BC342_RS00080	SM00421	helix_turn_helix, Lux Regulon
BC342_RS00085	SM01209	BC342_RS00085
BC342_RS00090	SM00923	MbtH-like protein
BC342_RS00100	SM00421	helix_turn_helix, Lux Regulon
BC342_RS00105	SM00421	helix_turn_helix, Lux Regulon
BC342_RS00135	SM00823	Phosphopantetheine attachment site
BC342_RS00180	SM00823	Phosphopantetheine attachment site
BC342_RS00180	SM00824	Thioesterase
BC342_RS00185	SM00823	Phosphopantetheine attachment site
BC342_RS00195	SM00822	BC342_RS00195
BC342_RS00195	SM00823	Phosphopantetheine attachment site
BC342_RS00195	SM00825	Beta-ketoacyl synthase
BC342_RS00195	SM00826	BC342_RS00195
BC342_RS00195	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS00195	SM00829	Enoylreductase
BC342_RS00195	SM01294	BC342_RS00195
BC342_RS00200	SM00822	BC342_RS00200
BC342_RS00200	SM00823	Phosphopantetheine attachment site
BC342_RS00200	SM00825	Beta-ketoacyl synthase
BC342_RS00200	SM00826	BC342_RS00200
BC342_RS00200	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS00200	SM00829	Enoylreductase
BC342_RS00200	SM01294	BC342_RS00200
BC342_RS00245	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS00265	SM00382	ATPases associated with a variety of cellular activities
BC342_RS00290	SM00382	ATPases associated with a variety of cellular activities
BC342_RS00320	SM00560	LamG-like jellyroll fold domain
BC342_RS00320	SM00758	BC342_RS00320
BC342_RS00340	SM00382	ATPases associated with a variety of cellular activities
BC342_RS00350	SM00354	helix_turn _helix lactose operon repressor
BC342_RS00390	SM00100	Cyclic nucleotide-monophosphate binding domain
BC342_RS00405	SM00822	BC342_RS00405
BC342_RS00415	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS00425	SM00855	Phosphoglycerate mutase family
BC342_RS00430	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS00480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS00515	SM00867	YceI-like domain 
BC342_RS00520	SM00054	EF-hand, calcium binding motif
BC342_RS00530	SM00382	ATPases associated with a variety of cellular activities
BC342_RS00550	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS00605	SM00344	helix_turn_helix ASNC type
BC342_RS00620	SM00822	BC342_RS00620
BC342_RS00655	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS00670	SM00357	Cold shock protein domain
BC342_RS00685	SM00822	BC342_RS00685
BC342_RS00725	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS00795	SM00458	Ricin-type beta-trefoil
BC342_RS00805	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS00835	SM00420	helix_turn_helix, Deoxyribose operon repressor
BC342_RS00835	SM01134	BC342_RS00835
BC342_RS00855	SM01007	Class II Aldolase and Adducin N-terminal domain
BC342_RS00875	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BC342_RS00905	SM00854	Bacterial capsule synthesis protein PGA_cap
BC342_RS00910	SM00382	ATPases associated with a variety of cellular activities
BC342_RS00920	SM00062	Bacterial periplasmic substrate-binding proteins
BC342_RS00930	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS00935	SM00822	BC342_RS00935
BC342_RS00985	SM00382	ATPases associated with a variety of cellular activities
BC342_RS00990	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01040	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01045	SM00327	von Willebrand factor (vWF) type A domain
BC342_RS01055	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS01105	SM00829	Enoylreductase
BC342_RS01125	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01130	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01155	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS01165	SM01130	BC342_RS01165
BC342_RS01185	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01205	SM00091	PAS domain
BC342_RS01205	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS01210	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS01210	SM00749	bacterial OsmY and nodulation domain
BC342_RS01240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS01240	SM00387	Histidine kinase-like ATPases
BC342_RS01240	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS01245	SM00448	cheY-homologous receiver domain
BC342_RS01245	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS01270	SM01266	BC342_RS01270
BC342_RS01290	SM00387	Histidine kinase-like ATPases
BC342_RS01300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS01300	SM00387	Histidine kinase-like ATPases
BC342_RS01300	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS01305	SM00448	cheY-homologous receiver domain
BC342_RS01305	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS01330	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS01335	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BC342_RS01375	SM00354	helix_turn _helix lactose operon repressor
BC342_RS01395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS01395	SM00895	BC342_RS01395
BC342_RS01400	SM00849	Metallo-beta-lactamase superfamily
BC342_RS01410	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS01500	SM00960	Roadblock/LC7 domain
BC342_RS01520	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS01540	SM00895	BC342_RS01540
BC342_RS01555	SM00710	Parallel beta-helix repeats
BC342_RS01555	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BC342_RS01580	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS01580	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS01665	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01675	SM00387	Histidine kinase-like ATPases
BC342_RS01680	SM00421	helix_turn_helix, Lux Regulon
BC342_RS01680	SM00448	cheY-homologous receiver domain
BC342_RS01690	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS01695	SM01012	BC342_RS01695
BC342_RS01710	SM00822	BC342_RS01710
BC342_RS01720	SM00354	helix_turn _helix lactose operon repressor
BC342_RS01765	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01785	SM00382	ATPases associated with a variety of cellular activities
BC342_RS01845	SM00822	BC342_RS01845
BC342_RS01960	SM01060	BC342_RS01960
BC342_RS01970	SM00829	Enoylreductase
BC342_RS02010	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS02010	SM00091	PAS domain
BC342_RS02010	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS02075	SM01012	BC342_RS02075
BC342_RS02085	SM00642	Alpha-amylase domain
BC342_RS02105	SM00642	Alpha-amylase domain
BC342_RS02115	SM00642	Alpha-amylase domain
BC342_RS02150	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS02150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS02150	SM00387	Histidine kinase-like ATPases
BC342_RS02150	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS02150	SM00448	cheY-homologous receiver domain
BC342_RS02175	SM00387	Histidine kinase-like ATPases
BC342_RS02180	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS02185	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS02235	SM00100	Cyclic nucleotide-monophosphate binding domain
BC342_RS02280	SM00849	Metallo-beta-lactamase superfamily
BC342_RS02295	SM00448	cheY-homologous receiver domain
BC342_RS02300	SM00387	Histidine kinase-like ATPases
BC342_RS02310	SM00421	helix_turn_helix, Lux Regulon
BC342_RS02330	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS02385	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS02445	SM00495	Chitin-binding domain type 3
BC342_RS02490	SM00644	BC342_RS02490
BC342_RS02570	SM00244	prohibitin homologues
BC342_RS02585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS02585	SM00895	BC342_RS02585
BC342_RS02660	SM00872	Alpha mannosidase, middle domain
BC342_RS02675	SM00382	ATPases associated with a variety of cellular activities
BC342_RS02770	SM01120	BC342_RS02770
BC342_RS02785	SM00060	Fibronectin type 3 domain
BC342_RS02815	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS02840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS02860	SM00382	ATPases associated with a variety of cellular activities
BC342_RS02895	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS02910	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BC342_RS02925	SM01130	BC342_RS02925
BC342_RS02940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS02940	SM00895	BC342_RS02940
BC342_RS02960	SM00382	ATPases associated with a variety of cellular activities
BC342_RS02970	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
BC342_RS02970	SM00710	Parallel beta-helix repeats
BC342_RS02995	SM01217	BC342_RS02995
BC342_RS03015	SM00354	helix_turn _helix lactose operon repressor
BC342_RS03075	SM00420	helix_turn_helix, Deoxyribose operon repressor
BC342_RS03075	SM01134	BC342_RS03075
BC342_RS03135	SM00420	helix_turn_helix, Deoxyribose operon repressor
BC342_RS03135	SM01134	BC342_RS03135
BC342_RS03140	SM00014	Acid phosphatase homologues
BC342_RS03195	SM00421	helix_turn_helix, Lux Regulon
BC342_RS03195	SM00448	cheY-homologous receiver domain
BC342_RS03230	SM00354	helix_turn _helix lactose operon repressor
BC342_RS03245	SM00893	Electron transfer flavoprotein domain
BC342_RS03250	SM00893	Electron transfer flavoprotein domain
BC342_RS03265	SM00563	Phosphate acyltransferases
BC342_RS03305	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS03315	SM00822	BC342_RS03315
BC342_RS03320	SM00822	BC342_RS03320
BC342_RS03345	SM00882	Coenzyme A transferase
BC342_RS03350	SM00882	Coenzyme A transferase
BC342_RS03355	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS03375	SM00014	Acid phosphatase homologues
BC342_RS03435	SM00382	ATPases associated with a variety of cellular activities
BC342_RS03450	SM00986	Uracil DNA glycosylase superfamily
BC342_RS03450	SM00987	UreE urease accessory protein, C-terminal domain 
BC342_RS03475	SM00344	helix_turn_helix ASNC type
BC342_RS03510	SM00822	BC342_RS03510
BC342_RS03535	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BC342_RS03540	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BC342_RS03555	SM00448	cheY-homologous receiver domain
BC342_RS03560	SM00387	Histidine kinase-like ATPases
BC342_RS03600	SM00382	ATPases associated with a variety of cellular activities
BC342_RS03605	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS03620	SM00382	ATPases associated with a variety of cellular activities
BC342_RS03640	SM00487	DEAD-like helicases superfamily
BC342_RS03640	SM00490	helicase superfamily c-terminal domain
BC342_RS03655	SM00960	Roadblock/LC7 domain
BC342_RS03705	SM00487	DEAD-like helicases superfamily
BC342_RS03705	SM00490	helicase superfamily c-terminal domain
BC342_RS03730	SM00644	BC342_RS03730
BC342_RS03750	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS03755	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS03780	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BC342_RS03780	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BC342_RS03785	SM00344	helix_turn_helix ASNC type
BC342_RS03790	SM00422	helix_turn_helix, mercury resistance
BC342_RS03805	SM00458	Ricin-type beta-trefoil
BC342_RS03805	SM00633	Glycosyl hydrolase family 10
BC342_RS03810	SM00354	helix_turn _helix lactose operon repressor
BC342_RS03830	SM01217	BC342_RS03830
BC342_RS03840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS03840	SM00895	BC342_RS03840
BC342_RS03860	SM00354	helix_turn _helix lactose operon repressor
BC342_RS03870	SM00637	BC342_RS03870
BC342_RS03885	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS03915	SM00829	Enoylreductase
BC342_RS03920	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS04000	SM00387	Histidine kinase-like ATPases
BC342_RS04015	SM00448	cheY-homologous receiver domain
BC342_RS04015	SM00850	LytTr DNA-binding domain
BC342_RS04020	SM00344	helix_turn_helix ASNC type
BC342_RS04045	SM00563	Phosphate acyltransferases
BC342_RS04085	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS04100	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS04100	SM00876	Biotin and Thiamin Synthesis associated domain
BC342_RS04135	SM01091	Transporter associated domain
BC342_RS04140	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS04150	SM00998	Adenylosuccinate lyase C-terminus
BC342_RS04155	SM00986	Uracil DNA glycosylase superfamily
BC342_RS04155	SM00987	UreE urease accessory protein, C-terminal domain 
BC342_RS04170	SM00382	ATPases associated with a variety of cellular activities
BC342_RS04180	SM00421	helix_turn_helix, Lux Regulon
BC342_RS04180	SM00448	cheY-homologous receiver domain
BC342_RS04190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS04190	SM00866	BC342_RS04190
BC342_RS04255	SM00903	Flavin reductase like domain
BC342_RS04330	SM00155	Phospholipase D. Active site motifs.
