_RS35245 PF00455 DeoR C terminal sensor domain JYK04_RS35255 PF13419 Haloacid dehalogenase-like hydrolase JYK04_RS35265 PF00202 Aminotransferase class-III JYK04_RS35275 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS35275 PF00107 Zinc-binding dehydrogenase JYK04_RS35280 PF01301 Glycosyl hydrolases family 35 JYK04_RS35295 PF00550 Phosphopantetheine attachment site JYK04_RS35295 PF00501 AMP-binding enzyme JYK04_RS35295 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35295 PF00668 Condensation domain JYK04_RS35300 PF00067 Cytochrome P450 JYK04_RS35310 PF02913 FAD linked oxidases, C-terminal domain JYK04_RS35310 PF01565 FAD binding domain JYK04_RS35320 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK04_RS35330 PF00155 Aminotransferase class I and II JYK04_RS35340 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS35340 PF13581 Histidine kinase-like ATPase domain JYK04_RS35340 PF08448 PAS fold JYK04_RS35340 PF13466 STAS domain JYK04_RS35350 PF00561 alpha/beta hydrolase fold JYK04_RS35355 PF00144 Beta-lactamase JYK04_RS35375 PF00144 Beta-lactamase JYK04_RS35390 PF00296 Luciferase-like monooxygenase JYK04_RS35400 PF01263 Aldose 1-epimerase JYK04_RS35410 PF00155 Aminotransferase class I and II JYK04_RS35420 PF00501 AMP-binding enzyme JYK04_RS35420 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35420 PF00668 Condensation domain JYK04_RS35420 PF00550 Phosphopantetheine attachment site JYK04_RS35420 PF00975 Thioesterase domain JYK04_RS35425 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS35425 PF00501 AMP-binding enzyme JYK04_RS35460 PF02261 Aspartate decarboxylase JYK04_RS35490 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JYK04_RS35490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK04_RS35495 PF06737 Transglycosylase-like domain JYK04_RS35505 PF00106 short chain dehydrogenase JYK04_RS35550 PF05175 Methyltransferase small domain JYK04_RS35550 PF08468 Methyltransferase small domain N-terminal JYK04_RS35560 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYK04_RS35560 PF06827 Zinc finger found in FPG and IleRS JYK04_RS35580 PF04542 Sigma-70 region 2 JYK04_RS35580 PF04545 Sigma-70, region 4 JYK04_RS35595 PF00152 tRNA synthetases class II (D, K and N) JYK04_RS35595 PF09924 Uncharacterised conserved protein (DUF2156) JYK04_RS35595 PF16995 Transmembrane region of lysyl-tRNA synthetase JYK04_RS35595 PF01336 OB-fold nucleic acid binding domain JYK04_RS35600 PF01522 Polysaccharide deacetylase JYK04_RS35630 PF00990 Diguanylate cyclase, GGDEF domain JYK04_RS35630 PF00563 EAL domain JYK04_RS35630 PF03707 Bacterial signalling protein N terminal repeat JYK04_RS35635 PF01494 FAD binding domain JYK04_RS35640 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS35645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS35645 PF03466 LysR substrate binding domain JYK04_RS35655 PF00890 FAD binding domain JYK04_RS35655 PF02910 Fumarate reductase flavoprotein C-term JYK04_RS35660 PF13085 2Fe-2S iron-sulfur cluster binding domain JYK04_RS35670 PF17755 UvrA DNA-binding domain JYK04_RS35685 PF00296 Luciferase-like monooxygenase JYK04_RS35695 PF07311 Dodecin JYK04_RS35700 PF01547 Bacterial extracellular solute-binding protein JYK04_RS35715 PF10017 Histidine-specific methyltransferase, SAM-dependent JYK04_RS35725 PF12867 DinB superfamily JYK04_RS35725 PF03781 Sulfatase-modifying factor enzyme 1 JYK04_RS35730 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK04_RS35755 PF01447 Thermolysin metallopeptidase, catalytic domain JYK04_RS35755 PF02868 Thermolysin metallopeptidase, alpha-helical domain JYK04_RS35755 PF16485 Protealysin propeptide JYK04_RS35760 PF01596 O-methyltransferase JYK04_RS35765 PF01425 Amidase JYK04_RS35770 PF00561 alpha/beta hydrolase fold JYK04_RS35780 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS35785 PF00108 Thiolase, N-terminal domain JYK04_RS35785 PF02803 Thiolase, C-terminal domain JYK04_RS35790 PF00171 Aldehyde dehydrogenase family JYK04_RS35795 PF00085 Thioredoxin JYK04_RS35800 PF00400 WD domain, G-beta repeat JYK04_RS35800 PF12894 Anaphase-promoting complex subunit 4 WD40 domain JYK04_RS35815 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS35815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK04_RS35830 PF00149 Calcineurin-like phosphoesterase JYK04_RS35855 PF00376 MerR family regulatory protein JYK04_RS35855 PF09278 MerR, DNA binding JYK04_RS35860 PF05175 Methyltransferase small domain JYK04_RS35870 PF02678 Pirin JYK04_RS35870 PF05726 Pirin C-terminal cupin domain JYK04_RS35940 PF13276 HTH-like domain JYK04_RS35940 PF00665 Integrase core domain JYK04_RS35940 PF13333 Integrase core domain JYK04_RS35950 PF01406 tRNA synthetases class I (C) catalytic domain JYK04_RS36010 PF08338 Domain of unknown function (DUF1731) JYK04_RS36010 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS36030 