BC342_RS04340	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS04345	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS04355	SM00881	CoA binding domain
BC342_RS04365	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS04435	SM00849	Metallo-beta-lactamase superfamily
BC342_RS04440	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS04475	SM00986	Uracil DNA glycosylase superfamily
BC342_RS04475	SM00987	UreE urease accessory protein, C-terminal domain 
BC342_RS04490	SM00822	BC342_RS04490
BC342_RS04510	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS04530	SM00823	Phosphopantetheine attachment site
BC342_RS04530	SM00824	Thioesterase
BC342_RS04665	SM00422	helix_turn_helix, mercury resistance
BC342_RS04675	SM00422	helix_turn_helix, mercury resistance
BC342_RS04680	SM00240	Forkhead associated domain
BC342_RS04775	SM00960	Roadblock/LC7 domain
BC342_RS04780	SM00387	Histidine kinase-like ATPases
BC342_RS04800	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS04805	SM00829	Enoylreductase
BC342_RS04840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS04840	SM00895	BC342_RS04840
BC342_RS04865	SM00248	ankyrin repeats
BC342_RS04880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS04920	SM00344	helix_turn_helix ASNC type
BC342_RS04940	SM00636	BC342_RS04940
BC342_RS04960	SM00382	ATPases associated with a variety of cellular activities
BC342_RS04965	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS04970	SM01091	Transporter associated domain
BC342_RS05095	SM00344	helix_turn_helix ASNC type
BC342_RS05105	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS05105	SM01240	BC342_RS05105
BC342_RS05135	SM00327	von Willebrand factor (vWF) type A domain
BC342_RS05140	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS05185	SM01409	BC342_RS05185
BC342_RS05190	SM00072	Guanylate kinase homologues.
BC342_RS05200	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BC342_RS05210	SM00851	MGS-like domain
BC342_RS05210	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BC342_RS05215	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BC342_RS05240	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS05250	SM00841	Elongation factor P, C-terminal
BC342_RS05250	SM01185	BC342_RS05250
BC342_RS05285	SM00732	Likely ribonuclease with RNase H fold.
BC342_RS05290	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BC342_RS05310	SM00363	S4 RNA-binding domain
BC342_RS05310	SM01390	BC342_RS05310
BC342_RS05315	SM00382	ATPases associated with a variety of cellular activities
BC342_RS05320	SM00756	BC342_RS05320
BC342_RS05330	SM00849	Metallo-beta-lactamase superfamily
BC342_RS05345	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BC342_RS05345	SM00954	Region found in RelA / SpoT proteins
BC342_RS05365	SM01323	BC342_RS05365
BC342_RS05370	SM00382	ATPases associated with a variety of cellular activities
BC342_RS05375	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BC342_RS05425	SM00838	Elongation factor G C-terminus
BC342_RS05425	SM00889	Elongation factor G, domain IV
BC342_RS05440	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BC342_RS05445	SM00479	BC342_RS05445
BC342_RS05570	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS05610	SM00382	ATPases associated with a variety of cellular activities
BC342_RS05610	SM00930	BC342_RS05610
BC342_RS05645	SM00563	Phosphate acyltransferases
BC342_RS05685	SM00900	BC342_RS05685
BC342_RS05715	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BC342_RS05730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS05755	SM00382	ATPases associated with a variety of cellular activities
BC342_RS05775	SM00873	B3/4 domain
BC342_RS05775	SM00874	tRNA synthetase B5 domain
BC342_RS05775	SM00896	Ferredoxin-fold anticodon binding domain
BC342_RS05785	SM00387	Histidine kinase-like ATPases
BC342_RS05785	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS05790	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BC342_RS05855	SM01230	BC342_RS05855
BC342_RS05860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS05860	SM00895	BC342_RS05860
BC342_RS05885	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS05895	SM00382	ATPases associated with a variety of cellular activities
BC342_RS05900	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BC342_RS05900	SM00475	5'-3' exonuclease
BC342_RS05935	SM00960	Roadblock/LC7 domain
BC342_RS05940	SM00387	Histidine kinase-like ATPases
BC342_RS05945	SM00487	DEAD-like helicases superfamily
BC342_RS05945	SM00490	helicase superfamily c-terminal domain
BC342_RS05945	SM01142	BC342_RS05945
BC342_RS06025	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06045	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS06055	SM00421	helix_turn_helix, Lux Regulon
BC342_RS06055	SM00448	cheY-homologous receiver domain
BC342_RS06070	SM01018	B12 binding domain
BC342_RS06080	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS06120	SM00855	Phosphoglycerate mutase family
BC342_RS06185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS06185	SM00895	BC342_RS06185
BC342_RS06200	SM00822	BC342_RS06200
BC342_RS06280	SM00422	helix_turn_helix, mercury resistance
BC342_RS06310	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS06315	SM00829	Enoylreductase
BC342_RS06335	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BC342_RS06355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS06355	SM00866	BC342_RS06355
BC342_RS06370	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06405	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS06475	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06490	SM00062	Bacterial periplasmic substrate-binding proteins
BC342_RS06520	SM00014	Acid phosphatase homologues
BC342_RS06545	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06550	SM00563	Phosphate acyltransferases
BC342_RS06580	SM00363	S4 RNA-binding domain
BC342_RS06605	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BC342_RS06605	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BC342_RS06610	SM00028	Tetratricopeptide repeats
BC342_RS06650	SM00363	S4 RNA-binding domain
BC342_RS06665	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06730	SM00507	HNH nucleases
BC342_RS06735	SM00244	prohibitin homologues
BC342_RS06745	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06760	SM00421	helix_turn_helix, Lux Regulon
BC342_RS06760	SM00448	cheY-homologous receiver domain
BC342_RS06765	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS06765	SM00387	Histidine kinase-like ATPases
BC342_RS06785	SM00240	Forkhead associated domain
BC342_RS06785	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06795	SM00855	Phosphoglycerate mutase family
BC342_RS06810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS06810	SM00895	BC342_RS06810
BC342_RS06820	SM00822	BC342_RS06820
BC342_RS06830	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS06850	SM00363	S4 RNA-binding domain
BC342_RS06870	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS06895	SM00292	breast cancer carboxy-terminal domain
BC342_RS06895	SM00479	BC342_RS06895
BC342_RS06915	SM00822	BC342_RS06915
BC342_RS06955	SM00382	ATPases associated with a variety of cellular activities
BC342_RS06970	SM01007	Class II Aldolase and Adducin N-terminal domain
BC342_RS06995	SM00327	von Willebrand factor (vWF) type A domain
BC342_RS06995	SM00382	ATPases associated with a variety of cellular activities
BC342_RS07080	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS07105	SM00656	BC342_RS07105
BC342_RS07145	SM01130	BC342_RS07145
BC342_RS07150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS07150	SM00895	BC342_RS07150
BC342_RS07155	SM00829	Enoylreductase
BC342_RS07160	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS07170	SM01130	BC342_RS07170
BC342_RS07180	SM00420	helix_turn_helix, Deoxyribose operon repressor
BC342_RS07180	SM01134	BC342_RS07180
BC342_RS07200	SM00829	Enoylreductase
BC342_RS07230	SM00448	cheY-homologous receiver domain
BC342_RS07230	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS07235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS07235	SM00387	Histidine kinase-like ATPases
BC342_RS07235	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS07300	SM00382	ATPases associated with a variety of cellular activities
BC342_RS07330	SM00382	ATPases associated with a variety of cellular activities
BC342_RS07365	SM00861	Transketolase, pyrimidine binding domain
BC342_RS07415	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BC342_RS07435	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BC342_RS07435	SM00465	GIY-YIG type nucleases (URI domain)
BC342_RS07450	SM00354	helix_turn _helix lactose operon repressor
BC342_RS07470	SM00849	Metallo-beta-lactamase superfamily
BC342_RS07500	SM00487	DEAD-like helicases superfamily
BC342_RS07500	SM00490	helicase superfamily c-terminal domain
BC342_RS07565	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS07620	SM00849	Metallo-beta-lactamase superfamily
BC342_RS07635	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS07660	SM00986	Uracil DNA glycosylase superfamily
BC342_RS07660	SM00987	UreE urease accessory protein, C-terminal domain 
BC342_RS07665	SM00363	S4 RNA-binding domain
BC342_RS07675	SM00028	Tetratricopeptide repeats
BC342_RS07690	SM00316	Ribosomal protein S1-like RNA-binding domain
BC342_RS07715	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BC342_RS07715	SM00474	3'-5' exonuclease
BC342_RS07715	SM00475	5'-3' exonuclease
BC342_RS07715	SM00482	DNA polymerase A domain
BC342_RS07745	SM00382	ATPases associated with a variety of cellular activities
BC342_RS07750	SM00382	ATPases associated with a variety of cellular activities
BC342_RS07755	SM00448	cheY-homologous receiver domain
BC342_RS07755	SM01012	BC342_RS07755
BC342_RS07790	SM00830	Chorismate mutase type II
BC342_RS07805	SM00327	von Willebrand factor (vWF) type A domain
BC342_RS07970	SM00464	Found in ATP-dependent protease La (LON)
BC342_RS07990	SM00382	ATPases associated with a variety of cellular activities
BC342_RS08000	SM00481	DNA polymerase alpha chain like domain
BC342_RS08140	SM00947	Carbonic anhydrase
BC342_RS08155	SM00460	Transglutaminase/protease-like homologues
BC342_RS08225	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS08225	SM00740	BC342_RS08225
BC342_RS08230	SM00518	AP endonuclease family 2
BC342_RS08270	SM00421	helix_turn_helix, Lux Regulon
BC342_RS08270	SM00448	cheY-homologous receiver domain
BC342_RS08275	SM00387	Histidine kinase-like ATPases
BC342_RS08455	SM00028	Tetratricopeptide repeats
BC342_RS08480	SM00421	helix_turn_helix, Lux Regulon
BC342_RS08480	SM00448	cheY-homologous receiver domain
BC342_RS08510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BC342_RS08560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS08560	SM00895	BC342_RS08560
BC342_RS08580	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
BC342_RS08610	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS08625	SM00822	BC342_RS08625
BC342_RS08645	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS08665	SM01230	BC342_RS08665
BC342_RS08710	SM01230	BC342_RS08710
BC342_RS08715	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS08720	SM00387	Histidine kinase-like ATPases
BC342_RS08725	SM00421	helix_turn_helix, Lux Regulon
BC342_RS08725	SM00448	cheY-homologous receiver domain
BC342_RS08765	SM00632	BC342_RS08765
BC342_RS08765	SM00642	Alpha-amylase domain
BC342_RS08790	SM00354	helix_turn _helix lactose operon repressor
BC342_RS08835	SM01230	BC342_RS08835
BC342_RS08885	SM00320	WD40 repeats
BC342_RS08915	SM00382	ATPases associated with a variety of cellular activities
BC342_RS08925	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS08925	SM01043	Bacterial transcriptional activator domain
BC342_RS08990	SM00382	ATPases associated with a variety of cellular activities
BC342_RS09000	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BC342_RS09015	SM00421	helix_turn_helix, Lux Regulon
BC342_RS09015	SM00448	cheY-homologous receiver domain
BC342_RS09065	SM00637	BC342_RS09065
BC342_RS09070	SM00637	BC342_RS09070
BC342_RS09110	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS09140	SM00421	helix_turn_helix, Lux Regulon
BC342_RS09140	SM00448	cheY-homologous receiver domain
BC342_RS09145	SM00387	Histidine kinase-like ATPases
BC342_RS09185	SM00421	helix_turn_helix, Lux Regulon
BC342_RS09220	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS09220	SM01043	Bacterial transcriptional activator domain
BC342_RS09260	SM00422	helix_turn_helix, mercury resistance
BC342_RS09280	SM00855	Phosphoglycerate mutase family
BC342_RS09310	SM00421	helix_turn_helix, Lux Regulon
BC342_RS09310	SM00448	cheY-homologous receiver domain
BC342_RS09330	SM00646	BC342_RS09330
BC342_RS09380	SM00382	ATPases associated with a variety of cellular activities
BC342_RS09390	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS09445	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS09655	SM00422	helix_turn_helix, mercury resistance
BC342_RS09680	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS09695	SM00825	Beta-ketoacyl synthase
BC342_RS09730	SM00829	Enoylreductase
BC342_RS09735	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS09745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS09745	SM00866	BC342_RS09745
BC342_RS09765	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS09770	SM00829	Enoylreductase
BC342_RS09785	SM00382	ATPases associated with a variety of cellular activities
BC342_RS09820	SM01029	Beta-galactosidase, domain 2
BC342_RS09825	SM00813	Alpha-L-arabinofuranosidase C-terminus
BC342_RS09870	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS09880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS09880	SM00895	BC342_RS09880
BC342_RS09910	SM00382	ATPases associated with a variety of cellular activities
BC342_RS09915	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS09915	SM01043	Bacterial transcriptional activator domain
BC342_RS09925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS09935	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS09995	SM00382	ATPases associated with a variety of cellular activities
BC342_RS10005	SM00382	ATPases associated with a variety of cellular activities
BC342_RS10005	SM00710	Parallel beta-helix repeats
BC342_RS10010	SM00458	Ricin-type beta-trefoil
BC342_RS10020	SM00108	Bulb-type mannose-specific lectin
BC342_RS10055	SM00382	ATPases associated with a variety of cellular activities
BC342_RS10060	SM00382	ATPases associated with a variety of cellular activities
BC342_RS10070	SM00400	zinc finger
BC342_RS10070	SM00493	BC342_RS10070
BC342_RS10070	SM00766	DNA primase DnaG DnaB-binding
BC342_RS10080	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BC342_RS10095	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BC342_RS10110	SM00822	BC342_RS10110
BC342_RS10170	SM00894	Excalibur calcium-binding domain
BC342_RS10215	SM00382	ATPases associated with a variety of cellular activities
BC342_RS10245	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS10300	SM00917	LeuA allosteric (dimerisation) domain
BC342_RS10330	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS10330	SM01091	Transporter associated domain
BC342_RS10370	SM00245	tail specific protease
BC342_RS10390	SM00271	DnaJ molecular chaperone homology domain
BC342_RS10400	SM00849	Metallo-beta-lactamase superfamily
BC342_RS10415	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS10420	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS10430	SM00838	Elongation factor G C-terminus
BC342_RS10455	SM00867	YceI-like domain 
BC342_RS10460	SM00849	Metallo-beta-lactamase superfamily
BC342_RS10480	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS10580	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS10680	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BC342_RS10705	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BC342_RS10725	SM00855	Phosphoglycerate mutase family
BC342_RS10770	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BC342_RS10815	SM00316	Ribosomal protein S1-like RNA-binding domain
BC342_RS10830	SM00829	Enoylreductase
BC342_RS10835	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS10865	SM00562	BC342_RS10865
BC342_RS10890	SM00382	ATPases associated with a variety of cellular activities
BC342_RS10890	SM00994	ClpX C4-type zinc finger
BC342_RS10890	SM01086	C-terminal, D2-small domain, of ClpB protein
BC342_RS10940	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS10950	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BC342_RS10950	SM01232	BC342_RS10950
BC342_RS11010	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BC342_RS11025	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS11060	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS11065	SM00507	HNH nucleases
BC342_RS11075	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS11110	SM00062	Bacterial periplasmic substrate-binding proteins
BC342_RS11130	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS11130	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BC342_RS11135	SM00327	von Willebrand factor (vWF) type A domain
BC342_RS11140	SM00240	Forkhead associated domain
BC342_RS11165	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11180	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS11190	SM00866	BC342_RS11190
BC342_RS11205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS11205	SM00866	BC342_RS11205
BC342_RS11240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS11240	SM00866	BC342_RS11240
BC342_RS11285	SM00421	helix_turn_helix, Lux Regulon
BC342_RS11285	SM00448	cheY-homologous receiver domain
BC342_RS11330	SM00422	helix_turn_helix, mercury resistance
BC342_RS11340	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS11390	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11525	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11525	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BC342_RS11550	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11560	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS11580	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11615	SM00886	Stress responsive A/B Barrel Domain
BC342_RS11630	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS11645	SM00354	helix_turn _helix lactose operon repressor
BC342_RS11650	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11685	SM00354	helix_turn _helix lactose operon repressor
BC342_RS11730	SM00448	cheY-homologous receiver domain
BC342_RS11740	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11760	SM00382	ATPases associated with a variety of cellular activities
BC342_RS11795	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS11830	SM00878	Biotin carboxylase C-terminal domain
BC342_RS11860	SM01006	Siderophore biosynthesis protein domain
BC342_RS11895	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS11900	SM00479	BC342_RS11900
BC342_RS11910	SM00354	helix_turn _helix lactose operon repressor
BC342_RS11935	SM00354	helix_turn _helix lactose operon repressor
BC342_RS11945	SM00637	BC342_RS11945
BC342_RS11950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS11950	SM00387	Histidine kinase-like ATPases
BC342_RS11950	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS11955	SM00448	cheY-homologous receiver domain
BC342_RS11955	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS11980	SM00855	Phosphoglycerate mutase family
BC342_RS12085	SM00656	BC342_RS12085
BC342_RS12115	SM00062	Bacterial periplasmic substrate-binding proteins
BC342_RS12130	SM00382	ATPases associated with a variety of cellular activities
BC342_RS12150	SM00244	prohibitin homologues
BC342_RS12230	SM00822	BC342_RS12230
BC342_RS12255	SM00382	ATPases associated with a variety of cellular activities
BC342_RS12280	SM00487	DEAD-like helicases superfamily
BC342_RS12295	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS12305	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS12340	SM00829	Enoylreductase
BC342_RS12415	SM00960	Roadblock/LC7 domain
BC342_RS12490	SM00382	ATPases associated with a variety of cellular activities
BC342_RS12515	SM00883	Chaperonin 10 Kd subunit
BC342_RS12550	SM00867	YceI-like domain 
BC342_RS12570	SM00849	Metallo-beta-lactamase superfamily
BC342_RS12590	SM00232	JAB/MPN domain
BC342_RS12665	SM00344	helix_turn_helix ASNC type
BC342_RS12675	SM00382	ATPases associated with a variety of cellular activities
BC342_RS12705	SM00487	DEAD-like helicases superfamily
BC342_RS12710	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS12720	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BC342_RS12770	SM00411	bacterial (prokaryotic) histone like domain
BC342_RS12775	SM00919	Malic enzyme, NAD binding domain
BC342_RS12775	SM01274	BC342_RS12775
BC342_RS12800	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS12850	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BC342_RS12850	SM00245	tail specific protease
BC342_RS12860	SM00382	ATPases associated with a variety of cellular activities
BC342_RS12875	SM00937	BC342_RS12875
BC342_RS12880	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS12885	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS12935	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS12975	SM00382	ATPases associated with a variety of cellular activities
BC342_RS13005	SM00957	SecA DEAD-like domain
BC342_RS13005	SM00958	SecA preprotein cross-linking domain
BC342_RS13020	SM00421	helix_turn_helix, Lux Regulon
BC342_RS13020	SM00448	cheY-homologous receiver domain
BC342_RS13035	SM00909	Sporulation and spore germination
BC342_RS13040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS13040	SM00387	Histidine kinase-like ATPases
BC342_RS13040	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS13045	SM00448	cheY-homologous receiver domain
BC342_RS13045	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS13115	SM00996	S-adenosyl-L-homocysteine hydrolase
BC342_RS13115	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BC342_RS13205	SM00644	BC342_RS13205
BC342_RS13205	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
BC342_RS13265	SM00984	UDP binding domain
BC342_RS13280	SM01001	AIR carboxylase
BC342_RS13295	SM00387	Histidine kinase-like ATPases
BC342_RS13295	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS13300	SM00448	cheY-homologous receiver domain
BC342_RS13300	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS13410	SM00382	ATPases associated with a variety of cellular activities
BC342_RS13420	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
BC342_RS13445	SM01192	BC342_RS13445
BC342_RS13445	SM01193	BC342_RS13445
BC342_RS13450	SM00257	Lysin motif
BC342_RS13485	SM00487	DEAD-like helicases superfamily
BC342_RS13485	SM00490	helicase superfamily c-terminal domain
BC342_RS13485	SM00982	BC342_RS13485
BC342_RS13485	SM01058	CarD-like/TRCF domain
BC342_RS13495	SM00382	ATPases associated with a variety of cellular activities
BC342_RS13510	SM00860	SMI1 / KNR4 family
BC342_RS13540	SM01400	BC342_RS13540
BC342_RS13585	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS13590	SM00421	helix_turn_helix, Lux Regulon
BC342_RS13590	SM00448	cheY-homologous receiver domain
BC342_RS13600	SM00422	helix_turn_helix, mercury resistance
BC342_RS13615	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS13655	SM00421	helix_turn_helix, Lux Regulon
BC342_RS13665	SM00564	beta-propeller repeat
BC342_RS13670	SM00382	ATPases associated with a variety of cellular activities
BC342_RS13685	SM00650	Ribosomal RNA adenine dimethylases
BC342_RS13690	SM01208	BC342_RS13690
BC342_RS13725	SM00822	BC342_RS13725
BC342_RS13785	SM00382	ATPases associated with a variety of cellular activities
BC342_RS13810	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS13825	SM00245	tail specific protease
BC342_RS13835	SM00822	BC342_RS13835
BC342_RS13850	SM00422	helix_turn_helix, mercury resistance
BC342_RS13885	SM00852	Probable molybdopterin binding domain
BC342_RS13895	SM00852	Probable molybdopterin binding domain
BC342_RS13970	SM00420	helix_turn_helix, Deoxyribose operon repressor
BC342_RS13970	SM01134	BC342_RS13970
BC342_RS14000	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS14040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS14040	SM00387	Histidine kinase-like ATPases
BC342_RS14040	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS14045	SM00448	cheY-homologous receiver domain
BC342_RS14045	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS14050	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS14060	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS14075	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS14120	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS14125	SM00481	DNA polymerase alpha chain like domain