PF07690 Major Facilitator Superfamily JYK04_RS36035 PF00364 Biotin-requiring enzyme JYK04_RS36035 PF00561 alpha/beta hydrolase fold JYK04_RS36085 PF00975 Thioesterase domain JYK04_RS36095 PF00072 Response regulator receiver domain JYK04_RS36095 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS36100 PF07730 Histidine kinase JYK04_RS36120 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36120 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36120 PF00550 Phosphopantetheine attachment site JYK04_RS36120 PF14765 Polyketide synthase dehydratase JYK04_RS36120 PF08659 KR domain JYK04_RS36120 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36120 PF00698 Acyl transferase domain JYK04_RS36125 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36125 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36125 PF08659 KR domain JYK04_RS36125 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS36125 PF00550 Phosphopantetheine attachment site JYK04_RS36125 PF14765 Polyketide synthase dehydratase JYK04_RS36125 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36125 PF00698 Acyl transferase domain JYK04_RS36130 PF08659 KR domain JYK04_RS36130 PF00698 Acyl transferase domain JYK04_RS36130 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36130 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36130 PF14765 Polyketide synthase dehydratase JYK04_RS36130 PF00550 Phosphopantetheine attachment site JYK04_RS36130 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36135 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36135 PF00698 Acyl transferase domain JYK04_RS36135 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36135 PF08990 Erythronolide synthase docking JYK04_RS36135 PF18369 Polyketide synthase dimerisation element domain JYK04_RS36135 PF00550 Phosphopantetheine attachment site JYK04_RS36135 PF00975 Thioesterase domain JYK04_RS36135 PF08659 KR domain JYK04_RS36135 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36140 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36140 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36140 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36140 PF00698 Acyl transferase domain JYK04_RS36140 PF00550 Phosphopantetheine attachment site JYK04_RS36140 PF14765 Polyketide synthase dehydratase JYK04_RS36140 PF08659 KR domain JYK04_RS36145 PF00698 Acyl transferase domain JYK04_RS36145 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36145 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36145 PF00550 Phosphopantetheine attachment site JYK04_RS36145 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36145 PF08659 KR domain JYK04_RS36145 PF14765 Polyketide synthase dehydratase JYK04_RS36150 PF08659 KR domain JYK04_RS36150 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36150 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36150 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36150 PF00550 Phosphopantetheine attachment site JYK04_RS36150 PF00698 Acyl transferase domain JYK04_RS36155 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36155 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS36155 PF14765 Polyketide synthase dehydratase JYK04_RS36155 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36155 PF08659 KR domain JYK04_RS36155 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36155 PF00550 Phosphopantetheine attachment site JYK04_RS36155 PF00698 Acyl transferase domain JYK04_RS36160 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36160 PF00550 Phosphopantetheine attachment site JYK04_RS36160 PF00698 Acyl transferase domain JYK04_RS36160 PF14765 Polyketide synthase dehydratase JYK04_RS36160 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS36160 PF08659 KR domain JYK04_RS36160 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36160 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36175 PF00005 ABC transporter JYK04_RS36180 PF00483 Nucleotidyl transferase JYK04_RS36185 PF00975 Thioesterase domain JYK04_RS36185 PF00501 AMP-binding enzyme JYK04_RS36185 PF00550 Phosphopantetheine attachment site JYK04_RS36185 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS36185 PF00668 Condensation domain JYK04_RS36190 PF00501 AMP-binding enzyme JYK04_RS36190 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS36195 PF01593 Flavin containing amine oxidoreductase JYK04_RS36200 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JYK04_RS36200 PF01648 4'-phosphopantetheinyl transferase superfamily JYK04_RS36205 PF00149 Calcineurin-like phosphoesterase JYK04_RS36215 PF01039 Carboxyl transferase domain JYK04_RS36220 PF00491 Arginase family JYK04_RS36230 PF12833 Helix-turn-helix domain JYK04_RS36230 PF01965 DJ-1/PfpI family JYK04_RS36235 PF00561 alpha/beta hydrolase fold JYK04_RS36250 PF00753 Metallo-beta-lactamase superfamily JYK04_RS36255 PF01965 