BC342_RS14140	SM00028	Tetratricopeptide repeats
BC342_RS14140	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS14140	SM01043	Bacterial transcriptional activator domain
BC342_RS14155	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS14155	SM00564	beta-propeller repeat
BC342_RS14195	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS14205	SM00054	EF-hand, calcium binding motif
BC342_RS14250	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BC342_RS14255	SM00382	ATPases associated with a variety of cellular activities
BC342_RS14270	SM00529	Helix-turn-helix diphteria tox regulatory element
BC342_RS14270	SM00899	BC342_RS14270
BC342_RS14280	SM00091	PAS domain
BC342_RS14315	SM00878	Biotin carboxylase C-terminal domain
BC342_RS14355	SM00829	Enoylreductase
BC342_RS14370	SM00829	Enoylreductase
BC342_RS14445	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS14455	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS14475	SM00421	helix_turn_helix, Lux Regulon
BC342_RS14475	SM00448	cheY-homologous receiver domain
BC342_RS14525	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS14580	SM00357	Cold shock protein domain
BC342_RS14605	SM00487	DEAD-like helicases superfamily
BC342_RS14605	SM00490	helicase superfamily c-terminal domain
BC342_RS14665	SM00822	BC342_RS14665
BC342_RS14690	SM00357	Cold shock protein domain
BC342_RS14755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS14755	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BC342_RS14755	SM00091	PAS domain
BC342_RS14755	SM00267	diguanylate cyclase
BC342_RS14760	SM00903	Flavin reductase like domain
BC342_RS14790	SM00829	Enoylreductase
BC342_RS14800	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS14815	SM00829	Enoylreductase
BC342_RS14820	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS14825	SM00822	BC342_RS14825
BC342_RS14870	SM00421	helix_turn_helix, Lux Regulon
BC342_RS14875	SM00421	helix_turn_helix, Lux Regulon
BC342_RS14885	SM00382	ATPases associated with a variety of cellular activities
BC342_RS14895	SM00458	Ricin-type beta-trefoil
BC342_RS14900	SM00458	Ricin-type beta-trefoil
BC342_RS14995	SM00382	ATPases associated with a variety of cellular activities
BC342_RS15045	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS15060	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BC342_RS15065	SM00840	BC342_RS15065
BC342_RS15080	SM01058	CarD-like/TRCF domain
BC342_RS15090	SM00448	cheY-homologous receiver domain
BC342_RS15090	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS15095	SM00387	Histidine kinase-like ATPases
BC342_RS15095	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS15110	SM01260	BC342_RS15110
BC342_RS15145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS15170	SM00020	Trypsin-like serine protease
BC342_RS15175	SM00633	Glycosyl hydrolase family 10
BC342_RS15180	SM00829	Enoylreductase
BC342_RS15200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS15200	SM00866	BC342_RS15200
BC342_RS15245	SM00855	Phosphoglycerate mutase family
BC342_RS15260	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS15300	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS15335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS15340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS15385	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS15415	SM00450	Rhodanese Homology Domain
BC342_RS15440	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS15445	SM00354	helix_turn _helix lactose operon repressor
BC342_RS15455	SM00448	cheY-homologous receiver domain
BC342_RS15455	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS15460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS15460	SM00387	Histidine kinase-like ATPases
BC342_RS15460	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS15510	SM00880	BC342_RS15510
BC342_RS15530	SM00382	ATPases associated with a variety of cellular activities
BC342_RS15560	SM00014	Acid phosphatase homologues
BC342_RS15605	SM00387	Histidine kinase-like ATPases
BC342_RS15610	SM00421	helix_turn_helix, Lux Regulon
BC342_RS15610	SM00448	cheY-homologous receiver domain
BC342_RS15635	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS15645	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS15660	SM00776	BC342_RS15660
BC342_RS15665	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS15665	SM01043	Bacterial transcriptional activator domain
BC342_RS15705	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS15720	SM00487	DEAD-like helicases superfamily
BC342_RS15720	SM00490	helicase superfamily c-terminal domain
BC342_RS15750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS15800	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS15815	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS15830	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS15865	SM00487	DEAD-like helicases superfamily
BC342_RS15865	SM00490	helicase superfamily c-terminal domain
BC342_RS15900	SM00421	helix_turn_helix, Lux Regulon
BC342_RS15910	SM01133	BC342_RS15910
BC342_RS15990	SM00382	ATPases associated with a variety of cellular activities
BC342_RS15990	SM00487	DEAD-like helicases superfamily
BC342_RS15990	SM00490	helicase superfamily c-terminal domain
BC342_RS15990	SM00847	Helicase associated domain (HA2)  Add an annotation
BC342_RS16010	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BC342_RS16050	SM01211	BC342_RS16050
BC342_RS16075	SM00382	ATPases associated with a variety of cellular activities
BC342_RS16090	SM00421	helix_turn_helix, Lux Regulon
BC342_RS16090	SM00448	cheY-homologous receiver domain
BC342_RS16115	SM01209	BC342_RS16115
BC342_RS16115	SM01210	BC342_RS16115
BC342_RS16120	SM00382	ATPases associated with a variety of cellular activities
BC342_RS16150	SM00822	BC342_RS16150
BC342_RS16160	SM01006	Siderophore biosynthesis protein domain
BC342_RS16230	SM00886	Stress responsive A/B Barrel Domain
BC342_RS16250	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS16260	SM00867	YceI-like domain 
BC342_RS16265	SM01012	BC342_RS16265
BC342_RS16270	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS16270	SM01012	BC342_RS16270
BC342_RS16310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS16310	SM00387	Histidine kinase-like ATPases
BC342_RS16310	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS16315	SM00448	cheY-homologous receiver domain
BC342_RS16315	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS16320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS16320	SM00895	BC342_RS16320
BC342_RS16330	SM00529	Helix-turn-helix diphteria tox regulatory element
BC342_RS16330	SM00899	BC342_RS16330
BC342_RS16375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS16375	SM00866	BC342_RS16375
BC342_RS16490	SM00942	Primase C terminal 1 (PriCT-1)
BC342_RS16490	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BC342_RS16530	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BC342_RS16535	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS16540	SM01011	Aminopeptidase P, N-terminal domain
BC342_RS16605	SM00382	ATPases associated with a variety of cellular activities
BC342_RS16615	SM00382	ATPases associated with a variety of cellular activities
BC342_RS16645	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS16645	SM00387	Histidine kinase-like ATPases
BC342_RS16670	SM00354	helix_turn _helix lactose operon repressor
BC342_RS16685	SM00327	von Willebrand factor (vWF) type A domain
BC342_RS16725	SM00226	Low molecular weight phosphatase family
BC342_RS16760	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS16775	SM00421	helix_turn_helix, Lux Regulon
BC342_RS16775	SM00448	cheY-homologous receiver domain
BC342_RS16790	SM00382	ATPases associated with a variety of cellular activities
BC342_RS16910	SM00470	ParB-like nuclease domain
BC342_RS16925	SM00393	Putative single-stranded nucleic acids-binding domain
BC342_RS16935	SM01234	BC342_RS16935
BC342_RS16945	SM00382	ATPases associated with a variety of cellular activities
BC342_RS16945	SM00760	Bacterial dnaA protein helix-turn-helix domain
BC342_RS16950	SM00480	DNA polymerase III beta subunit
BC342_RS16955	SM01350	BC342_RS16955
BC342_RS16970	SM00387	Histidine kinase-like ATPases
BC342_RS16970	SM00433	TopoisomeraseII
BC342_RS16975	SM00434	DNA Topoisomerase IV
BC342_RS17000	SM00320	WD40 repeats
BC342_RS17020	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS17080	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS17080	SM00740	BC342_RS17080
BC342_RS17095	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS17095	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BC342_RS17100	SM00240	Forkhead associated domain
BC342_RS17105	SM00240	Forkhead associated domain
BC342_RS17125	SM00450	Rhodanese Homology Domain
BC342_RS17135	SM00752	Horizontally Transferred TransMembrane Domain
BC342_RS17160	SM00344	helix_turn_helix ASNC type
BC342_RS17170	SM00861	Transketolase, pyrimidine binding domain
BC342_RS17185	SM00852	Probable molybdopterin binding domain
BC342_RS17200	SM00382	ATPases associated with a variety of cellular activities
BC342_RS17205	SM00829	Enoylreductase
BC342_RS17220	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS17220	SM00740	BC342_RS17220
BC342_RS17225	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS17235	SM00421	helix_turn_helix, Lux Regulon
BC342_RS17235	SM00448	cheY-homologous receiver domain
BC342_RS17245	SM00861	Transketolase, pyrimidine binding domain
BC342_RS17255	SM01040	BRO family, N-terminal domain
BC342_RS17320	SM01022	BC342_RS17320
BC342_RS17375	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS17435	SM00028	Tetratricopeptide repeats
BC342_RS17435	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS17440	SM00642	Alpha-amylase domain
BC342_RS17450	SM00710	Parallel beta-helix repeats
BC342_RS17450	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BC342_RS17490	SM01091	Transporter associated domain
BC342_RS17495	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS17510	SM00421	helix_turn_helix, Lux Regulon
BC342_RS17510	SM00448	cheY-homologous receiver domain
BC342_RS17515	SM00382	ATPases associated with a variety of cellular activities
BC342_RS17525	SM00422	helix_turn_helix, mercury resistance
BC342_RS17540	SM00382	ATPases associated with a variety of cellular activities
BC342_RS17550	SM00387	Histidine kinase-like ATPases
BC342_RS17555	SM00422	helix_turn_helix, mercury resistance
BC342_RS17560	SM00829	Enoylreductase
BC342_RS17595	SM00448	cheY-homologous receiver domain
BC342_RS17595	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS17600	SM00387	Histidine kinase-like ATPases
BC342_RS17600	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS17635	SM00487	DEAD-like helicases superfamily
BC342_RS17635	SM00490	helicase superfamily c-terminal domain
BC342_RS17640	SM00357	Cold shock protein domain
BC342_RS17650	SM00421	helix_turn_helix, Lux Regulon
BC342_RS17685	SM00382	ATPases associated with a variety of cellular activities
BC342_RS17695	SM00382	ATPases associated with a variety of cellular activities
BC342_RS17725	SM00829	Enoylreductase
BC342_RS17815	SM00091	PAS domain
BC342_RS17815	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS17850	SM00091	PAS domain
BC342_RS17850	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS17895	SM00271	DnaJ molecular chaperone homology domain
BC342_RS17900	SM00422	helix_turn_helix, mercury resistance
BC342_RS17910	SM00421	helix_turn_helix, Lux Regulon
BC342_RS17915	SM00421	helix_turn_helix, Lux Regulon
BC342_RS17920	SM00421	helix_turn_helix, Lux Regulon
BC342_RS17935	SM00382	ATPases associated with a variety of cellular activities
BC342_RS17935	SM01086	C-terminal, D2-small domain, of ClpB protein
BC342_RS17955	SM00020	Trypsin-like serine protease
BC342_RS18040	SM00421	helix_turn_helix, Lux Regulon
BC342_RS18040	SM00448	cheY-homologous receiver domain
BC342_RS18050	SM00421	helix_turn_helix, Lux Regulon
BC342_RS18050	SM00448	cheY-homologous receiver domain
BC342_RS18070	SM00382	ATPases associated with a variety of cellular activities
BC342_RS18085	SM00788	Adenylosuccinate synthetase
BC342_RS18105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS18105	SM00895	BC342_RS18105
BC342_RS18115	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS18130	SM00493	BC342_RS18130
BC342_RS18160	SM00960	Roadblock/LC7 domain
BC342_RS18165	SM00387	Histidine kinase-like ATPases