DJ-1/PfpI family JYK04_RS36270 PF13091 PLD-like domain JYK04_RS36270 PF13396 Phospholipase_D-nuclease N-terminal JYK04_RS36280 PF00313 'Cold-shock' DNA-binding domain JYK04_RS36285 PF00271 Helicase conserved C-terminal domain JYK04_RS36285 PF00270 DEAD/DEAH box helicase JYK04_RS36295 PF12697 Alpha/beta hydrolase family JYK04_RS36300 PF13581 Histidine kinase-like ATPase domain JYK04_RS36300 PF08448 PAS fold JYK04_RS36300 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS36300 PF13466 STAS domain JYK04_RS36315 PF01095 Pectinesterase JYK04_RS36320 PF04542 Sigma-70 region 2 JYK04_RS36320 PF08281 Sigma-70, region 4 JYK04_RS36430 PF03060 Nitronate monooxygenase JYK04_RS36450 PF00202 Aminotransferase class-III JYK04_RS36455 PF04444 Catechol dioxygenase N terminus JYK04_RS36455 PF00775 Dioxygenase JYK04_RS36465 PF00480 ROK family JYK04_RS36470 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS36470 PF00107 Zinc-binding dehydrogenase JYK04_RS36480 PF01451 Low molecular weight phosphotyrosine protein phosphatase JYK04_RS36490 PF01022 Bacterial regulatory protein, arsR family JYK04_RS36495 PF00230 Major intrinsic protein JYK04_RS36545 PF01022 Bacterial regulatory protein, arsR family JYK04_RS36560 PF00501 AMP-binding enzyme JYK04_RS36560 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS36570 PF12833 Helix-turn-helix domain JYK04_RS36575 PF05853 beta-keto acid cleavage enzyme JYK04_RS36580 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS36580 PF00107 Zinc-binding dehydrogenase JYK04_RS36585 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK04_RS36590 PF00083 Sugar (and other) transporter JYK04_RS36630 PF01223 DNA/RNA non-specific endonuclease JYK04_RS36635 PF09364 XFP N-terminal domain JYK04_RS36635 PF09363 XFP C-terminal domain JYK04_RS36635 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JYK04_RS36640 PF00582 Universal stress protein family JYK04_RS36645 PF00072 Response regulator receiver domain JYK04_RS36645 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS36655 PF12900 Pyridoxamine 5'-phosphate oxidase JYK04_RS36660 PF07730 Histidine kinase JYK04_RS36660 PF13185 GAF domain JYK04_RS36660 PF13492 GAF domain JYK04_RS36660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS36665 PF03976 Polyphosphate kinase 2 (PPK2) JYK04_RS36680 PF02082 Transcriptional regulator JYK04_RS36685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS36685 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS36685 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS36690 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS36705 PF00144 Beta-lactamase JYK04_RS36725 PF01544 CorA-like Mg2+ transporter protein JYK04_RS36750 PF13466 STAS domain JYK04_RS36750 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS36750 PF13581 Histidine kinase-like ATPase domain JYK04_RS36750 PF08448 PAS fold JYK04_RS36755 PF00106 short chain dehydrogenase JYK04_RS36760 PF13530 Sterol carrier protein domain JYK04_RS36760 PF17668 Acetyltransferase (GNAT) domain JYK04_RS36775 PF00069 Protein kinase domain JYK04_RS36810 PF00067 Cytochrome P450 JYK04_RS36825 PF03704 Bacterial transcriptional activator domain JYK04_RS36825 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS36825 PF00931 NB-ARC domain JYK04_RS36845 PF10099 Anti-sigma-K factor rskA JYK04_RS36850 PF01300 Telomere recombination JYK04_RS36855 PF00484 Carbonic anhydrase JYK04_RS36865 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS36865 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS36865 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS36865 PF08990 Erythronolide synthase docking JYK04_RS36865 PF09277 Erythronolide synthase, docking JYK04_RS36865 PF00698 Acyl transferase domain JYK04_RS36865 PF08659 KR domain JYK04_RS36865 PF14765 Polyketide synthase dehydratase JYK04_RS36865 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS36865 PF00550 Phosphopantetheine attachment site JYK04_RS36890 PF00723 Glycosyl hydrolases family 15 JYK04_RS36895 PF13847 Methyltransferase domain JYK04_RS36900 PF00132 Bacterial transferase hexapeptide (six repeats) JYK04_RS36910 PF01654 Cytochrome bd terminal oxidase subunit I JYK04_RS36920 PF00732 GMC oxidoreductase JYK04_RS36920 PF05199 GMC oxidoreductase JYK04_RS36930 PF01427 D-ala-D-ala dipeptidase JYK04_RS36940 PF03412 Peptidase C39 family JYK04_RS36940 PF00005 ABC transporter JYK04_RS36940 PF00664 ABC transporter transmembrane region JYK04_RS36945 PF00005 ABC transporter JYK04_RS36945 PF00664 ABC transporter transmembrane region JYK04_RS36945 PF03412 Peptidase C39 family JYK04_RS36970 PF00271 Helicase conserved C-terminal domain JYK04_RS36970 PF16124 RecQ zinc-binding JYK04_RS36970 PF00570 HRDC domain JYK04_RS36970 PF00270 DEAD/DEAH box helicase JYK04_RS36970 PF09382 RQC domain JYK04_RS36980 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS36980 PF00107 Zinc-binding dehydrogenase JYK04_RS37025 PF02566 OsmC-like protein JYK04_RS37040 PF09967 VWA-like domain (DUF2201) JYK04_RS37040 PF13203 Putative metallopeptidase domain JYK04_RS37065 PF03793 PASTA domain JYK04_RS37065 PF00069 Protein kinase domain JYK04_RS37070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS37070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS37075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS37075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS37080 PF01370 NAD dependent epimerase/dehydratase family JYK04_RS37080 PF00550 Phosphopantetheine attachment site JYK04_RS37080 PF00501 AMP-binding enzyme JYK04_RS37085 PF00501 AMP-binding enzyme JYK04_RS37085 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS37085 PF00668 Condensation domain JYK04_RS37085 PF00550 Phosphopantetheine attachment site JYK04_RS37090 PF02911 Formyl transferase, C-terminal domain JYK04_RS37090 PF00551 Formyl transferase JYK04_RS37100 PF02525 Flavodoxin-like fold JYK04_RS37115 PF01425 Amidase JYK04_RS37120 PF13977 BetI-type transcriptional repressor, C-terminal JYK04_RS37120 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS37145 PF03466 LysR substrate binding domain JYK04_RS37145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS37150 PF00107 Zinc-binding dehydrogenase JYK04_RS37150 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS37155 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JYK04_RS37170 PF00005 ABC transporter JYK04_RS37175 PF01032 FecCD transport family JYK04_RS37180 PF01497 Periplasmic binding protein JYK04_RS37185 PF00814 Glycoprotease family JYK04_RS37195 PF00005 ABC transporter JYK04_RS37240 PF00768 D-alanyl-D-alanine carboxypeptidase JYK04_RS37240 PF07943 Penicillin-binding protein 5, C-terminal domain JYK04_RS37245 PF00561 alpha/beta hydrolase fold JYK04_RS37250 PF13305 Tetracyclin repressor-like, C-terminal domain JYK04_RS37250 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS37275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYK04_RS37275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYK04_RS37280 PF01266 FAD dependent oxidoreductase JYK04_RS37285 PF17806 Sarcosine oxidase A3 domain JYK04_RS37285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS37285 PF08669 Glycine cleavage T-protein C-terminal barrel domain JYK04_RS37285 PF01571 Aminomethyltransferase folate-binding domain JYK04_RS37325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYK04_RS37340 PF00916 Sulfate permease family JYK04_RS37340 PF01740 STAS domain JYK04_RS37345 PF00689 Cation transporting ATPase, C-terminus JYK04_RS37345 PF00690 Cation transporter/ATPase, N-terminus JYK04_RS37350 PF03976 Polyphosphate kinase 2 (PPK2) JYK04_RS37365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK04_RS37385 PF04542 Sigma-70 region 2 JYK04_RS37385 PF08281 Sigma-70, region 4 JYK04_RS37390 PF03795 YCII-related domain JYK04_RS37400 PF02342 TerD domain JYK04_RS37415 PF07690 Major Facilitator Superfamily JYK04_RS37435 PF00348 Polyprenyl synthetase JYK04_RS37440 PF00291 Pyridoxal-phosphate dependent enzyme JYK04_RS37440 PF00585 C-terminal regulatory domain of Threonine dehydratase JYK04_RS37445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS37445 PF03466 LysR substrate binding domain JYK04_RS37485 PF08241 Methyltransferase domain JYK04_RS37495 PF00067 Cytochrome P450 JYK04_RS37530 PF06441 Epoxide hydrolase N terminus JYK04_RS37550 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS37550 PF02909 Tetracyclin repressor-like, C-terminal domain JYK04_RS37555 PF00106 short chain dehydrogenase JYK04_RS37570 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS37570 PF00072 Response regulator receiver domain JYK04_RS37575 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS37580 PF01965 DJ-1/PfpI family JYK04_RS37590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS37590 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS37590 PF00989 PAS fold JYK04_RS37595 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK04_RS37610 PF00005 ABC transporter JYK04_RS37610 PF02687 FtsX-like permease family JYK04_RS37610 PF12704 MacB-like periplasmic core domain JYK04_RS37625 PF02687 FtsX-like permease family JYK04_RS37625 PF00005 ABC transporter JYK04_RS37625 PF12704 MacB-like periplasmic core domain JYK04_RS37660 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS37660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYK04_RS37665 PF00795 Carbon-nitrogen hydrolase JYK04_RS37705 PF13847 Methyltransferase domain JYK04_RS37710 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS37725 PF00994 Probable molybdopterin binding domain JYK04_RS37725 PF03454 MoeA C-terminal region (domain IV) JYK04_RS37725 PF03453 MoeA N-terminal region (domain I and II) JYK04_RS37735 PF01209 ubiE/COQ5 methyltransferase family JYK04_RS37740 