BC342_RS18175	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BC342_RS18205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS18210	SM00831	Cation transporter/ATPase, N-terminus
BC342_RS18235	SM00244	prohibitin homologues
BC342_RS18245	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS18270	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS18315	SM00382	ATPases associated with a variety of cellular activities
BC342_RS18320	SM00421	helix_turn_helix, Lux Regulon
BC342_RS18325	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS18325	SM01043	Bacterial transcriptional activator domain
BC342_RS18340	SM01260	BC342_RS18340
BC342_RS18350	SM00382	ATPases associated with a variety of cellular activities
BC342_RS18355	SM01260	BC342_RS18355
BC342_RS18370	SM00382	ATPases associated with a variety of cellular activities
BC342_RS18385	SM00382	ATPases associated with a variety of cellular activities
BC342_RS18470	SM00849	Metallo-beta-lactamase superfamily
BC342_RS18475	SM00100	Cyclic nucleotide-monophosphate binding domain
BC342_RS18475	SM00419	helix_turn_helix, cAMP Regulatory protein
BC342_RS18480	SM00478	endonuclease III
BC342_RS18480	SM00525	BC342_RS18480
BC342_RS18515	SM00947	Carbonic anhydrase
BC342_RS18580	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS18600	SM00823	Phosphopantetheine attachment site
BC342_RS18610	SM00823	Phosphopantetheine attachment site
BC342_RS18640	SM00823	Phosphopantetheine attachment site
BC342_RS18645	SM00824	Thioesterase
BC342_RS18655	SM00823	Phosphopantetheine attachment site
BC342_RS18655	SM01294	BC342_RS18655
BC342_RS18675	SM00823	Phosphopantetheine attachment site
BC342_RS18680	SM00861	Transketolase, pyrimidine binding domain
BC342_RS18715	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BC342_RS18735	SM00823	Phosphopantetheine attachment site
BC342_RS18740	SM00923	MbtH-like protein
BC342_RS18745	SM00822	BC342_RS18745
BC342_RS18745	SM00823	Phosphopantetheine attachment site
BC342_RS18745	SM00825	Beta-ketoacyl synthase
BC342_RS18745	SM00826	BC342_RS18745
BC342_RS18745	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS18745	SM01294	BC342_RS18745
BC342_RS18825	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS18900	SM00487	DEAD-like helicases superfamily
BC342_RS18900	SM00490	helicase superfamily c-terminal domain
BC342_RS18935	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BC342_RS18935	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BC342_RS18935	SM00493	BC342_RS18935
BC342_RS19005	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS19020	SM00420	helix_turn_helix, Deoxyribose operon repressor
BC342_RS19040	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS19055	SM00382	ATPases associated with a variety of cellular activities
BC342_RS19060	SM00382	ATPases associated with a variety of cellular activities
BC342_RS19070	SM00481	DNA polymerase alpha chain like domain
BC342_RS19180	SM00028	Tetratricopeptide repeats
BC342_RS19180	SM00382	ATPases associated with a variety of cellular activities
BC342_RS19200	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS19210	SM00886	Stress responsive A/B Barrel Domain
BC342_RS19220	SM00421	helix_turn_helix, Lux Regulon
BC342_RS19220	SM00448	cheY-homologous receiver domain
BC342_RS19225	SM00482	DNA polymerase A domain
BC342_RS19265	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BC342_RS19285	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS19300	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS19315	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS19330	SM00422	helix_turn_helix, mercury resistance
BC342_RS19375	SM00382	ATPases associated with a variety of cellular activities
BC342_RS19395	SM00905	Dihydroneopterin aldolase
BC342_RS19450	SM00421	helix_turn_helix, Lux Regulon
BC342_RS19450	SM00448	cheY-homologous receiver domain
BC342_RS19460	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS19530	SM00382	ATPases associated with a variety of cellular activities
BC342_RS19530	SM01086	C-terminal, D2-small domain, of ClpB protein
BC342_RS19565	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS19580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS19580	SM00387	Histidine kinase-like ATPases
BC342_RS19580	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS19585	SM00448	cheY-homologous receiver domain
BC342_RS19585	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS19615	SM00382	ATPases associated with a variety of cellular activities
BC342_RS19650	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS19650	SM00564	beta-propeller repeat
BC342_RS19675	SM00382	ATPases associated with a variety of cellular activities
BC342_RS19745	SM00563	Phosphate acyltransferases
BC342_RS19770	SM00881	CoA binding domain
BC342_RS19800	SM00829	Enoylreductase
BC342_RS19805	SM01004	Delta-aminolevulinic acid dehydratase
BC342_RS19825	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS19840	SM00836	DALR anticodon binding domain
BC342_RS19840	SM01016	Arginyl tRNA synthetase N terminal dom
BC342_RS19870	SM00822	BC342_RS19870
BC342_RS19890	SM00448	cheY-homologous receiver domain
BC342_RS19890	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS19895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS19895	SM00387	Histidine kinase-like ATPases
BC342_RS19895	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS19900	SM01043	Bacterial transcriptional activator domain
BC342_RS19955	SM00822	BC342_RS19955
BC342_RS20035	SM00829	Enoylreductase
BC342_RS20045	SM00226	Low molecular weight phosphatase family
BC342_RS20050	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS20065	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS20095	SM00855	Phosphoglycerate mutase family
BC342_RS20135	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS20175	SM00344	helix_turn_helix ASNC type
BC342_RS20215	SM00822	BC342_RS20215
BC342_RS20235	SM00357	Cold shock protein domain
BC342_RS20245	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS20250	SM00382	ATPases associated with a variety of cellular activities
BC342_RS20300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS20450	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS20485	SM01043	Bacterial transcriptional activator domain
BC342_RS20585	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BC342_RS20590	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BC342_RS20590	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BC342_RS20635	SM00341	Helicase and RNase D C-terminal
BC342_RS20635	SM00487	DEAD-like helicases superfamily
BC342_RS20635	SM00490	helicase superfamily c-terminal domain
BC342_RS20635	SM00956	BC342_RS20635
BC342_RS20640	SM00567	E-Z type HEAT repeats
BC342_RS20645	SM00382	ATPases associated with a variety of cellular activities
BC342_RS20730	SM00382	ATPases associated with a variety of cellular activities
BC342_RS20780	SM00421	helix_turn_helix, Lux Regulon
BC342_RS20780	SM00448	cheY-homologous receiver domain
BC342_RS20885	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BC342_RS20945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS21030	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BC342_RS21030	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BC342_RS21035	SM00649	Ribosomal protein L11/L12
BC342_RS21070	SM00663	RNA polymerase I subunit A N-terminus
BC342_RS21095	SM00838	Elongation factor G C-terminus
BC342_RS21095	SM00889	Elongation factor G, domain IV
BC342_RS21140	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS21145	SM00822	BC342_RS21145
BC342_RS21155	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BC342_RS21185	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS21205	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS21220	SM01403	BC342_RS21220
BC342_RS21240	SM01382	BC342_RS21240
BC342_RS21240	SM01383	BC342_RS21240
BC342_RS21255	SM00322	K homology RNA-binding domain
BC342_RS21275	SM01374	BC342_RS21275
BC342_RS21280	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BC342_RS21340	SM00316	Ribosomal protein S1-like RNA-binding domain
BC342_RS21360	SM00662	RNA polymerases D
BC342_RS21425	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS21445	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS21455	SM01005	Alanine racemase, C-terminal domain
BC342_RS21515	SM00354	helix_turn _helix lactose operon repressor
BC342_RS21550	SM00883	Chaperonin 10 Kd subunit
BC342_RS21585	SM00421	helix_turn_helix, Lux Regulon
BC342_RS21585	SM00448	cheY-homologous receiver domain
BC342_RS21595	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS21595	SM01240	BC342_RS21595
BC342_RS21600	SM01240	BC342_RS21600
BC342_RS21605	SM00984	UDP binding domain
BC342_RS21615	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS21620	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS21625	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS21630	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS21655	SM00830	Chorismate mutase type II
BC342_RS21670	SM01007	Class II Aldolase and Adducin N-terminal domain
BC342_RS21700	SM00421	helix_turn_helix, Lux Regulon
BC342_RS21700	SM00448	cheY-homologous receiver domain
BC342_RS21780	SM00881	CoA binding domain
BC342_RS21785	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS21805	SM00798	AICARFT/IMPCHase bienzyme
BC342_RS21805	SM00851	MGS-like domain
BC342_RS21810	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS21835	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS21875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS21915	SM00014	Acid phosphatase homologues
BC342_RS22130	SM00382	ATPases associated with a variety of cellular activities
BC342_RS22150	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BC342_RS22165	SM01130	BC342_RS22165
BC342_RS22170	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS22175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS22175	SM00895	BC342_RS22175
BC342_RS22245	SM00448	cheY-homologous receiver domain
BC342_RS22245	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS22265	SM00062	Bacterial periplasmic substrate-binding proteins
BC342_RS22265	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS22280	SM01133	BC342_RS22280
BC342_RS22310	SM00420	helix_turn_helix, Deoxyribose operon repressor
BC342_RS22310	SM01134	BC342_RS22310
BC342_RS22315	SM00878	Biotin carboxylase C-terminal domain
BC342_RS22345	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BC342_RS22360	SM00267	diguanylate cyclase
BC342_RS22395	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS22400	SM00829	Enoylreductase
BC342_RS22450	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS22460	SM00382	ATPases associated with a variety of cellular activities
BC342_RS22490	SM00028	Tetratricopeptide repeats
BC342_RS22530	SM01119	BC342_RS22530
BC342_RS22540	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS22580	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS22595	SM00636	BC342_RS22595
BC342_RS22605	SM00858	BC342_RS22605
BC342_RS22625	SM00382	ATPases associated with a variety of cellular activities
BC342_RS22710	SM00670	Large family of predicted nucleotide-binding domains
BC342_RS22745	SM00382	ATPases associated with a variety of cellular activities
BC342_RS22760	SM00244	prohibitin homologues
BC342_RS22770	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS22860	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS22865	SM00849	Metallo-beta-lactamase superfamily
BC342_RS22895	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS22905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS22905	SM00866	BC342_RS22905
BC342_RS22980	SM00382	ATPases associated with a variety of cellular activities
BC342_RS22985	SM00382	ATPases associated with a variety of cellular activities
BC342_RS22995	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS23015	SM00382	ATPases associated with a variety of cellular activities
BC342_RS23045	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS23170	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BC342_RS23195	SM00924	MgtE intracellular N domain
BC342_RS23230	SM00481	DNA polymerase alpha chain like domain
BC342_RS23250	SM00487	DEAD-like helicases superfamily
BC342_RS23250	SM00490	helicase superfamily c-terminal domain
BC342_RS23310	SM00450	Rhodanese Homology Domain
BC342_RS23445	SM00671	Sel1-like repeats.