PF01243 Pyridoxamine 5'-phosphate oxidase JYK04_RS37740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JYK04_RS37745 PF01568 Molydopterin dinucleotide binding domain JYK04_RS37745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYK04_RS37745 PF00384 Molybdopterin oxidoreductase JYK04_RS37780 PF03055 Retinal pigment epithelial membrane protein JYK04_RS37805 PF00857 Isochorismatase family JYK04_RS37810 PF07681 DoxX JYK04_RS37815 PF00561 alpha/beta hydrolase fold JYK04_RS37820 PF07859 alpha/beta hydrolase fold JYK04_RS37825 PF13382 Adenine deaminase C-terminal domain JYK04_RS37825 PF01979 Amidohydrolase family JYK04_RS37840 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS37850 PF04261 Dyp-type peroxidase family JYK04_RS37875 PF00106 short chain dehydrogenase JYK04_RS37880 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS37885 PF01494 FAD binding domain JYK04_RS37915 PF08241 Methyltransferase domain JYK04_RS37920 PF02913 FAD linked oxidases, C-terminal domain JYK04_RS37920 PF01565 FAD binding domain JYK04_RS37925 PF09209 Tetracyclin repressor-like, C-terminal domain JYK04_RS37925 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS37940 PF00106 short chain dehydrogenase JYK04_RS37945 PF11954 Domain of unknown function (DUF3471) JYK04_RS37945 PF00144 Beta-lactamase JYK04_RS37970 PF02653 Branched-chain amino acid transport system / permease component JYK04_RS37975 PF00005 ABC transporter JYK04_RS37980 PF02954 Bacterial regulatory protein, Fis family JYK04_RS37995 PF00698 Acyl transferase domain JYK04_RS37995 PF16197 Ketoacyl-synthetase C-terminal extension JYK04_RS37995 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS37995 PF00550 Phosphopantetheine attachment site JYK04_RS37995 PF08659 KR domain JYK04_RS37995 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS38015 PF13305 Tetracyclin repressor-like, C-terminal domain JYK04_RS38015 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS38025 PF03176 MMPL family JYK04_RS38030 PF16736 Single Cache-like JYK04_RS38030 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS38030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS38030 PF00989 PAS fold JYK04_RS38035 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS38035 PF00072 Response regulator receiver domain JYK04_RS38040 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS38045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK04_RS38045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK04_RS38050 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS38055 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS38055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS38055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS38060 PF00171 Aldehyde dehydrogenase family JYK04_RS38065 PF06114 IrrE N-terminal-like domain JYK04_RS38065 PF01381 Helix-turn-helix JYK04_RS38065 PF09856 Predicted transcriptional regulator (DUF2083) JYK04_RS38070 PF00463 Isocitrate lyase family JYK04_RS38075 PF01274 Malate synthase JYK04_RS38080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK04_RS38080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK04_RS38085 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JYK04_RS38100 PF17874 MalT-like TPR region JYK04_RS38100 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS38135 PF03777 ChpA-C JYK04_RS38140 PF00484 Carbonic anhydrase JYK04_RS38150 PF00553 Cellulose binding domain JYK04_RS38150 PF00041 Fibronectin type III domain JYK04_RS38150 PF02011 Glycosyl hydrolase family 48 JYK04_RS38180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS38180 PF07730 Histidine kinase JYK04_RS38180 PF05231 MASE1 JYK04_RS38185 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS38185 PF00072 Response regulator receiver domain JYK04_RS38235 PF01906 Putative heavy-metal-binding JYK04_RS38245 PF13649 Methyltransferase domain JYK04_RS38260 PF00155 Aminotransferase class I and II JYK04_RS38260 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS38280 PF01047 MarR family JYK04_RS38285 PF07690 Major Facilitator Superfamily JYK04_RS38295 PF07691 PA14 domain JYK04_RS38295 PF02838 Glycosyl hydrolase family 20, domain 2 JYK04_RS38295 PF00728 Glycosyl hydrolase family 20, catalytic domain JYK04_RS38305 PF04231 Endonuclease I JYK04_RS38315 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK04_RS38325 PF16859 Tetracyclin repressor-like, C-terminal domain JYK04_RS38325 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS38340 PF04226 Transglycosylase associated protein JYK04_RS38345 PF03737 Aldolase/RraA JYK04_RS38355 PF00069 Protein kinase domain JYK04_RS38355 PF03793 PASTA domain JYK04_RS38370 PF00701 Dihydrodipicolinate synthetase family JYK04_RS38375 PF03466 LysR substrate binding domain JYK04_RS38375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS38380 PF00107 Zinc-binding dehydrogenase JYK04_RS38380 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS38385 PF00561 alpha/beta hydrolase fold JYK04_RS38390 PF00753 Metallo-beta-lactamase superfamily JYK04_RS38400 PF00378 Enoyl-CoA hydratase/isomerase JYK04_RS38420 PF08240 Alcohol dehydrogenase GroES-like domain JYK04_RS38420 PF00107 Zinc-binding dehydrogenase JYK04_RS38425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS38425 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS38425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS38430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS38430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS38445 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JYK04_RS38445 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JYK04_RS38455 PF00355 Rieske [2Fe-2S] domain JYK04_RS38470 PF00069 Protein kinase domain JYK04_RS38470 PF01011 PQQ enzyme repeat JYK04_RS38470 PF13360 PQQ-like domain JYK04_RS38470 PF13570 PQQ-like domain JYK04_RS38475 PF00069 Protein kinase domain JYK04_RS38475 PF13360 PQQ-like domain JYK04_RS38480 PF13407 Periplasmic binding protein domain JYK04_RS38490 PF06236 Tyrosinase co-factor MelC1 JYK04_RS38495 PF00264 Common central domain of tyrosinase JYK04_RS38500 PF03777 ChpA-C JYK04_RS38510 PF00135 Carboxylesterase family JYK04_RS38515 PF00756 Putative esterase JYK04_RS38545 PF04389 Peptidase family M28 JYK04_RS38545 PF01483 Proprotein convertase P-domain JYK04_RS38550 PF00375 Sodium:dicarboxylate symporter family JYK04_RS38555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS38555 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JYK04_RS38555 PF17203 Single cache domain 3 JYK04_RS38555 PF00989 PAS fold JYK04_RS38560 PF12431 Transcriptional regulator JYK04_RS38560 PF00072 Response regulator receiver domain JYK04_RS38565 PF00264 Common central domain of tyrosinase JYK04_RS38570 PF06236 Tyrosinase co-factor MelC1 JYK04_RS38580 PF13411 MerR HTH family regulatory protein JYK04_RS38585 PF00282 Pyridoxal-dependent decarboxylase conserved domain JYK04_RS38595 PF08281 Sigma-70, region 4 JYK04_RS38595 PF04542 Sigma-70 region 2 JYK04_RS38605 PF09339 IclR helix-turn-helix domain JYK04_RS38605 PF01614 Bacterial transcriptional regulator JYK04_RS38610 PF01081 KDPG and KHG aldolase JYK04_RS38625 PF00041 Fibronectin type III domain JYK04_RS38625 PF00553 Cellulose binding domain JYK04_RS38625 PF00704 Glycosyl hydrolases family 18 JYK04_RS38655 PF00356 Bacterial regulatory proteins, lacI family JYK04_RS38660 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JYK04_RS38660 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JYK04_RS38665 PF10509 Galactokinase galactose-binding signature JYK04_RS38665 PF08544 GHMP kinases C terminal JYK04_RS38665 PF00288 GHMP kinases N terminal domain JYK04_RS38685 PF00248 Aldo/keto reductase family JYK04_RS38695 PF00005 ABC transporter JYK04_RS38700 PF04679 ATP dependent DNA ligase C terminal region JYK04_RS38700 PF01068 ATP dependent DNA ligase domain JYK04_RS38705 PF01544 CorA-like Mg2+ transporter protein JYK04_RS38730 PF05199 GMC oxidoreductase JYK04_RS38730 PF00732 GMC oxidoreductase JYK04_RS38740 PF07690 Major Facilitator Superfamily JYK04_RS38745 PF05922 Peptidase inhibitor I9 JYK04_RS38745 PF00082 Subtilase family JYK04_RS38745 PF05922 Peptidase inhibitor I9 JYK04_RS38745 PF00082 Subtilase family JYK04_RS38760 PF00067 Cytochrome P450 JYK04_RS38770 PF02447 GntP family permease JYK04_RS38785 PF04542 Sigma-70 region 2 JYK04_RS38785 PF12680 SnoaL-like domain JYK04_RS38785 PF08281 Sigma-70, region 4 JYK04_RS38800 PF00501 AMP-binding enzyme JYK04_RS38800 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS38810 PF00664 ABC transporter transmembrane region JYK04_RS38810 PF00005 ABC transporter JYK04_RS38815 PF00501 AMP-binding enzyme JYK04_RS38815 PF00550 Phosphopantetheine attachment site JYK04_RS38815 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS38850 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS38850 PF00072 Response regulator receiver domain JYK04_RS38855 PF07730 Histidine kinase JYK04_RS38975 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK04_RS38975 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK04_RS38980 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK04_RS38980 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK04_RS38985 PF01799 [2Fe-2S] binding domain JYK04_RS38985 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK04_RS38990 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK04_RS38990 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK04_RS38995 PF07730 Histidine kinase JYK04_RS39030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK04_RS39030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK04_RS39035 PF12697 Alpha/beta hydrolase family JYK04_RS39050 PF01565 FAD binding domain JYK04_RS39050 PF08031 Berberine