BC342_RS23460	SM01060	BC342_RS23460
BC342_RS23495	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS23505	SM00882	Coenzyme A transferase
BC342_RS23510	SM00882	Coenzyme A transferase
BC342_RS23525	SM00116	Domain in cystathionine beta-synthase and other proteins.
BC342_RS23580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BC342_RS23610	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS23640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS23640	SM00866	BC342_RS23640
BC342_RS23670	SM00387	Histidine kinase-like ATPases
BC342_RS23680	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BC342_RS23700	SM00290	Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger
BC342_RS23715	SM00644	BC342_RS23715
BC342_RS23720	SM00100	Cyclic nucleotide-monophosphate binding domain
BC342_RS23740	SM00382	ATPases associated with a variety of cellular activities
BC342_RS23770	SM00382	ATPases associated with a variety of cellular activities
BC342_RS23780	SM00062	Bacterial periplasmic substrate-binding proteins
BC342_RS23785	SM00919	Malic enzyme, NAD binding domain
BC342_RS23785	SM01274	BC342_RS23785
BC342_RS23790	SM00829	Enoylreductase
BC342_RS23830	SM00382	ATPases associated with a variety of cellular activities
BC342_RS23855	SM00861	Transketolase, pyrimidine binding domain
BC342_RS23860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS23860	SM00387	Histidine kinase-like ATPases
BC342_RS23860	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS23865	SM00448	cheY-homologous receiver domain
BC342_RS23865	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS23875	SM00382	ATPases associated with a variety of cellular activities
BC342_RS23875	SM00464	Found in ATP-dependent protease La (LON)
BC342_RS23880	SM00641	Glycosyl hydrolases family 25
BC342_RS23885	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS23895	SM00387	Histidine kinase-like ATPases
BC342_RS23900	SM00960	Roadblock/LC7 domain
BC342_RS23960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS23960	SM00387	Histidine kinase-like ATPases
BC342_RS23960	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS23985	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BC342_RS24030	SM00825	Beta-ketoacyl synthase
BC342_RS24075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS24075	SM00895	BC342_RS24075
BC342_RS24135	SM00487	DEAD-like helicases superfamily
BC342_RS24160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS24160	SM00866	BC342_RS24160
BC342_RS24170	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24210	SM00448	cheY-homologous receiver domain
BC342_RS24215	SM01321	BC342_RS24215
BC342_RS24225	SM00836	DALR anticodon binding domain
BC342_RS24225	SM01016	Arginyl tRNA synthetase N terminal dom
BC342_RS24265	SM00937	BC342_RS24265
BC342_RS24280	SM00226	Low molecular weight phosphatase family
BC342_RS24330	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24345	SM00060	Fibronectin type 3 domain
BC342_RS24345	SM00636	BC342_RS24345
BC342_RS24345	SM00637	BC342_RS24345
BC342_RS24350	SM00421	helix_turn_helix, Lux Regulon
BC342_RS24350	SM00448	cheY-homologous receiver domain
BC342_RS24415	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24425	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24460	SM00448	cheY-homologous receiver domain
BC342_RS24460	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS24465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS24465	SM00387	Histidine kinase-like ATPases
BC342_RS24465	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS24470	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS24500	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS24515	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS24520	SM00829	Enoylreductase
BC342_RS24570	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS24590	SM00448	cheY-homologous receiver domain
BC342_RS24595	SM00387	Histidine kinase-like ATPases
BC342_RS24605	SM00422	helix_turn_helix, mercury resistance
BC342_RS24620	SM00642	Alpha-amylase domain
BC342_RS24630	SM00642	Alpha-amylase domain
BC342_RS24655	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24665	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24670	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24675	SM00642	Alpha-amylase domain
BC342_RS24705	SM00054	EF-hand, calcium binding motif
BC342_RS24710	SM00641	Glycosyl hydrolases family 25
BC342_RS24720	SM00421	helix_turn_helix, Lux Regulon
BC342_RS24720	SM00448	cheY-homologous receiver domain
BC342_RS24785	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24790	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24810	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24845	SM00422	helix_turn_helix, mercury resistance
BC342_RS24870	SM00644	BC342_RS24870
BC342_RS24890	SM00822	BC342_RS24890
BC342_RS24900	SM00292	breast cancer carboxy-terminal domain
BC342_RS24900	SM00532	Ligase N family
BC342_RS24905	SM00052	Putative diguanylate phosphodiesterase
BC342_RS24905	SM00267	diguanylate cyclase
BC342_RS24925	SM00845	GatB domain
BC342_RS24945	SM00382	ATPases associated with a variety of cellular activities
BC342_RS24945	SM00421	helix_turn_helix, Lux Regulon
BC342_RS24975	SM00052	Putative diguanylate phosphodiesterase
BC342_RS24975	SM00091	PAS domain
BC342_RS24975	SM00267	diguanylate cyclase
BC342_RS25025	SM01329	BC342_RS25025
BC342_RS25035	SM00917	LeuA allosteric (dimerisation) domain
BC342_RS25055	SM00867	YceI-like domain 
BC342_RS25085	SM00960	Roadblock/LC7 domain
BC342_RS25090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS25090	SM00387	Histidine kinase-like ATPases
BC342_RS25105	SM00960	Roadblock/LC7 domain
BC342_RS25110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS25110	SM00387	Histidine kinase-like ATPases
BC342_RS25130	SM00849	Metallo-beta-lactamase superfamily
BC342_RS25135	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS25170	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS25190	SM00411	bacterial (prokaryotic) histone like domain
BC342_RS25205	SM00563	Phosphate acyltransferases
BC342_RS25240	SM01120	BC342_RS25240
BC342_RS25240	SM01121	BC342_RS25240
BC342_RS25245	SM00487	DEAD-like helicases superfamily
BC342_RS25245	SM00490	helicase superfamily c-terminal domain
BC342_RS25275	SM00358	Double-stranded RNA binding motif
BC342_RS25275	SM00535	Ribonuclease III family
BC342_RS25280	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BC342_RS25280	SM01232	BC342_RS25280
BC342_RS25290	SM00849	Metallo-beta-lactamase superfamily
BC342_RS25295	SM00822	BC342_RS25295
BC342_RS25305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS25305	SM00866	BC342_RS25305
BC342_RS25410	SM00825	Beta-ketoacyl synthase
BC342_RS25420	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25420	SM00962	SRP54-type protein, GTPase domain
BC342_RS25420	SM00963	SRP54-type protein, helical bundle domain
BC342_RS25425	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BC342_RS25440	SM00938	Nitrogen regulatory protein P-II
BC342_RS25445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BC342_RS25450	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25450	SM00962	SRP54-type protein, GTPase domain
BC342_RS25450	SM00963	SRP54-type protein, helical bundle domain
BC342_RS25525	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25620	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25645	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25655	SM00344	helix_turn_helix ASNC type
BC342_RS25700	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25725	SM00060	Fibronectin type 3 domain
BC342_RS25725	SM00636	BC342_RS25725
BC342_RS25730	SM00014	Acid phosphatase homologues
BC342_RS25760	SM00354	helix_turn _helix lactose operon repressor
BC342_RS25775	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BC342_RS25820	SM00316	Ribosomal protein S1-like RNA-binding domain
BC342_RS25850	SM00904	Riboflavin kinase
BC342_RS25855	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25860	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25890	SM01387	BC342_RS25890
BC342_RS25895	SM00316	Ribosomal protein S1-like RNA-binding domain
BC342_RS25895	SM00322	K homology RNA-binding domain
BC342_RS25925	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
BC342_RS25925	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
BC342_RS25930	SM01130	BC342_RS25930
BC342_RS25935	SM00849	Metallo-beta-lactamase superfamily
BC342_RS25965	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS25965	SM00091	PAS domain
BC342_RS25965	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS25975	SM00448	cheY-homologous receiver domain
BC342_RS25980	SM00382	ATPases associated with a variety of cellular activities
BC342_RS25980	SM00843	BC342_RS25980
BC342_RS25990	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS26005	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS26015	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BC342_RS26015	SM01232	BC342_RS26015
BC342_RS26020	SM00382	ATPases associated with a variety of cellular activities
BC342_RS26020	SM00487	DEAD-like helicases superfamily
BC342_RS26020	SM00490	helicase superfamily c-terminal domain
BC342_RS26025	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS26055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS26055	SM00895	BC342_RS26055
BC342_RS26060	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS26075	SM00829	Enoylreductase
BC342_RS26085	SM00382	ATPases associated with a variety of cellular activities
BC342_RS26095	SM00450	Rhodanese Homology Domain
BC342_RS26120	SM00062	Bacterial periplasmic substrate-binding proteins
BC342_RS26125	SM00382	ATPases associated with a variety of cellular activities
BC342_RS26130	SM00448	cheY-homologous receiver domain
BC342_RS26130	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS26135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS26135	SM00387	Histidine kinase-like ATPases
BC342_RS26135	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS26155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS26160	SM00421	helix_turn_helix, Lux Regulon
BC342_RS26160	SM00448	cheY-homologous receiver domain
BC342_RS26200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BC342_RS26200	SM00954	Region found in RelA / SpoT proteins
BC342_RS26235	SM01006	Siderophore biosynthesis protein domain
BC342_RS26270	SM00855	Phosphoglycerate mutase family
BC342_RS26305	SM00487	DEAD-like helicases superfamily
BC342_RS26305	SM00490	helicase superfamily c-terminal domain
BC342_RS26320	SM00382	ATPases associated with a variety of cellular activities
BC342_RS26325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS26325	SM00895	BC342_RS26325
BC342_RS26335	SM00020	Trypsin-like serine protease
BC342_RS26345	SM00387	Histidine kinase-like ATPases
BC342_RS26345	SM00433	TopoisomeraseII
BC342_RS26355	SM00387	Histidine kinase-like ATPases
BC342_RS26360	SM00421	helix_turn_helix, Lux Regulon
BC342_RS26360	SM00448	cheY-homologous receiver domain
BC342_RS26375	SM00448	cheY-homologous receiver domain
BC342_RS26380	SM00387	Histidine kinase-like ATPases
BC342_RS26425	SM00822	BC342_RS26425
BC342_RS26450	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BC342_RS26455	SM00434	DNA Topoisomerase IV
BC342_RS26475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS26475	SM00895	BC342_RS26475
BC342_RS26485	SM00881	CoA binding domain
BC342_RS26510	SM00450	Rhodanese Homology Domain
BC342_RS26545	SM00448	cheY-homologous receiver domain
BC342_RS26545	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS26550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS26550	SM00387	Histidine kinase-like ATPases
BC342_RS26550	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS26580	SM00382	ATPases associated with a variety of cellular activities
BC342_RS26585	SM00387	Histidine kinase-like ATPases
BC342_RS26585	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS26590	SM00448	cheY-homologous receiver domain
BC342_RS26590	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS26630	SM00421	helix_turn_helix, Lux Regulon
BC342_RS26630	SM00448	cheY-homologous receiver domain
BC342_RS26645	SM00823	Phosphopantetheine attachment site
BC342_RS26650	SM00823	Phosphopantetheine attachment site
BC342_RS26650	SM00825	Beta-ketoacyl synthase
BC342_RS26650	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS26660	SM00823	Phosphopantetheine attachment site
BC342_RS26665	SM00824	Thioesterase
BC342_RS26680	SM00421	helix_turn_helix, Lux Regulon
BC342_RS26690	SM00822	BC342_RS26690
BC342_RS26745	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS26765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS26765	SM00895	BC342_RS26765
BC342_RS26775	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS26790	SM01149	BC342_RS26790
BC342_RS26795	SM00354	helix_turn _helix lactose operon repressor
BC342_RS26845	SM00923	MbtH-like protein
BC342_RS26850	SM00823	Phosphopantetheine attachment site
BC342_RS26865	SM00829	Enoylreductase
BC342_RS26905	SM00829	Enoylreductase
BC342_RS26915	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS26925	SM00829	Enoylreductase
BC342_RS26945	SM00421	helix_turn_helix, Lux Regulon
BC342_RS26945	SM00448	cheY-homologous receiver domain
BC342_RS26975	SM00382	ATPases associated with a variety of cellular activities
BC342_RS27115	SM00421	helix_turn_helix, Lux Regulon
BC342_RS27120	SM00421	helix_turn_helix, Lux Regulon
BC342_RS27170	SM00421	helix_turn_helix, Lux Regulon
BC342_RS27180	SM00861	Transketolase, pyrimidine binding domain
BC342_RS27190	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS27195	SM00903	Flavin reductase like domain
BC342_RS27205	SM00829	Enoylreductase
BC342_RS27240	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS27260	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS27295	SM00382	ATPases associated with a variety of cellular activities
BC342_RS27305	SM00861	Transketolase, pyrimidine binding domain
BC342_RS27335	SM00341	Helicase and RNase D C-terminal
BC342_RS27335	SM00474	3'-5' exonuclease
BC342_RS27340	SM00421	helix_turn_helix, Lux Regulon
BC342_RS27390	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS27390	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS27395	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS27415	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS27465	SM00382	ATPases associated with a variety of cellular activities
BC342_RS27480	SM00829	Enoylreductase
BC342_RS27510	SM00947	Carbonic anhydrase
BC342_RS27550	SM00028	Tetratricopeptide repeats
BC342_RS27550	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS27550	SM01043	Bacterial transcriptional activator domain
BC342_RS27565	SM00028	Tetratricopeptide repeats
BC342_RS27570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS27570	SM00387	Histidine kinase-like ATPases
BC342_RS27570	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS27575	SM00448	cheY-homologous receiver domain
BC342_RS27575	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS27585	SM00900	BC342_RS27585
BC342_RS27595	SM00382	ATPases associated with a variety of cellular activities
BC342_RS27625	SM00960	Roadblock/LC7 domain
BC342_RS27630	SM00387	Histidine kinase-like ATPases
BC342_RS27685	SM00642	Alpha-amylase domain
BC342_RS27690	SM00240	Forkhead associated domain
BC342_RS27705	SM00642	Alpha-amylase domain
BC342_RS27740	SM00650	Ribosomal RNA adenine dimethylases
BC342_RS27765	SM00382	ATPases associated with a variety of cellular activities
BC342_RS27835	SM00382	ATPases associated with a variety of cellular activities
BC342_RS27865	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS27890	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS27950	SM00421	helix_turn_helix, Lux Regulon
BC342_RS27950	SM00448	cheY-homologous receiver domain
BC342_RS27970	SM00637	BC342_RS27970
BC342_RS27990	SM00421	helix_turn_helix, Lux Regulon
BC342_RS28025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS28025	SM00895	BC342_RS28025
BC342_RS28040	SM00421	helix_turn_helix, Lux Regulon
BC342_RS28040	SM00448	cheY-homologous receiver domain
BC342_RS28045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS28045	SM00387	Histidine kinase-like ATPases
BC342_RS28080	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BC342_RS28090	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BC342_RS28190	SM00320	WD40 repeats
BC342_RS28235	SM00020	Trypsin-like serine protease
BC342_RS28240	SM00382	ATPases associated with a variety of cellular activities
BC342_RS28240	SM00421	helix_turn_helix, Lux Regulon
BC342_RS28245	SM00421	helix_turn_helix, Lux Regulon
BC342_RS28280	SM00020	Trypsin-like serine protease
BC342_RS28280	SM00191	Integrin alpha (beta-propellor repeats).
BC342_RS28355	SM00855	Phosphoglycerate mutase family
BC342_RS28375	SM00327	von Willebrand factor (vWF) type A domain
BC342_RS28390	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS28440	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS28470	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS28490	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS28525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS28525	SM00866	BC342_RS28525
BC342_RS28540	SM00382	ATPases associated with a variety of cellular activities
BC342_RS28555	SM00487	DEAD-like helicases superfamily
BC342_RS28555	SM00490	helicase superfamily c-terminal domain
BC342_RS28565	SM00421	helix_turn_helix, Lux Regulon
BC342_RS28565	SM00448	cheY-homologous receiver domain
BC342_RS28580	SM00824	Thioesterase
BC342_RS28600	SM00382	ATPases associated with a variety of cellular activities
BC342_RS28625	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BC342_RS28640	SM00829	Enoylreductase
BC342_RS28720	SM00382	ATPases associated with a variety of cellular activities
BC342_RS28765	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS28780	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS28805	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS28815	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS28825	SM00822	BC342_RS28825
BC342_RS28845	SM00849	Metallo-beta-lactamase superfamily
BC342_RS28875	SM00382	ATPases associated with a variety of cellular activities
BC342_RS28875	SM01086	C-terminal, D2-small domain, of ClpB protein
BC342_RS28885	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS28925	SM00060	Fibronectin type 3 domain
BC342_RS28925	SM00606	Cellulose Binding Domain Type IV
BC342_RS28940	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS28960	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS28960	SM01043	Bacterial transcriptional activator domain
BC342_RS28970	SM00421	helix_turn_helix, Lux Regulon
BC342_RS29065	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS29080	SM00861	Transketolase, pyrimidine binding domain
BC342_RS29155	SM00506	Appr-1"-p processing enzyme
BC342_RS29160	SM00823	Phosphopantetheine attachment site
BC342_RS29160	SM00824	Thioesterase
BC342_RS29200	SM01130	BC342_RS29200
BC342_RS29205	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS29220	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS29230	SM00560	LamG-like jellyroll fold domain
BC342_RS29230	SM01038	Beta galactosidase small chain
BC342_RS29235	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS29245	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS29245	SM00478	endonuclease III
BC342_RS29245	SM01009	AlkA N-terminal domain
BC342_RS29295	SM00829	Enoylreductase
BC342_RS29310	SM00567	E-Z type HEAT repeats
BC342_RS29345	SM00091	PAS domain
BC342_RS29345	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS29410	SM00861	Transketolase, pyrimidine binding domain
BC342_RS29475	SM00014	Acid phosphatase homologues
BC342_RS29475	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BC342_RS29480	SM00382	ATPases associated with a variety of cellular activities
BC342_RS29510	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS29570	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS29585	SM00637	BC342_RS29585
BC342_RS29635	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BC342_RS29640	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BC342_RS29665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS29665	SM00895	BC342_RS29665
BC342_RS29675	SM00382	ATPases associated with a variety of cellular activities
BC342_RS29695	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BC342_RS29695	SM00606	Cellulose Binding Domain Type IV
BC342_RS29745	SM00881	CoA binding domain
BC342_RS29765	SM00881	CoA binding domain
BC342_RS29790	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
BC342_RS29800	SM00354	helix_turn _helix lactose operon repressor
BC342_RS29875	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS29880	SM00382	ATPases associated with a variety of cellular activities
BC342_RS29890	SM00062	Bacterial periplasmic substrate-binding proteins
BC342_RS29890	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BC342_RS29905	SM00822	BC342_RS29905
BC342_RS29940	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS30050	SM01350	BC342_RS30050
BC342_RS30075	SM00861	Transketolase, pyrimidine binding domain
BC342_RS30080	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS30085	SM00606	Cellulose Binding Domain Type IV
BC342_RS30115	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS30150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS30150	SM00895	BC342_RS30150
BC342_RS30205	SM00998	Adenylosuccinate lyase C-terminus
BC342_RS30220	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS30260	SM00354	helix_turn _helix lactose operon repressor
BC342_RS30290	SM00382	ATPases associated with a variety of cellular activities
BC342_RS30355	SM00506	Appr-1"-p processing enzyme
BC342_RS30365	SM00631	BC342_RS30365
BC342_RS30380	SM00382	ATPases associated with a variety of cellular activities
BC342_RS30385	SM00316	Ribosomal protein S1-like RNA-binding domain
BC342_RS30385	SM00732	Likely ribonuclease with RNase H fold.