and berberine like JYK04_RS39055 PF00067 Cytochrome P450 JYK04_RS39065 PF01209 ubiE/COQ5 methyltransferase family JYK04_RS39070 PF06276 Ferric iron reductase FhuF-like transporter JYK04_RS39070 PF04183 IucA / IucC family JYK04_RS39075 PF06276 Ferric iron reductase FhuF-like transporter JYK04_RS39075 PF04183 IucA / IucC family JYK04_RS39080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JYK04_RS39130 PF01047 MarR family JYK04_RS39135 PF00392 Bacterial regulatory proteins, gntR family JYK04_RS39135 PF07702 UTRA domain JYK04_RS39140 PF00005 ABC transporter JYK04_RS39140 PF00571 CBS domain JYK04_RS39145 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS39150 PF03176 MMPL family JYK04_RS39155 PF05384 Sensor protein DegS JYK04_RS39155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS39155 PF07730 Histidine kinase JYK04_RS39160 PF00072 Response regulator receiver domain JYK04_RS39160 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS39175 PF00296 Luciferase-like monooxygenase JYK04_RS39205 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYK04_RS39205 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYK04_RS39210 PF01197 Ribosomal protein L31 JYK04_RS39215 PF00471 Ribosomal protein L33 JYK04_RS39225 PF07690 Major Facilitator Superfamily JYK04_RS39260 PF14226 non-haem dioxygenase in morphine synthesis N-terminal JYK04_RS39260 PF03171 2OG-Fe(II) oxygenase superfamily JYK04_RS39280 PF12796 Ankyrin repeats (3 copies) JYK04_RS39310 PF07728 AAA domain (dynein-related subfamily) JYK04_RS39335 PF00561 alpha/beta hydrolase fold JYK04_RS39350 PF00135 Carboxylesterase family JYK04_RS39370 PF02797 Chalcone and stilbene synthases, C-terminal domain JYK04_RS39370 PF00195 Chalcone and stilbene synthases, N-terminal domain JYK04_RS39380 PF14791 DNA polymerase beta thumb JYK04_RS39380 PF14716 Helix-hairpin-helix domain JYK04_RS39380 PF02811 PHP domain JYK04_RS39385 PF01047 MarR family JYK04_RS39390 PF02566 OsmC-like protein JYK04_RS39395 PF01494 FAD binding domain JYK04_RS39415 PF07943 Penicillin-binding protein 5, C-terminal domain JYK04_RS39415 PF00768 D-alanyl-D-alanine carboxypeptidase JYK04_RS39435 PF02567 Phenazine biosynthesis-like protein JYK04_RS39445 PF00583 Acetyltransferase (GNAT) family JYK04_RS39465 PF00144 Beta-lactamase JYK04_RS39470 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS39470 PF00501 AMP-binding enzyme JYK04_RS39475 PF08241 Methyltransferase domain JYK04_RS39490 PF02560 Cyanate lyase C-terminal domain JYK04_RS39495 PF00484 Carbonic anhydrase JYK04_RS39500 PF03466 LysR substrate binding domain JYK04_RS39500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS39510 PF01339 CheB methylesterase JYK04_RS39510 PF00072 Response regulator receiver domain JYK04_RS39520 PF00171 Aldehyde dehydrogenase family JYK04_RS39530 PF04389 Peptidase family M28 JYK04_RS39530 PF01447 Thermolysin metallopeptidase, catalytic domain JYK04_RS39530 PF02868 Thermolysin metallopeptidase, alpha-helical domain JYK04_RS39535 PF03466 LysR substrate binding domain JYK04_RS39535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS39540 PF13649 Methyltransferase domain JYK04_RS39560 PF00144 Beta-lactamase JYK04_RS39575 PF08281 Sigma-70, region 4 JYK04_RS39575 PF04542 Sigma-70 region 2 JYK04_RS39585 PF00313 'Cold-shock' DNA-binding domain JYK04_RS39590 PF00144 Beta-lactamase JYK04_RS39600 PF00376 MerR family regulatory protein JYK04_RS39600 PF09278 MerR, DNA binding JYK04_RS39605 PF00075 RNase H JYK04_RS39625 PF00400 WD domain, G-beta repeat JYK04_RS39625 PF00069 Protein kinase domain JYK04_RS39630 PF13360 PQQ-like domain JYK04_RS39630 PF00069 Protein kinase domain JYK04_RS39630 PF01011 PQQ enzyme repeat JYK04_RS39630 PF13570 PQQ-like domain JYK04_RS39635 PF01300 Telomere recombination JYK04_RS39640 PF10946 Protein of unknown function DUF2625 JYK04_RS39645 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS39645 PF13581 Histidine kinase-like ATPase domain JYK04_RS39645 PF08448 PAS fold JYK04_RS39645 PF13466 STAS domain JYK04_RS39655 PF13649 Methyltransferase domain JYK04_RS39675 PF01979 Amidohydrolase family JYK04_RS39695 PF00561 alpha/beta hydrolase fold JYK04_RS39700 PF00067 Cytochrome P450 JYK04_RS39705 PF16715 Cyclodipeptide synthase JYK04_RS39710 PF00144 Beta-lactamase JYK04_RS39730 PF00672 HAMP domain JYK04_RS39730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS39730 PF00512 His Kinase A (phospho-acceptor) domain JYK04_RS39735 PF00072 Response regulator receiver domain JYK04_RS39735 PF00486 Transcriptional regulatory protein, C terminal JYK04_RS39740 PF00083 Sugar (and other) transporter JYK04_RS39745 PF02333 Phytase JYK04_RS39755 PF00135 Carboxylesterase family JYK04_RS39765 PF02653 Branched-chain amino acid transport system / permease component JYK04_RS39775 PF00005 ABC transporter JYK04_RS39775 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK04_RS39780 PF00005 ABC transporter JYK04_RS39785 PF01894 Uncharacterised protein family UPF0047 JYK04_RS39795 PF12146 Serine aminopeptidase, S33 JYK04_RS39800 PF00141 Peroxidase JYK04_RS39810 PF00501 AMP-binding enzyme JYK04_RS39810 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS39810 PF00668 Condensation domain JYK04_RS39810 PF00550 Phosphopantetheine attachment site JYK04_RS39815 PF01433 Peptidase family M1 domain JYK04_RS39815 PF11838 ERAP1-like C-terminal domain JYK04_RS39820 PF07730 Histidine kinase JYK04_RS39820 PF05231 MASE1 JYK04_RS39820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS39835 PF00069 Protein kinase domain JYK04_RS39835 PF00400 WD domain, G-beta repeat JYK04_RS39855 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JYK04_RS39855 PF17203 Single cache domain 3 JYK04_RS39855 PF00989 PAS fold JYK04_RS39855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK04_RS39915 PF00067 Cytochrome P450 JYK04_RS39920 PF07228 Stage II sporulation protein E (SpoIIE) JYK04_RS39920 PF13466 STAS domain JYK04_RS39920 PF08448 PAS fold JYK04_RS39920 PF13581 Histidine kinase-like ATPase domain JYK04_RS39925 PF03816 Cell envelope-related transcriptional attenuator domain JYK04_RS39945 PF00753 Metallo-beta-lactamase superfamily JYK04_RS39955 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS39955 PF13977 BetI-type transcriptional repressor, C-terminal JYK04_RS39960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK04_RS39960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK04_RS39965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS39965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS39965 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS39970 PF02770 Acyl-CoA dehydrogenase, middle domain JYK04_RS39970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK04_RS39970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK04_RS39975 PF13607 Succinyl-CoA ligase like flavodoxin domain JYK04_RS39975 PF00583 Acetyltransferase (GNAT) family JYK04_RS39975 PF13380 CoA binding domain JYK04_RS39985 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JYK04_RS39985 PF10531 SLBB domain JYK04_RS39985 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYK04_RS39995 PF00355 Rieske [2Fe-2S] domain JYK04_RS39995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYK04_RS40005 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS40010 PF00528 Binding-protein-dependent transport system inner membrane component JYK04_RS40015 PF00005 ABC transporter JYK04_RS40015 PF08402 TOBE domain JYK04_RS40020 PF01593 Flavin containing amine oxidoreductase JYK04_RS40025 PF00171 Aldehyde dehydrogenase family JYK04_RS40030 PF00248 Aldo/keto reductase family JYK04_RS40035 PF17926 Tetracyclin repressor-like, C-terminal domain JYK04_RS40035 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS40045 PF00561 alpha/beta hydrolase fold JYK04_RS40075 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JYK04_RS40075 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JYK04_RS40085 PF01494 FAD binding domain JYK04_RS40090 PF17990 L-Lysine epsilon oxidase N-terminal JYK04_RS40090 PF18417 L-lysine epsilon oxidase C-terminal domain JYK04_RS40095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JYK04_RS40095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JYK04_RS40105 PF13193 AMP-binding enzyme C-terminal domain JYK04_RS40105 PF00501 AMP-binding enzyme JYK04_RS40140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK04_RS40140 PF03466 LysR substrate binding domain JYK04_RS40150 PF00144 Beta-lactamase JYK04_RS40155 PF00535 Glycosyl transferase family 2 JYK04_RS40185 PF00072 Response regulator receiver domain JYK04_RS40185 PF00196 Bacterial regulatory proteins, luxR family JYK04_RS40190 PF00561 alpha/beta hydrolase fold JYK04_RS40250 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JYK04_RS40250 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JYK04_RS40255 PF00248 Aldo/keto reductase family JYK04_RS40270 PF00106 short chain dehydrogenase JYK04_RS40290 PF01494 FAD binding domain JYK04_RS40295 PF00348 Polyprenyl synthetase JYK04_RS40305 PF00082 Subtilase family JYK04_RS40370 PF13977 BetI-type transcriptional repressor, C-terminal JYK04_RS40370 PF00440 Bacterial regulatory proteins, tetR family JYK04_RS40375 PF12697 Alpha/beta hydrolase family JYK04_RS40435 PF00884 Sulfatase JYK04_RS40465 PF00293 NUDIX domain JYK04_RS40475 PF00561 alpha/beta hydrolase fold JYK04_RS40490 PF02585 GlcNAc-PI de-N-acetylase JYK04_RS40535 PF00561 alpha/beta hydrolase fold JYK04_RS40605 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK04_RS40715 PF02502 Ribose/Galactose Isomerase JYK04_RS40730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYK04_RS40805 PF07690 Major Facilitator Superfamily JYK04_RS40830 PF06722 Protein of unknown function (DUF1205)