BC342_RS30395	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS30455	SM00382	ATPases associated with a variety of cellular activities
BC342_RS30490	SM00729	Elongator protein 3, MiaB family, Radical SAM
BC342_RS30500	SM00861	Transketolase, pyrimidine binding domain
BC342_RS30510	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS30525	SM00257	Lysin motif
BC342_RS30555	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS30590	SM00382	ATPases associated with a variety of cellular activities
BC342_RS30600	SM00823	Phosphopantetheine attachment site
BC342_RS30625	SM00824	Thioesterase
BC342_RS30635	SM00382	ATPases associated with a variety of cellular activities
BC342_RS30640	SM00382	ATPases associated with a variety of cellular activities
BC342_RS30655	SM00450	Rhodanese Homology Domain
BC342_RS30725	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS30730	SM00829	Enoylreductase
BC342_RS30790	SM00478	endonuclease III
BC342_RS30835	SM00448	cheY-homologous receiver domain
BC342_RS30835	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS30840	SM00387	Histidine kinase-like ATPases
BC342_RS30840	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS30890	SM00822	BC342_RS30890
BC342_RS30910	SM00923	MbtH-like protein
BC342_RS30945	SM00382	ATPases associated with a variety of cellular activities
BC342_RS30950	SM00823	Phosphopantetheine attachment site
BC342_RS30980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS30980	SM00866	BC342_RS30980
BC342_RS31015	SM00382	ATPases associated with a variety of cellular activities
BC342_RS31040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS31040	SM00895	BC342_RS31040
BC342_RS31080	SM00829	Enoylreductase
BC342_RS31085	SM00829	Enoylreductase
BC342_RS31120	SM00822	BC342_RS31120
BC342_RS31120	SM00823	Phosphopantetheine attachment site
BC342_RS31120	SM00825	Beta-ketoacyl synthase
BC342_RS31120	SM00826	BC342_RS31120
BC342_RS31120	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS31120	SM01294	BC342_RS31120
BC342_RS31125	SM00822	BC342_RS31125
BC342_RS31125	SM00823	Phosphopantetheine attachment site
BC342_RS31125	SM00825	Beta-ketoacyl synthase
BC342_RS31125	SM00826	BC342_RS31125
BC342_RS31125	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS31125	SM00829	Enoylreductase
BC342_RS31125	SM01294	BC342_RS31125
BC342_RS31130	SM00822	BC342_RS31130
BC342_RS31130	SM00823	Phosphopantetheine attachment site
BC342_RS31130	SM00825	Beta-ketoacyl synthase
BC342_RS31130	SM00826	BC342_RS31130
BC342_RS31130	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS31130	SM01294	BC342_RS31130
BC342_RS31135	SM00825	Beta-ketoacyl synthase
BC342_RS31135	SM00826	BC342_RS31135
BC342_RS31135	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS31140	SM00822	BC342_RS31140
BC342_RS31140	SM00823	Phosphopantetheine attachment site
BC342_RS31140	SM00829	Enoylreductase
BC342_RS31140	SM01294	BC342_RS31140
BC342_RS31145	SM00822	BC342_RS31145
BC342_RS31145	SM00823	Phosphopantetheine attachment site
BC342_RS31145	SM00825	Beta-ketoacyl synthase
BC342_RS31145	SM00826	BC342_RS31145
BC342_RS31145	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS31145	SM01294	BC342_RS31145
BC342_RS31170	SM00829	Enoylreductase
BC342_RS31185	SM00421	helix_turn_helix, Lux Regulon
BC342_RS31225	SM00235	Zinc-dependent metalloprotease
BC342_RS31230	SM00421	helix_turn_helix, Lux Regulon
BC342_RS31305	SM00382	ATPases associated with a variety of cellular activities
BC342_RS31310	SM00642	Alpha-amylase domain
BC342_RS31330	SM00354	helix_turn _helix lactose operon repressor
BC342_RS31335	SM00060	Fibronectin type 3 domain
BC342_RS31335	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
BC342_RS31335	SM00710	Parallel beta-helix repeats
BC342_RS31340	SM00354	helix_turn _helix lactose operon repressor
BC342_RS31360	SM01120	BC342_RS31360
BC342_RS31375	SM01130	BC342_RS31375
BC342_RS31380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS31380	SM00895	BC342_RS31380
BC342_RS31410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS31410	SM00895	BC342_RS31410
BC342_RS31425	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS31500	SM01350	BC342_RS31500
BC342_RS31515	SM00257	Lysin motif
BC342_RS31570	SM00354	helix_turn _helix lactose operon repressor
BC342_RS31595	SM00872	Alpha mannosidase, middle domain
BC342_RS31605	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BC342_RS31605	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS31630	SM00854	Bacterial capsule synthesis protein PGA_cap
BC342_RS31635	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS31690	SM00052	Putative diguanylate phosphodiesterase
BC342_RS31690	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BC342_RS31690	SM00091	PAS domain
BC342_RS31690	SM00267	diguanylate cyclase
BC342_RS31730	SM00563	Phosphate acyltransferases
BC342_RS31740	SM00382	ATPases associated with a variety of cellular activities
BC342_RS31810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS31885	SM00354	helix_turn _helix lactose operon repressor
BC342_RS31920	SM00091	PAS domain
BC342_RS31920	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS31930	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS31930	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS31940	SM00796	Allophanate hydrolase subunit 1
BC342_RS31940	SM00797	Allophanate hydrolase subunit 2
BC342_RS31940	SM00878	Biotin carboxylase C-terminal domain
BC342_RS31950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS31950	SM00895	BC342_RS31950
BC342_RS31955	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS31970	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS31980	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS31980	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS31990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS31995	SM00382	ATPases associated with a variety of cellular activities
BC342_RS32005	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS32085	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS32090	SM00382	ATPases associated with a variety of cellular activities
BC342_RS32120	SM00014	Acid phosphatase homologues
BC342_RS32185	SM00710	Parallel beta-helix repeats
BC342_RS32185	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BC342_RS32195	SM00829	Enoylreductase
BC342_RS32220	SM00984	UDP binding domain
BC342_RS32240	SM00421	helix_turn_helix, Lux Regulon
BC342_RS32255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS32255	SM00895	BC342_RS32255
BC342_RS32260	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BC342_RS32285	SM00829	Enoylreductase
BC342_RS32320	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS32375	SM00495	Chitin-binding domain type 3
BC342_RS32420	SM01007	Class II Aldolase and Adducin N-terminal domain
BC342_RS32430	SM00382	ATPases associated with a variety of cellular activities
BC342_RS32455	SM00354	helix_turn _helix lactose operon repressor
BC342_RS32540	SM00458	Ricin-type beta-trefoil
BC342_RS32560	SM00829	Enoylreductase
BC342_RS32565	SM00387	Histidine kinase-like ATPases
BC342_RS32570	SM00960	Roadblock/LC7 domain
BC342_RS32640	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS32640	SM00091	PAS domain
BC342_RS32640	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS32645	SM00458	Ricin-type beta-trefoil
BC342_RS32660	SM00704	CDGSH-type zinc finger. Function unknown.
BC342_RS32670	SM01236	BC342_RS32670
BC342_RS32685	SM00382	ATPases associated with a variety of cellular activities
BC342_RS32690	SM00382	ATPases associated with a variety of cellular activities
BC342_RS32710	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS32710	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS32740	SM00829	Enoylreductase
BC342_RS32745	SM00849	Metallo-beta-lactamase superfamily
BC342_RS32775	SM00020	Trypsin-like serine protease
BC342_RS32795	SM00903	Flavin reductase like domain
BC342_RS32840	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS32865	SM00421	helix_turn_helix, Lux Regulon
BC342_RS32875	SM00382	ATPases associated with a variety of cellular activities
BC342_RS32880	SM00382	ATPases associated with a variety of cellular activities
BC342_RS32905	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS32925	SM00382	ATPases associated with a variety of cellular activities
BC342_RS32960	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BC342_RS32965	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BC342_RS32995	SM00960	Roadblock/LC7 domain
BC342_RS33025	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS33025	SM00091	PAS domain
BC342_RS33025	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS33030	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS33030	SM00091	PAS domain
BC342_RS33030	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS33070	SM01060	BC342_RS33070
BC342_RS33105	SM00420	helix_turn_helix, Deoxyribose operon repressor
BC342_RS33120	SM00822	BC342_RS33120
BC342_RS33150	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
BC342_RS33165	SM00382	ATPases associated with a variety of cellular activities
BC342_RS33175	SM00382	ATPases associated with a variety of cellular activities
BC342_RS33285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS33285	SM00866	BC342_RS33285
BC342_RS33310	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS33360	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BC342_RS33395	SM00641	Glycosyl hydrolases family 25
BC342_RS33400	SM00387	Histidine kinase-like ATPases
BC342_RS33405	SM00960	Roadblock/LC7 domain
BC342_RS33440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS33440	SM00895	BC342_RS33440
BC342_RS33495	SM00773	Proposed nucleic acid binding domain
BC342_RS33540	SM00448	cheY-homologous receiver domain
BC342_RS33540	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS33545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS33545	SM00387	Histidine kinase-like ATPases
BC342_RS33545	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS33565	SM00880	BC342_RS33565
BC342_RS33565	SM01118	BC342_RS33565
BC342_RS33575	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BC342_RS33575	SM00091	PAS domain
BC342_RS33575	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS33625	SM00357	Cold shock protein domain
BC342_RS33645	SM00822	BC342_RS33645
BC342_RS33650	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS33695	SM00758	BC342_RS33695
BC342_RS33735	SM00382	ATPases associated with a variety of cellular activities
BC342_RS33745	SM00382	ATPases associated with a variety of cellular activities
BC342_RS33750	SM00823	Phosphopantetheine attachment site
BC342_RS33765	SM00923	MbtH-like protein
BC342_RS33775	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS33810	SM00422	helix_turn_helix, mercury resistance
BC342_RS33830	SM00382	ATPases associated with a variety of cellular activities
BC342_RS33915	SM01217	BC342_RS33915
BC342_RS33925	SM00354	helix_turn _helix lactose operon repressor
BC342_RS33950	SM00331	Sigma factor PP2C-like phosphatases
BC342_RS33985	SM00346	helix_turn_helix isocitrate lyase regulation
BC342_RS34000	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS34020	SM00797	Allophanate hydrolase subunit 2
BC342_RS34025	SM00796	Allophanate hydrolase subunit 1
BC342_RS34070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BC342_RS34070	SM00866	BC342_RS34070
BC342_RS34160	SM00354	helix_turn _helix lactose operon repressor
BC342_RS34205	SM00829	Enoylreductase
BC342_RS34215	SM00382	ATPases associated with a variety of cellular activities
BC342_RS34230	SM00448	cheY-homologous receiver domain
BC342_RS34230	SM00862	Transcriptional regulatory protein, C terminal
BC342_RS34235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BC342_RS34235	SM00387	Histidine kinase-like ATPases
BC342_RS34235	SM00388	His Kinase A (phosphoacceptor) domain
BC342_RS34315	SM00354	helix_turn _helix lactose operon repressor
BC342_RS34335	SM00822	BC342_RS34335
BC342_RS34355	SM00354	helix_turn _helix lactose operon repressor
BC342_RS34410	SM00054	EF-hand, calcium binding motif
BC342_RS34430	SM00421	helix_turn_helix, Lux Regulon
BC342_RS34440	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS34445	SM00347	helix_turn_helix multiple antibiotic resistance protein
BC342_RS34455	SM00829	Enoylreductase
BC342_RS34460	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS34465	SM00240	Forkhead associated domain
BC342_RS34475	SM00824	Thioesterase
BC342_RS34500	SM00421	helix_turn_helix, Lux Regulon
BC342_RS34515	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BC342_RS34540	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
BC342_RS34545	SM00823	Phosphopantetheine attachment site
BC342_RS34545	SM00824	Thioesterase
BC342_RS34545	SM00825	Beta-ketoacyl synthase
BC342_RS34545	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS34545	SM01294	BC342_RS34545
BC342_RS34565	SM00822	BC342_RS34565
BC342_RS34565	SM00823	Phosphopantetheine attachment site
BC342_RS34565	SM00825	Beta-ketoacyl synthase
BC342_RS34565	SM00826	BC342_RS34565
BC342_RS34565	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BC342_RS34565	SM01294	BC342_RS34565
BC342_RS34620	SM00829	Enoylreductase
BC342_RS34720	SM00220	Serine/Threonine protein kinases, catalytic domain
BC342_RS34745	SM00490	helicase superfamily c-terminal domain
BC342_RS34775	SM01101	BC342_RS34775
BC342_RS34845	SM00560	LamG-like jellyroll fold domain
BC342_RS34880	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS34940	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS35005	SM00849	Metallo-beta-lactamase superfamily
BC342_RS35045	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS35075	SM00342	helix_turn_helix, arabinose operon control protein
BC342_RS35135	SM00530	Helix-turn-helix XRE-family like proteins 
BC342_RS35160	SM00491	BC342_RS35160
